Query 020805
Match_columns 321
No_of_seqs 173 out of 1229
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 08:26:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020805.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020805hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vc3_A Beta-cyanoalnine syntha 100.0 5E-69 1.7E-73 498.5 33.8 310 6-315 23-338 (344)
2 4aec_A Cysteine synthase, mito 100.0 2.2E-67 7.6E-72 496.5 32.4 298 4-301 109-406 (430)
3 3tbh_A O-acetyl serine sulfhyd 100.0 7.8E-67 2.7E-71 482.4 33.0 298 7-305 10-308 (334)
4 1z7w_A Cysteine synthase; tran 100.0 6.1E-66 2.1E-70 474.9 34.0 296 7-302 4-299 (322)
5 2q3b_A Cysteine synthase A; py 100.0 4.3E-65 1.5E-69 467.5 33.6 302 4-306 2-304 (313)
6 2v03_A Cysteine synthase B; py 100.0 2.8E-64 9.7E-69 459.9 33.4 282 10-302 2-283 (303)
7 3dwg_A Cysteine synthase B; su 100.0 6.4E-65 2.2E-69 468.1 28.8 287 6-301 3-298 (325)
8 2pqm_A Cysteine synthase; OASS 100.0 1E-64 3.6E-69 470.0 29.8 297 4-302 9-310 (343)
9 1y7l_A O-acetylserine sulfhydr 100.0 1.2E-64 4.1E-69 465.2 29.6 293 7-302 2-302 (316)
10 2egu_A Cysteine synthase; O-ac 100.0 9.2E-65 3.2E-69 464.4 26.1 293 7-302 3-295 (308)
11 1ve1_A O-acetylserine sulfhydr 100.0 1.2E-63 4E-68 456.2 31.3 289 11-302 2-292 (304)
12 1o58_A O-acetylserine sulfhydr 100.0 1.9E-62 6.5E-67 447.9 29.0 283 11-302 13-296 (303)
13 1jbq_A B, cystathionine beta-s 100.0 1.9E-61 6.6E-66 458.3 36.0 307 7-315 97-419 (435)
14 3l6b_A Serine racemase; pyrido 100.0 1.1E-62 3.8E-67 456.8 22.0 299 8-312 15-326 (346)
15 3pc3_A CG1753, isoform A; CBS, 100.0 1.8E-60 6E-65 465.4 34.7 306 6-313 48-369 (527)
16 2gn0_A Threonine dehydratase c 100.0 1.4E-62 4.7E-67 455.8 18.6 296 8-313 30-338 (342)
17 4h27_A L-serine dehydratase/L- 100.0 2.6E-60 9E-65 443.5 29.0 295 11-313 39-354 (364)
18 1v71_A Serine racemase, hypoth 100.0 3.2E-61 1.1E-65 443.6 21.8 293 8-312 16-321 (323)
19 1ve5_A Threonine deaminase; ri 100.0 2.9E-61 9.9E-66 441.8 21.0 286 7-306 9-310 (311)
20 3iau_A Threonine deaminase; py 100.0 6.1E-61 2.1E-65 448.4 20.1 296 10-314 52-359 (366)
21 1p5j_A L-serine dehydratase; l 100.0 4.6E-60 1.6E-64 442.9 25.5 295 8-310 36-351 (372)
22 1tdj_A Biosynthetic threonine 100.0 2.7E-60 9.3E-65 456.4 24.5 290 11-309 24-325 (514)
23 2rkb_A Serine dehydratase-like 100.0 1.7E-59 5.7E-64 431.4 26.5 291 14-313 3-314 (318)
24 1f2d_A 1-aminocyclopropane-1-c 100.0 2.5E-60 8.5E-65 440.8 17.1 301 7-313 4-337 (341)
25 2zsj_A Threonine synthase; PLP 100.0 5.2E-59 1.8E-63 433.6 25.9 295 9-313 21-334 (352)
26 2d1f_A Threonine synthase; ami 100.0 3.2E-59 1.1E-63 436.1 24.4 294 10-312 30-340 (360)
27 4d9b_A D-cysteine desulfhydras 100.0 7.8E-60 2.7E-64 437.3 19.2 296 8-309 22-339 (342)
28 3aey_A Threonine synthase; PLP 100.0 9.8E-59 3.3E-63 431.6 26.5 292 10-311 20-330 (351)
29 1j0a_A 1-aminocyclopropane-1-c 100.0 6.5E-60 2.2E-64 435.3 18.1 300 5-312 8-321 (325)
30 3ss7_X D-serine dehydratase; t 100.0 2.4E-58 8.1E-63 439.9 26.1 298 13-313 73-438 (442)
31 4d9i_A Diaminopropionate ammon 100.0 1.2E-57 4E-62 430.8 25.4 298 14-314 40-391 (398)
32 1tzj_A ACC deaminase, 1-aminoc 100.0 1.7E-57 5.7E-62 421.5 16.7 299 7-312 4-335 (338)
33 1wkv_A Cysteine synthase; homo 100.0 5.4E-55 1.8E-59 409.3 28.5 288 9-311 84-381 (389)
34 1x1q_A Tryptophan synthase bet 100.0 4.7E-53 1.6E-57 401.3 22.8 294 14-312 72-414 (418)
35 1v8z_A Tryptophan synthase bet 100.0 1.6E-52 5.5E-57 395.0 26.2 298 8-312 39-385 (388)
36 1qop_B Tryptophan synthase bet 100.0 5.9E-53 2E-57 398.6 22.7 297 10-312 46-390 (396)
37 1e5x_A Threonine synthase; thr 100.0 1.6E-52 5.4E-57 403.6 23.7 292 12-313 124-446 (486)
38 2o2e_A Tryptophan synthase bet 100.0 4.4E-51 1.5E-55 387.6 24.6 295 12-312 74-416 (422)
39 1vb3_A Threonine synthase; PLP 100.0 7.4E-45 2.5E-49 345.7 22.1 271 17-311 82-388 (428)
40 1kl7_A Threonine synthase; thr 100.0 1.2E-41 4E-46 328.1 24.8 286 15-312 93-462 (514)
41 4f4f_A Threonine synthase; str 100.0 2.8E-41 9.5E-46 321.8 22.2 272 18-311 93-426 (468)
42 3v7n_A Threonine synthase; ssg 100.0 9E-39 3.1E-43 304.6 20.8 277 19-312 103-447 (487)
43 3fwz_A Inner membrane protein 94.9 0.42 1.4E-05 36.9 11.6 97 71-209 8-105 (140)
44 1vp8_A Hypothetical protein AF 91.0 2.2 7.4E-05 35.0 10.1 77 43-125 22-107 (201)
45 3l9w_A Glutathione-regulated p 89.3 3.9 0.00013 37.8 11.9 51 71-124 5-55 (413)
46 3jyn_A Quinone oxidoreductase; 88.9 2.8 9.7E-05 37.1 10.4 58 62-122 134-191 (325)
47 3qwb_A Probable quinone oxidor 88.2 4 0.00014 36.2 11.0 59 62-123 142-200 (334)
48 3s2e_A Zinc-containing alcohol 88.1 4.7 0.00016 35.8 11.4 61 59-123 157-217 (340)
49 3c85_A Putative glutathione-re 87.9 8.8 0.0003 30.5 12.6 95 72-208 41-138 (183)
50 4b7c_A Probable oxidoreductase 87.5 4.2 0.00014 36.1 10.6 57 62-121 143-200 (336)
51 4dup_A Quinone oxidoreductase; 87.1 3.9 0.00013 36.6 10.3 57 62-121 161-217 (353)
52 3uog_A Alcohol dehydrogenase; 86.4 4.8 0.00017 36.2 10.6 57 62-122 183-239 (363)
53 3tqh_A Quinone oxidoreductase; 86.1 4.6 0.00016 35.6 10.0 61 59-123 143-203 (321)
54 3gaz_A Alcohol dehydrogenase s 86.0 6.1 0.00021 35.2 10.9 54 62-119 144-197 (343)
55 4a2c_A Galactitol-1-phosphate 86.0 6.8 0.00023 34.7 11.2 62 60-124 152-213 (346)
56 2c0c_A Zinc binding alcohol de 85.1 6.3 0.00021 35.4 10.6 57 62-121 157-213 (362)
57 3gqv_A Enoyl reductase; medium 85.1 3 0.0001 37.7 8.5 53 67-123 163-215 (371)
58 4ej6_A Putative zinc-binding d 85.0 10 0.00036 34.1 12.1 60 60-122 174-233 (370)
59 4eye_A Probable oxidoreductase 84.9 4.5 0.00015 36.1 9.4 57 62-121 153-209 (342)
60 3gms_A Putative NADPH:quinone 84.8 4.4 0.00015 36.0 9.3 59 61-122 137-195 (340)
61 1kol_A Formaldehyde dehydrogen 84.5 9.6 0.00033 34.6 11.7 57 60-119 177-233 (398)
62 3iup_A Putative NADPH:quinone 83.6 5.4 0.00019 36.1 9.5 52 69-123 171-223 (379)
63 3fpc_A NADP-dependent alcohol 83.4 6.3 0.00022 35.2 9.8 59 59-121 157-216 (352)
64 1zsy_A Mitochondrial 2-enoyl t 82.9 6.2 0.00021 35.3 9.5 60 62-121 161-221 (357)
65 2j8z_A Quinone oxidoreductase; 82.3 11 0.00036 33.8 10.9 57 62-121 156-212 (354)
66 1gu7_A Enoyl-[acyl-carrier-pro 82.3 6.1 0.00021 35.4 9.3 62 60-121 157-221 (364)
67 2eih_A Alcohol dehydrogenase; 82.0 10 0.00035 33.6 10.6 58 60-120 157-215 (343)
68 1v3u_A Leukotriene B4 12- hydr 81.7 14 0.00048 32.5 11.4 55 62-119 139-193 (333)
69 1yb5_A Quinone oxidoreductase; 81.5 15 0.00052 32.7 11.6 56 62-120 164-219 (351)
70 1pqw_A Polyketide synthase; ro 81.2 14 0.00049 29.6 10.4 53 63-118 33-85 (198)
71 1jvb_A NAD(H)-dependent alcoho 81.1 11 0.00036 33.6 10.3 59 60-121 162-221 (347)
72 3goh_A Alcohol dehydrogenase, 81.1 3 0.0001 36.7 6.5 58 59-121 133-190 (315)
73 1t57_A Conserved protein MTH16 81.0 7.5 0.00026 31.9 8.2 75 43-124 30-113 (206)
74 3pi7_A NADH oxidoreductase; gr 80.9 6.2 0.00021 35.2 8.7 50 71-123 167-216 (349)
75 3krt_A Crotonyl COA reductase; 80.8 3.4 0.00011 38.6 7.1 57 64-123 224-280 (456)
76 1wly_A CAAR, 2-haloacrylate re 80.4 12 0.00041 33.0 10.4 55 63-120 140-194 (333)
77 1qor_A Quinone oxidoreductase; 80.2 14 0.00047 32.5 10.7 58 60-120 131-189 (327)
78 4a0s_A Octenoyl-COA reductase/ 80.1 3.5 0.00012 38.3 7.0 55 64-121 216-270 (447)
79 3ip1_A Alcohol dehydrogenase, 79.7 8.1 0.00028 35.3 9.2 55 65-122 210-264 (404)
80 3zu3_A Putative reductase YPO4 79.4 20 0.00067 33.0 11.5 100 41-142 20-135 (405)
81 2q2v_A Beta-D-hydroxybutyrate 79.4 13 0.00044 31.3 9.9 70 70-140 5-75 (255)
82 4gkb_A 3-oxoacyl-[acyl-carrier 79.4 9.7 0.00033 32.6 9.1 74 69-142 7-81 (258)
83 1h2b_A Alcohol dehydrogenase; 79.2 17 0.00058 32.4 11.1 59 59-121 175-236 (359)
84 3fbg_A Putative arginate lyase 79.1 9.8 0.00033 33.8 9.4 51 68-121 150-200 (346)
85 2zb4_A Prostaglandin reductase 78.8 19 0.00064 32.1 11.2 55 62-119 152-210 (357)
86 3two_A Mannitol dehydrogenase; 78.4 7 0.00024 34.8 8.2 58 60-121 168-225 (348)
87 1xa0_A Putative NADPH dependen 78.4 3.9 0.00013 36.1 6.5 57 62-121 142-199 (328)
88 3uf0_A Short-chain dehydrogena 78.3 11 0.00036 32.4 9.1 56 70-125 32-87 (273)
89 1f8f_A Benzyl alcohol dehydrog 78.2 15 0.00051 33.0 10.4 58 62-122 184-241 (371)
90 2hcy_A Alcohol dehydrogenase 1 78.2 21 0.00073 31.5 11.4 59 59-120 160-218 (347)
91 1c1d_A L-phenylalanine dehydro 78.1 14 0.00049 33.3 10.1 65 51-119 155-221 (355)
92 4ekn_B Aspartate carbamoyltran 77.8 12 0.0004 33.1 9.2 61 62-124 145-211 (306)
93 1ml4_A Aspartate transcarbamoy 77.3 10 0.00035 33.5 8.7 61 62-124 149-214 (308)
94 2d8a_A PH0655, probable L-thre 77.3 16 0.00055 32.4 10.3 57 59-120 159-216 (348)
95 2dph_A Formaldehyde dismutase; 77.2 17 0.0006 32.9 10.7 56 60-119 177-233 (398)
96 1e3j_A NADP(H)-dependent ketos 77.2 16 0.00055 32.4 10.3 58 60-121 160-217 (352)
97 1tt7_A YHFP; alcohol dehydroge 76.8 4.2 0.00014 35.9 6.2 57 62-121 143-200 (330)
98 4eez_A Alcohol dehydrogenase 1 76.7 14 0.00047 32.7 9.6 61 60-124 155-216 (348)
99 3tpf_A Otcase, ornithine carba 76.4 14 0.00048 32.7 9.3 63 62-124 139-207 (307)
100 1vj0_A Alcohol dehydrogenase, 76.1 11 0.00039 34.0 9.0 59 59-121 185-245 (380)
101 3h7a_A Short chain dehydrogena 75.8 21 0.00073 29.9 10.2 72 70-141 8-81 (252)
102 1rjw_A ADH-HT, alcohol dehydro 75.8 19 0.00066 31.8 10.3 52 65-120 161-212 (339)
103 1vlv_A Otcase, ornithine carba 75.3 20 0.00068 31.9 10.0 60 62-123 161-228 (325)
104 2vn8_A Reticulon-4-interacting 75.2 14 0.00048 33.2 9.4 54 66-123 181-234 (375)
105 2j3h_A NADP-dependent oxidored 75.1 12 0.00042 33.0 8.9 55 62-119 149-204 (345)
106 3uko_A Alcohol dehydrogenase c 75.0 13 0.00044 33.5 9.1 107 62-209 187-295 (378)
107 3l4b_C TRKA K+ channel protien 74.8 33 0.0011 27.9 11.7 49 73-124 3-52 (218)
108 3s8m_A Enoyl-ACP reductase; ro 74.8 19 0.00065 33.3 10.1 100 41-142 34-149 (422)
109 2i6u_A Otcase, ornithine carba 74.8 20 0.00069 31.6 9.9 60 62-123 142-209 (307)
110 2cdc_A Glucose dehydrogenase g 74.7 12 0.00041 33.5 8.8 51 69-120 181-231 (366)
111 3llv_A Exopolyphosphatase-rela 74.6 10 0.00034 28.6 7.1 49 72-123 8-56 (141)
112 4fs3_A Enoyl-[acyl-carrier-pro 74.4 12 0.00041 31.7 8.3 73 70-142 7-84 (256)
113 3l6u_A ABC-type sugar transpor 74.4 38 0.0013 28.5 14.5 41 166-209 187-228 (293)
114 3nx4_A Putative oxidoreductase 74.4 6.9 0.00024 34.4 6.9 56 63-121 140-196 (324)
115 1iz0_A Quinone oxidoreductase; 74.2 8.2 0.00028 33.5 7.3 55 62-120 120-174 (302)
116 3csu_A Protein (aspartate carb 74.0 16 0.00053 32.4 8.9 60 62-123 148-213 (310)
117 1pl8_A Human sorbitol dehydrog 73.0 13 0.00043 33.3 8.4 57 60-120 163-220 (356)
118 3e03_A Short chain dehydrogena 72.9 31 0.0011 29.2 10.7 72 70-141 7-87 (274)
119 2b5w_A Glucose dehydrogenase; 72.1 13 0.00044 33.2 8.2 50 70-120 174-226 (357)
120 1piw_A Hypothetical zinc-type 71.9 11 0.00038 33.7 7.8 58 60-121 171-228 (360)
121 1duv_G Octase-1, ornithine tra 71.2 16 0.00054 32.7 8.4 54 71-124 156-217 (333)
122 3jv7_A ADH-A; dehydrogenase, n 71.0 22 0.00074 31.4 9.5 54 65-122 168-222 (345)
123 3kvo_A Hydroxysteroid dehydrog 71.0 32 0.0011 30.6 10.6 72 70-141 46-126 (346)
124 1p0f_A NADP-dependent alcohol 70.4 14 0.00047 33.2 8.1 56 62-120 185-240 (373)
125 2w37_A Ornithine carbamoyltran 70.2 28 0.00096 31.4 9.8 60 62-123 170-237 (359)
126 1cdo_A Alcohol dehydrogenase; 70.2 17 0.00058 32.6 8.7 55 62-120 186-241 (374)
127 2jhf_A Alcohol dehydrogenase E 70.0 16 0.00055 32.8 8.4 56 62-120 185-240 (374)
128 1e3i_A Alcohol dehydrogenase, 69.8 16 0.00055 32.8 8.4 55 62-120 189-244 (376)
129 1wwk_A Phosphoglycerate dehydr 69.7 42 0.0014 29.3 10.9 105 71-199 143-249 (307)
130 3egc_A Putative ribose operon 69.3 50 0.0017 27.7 14.5 34 174-209 185-222 (291)
131 2ew8_A (S)-1-phenylethanol deh 69.1 30 0.001 28.8 9.6 70 70-140 8-78 (249)
132 4fn4_A Short chain dehydrogena 69.0 19 0.00065 30.7 8.2 73 70-142 8-82 (254)
133 3afn_B Carbonyl reductase; alp 68.7 34 0.0011 28.3 9.8 55 71-125 9-65 (258)
134 3nrc_A Enoyl-[acyl-carrier-pro 68.6 23 0.0008 30.1 8.9 71 71-142 28-101 (280)
135 1sny_A Sniffer CG10964-PA; alp 68.6 17 0.00057 30.6 7.9 69 71-139 23-95 (267)
136 3gg9_A D-3-phosphoglycerate de 68.6 29 0.00098 31.2 9.7 106 71-199 161-268 (352)
137 1sby_A Alcohol dehydrogenase; 68.4 36 0.0012 28.3 10.0 71 70-141 6-81 (254)
138 1pvv_A Otcase, ornithine carba 68.2 48 0.0017 29.2 10.9 60 62-123 149-215 (315)
139 3r1i_A Short-chain type dehydr 68.2 24 0.00083 30.1 8.9 72 70-141 33-106 (276)
140 3o74_A Fructose transport syst 68.0 50 0.0017 27.3 17.0 44 165-210 170-216 (272)
141 4ep1_A Otcase, ornithine carba 67.9 31 0.0011 30.9 9.6 61 62-124 173-240 (340)
142 3h75_A Periplasmic sugar-bindi 67.9 61 0.0021 28.2 16.1 146 55-210 51-242 (350)
143 4eue_A Putative reductase CA_C 67.4 77 0.0026 29.1 12.9 100 41-142 34-149 (418)
144 3ezl_A Acetoacetyl-COA reducta 67.4 26 0.00089 29.2 8.8 73 70-142 14-89 (256)
145 3ek2_A Enoyl-(acyl-carrier-pro 67.2 18 0.0006 30.5 7.7 74 69-142 14-90 (271)
146 2ekl_A D-3-phosphoglycerate de 67.1 57 0.002 28.5 11.2 104 71-198 143-248 (313)
147 4imr_A 3-oxoacyl-(acyl-carrier 67.1 31 0.0011 29.4 9.4 70 71-140 35-106 (275)
148 2ae2_A Protein (tropinone redu 66.9 28 0.00095 29.2 8.9 72 70-141 10-83 (260)
149 3k4h_A Putative transcriptiona 66.8 56 0.0019 27.3 16.2 34 174-209 191-228 (292)
150 1dxh_A Ornithine carbamoyltran 66.7 20 0.00067 32.1 8.0 54 71-124 156-217 (335)
151 1id1_A Putative potassium chan 66.6 40 0.0014 25.6 10.7 96 73-209 6-105 (153)
152 3qiv_A Short-chain dehydrogena 66.6 29 0.00099 28.8 8.9 72 70-141 10-83 (253)
153 3gem_A Short chain dehydrogena 66.4 37 0.0013 28.6 9.6 69 71-142 29-97 (260)
154 1g0o_A Trihydroxynaphthalene r 66.3 23 0.00078 30.2 8.4 70 71-140 31-103 (283)
155 3ijr_A Oxidoreductase, short c 66.0 25 0.00084 30.3 8.5 71 71-141 49-122 (291)
156 2hq1_A Glucose/ribitol dehydro 66.0 45 0.0015 27.4 10.0 56 70-125 6-63 (247)
157 1uuf_A YAHK, zinc-type alcohol 65.8 20 0.00067 32.2 8.1 58 60-121 186-243 (369)
158 3rkr_A Short chain oxidoreduct 65.6 27 0.00093 29.3 8.6 71 71-141 31-103 (262)
159 3edm_A Short chain dehydrogena 65.6 27 0.00093 29.4 8.6 73 70-142 9-84 (259)
160 2fzw_A Alcohol dehydrogenase c 65.6 18 0.0006 32.4 7.8 55 62-120 184-239 (373)
161 4ggo_A Trans-2-enoyl-COA reduc 65.6 18 0.00061 33.2 7.6 73 70-142 51-138 (401)
162 3a28_C L-2.3-butanediol dehydr 65.5 22 0.00075 29.8 8.0 70 71-140 4-77 (258)
163 2jah_A Clavulanic acid dehydro 65.3 26 0.00089 29.2 8.4 71 70-140 8-80 (247)
164 3awd_A GOX2181, putative polyo 65.3 24 0.00083 29.3 8.2 56 70-125 14-70 (260)
165 3huu_A Transcription regulator 65.2 63 0.0022 27.4 15.0 155 48-209 41-238 (305)
166 4g81_D Putative hexonate dehyd 65.1 18 0.00062 30.9 7.3 74 69-142 9-84 (255)
167 4g2n_A D-isomer specific 2-hyd 65.1 38 0.0013 30.3 9.7 113 71-209 174-288 (345)
168 3u5t_A 3-oxoacyl-[acyl-carrier 65.0 37 0.0013 28.8 9.4 71 71-141 29-102 (267)
169 3is3_A 17BETA-hydroxysteroid d 64.9 29 0.00099 29.4 8.7 72 70-141 19-93 (270)
170 3grk_A Enoyl-(acyl-carrier-pro 64.8 17 0.00059 31.4 7.3 72 71-142 33-107 (293)
171 3i1j_A Oxidoreductase, short c 64.6 58 0.002 26.7 10.8 32 70-101 15-46 (247)
172 3lyl_A 3-oxoacyl-(acyl-carrier 64.5 24 0.00083 29.2 8.0 73 70-142 6-80 (247)
173 3sc4_A Short chain dehydrogena 64.4 54 0.0018 27.9 10.4 72 70-141 10-90 (285)
174 3gxh_A Putative phosphatase (D 64.0 48 0.0016 25.6 9.7 81 102-185 26-107 (157)
175 3hut_A Putative branched-chain 63.9 54 0.0018 28.4 10.6 160 33-210 46-228 (358)
176 3tfo_A Putative 3-oxoacyl-(acy 63.5 30 0.001 29.4 8.5 72 70-141 5-78 (264)
177 3qlj_A Short chain dehydrogena 63.4 36 0.0012 29.7 9.2 71 71-141 29-111 (322)
178 1yb1_A 17-beta-hydroxysteroid 63.2 27 0.00094 29.5 8.2 72 70-141 32-105 (272)
179 4iin_A 3-ketoacyl-acyl carrier 62.9 30 0.001 29.2 8.4 71 71-141 31-104 (271)
180 3o26_A Salutaridine reductase; 62.8 70 0.0024 27.1 10.9 29 71-99 14-42 (311)
181 3s55_A Putative short-chain de 62.6 22 0.00074 30.3 7.5 72 70-141 11-96 (281)
182 2gk4_A Conserved hypothetical 62.6 10 0.00035 32.1 5.1 25 78-102 28-52 (232)
183 3tjr_A Short chain dehydrogena 62.6 29 0.00098 30.0 8.3 71 71-141 33-105 (301)
184 3jtm_A Formate dehydrogenase, 62.4 53 0.0018 29.4 10.2 115 71-209 165-281 (351)
185 3gaf_A 7-alpha-hydroxysteroid 62.3 24 0.00083 29.6 7.6 72 70-141 13-86 (256)
186 3kkj_A Amine oxidase, flavin-c 62.2 8.2 0.00028 31.5 4.5 28 73-100 5-32 (336)
187 4dvj_A Putative zinc-dependent 62.2 31 0.0011 30.7 8.7 51 68-121 171-222 (363)
188 4fcc_A Glutamate dehydrogenase 62.1 46 0.0016 31.0 9.8 51 50-100 215-265 (450)
189 3ksu_A 3-oxoacyl-acyl carrier 62.1 38 0.0013 28.5 8.9 73 70-142 12-89 (262)
190 2h6e_A ADH-4, D-arabinose 1-de 62.1 25 0.00087 31.0 8.0 51 65-120 168-220 (344)
191 2rhc_B Actinorhodin polyketide 62.1 29 0.001 29.5 8.2 72 71-142 24-97 (277)
192 3ucx_A Short chain dehydrogena 62.0 32 0.0011 28.9 8.4 73 70-142 12-86 (264)
193 3v2g_A 3-oxoacyl-[acyl-carrier 61.8 38 0.0013 28.7 8.9 72 70-141 32-106 (271)
194 2pi1_A D-lactate dehydrogenase 61.7 42 0.0014 29.8 9.3 103 71-198 142-246 (334)
195 2g76_A 3-PGDH, D-3-phosphoglyc 61.4 59 0.002 28.8 10.3 104 71-198 166-271 (335)
196 3icc_A Putative 3-oxoacyl-(acy 61.0 57 0.002 26.9 9.8 56 70-125 8-65 (255)
197 4da9_A Short-chain dehydrogena 60.8 22 0.00074 30.5 7.1 71 71-141 31-104 (280)
198 4dmm_A 3-oxoacyl-[acyl-carrier 60.8 35 0.0012 28.9 8.4 71 71-141 30-103 (269)
199 3qp9_A Type I polyketide synth 60.7 39 0.0013 32.1 9.4 60 66-125 248-323 (525)
200 1fmc_A 7 alpha-hydroxysteroid 60.5 26 0.00089 29.0 7.5 56 70-125 12-68 (255)
201 1ae1_A Tropinone reductase-I; 60.5 34 0.0012 28.9 8.4 72 70-141 22-95 (273)
202 3d4o_A Dipicolinate synthase s 60.2 53 0.0018 28.3 9.6 46 71-119 156-201 (293)
203 3oig_A Enoyl-[acyl-carrier-pro 59.9 70 0.0024 26.7 10.2 71 70-141 8-84 (266)
204 4iiu_A 3-oxoacyl-[acyl-carrier 59.7 37 0.0013 28.5 8.4 71 71-141 28-101 (267)
205 1gdh_A D-glycerate dehydrogena 59.7 64 0.0022 28.4 10.1 105 71-198 147-254 (320)
206 4e3z_A Putative oxidoreductase 59.7 47 0.0016 28.0 9.1 71 71-141 28-101 (272)
207 1zq6_A Otcase, ornithine carba 59.7 37 0.0013 30.6 8.5 45 80-124 207-258 (359)
208 3oid_A Enoyl-[acyl-carrier-pro 59.6 39 0.0013 28.4 8.5 72 70-141 5-79 (258)
209 3snr_A Extracellular ligand-bi 59.5 85 0.0029 27.0 12.2 145 54-210 58-224 (362)
210 3sju_A Keto reductase; short-c 59.5 31 0.0011 29.4 7.9 71 71-141 26-98 (279)
211 3hcw_A Maltose operon transcri 59.5 79 0.0027 26.6 16.8 43 165-209 180-228 (295)
212 2qq5_A DHRS1, dehydrogenase/re 59.2 35 0.0012 28.5 8.1 71 70-140 6-78 (260)
213 2fr1_A Erythromycin synthase, 59.2 44 0.0015 31.3 9.4 60 66-125 223-287 (486)
214 3imf_A Short chain dehydrogena 59.2 19 0.00065 30.3 6.4 72 70-141 7-80 (257)
215 1geg_A Acetoin reductase; SDR 59.2 37 0.0013 28.3 8.3 71 71-141 4-76 (256)
216 3r3s_A Oxidoreductase; structu 59.1 32 0.0011 29.6 7.9 71 71-141 51-125 (294)
217 3v2h_A D-beta-hydroxybutyrate 59.1 83 0.0028 26.7 11.2 71 71-141 27-101 (281)
218 3osu_A 3-oxoacyl-[acyl-carrier 59.0 39 0.0013 28.0 8.3 71 71-141 6-79 (246)
219 2zat_A Dehydrogenase/reductase 58.8 34 0.0012 28.6 7.9 55 70-124 15-70 (260)
220 3e8x_A Putative NAD-dependent 58.8 25 0.00085 28.8 7.0 52 70-124 22-74 (236)
221 3ic5_A Putative saccharopine d 58.6 38 0.0013 23.9 7.3 49 71-123 7-56 (118)
222 1gee_A Glucose 1-dehydrogenase 58.5 41 0.0014 27.9 8.4 70 71-140 9-81 (261)
223 1ja9_A 4HNR, 1,3,6,8-tetrahydr 58.5 33 0.0011 28.7 7.8 55 71-125 23-79 (274)
224 2z5l_A Tylkr1, tylactone synth 58.4 45 0.0015 31.5 9.4 60 66-125 256-320 (511)
225 1zem_A Xylitol dehydrogenase; 58.3 35 0.0012 28.6 8.0 71 70-140 8-80 (262)
226 2r6j_A Eugenol synthase 1; phe 58.3 33 0.0011 29.6 8.0 54 71-124 13-67 (318)
227 2dbq_A Glyoxylate reductase; D 58.3 98 0.0033 27.3 11.7 104 71-198 151-256 (334)
228 1edo_A Beta-keto acyl carrier 58.2 47 0.0016 27.2 8.7 71 71-141 3-76 (244)
229 1leh_A Leucine dehydrogenase; 58.2 43 0.0015 30.2 8.8 66 51-119 152-220 (364)
230 3gvx_A Glycerate dehydrogenase 58.2 32 0.0011 30.0 7.7 102 71-199 123-226 (290)
231 2uvd_A 3-oxoacyl-(acyl-carrier 58.1 33 0.0011 28.4 7.7 71 70-140 5-78 (246)
232 3gd5_A Otcase, ornithine carba 58.1 61 0.0021 28.7 9.5 61 62-124 151-218 (323)
233 1mx3_A CTBP1, C-terminal bindi 57.7 47 0.0016 29.7 9.0 106 70-198 168-275 (347)
234 3cxt_A Dehydrogenase with diff 57.6 31 0.0011 29.7 7.6 73 70-142 35-109 (291)
235 2cf5_A Atccad5, CAD, cinnamyl 57.6 30 0.001 30.7 7.7 57 61-121 172-230 (357)
236 2gas_A Isoflavone reductase; N 57.5 20 0.0007 30.6 6.4 54 71-124 4-64 (307)
237 3v8b_A Putative dehydrogenase, 57.4 32 0.0011 29.4 7.6 71 71-141 30-102 (283)
238 2c07_A 3-oxoacyl-(acyl-carrier 57.0 21 0.00071 30.5 6.3 72 70-141 45-118 (285)
239 1x1t_A D(-)-3-hydroxybutyrate 56.8 46 0.0016 27.8 8.5 71 70-140 5-79 (260)
240 4e5n_A Thermostable phosphite 56.8 45 0.0015 29.6 8.6 105 71-198 146-252 (330)
241 3ctm_A Carbonyl reductase; alc 56.4 55 0.0019 27.5 9.0 55 71-125 36-91 (279)
242 2j6i_A Formate dehydrogenase; 56.2 82 0.0028 28.2 10.4 106 71-198 165-273 (364)
243 4ibo_A Gluconate dehydrogenase 56.1 30 0.001 29.4 7.2 73 70-142 27-101 (271)
244 3ged_A Short-chain dehydrogena 56.1 58 0.002 27.5 8.9 69 71-142 4-73 (247)
245 1vl8_A Gluconate 5-dehydrogena 56.0 41 0.0014 28.4 8.0 71 70-140 22-95 (267)
246 3t7c_A Carveol dehydrogenase; 55.9 34 0.0012 29.5 7.6 71 71-141 30-114 (299)
247 3svt_A Short-chain type dehydr 55.5 49 0.0017 28.0 8.5 72 70-141 12-88 (281)
248 2nac_A NAD-dependent formate d 55.2 69 0.0024 29.2 9.7 106 71-198 192-299 (393)
249 3sx2_A Putative 3-ketoacyl-(ac 55.1 33 0.0011 29.0 7.3 72 70-141 14-99 (278)
250 3rwb_A TPLDH, pyridoxal 4-dehy 54.6 65 0.0022 26.7 9.0 70 70-141 7-77 (247)
251 2o23_A HADH2 protein; HSD17B10 54.6 79 0.0027 26.1 9.6 69 70-140 13-82 (265)
252 3pgx_A Carveol dehydrogenase; 54.5 34 0.0012 29.1 7.3 72 70-141 16-102 (280)
253 3qk7_A Transcriptional regulat 54.4 97 0.0033 26.0 16.0 43 166-211 179-225 (294)
254 3grp_A 3-oxoacyl-(acyl carrier 54.3 47 0.0016 28.1 8.1 68 71-141 29-98 (266)
255 1yqd_A Sinapyl alcohol dehydro 54.2 43 0.0015 29.9 8.2 52 65-120 183-236 (366)
256 1xq1_A Putative tropinone redu 54.1 41 0.0014 28.1 7.7 55 70-124 15-70 (266)
257 3aoe_E Glutamate dehydrogenase 54.1 61 0.0021 29.9 9.1 52 51-103 199-251 (419)
258 3tzq_B Short-chain type dehydr 53.7 99 0.0034 25.9 10.6 70 70-141 12-82 (271)
259 2pd4_A Enoyl-[acyl-carrier-pro 53.7 55 0.0019 27.6 8.5 72 70-142 7-82 (275)
260 1x13_A NAD(P) transhydrogenase 53.5 22 0.00075 32.5 6.1 47 71-120 173-219 (401)
261 3ipc_A ABC transporter, substr 53.5 89 0.003 27.0 10.1 160 33-210 44-227 (356)
262 4hy3_A Phosphoglycerate oxidor 53.4 1.2E+02 0.0041 27.2 10.9 113 71-210 177-291 (365)
263 3ai3_A NADPH-sorbose reductase 53.3 52 0.0018 27.5 8.2 71 70-140 8-81 (263)
264 4dry_A 3-oxoacyl-[acyl-carrier 53.2 94 0.0032 26.3 10.0 31 71-101 35-65 (281)
265 1wma_A Carbonyl reductase [NAD 53.1 39 0.0013 28.1 7.4 54 70-123 5-60 (276)
266 3u0b_A Oxidoreductase, short c 53.1 60 0.0021 30.1 9.2 72 70-142 214-285 (454)
267 1xg5_A ARPG836; short chain de 53.1 64 0.0022 27.1 8.9 54 71-124 34-90 (279)
268 3i6i_A Putative leucoanthocyan 52.9 31 0.0011 30.2 7.0 54 71-124 12-69 (346)
269 1l7d_A Nicotinamide nucleotide 52.8 20 0.00067 32.6 5.7 47 71-120 173-219 (384)
270 3tox_A Short chain dehydrogena 52.4 30 0.001 29.6 6.6 72 70-141 9-82 (280)
271 1zmt_A Haloalcohol dehalogenas 52.4 19 0.00065 30.2 5.2 52 71-122 3-54 (254)
272 1xu9_A Corticosteroid 11-beta- 52.3 55 0.0019 27.7 8.3 54 71-124 30-85 (286)
273 3uve_A Carveol dehydrogenase ( 52.2 38 0.0013 28.8 7.3 72 70-141 12-101 (286)
274 3rih_A Short chain dehydrogena 52.1 48 0.0016 28.5 7.9 71 71-141 43-116 (293)
275 4a27_A Synaptic vesicle membra 52.0 45 0.0015 29.4 7.9 56 62-122 136-192 (349)
276 3kzv_A Uncharacterized oxidore 51.9 29 0.00099 29.0 6.3 70 71-141 4-75 (254)
277 2bma_A Glutamate dehydrogenase 51.8 53 0.0018 30.7 8.4 50 51-101 233-283 (470)
278 1v8b_A Adenosylhomocysteinase; 51.8 71 0.0024 30.0 9.4 91 71-188 258-348 (479)
279 1u7z_A Coenzyme A biosynthesis 51.7 21 0.00073 29.9 5.2 24 78-101 33-56 (226)
280 3d64_A Adenosylhomocysteinase; 51.3 60 0.002 30.6 8.8 91 71-188 278-368 (494)
281 4egf_A L-xylulose reductase; s 51.2 38 0.0013 28.6 7.0 71 71-141 22-95 (266)
282 2izz_A Pyrroline-5-carboxylate 51.2 1.2E+02 0.0042 26.3 12.6 118 73-212 25-146 (322)
283 2e7j_A SEP-tRNA:Cys-tRNA synth 51.1 54 0.0018 28.5 8.3 51 72-123 71-121 (371)
284 3pk0_A Short-chain dehydrogena 50.8 44 0.0015 28.1 7.3 72 70-141 11-85 (262)
285 1qsg_A Enoyl-[acyl-carrier-pro 50.8 70 0.0024 26.7 8.6 71 71-142 11-85 (265)
286 1iy8_A Levodione reductase; ox 50.8 54 0.0018 27.5 7.9 72 70-141 14-89 (267)
287 1h5q_A NADP-dependent mannitol 50.7 50 0.0017 27.4 7.7 72 71-142 16-90 (265)
288 4dgs_A Dehydrogenase; structur 50.7 70 0.0024 28.5 8.9 92 71-189 172-263 (340)
289 3k31_A Enoyl-(acyl-carrier-pro 50.6 50 0.0017 28.4 7.8 70 71-141 32-105 (296)
290 3pxx_A Carveol dehydrogenase; 50.4 45 0.0015 28.2 7.4 72 70-141 11-96 (287)
291 3f1l_A Uncharacterized oxidore 50.4 1.1E+02 0.0036 25.3 10.4 32 70-101 13-44 (252)
292 4hp8_A 2-deoxy-D-gluconate 3-d 50.3 49 0.0017 28.0 7.4 55 69-124 9-63 (247)
293 4a8t_A Putrescine carbamoyltra 50.1 63 0.0022 28.8 8.3 46 79-124 185-236 (339)
294 3o38_A Short chain dehydrogena 49.8 1.1E+02 0.0038 25.4 10.4 31 71-101 24-55 (266)
295 3ce6_A Adenosylhomocysteinase; 49.8 58 0.002 30.7 8.5 95 66-188 271-365 (494)
296 3l49_A ABC sugar (ribose) tran 49.8 1.1E+02 0.0038 25.4 19.8 147 54-209 51-224 (291)
297 2gcg_A Glyoxylate reductase/hy 49.6 1.3E+02 0.0046 26.3 12.0 105 71-198 156-262 (330)
298 2b4q_A Rhamnolipids biosynthes 49.5 46 0.0016 28.3 7.3 70 71-141 31-102 (276)
299 1w6u_A 2,4-dienoyl-COA reducta 49.4 54 0.0018 27.9 7.8 71 71-141 28-101 (302)
300 3ftp_A 3-oxoacyl-[acyl-carrier 49.4 38 0.0013 28.7 6.7 71 71-141 30-102 (270)
301 3grf_A Ornithine carbamoyltran 49.3 56 0.0019 29.0 7.9 45 79-123 172-226 (328)
302 2wyu_A Enoyl-[acyl carrier pro 49.3 63 0.0022 26.9 8.1 70 71-141 10-83 (261)
303 3gv0_A Transcriptional regulat 49.2 1.2E+02 0.0039 25.4 20.0 36 174-211 187-226 (288)
304 4g81_D Putative hexonate dehyd 49.2 1.2E+02 0.0041 25.6 9.9 74 107-186 24-97 (255)
305 1hxh_A 3BETA/17BETA-hydroxyste 49.2 77 0.0026 26.2 8.6 68 70-140 7-76 (253)
306 1vlj_A NADH-dependent butanol 49.1 1.2E+02 0.004 27.6 10.4 112 94-212 20-153 (407)
307 3oec_A Carveol dehydrogenase ( 48.9 44 0.0015 29.1 7.2 71 71-141 48-132 (317)
308 3ioy_A Short-chain dehydrogena 48.8 49 0.0017 28.8 7.5 73 70-142 9-85 (319)
309 3n74_A 3-ketoacyl-(acyl-carrie 48.5 67 0.0023 26.6 8.1 68 71-141 11-80 (261)
310 2dq4_A L-threonine 3-dehydroge 48.5 56 0.0019 28.7 7.9 51 60-115 156-208 (343)
311 3slk_A Polyketide synthase ext 48.5 71 0.0024 32.0 9.4 59 67-125 528-592 (795)
312 3gdg_A Probable NADP-dependent 48.3 50 0.0017 27.6 7.3 72 71-142 22-99 (267)
313 3aog_A Glutamate dehydrogenase 48.2 83 0.0028 29.2 9.1 52 51-103 216-268 (440)
314 3l6e_A Oxidoreductase, short-c 48.2 70 0.0024 26.2 8.1 32 71-102 5-36 (235)
315 3u9l_A 3-oxoacyl-[acyl-carrier 48.1 1.1E+02 0.0038 26.6 9.8 71 71-141 7-84 (324)
316 3tsc_A Putative oxidoreductase 48.1 55 0.0019 27.6 7.6 72 70-141 12-98 (277)
317 3tpc_A Short chain alcohol deh 48.0 1.1E+02 0.0037 25.3 9.4 70 70-141 8-78 (257)
318 4a8p_A Putrescine carbamoyltra 48.0 68 0.0023 28.8 8.3 46 79-124 163-214 (355)
319 2pnf_A 3-oxoacyl-[acyl-carrier 47.9 1E+02 0.0036 25.0 9.2 72 70-141 8-82 (248)
320 3p2y_A Alanine dehydrogenase/p 47.9 28 0.00095 31.7 5.7 49 71-122 185-233 (381)
321 2g1u_A Hypothetical protein TM 47.6 14 0.00049 28.4 3.4 97 71-209 20-118 (155)
322 2tmg_A Protein (glutamate dehy 47.6 1.1E+02 0.0038 28.0 9.8 51 51-102 190-242 (415)
323 3q98_A Transcarbamylase; rossm 47.5 39 0.0013 30.9 6.7 45 80-124 209-259 (399)
324 4e6p_A Probable sorbitol dehyd 47.4 71 0.0024 26.6 8.1 71 70-142 9-80 (259)
325 1uls_A Putative 3-oxoacyl-acyl 47.3 1.2E+02 0.004 24.9 10.0 67 70-140 6-73 (245)
326 2yq5_A D-isomer specific 2-hyd 47.3 1.1E+02 0.0037 27.2 9.6 103 71-199 149-253 (343)
327 1hdc_A 3-alpha, 20 beta-hydrox 47.3 71 0.0024 26.5 8.1 69 70-141 6-76 (254)
328 4eso_A Putative oxidoreductase 47.3 74 0.0025 26.5 8.2 69 70-141 9-79 (255)
329 2yfk_A Aspartate/ornithine car 47.2 38 0.0013 31.2 6.6 44 80-123 206-255 (418)
330 3h2s_A Putative NADH-flavin re 47.0 53 0.0018 26.4 7.0 50 71-123 2-51 (224)
331 1a3w_A Pyruvate kinase; allost 46.9 1.2E+02 0.004 28.7 10.0 123 85-213 283-428 (500)
332 4fgs_A Probable dehydrogenase 46.8 63 0.0021 27.7 7.7 70 70-142 30-101 (273)
333 1pg5_A Aspartate carbamoyltran 46.6 24 0.0008 31.0 4.9 59 62-124 143-206 (299)
334 3jy6_A Transcriptional regulat 46.5 1.2E+02 0.0042 25.0 14.2 35 174-210 180-218 (276)
335 4amu_A Ornithine carbamoyltran 46.5 74 0.0025 28.7 8.3 61 62-124 174-244 (365)
336 3mje_A AMPHB; rossmann fold, o 46.4 1.1E+02 0.0038 28.7 9.9 56 70-125 240-300 (496)
337 2rir_A Dipicolinate synthase, 46.4 55 0.0019 28.3 7.4 46 71-119 158-203 (300)
338 4dio_A NAD(P) transhydrogenase 46.4 36 0.0012 31.2 6.3 49 71-122 191-239 (405)
339 3d3j_A Enhancer of mRNA-decapp 46.4 77 0.0026 27.8 8.3 32 71-102 134-168 (306)
340 3c1o_A Eugenol synthase; pheny 46.3 41 0.0014 28.9 6.6 54 71-124 6-65 (321)
341 2p91_A Enoyl-[acyl-carrier-pro 46.3 61 0.0021 27.4 7.6 70 71-141 23-96 (285)
342 3ba1_A HPPR, hydroxyphenylpyru 46.2 98 0.0033 27.4 9.1 110 71-209 165-276 (333)
343 1yxm_A Pecra, peroxisomal tran 46.2 78 0.0027 26.9 8.4 71 70-140 19-96 (303)
344 3zv4_A CIS-2,3-dihydrobiphenyl 46.1 76 0.0026 26.9 8.2 69 70-141 6-76 (281)
345 4fc7_A Peroxisomal 2,4-dienoyl 46.1 59 0.002 27.5 7.5 71 71-141 29-102 (277)
346 2bd0_A Sepiapterin reductase; 45.9 70 0.0024 26.1 7.8 71 71-141 4-83 (244)
347 3d3k_A Enhancer of mRNA-decapp 45.9 63 0.0022 27.5 7.5 32 71-102 87-121 (259)
348 2w2k_A D-mandelate dehydrogena 45.9 1.6E+02 0.0054 26.1 12.2 106 71-198 164-272 (348)
349 2ph3_A 3-oxoacyl-[acyl carrier 45.7 59 0.002 26.5 7.3 51 71-121 3-55 (245)
350 1xkq_A Short-chain reductase f 45.7 55 0.0019 27.7 7.2 33 70-102 7-39 (280)
351 3k92_A NAD-GDH, NAD-specific g 45.3 48 0.0016 30.6 6.9 51 51-102 202-253 (424)
352 1jx6_A LUXP protein; protein-l 45.3 1.5E+02 0.005 25.4 14.8 41 166-209 226-267 (342)
353 3l77_A Short-chain alcohol deh 45.2 47 0.0016 27.1 6.5 70 71-140 4-76 (235)
354 1oth_A Protein (ornithine tran 45.2 69 0.0023 28.3 7.8 60 62-123 149-215 (321)
355 1qyd_A Pinoresinol-lariciresin 45.1 63 0.0021 27.5 7.6 53 71-123 6-63 (313)
356 3lop_A Substrate binding perip 45.1 1.5E+02 0.005 25.7 10.2 156 33-209 47-229 (364)
357 3op4_A 3-oxoacyl-[acyl-carrier 45.0 71 0.0024 26.4 7.7 69 70-141 10-80 (248)
358 4dqx_A Probable oxidoreductase 44.9 94 0.0032 26.3 8.6 69 71-141 29-98 (277)
359 3tl3_A Short-chain type dehydr 44.5 62 0.0021 26.9 7.3 50 71-125 11-60 (257)
360 3evt_A Phosphoglycerate dehydr 44.4 95 0.0033 27.3 8.7 105 70-198 137-243 (324)
361 2x9g_A PTR1, pteridine reducta 44.4 60 0.0021 27.6 7.3 55 71-125 25-82 (288)
362 2cfc_A 2-(R)-hydroxypropyl-COM 44.4 46 0.0016 27.3 6.4 32 71-102 4-35 (250)
363 3cs3_A Sugar-binding transcrip 44.3 1.3E+02 0.0046 24.7 12.1 25 174-200 176-200 (277)
364 3gk3_A Acetoacetyl-COA reducta 44.1 63 0.0022 27.1 7.3 71 71-141 27-100 (269)
365 3f9t_A TDC, L-tyrosine decarbo 44.1 57 0.0019 28.5 7.3 55 71-125 87-153 (397)
366 1bgv_A Glutamate dehydrogenase 44.1 60 0.0021 30.2 7.5 51 51-102 211-262 (449)
367 1xhl_A Short-chain dehydrogena 44.1 63 0.0021 27.7 7.4 71 71-141 28-103 (297)
368 3m6i_A L-arabinitol 4-dehydrog 43.8 45 0.0015 29.6 6.5 53 60-115 171-223 (363)
369 3rss_A Putative uncharacterize 43.8 70 0.0024 30.2 8.1 50 71-120 54-110 (502)
370 1gtm_A Glutamate dehydrogenase 43.6 75 0.0026 29.2 8.1 52 51-102 192-245 (419)
371 2wm3_A NMRA-like family domain 43.4 83 0.0028 26.6 8.1 53 71-124 7-60 (299)
372 3ly1_A Putative histidinol-pho 43.3 62 0.0021 28.0 7.3 53 72-125 70-122 (354)
373 4fn4_A Short chain dehydrogena 43.2 1.3E+02 0.0043 25.4 9.0 85 95-185 8-94 (254)
374 2wsb_A Galactitol dehydrogenas 43.2 89 0.003 25.6 8.0 33 70-102 12-44 (254)
375 2z1n_A Dehydrogenase; reductas 43.0 88 0.003 26.0 8.0 32 70-101 8-39 (260)
376 1mxh_A Pteridine reductase 2; 42.9 64 0.0022 27.1 7.2 31 71-101 13-43 (276)
377 3pp8_A Glyoxylate/hydroxypyruv 42.8 87 0.003 27.5 8.1 113 71-209 140-254 (315)
378 1qyc_A Phenylcoumaran benzylic 42.7 91 0.0031 26.4 8.2 53 71-123 6-64 (308)
379 4hb9_A Similarities with proba 42.6 26 0.0009 31.1 4.8 28 72-99 3-30 (412)
380 3cq5_A Histidinol-phosphate am 42.6 56 0.0019 28.6 7.0 52 72-125 94-146 (369)
381 3ppi_A 3-hydroxyacyl-COA dehyd 42.2 89 0.003 26.3 8.0 65 71-138 32-98 (281)
382 3ew7_A LMO0794 protein; Q8Y8U8 42.1 1.3E+02 0.0043 23.8 10.8 50 71-124 2-51 (221)
383 3r3j_A Glutamate dehydrogenase 42.0 77 0.0026 29.5 7.8 52 50-101 219-270 (456)
384 3rd5_A Mypaa.01249.C; ssgcid, 41.8 1.2E+02 0.004 25.7 8.8 54 70-125 17-70 (291)
385 3i4f_A 3-oxoacyl-[acyl-carrier 41.6 54 0.0019 27.3 6.5 71 71-141 9-82 (264)
386 3oz2_A Digeranylgeranylglycero 41.2 26 0.00089 30.9 4.5 28 73-100 7-34 (397)
387 2a4k_A 3-oxoacyl-[acyl carrier 41.1 1.3E+02 0.0046 25.0 9.0 69 70-141 7-77 (263)
388 2aef_A Calcium-gated potassium 41.1 1.4E+02 0.0049 24.2 10.0 48 71-123 10-57 (234)
389 3get_A Histidinol-phosphate am 40.8 83 0.0028 27.3 7.8 52 72-124 84-135 (365)
390 1yo6_A Putative carbonyl reduc 40.7 53 0.0018 26.8 6.2 32 71-102 5-38 (250)
391 3gbc_A Pyrazinamidase/nicotina 40.7 1E+02 0.0035 24.5 7.7 58 59-120 119-183 (186)
392 3rot_A ABC sugar transporter, 40.7 1.6E+02 0.0055 24.6 16.5 43 164-209 178-225 (297)
393 2ekp_A 2-deoxy-D-gluconate 3-d 40.3 95 0.0032 25.4 7.7 49 71-124 4-52 (239)
394 1y81_A Conserved hypothetical 40.2 89 0.0031 23.6 6.9 49 71-119 71-119 (138)
395 2hmt_A YUAA protein; RCK, KTN, 40.1 37 0.0013 25.0 4.6 44 73-119 9-52 (144)
396 3dii_A Short-chain dehydrogena 40.0 1.4E+02 0.0049 24.4 8.9 68 71-141 4-72 (247)
397 2o8n_A APOA-I binding protein; 39.8 38 0.0013 29.2 5.1 33 71-103 81-116 (265)
398 1p9o_A Phosphopantothenoylcyst 39.8 27 0.00091 30.9 4.2 26 77-102 63-88 (313)
399 1lnq_A MTHK channels, potassiu 39.6 1.3E+02 0.0045 26.1 8.9 47 72-123 117-163 (336)
400 1ek6_A UDP-galactose 4-epimera 39.5 91 0.0031 26.9 7.8 33 70-102 3-35 (348)
401 3k9c_A Transcriptional regulat 39.4 1.7E+02 0.0057 24.4 16.8 36 174-211 184-223 (289)
402 2bkw_A Alanine-glyoxylate amin 39.1 78 0.0027 27.6 7.4 52 71-124 60-117 (385)
403 3m9w_A D-xylose-binding peripl 39.0 1.7E+02 0.006 24.5 17.5 43 165-209 178-222 (313)
404 3oj0_A Glutr, glutamyl-tRNA re 38.8 53 0.0018 24.6 5.4 25 71-95 22-46 (144)
405 2d59_A Hypothetical protein PH 38.6 92 0.0031 23.6 6.8 50 71-120 79-128 (144)
406 2pd6_A Estradiol 17-beta-dehyd 38.6 48 0.0017 27.5 5.6 33 70-102 8-40 (264)
407 3grk_A Enoyl-(acyl-carrier-pro 38.5 1.7E+02 0.0059 24.8 9.4 87 94-187 31-121 (293)
408 4ffl_A PYLC; amino acid, biosy 38.5 42 0.0014 29.7 5.4 32 71-102 2-33 (363)
409 4dyv_A Short-chain dehydrogena 38.3 90 0.0031 26.3 7.4 68 71-141 30-99 (272)
410 3gvc_A Oxidoreductase, probabl 38.3 1.1E+02 0.0037 25.9 7.9 69 71-141 31-100 (277)
411 2h78_A Hibadh, 3-hydroxyisobut 38.2 86 0.003 26.8 7.4 45 71-118 4-48 (302)
412 3ksm_A ABC-type sugar transpor 38.1 1.6E+02 0.0056 24.0 18.2 147 54-209 48-221 (276)
413 1lss_A TRK system potassium up 38.0 1.1E+02 0.0038 22.0 7.8 46 72-120 6-52 (140)
414 3m1a_A Putative dehydrogenase; 37.9 99 0.0034 25.9 7.6 69 71-141 7-76 (281)
415 1oaa_A Sepiapterin reductase; 37.8 97 0.0033 25.6 7.5 70 71-140 8-84 (259)
416 2dtx_A Glucose 1-dehydrogenase 37.8 1.1E+02 0.0037 25.6 7.8 33 71-103 10-42 (264)
417 4dll_A 2-hydroxy-3-oxopropiona 37.8 92 0.0031 27.1 7.5 46 71-119 32-77 (320)
418 2et6_A (3R)-hydroxyacyl-COA de 37.4 2.2E+02 0.0076 27.3 10.7 69 70-141 323-392 (604)
419 3lf2_A Short chain oxidoreduct 37.3 1.3E+02 0.0044 25.0 8.2 72 70-141 9-84 (265)
420 2h7i_A Enoyl-[acyl-carrier-pro 37.1 82 0.0028 26.4 6.9 70 71-141 9-81 (269)
421 4e4t_A Phosphoribosylaminoimid 36.7 62 0.0021 29.5 6.4 38 66-104 32-69 (419)
422 3r6d_A NAD-dependent epimerase 36.7 87 0.003 25.1 6.8 51 71-124 7-59 (221)
423 2fvy_A D-galactose-binding per 36.6 1.8E+02 0.0063 24.1 14.0 43 165-209 192-236 (309)
424 2ywl_A Thioredoxin reductase r 36.6 59 0.002 25.1 5.5 32 72-103 3-34 (180)
425 3h5o_A Transcriptional regulat 36.4 2E+02 0.0069 24.6 15.2 69 50-123 78-148 (339)
426 1ygy_A PGDH, D-3-phosphoglycer 36.4 2.7E+02 0.0093 26.2 11.0 104 71-198 143-248 (529)
427 1nff_A Putative oxidoreductase 36.1 1.5E+02 0.005 24.6 8.4 32 70-101 8-39 (260)
428 4hvk_A Probable cysteine desul 36.0 65 0.0022 27.9 6.3 55 71-125 61-121 (382)
429 1v9l_A Glutamate dehydrogenase 35.8 67 0.0023 29.6 6.4 51 51-102 191-242 (421)
430 3ffh_A Histidinol-phosphate am 35.7 49 0.0017 28.8 5.4 53 72-125 86-138 (363)
431 1sc6_A PGDH, D-3-phosphoglycer 35.7 2.5E+02 0.0086 25.4 10.5 101 71-198 146-249 (404)
432 2cul_A Glucose-inhibited divis 35.4 40 0.0014 27.7 4.5 30 73-102 6-35 (232)
433 4e12_A Diketoreductase; oxidor 35.3 84 0.0029 26.7 6.7 29 72-100 6-34 (283)
434 3gyb_A Transcriptional regulat 35.3 1.9E+02 0.0064 23.8 15.1 139 57-209 53-212 (280)
435 2fwm_X 2,3-dihydro-2,3-dihydro 35.3 1.8E+02 0.0063 23.7 9.2 65 70-142 8-72 (250)
436 3sds_A Ornithine carbamoyltran 35.2 1.3E+02 0.0045 26.9 8.0 53 71-123 189-250 (353)
437 3gdg_A Probable NADP-dependent 35.0 1.5E+02 0.0052 24.4 8.3 88 95-186 21-112 (267)
438 1zej_A HBD-9, 3-hydroxyacyl-CO 34.9 2.2E+02 0.0075 24.5 9.4 41 71-115 13-53 (293)
439 3bfj_A 1,3-propanediol oxidore 34.8 84 0.0029 28.3 6.9 113 94-212 10-144 (387)
440 2dwc_A PH0318, 433AA long hypo 34.7 2.2E+02 0.0074 25.7 9.8 31 72-102 21-51 (433)
441 3kke_A LACI family transcripti 34.5 2E+02 0.007 24.0 15.5 34 174-209 196-233 (303)
442 3enk_A UDP-glucose 4-epimerase 34.5 1.9E+02 0.0063 24.7 9.1 56 70-125 6-63 (341)
443 1zk4_A R-specific alcohol dehy 34.4 98 0.0033 25.3 6.9 33 70-102 7-39 (251)
444 4h31_A Otcase, ornithine carba 34.4 1.3E+02 0.0044 27.0 7.9 54 71-124 182-243 (358)
445 3n58_A Adenosylhomocysteinase; 34.3 1E+02 0.0036 28.7 7.3 91 71-188 248-338 (464)
446 3ak4_A NADH-dependent quinucli 34.0 1.2E+02 0.0041 25.1 7.4 32 70-101 13-44 (263)
447 2vdc_G Glutamate synthase [NAD 34.0 1.2E+02 0.0041 27.9 8.0 53 71-123 265-323 (456)
448 1jzt_A Hypothetical 27.5 kDa p 33.8 1.1E+02 0.0038 25.7 7.1 33 71-103 60-95 (246)
449 3nyw_A Putative oxidoreductase 33.8 1.1E+02 0.0037 25.3 7.1 33 70-102 8-40 (250)
450 3td9_A Branched chain amino ac 33.8 2.3E+02 0.0078 24.4 16.7 146 53-210 69-238 (366)
451 4fk1_A Putative thioredoxin re 33.7 42 0.0014 28.7 4.5 28 73-100 9-36 (304)
452 2gdz_A NAD+-dependent 15-hydro 33.6 1E+02 0.0035 25.6 6.9 33 70-102 8-40 (267)
453 3gvp_A Adenosylhomocysteinase 33.6 1.2E+02 0.0042 27.9 7.7 97 64-188 215-311 (435)
454 3t4x_A Oxidoreductase, short c 33.6 1.2E+02 0.0041 25.3 7.4 55 70-124 11-68 (267)
455 2d1y_A Hypothetical protein TT 33.5 2E+02 0.0068 23.6 9.5 33 70-102 7-39 (256)
456 2yfq_A Padgh, NAD-GDH, NAD-spe 33.4 70 0.0024 29.5 6.1 52 51-103 193-245 (421)
457 3qiv_A Short-chain dehydrogena 33.3 2E+02 0.0067 23.5 8.7 85 95-185 10-96 (253)
458 3doj_A AT3G25530, dehydrogenas 33.2 73 0.0025 27.6 6.0 46 71-119 22-67 (310)
459 2d0i_A Dehydrogenase; structur 33.1 2.5E+02 0.0085 24.6 10.8 113 71-210 147-261 (333)
460 3p19_A BFPVVD8, putative blue 33.1 1.5E+02 0.0052 24.7 8.0 67 71-141 18-84 (266)
461 2bgk_A Rhizome secoisolaricire 33.0 1.2E+02 0.0042 25.1 7.4 32 70-101 17-48 (278)
462 3h9u_A Adenosylhomocysteinase; 33.0 1.3E+02 0.0043 27.9 7.7 91 71-188 212-302 (436)
463 3v8e_A Nicotinamidase; hydrola 33.0 1.5E+02 0.0051 24.2 7.6 50 71-120 156-214 (216)
464 3sg0_A Extracellular ligand-bi 33.0 2.4E+02 0.0081 24.3 14.1 144 54-209 78-247 (386)
465 3g0o_A 3-hydroxyisobutyrate de 32.9 1.1E+02 0.0039 26.1 7.3 45 72-119 9-53 (303)
466 2vhw_A Alanine dehydrogenase; 32.9 89 0.0031 28.0 6.7 46 71-119 169-215 (377)
467 1e7w_A Pteridine reductase; di 32.9 1.1E+02 0.0036 26.1 7.0 53 71-123 11-66 (291)
468 2ew2_A 2-dehydropantoate 2-red 32.6 1.1E+02 0.0037 26.0 7.0 46 72-120 5-50 (316)
469 3gaf_A 7-alpha-hydroxysteroid 32.5 2.1E+02 0.0072 23.6 8.8 74 107-186 27-100 (256)
470 4egf_A L-xylulose reductase; s 32.5 1.6E+02 0.0053 24.6 7.9 87 95-186 21-109 (266)
471 3ff4_A Uncharacterized protein 32.5 91 0.0031 23.1 5.6 50 71-120 60-109 (122)
472 1yde_A Retinal dehydrogenase/r 32.4 2.2E+02 0.0074 23.7 8.9 32 70-101 10-41 (270)
473 3rp8_A Flavoprotein monooxygen 32.3 48 0.0016 29.7 4.8 33 71-103 24-56 (407)
474 2vz8_A Fatty acid synthase; tr 32.2 2.9E+02 0.0099 31.8 11.8 72 67-138 1882-1959(2512)
475 4evq_A Putative ABC transporte 32.1 2.1E+02 0.0073 24.6 9.1 133 71-209 84-239 (375)
476 3l6d_A Putative oxidoreductase 32.0 99 0.0034 26.6 6.7 45 72-119 11-55 (306)
477 3orq_A N5-carboxyaminoimidazol 32.0 61 0.0021 29.0 5.4 32 71-102 13-44 (377)
478 3oig_A Enoyl-[acyl-carrier-pro 32.0 1.9E+02 0.0064 23.9 8.3 87 95-187 8-99 (266)
479 2dgk_A GAD-beta, GADB, glutama 32.0 96 0.0033 28.2 6.9 52 73-125 106-169 (452)
480 2qhx_A Pteridine reductase 1; 31.9 1.1E+02 0.0037 26.7 7.0 53 71-123 48-103 (328)
481 4gcm_A TRXR, thioredoxin reduc 31.8 47 0.0016 28.4 4.5 27 73-99 9-35 (312)
482 4a5l_A Thioredoxin reductase; 31.6 39 0.0013 28.8 3.9 27 73-99 7-33 (314)
483 1eg5_A Aminotransferase; PLP-d 31.6 80 0.0028 27.4 6.2 54 72-125 63-122 (384)
484 2oln_A NIKD protein; flavoprot 31.3 46 0.0016 29.6 4.5 30 72-101 6-35 (397)
485 3fsl_A Aromatic-amino-acid ami 31.3 1.1E+02 0.0037 26.9 7.0 53 72-124 97-150 (397)
486 3q2o_A Phosphoribosylaminoimid 31.1 62 0.0021 29.0 5.4 34 68-102 13-46 (389)
487 3r3s_A Oxidoreductase; structu 31.1 2.4E+02 0.0082 23.8 9.8 88 95-186 50-139 (294)
488 3d6n_B Aspartate carbamoyltran 31.0 92 0.0032 27.1 6.1 41 62-104 140-183 (291)
489 1spx_A Short-chain reductase f 30.9 77 0.0026 26.6 5.7 32 71-102 8-39 (278)
490 1yvv_A Amine oxidase, flavin-c 30.9 49 0.0017 28.5 4.5 30 73-102 5-34 (336)
491 3slk_A Polyketide synthase ext 30.9 31 0.001 34.7 3.4 40 62-101 339-378 (795)
492 3lvm_A Cysteine desulfurase; s 30.8 1.1E+02 0.0038 27.1 7.1 54 72-125 87-146 (423)
493 3r2j_A Alpha/beta-hydrolase-li 30.7 2E+02 0.0067 23.7 8.1 53 71-123 159-218 (227)
494 3ado_A Lambda-crystallin; L-gu 30.3 56 0.0019 28.8 4.7 32 71-102 7-38 (319)
495 2duw_A Putative COA-binding pr 30.3 1.2E+02 0.0042 22.9 6.3 49 71-119 72-120 (145)
496 3alj_A 2-methyl-3-hydroxypyrid 30.3 55 0.0019 29.0 4.8 31 72-102 13-43 (379)
497 2eez_A Alanine dehydrogenase; 29.9 1.2E+02 0.0041 27.0 7.0 46 71-119 167-213 (369)
498 2rjo_A Twin-arginine transloca 29.8 2.6E+02 0.0088 23.7 15.5 43 165-209 187-231 (332)
499 3tha_A Tryptophan synthase alp 29.8 79 0.0027 26.9 5.4 73 72-148 90-170 (252)
500 4dgk_A Phytoene dehydrogenase; 29.8 39 0.0013 31.3 3.8 30 71-100 2-31 (501)
No 1
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=100.00 E-value=5e-69 Score=498.54 Aligned_cols=310 Identities=57% Similarity=0.977 Sum_probs=285.5
Q ss_pred cchhhhhhhhccCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHH
Q 020805 6 SNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGL 85 (321)
Q Consensus 6 ~~~~~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~Al 85 (321)
.+++++|.+.||+|||+++++|++.+|++||+|+|++|||||||||++.+++.+|.++|.+.+|.++||++|+||||+|+
T Consensus 23 ~~i~~~i~~lIG~TPLv~~~~Ls~~~G~~IylK~E~lnptGSfK~RgA~~~i~~a~~~g~l~~g~~~Vv~aSsGN~g~al 102 (344)
T 3vc3_A 23 TNIKKHVSQLIGRTPLVYLNKVTEGCGAYVAVKQEMMQPTASIADRPAYAMITDAEEKNLITPGKTTLIEPTSGNMGISM 102 (344)
T ss_dssp CSCBSSGGGGSCCCCEEECCSTTTTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCCCTTTCEEEEECSSHHHHHH
T ss_pred hhhhccHhhhcCCCceEECcccchhhCCEEEEEecCCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCEEEEeCCcHHHHHH
Confidence 46888999999999999999999999999999999999999999999999999999999999988899999999999999
Q ss_pred HHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhchH
Q 020805 86 AFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTG 165 (321)
Q Consensus 86 A~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 165 (321)
|++|+++|++|+||||+++++.|+++++.|||+|+.++...+..++...+.++..+.++.++++||+||.+++.||.|++
T Consensus 103 A~~aa~~G~~~~IvmP~~~~~~k~~~~~~~GA~Vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~~~~a~~~t~g 182 (344)
T 3vc3_A 103 AFMAAMKGYKMVLTMPSYTSLERRVTMRAFGAELILTDPAKGMGGTVKKAYELLENTPNAHMLQQFSNPANTQVHFETTG 182 (344)
T ss_dssp HHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTEECCCTTTCHHHHHHHHHTHH
T ss_pred HHHHHHcCCcEEEEECCCChHHHHHHHHHcCCEEEEECCCCcchHHHHHHHHHHhhccCceeccccccchhHHHHHHHHH
Confidence 99999999999999999999999999999999999998654455566666666667778999999999998889999999
Q ss_pred HHHHhhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEecCCCCccCCCCCCCcccccccCCCCcccccccccCE
Q 020805 166 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIIDE 245 (321)
Q Consensus 166 ~Ei~~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~~~~g~~~~~~~~gl~~~~~~~~~~~~~~d~ 245 (321)
.||++|+++.+|+||+|+|+||+++|++.++|+.+|+++||+|||.+++.+.++++.++.+.|++....+...+.+.+|+
T Consensus 183 ~EI~eq~~~~~d~vv~~vGgGG~~~Gi~~~~k~~~p~v~vigVep~~s~~l~~~~~~~~~i~g~g~~~~~~~~~~~~~d~ 262 (344)
T 3vc3_A 183 PEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGVEPSESNVLNGGKPGPHHITGNGVGFKPDILDLDVMEK 262 (344)
T ss_dssp HHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCGGGTCCCCCCSCTTSCCSSCCTTCCGGGCSE
T ss_pred HHHHHHhCCCceEEEEecCCccchHHHhhhhHhhCCCceEEEEcCCCChhhcCCCCCCeeEecccccccCcccchhhceE
Confidence 99999998899999999999999999999999999999999999999999988888888888888887777888899999
Q ss_pred EEEeCHHHHHHHHHHHHHhcCCeEecchHHHHHHHHHHHhcCCCCCCEEEEEecCC------CCCCHHHHHhhcCC
Q 020805 246 VVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVVCSQFA------CITSDSWLIAITCM 315 (321)
Q Consensus 246 ~~~V~d~e~~~a~~~l~~~~Gi~~~pss~~a~aa~~~~~~~~~~~~~~vv~i~tgg------~~~~~~~~~~~~~~ 315 (321)
++.|+|+|+++++++|+++||++++|+||+++++++++++....++++||+|+||+ ++.+++|+++....
T Consensus 263 ~v~v~d~eai~a~~~L~~~eGi~v~~ssga~~~aAl~~a~~~~~~g~~VV~il~d~G~rYlst~~~~~~~~e~~~~ 338 (344)
T 3vc3_A 263 VLEVSSEDAVNMARVLALKEGLMVGISSGANTVAALRLAQLPENKGKLIVTVHPSFGERYLSSVLFQELRQEAENM 338 (344)
T ss_dssp EEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHTSGGGTTCEEEEEECBBGGGGTTSTTTHHHHHHHHTC
T ss_pred EEEECHHHHHHHHHHHHHHCCCEEehhHHHHHHHHHHHhccccCCCCEEEEEECCCchhhccchhhHHHHHHhccC
Confidence 99999999999999999999999999999999999998876556899999999983 67789999877543
No 2
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=100.00 E-value=2.2e-67 Score=496.53 Aligned_cols=298 Identities=73% Similarity=1.179 Sum_probs=279.9
Q ss_pred cccchhhhhhhhccCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHH
Q 020805 4 ESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGI 83 (321)
Q Consensus 4 ~~~~~~~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~ 83 (321)
+.+++++++.+.+++|||+++++|++.+|.+||+|+|++|||||||||++.+++.++.++|.+++|.++||++|+||||+
T Consensus 109 ~~~~~~~~i~~~ig~TPLv~l~~Ls~~~g~~I~lK~E~lnptGSfKdRgA~~~i~~A~~~G~l~~g~~~VV~aSsGNhG~ 188 (430)
T 4aec_A 109 DGLNIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGI 188 (430)
T ss_dssp SSCSCBSSGGGGSSCCCEEECCGGGTTCSSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHH
T ss_pred cccchhhhhhccCCCCCeEEChhhhhhcCCeEEEEECCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCcEEEEECCCHHHH
Confidence 45678899999999999999999999889999999999999999999999999999999999999888899999999999
Q ss_pred HHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhc
Q 020805 84 GLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYET 163 (321)
Q Consensus 84 AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 163 (321)
|+|++|+++|++|+||||++++..|+++++.+||+|+.++...+++++.+.+++++++.++++|++||+||.+++.||.|
T Consensus 189 AlA~aAa~~Gl~~~IvmP~~~s~~k~~~~r~~GAeVv~v~~~~~~~~a~~~a~el~~~~~~~~~i~~~~np~~~~aG~~T 268 (430)
T 4aec_A 189 GLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYET 268 (430)
T ss_dssp HHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTEEECCTTTCTHHHHHHHHT
T ss_pred HHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHCCCEEEEECCCCChHHHHHHHHHHHHhcCCcEEecCCCCccHHHHHHHH
Confidence 99999999999999999999999999999999999999986556788999999999887789999999999998899999
Q ss_pred hHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEecCCCCccCCCCCCCcccccccCCCCccccccccc
Q 020805 164 TGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNII 243 (321)
Q Consensus 164 ~~~Ei~~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~~~~g~~~~~~~~gl~~~~~~~~~~~~~~ 243 (321)
++.||++|++++||+||+|+|+||+++|++.++|+.+|+++||||||++++.+..+++.++.++||+.+..|+.++.+++
T Consensus 269 ~a~EI~eQl~~~~D~vVvpvG~GGtlaGi~~~lk~~~p~~kVigVep~~s~~l~~g~~~~~~i~Gl~~~~~p~~l~~~~v 348 (430)
T 4aec_A 269 TGPEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVEPTESDILSGGKPGPHKIQGIGAGFIPKNLDQKIM 348 (430)
T ss_dssp HHHHHHHHTTSCEEEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGGCGGGTCCCCCCSCTTSCCSSCCTTCCTTTC
T ss_pred HHHHHHHHcCCCCCEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEEeCCCcHhhCCCccceeehhccCCCCcHHHHHHhC
Confidence 99999999977899999999999999999999999999999999999999988888888888899998878888999999
Q ss_pred CEEEEeCHHHHHHHHHHHHHhcCCeEecchHHHHHHHHHHHhcCCCCCCEEEEEecCC
Q 020805 244 DEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVVCSQFA 301 (321)
Q Consensus 244 d~~~~V~d~e~~~a~~~l~~~~Gi~~~pss~~a~aa~~~~~~~~~~~~~~vv~i~tgg 301 (321)
|+++.|+|+|+++++++|++++|+++||++|++++++++++++...++++||+|+||+
T Consensus 349 d~~v~Vsd~ea~~a~r~La~~eGi~vepssGaa~aAal~la~~~~~~g~~VV~Il~d~ 406 (430)
T 4aec_A 349 DEVIAISSEEAIETAKQLALKEGLMVGISSGAAAAAAIKVAKRPENAGKLIAVVFPSF 406 (430)
T ss_dssp SEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHTTSGGGTTCEEEEEECBB
T ss_pred CeEEEECHHHHHHHHHHHHHHCCCEEehHHHHHHHHHHHHHHhcCCCcCeEEEEECCC
Confidence 9999999999999999999999999999999999999998876545789999999974
No 3
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=100.00 E-value=7.8e-67 Score=482.44 Aligned_cols=298 Identities=50% Similarity=0.838 Sum_probs=274.8
Q ss_pred chhhhhhhhccCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHH
Q 020805 7 NIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLA 86 (321)
Q Consensus 7 ~~~~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~AlA 86 (321)
.++++|.+.+++|||+++++| +..|.+||+|+|++|||||||||++.+++.++.++|.+++|...||++|+||||+|+|
T Consensus 10 ~~~~~i~~~ig~TPL~~l~~l-~~~g~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~l~~g~~vvv~aSsGN~g~alA 88 (334)
T 3tbh_A 10 NVAQSIDQLIGQTPALYLNKL-NNTKAKVVLKMECENPMASVKDRLGFAIYDKAEKEGKLIPGKSIVVESSSGNTGVSLA 88 (334)
T ss_dssp SCCSSGGGGSSCCCEEECCTT-CCSSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHHHH
T ss_pred HHHHHHHHhcCCCCeEECCcc-cCCCCEEEEEeCCCCCccCcHHHHHHHHHHHHHHcCCCCCCCeEEEEeCCCHHHHHHH
Confidence 467789999999999999999 7788999999999999999999999999999999999888744369999999999999
Q ss_pred HHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhchHH
Q 020805 87 FMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGP 166 (321)
Q Consensus 87 ~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 166 (321)
++|+++|++|+||||++++..|+++++.+||+|+.++...+++++.+.+++++++.++++|++||+||.|++.||.|++.
T Consensus 89 ~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~~~i~~~~np~n~~~g~~t~~~ 168 (334)
T 3tbh_A 89 HLGAIRGYKVIITMPESMSLERRCLLRIFGAEVILTPAALGMKGAVAMAKKIVAANPNAVLADQFATKYNALIHEETTGP 168 (334)
T ss_dssp HHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEEECCTTTCHHHHHHHHHTHHH
T ss_pred HHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCchHHHHHHHHHHHhCCCEEECCccCChhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999997545788999999998887789999999999988899999999
Q ss_pred HHHhhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEecCCCCccCCCCCCCcccccccCCCCcccccccccCEE
Q 020805 167 ELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIIDEV 246 (321)
Q Consensus 167 Ei~~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~~~~g~~~~~~~~gl~~~~~~~~~~~~~~d~~ 246 (321)
||++|+++.||+||+|+|+|||++|++.++|+.+|+++||+|||++++.+..+++.++.++|++.+..|+.++++++|++
T Consensus 169 Ei~~q~~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~~~~~~~~~g~~~~~~~~gi~~~~~~~~~~~~~~d~~ 248 (334)
T 3tbh_A 169 EIWEQTNHNVDCFIAGVGTGGTLTGVARALKKMGSHARIVAVEPTESPVLSGGKPGPHKIQGIGPGFVPDVLDRSLIDEV 248 (334)
T ss_dssp HHHHHTTSCCSEEEEECSSSHHHHHHHHHHHHTTCCCEEEEEEETTSCTTTTCCCCCCSCTTSCCSSCCTTCCGGGCSEE
T ss_pred HHHHHhCCCCCEEEeccCCcHhHHHHHHHHHHhCCCCEEEEEeeCCchHhhCCCcCCeecCCCCCCcCCHHHHHHhCCEE
Confidence 99999977899999999999999999999999999999999999999988877777778899998888888999999999
Q ss_pred EEeCHHHHHHHHHHHHHhcCCeEecchHHHHHHHHHHHhcCCCCCCEEEEEecC-CCCCC
Q 020805 247 VQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVVCSQF-ACITS 305 (321)
Q Consensus 247 ~~V~d~e~~~a~~~l~~~~Gi~~~pss~~a~aa~~~~~~~~~~~~~~vv~i~tg-g~~~~ 305 (321)
+.|+|+|+++++++|++++|+++||+||++++++++++++...++++||+|+|| |..+.
T Consensus 249 ~~V~d~e~~~a~~~l~~~egi~~epssgaa~aa~~~~~~~~~~~g~~Vv~v~t~~g~ky~ 308 (334)
T 3tbh_A 249 LCVAGDDAIETALKLTRSDGVFCGFSGGANVYAALKIAERPEMEGKTIVTVIPSFGERYL 308 (334)
T ss_dssp EEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHSGGGTTCEEEEEECBBGGGGT
T ss_pred EEECHHHHHHHHHHHHHHcCeEEcHHHHHHHHHHHHHHHhccCCcCeEEEEECCCCcccc
Confidence 999999999999999999999999999999999999887643578999999998 44443
No 4
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=100.00 E-value=6.1e-66 Score=474.89 Aligned_cols=296 Identities=81% Similarity=1.239 Sum_probs=274.0
Q ss_pred chhhhhhhhccCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHH
Q 020805 7 NIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLA 86 (321)
Q Consensus 7 ~~~~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~AlA 86 (321)
.+++++.+.+++|||+++++|++..|.+||+|+|++|||||||||++.+++.++.++|.++||..+||++|+||||+|+|
T Consensus 4 ~~~~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~G~~~~~~~~vv~assGN~g~alA 83 (322)
T 1z7w_A 4 RIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLA 83 (322)
T ss_dssp CCCSSGGGGSSCCCEEECCGGGTTCSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHHHH
T ss_pred hhhhHHHHhcCCCCeEECccccccCCceEEEEecccCCCCchHHHHHHHHHHHHHHcCCCCCCCCEEEEeCCCHHHHHHH
Confidence 46789999999999999999998888899999999999999999999999999999999888877899999999999999
Q ss_pred HHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhchHH
Q 020805 87 FMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGP 166 (321)
Q Consensus 87 ~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 166 (321)
++|+++|++|+||||++++..|+++++.+||+|+.++.+.+++++.+.+++++++.++++|++||+|+.++..||.|++.
T Consensus 84 ~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~~~i~~~~n~~~~~~g~~t~~~ 163 (322)
T 1z7w_A 84 FTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGP 163 (322)
T ss_dssp HHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEEECCTTTCTHHHHHHHHTHHH
T ss_pred HHHHHcCCCEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCCHHHHHHHHHHHHHhCCCeEeCCCCCChhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999997545778999999999887789999999999997789999999
Q ss_pred HHHhhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEecCCCCccCCCCCCCcccccccCCCCcccccccccCEE
Q 020805 167 ELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIIDEV 246 (321)
Q Consensus 167 Ei~~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~~~~g~~~~~~~~gl~~~~~~~~~~~~~~d~~ 246 (321)
||++|++++||+||+|+|+||+++|++.++|+.+|.++||+|||++++.+..+++.++.++|++.+..|+.++.+.+|++
T Consensus 164 Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~ 243 (322)
T 1z7w_A 164 EIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVESAILSGGKPGPHKIQGIGAGFIPSVLNVDLIDEV 243 (322)
T ss_dssp HHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCGGGTCCCCCCSCTTSCCSSCCTTCCGGGCSEE
T ss_pred HHHHHhcCCCCEEEEecCccHhHHHHHHHHHHcCCCCEEEEEecCCCccccCCCCCCcccCcCcCCCCChhhhHHhCCEE
Confidence 99999976899999999999999999999999999999999999999888777666667889988777888888899999
Q ss_pred EEeCHHHHHHHHHHHHHhcCCeEecchHHHHHHHHHHHhcCCCCCCEEEEEecCCC
Q 020805 247 VQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVVCSQFAC 302 (321)
Q Consensus 247 ~~V~d~e~~~a~~~l~~~~Gi~~~pss~~a~aa~~~~~~~~~~~~~~vv~i~tgg~ 302 (321)
+.|+|+|+++++++|++++|+++||+||+++++++++.++...++++||+|+||++
T Consensus 244 ~~V~d~e~~~a~~~l~~~~gi~~~pssga~~aaa~~~~~~~~~~~~~vv~i~tg~g 299 (322)
T 1z7w_A 244 VQVSSDESIDMARQLALKEGLLVGISSGAAAAAAIKLAQRPENAGKLFVAIFPSFG 299 (322)
T ss_dssp EEECHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHHTSGGGTTCEEEEEECBBG
T ss_pred EEECHHHHHHHHHHHHHHcCceEchhHHHHHHHHHHHHHhcCCCCCeEEEEECCCC
Confidence 99999999999999999999999999999999999987654346889999999964
No 5
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=100.00 E-value=4.3e-65 Score=467.54 Aligned_cols=302 Identities=54% Similarity=0.898 Sum_probs=270.6
Q ss_pred cccchhhhhhhhccCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHH
Q 020805 4 ESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGI 83 (321)
Q Consensus 4 ~~~~~~~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~ 83 (321)
|.++++++|.+.+++|||+++++|++..+.+||+|+|++|||||||||++.+++.++.++|.+.+| .+||++|+||||+
T Consensus 2 ~~~~~~~~i~~~~~~TPL~~~~~l~~~~g~~i~~K~E~~~ptgSfK~R~a~~~l~~a~~~g~~~~g-~~vv~assGN~g~ 80 (313)
T 2q3b_A 2 SHMSIAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLIKPD-TIILEPTSGNTGI 80 (313)
T ss_dssp --CCCCSSGGGGSCCCCEEECSSSCTTCCSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCTT-CEEEEECSSHHHH
T ss_pred CccchhhhHHHhcCCCceEECcccccccCcEEEEEehhcCCCCcHHHHHHHHHHHHHHHcCCCCCC-CEEEEeCCCHHHH
Confidence 456788999999999999999999988889999999999999999999999999999999987776 5799999999999
Q ss_pred HHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhc
Q 020805 84 GLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYET 163 (321)
Q Consensus 84 AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 163 (321)
|+|++|+++|++|+||||++++..|+++++.+||+|+.++...+++++.+.+++++++.+..+++++|+||.++..||.|
T Consensus 81 alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~n~~~~~~~~~t 160 (313)
T 2q3b_A 81 ALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGADGMSGAIAKAEELAKTDQRYFVPQQFENPANPAIHRVT 160 (313)
T ss_dssp HHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEECCCTTTCTHHHHHHHHT
T ss_pred HHHHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHHHHhCCCEEeCCCCCChhhHHHHHHH
Confidence 99999999999999999999999999999999999999997545788999999999887555889999999996678999
Q ss_pred hHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEecCCCCccCCCCCCCcccccccCCCCccccccccc
Q 020805 164 TGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNII 243 (321)
Q Consensus 164 ~~~Ei~~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~~~~g~~~~~~~~gl~~~~~~~~~~~~~~ 243 (321)
++.||++|+++++|+||+|+|+||+++|++.++|+.+|.++||+|||++++.+..++..++.++|++.+..|+.+....+
T Consensus 161 ~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~ 240 (313)
T 2q3b_A 161 TAEEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEPAASPVLSGGQKGPHPIQGIGAGFVPPVLDQDLV 240 (313)
T ss_dssp HHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTSCTTTTCCCCCCCCTTSCCSSCCTTCCGGGC
T ss_pred HHHHHHHHcCCCCCEEEEccCcchhHHHHHHHHHHhCCCCEEEEEeeCCCccccCCCCCCcccCCcCCCCCChhhhHhhc
Confidence 99999999976799999999999999999999999999999999999999887655555667788887777888888889
Q ss_pred CEEEEeCHHHHHHHHHHHHHhcCCeEecchHHHHHHHHHHHhcCCCCCCEEEEEecCC-CCCCH
Q 020805 244 DEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVVCSQFA-CITSD 306 (321)
Q Consensus 244 d~~~~V~d~e~~~a~~~l~~~~Gi~~~pss~~a~aa~~~~~~~~~~~~~~vv~i~tgg-~~~~~ 306 (321)
|+++.|+|+|+++++++|++++|+++||+||++++++++++++...++++||+++||+ ..+.+
T Consensus 241 d~~~~v~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~~~~~~~~vv~v~~~~g~ky~~ 304 (313)
T 2q3b_A 241 DEIITVGNEDALNVARRLAREEGLLVGISSGAATVAALQVARRPENAGKLIVVVLPDFGERYLS 304 (313)
T ss_dssp CEEEEECHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHHTCGGGTTCEEEEEECBBSGGGC-
T ss_pred cEEEEECHHHHHHHHHHHHHHcCceEchHHHHHHHHHHHHHHhcCCCCCEEEEEECCCCccccc
Confidence 9999999999999999999999999999999999999998765423688999888874 34433
No 6
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=100.00 E-value=2.8e-64 Score=459.94 Aligned_cols=282 Identities=43% Similarity=0.721 Sum_probs=260.1
Q ss_pred hhhhhhccCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHH
Q 020805 10 KDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMA 89 (321)
Q Consensus 10 ~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~AlA~aa 89 (321)
++|.+.+++|||+++++|++..|.+||+|+|++|||||||||++.+++.++.++|.+.+| .+||++|+||||+|+|++|
T Consensus 2 ~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~~~~g-~~vv~~ssGN~g~a~A~~a 80 (303)
T 2v03_A 2 STLEQTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPG-DVLIEATSGNTGIALAMIA 80 (303)
T ss_dssp CSGGGGSSCCCEEECSSSSCSSSCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCTT-CEEEEECSSHHHHHHHHHH
T ss_pred cchHhhcCCCCcEECcccccccCCEEEEEeccCCCCCCcHHHHHHHHHHHHHHcCCCCCC-CEEEEECCcHHHHHHHHHH
Confidence 468899999999999999988889999999999999999999999999999999987776 6799999999999999999
Q ss_pred HHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhchHHHHH
Q 020805 90 AAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELW 169 (321)
Q Consensus 90 ~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Ei~ 169 (321)
+++|++|+||||++++..|+++++.+||+|+.++...+++++.+.+++++++.+++ |++||+||.++..||.|++.||+
T Consensus 81 ~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~n~~~~~~g~~t~~~Ei~ 159 (303)
T 2v03_A 81 ALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRGEGK-LLDQFNNPDNPYAHYTTTGPEIW 159 (303)
T ss_dssp HHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHTTSCE-ECCTTTCTHHHHHHHHTHHHHHH
T ss_pred HHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCc-ccCCcCChhhHHHhcCCcHHHHH
Confidence 99999999999999999999999999999999997556888999999998885577 99999999987779999999999
Q ss_pred hhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEecCCCCccCCCCCCCcccccccCCCCcccccccccCEEEEe
Q 020805 170 KGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQV 249 (321)
Q Consensus 170 ~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~~~~g~~~~~~~~gl~~~~~~~~~~~~~~d~~~~V 249 (321)
+|+++.+|+||+|+|+||+++|++.++|+.+|.++||+|||++++.+.. +++++.+..|+.++++.+|+++.|
T Consensus 160 ~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~~~~~~-------~~gl~~~~~~~~~~~~~~d~~~~V 232 (303)
T 2v03_A 160 QQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEGSSIPG-------IRRWPTEYLPGIFNASLVDEVLDI 232 (303)
T ss_dssp HHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEECTTCCCTT-------CCCCCGGGCCTTCCGGGCSEEEEE
T ss_pred HHhCCCCCEEEEEeCccHhHHHHHHHHHHhCCCCEEEEEcCCCCccccc-------CCcCCCCCCCcccchHHCCEEEEE
Confidence 9997679999999999999999999999999999999999999987753 566766666777888889999999
Q ss_pred CHHHHHHHHHHHHHhcCCeEecchHHHHHHHHHHHhcCCCCCCEEEEEecCCC
Q 020805 250 SSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVVCSQFAC 302 (321)
Q Consensus 250 ~d~e~~~a~~~l~~~~Gi~~~pss~~a~aa~~~~~~~~~~~~~~vv~i~tgg~ 302 (321)
+|+|+++++++|++++|+++||+||+++++++++.++. ++++||+|+|||+
T Consensus 233 ~d~e~~~a~~~l~~~~gi~~~pssa~alaa~~~~~~~~--~~~~vv~i~tg~~ 283 (303)
T 2v03_A 233 HQRDAENTMRELAVREGIFCGVSSGGAVAGALRVAAAN--PDAVVVAIICDRG 283 (303)
T ss_dssp CHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHHS--TTCEEEEEECBBS
T ss_pred CHHHHHHHHHHHHHHcCceEcHHHHHHHHHHHHHHHHC--CCCeEEEEECCCC
Confidence 99999999999999999999999999999999988764 7889999999975
No 7
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=100.00 E-value=6.4e-65 Score=468.15 Aligned_cols=287 Identities=38% Similarity=0.601 Sum_probs=263.7
Q ss_pred cchhhhhhhhccCCcceecccccCC-------CCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCC
Q 020805 6 SNIAKDVTELIGNTPLVYLNNIVNG-------CVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTS 78 (321)
Q Consensus 6 ~~~~~~i~~~~~~TPL~~~~~l~~~-------~g~~v~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~Ss 78 (321)
|+++++|.+.+++|||+++++|++. .+.+||+|+|++|||||||||++.+++.++.++|.+.++ ++||++|+
T Consensus 3 ~~~~~~i~~~ig~TPL~~~~~l~~~~~~~~~~~g~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~l~~~-~~vv~aSs 81 (325)
T 3dwg_A 3 MTRYDSLLQALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPG-ATILEPTS 81 (325)
T ss_dssp CCEESSTGGGCSCCCEEECTTTSSBSSCBTTBCCEEEEEEETTSSTTSBTTHHHHHHHHHHHHHTTCCCTT-CEEEEECS
T ss_pred cccccCHHHhcCCCCcEEccccchhhcccccCCCcEEEEEECCCCCCCChHHHHHHHHHHHHHHcCCCCCC-CEEEEeCC
Confidence 5678899999999999999999987 678999999999999999999999999999999988876 67999999
Q ss_pred ChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCCCCCCcchh
Q 020805 79 GNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPK 158 (321)
Q Consensus 79 GN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 158 (321)
||||+|+|++|+++|++|+||||++++..|+++++.+||+|+.++...+++++.+.+++++++.++++|++||+||.++.
T Consensus 82 GN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~np~~~~ 161 (325)
T 3dwg_A 82 GNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTD 161 (325)
T ss_dssp SHHHHHHHHHHHHHTCEEEEEEESSSCHHHHHHHHHHTCEEEEECSTTTHHHHHHHHHHHHHHCTTSBCCCTTTCHHHHH
T ss_pred cHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEeCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999976668899999999999886699999999999976
Q ss_pred hhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEecCCCCccCCCCCCCcccccccCCCCcccc
Q 020805 159 IHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGIGAGFVPGVL 238 (321)
Q Consensus 159 ~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~~~~g~~~~~~~~gl~~~~~~~~~ 238 (321)
.||.+++.||++|++. ||+||+|+|+|||++|++.++|+.+|.++||+|||++++.+. .+.+++.+..|+.+
T Consensus 162 ~g~~t~~~Ei~~q~~~-~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~~~~~~~~-------~~~~i~~~~~~~~~ 233 (325)
T 3dwg_A 162 SHYCGTGPELLADLPE-ITHFVAGLGTTGTLMGTGRFLREHVANVKIVAAEPRYGEGVY-------ALRNMDEGFVPELY 233 (325)
T ss_dssp HHHHTHHHHHHHHCTT-CCEEEEECSSSHHHHHHHHHHHHHSTTCEEEEEEEECCGGGG-------CCSSGGGCCCCTTC
T ss_pred HHHHHHHHHHHHhcCC-CCEEEEecCchHHHHHHHHHHHHhCCCCEEEEEeeCCCcchh-------ccCcccCCcCcccc
Confidence 8999999999999964 999999999999999999999999999999999999997763 35567766678888
Q ss_pred cccccCEEEEeCHHHHHHHHHHHHHhcCCeEecchHHHHHHHHHHHhcCCCCCCE--EEEEecCC
Q 020805 239 EVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKL--IVVCSQFA 301 (321)
Q Consensus 239 ~~~~~d~~~~V~d~e~~~a~~~l~~~~Gi~~~pss~~a~aa~~~~~~~~~~~~~~--vv~i~tgg 301 (321)
+++.+|+++.|+|+|+++++++|++++|+++||+||++++++++++++...++++ ||+|+||+
T Consensus 234 ~~~~~d~~~~V~d~e~~~a~~~l~~~egi~~epssa~a~aa~~~~~~~~~~~g~~~~Vv~i~~g~ 298 (325)
T 3dwg_A 234 DPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAALGVGAGALAAGERADIALVVADA 298 (325)
T ss_dssp CGGGCSEEEEEEHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECBB
T ss_pred cHhhCCeEEEECHHHHHHHHHHHHHHcCceechhHHHHHHHHHHHHHHhccCCCCCeEEEEECCC
Confidence 8899999999999999999999999999999999999999999987653234666 99999995
No 8
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=100.00 E-value=1e-64 Score=470.00 Aligned_cols=297 Identities=41% Similarity=0.724 Sum_probs=271.2
Q ss_pred cccchhhhhhhhccCCcceecccccC----CCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCC
Q 020805 4 ESSNIAKDVTELIGNTPLVYLNNIVN----GCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSG 79 (321)
Q Consensus 4 ~~~~~~~~i~~~~~~TPL~~~~~l~~----~~g~~v~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsG 79 (321)
++.++++++.+.+++|||+++++|++ ..|.+||+|+|++|||||||||++.+++.++.++|.+++| .+||++|+|
T Consensus 9 ~~~~~~~~i~~~~g~TPL~~~~~l~~~~~~~~g~~v~~K~E~~~ptGSfKdR~a~~~l~~a~~~g~~~~g-~~vv~aSsG 87 (343)
T 2pqm_A 9 PRKRIYHNILETIGGTPLVELHGVTEHPRIKKGTRILVKLEYFNPMSSVKDRVGFNIVYQAIKDGRLKPG-MEIIESTSG 87 (343)
T ss_dssp CCCCEESSGGGGSSCCCEEECCGGGCSTTSCTTCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHHTSSCTT-CEEEEECSS
T ss_pred CchhHHHHHHhhcCCCCeEECCccccccccccCcEEEEEeccCCCCCChHHHHHHHHHHHHHHcCCCCCC-CEEEEECCc
Confidence 34567889999999999999999988 7789999999999999999999999999999999987776 579999999
Q ss_pred hHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCe-EEcCCCCCCcchh
Q 020805 80 NTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNA-YMLQQFENPANPK 158 (321)
Q Consensus 80 N~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~ 158 (321)
|||+|+|++|+++|++|+||||++++..|+++++.+||+|+.++...+++++.+.+++++++.+.. |+++||+||.+++
T Consensus 88 N~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~~~~~n~~n~~ 167 (343)
T 2pqm_A 88 NTGIALCQAGAVFGYRVNIAMPSTMSVERQMIMKAFGAELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDNTA 167 (343)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTTEEECCTTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCcEEECCCCCChhHHH
Confidence 999999999999999999999999999999999999999999997545788999999999887555 7789999999878
Q ss_pred hhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEecCCCCccCCCCCCCcccccccCCCCcccc
Q 020805 159 IHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGIGAGFVPGVL 238 (321)
Q Consensus 159 ~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~~~~g~~~~~~~~gl~~~~~~~~~ 238 (321)
.||.+++ ||++|++++||+||+|+|+||+++|++.++|+.+|.++||+|||++++.+..++..++.++|++.+..|+.+
T Consensus 168 ~g~~t~~-Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigVe~~~~~~~~~~~~~~~~~~gl~~~~~~~~~ 246 (343)
T 2pqm_A 168 AHHYTAN-EIWEDTDGEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEPEESAVLEGKAKGPHGIQGIGAGFIPDIY 246 (343)
T ss_dssp HHHHHHH-HHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCTTTTCCCCCCCCTTCCCSSCCTTC
T ss_pred HHHHHHH-HHHHHcCCCCCEEEEecCCchhHHHHHHHHHHcCCCCEEEEEecCCCcccccCCCCCeecCccCCCCCCHHH
Confidence 8999999 999999767999999999999999999999999999999999999998887666666778899877778888
Q ss_pred cccccCEEEEeCHHHHHHHHHHHHHhcCCeEecchHHHHHHHHHHHhcCCCCCCEEEEEecCCC
Q 020805 239 EVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVVCSQFAC 302 (321)
Q Consensus 239 ~~~~~d~~~~V~d~e~~~a~~~l~~~~Gi~~~pss~~a~aa~~~~~~~~~~~~~~vv~i~tgg~ 302 (321)
....+|+++.|+|+|+++++++|++++|+++||+||++++++++++++...++++||+|+||+.
T Consensus 247 ~~~~~d~~~~Vsd~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~~~~~~~~vv~i~tg~g 310 (343)
T 2pqm_A 247 KKEFVDEIIPIKTQDAWKMARAVVKYDGIMCGMSSGAAILAGLKEAEKPENEGKTIVIIVPSCG 310 (343)
T ss_dssp CGGGCCEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHTSGGGTTCEEEEEECBBG
T ss_pred HHHhCCeEEEECHHHHHHHHHHHHHHhCCeEchhHHHHHHHHHHHHHhcCCCCCeEEEEEcCCC
Confidence 8889999999999999999999999999999999999999999987654236889999999963
No 9
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=100.00 E-value=1.2e-64 Score=465.19 Aligned_cols=293 Identities=53% Similarity=0.816 Sum_probs=264.9
Q ss_pred chhhhhhhhccCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHH
Q 020805 7 NIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLA 86 (321)
Q Consensus 7 ~~~~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~AlA 86 (321)
+++++|.+.+++|||+++++| + .|.+||+|+|++|||||||||++.+++.++.++|.+.++ .+||++|+||||+|+|
T Consensus 2 ~~~~~i~~~~~~TPL~~l~~l-~-~g~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~~~~~-~~vv~~ssGN~g~a~A 78 (316)
T 1y7l_A 2 AIYADNSYSIGNTPLVRLKHF-G-HNGNVVVKIEGRNPSYSVKCRIGANMVWQAEKDGTLTKG-KEIVDATSGNTGIALA 78 (316)
T ss_dssp CCCSSGGGGCCCCCEEECSSS-S-STTCEEEEETTSSGGGBTHHHHHHHHHHHHHHTTSSCTT-CEEEESCCSHHHHHHH
T ss_pred cchhhhHHhcCCCCcEECccC-C-CCCEEEEEeccCCCCCChHHHHHHHHHHHHHHcCCCCCC-CEEEEeCCcHHHHHHH
Confidence 467889999999999999999 6 788999999999999999999999999999999987776 6899999999999999
Q ss_pred HHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCe-EEcCCCCCCcchhhhhhchH
Q 020805 87 FMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNA-YMLQQFENPANPKIHYETTG 165 (321)
Q Consensus 87 ~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~ 165 (321)
++|+++|++|+||||++++..|+++++.+||+|+.++.+.+++++.+.+++++++.++. |+++||+||.++..||.|++
T Consensus 79 ~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~ 158 (316)
T 1y7l_A 79 YVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASDPSRYVMLKQFENPANPQIHRETTG 158 (316)
T ss_dssp HHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTTEECCCTTTCTHHHHHHHHTHH
T ss_pred HHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCCCCHHHHHHHHHHHHHhCCCCEEECCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999997544788999999999887556 88999999998777999999
Q ss_pred HHHHhhhCCCCCEEEEecCCchhHHHHHHHHHhcC-CCcEEEEEecCCCCccCC---CC---CCCcccccccCCCCcccc
Q 020805 166 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN-PNIKLYGIEPTESPVLSG---GK---PGPHKIQGIGAGFVPGVL 238 (321)
Q Consensus 166 ~Ei~~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~-~~~~vigv~~~~~~~~~~---g~---~~~~~~~gl~~~~~~~~~ 238 (321)
.||++|++++||+||+|+|+||+++|++.++|+++ |.++||+|||++++.+.. |+ ..++.++|++.+..|+.+
T Consensus 159 ~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~~~~~~~~~~~~g~~~~~~~~~~~gi~~~~~~~~~ 238 (316)
T 1y7l_A 159 PEIWKDTDGKVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAVEPVESPVISQTLAGEEVKPGPHKIQGIGAGFIPKNL 238 (316)
T ss_dssp HHHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHTSCCCCEEEEEEETTSCHHHHHHHTCCCCCCCCSCTTSCCSSCCTTC
T ss_pred HHHHHHcCCCCCEEEEeCCccccHHHHHHHHHHhCCCCCEEEEEecCCCccccccccCCccCCCCcccCcCCCCCCCchh
Confidence 99999997669999999999999999999999998 999999999999976542 22 234567888877778888
Q ss_pred cccccCEEEEeCHHHHHHHHHHHHHhcCCeEecchHHHHHHHHHHHhcCCCCCCEEEEEecCCC
Q 020805 239 EVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVVCSQFAC 302 (321)
Q Consensus 239 ~~~~~d~~~~V~d~e~~~a~~~l~~~~Gi~~~pss~~a~aa~~~~~~~~~~~~~~vv~i~tgg~ 302 (321)
+.+.+|+++.|+|+|+++++++|++++|+++||+||++++++++++++...++++||+|+||+.
T Consensus 239 ~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epssa~~laa~~~~~~~~~~~~~~vv~i~tg~g 302 (316)
T 1y7l_A 239 DLSIIDRVETVDSDTALATARRLMAEEGILAGISSGAAVAAADRLAKLPEFADKLIVVILPSAS 302 (316)
T ss_dssp CGGGCCEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHTSGGGTTCEEEEEECBBC
T ss_pred hHhhCCEEEEECHHHHHHHHHHHHHhhCCeEcHHHHHHHHHHHHHHHhcCCCCCeEEEEECCCC
Confidence 8889999999999999999999999999999999999999999987654236889999999965
No 10
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=100.00 E-value=9.2e-65 Score=464.36 Aligned_cols=293 Identities=55% Similarity=0.864 Sum_probs=238.6
Q ss_pred chhhhhhhhccCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHH
Q 020805 7 NIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLA 86 (321)
Q Consensus 7 ~~~~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~AlA 86 (321)
+++++|.+.+++|||+++++|++..|.+||+|+|++|||||||||++.+++.++.++|.+.+| ++||++|+||||+|+|
T Consensus 3 ~~~~~i~~~~~~TPL~~l~~l~~~~g~~i~~K~E~~~ptgSfK~R~a~~~l~~a~~~g~~~~g-~~vv~assGN~g~a~A 81 (308)
T 2egu_A 3 RTVNSITELIGDTPAVKLNRIVDEDSADVYLKLEFMNPGSSVKDRIALAMIEAAEKAGKLKPG-DTIVEPTSGNTGIGLA 81 (308)
T ss_dssp CCCSCGGGGSSCCCEEECCSSSCTTSCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCTT-CEEEEECCHHHHHHHH
T ss_pred hHHHHHHHhcCCCCeEECCcccccCCCEEEEEecccCCCCChHHHHHHHHHHHHHHcCCCCCC-CEEEEeCCCHHHHHHH
Confidence 367889999999999999999988889999999999999999999999999999999987776 5799999999999999
Q ss_pred HHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhchHH
Q 020805 87 FMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGP 166 (321)
Q Consensus 87 ~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 166 (321)
++|+++|++|+||||++++..|+++++.+||+|+.++...+++++.+.+++++++. ++++++||+||.++..||.|++.
T Consensus 82 ~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~l~~~~-~~~~~~~~~n~~~~~~g~~t~~~ 160 (308)
T 2egu_A 82 MVAAAKGYKAVLVMPDTMSLERRNLLRAYGAELVLTPGAQGMRGAIAKAEELVREH-GYFMPQQFKNEANPEIHRLTTGK 160 (308)
T ss_dssp HHHHHHTCEEEEEEESCSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHH-CCBCC--------------CHHH
T ss_pred HHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHHC-cCCcCCcCCChhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999997545788999999998887 45888999999987789999999
Q ss_pred HHHhhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEecCCCCccCCCCCCCcccccccCCCCcccccccccCEE
Q 020805 167 ELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIIDEV 246 (321)
Q Consensus 167 Ei~~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~~~~g~~~~~~~~gl~~~~~~~~~~~~~~d~~ 246 (321)
||++|+++++|+||+|+|+||+++|++.++|+.+|.++||+|||++++.+..++..++.++|++.+..|+.+....+|++
T Consensus 161 Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigve~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~ 240 (308)
T 2egu_A 161 EIVEQMGDQLDAFVAGVGTGGTITGAGKVLREAYPNIKIYAVEPADSPVLSGGKPGPHKIQGIGAGFVPDILDTSIYDGV 240 (308)
T ss_dssp HHHHHHTTCCCEEEEEGGGTHHHHHHHHHHHHHCTTCEEEEEEECC-----------------------CCCCCCSCSEE
T ss_pred HHHHHcCCCCCEEEEeeCCchhHHHHHHHHHHhCCCCEEEEEEeCCCccccCCCCCCcccCccCCCCCCHhHHHHhcCeE
Confidence 99999976799999999999999999999999999999999999999877765555667788887767777888889999
Q ss_pred EEeCHHHHHHHHHHHHHhcCCeEecchHHHHHHHHHHHhcCCCCCCEEEEEecCCC
Q 020805 247 VQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVVCSQFAC 302 (321)
Q Consensus 247 ~~V~d~e~~~a~~~l~~~~Gi~~~pss~~a~aa~~~~~~~~~~~~~~vv~i~tgg~ 302 (321)
+.|+|+|+++++++|++++|+++||+||++++++++++++. .++++||+|+||+.
T Consensus 241 ~~v~d~e~~~a~~~l~~~~gi~~epssa~a~aa~~~~~~~~-~~~~~vv~i~tg~g 295 (308)
T 2egu_A 241 ITVTTEEAFAAARRAAREEGILGGISSGAAIHAALKVAKEL-GKGKKVLAIIPSNG 295 (308)
T ss_dssp EEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHHH-CTTCEEEEEECBBG
T ss_pred EEECHHHHHHHHHHHHHHhCceEcHHHHHHHHHHHHHHHhc-CCCCeEEEEECCCC
Confidence 99999999999999999999999999999999999987754 47889999999964
No 11
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=100.00 E-value=1.2e-63 Score=456.24 Aligned_cols=289 Identities=51% Similarity=0.823 Sum_probs=264.7
Q ss_pred hhhhhccCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCe--EEEeeCCChHHHHHHHH
Q 020805 11 DVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGES--VLIEPTSGNTGIGLAFM 88 (321)
Q Consensus 11 ~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~--~vv~~SsGN~g~AlA~a 88 (321)
.|.+.+++|||+++++|++..|.+||+|+|++|||||||||++.+++.++.++|.+++| + +||++|+||||+|+|++
T Consensus 2 ~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~~~~g-~~~~vv~assGN~g~a~A~~ 80 (304)
T 1ve1_A 2 RVEGAIGKTPVVRLAKVVEPDMAEVWVKLEGLNPGGSIKDRPAWYMIKDAEERGILRPG-SGQVIVEPTSGNTGIGLAMI 80 (304)
T ss_dssp CGGGGCCCCCEEECCSSSCTTSCEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTSCCTT-SCCEEEESCCSHHHHHHHHH
T ss_pred ChHHhcCCCCcEECcccccccCCEEEEEecccCCCCcHHHHHHHHHHHHHHHcCCCCCC-CccEEEEeCCcHHHHHHHHH
Confidence 36788999999999999988889999999999999999999999999999999987776 5 79999999999999999
Q ss_pred HHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhchHHHH
Q 020805 89 AAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPEL 168 (321)
Q Consensus 89 a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Ei 168 (321)
|+++|++|+||||++++..|+++++.+||+|+.++.+.+++++.+.+++++++ ++++|++||+||.++..||.|++.||
T Consensus 81 a~~~G~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~~~~~~~~~~~~a~~l~~~-~~~~~~~~~~n~~~~~g~~~t~~~Ei 159 (304)
T 1ve1_A 81 AASRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPERRMLAAREEALRLKEE-LGAFMPDQFKNPANVRAHYETTGPEL 159 (304)
T ss_dssp HHHHTCEEEEEEETTCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHH-HTCBCCCTTTCHHHHHHHHHTHHHHH
T ss_pred HHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHhc-CCCEeCCCCCChhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999754478899999999887 47889999999998555589999999
Q ss_pred HhhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEecCCCCccCCCCCCCcccccccCCCCcccccccccCEEEE
Q 020805 169 WKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQ 248 (321)
Q Consensus 169 ~~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~~~~g~~~~~~~~gl~~~~~~~~~~~~~~d~~~~ 248 (321)
++|+++++|+||+|+|+||+++|++.++|+.+|.++||+|||++++.+..+++.++.++|++.+..|+.++++.+|+++.
T Consensus 160 ~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~~~~~~~~~g~~~~~~~~gl~~~~~~~~~~~~~~d~~~~ 239 (304)
T 1ve1_A 160 YEALEGRIDAFVYGSGTGGTITGVGRYLKERIPHVKVIAVEPARSNVLSGGKMGQHGFQGMGPGFIPENLDLSLLDGVIQ 239 (304)
T ss_dssp HHHTTTCCSEEEEECSSSHHHHHHHHHHHTTCTTCEEEEEEEGGGCTTTTCCCCCCSCTTSCCSSCCTTCCGGGCSEEEE
T ss_pred HHHcCCCCCEEEEecCCchhHHHHHHHHHHhCCCCEEEEEecCCCccccCCCCCCcccCCCCCCCCChhhhhhhCCEEEE
Confidence 99997679999999999999999999999999999999999999988876666667778888877788888889999999
Q ss_pred eCHHHHHHHHHHHHHhcCCeEecchHHHHHHHHHHHhcCCCCCCEEEEEecCCC
Q 020805 249 VSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVVCSQFAC 302 (321)
Q Consensus 249 V~d~e~~~a~~~l~~~~Gi~~~pss~~a~aa~~~~~~~~~~~~~~vv~i~tgg~ 302 (321)
|+|+|+++++++|++++|+++||+||++++++++++++. .++++||+|+||+.
T Consensus 240 V~d~e~~~a~~~l~~~~gi~~epssa~a~aa~~~~~~~~-~~~~~vv~i~tg~g 292 (304)
T 1ve1_A 240 VWEEDAFPLARRLAREEGLFLGMSSGGIVWAALQVAREL-GPGKRVACISPDGG 292 (304)
T ss_dssp ECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHHH-CTTCEEEEEECBBS
T ss_pred ECHHHHHHHHHHHHHHhCcEEcHHHHHHHHHHHHHHHhc-CCCCeEEEEECCCC
Confidence 999999999999999999999999999999999987653 36889999999975
No 12
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=100.00 E-value=1.9e-62 Score=447.86 Aligned_cols=283 Identities=52% Similarity=0.767 Sum_probs=259.1
Q ss_pred hhhhhccCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHH
Q 020805 11 DVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAA 90 (321)
Q Consensus 11 ~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~AlA~aa~ 90 (321)
.+.+.+++|||+++++|+ .+||+|+|++|||||||||++.+++.++.++|.+.+ .||++|+||||+|+|++|+
T Consensus 13 ~~~~~~~~TPL~~l~~l~----~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~~~~---~vv~aSsGN~g~a~A~aa~ 85 (303)
T 1o58_A 13 MMERLIGSTPIVRLDSID----SRIFLKLEKNNPGGSVKDRPALFMILDAEKRGLLKN---GIVEPTSGNMGIAIAMIGA 85 (303)
T ss_dssp HHHHHSCCCCEEECTTTC----TTEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCCTT---CEEEECSSHHHHHHHHHHH
T ss_pred hhhhccCCCCeEECccCC----ceEEEEecCCCCCCChHHHHHHHHHHHHHHcCCCCC---CEEEECchHHHHHHHHHHH
Confidence 478899999999999886 589999999999999999999999999999887554 3999999999999999999
Q ss_pred HcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhchHHHHHh
Q 020805 91 AKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK 170 (321)
Q Consensus 91 ~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Ei~~ 170 (321)
++|++|+||||++++..|+++++.+||+|+.++++.+++++.+.+++++++. ++||++||+||.++..||.|++.||++
T Consensus 86 ~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~n~~~~~~g~~t~~~Ei~~ 164 (303)
T 1o58_A 86 KRGHRVILTMPETMSVERRKVLKMLGAELVLTPGELGMKGAVEKALEISRET-GAHMLNQFENPYNVYSHQFTTGPEILK 164 (303)
T ss_dssp HHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHH-CCBCCCTTTCHHHHHHHHHTHHHHHHH
T ss_pred HcCCcEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhc-CeEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999997544788999999998887 688899999999877799999999999
Q ss_pred hhCCCCCEEEEecCCchhHHHHHHHHHhcCCC-cEEEEEecCCCCccCCCCCCCcccccccCCCCcccccccccCEEEEe
Q 020805 171 GSGGRIDALVSGIGTGGTITGAGKFLKEKNPN-IKLYGIEPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQV 249 (321)
Q Consensus 171 ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~-~~vigv~~~~~~~~~~g~~~~~~~~gl~~~~~~~~~~~~~~d~~~~V 249 (321)
|+++.||+||+|+|+||+++|++.++|+.+|. ++||+|||++++.+..++..++.++|++.+..|+.++.+.+|+++.|
T Consensus 165 q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~~vigve~~~~~~~~~g~~~~~~~~gi~~~~~~~~~~~~~~d~~~~V 244 (303)
T 1o58_A 165 QMDYQIDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAVEPAKSPVLSGGQPGKHAIQGIGAGFVPKILDRSVIDEVITV 244 (303)
T ss_dssp HTTTCCSEEEEECSSSHHHHHHHHHHHHHHGGGSEEEEEEETTSCTTTTCCCCCCCCTTSCCSSCCTTCCGGGCCEEEEE
T ss_pred HcCCCCCEEEEeeCCcccHHHHHHHHHHhCCCCCEEEEEecCCCccccCCCCCCeecCcCCCCCcCHHHHHHhCCeEEEE
Confidence 99766999999999999999999999999999 99999999999888777666677888887777888888889999999
Q ss_pred CHHHHHHHHHHHHHhcCCeEecchHHHHHHHHHHHhcCCCCCCEEEEEecCCC
Q 020805 250 SSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVVCSQFAC 302 (321)
Q Consensus 250 ~d~e~~~a~~~l~~~~Gi~~~pss~~a~aa~~~~~~~~~~~~~~vv~i~tgg~ 302 (321)
+|+|+++++++|++++|+++||+||+++++++++.++. .++++||+|+||+.
T Consensus 245 ~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~~-~~~~~vv~i~tg~g 296 (303)
T 1o58_A 245 EDEEAYEMARYLAKKEGLLVGISSGANVAAALKVAQKL-GPDARVVTVAPDHA 296 (303)
T ss_dssp CHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHTS-CTTCCEEEEECBBG
T ss_pred CHHHHHHHHHHHHHHcCceEcHHHHHHHHHHHHHHHHc-CCCCEEEEEECCCC
Confidence 99999999999999999999999999999999987753 36889999999975
No 13
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=100.00 E-value=1.9e-61 Score=458.33 Aligned_cols=307 Identities=39% Similarity=0.620 Sum_probs=268.3
Q ss_pred chhhhhhhhccCCcceecccccCCCC--ceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHH
Q 020805 7 NIAKDVTELIGNTPLVYLNNIVNGCV--ARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIG 84 (321)
Q Consensus 7 ~~~~~i~~~~~~TPL~~~~~l~~~~g--~~v~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~A 84 (321)
+++++|...+++|||+++++|++.+| ++||+|+|++|||||||||++.+++.++.++|.+.++ .+||++|+||||+|
T Consensus 97 ~~~~~i~~~ig~TPLv~l~~Ls~~~G~~~~v~lK~E~~nptGSfKdR~a~~~i~~a~~~G~l~~g-~tVV~aSsGN~G~A 175 (435)
T 1jbq_A 97 KILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPG-DTIIEPTSGNTGIG 175 (435)
T ss_dssp SEESSGGGGSSCCCEEECCSHHHHTTCCSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHHTCSCTT-CEEEEECSSHHHHH
T ss_pred hHHHHHHhhCCCCCeEECcchhhHhCCCceEEEEECCCCCcCCHHHHHHHHHHHHHHHcCCCCCC-CEEEEeCCCHHHHH
Confidence 45678899999999999999987766 6999999999999999999999999999999988876 67999999999999
Q ss_pred HHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhH---HHHHHHHHHHhCCCeEEcCCCCCCcchhhhh
Q 020805 85 LAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKG---AVQKAEEILAKTPNAYMLQQFENPANPKIHY 161 (321)
Q Consensus 85 lA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~---~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~ 161 (321)
+|++|+++|++|+||||+.++..|+++++.|||+|+.++...++++ ..+.+++++++.++.|+++||+|+.|++.||
T Consensus 176 lA~aaa~~Gi~~~IvmP~~~s~~k~~~l~~~GAeVv~v~~~~~~d~~~~~~~~a~~la~~~~~~~~i~q~~n~~n~~ag~ 255 (435)
T 1jbq_A 176 LALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHY 255 (435)
T ss_dssp HHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHHHHHSTTEECCCTTTCTHHHHHHH
T ss_pred HHHHHHHcCCeEEEEeCCCCCHHHHHHHHhCCCEEEEecCCCCcchHHHHHHHHHHHHHhcCCeEEeCccCCcccHHHHH
Confidence 9999999999999999999999999999999999999986433443 4577888888876788999999998888999
Q ss_pred hchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEecCCCCccC-----CCCCCCcccccccCCCCcc
Q 020805 162 ETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTESPVLS-----GGKPGPHKIQGIGAGFVPG 236 (321)
Q Consensus 162 ~~~~~Ei~~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~~~-----~g~~~~~~~~gl~~~~~~~ 236 (321)
.+++.||++|+++++|+||+|+|+|||++|++.++|+..|+++||+|||++++.+. .+....+.++|++.+..|.
T Consensus 256 ~t~a~EI~eQl~~~~D~vVvpvGtGGtlaGi~~~lk~~~p~vrVigVep~gs~~~~~~~l~~~~~~~~~~~gig~~~~~~ 335 (435)
T 1jbq_A 256 DTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGSILAEPEELNQTEQTTYEVEGIGYDFIPT 335 (435)
T ss_dssp HTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTCSCSSSGGGGCCSCCCCSCCSCCCSSCCT
T ss_pred HHHHHHHHHHcCCCCCEEEEecCCcHhHHHHHHHHHHhCCCCEEEEEecCCchhhchhhhhcCCCcceeecccccCccch
Confidence 99999999999767999999999999999999999999999999999999996542 1233345577888776676
Q ss_pred cccccccCEEEEeCHHHHHHHHHHHHHhcCCeEecchHHHHHHHHHHHhcCCCCCCEEEEEecCC------CCCCHHHHH
Q 020805 237 VLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVVCSQFA------CITSDSWLI 310 (321)
Q Consensus 237 ~~~~~~~d~~~~V~d~e~~~a~~~l~~~~Gi~~~pss~~a~aa~~~~~~~~~~~~~~vv~i~tgg------~~~~~~~~~ 310 (321)
.++...+|+++.|+|+|+++++++|++++|+++||+||++++++++++++. .++++||+|+||+ .+.+++|+.
T Consensus 336 ~l~~~~vd~~~~Vsd~ea~~a~r~La~~eGilve~ssgaalaaa~~~~~~~-~~g~~VV~iltd~g~ky~~~~~~~~w~~ 414 (435)
T 1jbq_A 336 VLDRTVVDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVKAAQEL-QEGQRCVVILPDSVRNYMTKFLSDRWML 414 (435)
T ss_dssp TCCGGGCCEEEEECHHHHHHHHHHHHHHSCCCBCHHHHHHHHHHHHHGGGC-CTTCEEEEEECBBGGGGTTTTTCHHHHH
T ss_pred hhhhhhccceEEeCHHHHHHHHHHHHHHcCCEEcHHHHHHHHHHHHHHHHc-CCCCeEEEEEcCCcccccchhhccHHHH
Confidence 677788999999999999999999999999999999999999999988763 4688999999994 466788988
Q ss_pred hhcCC
Q 020805 311 AITCM 315 (321)
Q Consensus 311 ~~~~~ 315 (321)
+....
T Consensus 415 ~~~~~ 419 (435)
T 1jbq_A 415 QKGFL 419 (435)
T ss_dssp HTTCC
T ss_pred hcCCC
Confidence 76543
No 14
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=100.00 E-value=1.1e-62 Score=456.76 Aligned_cols=299 Identities=19% Similarity=0.254 Sum_probs=256.3
Q ss_pred hhhhhhhhccCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHH
Q 020805 8 IAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAF 87 (321)
Q Consensus 8 ~~~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~AlA~ 87 (321)
++++|...+++|||+++++|++.+|.+||+|+|++|||||||||++.+++.++.++|...+ .++||++|+||||+|+|+
T Consensus 15 a~~~i~~~i~~TPL~~~~~l~~~~g~~i~~K~E~~~ptGSfK~Rga~~~i~~a~~~g~~~~-~~~vv~~SsGNhg~a~A~ 93 (346)
T 3l6b_A 15 AHINIRDSIHLTPVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVRSLVPDALERK-PKAVVTHSSGNHGQALTY 93 (346)
T ss_dssp HHHHHGGGSCCCCEECCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHHHHTTC-----CC-CSCEEEECSSHHHHHHHH
T ss_pred HHHHHhcccCCCCeEEchhhHHHhCCeEEEEeCCCCCCCCcHHHHHHHHHHHHHHhccccC-CCEEEEeCCCHHHHHHHH
Confidence 5678999999999999999998888999999999999999999999999999988754332 256999999999999999
Q ss_pred HHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhchHHH
Q 020805 88 MAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPE 167 (321)
Q Consensus 88 aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~E 167 (321)
+|+++|++|+||||++++..|+++++.+||+|+.+++ +++++.+.+++++++. +++|++|++||.+ +.||.|++.|
T Consensus 94 aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~v~~--~~~~~~~~a~~l~~~~-~~~~i~~~~np~~-~~g~~t~~~E 169 (346)
T 3l6b_A 94 AAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCEP--SDESRENVAKRVTEET-EGIMVHPNQEPAV-IAGQGTIALE 169 (346)
T ss_dssp HHHHTTCCEEEEEETTSCHHHHHHHHHTTCEEEEECS--SHHHHHHHHHHHHHHH-TCEECCSSSCHHH-HHHHHHHHHH
T ss_pred HHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECC--CHHHHHHHHHHHHHhc-CCEEECCCCChHH-HHHHHHHHHH
Confidence 9999999999999999999999999999999999986 4688999999998887 7899999999987 7899999999
Q ss_pred HHhhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEecCCCCccC----CCCCC------CcccccccCCC--Cc
Q 020805 168 LWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTESPVLS----GGKPG------PHKIQGIGAGF--VP 235 (321)
Q Consensus 168 i~~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~~~----~g~~~------~~~~~gl~~~~--~~ 235 (321)
|++|+ +.+|+||+|+|+|||++|++.++|+.+|+++||+|||++++.+. .|++. .+..+|+.... ..
T Consensus 170 i~~q~-~~~d~vvv~vG~GG~~aGi~~~~k~~~p~~~vigVe~~~~~~~~~s~~~g~~~~~~~~~~tia~gl~~~~g~~~ 248 (346)
T 3l6b_A 170 VLNQV-PLVDALVVPVGGGGMLAGIAITVKALKPSVKVYAAEPSNADDCYQSKLKGKLMPNLYPPETIADGVKSSIGLNT 248 (346)
T ss_dssp HHHHS-TTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGGCHHHHHHHHTSCCCCSSCCCCSCGGGCSCCCTTH
T ss_pred HHHhC-CCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEecCCCHHHHHHHHcCCccccCCCCCchhhhccCCCcHHH
Confidence 99999 57999999999999999999999999999999999999987532 23321 23445665221 23
Q ss_pred ccccccccCEEEEeCHHHHHHHHHHHHHhcCCeEecchHHHHHHHHHHHhcCC-CCCCEEEEEecCCCCCCHHHHHhh
Q 020805 236 GVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPE-NAGKLIVVCSQFACITSDSWLIAI 312 (321)
Q Consensus 236 ~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~Gi~~~pss~~a~aa~~~~~~~~~-~~~~~vv~i~tgg~~~~~~~~~~~ 312 (321)
+.+.++++|+++.|+|+|+++++++|++++|+++||+||++++++++...+.. .++++||+|+||||+|.+.++++.
T Consensus 249 ~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~~~~~~~~~Vv~i~sGG~~d~~~~~~~~ 326 (346)
T 3l6b_A 249 WPIIRDLVDDIFTVTEDEIKCATQLVWERMKLLIEPTAGVGVAAVLSQHFQTVSPEVKNICIVLSGGNVDLTSSITWV 326 (346)
T ss_dssp HHHHHHHCCEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHSGGGGGSCTTCCEEEEEECBCCCCTTGGGTTC
T ss_pred HHHHHHcCCeEEEECHHHHHHHHHHHHHHCCcEEcHHHHHHHHHHHHhhhhhccCCCCeEEEEcCCCCCCHHHHHHHH
Confidence 34556789999999999999999999999999999999999999987553322 468999999999999999844433
No 15
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=100.00 E-value=1.8e-60 Score=465.45 Aligned_cols=306 Identities=38% Similarity=0.612 Sum_probs=274.4
Q ss_pred cchhhhhhhhccCCcceecccccCCCC--ceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHH
Q 020805 6 SNIAKDVTELIGNTPLVYLNNIVNGCV--ARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGI 83 (321)
Q Consensus 6 ~~~~~~i~~~~~~TPL~~~~~l~~~~g--~~v~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~ 83 (321)
.+++++|.+.+++|||+++++|++.+| ++||+|+|++|||||||+|++.+++.++.++|.+.|| .+||++|+||||+
T Consensus 48 ~~~~~~i~~~ig~TPl~~l~~l~~~~g~~~~i~~K~E~~~ptGS~K~R~a~~~i~~a~~~g~~~~g-~~vv~~ssGN~g~ 126 (527)
T 3pc3_A 48 QQITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAEEQGLLKPG-YTIIEPTSGNTGI 126 (527)
T ss_dssp CSSCSSGGGGSSCCCEEECCSHHHHTTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHHTCCCTT-CEEEEECSSHHHH
T ss_pred hhHHhhHHhhcCCCCcEEcchhhhhcCCCcEEEEEeccCCCCCCHHHHHHHHHHHHHHHcCCCCCC-CEEEEeCCCHHHH
Confidence 457788999999999999999987766 7999999999999999999999999999999998887 6799999999999
Q ss_pred HHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChh---HHHHHHHHHHHhCCCeEEcCCCCCCcchhhh
Q 020805 84 GLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMK---GAVQKAEEILAKTPNAYMLQQFENPANPKIH 160 (321)
Q Consensus 84 AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g 160 (321)
|+|++|+++|++|+||||++++..|+++++.|||+|+.++...+++ .+.+.+++++++.++.+|++||+||.|++.|
T Consensus 127 a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~n~~~g 206 (527)
T 3pc3_A 127 GLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTPTEAAYDSPEGLIYVAQQLQRETPNSIVLDQYRNAGNPLAH 206 (527)
T ss_dssp HHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECTTSCTTSTTSHHHHHHHHHHHSSSEECCCTTTCTHHHHHH
T ss_pred HHHHHHHHhCCeEEEEEcCCCCHHHHHHHHHCCCEEEEeCCCCCcccHHHHHHHHHHHHHhCCCcEecCCCCCcchHHHH
Confidence 9999999999999999999999999999999999999998643443 3677888998887778889999999888999
Q ss_pred hhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEecCCCCccC-----CCCCCCcccccccCCCCc
Q 020805 161 YETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTESPVLS-----GGKPGPHKIQGIGAGFVP 235 (321)
Q Consensus 161 ~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~~~-----~g~~~~~~~~gl~~~~~~ 235 (321)
|.+++.||++|+++.+|+||+|+|+||+++|++.++|..+|+++||||||++++.+. .+...++.++|++.+..|
T Consensus 207 ~~t~~~Ei~~q~~~~~d~vv~~vG~GG~~~G~~~~~k~~~p~~~vigve~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~p 286 (527)
T 3pc3_A 207 YDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIKEQVPSCQIVGVDPYGSILARPAELNKTDVQFYEVEGIGYDFPP 286 (527)
T ss_dssp HHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEETTCCCSSSGGGGCCSCCCCSCCSCCCSSCC
T ss_pred HHHHHHHHHHhcCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEecCCcccccchhhcCCCCCceeccccCCCCCC
Confidence 999999999999778999999999999999999999999999999999999997543 223344567899988888
Q ss_pred ccccccccCEEEEeCHHHHHHHHHHHHHhcCCeEecchHHHHHHHHHHHhcCCCCCCEEEEEecCC------CCCCHHHH
Q 020805 236 GVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVVCSQFA------CITSDSWL 309 (321)
Q Consensus 236 ~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~Gi~~~pss~~a~aa~~~~~~~~~~~~~~vv~i~tgg------~~~~~~~~ 309 (321)
..++++.+|+++.|+|+|+++++++|++.+|+++||+||+++++++++++.. .++++||+|+|+. .+++++|+
T Consensus 287 ~~~~~~~~d~~~~V~d~e~~~a~r~l~~~eGi~~~pssa~alaaal~~~~~~-~~~~~vv~i~~d~g~ryls~~~~~~~l 365 (527)
T 3pc3_A 287 TVFDDTVVDVWTKIGDSDCFPMSRRLNAEEGLLCGGSSGGAMHAALEHARKL-KKGQRCVVILPDGIRNYMTKFVSDNWM 365 (527)
T ss_dssp TTCCGGGCCEEEEECGGGTHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHTTC-CTTCEEEEEECBBGGGGTTTTTSHHHH
T ss_pred cccchhhCcEEEEECHHHHHHHHHHHHHHcCceEcHHHHHHHHHHHHHHHHc-CCCCeEEEEEcCcchhhHhhhhcHHHH
Confidence 8888999999999999999999999999999999999999999999988753 4789999999983 45678887
Q ss_pred Hhhc
Q 020805 310 IAIT 313 (321)
Q Consensus 310 ~~~~ 313 (321)
....
T Consensus 366 ~~rg 369 (527)
T 3pc3_A 366 EARN 369 (527)
T ss_dssp HHTT
T ss_pred HhcC
Confidence 6644
No 16
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, threonine DEH L-threonine metabolism; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=100.00 E-value=1.4e-62 Score=455.76 Aligned_cols=296 Identities=19% Similarity=0.221 Sum_probs=260.4
Q ss_pred hhhhhhhhccCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHH-cCCCCCCCeEEEeeCCChHHHHHH
Q 020805 8 IAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEA-KGLITPGESVLIEPTSGNTGIGLA 86 (321)
Q Consensus 8 ~~~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGS~K~R~a~~~l~~a~~-~g~~~~g~~~vv~~SsGN~g~AlA 86 (321)
.+++|.+.+++|||+++++|++..|++||+|+|++|||||||||++.+++.++.+ .+. ++||++|+||||+|+|
T Consensus 30 a~~~i~~~i~~TPL~~l~~l~~~~g~~i~~K~E~~~ptGSfKdR~a~~~i~~a~~~~~~-----~~vv~~ssGN~g~alA 104 (342)
T 2gn0_A 30 AKKRLAGKIYKTGMPRSNYFSERCKGEIFLKFENMQRTGSFKIRGAFNKLSSLTEAEKR-----KGVVACSAGNHAQGVS 104 (342)
T ss_dssp HHHHHTTTSCCCCCCBCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHHHHHSCHHHHH-----TCEEEECSSHHHHHHH
T ss_pred HHHHHhhhcCCCCceEchhhHHHhCCEEEEEEccCCCcCChHHHHHHHHHHHHHHhcCC-----CEEEEECCChHHHHHH
Confidence 5678999999999999999998778899999999999999999999999998763 332 5699999999999999
Q ss_pred HHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhchHH
Q 020805 87 FMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGP 166 (321)
Q Consensus 87 ~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 166 (321)
++|+++|++|+||||++++..|+++++.+||+|+.+++ +++++.+.+++++++. +++|++||+||.+ +.||.|++.
T Consensus 105 ~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~--~~~~~~~~a~~l~~~~-~~~~~~~~~n~~~-~~g~~t~~~ 180 (342)
T 2gn0_A 105 LSCAMLGIDGKVVMPKGAPKSKVAATCDYSAEVVLHGD--NFNDTIAKVSEIVETE-GRIFIPPYDDPKV-IAGQGTIGL 180 (342)
T ss_dssp HHHHHHTCCEEEEECTTSCHHHHHHHHHHSCEEEECCS--SHHHHHHHHHHHHHHH-CCEECCSSSSHHH-HHHHHHHHH
T ss_pred HHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHhc-CCEEeCCCCCHHH-HHHHHHHHH
Confidence 99999999999999999999999999999999999986 4788999999998876 7899999999887 789999999
Q ss_pred HHHhhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEecCCCCccC----CCCC-----CCcccccccCCC---C
Q 020805 167 ELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTESPVLS----GGKP-----GPHKIQGIGAGF---V 234 (321)
Q Consensus 167 Ei~~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~~~----~g~~-----~~~~~~gl~~~~---~ 234 (321)
||++|++ .+|+||+|+|+|||++|++.++|+.+|.++||+|||++++.+. .|+. ..+.++|++.+. .
T Consensus 181 Ei~~q~~-~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~~~~~~s~~~g~~~~~~~~~t~a~gl~~~~~~~~ 259 (342)
T 2gn0_A 181 EIMEDLY-DVDNVIVPIGGGGLIAGIAIAIKSINPTIKVIGVQAENVHGMAASYYTGEITTHRTTGTLADGCDVSRPGNL 259 (342)
T ss_dssp HHHHHCT-TCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEETTBCHHHHHHHHTSCCCCCSSCCSCGGGCCSSCCHH
T ss_pred HHHHHcC-CCCEEEEecCCchHHHHHHHHHHHhCCCCeEEEEEeCCChhHHHHHHcCCccccCCCCccccccCCCCccHH
Confidence 9999995 7999999999999999999999999999999999999987653 2332 234567887542 2
Q ss_pred cccccccccCEEEEeCHHHHHHHHHHHHHhcCCeEecchHHHHHHHHHHHhcCCCCCCEEEEEecCCCCCCHHHHHhhc
Q 020805 235 PGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVVCSQFACITSDSWLIAIT 313 (321)
Q Consensus 235 ~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~Gi~~~pss~~a~aa~~~~~~~~~~~~~~vv~i~tgg~~~~~~~~~~~~ 313 (321)
++.+.++.+|+++.|+|+|+++++++|++++|+++||+||+++++++++.+.+..++++||+|+|||+++++.+.+..+
T Consensus 260 ~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~~~~~~~~Vv~i~tGg~~d~~~~~~~~~ 338 (342)
T 2gn0_A 260 TYEIVRELVDDIVLVSEDEIRNSMIALIQRNKVITEGAGALACAALLSGKLDSHIQNRKTVSIISGGNIDLSRVSQITG 338 (342)
T ss_dssp HHHHHHHHCCEEEEECHHHHHHHHHHHHHHHCBCCCTGGGHHHHHHHHTTTHHHHTTSEEEEEECBCCCCHHHHHHHHC
T ss_pred HHHHHHHcCCEEEEECHHHHHHHHHHHHHHcCeEEcHHHHHHHHHHHHhhhhccCCCCEEEEEECCCCCCHHHHHHHHH
Confidence 4456678899999999999999999999999999999999999999887542113689999999999999998876554
No 17
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=100.00 E-value=2.6e-60 Score=443.48 Aligned_cols=295 Identities=18% Similarity=0.132 Sum_probs=255.8
Q ss_pred hhhhhccCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHH
Q 020805 11 DVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAA 90 (321)
Q Consensus 11 ~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~AlA~aa~ 90 (321)
+....+++|||+++++|++.+|++||+|+|++|||||||||++.+++.++.++|. ++||++|+||||+|+|++|+
T Consensus 39 ~~~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~Rga~~~i~~a~~~g~-----~~vv~aSsGN~g~alA~aa~ 113 (364)
T 4h27_A 39 SGEPLHVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWAKQGC-----AHFVCSSSGNAGMAAAYAAR 113 (364)
T ss_dssp --CCSSCCCCEEEEHHHHHHHTSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTC-----CEEEECCSSHHHHHHHHHHH
T ss_pred hcCCCCCcCCeEEChhhHHHhCCEEEEEeCCCCCCCCHHHHHHHHHHHHHHhcCC-----CEEEEeCCChHHHHHHHHHH
Confidence 4556789999999999998888999999999999999999999999999998876 78999999999999999999
Q ss_pred HcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhchHHHHHh
Q 020805 91 AKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK 170 (321)
Q Consensus 91 ~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Ei~~ 170 (321)
++|++|+||||++++..|+++++.+||+|+.+++ +++++.+.+++++++.++++|++||+||.+ +.||.+++.||++
T Consensus 114 ~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~--~~~~a~~~a~~l~~~~~~~~~~~~~~np~~-~~G~~t~~~Ei~~ 190 (364)
T 4h27_A 114 QLGVPATIVVPGTTPALTIERLKNEGATVKVVGE--LLDEAFELAKALAKNNPGWVYIPPFDDPLI-WEGHASIVKELKE 190 (364)
T ss_dssp HHTCCEEEEEETTSCHHHHHHHHTTTCEEEEECS--STTHHHHHHHHHHHHSTTEEEECSSCSHHH-HHHHTHHHHHHHH
T ss_pred HhCCceEEEECCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHhCCCeEEeCCCCCHHH-HHHHHHHHHHHHH
Confidence 9999999999999999999999999999999986 468899999999988768999999999988 7899999999999
Q ss_pred hhCCCCCEEEEecCCchhHHHHHHHHHhcC-CCcEEEEEecCCCCccC----CCCC-----CCcccccccCCCCc---cc
Q 020805 171 GSGGRIDALVSGIGTGGTITGAGKFLKEKN-PNIKLYGIEPTESPVLS----GGKP-----GPHKIQGIGAGFVP---GV 237 (321)
Q Consensus 171 ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~-~~~~vigv~~~~~~~~~----~g~~-----~~~~~~gl~~~~~~---~~ 237 (321)
|+++.||+||+|+|+|||++|++.++|+.+ |+++||+|||++++.+. .+++ ..+.+++|+.+..+ +.
T Consensus 191 q~~~~~D~vvvpvG~GG~~aGi~~~~k~~~~p~~~vigVe~~~~~~~~~~~~~g~~~~~~~~~tia~gl~~~~~~~~~~~ 270 (364)
T 4h27_A 191 TLWEKPGAIALSVGGGGLLCGVVQGLQEVGWGDVPVIAMETFGAHSFHAATTAGKLVSLPKITSVAKALGVKTVGAQALK 270 (364)
T ss_dssp HCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEETTSCHHHHHHHHTSCCCCSCCCCSCGGGCCSSCCHHHHH
T ss_pred HhCCCCCEEEEcCCccHHHHHHHHHHHHhCCCCCeEEEEecCCChHHHHHHHCCCcccCCCCCcHHHHhCCCCCcHHHHH
Confidence 997679999999999999999999999886 88999999999998653 2332 22345677665432 23
Q ss_pred ccccccCEEEEeCHHHHHHHHHHHHHhcCCeEecchHHHHHHHH-----HHHhcCCC--CCCEEEEEecCCC-CCCHHHH
Q 020805 238 LEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAI-----EIAKRPEN--AGKLIVVCSQFAC-ITSDSWL 309 (321)
Q Consensus 238 ~~~~~~d~~~~V~d~e~~~a~~~l~~~~Gi~~~pss~~a~aa~~-----~~~~~~~~--~~~~vv~i~tgg~-~~~~~~~ 309 (321)
+.++..+..+.|+|+|+++++++|++++|+++||+||+++++++ ++.+++.. ++++||+|+|||| ++.+.+.
T Consensus 271 ~~~~~~~~~~~V~d~e~~~a~~~l~~~egi~~eps~aaalaa~~~~k~~~l~~~g~~~~~~~~Vv~v~tGG~~~d~~~l~ 350 (364)
T 4h27_A 271 LFQEHPIFSEVISDQEAVAAIEKFVDDEKILVEPACGAALAAVYSHVIQKLQLEGNLRTPLPSLVVIVCGGSNISLAQLR 350 (364)
T ss_dssp HHTTSCEEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTHHHHHHHTTSSCSSCCEEEEEECBCSSCCHHHHH
T ss_pred HHHhcCCEEEEECHHHHHHHHHHHHHHCCCeEcccHHHHHHHHHhhhhHHhhhccCcCCCCCeEEEEECCCCCCCHHHHH
Confidence 34566778889999999999999999999999999999999985 55555543 3689999999997 8887765
Q ss_pred Hhhc
Q 020805 310 IAIT 313 (321)
Q Consensus 310 ~~~~ 313 (321)
+..+
T Consensus 351 ~~~~ 354 (364)
T 4h27_A 351 ALKE 354 (364)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 18
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=100.00 E-value=3.2e-61 Score=443.63 Aligned_cols=293 Identities=19% Similarity=0.259 Sum_probs=256.1
Q ss_pred hhhhhhhhccCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHH-cCCCCCCCeEEEeeCCChHHHHHH
Q 020805 8 IAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEA-KGLITPGESVLIEPTSGNTGIGLA 86 (321)
Q Consensus 8 ~~~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGS~K~R~a~~~l~~a~~-~g~~~~g~~~vv~~SsGN~g~AlA 86 (321)
.+++|...+++|||+++++|++..|.+||+|+|++|||||||||++.+++.++.+ ++. ++||++|+||||+|+|
T Consensus 16 a~~~i~~~i~~TPL~~~~~l~~~~g~~i~~K~E~~~ptGS~KdRga~~~i~~~~~~~~~-----~~vv~~ssGN~g~alA 90 (323)
T 1v71_A 16 ASERIKKFANKTPVLTSSTVNKEFVAEVFFKCENFQKMGAFKFRGALNALSQLNEAQRK-----AGVLTFSSGNHAQAIA 90 (323)
T ss_dssp HHHHHTTTSCCCCEECCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHHHTTCCHHHHH-----HCEEECCSSHHHHHHH
T ss_pred HHHHHhccCCCCCceEhHhhHHHhCCeEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCC-----CeEEEeCCCcHHHHHH
Confidence 5668889999999999999988778899999999999999999999999986543 222 6799999999999999
Q ss_pred HHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhchHH
Q 020805 87 FMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGP 166 (321)
Q Consensus 87 ~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 166 (321)
++|+++|++|+||||++++..|+++++.+||+|+.++++ ++++.+.+++++++. +++|++||+||.+ +.||.|++.
T Consensus 91 ~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~a~~l~~~~-~~~~i~~~~n~~~-~~g~~t~~~ 166 (323)
T 1v71_A 91 LSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMYDRY--KDDREKMAKEISERE-GLTIIPPYDHPHV-LAGQGTAAK 166 (323)
T ss_dssp HHHHHTTCCEEEEEETTCCHHHHHHHHHTTCEEEEECTT--TTCHHHHHHHHHHHH-TCBCCCSSSSHHH-HHHHTHHHH
T ss_pred HHHHHcCCCEEEECCCCCcHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CCEecCCCCCcch-hhhHhHHHH
Confidence 999999999999999999999999999999999999974 467888888988876 6788999999987 689999999
Q ss_pred HHHhhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEecCCCCccC----CCCC-----CCcccccccCCCC---
Q 020805 167 ELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTESPVLS----GGKP-----GPHKIQGIGAGFV--- 234 (321)
Q Consensus 167 Ei~~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~~~----~g~~-----~~~~~~gl~~~~~--- 234 (321)
||++|++ .+|+||+|+|+|||++|+++++|+.+|+++||+|+|++++.+. .|+. ..+.++|++.+..
T Consensus 167 Ei~~q~~-~~d~vv~~vG~GGt~~Gi~~~~k~~~~~~~vigve~~~~~~~~~~~~~g~~~~~~~~~t~a~gl~~~~~~~~ 245 (323)
T 1v71_A 167 ELFEEVG-PLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVEPEAGNDGQQSFRKGSIVHIDTPKTIADGAQTQHLGNY 245 (323)
T ss_dssp HHHHHHC-CCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCHHHHHHHHTSCCCCCCCCCSCTTSCCSSCCHH
T ss_pred HHHHhcC-CCCEEEEecCCcHHHHHHHHHHHHcCCCCEEEEEEeCCCchHHHHHHcCCceecCCCCcccccccCCCCcHH
Confidence 9999995 7999999999999999999999999999999999999987543 2332 1345677765432
Q ss_pred cccccccccCEEEEeCHHHHHHHHHHHHHhcCCeEecchHHHHHHHHHHHhcCCCCCCEEEEEecCCCCCCHHHHHhh
Q 020805 235 PGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVVCSQFACITSDSWLIAI 312 (321)
Q Consensus 235 ~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~Gi~~~pss~~a~aa~~~~~~~~~~~~~~vv~i~tgg~~~~~~~~~~~ 312 (321)
++.+.++++|+++.|+|+|+++++++|++++|+++||++|+++++++++.++ .++++||+|+|||+++++.+.+..
T Consensus 246 ~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~eps~a~alaa~~~~~~~--~~~~~vv~i~tGg~~~~~~~~~~~ 321 (323)
T 1v71_A 246 TFSIIKEKVDDILTVSDEELIDCLKFYAARMKIVVEPTGCLSFAAARAMKEK--LKNKRIGIIISGGNVDIERYAHFL 321 (323)
T ss_dssp HHHHHHHHCCEEEEECHHHHHHHHHHHHHHTCCCCCGGGGHHHHHHHHTGGG--GTTCEEEEEECBCCCCHHHHHHHH
T ss_pred HHHHHHHhCCEEEEECHHHHHHHHHHHHHhcCeEEcHHHHHHHHHHHHhHHh--cCCCeEEEEeCCCCCCHHHHHHHH
Confidence 2345567899999999999999999999999999999999999999988664 378999999999999998886643
No 19
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=100.00 E-value=2.9e-61 Score=441.82 Aligned_cols=286 Identities=21% Similarity=0.244 Sum_probs=250.9
Q ss_pred chhhhhhhhccCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHH
Q 020805 7 NIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLA 86 (321)
Q Consensus 7 ~~~~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~AlA 86 (321)
.+++++.+.+++|||+++++|++..|.+||+|+|++|||||||||++.+++.++. +. .+||++|+||||+|+|
T Consensus 9 ~a~~~i~~~~~~TPL~~~~~l~~~~g~~i~~K~E~~~ptgSfKdR~a~~~i~~l~--~~-----~~vv~~ssGN~g~alA 81 (311)
T 1ve5_A 9 AAFRRIAPYTHRTPLLTSRLLDGLLGKRLLLKAEHLQKTGSFKARGALSKALALE--NP-----KGLLAVSSGNHAQGVA 81 (311)
T ss_dssp HHHHHHGGGSCCCCEEECHHHHHHTTSEEEEEEGGGSGGGBTHHHHHHHHHHHSS--SC-----CCEEEECSSHHHHHHH
T ss_pred HHHHHHhccCCCCCceechhhHHhhCCeEEEEecCCCCcCCcHHHHHHHHHHHhc--CC-----CeEEEECCCcHHHHHH
Confidence 3567899999999999999998878889999999999999999999999999876 22 5699999999999999
Q ss_pred HHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhchHH
Q 020805 87 FMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGP 166 (321)
Q Consensus 87 ~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 166 (321)
++|+++|++|+||||++++..|+++++.+||+|+.++++ ++++.+.+++++++. +++|++||+||.+ +.||.+++.
T Consensus 82 ~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~a~~~~~~~-~~~~~~~~~n~~~-~~g~~t~~~ 157 (311)
T 1ve5_A 82 YAAQVLGVKALVVMPEDASPYKKACARAYGAEVVDRGVT--AKNREEVARALQEET-GYALIHPFDDPLV-IAGQGTAGL 157 (311)
T ss_dssp HHHHHHTCCEEEECCCC--CCHHHHHHHTTCEEECTTCC--TTTHHHHHHHHHHHH-CCEECCSSSSHHH-HHHHHHHHH
T ss_pred HHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CcEecCCCCCcch-hhhccHHHH
Confidence 999999999999999999999999999999999998864 678888999988876 7899999999987 689999999
Q ss_pred HHHhhhC---CCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEecCCCCccC----CCCC------CCcccccccCCC
Q 020805 167 ELWKGSG---GRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTESPVLS----GGKP------GPHKIQGIGAGF 233 (321)
Q Consensus 167 Ei~~ql~---~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~~~----~g~~------~~~~~~gl~~~~ 233 (321)
||++|++ +.+|+||+|+|+||+++|++.++|+.+|.++||+|+|++++.+. .|+. ..+.++|+..+.
T Consensus 158 Ei~~q~~~~~~~~d~vvvpvG~Gg~~~Gi~~~~k~~~~~~~vigve~~~~~~~~~~~~~g~~~~~~~~~~~i~~gl~~~~ 237 (311)
T 1ve5_A 158 ELLAQAGRMGVFPGAVLAPVGGGGLLAGLATAVKALSPTTLVLGVEPEAADDAKRSLEAGRILRLEAPPRTRADGVRTLS 237 (311)
T ss_dssp HHHHHHHHHTCCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGGCHHHHHHHHTSCCCCSSCCCCSCGGGCCSS
T ss_pred HHHHHHHhcCCCCCEEEEccCchHHHHHHHHHHHHhCCCCEEEEEEeCCChHHHHHHHcCCccccCCCCCeeeCcCCCCC
Confidence 9999995 67999999999999999999999999999999999999987542 2332 233456666432
Q ss_pred ---CcccccccccCEEEEeCHHHHHHHHHHHHHhcCCeEecchHHHHHHHHHHHhcCCCCCCEEEEEecCCCCCCH
Q 020805 234 ---VPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVVCSQFACITSD 306 (321)
Q Consensus 234 ---~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~Gi~~~pss~~a~aa~~~~~~~~~~~~~~vv~i~tgg~~~~~ 306 (321)
.++.+.++++|+++.|+|+|+++++++|++++|+++||+||+++++++++.++ . +++||+|+||||+|++
T Consensus 238 ~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~--~-~~~vv~i~tgg~~d~~ 310 (311)
T 1ve5_A 238 LGERTFPILRERVDGILTVSEEALLEAERLLFTRTKQVVEPTGALPLAAVLEHGAR--L-PQTLALLLSGGNRDFS 310 (311)
T ss_dssp CCTTTHHHHHHHCCEEEEECHHHHHHHHHHHHHHTCBCCCGGGGHHHHHHHHHGGG--S-CSEEEEEECBCCCCCC
T ss_pred ccHHHHHHHHhcCCEEEEECHHHHHHHHHHHHHhcCceEchHHHHHHHHHHhhhhc--c-CCEEEEEECCCCCCCC
Confidence 23345667899999999999999999999999999999999999999998776 4 8999999999999875
No 20
>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum}
Probab=100.00 E-value=6.1e-61 Score=448.45 Aligned_cols=296 Identities=22% Similarity=0.246 Sum_probs=260.8
Q ss_pred hhhhhhccCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHH
Q 020805 10 KDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMA 89 (321)
Q Consensus 10 ~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~AlA~aa 89 (321)
.+|...+++|||+++++|++.+|.+||+|+|++|||||||||++.+++.++.+++. ..+|+++|+||||+|+|++|
T Consensus 52 ~~i~~~i~~TPL~~l~~l~~~~g~~i~~K~E~~~ptgSfKdRga~~~i~~l~~~~~----~~~vv~assGN~g~a~A~aa 127 (366)
T 3iau_A 52 SPVYDVAIESPLELAEKLSDRLGVNFYIKREDKQRVFSFKLRGAYNMMSNLSREEL----DKGVITASAGNHAQGVALAG 127 (366)
T ss_dssp CCGGGTCCCCCEEECHHHHHHHTSEEEEEEGGGSTTSBTTHHHHHHHHHTSCHHHH----HHCEEEECSSHHHHHHHHHH
T ss_pred HHHhhhcCCCCcEEhhhhhHhhCCEEEEEecCCCCCcchHHHHHHHHHHHHHHhCC----CCEEEEeCCCHHHHHHHHHH
Confidence 36778899999999999998888999999999999999999999999987643221 25699999999999999999
Q ss_pred HHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhchHHHHH
Q 020805 90 AAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELW 169 (321)
Q Consensus 90 ~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Ei~ 169 (321)
+++|++|+||||++++..|+++++.+||+|+.+++ +++++.+.+++++++. +++|++||+|+.+ +.||.+++.||+
T Consensus 128 ~~~G~~~~iv~P~~~~~~k~~~~~~~GA~V~~v~~--~~~~~~~~a~~~~~~~-~~~~i~~~~n~~~-i~g~~t~~~Ei~ 203 (366)
T 3iau_A 128 QRLNCVAKIVMPTTTPQIKIDAVRALGGDVVLYGK--TFDEAQTHALELSEKD-GLKYIPPFDDPGV-IKGQGTIGTEIN 203 (366)
T ss_dssp HHTTCCEEEEECTTCCHHHHHHHHHTTCEEEECCS--SHHHHHHHHHHHHHHH-TCEECCSSSSHHH-HHHHHHHHHHHH
T ss_pred HHhCCceEEEeCCCCCHHHHHHHHHCCCeEEEECc--CHHHHHHHHHHHHHhc-CCEecCCCCChHH-HHHHHHHHHHHH
Confidence 99999999999999999999999999999999985 5889999999998886 8899999999988 699999999999
Q ss_pred hhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEecCCCCccC----CCCCC-----CcccccccCCCC---ccc
Q 020805 170 KGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTESPVLS----GGKPG-----PHKIQGIGAGFV---PGV 237 (321)
Q Consensus 170 ~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~~~----~g~~~-----~~~~~gl~~~~~---~~~ 237 (321)
+|+ +.+|+||+|+|+||+++|++.++|..+|.+++++|+|.+++.+. .|+.. .+..+|++.+.. ++.
T Consensus 204 ~q~-~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigVe~~~~~~l~~~~~~g~~~~~~~~~tia~gl~~~~~~~~~~~ 282 (366)
T 3iau_A 204 RQL-KDIHAVFIPVGGGGLIAGVATFFKQIAPNTKIIGVEPYGAASMTLSLHEGHRVKLSNVDTFADGVAVALVGEYTFA 282 (366)
T ss_dssp HHC-CSEEEEEEECSSSHHHHHHHHHHHHHSTTSEEEEEEEGGGCHHHHHHHHTSCCEESCCCCSSGGGCCSSCCHHHHH
T ss_pred Hhc-CCCCEEEEccCchHHHHHHHHHHHHhCCCCeEEEEeecCChHHHHHHHcCCCCcCCCccchhhhhcCCCCcHHHHH
Confidence 999 78999999999999999999999999999999999999997653 23321 233466665432 345
Q ss_pred ccccccCEEEEeCHHHHHHHHHHHHHhcCCeEecchHHHHHHHHHHHhcCCCCCCEEEEEecCCCCCCHHHHHhhcC
Q 020805 238 LEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVVCSQFACITSDSWLIAITC 314 (321)
Q Consensus 238 ~~~~~~d~~~~V~d~e~~~a~~~l~~~~Gi~~~pss~~a~aa~~~~~~~~~~~~~~vv~i~tgg~~~~~~~~~~~~~ 314 (321)
+.++++|+++.|+|+|+++++++|++++|+++||+||++++++++++++...++++||+|+||||++++.+.+..++
T Consensus 283 ~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~ep~sa~alaa~~~~~~~~~~~g~~Vv~i~tGgn~d~~~l~~~~~~ 359 (366)
T 3iau_A 283 KCQELIDGMVLVANDGISAAIKDVYDEGRNILETSGAVAIAGAAAYCEFYKIKNENIVAIASGANMDFSKLHKVTEL 359 (366)
T ss_dssp HHHHHCCEEEEECHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHTTCCSCEEEEEECBCCCCGGGHHHHHHH
T ss_pred HHHhcCCCceeECHHHHHHHHHHHHHHcCcEEcHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCCCCCHHHHHHHHHh
Confidence 66788999999999999999999999999999999999999999998776657899999999999999888765543
No 21
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=100.00 E-value=4.6e-60 Score=442.86 Aligned_cols=295 Identities=17% Similarity=0.133 Sum_probs=252.9
Q ss_pred hhhhhhhhccCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHH
Q 020805 8 IAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAF 87 (321)
Q Consensus 8 ~~~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~AlA~ 87 (321)
..+++...+++|||+++++|++..|++||+|+|++|||||||||++.+++.++.++|. ++||++|+||||+|+|+
T Consensus 36 ~~p~~~~~~~~TPL~~l~~l~~~~g~~i~~K~E~~~ptGSfKdRga~~~l~~a~~~g~-----~~vv~aSsGN~g~alA~ 110 (372)
T 1p5j_A 36 FMMSGEPLHVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWAKQGC-----AHFVCSSAGNAGMAAAY 110 (372)
T ss_dssp ----CCCSSCCCCEEEEHHHHHHHTSCEEEECGGGSGGGBTTHHHHHHHHHHHHHTTC-----CEEEECCSSHHHHHHHH
T ss_pred hcccccCCCCCCCceEcHhhHHHhCCEEEEEEcCCCCCCChHHHHHHHHHHHHHHcCC-----CEEEEeCCCHHHHHHHH
Confidence 3445667899999999999988778899999999999999999999999999988764 78999999999999999
Q ss_pred HHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhchHHH
Q 020805 88 MAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPE 167 (321)
Q Consensus 88 aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~E 167 (321)
+|+++|++|+||||++++..|+++++.+||+|+.+++ +++++.+.+++++++.++++|++||+||.+ +.||.|++.|
T Consensus 111 aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~--~~~~a~~~a~~l~~~~~~~~~v~~~~n~~~-~~G~~t~~~E 187 (372)
T 1p5j_A 111 AARQLGVPATIVVPGTTPALTIERLKNEGATCKVVGE--LLDEAFELAKALAKNNPGWVYIPPFDDPLI-WEGHASIVKE 187 (372)
T ss_dssp HHHHHTCCEEEEECTTCCHHHHHHHHHTTCEEEECCS--CHHHHHHHHHHHHHHSTTEEECCSSCCHHH-HHHHTHHHHH
T ss_pred HHHHcCCcEEEEECCCCCHHHHHHHHhcCCEEEEECC--CHHHHHHHHHHHHHhcCCcEEeCCCCCHHH-HhhHHHHHHH
Confidence 9999999999999999999999999999999999986 578999999999988558999999999988 6889999999
Q ss_pred HHhhhCCCCCEEEEecCCchhHHHHHHHHHhcC-CCcEEEEEecCCCCccC----CCCCC-----CcccccccCCCCc--
Q 020805 168 LWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN-PNIKLYGIEPTESPVLS----GGKPG-----PHKIQGIGAGFVP-- 235 (321)
Q Consensus 168 i~~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~-~~~~vigv~~~~~~~~~----~g~~~-----~~~~~gl~~~~~~-- 235 (321)
|++|++..||+||+|+|+||+++|++.++|+.+ |+++||+|||++++.+. .|++. .+.++||+.+.++
T Consensus 188 i~~ql~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~p~~~vigVe~~~~~~~~~~~~~g~~~~~~~~~tia~gl~~~~~~~~ 267 (372)
T 1p5j_A 188 LKETLWEKPGAIALSVGGGGLLCGVVQGLQECGWGDVPVIAMETFGAHSFHAATTAGKLVSLPKITSVAKALGVKTVGSQ 267 (372)
T ss_dssp HHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEETTSCHHHHHHHHTSCCCCSCCCCSCGGGCCSSCCHH
T ss_pred HHHHcCCCCCEEEEecCCchHHHHHHHHHHHhCCCCceEEEEecCCChHHHHHHHcCCceecCCCceeecccCCCCCCHH
Confidence 999997669999999999999999999999986 88999999999987653 23321 2345677765443
Q ss_pred -ccccccccCEEEEeCHHHHHHHHHHHHHhcCCeEecchHHHHHHHHH-----HHhcCC--CCCCEEEEEecCCC-CCCH
Q 020805 236 -GVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIE-----IAKRPE--NAGKLIVVCSQFAC-ITSD 306 (321)
Q Consensus 236 -~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~Gi~~~pss~~a~aa~~~-----~~~~~~--~~~~~vv~i~tgg~-~~~~ 306 (321)
+.+.....|+++.|+|+|+++++++|++++|+++||+||++++++++ +.+++. .++++||+|+|||+ ++.+
T Consensus 268 ~~~~~~~~~~~~~~Vsd~e~~~a~~~l~~~eGi~~epssa~alaa~~~~~~~~l~~~g~~~~~~~~Vv~i~tgg~~~~~~ 347 (372)
T 1p5j_A 268 ALKLFQEHPIFSEVISDQEAVAAIEKFVDDEKILVEPACGAALAAVYSHVIQKLQLEGNLRTPLPSLVVIVCGGSNISLA 347 (372)
T ss_dssp HHHHHHHSCEEEEEECHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHTTHHHHHHHTTSSCSSCSCEEEECCBCSSCCHH
T ss_pred HHHHHhhcCCEEEEECHHHHHHHHHHHHHHcCCeechhHHHHHHHHHHhhHHHHhhccccCCCCCeEEEEECCCCCCCHH
Confidence 22345567889999999999999999999999999999999999874 333332 36789999999997 7766
Q ss_pred HHHH
Q 020805 307 SWLI 310 (321)
Q Consensus 307 ~~~~ 310 (321)
.+.+
T Consensus 348 ~~~~ 351 (372)
T 1p5j_A 348 QLRA 351 (372)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 22
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=100.00 E-value=2.7e-60 Score=456.36 Aligned_cols=290 Identities=22% Similarity=0.253 Sum_probs=256.9
Q ss_pred hhhhhccCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHH
Q 020805 11 DVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAA 90 (321)
Q Consensus 11 ~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~AlA~aa~ 90 (321)
++...+++|||+++++|++..|++||+|+|++|||||||||++.+++.++.+++. .++||++|+||||+|+|++|+
T Consensus 24 ~i~~~i~~TPL~~l~~Ls~~~g~~V~lK~E~lqPtgSfKdRgA~n~i~~l~~~~~----~~gVV~aSsGNhg~avA~aa~ 99 (514)
T 1tdj_A 24 PVYEAAQVTPLQKMEKLSSRLDNVILVKREDRQPVHSFKLRGAYAMMAGLTEEQK----AHGVITASAGNHAQGVAFSSA 99 (514)
T ss_dssp CGGGTCCCCCEEECHHHHHHTTSEEEEECGGGSTTSSSTHHHHHHHHHTTTTSSC----SSSCEEEECSSSHHHHHHHHH
T ss_pred hHhcccCCCCcEEchhhHHhhCCeEEEEECCCCCcccHHHHHHHHHHHHHHHhcC----CCEEEEECCcHHHHHHHHHHH
Confidence 6788999999999999998888999999999999999999999999998765432 256999999999999999999
Q ss_pred HcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhchHHHHHh
Q 020805 91 AKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK 170 (321)
Q Consensus 91 ~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Ei~~ 170 (321)
++|++|+||||..++..|+++++.+||+|+.++. +++++.+.+++++++. +++|++||+||.+ ++||+|++.||++
T Consensus 100 ~lGi~~~IvmP~~~p~~Kv~~~r~~GAeVvlv~~--~~dda~~~a~ela~e~-g~~~v~pfdnp~~-iaGqgTig~EI~e 175 (514)
T 1tdj_A 100 RLGVKALIVMPTATADIKVDAVRGFGGEVLLHGA--NFDEAKAKAIELSQQQ-GFTWVPPFDHPMV-IAGQGTLALELLQ 175 (514)
T ss_dssp HTTCCEEEECCSSCCHHHHHHHHHHSCEEECCCS--SHHHHHHHHHHHHHHH-CCEECCSSCCHHH-HHHHHHHHHHHHH
T ss_pred HcCCcEEEEECCCCCHHHHHHHHHCCCEEEEECC--CHHHHHHHHHHHHHhc-CCEeeCCCCCHHH-HHHHHHHHHHHHH
Confidence 9999999999999999999999999999999885 5889999999999886 7899999999998 7999999999999
Q ss_pred hhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEecCCCCccC----CCCCC-----CcccccccCCCC---cccc
Q 020805 171 GSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTESPVLS----GGKPG-----PHKIQGIGAGFV---PGVL 238 (321)
Q Consensus 171 ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~~~----~g~~~-----~~~~~gl~~~~~---~~~~ 238 (321)
|+++ +|+||+|+|+||+++|++.++|+++|.++||||||++++.+. .|++. .+.++|++...+ ++.+
T Consensus 176 Ql~~-~D~vvvpvGgGGliaGia~~lk~~~P~~kVIgVep~~a~~l~~sl~~G~~~~l~~v~tiadGiav~~~g~~~~~l 254 (514)
T 1tdj_A 176 QDAH-LDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAEDSACLKAALDAGHPVDLPRVGLFAEGVAVKRIGDETFRL 254 (514)
T ss_dssp HCTT-CCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTTCHHHHHHHHTSCCCCSCCCSSSSTTCCSSCCCHHHHH
T ss_pred HCCC-CCEEEEccCcHHHHHHHHHHHHHhCCCCEEEEEeccCChhHHHHHhcCCeeecCCccccccchhcCCCChHHHHH
Confidence 9954 999999999999999999999999999999999999998764 23322 233456654332 3456
Q ss_pred cccccCEEEEeCHHHHHHHHHHHHHhcCCeEecchHHHHHHHHHHHhcCCCCCCEEEEEecCCCCCCHHHH
Q 020805 239 EVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVVCSQFACITSDSWL 309 (321)
Q Consensus 239 ~~~~~d~~~~V~d~e~~~a~~~l~~~~Gi~~~pss~~a~aa~~~~~~~~~~~~~~vv~i~tgg~~~~~~~~ 309 (321)
+++++|+++.|+|+|+.+++++|++++|+++||+||++++++++++++...++++||+|+||||++++.+.
T Consensus 255 ~~~~vd~~v~Vsd~ei~~ai~~L~~~~givvEPsgA~alAal~~~~~~~~~~g~~VV~I~tGgn~d~~~l~ 325 (514)
T 1tdj_A 255 CQEYLDDIITVDSDAICAAMKDLFEDVRAVAEPSGALALAGMKKYIALHNIRGERLAHILSGANVNFHGLR 325 (514)
T ss_dssp HTTSCCEEEEECHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHTCCSCEEEEECCCCCCCTTHHH
T ss_pred HHHhCCeEEEECHHHHHHHHHHHHHHcCeEEcHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCCCHHHHH
Confidence 78899999999999999999999999999999999999999999876543478999999999999987543
No 23
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.7e-59 Score=431.36 Aligned_cols=291 Identities=23% Similarity=0.167 Sum_probs=250.7
Q ss_pred hhccCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcC
Q 020805 14 ELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQ 93 (321)
Q Consensus 14 ~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G 93 (321)
..+++|||+++++|++..|.+||+|+|++|||||||||++.+++.++.++|. ++||++|+||||+|+|++|+++|
T Consensus 3 ~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptgS~K~R~a~~~l~~a~~~g~-----~~vv~~ssGN~g~alA~~a~~~G 77 (318)
T 2rkb_A 3 PFHVVTPLLESWALSQVAGMPVFLKCENVQPSGSFKIRGIGHFCQEMAKKGC-----RHLVCSSGGNAGIAAAYAARKLG 77 (318)
T ss_dssp CSSCCCCEEEEHHHHHHHTSCEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTC-----CEEEECCCSHHHHHHHHHHHHHT
T ss_pred CCCccCCceehHhhHHHhCCeEEEEecCCCCCCCHHHHHHHHHHHHHHHcCC-----CEEEEECCchHHHHHHHHHHHcC
Confidence 3578999999999988778899999999999999999999999999998774 78999999999999999999999
Q ss_pred CeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhchHHHHHhhhC
Q 020805 94 YRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSG 173 (321)
Q Consensus 94 ~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Ei~~ql~ 173 (321)
++|+||||++++..|+++++.+||+|+.+++ +++++.+.+++++++. +++|++||+||.+ +.||.+++.||++|++
T Consensus 78 ~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~~--~~~~~~~~a~~~~~~~-~~~~~~~~~n~~~-~~g~~t~~~Ei~~q~~ 153 (318)
T 2rkb_A 78 IPATIVLPESTSLQVVQRLQGEGAEVQLTGK--VWDEANLRAQELAKRD-GWENVPPFDHPLI-WKGHASLVQELKAVLR 153 (318)
T ss_dssp CCEEEEECTTCCHHHHHHHHHTTCEEEECCS--SHHHHHHHHHHHHHST-TEEECCSSCSHHH-HHHHHHHHHHHHHHSS
T ss_pred CCEEEEECCCCcHHHHHHHHhcCCEEEEECC--CHHHHHHHHHHHHHhc-CCEEeCCCCChhh-ccchhHHHHHHHHhcC
Confidence 9999999999999999999999999999986 5788999999998875 8999999999988 6889999999999997
Q ss_pred CCCCEEEEecCCchhHHHHHHHHHhcC-CCcEEEEEecCCCCccC----CCCC-----CCcccccccCCCCcc---cccc
Q 020805 174 GRIDALVSGIGTGGTITGAGKFLKEKN-PNIKLYGIEPTESPVLS----GGKP-----GPHKIQGIGAGFVPG---VLEV 240 (321)
Q Consensus 174 ~~~d~vv~p~G~Gg~~aGi~~~~k~~~-~~~~vigv~~~~~~~~~----~g~~-----~~~~~~gl~~~~~~~---~~~~ 240 (321)
..||+||+|+|+||+++|++.++|+.+ |.++||+|+|++++.+. .+++ ..+.++|++.+..+. .+.+
T Consensus 154 ~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~~~~~~~~~~~~~g~~~~~~~~~t~a~gl~~~~~~~~~~~~~~ 233 (318)
T 2rkb_A 154 TPPGALVLAVGGGGLLAGVVAGLLEVGWQHVPIIAMETHGAHCFNAAITAGKLVTLPDITSVAKSLGAKTVAARALECMQ 233 (318)
T ss_dssp SCCSEEEEECSSSHHHHHHHHHHHHHTCTTSCEEEEEETTBCHHHHHHHHTSCCBCSCCCSSCGGGCCSBCCHHHHHHHH
T ss_pred CCCCEEEEeeCCCcHHHHHHHHHHHhCCCCCEEEEEecCCChHHHHHHHcCCcccCCCCCceecccCCCCCCHHHHHHHH
Confidence 679999999999999999999999886 88999999999987552 2322 124456777654432 2334
Q ss_pred cccCEEEEeCHHHHHHHHHHHHHhcCCeEecchHHHHHHHHH-----HHhcCC--CCCCEEEEEecCCC-CCCHHHHHhh
Q 020805 241 NIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIE-----IAKRPE--NAGKLIVVCSQFAC-ITSDSWLIAI 312 (321)
Q Consensus 241 ~~~d~~~~V~d~e~~~a~~~l~~~~Gi~~~pss~~a~aa~~~-----~~~~~~--~~~~~vv~i~tgg~-~~~~~~~~~~ 312 (321)
...|+++.|+|+|+++++++|++++|+++||+||++++++++ +.+++. .++++||+|+|||+ ++.+.+.+..
T Consensus 234 ~~~~~~~~v~d~e~~~a~~~l~~~~gi~~eps~a~a~aa~~~~~~~~~~~~g~~~~~~~~vv~i~tgg~~~~~~~l~~~~ 313 (318)
T 2rkb_A 234 VCKIHSEVVEDTEAVSAVQQLLDDERMLVEPACGAALAAIYSGLLRRLQAEGCLPPSLTSVVVIVCGGNNINSRELQALK 313 (318)
T ss_dssp HSCEEEEEECHHHHHHHHHHHHHHHCBCCCHHHHHHHHHHHTSHHHHHHHTTSSCSSCSCEEEEECBCSSCCHHHHHHHH
T ss_pred HcCCEEEEECHHHHHHHHHHHHHhcCcEEchhHHHHHHHHHHhhHHHHhhccccCCCCCeEEEEECCCCCCCHHHHHHHH
Confidence 567889999999999999999999999999999999999874 223332 36789999999998 7777665443
Q ss_pred c
Q 020805 313 T 313 (321)
Q Consensus 313 ~ 313 (321)
+
T Consensus 314 ~ 314 (318)
T 2rkb_A 314 T 314 (318)
T ss_dssp H
T ss_pred H
Confidence 3
No 24
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=100.00 E-value=2.5e-60 Score=440.81 Aligned_cols=301 Identities=14% Similarity=0.115 Sum_probs=259.3
Q ss_pred chhhhhhhhccCCcceecccccCCC-C-ceEEEEeCCCC-C--CCchhhHHHHHHHHHHHHcCCCCCCCeEEEe--eCCC
Q 020805 7 NIAKDVTELIGNTPLVYLNNIVNGC-V-ARIAAKLEMME-P--CSSVKDRIGYSMISDAEAKGLITPGESVLIE--PTSG 79 (321)
Q Consensus 7 ~~~~~i~~~~~~TPL~~~~~l~~~~-g-~~v~~K~E~~~-p--tGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~--~SsG 79 (321)
+.++++.+.+++|||+++++|++.+ | .+||+|+|++| | +||||+|++.+++.++.++|. ++||+ +|+|
T Consensus 4 ~~~~~i~~~~~~TPL~~~~~l~~~~~g~~~i~~K~E~~n~p~~~Gs~K~R~a~~~l~~a~~~g~-----~~vv~~G~ssG 78 (341)
T 1f2d_A 4 AKFAKYPLTFGPSPISNLNRLSQHLGSKVNVYAKREDCNSGLAFGGNKLRKLEYIVPDIVEGDY-----THLVSIGGRQS 78 (341)
T ss_dssp TSSCCCCCSSSSCCEEECHHHHHHTTTCSEEEEEEGGGSCSSTTCCHHHHHHTTTHHHHHHSCC-----SEEEEEEETTC
T ss_pred ccCCCcccCCCCCcceeHHhHHHhhCCCceEEEEeCCCCCCCCCCchHHHHHHHHHHHHHHcCC-----CEEEEcCCcch
Confidence 3456789999999999999998877 7 89999999999 9 999999999999999999886 67999 9999
Q ss_pred hHHHHHHHHHHHcCCeEEEEecCCCC-----HH------HHHHHHHcCCEEEEeCCCCCh---hHHHHHHHHHHHhCCCe
Q 020805 80 NTGIGLAFMAAAKQYRLIITMPASMS-----LE------RRIILRAFGAELVLTDPAKGM---KGAVQKAEEILAKTPNA 145 (321)
Q Consensus 80 N~g~AlA~aa~~~G~~~~ivvp~~~~-----~~------~~~~~~~~Ga~v~~~~~~~~~---~~~~~~a~~~~~~~~~~ 145 (321)
|||+|+|++|+++|++|+||||++++ +. |+++++.|||+|+.++...+. +.+.+.+++++++.+..
T Consensus 79 N~g~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~l~~~~~~~ 158 (341)
T 1f2d_A 79 NQTRMVAALAAKLGKKCVLIQEDWVPIPEAEKDVYNRVGNIELSRIMGADVRVIEDGFDIGMRKSFANALQELEDAGHKP 158 (341)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEECCSCCCGGGTTTTTTSHHHHHHHHTTCEEEECCCCCCSSCCHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHhCCceEEEeccCCCccccccccccccccHHHHHhCCCEEEEeCCccchhHHHHHHHHHHHHHhcCCcE
Confidence 99999999999999999999999887 44 999999999999999975432 36777888888876434
Q ss_pred E-EcCC-CCCCcchhhhhhchHHHHHhhhC---CCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEecCCCCccCCCC
Q 020805 146 Y-MLQQ-FENPANPKIHYETTGPELWKGSG---GRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTESPVLSGGK 220 (321)
Q Consensus 146 ~-~~~~-~~~~~~~~~g~~~~~~Ei~~ql~---~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~~~~g~ 220 (321)
| +.++ |+||.+ ..||.+++.||++|++ ..||+||+|+|||||++|+++++|+.+|+++||+|||.+++.+....
T Consensus 159 ~~i~~~~~~np~~-~~G~~t~~~Ei~~q~~~~~~~~d~vv~~vGtGgt~~Gi~~~~k~~~~~~~vigVe~~~~~~~~~~~ 237 (341)
T 1f2d_A 159 YPIPAGCSEHKYG-GLGFVGFADEVINQEVELGIKFDKIVVCCVTGSTTAGILAGMAQYGRQDDVIAIDASFTSEKTKEQ 237 (341)
T ss_dssp EEECGGGTTSTTT-TTHHHHHHHHHHHHHHHHTCCCSEEEEEESSSHHHHHHHHHHGGGTCGGGEEEEECSSCHHHHHHH
T ss_pred EEeCCCcCCCCcc-HHHHHHHHHHHHHHHHhcCCCCCEEEEecCchHhHHHHHHHHHhcCCCceEEEEEecCchHHHHHH
Confidence 5 4578 999998 5789999999999995 47999999999999999999999999999999999999997654211
Q ss_pred C---CCcccccccCCC--CcccccccccCEEEEeCHHHHHHHHHHHHHhcCCeEec-chHHHHHHHHHHHhcCC-CCCCE
Q 020805 221 P---GPHKIQGIGAGF--VPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGI-SSGGAAAAAIEIAKRPE-NAGKL 293 (321)
Q Consensus 221 ~---~~~~~~gl~~~~--~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~Gi~~~p-ss~~a~aa~~~~~~~~~-~~~~~ 293 (321)
. ..+.+++++.+. .++.+.++++|+++.|+|+|+++++++|++++||++|| |||+++++++++++++. .++++
T Consensus 238 ~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~egi~~ep~~sa~alaa~~~~~~~~~~~~~~~ 317 (341)
T 1f2d_A 238 TLRIANNTAKLIGVEHEFKDFTLDTRFAYPCYGVPNEGTIEAIRTCAEQEGVLTDPVYEGKSMQGLIALIKEDYFKPGAN 317 (341)
T ss_dssp HHHHHHHHHHHHTCCCCCSCCCEECTTSTTBTTBCCHHHHHHHHHHHHHHSCCCCTTTHHHHHHHHHHHHHTTCSCTTCE
T ss_pred HHHHHHHHHHHcCCCCCcCeEEEecCcccceEecCCHHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHhCCCCCCCe
Confidence 1 112234565332 34567788999999999999999999999999999999 69999999999988754 47899
Q ss_pred EEEEecCCCCCCHHHHHhhc
Q 020805 294 IVVCSQFACITSDSWLIAIT 313 (321)
Q Consensus 294 vv~i~tgg~~~~~~~~~~~~ 313 (321)
||+|+|||+.+...|.+.++
T Consensus 318 Vv~i~tGG~~~~~~~~~~~~ 337 (341)
T 1f2d_A 318 VLYVHLGGAPALSAYSSFFP 337 (341)
T ss_dssp EEEEECCCGGGGGGGGGGCC
T ss_pred EEEEECCchHHhhhhHHHhc
Confidence 99999999999999887764
No 25
>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus}
Probab=100.00 E-value=5.2e-59 Score=433.64 Aligned_cols=295 Identities=22% Similarity=0.203 Sum_probs=257.6
Q ss_pred hhhhhhhccCCcceecccccCCCCce--EEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHH
Q 020805 9 AKDVTELIGNTPLVYLNNIVNGCVAR--IAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLA 86 (321)
Q Consensus 9 ~~~i~~~~~~TPL~~~~~l~~~~g~~--v~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~AlA 86 (321)
.+++.+.+|+|||+++++|++..|++ ||+|+|++|||||||||++.+++.++.++|. ++||++|+||||+|+|
T Consensus 21 ~~~v~~~~g~TPL~~~~~l~~~~g~~~~i~~K~E~~~ptGS~KdR~a~~~l~~a~~~g~-----~~vv~~SsGN~g~alA 95 (352)
T 2zsj_A 21 TPIVTLYEGNTPLIEADNLARAIGFKGKIYLKYEGLNPTGSFKDRGMTLAISKAVEAGK-----RAVICASTGNTSASAA 95 (352)
T ss_dssp CCCCCCCCCCCCEEECHHHHHHHTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTC-----CEEEECCSSHHHHHHH
T ss_pred CCceecccCCCCCeehHHHHHHhCCCceEEEEECCCCCCccHHHHHHHHHHHHHHhcCC-----CEEEEeCCchHHHHHH
Confidence 35788999999999999998777887 9999999999999999999999999998886 7899999999999999
Q ss_pred HHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhchH
Q 020805 87 FMAAAKQYRLIITMPAS-MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTG 165 (321)
Q Consensus 87 ~aa~~~G~~~~ivvp~~-~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 165 (321)
++|+++|++|+||||++ ++..|+++++.+||+|+.+++ +++++.+.+++++++. +.+|+++ +||.+ ..||.+++
T Consensus 96 ~~a~~~G~~~~i~~p~~~~~~~k~~~~~~~GA~v~~v~~--~~~~~~~~a~~l~~~~-~~~~~~~-~n~~~-~~g~~t~~ 170 (352)
T 2zsj_A 96 AYAARAGLRAYVLLPKGAVAIGKLSQAMIYGAKVLAIQG--TFDDALNIVRKIGENF-PVEIVNS-VNPYR-IEGQKTAA 170 (352)
T ss_dssp HHHHHHTCEEEEEEEGGGCCHHHHHHHHHTTCEEEEESS--CHHHHHHHHHHHHHHS-SEEECST-TCTHH-HHHHTHHH
T ss_pred HHHHhcCCcEEEEECCCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHHc-CcEECCC-CCcch-hhhHhHHH
Confidence 99999999999999998 999999999999999999996 4788999999999887 5888887 78887 68999999
Q ss_pred HHHHhhhCCCCCEEEEecCCchhHHHHHHHHHhcCC------CcEEEEEecCCCCccCCCCCC---CcccccccCCCCc-
Q 020805 166 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNP------NIKLYGIEPTESPVLSGGKPG---PHKIQGIGAGFVP- 235 (321)
Q Consensus 166 ~Ei~~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~------~~~vigv~~~~~~~~~~g~~~---~~~~~gl~~~~~~- 235 (321)
.||++|++..||+||+|+|+|||++|++.++|+.++ .++||+|||.+++.+..+++. .+.++|++.+...
T Consensus 171 ~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~~~~~~~~~g~~~~~~~t~a~gl~~~~~~~ 250 (352)
T 2zsj_A 171 FEICDTLGEAPDYHFIPVGNAGNITAYWKGFKIYYEEGKITKLPRMMGWQAEGAAPIVKGYPIKNPQTIATAIKIGNPYS 250 (352)
T ss_dssp HHHHHHHSSCCSEEEEECSSSHHHHHHHHHHHHHHHTTSCSSCCEEEEEEETTBCHHHHTSCCSSCCCSCGGGCCSSCTT
T ss_pred HHHHHHcCCCCCEEEEeCCCcHHHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCcHHhcCCccCCCcchhHHhcCCCCCc
Confidence 999999976799999999999999999999998754 689999999999776544432 2345777755421
Q ss_pred cc----ccccccCEEEEeCHHHHHHHHHHHHHhcCCeEecchHHHHHHHHHHHhcCC-CCCCEEEEEecCCC-CCCHHHH
Q 020805 236 GV----LEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPE-NAGKLIVVCSQFAC-ITSDSWL 309 (321)
Q Consensus 236 ~~----~~~~~~d~~~~V~d~e~~~a~~~l~~~~Gi~~~pss~~a~aa~~~~~~~~~-~~~~~vv~i~tgg~-~~~~~~~ 309 (321)
+. +.++..|+++.|+|+|+++++++|++++|+++||+||+++++++++++++. .++++||+|+||++ .+.+.+.
T Consensus 251 ~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~~~~~~~~~vv~i~tg~~~k~~~~~~ 330 (352)
T 2zsj_A 251 WKSALKAAQESGGKIDAVSDSEILYAYKLIASTEGVFCEPASAASVAGLIKLVREGFFKGGEVVTCTLTGNGLKDPDTAI 330 (352)
T ss_dssp HHHHHHHHHHHTCEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHTTCCCSCCEEEEEECBBGGGCHHHHH
T ss_pred HHHHHHHHHHhCCeEEEECHHHHHHHHHHHHHhCCeeECchHHHHHHHHHHHHHhCCCCCCCeEEEEeCCCCccChHHHH
Confidence 21 234567899999999999999999999999999999999999999887654 47899999999988 6777777
Q ss_pred Hhhc
Q 020805 310 IAIT 313 (321)
Q Consensus 310 ~~~~ 313 (321)
+...
T Consensus 331 ~~~~ 334 (352)
T 2zsj_A 331 KVCE 334 (352)
T ss_dssp HHCC
T ss_pred Hhcc
Confidence 6543
No 26
>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.2e-59 Score=436.09 Aligned_cols=294 Identities=22% Similarity=0.240 Sum_probs=256.7
Q ss_pred hhhhhhccCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHH
Q 020805 10 KDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMA 89 (321)
Q Consensus 10 ~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~AlA~aa 89 (321)
+++.+.+|+|||+++++|++.+|++||+|+|++|||||||||++.+++.++.++|. .+||++|+||||+|+|++|
T Consensus 30 ~~v~~~~g~TPL~~~~~l~~~~g~~i~~K~E~~~ptgSfKdR~a~~~l~~a~~~g~-----~~vv~aSsGN~g~alA~~a 104 (360)
T 2d1f_A 30 TPVTLLEGGTPLIAATNLSKQTGCTIHLKVEGLNPTGSFKDRGMTMAVTDALAHGQ-----RAVLCASTGNTSASAAAYA 104 (360)
T ss_dssp CCCCCCCCCCCEEECHHHHHHHSSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTC-----SEEEECCSSHHHHHHHHHH
T ss_pred CccccccCCCCCeechhhHHHhCCeEEEEECCCCCCcCHHHHHHHHHHHHHHHCCC-----CEEEEeCCcHHHHHHHHHH
Confidence 56888999999999999998778899999999999999999999999999998886 7899999999999999999
Q ss_pred HHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhchHHHH
Q 020805 90 AAKQYRLIITMPAS-MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPEL 168 (321)
Q Consensus 90 ~~~G~~~~ivvp~~-~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Ei 168 (321)
+++|++|+||||++ ++..|+++++.+||+|+.+++ +++++.+.+++++++.++.+++++ +||.+ +.||.+++.||
T Consensus 105 ~~~G~~~~i~~p~~~~~~~k~~~~~~~GA~v~~v~~--~~~~~~~~a~~l~~~~~~~~~i~~-~n~~~-~~g~~t~~~Ei 180 (360)
T 2d1f_A 105 ARAGITCAVLIPQGKIAMGKLAQAVMHGAKIIQIDG--NFDDCLELARKMAADFPTISLVNS-VNPVR-IEGQKTAAFEI 180 (360)
T ss_dssp HHHTCEEEEEECSSCCCHHHHHHHHHTTCEEEEBSS--CHHHHHHHHHHHHHHCTTEEECST-TCHHH-HHHHTHHHHHH
T ss_pred HHcCCcEEEEEcCCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHhcCCeEEcCC-CChhh-hhhHHHHHHHH
Confidence 99999999999998 999999999999999999996 478999999999988755888887 78887 68999999999
Q ss_pred HhhhCCCCCEEEEecCCchhHHHHHHHHHhcCC------CcEEEEEecCCCCccCCCCCC---CcccccccCCCCc-cc-
Q 020805 169 WKGSGGRIDALVSGIGTGGTITGAGKFLKEKNP------NIKLYGIEPTESPVLSGGKPG---PHKIQGIGAGFVP-GV- 237 (321)
Q Consensus 169 ~~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~------~~~vigv~~~~~~~~~~g~~~---~~~~~gl~~~~~~-~~- 237 (321)
++|++..||+||+|+|+||+++|++.++|+.++ .++||+|||++++.+..+++. .+.++|++.+..+ +.
T Consensus 181 ~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~~~~~~~~~g~~~~~~~t~a~gl~~~~~~~~~~ 260 (360)
T 2d1f_A 181 VDVLGTAPDVHALPVGNAGNITAYWKGYTEYHQLGLIDKLPRMLGTQAAGAAPLVLGEPVSHPETIATAIRIGSPASWTS 260 (360)
T ss_dssp HHHHSSCCSEEEEECSSSHHHHHHHHHHHHHHHTTSCSSCCEEEEEEEGGGCHHHHSSCCSSCCCSCGGGCCSSCTTHHH
T ss_pred HHHcCCCCCEEEEeCCchHHHHHHHHHHHHHHhccccccCceEEEEecCCCCHHhcCCccCCccchHHHhCCCCCCcHHH
Confidence 999976799999999999999999999998753 689999999998776544432 2345777755421 11
Q ss_pred ---ccccccCEEEEeCHHHHHHHHHHHHHhcCCeEecchHHHHHHHHHHHhcCC-CCCCEEEEEecCCC-CCCHHHHHhh
Q 020805 238 ---LEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPE-NAGKLIVVCSQFAC-ITSDSWLIAI 312 (321)
Q Consensus 238 ---~~~~~~d~~~~V~d~e~~~a~~~l~~~~Gi~~~pss~~a~aa~~~~~~~~~-~~~~~vv~i~tgg~-~~~~~~~~~~ 312 (321)
+.+++.|+++.|+|+|+++++++|++++|+++||+||+++++++++++++. .++++||+|+||++ .+.+.+.+..
T Consensus 261 ~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~eGi~~epssa~alaa~~~~~~~~~~~~~~~vv~i~tg~~~k~~~~~~~~~ 340 (360)
T 2d1f_A 261 AVEAQQQSKGRFLAASDEEILAAYHLVARVEGVFVEPASAASIAGLLKAIDDGWVARGSTVVCTVTGNGLKDPDTALKDM 340 (360)
T ss_dssp HHHHHHHHTCEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHHTSSCTTCEEEEEECBBGGGCHHHHHSSC
T ss_pred HHHHHHHhCCeEEEECHHHHHHHHHHHHHhcCeeECchHHHHHHHHHHHHHhCCCCCCCeEEEEeCCCCcCCHHHHHHhc
Confidence 234567899999999999999999999999999999999999999887543 47889999999988 5777766544
No 27
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=100.00 E-value=7.8e-60 Score=437.31 Aligned_cols=296 Identities=19% Similarity=0.172 Sum_probs=252.0
Q ss_pred hhhhhhhhccCCcceecccccCCCCceEEEEeCCCCC--CCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeC--CChHHH
Q 020805 8 IAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEP--CSSVKDRIGYSMISDAEAKGLITPGESVLIEPT--SGNTGI 83 (321)
Q Consensus 8 ~~~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~p--tGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~S--sGN~g~ 83 (321)
.+++|.+.+++|||+++++|++.+|++||+|+|++|| +||||+|++.+++.+++++|. ++||++| +||||+
T Consensus 22 a~~ri~~~~~~TPL~~~~~l~~~~g~~v~~K~E~l~p~~~gs~K~R~~~~~l~~a~~~G~-----~~vv~~s~tsGN~g~ 96 (342)
T 4d9b_A 22 RFPRLEFIGAPTPLEYLPRLSDYLGREIYIKRDDVTPIAMGGNKLRKLEFLVADALREGA-----DTLITAGAIQSNHVR 96 (342)
T ss_dssp GSCCCCSSCSCCCEEECHHHHHHHTSCEEEEEGGGCSSTTCCTHHHHHHHHHHHHHHTTC-----CEEEEEEETTCHHHH
T ss_pred cCCcccccCCCCceeEhhhhHHhhCCEEEEEeCCCCCCCCcchHHHhHHHHHHHHHHcCC-----CEEEEcCCcccHHHH
Confidence 5568999999999999999998778999999999999 999999999999999999987 6799996 699999
Q ss_pred HHHHHHHHcCCeEEEEecCCCCH--------HHHHHHHHcCCEEEEeCCCCChhHHH-HHHHHHHHhCCCeEEc-CCCCC
Q 020805 84 GLAFMAAAKQYRLIITMPASMSL--------ERRIILRAFGAELVLTDPAKGMKGAV-QKAEEILAKTPNAYML-QQFEN 153 (321)
Q Consensus 84 AlA~aa~~~G~~~~ivvp~~~~~--------~~~~~~~~~Ga~v~~~~~~~~~~~~~-~~a~~~~~~~~~~~~~-~~~~~ 153 (321)
|+|++|+++|++|+||||++++. .|++.++.|||+|+.++...+.+++. +.++++.++.+..|++ .++.|
T Consensus 97 alA~aa~~~G~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~p~~~~n 176 (342)
T 4d9b_A 97 QTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCDALTDPDAQLQTLATRIEAQGFRPYVIPVGGSS 176 (342)
T ss_dssp HHHHHHHHHTCEEEEEEECTTCCCCHHHHHSHHHHHHHHTTCEEEECSCCSSHHHHHHHHHHHHHHTTCCEEECCGGGCS
T ss_pred HHHHHHHHhCCcEEEEEeCCCCCccccccccchHHHHHHCCCEEEEECchhhHHHHHHHHHHHHHhcCCceEEeCCCCCC
Confidence 99999999999999999998873 59999999999999999765555555 4566776665333433 23334
Q ss_pred CcchhhhhhchHHHHHhhhC--CCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEecCCCCccCCCCC---CCccccc
Q 020805 154 PANPKIHYETTGPELWKGSG--GRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTESPVLSGGKP---GPHKIQG 228 (321)
Q Consensus 154 ~~~~~~g~~~~~~Ei~~ql~--~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~~~~g~~---~~~~~~g 228 (321)
+.+ ..||.|++.||++|++ ..+|+||+|+|||||++|++.++|+.+|+++||+|||++++.+..... ..+.++|
T Consensus 177 ~~~-~~G~~t~~~EI~~q~~~~~~~d~vv~~vGtGGt~aGi~~~~k~~~~~~~vigVe~~~~~~~~~~~~~~~~~t~a~g 255 (342)
T 4d9b_A 177 ALG-AMGYVESALEIAQQCEEVVGLSSVVVASGSAGTHAGLAVGLEHLMPDVELIGVTVSRSVAEQKPKVIALQQAIAGQ 255 (342)
T ss_dssp HHH-HHHHHHHHHHHHHHHTTTCCCCEEEEEESSSHHHHHHHHHHHHHCTTSEEEEEESSSCHHHHHHHHHHHHHHHHHH
T ss_pred hHH-HHHHHHHHHHHHHHHhccCCCCEEEEeCCCCHHHHHHHHHHHhhCCCCeEEEEEecCcHHHHHHHHHHHHHHHHHH
Confidence 444 5699999999999996 479999999999999999999999999999999999999975532111 1223467
Q ss_pred ccC-CCCcccccccccCEEEEeCHHHHHHHHHHHHHhcCCeEecc-hHHHHHHHHHHHhcCC-CCCCEEEEEecCCCCCC
Q 020805 229 IGA-GFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGIS-SGGAAAAAIEIAKRPE-NAGKLIVVCSQFACITS 305 (321)
Q Consensus 229 l~~-~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~Gi~~~ps-s~~a~aa~~~~~~~~~-~~~~~vv~i~tgg~~~~ 305 (321)
|+. +..++.+.++++|+++.|+|+|+++++++|++++||++||+ ||+++++++++++++. .++++||+|+||||++.
T Consensus 256 l~~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epsYsa~a~aa~~~~~~~~~~~~~~~Vv~i~tGGn~~~ 335 (342)
T 4d9b_A 256 LALTATADIHLWDDYFAPGYGVPNDAGMEAVKLLASLEGVLLDPVYTGKAMAGLIDGISQKRFNDDGPILFIHTGGAPAL 335 (342)
T ss_dssp TTCCCCCCCEEECTTSTTCTTCCCHHHHHHHHHHHHHHSCCCCTTTHHHHHHHHHHHHHHTCSSSSSCEEEEECCCTTHH
T ss_pred cCCCCccceEEEecCCCceEecCCHHHHHHHHHHHHhcCccccccHHHHHHHHHHHHHHcCCCCCCCeEEEEECCCccch
Confidence 766 55678888899999999999999999999999999999996 9999999999987654 47899999999999998
Q ss_pred HHHH
Q 020805 306 DSWL 309 (321)
Q Consensus 306 ~~~~ 309 (321)
..|.
T Consensus 336 ~~~~ 339 (342)
T 4d9b_A 336 FAYH 339 (342)
T ss_dssp HHHS
T ss_pred hhcc
Confidence 8764
No 28
>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A
Probab=100.00 E-value=9.8e-59 Score=431.61 Aligned_cols=292 Identities=20% Similarity=0.190 Sum_probs=255.3
Q ss_pred hhhhhhccCCcceec--ccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHH
Q 020805 10 KDVTELIGNTPLVYL--NNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAF 87 (321)
Q Consensus 10 ~~i~~~~~~TPL~~~--~~l~~~~g~~v~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~AlA~ 87 (321)
+++.+.+|+|||+++ ++|++..|++||+|+|++|||||||||++.+++.++.++|. ++||++|+||||+|+|+
T Consensus 20 ~~v~~~~g~TPL~~~~~~~l~~~~g~~v~~K~E~~~ptgS~KdR~a~~~l~~a~~~g~-----~~vv~~SsGN~g~alA~ 94 (351)
T 3aey_A 20 PVISLLEGSTPLIPLKGPEEARKKGIRLYAKYEGLNPTGSFKDRGMTLAVSKAVEGGA-----QAVACASTGNTAASAAA 94 (351)
T ss_dssp CCCCSCCCCCCEEECCCCHHHHTTTCEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTC-----SEEEESCSSHHHHHHHH
T ss_pred CceecCCCCCCeeecCchhhHHHhCCeEEEEecCCCCcccHHHHHHHHHHHHHHhcCC-----CEEEEeCCCHHHHHHHH
Confidence 578999999999999 99988888999999999999999999999999999998886 78999999999999999
Q ss_pred HHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhchHH
Q 020805 88 MAAAKQYRLIITMPAS-MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGP 166 (321)
Q Consensus 88 aa~~~G~~~~ivvp~~-~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 166 (321)
+|+++|++|+||||++ ++..|+++++.+||+|+.+++ +++++.+.+++++++. +.+|+++ +||.+ ..||.+++.
T Consensus 95 ~a~~~G~~~~iv~p~~~~~~~k~~~~~~~GA~V~~v~~--~~~~~~~~a~~l~~~~-~~~~~~~-~n~~~-~~g~~t~~~ 169 (351)
T 3aey_A 95 YAARAGILAIVVLPAGYVALGKVAQSLVHGARIVQVEG--NFDDALRLTQKLTEAF-PVALVNS-VNPHR-LEGQKTLAF 169 (351)
T ss_dssp HHHHHTSEEEEEEETTCSCHHHHHHHHHTTCEEEEEES--CHHHHHHHHHHHHHHS-SEEECST-TCHHH-HHHHHHHHH
T ss_pred HHHHcCCCEEEEECCCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHhc-CcEecCC-CCccc-eeeeeeHHH
Confidence 9999999999999998 999999999999999999996 4788999999998887 5888887 78887 689999999
Q ss_pred HHHhhhCCCCCEEEEecCCchhHHHHHHHHHhcCC------CcEEEEEecCCCCccCCCCCC---CcccccccCCCCc-c
Q 020805 167 ELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNP------NIKLYGIEPTESPVLSGGKPG---PHKIQGIGAGFVP-G 236 (321)
Q Consensus 167 Ei~~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~------~~~vigv~~~~~~~~~~g~~~---~~~~~gl~~~~~~-~ 236 (321)
||++|++..||+||+|+|+|||++|++.++|+.++ .++||+|||.+++.+..+++. .+.++|++.+..+ +
T Consensus 170 Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~~~~~~~~~g~~~~~~~t~a~gl~~~~~~~~ 249 (351)
T 3aey_A 170 EVVDELGDAPHYHALPVGNAGNITAHWMGYKAYHALGKAKRLPRMLGFQAAGAAPLVLGRPVERPETLATAIRIGNPASW 249 (351)
T ss_dssp HHHHHHSSCCSEEEEECSSSHHHHHHHHHHHHHHHHTSCSSCCEEEEEEEGGGCHHHHTSCCSSCCCSCGGGCCSSCTTH
T ss_pred HHHHHcCCCCCEEEEecCchHHHHHHHHHHHHHHhccccCCCCeEEEEecCCCChhhcCcccCCccchhHhhcCCCCCCH
Confidence 99999976799999999999999999999998754 689999999998776544432 2345777755421 1
Q ss_pred c----ccccccCEEEEeCHHHHHHHHHHHHHhcCCeEecchHHHHHHHHHHHhcCC-CCCCEEEEEecCCC-CCCHHHHH
Q 020805 237 V----LEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPE-NAGKLIVVCSQFAC-ITSDSWLI 310 (321)
Q Consensus 237 ~----~~~~~~d~~~~V~d~e~~~a~~~l~~~~Gi~~~pss~~a~aa~~~~~~~~~-~~~~~vv~i~tgg~-~~~~~~~~ 310 (321)
. +.+++.|+++.|+|+|+++++++|++++|+++||+||+++++++++.+++. .++++||+|+||++ .+.+.+.+
T Consensus 250 ~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~~~~~~~~~vv~i~tg~~~k~~~~~~~ 329 (351)
T 3aey_A 250 QGAVRAKEESGGVIEAVTDEEILFAYRYLAREEGIFCEPASAAAMAGVFKLLREGRLEPESTVVLTLTGHGLKDPATAER 329 (351)
T ss_dssp HHHHHHHHHHTCEEEEECHHHHHHHHHHHHHHTCCCBCHHHHHHHHHHHHHHHTTCSCTTCEEEEEECBBGGGCHHHHCS
T ss_pred HHHHHHHHHhCCeEEEECHHHHHHHHHHHHHhCCEEECchHHHHHHHHHHHHHhcCCCCCCeEEEEECCCCCCCHHHHHH
Confidence 2 234567899999999999999999999999999999999999999887654 47899999999988 56666554
Q ss_pred h
Q 020805 311 A 311 (321)
Q Consensus 311 ~ 311 (321)
.
T Consensus 330 ~ 330 (351)
T 3aey_A 330 V 330 (351)
T ss_dssp C
T ss_pred h
Confidence 3
No 29
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=100.00 E-value=6.5e-60 Score=435.26 Aligned_cols=300 Identities=19% Similarity=0.165 Sum_probs=257.4
Q ss_pred ccchhhhhhhhccCCcceecccccCCCCceEEEEeCCCCC--CCchhhHHHHHHHHHHHHcCCCCCCCeEEEee--CCCh
Q 020805 5 SSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEP--CSSVKDRIGYSMISDAEAKGLITPGESVLIEP--TSGN 80 (321)
Q Consensus 5 ~~~~~~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~p--tGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~--SsGN 80 (321)
..+.++++.+.+++|||+++++|++..|++||+|+|++|| +||||+|.+.+++.+++++|. ++||++ |+||
T Consensus 8 ~l~~~~~i~~~~~~TPL~~~~~l~~~~g~~i~~K~E~~~p~~~gs~K~R~~~~~i~~a~~~G~-----~~vv~~G~ssGN 82 (325)
T 1j0a_A 8 LLAKFPRVELIPWETPIQYLPNISREIGADVYIKRDDLTGLGIGGNKIRKLEYLLGDALSKGA-----DVVITVGAVHSN 82 (325)
T ss_dssp HHTTCCCCCCCCSCCCEEECHHHHHHHTSEEEEEEGGGSCSTTCSTHHHHHHHHHHHHHHTTC-----SEEEEECCTTCH
T ss_pred hhccCCCcccccCCCCceEhhhhhhhhCCEEEEEecccCCCCCCchHHHHHHHHHHHHHHcCC-----CEEEEcCCcchH
Confidence 3456678899999999999999987778899999999999 999999999999999999986 679997 9999
Q ss_pred HHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCCCCChh---HHHHHHHHHHHhCCCeE-EcCCCCCCc
Q 020805 81 TGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDPAKGMK---GAVQKAEEILAKTPNAY-MLQQFENPA 155 (321)
Q Consensus 81 ~g~AlA~aa~~~G~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~~~~~~~~~---~~~~~a~~~~~~~~~~~-~~~~~~~~~ 155 (321)
||+|+|++|+++|++|+||||+++ +..|+++++.|||+|+.++.+.+.. ++.+.+++++++.+..| +..++.|+.
T Consensus 83 ~g~alA~~a~~~G~~~~iv~p~~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~p~~~~n~~ 162 (325)
T 1j0a_A 83 HAFVTGLAAKKLGLDAILVLRGKEELKGNYLLDKIMGIETRVYDAKDSFELMKYAEEIAEELKREGRKPYVIPPGGASPI 162 (325)
T ss_dssp HHHHHHHHHHHTTCEEEEEEESCCCSCHHHHHHHHTTCEEEEESCCSTTTHHHHHHHHHHHHTTSSCCEEEECGGGCSHH
T ss_pred HHHHHHHHHHHhCCcEEEEECCCCCCCchHHHHHHCCCEEEEeCcchhhhhhHHHHHHHHHHHHcCCceEEEcCCCCCHH
Confidence 999999999999999999999999 9999999999999999999764322 56778888887764434 445667777
Q ss_pred chhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEecCCCCccCCCCC---CCccccccc-C
Q 020805 156 NPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTESPVLSGGKP---GPHKIQGIG-A 231 (321)
Q Consensus 156 ~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~~~~g~~---~~~~~~gl~-~ 231 (321)
+ ..||.+++.||++|++..+|+||+|+|||||++|+++++|+.+|+++||+|||.+++.+..... ......+++ .
T Consensus 163 ~-~~g~~t~~~Ei~~q~~~~~d~vv~~vGtGGt~~Gi~~~lk~~~~~~~vigVe~~~~~~~~~~~~~t~~~~~~~~~g~~ 241 (325)
T 1j0a_A 163 G-TLGYVRAVGEIATQSEVKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAVGRFGEVMTSKLDNLIKEAAELLGVK 241 (325)
T ss_dssp H-HTHHHHHHHHHHHHCCCCCSEEEEEESSSHHHHHHHHHHHHTTCCCEEEEEECSSCSSSHHHHHHHHHHHHHHHTTCC
T ss_pred H-HHHHHHHHHHHHHhhCCCCCEEEEeCCchHhHHHHHHHHHhcCCCceEEEEEecCchHHHHHHHHHHHHHHHHhcCCC
Confidence 6 5688999999999997689999999999999999999999999999999999999976642110 011122344 3
Q ss_pred CCCcccccccccCEEEEeCHHHHHHHHHHHHHhcCCeEec-chHHHHHHHHHHHhcCCCCCCEEEEEecCCCCCCHHHHH
Q 020805 232 GFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGI-SSGGAAAAAIEIAKRPENAGKLIVVCSQFACITSDSWLI 310 (321)
Q Consensus 232 ~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~Gi~~~p-ss~~a~aa~~~~~~~~~~~~~~vv~i~tgg~~~~~~~~~ 310 (321)
+..|+.++++++|+ +.|+|+|+++++++|++++|+++|| |||++++++++++++... +++||+|+|||+.+.+.+.+
T Consensus 242 ~~~~~~~~~~~~~~-~~v~d~e~~~a~~~l~~~~gi~~ep~ssa~a~aa~~~~~~~~~~-~~~Vv~i~tGG~~~~~~~~~ 319 (325)
T 1j0a_A 242 VEVRPELYDYSFGE-YGKITGEVAQIIRKVGTREGIILDPVYTGKAFYGLVDLARKGEL-GEKILFIHTGGISGTFHYGD 319 (325)
T ss_dssp CCSCCEEEECSTTS-TTCCCHHHHHHHHHHHHHHSCCCCTTTHHHHHHHHHHHHHTTCS-CSEEEEEECCCHHHHHHTHH
T ss_pred CCCCcEEecCcccC-CCCCCHHHHHHHHHHHHhhCcccccchHHHHHHHHHHHHHcCCC-CCcEEEEECCCchhhhchHH
Confidence 34677888899999 9999999999999999999999999 599999999999887544 89999999999999888776
Q ss_pred hh
Q 020805 311 AI 312 (321)
Q Consensus 311 ~~ 312 (321)
..
T Consensus 320 ~~ 321 (325)
T 1j0a_A 320 KL 321 (325)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 30
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=100.00 E-value=2.4e-58 Score=439.92 Aligned_cols=298 Identities=19% Similarity=0.227 Sum_probs=255.0
Q ss_pred hhhccCCcceeccccc----CCC----CceEEEEeCCCCC-CCchhhHHHHHHHHH-----HHHcCCCCCCC--------
Q 020805 13 TELIGNTPLVYLNNIV----NGC----VARIAAKLEMMEP-CSSVKDRIGYSMISD-----AEAKGLITPGE-------- 70 (321)
Q Consensus 13 ~~~~~~TPL~~~~~l~----~~~----g~~v~~K~E~~~p-tGS~K~R~a~~~l~~-----a~~~g~~~~g~-------- 70 (321)
+.++++|||+++++|+ +.+ +.+||+|+|++|| |||||+|++.+++.. ++++|.+++|.
T Consensus 73 ~~g~~~TPL~~~~~l~~~l~~~~g~~~~~~v~lK~E~~~p~tGSfK~Rga~~~i~~l~~~~a~~~G~l~~g~~~~~l~~~ 152 (442)
T 3ss7_X 73 TGGIIESELVAIPAMQKRLEKEYQQPISGQLLLKKDSHLPISGSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSP 152 (442)
T ss_dssp GTTCCCCCEEECHHHHHHHHHHHTCCCCSEEEEEEGGGCTTTSBTHHHHHHHHHHHHHHHHHHHTTSCCTTSCGGGGGSH
T ss_pred cCCCCCCCcEEhHhhhhHHHHhhCCCcCCeEEEeecCCCCCCCCcHHHHHHHHHHHHhHHHHHHcCCCCCCcchhhhhhh
Confidence 3456899999999887 544 3799999999999 999999999999986 78899988876
Q ss_pred --------eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhC
Q 020805 71 --------SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKT 142 (321)
Q Consensus 71 --------~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~ 142 (321)
.+|+++|+||||+|+|++|+++|++|+||||++++..|+++++.|||+|+.+++ +++++.+.+++++++.
T Consensus 153 ~~r~~~~~~~vv~aSsGNhg~avA~~aa~~G~~~~Ivmp~~~~~~k~~~~r~~GA~Vv~v~~--~~~~a~~~a~~~a~~~ 230 (442)
T 3ss7_X 153 EFKQFFSQYSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQ--DYGVAVEEGRKAAQSD 230 (442)
T ss_dssp HHHHHHHTSEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEESS--CHHHHHHHHHHHHHTC
T ss_pred hhhhhccCcEEEEECCCHHHHHHHHHHHHhCCcEEEEECCCCCHHHHHHHHHCCCEEEEECC--CHHHHHHHHHHHHHhC
Confidence 489999999999999999999999999999999999999999999999999996 5789999999999887
Q ss_pred CCeEEcCCCCCCcchhhhhhchHHHHHhhhCC--------CCCEEEEecCCchhHHHHHHHHHhc-CCCcEEEEEecCCC
Q 020805 143 PNAYMLQQFENPANPKIHYETTGPELWKGSGG--------RIDALVSGIGTGGTITGAGKFLKEK-NPNIKLYGIEPTES 213 (321)
Q Consensus 143 ~~~~~~~~~~~~~~~~~g~~~~~~Ei~~ql~~--------~~d~vv~p~G~Gg~~aGi~~~~k~~-~~~~~vigv~~~~~ 213 (321)
+++|+++++ |+.+++.||.|++.||++|++. .||+||+|+|+||+++|++.++|+. +|+++||+|||.++
T Consensus 231 ~~~~~i~~~-n~~~~~~G~~t~g~Ei~eQl~~~g~~vD~~~Pd~VvvpvG~GG~~aGi~~~lk~~~~~~v~vigVep~~~ 309 (442)
T 3ss7_X 231 PNCFFIDDE-NSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHS 309 (442)
T ss_dssp TTEEECCTT-TCHHHHHHHHHHHHHHHHHHHHHTCCCBTTBCEEEEEECSSSHHHHHHHHHHHHHHGGGEEEEEEEETTC
T ss_pred CCceeCCCC-ChHHHHHHHHHHHHHHHHHHHhhcCcccccCCCEEEEEeCCchHHHHHHHHHHHhcCCCCEEEEEEeCCc
Confidence 678999884 5656689999999999999842 3669999999999999999999987 89999999999999
Q ss_pred CccC----CCCC-----------CCcccccccCCCC---cccccccccCEEEEeCHHHHHHHHHHHHHhcCCeEecchHH
Q 020805 214 PVLS----GGKP-----------GPHKIQGIGAGFV---PGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGG 275 (321)
Q Consensus 214 ~~~~----~g~~-----------~~~~~~gl~~~~~---~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~Gi~~~pss~~ 275 (321)
+++. .|.. ..+.++||+.+.. .+.+.++.+|+++.|+|+|++++++.|++++|+++||+||+
T Consensus 310 ~~~~~~~~~G~~~~~~v~~~g~~~~TiAdgl~v~~~~~~~~~~~~~~~d~~~~Vsd~e~~~a~~~L~~~eGi~~epssaa 389 (442)
T 3ss7_X 310 PCMLLGVHTGLHDQISVQDIGIDNLTAADGLAVGRASGFVGRAMERLLDGFYTLSDQTMYDMLGWLAQEEGIRLEPSALA 389 (442)
T ss_dssp CHHHHHHHHSCGGGCBGGGGTCCCCCSCGGGCCSBCCSSHHHHHGGGCCEEEEECHHHHHHHHHHHHHHHCCCCCGGGGG
T ss_pred hHHHHHHhcCCCceeeeccCCCchhhHHhhcCCCCCchhHHHHHHhhCCeEEEECHHHHHHHHHHHHHHCCCeEcHHHHH
Confidence 8642 2222 2234566665432 22345688999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcC------C-C----CCCEEEEEecCCCCCCHHHHHhhc
Q 020805 276 AAAAAIEIAKRP------E-N----AGKLIVVCSQFACITSDSWLIAIT 313 (321)
Q Consensus 276 a~aa~~~~~~~~------~-~----~~~~vv~i~tgg~~~~~~~~~~~~ 313 (321)
++++++++++.. . . ++++||+++|||+.++.+-+++|-
T Consensus 390 alAa~~~l~~~~~~~~~~~l~~~~~~~~~vv~i~TGG~~~~~~~~~~~~ 438 (442)
T 3ss7_X 390 GMAGPQRVCASVSYQQMHGFSAEQLRNTTHLVWATGGGMVPEEEMNQYL 438 (442)
T ss_dssp GGGHHHHHHHCHHHHHHHTCCHHHHHTCEEEEEECBCTTCCHHHHHHHH
T ss_pred HHHHHHHHHhchhhHHhcCCCcccCCCCeEEEEECCCCCCCHHHHHHHH
Confidence 999999987631 1 1 278999999999999888777664
No 31
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=100.00 E-value=1.2e-57 Score=430.75 Aligned_cols=298 Identities=18% Similarity=0.175 Sum_probs=251.5
Q ss_pred hhccCCcceecccccCCCC-ceEEEEeCCCC-CCCchhhHHHHHHHHHHH--HcCC----CC-------CCCe-EEEeeC
Q 020805 14 ELIGNTPLVYLNNIVNGCV-ARIAAKLEMME-PCSSVKDRIGYSMISDAE--AKGL----IT-------PGES-VLIEPT 77 (321)
Q Consensus 14 ~~~~~TPL~~~~~l~~~~g-~~v~~K~E~~~-ptGS~K~R~a~~~l~~a~--~~g~----~~-------~g~~-~vv~~S 77 (321)
..+++|||+++++|++.+| .+||+|+|++| ||||||||++.+++.++. +.|. +. .+.+ +||++|
T Consensus 40 ~~~~~TPL~~~~~l~~~~g~~~i~~K~E~~~~ptgSfK~Rga~~~i~~~~~~~~G~~~~~l~~e~l~~~~~~~~~vv~aS 119 (398)
T 4d9i_A 40 AGYRPTPLCALDDLANLFGVKKILVKDESKRFGLNAFXMLGGAYAIAQLLCEKYHLDIETLSFEHLKNAIGEKMTFATTT 119 (398)
T ss_dssp TTCCCCCEEECHHHHHHHTSSEEEEEEGGGSTTTTBSTHHHHHHHHHHHHHHHHTCCGGGCCHHHHHHCCSCCCEEEEEC
T ss_pred CCCCCCCceehHHHHHHhCCCcEEEEECCCCCCCCcchhhhhHHHHHHHHHHhhcccccccchhhhhhhccCCCEEEEEC
Confidence 4579999999999998888 59999999999 999999999999999884 3331 00 1125 899999
Q ss_pred CChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCC-----CC
Q 020805 78 SGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ-----FE 152 (321)
Q Consensus 78 sGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~-----~~ 152 (321)
+||||+|+|++|+++|++|+||||++++..|+++++.+||+|+.+++ +++++.+.+++++++. +++|++| |+
T Consensus 120 sGNhg~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~--~~~~a~~~a~~~~~~~-g~~~v~~~~~~g~~ 196 (398)
T 4d9i_A 120 DGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVTDM--NYDDTVRLTMQHAQQH-GWEVVQDTAWEGYT 196 (398)
T ss_dssp SSHHHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHTTTCEEEECSS--CHHHHHHHHHHHHHHH-TCEECCSSCBTTBC
T ss_pred CCHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHHc-CCEEecCcccCCcC
Confidence 99999999999999999999999999999999999999999999996 5789999999998887 7899986 65
Q ss_pred -CCcchhhhhhchHHHHHhhhCCC---CCEEEEecCCchhHHHHHHHHHhc--CCCcEEEEEecCCCCccC----CCCCC
Q 020805 153 -NPANPKIHYETTGPELWKGSGGR---IDALVSGIGTGGTITGAGKFLKEK--NPNIKLYGIEPTESPVLS----GGKPG 222 (321)
Q Consensus 153 -~~~~~~~g~~~~~~Ei~~ql~~~---~d~vv~p~G~Gg~~aGi~~~~k~~--~~~~~vigv~~~~~~~~~----~g~~~ 222 (321)
|+.+.+.||.|++.||++|+++. ||+||+|+|+||+++|++.++|+. .+.++||+|||.+++.+. .|++.
T Consensus 197 ~~~~~~~~G~~t~~~Ei~~q~~~~g~~~d~vvvpvG~GG~~aGi~~~~k~~~~~~~~~vigVep~~~~~~~~s~~~g~~~ 276 (398)
T 4d9i_A 197 KIPTWIMQGYATLADEAVEQMREMGVTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHSIIVEPDKADCIYRSGVKGDIV 276 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEECSSSHHHHHHHHHHHHHHCTTSCEEEEEEETTSCHHHHHHHHTSCC
T ss_pred CCCchhhhhHHHHHHHHHHHhhhcCCCCCEEEEecCccHHHHHHHHHHHHhcCCCCCEEEEEEeCCCchHHHHHHcCCce
Confidence 34556899999999999999544 999999999999999999999876 478999999999998764 23332
Q ss_pred ------CcccccccCCCC---cccccccccCEEEEeCHHHHHHHHHHHHHhcC----CeEecchHHHHHHHHHHH-----
Q 020805 223 ------PHKIQGIGAGFV---PGVLEVNIIDEVVQVSSDEAIETAKLLALKEG----LFVGISSGGAAAAAIEIA----- 284 (321)
Q Consensus 223 ------~~~~~gl~~~~~---~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~G----i~~~pss~~a~aa~~~~~----- 284 (321)
.+..+|++.+.. .+.+.++++|+++.|+|+|+++++++|++++| +++||+||++++++++++
T Consensus 277 ~~~~~~~tia~gl~~~~p~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~eG~~~~i~~epssa~alaa~~~~~~~~~~ 356 (398)
T 4d9i_A 277 NVGGDMATIMAGLACGEPNPLGWEILRNCATQFISCQDSVAALGMRVLGNPYGNDPRIISGESGAVGLGVLAAVHYHPQR 356 (398)
T ss_dssp CC------CCTTCCCSSCCHHHHHHHHHHCCEEEEECTHHHHHHHHHHHSCSTTCCCCCCCHHHHHHHHHHHHHHHSTTH
T ss_pred ecCCCCCceeccccCCCCCHHHHHHHHHcCCeEEEECHHHHHHHHHHHHHhhCCCCcEEECchHHHHHHHHHHhhhhhhh
Confidence 223455554322 23344678999999999999999999999999 999999999999999884
Q ss_pred ----hcCC-CCCCEEEEEecCCCCCCHHHHHhhcC
Q 020805 285 ----KRPE-NAGKLIVVCSQFACITSDSWLIAITC 314 (321)
Q Consensus 285 ----~~~~-~~~~~vv~i~tgg~~~~~~~~~~~~~ 314 (321)
+++. .++++||+|+|||+++.+.|.+....
T Consensus 357 ~~l~~~~~~~~~~~Vv~i~tGG~~d~~~~~~~~~~ 391 (398)
T 4d9i_A 357 QSLMEKLALNKDAVVLVISTEGDTDVKHYREVVWE 391 (398)
T ss_dssp HHHHHHTTCCTTCEEEEEECBCCSSHHHHHHHHTT
T ss_pred HHHHHhcCCCCCCEEEEEeCCCCCCHHHHHHHHhc
Confidence 3333 47899999999999999999886654
No 32
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=100.00 E-value=1.7e-57 Score=421.52 Aligned_cols=299 Identities=16% Similarity=0.181 Sum_probs=248.7
Q ss_pred chhhhhhhhccCCcceecccccCCC-C-ceEEEEeCCCC-C--CCchhhHHHHHHHHHHHHcCCCCCCCeEEEe--eCCC
Q 020805 7 NIAKDVTELIGNTPLVYLNNIVNGC-V-ARIAAKLEMME-P--CSSVKDRIGYSMISDAEAKGLITPGESVLIE--PTSG 79 (321)
Q Consensus 7 ~~~~~i~~~~~~TPL~~~~~l~~~~-g-~~v~~K~E~~~-p--tGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~--~SsG 79 (321)
+.++++.+.+++|||+++++|++.+ | .+||+|+|++| | |||||||++.+++.++.++|. ++||+ +|+|
T Consensus 4 ~~~~~i~~~~~~TPL~~~~~l~~~~~g~~~i~~K~E~~n~p~~~gs~K~R~a~~~l~~a~~~g~-----~~vv~~GassG 78 (338)
T 1tzj_A 4 QRFPRYPLTFGPTPIQPLARLSKHLGGKVHLYAKREDCNSGLAFGGNKTRKLEYLIPEALAQGC-----DTLVSIGGIQS 78 (338)
T ss_dssp GGSCCCCCSSSSCCEEECHHHHHHTTSSSEEEEEEGGGSCSSTTCCHHHHHHHTTHHHHHHTTC-----CEEEEEEETTC
T ss_pred ccCCccccCCCCCccEEHHHHHHhhCCCceEEEEeCCCCCCCCCCchHHHHHHHHHHHHHHcCC-----CEEEEcCCchh
Confidence 3456899999999999999998877 7 89999999996 8 999999999999999998886 67888 7999
Q ss_pred hHHHHHHHHHHHcCCeEEEEecCCCCHH--------HHHHHHHcCCEEEEeCCCCChh---HHHHHHHHHHHhCCCeEEc
Q 020805 80 NTGIGLAFMAAAKQYRLIITMPASMSLE--------RRIILRAFGAELVLTDPAKGMK---GAVQKAEEILAKTPNAYML 148 (321)
Q Consensus 80 N~g~AlA~aa~~~G~~~~ivvp~~~~~~--------~~~~~~~~Ga~v~~~~~~~~~~---~~~~~a~~~~~~~~~~~~~ 148 (321)
|||+|+|++|+++|++|+||||++++.. |+++++.+||+|+.++.+.+.. .+.+.+++++++.+..|++
T Consensus 79 N~g~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~ 158 (338)
T 1tzj_A 79 NQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQMSRILGADVRLVPDGFDIGFRRSWEDALESVRAAGGKPYAI 158 (338)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEECCSSCCCTTTTTSHHHHHHHHTTCEEEECCC-------CHHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHHhCCceEEEecCCCCccccccccCccHHHHHhCCCEEEEeCCcchhhHHHHHHHHHHHHHhcCCceEEe
Confidence 9999999999999999999999988765 9999999999999998753211 2467788888776444554
Q ss_pred -CC-CCCCcchhhhhhchHHHHHhhhC---CCCCEEEEecCCchhHHHHHHHHHhc-CCCcEEEEEecCCCCccCCCCC-
Q 020805 149 -QQ-FENPANPKIHYETTGPELWKGSG---GRIDALVSGIGTGGTITGAGKFLKEK-NPNIKLYGIEPTESPVLSGGKP- 221 (321)
Q Consensus 149 -~~-~~~~~~~~~g~~~~~~Ei~~ql~---~~~d~vv~p~G~Gg~~aGi~~~~k~~-~~~~~vigv~~~~~~~~~~g~~- 221 (321)
++ |+||.+ ..||.+++.||++|++ ..||+||+|+|+|||++|+++++|+. +|. +||+|+|++++.+.....
T Consensus 159 p~~~~~n~~~-~~g~~t~~~Ei~~q~~~~~~~~d~vv~~vG~GGt~~Gi~~~~k~~g~~~-~vigve~~~~~~~~~~~~~ 236 (338)
T 1tzj_A 159 PAGCSDHPLG-GLGFVGFAEEVRAQEAELGFKFDYVVVCSVTGSTQAGMVVGFAADGRAD-RVIGVDASAKPAQTREQIT 236 (338)
T ss_dssp CGGGTSSTTT-TTHHHHHHHHHHHHHHHHTSCCSEEEEEESSSHHHHHHHHHHHTTTCGG-GEEEEECSSCHHHHHHHHH
T ss_pred CCCcCCCccc-HHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcHHHHHHHHHHHhhCCCC-eEEEEEccCchHHHHHHHH
Confidence 45 899998 6789999999999995 47999999999999999999999998 888 999999999875532111
Q ss_pred --CCcccccccCCC----CcccccccccCEEEEeCHHHHHHHHHHHHHhcCCeEecc-hHHHHHHHHHHHhcCC-CCCCE
Q 020805 222 --GPHKIQGIGAGF----VPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGIS-SGGAAAAAIEIAKRPE-NAGKL 293 (321)
Q Consensus 222 --~~~~~~gl~~~~----~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~Gi~~~ps-s~~a~aa~~~~~~~~~-~~~~~ 293 (321)
..+..++++.+. .++.+.++++|+++.|+|+|+++++++|++++|+++||+ ||+++++++++++++. .++++
T Consensus 237 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~ep~ysa~alaa~~~~~~~~~~~~~~~ 316 (338)
T 1tzj_A 237 RIARQTAEKVGLERDIMRADVVLDERFAGPEYGLPNEGTLEAIRLCARTEGMLTDPVYEGKSMHGMIEMVRNGEFPEGSR 316 (338)
T ss_dssp HHHHHHHHHHTCSSCCCGGGCEEECTTSCSBTTBCCHHHHHHHHHHHHHHSCCCCTTTHHHHHHHHHHHHHTTCSCTTCE
T ss_pred HHHHHHHHHcCCCCCCCcccEEEecCcccceeecCCHHHHHHHHHHHHhcCCccccchHHHHHHHHHHHHHcCCCCCCCe
Confidence 012233444222 233456778899999999999999999999999999995 9999999999988754 47899
Q ss_pred EEEEecCCCCCCHHHHHhh
Q 020805 294 IVVCSQFACITSDSWLIAI 312 (321)
Q Consensus 294 vv~i~tgg~~~~~~~~~~~ 312 (321)
||+|+|||+.+++.|.+..
T Consensus 317 Vv~i~tGG~~~~~~~~~~~ 335 (338)
T 1tzj_A 317 VLYAHLGGVPALNGYSFIF 335 (338)
T ss_dssp EEEEECCCGGGGGGGTGGG
T ss_pred EEEEECCCcccccchHHHh
Confidence 9999999999998876543
No 33
>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix} SCOP: c.79.1.1
Probab=100.00 E-value=5.4e-55 Score=409.31 Aligned_cols=288 Identities=23% Similarity=0.275 Sum_probs=243.2
Q ss_pred hhhhhhhc---cCCcceecccccCCCCceEEEEeCCCCC-CCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHH
Q 020805 9 AKDVTELI---GNTPLVYLNNIVNGCVARIAAKLEMMEP-CSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIG 84 (321)
Q Consensus 9 ~~~i~~~~---~~TPL~~~~~l~~~~g~~v~~K~E~~~p-tGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~A 84 (321)
++.+...+ .+|||+++++|++. |++||+|+|++|| |||||+|++.+++..+. +.+++| ++|+++|+||||+|
T Consensus 84 ~~~~~~~~g~~~~TPL~~l~~Ls~~-g~~IylK~E~lnp~tGS~K~R~a~~~i~~l~--~a~~~g-~~Iv~assGNhG~A 159 (389)
T 1wkv_A 84 FPSPLDFFERGKPTPLVRSRLQLPN-GVRVWLKLEWYNPFSLSVKDRPAVEIISRLS--RRVEKG-SLVADATSSNFGVA 159 (389)
T ss_dssp ESSHHHHHHHSCSCCEEECCCCCST-TEEEEEEEGGGSTTTSBTTHHHHHHHHHHHT--TTSCTT-CEEEEECCHHHHHH
T ss_pred HHHHHHHhCCCCCCCeEEccccccC-CCeEEEEEcCCCCCcCChHHHHHHHHHHHHH--HHHhcC-CEEEEECCcHHHHH
Confidence 34444544 46999999999876 8899999999999 99999999999999854 334455 68999999999999
Q ss_pred HHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE-EeCCCCChhHHHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhc
Q 020805 85 LAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV-LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYET 163 (321)
Q Consensus 85 lA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~-~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 163 (321)
+|++|+++|++|+||||+.++..|+.+++.+||+|+ .++. .+++++.+.+.+++++. +.+|++||+||.+++.||++
T Consensus 160 lA~aaa~~Gl~~~ivmp~~~~~~k~~~~~~~GAeVv~~v~~-~~~~da~~~a~~~~~~~-g~~~~~p~~N~~~~~~~~~t 237 (389)
T 1wkv_A 160 LSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDPEA-PSTVHLLPRVMKDSKNE-GFVHVNQFYNDANFEAHMRG 237 (389)
T ss_dssp HHHHHHHTTCEEEEEEETTSCHHHHHHHHHTTCEEEEETTC-SSSGGGHHHHHHHHHHH-CCEECCTTTCHHHHHHHHHT
T ss_pred HHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEEcCC-CCHHHHHHHHHHHHHcc-CcEecCcCCChHHHHHHHHH
Confidence 999999999999999999999999999999999999 7773 25688888888888775 78999999999888899999
Q ss_pred hHHHHHhhhC---CCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEecCCCCccCCCCCCCcccccccCCCCcccccc
Q 020805 164 TGPELWKGSG---GRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGIGAGFVPGVLEV 240 (321)
Q Consensus 164 ~~~Ei~~ql~---~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~~~~g~~~~~~~~gl~~~~~~~~~~~ 240 (321)
++.||++|+. ..||+||+|+|+||+++|++.+||+.+|.++||+|||.+++.+.+ +..+.. .|..+..
T Consensus 238 ~g~Ei~~Q~~~~g~~~D~vv~~vG~GG~~~Gi~~~~k~~~p~vrvigVe~~~~~~l~G-------i~~i~~--~~~~~~~ 308 (389)
T 1wkv_A 238 TAREIFVQSRRGGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRAVLVQPAQGDSIPG-------IRRVET--GMLWINM 308 (389)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCSSSHHHHHHHHHHHHHCTTCEEEEEEECTTCCCTT-------CCCGGG--CCSHHHH
T ss_pred HHHHHHHHHHhcCCCCCEEEEeCCchHhHHHHHHHHHHhCCCCeEEEEecCCCCcccc-------ccccCC--cchhhhh
Confidence 9999999994 369999999999999999999999999999999999999866532 111111 1223344
Q ss_pred cccC-EEEEeCHHHHHHHHHHHHHhcCCeEecchHHHHHHHHHHHhcCCCCCCEEEEEecC-CCCCCHHHHHh
Q 020805 241 NIID-EVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVVCSQF-ACITSDSWLIA 311 (321)
Q Consensus 241 ~~~d-~~~~V~d~e~~~a~~~l~~~~Gi~~~pss~~a~aa~~~~~~~~~~~~~~vv~i~tg-g~~~~~~~~~~ 311 (321)
..+| +++.|+|+|+++++++|++++||+++|+||+++++++++++++..+++++|+++|| |..+.+.+.+.
T Consensus 309 ~~~dg~~~~Vsd~ea~~a~~~l~~~eGi~~~pssa~alaa~~~l~~~g~~~~~~vVviltg~G~k~~~~~~~~ 381 (389)
T 1wkv_A 309 LDISYTLAEVTLEEAMEAVVEVARSDGLVIGPSGGAAVKALAKKAAEGDLEPGDYVVVVPDTGFKYLSLVQNA 381 (389)
T ss_dssp SCCCCEEEEECHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHHHTTCSCSEEEEEEECBBGGGCHHHHHHH
T ss_pred heeccEEEEECHHHHHHHHHHHHHHcCCeEChHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCccCHHHHHHH
Confidence 5677 99999999999999999999999999999999999999988754444568889998 56777766543
No 34
>1x1q_A Tryptophan synthase beta chain; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.50A {Thermus thermophilus}
Probab=100.00 E-value=4.7e-53 Score=401.31 Aligned_cols=294 Identities=20% Similarity=0.199 Sum_probs=230.3
Q ss_pred hhcc-CCcceecccccCCC-CceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHH
Q 020805 14 ELIG-NTPLVYLNNIVNGC-VARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAA 91 (321)
Q Consensus 14 ~~~~-~TPL~~~~~l~~~~-g~~v~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~ 91 (321)
..++ +|||+++++|++.+ +.+||+|+|++|||||||+|++.+++..+.++|+ ...|+++|+||||+|+|++|++
T Consensus 72 ~~ig~~TPL~~~~~Ls~~~gg~~i~lK~E~l~ptGSfK~R~a~~~i~~a~~~g~----~~vI~~~ssGNhg~avA~aaa~ 147 (418)
T 1x1q_A 72 QFAGRPTPLYHAKRLSEYWGGAQVFLKREDLLHTGAHKINNTLGQALLARRMGK----RRVIAETGAGQHGVSVATVAAL 147 (418)
T ss_dssp HTTCCSCCEEECHHHHHHHTSSEEEEEEGGGSGGGBTTHHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHHHHHH
T ss_pred cccCCCCCcEEhHHhHhhcCCceEEEEEccCCcCccHHHHHHHHHHHHHHHcCC----CEEEEecCchHHHHHHHHHHHH
Confidence 5675 59999999999877 5899999999999999999999999998888776 1344568999999999999999
Q ss_pred cCCeEEEEecCCC---CHHHHHHHHHcCCEEEEeCC-CCChhHHHHHHHH-HHHhCCCeEE-cCCCCCCcc----hhhhh
Q 020805 92 KQYRLIITMPASM---SLERRIILRAFGAELVLTDP-AKGMKGAVQKAEE-ILAKTPNAYM-LQQFENPAN----PKIHY 161 (321)
Q Consensus 92 ~G~~~~ivvp~~~---~~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~-~~~~~~~~~~-~~~~~~~~~----~~~g~ 161 (321)
+|++|+||||+.. +..|+++++.+||+|+.++. ..+++++.+.+.+ ++++.++.+| ++++.|+.. +..||
T Consensus 148 ~Gi~~~I~mp~~~~~~~~~kv~~~~~~GA~Vv~v~~~~~~~~~a~~~a~~~~~~~~~~~~~i~~~~~n~~p~~~~v~~gq 227 (418)
T 1x1q_A 148 FGLECVVYMGEEDVRRQALNVFRMKLLGAEVRPVAAGSRTLKDATNEAIRDWITNVRTTFYILGSVVGPHPYPMMVRDFQ 227 (418)
T ss_dssp HTCEEEEEEEHHHHHTCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHTTTTEEECCCCSSSSTTHHHHHHHHH
T ss_pred cCCCEEEEECCCcchhhhHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEeCCccCCCCcHHHHHHHH
Confidence 9999999999853 23788899999999999984 3467888877754 4665445555 455544432 12599
Q ss_pred hchHHHHHhhhC----CCCCEEEEecCCchhHHHHHHHHHhc-CCCcEEEEEecCCCCcc--------CCCCCC------
Q 020805 162 ETTGPELWKGSG----GRIDALVSGIGTGGTITGAGKFLKEK-NPNIKLYGIEPTESPVL--------SGGKPG------ 222 (321)
Q Consensus 162 ~~~~~Ei~~ql~----~~~d~vv~p~G~Gg~~aGi~~~~k~~-~~~~~vigv~~~~~~~~--------~~g~~~------ 222 (321)
+|++.||++|+. ..||+||+|+|+||+++|++.++|++ +|.++||+|||.+++.. ..|.+.
T Consensus 228 ~t~~~Ei~~Ql~~~~~~~~D~vvvpvGgGG~~~Gi~~~~k~l~~p~~~vigVe~~g~~~~~~~~~~~l~~G~~~~~~g~~ 307 (418)
T 1x1q_A 228 SVIGEEVKRQSLELFGRLPDALIAAVGGGSNAIGLFAPFAYLPEGRPKLIGVEAAGEGLSTGRHAASIGAGKRGVLHGSY 307 (418)
T ss_dssp THHHHHHHHHHHHHHSSCCSEEEEECSSSSHHHHHHHHHHTSCTTCCEEEEEEECCTTSSSCHHHHHHHHTCEEEETTEE
T ss_pred HHHHHHHHHHHHhhcCCCCCEEEEecCCcHhHHHHHHHHHHhCCCCCeEEEEecCCcccccHHHHHHHHcCCeeeecccc
Confidence 999999999983 35999999999999999999999987 89999999999997421 122211
Q ss_pred --------------CcccccccCCCC---cccccccccCEEEEeCHHHHHHHHHHHHHhcCCeEecchHHHHHHHHHHHh
Q 020805 223 --------------PHKIQGIGAGFV---PGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAK 285 (321)
Q Consensus 223 --------------~~~~~gl~~~~~---~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~Gi~~~pss~~a~aa~~~~~~ 285 (321)
.+..+||..+.+ .+.+....+|+++.|+|+|+++++++|++++|++++|++|+++++++++.+
T Consensus 308 ~~~~~~~~g~~~~~~tia~gl~~~~~g~~~~~l~~~~~~~~~~Vsd~e~~~a~~~l~~~egi~~~~~sa~a~a~a~~~~~ 387 (418)
T 1x1q_A 308 MYLLYDHDGQITPAHSVSAGLDYPGVGPEHSYYADAGVAEYASVTDEEALEGFKLLARLEGIIPALESAHAIAYAAKVVP 387 (418)
T ss_dssp EEBCCC----------------CSBCCHHHHHHHHHTSEEEEEECHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHTT
T ss_pred ccccccccccccCCceeeeccCCCCCCHHHHHHHhccCeEEEEECHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHH
Confidence 123345543221 122445567899999999999999999999999999999999999998876
Q ss_pred cCCCCCCEEEEEecCC-CCCCHHHHHhh
Q 020805 286 RPENAGKLIVVCSQFA-CITSDSWLIAI 312 (321)
Q Consensus 286 ~~~~~~~~vv~i~tgg-~~~~~~~~~~~ 312 (321)
+. .++++||+++||+ ++|.+.+.+..
T Consensus 388 ~~-~~~~~Vv~vlsG~g~kd~~~~~~~~ 414 (418)
T 1x1q_A 388 EM-DKDQVVVINLSGRGDKDVTEVMRLL 414 (418)
T ss_dssp TS-CTTCEEEEEECBBGGGTHHHHHHTC
T ss_pred hc-CCCCeEEEEECCCCCCCHHHHHHHh
Confidence 43 3789999999994 67887776543
No 35
>1v8z_A Tryptophan synthase beta chain 1; beta+alpha, riken structural genomics/proteomics initiative, structural genomics, lyase; HET: PLP; 2.21A {Pyrococcus furiosus} SCOP: c.79.1.1 PDB: 1wdw_B*
Probab=100.00 E-value=1.6e-52 Score=394.96 Aligned_cols=298 Identities=21% Similarity=0.224 Sum_probs=236.9
Q ss_pred hhhhhhhhccC-CcceecccccCCCC-ceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEE-eeCCChHHHH
Q 020805 8 IAKDVTELIGN-TPLVYLNNIVNGCV-ARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLI-EPTSGNTGIG 84 (321)
Q Consensus 8 ~~~~i~~~~~~-TPL~~~~~l~~~~g-~~v~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv-~~SsGN~g~A 84 (321)
+.+.+...+++ |||+++++|++.+| ++||+|+|++|||||||||++.+++..+.++|. .++| ++|+||||+|
T Consensus 39 ~~~~~~~~ig~~TPL~~~~~l~~~~g~~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~-----~~vv~~~ssGN~g~a 113 (388)
T 1v8z_A 39 LNYYLKTWAGRPTPLYYAKRLTEKIGGAKIYLKREDLVHGGAHKTNNAIGQALLAKFMGK-----TRLIAETGAGQHGVA 113 (388)
T ss_dssp HHHHHHHTTCCSCCEEECHHHHHHHTSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTC-----CEEEEEESSSHHHHH
T ss_pred HHHHHHHhcCCCCCceehHhhHhhcCCceEEEEeccCCCCCCHHHHHHHHHHHHHHHcCC-----CEEEEecCchHHHHH
Confidence 34455668876 99999999998776 899999999999999999999999998888876 3455 5899999999
Q ss_pred HHHHHHHcCCeEEEEecCC-CC--HHHHHHHHHcCCEEEEeCC-CCChhHHHHHHHH-HHHhCCCeEE-cCCCCCCcc--
Q 020805 85 LAFMAAAKQYRLIITMPAS-MS--LERRIILRAFGAELVLTDP-AKGMKGAVQKAEE-ILAKTPNAYM-LQQFENPAN-- 156 (321)
Q Consensus 85 lA~aa~~~G~~~~ivvp~~-~~--~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~-~~~~~~~~~~-~~~~~~~~~-- 156 (321)
+|++|+++|++|+||||+. .+ ..|+++++.+||+|+.++. ..+++++.+.+.+ ++++.++.+| ++++.|+.+
T Consensus 114 ~A~aa~~~G~~~~iv~p~~~~~~~~~~~~~~~~~GA~V~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~n~~p~~ 193 (388)
T 1v8z_A 114 TAMAGALLGMKVDIYMGAEDVERQKMNVFRMKLLGANVIPVNSGSRTLKDAINEALRDWVATFEYTHYLIGSVVGPHPYP 193 (388)
T ss_dssp HHHHHHHTTCEEEEEEEHHHHTTCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHH
T ss_pred HHHHHHHcCCcEEEEEcCCchhhhhhHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHhCCCceEecCCccCCCCch
Confidence 9999999999999999984 22 4678999999999999985 3467888877754 5666545444 566666543
Q ss_pred --hhhhhhchHHHHHhhh----CCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEecCCCCc--------cCCCCC-
Q 020805 157 --PKIHYETTGPELWKGS----GGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTESPV--------LSGGKP- 221 (321)
Q Consensus 157 --~~~g~~~~~~Ei~~ql----~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~--------~~~g~~- 221 (321)
+..||.|++.||++|+ +..||+||+|+|+||+++|++.+++ .+|.++||+|||+++.. +..+++
T Consensus 194 ~~~~~~~~t~~~Ei~~q~~~~~~~~~d~vvvpvG~GG~~aGi~~~~~-~~~~~~vigve~~~~~~~~~~~~~~l~~g~~~ 272 (388)
T 1v8z_A 194 TIVRDFQSVIGREAKAQILEAEGQLPDVIVACVGGGSNAMGIFYPFV-NDKKVKLVGVEAGGKGLESGKHSASLNAGQVG 272 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHGGGT-TCTTSEEEEEEEEETBGGGTBSCCHHHHCEEE
T ss_pred hHHHHHhHHHHHHHHHHHHHhcCCCCCEEEEecCccHhHHHHHHHHh-hCCCceEEEEccCccccchhhhhHHHhcCCce
Confidence 2348999999999999 4469999999999999999999998 48999999999998643 111211
Q ss_pred -------------------CCcccccccCCCC---cccccccccCEEEEeCHHHHHHHHHHHHHhcCCeEecchHHHHHH
Q 020805 222 -------------------GPHKIQGIGAGFV---PGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAA 279 (321)
Q Consensus 222 -------------------~~~~~~gl~~~~~---~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~Gi~~~pss~~a~aa 279 (321)
..+..+|+..... .+.+....+|+++.|+|+|+++++++|++++|++++|++|+++++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~tia~gl~~~~~g~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~egi~~~~~sa~a~a~ 352 (388)
T 1v8z_A 273 VFHGMLSYFLQDEEGQIKPTHSIAPGLDYPGVGPEHAYLKKIQRAEYVTVTDEEALKAFHELSRTEGIIPALESAHAVAY 352 (388)
T ss_dssp EETTEEEEECBCTTSCBCCCCCSSTTSCCSBCCHHHHHHHHTTSEEEEEEEHHHHHHHHHHHHHHHSCCBCHHHHHHHHH
T ss_pred eccccccccccccccccCCCceeeeccccCCCChhHHHHHhcCCcEEEEECHHHHHHHHHHHHHhcCCeecccHHHHHHH
Confidence 1122344433211 133445667999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCEEEEEecCCC-CCCHHHHHhh
Q 020805 280 AIEIAKRPENAGKLIVVCSQFAC-ITSDSWLIAI 312 (321)
Q Consensus 280 ~~~~~~~~~~~~~~vv~i~tgg~-~~~~~~~~~~ 312 (321)
+++++++. .++++||+|+||++ .+.+.+.+..
T Consensus 353 a~~l~~~~-~~~~~vv~i~tg~g~k~~~~~~~~~ 385 (388)
T 1v8z_A 353 AMKLAKEM-SRDEIIIVNLSGRGDKDLDIVLKVS 385 (388)
T ss_dssp HHHHHHTS-CTTCEEEEEECBBSGGGHHHHHHHH
T ss_pred HHHHHHhc-CCCCEEEEEECCCCccCHHHHHHHh
Confidence 99988763 47889999999976 6777766543
No 36
>1qop_B Tryptophan synthase beta chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.79.1.1 PDB: 1k7e_B* 1k7f_B* 1kfb_B* 1k3u_B* 1tjp_B* 1wbj_B* 2cli_B* 2clk_B* 2cll_B* 2j9x_B* 3cep_B* 1kfc_B* 1k8x_B* 1kfj_B* 1kfk_B* 2rh9_B* 2rhg_B* 2j9y_B* 1cw2_B* 1a5s_B* ...
Probab=100.00 E-value=5.9e-53 Score=398.61 Aligned_cols=297 Identities=21% Similarity=0.200 Sum_probs=237.4
Q ss_pred hhhhhhccC-CcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEe-eCCChHHHHHHH
Q 020805 10 KDVTELIGN-TPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIE-PTSGNTGIGLAF 87 (321)
Q Consensus 10 ~~i~~~~~~-TPL~~~~~l~~~~g~~v~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~-~SsGN~g~AlA~ 87 (321)
..+...+++ |||+++++|++.+|.+||+|+|++|||||||+|++.+++..+.++|. .++|+ +|+||||+|+|+
T Consensus 46 ~~~~~~ig~~TPL~~~~~l~~~~g~~i~lK~E~l~ptGSfK~R~a~~~~~~a~~~g~-----~~vi~e~ssGNhg~a~A~ 120 (396)
T 1qop_B 46 DLLKNYAGRPTALTKCQNITAGTRTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGK-----SEIIAETGAGQHGVASAL 120 (396)
T ss_dssp HHHHHTTCCSCCEEECHHHHTTSSEEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTC-----CEEEEEESSSHHHHHHHH
T ss_pred HHHHHhCCCCCCcEEhhhhhhccCCeEEEEeccCCCCCcHHHHHHHHHHHHHHHcCc-----CEEEEecCchHHHHHHHH
Confidence 345567875 99999999998889999999999999999999999999999988886 45666 899999999999
Q ss_pred HHHHcCCeEEEEecCC-CCH--HHHHHHHHcCCEEEEeCC-CCChhHHHHHHHHH-HHhCCCeEE-cCCCCCCc----ch
Q 020805 88 MAAAKQYRLIITMPAS-MSL--ERRIILRAFGAELVLTDP-AKGMKGAVQKAEEI-LAKTPNAYM-LQQFENPA----NP 157 (321)
Q Consensus 88 aa~~~G~~~~ivvp~~-~~~--~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~-~~~~~~~~~-~~~~~~~~----~~ 157 (321)
+|+++|++|+||||+. .+. .|+++++.+||+|+.++. ..+++++.+.+.+. +++.++.+| ++++.|+. ++
T Consensus 121 aa~~~G~~~~i~mp~~~~~~~~~~~~~~~~~GA~V~~v~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~n~~p~~~~v 200 (396)
T 1qop_B 121 ASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIV 200 (396)
T ss_dssp HHHHHTCEEEEEEEHHHHHHCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHH
T ss_pred HHHHCCCcEEEEEcCCchhhhhhHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHhccCCcEEEeCCcCCCCCchHHH
Confidence 9999999999999985 433 567899999999999984 44678888777754 665445554 45554443 22
Q ss_pred hhhhhchHHHHHhhh----CCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEecCCCCc--------cCCCCC----
Q 020805 158 KIHYETTGPELWKGS----GGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTESPV--------LSGGKP---- 221 (321)
Q Consensus 158 ~~g~~~~~~Ei~~ql----~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~--------~~~g~~---- 221 (321)
..||++++.||++|+ +..||+||+|+|+||+++|++.+++ .+|.++||+|||.++.. +..+.+
T Consensus 201 ~~g~~t~~~Ei~~Ql~~~~~~~~d~vvvpvG~GG~~~Gi~~~~~-~~~~~~vigVe~~~~~~~~~~~~~~l~~g~~~~~~ 279 (396)
T 1qop_B 201 REFQRMIGEETKAQILDKEGRLPDAVIACVGGGSNAIGMFADFI-NDTSVGLIGVEPGGHGIETGEHGAPLKHGRVGIYF 279 (396)
T ss_dssp HHTTTHHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHGGGT-TCTTSEEEEEEEEETBGGGTBSCCHHHHSEEEEET
T ss_pred HHHHhHHHHHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHHh-cCCCCEEEEEeCCCccccchhhHHHHHcCCeeeec
Confidence 348999999999999 5579999999999999999999998 48999999999998642 211221
Q ss_pred ----------------CCcccccccCCCC---cccccccccCEEEEeCHHHHHHHHHHHHHhcCCeEecchHHHHHHHHH
Q 020805 222 ----------------GPHKIQGIGAGFV---PGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIE 282 (321)
Q Consensus 222 ----------------~~~~~~gl~~~~~---~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~Gi~~~pss~~a~aa~~~ 282 (321)
..+..+||..+.+ .+.+.+..+|+++.|+|+|+++++++|++++|++++|++|++++++.+
T Consensus 280 g~~~~~~~~~~g~~~~~~tia~gl~~~~~g~~~~~l~~~~~~~~~~V~d~e~~~a~~~l~~~egi~~~~~sa~a~a~a~~ 359 (396)
T 1qop_B 280 GMKAPMMQTADGQIEESYSISAGLDFPSVGPQHAYLNSIGRADYVSITDDEALEAFKTLCRHEGIIPALESSHALAHALK 359 (396)
T ss_dssp EEEEEECBCTTSCBCCCCCSSGGGCCSSCCHHHHHHHHTTSSEEEEEEHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHH
T ss_pred cchhhhcccccCCcCCCceeeccCCCCCCCHHHHHHHhcCCeEEEEECHHHHHHHHHHHHHhcCCccccchHHHHHHHHH
Confidence 1223345543221 233456678999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCEEEEEecCCC-CCCHHHHHhh
Q 020805 283 IAKRPENAGKLIVVCSQFAC-ITSDSWLIAI 312 (321)
Q Consensus 283 ~~~~~~~~~~~vv~i~tgg~-~~~~~~~~~~ 312 (321)
+.++...++++||+++||++ ++.+.+.+..
T Consensus 360 l~~~~~~~~~~vv~i~tg~g~k~~~~~~~~~ 390 (396)
T 1qop_B 360 MMREQPEKEQLLVVNLSGRGDKDIFTVHDIL 390 (396)
T ss_dssp HHHHSTTSCEEEEEEECBBCGGGHHHHHHHC
T ss_pred HHHhcCCCCCeEEEEECCCCCCCHHHHHHHh
Confidence 87753226889999999974 7777776544
No 37
>1e5x_A Threonine synthase; threonine biosynthesis, PLP enzyme, S-adenosyl-methionine, allostery; 2.25A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 2c2b_A* 2c2g_A*
Probab=100.00 E-value=1.6e-52 Score=403.61 Aligned_cols=292 Identities=18% Similarity=0.146 Sum_probs=238.2
Q ss_pred hhhhccCCcceecccccCC-CC-ceEEEEeCCCCCCCchhhHHHHHHHHHHHH---cCCCCCCCeEEEeeCCChHHHHHH
Q 020805 12 VTELIGNTPLVYLNNIVNG-CV-ARIAAKLEMMEPCSSVKDRIGYSMISDAEA---KGLITPGESVLIEPTSGNTGIGLA 86 (321)
Q Consensus 12 i~~~~~~TPL~~~~~l~~~-~g-~~v~~K~E~~~ptGS~K~R~a~~~l~~a~~---~g~~~~g~~~vv~~SsGN~g~AlA 86 (321)
+...+|+|||+++++|++. +| .+||+|+|++|||||||||++.+++..+.+ ++. +..+|+++|+||||+|+|
T Consensus 124 v~l~~g~TPLv~l~~L~~~~lg~~~l~~K~E~~nPTGSFKDRga~~~~~~l~~~~~~~~---g~~~Vv~aSsGNtG~AlA 200 (486)
T 1e5x_A 124 VSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKR---PVVGVGCASTGDTSAALS 200 (486)
T ss_dssp CCCCCCCCCEEECHHHHHHHHCCSSEEEEETTSSTTSBTTHHHHHHHHHHHHHHHHTTC---CCCEEEECCCSHHHHHHH
T ss_pred ccccCCCCCcEECcccchhhcCCCcEEEeeccCCCccCHHHHHHHHHHHHHHHHHHcCC---CCeEEEEcCCCHHHHHHH
Confidence 4556889999999999877 66 489999999999999999999888766543 332 237899999999999999
Q ss_pred HHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhchH
Q 020805 87 FMAAAKQYRLIITMPAS-MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTG 165 (321)
Q Consensus 87 ~aa~~~G~~~~ivvp~~-~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 165 (321)
++|+++|++|+||+|++ ++..|+.+++.+||+|+.+++ +++++.+.+++++++. ++|+++++ |+.+ +.||.|++
T Consensus 201 ~~a~~~Gi~~~I~~P~~~~s~~k~~~~~~~GA~vi~v~g--~~dd~~~~a~~l~~~~-~~~~vns~-N~~~-i~gq~t~~ 275 (486)
T 1e5x_A 201 AYCASAGIPSIVFLPANKISMAQLVQPIANGAFVLSIDT--DFDGCMKLIREITAEL-PIYLANSL-NSLR-LEGQKTAA 275 (486)
T ss_dssp HHHHHHTCCEEEEEEGGGCCHHHHHHHHHTTCEEEEEES--CHHHHHHHHHHHHHHS-CEEEGGGS-HHHH-HHHHTHHH
T ss_pred HHHHHcCCeEEEEECCCCCCHHHHHHHHhCCCEEEEECC--CHHHHHHHHHHHHhcC-CEEEeCCC-CHHH-HHHHHHHH
Confidence 99999999999999996 999999999999999999996 4789999999998886 78899887 7877 68899999
Q ss_pred HHHHhhhCC-CCCEEEEecCCchhHHHHHHHHHhcC------CCcEEEEEecCCCCccC----CCC--C-----CCcccc
Q 020805 166 PELWKGSGG-RIDALVSGIGTGGTITGAGKFLKEKN------PNIKLYGIEPTESPVLS----GGK--P-----GPHKIQ 227 (321)
Q Consensus 166 ~Ei~~ql~~-~~d~vv~p~G~Gg~~aGi~~~~k~~~------~~~~vigv~~~~~~~~~----~g~--~-----~~~~~~ 227 (321)
+||++|+++ .||+||+|+|+||+++|++.+||+.. |.+++|+||+++++.+. .|. . ..+.++
T Consensus 276 ~Ei~~ql~~~~~D~vvvpvG~GG~i~Gi~~a~k~~~~~Gli~p~~rvi~Ve~~~~~~l~~~~~~G~~~~~~~~~~~t~a~ 355 (486)
T 1e5x_A 276 IEILQQFDWQVPDWVIVPGGNLGNIYAFYKGFKXCQELGLVDRIPRMVCAQAANANPLYLHYKSGWKDFKPMTASTTFAS 355 (486)
T ss_dssp HHHHHHTTSCCCSEEEEECSSTHHHHHHHHHHHHHHHTTSSSCCCEEEEEEETTSSTHHHHHHTTTTTCCC---------
T ss_pred HHHHHHcCCCCCCEEEEeCCcHHHHHHHHHHHHHhhhhccCCCCCEEEEEecCCCchHHHHHHcCCCccccCCCCCeeCc
Confidence 999999964 59999999999999999999998764 78999999999987653 342 1 234556
Q ss_pred cccCCCCccccc--ccccCE----EEEeCHHHHHHHHHHHHHhcCCeEecchHHHHHHHHHHHhcCC-CCCCEEEEEecC
Q 020805 228 GIGAGFVPGVLE--VNIIDE----VVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPE-NAGKLIVVCSQF 300 (321)
Q Consensus 228 gl~~~~~~~~~~--~~~~d~----~~~V~d~e~~~a~~~l~~~~Gi~~~pss~~a~aa~~~~~~~~~-~~~~~vv~i~tg 300 (321)
|++.+. |.+.. .+.+|+ ++.|+|+|++++++ +++++|+++||+||+++++++++++++. .++++||+++||
T Consensus 356 gi~i~~-p~~~~~~~~~~~~~~g~~~~Vsd~e~~~ai~-l~~~eGi~~ePssA~alaa~~~~~~~g~~~~~~~vV~i~Tg 433 (486)
T 1e5x_A 356 AIQIGD-PVSIDRAVYALKKCNGIVEEATEEELMDAMA-QADSTGMFICPHTGVALTALFKLRNQGVIAPTDRTVVVSTA 433 (486)
T ss_dssp --------CCCHHHHHHHHHTTCEEEEECHHHHHHHHH-HHHHTTCCCCHHHHHHHHHHHHHHHTTSSCTTCCEEEEECB
T ss_pred cccCCC-CccHHHHHHHHhccCCeEEEECHHHHHHHHH-HHHHCCeEEChhHHHHHHHHHHHHHhcCCCCCCeEEEEeCC
Confidence 665442 32222 223444 99999999999999 7788999999999999999999987654 467899999999
Q ss_pred CCCCCHHHHHhhc
Q 020805 301 ACITSDSWLIAIT 313 (321)
Q Consensus 301 g~~~~~~~~~~~~ 313 (321)
++..+.+.+..+.
T Consensus 434 ~~~k~~~~v~~~~ 446 (486)
T 1e5x_A 434 HGLKFTQSKIDYH 446 (486)
T ss_dssp CGGGGHHHHHHHH
T ss_pred CCccCHHHHHHHh
Confidence 9887777666543
No 38
>2o2e_A Tryptophan synthase beta chain; amino-acid biosynthesis, tryptophan biosynthesis, structural genomics; 2.20A {Mycobacterium tuberculosis} PDB: 2o2j_A
Probab=100.00 E-value=4.4e-51 Score=387.61 Aligned_cols=295 Identities=22% Similarity=0.232 Sum_probs=221.8
Q ss_pred hhhhccC-CcceecccccCCC-CceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHH
Q 020805 12 VTELIGN-TPLVYLNNIVNGC-VARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMA 89 (321)
Q Consensus 12 i~~~~~~-TPL~~~~~l~~~~-g~~v~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~AlA~aa 89 (321)
+..++++ |||+++++|++.+ +.+||+|+|++|||||||+|++.+++..+.+.|+ ...|+++|+||||+|+|++|
T Consensus 74 ~~~~~g~~TPL~~~~~Ls~~~gg~~i~lK~E~lnptGSfK~R~a~~~~~~a~~~g~----~~vI~~~ssGNhG~A~A~aa 149 (422)
T 2o2e_A 74 QANYAGRPSPLYEATRLSQHAGSARIFLKREDLNHTGSHKINNVLGQALLARRMGK----TRVIAETGAGQHGVATATAC 149 (422)
T ss_dssp TTTTSSCSCCEEECGGGGGGTTTCEEEEECGGGCCSSTTHHHHHHHHHHHHHHTTC----CEEEEEESSSHHHHHHHHHH
T ss_pred HHHhCCCCCCeEEChhhHhhcCCCeEEEEEcCCCCCCcHHHHHHHHHHHHHHHcCC----CeEEEecCccHHHHHHHHHH
Confidence 3556655 9999999999887 4899999999999999999999999999888876 24455789999999999999
Q ss_pred HHcCCeEEEEecCCCC---HHHHHHHHHcCCEEEEeCC-CCChhHHHHHHHH-HHHhCCCeEE-cCCCCCCc----chhh
Q 020805 90 AAKQYRLIITMPASMS---LERRIILRAFGAELVLTDP-AKGMKGAVQKAEE-ILAKTPNAYM-LQQFENPA----NPKI 159 (321)
Q Consensus 90 ~~~G~~~~ivvp~~~~---~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~-~~~~~~~~~~-~~~~~~~~----~~~~ 159 (321)
+++|++|+||||+... ..|+.+++.+||+|+.++. ..+++++.+.+.+ ++++.++.+| ++++.++. ++..
T Consensus 150 a~~G~~~~I~mp~~~~~~q~~kv~~~~~~GA~Vv~v~~~~~~~~da~~~a~~~~~~~~~~~~yi~~s~~g~~p~~~~v~~ 229 (422)
T 2o2e_A 150 ALLGLDCVIYMGGIDTARQALNVARMRLLGAEVVAVQTGSKTLKDAINEAFRDWVANADNTYYCFGTAAGPHPFPTMVRD 229 (422)
T ss_dssp HHHTCEEEEEEEHHHHHHSHHHHHHHHHTTCEEEEECSTTSCHHHHHHHHHHHHHHHTTTEEECCCCSSSCCCCHHHHHH
T ss_pred HHcCCcEEEEeCCCcchhhHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHhcCCCcEEEeCCccCCCCcHHHHHH
Confidence 9999999999998532 4678899999999999985 3467888877744 5666445555 45554332 2235
Q ss_pred hhhchHHHHHhhh----CCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEecCCCC--------ccCCCCCC-----
Q 020805 160 HYETTGPELWKGS----GGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTESP--------VLSGGKPG----- 222 (321)
Q Consensus 160 g~~~~~~Ei~~ql----~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~~~~~~--------~~~~g~~~----- 222 (321)
||.+++.||++|+ +..||+||+|+|+||+++|++.+++. .|.++||+|||.++. .+..|.+.
T Consensus 230 ~q~t~g~Ei~~Ql~~~~~~~pD~vvvpvG~GG~~~Gi~~~~~~-~p~v~vigVe~~g~~~~~~~~~~~l~~g~~~~~~g~ 308 (422)
T 2o2e_A 230 FQRIIGMEARVQIQGQAGRLPDAVVACVGGGSNAIGIFHAFLD-DPGVRLVGFEAAGDGVETGRHAATFTAGSPGAFHGS 308 (422)
T ss_dssp HTTHHHHHHHHHHHHHSSSCCSEEEEEGGGHHHHHTTSGGGTT-CTTCEEEEEEECC-----------------------
T ss_pred HHHHHHHHHHHHHHHhhCCCCCEEEEccCCchhHHHHHHHHhc-CCCCeEEEEecCCCcccchhHHHHHHcCCceecccc
Confidence 8999999999997 34599999999999999999888764 789999999999872 23223221
Q ss_pred ---------------CcccccccCCC---CcccccccccCEEEEeCHHHHHHHHHHHHHhcCCeEecchHHHHHHHHHHH
Q 020805 223 ---------------PHKIQGIGAGF---VPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIA 284 (321)
Q Consensus 223 ---------------~~~~~gl~~~~---~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~Gi~~~pss~~a~aa~~~~~ 284 (321)
.+..+||..+. ..+.+....+|+++.|+|+|+++++++|++.+||++++++|++++++++++
T Consensus 309 ~~~~~~~~~g~~~~~~tia~gl~~~~~g~~~~~l~~~~~~~~~~Vsd~e~~~a~~~l~~~eGi~~~~esa~A~a~a~~l~ 388 (422)
T 2o2e_A 309 FSYLLQDEDGQTIESHSISAGLDYPGVGPEHAWLKEAGRVDYRPITDSEAMDAFGLLCRMEGIIPAIESAHAVAGALKLG 388 (422)
T ss_dssp --------------------------------------CCEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_pred chhhcccccccccCCceeecccCCCCCCHHHHHHHHhCCeeEEEECHHHHHHHHHHHHHHcCCccCchHHHHHHHHHHHH
Confidence 11223443211 123345566799999999999999999999999999999999999999887
Q ss_pred hcCCCCCCEEEEEecCCC-CCCHHHHHhh
Q 020805 285 KRPENAGKLIVVCSQFAC-ITSDSWLIAI 312 (321)
Q Consensus 285 ~~~~~~~~~vv~i~tgg~-~~~~~~~~~~ 312 (321)
++. .++++||+++||++ ++.+.+.+..
T Consensus 389 ~~~-~~~~~vvvilsG~g~kd~~~~~~~~ 416 (422)
T 2o2e_A 389 VEL-GRGAVIVVNLSGRGDKDVETAAKWF 416 (422)
T ss_dssp HHH-CTTCEEEEECCSCSSSHHHHHHHHC
T ss_pred Hhc-CCCCEEEEEeCCCCCCCHHHHHHHH
Confidence 653 36889999999965 7777665543
No 39
>1vb3_A Threonine synthase; PLP-dependent enzyme, lyase; HET: KPA; 2.20A {Escherichia coli} SCOP: c.79.1.1
Probab=100.00 E-value=7.4e-45 Score=345.66 Aligned_cols=271 Identities=14% Similarity=0.087 Sum_probs=215.9
Q ss_pred cCCcceecccccCCCCceEEEEeCCC-CCCCchhhHHHHHHH---HHHHHcCCCCCCCeEEEeeCCChHHHHHH-HHHHH
Q 020805 17 GNTPLVYLNNIVNGCVARIAAKLEMM-EPCSSVKDRIGYSMI---SDAEAKGLITPGESVLIEPTSGNTGIGLA-FMAAA 91 (321)
Q Consensus 17 ~~TPL~~~~~l~~~~g~~v~~K~E~~-~ptGS~K~R~a~~~l---~~a~~~g~~~~g~~~vv~~SsGN~g~AlA-~aa~~ 91 (321)
++|||+++++ +||+ +|++ |||||||||++.+++ .++ +++. ..+|+++||||||+|+| .+|++
T Consensus 82 ~~TPL~~l~~-------~i~~-~E~~~~pTgSfKdr~a~~l~~~l~~a-~~~~----~~~Iv~atsGNtG~A~A~~~a~~ 148 (428)
T 1vb3_A 82 FPAPVANVES-------DVGC-LELFHGPTLAFKDFGGRFMAQMLTHI-AGDK----PVTILTATSGDTGAAVAHAFYGL 148 (428)
T ss_dssp SCCCEEEEET-------TEEE-EECCCSTTSBTHHHHHHHHHHHHHHH-TTTC----CEEEEEECSSSHHHHHHHHTTTC
T ss_pred CCCCeEEecC-------CeEE-eeccCCCcccHHHHHHHHHHHHHHHH-HhcC----CCEEEecCCchHHHHHHHHHhhh
Confidence 7899999874 7999 6777 699999999999884 445 2332 47899999999999999 59999
Q ss_pred cCCeEEEEecC-CCCHHHHHHHHHcCCEE--EEeCCCCChhHHHHHHHHHHHh-----CCCeEEcCCCCCCcchhhhhhc
Q 020805 92 KQYRLIITMPA-SMSLERRIILRAFGAEL--VLTDPAKGMKGAVQKAEEILAK-----TPNAYMLQQFENPANPKIHYET 163 (321)
Q Consensus 92 ~G~~~~ivvp~-~~~~~~~~~~~~~Ga~v--~~~~~~~~~~~~~~~a~~~~~~-----~~~~~~~~~~~~~~~~~~g~~~ 163 (321)
+|++|+||||+ +++..|+++|+.+||+| +.+++ +++++.+.++++.++ ..++++++++ ||.+ +.||.+
T Consensus 149 ~G~~~~I~~P~~~~s~~k~~~m~~~GA~V~~v~v~g--~~d~~~~~~~~~~~d~~~~~~~~~~~~n~~-n~~~-~~gq~t 224 (428)
T 1vb3_A 149 PNVKVVILYPRGKISPLQEKLFCTLGGNIETVAIDG--DFDACQALVKQAFDDEELKVALGLNSANSI-NISR-LLAQIC 224 (428)
T ss_dssp TTEEEEEEEETTCSCHHHHHHHHSCCTTEEEEEEES--CHHHHHHHHHHGGGCHHHHHHHTEECCSTT-SHHH-HHHTTH
T ss_pred cCCeEEEEECCCCCCHHHHHHHHhcCCeEEEEEeCC--CHHHHHHHHHHHHhchhhhhhcCeeeCCCC-CHHH-HHHHHH
Confidence 99999999999 59999999999999999 55554 678898888887642 1256666664 6666 689999
Q ss_pred hHHHHHhhhCC---CCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEecCCCCcc----CCCCCC-----CcccccccC
Q 020805 164 TGPELWKGSGG---RIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTESPVL----SGGKPG-----PHKIQGIGA 231 (321)
Q Consensus 164 ~~~Ei~~ql~~---~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~~----~~g~~~-----~~~~~gl~~ 231 (321)
++.||++|+.+ .+|+||+|+|+||+++|++.+++...|.+++|+|++.+. .+ ..|... .+..+|+..
T Consensus 225 ~~~Ei~~ql~~~g~~~d~vvvpvG~GG~i~G~~~a~~~g~p~~kii~a~~~~~-~l~~~~~~G~~~~~~~~~tis~g~~i 303 (428)
T 1vb3_A 225 YYFEAVAQLPQETRNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVND-TVPRFLHDGQWSPKATQATLSNAMDV 303 (428)
T ss_dssp HHHHHHTTSCTTTTTSEEEEEECSSCHHHHHHHHHHHTTCCCSEEEEEECSCC-HHHHHHHHSCCCCCCCCCCSSGGGCC
T ss_pred HHHHHHHHcccccCCCCEEEEeCCchHHHHHHHHHHHcCCCCCeEEeecCCCh-HHHHHHHcCCcccCCCCCcccchhcC
Confidence 99999999964 599999999999999999999998788889999998763 33 233321 233455543
Q ss_pred CCCccccc------ccc-----cCEEEEeCHHHHHHHHHHHHHhcCCeEecchHHHHHHHHHHHhcCCCCCCEEEEEecC
Q 020805 232 GFVPGVLE------VNI-----IDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVVCSQF 300 (321)
Q Consensus 232 ~~~~~~~~------~~~-----~d~~~~V~d~e~~~a~~~l~~~~Gi~~~pss~~a~aa~~~~~~~~~~~~~~vv~i~tg 300 (321)
. .|.++. .+. .++++.|+|+|+++++++| +++|+++||+||+++++++++.+ ++++||+++||
T Consensus 304 ~-~p~~~~~~~~l~~~~~~~~~~~~~~~Vsd~e~~~a~~~l-~~eGi~~~p~sa~a~aa~~~~~~----~~~~vV~i~tg 377 (428)
T 1vb3_A 304 S-QPNNWPRVEELFRRKIWQLKELGYAAVDDETTQQTMREL-KELGYTSEPHAAVAYRALRDQLN----PGEYGLFLGTA 377 (428)
T ss_dssp S-SCTTHHHHHHHHHHTTCCGGGSEEEECCHHHHHHHHHHH-HHTTCCCCHHHHHHHHHHHTTCC----TTCEEEEEECB
T ss_pred C-CCccHHHHHHHHhcchhhhhCcEEEEECHHHHHHHHHHH-HHCCeEECchHHHHHHHHHHHhC----CCCcEEEEeCC
Confidence 3 233322 222 6799999999999999999 99999999999999999987653 57899999999
Q ss_pred CCCCCHHHHHh
Q 020805 301 ACITSDSWLIA 311 (321)
Q Consensus 301 g~~~~~~~~~~ 311 (321)
++..+.+-...
T Consensus 378 ~~~K~~~~v~~ 388 (428)
T 1vb3_A 378 HPAKFKESVEA 388 (428)
T ss_dssp CGGGGHHHHHH
T ss_pred CCCCCHHHHHH
Confidence 87655444443
No 40
>1kl7_A Threonine synthase; threonine synthesis, pyridoxal 5-phosphate, beta-family, MON lyase; HET: PLP; 2.70A {Saccharomyces cerevisiae} SCOP: c.79.1.1
Probab=100.00 E-value=1.2e-41 Score=328.11 Aligned_cols=286 Identities=14% Similarity=0.028 Sum_probs=212.1
Q ss_pred hccCCccee--cccccCCCCceEEEEeCCCCCCCchhhHHHHHHH---HHHH-HcCC-----CCCCCeEEEeeCCChHHH
Q 020805 15 LIGNTPLVY--LNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMI---SDAE-AKGL-----ITPGESVLIEPTSGNTGI 83 (321)
Q Consensus 15 ~~~~TPL~~--~~~l~~~~g~~v~~K~E~~~ptGS~K~R~a~~~l---~~a~-~~g~-----~~~g~~~vv~~SsGN~g~ 83 (321)
..+.|||++ ++++ .+||+|.|++|||||||||++.+++ .+++ ++|. +.++ .+|+++||||||.
T Consensus 93 ~~g~TPLv~~~l~~l-----~~l~~K~e~~nPTgSFKDrga~~~~~~~~~a~~~~g~~~~~~~~~~-~~Iv~ATSGNtG~ 166 (514)
T 1kl7_A 93 SDEVTPLVQNVTGDK-----ENLHILELFHGPTYAFKDVALQFVGNLFEYFLQRTNANLPEGEKKQ-ITVVGATSGDTGS 166 (514)
T ss_dssp STTSSCEECCTTCSS-----SCEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHHHHTTSCSSSCCC-EEEEEECSSSHHH
T ss_pred CCCCCceeehhcccc-----cchhhhhhccCCCCcHHHHHHHHHHHHHHHHHHhcCCccccccCCC-CEEEECCCCcHHH
Confidence 377899999 7765 4799999999999999999999884 4443 3452 3333 7899999999999
Q ss_pred HHHHHH--HHcCCeEEEEecCC-CCHHHHHHHH---HcCCEEEEeCCCCChhHHHHHHHHHHHhCC--CeEEcCCCCCCc
Q 020805 84 GLAFMA--AAKQYRLIITMPAS-MSLERRIILR---AFGAELVLTDPAKGMKGAVQKAEEILAKTP--NAYMLQQFENPA 155 (321)
Q Consensus 84 AlA~aa--~~~G~~~~ivvp~~-~~~~~~~~~~---~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~--~~~~~~~~~~~~ 155 (321)
| |++| ++.|++|+|++|++ +++.++.++. .+|++++.+++ +++++.+.+++++++.+ +.+.+ ++.|+.
T Consensus 167 A-A~~a~a~~~Gi~~~I~~P~~~~S~~q~~qm~~~~g~~~~vv~v~g--~fdda~~~vk~l~~~~~~~~~~~~-~~~Ns~ 242 (514)
T 1kl7_A 167 A-AIYGLRGKKDVSVFILYPTGRISPIQEEQMTTVPDENVQTLSVTG--TFDNCQDIVKAIFGDKEFNSKHNV-GAVNSI 242 (514)
T ss_dssp H-HHHHHTTCTTEEEEEEEETTSSCHHHHHHHHHCCCTTEEEEEESS--CHHHHHHHHHHHHHCSSCC--CCB-CCCCSC
T ss_pred H-HHHHHHhhcCCeEEEEEcCCCCCHHHHHHHhhhcCCCEEEEEcCC--CHHHHHHHHHHHHhccccccccee-EeeCCC
Confidence 9 5555 89999999999997 8887766663 34556666664 68999999999987742 11111 234444
Q ss_pred ch--hhhhhchHHHHHhhh-C---CCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEecCCCCccC----CCCCC---
Q 020805 156 NP--KIHYETTGPELWKGS-G---GRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTESPVLS----GGKPG--- 222 (321)
Q Consensus 156 ~~--~~g~~~~~~Ei~~ql-~---~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~~~----~g~~~--- 222 (321)
|| +.||.+.++|+++|+ + +.+|+||+|+|+||++.|++.+.+...|.+|+|+||++++ ++. .|...
T Consensus 243 N~~ri~gQ~tyy~e~~~ql~~~~~~~~d~~vvP~GngG~i~a~~~ak~~G~p~~rli~v~~~n~-~l~~~~~~G~~~~~~ 321 (514)
T 1kl7_A 243 NWARILAQMTYYFYSFFQATNGKDSKKVKFVVPSGNFGDILAGYFAKKMGLPIEKLAIATNEND-ILDRFLKSGLYERSD 321 (514)
T ss_dssp CHHHHHHHHHHHHHHHHHHHSSSSCCCEEEEEECSSSHHHHHHHHHHHHTCCCCCEEEEECSCC-HHHHHHHHSEEECCS
T ss_pred CHhHHhhHHHHHHHHHHHHhhhcCCCCcEEEEECCchHHHHHHHHHHHcCCCCCEEEEEeCCcc-hHHHHHhcCCccCCC
Confidence 43 579999999999998 4 3589999999999999998875555468889999999994 432 23211
Q ss_pred ---CcccccccCCCCcccccc---cccC------------------------------------------EEEEeCHHHH
Q 020805 223 ---PHKIQGIGAGFVPGVLEV---NIID------------------------------------------EVVQVSSDEA 254 (321)
Q Consensus 223 ---~~~~~gl~~~~~~~~~~~---~~~d------------------------------------------~~~~V~d~e~ 254 (321)
.+..+++... .|.++.+ ...| ..+.|+|+|+
T Consensus 322 ~~~~Tis~amdi~-~psn~er~l~~l~~~~~~~~~~~~d~~~v~~~~~~l~~~gg~~~~~~~~~~~~~~f~~~~Vsd~e~ 400 (514)
T 1kl7_A 322 KVAATLSPAMDIL-ISSNFERLLWYLAREYLANGDDLKAGEIVNNWFQELKTNGKFQVDKSIIEGASKDFTSERVSNEET 400 (514)
T ss_dssp SCCCCSCGGGCCS-SCTTHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHSEEECCHHHHHHHTTTEEEEECCHHHH
T ss_pred CCCCeechhhhcC-CCCcHHHHHHHHhccccccccccccHHHHHHHHHHHHhcCCeeccHHHHHHhhcCceEEEECHHHH
Confidence 1222333222 3444331 1122 4899999999
Q ss_pred HHHHHHHHHhc----CCeEecchHHHHHHHHHHHhcCCCCCCEEEEEecCCCCCCHHHHHhh
Q 020805 255 IETAKLLALKE----GLFVGISSGGAAAAAIEIAKRPENAGKLIVVCSQFACITSDSWLIAI 312 (321)
Q Consensus 255 ~~a~~~l~~~~----Gi~~~pss~~a~aa~~~~~~~~~~~~~~vv~i~tgg~~~~~~~~~~~ 312 (321)
+++++++++++ |+++||+||++++++.++.+++..+++++|++.|+....+.+.++..
T Consensus 401 ~~ai~~l~~~~~~~~G~~~ep~tAv~~aa~~~~~~~g~~~~~~vV~l~Ta~~~Kf~~~v~~a 462 (514)
T 1kl7_A 401 SETIKKIYESSVNPKHYILDPHTAVGVCATERLIAKDNDKSIQYISLSTAHPAKFADAVNNA 462 (514)
T ss_dssp HHHHHHHHHHCCSSTTCCCCHHHHHHHHHHHHHHHHHCCTTSEEEEEECBCGGGGHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCEEEcccHHHHHHHHHHHHHhccCCCCcEEEEECCchhhhHHHHHHH
Confidence 99999999999 99999999999999999886532357799999999766555555443
No 41
>4f4f_A Threonine synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.90A {Brucella melitensis BV}
Probab=100.00 E-value=2.8e-41 Score=321.77 Aligned_cols=272 Identities=16% Similarity=0.097 Sum_probs=212.0
Q ss_pred CCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHH---HHHHH-HcCCCCCCCeEEEeeCCChHHHH-HHHHHHHc
Q 020805 18 NTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSM---ISDAE-AKGLITPGESVLIEPTSGNTGIG-LAFMAAAK 92 (321)
Q Consensus 18 ~TPL~~~~~l~~~~g~~v~~K~E~~~ptGS~K~R~a~~~---l~~a~-~~g~~~~g~~~vv~~SsGN~g~A-lA~aa~~~ 92 (321)
.|||+++. .++|+|.|++|||||||||++.++ +..+. ++|. ..+|+++||||||++ +|++|+++
T Consensus 93 ~~pl~~l~-------~~~~~kee~~~PTgSFKDRga~~~~~~l~~a~~~~g~----~~~Vv~ASSGNtG~aa~aa~a~~~ 161 (468)
T 4f4f_A 93 VCPLVQTD-------ANEFVLELFHGPTLAFKDVAMQLLARMMDYVLAQRGE----RATIVGATSGDTGGAAIEAFGGRD 161 (468)
T ss_dssp SSCEEEEE-------TTEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHHTTC----CEEEEEECSSHHHHHHHHHHTTCS
T ss_pred CCceEEec-------CCeehHHhccCCcccHHHHHHHHHHHHHHHHHHhcCC----CcEEEEECCchHHHHHHHHHHhcc
Confidence 38999875 269999999999999999999998 67764 5554 258999999999955 56669999
Q ss_pred CCeEEEEecCC-CCHHHHHHHHHcCC-EE--EEeCCCCChhHHHHHHHHHHHhCC-----CeEEcCCCCCCcchhhhhhc
Q 020805 93 QYRLIITMPAS-MSLERRIILRAFGA-EL--VLTDPAKGMKGAVQKAEEILAKTP-----NAYMLQQFENPANPKIHYET 163 (321)
Q Consensus 93 G~~~~ivvp~~-~~~~~~~~~~~~Ga-~v--~~~~~~~~~~~~~~~a~~~~~~~~-----~~~~~~~~~~~~~~~~g~~~ 163 (321)
|++|+|+||++ +++.|+.+++.+|+ +| +.+++ +++++.+.+++++++.+ +++++++ .||.. +.||.|
T Consensus 162 Gi~~~I~~P~~~~s~~k~~~~~~~gganV~vv~v~g--~fdda~~~~k~~~~d~~~~~~~~~~~vns-in~~r-i~GQ~T 237 (468)
T 4f4f_A 162 NTDIFILFPNGRVSPVQQRQMTSSGFSNVHALSIEG--NFDDCQNLVKGMFNDLEFCDALSLSGVNS-INWAR-IMPQVV 237 (468)
T ss_dssp SEEEEEEEETTCSCHHHHHHHHCSCCTTEEEEEEES--CHHHHHHHHHHHHHCHHHHHHHTEEECCT-TSHHH-HGGGHH
T ss_pred CCcEEEEeCCCCCCHHHHHHHHhcCCCeEEEeecCC--CHHHHHHHHHHHHhccccccccceEeCCC-CCHHH-HHhHHH
Confidence 99999999998 99999999999974 55 56664 68999999998876531 4667776 46766 789999
Q ss_pred hHHHHHhhhCCCCCE---EEEecCCchhHHHHHHHHHhcCCCcEEEEEecCCCCccC----CCCC-----CCcccccccC
Q 020805 164 TGPELWKGSGGRIDA---LVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTESPVLS----GGKP-----GPHKIQGIGA 231 (321)
Q Consensus 164 ~~~Ei~~ql~~~~d~---vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~~~----~g~~-----~~~~~~gl~~ 231 (321)
+++||++|++ .+|. |+||+|+||+++|++.+.+...|..|+|+| +.+++++. .|+. ..+..+++..
T Consensus 238 ~~~Ei~~ql~-~~d~~v~vvVPvG~GG~i~g~~~Ak~mGlPi~kli~a-~n~~~~l~~~l~~G~~~~~~~~~Tia~smdi 315 (468)
T 4f4f_A 238 YYFTAALSLG-APDRAVSFTVPTGNFGDIFAGYVAKRMGLPIEQLIIA-TNDNDILSRTLESGAYEMRGVAQTTSPSMDI 315 (468)
T ss_dssp HHHHHHHHTT-TTSSCEEEEEECSSSHHHHHHHHHHHHTCCEEEEEEE-ECSCCHHHHHHHHSEEECCCCCCCSCGGGCC
T ss_pred HHHHHHHhcc-cCCCCeEEEEEeCCcHHHHHHHHHHHhCCCCCEEEEE-eCCchHHHHHHHcCCceecCCcceeCchhhc
Confidence 9999999994 7898 999999999999999885544577899999 77776543 2322 1223344433
Q ss_pred CCCcccccc----------------------------------cc--cCEEEEeCHHHHHHHHHHHHHhcCCeEecchHH
Q 020805 232 GFVPGVLEV----------------------------------NI--IDEVVQVSSDEAIETAKLLALKEGLFVGISSGG 275 (321)
Q Consensus 232 ~~~~~~~~~----------------------------------~~--~d~~~~V~d~e~~~a~~~l~~~~Gi~~~pss~~ 275 (321)
. .|.++.+ .. ....+.|+|+|+.++++++++++|+++||+||+
T Consensus 316 ~-~~sN~erl~~~l~~~d~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~VsD~ei~~ai~~l~~~~g~~vEP~~Av 394 (468)
T 4f4f_A 316 Q-ISSNFERLLFEAHGRDAAAVRGLMQGLKQSGGFTISEKPLSAIRSEFSAGRSTVDETAATIESVLSKDGYLLDPHSAI 394 (468)
T ss_dssp S-SCTTHHHHHHHHTTTCHHHHHHHHHHHHHHSEEECCHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHSCCCCHHHHH
T ss_pred C-ccchHHHHHHHHhccCHHHHHHHHHHHHhcCCeeccHHHHHHHhhcceEEEECHHHHHHHHHHHHHHCCEEECHhHHH
Confidence 2 1222110 00 113789999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEecCCCCCCHHHHHh
Q 020805 276 AAAAAIEIAKRPENAGKLIVVCSQFACITSDSWLIA 311 (321)
Q Consensus 276 a~aa~~~~~~~~~~~~~~vv~i~tgg~~~~~~~~~~ 311 (321)
+++++.++. .+++++|++.||....+.+.++.
T Consensus 395 a~aa~~~~~----~~~~~~V~l~Ta~~~Kf~~~v~~ 426 (468)
T 4f4f_A 395 GVKVAREKA----SGTAPMVVLATAHPAKFPDAVKA 426 (468)
T ss_dssp HHHHHHHHC----CSSSCEEEEECBCGGGSHHHHHH
T ss_pred HHHHHHHHh----CCCCeEEEEecCCccccHHHHHH
Confidence 999998863 25678999999987666655554
No 42
>3v7n_A Threonine synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; 1.40A {Burkholderia thailandensis}
Probab=100.00 E-value=9e-39 Score=304.58 Aligned_cols=277 Identities=14% Similarity=0.051 Sum_probs=208.0
Q ss_pred CcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHH---HHHHH-HcCCCCCCCeEEEeeCCChHHHHHHHHHH-HcC
Q 020805 19 TPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSM---ISDAE-AKGLITPGESVLIEPTSGNTGIGLAFMAA-AKQ 93 (321)
Q Consensus 19 TPL~~~~~l~~~~g~~v~~K~E~~~ptGS~K~R~a~~~---l~~a~-~~g~~~~g~~~vv~~SsGN~g~AlA~aa~-~~G 93 (321)
|||+++..- -+.++|+|.|++|||||||||++.++ +..+. ++|. ..+|+++||||||.|+|++++ +.|
T Consensus 103 ~Pl~~l~~~---~~~~l~vkee~~~PTgSFKDRga~~~~~ll~~a~~~~g~----~~~Vv~ASSGNtG~Aaa~a~~~~~G 175 (487)
T 3v7n_A 103 TPLTTLGTE---NGAPVSLLELSNGPTLAFKDMAMQLLGNLFEYTLAKHGE----TLNILGATSGDTGSAAEYAMRGKEG 175 (487)
T ss_dssp SCEEEEEEE---TTEEEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHTTTC----CEEEEEECSSHHHHHHHHHHTTCTT
T ss_pred ceeEEecCC---CCcceeHHhhccCCcCcHHHHHHHHHHHHHHHHHHhcCC----CcEEEEeCChHHHHHHHHHHHhccC
Confidence 799887521 01239999999999999999999998 77775 4554 256999999999999887876 899
Q ss_pred CeEEEEecCC-CCHHHHHHHHHcCC---EEEEeCCCCChhHHHHHHHHHHHhC-----CCeEEcCCCCCCcchhhhhhch
Q 020805 94 YRLIITMPAS-MSLERRIILRAFGA---ELVLTDPAKGMKGAVQKAEEILAKT-----PNAYMLQQFENPANPKIHYETT 164 (321)
Q Consensus 94 ~~~~ivvp~~-~~~~~~~~~~~~Ga---~v~~~~~~~~~~~~~~~a~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~ 164 (321)
++|+|++|++ +++.|+++|+.+|+ +++.+++ +++++.+.++++.++. -+.++++++ ||.. +.|+.++
T Consensus 176 i~~~I~~P~~~~s~~k~~qm~~~Ga~nv~vv~v~G--~fDda~~~vk~~~~d~~~~~~~~l~~vns~-Np~r-i~gQ~ty 251 (487)
T 3v7n_A 176 VRVFMLSPHKKMSAFQTAQMYSLQDPNIFNLAVNG--VFDDCQDIVKAVSNDHAFKAQQKIGTVNSI-NWAR-VVAQVVY 251 (487)
T ss_dssp EEEEEEEETTCSCHHHHHHHHTCCCTTEEEEEEES--CHHHHHHHHHHHHTCHHHHHHTTEECCSTT-CHHH-HHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHhcCCCcEEEEEECC--CHHHHHHHHHHhhhchHHHhhcCeeeeCCC-CHHH-HHhHHHH
Confidence 9999999997 99999999999998 6777775 5899999998887631 156777775 6666 7899988
Q ss_pred HHHHHhhhC---CCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEecCCCCccC----CCCCC-----Ccc---cccc
Q 020805 165 GPELWKGSG---GRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTESPVLS----GGKPG-----PHK---IQGI 229 (321)
Q Consensus 165 ~~Ei~~ql~---~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~~~----~g~~~-----~~~---~~gl 229 (321)
++|+..|+. +.+|+|++|+|+||+++|++.+.+...|..|+|++++++ +.+. .|... .+. .+++
T Consensus 252 y~~~~~el~~~~~~~d~vvVP~GngG~i~g~~~A~~mGlp~~rli~a~~~n-~~l~~~~~~G~~~~~~~~~Ti~t~s~sm 330 (487)
T 3v7n_A 252 YFKGYFAATRSNDERVSFTVPSGNFGNVCAGHIARMMGLPIEKLVVATNEN-DVLDEFFRTGAYRVRSAQDTYHTSSPSM 330 (487)
T ss_dssp HHHHHHHTCSSTTCCEEEEEGGGCHHHHHHHHHHHHTTCCEEEEEEECTTC-HHHHHHHHHSEEEC--------------
T ss_pred HHHHHHHHHhcCCCCcEEEEecCchHHHHHHHHHHHcCCCCceEEEEeCCC-cHHHHHHHcCCcccCCCCCccccCCchh
Confidence 888888873 359999999999999999998866555777999999998 4432 23321 111 2232
Q ss_pred cCCCCcccccc---c-----------------------------------ccCEEEEeCHHHHHHHHHHHHHhcCCeEec
Q 020805 230 GAGFVPGVLEV---N-----------------------------------IIDEVVQVSSDEAIETAKLLALKEGLFVGI 271 (321)
Q Consensus 230 ~~~~~~~~~~~---~-----------------------------------~~d~~~~V~d~e~~~a~~~l~~~~Gi~~~p 271 (321)
... .|.++.+ . .....+.|+|+|+.++++++++++|+++||
T Consensus 331 dI~-~psn~er~l~~l~~~d~~~~~~~m~~l~~~g~~~l~~~~~~~~~~~~~~~~~~VsDee~~~air~l~~~~G~l~dP 409 (487)
T 3v7n_A 331 DIS-KASNFERFVFDLLGRDPARVVQLFRDVEQKGGFDLAASGDFARVAEFGFVSGRSTHADRIATIRDVFERYRTMIDT 409 (487)
T ss_dssp -----CHHHHHHHHHHTTTCHHHHHHHHHHHHHHSEEETTTTTCTHHHHHTTEEEECCCHHHHHHHHHHHHHHSCCCCCH
T ss_pred ccC-CCccHHHHHHHHhCCCHHHHHHHHHHHHhcCCeecccchhHHHHHhhcceEEEECHHHHHHHHHHHHHHcCEEECh
Confidence 222 1222110 0 012457899999999999999999999999
Q ss_pred chHHHHHHHHHHHhcCCCCCCEEEEEecCCCCC-CHHHHHhh
Q 020805 272 SSGGAAAAAIEIAKRPENAGKLIVVCSQFACIT-SDSWLIAI 312 (321)
Q Consensus 272 ss~~a~aa~~~~~~~~~~~~~~vv~i~tgg~~~-~~~~~~~~ 312 (321)
+||++++++.++.+ ++.++|++.|+.... ++...+..
T Consensus 410 htAva~aaa~~~~~----~~~~~V~l~Ta~p~Kf~~~v~~a~ 447 (487)
T 3v7n_A 410 HTADGLKVAREHLR----PGVPMVVLETAQPIKFGESIREAL 447 (487)
T ss_dssp HHHHHHHHHTTSCC----TTSCEEEEECBCGGGGHHHHHHHH
T ss_pred hHHHHHHHHHHhhC----CCCcEEEEecCCccccHHHHHHHh
Confidence 99999999877542 467899999996554 44554443
No 43
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.91 E-value=0.42 Score=36.92 Aligned_cols=97 Identities=22% Similarity=0.158 Sum_probs=66.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 150 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 150 (321)
..++....|..|..+|...+..|++++++-. .+.+.+.++..|..++.-+... .
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~---~~~~~~~~~~~g~~~i~gd~~~--~--------------------- 61 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIET---SRTRVDELRERGVRAVLGNAAN--E--------------------- 61 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEES---CHHHHHHHHHTTCEEEESCTTS--H---------------------
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEEC---CHHHHHHHHHcCCCEEECCCCC--H---------------------
Confidence 3477778899999999999999999888844 4567777777787765544321 1
Q ss_pred CCCCcchhhhhhchHHHHHhhhC-CCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEe
Q 020805 151 FENPANPKIHYETTGPELWKGSG-GRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIE 209 (321)
Q Consensus 151 ~~~~~~~~~g~~~~~~Ei~~ql~-~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~ 209 (321)
+++++.+ .+.|.++++++.-....-+...++..+|..++|+..
T Consensus 62 ----------------~~l~~a~i~~ad~vi~~~~~~~~n~~~~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 62 ----------------EIMQLAHLECAKWLILTIPNGYEAGEIVASARAKNPDIEIIARA 105 (140)
T ss_dssp ----------------HHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHHCSSSEEEEEE
T ss_pred ----------------HHHHhcCcccCCEEEEECCChHHHHHHHHHHHHHCCCCeEEEEE
Confidence 1111111 246888888887655555566777788888887755
No 44
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=91.00 E-value=2.2 Score=35.01 Aligned_cols=77 Identities=18% Similarity=0.261 Sum_probs=57.6
Q ss_pred CCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe-------cC--CCCHHHHHHHH
Q 020805 43 EPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITM-------PA--SMSLERRIILR 113 (321)
Q Consensus 43 ~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivv-------p~--~~~~~~~~~~~ 113 (321)
+|.--+=+..+...+.+|.+.|. ...||..|+|.++..++-.. -|++.++|. |. ..+++..+.++
T Consensus 22 ~~G~eNT~~tl~la~era~e~~I----k~iVVAS~sG~TA~k~~e~~--~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~ 95 (201)
T 1vp8_A 22 KPGRENTEETLRLAVERAKELGI----KHLVVASSYGDTAMKALEMA--EGLEVVVVTYHTGFVREGENTMPPEVEEELR 95 (201)
T ss_dssp SCSGGGHHHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHHHC--TTCEEEEEECCTTSSSTTCCSSCHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHcCC----CEEEEEeCCChHHHHHHHHh--cCCeEEEEeCcCCCCCCCCCcCCHHHHHHHH
Confidence 45556677788888889999885 25555556699886655533 789999998 43 45889999999
Q ss_pred HcCCEEEEeCCC
Q 020805 114 AFGAELVLTDPA 125 (321)
Q Consensus 114 ~~Ga~v~~~~~~ 125 (321)
..|.+|+...-.
T Consensus 96 ~~G~~V~t~tH~ 107 (201)
T 1vp8_A 96 KRGAKIVRQSHI 107 (201)
T ss_dssp HTTCEEEECCCT
T ss_pred hCCCEEEEEecc
Confidence 999999887743
No 45
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=89.26 E-value=3.9 Score=37.81 Aligned_cols=51 Identities=16% Similarity=0.199 Sum_probs=40.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 124 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~ 124 (321)
..|+.+..|..|..+|-.....|++++++ +..+.+++.++..|..++.-+.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvI---d~d~~~v~~~~~~g~~vi~GDa 55 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVL---DHDPDHIETLRKFGMKVFYGDA 55 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEE---ECCHHHHHHHHHTTCCCEESCT
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEE---ECCHHHHHHHHhCCCeEEEcCC
Confidence 34777889999999999999999999888 4456777788877777655543
No 46
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=88.94 E-value=2.8 Score=37.07 Aligned_cols=58 Identities=28% Similarity=0.290 Sum_probs=43.8
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 020805 62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 122 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~ 122 (321)
+.+.+++|...+|...+|.-|.+++..|+..|.+++++.. ++.+++.++.+|++.+.-
T Consensus 134 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~Ga~~~~~ 191 (325)
T 3jyn_A 134 QTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVS---SPEKAAHAKALGAWETID 191 (325)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHHHTCSEEEE
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCCEEEe
Confidence 4456788867666666899999999999999997666643 467788888888865543
No 47
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=88.25 E-value=4 Score=36.15 Aligned_cols=59 Identities=22% Similarity=0.313 Sum_probs=44.1
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 020805 62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 123 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~ 123 (321)
+.+.+++|...+|...+|.-|.+++..++..|.+++++.+ ++.|++.++.+|++.+...
T Consensus 142 ~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~ga~~~~~~ 200 (334)
T 3qwb_A 142 EAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVAS---TDEKLKIAKEYGAEYLINA 200 (334)
T ss_dssp TTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEEET
T ss_pred HhccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCcEEEeC
Confidence 3456778866666666899999999999999998666643 4677888888988765443
No 48
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=88.08 E-value=4.7 Score=35.82 Aligned_cols=61 Identities=21% Similarity=0.176 Sum_probs=44.8
Q ss_pred HHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 020805 59 DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 123 (321)
Q Consensus 59 ~a~~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~ 123 (321)
.++++..+++|...+| ..+|..|.+++..|+.+|.+++++.. ++.|.+.++.+|++.++-.
T Consensus 157 ~~l~~~~~~~g~~VlV-~GaG~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~~i~~ 217 (340)
T 3s2e_A 157 KGLKVTDTRPGQWVVI-SGIGGLGHVAVQYARAMGLRVAAVDI---DDAKLNLARRLGAEVAVNA 217 (340)
T ss_dssp HHHHTTTCCTTSEEEE-ECCSTTHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHTTCSEEEET
T ss_pred HHHHHcCCCCCCEEEE-ECCCHHHHHHHHHHHHCCCeEEEEeC---CHHHHHHHHHcCCCEEEeC
Confidence 4555666778866555 45688999999999999997665533 5678888999998765433
No 49
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=87.93 E-value=8.8 Score=30.49 Aligned_cols=95 Identities=15% Similarity=0.116 Sum_probs=61.9
Q ss_pred EEEeeCCChHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCC
Q 020805 72 VLIEPTSGNTGIGLAFMAAAK-QYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 150 (321)
Q Consensus 72 ~vv~~SsGN~g~AlA~aa~~~-G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 150 (321)
.++....|..|..+|...... |.+++++-. .+.+.+.++..|.+++..+.. + .
T Consensus 41 ~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~---~~~~~~~~~~~g~~~~~gd~~-~-~--------------------- 94 (183)
T 3c85_A 41 QVLILGMGRIGTGAYDELRARYGKISLGIEI---REEAAQQHRSEGRNVISGDAT-D-P--------------------- 94 (183)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHCSCEEEEES---CHHHHHHHHHTTCCEEECCTT-C-H---------------------
T ss_pred cEEEECCCHHHHHHHHHHHhccCCeEEEEEC---CHHHHHHHHHCCCCEEEcCCC-C-H---------------------
Confidence 456667899999999998888 999887743 356666677777665443321 0 0
Q ss_pred CCCCcchhhhhhchHHHHHhhh--CCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEE
Q 020805 151 FENPANPKIHYETTGPELWKGS--GGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGI 208 (321)
Q Consensus 151 ~~~~~~~~~g~~~~~~Ei~~ql--~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv 208 (321)
+.+++. -.+.|.||++++......-+...++..+|..+++..
T Consensus 95 ----------------~~l~~~~~~~~ad~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 95 ----------------DFWERILDTGHVKLVLLAMPHHQGNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp ----------------HHHHTBCSCCCCCEEEECCSSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred ----------------HHHHhccCCCCCCEEEEeCCChHHHHHHHHHHHHHCCCCEEEEE
Confidence 111111 134788888888766555566667777777777654
No 50
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=87.48 E-value=4.2 Score=36.06 Aligned_cols=57 Identities=23% Similarity=0.271 Sum_probs=43.1
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH-HHcCCEEEE
Q 020805 62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIIL-RAFGAELVL 121 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~-~~~Ga~v~~ 121 (321)
+.+.+++|...+|+..+|.-|.+++..++..|.+++++.. ++.+.+.+ +.+|++.+.
T Consensus 143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~~g~~~~~ 200 (336)
T 4b7c_A 143 DVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAG---GAEKCRFLVEELGFDGAI 200 (336)
T ss_dssp HTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCCSEEE
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHcCCCEEE
Confidence 5667788877777777799999999999999997666543 45677777 788875443
No 51
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=87.11 E-value=3.9 Score=36.65 Aligned_cols=57 Identities=25% Similarity=0.172 Sum_probs=43.5
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 020805 62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 121 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 121 (321)
+...+++|...+|...+|.-|.+++..|+..|.+++++.. ++.+.+.++.+|++.+.
T Consensus 161 ~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~~~ 217 (353)
T 4dup_A 161 QMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAG---STGKCEACERLGAKRGI 217 (353)
T ss_dssp TTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCSEEE
T ss_pred HhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHhcCCCEEE
Confidence 5566788877666667899999999999999998665533 45778888888887554
No 52
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=86.45 E-value=4.8 Score=36.19 Aligned_cols=57 Identities=25% Similarity=0.278 Sum_probs=43.2
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 020805 62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 122 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~ 122 (321)
+...+++|...+|.. +|.-|.+++..|+.+|.+++++. .++.|++.++.+|++.++-
T Consensus 183 ~~~~~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~vi~ 239 (363)
T 3uog_A 183 EKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTS---SSREKLDRAFALGADHGIN 239 (363)
T ss_dssp TTTCCCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEE---SCHHHHHHHHHHTCSEEEE
T ss_pred HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEe---cCchhHHHHHHcCCCEEEc
Confidence 556778886655655 89999999999999999766654 3467888888899865543
No 53
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=86.05 E-value=4.6 Score=35.57 Aligned_cols=61 Identities=28% Similarity=0.335 Sum_probs=45.2
Q ss_pred HHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 020805 59 DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 123 (321)
Q Consensus 59 ~a~~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~ 123 (321)
.+.++..+++|...+|...+|.-|.+++..|+.+|.+++++. +..+.+.++.+|++.++-.
T Consensus 143 ~al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~----~~~~~~~~~~lGa~~~i~~ 203 (321)
T 3tqh_A 143 QALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA----SKRNHAFLKALGAEQCINY 203 (321)
T ss_dssp HHHHHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE----CHHHHHHHHHHTCSEEEET
T ss_pred HHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe----ccchHHHHHHcCCCEEEeC
Confidence 344667788886655555689999999999999999766553 3456888899999865433
No 54
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=86.04 E-value=6.1 Score=35.20 Aligned_cols=54 Identities=24% Similarity=0.288 Sum_probs=43.1
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE
Q 020805 62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAEL 119 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v 119 (321)
+...+++|...+|...+|.-|.+++..|+..|.+++++ .++.+++.++.+|++.
T Consensus 144 ~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~----~~~~~~~~~~~lGa~~ 197 (343)
T 3gaz_A 144 DRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT----ARGSDLEYVRDLGATP 197 (343)
T ss_dssp TTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE----ECHHHHHHHHHHTSEE
T ss_pred HhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE----eCHHHHHHHHHcCCCE
Confidence 56677888666666668999999999999999976555 3467788889999987
No 55
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=85.99 E-value=6.8 Score=34.73 Aligned_cols=62 Identities=18% Similarity=0.164 Sum_probs=46.5
Q ss_pred HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 020805 60 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 124 (321)
Q Consensus 60 a~~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~ 124 (321)
+.+...+.+|.. |+...+|.-|...+..|+.+|...++++. .++.|++.++.+||+.++-..
T Consensus 152 ~~~~~~~~~g~~-VlV~GaG~vG~~aiq~ak~~G~~~vi~~~--~~~~k~~~a~~lGa~~~i~~~ 213 (346)
T 4a2c_A 152 AFHLAQGCENKN-VIIIGAGTIGLLAIQCAVALGAKSVTAID--ISSEKLALAKSFGAMQTFNSS 213 (346)
T ss_dssp HHHHTTCCTTSE-EEEECCSHHHHHHHHHHHHTTCSEEEEEE--SCHHHHHHHHHTTCSEEEETT
T ss_pred HHHHhccCCCCE-EEEECCCCcchHHHHHHHHcCCcEEEEEe--chHHHHHHHHHcCCeEEEeCC
Confidence 344555677755 44456688899889999999999877764 356889999999998776654
No 56
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=85.14 E-value=6.3 Score=35.44 Aligned_cols=57 Identities=23% Similarity=0.348 Sum_probs=42.0
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 020805 62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 121 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 121 (321)
+.+.+++|...+|...+|.-|.+++..|+..|.+++++.+ ++.+.+.++.+|++.+.
T Consensus 157 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~---~~~~~~~~~~~Ga~~~~ 213 (362)
T 2c0c_A 157 ELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCS---SDEKSAFLKSLGCDRPI 213 (362)
T ss_dssp HHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEE
T ss_pred HhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEEC---CHHHHHHHHHcCCcEEE
Confidence 3456777766666655899999999999999997655543 36777888888886544
No 57
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=85.11 E-value=3 Score=37.73 Aligned_cols=53 Identities=25% Similarity=0.080 Sum_probs=40.0
Q ss_pred CCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 020805 67 TPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 123 (321)
Q Consensus 67 ~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~ 123 (321)
.+|...+|...+|..|.+++..|+.+|.+++++. ++.|.+.++.+|++.++-.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~----~~~~~~~~~~lGa~~vi~~ 215 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC----SPHNFDLAKSRGAEEVFDY 215 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE----CGGGHHHHHHTTCSEEEET
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe----CHHHHHHHHHcCCcEEEEC
Confidence 5665666666669999999999999999866653 3567888999998755433
No 58
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=85.02 E-value=10 Score=34.08 Aligned_cols=60 Identities=18% Similarity=0.172 Sum_probs=42.6
Q ss_pred HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 020805 60 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 122 (321)
Q Consensus 60 a~~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~ 122 (321)
+.+...+++|...+|. .+|..|.+++..|+.+|..-++.+ ..++.|.+.++.+|++.++-
T Consensus 174 ~l~~~~~~~g~~VlV~-GaG~vG~~aiqlak~~Ga~~Vi~~--~~~~~~~~~a~~lGa~~vi~ 233 (370)
T 4ej6_A 174 GVDLSGIKAGSTVAIL-GGGVIGLLTVQLARLAGATTVILS--TRQATKRRLAEEVGATATVD 233 (370)
T ss_dssp HHHHHTCCTTCEEEEE-CCSHHHHHHHHHHHHTTCSEEEEE--CSCHHHHHHHHHHTCSEEEC
T ss_pred HHHhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEE--CCCHHHHHHHHHcCCCEEEC
Confidence 3455557777665554 569999999999999999544444 33467888889999876543
No 59
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=84.88 E-value=4.5 Score=36.07 Aligned_cols=57 Identities=23% Similarity=0.409 Sum_probs=42.3
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 020805 62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 121 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 121 (321)
+.+.+++|...+|...+|.-|.+++..|+..|.+++++... +.+++.++.+|++.+.
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~---~~~~~~~~~~ga~~v~ 209 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNR---TAATEFVKSVGADIVL 209 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS---GGGHHHHHHHTCSEEE
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHhcCCcEEe
Confidence 56667888676666667999999999999999987666543 3456677777876544
No 60
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=84.75 E-value=4.4 Score=36.01 Aligned_cols=59 Identities=17% Similarity=0.228 Sum_probs=42.5
Q ss_pred HHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 020805 61 EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 122 (321)
Q Consensus 61 ~~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~ 122 (321)
.+...+++|...+|...+|.-|.+++..|+..|.+++++.... .+++.++.+|++.++-
T Consensus 137 ~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~---~~~~~~~~lga~~~~~ 195 (340)
T 3gms_A 137 TETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNN---KHTEELLRLGAAYVID 195 (340)
T ss_dssp HTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSS---TTHHHHHHHTCSEEEE
T ss_pred HHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHhCCCcEEEe
Confidence 3556678887767766677999999999999999877665443 3556667788865543
No 61
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=84.55 E-value=9.6 Score=34.62 Aligned_cols=57 Identities=21% Similarity=0.276 Sum_probs=41.7
Q ss_pred HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE
Q 020805 60 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAEL 119 (321)
Q Consensus 60 a~~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v 119 (321)
+.++..+++|.+.+| ..+|.-|...+..|+.+|.+.++.+. .++.|++.++.+|+++
T Consensus 177 al~~~~~~~g~~VlV-~GaG~vG~~aiqlAk~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~ 233 (398)
T 1kol_A 177 GAVTAGVGPGSTVYV-AGAGPVGLAAAASARLLGAAVVIVGD--LNPARLAHAKAQGFEI 233 (398)
T ss_dssp HHHHTTCCTTCEEEE-ECCSHHHHHHHHHHHHTTCSEEEEEE--SCHHHHHHHHHTTCEE
T ss_pred HHHHcCCCCCCEEEE-ECCcHHHHHHHHHHHHCCCCeEEEEc--CCHHHHHHHHHcCCcE
Confidence 344556778866555 55799999999999999995444432 3568889999999984
No 62
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=83.65 E-value=5.4 Score=36.15 Aligned_cols=52 Identities=25% Similarity=0.302 Sum_probs=38.9
Q ss_pred CCeEEEee-CCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 020805 69 GESVLIEP-TSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 123 (321)
Q Consensus 69 g~~~vv~~-SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~ 123 (321)
|.+.+|.. .+|..|.+++..|+.+|.+++++.. ++.|.+.++.+|++.++-.
T Consensus 171 g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~~~~~ 223 (379)
T 3iup_A 171 GHSALVHTAAASNLGQMLNQICLKDGIKLVNIVR---KQEQADLLKAQGAVHVCNA 223 (379)
T ss_dssp TCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEES---SHHHHHHHHHTTCSCEEET
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEC---CHHHHHHHHhCCCcEEEeC
Confidence 43555653 7789999999999999998666643 5688889999998755443
No 63
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=83.42 E-value=6.3 Score=35.18 Aligned_cols=59 Identities=17% Similarity=0.122 Sum_probs=42.9
Q ss_pred HHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEEEE
Q 020805 59 DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQY-RLIITMPASMSLERRIILRAFGAELVL 121 (321)
Q Consensus 59 ~a~~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~-~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 121 (321)
.+.++..+++|.+.+|. .+|.-|.+.+..|+.+|. +++++ ..++.|++.++.+|++.++
T Consensus 157 ~al~~~~~~~g~~VlV~-GaG~vG~~a~qla~~~Ga~~Vi~~---~~~~~~~~~~~~lGa~~vi 216 (352)
T 3fpc_A 157 HGAELANIKLGDTVCVI-GIGPVGLMSVAGANHLGAGRIFAV---GSRKHCCDIALEYGATDII 216 (352)
T ss_dssp HHHHHTTCCTTCCEEEE-CCSHHHHHHHHHHHTTTCSSEEEE---CCCHHHHHHHHHHTCCEEE
T ss_pred HHHHhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCcEEEEE---CCCHHHHHHHHHhCCceEE
Confidence 34456667788665555 579999999999999998 45554 3456788888999986543
No 64
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=82.92 E-value=6.2 Score=35.35 Aligned_cols=60 Identities=25% Similarity=0.309 Sum_probs=45.3
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEE
Q 020805 62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVL 121 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~ 121 (321)
+.+.+++|...+|...+|..|.+++..|+.+|.+.++++..... ..+.+.++.+|++.++
T Consensus 161 ~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi 221 (357)
T 1zsy_A 161 DFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVI 221 (357)
T ss_dssp HSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEE
T ss_pred HHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEE
Confidence 44567788666665556999999999999999998888765443 4567788899987544
No 65
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=82.35 E-value=11 Score=33.75 Aligned_cols=57 Identities=18% Similarity=0.196 Sum_probs=42.3
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 020805 62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 121 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 121 (321)
+.+.+++|...+|+..+|.-|.+++..++..|.+++++.. ++.+++.++.+|++.+.
T Consensus 156 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~g~~~~~ 212 (354)
T 2j8z_A 156 LVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAG---SQKKLQMAEKLGAAAGF 212 (354)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHTCSEEE
T ss_pred HhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCcEEE
Confidence 4566777867666666899999999999999997665543 35677777888876543
No 66
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=82.34 E-value=6.1 Score=35.40 Aligned_cols=62 Identities=16% Similarity=0.164 Sum_probs=44.3
Q ss_pred HHHc-CCCCCC-CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEE
Q 020805 60 AEAK-GLITPG-ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVL 121 (321)
Q Consensus 60 a~~~-g~~~~g-~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~ 121 (321)
+..+ +.+++| ...+|...+|.-|.+++..|+.+|.+.++++..... ..+.+.++.+|++.++
T Consensus 157 ~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi 221 (364)
T 1gu7_A 157 MLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVI 221 (364)
T ss_dssp HHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEE
T ss_pred HHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEE
Confidence 4433 467777 666666666999999999999999988777755444 3445667889987543
No 67
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=82.02 E-value=10 Score=33.63 Aligned_cols=58 Identities=21% Similarity=0.225 Sum_probs=42.2
Q ss_pred HHHc-CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 020805 60 AEAK-GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 120 (321)
Q Consensus 60 a~~~-g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~ 120 (321)
+..+ ..+++|...+|+..+|..|.+++..++..|.+++++.. ++.+.+.++.+|++.+
T Consensus 157 al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~---~~~~~~~~~~~ga~~~ 215 (343)
T 2eih_A 157 MVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAG---SEDKLRRAKALGADET 215 (343)
T ss_dssp HHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCSEE
T ss_pred HHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHhcCCCEE
Confidence 4444 45777877777777799999999999999997666543 3567777777787543
No 68
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=81.66 E-value=14 Score=32.45 Aligned_cols=55 Identities=22% Similarity=0.279 Sum_probs=40.6
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE
Q 020805 62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAEL 119 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v 119 (321)
+...+++|...+|+..+|..|.+++..++..|.+++++.. ++.+.+.++.+|++.
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~---~~~~~~~~~~~g~~~ 193 (333)
T 1v3u_A 139 EVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAG---SDEKIAYLKQIGFDA 193 (333)
T ss_dssp TTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSE
T ss_pred HhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHhcCCcE
Confidence 4556777777777777799999999999999987665533 356666677777643
No 69
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=81.49 E-value=15 Score=32.70 Aligned_cols=56 Identities=29% Similarity=0.350 Sum_probs=41.7
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 020805 62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 120 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~ 120 (321)
+...+++|...+|+..+|.-|.+++..++..|.+++++.. ++.+.+.++.+|++.+
T Consensus 164 ~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~ga~~~ 219 (351)
T 1yb5_A 164 HSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAG---TEEGQKIVLQNGAHEV 219 (351)
T ss_dssp TTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEE
T ss_pred HhhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---ChhHHHHHHHcCCCEE
Confidence 3566778877777777799999999999999987665543 3566777788887643
No 70
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=81.19 E-value=14 Score=29.57 Aligned_cols=53 Identities=32% Similarity=0.488 Sum_probs=37.7
Q ss_pred cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCE
Q 020805 63 KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAE 118 (321)
Q Consensus 63 ~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~ 118 (321)
...+++|...+|+..+|..|.+++..++..|.+++++.. ++.+.+.++.+|++
T Consensus 33 ~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~---~~~~~~~~~~~g~~ 85 (198)
T 1pqw_A 33 VGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAG---SDAKREMLSRLGVE 85 (198)
T ss_dssp TSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHTTCCS
T ss_pred HhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCC
Confidence 455677766666666799999999999999987665543 35566666666654
No 71
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=81.10 E-value=11 Score=33.61 Aligned_cols=59 Identities=22% Similarity=0.198 Sum_probs=41.3
Q ss_pred HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 020805 60 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAK-QYRLIITMPASMSLERRIILRAFGAELVL 121 (321)
Q Consensus 60 a~~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~-G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 121 (321)
++++..+++|...+|+..+|..|.+++..++.. |.+++++.. ++.+.+.++.+|++.+.
T Consensus 162 ~l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~---~~~~~~~~~~~g~~~~~ 221 (347)
T 1jvb_A 162 AVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDV---REEAVEAAKRAGADYVI 221 (347)
T ss_dssp HHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEES---SHHHHHHHHHHTCSEEE
T ss_pred HHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcC---CHHHHHHHHHhCCCEEe
Confidence 344455777767777777669999999999998 987555432 35667777778876443
No 72
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=81.08 E-value=3 Score=36.72 Aligned_cols=58 Identities=19% Similarity=0.087 Sum_probs=43.4
Q ss_pred HHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 020805 59 DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 121 (321)
Q Consensus 59 ~a~~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 121 (321)
.+++...+++|...+|... |.-|.+++..|+.+|.+++++. ++.|.+.++.+|++.++
T Consensus 133 ~al~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~----~~~~~~~~~~lGa~~v~ 190 (315)
T 3goh_A 133 QAFEKIPLTKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS----ASLSQALAAKRGVRHLY 190 (315)
T ss_dssp HHHTTSCCCSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC----SSCCHHHHHHHTEEEEE
T ss_pred HHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE----ChhhHHHHHHcCCCEEE
Confidence 4556677888866555555 9999999999999999766664 33567778889997665
No 73
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=80.98 E-value=7.5 Score=31.93 Aligned_cols=75 Identities=19% Similarity=0.246 Sum_probs=53.7
Q ss_pred CCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe-------cC--CCCHHHHHHHH
Q 020805 43 EPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITM-------PA--SMSLERRIILR 113 (321)
Q Consensus 43 ~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivv-------p~--~~~~~~~~~~~ 113 (321)
+|.--+=+..+...+.+|.+.|. ...||..++|.++..++-.. -| +.++|. |. ..+++..+.++
T Consensus 30 ~~G~eNT~~tl~la~era~e~~I----k~iVVASssG~TA~k~~e~~--~~-~lVvVTh~~GF~~pg~~e~~~e~~~~L~ 102 (206)
T 1t57_A 30 EPGKENTERVLELVGERADQLGI----RNFVVASVSGETALRLSEMV--EG-NIVSVTHHAGFREKGQLELEDEARDALL 102 (206)
T ss_dssp SCSGGGHHHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHTTC--CS-EEEEECCCTTSSSTTCCSSCHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHcCC----CEEEEEeCCCHHHHHHHHHc--cC-CEEEEeCcCCCCCCCCCcCCHHHHHHHH
Confidence 45556777888888889999885 25455556688876555422 45 777776 32 45889999999
Q ss_pred HcCCEEEEeCC
Q 020805 114 AFGAELVLTDP 124 (321)
Q Consensus 114 ~~Ga~v~~~~~ 124 (321)
..|.+|+...-
T Consensus 103 ~~G~~V~t~tH 113 (206)
T 1t57_A 103 ERGVNVYAGSH 113 (206)
T ss_dssp HHTCEEECCSC
T ss_pred hCCCEEEEeec
Confidence 99999987764
No 74
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=80.92 E-value=6.2 Score=35.18 Aligned_cols=50 Identities=20% Similarity=0.283 Sum_probs=36.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 123 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~ 123 (321)
..+|...+|.-|.+++..|+.+|.+++++.+ ++.|++.++.+|++.++-.
T Consensus 167 ~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~~Ga~~~~~~ 216 (349)
T 3pi7_A 167 AFVMTAGASQLCKLIIGLAKEEGFRPIVTVR---RDEQIALLKDIGAAHVLNE 216 (349)
T ss_dssp EEEESSTTSHHHHHHHHHHHHHTCEEEEEES---CGGGHHHHHHHTCSEEEET
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCCEEEEC
Confidence 5555568899999999999999997666654 3356777788898755443
No 75
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=80.82 E-value=3.4 Score=38.61 Aligned_cols=57 Identities=30% Similarity=0.313 Sum_probs=45.4
Q ss_pred CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 020805 64 GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 123 (321)
Q Consensus 64 g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~ 123 (321)
..+++|...+|...+|..|.+.+..|+.+|.+.+++.. ++.|++.++.+|++.++-.
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~---~~~~~~~~~~lGa~~vi~~ 280 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVS---SPQKAEICRAMGAEAIIDR 280 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCCEEEET
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEEC---CHHHHHHHHhhCCcEEEec
Confidence 45678866666556699999999999999998877763 6788999999999876554
No 76
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=80.42 E-value=12 Score=32.97 Aligned_cols=55 Identities=24% Similarity=0.281 Sum_probs=40.2
Q ss_pred cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 020805 63 KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 120 (321)
Q Consensus 63 ~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~ 120 (321)
.+.+++|...+|+..+|..|.+++..++..|.+++++.. ++.+.+.++.+|++..
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~---~~~~~~~~~~~g~~~~ 194 (333)
T 1wly_A 140 THKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVS---TEEKAETARKLGCHHT 194 (333)
T ss_dssp TSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCSEE
T ss_pred hhCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCCEE
Confidence 556778867666666799999999999999987665543 3566777777777543
No 77
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=80.17 E-value=14 Score=32.48 Aligned_cols=58 Identities=24% Similarity=0.163 Sum_probs=41.7
Q ss_pred HHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 020805 60 AEA-KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 120 (321)
Q Consensus 60 a~~-~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~ 120 (321)
+.. ...+++|...+|+..+|.-|.+++..++..|.+++++.. ++.+.+.++.+|++.+
T Consensus 131 al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~---~~~~~~~~~~~g~~~~ 189 (327)
T 1qor_A 131 LLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVG---TAQKAQSALKAGAWQV 189 (327)
T ss_dssp HHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHHHTCSEE
T ss_pred HHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCCEE
Confidence 443 566778877677666899999999999999987665533 3566777777777543
No 78
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=80.14 E-value=3.5 Score=38.26 Aligned_cols=55 Identities=24% Similarity=0.285 Sum_probs=44.2
Q ss_pred CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 020805 64 GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 121 (321)
Q Consensus 64 g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 121 (321)
..+++|...+|...+|.-|.+++..|+..|.+.+++. .++.|++.++.+|++.+.
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~---~~~~~~~~~~~lGa~~~i 270 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVV---SSAQKEAAVRALGCDLVI 270 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE---SSHHHHHHHHHTTCCCEE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHhcCCCEEE
Confidence 5677886666666669999999999999999877776 367888899999997654
No 79
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=79.69 E-value=8.1 Score=35.28 Aligned_cols=55 Identities=25% Similarity=0.349 Sum_probs=40.0
Q ss_pred CCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 020805 65 LITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 122 (321)
Q Consensus 65 ~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~ 122 (321)
.+++|...+|. .+|.-|.+.+..|+.+|..-++.+ ..++.|++.++.+|++.++-
T Consensus 210 ~~~~g~~VlV~-GaG~vG~~aiqlak~~Ga~~Vi~~--~~~~~~~~~~~~lGa~~vi~ 264 (404)
T 3ip1_A 210 GIRPGDNVVIL-GGGPIGLAAVAILKHAGASKVILS--EPSEVRRNLAKELGADHVID 264 (404)
T ss_dssp CCCTTCEEEEE-CCSHHHHHHHHHHHHTTCSEEEEE--CSCHHHHHHHHHHTCSEEEC
T ss_pred CCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEE--CCCHHHHHHHHHcCCCEEEc
Confidence 57788665554 559999999999999999444443 23568888999999876543
No 80
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=79.44 E-value=20 Score=33.03 Aligned_cols=100 Identities=12% Similarity=-0.021 Sum_probs=62.6
Q ss_pred CCCCCCchhhHHHHHHHHHHHHcCCC-CCCCeEEEeeCCChHHHHHHHHHHH-cCCeEEEEecCCCCH------------
Q 020805 41 MMEPCSSVKDRIGYSMISDAEAKGLI-TPGESVLIEPTSGNTGIGLAFMAAA-KQYRLIITMPASMSL------------ 106 (321)
Q Consensus 41 ~~~ptGS~K~R~a~~~l~~a~~~g~~-~~g~~~vv~~SsGN~g~AlA~aa~~-~G~~~~ivvp~~~~~------------ 106 (321)
+-+|.|.-+. ...+|.....++.+ ..+...|||.+++--|.|+|...+. .|.+++++-......
T Consensus 20 ~~hp~gc~~~--v~~qi~~~~~~~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~ 97 (405)
T 3zu3_A 20 TAHPTGCEAN--VKKQIDYVTTEGPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNS 97 (405)
T ss_dssp CCCHHHHHHH--HHHHHHHHHHHCCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHH
T ss_pred CCCCHHHHHH--HHHHHHHHHhcCCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhH
Confidence 4567765443 45566666677776 3344567788888889999988888 999987765432221
Q ss_pred -HHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHhC
Q 020805 107 -ERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAKT 142 (321)
Q Consensus 107 -~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~~ 142 (321)
...+.++..|.++..+..+- +.++..+...+..++.
T Consensus 98 ~~~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~~~~ 135 (405)
T 3zu3_A 98 AAFHKFAAQKGLYAKSINGDAFSDEIKQLTIDAIKQDL 135 (405)
T ss_dssp HHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 12335677888877665442 3344445555555554
No 81
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=79.43 E-value=13 Score=31.25 Aligned_cols=70 Identities=10% Similarity=0.070 Sum_probs=46.2
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCC-hhHHHHHHHHHHH
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKG-MKGAVQKAEEILA 140 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~-~~~~~~~a~~~~~ 140 (321)
...+||..+|.-|.++|..-...|.+++++..... ....+.++..|.++..+..+-. .++..+...+..+
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 75 (255)
T 2q2v_A 5 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP-APALAEIARHGVKAVHHPADLSDVAQIEALFALAER 75 (255)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC-HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch-HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHH
Confidence 36788888899999999998889998777654433 4455666667887777665432 2333334444433
No 82
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=79.35 E-value=9.7 Score=32.65 Aligned_cols=74 Identities=7% Similarity=-0.045 Sum_probs=52.6
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHhC
Q 020805 69 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAKT 142 (321)
Q Consensus 69 g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~~ 142 (321)
|+..|||.+++--|.++|..-...|.+++++-.........+.+...|.++..+..+- +.++..+...+..++.
T Consensus 7 gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~ 81 (258)
T 4gkb_A 7 DKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATF 81 (258)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHh
Confidence 3477888888888999999999999998888776666666777777887777665432 3344455555555543
No 83
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=79.23 E-value=17 Score=32.43 Aligned_cols=59 Identities=22% Similarity=0.183 Sum_probs=41.4
Q ss_pred HHHHc--CCCCCCCeEEEeeCCChHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 020805 59 DAEAK--GLITPGESVLIEPTSGNTGIGLAFMAAAK-QYRLIITMPASMSLERRIILRAFGAELVL 121 (321)
Q Consensus 59 ~a~~~--g~~~~g~~~vv~~SsGN~g~AlA~aa~~~-G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 121 (321)
.+.++ ..+++|.+.+| ...|.-|..++..|+.+ |.+++++.+ ++.|++.++.+|++.++
T Consensus 175 ~al~~~~~~~~~g~~VlV-~GaG~vG~~avqlak~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~vi 236 (359)
T 1h2b_A 175 RAVKKAARTLYPGAYVAI-VGVGGLGHIAVQLLKVMTPATVIALDV---KEEKLKLAERLGADHVV 236 (359)
T ss_dssp HHHHHHHTTCCTTCEEEE-ECCSHHHHHHHHHHHHHCCCEEEEEES---SHHHHHHHHHTTCSEEE
T ss_pred HHHHhhccCCCCCCEEEE-ECCCHHHHHHHHHHHHcCCCeEEEEeC---CHHHHHHHHHhCCCEEE
Confidence 34444 56777755555 44588999888889999 987555432 46788888999986544
No 84
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=79.11 E-value=9.8 Score=33.84 Aligned_cols=51 Identities=29% Similarity=0.335 Sum_probs=38.3
Q ss_pred CCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 020805 68 PGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 121 (321)
Q Consensus 68 ~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 121 (321)
+|...+|...+|.-|.+++..|+.+|.+++++. .++.|++.++.+|++.+.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~vi 200 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTA---SRNETIEWTKKMGADIVL 200 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEC---CSHHHHHHHHHHTCSEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHhcCCcEEE
Confidence 676666666789999999999999998655553 246788888888876543
No 85
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=78.84 E-value=19 Score=32.06 Aligned_cols=55 Identities=22% Similarity=0.343 Sum_probs=40.5
Q ss_pred HcCCCCCC--CeEEEeeCCChHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHH-cCCEE
Q 020805 62 AKGLITPG--ESVLIEPTSGNTGIGLAFMAAAKQY-RLIITMPASMSLERRIILRA-FGAEL 119 (321)
Q Consensus 62 ~~g~~~~g--~~~vv~~SsGN~g~AlA~aa~~~G~-~~~ivvp~~~~~~~~~~~~~-~Ga~v 119 (321)
+.+.+++| ...+|+..+|.-|.+++..++..|. +++++.. ++.+.+.++. +|++.
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~---~~~~~~~~~~~~g~~~ 210 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICG---THEKCILLTSELGFDA 210 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEES---CHHHHHHHHHTSCCSE
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeC---CHHHHHHHHHHcCCce
Confidence 45667777 7777777779999999999999998 6666543 3466666665 77753
No 86
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=78.41 E-value=7 Score=34.80 Aligned_cols=58 Identities=14% Similarity=0.043 Sum_probs=41.3
Q ss_pred HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 020805 60 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 121 (321)
Q Consensus 60 a~~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 121 (321)
++++..+++|.+.+| ..+|.-|.+++..|+.+|.+++++... +.|.+.++.+|++.++
T Consensus 168 ~l~~~~~~~g~~VlV-~GaG~vG~~a~qla~~~Ga~Vi~~~~~---~~~~~~~~~lGa~~v~ 225 (348)
T 3two_A 168 PLKFSKVTKGTKVGV-AGFGGLGSMAVKYAVAMGAEVSVFARN---EHKKQDALSMGVKHFY 225 (348)
T ss_dssp HHHHTTCCTTCEEEE-ESCSHHHHHHHHHHHHTTCEEEEECSS---STTHHHHHHTTCSEEE
T ss_pred HHHhcCCCCCCEEEE-ECCcHHHHHHHHHHHHCCCeEEEEeCC---HHHHHHHHhcCCCeec
Confidence 344445777766555 456999999999999999976655433 3466777889987766
No 87
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=78.38 E-value=3.9 Score=36.10 Aligned_cols=57 Identities=26% Similarity=0.338 Sum_probs=40.5
Q ss_pred HcCCCCCCC-eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 020805 62 AKGLITPGE-SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 121 (321)
Q Consensus 62 ~~g~~~~g~-~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 121 (321)
++..+++|. +.+|...+|.-|.+++..|+.+|.+++++.... .|++.++.+|++.+.
T Consensus 142 ~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~---~~~~~~~~lGa~~~i 199 (328)
T 1xa0_A 142 EEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKA---AEHDYLRVLGAKEVL 199 (328)
T ss_dssp HHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCT---TCHHHHHHTTCSEEE
T ss_pred hhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHcCCcEEE
Confidence 344566764 656655569999999999999999866665543 456677789987543
No 88
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=78.34 E-value=11 Score=32.38 Aligned_cols=56 Identities=9% Similarity=-0.051 Sum_probs=41.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA 125 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~ 125 (321)
...+||..+|--|.++|......|.+++++-.........+.++..|.++..+..+
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D 87 (273)
T 3uf0_A 32 RTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVAD 87 (273)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEec
Confidence 36788888899999999999999999877763332234455667778888776644
No 89
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=78.21 E-value=15 Score=32.95 Aligned_cols=58 Identities=21% Similarity=0.275 Sum_probs=40.9
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 020805 62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 122 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~ 122 (321)
+...+++|...+|. .+|.-|.+++..|+.+|..-++.+. .++.|++.++.+|++.++-
T Consensus 184 ~~~~~~~g~~VlV~-GaG~vG~~a~qlak~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~vi~ 241 (371)
T 1f8f_A 184 NALKVTPASSFVTW-GAGAVGLSALLAAKVCGASIIIAVD--IVESRLELAKQLGATHVIN 241 (371)
T ss_dssp TTTCCCTTCEEEEE-SCSHHHHHHHHHHHHHTCSEEEEEE--SCHHHHHHHHHHTCSEEEE
T ss_pred hccCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCeEEEEC--CCHHHHHHHHHcCCCEEec
Confidence 45667788665555 4688999999999999985333332 2467888888889865443
No 90
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=78.20 E-value=21 Score=31.52 Aligned_cols=59 Identities=22% Similarity=0.245 Sum_probs=41.4
Q ss_pred HHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 020805 59 DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 120 (321)
Q Consensus 59 ~a~~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~ 120 (321)
.+.++..+++|...+|+..+|..|.+++..++..|.+++++... +.+.+.++.+|++.+
T Consensus 160 ~~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~---~~~~~~~~~~g~~~~ 218 (347)
T 2hcy_A 160 KALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGG---EGKEELFRSIGGEVF 218 (347)
T ss_dssp HHHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECS---TTHHHHHHHTTCCEE
T ss_pred HHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCC---HHHHHHHHHcCCceE
Confidence 34444456777777777777999999999999999876665443 234566677787543
No 91
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=78.06 E-value=14 Score=33.30 Aligned_cols=65 Identities=23% Similarity=0.225 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHH-cCC-CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE
Q 020805 51 RIGYSMISDAEA-KGL-ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAEL 119 (321)
Q Consensus 51 R~a~~~l~~a~~-~g~-~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v 119 (321)
||..+.+..+.+ .|. --.| ++|+....||-|..+|..++.+|.+++ +...+ ..+.+..+.+|++.
T Consensus 155 ~Gv~~~~~~~~~~~G~~~L~G-ktV~I~G~GnVG~~~A~~l~~~GakVv-vsD~~--~~~~~~a~~~ga~~ 221 (355)
T 1c1d_A 155 VGVFEAMKATVAHRGLGSLDG-LTVLVQGLGAVGGSLASLAAEAGAQLL-VADTD--TERVAHAVALGHTA 221 (355)
T ss_dssp HHHHHHHHHHHHHTTCCCSTT-CEEEEECCSHHHHHHHHHHHHTTCEEE-EECSC--HHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHhcCCCCCCC-CEEEEECcCHHHHHHHHHHHHCCCEEE-EEeCC--ccHHHHHHhcCCEE
Confidence 477777777654 453 1233 678888999999999988888888776 33322 22233344455543
No 92
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=77.80 E-value=12 Score=33.13 Aligned_cols=61 Identities=15% Similarity=0.127 Sum_probs=45.8
Q ss_pred HcCCCCCCCeEEEeeCC---ChHHHHHHHHHHHc-CCeEEEEecCC--CCHHHHHHHHHcCCEEEEeCC
Q 020805 62 AKGLITPGESVLIEPTS---GNTGIGLAFMAAAK-QYRLIITMPAS--MSLERRIILRAFGAELVLTDP 124 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~Ss---GN~g~AlA~aa~~~-G~~~~ivvp~~--~~~~~~~~~~~~Ga~v~~~~~ 124 (321)
+.|.+. | .+|+-... +|.+.|++.+++++ |++++++.|+. .++.-++.++..|+++..+..
T Consensus 145 ~~g~l~-g-lkva~vGD~~~~rva~Sl~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d 211 (306)
T 4ekn_B 145 EIGRID-G-IKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKES 211 (306)
T ss_dssp HHSCST-T-CEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEESC
T ss_pred HhCCcC-C-CEEEEEcCCCCCcHHHHHHHHHHhcCCCEEEEECCcccccCHHHHHHHHHcCCEEEEEcC
Confidence 345543 2 44555544 68999999999999 99999999985 456666777888999877763
No 93
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=77.34 E-value=10 Score=33.52 Aligned_cols=61 Identities=21% Similarity=0.074 Sum_probs=46.4
Q ss_pred HcCCCCCCCeEEEeeCC---ChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHHcCCEEEEeCC
Q 020805 62 AKGLITPGESVLIEPTS---GNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILRAFGAELVLTDP 124 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~Ss---GN~g~AlA~aa~~~G~~~~ivvp~~~--~~~~~~~~~~~Ga~v~~~~~ 124 (321)
+.|.+. +.+|+-... +|.+.|++.+++++|++++++.|+.- ++.-++.++..|+++..+..
T Consensus 149 ~~g~l~--gl~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d 214 (308)
T 1ml4_A 149 EFGRID--GLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETTT 214 (308)
T ss_dssp HSSCSS--SEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEESC
T ss_pred HhCCCC--CeEEEEeCCCCcCchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHcCCeEEEEcC
Confidence 456553 255665555 58999999999999999999999853 45556777888999877763
No 94
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=77.33 E-value=16 Score=32.38 Aligned_cols=57 Identities=35% Similarity=0.415 Sum_probs=40.7
Q ss_pred HHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEEE
Q 020805 59 DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQY-RLIITMPASMSLERRIILRAFGAELV 120 (321)
Q Consensus 59 ~a~~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~-~~~ivvp~~~~~~~~~~~~~~Ga~v~ 120 (321)
.+.++..+ +|.+.+|... |.-|.+++..|+.+|. +++++.+ ++.+.+.++.+|++.+
T Consensus 159 ~~l~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~---~~~~~~~~~~~Ga~~~ 216 (348)
T 2d8a_A 159 DTVLAGPI-SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEP---SDFRRELAKKVGADYV 216 (348)
T ss_dssp HHHTTSCC-TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECS---CHHHHHHHHHHTCSEE
T ss_pred HHHHhcCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHHHHhCCCEE
Confidence 34455556 7766555555 9999999999999998 6666533 3677888888887543
No 95
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=77.23 E-value=17 Score=32.89 Aligned_cols=56 Identities=25% Similarity=0.199 Sum_probs=40.7
Q ss_pred HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEE
Q 020805 60 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQY-RLIITMPASMSLERRIILRAFGAEL 119 (321)
Q Consensus 60 a~~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~-~~~ivvp~~~~~~~~~~~~~~Ga~v 119 (321)
+.++..+++|.+.+| ..+|.-|..++..|+.+|. +++++.+ ++.|++.++.+|+++
T Consensus 177 al~~~~~~~g~~VlV-~GaG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~a~~lGa~~ 233 (398)
T 2dph_A 177 GCVSAGVKPGSHVYI-AGAGPVGRCAAAGARLLGAACVIVGDQ---NPERLKLLSDAGFET 233 (398)
T ss_dssp HHHHTTCCTTCEEEE-ECCSHHHHHHHHHHHHHTCSEEEEEES---CHHHHHHHHTTTCEE
T ss_pred HHHHcCCCCCCEEEE-ECCCHHHHHHHHHHHHcCCCEEEEEcC---CHHHHHHHHHcCCcE
Confidence 445566778866555 4469899999999999998 5555432 467888889999974
No 96
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=77.20 E-value=16 Score=32.42 Aligned_cols=58 Identities=22% Similarity=0.252 Sum_probs=41.1
Q ss_pred HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 020805 60 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 121 (321)
Q Consensus 60 a~~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 121 (321)
+.+...+++|...+|.. +|.-|.+++..|+.+|.++ +.+. .++.+.+.++.+|++.++
T Consensus 160 al~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~V-i~~~--~~~~~~~~~~~lGa~~~~ 217 (352)
T 1e3j_A 160 ACRRAGVQLGTTVLVIG-AGPIGLVSVLAAKAYGAFV-VCTA--RSPRRLEVAKNCGADVTL 217 (352)
T ss_dssp HHHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEE-EEEE--SCHHHHHHHHHTTCSEEE
T ss_pred HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEE-EEEc--CCHHHHHHHHHhCCCEEE
Confidence 33444567776655654 6889999999999999984 3332 346788888999987443
No 97
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=76.79 E-value=4.2 Score=35.92 Aligned_cols=57 Identities=23% Similarity=0.335 Sum_probs=40.4
Q ss_pred HcCCCCCCC-eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 020805 62 AKGLITPGE-SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 121 (321)
Q Consensus 62 ~~g~~~~g~-~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 121 (321)
++..+++|. +.+|...+|.-|.+++..|+.+|.+.+++.... .|++.++.+|++.++
T Consensus 143 ~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~---~~~~~~~~lGa~~v~ 200 (330)
T 1tt7_A 143 EQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNR---EAADYLKQLGASEVI 200 (330)
T ss_dssp HHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSS---STHHHHHHHTCSEEE
T ss_pred HhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHcCCcEEE
Confidence 344566764 656666669999999999999999866665543 356667778986543
No 98
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=76.72 E-value=14 Score=32.74 Aligned_cols=61 Identities=16% Similarity=0.187 Sum_probs=37.9
Q ss_pred HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHH-cCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 020805 60 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAA-KQYRLIITMPASMSLERRIILRAFGAELVLTDP 124 (321)
Q Consensus 60 a~~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~-~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~ 124 (321)
+.+...+++|...+| ..+|.-|...+..+++ .|.+++++. .++.|++..+.+|++.++-..
T Consensus 155 ~l~~~~~~~g~~VlV-~GaG~~g~~a~~~a~~~~g~~Vi~~~---~~~~r~~~~~~~Ga~~~i~~~ 216 (348)
T 4eez_A 155 AIKVSGVKPGDWQVI-FGAGGLGNLAIQYAKNVFGAKVIAVD---INQDKLNLAKKIGADVTINSG 216 (348)
T ss_dssp HHHHHTCCTTCEEEE-ECCSHHHHHHHHHHHHTSCCEEEEEE---SCHHHHHHHHHTTCSEEEEC-
T ss_pred eecccCCCCCCEEEE-EcCCCccHHHHHHHHHhCCCEEEEEE---CcHHHhhhhhhcCCeEEEeCC
Confidence 344444677755444 5556666555555655 466666553 346788888999998766543
No 99
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=76.39 E-value=14 Score=32.65 Aligned_cols=63 Identities=21% Similarity=0.093 Sum_probs=43.2
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHH----HcCCEEEEeCC
Q 020805 62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILR----AFGAELVLTDP 124 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~--~~~~~~~~~----~~Ga~v~~~~~ 124 (321)
+.|.+.+|-+..+..=.+|.+.|++.+++++|++++++.|+.- ++.-++.++ ..|+.+..+..
T Consensus 139 ~~g~l~~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d 207 (307)
T 3tpf_A 139 WNKMQNGIAKVAFIGDSNNMCNSWLITAAILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGYD 207 (307)
T ss_dssp TTCCGGGCCEEEEESCSSHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESC
T ss_pred HhCCCCCCCEEEEEcCCCccHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEcC
Confidence 3455543433333333478999999999999999999999863 333334343 77999988773
No 100
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=76.13 E-value=11 Score=33.98 Aligned_cols=59 Identities=24% Similarity=0.249 Sum_probs=43.2
Q ss_pred HHHHcCC-CCCCCeEEEeeCCChHHHHHHHHHHHcC-CeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 020805 59 DAEAKGL-ITPGESVLIEPTSGNTGIGLAFMAAAKQ-YRLIITMPASMSLERRIILRAFGAELVL 121 (321)
Q Consensus 59 ~a~~~g~-~~~g~~~vv~~SsGN~g~AlA~aa~~~G-~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 121 (321)
.+.++.. +++|...+|.. +|.-|.+++..|+.+| .+++++.+ ++.|++.++.+|++.++
T Consensus 185 ~al~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~~~~lGa~~vi 245 (380)
T 1vj0_A 185 HAFDEYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAG---SPNRLKLAEEIGADLTL 245 (380)
T ss_dssp HHHHTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEES---CHHHHHHHHHTTCSEEE
T ss_pred HHHHhcCCCCCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcC---CHHHHHHHHHcCCcEEE
Confidence 3445555 67776666666 8999999999999999 47666643 45788888899986544
No 101
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=75.83 E-value=21 Score=29.94 Aligned_cols=72 Identities=13% Similarity=0.027 Sum_probs=48.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
...+||..+|--|.++|..-...|.+++++-.... .....+.++..|.++..+..+- +.++..+...+..++
T Consensus 8 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (252)
T 3h7a_A 8 ATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH 81 (252)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh
Confidence 36788888899999999999999999777755432 2344556777788888776543 333444445555444
No 102
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=75.80 E-value=19 Score=31.77 Aligned_cols=52 Identities=27% Similarity=0.275 Sum_probs=36.8
Q ss_pred CCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 020805 65 LITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 120 (321)
Q Consensus 65 ~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~ 120 (321)
.+++|...+|... |.-|.+++..++.+|.+++++. .++.+++.++.+|++.+
T Consensus 161 ~~~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~~ 212 (339)
T 1rjw_A 161 GAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVD---IGDEKLELAKELGADLV 212 (339)
T ss_dssp TCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEEC---SCHHHHHHHHHTTCSEE
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHHCCCCEE
Confidence 3667756555555 7799999999999998655543 24677778888888643
No 103
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=75.33 E-value=20 Score=31.93 Aligned_cols=60 Identities=12% Similarity=0.113 Sum_probs=43.5
Q ss_pred HcCCCCCCCeEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHH----HcCCEEEEeC
Q 020805 62 AKGLITPGESVLIEPTS--GNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILR----AFGAELVLTD 123 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~Ss--GN~g~AlA~aa~~~G~~~~ivvp~~~--~~~~~~~~~----~~Ga~v~~~~ 123 (321)
+.|.+. | .+|+-... +|.+.|++.+++++|++++++.|+.- ++.-++.++ ..|+++..+.
T Consensus 161 ~~g~l~-g-l~va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~ 228 (325)
T 1vlv_A 161 NFGRLK-G-VKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTS 228 (325)
T ss_dssp HHSCST-T-CEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEES
T ss_pred HhCCcC-C-cEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEc
Confidence 346543 2 44555555 59999999999999999999999853 443334443 7899998886
No 104
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=75.22 E-value=14 Score=33.19 Aligned_cols=54 Identities=24% Similarity=0.233 Sum_probs=40.3
Q ss_pred CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 020805 66 ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 123 (321)
Q Consensus 66 ~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~ 123 (321)
+++|...+|...+|.-|.+++..|+..|.+++++. + ..+.+.++.+|++.++-.
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~--~--~~~~~~~~~lGa~~v~~~ 234 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC--S--QDASELVRKLGADDVIDY 234 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE--C--GGGHHHHHHTTCSEEEET
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe--C--hHHHHHHHHcCCCEEEEC
Confidence 67776666666689999999999999998765543 2 356778889999765543
No 105
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=75.05 E-value=12 Score=33.02 Aligned_cols=55 Identities=22% Similarity=0.230 Sum_probs=40.1
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-HcCCEE
Q 020805 62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILR-AFGAEL 119 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~-~~Ga~v 119 (321)
+...+++|...+|+..+|.-|.+++..++..|.+++++.. ++.+.+.++ .+|++.
T Consensus 149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~---~~~~~~~~~~~~g~~~ 204 (345)
T 2j3h_A 149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAG---SKEKVDLLKTKFGFDD 204 (345)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTSCCSE
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHcCCce
Confidence 4456777767677666799999999999999987555533 356777776 678754
No 106
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=75.04 E-value=13 Score=33.53 Aligned_cols=107 Identities=16% Similarity=0.153 Sum_probs=64.5
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHH
Q 020805 62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQY-RLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILA 140 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~-~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~ 140 (321)
+...+++|...+|. .+|.-|.+++..|+.+|. +++++ . .++.|++.++.+|++.++-..+
T Consensus 187 ~~~~~~~g~~VlV~-GaG~vG~~a~q~a~~~Ga~~Vi~~-~--~~~~~~~~a~~lGa~~vi~~~~--------------- 247 (378)
T 3uko_A 187 NTAKVEPGSNVAIF-GLGTVGLAVAEGAKTAGASRIIGI-D--IDSKKYETAKKFGVNEFVNPKD--------------- 247 (378)
T ss_dssp TTTCCCTTCCEEEE-CCSHHHHHHHHHHHHHTCSCEEEE-C--SCTTHHHHHHTTTCCEEECGGG---------------
T ss_pred hhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCeEEEE-c--CCHHHHHHHHHcCCcEEEcccc---------------
Confidence 55667788665555 559999999999999999 45544 2 2335777888899865432210
Q ss_pred hCCCeEEcCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHHhcCCC-cEEEEEe
Q 020805 141 KTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPN-IKLYGIE 209 (321)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~-~~vigv~ 209 (321)
. +. ....+|.+..++.+|.+|-++|+..++. .+++.+.+. -+++.+-
T Consensus 248 -~----------~~--------~~~~~i~~~~~gg~D~vid~~g~~~~~~---~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 248 -H----------DK--------PIQEVIVDLTDGGVDYSFECIGNVSVMR---AALECCHKGWGTSVIVG 295 (378)
T ss_dssp -C----------SS--------CHHHHHHHHTTSCBSEEEECSCCHHHHH---HHHHTBCTTTCEEEECS
T ss_pred -C----------ch--------hHHHHHHHhcCCCCCEEEECCCCHHHHH---HHHHHhhccCCEEEEEc
Confidence 0 00 0112233333346899999998755543 445555553 5665544
No 107
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=74.79 E-value=33 Score=27.94 Aligned_cols=49 Identities=18% Similarity=0.144 Sum_probs=34.9
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH-HHcCCEEEEeCC
Q 020805 73 LIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIIL-RAFGAELVLTDP 124 (321)
Q Consensus 73 vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~-~~~Ga~v~~~~~ 124 (321)
++....|+.|..+|......|.+++++-. .+.+.+.+ +.+|.+++.-+.
T Consensus 3 iiIiG~G~~G~~la~~L~~~g~~v~vid~---~~~~~~~l~~~~~~~~i~gd~ 52 (218)
T 3l4b_C 3 VIIIGGETTAYYLARSMLSRKYGVVIINK---DRELCEEFAKKLKATIIHGDG 52 (218)
T ss_dssp EEEECCHHHHHHHHHHHHHTTCCEEEEES---CHHHHHHHHHHSSSEEEESCT
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEEC---CHHHHHHHHHHcCCeEEEcCC
Confidence 45566799999999999999999888843 35555554 346777655443
No 108
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=74.77 E-value=19 Score=33.34 Aligned_cols=100 Identities=15% Similarity=0.049 Sum_probs=60.4
Q ss_pred CCCCCCchhhHHHHHHHHHHHHcCCCC-CCCeEEEeeCCChHHHHHHHHHHH-cCCeEEEEecCCCCH------------
Q 020805 41 MMEPCSSVKDRIGYSMISDAEAKGLIT-PGESVLIEPTSGNTGIGLAFMAAA-KQYRLIITMPASMSL------------ 106 (321)
Q Consensus 41 ~~~ptGS~K~R~a~~~l~~a~~~g~~~-~g~~~vv~~SsGN~g~AlA~aa~~-~G~~~~ivvp~~~~~------------ 106 (321)
+.+|.|.++. ....+..-.+++.+. .+...|||..|+--|+|+|...+. .|.+++++-.+....
T Consensus 34 ~a~p~g~~~~--v~~qi~y~~~~~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~ 111 (422)
T 3s8m_A 34 TTHPLGCERN--VLEQIAATRARGVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNS 111 (422)
T ss_dssp CCCHHHHHHH--HHHHHHHHHHTCCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHH
T ss_pred cCCchhHHHH--HHHHHHHHhhccccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchh
Confidence 3445555442 223455555666663 345677888888888999998888 999988775442211
Q ss_pred -HHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHhC
Q 020805 107 -ERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAKT 142 (321)
Q Consensus 107 -~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~~ 142 (321)
...+.++..|.++..+..+- +.++..+...+..++.
T Consensus 112 ~a~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~~~~ 149 (422)
T 3s8m_A 112 AAFDKHAKAAGLYSKSINGDAFSDAARAQVIELIKTEM 149 (422)
T ss_dssp HHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 12356778898877665443 2334444455555554
No 109
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=74.77 E-value=20 Score=31.61 Aligned_cols=60 Identities=18% Similarity=0.205 Sum_probs=43.5
Q ss_pred HcCCCCCCCeEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHH----HcCCEEEEeC
Q 020805 62 AKGLITPGESVLIEPTS--GNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILR----AFGAELVLTD 123 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~Ss--GN~g~AlA~aa~~~G~~~~ivvp~~~--~~~~~~~~~----~~Ga~v~~~~ 123 (321)
+.|.+. | .+|+-... +|.+.|++.+++++|++++++.|+.- ++.-++.++ ..|+++..+.
T Consensus 142 ~~g~l~-g-l~va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~ 209 (307)
T 2i6u_A 142 RKGALR-G-LRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTA 209 (307)
T ss_dssp HHSCCT-T-CEEEEESCTTSHHHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEES
T ss_pred HhCCcC-C-eEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 346543 2 44555555 49999999999999999999999964 333334343 7899888876
No 110
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=74.72 E-value=12 Score=33.54 Aligned_cols=51 Identities=10% Similarity=0.130 Sum_probs=36.8
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 020805 69 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 120 (321)
Q Consensus 69 g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~ 120 (321)
|...+|... |.-|.+++..++..|.+++++........+.+.++.+|++.+
T Consensus 181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v 231 (366)
T 2cdc_A 181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYY 231 (366)
T ss_dssp TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCcee
Confidence 756566555 999999999999999976666543323356777788888765
No 111
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=74.57 E-value=10 Score=28.63 Aligned_cols=49 Identities=24% Similarity=0.248 Sum_probs=35.8
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 020805 72 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 123 (321)
Q Consensus 72 ~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~ 123 (321)
.++....|..|.++|......|.+++++-. .+.+.+.++..|.+++..+
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~g~~V~~id~---~~~~~~~~~~~~~~~~~gd 56 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAAGKKVLAVDK---SKEKIELLEDEGFDAVIAD 56 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEES---CHHHHHHHHHTTCEEEECC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEEC---CHHHHHHHHHCCCcEEECC
Confidence 366667799999999999999999888743 4566666666666655443
No 112
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=74.44 E-value=12 Score=31.70 Aligned_cols=73 Identities=15% Similarity=0.156 Sum_probs=38.5
Q ss_pred CeEEEeeCCCh--HHHHHHHHHHHcCCeEEEEecCCCCHHH-HHHHHHcC-CEEEEeCCC-CChhHHHHHHHHHHHhC
Q 020805 70 ESVLIEPTSGN--TGIGLAFMAAAKQYRLIITMPASMSLER-RIILRAFG-AELVLTDPA-KGMKGAVQKAEEILAKT 142 (321)
Q Consensus 70 ~~~vv~~SsGN--~g~AlA~aa~~~G~~~~ivvp~~~~~~~-~~~~~~~G-a~v~~~~~~-~~~~~~~~~a~~~~~~~ 142 (321)
+..|||..+|+ -|.++|..-.+.|.++++.-........ .+.++..| .+++.+..+ .+.++..+...+..++.
T Consensus 7 K~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (256)
T 4fs3_A 7 KTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV 84 (256)
T ss_dssp CEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 36677775553 5677777788889887776544333222 33344443 244433322 23344444455554443
No 113
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=74.44 E-value=38 Score=28.48 Aligned_cols=41 Identities=17% Similarity=0.169 Sum_probs=30.1
Q ss_pred HHHHhhhCCCCCEEEEecCCchhHHHHHHHHHhcCC-CcEEEEEe
Q 020805 166 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNP-NIKLYGIE 209 (321)
Q Consensus 166 ~Ei~~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~-~~~vigv~ 209 (321)
.+++++- ++||+||+. +...+.|+..++++.+- ++.|+|.+
T Consensus 187 ~~~l~~~-~~~~ai~~~--~d~~a~g~~~al~~~g~~di~vig~d 228 (293)
T 3l6u_A 187 RQVIDSG-IPFDAVYCH--NDDIAMGVLEALKKAKISGKIVVGID 228 (293)
T ss_dssp HHHHHTT-CCCSEEEES--SHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred HHHHHhC-CCCCEEEEC--CchHHHHHHHHHHhCCCCCeEEEEec
Confidence 3444443 578998874 66777799999998865 78888887
No 114
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=74.43 E-value=6.9 Score=34.36 Aligned_cols=56 Identities=20% Similarity=0.281 Sum_probs=40.2
Q ss_pred cCCCCCCC-eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 020805 63 KGLITPGE-SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 121 (321)
Q Consensus 63 ~g~~~~g~-~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 121 (321)
+..++++. +.+|...+|..|.+++..|+.+|.+++++.+. +.|.+.++.+|++.++
T Consensus 140 ~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~---~~~~~~~~~lGa~~vi 196 (324)
T 3nx4_A 140 DAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGR---ESTHGYLKSLGANRIL 196 (324)
T ss_dssp HTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESC---GGGHHHHHHHTCSEEE
T ss_pred hcccCCCCCeEEEECCCcHHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHhcCCCEEE
Confidence 33345532 45555556999999999999999987777543 4577788889987654
No 115
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=74.23 E-value=8.2 Score=33.53 Aligned_cols=55 Identities=27% Similarity=0.378 Sum_probs=39.9
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 020805 62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 120 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~ 120 (321)
+.+ +++|.+.+|...+|..|.+++..|+..|.+++++.+. +.+.+.++.+|++.+
T Consensus 120 ~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~---~~~~~~~~~~ga~~~ 174 (302)
T 1iz0_A 120 RAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASR---PEKLALPLALGAEEA 174 (302)
T ss_dssp HTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESS---GGGSHHHHHTTCSEE
T ss_pred Hhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHhcCCCEE
Confidence 356 7788676666667999999999999999976666542 345566677887643
No 116
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=73.96 E-value=16 Score=32.40 Aligned_cols=60 Identities=17% Similarity=0.106 Sum_probs=45.0
Q ss_pred HcCCCCCCCeEEEeeCC---ChHHHHHHHHHHHc-CCeEEEEecCCC--CHHHHHHHHHcCCEEEEeC
Q 020805 62 AKGLITPGESVLIEPTS---GNTGIGLAFMAAAK-QYRLIITMPASM--SLERRIILRAFGAELVLTD 123 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~Ss---GN~g~AlA~aa~~~-G~~~~ivvp~~~--~~~~~~~~~~~Ga~v~~~~ 123 (321)
+.|.+. | .+|+-... +|.+.+++.+++++ |++++++.|+.- ++..++.++..|+++..+.
T Consensus 148 ~~g~l~-g-l~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~ 213 (310)
T 3csu_A 148 TQGRLD-N-LHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHS 213 (310)
T ss_dssp HHSCSS-S-CEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECS
T ss_pred HhCCcC-C-cEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHcCCeEEEEc
Confidence 346543 2 44555555 58999999999999 999999999853 4555677788899887765
No 117
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=72.99 E-value=13 Score=33.26 Aligned_cols=57 Identities=30% Similarity=0.389 Sum_probs=40.5
Q ss_pred HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEEE
Q 020805 60 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQY-RLIITMPASMSLERRIILRAFGAELV 120 (321)
Q Consensus 60 a~~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~-~~~ivvp~~~~~~~~~~~~~~Ga~v~ 120 (321)
+.++..+++|.+.+|. .+|.-|.+++..|+.+|. +++++. .++.|++.++.+|++.+
T Consensus 163 al~~~~~~~g~~VlV~-GaG~vG~~aiqlak~~Ga~~Vi~~~---~~~~~~~~a~~lGa~~v 220 (356)
T 1pl8_A 163 ACRRGGVTLGHKVLVC-GAGPIGMVTLLVAKAMGAAQVVVTD---LSATRLSKAKEIGADLV 220 (356)
T ss_dssp HHHHHTCCTTCEEEEE-CCSHHHHHHHHHHHHTTCSEEEEEE---SCHHHHHHHHHTTCSEE
T ss_pred HHHhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEEC---CCHHHHHHHHHhCCCEE
Confidence 3444556777665554 568899999999999998 555443 24678888899998643
No 118
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=72.87 E-value=31 Score=29.24 Aligned_cols=72 Identities=13% Similarity=0.134 Sum_probs=49.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--------HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHH
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--------LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILA 140 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~--------~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~ 140 (321)
...+||..+|--|.++|..-...|.+++++-..... ....+.++..|.++..+..+- +.++..+...+..+
T Consensus 7 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 86 (274)
T 3e03_A 7 KTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVD 86 (274)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 367888888999999999988999988777655322 334556677799988776543 33344455555554
Q ss_pred h
Q 020805 141 K 141 (321)
Q Consensus 141 ~ 141 (321)
+
T Consensus 87 ~ 87 (274)
T 3e03_A 87 T 87 (274)
T ss_dssp H
T ss_pred H
Confidence 4
No 119
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=72.06 E-value=13 Score=33.20 Aligned_cols=50 Identities=20% Similarity=0.195 Sum_probs=35.7
Q ss_pred CeEEEeeCCChHHHHH-HHHH-HHcCCe-EEEEecCCCCHHHHHHHHHcCCEEE
Q 020805 70 ESVLIEPTSGNTGIGL-AFMA-AAKQYR-LIITMPASMSLERRIILRAFGAELV 120 (321)
Q Consensus 70 ~~~vv~~SsGN~g~Al-A~aa-~~~G~~-~~ivvp~~~~~~~~~~~~~~Ga~v~ 120 (321)
.+.+|... |.-|..+ +..| +.+|.+ ++++.+......|.+.++.+|++.+
T Consensus 174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v 226 (357)
T 2b5w_A 174 SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV 226 (357)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc
Confidence 56555554 9999988 8888 899997 6666554432336778888999765
No 120
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=71.91 E-value=11 Score=33.71 Aligned_cols=58 Identities=19% Similarity=0.161 Sum_probs=39.1
Q ss_pred HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 020805 60 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 121 (321)
Q Consensus 60 a~~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 121 (321)
++++..+++|.+.+|... |.-|..++..|+.+|.+++++.+.. .+++.++.+|++.++
T Consensus 171 ~l~~~~~~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~---~~~~~~~~lGa~~v~ 228 (360)
T 1piw_A 171 PLVRNGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSS---RKREDAMKMGADHYI 228 (360)
T ss_dssp HHHHTTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSS---TTHHHHHHHTCSEEE
T ss_pred HHHHcCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCH---HHHHHHHHcCCCEEE
Confidence 444455777766555544 9999999999999999855554333 345666778876543
No 121
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=71.16 E-value=16 Score=32.70 Aligned_cols=54 Identities=20% Similarity=0.199 Sum_probs=40.8
Q ss_pred eEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHH----HcCCEEEEeCC
Q 020805 71 SVLIEPTS--GNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILR----AFGAELVLTDP 124 (321)
Q Consensus 71 ~~vv~~Ss--GN~g~AlA~aa~~~G~~~~ivvp~~~--~~~~~~~~~----~~Ga~v~~~~~ 124 (321)
.+|+-... .|.+.|++.+++++|++++++.|+.- ++.-++.++ ..|+++..+..
T Consensus 156 l~ia~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d 217 (333)
T 1duv_G 156 MTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTED 217 (333)
T ss_dssp CEEEEESCTTSHHHHHHHHHHHHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEESC
T ss_pred cEEEEECCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEEC
Confidence 44555555 49999999999999999999999853 433434443 78999988863
No 122
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=71.00 E-value=22 Score=31.42 Aligned_cols=54 Identities=22% Similarity=0.326 Sum_probs=38.6
Q ss_pred CCCCCCeEEEeeCCChHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 020805 65 LITPGESVLIEPTSGNTGIGLAFMAAAK-QYRLIITMPASMSLERRIILRAFGAELVLT 122 (321)
Q Consensus 65 ~~~~g~~~vv~~SsGN~g~AlA~aa~~~-G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~ 122 (321)
.+++|...+|. .+|..|.+.+..|+.+ |.+++++ ..++.|++.++.+|++.+..
T Consensus 168 ~~~~g~~vlv~-GaG~vG~~a~qla~~~g~~~Vi~~---~~~~~~~~~~~~lGa~~~i~ 222 (345)
T 3jv7_A 168 LLGPGSTAVVI-GVGGLGHVGIQILRAVSAARVIAV---DLDDDRLALAREVGADAAVK 222 (345)
T ss_dssp GCCTTCEEEEE-CCSHHHHHHHHHHHHHCCCEEEEE---ESCHHHHHHHHHTTCSEEEE
T ss_pred CCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEE---cCCHHHHHHHHHcCCCEEEc
Confidence 46677555554 5599999988889988 5665555 23568888999999876543
No 123
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=70.99 E-value=32 Score=30.60 Aligned_cols=72 Identities=17% Similarity=0.161 Sum_probs=49.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--------HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHH
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--------LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILA 140 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~--------~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~ 140 (321)
...+||..+|--|.++|......|.+++++.....+ ....+.++..|.++..+..+- +.++..+...+..+
T Consensus 46 k~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~ 125 (346)
T 3kvo_A 46 CTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIK 125 (346)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 367888888889999999999999998887665432 234567788899988776443 33444445555544
Q ss_pred h
Q 020805 141 K 141 (321)
Q Consensus 141 ~ 141 (321)
+
T Consensus 126 ~ 126 (346)
T 3kvo_A 126 K 126 (346)
T ss_dssp H
T ss_pred H
Confidence 4
No 124
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=70.36 E-value=14 Score=33.20 Aligned_cols=56 Identities=18% Similarity=0.160 Sum_probs=38.6
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 020805 62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 120 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~ 120 (321)
+...+++|.+.+|. .+|.-|.+++..|+.+|..-++.+. .++.|++.++.+|++.+
T Consensus 185 ~~~~~~~g~~VlV~-GaG~vG~~aiqlak~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~v 240 (373)
T 1p0f_A 185 NTAKVTPGSTCAVF-GLGGVGFSAIVGCKAAGASRIIGVG--THKDKFPKAIELGATEC 240 (373)
T ss_dssp TTTCCCTTCEEEEE-CCSHHHHHHHHHHHHHTCSEEEEEC--SCGGGHHHHHHTTCSEE
T ss_pred hccCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCeEEEEC--CCHHHHHHHHHcCCcEE
Confidence 45667788665555 5799999999999999984333332 23456777888898643
No 125
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=70.25 E-value=28 Score=31.40 Aligned_cols=60 Identities=27% Similarity=0.297 Sum_probs=43.4
Q ss_pred HcCCCCCCCeEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHH----HcCCEEEEeC
Q 020805 62 AKGLITPGESVLIEPTS--GNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILR----AFGAELVLTD 123 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~Ss--GN~g~AlA~aa~~~G~~~~ivvp~~~--~~~~~~~~~----~~Ga~v~~~~ 123 (321)
+.|.+. | .+|+-... +|.+.|++.+++++|++++++.|+.- ++.-++.++ ..|+++..+.
T Consensus 170 ~~g~l~-g-l~va~vGD~~~rva~Sl~~~~~~lG~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~~~ 237 (359)
T 2w37_A 170 NFGKLQ-G-LTLTFMGDGRNNVANSLLVTGAILGVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVITD 237 (359)
T ss_dssp HHSCCT-T-CEEEEESCTTSHHHHHHHHHHHHHTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEEES
T ss_pred HhCCcC-C-eEEEEECCCccchHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 346543 2 44555555 59999999999999999999999853 433434443 7899988886
No 126
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=70.21 E-value=17 Score=32.58 Aligned_cols=55 Identities=15% Similarity=0.247 Sum_probs=38.7
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCe-EEEEecCCCCHHHHHHHHHcCCEEE
Q 020805 62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYR-LIITMPASMSLERRIILRAFGAELV 120 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~-~~ivvp~~~~~~~~~~~~~~Ga~v~ 120 (321)
+...+++|.+.+|. .+|.-|.+++..|+.+|.. ++++. .++.|++.++.+|++.+
T Consensus 186 ~~~~~~~g~~VlV~-GaG~vG~~a~qla~~~Ga~~Vi~~~---~~~~~~~~~~~lGa~~v 241 (374)
T 1cdo_A 186 NTAKVEPGSTCAVF-GLGAVGLAAVMGCHSAGAKRIIAVD---LNPDKFEKAKVFGATDF 241 (374)
T ss_dssp TTTCCCTTCEEEEE-CCSHHHHHHHHHHHHTTCSEEEEEC---SCGGGHHHHHHTTCCEE
T ss_pred hccCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEEc---CCHHHHHHHHHhCCceE
Confidence 45667787665555 4699999999999999984 44442 23466777888898643
No 127
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=69.96 E-value=16 Score=32.76 Aligned_cols=56 Identities=16% Similarity=0.195 Sum_probs=38.3
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 020805 62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 120 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~ 120 (321)
+...+++|...+|.. +|.-|.+++..|+.+|..-++.+. .++.|++.++.+|++.+
T Consensus 185 ~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~--~~~~~~~~~~~lGa~~v 240 (374)
T 2jhf_A 185 KVAKVTQGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVD--INKDKFAKAKEVGATEC 240 (374)
T ss_dssp TTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEC--SCGGGHHHHHHTTCSEE
T ss_pred hccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEc--CCHHHHHHHHHhCCceE
Confidence 456677886655554 799999999999999984333332 23456777788888543
No 128
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=69.82 E-value=16 Score=32.78 Aligned_cols=55 Identities=20% Similarity=0.187 Sum_probs=38.7
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEEE
Q 020805 62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQY-RLIITMPASMSLERRIILRAFGAELV 120 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~-~~~ivvp~~~~~~~~~~~~~~Ga~v~ 120 (321)
+...+++|.+.+|. .+|.-|.+++..|+.+|. +++++.. ++.|++.++.+|++.+
T Consensus 189 ~~~~~~~g~~VlV~-GaG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~a~~lGa~~v 244 (376)
T 1e3i_A 189 NTAKVTPGSTCAVF-GLGCVGLSAIIGCKIAGASRIIAIDI---NGEKFPKAKALGATDC 244 (376)
T ss_dssp TTSCCCTTCEEEEE-CCSHHHHHHHHHHHHTTCSEEEEECS---CGGGHHHHHHTTCSEE
T ss_pred HhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCeEEEEcC---CHHHHHHHHHhCCcEE
Confidence 45667788665555 469999999999999998 4444422 3456777888898643
No 129
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=69.68 E-value=42 Score=29.35 Aligned_cols=105 Identities=15% Similarity=0.150 Sum_probs=67.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 150 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 150 (321)
.+|..-.-|+.|.++|..++.+|++++++=+.. .. .....+|++. + +.+ ++.++. +...++-
T Consensus 143 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~-~~---~~~~~~g~~~--~----~l~-------ell~~a-DvV~l~~ 204 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQVAKIANALGMNILLYDPYP-NE---ERAKEVNGKF--V----DLE-------TLLKES-DVVTIHV 204 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-CH---HHHHHTTCEE--C----CHH-------HHHHHC-SEEEECC
T ss_pred ceEEEEccCHHHHHHHHHHHHCCCEEEEECCCC-Ch---hhHhhcCccc--c----CHH-------HHHhhC-CEEEEec
Confidence 567777889999999999999999987775543 22 2345678753 1 122 233443 5565543
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHH--HHHHHHHhc
Q 020805 151 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTIT--GAGKFLKEK 199 (321)
Q Consensus 151 ~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~~a--Gi~~~~k~~ 199 (321)
..++.. ...+..+.++++ +++.+++-+|+|+.+- .+..+++..
T Consensus 205 p~~~~t----~~li~~~~l~~m--k~ga~lin~arg~~vd~~aL~~aL~~g 249 (307)
T 1wwk_A 205 PLVEST----YHLINEERLKLM--KKTAILINTSRGPVVDTNALVKALKEG 249 (307)
T ss_dssp CCSTTT----TTCBCHHHHHHS--CTTCEEEECSCGGGBCHHHHHHHHHHT
T ss_pred CCChHH----hhhcCHHHHhcC--CCCeEEEECCCCcccCHHHHHHHHHhC
Confidence 323321 123445677777 4688999999998754 677777753
No 130
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=69.29 E-value=50 Score=27.73 Aligned_cols=34 Identities=21% Similarity=0.353 Sum_probs=26.7
Q ss_pred CCCCEEEEecCCchhHHHHHHHHHhcC----CCcEEEEEe
Q 020805 174 GRIDALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIE 209 (321)
Q Consensus 174 ~~~d~vv~p~G~Gg~~aGi~~~~k~~~----~~~~vigv~ 209 (321)
++||+||+ .+...+.|+..++++.+ .++.|+|.+
T Consensus 185 ~~~~ai~~--~~d~~a~g~~~al~~~g~~vP~di~vvg~d 222 (291)
T 3egc_A 185 DRPTALLT--SSHRITEGAMQALNVLGLRYGPDVEIVSFD 222 (291)
T ss_dssp CCCSEEEE--SSHHHHHHHHHHHHHHTCCBTTTBEEEEES
T ss_pred CCCcEEEE--CCcHHHHHHHHHHHHcCCCCCCceEEEEec
Confidence 56899886 56677789999999876 357888887
No 131
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=69.14 E-value=30 Score=28.80 Aligned_cols=70 Identities=11% Similarity=0.107 Sum_probs=44.4
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHH
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILA 140 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~ 140 (321)
...+||..+|.-|.++|......|.+++++.... .....+.++..|.++..+..+- +.++..+...+..+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (249)
T 2ew8_A 8 KLAVITGGANGIGRAIAERFAVEGADIAIADLVP-APEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVIS 78 (249)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC-CHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCc-hhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 3678888999999999999989999877765433 1222225667787776665432 23333444444433
No 132
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=69.04 E-value=19 Score=30.72 Aligned_cols=73 Identities=12% Similarity=0.050 Sum_probs=48.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHhC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAKT 142 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~~ 142 (321)
+..|||.+++--|+++|..-...|.+++++-.... -....+.++..|.++..+..+- +.++..+...+..++.
T Consensus 8 KvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 8 KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 37788888888999999998899998776533211 1233556788899888766542 3445555555555554
No 133
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=68.67 E-value=34 Score=28.31 Aligned_cols=55 Identities=20% Similarity=0.193 Sum_probs=40.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecC-CCCH-HHHHHHHHcCCEEEEeCCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA-SMSL-ERRIILRAFGAELVLTDPA 125 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~-~~~~-~~~~~~~~~Ga~v~~~~~~ 125 (321)
..+||..+|.-|.++|..-...|.+++++... .... ...+.++..|.++..+..+
T Consensus 9 ~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D 65 (258)
T 3afn_B 9 RVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAAD 65 (258)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECC
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECC
Confidence 67888888999999999988899998877665 3222 2344566678888766544
No 134
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=68.61 E-value=23 Score=30.14 Aligned_cols=71 Identities=15% Similarity=-0.050 Sum_probs=45.8
Q ss_pred eEEEeeCCCh--HHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHHhC
Q 020805 71 SVLIEPTSGN--TGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 142 (321)
Q Consensus 71 ~~vv~~SsGN--~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 142 (321)
..+||..+|+ -|.++|..-...|.+++++.... ...+++.+...+.++..+..+ .+.++..+...+..++.
T Consensus 28 ~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 101 (280)
T 3nrc_A 28 KILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ-FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVW 101 (280)
T ss_dssp EEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT-CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch-HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHc
Confidence 6677777777 88999998889999877776655 556666665544444444332 23444555556665553
No 135
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=68.60 E-value=17 Score=30.59 Aligned_cols=69 Identities=14% Similarity=0.082 Sum_probs=43.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcC---CeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHH
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQ---YRLIITMPASMSLERRIILRAFGAELVLTDPAK-GMKGAVQKAEEIL 139 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G---~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~ 139 (321)
..+||..+|--|.++|......| .+++++.........++.+...+.++..+..+- +.++..+...++.
T Consensus 23 ~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 95 (267)
T 1sny_A 23 SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIE 95 (267)
T ss_dssp EEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHH
T ss_pred EEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHH
Confidence 67888888999999999988889 888887765443334555554466665554332 2333344444443
No 136
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=68.58 E-value=29 Score=31.20 Aligned_cols=106 Identities=12% Similarity=0.033 Sum_probs=69.5
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 150 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 150 (321)
++|..-.-|+.|.++|..++.+|++++++-+. .+.......|.+. +. +.+ ++.++. +...++-
T Consensus 161 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~----~~~~~~~~~g~~~--~~---~l~-------ell~~a-DiV~l~~ 223 (352)
T 3gg9_A 161 QTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRE----NSKERARADGFAV--AE---SKD-------ALFEQS-DVLSVHL 223 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSH----HHHHHHHHTTCEE--CS---SHH-------HHHHHC-SEEEECC
T ss_pred CEEEEEeECHHHHHHHHHHHhCCCEEEEECCC----CCHHHHHhcCceE--eC---CHH-------HHHhhC-CEEEEec
Confidence 56777788999999999999999998887443 2334556678753 22 222 333444 5555543
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhH--HHHHHHHHhc
Q 020805 151 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI--TGAGKFLKEK 199 (321)
Q Consensus 151 ~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~~--aGi~~~~k~~ 199 (321)
..++.. ...+..+.++++ +++.+++-+|.|+.+ ..+..++++.
T Consensus 224 Plt~~t----~~li~~~~l~~m--k~gailIN~aRg~~vd~~aL~~aL~~g 268 (352)
T 3gg9_A 224 RLNDET----RSIITVADLTRM--KPTALFVNTSRAELVEENGMVTALNRG 268 (352)
T ss_dssp CCSTTT----TTCBCHHHHTTS--CTTCEEEECSCGGGBCTTHHHHHHHHT
T ss_pred cCcHHH----HHhhCHHHHhhC--CCCcEEEECCCchhhcHHHHHHHHHhC
Confidence 323322 123455677777 578999999999876 5667777753
No 137
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=68.38 E-value=36 Score=28.26 Aligned_cols=71 Identities=10% Similarity=0.138 Sum_probs=42.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCe-EEEEecCCCCHHHHHHHHHc--CCEEEEeCCCCC-h-hHHHHHHHHHHHh
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYR-LIITMPASMSLERRIILRAF--GAELVLTDPAKG-M-KGAVQKAEEILAK 141 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~-~~ivvp~~~~~~~~~~~~~~--Ga~v~~~~~~~~-~-~~~~~~a~~~~~~ 141 (321)
...+|+..+|--|.++|......|.+ ++++ ..+......+.++.. +.++..+..+-. . ++..+...+..++
T Consensus 6 k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~-~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (254)
T 1sby_A 6 KNVIFVAALGGIGLDTSRELVKRNLKNFVIL-DRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ 81 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCCSEEEEE-ESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCcEEEEE-ecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHh
Confidence 36788888888999999998899997 5554 333333445555443 556665544322 2 3344444444443
No 138
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=68.24 E-value=48 Score=29.25 Aligned_cols=60 Identities=15% Similarity=0.173 Sum_probs=43.1
Q ss_pred HcCCCCCCCeEEEeeCC-ChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHH----HcCCEEEEeC
Q 020805 62 AKGLITPGESVLIEPTS-GNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILR----AFGAELVLTD 123 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~Ss-GN~g~AlA~aa~~~G~~~~ivvp~~~--~~~~~~~~~----~~Ga~v~~~~ 123 (321)
+.|.+. | .+|+-... +|.+.|++.+++++|++++++.|+.- ++.-++.++ ..|+++..+.
T Consensus 149 ~~g~l~-g-l~va~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~ 215 (315)
T 1pvv_A 149 KKGTIK-G-VKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLH 215 (315)
T ss_dssp HHSCCT-T-CEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred HhCCcC-C-cEEEEECCCcchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 346543 2 34444443 89999999999999999999999864 333334443 7899998876
No 139
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=68.16 E-value=24 Score=30.10 Aligned_cols=72 Identities=11% Similarity=0.021 Sum_probs=48.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
...+||..+|--|.++|......|.+++++-.... .....+.++..|.++..+..+- +.++..+...+..++
T Consensus 33 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 106 (276)
T 3r1i_A 33 KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGE 106 (276)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 36788888899999999999999999887765432 2334556677777776665432 334444555555444
No 140
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=68.04 E-value=50 Score=27.26 Aligned_cols=44 Identities=23% Similarity=0.209 Sum_probs=31.5
Q ss_pred HHHHHhhhCCCCCEEEEecCCchhHHHHHHHHHhcC---CCcEEEEEec
Q 020805 165 GPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN---PNIKLYGIEP 210 (321)
Q Consensus 165 ~~Ei~~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~---~~~~vigv~~ 210 (321)
..+++++-+..||+||+. +...+.|+..++++.+ .++.|+|.+-
T Consensus 170 ~~~~l~~~~~~~~ai~~~--~d~~a~g~~~al~~~g~vp~di~vvg~d~ 216 (272)
T 3o74_A 170 MQQLIDDLGGLPDALVTT--SYVLLQGVFDTLQARPVDSRQLQLGTFGD 216 (272)
T ss_dssp HHHHHHHHTSCCSEEEES--SHHHHHHHHHHHHTSCGGGCCCEEEEESC
T ss_pred HHHHHhcCCCCCcEEEEe--CchHHHHHHHHHHHcCCCccceEEEEeCC
Confidence 345555542269999874 6677889999999887 4678888773
No 141
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=67.86 E-value=31 Score=30.86 Aligned_cols=61 Identities=16% Similarity=0.154 Sum_probs=42.2
Q ss_pred HcCCCCCCCeEEEee-CCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHH----HHcCCEEEEeCC
Q 020805 62 AKGLITPGESVLIEP-TSGNTGIGLAFMAAAKQYRLIITMPASM--SLERRIIL----RAFGAELVLTDP 124 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~-SsGN~g~AlA~aa~~~G~~~~ivvp~~~--~~~~~~~~----~~~Ga~v~~~~~ 124 (321)
+.|.+. | .+|+-. =.+|.+.+++.+++++|++++++.|+.- ++.-++.+ +..|+++..+..
T Consensus 173 ~~G~l~-g-lkva~vGD~~nva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~d 240 (340)
T 4ep1_A 173 ETNTFK-G-IKLAYVGDGNNVCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILHN 240 (340)
T ss_dssp HHSCCT-T-CEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEESC
T ss_pred HhCCCC-C-CEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEECC
Confidence 345543 2 334333 3378999999999999999999999853 34434443 478999888773
No 142
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=67.86 E-value=61 Score=28.17 Aligned_cols=146 Identities=13% Similarity=0.046 Sum_probs=75.4
Q ss_pred HHHHHHHH--cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-----------------------H---
Q 020805 55 SMISDAEA--KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-----------------------L--- 106 (321)
Q Consensus 55 ~~l~~a~~--~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-----------------------~--- 106 (321)
..+..+.+ ++. +.|+..........+.-.+...|+|++.+-..... .
T Consensus 51 ~~i~~~i~~~~~v-----DgiIi~~~~~~~~~~~~~~~~~giPvV~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~D~~~~ 125 (350)
T 3h75_A 51 QQARELFQGRDKP-----DYLMLVNEQYVAPQILRLSQGSGIKLFIVNSPLTLDQRELIGQSRQNYSDWIGSMVGDDEEA 125 (350)
T ss_dssp HHHHHHHHSSSCC-----SEEEEECCSSHHHHHHHHHTTSCCEEEEEESCCCTTTC------------CEEEEECCHHHH
T ss_pred HHHHHHHhcCCCC-----CEEEEeCchhhHHHHHHHHHhCCCcEEEEcCCCChHHHhhhcCCchhccceeeeecCChHHH
Confidence 34555555 354 55666544344444555566789998887533111 0
Q ss_pred --HHHHHHHHcC--------CEEEEeCCCCCh---hHHHHHHHHHHHhCCCeEEc-CCCCCCcchhhhhhchHHHHHhhh
Q 020805 107 --ERRIILRAFG--------AELVLTDPAKGM---KGAVQKAEEILAKTPNAYML-QQFENPANPKIHYETTGPELWKGS 172 (321)
Q Consensus 107 --~~~~~~~~~G--------a~v~~~~~~~~~---~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~Ei~~ql 172 (321)
.-.+.+...| .+|.++.+..+. .++.+-.++..++.+..... ..+.+. ....++. ...+++++-
T Consensus 126 g~~a~~~L~~~g~~~~~g~~~~i~~i~g~~~~~~~~~R~~Gf~~~l~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~L~~~ 203 (350)
T 3h75_A 126 GYRMLKELLHKLGPVPAGHGIELLAFSGLKVTPAAQLRERGLRRALAEHPQVHLRQLVYGEW-NRERAYR-QAQQLLKRY 203 (350)
T ss_dssp HHHHHHHHHHHHCCCCSSCCEEEEEEESCTTSHHHHHHHHHHHHHHHHCTTEEEEEEEECTT-CHHHHHH-HHHHHHHHC
T ss_pred HHHHHHHHHHHhhhhcCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHCCCeEEEEEeeCCC-cHHHHHH-HHHHHHHhC
Confidence 1122333333 477766543221 22333344555555321111 011111 1122332 334555543
Q ss_pred CCCCCEEEEecCCchhHHHHHHHHHhcCC----CcEEEEEec
Q 020805 173 GGRIDALVSGIGTGGTITGAGKFLKEKNP----NIKLYGIEP 210 (321)
Q Consensus 173 ~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~----~~~vigv~~ 210 (321)
+++|+||+. +...+.|+..++++.+- ++.|+|+..
T Consensus 204 -~~~~aI~~~--~d~~a~g~~~al~~~G~~vP~di~vvg~d~ 242 (350)
T 3h75_A 204 -PKTQLVWSA--NDEMALGAMQAARELGRKPGTDLLFSGVNS 242 (350)
T ss_dssp -TTEEEEEES--SHHHHHHHHHHHHHTTCCBTTTBEEEEESC
T ss_pred -CCcCEEEEC--ChHHHHHHHHHHHHcCCCCCCCeEEEecCC
Confidence 568888764 56677799999998763 588888873
No 143
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=67.37 E-value=77 Score=29.12 Aligned_cols=100 Identities=11% Similarity=-0.038 Sum_probs=54.9
Q ss_pred CCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHH--cCCeEEEEecCCCC-------------
Q 020805 41 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAA--KQYRLIITMPASMS------------- 105 (321)
Q Consensus 41 ~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~--~G~~~~ivvp~~~~------------- 105 (321)
..+|.|..+.. ...+....+++.+..|...+||..++--|.+.|.+-+. .|.+++++-.....
T Consensus 34 ~~~p~g~~~~v--~~qi~y~~~~~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~ 111 (418)
T 4eue_A 34 DVHPYGCRREV--LNQIDYCKKAIGFRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNN 111 (418)
T ss_dssp CCCHHHHHHHH--HHHHHHHHHSCCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHH
T ss_pred cCCCccHHHHH--HHHHHHHhccCcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchH
Confidence 44566654422 23344444565555555677777777677773344444 48888776554322
Q ss_pred HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHhC
Q 020805 106 LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAKT 142 (321)
Q Consensus 106 ~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~~ 142 (321)
....+.++..|.++..+..+- +.++..+...+..++.
T Consensus 112 ~~~~~~~~~~g~~~~~~~~Dvtd~~~v~~~v~~i~~~~ 149 (418)
T 4eue_A 112 IFFKEFAKKKGLVAKNFIEDAFSNETKDKVIKYIKDEF 149 (418)
T ss_dssp HHHHHHHHHTTCCEEEEESCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 233345677888877665432 3344445555555554
No 144
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=67.35 E-value=26 Score=29.19 Aligned_cols=73 Identities=11% Similarity=0.137 Sum_probs=48.2
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC-CC-CHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHhC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA-SM-SLERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAKT 142 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~-~~-~~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~~ 142 (321)
...+||..+|--|.++|..-...|.++++.... .. .....+.++..|.++..+..+- +.++..+...+..++.
T Consensus 14 k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 89 (256)
T 3ezl_A 14 RIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEV 89 (256)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhc
Confidence 366777788888899999888899988777633 22 2344566777887777665432 3344555556665554
No 145
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=67.24 E-value=18 Score=30.48 Aligned_cols=74 Identities=11% Similarity=-0.027 Sum_probs=46.1
Q ss_pred CCeEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHHhC
Q 020805 69 GESVLIEPTS--GNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 142 (321)
Q Consensus 69 g~~~vv~~Ss--GN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 142 (321)
++..|||..+ |.-|.++|......|.+++++........+++.+...+.++..+..+ .+.++..+...+..++.
T Consensus 14 ~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 90 (271)
T 3ek2_A 14 GKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHW 90 (271)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3467888866 78899999999899999888766544455555553333334433322 23445555556665554
No 146
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=67.09 E-value=57 Score=28.54 Aligned_cols=104 Identities=10% Similarity=0.095 Sum_probs=66.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 150 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 150 (321)
.+|..-..|+.|.++|..++.+|++++++-+.. ... ..+.+|++. + +.+ ++.++. +...++-
T Consensus 143 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~-~~~---~~~~~g~~~--~----~l~-------ell~~a-DvVvl~~ 204 (313)
T 2ekl_A 143 KTIGIVGFGRIGTKVGIIANAMGMKVLAYDILD-IRE---KAEKINAKA--V----SLE-------ELLKNS-DVISLHV 204 (313)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSC-CHH---HHHHTTCEE--C----CHH-------HHHHHC-SEEEECC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCc-chh---HHHhcCcee--c----CHH-------HHHhhC-CEEEEec
Confidence 567777889999999999999999987775543 222 246678763 1 122 233443 5555543
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHH--HHHHHHHh
Q 020805 151 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTIT--GAGKFLKE 198 (321)
Q Consensus 151 ~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~~a--Gi~~~~k~ 198 (321)
..++.. ...+..+.++++ +++.+++-+|+|+.+- .+..+++.
T Consensus 205 P~~~~t----~~li~~~~l~~m--k~ga~lIn~arg~~vd~~aL~~aL~~ 248 (313)
T 2ekl_A 205 TVSKDA----KPIIDYPQFELM--KDNVIIVNTSRAVAVNGKALLDYIKK 248 (313)
T ss_dssp CCCTTS----CCSBCHHHHHHS--CTTEEEEESSCGGGBCHHHHHHHHHT
T ss_pred cCChHH----HHhhCHHHHhcC--CCCCEEEECCCCcccCHHHHHHHHHc
Confidence 333322 122335667777 4689999999998775 56666664
No 147
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=67.06 E-value=31 Score=29.36 Aligned_cols=70 Identities=14% Similarity=0.024 Sum_probs=46.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHH
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS-MSLERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILA 140 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~-~~~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~ 140 (321)
..+||..+|--|.++|......|.+++++-... ......+.++..|.++..+..+- +.++..+...+..+
T Consensus 35 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 106 (275)
T 4imr_A 35 TALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEA 106 (275)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence 678888888889999999889999887776543 23444566777788877665432 22333444444433
No 148
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=66.94 E-value=28 Score=29.21 Aligned_cols=72 Identities=10% Similarity=-0.014 Sum_probs=45.2
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
...+||..+|.-|.++|......|.+++++...... ....+.++..|.++..+..+- +.++..+...+..++
T Consensus 10 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (260)
T 2ae2_A 10 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH 83 (260)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 367888899999999999988999987776543211 112344556688877665432 233344444444443
No 149
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=66.80 E-value=56 Score=27.34 Aligned_cols=34 Identities=12% Similarity=0.094 Sum_probs=26.1
Q ss_pred CCCCEEEEecCCchhHHHHHHHHHhcC----CCcEEEEEe
Q 020805 174 GRIDALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIE 209 (321)
Q Consensus 174 ~~~d~vv~p~G~Gg~~aGi~~~~k~~~----~~~~vigv~ 209 (321)
++||+||+. +.....|+..++++.+ .++.|+|.+
T Consensus 191 ~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vig~d 228 (292)
T 3k4h_A 191 QPPTAIMAT--DDLIGLGVLSALSKKGFVVPKDVSIVSFN 228 (292)
T ss_dssp SCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEES
T ss_pred CCCcEEEEc--ChHHHHHHHHHHHHhCCCCCCeEEEEEec
Confidence 468999864 5667779999999876 357788876
No 150
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=66.73 E-value=20 Score=32.10 Aligned_cols=54 Identities=22% Similarity=0.198 Sum_probs=40.8
Q ss_pred eEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHH----HcCCEEEEeCC
Q 020805 71 SVLIEPTS--GNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILR----AFGAELVLTDP 124 (321)
Q Consensus 71 ~~vv~~Ss--GN~g~AlA~aa~~~G~~~~ivvp~~~--~~~~~~~~~----~~Ga~v~~~~~ 124 (321)
.+|+-... .|.+.|++.+++++|++++++.|+.- ++.-++.++ ..|+++..+..
T Consensus 156 l~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d 217 (335)
T 1dxh_A 156 ISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTED 217 (335)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEESC
T ss_pred eEEEEecCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEeC
Confidence 44555555 49999999999999999999999853 443444443 78999988863
No 151
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=66.59 E-value=40 Score=25.60 Aligned_cols=96 Identities=11% Similarity=0.046 Sum_probs=57.2
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH---HcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcC
Q 020805 73 LIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILR---AFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQ 149 (321)
Q Consensus 73 vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~---~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 149 (321)
++....|..|..+|......|.+++++-+.. ..+.+.++ ..|.+++.-+
T Consensus 6 vlI~G~G~vG~~la~~L~~~g~~V~vid~~~--~~~~~~~~~~~~~~~~~i~gd-------------------------- 57 (153)
T 1id1_A 6 FIVCGHSILAINTILQLNQRGQNVTVISNLP--EDDIKQLEQRLGDNADVIPGD-------------------------- 57 (153)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEECCC--HHHHHHHHHHHCTTCEEEESC--------------------------
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEECCC--hHHHHHHHHhhcCCCeEEEcC--------------------------
Confidence 5556789999999998888898888876542 23222222 1233332211
Q ss_pred CCCCCcchhhhhhchHHHHHhhhC-CCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEe
Q 020805 150 QFENPANPKIHYETTGPELWKGSG-GRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIE 209 (321)
Q Consensus 150 ~~~~~~~~~~g~~~~~~Ei~~ql~-~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~ 209 (321)
... .+.+++.+ .+.|.|+++++.-..-.-+....|..+|..+++...
T Consensus 58 ----~~~---------~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~ii~~~ 105 (153)
T 1id1_A 58 ----SND---------SSVLKKAGIDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLAV 105 (153)
T ss_dssp ----TTS---------HHHHHHHTTTTCSEEEECSSCHHHHHHHHHHHHHHTSSSCEEEEC
T ss_pred ----CCC---------HHHHHHcChhhCCEEEEecCChHHHHHHHHHHHHHCCCCEEEEEE
Confidence 111 11122211 357888888887666666666777777877777644
No 152
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=66.55 E-value=29 Score=28.82 Aligned_cols=72 Identities=14% Similarity=0.077 Sum_probs=46.4
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
...+||..+|.-|.++|..-...|.+++++-..... ....+.++..|.++..+..+- +.++..+...+..++
T Consensus 10 k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T 3qiv_A 10 KVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE 83 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 367888888999999999999999997776543221 122345566788887776543 233444444444443
No 153
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=66.42 E-value=37 Score=28.62 Aligned_cols=69 Identities=22% Similarity=0.210 Sum_probs=47.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKT 142 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~ 142 (321)
..+||..+|--|.++|..-...|.+++++-.... . ..+.++..+...+.++-. +.++..+...+..++.
T Consensus 29 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~-~-~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~ 97 (260)
T 3gem_A 29 PILITGASQRVGLHCALRLLEHGHRVIISYRTEH-A-SVTELRQAGAVALYGDFS-CETGIMAFIDLLKTQT 97 (260)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCC-H-HHHHHHHHTCEEEECCTT-SHHHHHHHHHHHHHHC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChH-H-HHHHHHhcCCeEEECCCC-CHHHHHHHHHHHHHhc
Confidence 6788888899999999998899999777765443 2 245566678777777653 3445555556655553
No 154
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=66.27 E-value=23 Score=30.22 Aligned_cols=70 Identities=14% Similarity=0.182 Sum_probs=44.6
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHH
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILA 140 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~ 140 (321)
..+||..+|--|.++|......|.+++++...... ....+.++..|.++..+..+- +.++..+...+..+
T Consensus 31 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 103 (283)
T 1g0o_A 31 VALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVK 103 (283)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence 67888888899999999988999987776554321 122345677788777665432 23333344444433
No 155
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=65.98 E-value=25 Score=30.28 Aligned_cols=71 Identities=15% Similarity=0.137 Sum_probs=47.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~--~~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
..+||..+|--|.++|......|.+++++..... .....+.++..|.++..+..+- +.++..+...+..++
T Consensus 49 ~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 49 NVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 6788888899999999999999998877765432 1223445677788887765443 233444444555444
No 156
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=65.96 E-value=45 Score=27.36 Aligned_cols=56 Identities=11% Similarity=0.198 Sum_probs=39.3
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH--HHHHHHHHcCCEEEEeCCC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL--ERRIILRAFGAELVLTDPA 125 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~--~~~~~~~~~Ga~v~~~~~~ 125 (321)
...+||..+|.-|.++|......|.+++++...+... ...+.++..|.++..+..+
T Consensus 6 ~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D 63 (247)
T 2hq1_A 6 KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGD 63 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESC
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECC
Confidence 3678888889999999999999999877763333222 2234556678777766543
No 157
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=65.78 E-value=20 Score=32.24 Aligned_cols=58 Identities=22% Similarity=0.165 Sum_probs=39.2
Q ss_pred HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 020805 60 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 121 (321)
Q Consensus 60 a~~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 121 (321)
+.++..+++|.+.+|. .+|.-|.+++..|+.+|.+++++.. ++.+++.++.+|++.++
T Consensus 186 al~~~~~~~g~~VlV~-GaG~vG~~aiqlak~~Ga~Vi~~~~---~~~~~~~a~~lGa~~vi 243 (369)
T 1uuf_A 186 PLRHWQAGPGKKVGVV-GIGGLGHMGIKLAHAMGAHVVAFTT---SEAKREAAKALGADEVV 243 (369)
T ss_dssp HHHHTTCCTTCEEEEE-CCSHHHHHHHHHHHHTTCEEEEEES---SGGGHHHHHHHTCSEEE
T ss_pred HHHhcCCCCCCEEEEE-CCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCcEEe
Confidence 3333446777665554 5588999999999999998555543 34566677788986544
No 158
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=65.64 E-value=27 Score=29.33 Aligned_cols=71 Identities=15% Similarity=0.059 Sum_probs=44.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
..+||..+|--|.++|......|.+++++-..... ....+.++..|.++..+..+- +.++..+...+..++
T Consensus 31 ~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 103 (262)
T 3rkr_A 31 VAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAA 103 (262)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHh
Confidence 67888888889999999988899997766443221 222345667788887766443 233344444444333
No 159
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=65.63 E-value=27 Score=29.36 Aligned_cols=73 Identities=8% Similarity=0.085 Sum_probs=47.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHhC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAKT 142 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~~ 142 (321)
...+||..+|--|.++|..-...|.+++++...... ....+.++..|.++..+..+- +.++..+...+..++.
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 9 RTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF 84 (259)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 367888888889999999988999998877554432 233455667787776655432 3344455555555543
No 160
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=65.61 E-value=18 Score=32.43 Aligned_cols=55 Identities=15% Similarity=0.187 Sum_probs=38.0
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCe-EEEEecCCCCHHHHHHHHHcCCEEE
Q 020805 62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYR-LIITMPASMSLERRIILRAFGAELV 120 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~-~~ivvp~~~~~~~~~~~~~~Ga~v~ 120 (321)
+...+++|.+.+|. .+|.-|..++..|+.+|.. ++++.+ ++.|++.++.+|++.+
T Consensus 184 ~~~~~~~g~~VlV~-GaG~vG~~avqla~~~Ga~~Vi~~~~---~~~~~~~~~~lGa~~v 239 (373)
T 2fzw_A 184 NTAKLEPGSVCAVF-GLGGVGLAVIMGCKVAGASRIIGVDI---NKDKFARAKEFGATEC 239 (373)
T ss_dssp TTTCCCTTCEEEEE-CCSHHHHHHHHHHHHHTCSEEEEECS---CGGGHHHHHHHTCSEE
T ss_pred hhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCeEEEEcC---CHHHHHHHHHcCCceE
Confidence 45667787665555 4689999999999999984 444422 3456777778887543
No 161
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=65.57 E-value=18 Score=33.17 Aligned_cols=73 Identities=19% Similarity=0.022 Sum_probs=48.3
Q ss_pred CeEEEeeCCChHHHHHHHHHH-HcCCeEEEEecCCCC-------------HHHHHHHHHcCCEEEEeCCCCChhHHHHH-
Q 020805 70 ESVLIEPTSGNTGIGLAFMAA-AKQYRLIITMPASMS-------------LERRIILRAFGAELVLTDPAKGMKGAVQK- 134 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~-~~G~~~~ivvp~~~~-------------~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~- 134 (321)
++.+|+..|...|+|.|.+.+ ..|-..+++.-+..+ ..-.+.++..|.+.+.+..+-..++..+.
T Consensus 51 K~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~v 130 (401)
T 4ggo_A 51 KNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQV 130 (401)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHH
T ss_pred CEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHHH
Confidence 467888888888888888765 679888877654322 12346788899998887765443444444
Q ss_pred HHHHHHhC
Q 020805 135 AEEILAKT 142 (321)
Q Consensus 135 a~~~~~~~ 142 (321)
..++.++.
T Consensus 131 i~~i~~~~ 138 (401)
T 4ggo_A 131 IEEAKKKG 138 (401)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHhc
Confidence 44444443
No 162
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=65.55 E-value=22 Score=29.82 Aligned_cols=70 Identities=11% Similarity=0.103 Sum_probs=43.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC---HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHH
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS---LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILA 140 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~---~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~ 140 (321)
..+||..+|.-|.++|......|.+++++...... ....+.++..|.++..+..+- +.++..+...+..+
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 77 (258)
T 3a28_C 4 VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAE 77 (258)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 67888888999999999988889987776543322 122334555677776665432 22333344444433
No 163
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=65.32 E-value=26 Score=29.21 Aligned_cols=71 Identities=18% Similarity=0.088 Sum_probs=43.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHH
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILA 140 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~ 140 (321)
...+||..+|.-|.++|..-...|.+++++...... ....+.++..|.++..+..+- +.++..+...+..+
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 80 (247)
T 2jah_A 8 KVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVE 80 (247)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 367889999999999999988999987776543211 112334555677776655432 23333344444433
No 164
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=65.28 E-value=24 Score=29.34 Aligned_cols=56 Identities=16% Similarity=0.081 Sum_probs=38.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA 125 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~ 125 (321)
...+|+..+|.-|.++|......|.+++++...... ....+.++..|.++..+..+
T Consensus 14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D 70 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMD 70 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEec
Confidence 367888899999999999988999987776544211 12234556667777665543
No 165
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=65.18 E-value=63 Score=27.38 Aligned_cols=155 Identities=10% Similarity=0.066 Sum_probs=78.3
Q ss_pred hhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHH--HHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 020805 48 VKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGI--GLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA 125 (321)
Q Consensus 48 ~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~--AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~ 125 (321)
|-.+....+-..+.+.|. ..++..+..+... .+--.....++..+|++|...+...++.++..|--++.++..
T Consensus 41 ~~~~~~~gi~~~a~~~g~-----~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~l~~~~iPvV~i~~~ 115 (305)
T 3huu_A 41 FNSDVLNGINQACNVRGY-----STRMTVSENSGDLYHEVKTMIQSKSVDGFILLYSLKDDPIEHLLNEFKVPYLIVGKS 115 (305)
T ss_dssp HHHHHHHHHHHHHHHHTC-----EEEECCCSSHHHHHHHHHHHHHTTCCSEEEESSCBTTCHHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHHHHHHHHHHCCC-----EEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCcCCcHHHHHHHHcCCCEEEECCC
Confidence 333444444455666675 4444334333332 222234456888888887665555667777778888877643
Q ss_pred CC-----------hhHHHHHHHHHHHhCC-CeEEcCCCCCCcc---hhhhhhch------------------HHHHHhhh
Q 020805 126 KG-----------MKGAVQKAEEILAKTP-NAYMLQQFENPAN---PKIHYETT------------------GPELWKGS 172 (321)
Q Consensus 126 ~~-----------~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~---~~~g~~~~------------------~~Ei~~ql 172 (321)
.. +......++.+.+... .-.++....+... ...|+... +.+.++++
T Consensus 116 ~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 195 (305)
T 3huu_A 116 LNYENIIHIDNDNIDAAYQLTQYLYHLGHRHILFLQESGHYAVTEDRSVGFKQYCDDVKISNDCVVIKSMNDLRDFIKQY 195 (305)
T ss_dssp CSSTTCCEEECCHHHHHHHHHHHHHHTTCCSEEEEEESSCBHHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHHHC---
T ss_pred CcccCCcEEEeCHHHHHHHHHHHHHHCCCCeEEEEcCCcccchhHHHHHHHHHHHHHcCCCcccEEecCcHHHHHHHHHh
Confidence 11 1122333334433321 2223322111100 01122111 34443333
Q ss_pred ----CCCCCEEEEecCCchhHHHHHHHHHhcC----CCcEEEEEe
Q 020805 173 ----GGRIDALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIE 209 (321)
Q Consensus 173 ----~~~~d~vv~p~G~Gg~~aGi~~~~k~~~----~~~~vigv~ 209 (321)
.+.||+||+ .+..+..|+..++++.+ .++.|+|.+
T Consensus 196 ~l~~~~~~~ai~~--~nd~~A~g~~~al~~~g~~vP~di~vig~D 238 (305)
T 3huu_A 196 CIDASHMPSVIIT--SDVMLNMQLLNVLYEYQLRIPEDIQTATFN 238 (305)
T ss_dssp -----CCCSEEEE--SSHHHHHHHHHHHHHTTCCTTTTCEEEEES
T ss_pred hhcCCCCCCEEEE--CChHHHHHHHHHHHHcCCCCCcceEEEEEC
Confidence 356898886 46677778899998876 357788876
No 166
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=65.11 E-value=18 Score=30.88 Aligned_cols=74 Identities=16% Similarity=0.030 Sum_probs=48.5
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCCCCC-hhHHHHHHHHHHHhC
Q 020805 69 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDPAKG-MKGAVQKAEEILAKT 142 (321)
Q Consensus 69 g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~~~~~~~-~~~~~~~a~~~~~~~ 142 (321)
|+..|||..++--|+++|..-...|.++++.-.... -....+.++..|.+++.+..+-. .++..+...+..++.
T Consensus 9 gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (255)
T 4g81_D 9 GKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEG 84 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 346788888888999999999999988665422211 12335567788988888775533 344455555555554
No 167
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=65.09 E-value=38 Score=30.34 Aligned_cols=113 Identities=17% Similarity=0.136 Sum_probs=72.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 150 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 150 (321)
++|-.-.-|+-|.++|..++.+|++++++=|...+.... .|++. +. +. .++.++. +...++-
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~-----~g~~~--~~---~l-------~ell~~s-DvV~l~~ 235 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALE-----EGAIY--HD---TL-------DSLLGAS-DIFLIAA 235 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHH-----TTCEE--CS---SH-------HHHHHTC-SEEEECS
T ss_pred CEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhh-----cCCeE--eC---CH-------HHHHhhC-CEEEEec
Confidence 567777889999999999999999988876654443221 15543 22 12 2344444 5665544
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhH--HHHHHHHHhcCCCcEEEEEe
Q 020805 151 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI--TGAGKFLKEKNPNIKLYGIE 209 (321)
Q Consensus 151 ~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~~--aGi~~~~k~~~~~~~vigv~ 209 (321)
-.++.. ...+..+.+.++ +++.+++-++.|+.+ ..+..+++.. .+.-.+.+
T Consensus 236 Plt~~T----~~li~~~~l~~m--k~gailIN~aRG~~vde~aL~~aL~~g--~i~gA~LD 288 (345)
T 4g2n_A 236 PGRPEL----KGFLDHDRIAKI--PEGAVVINISRGDLINDDALIEALRSK--HLFAAGLD 288 (345)
T ss_dssp CCCGGG----TTCBCHHHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHHT--SEEEEEES
T ss_pred CCCHHH----HHHhCHHHHhhC--CCCcEEEECCCCchhCHHHHHHHHHhC--CceEEEec
Confidence 323222 334566788887 579999999999987 5666677642 23444444
No 168
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=65.00 E-value=37 Score=28.76 Aligned_cols=71 Identities=11% Similarity=0.100 Sum_probs=47.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
..|||..+|--|.++|......|.++++....... ....+.++..|.++..+..+- +.++..+...+..++
T Consensus 29 ~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 102 (267)
T 3u5t_A 29 VAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEA 102 (267)
T ss_dssp EEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 67889898999999999988899998876554432 233455677888887665432 334444555555544
No 169
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=64.92 E-value=29 Score=29.36 Aligned_cols=72 Identities=11% Similarity=0.177 Sum_probs=47.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
...+||..+|--|.++|..-...|.++++....... ....+.++..|.++..+..+- +.++..+...+..++
T Consensus 19 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 19 KVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAH 93 (270)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 367888888889999999988999988876554322 233456677888887766443 333444455555444
No 170
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=64.82 E-value=17 Score=31.35 Aligned_cols=72 Identities=18% Similarity=0.005 Sum_probs=41.7
Q ss_pred eEEEeeCCCh--HHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHHhC
Q 020805 71 SVLIEPTSGN--TGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 142 (321)
Q Consensus 71 ~~vv~~SsGN--~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 142 (321)
..|||..+|. -|.++|......|.+++++-.........+.+...+.++..+..+ .+.++..+...+..++.
T Consensus 33 ~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 33 RGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW 107 (293)
T ss_dssp EEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred EEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 6788888877 899999999999999777654422222333333222344444332 23344455555555543
No 171
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=64.59 E-value=58 Score=26.73 Aligned_cols=32 Identities=16% Similarity=0.146 Sum_probs=24.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 101 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp 101 (321)
...+||..+|--|.++|..-...|.+++++-.
T Consensus 15 k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r 46 (247)
T 3i1j_A 15 RVILVTGAARGIGAAAARAYAAHGASVVLLGR 46 (247)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEec
Confidence 36678888888888888888788887665543
No 172
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=64.52 E-value=24 Score=29.19 Aligned_cols=73 Identities=16% Similarity=0.064 Sum_probs=47.4
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHhC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAKT 142 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~~ 142 (321)
...+||..+|.-|.++|......|.+++++...... ....+.++..|.++..+..+- +.++..+...+..++.
T Consensus 6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAEN 80 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 367888888889999999988999998777654322 223445667788777665432 3344445555555443
No 173
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=64.39 E-value=54 Score=27.94 Aligned_cols=72 Identities=10% Similarity=0.095 Sum_probs=48.9
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--------HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHH
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--------LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILA 140 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~--------~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~ 140 (321)
...+||..+|--|.++|..-...|.+++++-..... ....+.++..|.++..+..+- +.++..+...+..+
T Consensus 10 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 89 (285)
T 3sc4_A 10 KTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTVE 89 (285)
T ss_dssp CEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 367888888889999999988899988777655431 234556677888888776543 33444455555544
Q ss_pred h
Q 020805 141 K 141 (321)
Q Consensus 141 ~ 141 (321)
+
T Consensus 90 ~ 90 (285)
T 3sc4_A 90 Q 90 (285)
T ss_dssp H
T ss_pred H
Confidence 4
No 174
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=64.00 E-value=48 Score=25.59 Aligned_cols=81 Identities=12% Similarity=0.149 Sum_probs=35.2
Q ss_pred CCCCHHHHHHHHHcCCEEEEeCCCCChhH-HHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhchHHHHHhhhCCCCCEEE
Q 020805 102 ASMSLERRIILRAFGAELVLTDPAKGMKG-AVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALV 180 (321)
Q Consensus 102 ~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~-~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv 180 (321)
......-.+.+...|+++++...+..... ..+.. +..++.+..+..-+.+-..........+..++.++. +. |.+|
T Consensus 26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~-~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~-G~-dVLV 102 (157)
T 3gxh_A 26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEG-KLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHK-GK-DVLV 102 (157)
T ss_dssp BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHH-HHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTT-TS-CEEE
T ss_pred CCCCHHHHHHHHHcCCCEEEECCCcccccccccHH-HHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcC-CC-CEEE
Confidence 33445556666677777766543211000 00111 122222233333333221111133334444555555 45 8888
Q ss_pred EecCC
Q 020805 181 SGIGT 185 (321)
Q Consensus 181 ~p~G~ 185 (321)
-+.|+
T Consensus 103 nnAgg 107 (157)
T 3gxh_A 103 HCLAN 107 (157)
T ss_dssp ECSBS
T ss_pred ECCCC
Confidence 88875
No 175
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=63.88 E-value=54 Score=28.45 Aligned_cols=160 Identities=8% Similarity=0.029 Sum_probs=81.9
Q ss_pred ceEEEEeCCCCCCCchhhHHHHHHHHHHH-HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC---------
Q 020805 33 ARIAAKLEMMEPCSSVKDRIGYSMISDAE-AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA--------- 102 (321)
Q Consensus 33 ~~v~~K~E~~~ptGS~K~R~a~~~l~~a~-~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~--------- 102 (321)
.++.+.....+|. .+...+.++. ++++ ..|+...+.....+++-.+...++|++.+...
T Consensus 46 ~~l~~~d~~~~~~------~~~~~~~~l~~~~~v-----~~iig~~~s~~~~~~~~~~~~~~iP~v~~~~~~~~~~~~~~ 114 (358)
T 3hut_A 46 VDILYADSRDDAD------QARTIARAFVDDPRV-----VGVLGDFSSTVSMAAGSIYGKEGMPQLSPTAAHPDYIKISP 114 (358)
T ss_dssp EEEEEEECTTCHH------HHHHHHHHHHHCTTE-----EEEEECSSHHHHHHHHHHHHHHTCCEEESSCCCGGGTTSCT
T ss_pred EEEEEecCCCCHH------HHHHHHHHHhccCCc-----EEEEcCCCcHHHHHHHHHHHHCCCcEEecCCCCcccccCCC
Confidence 3555555443332 2333444555 4444 56665555566677777888999998875211
Q ss_pred --------CCCH--HHHHHHHHcCC-EEEEeCCCCCh-hHHHHHHHHHHHhCCCeEEcC-CCCCCcchhhhhhchHHHHH
Q 020805 103 --------SMSL--ERRIILRAFGA-ELVLTDPAKGM-KGAVQKAEEILAKTPNAYMLQ-QFENPANPKIHYETTGPELW 169 (321)
Q Consensus 103 --------~~~~--~~~~~~~~~Ga-~v~~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~Ei~ 169 (321)
+... .-.+.+...|. +|.++..+..+ .+..+..++..++.+...... .+. +.. .-+.....+|.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~l~~~g~~~ia~i~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~-~~~--~~~~~~~~~l~ 191 (358)
T 3hut_A 115 WQFRAITTPAFEGPNNAAWMIGDGFTSVAVIGVTTDWGLSSAQAFRKAFELRGGAVVVNEEVP-PGN--RRFDDVIDEIE 191 (358)
T ss_dssp TEEESSCCGGGHHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEEEC-TTC--CCCHHHHHHHH
T ss_pred eEEEecCChHHHHHHHHHHHHHcCCCEEEEEecCcHHHHHHHHHHHHHHHHcCCEEEEEEecC-CCC--ccHHHHHHHHH
Confidence 0111 22344555574 55555432211 123333344445542222110 110 000 01122222332
Q ss_pred hhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEec
Q 020805 170 KGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEP 210 (321)
Q Consensus 170 ~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~~ 210 (321)
+ .+||.||++ +.+..+.++.+.+++.+.++++++...
T Consensus 192 ~---~~~d~i~~~-~~~~~a~~~~~~~~~~g~~~p~~~~~~ 228 (358)
T 3hut_A 192 D---EAPQAIYLA-MAYEDAAPFLRALRARGSALPVYGSSA 228 (358)
T ss_dssp H---HCCSEEEEE-SCHHHHHHHHHHHHHTTCCCCEEECGG
T ss_pred h---cCCCEEEEc-cCchHHHHHHHHHHHcCCCCcEEecCc
Confidence 2 358988776 556678899999999888788877653
No 176
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=63.48 E-value=30 Score=29.39 Aligned_cols=72 Identities=14% Similarity=0.133 Sum_probs=45.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
...+||..+|--|.++|......|.+++++-..... ....+.++..|.++..+..+- +.++..+...+..++
T Consensus 5 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 78 (264)
T 3tfo_A 5 KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDT 78 (264)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 367888888889999999988999997776443211 222345666788887765432 333444444544444
No 177
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=63.37 E-value=36 Score=29.66 Aligned_cols=71 Identities=18% Similarity=0.157 Sum_probs=47.5
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecC-----------CCCHHHHHHHHHcCCEEEEeCCCCC-hhHHHHHHHHH
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA-----------SMSLERRIILRAFGAELVLTDPAKG-MKGAVQKAEEI 138 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~-----------~~~~~~~~~~~~~Ga~v~~~~~~~~-~~~~~~~a~~~ 138 (321)
..+||..+|--|.++|..-...|.+++++-.. .......+.++..|.++..+..+-. .++..+...+.
T Consensus 29 ~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 108 (322)
T 3qlj_A 29 VVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQTA 108 (322)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 66888888888899999888899988877432 1123345567778999988876432 33444445555
Q ss_pred HHh
Q 020805 139 LAK 141 (321)
Q Consensus 139 ~~~ 141 (321)
.++
T Consensus 109 ~~~ 111 (322)
T 3qlj_A 109 VET 111 (322)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 178
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=63.21 E-value=27 Score=29.52 Aligned_cols=72 Identities=18% Similarity=0.103 Sum_probs=45.2
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
...+||..+|--|.++|......|.+++++...... ....+.++..|.++..+..+- +.++..+...+..++
T Consensus 32 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 105 (272)
T 1yb1_A 32 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE 105 (272)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 367888888999999999988999987776543211 122334566677776665432 233344444554444
No 179
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=62.88 E-value=30 Score=29.24 Aligned_cols=71 Identities=15% Similarity=0.128 Sum_probs=46.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
..+||..+|.-|.++|......|.+++++...... ....+.++..|.++..+..+. +.++..+...++.++
T Consensus 31 ~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 104 (271)
T 4iin_A 31 NVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS 104 (271)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 67888888889999999988999998877664322 223445677788877665442 233444445555444
No 180
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=62.79 E-value=70 Score=27.10 Aligned_cols=29 Identities=7% Similarity=0.189 Sum_probs=18.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEE
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIIT 99 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~iv 99 (321)
..|||..+|--|.++|..-...|.+++++
T Consensus 14 ~vlITGas~GIG~~~a~~L~~~G~~V~~~ 42 (311)
T 3o26_A 14 CAVVTGGNKGIGFEICKQLSSNGIMVVLT 42 (311)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEE
Confidence 56777777777777776665666654444
No 181
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=62.63 E-value=22 Score=30.31 Aligned_cols=72 Identities=11% Similarity=0.038 Sum_probs=46.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC---------CHH----HHHHHHHcCCEEEEeCCCC-ChhHHHHHH
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM---------SLE----RRIILRAFGAELVLTDPAK-GMKGAVQKA 135 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~---------~~~----~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a 135 (321)
...+||..+|--|.++|......|.+++++-.... ... ..+.++..|.++..+..+- +.++..+..
T Consensus 11 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 90 (281)
T 3s55_A 11 KTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESFV 90 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 36788888888999999999999999777755321 122 2345567788887766442 333444445
Q ss_pred HHHHHh
Q 020805 136 EEILAK 141 (321)
Q Consensus 136 ~~~~~~ 141 (321)
.+..++
T Consensus 91 ~~~~~~ 96 (281)
T 3s55_A 91 AEAEDT 96 (281)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 554443
No 182
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=62.62 E-value=10 Score=32.09 Aligned_cols=25 Identities=12% Similarity=0.194 Sum_probs=22.8
Q ss_pred CChHHHHHHHHHHHcCCeEEEEecC
Q 020805 78 SGNTGIGLAFMAAAKQYRLIITMPA 102 (321)
Q Consensus 78 sGN~g~AlA~aa~~~G~~~~ivvp~ 102 (321)
||-.|.++|.++...|..++++...
T Consensus 28 SG~mG~aiA~~~~~~Ga~V~lv~~~ 52 (232)
T 2gk4_A 28 TGHLGKIITETLLSAGYEVCLITTK 52 (232)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 8999999999999999999988754
No 183
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=62.59 E-value=29 Score=30.03 Aligned_cols=71 Identities=15% Similarity=0.085 Sum_probs=45.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
..+||..+|--|.++|......|.+++++-..... ....+.++..|.++..+..+- +.++..+...+..++
T Consensus 33 ~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (301)
T 3tjr_A 33 AAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRL 105 (301)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 67888888999999999999999987776543221 122345566787777665432 333444444444443
No 184
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=62.45 E-value=53 Score=29.40 Aligned_cols=115 Identities=15% Similarity=0.141 Sum_probs=73.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 150 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 150 (321)
++|-.-.-|+.|.++|..++.+|++++++-+...+.. ....+|++. +. +. .++.++. +...++-
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~---~~~~~g~~~--~~---~l-------~ell~~a-DvV~l~~ 228 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPE---LEKETGAKF--VE---DL-------NEMLPKC-DVIVINM 228 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHH---HHHHHCCEE--CS---CH-------HHHGGGC-SEEEECS
T ss_pred CEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHH---HHHhCCCeE--cC---CH-------HHHHhcC-CEEEECC
Confidence 5677788899999999999999999777655443433 334457643 22 12 2344444 5565543
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhH--HHHHHHHHhcCCCcEEEEEe
Q 020805 151 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI--TGAGKFLKEKNPNIKLYGIE 209 (321)
Q Consensus 151 ~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~~--aGi~~~~k~~~~~~~vigv~ 209 (321)
-.++.. ...+..+.++++ +++.+++-++.|+.+ ..+..++++. .+.-.+.+
T Consensus 229 Plt~~t----~~li~~~~l~~m--k~gailIN~aRG~~vde~aL~~aL~~g--~i~ga~lD 281 (351)
T 3jtm_A 229 PLTEKT----RGMFNKELIGKL--KKGVLIVNNARGAIMERQAVVDAVESG--HIGGYSGD 281 (351)
T ss_dssp CCCTTT----TTCBSHHHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHHT--SEEEEEES
T ss_pred CCCHHH----HHhhcHHHHhcC--CCCCEEEECcCchhhCHHHHHHHHHhC--CccEEEeC
Confidence 323322 233556788887 579999999999976 5666677652 34444454
No 185
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=62.33 E-value=24 Score=29.60 Aligned_cols=72 Identities=11% Similarity=0.046 Sum_probs=45.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
...+||..+|--|.++|..-...|.+++++-..... ....+.++..|.++..+..+- +.++..+...+..++
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 86 (256)
T 3gaf_A 13 AVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQ 86 (256)
T ss_dssp CEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 367888888889999999888889997766543221 223445667788887665432 233444444444443
No 186
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=62.16 E-value=8.2 Score=31.51 Aligned_cols=28 Identities=14% Similarity=0.075 Sum_probs=25.7
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 020805 73 LIEPTSGNTGIGLAFMAAAKQYRLIITM 100 (321)
Q Consensus 73 vv~~SsGN~g~AlA~aa~~~G~~~~ivv 100 (321)
|+...+|-.|.++|+..++.|++++||=
T Consensus 5 V~IIGaGpaGL~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 5 IAIIGTGIAGLSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEECcCHHHHHHHHHHHHCCCCEEEEE
Confidence 6778999999999999999999999984
No 187
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=62.16 E-value=31 Score=30.75 Aligned_cols=51 Identities=22% Similarity=0.289 Sum_probs=36.5
Q ss_pred CCCeEEEeeCCChHHHHHHHHHHH-cCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 020805 68 PGESVLIEPTSGNTGIGLAFMAAA-KQYRLIITMPASMSLERRIILRAFGAELVL 121 (321)
Q Consensus 68 ~g~~~vv~~SsGN~g~AlA~aa~~-~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~ 121 (321)
+|...+|...+|.-|.+++..|+. .|.+++++.+ ++.|++.++.+|++.++
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~---~~~~~~~~~~lGad~vi 222 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATAS---RPETQEWVKSLGAHHVI 222 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECS---SHHHHHHHHHTTCSEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeC---CHHHHHHHHHcCCCEEE
Confidence 564555555589999998888987 4877666533 45778888888887554
No 188
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=62.13 E-value=46 Score=30.96 Aligned_cols=51 Identities=12% Similarity=-0.164 Sum_probs=38.8
Q ss_pred hHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 020805 50 DRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITM 100 (321)
Q Consensus 50 ~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivv 100 (321)
-+|..+.+..+.+.......+.+|+....||-|..+|.....+|.+++.+.
T Consensus 215 g~Gv~~~~~~~~~~~~~~l~Gk~vaVQG~GnVG~~aa~~L~e~GakvVavs 265 (450)
T 4fcc_A 215 GYGLVYFTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITAS 265 (450)
T ss_dssp HHHHHHHHHHHHHHTTCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred eeeHHHHHHHHHHHcCCCcCCCEEEEeCCChHHHHHHHHHHhcCCeEEEEe
Confidence 357777777776543334445778889999999999999999999887654
No 189
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=62.12 E-value=38 Score=28.49 Aligned_cols=73 Identities=14% Similarity=0.064 Sum_probs=47.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHH----HHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHhC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLER----RIILRAFGAELVLTDPAK-GMKGAVQKAEEILAKT 142 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~----~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~~ 142 (321)
...+||..++--|.++|......|.+++++........+ .+.++..|.++..+..+- +.++..+...+..++.
T Consensus 12 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 89 (262)
T 3ksu_A 12 KVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF 89 (262)
T ss_dssp CEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 367888888888889998888889988877544333222 345566788888776543 3344455555555543
No 190
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=62.10 E-value=25 Score=31.00 Aligned_cols=51 Identities=16% Similarity=0.136 Sum_probs=35.9
Q ss_pred CCCCCCeEEEeeCCChHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 020805 65 LITPGESVLIEPTSGNTGIGLAFMAAAK--QYRLIITMPASMSLERRIILRAFGAELV 120 (321)
Q Consensus 65 ~~~~g~~~vv~~SsGN~g~AlA~aa~~~--G~~~~ivvp~~~~~~~~~~~~~~Ga~v~ 120 (321)
.+ +|.+.+|.. +|.-|.+++..|+.+ |.+++++. .++.|++.++.+|++.+
T Consensus 168 ~~-~g~~VlV~G-aG~vG~~aiqlak~~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~v 220 (344)
T 2h6e_A 168 KF-AEPVVIVNG-IGGLAVYTIQILKALMKNITIVGIS---RSKKHRDFALELGADYV 220 (344)
T ss_dssp TC-SSCEEEEEC-CSHHHHHHHHHHHHHCTTCEEEEEC---SCHHHHHHHHHHTCSEE
T ss_pred CC-CCCEEEEEC-CCHHHHHHHHHHHHhcCCCEEEEEe---CCHHHHHHHHHhCCCEE
Confidence 35 675555544 489999988999998 98744442 24677888888888543
No 191
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=62.05 E-value=29 Score=29.49 Aligned_cols=72 Identities=11% Similarity=0.082 Sum_probs=44.6
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHhC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAKT 142 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~~ 142 (321)
..+||..+|.-|.++|......|.+++++...... ....+.++..|.++..+..+- +.++..+...+..++.
T Consensus 24 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 97 (277)
T 2rhc_B 24 VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY 97 (277)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHh
Confidence 67888899999999999998999987776543211 112344555677776554432 2333444444444443
No 192
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=62.02 E-value=32 Score=28.92 Aligned_cols=73 Identities=12% Similarity=0.070 Sum_probs=47.3
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHhC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAKT 142 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~~ 142 (321)
...+||..+|--|.++|..-...|.+++++-..... ....+.++..|.++..+..+- +.++..+...+..++.
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 12 KVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAY 86 (264)
T ss_dssp CEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 367888888999999999999999997776543211 122345566788877665432 3344455555555553
No 193
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=61.76 E-value=38 Score=28.71 Aligned_cols=72 Identities=13% Similarity=0.091 Sum_probs=47.3
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~--~~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
...|||..+|--|.++|......|.++++...... .....+.++..|.++..+..+- +.++..+...+..++
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (271)
T 3v2g_A 32 KTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA 106 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 36788888888999999998899999777644432 1233455677788887665443 333444445555444
No 194
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=61.66 E-value=42 Score=29.80 Aligned_cols=103 Identities=12% Similarity=0.061 Sum_probs=67.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 150 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 150 (321)
.+|..-.-|+-|.++|..++.+|++++++=+...+. . ...|.+. ++ . .++.++. +...++-
T Consensus 142 ~tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~----~~~g~~~--~~----l-------~ell~~a-DvV~l~~ 202 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKRED-L----KEKGCVY--TS----L-------DELLKES-DVISLHV 202 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH-H----HHTTCEE--CC----H-------HHHHHHC-SEEEECC
T ss_pred ceEEEECcCHHHHHHHHHHHHCcCEEEEECCCcchh-h----HhcCcee--cC----H-------HHHHhhC-CEEEEeC
Confidence 467777889999999999999999988886554322 1 1356653 11 1 2344444 5665544
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhH--HHHHHHHHh
Q 020805 151 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI--TGAGKFLKE 198 (321)
Q Consensus 151 ~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~~--aGi~~~~k~ 198 (321)
-.++.. ...+..+.++++ ++..+++-+|.|+.+ ..+..++++
T Consensus 203 P~t~~t----~~li~~~~l~~m--k~gailIN~aRg~~vd~~aL~~aL~~ 246 (334)
T 2pi1_A 203 PYTKET----HHMINEERISLM--KDGVYLINTARGKVVDTDALYRAYQR 246 (334)
T ss_dssp CCCTTT----TTCBCHHHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred CCChHH----HHhhCHHHHhhC--CCCcEEEECCCCcccCHHHHHHHHHh
Confidence 333332 233456778887 579999999999975 556666654
No 195
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=61.41 E-value=59 Score=28.84 Aligned_cols=104 Identities=17% Similarity=0.130 Sum_probs=67.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 150 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 150 (321)
++|..-.-|+-|.++|..++.+|++++++-|.. +.. ....+|++. . +. .++.++. +...+.-
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~---~~~~~g~~~--~----~l-------~ell~~a-DvV~l~~ 227 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSFGMKTIGYDPII-SPE---VSASFGVQQ--L----PL-------EEIWPLC-DFITVHT 227 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSS-CHH---HHHHTTCEE--C----CH-------HHHGGGC-SEEEECC
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCCc-chh---hhhhcCcee--C----CH-------HHHHhcC-CEEEEec
Confidence 567777889999999999999999987775543 222 355678763 1 12 2333444 5555543
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHH--HHHHHHHh
Q 020805 151 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTIT--GAGKFLKE 198 (321)
Q Consensus 151 ~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~~a--Gi~~~~k~ 198 (321)
..++.. ...+..++++++ +++.+++-+|+|+.+- .+..+++.
T Consensus 228 P~t~~t----~~li~~~~l~~m--k~gailIN~arg~vvd~~aL~~aL~~ 271 (335)
T 2g76_A 228 PLLPST----TGLLNDNTFAQC--KKGVRVVNCARGGIVDEGALLRALQS 271 (335)
T ss_dssp CCCTTT----TTSBCHHHHTTS--CTTEEEEECSCTTSBCHHHHHHHHHH
T ss_pred CCCHHH----HHhhCHHHHhhC--CCCcEEEECCCccccCHHHHHHHHHh
Confidence 333322 122345677777 5789999999998764 66777765
No 196
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=61.01 E-value=57 Score=26.88 Aligned_cols=56 Identities=14% Similarity=0.065 Sum_probs=40.9
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPA 125 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~~~~~ 125 (321)
...+||..+|--|.++|..-...|.+++++...+.. ....+.++..|.++..+..+
T Consensus 8 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 65 (255)
T 3icc_A 8 KVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGAN 65 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecC
Confidence 367788888888999999988999988876555432 23345667788888877654
No 197
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=60.82 E-value=22 Score=30.47 Aligned_cols=71 Identities=15% Similarity=0.237 Sum_probs=46.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
..+||..+|--|.++|..-...|.+++++...+.. ....+.++..|.++..+..+- +.++..+...+..++
T Consensus 31 ~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (280)
T 4da9_A 31 VAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAE 104 (280)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 67888888889999999988999998877543321 223445667788887665432 334445555555444
No 198
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=60.82 E-value=35 Score=28.94 Aligned_cols=71 Identities=15% Similarity=0.135 Sum_probs=46.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~--~~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
..+||..+|--|.++|..-...|.++++....+. .....+.++..|.++..+..+- +.++..+...+..++
T Consensus 30 ~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~ 103 (269)
T 4dmm_A 30 IALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIER 103 (269)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 6788888888999999998899999887665332 2233455677788887665443 233444444555444
No 199
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=60.66 E-value=39 Score=32.06 Aligned_cols=60 Identities=13% Similarity=-0.000 Sum_probs=43.5
Q ss_pred CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe-cCCC---------------CHHHHHHHHHcCCEEEEeCCC
Q 020805 66 ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITM-PASM---------------SLERRIILRAFGAELVLTDPA 125 (321)
Q Consensus 66 ~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivv-p~~~---------------~~~~~~~~~~~Ga~v~~~~~~ 125 (321)
+++++..+||..+|--|.++|..-...|.+.++++ ..+. .....+.++..|+++..+..+
T Consensus 248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~D 323 (525)
T 3qp9_A 248 WQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCD 323 (525)
T ss_dssp SCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECC
T ss_pred ecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECC
Confidence 44556778888888888899888778899877766 4432 234466778889999877654
No 200
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=60.48 E-value=26 Score=28.99 Aligned_cols=56 Identities=9% Similarity=0.074 Sum_probs=38.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA 125 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~ 125 (321)
...+||..+|.-|.++|..-...|.+++++...... ....+.++..|.++..+..+
T Consensus 12 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D 68 (255)
T 1fmc_A 12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCD 68 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcC
Confidence 367888888999999999988889987776543211 12234455667777666543
No 201
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=60.48 E-value=34 Score=28.92 Aligned_cols=72 Identities=13% Similarity=-0.026 Sum_probs=44.4
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
...+||..+|--|.++|......|.+++++-..... ....+.++..|.++..+..+- +.++..+...+..++
T Consensus 22 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 95 (273)
T 1ae1_A 22 TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV 95 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 367888899999999999999999987776543211 112334555677776554432 233344444444443
No 202
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=60.20 E-value=53 Score=28.25 Aligned_cols=46 Identities=15% Similarity=0.093 Sum_probs=30.4
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAEL 119 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v 119 (321)
+++..-..|+.|.++|..++.+|.+++++-+. ..+.+.++.+|++.
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~---~~~~~~~~~~g~~~ 201 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGARE---SDLLARIAEMGMEP 201 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHTTSEE
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEECC---HHHHHHHHHCCCee
Confidence 45666677888888888888888866655432 23444455677764
No 203
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=59.86 E-value=70 Score=26.66 Aligned_cols=71 Identities=11% Similarity=0.068 Sum_probs=42.9
Q ss_pred CeEEEeeCCCh--HHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCC-EEE--EeCCCCChhHHHHHHHHHHHh
Q 020805 70 ESVLIEPTSGN--TGIGLAFMAAAKQYRLIITMPASMSLERRI-ILRAFGA-ELV--LTDPAKGMKGAVQKAEEILAK 141 (321)
Q Consensus 70 ~~~vv~~SsGN--~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~-~~~~~Ga-~v~--~~~~~~~~~~~~~~a~~~~~~ 141 (321)
...+||..+|. -|.++|..-...|.+++++..........+ ..+.++. ++. .++-. +.++..+...+..++
T Consensus 8 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 8 RNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVT-NDAEIETCFASIKEQ 84 (266)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCS-SSHHHHHHHHHHHHH
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCC-CHHHHHHHHHHHHHH
Confidence 36688888877 899999998899999877755433333333 3344444 344 44432 334455555555544
No 204
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=59.70 E-value=37 Score=28.54 Aligned_cols=71 Identities=20% Similarity=0.125 Sum_probs=46.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
..+||..+|--|.++|......|.++++....+.. ....+.++..|.++..+..+- +.++..+...+..++
T Consensus 28 ~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 101 (267)
T 4iiu_A 28 SVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQ 101 (267)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 66888888889999999999999998776655432 233556667777777665432 333444444544444
No 205
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=59.68 E-value=64 Score=28.35 Aligned_cols=105 Identities=16% Similarity=0.081 Sum_probs=66.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEec-CCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMP-ASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQ 149 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp-~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 149 (321)
++|..-.-|+.|.++|..++.+|++++++-+ .. ... ....+|++. +. +.+ ++.++- +...++
T Consensus 147 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~-~~~---~~~~~g~~~--~~---~l~-------ell~~a-DvVil~ 209 (320)
T 1gdh_A 147 KTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRA-SSS---DEASYQATF--HD---SLD-------SLLSVS-QFFSLN 209 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCC-CHH---HHHHHTCEE--CS---SHH-------HHHHHC-SEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCc-Chh---hhhhcCcEE--cC---CHH-------HHHhhC-CEEEEe
Confidence 4677778899999999999999998877755 33 222 344568753 21 122 233443 555554
Q ss_pred CCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhH--HHHHHHHHh
Q 020805 150 QFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI--TGAGKFLKE 198 (321)
Q Consensus 150 ~~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~~--aGi~~~~k~ 198 (321)
-..++.. ...+..+.++.+ +++.+++-+|+|+.+ ..+..+++.
T Consensus 210 ~p~~~~t----~~~i~~~~l~~m--k~gailIn~arg~~vd~~aL~~aL~~ 254 (320)
T 1gdh_A 210 APSTPET----RYFFNKATIKSL--PQGAIVVNTARGDLVDNELVVAALEA 254 (320)
T ss_dssp CCCCTTT----TTCBSHHHHTTS--CTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred ccCchHH----HhhcCHHHHhhC--CCCcEEEECCCCcccCHHHHHHHHHh
Confidence 3333322 122334566776 578999999999764 467777775
No 206
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=59.66 E-value=47 Score=27.97 Aligned_cols=71 Identities=15% Similarity=0.116 Sum_probs=47.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
..+||..+|.-|.++|......|.++++....+.. ....+.++..|.++..+..+- +.++..+...+..++
T Consensus 28 ~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 101 (272)
T 4e3z_A 28 VVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQ 101 (272)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 67888888899999999999999998776444322 223445677788888776543 233444444555444
No 207
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=59.65 E-value=37 Score=30.61 Aligned_cols=45 Identities=9% Similarity=0.045 Sum_probs=35.2
Q ss_pred hHHHHHHHHHHHcCCeEEEEecC-C--CCHHHHHHH----HHcCCEEEEeCC
Q 020805 80 NTGIGLAFMAAAKQYRLIITMPA-S--MSLERRIIL----RAFGAELVLTDP 124 (321)
Q Consensus 80 N~g~AlA~aa~~~G~~~~ivvp~-~--~~~~~~~~~----~~~Ga~v~~~~~ 124 (321)
|.+.+++.++.++|++++++.|+ . .++.-++.+ +..|+.+..+..
T Consensus 207 rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~a~~~g~~v~~~~d 258 (359)
T 1zq6_A 207 AVANSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSHD 258 (359)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEEEECC
T ss_pred chHHHHHHHHHHcCCEEEEEcCccccCCCHHHHHHHHHHHHHcCCeEEEECC
Confidence 89999999999999999999998 4 333334433 377999988773
No 208
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=59.64 E-value=39 Score=28.37 Aligned_cols=72 Identities=17% Similarity=0.223 Sum_probs=46.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
...+||..+|--|.++|..-...|.++++....+.. ....+.++..|.++..+..+- +.++..+...+..++
T Consensus 5 k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (258)
T 3oid_A 5 KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDET 79 (258)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 367888888889999999988999998876444322 223445666788887665442 233444444444443
No 209
>3snr_A Extracellular ligand-binding receptor; structural genomics, APC102214, PSI-biology, midwest center structural genomics, MCSG; HET: MSE TYR PHE; 1.49A {Rhodopseudomonas palustris} PDB: 3uk0_A* 3t23_A* 3ukj_A* 4eyo_A* 4eyq_A* 3tx6_A* 4f8j_A* 4fb4_A*
Probab=59.50 E-value=85 Score=26.97 Aligned_cols=145 Identities=10% Similarity=0.047 Sum_probs=77.0
Q ss_pred HHHHHHHHHc-CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-------------CC-----HHHHHHHHH
Q 020805 54 YSMISDAEAK-GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS-------------MS-----LERRIILRA 114 (321)
Q Consensus 54 ~~~l~~a~~~-g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~-------------~~-----~~~~~~~~~ 114 (321)
...+.++.++ ++ ..|+...+.....+++-.+...++|.+.+.... .+ ..-.+.+..
T Consensus 58 ~~~~~~l~~~~~v-----~~iig~~~s~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 132 (362)
T 3snr_A 58 TTNARRFVTESKA-----DVIMGSSVTPPSVAISNVANEAQIPHIALAPLPITPERAKWSVVMPQPIPIMGKVLYEHMKK 132 (362)
T ss_dssp HHHHHHHHHTSCC-----SEEEECSSHHHHHHHHHHHHHHTCCEEESSCCCCCTTTTTTEEECSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCc-----eEEEcCCCcHHHHHHHHHHHHcCccEEEecCCccccCCCCcEEecCCChHHHHHHHHHHHHh
Confidence 3345555555 55 567766555666677778889999988754210 01 122345566
Q ss_pred cCC-EEEEeCCCCCh-hHHHHHHHHHHHhCCCeEEc-CCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHH
Q 020805 115 FGA-ELVLTDPAKGM-KGAVQKAEEILAKTPNAYML-QQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITG 191 (321)
Q Consensus 115 ~Ga-~v~~~~~~~~~-~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~~aG 191 (321)
+|. +|.++..+..+ .+..+..++..++.+..... ..+. +.. ..+.....+|.+ .+||+||+. +.+....+
T Consensus 133 ~g~~~ia~i~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~-~~~--~~~~~~~~~l~~---~~~dav~~~-~~~~~a~~ 205 (362)
T 3snr_A 133 NNVKTVGYIGYSDSYGDLWFNDLKKQGEAMGLKIVGEERFA-RPD--TSVAGQALKLVA---ANPDAILVG-ASGTAAAL 205 (362)
T ss_dssp TTCCEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEEEC-TTC--SCCHHHHHHHHH---HCCSEEEEE-CCHHHHHH
T ss_pred cCCCEEEEEecCchHHHHHHHHHHHHHHHcCCEEEEEeecC-CCC--CCHHHHHHHHHh---cCCCEEEEe-cCcchHHH
Confidence 774 55555432221 22333344445555322211 1111 000 011122223322 358988775 46778889
Q ss_pred HHHHHHhcCCCcEEEEEec
Q 020805 192 AGKFLKEKNPNIKLYGIEP 210 (321)
Q Consensus 192 i~~~~k~~~~~~~vigv~~ 210 (321)
+.+.+++.+-+++++++..
T Consensus 206 ~~~~~~~~g~~~p~i~~~g 224 (362)
T 3snr_A 206 PQTTLRERGYNGLIYQTHG 224 (362)
T ss_dssp HHHHHHHTTCCSEEEECGG
T ss_pred HHHHHHHcCCCccEEeccC
Confidence 9999999888778766553
No 210
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=59.49 E-value=31 Score=29.41 Aligned_cols=71 Identities=13% Similarity=0.063 Sum_probs=45.4
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
..+||..+|--|.++|..-...|.+++++-..... ....+.++..|.++..+..+- +.++..+...+..++
T Consensus 26 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (279)
T 3sju_A 26 TAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVER 98 (279)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 67888888999999999988899997766543211 223445666788877665432 233444444544444
No 211
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=59.47 E-value=79 Score=26.61 Aligned_cols=43 Identities=14% Similarity=-0.038 Sum_probs=30.7
Q ss_pred HHHHHhhhC--CCCCEEEEecCCchhHHHHHHHHHhcC----CCcEEEEEe
Q 020805 165 GPELWKGSG--GRIDALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIE 209 (321)
Q Consensus 165 ~~Ei~~ql~--~~~d~vv~p~G~Gg~~aGi~~~~k~~~----~~~~vigv~ 209 (321)
..+++++.+ ..||+||+ .+..++.|+..++++.+ .++.|+|.+
T Consensus 180 ~~~~l~~~~~~~~~~ai~~--~~d~~A~g~~~al~~~g~~vP~di~vig~D 228 (295)
T 3hcw_A 180 MQNLHTRLKDPNIKQAIIS--LDAMLHLAILSVLYELNIEIPKDVMTATFN 228 (295)
T ss_dssp HHHHHHHHTCTTSCEEEEE--SSHHHHHHHHHHHHHTTCCTTTTEEEEEEC
T ss_pred HHHHHhhcccCCCCcEEEE--CChHHHHHHHHHHHHcCCCCCCceEEEEeC
Confidence 345555542 36898886 56677889999999876 357888877
No 212
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=59.25 E-value=35 Score=28.54 Aligned_cols=71 Identities=13% Similarity=0.025 Sum_probs=43.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHH
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILA 140 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~ 140 (321)
...+||..+|--|.++|..-...|.+++++...... ....+.++..|.++..+..+- +.++..+...+..+
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (260)
T 2qq5_A 6 QVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDR 78 (260)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 367888888889999999988899987776443211 112334555688877665432 23333444444433
No 213
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=59.22 E-value=44 Score=31.33 Aligned_cols=60 Identities=22% Similarity=0.185 Sum_probs=41.9
Q ss_pred CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-----HHHHHHHHHcCCEEEEeCCC
Q 020805 66 ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-----LERRIILRAFGAELVLTDPA 125 (321)
Q Consensus 66 ~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-----~~~~~~~~~~Ga~v~~~~~~ 125 (321)
+.+++..+||..+|.-|.++|......|.+-++++..+.+ ....+.++..|+++..+..+
T Consensus 223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~D 287 (486)
T 2fr1_A 223 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACD 287 (486)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeC
Confidence 3456678899999999999999887889974444433221 23345678889998877654
No 214
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=59.21 E-value=19 Score=30.30 Aligned_cols=72 Identities=21% Similarity=0.233 Sum_probs=44.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
...+||..+|--|.++|......|.+++++-..... ....+.++..|.++..+..+- +.++..+...+..++
T Consensus 7 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (257)
T 3imf_A 7 KVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEK 80 (257)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 366888888888999999988999987766443211 122334455677777665432 233444444555444
No 215
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=59.18 E-value=37 Score=28.31 Aligned_cols=71 Identities=10% Similarity=0.068 Sum_probs=43.6
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
..+||..+|.-|.++|..-...|.+++++...... ....+.++..|.++..+..+- +.++..+...+..++
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 76 (256)
T 1geg_A 4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKT 76 (256)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 56888888999999999988999987776543211 112234555677766554432 233344444444444
No 216
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=59.14 E-value=32 Score=29.63 Aligned_cols=71 Identities=13% Similarity=0.072 Sum_probs=46.4
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC---CHHHHHHHHHcCCEEEEeCCCCC-hhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM---SLERRIILRAFGAELVLTDPAKG-MKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~---~~~~~~~~~~~Ga~v~~~~~~~~-~~~~~~~a~~~~~~ 141 (321)
..+||..+|--|.++|..-...|.+++++..... .....+.++..|.++..+..+-. .++..+...+..++
T Consensus 51 ~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 51 KALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREA 125 (294)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 6788888888999999998999998777644321 12223456778888888775433 33344444444443
No 217
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=59.06 E-value=83 Score=26.67 Aligned_cols=71 Identities=6% Similarity=0.041 Sum_probs=40.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHc-CCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAF-GAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~--~~~~~~~~~~-Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
..+||..+|--|.++|..-...|.+++++-..... ....+.++.. +.++..+..+- +.++..+...+..++
T Consensus 27 ~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 101 (281)
T 3v2h_A 27 TAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADR 101 (281)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 67888888889999999988889876665332211 1112223322 56666665432 223333444444444
No 218
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=59.02 E-value=39 Score=28.04 Aligned_cols=71 Identities=15% Similarity=0.192 Sum_probs=46.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
..+||..+|--|.++|......|.++++....... ....+.++..|.++..+..+- +.++..+...+..++
T Consensus 6 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 79 (246)
T 3osu_A 6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQ 79 (246)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 66888888889999999988999998877654321 223445677788887665432 333444445555444
No 219
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=58.82 E-value=34 Score=28.62 Aligned_cols=55 Identities=13% Similarity=0.123 Sum_probs=37.3
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDP 124 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~ 124 (321)
...+||..+|.-|.++|......|.+++++...... ....+.++..|.++..+..
T Consensus 15 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~ 70 (260)
T 2zat_A 15 KVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVC 70 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEc
Confidence 367888888999999999988999987776543211 1223345556777665543
No 220
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=58.80 E-value=25 Score=28.85 Aligned_cols=52 Identities=19% Similarity=0.151 Sum_probs=40.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCC-EEEEeCC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGA-ELVLTDP 124 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga-~v~~~~~ 124 (321)
++.+|+..+|.-|.+++......|.+++++..... +...+...+. +++..+-
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~---~~~~~~~~~~~~~~~~Dl 74 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEE---QGPELRERGASDIVVANL 74 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGG---GHHHHHHTTCSEEEECCT
T ss_pred CeEEEECCCChHHHHHHHHHHhCCCeEEEEECChH---HHHHHHhCCCceEEEccc
Confidence 37788999999999999999999999988876543 3445555677 7776664
No 221
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=58.58 E-value=38 Score=23.93 Aligned_cols=49 Identities=16% Similarity=0.282 Sum_probs=33.5
Q ss_pred eEEEeeCCChHHHHHHHHHHHcC-CeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQ-YRLIITMPASMSLERRIILRAFGAELVLTD 123 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G-~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~ 123 (321)
+.+|+ .+|..|.+++......| .+++++-. .+.+.+.+...|.+++..+
T Consensus 7 ~v~I~-G~G~iG~~~~~~l~~~g~~~v~~~~r---~~~~~~~~~~~~~~~~~~d 56 (118)
T 3ic5_A 7 NICVV-GAGKIGQMIAALLKTSSNYSVTVADH---DLAALAVLNRMGVATKQVD 56 (118)
T ss_dssp EEEEE-CCSHHHHHHHHHHHHCSSEEEEEEES---CHHHHHHHHTTTCEEEECC
T ss_pred eEEEE-CCCHHHHHHHHHHHhCCCceEEEEeC---CHHHHHHHHhCCCcEEEec
Confidence 33444 44999999999999999 66655543 3556666666677765554
No 222
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=58.51 E-value=41 Score=27.93 Aligned_cols=70 Identities=11% Similarity=0.145 Sum_probs=43.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHH
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILA 140 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~ 140 (321)
..+||..+|.-|.++|......|.+++++...+.+ ....+.++..|.++..+..+- +.++..+...+..+
T Consensus 9 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (261)
T 1gee_A 9 VVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIK 81 (261)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 67888888999999999988899987776552211 112344566688877665432 23333444444443
No 223
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=58.47 E-value=33 Score=28.73 Aligned_cols=55 Identities=18% Similarity=0.200 Sum_probs=38.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPA 125 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~~~~~ 125 (321)
..+|+..+|.-|.++|......|.+++++...+.. ....+.++..|.++..+..+
T Consensus 23 ~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D 79 (274)
T 1ja9_A 23 VALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQAD 79 (274)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEec
Confidence 67888888999999999998999988777653221 12234556678887766543
No 224
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=58.40 E-value=45 Score=31.50 Aligned_cols=60 Identities=27% Similarity=0.222 Sum_probs=42.6
Q ss_pred CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-----CHHHHHHHHHcCCEEEEeCCC
Q 020805 66 ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-----SLERRIILRAFGAELVLTDPA 125 (321)
Q Consensus 66 ~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~-----~~~~~~~~~~~Ga~v~~~~~~ 125 (321)
+.+++..+||..+|.-|.++|......|.+.++++..+. .....+.++..|+++..+..+
T Consensus 256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~D 320 (511)
T 2z5l_A 256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACD 320 (511)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeC
Confidence 345667889999999999999988889996444443322 133456678889998877654
No 225
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=58.33 E-value=35 Score=28.64 Aligned_cols=71 Identities=14% Similarity=0.160 Sum_probs=43.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHH
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL-ERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILA 140 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~-~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~ 140 (321)
...+||..+|.-|.++|......|.+++++....... ...+.++..|.++..+..+- +.++..+...+..+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (262)
T 1zem_A 8 KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVR 80 (262)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 3678888889999999999999999877765432111 12234455677776554432 23333444444443
No 226
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=58.32 E-value=33 Score=29.56 Aligned_cols=54 Identities=13% Similarity=0.026 Sum_probs=40.5
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDP 124 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~~~~ 124 (321)
+.+|+..+|+-|.+++......|.+++++..... ....+..+...|.+++..+-
T Consensus 13 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl 67 (318)
T 2r6j_A 13 KILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGEL 67 (318)
T ss_dssp CEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCT
T ss_pred eEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecC
Confidence 5688888999999999998889999988887653 33344445567777776653
No 227
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=58.25 E-value=98 Score=27.26 Aligned_cols=104 Identities=19% Similarity=0.186 Sum_probs=64.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 150 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 150 (321)
.+|..-..|+.|.++|..++.+|++++++-+... . +....+|.+. . +.+ ++.++- +..++.-
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~-~---~~~~~~g~~~---~---~l~-------~~l~~a-DvVil~v 212 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRK-E---EVERELNAEF---K---PLE-------DLLRES-DFVVLAV 212 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC-H---HHHHHHCCEE---C---CHH-------HHHHHC-SEEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcc-h---hhHhhcCccc---C---CHH-------HHHhhC-CEEEECC
Confidence 4677778899999999999999999877755432 2 2334567642 1 122 223343 5555433
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHH--HHHHHHHh
Q 020805 151 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTIT--GAGKFLKE 198 (321)
Q Consensus 151 ~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~~a--Gi~~~~k~ 198 (321)
..++.. ...+..++++.+ +++.+++-++.|+... .+..+++.
T Consensus 213 p~~~~t----~~~i~~~~~~~m--k~~ailIn~srg~~v~~~aL~~aL~~ 256 (334)
T 2dbq_A 213 PLTRET----YHLINEERLKLM--KKTAILINIARGKVVDTNALVKALKE 256 (334)
T ss_dssp CCCTTT----TTCBCHHHHHHS--CTTCEEEECSCGGGBCHHHHHHHHHH
T ss_pred CCChHH----HHhhCHHHHhcC--CCCcEEEECCCCcccCHHHHHHHHHh
Confidence 222211 122334667776 4678899999998775 67777775
No 228
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=58.24 E-value=47 Score=27.16 Aligned_cols=71 Identities=11% Similarity=0.162 Sum_probs=44.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH--HHHHHHHHcCCEEEEeCCCCC-hhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL--ERRIILRAFGAELVLTDPAKG-MKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~--~~~~~~~~~Ga~v~~~~~~~~-~~~~~~~a~~~~~~ 141 (321)
..+||..+|--|.++|......|.++++....+... ...+.++..|.++..+..+-. .++..+...+..++
T Consensus 3 ~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (244)
T 1edo_A 3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDA 76 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 568888889999999999889999887754433211 122345566888876654422 23334444444444
No 229
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=58.22 E-value=43 Score=30.22 Aligned_cols=66 Identities=14% Similarity=0.046 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHc--CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCCEE
Q 020805 51 RIGYSMISDAEAK--GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI-ILRAFGAEL 119 (321)
Q Consensus 51 R~a~~~l~~a~~~--g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~-~~~~~Ga~v 119 (321)
++..+.+..+.++ |.-...+++|+....||.|..+|.....+|.+++ +.. ....+++ ..+.+|++.
T Consensus 152 ~GV~~~~~~~~~~~~G~~~L~GktV~V~G~G~VG~~~A~~L~~~GakVv-v~D--~~~~~l~~~a~~~ga~~ 220 (364)
T 1leh_A 152 YGVYRGMKAAAKEAFGSDSLEGLAVSVQGLGNVAKALCKKLNTEGAKLV-VTD--VNKAAVSAAVAEEGADA 220 (364)
T ss_dssp HHHHHHHHHHHHHHHSSCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC--SCHHHHHHHHHHHCCEE
T ss_pred hHHHHHHHHHHHhhccccCCCcCEEEEECchHHHHHHHHHHHHCCCEEE-EEc--CCHHHHHHHHHHcCCEE
Confidence 3555555554432 5201123667778889999999999999999866 333 2333333 333456543
No 230
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=58.20 E-value=32 Score=29.99 Aligned_cols=102 Identities=16% Similarity=0.196 Sum_probs=64.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 150 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 150 (321)
++|..-.-|+.|.++|..++.+|++++++-+...+... . ..+. +. .++.++. +...+.-
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~--------~--~~~~---~l-------~ell~~a-DiV~l~~ 181 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV--------D--VISE---SP-------ADLFRQS-DFVLIAI 181 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTC--------S--EECS---SH-------HHHHHHC-SEEEECC
T ss_pred chheeeccCchhHHHHHHHHhhCcEEEEEecccccccc--------c--cccC---Ch-------HHHhhcc-CeEEEEe
Confidence 56777788999999999999999999988665432211 1 1121 12 2333444 5555443
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhH--HHHHHHHHhc
Q 020805 151 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI--TGAGKFLKEK 199 (321)
Q Consensus 151 ~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~~--aGi~~~~k~~ 199 (321)
..++.. ...+..+.++.+ +++.+++-+|.|+.+ ..+..++++.
T Consensus 182 P~t~~t----~~li~~~~l~~m--k~gailIN~aRG~~vd~~aL~~aL~~g 226 (290)
T 3gvx_A 182 PLTDKT----RGMVNSRLLANA--RKNLTIVNVARADVVSKPDMIGFLKER 226 (290)
T ss_dssp CCCTTT----TTCBSHHHHTTC--CTTCEEEECSCGGGBCHHHHHHHHHHC
T ss_pred eccccc----hhhhhHHHHhhh--hcCceEEEeehhcccCCcchhhhhhhc
Confidence 323322 123445777777 578899999999864 5666777653
No 231
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=58.15 E-value=33 Score=28.44 Aligned_cols=71 Identities=10% Similarity=0.159 Sum_probs=43.9
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHH
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILA 140 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~ 140 (321)
...+||..+|--|.++|..-...|.+++++...+.. ....+.++..|.++..+..+- +.++..+...+..+
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (246)
T 2uvd_A 5 KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVD 78 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 367888888999999999988999988777652221 112344556677776554432 23333444444443
No 232
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=58.07 E-value=61 Score=28.73 Aligned_cols=61 Identities=16% Similarity=0.142 Sum_probs=41.7
Q ss_pred HcCCCCCCCeEEEee-CCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHH----HHcCCEEEEeCC
Q 020805 62 AKGLITPGESVLIEP-TSGNTGIGLAFMAAAKQYRLIITMPASM--SLERRIIL----RAFGAELVLTDP 124 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~-SsGN~g~AlA~aa~~~G~~~~ivvp~~~--~~~~~~~~----~~~Ga~v~~~~~ 124 (321)
+.|.+. | .+|+-. =.+|.+.+++.+++++|++++++.|+.- ++.-++.+ +..|+++..+..
T Consensus 151 ~~g~l~-g-lkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d 218 (323)
T 3gd5_A 151 NFGRLA-G-LKLAYVGDGNNVAHSLLLGCAKVGMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQILRD 218 (323)
T ss_dssp HHSCCT-T-CEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESC
T ss_pred HhCCCC-C-CEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEECC
Confidence 345543 2 334433 3389999999999999999999999863 33333333 457998888773
No 233
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=57.75 E-value=47 Score=29.67 Aligned_cols=106 Identities=21% Similarity=0.200 Sum_probs=66.4
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQ 149 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 149 (321)
+.+|..-..|+.|.++|..++.+|++++++=|...+. ..+.+|++. +. +. .++.++. +...++
T Consensus 168 g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~----~~~~~g~~~--~~---~l-------~ell~~a-DvV~l~ 230 (347)
T 1mx3_A 168 GETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDG----VERALGLQR--VS---TL-------QDLLFHS-DCVTLH 230 (347)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTT----HHHHHTCEE--CS---SH-------HHHHHHC-SEEEEC
T ss_pred CCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchh----hHhhcCCee--cC---CH-------HHHHhcC-CEEEEc
Confidence 3567777889999999999999999987775543321 124467642 22 12 2333444 555553
Q ss_pred CCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhH--HHHHHHHHh
Q 020805 150 QFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI--TGAGKFLKE 198 (321)
Q Consensus 150 ~~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~~--aGi~~~~k~ 198 (321)
-..++.. ...+..+.++++ +++.+++-+++|+.+ ..+..++++
T Consensus 231 ~P~t~~t----~~li~~~~l~~m--k~gailIN~arg~~vd~~aL~~aL~~ 275 (347)
T 1mx3_A 231 CGLNEHN----HHLINDFTVKQM--RQGAFLVNTARGGLVDEKALAQALKE 275 (347)
T ss_dssp CCCCTTC----TTSBSHHHHTTS--CTTEEEEECSCTTSBCHHHHHHHHHH
T ss_pred CCCCHHH----HHHhHHHHHhcC--CCCCEEEECCCChHHhHHHHHHHHHh
Confidence 3222222 122335677776 578999999999865 566677765
No 234
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=57.61 E-value=31 Score=29.71 Aligned_cols=73 Identities=12% Similarity=-0.008 Sum_probs=44.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHhC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAKT 142 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~~ 142 (321)
...+||..+|.-|.++|......|.+++++...... ....+.++..|.++..+..+- +.++..+...+..++.
T Consensus 35 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 109 (291)
T 3cxt_A 35 KIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDVTDEDGIQAMVAQIESEV 109 (291)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 367888899999999999988899987776543211 112334555676665544332 2333444444544443
No 235
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=57.58 E-value=30 Score=30.73 Aligned_cols=57 Identities=18% Similarity=0.047 Sum_probs=37.3
Q ss_pred HHcCCCC-CCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-HcCCEEEE
Q 020805 61 EAKGLIT-PGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILR-AFGAELVL 121 (321)
Q Consensus 61 ~~~g~~~-~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~-~~Ga~v~~ 121 (321)
.++..+. +|.+.+|. .+|.-|..++..|+.+|.+++++.+. +.+++.++ .+|++.++
T Consensus 172 l~~~~~~~~g~~VlV~-GaG~vG~~a~qlak~~Ga~Vi~~~~~---~~~~~~~~~~lGa~~vi 230 (357)
T 2cf5_A 172 LSHFGLKQPGLRGGIL-GLGGVGHMGVKIAKAMGHHVTVISSS---NKKREEALQDLGADDYV 230 (357)
T ss_dssp HHHTSTTSTTCEEEEE-CCSHHHHHHHHHHHHHTCEEEEEESS---TTHHHHHHTTSCCSCEE
T ss_pred HHhcCCCCCCCEEEEE-CCCHHHHHHHHHHHHCCCeEEEEeCC---hHHHHHHHHHcCCceee
Confidence 3333455 77665555 46889999999999999876555443 24555555 78876443
No 236
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=57.48 E-value=20 Score=30.62 Aligned_cols=54 Identities=13% Similarity=0.154 Sum_probs=39.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-C--CH-HHHH---HHHHcCCEEEEeCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS-M--SL-ERRI---ILRAFGAELVLTDP 124 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~-~--~~-~~~~---~~~~~Ga~v~~~~~ 124 (321)
+.+|+..+|.-|.+++......|.+++++.... . .+ .+.+ .+...|.+++..+-
T Consensus 4 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~ 64 (307)
T 2gas_A 4 KILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDI 64 (307)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCT
T ss_pred EEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCC
Confidence 568888899999999999888899988887654 1 12 3333 34456888877664
No 237
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=57.35 E-value=32 Score=29.43 Aligned_cols=71 Identities=13% Similarity=0.043 Sum_probs=45.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
..+||..+|--|.++|..-...|.+++++-..... ....+.++..|.++..+..+- +.++..+...+..++
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (283)
T 3v8b_A 30 VALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLK 102 (283)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 67888888999999999988999988776543221 122334555677777665442 333444445555444
No 238
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=57.00 E-value=21 Score=30.54 Aligned_cols=72 Identities=17% Similarity=0.085 Sum_probs=43.4
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
...+||..+|.-|.++|......|.+++++...... ....+.++..|.++..+..+- +.++..+...+..++
T Consensus 45 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 118 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE 118 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHh
Confidence 367888888999999999888889887774322111 112334555687776665432 233334444444444
No 239
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=56.82 E-value=46 Score=27.79 Aligned_cols=71 Identities=13% Similarity=0.198 Sum_probs=41.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-H-HHHHHHHHc-CCEEEEeCCCCC-hhHHHHHHHHHHH
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-L-ERRIILRAF-GAELVLTDPAKG-MKGAVQKAEEILA 140 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-~-~~~~~~~~~-Ga~v~~~~~~~~-~~~~~~~a~~~~~ 140 (321)
...+||..+|--|.++|......|.+++++...... . ...+.++.. |.++..+..+-. .++..+...+..+
T Consensus 5 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 79 (260)
T 1x1t_A 5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVR 79 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 367888888889999999988999987766443211 1 112233332 777776664432 2333334444433
No 240
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=56.75 E-value=45 Score=29.56 Aligned_cols=105 Identities=15% Similarity=0.110 Sum_probs=67.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 150 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 150 (321)
++|..-.-|+.|.++|..++.+|++++++-+...+.. ....+|++. + +. .++.++. +...++-
T Consensus 146 ~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~---~~~~~g~~~--~----~l-------~ell~~a-DvV~l~~ 208 (330)
T 4e5n_A 146 ATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQ---TEQRLGLRQ--V----AC-------SELFASS-DFILLAL 208 (330)
T ss_dssp CEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHH---HHHHHTEEE--C----CH-------HHHHHHC-SEEEECC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHh---HHHhcCcee--C----CH-------HHHHhhC-CEEEEcC
Confidence 5677778899999999999999999887755442332 334456532 1 12 2334444 5565543
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhH--HHHHHHHHh
Q 020805 151 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI--TGAGKFLKE 198 (321)
Q Consensus 151 ~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~~--aGi~~~~k~ 198 (321)
-.++.. ...+..+.++.+ +++.+++-+|.|+.+ ..+..+++.
T Consensus 209 P~t~~t----~~li~~~~l~~m--k~gailIN~arg~~vd~~aL~~aL~~ 252 (330)
T 4e5n_A 209 PLNADT----LHLVNAELLALV--RPGALLVNPCRGSVVDEAAVLAALER 252 (330)
T ss_dssp CCSTTT----TTCBCHHHHTTS--CTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred CCCHHH----HHHhCHHHHhhC--CCCcEEEECCCCchhCHHHHHHHHHh
Confidence 323322 233456778887 579999999999975 556667765
No 241
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=56.37 E-value=55 Score=27.53 Aligned_cols=55 Identities=15% Similarity=0.105 Sum_probs=39.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHH-HHHHHHcCCEEEEeCCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLER-RIILRAFGAELVLTDPA 125 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~-~~~~~~~Ga~v~~~~~~ 125 (321)
..+|+..+|.-|.++|......|.+++++........+ .+.++.+|.++..+..+
T Consensus 36 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D 91 (279)
T 3ctm_A 36 VASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCN 91 (279)
T ss_dssp EEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEee
Confidence 67888888999999999988889998877665443332 34455567777666543
No 242
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=56.25 E-value=82 Score=28.25 Aligned_cols=106 Identities=12% Similarity=0.122 Sum_probs=67.4
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCe-EEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYR-LIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQ 149 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~-~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 149 (321)
.+|..-.-|+.|.++|..++.+|++ ++++-+...+.. ....+|++. +. +. .++.++. +...++
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~---~~~~~g~~~--~~---~l-------~ell~~a-DvV~l~ 228 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKD---AEEKVGARR--VE---NI-------EELVAQA-DIVTVN 228 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHH---HHHHTTEEE--CS---SH-------HHHHHTC-SEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchh---HHHhcCcEe--cC---CH-------HHHHhcC-CEEEEC
Confidence 5677778899999999999999997 777754443333 345577552 22 12 2333443 555554
Q ss_pred CCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhH--HHHHHHHHh
Q 020805 150 QFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI--TGAGKFLKE 198 (321)
Q Consensus 150 ~~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~~--aGi~~~~k~ 198 (321)
--.++.. ...+..+.++++ +++.+++-+|.|+.+ ..+..++++
T Consensus 229 ~P~t~~t----~~li~~~~l~~m--k~ga~lIn~arG~~vd~~aL~~aL~~ 273 (364)
T 2j6i_A 229 APLHAGT----KGLINKELLSKF--KKGAWLVNTARGAICVAEDVAAALES 273 (364)
T ss_dssp CCCSTTT----TTCBCHHHHTTS--CTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred CCCChHH----HHHhCHHHHhhC--CCCCEEEECCCCchhCHHHHHHHHHc
Confidence 3323222 123445677777 478999999999865 556677765
No 243
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=56.10 E-value=30 Score=29.41 Aligned_cols=73 Identities=12% Similarity=0.073 Sum_probs=45.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHhC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAKT 142 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~~ 142 (321)
...+||..+|--|.++|..-...|.+++++-.... .....+.++..|.++..+..+- +.++..+...+..++.
T Consensus 27 k~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (271)
T 4ibo_A 27 RTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQG 101 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 36788888888899999988889987665533211 1122445666788888776543 2334445555555543
No 244
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=56.09 E-value=58 Score=27.49 Aligned_cols=69 Identities=9% Similarity=-0.014 Sum_probs=47.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHhC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAKT 142 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~~ 142 (321)
..|||.+++--|+++|..-...|.++++.- ..+.+.+.+...+.++..+..+- +.++..+...+..++.
T Consensus 4 ~vlVTGas~GIG~aia~~la~~Ga~V~~~~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~ 73 (247)
T 3ged_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFID---IDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKL 73 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEE---SCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEe---CCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 568888888899999999999999987763 24566667777777776665432 3344455555555543
No 245
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=56.04 E-value=41 Score=28.38 Aligned_cols=71 Identities=15% Similarity=0.136 Sum_probs=42.2
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHH-HHcCCEEEEeCCCC-ChhHHHHHHHHHHH
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL-ERRIIL-RAFGAELVLTDPAK-GMKGAVQKAEEILA 140 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~-~~~~~~-~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~ 140 (321)
...+||..+|.-|.++|......|.+++++....... ...+.+ +..|.++..+..+- +.++..+...+..+
T Consensus 22 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 95 (267)
T 1vl8_A 22 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKE 95 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 3678888889999999999889999877765432111 112223 44577776554332 23333344444433
No 246
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=55.95 E-value=34 Score=29.49 Aligned_cols=71 Identities=10% Similarity=0.120 Sum_probs=46.4
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC---------CHH----HHHHHHHcCCEEEEeCCCC-ChhHHHHHHH
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM---------SLE----RRIILRAFGAELVLTDPAK-GMKGAVQKAE 136 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~---------~~~----~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~ 136 (321)
..|||..+|--|.++|..-...|.+++++-.... ... ..+.++..|.++..+..+- +.++..+...
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 109 (299)
T 3t7c_A 30 VAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAVD 109 (299)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHH
Confidence 6788888888999999999999999887754311 122 2345677888887766443 3334444455
Q ss_pred HHHHh
Q 020805 137 EILAK 141 (321)
Q Consensus 137 ~~~~~ 141 (321)
+..++
T Consensus 110 ~~~~~ 114 (299)
T 3t7c_A 110 DGVTQ 114 (299)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54444
No 247
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=55.52 E-value=49 Score=28.01 Aligned_cols=72 Identities=15% Similarity=0.111 Sum_probs=45.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCC---EEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGA---ELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga---~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
...+||..+|--|.++|..-...|.+++++-..... ....+.++..|. ++..+..+- +.++..+...+..++
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 12 RTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW 88 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 367888888999999999988999987776443211 223445666666 776665432 233444444544443
No 248
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=55.20 E-value=69 Score=29.18 Aligned_cols=106 Identities=12% Similarity=0.074 Sum_probs=68.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 150 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 150 (321)
++|..-.-|+.|.++|..++.+|++++++-+...+. +..+.+|++. +. +. .++.++- +...++-
T Consensus 192 ktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~---~~~~~~G~~~--~~---~l-------~ell~~a-DvV~l~~ 255 (393)
T 2nac_A 192 MHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPE---SVEKELNLTW--HA---TR-------EDMYPVC-DVVTLNC 255 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCH---HHHHHHTCEE--CS---SH-------HHHGGGC-SEEEECS
T ss_pred CEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccch---hhHhhcCcee--cC---CH-------HHHHhcC-CEEEEec
Confidence 567777889999999999999999987775544333 2345567664 11 11 2344444 5665543
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHH--HHHHHHHh
Q 020805 151 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTIT--GAGKFLKE 198 (321)
Q Consensus 151 ~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~~a--Gi~~~~k~ 198 (321)
-.++.. ...+..+.++.+ +++.+++-++.|+.+- .+..+++.
T Consensus 256 Plt~~t----~~li~~~~l~~m--k~gailIN~aRG~~vde~aL~~aL~~ 299 (393)
T 2nac_A 256 PLHPET----EHMINDETLKLF--KRGAYIVNTARGKLCDRDAVARALES 299 (393)
T ss_dssp CCCTTT----TTCBSHHHHTTS--CTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred CCchHH----HHHhhHHHHhhC--CCCCEEEECCCchHhhHHHHHHHHHc
Confidence 333322 123445667777 5789999999998764 57777765
No 249
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=55.06 E-value=33 Score=29.04 Aligned_cols=72 Identities=14% Similarity=0.122 Sum_probs=46.2
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC---------CCHHH----HHHHHHcCCEEEEeCCCC-ChhHHHHHH
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS---------MSLER----RIILRAFGAELVLTDPAK-GMKGAVQKA 135 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~---------~~~~~----~~~~~~~Ga~v~~~~~~~-~~~~~~~~a 135 (321)
...+||..+|--|.++|..-...|.+++++-... ....+ .+.++..|.++..+..+- +.++..+..
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 93 (278)
T 3sx2_A 14 KVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAAL 93 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 3678888889999999999999999987765431 11222 334566788887766543 233444444
Q ss_pred HHHHHh
Q 020805 136 EEILAK 141 (321)
Q Consensus 136 ~~~~~~ 141 (321)
.+..++
T Consensus 94 ~~~~~~ 99 (278)
T 3sx2_A 94 QAGLDE 99 (278)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555444
No 250
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=54.62 E-value=65 Score=26.67 Aligned_cols=70 Identities=14% Similarity=0.078 Sum_probs=44.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCC-hhHHHHHHHHHHHh
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKG-MKGAVQKAEEILAK 141 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~-~~~~~~~a~~~~~~ 141 (321)
...+||..+|--|.++|......|.+++++-.. .....+..+.+|.++..+..+-. .++..+...+..++
T Consensus 7 k~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 77 (247)
T 3rwb_A 7 KTALVTGAAQGIGKAIAARLAADGATVIVSDIN--AEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQAL 77 (247)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSC--HHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 367888888889999999999999987665332 22223334555888877765432 33344444444443
No 251
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=54.61 E-value=79 Score=26.14 Aligned_cols=69 Identities=10% Similarity=0.020 Sum_probs=43.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHH
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILA 140 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~ 140 (321)
...+||..+|.-|.++|..-...|.+++++......... ..+.+|.++..+..+- +.++..+...+..+
T Consensus 13 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (265)
T 2o23_A 13 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEA--QAKKLGNNCVFAPADVTSEKDVQTALALAKG 82 (265)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHH--HHHHHCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHH--HHHHhCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 367888899999999999988999998877655433322 2333466666554432 22333344444433
No 252
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=54.51 E-value=34 Score=29.06 Aligned_cols=72 Identities=13% Similarity=0.040 Sum_probs=45.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC----------CCHHH----HHHHHHcCCEEEEeCCCC-ChhHHHHH
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS----------MSLER----RIILRAFGAELVLTDPAK-GMKGAVQK 134 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~----------~~~~~----~~~~~~~Ga~v~~~~~~~-~~~~~~~~ 134 (321)
...+||..+|--|.++|..-...|.+++++-... ....+ .+.++..|.++..+..+- +.++..+.
T Consensus 16 k~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 95 (280)
T 3pgx_A 16 RVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALREL 95 (280)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence 3678888888899999999999999988775421 12333 334566788877665432 33344444
Q ss_pred HHHHHHh
Q 020805 135 AEEILAK 141 (321)
Q Consensus 135 a~~~~~~ 141 (321)
..+..++
T Consensus 96 ~~~~~~~ 102 (280)
T 3pgx_A 96 VADGMEQ 102 (280)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4554444
No 253
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=54.42 E-value=97 Score=26.03 Aligned_cols=43 Identities=14% Similarity=0.078 Sum_probs=30.6
Q ss_pred HHHHhhhCCCCCEEEEecCCchhHHHHHHHHHhcC----CCcEEEEEecC
Q 020805 166 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIEPT 211 (321)
Q Consensus 166 ~Ei~~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~----~~~~vigv~~~ 211 (321)
.+++++ .+.||+||+ .+..++.|+..++++.+ .++.|+|.+-.
T Consensus 179 ~~~l~~-~~~~~ai~~--~nd~~A~g~~~al~~~G~~vP~di~vig~D~~ 225 (294)
T 3qk7_A 179 SRLLAL-EVPPTAIIT--DCNMLGDGVASALDKAGLLGGEGISLIAYDGL 225 (294)
T ss_dssp HHHHHS-SSCCSEEEE--SSHHHHHHHHHHHHHTTCSSTTSCEEEEETCS
T ss_pred HHHHcC-CCCCcEEEE--CCHHHHHHHHHHHHHcCCCCCCceEEEeecCc
Confidence 344443 357999987 46677889999999876 25788888733
No 254
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=54.33 E-value=47 Score=28.06 Aligned_cols=68 Identities=16% Similarity=0.135 Sum_probs=43.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHH-HHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLER-RIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~-~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
..+||..+|--|.++|..-...|.+++++-.. ..+ .+..+.+|.++..+..+- +.++..+...+..++
T Consensus 29 ~vlVTGas~gIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (266)
T 3grp_A 29 KALVTGATGGIGEAIARCFHAQGAIVGLHGTR---EDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAERE 98 (266)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHH
Confidence 67888888888999999988999887766432 233 233456677777665432 233444444444443
No 255
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=54.25 E-value=43 Score=29.86 Aligned_cols=52 Identities=19% Similarity=0.194 Sum_probs=34.8
Q ss_pred CCC-CCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-HcCCEEE
Q 020805 65 LIT-PGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILR-AFGAELV 120 (321)
Q Consensus 65 ~~~-~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~-~~Ga~v~ 120 (321)
.+. +|...+|.. +|.-|.+++..|+.+|.+++++.+. +.+++.++ .+|++.+
T Consensus 183 ~~~~~g~~VlV~G-aG~vG~~~~q~a~~~Ga~Vi~~~~~---~~~~~~~~~~lGa~~v 236 (366)
T 1yqd_A 183 GLDEPGKHIGIVG-LGGLGHVAVKFAKAFGSKVTVISTS---PSKKEEALKNFGADSF 236 (366)
T ss_dssp TCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESC---GGGHHHHHHTSCCSEE
T ss_pred CcCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHhcCCceE
Confidence 345 675655654 6899999999999999876555433 24445544 7887644
No 256
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=54.09 E-value=41 Score=28.05 Aligned_cols=55 Identities=11% Similarity=-0.054 Sum_probs=36.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDP 124 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~ 124 (321)
...+||..+|--|.++|......|.+++++...... ....+.++..|.++..+..
T Consensus 15 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 70 (266)
T 1xq1_A 15 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVC 70 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEEC
Confidence 367888888999999999988899987776543211 1123345556777665543
No 257
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=54.05 E-value=61 Score=29.87 Aligned_cols=52 Identities=13% Similarity=0.176 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC
Q 020805 51 RIGYSMISDAEA-KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS 103 (321)
Q Consensus 51 R~a~~~l~~a~~-~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~ 103 (321)
||+.+.+..+.+ .|. ...+.+|+....||-|..+|.....+|.+++.+...+
T Consensus 199 ~Gv~~~~~~~~~~~g~-~l~gk~vaVqG~GnVG~~~a~~L~~~GakVVavsD~~ 251 (419)
T 3aoe_E 199 LGALLVLEALAKRRGL-DLRGARVVVQGLGQVGAAVALHAERLGMRVVAVATSM 251 (419)
T ss_dssp HHHHHHHHHHHHHHTC-CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred HHHHHHHHHHHHhcCC-CccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 577777776654 453 3234678888899999999988888888877665443
No 258
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=53.75 E-value=99 Score=25.93 Aligned_cols=70 Identities=11% Similarity=0.095 Sum_probs=42.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHHh
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAK 141 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 141 (321)
...+||..+|--|.++|..-...|.+++++-......... .+.+|.++..+..+ .+.++..+...+..++
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (271)
T 3tzq_B 12 KVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGA--AASVGRGAVHHVVDLTNEVSVRALIDFTIDT 82 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHH--HHHHCTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH--HHHhCCCeEEEECCCCCHHHHHHHHHHHHHH
Confidence 3678888889999999999999999987776554433322 23335544444332 2334444444544444
No 259
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=53.66 E-value=55 Score=27.58 Aligned_cols=72 Identities=11% Similarity=-0.020 Sum_probs=44.2
Q ss_pred CeEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH-cC-CEEEEeCCCCChhHHHHHHHHHHHhC
Q 020805 70 ESVLIEPTS--GNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRA-FG-AELVLTDPAKGMKGAVQKAEEILAKT 142 (321)
Q Consensus 70 ~~~vv~~Ss--GN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~-~G-a~v~~~~~~~~~~~~~~~a~~~~~~~ 142 (321)
...+||..+ |--|.++|......|.+++++..........+.+.. .| ..++.++-. +.++..+...+..++.
T Consensus 7 k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~~~ 82 (275)
T 2pd4_A 7 KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVS-KEEHFKSLYNSVKKDL 82 (275)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTT-CHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCC-CHHHHHHHHHHHHHHc
Confidence 366888876 889999999988899998777655433445555544 34 333444432 3344445555555544
No 260
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=53.53 E-value=22 Score=32.54 Aligned_cols=47 Identities=15% Similarity=0.118 Sum_probs=34.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 120 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~ 120 (321)
.+|+....|+.|.++|..++.+|.+++++ . ....+.+.++.+|++.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~-D--~~~~~~~~~~~lGa~~~ 219 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAF-D--TRPEVKEQVQSMGAEFL 219 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEE-C--SCGGGHHHHHHTTCEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEE-c--CCHHHHHHHHHcCCEEE
Confidence 45677778999999999999999875554 2 23345566678899865
No 261
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=53.52 E-value=89 Score=26.96 Aligned_cols=160 Identities=10% Similarity=0.084 Sum_probs=80.6
Q ss_pred ceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC---------
Q 020805 33 ARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS--------- 103 (321)
Q Consensus 33 ~~v~~K~E~~~ptGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~--------- 103 (321)
.++.+.+...+|. .+...+.++.++++ ..|+...+.....+++-.+...++|.+......
T Consensus 44 ~~l~~~d~~~~~~------~~~~~~~~l~~~~v-----~~iig~~~s~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~ 112 (356)
T 3ipc_A 44 IKIVLGDDVSDPK------QGISVANKFVADGV-----KFVVGHANSGVSIPASEVYAENGILEITPAATNPVFTERGLW 112 (356)
T ss_dssp EEEEEEECTTCHH------HHHHHHHHHHHTTC-----CEEEECSSHHHHHHHHHHHHTTTCEEEESSCCCGGGGSSCCT
T ss_pred EEEEEecCCCCHH------HHHHHHHHHHHCCC-----cEEEcCCCcHHHHHHHHHHHhCCCeEEecCCCCcHhhcCCCC
Confidence 3455555444332 23334444555665 557766666666777788899999977632110
Q ss_pred ------CCH-----HHHH-HHHHcCC-EEEEeCCCCCh-hHHHHHHHHHHHhCCCeE-EcCCCCCCcchhhhhhchHHHH
Q 020805 104 ------MSL-----ERRI-ILRAFGA-ELVLTDPAKGM-KGAVQKAEEILAKTPNAY-MLQQFENPANPKIHYETTGPEL 168 (321)
Q Consensus 104 ------~~~-----~~~~-~~~~~Ga-~v~~~~~~~~~-~~~~~~a~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~Ei 168 (321)
.+. .-.+ .++.+|. +|.++..+..+ .+..+..++..++.+... ....+. +.. ..+.....+|
T Consensus 113 ~~~~~~~~~~~~~~~~~~~l~~~~g~~~iaii~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~-~~~--~d~~~~~~~l 189 (356)
T 3ipc_A 113 NTFRTCGRDDQQGGIAGKYLADHFKDAKVAIIHDKTPYGQGLADETKKAANAAGVTEVMYEGVN-VGD--KDFSALISKM 189 (356)
T ss_dssp TEEESSCCHHHHHHHHHHHHHHHCTTCCEEEEECSSHHHHHHHHHHHHHHHHTTCCCSEEEECC-TTC--CCCHHHHHHH
T ss_pred cEEEecCChHHHHHHHHHHHHHhcCCCEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEEeeC-CCC--CCHHHHHHHH
Confidence 111 1122 2344575 45555443222 122333344444442211 000110 000 0112222222
Q ss_pred HhhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEec
Q 020805 169 WKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEP 210 (321)
Q Consensus 169 ~~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~~ 210 (321)
.+ .+||.||++ +++..+.++.+.+++.+-.+++++...
T Consensus 190 ~~---~~~d~v~~~-~~~~~a~~~~~~~~~~g~~~~~~~~~~ 227 (356)
T 3ipc_A 190 KE---AGVSIIYWG-GLHTEAGLIIRQAADQGLKAKLVSGDG 227 (356)
T ss_dssp HH---TTCCEEEEE-SCHHHHHHHHHHHHHHTCCCEEEECGG
T ss_pred Hh---cCCCEEEEc-cCchHHHHHHHHHHHCCCCCcEEEecc
Confidence 22 368988764 566777889999999888888877553
No 262
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=53.35 E-value=1.2e+02 Score=27.24 Aligned_cols=113 Identities=16% Similarity=0.130 Sum_probs=73.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 150 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 150 (321)
++|-.-.-|+-|.++|..++.+|++++++=|.. +. ......|++. . +. .++.++. +...++-
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~-~~---~~~~~~g~~~--~----~l-------~ell~~a-DvV~l~~ 238 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGFRARIRVFDPWL-PR---SMLEENGVEP--A----SL-------EDVLTKS-DFIFVVA 238 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTSCCEEEEECSSS-CH---HHHHHTTCEE--C----CH-------HHHHHSC-SEEEECS
T ss_pred CEEEEecCCcccHHHHHhhhhCCCEEEEECCCC-CH---HHHhhcCeee--C----CH-------HHHHhcC-CEEEEcC
Confidence 567777889999999999999999988776542 32 2345577752 1 12 2344444 5665543
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhH--HHHHHHHHhcCCCcEEEEEec
Q 020805 151 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI--TGAGKFLKEKNPNIKLYGIEP 210 (321)
Q Consensus 151 ~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~~--aGi~~~~k~~~~~~~vigv~~ 210 (321)
-.++.. ...+..+.++++ +++.+++-++.|+.+ ..+..+++. ..+. .+.++
T Consensus 239 Plt~~T----~~li~~~~l~~m--k~gailIN~aRG~~vde~aL~~aL~~--g~i~-aaLDV 291 (365)
T 4hy3_A 239 AVTSEN----KRFLGAEAFSSM--RRGAAFILLSRADVVDFDALMAAVSS--GHIV-AASDV 291 (365)
T ss_dssp CSSCC-------CCCHHHHHTS--CTTCEEEECSCGGGSCHHHHHHHHHT--TSSE-EEESC
T ss_pred cCCHHH----HhhcCHHHHhcC--CCCcEEEECcCCchhCHHHHHHHHHc--CCce-EEeeC
Confidence 333332 233456778887 578999999999987 566677765 3455 45553
No 263
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=53.32 E-value=52 Score=27.47 Aligned_cols=71 Identities=15% Similarity=0.152 Sum_probs=41.4
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHHHHc-CCEEEEeCCCC-ChhHHHHHHHHHHH
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL-ERRIILRAF-GAELVLTDPAK-GMKGAVQKAEEILA 140 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~-~~~~~~~~~-Ga~v~~~~~~~-~~~~~~~~a~~~~~ 140 (321)
...+||..+|.-|.++|......|.+++++....... ...+.++.. |.++..+..+- +.++..+...+..+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (263)
T 3ai3_A 8 KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRS 81 (263)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 3678888899999999999888999877765432111 111223333 76666554432 22333344444433
No 264
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=53.22 E-value=94 Score=26.33 Aligned_cols=31 Identities=26% Similarity=0.347 Sum_probs=23.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 101 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp 101 (321)
..+||..+|--|.++|......|.+++++-.
T Consensus 35 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r 65 (281)
T 4dry_A 35 IALVTGGGTGVGRGIAQALSAEGYSVVITGR 65 (281)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 6678888888888888888788887666543
No 265
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=53.13 E-value=39 Score=28.07 Aligned_cols=54 Identities=11% Similarity=0.050 Sum_probs=34.4
Q ss_pred CeEEEeeCCChHHHHHHHHHHH-cCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAA-KQYRLIITMPASMS-LERRIILRAFGAELVLTD 123 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~-~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~ 123 (321)
...+||..+|--|.++|..-.. .|.+++++...... ....+.++..|.++..+.
T Consensus 5 k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 60 (276)
T 1wma_A 5 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQ 60 (276)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEE
Confidence 3678888888899999988777 89887776543211 122334455565554443
No 266
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A
Probab=53.08 E-value=60 Score=30.07 Aligned_cols=72 Identities=7% Similarity=0.064 Sum_probs=47.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKT 142 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~ 142 (321)
+..+||..+|--|.++|..-...|.+++++-.........+..+..+.+++.++-. +.++..+...+..++.
T Consensus 214 k~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvt-d~~~v~~~~~~~~~~~ 285 (454)
T 3u0b_A 214 KVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVT-ADDAVDKITAHVTEHH 285 (454)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTT-STTHHHHHHHHHHHHS
T ss_pred CEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecC-CHHHHHHHHHHHHHHc
Confidence 46778888888888888887788998666544333333344556778888877753 3345555555555543
No 267
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=53.08 E-value=64 Score=27.14 Aligned_cols=54 Identities=15% Similarity=0.110 Sum_probs=36.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcC--CEEEEeCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFG--AELVLTDP 124 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-~~~~~~~~~~G--a~v~~~~~ 124 (321)
..+|+..+|.-|.++|......|.+++++...... ....+.++..| .++..+..
T Consensus 34 ~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (279)
T 1xg5_A 34 LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRC 90 (279)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEEC
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEe
Confidence 67888899999999999988999987777543211 11223445555 56655543
No 268
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=52.87 E-value=31 Score=30.20 Aligned_cols=54 Identities=22% Similarity=0.102 Sum_probs=41.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-CCHHHHH---HHHHcCCEEEEeCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS-MSLERRI---ILRAFGAELVLTDP 124 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~-~~~~~~~---~~~~~Ga~v~~~~~ 124 (321)
+.+|+..+|.-|.+++......|.+++++.... ..+.+.. .+...|.+++..+-
T Consensus 12 ~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl 69 (346)
T 3i6i_A 12 RVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLI 69 (346)
T ss_dssp CEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeec
Confidence 568888999999999999989999999888764 3444444 44556777776664
No 269
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=52.84 E-value=20 Score=32.57 Aligned_cols=47 Identities=11% Similarity=0.138 Sum_probs=34.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 120 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~ 120 (321)
.+|+.-..|+.|++++..++.+|.+++++ ..+ +.+.+.++.+|++++
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~-d~~--~~~~~~~~~~Ga~~~ 219 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMAT-DVR--AATKEQVESLGGKFI 219 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEE-CSC--STTHHHHHHTTCEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEE-eCC--HHHHHHHHHcCCeEE
Confidence 45677778999999999999999974444 322 234556667999865
No 270
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=52.45 E-value=30 Score=29.63 Aligned_cols=72 Identities=14% Similarity=0.088 Sum_probs=43.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCCCC-hhHHHHHHHHHHHh
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPAKG-MKGAVQKAEEILAK 141 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~~~-~~~~~~~a~~~~~~ 141 (321)
...+||..+|--|.++|..-...|.+++++-..... ....+.++..|.++..+..+-. .++..+...+..++
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (280)
T 3tox_A 9 KIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRR 82 (280)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 367888888888999999988899986654332111 1223344556888887765432 33344444444443
No 271
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=52.39 E-value=19 Score=30.18 Aligned_cols=52 Identities=8% Similarity=-0.007 Sum_probs=36.4
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 122 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~ 122 (321)
..+||..+|--|.++|......|.+++++............++..|.++..+
T Consensus 3 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~ 54 (254)
T 1zmt_A 3 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM 54 (254)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE
Confidence 4578888888999999998889998776654433333333355667777666
No 272
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=52.34 E-value=55 Score=27.74 Aligned_cols=54 Identities=17% Similarity=0.169 Sum_probs=35.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHHHHcCC-EEEEeCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL-ERRIILRAFGA-ELVLTDP 124 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~-~~~~~~~~~Ga-~v~~~~~ 124 (321)
..+||..+|--|.++|......|.+++++....... ...+.++..|. ++..+..
T Consensus 30 ~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (286)
T 1xu9_A 30 KVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 85 (286)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeC
Confidence 678888889999999999888999877765432111 11223444554 6655544
No 273
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=52.19 E-value=38 Score=28.76 Aligned_cols=72 Identities=8% Similarity=0.075 Sum_probs=46.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC-------------CCCHHHH----HHHHHcCCEEEEeCCCC-ChhHH
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA-------------SMSLERR----IILRAFGAELVLTDPAK-GMKGA 131 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~-------------~~~~~~~----~~~~~~Ga~v~~~~~~~-~~~~~ 131 (321)
...+||..+|--|.++|..-...|.+++++-.. .....++ +.++..|.++..+..+- +.++.
T Consensus 12 k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 91 (286)
T 3uve_A 12 KVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDAL 91 (286)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHHH
Confidence 367888888999999999999999998776432 1113333 34556787777665432 33444
Q ss_pred HHHHHHHHHh
Q 020805 132 VQKAEEILAK 141 (321)
Q Consensus 132 ~~~a~~~~~~ 141 (321)
.+...+..++
T Consensus 92 ~~~~~~~~~~ 101 (286)
T 3uve_A 92 KAAVDSGVEQ 101 (286)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4445555444
No 274
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=52.07 E-value=48 Score=28.55 Aligned_cols=71 Identities=14% Similarity=0.148 Sum_probs=44.4
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcC-CEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFG-AELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-~~~~~~~~~~G-a~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
..+||..+|--|.++|..-...|.+++++-..... ....+.++..| .++..+..+- +.++..+...+..++
T Consensus 43 ~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 116 (293)
T 3rih_A 43 SVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDA 116 (293)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 67888888888999999988999988877654322 33344555566 4665554332 334444444555444
No 275
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=51.97 E-value=45 Score=29.42 Aligned_cols=56 Identities=16% Similarity=0.197 Sum_probs=37.7
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcC-CeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 020805 62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQ-YRLIITMPASMSLERRIILRAFGAELVLT 122 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G-~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~ 122 (321)
+.+.+++|...+|...+|..|.+++..|+.+| .+++... +..|.+.++ +|++.++-
T Consensus 136 ~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~----~~~~~~~~~-~ga~~~~~ 192 (349)
T 4a27_A 136 EVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA----STFKHEAIK-DSVTHLFD 192 (349)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE----CGGGHHHHG-GGSSEEEE
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC----CHHHHHHHH-cCCcEEEc
Confidence 45667888666666666999999988898885 4444432 234666666 88765544
No 276
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=51.90 E-value=29 Score=29.03 Aligned_cols=70 Identities=9% Similarity=-0.013 Sum_probs=38.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI-ILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~-~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
..+||..+|--|.++|..-...|..+.|+.-... ..+.+ ..+.+|.++..+..+- +.++..+...+..++
T Consensus 4 ~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 75 (254)
T 3kzv_A 4 VILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARS-EAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKG 75 (254)
T ss_dssp EEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESC-HHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHhcCCCeEEEEecCC-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 5678888888888888776666543333332222 23333 3344566666555432 333444445555444
No 277
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=51.80 E-value=53 Score=30.74 Aligned_cols=50 Identities=8% Similarity=-0.043 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 020805 51 RIGYSMISDAEA-KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 101 (321)
Q Consensus 51 R~a~~~l~~a~~-~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp 101 (321)
||..+.+..+.+ .| ....+.+|+....||-|..+|.....+|.+++.+..
T Consensus 233 ~Gv~~~~~~~l~~~G-~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD 283 (470)
T 2bma_A 233 YGLVYFVLEVLKSLN-IPVEKQTAVVSGSGNVALYCVQKLLHLNVKVLTLSD 283 (470)
T ss_dssp HHHHHHHHHHHHTTT-CCGGGCEEEEECSSHHHHHHHHHHHHTTCEECEEEE
T ss_pred HHHHHHHHHHHHhcc-CCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEEe
Confidence 577777777665 34 332346788888899999998888888887775544
No 278
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=51.78 E-value=71 Score=29.99 Aligned_cols=91 Identities=21% Similarity=0.169 Sum_probs=59.4
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 150 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 150 (321)
++|.....|+-|.++|..++.+|++++++=|. ..+.......|.++. +. .++.++. +.+++..
T Consensus 258 ktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~---~~~~~~a~~~g~~~~------~l-------~ell~~a-DiVi~~~ 320 (479)
T 1v8b_A 258 KIVVICGYGDVGKGCASSMKGLGARVYITEID---PICAIQAVMEGFNVV------TL-------DEIVDKG-DFFITCT 320 (479)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSC---HHHHHHHHTTTCEEC------CH-------HHHTTTC-SEEEECC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCC---hhhHHHHHHcCCEec------CH-------HHHHhcC-CEEEECC
Confidence 56777889999999999999999988877443 333323345677541 11 2233333 6666553
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchh
Q 020805 151 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGT 188 (321)
Q Consensus 151 ~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~ 188 (321)
.+. ..+..|.++++ +++.+++-+|.|+.
T Consensus 321 -~t~-------~lI~~~~l~~M--K~gailiNvgrg~~ 348 (479)
T 1v8b_A 321 -GNV-------DVIKLEHLLKM--KNNAVVGNIGHFDD 348 (479)
T ss_dssp -SSS-------SSBCHHHHTTC--CTTCEEEECSSTTT
T ss_pred -Chh-------hhcCHHHHhhc--CCCcEEEEeCCCCc
Confidence 122 12334777777 57899999999987
No 279
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=51.66 E-value=21 Score=29.93 Aligned_cols=24 Identities=25% Similarity=0.339 Sum_probs=21.6
Q ss_pred CChHHHHHHHHHHHcCCeEEEEec
Q 020805 78 SGNTGIGLAFMAAAKQYRLIITMP 101 (321)
Q Consensus 78 sGN~g~AlA~aa~~~G~~~~ivvp 101 (321)
||-.|.++|.++...|.+++++..
T Consensus 33 Sg~iG~aiA~~~~~~Ga~V~l~~~ 56 (226)
T 1u7z_A 33 SGKMGFAIAAAAARRGANVTLVSG 56 (226)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccHHHHHHHHHHHHCCCEEEEEEC
Confidence 699999999999999999988754
No 280
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=51.33 E-value=60 Score=30.64 Aligned_cols=91 Identities=19% Similarity=0.155 Sum_probs=59.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 150 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 150 (321)
++|.....|+-|.++|..++.+|.+++++=+. ..+.......|.++. +. .++.++. +.+++..
T Consensus 278 ktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~---~~~~~~a~~~G~~~~------~l-------~ell~~a-DiVi~~~ 340 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSLRGLGATVWVTEID---PICALQAAMEGYRVV------TM-------EYAADKA-DIFVTAT 340 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSC---HHHHHHHHTTTCEEC------CH-------HHHTTTC-SEEEECS
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC---hHhHHHHHHcCCEeC------CH-------HHHHhcC-CEEEECC
Confidence 56777889999999999999999987777433 333323334677641 11 2233333 5666543
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchh
Q 020805 151 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGT 188 (321)
Q Consensus 151 ~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~ 188 (321)
.+. ..+..|.++++ +++.+++-+|.|+.
T Consensus 341 -~t~-------~lI~~~~l~~M--K~gAilINvgrg~v 368 (494)
T 3d64_A 341 -GNY-------HVINHDHMKAM--RHNAIVCNIGHFDS 368 (494)
T ss_dssp -SSS-------CSBCHHHHHHC--CTTEEEEECSSSSC
T ss_pred -Ccc-------cccCHHHHhhC--CCCcEEEEcCCCcc
Confidence 121 22345778887 57899999999986
No 281
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=51.19 E-value=38 Score=28.56 Aligned_cols=71 Identities=20% Similarity=0.185 Sum_probs=42.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHHHH-cCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL-ERRIILRA-FGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~-~~~~~~~~-~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
..+||..+|--|.++|......|.+++++-...... ...+.++. .|.++..+..+- +.++..+...+..++
T Consensus 22 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 95 (266)
T 4egf_A 22 RALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEA 95 (266)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 678888888889999999889999877665432111 11223333 677777665432 234444445555444
No 282
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=51.17 E-value=1.2e+02 Score=26.27 Aligned_cols=118 Identities=19% Similarity=0.156 Sum_probs=67.2
Q ss_pred EEeeCCChHHHHHHHHHHHcC----CeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEc
Q 020805 73 LIEPTSGNTGIGLAFMAAAKQ----YRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYML 148 (321)
Q Consensus 73 vv~~SsGN~g~AlA~aa~~~G----~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 148 (321)
|..-..||.|.++|..-.+.| .+++++-+.. ...+.+.++.+|.++ ... .. +..++- +.+++
T Consensus 25 I~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~-~~~~~~~l~~~G~~~--~~~---~~-------e~~~~a-DvVil 90 (322)
T 2izz_A 25 VGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM-DLATVSALRKMGVKL--TPH---NK-------ETVQHS-DVLFL 90 (322)
T ss_dssp EEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT-TSHHHHHHHHHTCEE--ESC---HH-------HHHHHC-SEEEE
T ss_pred EEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc-cHHHHHHHHHcCCEE--eCC---hH-------HHhccC-CEEEE
Confidence 555678999999999988899 5666653332 213556666788764 221 11 222333 55554
Q ss_pred CCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEecCC
Q 020805 149 QQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTE 212 (321)
Q Consensus 149 ~~~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~~~~ 212 (321)
.-- +. ....+..+|...+ .++.+|+.+.+|-...-+...+....+..+++..-|..
T Consensus 91 av~--~~----~~~~vl~~l~~~l--~~~~ivvs~s~gi~~~~l~~~l~~~~~~~~vv~~~p~~ 146 (322)
T 2izz_A 91 AVK--PH----IIPFILDEIGADI--EDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIRCMTNT 146 (322)
T ss_dssp CSC--GG----GHHHHHHHHGGGC--CTTCEEEECCTTCCHHHHHHHHHTTSSCCEEEEEECCG
T ss_pred EeC--HH----HHHHHHHHHHhhc--CCCCEEEEeCCCCCHHHHHHHHhhcCCCCeEEEEeCCc
Confidence 221 11 1222333444333 35778888776666555555565544566888776643
No 283
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=51.07 E-value=54 Score=28.53 Aligned_cols=51 Identities=8% Similarity=0.025 Sum_probs=35.0
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 020805 72 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 123 (321)
Q Consensus 72 ~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~ 123 (321)
.++..++|..+..++..+- ..-.-.|+++...-......++..|++++.++
T Consensus 71 ~v~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~ 121 (371)
T 2e7j_A 71 VARVTNGAREAKFAVMHSL-AKKDAWVVMDENCHYSSYVAAERAGLNIALVP 121 (371)
T ss_dssp EEEEESSHHHHHHHHHHHH-CCTTCEEEEETTCCHHHHHHHHHTTCEEEEEC
T ss_pred EEEEeCChHHHHHHHHHHH-hCCCCEEEEccCcchHHHHHHHHcCCeEEEee
Confidence 4666666677776666654 33334566666666666666899999999998
No 284
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=50.82 E-value=44 Score=28.07 Aligned_cols=72 Identities=13% Similarity=0.093 Sum_probs=43.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcC-CEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFG-AELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-~~~~~~~~~~G-a~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
...+||..+|--|.++|......|.+++++-..... ....+.++..| .++..+..+- +.++..+...+..++
T Consensus 11 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (262)
T 3pk0_A 11 RSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEE 85 (262)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 367888888888999999988999987776543211 12233455555 5665554332 333444444544444
No 285
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=50.80 E-value=70 Score=26.71 Aligned_cols=71 Identities=14% Similarity=0.037 Sum_probs=41.9
Q ss_pred eEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH-cCC-EEEEeCCCCChhHHHHHHHHHHHhC
Q 020805 71 SVLIEPTS--GNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRA-FGA-ELVLTDPAKGMKGAVQKAEEILAKT 142 (321)
Q Consensus 71 ~~vv~~Ss--GN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~-~Ga-~v~~~~~~~~~~~~~~~a~~~~~~~ 142 (321)
..+||..+ |--|.++|......|.+++++..........+.+.. .|. .++.++- .+.++..+...+..++.
T Consensus 11 ~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~~~ 85 (265)
T 1qsg_A 11 RILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDV-AEDASIDTMFAELGKVW 85 (265)
T ss_dssp EEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCT-TCHHHHHHHHHHHHTTC
T ss_pred EEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccC-CCHHHHHHHHHHHHHHc
Confidence 56788776 789999999988899997777654433344555543 333 2333343 23334444445554443
No 286
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=50.77 E-value=54 Score=27.48 Aligned_cols=72 Identities=18% Similarity=0.096 Sum_probs=42.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHHHHc--CCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL-ERRIILRAF--GAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~-~~~~~~~~~--Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
...+||..+|.-|.++|......|.+++++....... ...+.++.. |.++..+..+- +.++..+...+..++
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 89 (267)
T 1iy8_A 14 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER 89 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3678888889999999999888999877765432111 112233333 66666554332 233334444444333
No 287
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=50.75 E-value=50 Score=27.37 Aligned_cols=72 Identities=11% Similarity=0.133 Sum_probs=44.4
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHH-HHcCCEEEEeCCCC-ChhHHHHHHHHHHHhC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL-ERRIIL-RAFGAELVLTDPAK-GMKGAVQKAEEILAKT 142 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~-~~~~~~-~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~~ 142 (321)
..+||..+|.-|.++|......|.+++++....... ...+.+ +.++.++..+..+- +.++..+...+..++.
T Consensus 16 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 90 (265)
T 1h5q_A 16 TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL 90 (265)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred EEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 578888889999999999888998887776543332 222233 33476766554432 2333444445554443
No 288
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=50.72 E-value=70 Score=28.47 Aligned_cols=92 Identities=12% Similarity=0.085 Sum_probs=52.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 150 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 150 (321)
++|-.-.-|+.|.++|..++.+|++++++-+.... ..+.+ .+. + ..++.++. +...+.-
T Consensus 172 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~--------~~~~~--~~~---s-------l~ell~~a-DvVil~v 230 (340)
T 4dgs_A 172 KRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLS--------GVDWI--AHQ---S-------PVDLARDS-DVLAVCV 230 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCT--------TSCCE--ECS---S-------HHHHHHTC-SEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCccc--------ccCce--ecC---C-------HHHHHhcC-CEEEEeC
Confidence 56777788999999999999999998777554322 12322 111 1 12344444 5555433
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhH
Q 020805 151 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI 189 (321)
Q Consensus 151 ~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~~ 189 (321)
..++.. ...+..++++.+ +++.+++-++.|+.+
T Consensus 231 P~t~~t----~~li~~~~l~~m--k~gailIN~aRG~vv 263 (340)
T 4dgs_A 231 AASAAT----QNIVDASLLQAL--GPEGIVVNVARGNVV 263 (340)
T ss_dssp --------------CHHHHHHT--TTTCEEEECSCC---
T ss_pred CCCHHH----HHHhhHHHHhcC--CCCCEEEECCCCccc
Confidence 222222 233456777887 478899999999876
No 289
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=50.59 E-value=50 Score=28.36 Aligned_cols=70 Identities=14% Similarity=0.077 Sum_probs=40.8
Q ss_pred eEEEeeCCC--hHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH-HHcCC-EEEEeCCCCChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSG--NTGIGLAFMAAAKQYRLIITMPASMSLERRIIL-RAFGA-ELVLTDPAKGMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsG--N~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~-~~~Ga-~v~~~~~~~~~~~~~~~a~~~~~~ 141 (321)
..|||..+| --|.++|..-...|.+++++-........++.+ +..|. ..+.++- .+.++..+...+..++
T Consensus 32 ~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~ 105 (296)
T 3k31_A 32 KGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDV-SDAESVDNMFKVLAEE 105 (296)
T ss_dssp EEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCT-TCHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCC-CCHHHHHHHHHHHHHH
Confidence 667777766 778889988888999977776554333333333 33443 2333333 2334445555555444
No 290
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=50.44 E-value=45 Score=28.19 Aligned_cols=72 Identities=11% Similarity=0.077 Sum_probs=46.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC---------CHHH----HHHHHHcCCEEEEeCCCC-ChhHHHHHH
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM---------SLER----RIILRAFGAELVLTDPAK-GMKGAVQKA 135 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~---------~~~~----~~~~~~~Ga~v~~~~~~~-~~~~~~~~a 135 (321)
...+||..+|--|.++|..-...|.+++++-.... ...+ ...++..|.++..+..+- +.++..+..
T Consensus 11 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 90 (287)
T 3pxx_A 11 KVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSREL 90 (287)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence 36788888899999999999999999877654311 1222 234566788887765442 333444445
Q ss_pred HHHHHh
Q 020805 136 EEILAK 141 (321)
Q Consensus 136 ~~~~~~ 141 (321)
.+..++
T Consensus 91 ~~~~~~ 96 (287)
T 3pxx_A 91 ANAVAE 96 (287)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555444
No 291
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=50.41 E-value=1.1e+02 Score=25.35 Aligned_cols=32 Identities=19% Similarity=0.131 Sum_probs=25.2
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 101 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp 101 (321)
...+||..+|--|.++|..-...|.+++++-.
T Consensus 13 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r 44 (252)
T 3f1l_A 13 RIILVTGASDGIGREAAMTYARYGATVILLGR 44 (252)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 36788888888889998888888888766643
No 292
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=50.28 E-value=49 Score=28.00 Aligned_cols=55 Identities=16% Similarity=0.084 Sum_probs=43.2
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 020805 69 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 124 (321)
Q Consensus 69 g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~ 124 (321)
|+..|||.+++--|.++|..-...|.++++.- .+..+...+.++..|.++..+..
T Consensus 9 GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~-r~~~~~~~~~~~~~g~~~~~~~~ 63 (247)
T 4hp8_A 9 GRKALVTGANTGLGQAIAVGLAAAGAEVVCAA-RRAPDETLDIIAKDGGNASALLI 63 (247)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE-SSCCHHHHHHHHHTTCCEEEEEC
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEe-CCcHHHHHHHHHHhCCcEEEEEc
Confidence 34778888888889999999999999977664 34456778888999998877654
No 293
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=50.05 E-value=63 Score=28.83 Aligned_cols=46 Identities=13% Similarity=0.218 Sum_probs=34.1
Q ss_pred ChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHH----HHHcCCEEEEeCC
Q 020805 79 GNTGIGLAFMAAAKQYRLIITMPASM--SLERRII----LRAFGAELVLTDP 124 (321)
Q Consensus 79 GN~g~AlA~aa~~~G~~~~ivvp~~~--~~~~~~~----~~~~Ga~v~~~~~ 124 (321)
+|.+.|++.+++++|++++++.|+.- ++.-++. .+..|+++..+..
T Consensus 185 ~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d 236 (339)
T 4a8t_A 185 TQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDD 236 (339)
T ss_dssp CHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEEEECC
T ss_pred chhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEECC
Confidence 78999999999999999999999853 3333332 3567888877763
No 294
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=49.82 E-value=1.1e+02 Score=25.35 Aligned_cols=31 Identities=23% Similarity=0.214 Sum_probs=23.1
Q ss_pred eEEEeeCCC-hHHHHHHHHHHHcCCeEEEEec
Q 020805 71 SVLIEPTSG-NTGIGLAFMAAAKQYRLIITMP 101 (321)
Q Consensus 71 ~~vv~~SsG-N~g~AlA~aa~~~G~~~~ivvp 101 (321)
..+||..+| --|.++|......|.+++++-.
T Consensus 24 ~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r 55 (266)
T 3o38_A 24 VVLVTAAAGTGIGSTTARRALLEGADVVISDY 55 (266)
T ss_dssp EEEESSCSSSSHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEECCCCCchHHHHHHHHHHCCCEEEEecC
Confidence 556766656 4899999988888988766644
No 295
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=49.80 E-value=58 Score=30.73 Aligned_cols=95 Identities=15% Similarity=0.145 Sum_probs=60.9
Q ss_pred CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCe
Q 020805 66 ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNA 145 (321)
Q Consensus 66 ~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~ 145 (321)
..+| ++|+....|+-|..+|..++.+|.+++++ +..+.+.+..+.+|+++ + +.++ ..+.- +.
T Consensus 271 ~l~G-ktV~IiG~G~IG~~~A~~lka~Ga~Viv~---d~~~~~~~~A~~~Ga~~--~----~l~e-------~l~~a-Dv 332 (494)
T 3ce6_A 271 LIGG-KKVLICGYGDVGKGCAEAMKGQGARVSVT---EIDPINALQAMMEGFDV--V----TVEE-------AIGDA-DI 332 (494)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHTTCEEEEE---CSCHHHHHHHHHTTCEE--C----CHHH-------HGGGC-SE
T ss_pred CCCc-CEEEEEccCHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHHcCCEE--e----cHHH-------HHhCC-CE
Confidence 4455 55777788999999999999999976655 23456666777889974 2 1222 22333 55
Q ss_pred EEcCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchh
Q 020805 146 YMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGT 188 (321)
Q Consensus 146 ~~~~~~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~ 188 (321)
++... .++. .+..+.++.+ ++..+++-+|.+..
T Consensus 333 Vi~at-gt~~-------~i~~~~l~~m--k~ggilvnvG~~~~ 365 (494)
T 3ce6_A 333 VVTAT-GNKD-------IIMLEHIKAM--KDHAILGNIGHFDN 365 (494)
T ss_dssp EEECS-SSSC-------SBCHHHHHHS--CTTCEEEECSSSGG
T ss_pred EEECC-CCHH-------HHHHHHHHhc--CCCcEEEEeCCCCC
Confidence 55443 1221 2234666776 46788888888775
No 296
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=49.79 E-value=1.1e+02 Score=25.38 Aligned_cols=147 Identities=14% Similarity=0.116 Sum_probs=77.9
Q ss_pred HHHHHHHHHcCCCCCCCeEEEeeCCC-hHHHHHHHHHHHcCCeEEEEecCCCC-------------HHHHHHHHH--cCC
Q 020805 54 YSMISDAEAKGLITPGESVLIEPTSG-NTGIGLAFMAAAKQYRLIITMPASMS-------------LERRIILRA--FGA 117 (321)
Q Consensus 54 ~~~l~~a~~~g~~~~g~~~vv~~SsG-N~g~AlA~aa~~~G~~~~ivvp~~~~-------------~~~~~~~~~--~Ga 117 (321)
...+..+..++. +.++..... .........+...|+|++.+-..... ..-.+.+.. .|.
T Consensus 51 ~~~~~~l~~~~v-----dgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~V~~D~~~~g~~~~~~l~~~~~g~ 125 (291)
T 3l49_A 51 VSQIQTLIAQKP-----DAIIEQLGNLDVLNPWLQKINDAGIPLFTVDTATPHAINNTTSNNYSIGAELALQMVADLGGK 125 (291)
T ss_dssp HHHHHHHHHHCC-----SEEEEESSCHHHHHHHHHHHHHTTCCEEEESCCCTTCSEEEEECHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCC-----CEEEEeCCChhhhHHHHHHHHHCCCcEEEecCCCCCcCceEecChHHHHHHHHHHHHHHcCCC
Confidence 344555666665 556655433 33444555577789998776432110 111223333 454
Q ss_pred -EEEEeCCCCChh---HHHHHHHHHHHhCCCeEEcCCC-C--CCcchhhhhhchHHHHHhhhCC---CCCEEEEecCCch
Q 020805 118 -ELVLTDPAKGMK---GAVQKAEEILAKTPNAYMLQQF-E--NPANPKIHYETTGPELWKGSGG---RIDALVSGIGTGG 187 (321)
Q Consensus 118 -~v~~~~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~-~--~~~~~~~g~~~~~~Ei~~ql~~---~~d~vv~p~G~Gg 187 (321)
+|.++.+..+.. ++.+-.++..++.++.-.+... . .......+ .....+++++- + +||+||+ .+..
T Consensus 126 ~~i~~i~~~~~~~~~~~R~~gf~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~-~~~~~~~ai~~--~~d~ 201 (291)
T 3l49_A 126 GNVLVFNGFYSVPVCKIRYDQMKYVLEAFPDVKIIEPELRDVIPNTIQSA-YSNVTDMLTKY-PNEGDVGAIWA--CWDV 201 (291)
T ss_dssp EEEEEECSCTTSHHHHHHHHHHHHHHHTCTTEEECSSCBCCCSSSHHHHH-HHHHHHHHHHC-CSTTSCCEEEE--SSHH
T ss_pred ceEEEEeCCCCCchHHHHHHHHHHHHHHCCCCEEEeeeccCCCCCCHHHH-HHHHHHHHHhC-CCcCCcCEEEE--CCCc
Confidence 566665433222 2333334445554333322221 1 11111222 23344555554 4 7999986 4667
Q ss_pred hHHHHHHHHHhcCC-CcEEEEEe
Q 020805 188 TITGAGKFLKEKNP-NIKLYGIE 209 (321)
Q Consensus 188 ~~aGi~~~~k~~~~-~~~vigv~ 209 (321)
.+.|+..++++.+- ++.|+|.+
T Consensus 202 ~a~g~~~al~~~g~~di~vvg~d 224 (291)
T 3l49_A 202 PMIGATQALQAAGRTDIRTYGVD 224 (291)
T ss_dssp HHHHHHHHHHHTTCCSCEEEEEE
T ss_pred hHHHHHHHHHHcCCCCeEEEEec
Confidence 88899999998875 78888887
No 297
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=49.62 E-value=1.3e+02 Score=26.27 Aligned_cols=105 Identities=16% Similarity=0.107 Sum_probs=64.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 150 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 150 (321)
.+|..-..|+.|.++|..++.+|++++++-+...... ....+|.+.. +.+ ++.++- +...+.-
T Consensus 156 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~---~~~~~g~~~~------~l~-------e~l~~a-DvVi~~v 218 (330)
T 2gcg_A 156 STVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPE---EAAEFQAEFV------STP-------ELAAQS-DFIVVAC 218 (330)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHH---HHHTTTCEEC------CHH-------HHHHHC-SEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchh---HHHhcCceeC------CHH-------HHHhhC-CEEEEeC
Confidence 4577778899999999999999999888876543332 2345565431 112 223343 5555433
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchh--HHHHHHHHHh
Q 020805 151 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGT--ITGAGKFLKE 198 (321)
Q Consensus 151 ~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~--~aGi~~~~k~ 198 (321)
-.++.. ...+..++++.+ +++.+++-+++|.. ...+..+++.
T Consensus 219 p~~~~t----~~~i~~~~~~~m--k~gailIn~srg~~v~~~aL~~aL~~ 262 (330)
T 2gcg_A 219 SLTPAT----EGLCNKDFFQKM--KETAVFINISRGDVVNQDDLYQALAS 262 (330)
T ss_dssp CCCTTT----TTCBSHHHHHHS--CTTCEEEECSCGGGBCHHHHHHHHHH
T ss_pred CCChHH----HHhhCHHHHhcC--CCCcEEEECCCCcccCHHHHHHHHHc
Confidence 222221 122335677777 46788899999854 4677777775
No 298
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=49.50 E-value=46 Score=28.27 Aligned_cols=70 Identities=17% Similarity=0.109 Sum_probs=40.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL-ERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~-~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
..+||..+|.-|.++|......|.+++++-...... ...+.++..| ++..+..+- +.++..+...+..++
T Consensus 31 ~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (276)
T 2b4q_A 31 IALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGEL 102 (276)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHHh
Confidence 678888889999999999889998876664322111 1122333345 666555432 223333444444443
No 299
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=49.42 E-value=54 Score=27.94 Aligned_cols=71 Identities=10% Similarity=0.068 Sum_probs=42.6
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHHHH-cCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL-ERRIILRA-FGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~-~~~~~~~~-~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
..+||..+|.-|.++|......|.+++++....... ...+.++. +|.++..+..+- +.++..+...+..++
T Consensus 28 ~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 101 (302)
T 1w6u_A 28 VAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV 101 (302)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 678888999999999999999999877765432111 11222322 276776655432 233444444444444
No 300
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=49.35 E-value=38 Score=28.68 Aligned_cols=71 Identities=14% Similarity=0.026 Sum_probs=42.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
..+||..+|--|.++|..-...|.+++++-..... ....+.++..|.++..+..+- +.++..+...+..++
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (270)
T 3ftp_A 30 VAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKE 102 (270)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 67888888888899999888899987776553221 122344555666655444322 333444444544444
No 301
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=49.34 E-value=56 Score=29.04 Aligned_cols=45 Identities=13% Similarity=-0.023 Sum_probs=34.4
Q ss_pred ChHHHHHHHHHHHcCCeEEEEecCCC----CHHHHHHHHH------cCCEEEEeC
Q 020805 79 GNTGIGLAFMAAAKQYRLIITMPASM----SLERRIILRA------FGAELVLTD 123 (321)
Q Consensus 79 GN~g~AlA~aa~~~G~~~~ivvp~~~----~~~~~~~~~~------~Ga~v~~~~ 123 (321)
.|.+.|++.+++++|++++++.|+.- ++.-++.++. .|+++..+.
T Consensus 172 ~~va~Sl~~~~~~~G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~ 226 (328)
T 3grf_A 172 NNVTYDLMRGCALLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFH 226 (328)
T ss_dssp SHHHHHHHHHHHHHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEES
T ss_pred cchHHHHHHHHHHcCCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEc
Confidence 58999999999999999999999853 3333333333 688898876
No 302
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=49.31 E-value=63 Score=26.93 Aligned_cols=70 Identities=13% Similarity=0.049 Sum_probs=41.1
Q ss_pred eEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH-cC-CEEEEeCCCCChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTS--GNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRA-FG-AELVLTDPAKGMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~Ss--GN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~-~G-a~v~~~~~~~~~~~~~~~a~~~~~~ 141 (321)
..+||..+ |.-|.++|......|.+++++..........+.+.. .| ..++.++-. +.++..+...+..++
T Consensus 10 ~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~~ 83 (261)
T 2wyu_A 10 KALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVT-QDEELDALFAGVKEA 83 (261)
T ss_dssp EEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTT-CHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCC-CHHHHHHHHHHHHHH
Confidence 66788876 889999999988889997777554322334444433 34 334444432 333444444444443
No 303
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=49.19 E-value=1.2e+02 Score=25.39 Aligned_cols=36 Identities=14% Similarity=0.203 Sum_probs=27.6
Q ss_pred CCCCEEEEecCCchhHHHHHHHHHhcC----CCcEEEEEecC
Q 020805 174 GRIDALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIEPT 211 (321)
Q Consensus 174 ~~~d~vv~p~G~Gg~~aGi~~~~k~~~----~~~~vigv~~~ 211 (321)
++||+||+. +..++.|+..++++.+ .++.|+|.+..
T Consensus 187 ~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~di~vig~d~~ 226 (288)
T 3gv0_A 187 DRPDGIVSI--SGSSTIALVAGFEAAGVKIGEDVDIVSKQSA 226 (288)
T ss_dssp SCCSEEEES--CHHHHHHHHHHHHTTTCCTTTSCEEEEEESS
T ss_pred CCCcEEEEc--CcHHHHHHHHHHHHcCCCCCCceEEEEecCh
Confidence 568999864 5677789999999876 35788888733
No 304
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=49.18 E-value=1.2e+02 Score=25.60 Aligned_cols=74 Identities=18% Similarity=0.146 Sum_probs=47.3
Q ss_pred HHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCc
Q 020805 107 ERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTG 186 (321)
Q Consensus 107 ~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~G 186 (321)
.-.+.+...|++|+.++.+ .+...+.+.++.+.. +.....+. |-.. ......+..++.++. +.+|.+|-.+|..
T Consensus 24 aia~~la~~Ga~Vvi~~~~--~~~~~~~~~~l~~~g-~~~~~~~~-Dv~~-~~~v~~~~~~~~~~~-G~iDiLVNNAG~~ 97 (255)
T 4g81_D 24 AYAEGLAAAGARVILNDIR--ATLLAESVDTLTRKG-YDAHGVAF-DVTD-ELAIEAAFSKLDAEG-IHVDILINNAGIQ 97 (255)
T ss_dssp HHHHHHHHTTCEEEECCSC--HHHHHHHHHHHHHTT-CCEEECCC-CTTC-HHHHHHHHHHHHHTT-CCCCEEEECCCCC
T ss_pred HHHHHHHHCCCEEEEEECC--HHHHHHHHHHHHhcC-CcEEEEEe-eCCC-HHHHHHHHHHHHHHC-CCCcEEEECCCCC
Confidence 4466788899999999864 344455556665554 33333343 3333 344556666777777 6799999888853
No 305
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=49.16 E-value=77 Score=26.24 Aligned_cols=68 Identities=4% Similarity=0.009 Sum_probs=41.3
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHH-HHHcCCEEEEeCCCCC-hhHHHHHHHHHHH
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRII-LRAFGAELVLTDPAKG-MKGAVQKAEEILA 140 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~-~~~~Ga~v~~~~~~~~-~~~~~~~a~~~~~ 140 (321)
...+||..+|.-|.++|......|.+++++... ..+.+. .+.+|.++..+..+-. .++..+...+..+
T Consensus 7 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 76 (253)
T 1hxh_A 7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDIN---EAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQR 76 (253)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSC---HHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 367888888999999999988899987666332 233322 2334767766654432 2333344444433
No 306
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=49.08 E-value=1.2e+02 Score=27.57 Aligned_cols=112 Identities=13% Similarity=0.162 Sum_probs=51.1
Q ss_pred CeEEEEecCCCCHHHHHHHHHcC-CEEEEeCCCCChhH--HHHHHHHHHHhCCCeEEc-CC-CCCCcchhhhhhchHHHH
Q 020805 94 YRLIITMPASMSLERRIILRAFG-AELVLTDPAKGMKG--AVQKAEEILAKTPNAYML-QQ-FENPANPKIHYETTGPEL 168 (321)
Q Consensus 94 ~~~~ivvp~~~~~~~~~~~~~~G-a~v~~~~~~~~~~~--~~~~a~~~~~~~~~~~~~-~~-~~~~~~~~~g~~~~~~Ei 168 (321)
.|..|++-.+.-..--+.++.+| -++.++.+...... ..+...+..++.+-.+.+ +. -.||.. ....-+.+.
T Consensus 20 ~p~~i~~G~g~l~~l~~~l~~~g~~r~liVtd~~~~~~~g~~~~v~~~L~~~g~~~~~f~~v~~~p~~---~~v~~~~~~ 96 (407)
T 1vlj_A 20 NPTKIVFGRGTIPKIGEEIKNAGIRKVLFLYGGGSIKKNGVYDQVVDSLKKHGIEWVEVSGVKPNPVL---SKVHEAVEV 96 (407)
T ss_dssp CCCEEEESTTCGGGHHHHHHHTTCCEEEEEECSSHHHHSSHHHHHHHHHHHTTCEEEEECCCCSSCBH---HHHHHHHHH
T ss_pred cCCeEEECcCHHHHHHHHHHHcCCCeEEEEECchHHhhccHHHHHHHHHHHcCCeEEEecCccCCCCH---HHHHHHHHH
Confidence 34455555554333345566677 66666653222222 233344433433112222 11 112221 122222333
Q ss_pred HhhhCCCCCEEEEecCCchhHHHHHHHHHhc-----------------CCCcEEEEEecCC
Q 020805 169 WKGSGGRIDALVSGIGTGGTITGAGKFLKEK-----------------NPNIKLYGIEPTE 212 (321)
Q Consensus 169 ~~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~-----------------~~~~~vigv~~~~ 212 (321)
+.+ .++| +|+++|+|..+ =+++++... .+.+++|.|-+..
T Consensus 97 ~~~--~~~D-~IIavGGGsvi-D~AK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTa 153 (407)
T 1vlj_A 97 AKK--EKVE-AVLGVGGGSVV-DSAKAVAAGALYEGDIWDAFIGKYQIEKALPIFDVLTIS 153 (407)
T ss_dssp HHH--TTCS-EEEEEESHHHH-HHHHHHHHHTTCSSCGGGGGGTSCCCCCCCCEEEEECSC
T ss_pred HHh--cCCC-EEEEeCChhHH-HHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCC
Confidence 333 3567 66788887764 233333221 1456788887664
No 307
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=48.91 E-value=44 Score=29.09 Aligned_cols=71 Identities=14% Similarity=0.115 Sum_probs=45.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC---------CCHHH----HHHHHHcCCEEEEeCCCC-ChhHHHHHHH
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS---------MSLER----RIILRAFGAELVLTDPAK-GMKGAVQKAE 136 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~---------~~~~~----~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~ 136 (321)
..|||..+|--|.++|..-...|.+++++-... ....+ .+.++..|.++..+..+- +.++..+...
T Consensus 48 ~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 127 (317)
T 3oec_A 48 VAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVVD 127 (317)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence 678888888899999999889999988874321 11222 344567788887765442 3334444445
Q ss_pred HHHHh
Q 020805 137 EILAK 141 (321)
Q Consensus 137 ~~~~~ 141 (321)
+..++
T Consensus 128 ~~~~~ 132 (317)
T 3oec_A 128 EALAE 132 (317)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55444
No 308
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=48.79 E-value=49 Score=28.81 Aligned_cols=73 Identities=19% Similarity=0.206 Sum_probs=44.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHHHHcCC--EEEEeCCCC-ChhHHHHHHHHHHHhC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL-ERRIILRAFGA--ELVLTDPAK-GMKGAVQKAEEILAKT 142 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~-~~~~~~~~~Ga--~v~~~~~~~-~~~~~~~~a~~~~~~~ 142 (321)
...+||..+|--|.++|......|.+++++....... ...+.++..|. ++..+..+- +.++..+...+..+..
T Consensus 9 k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 9 RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp CEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 3678888889999999999989999977776543221 22334455554 555554332 3334444455555544
No 309
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=48.48 E-value=67 Score=26.63 Aligned_cols=68 Identities=16% Similarity=0.109 Sum_probs=42.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI-ILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~-~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
..+||..+|--|.++|......|.+++++-.. ..+.+ ..+.++.++..+..+- +.++..+...+..++
T Consensus 11 ~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (261)
T 3n74_A 11 VALITGAGSGFGEGMAKRFAKGGAKVVIVDRD---KAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSK 80 (261)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCC---HHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 67888888889999999999999987766433 22222 3345576666655432 333444445555444
No 310
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=48.47 E-value=56 Score=28.66 Aligned_cols=51 Identities=24% Similarity=0.333 Sum_probs=34.3
Q ss_pred HHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHc
Q 020805 60 AEA-KGLITPGESVLIEPTSGNTGIGLAFMAAAKQY-RLIITMPASMSLERRIILRAF 115 (321)
Q Consensus 60 a~~-~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~-~~~ivvp~~~~~~~~~~~~~~ 115 (321)
+.+ ...+ +|.+.+|... |.-|.+++..|+.+|. +++++.+ ++.+++.++.+
T Consensus 156 ~l~~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~---~~~~~~~~~~l 208 (343)
T 2dq4_A 156 TVYAGSGV-SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDP---NPYRLAFARPY 208 (343)
T ss_dssp HHHSTTCC-TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECS---CHHHHGGGTTT
T ss_pred HHHHhCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHHHHh
Confidence 344 5556 7766556555 9999999999999998 6666533 34566655555
No 311
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=48.46 E-value=71 Score=32.03 Aligned_cols=59 Identities=22% Similarity=0.274 Sum_probs=41.5
Q ss_pred CCCCeEEEeeCCChHHHHHHHHHH-HcCCeEEEEecCC---C--CHHHHHHHHHcCCEEEEeCCC
Q 020805 67 TPGESVLIEPTSGNTGIGLAFMAA-AKQYRLIITMPAS---M--SLERRIILRAFGAELVLTDPA 125 (321)
Q Consensus 67 ~~g~~~vv~~SsGN~g~AlA~aa~-~~G~~~~ivvp~~---~--~~~~~~~~~~~Ga~v~~~~~~ 125 (321)
.+++..+|+..+|-.|.++|..-. ..|.+.++++..+ . ....++.++..|+++..+..+
T Consensus 528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~D 592 (795)
T 3slk_A 528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACD 592 (795)
T ss_dssp CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECC
T ss_pred ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEee
Confidence 345566777777888888888765 7899766666543 2 234567788899999877654
No 312
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=48.34 E-value=50 Score=27.56 Aligned_cols=72 Identities=17% Similarity=0.132 Sum_probs=46.9
Q ss_pred eEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCCCH--HHHHHH-HHcCCEEEEeCCCC-ChhHHHHHHHHHHHhC
Q 020805 71 SVLIEPTS--GNTGIGLAFMAAAKQYRLIITMPASMSL--ERRIIL-RAFGAELVLTDPAK-GMKGAVQKAEEILAKT 142 (321)
Q Consensus 71 ~~vv~~Ss--GN~g~AlA~aa~~~G~~~~ivvp~~~~~--~~~~~~-~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~~ 142 (321)
..+||..+ +--|.++|......|.+++++....... ..++.+ +.+|.++..+..+- +.++..+...+..++.
T Consensus 22 ~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 99 (267)
T 3gdg_A 22 VVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADF 99 (267)
T ss_dssp EEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHc
Confidence 66777766 6788999998888999988876655433 333343 45688887776543 3344455555555553
No 313
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=48.18 E-value=83 Score=29.16 Aligned_cols=52 Identities=17% Similarity=0.093 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC
Q 020805 51 RIGYSMISDAEA-KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS 103 (321)
Q Consensus 51 R~a~~~l~~a~~-~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~ 103 (321)
||+.+.+..+.+ .|. ...+.+|+....||-|..+|.....+|.+++.+...+
T Consensus 216 ~Gv~~~~~~~~~~~g~-~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~ 268 (440)
T 3aog_A 216 RGVFITAAAAAEKIGL-QVEGARVAIQGFGNVGNAAARAFHDHGARVVAVQDHT 268 (440)
T ss_dssp HHHHHHHHHHHHHHTC-CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred HHHHHHHHHHHHhcCC-CccCCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 577777776654 453 3234667778899999999988888888877665443
No 314
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=48.16 E-value=70 Score=26.24 Aligned_cols=32 Identities=6% Similarity=0.119 Sum_probs=26.4
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 102 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~ 102 (321)
..+||..+|--|.++|......|.+++++-..
T Consensus 5 ~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~ 36 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLVERGHQVSMMGRR 36 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 67888888999999999988999987766443
No 315
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=48.08 E-value=1.1e+02 Score=26.62 Aligned_cols=71 Identities=15% Similarity=0.076 Sum_probs=45.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecC--CCCHHHHHH----HHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA--SMSLERRII----LRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~--~~~~~~~~~----~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
..+||..+|--|.++|......|.++++.+.. .....+.+. ++..|.++..+..+- +.++..+...+..++
T Consensus 7 ~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~ 84 (324)
T 3u9l_A 7 IILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGE 84 (324)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence 67888888999999999999999998877654 233444433 345677776665432 233334444444443
No 316
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=48.07 E-value=55 Score=27.61 Aligned_cols=72 Identities=15% Similarity=0.092 Sum_probs=45.9
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC----------CCHHH----HHHHHHcCCEEEEeCCCC-ChhHHHHH
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS----------MSLER----RIILRAFGAELVLTDPAK-GMKGAVQK 134 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~----------~~~~~----~~~~~~~Ga~v~~~~~~~-~~~~~~~~ 134 (321)
...+||..+|--|.++|..-...|.+++++-... ....+ .+.++..|.++..+..+- +.++..+.
T Consensus 12 k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 91 (277)
T 3tsc_A 12 RVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRKV 91 (277)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 3678888888899999999999999988774321 12222 334566787777665432 33444455
Q ss_pred HHHHHHh
Q 020805 135 AEEILAK 141 (321)
Q Consensus 135 a~~~~~~ 141 (321)
..+..++
T Consensus 92 ~~~~~~~ 98 (277)
T 3tsc_A 92 VDDGVAA 98 (277)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555444
No 317
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=48.04 E-value=1.1e+02 Score=25.34 Aligned_cols=70 Identities=11% Similarity=0.026 Sum_probs=38.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
...+||..+|--|.++|..-...|.+++++-....... +..+.+|.++..+..+- +.++..+...+..++
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 78 (257)
T 3tpc_A 8 RVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGE--EPAAELGAAVRFRNADVTNEADATAALAFAKQE 78 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH--HHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 36788888899999999999999999877765443222 12233466665554332 333444444444444
No 318
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=48.04 E-value=68 Score=28.81 Aligned_cols=46 Identities=13% Similarity=0.218 Sum_probs=35.1
Q ss_pred ChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHH----HHHcCCEEEEeCC
Q 020805 79 GNTGIGLAFMAAAKQYRLIITMPASM--SLERRII----LRAFGAELVLTDP 124 (321)
Q Consensus 79 GN~g~AlA~aa~~~G~~~~ivvp~~~--~~~~~~~----~~~~Ga~v~~~~~ 124 (321)
+|.+.|++.++.++|++++++.|+.- ++.-++. .+..|+++..+..
T Consensus 163 ~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d 214 (355)
T 4a8p_A 163 TQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDD 214 (355)
T ss_dssp CHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHSCEEEEECC
T ss_pred chhHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEECC
Confidence 89999999999999999999999853 3333332 3567888887763
No 319
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=47.92 E-value=1e+02 Score=24.98 Aligned_cols=72 Identities=15% Similarity=0.100 Sum_probs=42.4
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHH-HHHHHH-cCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLER-RIILRA-FGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~-~~~~~~-~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
...+||..+|.-|.++|......|.+++++........+ .+.++. .|.++..+..+- +.++..+...+..++
T Consensus 8 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (248)
T 2pnf_A 8 KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL 82 (248)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 366888888999999999988899987777553211111 122222 576776555432 233334444444443
No 320
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=47.87 E-value=28 Score=31.72 Aligned_cols=49 Identities=14% Similarity=0.031 Sum_probs=37.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 122 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~ 122 (321)
.+|+.-..|..|..+|..++.+|.+++++ +....+.+.++.+|++.+.+
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~---D~~~~~l~~~~~lGa~~~~l 233 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGY---DVRPEVAEQVRSVGAQWLDL 233 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEE---CSSGGGHHHHHHTTCEECCC
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHHcCCeEEec
Confidence 45777788999999999999999986655 23345677778899987643
No 321
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=47.65 E-value=14 Score=28.37 Aligned_cols=97 Identities=13% Similarity=-0.010 Sum_probs=58.6
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-HcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILR-AFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQ 149 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~-~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 149 (321)
..++....|..|..+|...+..|.+++++-+.. .+.+.++ ..|..++..+..
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~---~~~~~~~~~~g~~~~~~d~~------------------------ 72 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE---YAFHRLNSEFSGFTVVGDAA------------------------ 72 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG---GGGGGSCTTCCSEEEESCTT------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH---HHHHHHHhcCCCcEEEecCC------------------------
Confidence 446666789999999999999999887775432 3333333 455554322210
Q ss_pred CCCCCcchhhhhhchHHHHHhhh-CCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEe
Q 020805 150 QFENPANPKIHYETTGPELWKGS-GGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIE 209 (321)
Q Consensus 150 ~~~~~~~~~~g~~~~~~Ei~~ql-~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~ 209 (321)
.. +.+++. -...|.||++++.-....-+....+..++..++++..
T Consensus 73 ------~~---------~~l~~~~~~~ad~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~~~ 118 (155)
T 2g1u_A 73 ------EF---------ETLKECGMEKADMVFAFTNDDSTNFFISMNARYMFNVENVIARV 118 (155)
T ss_dssp ------SH---------HHHHTTTGGGCSEEEECSSCHHHHHHHHHHHHHTSCCSEEEEEC
T ss_pred ------CH---------HHHHHcCcccCCEEEEEeCCcHHHHHHHHHHHHHCCCCeEEEEE
Confidence 00 011111 0246889999888666555556666656777777655
No 322
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=47.58 E-value=1.1e+02 Score=28.02 Aligned_cols=51 Identities=16% Similarity=0.110 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHH-cCCeEEEEecC
Q 020805 51 RIGYSMISDAEA-KGLITPGESVLIEPTSGNTGIGLAFMAAA-KQYRLIITMPA 102 (321)
Q Consensus 51 R~a~~~l~~a~~-~g~~~~g~~~vv~~SsGN~g~AlA~aa~~-~G~~~~ivvp~ 102 (321)
||+++.+..+.+ .|. ...+.+|+....||-|..+|..... +|.+++.+...
T Consensus 190 ~Gv~~~~~~~~~~~g~-~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~ 242 (415)
T 2tmg_A 190 RGVKVCAGLAMDVLGI-DPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDS 242 (415)
T ss_dssp HHHHHHHHHHHHHTTC-CTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred HHHHHHHHHHHHHcCC-CcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeC
Confidence 688888877664 454 3334678888889999998877776 77777755443
No 323
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=47.51 E-value=39 Score=30.94 Aligned_cols=45 Identities=9% Similarity=0.087 Sum_probs=35.5
Q ss_pred hHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHH----HHHcCCEEEEeCC
Q 020805 80 NTGIGLAFMAAAKQYRLIITMPASM--SLERRII----LRAFGAELVLTDP 124 (321)
Q Consensus 80 N~g~AlA~aa~~~G~~~~ivvp~~~--~~~~~~~----~~~~Ga~v~~~~~ 124 (321)
|.+.|+..++.++|++++++.|+.- ++.-++. .+..|+++..+..
T Consensus 209 nVa~Sli~~~~~lG~~v~~~~P~~~~~~~~~~~~a~~~a~~~G~~i~~~~d 259 (399)
T 3q98_A 209 SVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTS 259 (399)
T ss_dssp HHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESC
T ss_pred HHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEEcC
Confidence 7889999999999999999999953 4544433 3567999988773
No 324
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=47.43 E-value=71 Score=26.58 Aligned_cols=71 Identities=11% Similarity=0.017 Sum_probs=43.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHhC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAKT 142 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~~ 142 (321)
...+||..+|--|.++|......|.+++++-... ....+..+.++.++..+..+- +.++..+...+..++.
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVREGATVAIADIDI--ERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHA 80 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHc
Confidence 3678888889999999999889999877664322 222233344566665554332 3344445555555543
No 325
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=47.33 E-value=1.2e+02 Score=24.95 Aligned_cols=67 Identities=24% Similarity=0.131 Sum_probs=42.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHH-HHHcCCEEEEeCCCCChhHHHHHHHHHHH
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRII-LRAFGAELVLTDPAKGMKGAVQKAEEILA 140 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~-~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~ 140 (321)
...+||..+|--|.++|......|.+++++... ..+.+. .+..|.+++.++-. +.++..+...+..+
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~ 73 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEGARLVACDIE---EGPLREAAEAVGAHPVVMDVA-DPASVERGFAEALA 73 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHTTTCEEEECCTT-CHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHcCCEEEEecCC-CHHHHHHHHHHHHH
Confidence 367888888999999999988999998777543 233333 33447666666643 33333444444433
No 326
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=47.26 E-value=1.1e+02 Score=27.23 Aligned_cols=103 Identities=16% Similarity=0.075 Sum_probs=65.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 150 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 150 (321)
++|..-.-|+-|.++|..++.+|++++++=|...+. . ..+.+ .+ +. .++.++. +...++-
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~-----~-~~~~~--~~----~l-------~ell~~a-DvV~l~~ 208 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNPE-----F-EPFLT--YT----DF-------DTVLKEA-DIVSLHT 208 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCGG-----G-TTTCE--EC----CH-------HHHHHHC-SEEEECC
T ss_pred CeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhhh-----h-hcccc--cc----CH-------HHHHhcC-CEEEEcC
Confidence 567777889999999999999999988886654321 1 11222 22 11 2334444 5555544
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhH--HHHHHHHHhc
Q 020805 151 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI--TGAGKFLKEK 199 (321)
Q Consensus 151 ~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~~--aGi~~~~k~~ 199 (321)
-.++.. ...+..+.++++ +++.+++-+|.|+.+ ..+..+++..
T Consensus 209 Plt~~t----~~li~~~~l~~m--k~gailIN~aRg~~vd~~aL~~aL~~g 253 (343)
T 2yq5_A 209 PLFPST----ENMIGEKQLKEM--KKSAYLINCARGELVDTGALIKALQDG 253 (343)
T ss_dssp CCCTTT----TTCBCHHHHHHS--CTTCEEEECSCGGGBCHHHHHHHHHHT
T ss_pred CCCHHH----HHHhhHHHHhhC--CCCcEEEECCCChhhhHHHHHHHHHcC
Confidence 333322 233456778887 578999999999976 5566677653
No 327
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=47.26 E-value=71 Score=26.51 Aligned_cols=69 Identities=14% Similarity=0.036 Sum_probs=41.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI-ILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~-~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
...+||..+|--|.++|......|.+++++... ..+.+ ..+.+|.++..+..+- +.++..+..++..++
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (254)
T 1hdc_A 6 KTVIITGGARGLGAEAARQAVAAGARVVLADVL---DEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREE 76 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHH
Confidence 367888888999999999999999987776443 23333 2334465555444322 233334444444433
No 328
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=47.26 E-value=74 Score=26.51 Aligned_cols=69 Identities=7% Similarity=0.030 Sum_probs=43.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI-ILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~-~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
...+||..+|--|.++|..-...|.+++++-.. ..+.+ ..+.+|.++..+..+- +.++..+...+..++
T Consensus 9 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (255)
T 4eso_A 9 KKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRN---ESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQT 79 (255)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHH
Confidence 367888888999999999988999987776443 23333 3344566666555432 333444444444444
No 329
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=47.18 E-value=38 Score=31.21 Aligned_cols=44 Identities=14% Similarity=0.240 Sum_probs=35.3
Q ss_pred hHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHH----HHHcCCEEEEeC
Q 020805 80 NTGIGLAFMAAAKQYRLIITMPASM--SLERRII----LRAFGAELVLTD 123 (321)
Q Consensus 80 N~g~AlA~aa~~~G~~~~ivvp~~~--~~~~~~~----~~~~Ga~v~~~~ 123 (321)
|.+.+++.++.++|++++++.|+.- .+..++. ++..|+++..+.
T Consensus 206 nVa~Sli~~l~~lG~~v~l~~P~~~~~~p~~~~~a~~~a~~~G~~v~~~~ 255 (418)
T 2yfk_A 206 SVPQGIVGLMTRLGMDVVLAHPEGYEIMPEVEEVAKKNAAEFGGNFTKTN 255 (418)
T ss_dssp HHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHSSEEEEES
T ss_pred hHHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 5999999999999999999999964 4544443 456899888876
No 330
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=46.99 E-value=53 Score=26.35 Aligned_cols=50 Identities=6% Similarity=0.098 Sum_probs=37.6
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 123 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~ 123 (321)
+.+|+..+|.-|.+++......|.+++++... ..+...+...+.+++..+
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~---~~~~~~~~~~~~~~~~~D 51 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRD---PQKAADRLGATVATLVKE 51 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHTCTTSEEEECC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEec---ccccccccCCCceEEecc
Confidence 46888899999999999999999998888664 344444444566766655
No 331
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=46.95 E-value=1.2e+02 Score=28.69 Aligned_cols=123 Identities=14% Similarity=0.041 Sum_probs=70.9
Q ss_pred HHHHHHHcCCeEEE---------EecCCCCH--HHHHHHHHcCCEEEEeCCCC----ChhHHHHHHHHHHHhCCCeEE-c
Q 020805 85 LAFMAAAKQYRLII---------TMPASMSL--ERRIILRAFGAELVLTDPAK----GMKGAVQKAEEILAKTPNAYM-L 148 (321)
Q Consensus 85 lA~aa~~~G~~~~i---------vvp~~~~~--~~~~~~~~~Ga~v~~~~~~~----~~~~~~~~a~~~~~~~~~~~~-~ 148 (321)
+..+|+.+|.++++ ..|.-+-. ..+...-..|++.+.+..+. ...++.+...+.+++-+..++ -
T Consensus 283 ii~aaraaGkpvi~ATQMLeSMi~~~~ptraEvsdva~av~~G~d~vmLs~eta~G~yPveaV~~m~~I~~~aE~~~~~~ 362 (500)
T 1a3w_A 283 LIAKSNLAGKPVICATQMLESMTYNPRPTRAEVSDVGNAILDGADCVMLSGETAKGNYPINAVTTMAETAVIAEQAIAYL 362 (500)
T ss_dssp HHHHHHHHTCCEEECSSTTGGGGSCSSCCHHHHHHHHHHHHHTCSEECBSTTTTTCSCHHHHHHHHHHHHHHHTTSCCHH
T ss_pred HHHHHHhcCCCEEEEeehhhhhccCCCchHHHHHHHHHHHHhCCCEEEecchhhcchhHHHHHHHHHHHHHHhhhhhhhh
Confidence 45679999999775 33332211 23444556799999987542 123555555554444322221 0
Q ss_pred ------CC-CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEecCCC
Q 020805 149 ------QQ-FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTES 213 (321)
Q Consensus 149 ------~~-~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~~~~~ 213 (321)
.. ...+......-...+.++.++++ ..+|++..-+|.+.. .+....|.+.|+++.+...
T Consensus 363 ~~~~~~~~~~~~~~~~~~aia~aa~~~a~~~~--a~aIv~~T~sG~ta~----~isr~RP~~pI~a~t~~~~ 428 (500)
T 1a3w_A 363 PNYDDMRNCTPKPTSTTETVAASAVAAVFEQK--AKAIIVLSTSGTTPR----LVSKYRPNCPIILVTRCPR 428 (500)
T ss_dssp HHHHHHTTSCCSSCCHHHHHHHHHHHHHHHHT--CSCEEEECSSSHHHH----HHHHTCCSSCEEEEESCTT
T ss_pred hHHHhhhhccccccchHHHHHHHHHHHHHhcC--CCEEEEECCCchHHH----HHHhhCCCCCEEEEcCCHH
Confidence 00 01111112223344457777773 568999999998864 4444579999999997654
No 332
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=46.77 E-value=63 Score=27.75 Aligned_cols=70 Identities=16% Similarity=0.136 Sum_probs=46.2
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHH-HHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHHhC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLER-RIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 142 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~-~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 142 (321)
+..|||.+++--|+++|..-...|.++++.-.. ..+ .+..+.+|.++..+..+ .+.++..+...+..++.
T Consensus 30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~---~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 101 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEGARVFITGRR---KDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEA 101 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence 377888888889999999999999987766332 233 33456678776655443 23445555556665554
No 333
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=46.59 E-value=24 Score=31.05 Aligned_cols=59 Identities=12% Similarity=0.023 Sum_probs=42.3
Q ss_pred HcCCCCCCCeEEEeeCC---ChHHHHHHHHHHHc-CCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCC
Q 020805 62 AKGLITPGESVLIEPTS---GNTGIGLAFMAAAK-QYRLIITMPASM-SLERRIILRAFGAELVLTDP 124 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~Ss---GN~g~AlA~aa~~~-G~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~~~~ 124 (321)
+.|.+. | .+|+-... +|.+.|++.+++++ |++++++.|+.- ++..+ ++..|+++..+..
T Consensus 143 ~~g~l~-g-l~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~--~~~~g~~~~~~~d 206 (299)
T 1pg5_A 143 HFNTID-G-LVFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLRARKEI--LDELNYPVKEVEN 206 (299)
T ss_dssp HHSCST-T-CEEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGCCCHHH--HTTCCSCEEEESC
T ss_pred HhCCcC-C-cEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCchhcCCHHH--HHHcCCeEEEeCC
Confidence 346543 2 44554444 69999999999999 999999999864 33333 5678998877763
No 334
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=46.54 E-value=1.2e+02 Score=24.97 Aligned_cols=35 Identities=6% Similarity=-0.126 Sum_probs=26.2
Q ss_pred CCCCEEEEecCCchhHHHHHHHHHhcC----CCcEEEEEec
Q 020805 174 GRIDALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIEP 210 (321)
Q Consensus 174 ~~~d~vv~p~G~Gg~~aGi~~~~k~~~----~~~~vigv~~ 210 (321)
+.||+||+ .+..++.|+..++++.+ .++.|+|.+-
T Consensus 180 ~~~~ai~~--~~d~~a~g~~~al~~~g~~vP~di~vig~d~ 218 (276)
T 3jy6_A 180 DQKTVAFA--LKERWLLEFFPNLIISGLIDNQTVTATGFAD 218 (276)
T ss_dssp SSCEEEEE--SSHHHHHHHSHHHHHSSSCCSSSEEEEEBCC
T ss_pred CCCcEEEE--eCcHHHHHHHHHHHHcCCCCCCcEEEEEECC
Confidence 56898886 56677778899998876 2567877763
No 335
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=46.49 E-value=74 Score=28.69 Aligned_cols=61 Identities=13% Similarity=0.166 Sum_probs=42.4
Q ss_pred HcCCCCCCCeEEEeeCCC--hHHHHHHHHHHHcCCeEEEEecCCC----CHHHHH----HHHHcCCEEEEeCC
Q 020805 62 AKGLITPGESVLIEPTSG--NTGIGLAFMAAAKQYRLIITMPASM----SLERRI----ILRAFGAELVLTDP 124 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~SsG--N~g~AlA~aa~~~G~~~~ivvp~~~----~~~~~~----~~~~~Ga~v~~~~~ 124 (321)
+.|.+. | .+|+-...+ |.+.|++.+++++|++++++.|+.- ++.-++ ..+..|+++..+..
T Consensus 174 ~~G~l~-g-lkva~vGD~~nnva~Sl~~~~~~lG~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~d 244 (365)
T 4amu_A 174 KFGNLK-N-KKIVFIGDYKNNVGVSTMIGAAFNGMHVVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLRFSTD 244 (365)
T ss_dssp HHSSCT-T-CEEEEESSTTSHHHHHHHHHHHHTTCEEEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEEEESC
T ss_pred HhCCCC-C-CEEEEECCCCcchHHHHHHHHHHcCCEEEEECCccccCCCcHHHHHHHHHHHHHcCCEEEEECC
Confidence 345543 2 455555554 7899999999999999999999853 233332 24667999888773
No 336
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Probab=46.45 E-value=1.1e+02 Score=28.73 Aligned_cols=56 Identities=20% Similarity=0.208 Sum_probs=41.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC---C--CHHHHHHHHHcCCEEEEeCCC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS---M--SLERRIILRAFGAELVLTDPA 125 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~---~--~~~~~~~~~~~Ga~v~~~~~~ 125 (321)
+..+||..+|--|.++|..-...|.+.++++..+ . .....+.++..|+++..+..+
T Consensus 240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~D 300 (496)
T 3mje_A 240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACD 300 (496)
T ss_dssp SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEcc
Confidence 5778888888899999988888898655555432 1 234456788899999887654
No 337
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=46.40 E-value=55 Score=28.28 Aligned_cols=46 Identities=17% Similarity=0.077 Sum_probs=29.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAEL 119 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v 119 (321)
+++..-..|+.|.++|..++.+|.+++++-+. ..+.+.+..+|.++
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~---~~~~~~~~~~g~~~ 203 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGARS---SAHLARITEMGLVP 203 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHTTCEE
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHCCCeE
Confidence 45666677888888888888888876665432 23444445567654
No 338
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=46.39 E-value=36 Score=31.24 Aligned_cols=49 Identities=12% Similarity=0.128 Sum_probs=37.6
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 122 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~ 122 (321)
.+|+.-..|..|..+|..++.+|.+++++ +..+.+++.++.+|++.+.+
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~---D~~~~~l~~~~~~G~~~~~~ 239 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSAT---DVRPAAKEQVASLGAKFIAV 239 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEE---CSSTTHHHHHHHTTCEECCC
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEE---cCCHHHHHHHHHcCCceeec
Confidence 45777788999999999999999976655 23345677778899986544
No 339
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=46.35 E-value=77 Score=27.76 Aligned_cols=32 Identities=19% Similarity=0.223 Sum_probs=23.3
Q ss_pred eEEEeeCCChHH---HHHHHHHHHcCCeEEEEecC
Q 020805 71 SVLIEPTSGNTG---IGLAFMAAAKQYRLIITMPA 102 (321)
Q Consensus 71 ~~vv~~SsGN~g---~AlA~aa~~~G~~~~ivvp~ 102 (321)
+.+|.+..||.| .++|...+..|++++|+++.
T Consensus 134 ~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 134 TVALLCGPHVKGAQGISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCcEEEEEec
Confidence 567777888876 45555566679999998775
No 340
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=46.30 E-value=41 Score=28.93 Aligned_cols=54 Identities=11% Similarity=0.068 Sum_probs=38.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-C--CHHHHH---HHHHcCCEEEEeCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS-M--SLERRI---ILRAFGAELVLTDP 124 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~-~--~~~~~~---~~~~~Ga~v~~~~~ 124 (321)
+.+|+..+|+-|.+++......|.+++++.... . .+.+.+ .+...|.+++..+-
T Consensus 6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~ 65 (321)
T 3c1o_A 6 KIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEM 65 (321)
T ss_dssp CEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCT
T ss_pred EEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecC
Confidence 568888899999999999888899998887654 2 133333 23456777776653
No 341
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=46.27 E-value=61 Score=27.45 Aligned_cols=70 Identities=16% Similarity=0.079 Sum_probs=41.6
Q ss_pred eEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH-cC-CEEEEeCCCCChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTS--GNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRA-FG-AELVLTDPAKGMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~Ss--GN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~-~G-a~v~~~~~~~~~~~~~~~a~~~~~~ 141 (321)
..+||..+ |--|.++|......|.+++++..........+.+.. .| ..++.++-. +.++..+...+..++
T Consensus 23 ~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~-~~~~v~~~~~~~~~~ 96 (285)
T 2p91_A 23 RALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVS-LDEDIKNLKKFLEEN 96 (285)
T ss_dssp EEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTT-CHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCC-CHHHHHHHHHHHHHH
Confidence 66787776 788999999988899998777654323334444543 34 233334432 333444445555444
No 342
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=46.21 E-value=98 Score=27.36 Aligned_cols=110 Identities=13% Similarity=0.077 Sum_probs=67.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 150 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 150 (321)
++|..-..|+.|.++|..++.+|++++++-+..... .|.. ... +. .++.++. +...+.-
T Consensus 165 ~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~~--------~g~~--~~~---~l-------~ell~~a-DvVil~v 223 (333)
T 3ba1_A 165 KRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKPN--------TNYT--YYG---SV-------VELASNS-DILVVAC 223 (333)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCTT--------CCSE--EES---CH-------HHHHHTC-SEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchhc--------cCce--ecC---CH-------HHHHhcC-CEEEEec
Confidence 456667889999999999999999988776543221 1432 121 11 2233443 5555433
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhH--HHHHHHHHhcCCCcEEEEEe
Q 020805 151 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI--TGAGKFLKEKNPNIKLYGIE 209 (321)
Q Consensus 151 ~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~~--aGi~~~~k~~~~~~~vigv~ 209 (321)
-.++.. ...+..++++.+ +++.+++-++.|... ..+..++++. ..+-.+.+
T Consensus 224 P~~~~t----~~li~~~~l~~m--k~gailIn~srG~~vd~~aL~~aL~~g--~i~ga~lD 276 (333)
T 3ba1_A 224 PLTPET----THIINREVIDAL--GPKGVLINIGRGPHVDEPELVSALVEG--RLGGAGLD 276 (333)
T ss_dssp CCCGGG----TTCBCHHHHHHH--CTTCEEEECSCGGGBCHHHHHHHHHHT--SSCEEEES
T ss_pred CCChHH----HHHhhHHHHhcC--CCCCEEEECCCCchhCHHHHHHHHHcC--CCeEEEEe
Confidence 222211 223335677777 467899999999876 6777888753 34445554
No 343
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=46.18 E-value=78 Score=26.91 Aligned_cols=71 Identities=10% Similarity=0.011 Sum_probs=42.4
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHHHH-----cCCEEEEeCCCC-ChhHHHHHHHHHHH
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL-ERRIILRA-----FGAELVLTDPAK-GMKGAVQKAEEILA 140 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~-~~~~~~~~-----~Ga~v~~~~~~~-~~~~~~~~a~~~~~ 140 (321)
...+||..+|.-|.++|......|.+++++....... ...+.++. .+.++..+..+- +.++..+...+..+
T Consensus 19 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 96 (303)
T 1yxm_A 19 QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD 96 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence 3678888889999999999999999877765432111 11223333 467776665432 22333333444433
No 344
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=46.10 E-value=76 Score=26.89 Aligned_cols=69 Identities=23% Similarity=0.154 Sum_probs=44.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHH-HHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERR-IILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~-~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
...+||..+|--|.++|..-...|.+++++-.. ..+. +..+.+|.++..+..+- +.++..+...+..++
T Consensus 6 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 76 (281)
T 3zv4_A 6 EVALITGGASGLGRALVDRFVAEGARVAVLDKS---AERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAA 76 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC---HHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 367888888899999999988999987776433 2333 33455677776655432 334444555555444
No 345
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=46.10 E-value=59 Score=27.47 Aligned_cols=71 Identities=11% Similarity=0.077 Sum_probs=43.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHH-HHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL-ERRIIL-RAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~-~~~~~~-~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
..+||..+|--|.++|..-...|.+++++-...... ...+.+ ...|.++..+..+- +.++..+...+..++
T Consensus 29 ~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 102 (277)
T 4fc7_A 29 VAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKE 102 (277)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 678888888899999999888999877765432111 112222 34577777665432 333444445555444
No 346
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=45.93 E-value=70 Score=26.12 Aligned_cols=71 Identities=18% Similarity=0.168 Sum_probs=41.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCC-------eEEEEecCCCCH-HHHHHHHHcCCEEEEeCCCCC-hhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQY-------RLIITMPASMSL-ERRIILRAFGAELVLTDPAKG-MKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~-------~~~ivvp~~~~~-~~~~~~~~~Ga~v~~~~~~~~-~~~~~~~a~~~~~~ 141 (321)
..+||..+|--|.++|......|. +++++....... ...+.++..|.++..+..+-. .++..+...++.++
T Consensus 4 ~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (244)
T 2bd0_A 4 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER 83 (244)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHHHh
Confidence 568888889999999999888888 555554332111 112234445888776654432 23334444444444
No 347
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=45.90 E-value=63 Score=27.53 Aligned_cols=32 Identities=19% Similarity=0.223 Sum_probs=23.2
Q ss_pred eEEEeeCCChHH---HHHHHHHHHcCCeEEEEecC
Q 020805 71 SVLIEPTSGNTG---IGLAFMAAAKQYRLIITMPA 102 (321)
Q Consensus 71 ~~vv~~SsGN~g---~AlA~aa~~~G~~~~ivvp~ 102 (321)
+.+|.+..||.| .++|...+..|++++|+++.
T Consensus 87 ~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~ 121 (259)
T 3d3k_A 87 TVALLCGPHVKGAQGISCGRHLANHDVQVILFLPN 121 (259)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCB
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEec
Confidence 567777888876 45555566679999998765
No 348
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=45.89 E-value=1.6e+02 Score=26.06 Aligned_cols=106 Identities=17% Similarity=0.129 Sum_probs=65.9
Q ss_pred eEEEeeCCChHHHHHHHHHH-HcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcC
Q 020805 71 SVLIEPTSGNTGIGLAFMAA-AKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQ 149 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~-~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 149 (321)
++|..-..|+.|.++|..++ .+|++++++-+....... ...+|.+. +. +.+ ++.++- +...++
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~---~~~~g~~~--~~---~l~-------ell~~a-DvVil~ 227 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAET---EKALGAER--VD---SLE-------ELARRS-DCVSVS 227 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHH---HHHHTCEE--CS---SHH-------HHHHHC-SEEEEC
T ss_pred CEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhh---HhhcCcEE--eC---CHH-------HHhccC-CEEEEe
Confidence 56777788999999999999 999988777554433322 33457653 21 122 223343 555554
Q ss_pred CCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhH--HHHHHHHHh
Q 020805 150 QFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI--TGAGKFLKE 198 (321)
Q Consensus 150 ~~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~~--aGi~~~~k~ 198 (321)
-..++.. ...+..++++.+ +++.+++-+++|+.. ..+..+++.
T Consensus 228 vp~~~~t----~~li~~~~l~~m--k~gailin~srg~~vd~~aL~~aL~~ 272 (348)
T 2w2k_A 228 VPYMKLT----HHLIDEAFFAAM--KPGSRIVNTARGPVISQDALIAALKS 272 (348)
T ss_dssp CCCSGGG----TTCBCHHHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred CCCChHH----HHHhhHHHHhcC--CCCCEEEECCCCchhCHHHHHHHHHh
Confidence 3222211 223334677777 468899999999654 567777775
No 349
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=45.73 E-value=59 Score=26.50 Aligned_cols=51 Identities=25% Similarity=0.227 Sum_probs=33.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH--HHHHHHHHcCCEEEE
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL--ERRIILRAFGAELVL 121 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~--~~~~~~~~~Ga~v~~ 121 (321)
..+||..+|.-|.++|......|.+++++...+.+. ...+.++..|.++..
T Consensus 3 ~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~ 55 (245)
T 2ph3_A 3 KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVA 55 (245)
T ss_dssp EEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEE
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEE
Confidence 568888889999999999888998877764333211 112344556666544
No 350
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=45.67 E-value=55 Score=27.70 Aligned_cols=33 Identities=24% Similarity=0.261 Sum_probs=26.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 102 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~ 102 (321)
...+||..+|.-|.++|......|.+++++...
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (280)
T 1xkq_A 7 KTVIITGSSNGIGRTTAILFAQEGANVTITGRS 39 (280)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 367888888899999999988899987776543
No 351
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=45.27 E-value=48 Score=30.61 Aligned_cols=51 Identities=24% Similarity=0.127 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 020805 51 RIGYSMISDAEA-KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 102 (321)
Q Consensus 51 R~a~~~l~~a~~-~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~ 102 (321)
||..+.+..+.+ .|. ...+.+|+....||-|..+|.....+|.+++.+...
T Consensus 202 ~Gv~~~~~~~~~~~g~-~l~g~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~ 253 (424)
T 3k92_A 202 QGVTICIEEAVKKKGI-KLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGISDA 253 (424)
T ss_dssp HHHHHHHHHHHHHTTC-CGGGCEEEEECCSHHHHHHHHHHHHHTCEEEEEECS
T ss_pred HHHHHHHHHHHHHcCC-CcccCEEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 367777776654 343 333467888888999999998887777777666543
No 352
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=45.25 E-value=1.5e+02 Score=25.45 Aligned_cols=41 Identities=17% Similarity=0.129 Sum_probs=26.1
Q ss_pred HHHHhhhCCCCCEEEEecCCchhHHHHHHHHHhcC-CCcEEEEEe
Q 020805 166 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN-PNIKLYGIE 209 (321)
Q Consensus 166 ~Ei~~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~-~~~~vigv~ 209 (321)
.+++++ .++||+||+ .+.....|+..++++.+ .++.|+|.+
T Consensus 226 ~~~l~~-~~~~~ai~~--~nd~~A~g~~~al~~~g~~di~vvg~D 267 (342)
T 1jx6_A 226 KASLAK-HPDVDFIYA--CSTDVALGAVDALAELGREDIMINGWG 267 (342)
T ss_dssp HHHHHH-CCCCSEEEE--SSHHHHHHHHHHHHHHTCTTSEEBCSB
T ss_pred HHHHHh-CCCccEEEE--CCChhHHHHHHHHHHcCCCCcEEEEeC
Confidence 344443 356888886 35667778888888766 355555544
No 353
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=45.19 E-value=47 Score=27.10 Aligned_cols=70 Identities=19% Similarity=0.172 Sum_probs=42.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHH-HHHHH-HHcCCEEEEeCCCC-ChhHHHHHHHHHHH
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLE-RRIIL-RAFGAELVLTDPAK-GMKGAVQKAEEILA 140 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~-~~~~~-~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~ 140 (321)
..+||..+|.-|.++|......|.+++++........ ..+.+ +..|.++..+..+- +.++..+...+..+
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 76 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLE 76 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHH
Confidence 5688888899999999999999999766654322111 12222 35688887765432 23333444444433
No 354
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=45.17 E-value=69 Score=28.34 Aligned_cols=60 Identities=18% Similarity=0.132 Sum_probs=41.9
Q ss_pred HcCCCCCCCeEEEeeCC-ChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHH----HcCCEEEEeC
Q 020805 62 AKGLITPGESVLIEPTS-GNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILR----AFGAELVLTD 123 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~Ss-GN~g~AlA~aa~~~G~~~~ivvp~~~--~~~~~~~~~----~~Ga~v~~~~ 123 (321)
+.|.+. | .+|+-... .|.+.|++.+++++|++++++.|+.- ++..++.++ ..|+++..+.
T Consensus 149 ~~g~l~-g-l~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~ 215 (321)
T 1oth_A 149 HYSSLK-G-LTLSWIGDGNNILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTN 215 (321)
T ss_dssp HHSCCT-T-CEEEEESCSSHHHHHHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEES
T ss_pred HhCCcC-C-cEEEEECCchhhHHHHHHHHHHcCCeEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 346543 2 44554444 57899999999999999999999964 444444333 5788888776
No 355
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=45.08 E-value=63 Score=27.49 Aligned_cols=53 Identities=17% Similarity=0.272 Sum_probs=38.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHH---HHcCCEEEEeC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIIL---RAFGAELVLTD 123 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~--~~~~~~~---~~~Ga~v~~~~ 123 (321)
+.+|+..+|.-|.+++......|.+++++.....+ +.+.+.+ ...|.+++..+
T Consensus 6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D 63 (313)
T 1qyd_A 6 RVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEAS 63 (313)
T ss_dssp CEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCC
T ss_pred EEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCC
Confidence 56888889999999999988889998888766432 4444433 34576665554
No 356
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=45.07 E-value=1.5e+02 Score=25.67 Aligned_cols=156 Identities=13% Similarity=0.104 Sum_probs=80.8
Q ss_pred ceEEEEeCCCCCCCchhhHHHHHHHHHHHHc-CCCCCCCeEEEeeCCChHHHHHHH--HHHHcCCeEEEEecCCC-----
Q 020805 33 ARIAAKLEMMEPCSSVKDRIGYSMISDAEAK-GLITPGESVLIEPTSGNTGIGLAF--MAAAKQYRLIITMPASM----- 104 (321)
Q Consensus 33 ~~v~~K~E~~~ptGS~K~R~a~~~l~~a~~~-g~~~~g~~~vv~~SsGN~g~AlA~--aa~~~G~~~~ivvp~~~----- 104 (321)
.++.+.+...+|. .+...+.++.++ ++ ..|+...+.....+++- .+...++|.+.......
T Consensus 47 i~l~~~D~~~~~~------~~~~~~~~l~~~~~v-----~~iig~~~s~~~~~~~~~~~~~~~~iP~v~~~~~~~~~~~~ 115 (364)
T 3lop_A 47 IRLVARDDEQKIE------QTVRNVRDMARVDNP-----VALLTVVGTANVEALMREGVLAEARLPLVGPATGASSMTTD 115 (364)
T ss_dssp EEEEEEECTTCHH------HHHHHHHHHHHHSCE-----EEEECCCCHHHHHHHHHTTHHHHHTCCEESCSCCCGGGGSC
T ss_pred EEEEEeCCCCCHH------HHHHHHHHHHhhcCc-----EEEEecCCCHHHHhhCchhhHHhcCCcEEEcccCcHhhccC
Confidence 3455555444332 223344445543 54 55665555566677778 88999999876532110
Q ss_pred --------C-----HHHHHHHHHcCC-EEEEeCCCCCh-hHHHHHHHHHHHhCCCeE----EcCCCCCCcchhhhhhchH
Q 020805 105 --------S-----LERRIILRAFGA-ELVLTDPAKGM-KGAVQKAEEILAKTPNAY----MLQQFENPANPKIHYETTG 165 (321)
Q Consensus 105 --------~-----~~~~~~~~~~Ga-~v~~~~~~~~~-~~~~~~a~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~ 165 (321)
+ ..-.+.+..+|. +|.++..+..+ .+..+..++..++.+... ..... .. -+....
T Consensus 116 ~~~f~~~~~~~~~~~~~~~~l~~~g~~~iaii~~~~~~g~~~~~~~~~~~~~~G~~v~~~~~~~~~-~~-----d~~~~~ 189 (364)
T 3lop_A 116 PLVFPIKASYQQEIDKMITALVTIGVTRIGVLYQEDALGKEAITGVERTLKAHALAITAMASYPRN-TA-----NVGPAV 189 (364)
T ss_dssp TTEECCSCCHHHHHHHHHHHHHHTTCCCEEEEEETTHHHHHHHHHHHHHHHTTTCCCSEEEEECTT-SC-----CCHHHH
T ss_pred CcEEEeCCChHHHHHHHHHHHHHcCCceEEEEEeCchhhHHHHHHHHHHHHHcCCcEEEEEEecCC-Cc-----cHHHHH
Confidence 1 122345566775 45455433222 122333344444442111 11110 10 111122
Q ss_pred HHHHhhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEEEe
Q 020805 166 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIE 209 (321)
Q Consensus 166 ~Ei~~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vigv~ 209 (321)
.+|.+ .+||+||++ +++..+.++.+.+++.+-++++++..
T Consensus 190 ~~l~~---~~~d~v~~~-~~~~~a~~~~~~~~~~g~~~~~i~~~ 229 (364)
T 3lop_A 190 DKLLA---ADVQAIFLG-ATAEPAAQFVRQYRARGGEAQLLGLS 229 (364)
T ss_dssp HHHHH---SCCSEEEEE-SCHHHHHHHHHHHHHTTCCCEEEECT
T ss_pred HHHHh---CCCCEEEEe-cCcHHHHHHHHHHHHcCCCCeEEEec
Confidence 22222 468988875 46678889999999988888877654
No 357
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=44.98 E-value=71 Score=26.43 Aligned_cols=69 Identities=14% Similarity=0.071 Sum_probs=40.2
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCCEEEEeCCC-CChhHHHHHHHHHHHh
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI-ILRAFGAELVLTDPA-KGMKGAVQKAEEILAK 141 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~-~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 141 (321)
...+||..+|--|.++|..-...|.+++++-... .+.+ ..+.++.++..+..+ .+.++..+..++..++
T Consensus 10 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 80 (248)
T 3op4_A 10 KVALVTGASRGIGKAIAELLAERGAKVIGTATSE---SGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDE 80 (248)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSH---HHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHH
Confidence 3678888888889999999889999977764432 2222 223334333333322 2334444555555444
No 358
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=44.91 E-value=94 Score=26.26 Aligned_cols=69 Identities=13% Similarity=0.056 Sum_probs=42.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
..+||..+|--|.++|..-...|.+++++-... ....+..+.+|.++..+..+- +.++..+...+..++
T Consensus 29 ~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (277)
T 4dqx_A 29 VCIVTGGGSGIGRATAELFAKNGAYVVVADVNE--DAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAK 98 (277)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSH--HHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 678888889999999999889999877764332 222223344677666555432 333444444444443
No 359
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=44.47 E-value=62 Score=26.89 Aligned_cols=50 Identities=4% Similarity=0.051 Sum_probs=35.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA 125 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~ 125 (321)
..+||..+|--|.++|..-...|.+++++-.. .+ +..+.++.++..+..+
T Consensus 11 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~--~~---~~~~~~~~~~~~~~~D 60 (257)
T 3tl3_A 11 VAVVTGGASGLGLATTKRLLDAGAQVVVLDIR--GE---DVVADLGDRARFAAAD 60 (257)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTCEEEEEESS--CH---HHHHHTCTTEEEEECC
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCc--hH---HHHHhcCCceEEEECC
Confidence 67888888889999999988899988777552 22 2234457666665543
No 360
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=44.43 E-value=95 Score=27.34 Aligned_cols=105 Identities=21% Similarity=0.219 Sum_probs=65.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQ 149 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 149 (321)
+++|..-.-|+.|.++|..++.+|++++++-+...+.. .+ .+..... +. .++.++. +...++
T Consensus 137 gktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~------~~-~~~~~~~---~l-------~ell~~a-DvV~l~ 198 (324)
T 3evt_A 137 GQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPAD------HF-HETVAFT---AT-------ADALATA-NFIVNA 198 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCT------TC-SEEEEGG---GC-------HHHHHHC-SEEEEC
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhH------hH-hhccccC---CH-------HHHHhhC-CEEEEc
Confidence 35677778899999999999999999988866533211 11 1111111 11 2334444 555544
Q ss_pred CCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhH--HHHHHHHHh
Q 020805 150 QFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI--TGAGKFLKE 198 (321)
Q Consensus 150 ~~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~~--aGi~~~~k~ 198 (321)
--.++.. ...+..+.++.+ +++.+++-+|.|+.+ ..+..++++
T Consensus 199 lPlt~~t----~~li~~~~l~~m--k~gailIN~aRG~~vd~~aL~~aL~~ 243 (324)
T 3evt_A 199 LPLTPTT----HHLFSTELFQQT--KQQPMLINIGRGPAVDTTALMTALDH 243 (324)
T ss_dssp CCCCGGG----TTCBSHHHHHTC--CSCCEEEECSCGGGBCHHHHHHHHHT
T ss_pred CCCchHH----HHhcCHHHHhcC--CCCCEEEEcCCChhhhHHHHHHHHHh
Confidence 3222221 233456777777 578999999999976 566666664
No 361
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=44.41 E-value=60 Score=27.55 Aligned_cols=55 Identities=15% Similarity=0.161 Sum_probs=36.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-CCH-HHHHHHH-HcCCEEEEeCCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS-MSL-ERRIILR-AFGAELVLTDPA 125 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~-~~~-~~~~~~~-~~Ga~v~~~~~~ 125 (321)
..+||..+|--|.++|......|.+++++.... ... ...+.++ ..|.++..+..+
T Consensus 25 ~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~D 82 (288)
T 2x9g_A 25 AAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQAD 82 (288)
T ss_dssp EEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECC
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEee
Confidence 678888888889999998888899877765443 111 1123333 567777666543
No 362
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=44.36 E-value=46 Score=27.33 Aligned_cols=32 Identities=16% Similarity=0.167 Sum_probs=26.6
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 102 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~ 102 (321)
..+||..+|.-|.++|......|.+++++...
T Consensus 4 ~vlItGasggiG~~~a~~l~~~G~~V~~~~r~ 35 (250)
T 2cfc_A 4 VAIVTGASSGNGLAIATRFLARGDRVAALDLS 35 (250)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 56888889999999999998999887776543
No 363
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=44.27 E-value=1.3e+02 Score=24.74 Aligned_cols=25 Identities=16% Similarity=0.122 Sum_probs=15.2
Q ss_pred CCCCEEEEecCCchhHHHHHHHHHhcC
Q 020805 174 GRIDALVSGIGTGGTITGAGKFLKEKN 200 (321)
Q Consensus 174 ~~~d~vv~p~G~Gg~~aGi~~~~k~~~ 200 (321)
+.||+||+. +..++.|+..++++.+
T Consensus 176 ~~~~ai~~~--~d~~a~g~~~al~~~g 200 (277)
T 3cs3_A 176 TEPVDVFAF--NDEMAIGVYKYVAETN 200 (277)
T ss_dssp CSSEEEEES--SHHHHHHHHHHHTTSS
T ss_pred CCCcEEEEc--ChHHHHHHHHHHHHcC
Confidence 346766653 4555667777776654
No 364
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=44.14 E-value=63 Score=27.10 Aligned_cols=71 Identities=11% Similarity=0.109 Sum_probs=43.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH--HHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL--ERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~--~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
..+||..+|--|.++|......|.+++++....... ...+.++..|.++..+..+- +.++..+...+..++
T Consensus 27 ~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 100 (269)
T 3gk3_A 27 VAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLAD 100 (269)
T ss_dssp EEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 567888888888999999888999887765443221 22334555677666554432 334445555555444
No 365
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=44.12 E-value=57 Score=28.50 Aligned_cols=55 Identities=9% Similarity=-0.027 Sum_probs=34.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcC------------CeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQ------------YRLIITMPASMSLERRIILRAFGAELVLTDPA 125 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G------------~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~ 125 (321)
..++..++|..+..+|..+.... -.-.|+++...-..-...++.+|++++.++.+
T Consensus 87 ~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~ 153 (397)
T 3f9t_A 87 AYGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIK 153 (397)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBC
T ss_pred CCEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeC
Confidence 34666777777766665543221 12355555555455667788899999999854
No 366
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=44.10 E-value=60 Score=30.20 Aligned_cols=51 Identities=12% Similarity=-0.074 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 020805 51 RIGYSMISDAEA-KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 102 (321)
Q Consensus 51 R~a~~~l~~a~~-~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~ 102 (321)
||+++.+..+.+ .| ....+.+|+....||-|..+|.....+|.+++.+...
T Consensus 211 ~Gv~~~~~~~~~~~G-~~l~g~~v~VqG~GnVG~~~a~~L~~~GakvVavsD~ 262 (449)
T 1bgv_A 211 YGSVYYVEAVMKHEN-DTLVGKTVALAGFGNVAWGAAKKLAELGAKAVTLSGP 262 (449)
T ss_dssp HHHHHHHHHHHHHTT-CCSTTCEEEECCSSHHHHHHHHHHHHHTCEEEEEEET
T ss_pred HHHHHHHHHHHHHcc-CCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEeC
Confidence 688888877654 45 3333467888888999999998888889888876543
No 367
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=44.06 E-value=63 Score=27.75 Aligned_cols=71 Identities=23% Similarity=0.185 Sum_probs=41.5
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHHHHcCC---EEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL-ERRIILRAFGA---ELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~-~~~~~~~~~Ga---~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
..+||..+|.-|.++|..-...|.+++++....... ...+.++..|. ++..+..+- +.++..+...+..++
T Consensus 28 ~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 103 (297)
T 1xhl_A 28 SVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 103 (297)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence 678888889999999999888999877765432111 12234455555 555444322 233334444444333
No 368
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=43.81 E-value=45 Score=29.55 Aligned_cols=53 Identities=17% Similarity=0.176 Sum_probs=35.5
Q ss_pred HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHc
Q 020805 60 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAF 115 (321)
Q Consensus 60 a~~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~ 115 (321)
+.++..+++|...+|. .+|.-|.++...|+.+|.+.++.+. .++.|.+.++.+
T Consensus 171 ~l~~~~~~~g~~VlV~-GaG~vG~~aiqlak~~Ga~~Vi~~~--~~~~~~~~a~~l 223 (363)
T 3m6i_A 171 GLQRAGVRLGDPVLIC-GAGPIGLITMLCAKAAGACPLVITD--IDEGRLKFAKEI 223 (363)
T ss_dssp HHHHHTCCTTCCEEEE-CCSHHHHHHHHHHHHTTCCSEEEEE--SCHHHHHHHHHH
T ss_pred HHHHcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEEC--CCHHHHHHHHHh
Confidence 3445557777665665 4599999998889999987343332 245667776666
No 369
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=43.76 E-value=70 Score=30.19 Aligned_cols=50 Identities=16% Similarity=0.197 Sum_probs=34.0
Q ss_pred eEEEeeCCChHH---HHHHHHHHHcCCeEEEEecCCC-CH---HHHHHHHHcCCEEE
Q 020805 71 SVLIEPTSGNTG---IGLAFMAAAKQYRLIITMPASM-SL---ERRIILRAFGAELV 120 (321)
Q Consensus 71 ~~vv~~SsGN~g---~AlA~aa~~~G~~~~ivvp~~~-~~---~~~~~~~~~Ga~v~ 120 (321)
+.+|.+..||.| ..+|...+..|++++++++... +. ...+.++.+|.++.
T Consensus 54 ~v~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~g~~~~ 110 (502)
T 3rss_A 54 RFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFLGKKKTPDCEYNYGLYKKFGGKVV 110 (502)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEECCSSCCHHHHHHHHHHHHTTCCEE
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEECCCCCHHHHHHHHHHHhCCCcee
Confidence 667778888877 3444445556999999988643 32 34567788887765
No 370
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=43.60 E-value=75 Score=29.20 Aligned_cols=52 Identities=19% Similarity=0.127 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHH-cCCeEEEEecC
Q 020805 51 RIGYSMISDAEA-KGLITPGESVLIEPTSGNTGIGLAFMAAA-KQYRLIITMPA 102 (321)
Q Consensus 51 R~a~~~l~~a~~-~g~~~~g~~~vv~~SsGN~g~AlA~aa~~-~G~~~~ivvp~ 102 (321)
||+++.+..+.+ .|.-...+++|.....||-|+.+|..++. +|++++.+-+.
T Consensus 192 ~Gv~~~~~~~~~~~G~~~l~gktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~ 245 (419)
T 1gtm_A 192 RGASYTIREAAKVLGWDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDS 245 (419)
T ss_dssp HHHHHHHHHHHHHTTCSCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred hHHHHHHHHHHHHhCCcccCCCEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 677777776654 45320224678888899999999999999 99988877544
No 371
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=43.40 E-value=83 Score=26.59 Aligned_cols=53 Identities=21% Similarity=0.197 Sum_probs=39.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcC-CeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQ-YRLIITMPASMSLERRIILRAFGAELVLTDP 124 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G-~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~ 124 (321)
..+|+..+|+-|.+++......| .+++++....... +.+.+...|.+++..+-
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~-~~~~l~~~~~~~~~~D~ 60 (299)
T 2wm3_A 7 LVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKK-AAKELRLQGAEVVQGDQ 60 (299)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSH-HHHHHHHTTCEEEECCT
T ss_pred EEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCH-HHHHHHHCCCEEEEecC
Confidence 67888899999999999887778 8988887764433 23445567888877654
No 372
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=43.25 E-value=62 Score=28.00 Aligned_cols=53 Identities=11% Similarity=0.116 Sum_probs=33.6
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 020805 72 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA 125 (321)
Q Consensus 72 ~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~ 125 (321)
.++..++|..+..++..+- .+-.-.|+++...-..-...++.+|++++.++.+
T Consensus 70 ~i~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~ 122 (354)
T 3ly1_A 70 SILLTAGSSEGIRAAIEAY-ASLEAQLVIPELTYGDGEHFAKIAGMKVTKVKML 122 (354)
T ss_dssp GEEEESHHHHHHHHHHHHH-CCTTCEEEEESSSCTHHHHHHHHTTCEEEEECCC
T ss_pred HEEEeCChHHHHHHHHHHH-hCCCCeEEECCCCchHHHHHHHHcCCEEEEecCC
Confidence 4666777777776666553 2222234445444444567788999999999854
No 373
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=43.25 E-value=1.3e+02 Score=25.44 Aligned_cols=85 Identities=14% Similarity=0.081 Sum_probs=50.5
Q ss_pred eEEEEecCCC--CHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhchHHHHHhhh
Q 020805 95 RLIITMPASM--SLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGS 172 (321)
Q Consensus 95 ~~~ivvp~~~--~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Ei~~ql 172 (321)
|..+|.-... -..-.+.+...|++|+.++.+ .+...+.++++.+.. +.....+. |-.. ......+..++.++.
T Consensus 8 KvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~--~~~~~~~~~~i~~~g-~~~~~~~~-Dvt~-~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 8 KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELL--EDRLNQIVQELRGMG-KEVLGVKA-DVSK-KKDVEEFVRRTFETY 82 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTT-CCEEEEEC-CTTS-HHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC--HHHHHHHHHHHHhcC-CcEEEEEc-cCCC-HHHHHHHHHHHHHHc
Confidence 3444444332 233455677899999999864 344455555654443 33332232 3333 344556677888888
Q ss_pred CCCCCEEEEecCC
Q 020805 173 GGRIDALVSGIGT 185 (321)
Q Consensus 173 ~~~~d~vv~p~G~ 185 (321)
+.+|.+|-.+|.
T Consensus 83 -G~iDiLVNNAGi 94 (254)
T 4fn4_A 83 -SRIDVLCNNAGI 94 (254)
T ss_dssp -SCCCEEEECCCC
T ss_pred -CCCCEEEECCcc
Confidence 679999988883
No 374
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=43.24 E-value=89 Score=25.59 Aligned_cols=33 Identities=18% Similarity=0.204 Sum_probs=27.4
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 102 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~ 102 (321)
...+||..+|.-|.++|......|.+++++...
T Consensus 12 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~ 44 (254)
T 2wsb_A 12 ACAAVTGAGSGIGLEICRAFAASGARLILIDRE 44 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 367888899999999999998999987776543
No 375
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=43.02 E-value=88 Score=25.97 Aligned_cols=32 Identities=19% Similarity=0.224 Sum_probs=26.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 101 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp 101 (321)
...+||..+|.-|.++|......|.+++++..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 39 (260)
T 2z1n_A 8 KLAVVTAGSSGLGFASALELARNGARLLLFSR 39 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 36788888999999999998889998777654
No 376
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=42.86 E-value=64 Score=27.05 Aligned_cols=31 Identities=13% Similarity=0.293 Sum_probs=26.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 101 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp 101 (321)
..+||..+|--|.++|......|.+++++..
T Consensus 13 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 13 AAVITGGARRIGHSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 6788888888999999998889998877755
No 377
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=42.80 E-value=87 Score=27.47 Aligned_cols=113 Identities=15% Similarity=0.026 Sum_probs=69.5
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 150 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 150 (321)
++|-.-.-|+.|.++|..++.+|++++++-+..... .+.+-. .. . .-..++.++. +...++-
T Consensus 140 ~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~--------~~~~~~-~~----~----~~l~ell~~a-DiV~l~~ 201 (315)
T 3pp8_A 140 FSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSW--------PGVESY-VG----R----EELRAFLNQT-RVLINLL 201 (315)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCC--------TTCEEE-ES----H----HHHHHHHHTC-SEEEECC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhh--------hhhhhh-cc----c----CCHHHHHhhC-CEEEEec
Confidence 557777889999999999999999999886543221 122111 11 1 1223455554 5555443
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhH--HHHHHHHHhcCCCcEEEEEe
Q 020805 151 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI--TGAGKFLKEKNPNIKLYGIE 209 (321)
Q Consensus 151 ~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~~--aGi~~~~k~~~~~~~vigv~ 209 (321)
-.++.. ...+..+.++++ +++.+++-+|.|+.+ ..+..+++.. .+.-.+.+
T Consensus 202 Plt~~t----~~li~~~~l~~m--k~gailIN~aRG~~vd~~aL~~aL~~g--~i~gA~lD 254 (315)
T 3pp8_A 202 PNTAQT----VGIINSELLDQL--PDGAYVLNLARGVHVQEADLLAALDSG--KLKGAMLD 254 (315)
T ss_dssp CCCGGG----TTCBSHHHHTTS--CTTEEEEECSCGGGBCHHHHHHHHHHT--SEEEEEES
T ss_pred CCchhh----hhhccHHHHhhC--CCCCEEEECCCChhhhHHHHHHHHHhC--CccEEEcC
Confidence 222221 234556777887 578999999999987 5666677643 23444444
No 378
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=42.71 E-value=91 Score=26.35 Aligned_cols=53 Identities=19% Similarity=0.225 Sum_probs=38.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC---HHHHHH---HHHcCCEEEEeC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS---LERRII---LRAFGAELVLTD 123 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~---~~~~~~---~~~~Ga~v~~~~ 123 (321)
+.+|+..+|+-|.+++......|.+++++...... +.+.+. +...|.+++..+
T Consensus 6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D 64 (308)
T 1qyc_A 6 RILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGS 64 (308)
T ss_dssp CEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCC
T ss_pred EEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEec
Confidence 56888889999999999988899998888765432 444433 334577766554
No 379
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=42.62 E-value=26 Score=31.11 Aligned_cols=28 Identities=18% Similarity=0.029 Sum_probs=26.0
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEE
Q 020805 72 VLIEPTSGNTGIGLAFMAAAKQYRLIIT 99 (321)
Q Consensus 72 ~vv~~SsGN~g~AlA~aa~~~G~~~~iv 99 (321)
+|+...+|-.|.++|.+.++.|++++||
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEE
Confidence 4778899999999999999999999998
No 380
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=42.57 E-value=56 Score=28.65 Aligned_cols=52 Identities=10% Similarity=-0.036 Sum_probs=30.6
Q ss_pred EEEeeCCChHHHHHHHHHH-HcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 020805 72 VLIEPTSGNTGIGLAFMAA-AKQYRLIITMPASMSLERRIILRAFGAELVLTDPA 125 (321)
Q Consensus 72 ~vv~~SsGN~g~AlA~aa~-~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~ 125 (321)
.|+..++|..+..++..+- ..|= .|+++...-..-...++..|++++.++.+
T Consensus 94 ~v~~~~G~~~al~~~~~~l~~~gd--~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~ 146 (369)
T 3cq5_A 94 NLWAANGSNEILQQLLQAFGGPGR--TALGFQPSYSMHPILAKGTHTEFIAVSRG 146 (369)
T ss_dssp GEEEESHHHHHHHHHHHHHCSTTC--EEEEEESSCTHHHHHHHHTTCEEEEEECC
T ss_pred hEEECCChHHHHHHHHHHhcCCCC--EEEEcCCChHHHHHHHHHcCCEEEEecCC
Confidence 4666676667665555443 2342 33343333334456778899999988753
No 381
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=42.18 E-value=89 Score=26.26 Aligned_cols=65 Identities=14% Similarity=0.154 Sum_probs=40.4
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHH-HHHHHcCCEEEEeCCCC-ChhHHHHHHHHH
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERR-IILRAFGAELVLTDPAK-GMKGAVQKAEEI 138 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~-~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~ 138 (321)
..+||..+|--|.++|..-...|.+++++-.. ..+. +..+.++.++..+..+- +.++..+...+.
T Consensus 32 ~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 98 (281)
T 3ppi_A 32 SAIVSGGAGGLGEATVRRLHADGLGVVIADLA---AEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAA 98 (281)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCC---hHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH
Confidence 67888888889999999988899987666433 2332 23344577666655432 233334444444
No 382
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=42.12 E-value=1.3e+02 Score=23.80 Aligned_cols=50 Identities=10% Similarity=0.062 Sum_probs=37.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 124 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~ 124 (321)
+.+|+..+|.-|.+++......|.+++++.... .+...+. -+.+++..+-
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~---~~~~~~~-~~~~~~~~D~ 51 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA---GKITQTH-KDINILQKDI 51 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS---HHHHHHC-SSSEEEECCG
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc---hhhhhcc-CCCeEEeccc
Confidence 457888899999999999999999998887653 3333333 5667666653
No 383
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=41.96 E-value=77 Score=29.52 Aligned_cols=52 Identities=10% Similarity=-0.156 Sum_probs=36.8
Q ss_pred hHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 020805 50 DRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 101 (321)
Q Consensus 50 ~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp 101 (321)
-||..+.+..+.+.--....+.+|+....||-|..+|.....+|.+++.+..
T Consensus 219 g~Gv~~~~~~~~~~~g~~l~g~~VaVQG~GnVG~~aa~~L~e~GakvVavsD 270 (456)
T 3r3j_A 219 GYGVVYFAENVLKDLNDNLENKKCLVSGSGNVAQYLVEKLIEKGAIVLTMSD 270 (456)
T ss_dssp HHHHHHHHHHHHHTTTCCSTTCCEEEECCSHHHHHHHHHHHHHTCCBCCEEC
T ss_pred chHHHHHHHHHHHHcCCCccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 4577778877765422333346788888899999999888888877765543
No 384
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=41.83 E-value=1.2e+02 Score=25.68 Aligned_cols=54 Identities=13% Similarity=0.164 Sum_probs=37.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA 125 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~ 125 (321)
...+||..+|--|.++|......|.+++++.... ....+..+.++.++..+..+
T Consensus 17 k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D 70 (291)
T 3rd5_A 17 RTVVITGANSGLGAVTARELARRGATVIMAVRDT--RKGEAAARTMAGQVEVRELD 70 (291)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCH--HHHHHHHTTSSSEEEEEECC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCH--HHHHHHHHHhcCCeeEEEcC
Confidence 3678888889999999999889999877765432 22223345567788776654
No 385
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=41.57 E-value=54 Score=27.27 Aligned_cols=71 Identities=14% Similarity=0.157 Sum_probs=43.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH--HHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL--ERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~--~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
..+||..+|--|.++|..-...|.+++++....... ...+.++..|.++..+..+- +.++..+...+..++
T Consensus 9 ~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 82 (264)
T 3i4f_A 9 HALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSH 82 (264)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 567888888888999988888999888775544221 12233344566666555432 333444445555444
No 386
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=41.17 E-value=26 Score=30.88 Aligned_cols=28 Identities=18% Similarity=0.141 Sum_probs=25.7
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 020805 73 LIEPTSGNTGIGLAFMAAAKQYRLIITM 100 (321)
Q Consensus 73 vv~~SsGN~g~AlA~aa~~~G~~~~ivv 100 (321)
|+...+|-.|.++|+..++.|++++|+=
T Consensus 7 ViIVGaGpaGl~~A~~La~~G~~V~v~E 34 (397)
T 3oz2_A 7 VLVVGGGPGGSTAARYAAKYGLKTLMIE 34 (397)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEECcCHHHHHHHHHHHHCCCcEEEEe
Confidence 6778999999999999999999999884
No 387
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=41.14 E-value=1.3e+02 Score=24.97 Aligned_cols=69 Identities=14% Similarity=0.076 Sum_probs=41.4
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI-ILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~-~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
+..+||..+|--|.++|......|.+++++... ..+.+ ..+.++.++..+..+- +.++..+...+..++
T Consensus 7 k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 77 (263)
T 2a4k_A 7 KTILVTGAASGIGRAALDLFAREGASLVAVDRE---ERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEE 77 (263)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 367888888999999999988999987776443 23333 2344444555444322 233344444444433
No 388
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=41.13 E-value=1.4e+02 Score=24.18 Aligned_cols=48 Identities=15% Similarity=0.155 Sum_probs=31.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 123 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~ 123 (321)
..++....|..|..+|......|. ++++ ..+ +.+.+.++ .|.+++..+
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~vi-d~~--~~~~~~~~-~~~~~i~gd 57 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FVLA-EDE--NVRKKVLR-SGANFVHGD 57 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EEEE-SCG--GGHHHHHH-TTCEEEESC
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EEEE-ECC--HHHHHHHh-cCCeEEEcC
Confidence 346667789999999988877787 4444 332 33445555 676665444
No 389
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=40.77 E-value=83 Score=27.31 Aligned_cols=52 Identities=13% Similarity=0.052 Sum_probs=33.7
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 020805 72 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 124 (321)
Q Consensus 72 ~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~ 124 (321)
.++..++|..+..++..+- .+-.-.|+++...-..-...++..|++++.++.
T Consensus 84 ~v~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~ 135 (365)
T 3get_A 84 NIIIGAGSDQVIEFAIHSK-LNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQS 135 (365)
T ss_dssp GEEEESSHHHHHHHHHHHH-CCTTCEEEECSSCCTHHHHHHHHHTCEEEECSS
T ss_pred eEEECCCHHHHHHHHHHHH-hCCCCEEEEeCCChHHHHHHHHHcCCEEEEEec
Confidence 4676777777776665543 222234555554444556678889999999985
No 390
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=40.69 E-value=53 Score=26.77 Aligned_cols=32 Identities=22% Similarity=0.330 Sum_probs=26.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcC--CeEEEEecC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQ--YRLIITMPA 102 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G--~~~~ivvp~ 102 (321)
..+|+..+|.-|.++|......| .+++++...
T Consensus 5 ~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~ 38 (250)
T 1yo6_A 5 SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARD 38 (250)
T ss_dssp EEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESS
T ss_pred EEEEecCCchHHHHHHHHHHhcCCCcEEEEEecC
Confidence 67888888999999999988889 887777654
No 391
>3gbc_A Pyrazinamidase/nicotinamidas PNCA; nicotinamidase - pyrazinamidase, resistance to pyrazinamide, hydrolase; 2.20A {Mycobacterium tuberculosis} PDB: 3pl1_A
Probab=40.69 E-value=1e+02 Score=24.52 Aligned_cols=58 Identities=16% Similarity=0.054 Sum_probs=40.1
Q ss_pred HHHHcCCCCCCCeEEEeeCCChHH-HHHHHHHHHcCCeEEEEecCC--CCH----HHHHHHHHcCCEEE
Q 020805 59 DAEAKGLITPGESVLIEPTSGNTG-IGLAFMAAAKQYRLIITMPAS--MSL----ERRIILRAFGAELV 120 (321)
Q Consensus 59 ~a~~~g~~~~g~~~vv~~SsGN~g-~AlA~aa~~~G~~~~ivvp~~--~~~----~~~~~~~~~Ga~v~ 120 (321)
..+++|. ...+++.-..+.+ .+.|.-|..+|++++|+.... .++ .-++.|+..|++++
T Consensus 119 ~L~~~gi----~~lvv~G~~t~~CV~~Ta~da~~~G~~v~v~~Da~~~~~~~~~~~al~~m~~~G~~i~ 183 (186)
T 3gbc_A 119 WLRQRGV----DEVDVVGIATDHCVRQTAEDAVRNGLATRVLVDLTAGVSADTTVAALEEMRTASVELV 183 (186)
T ss_dssp HHHHTTC----CEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHhcCC----CEEEEEEecccHHHHHHHHHHHHCCCeEEEEhhhcCCCCHHHHHHHHHHHHHcCCEEe
Confidence 3344565 2556666667877 677888999999999886642 222 24678888999875
No 392
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=40.66 E-value=1.6e+02 Score=24.59 Aligned_cols=43 Identities=12% Similarity=0.178 Sum_probs=30.5
Q ss_pred hHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHHhcC-----CCcEEEEEe
Q 020805 164 TGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN-----PNIKLYGIE 209 (321)
Q Consensus 164 ~~~Ei~~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~-----~~~~vigv~ 209 (321)
...+++++- +++|+||+. +...+.|+..++++.+ .++.|+|.+
T Consensus 178 ~~~~~l~~~-~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~~dv~vig~D 225 (297)
T 3rot_A 178 RVKSYFKIH-PETNIIFCL--TSQALDPLGQMLLHPDRYDFNYQPQVYSFD 225 (297)
T ss_dssp HHHHHHHHC-TTCCEEEES--SHHHHHHHHHHHHSHHHHTCCCCCEEEEEC
T ss_pred HHHHHHHhC-CCCCEEEEc--CCcchHHHHHHHHhcCCccCCCceEEEEeC
Confidence 334555543 578998874 4677789999998875 368888886
No 393
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=40.26 E-value=95 Score=25.35 Aligned_cols=49 Identities=27% Similarity=0.289 Sum_probs=34.5
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 124 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~ 124 (321)
..+||..+|.-|.++|......|.+++++.... .. ..+.+|...+.++-
T Consensus 4 ~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~--~~---~~~~~~~~~~~~D~ 52 (239)
T 2ekp_A 4 KALVTGGSRGIGRAIAEALVARGYRVAIASRNP--EE---AAQSLGAVPLPTDL 52 (239)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC--HH---HHHHHTCEEEECCT
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH--HH---HHHhhCcEEEecCC
Confidence 678888999999999999989999877765443 21 12233666666554
No 394
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=40.16 E-value=89 Score=23.56 Aligned_cols=49 Identities=22% Similarity=0.265 Sum_probs=30.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAEL 119 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v 119 (321)
+.++.+........+...|...|++.+++.+......-.+..+..|.++
T Consensus 71 Dlvii~vp~~~v~~v~~~~~~~g~~~i~~~~~~~~~~l~~~a~~~Gi~~ 119 (138)
T 1y81_A 71 DVIVFVVPPKVGLQVAKEAVEAGFKKLWFQPGAESEEIRRFLEKAGVEY 119 (138)
T ss_dssp CEEEECSCHHHHHHHHHHHHHTTCCEEEECTTSCCHHHHHHHHHHTCEE
T ss_pred CEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCccHHHHHHHHHHHCCCEE
Confidence 4455555555556666556667888777777665656566666666654
No 395
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=40.09 E-value=37 Score=25.01 Aligned_cols=44 Identities=7% Similarity=-0.040 Sum_probs=28.9
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE
Q 020805 73 LIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAEL 119 (321)
Q Consensus 73 vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v 119 (321)
++....|..|..+|......|.+++++-+ .+.+.+.++..|.++
T Consensus 9 v~I~G~G~iG~~~a~~l~~~g~~v~~~d~---~~~~~~~~~~~~~~~ 52 (144)
T 2hmt_A 9 FAVIGLGRFGGSIVKELHRMGHEVLAVDI---NEEKVNAYASYATHA 52 (144)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCCEEEES---CHHHHHTTTTTCSEE
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHhCCEE
Confidence 44445699999999999999988777643 234444444444433
No 396
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=40.02 E-value=1.4e+02 Score=24.42 Aligned_cols=68 Identities=9% Similarity=-0.026 Sum_probs=40.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 141 (321)
..+||..+|--|.++|..-...|.+++++-. ...+.+.+.....++..+..+ .+.++..+...+..++
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r---~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 72 (247)
T 3dii_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDI---DEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEK 72 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHhcccCCeEEeeCCCHHHHHHHHHHHHHH
Confidence 6688888899999999998899998777643 334444444333333333322 2334444444554443
No 397
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=39.82 E-value=38 Score=29.15 Aligned_cols=33 Identities=27% Similarity=0.275 Sum_probs=23.6
Q ss_pred eEEEeeCCChHH---HHHHHHHHHcCCeEEEEecCC
Q 020805 71 SVLIEPTSGNTG---IGLAFMAAAKQYRLIITMPAS 103 (321)
Q Consensus 71 ~~vv~~SsGN~g---~AlA~aa~~~G~~~~ivvp~~ 103 (321)
+.+|.+..||.| ..+|...+..|++++|+++..
T Consensus 81 ~VlVlcG~GNNGGDGlv~AR~L~~~G~~V~V~~~~~ 116 (265)
T 2o8n_A 81 TVLVICGPGNNGGDGLVCARHLKLFGYQPTIYYPKR 116 (265)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCSC
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCcEEEEEeCC
Confidence 567777888876 455555666799999988753
No 398
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=39.79 E-value=27 Score=30.92 Aligned_cols=26 Identities=27% Similarity=0.267 Sum_probs=23.3
Q ss_pred CCChHHHHHHHHHHHcCCeEEEEecC
Q 020805 77 TSGNTGIGLAFMAAAKQYRLIITMPA 102 (321)
Q Consensus 77 SsGN~g~AlA~aa~~~G~~~~ivvp~ 102 (321)
|||..|.++|-++...|..++++...
T Consensus 63 SSGkmG~aiAe~~~~~Ga~V~lv~g~ 88 (313)
T 1p9o_A 63 SSGRRGATSAEAFLAAGYGVLFLYRA 88 (313)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEecC
Confidence 56889999999999999999988754
No 399
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=39.57 E-value=1.3e+02 Score=26.11 Aligned_cols=47 Identities=11% Similarity=0.069 Sum_probs=29.5
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 020805 72 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 123 (321)
Q Consensus 72 ~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~ 123 (321)
+++....|..|..+|......|. ++++ ..+ +.+.+ ++..|..++.-+
T Consensus 117 ~viI~G~G~~g~~l~~~L~~~g~-v~vi-d~~--~~~~~-~~~~~~~~i~gd 163 (336)
T 1lnq_A 117 HVVICGWSESTLECLRELRGSEV-FVLA-EDE--NVRKK-VLRSGANFVHGD 163 (336)
T ss_dssp EEEEESCCHHHHHHHTTGGGSCE-EEEE-SCG--GGHHH-HHHTTCEEEESC
T ss_pred CEEEECCcHHHHHHHHHHHhCCc-EEEE-eCC--hhhhh-HHhCCcEEEEeC
Confidence 57777889999998887777776 4333 322 33444 555666554444
No 400
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=39.49 E-value=91 Score=26.90 Aligned_cols=33 Identities=18% Similarity=0.186 Sum_probs=27.9
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 102 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~ 102 (321)
++.+|+..+|.-|.+++......|.+++++...
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~ 35 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNF 35 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecC
Confidence 367888899999999999988889998887643
No 401
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=39.43 E-value=1.7e+02 Score=24.41 Aligned_cols=36 Identities=19% Similarity=0.228 Sum_probs=27.7
Q ss_pred CCCCEEEEecCCchhHHHHHHHHHhcC----CCcEEEEEecC
Q 020805 174 GRIDALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIEPT 211 (321)
Q Consensus 174 ~~~d~vv~p~G~Gg~~aGi~~~~k~~~----~~~~vigv~~~ 211 (321)
++||+||+. +..++.|+..++++.+ .++.|+|.+..
T Consensus 184 ~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~di~vig~D~~ 223 (289)
T 3k9c_A 184 TPPTAVVAF--NDRCATGVLDLLVRSGRDVPADISVVGYDDS 223 (289)
T ss_dssp SCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEEECC
T ss_pred CCCCEEEEC--ChHHHHHHHHHHHHcCCCCCCceEEEEECCH
Confidence 568998875 5667789999999876 35789888744
No 402
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=39.05 E-value=78 Score=27.57 Aligned_cols=52 Identities=17% Similarity=0.185 Sum_probs=32.1
Q ss_pred eEEEeeCCChHHHHHHHHHHH----cCCeEEEEecCC-C-CHHHHHHHHHcCCEEEEeCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAA----KQYRLIITMPAS-M-SLERRIILRAFGAELVLTDP 124 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~----~G~~~~ivvp~~-~-~~~~~~~~~~~Ga~v~~~~~ 124 (321)
..++..++|..+..++..+-. -|= .|++++. . .......++..|++++.++.
T Consensus 60 ~~v~~~~g~t~al~~~~~~~~~~~~~gd--~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~ 117 (385)
T 2bkw_A 60 QPFVLAGSGTLGWDIFASNFILSKAPNK--NVLVVSTGTFSDRFADCLRSYGAQVDVVRP 117 (385)
T ss_dssp EEEEEESCTTHHHHHHHHHHSCTTCSCC--EEEEECSSHHHHHHHHHHHHTTCEEEEECC
T ss_pred ceEEEcCchHHHHHHHHHHHhccCCCCC--eEEEEcCCcchHHHHHHHHHcCCceEEEec
Confidence 457777888888777766543 332 3333322 2 22223567889999999875
No 403
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=39.05 E-value=1.7e+02 Score=24.55 Aligned_cols=43 Identities=21% Similarity=0.302 Sum_probs=27.4
Q ss_pred HHHHHhhhCCCCCEEEEecCCchhHHHHHHHHHhcCC--CcEEEEEe
Q 020805 165 GPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNP--NIKLYGIE 209 (321)
Q Consensus 165 ~~Ei~~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~--~~~vigv~ 209 (321)
..+++++-+++||+||+. +.....|+..++++.+- ++.|+|.+
T Consensus 178 ~~~~l~~~~~~~~ai~~~--~d~~a~g~~~al~~~G~~~di~vig~d 222 (313)
T 3m9w_A 178 MENALTANNNKIDAVVAS--NDATAGGAIQALSAQGLSGKVAISGQD 222 (313)
T ss_dssp HHHHHHHTTTCCCEEEES--SHHHHHHHHHHHHTTTCTTTSEECCCS
T ss_pred HHHHHHhCCCCeeEEEEC--CCchHHHHHHHHHHcCCCCCcEEEecC
Confidence 344554432578988875 55667788888887764 35555544
No 404
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=38.78 E-value=53 Score=24.61 Aligned_cols=25 Identities=16% Similarity=0.154 Sum_probs=19.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCe
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYR 95 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~ 95 (321)
+++....+|+.|.++|......|.+
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~ 46 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYK 46 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCE
Confidence 3466566799999999887778888
No 405
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=38.64 E-value=92 Score=23.61 Aligned_cols=50 Identities=12% Similarity=-0.045 Sum_probs=32.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 120 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~ 120 (321)
+.++.+........++-.|...|++.+++.+......-.+.++..|.+++
T Consensus 79 Dlvvi~vp~~~~~~vv~~~~~~gi~~i~~~~g~~~~~l~~~a~~~Gi~vv 128 (144)
T 2d59_A 79 EVVDLFVKPKLTMEYVEQAIKKGAKVVWFQYNTYNREASKKADEAGLIIV 128 (144)
T ss_dssp SEEEECSCHHHHHHHHHHHHHHTCSEEEECTTCCCHHHHHHHHHTTCEEE
T ss_pred CEEEEEeCHHHHHHHHHHHHHcCCCEEEECCCchHHHHHHHHHHcCCEEE
Confidence 44555555566666666677778887776665555666666777776643
No 406
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=38.62 E-value=48 Score=27.49 Aligned_cols=33 Identities=9% Similarity=0.045 Sum_probs=27.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 102 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~ 102 (321)
...+||..+|.-|.++|......|.+++++...
T Consensus 8 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~ 40 (264)
T 2pd6_A 8 ALALVTGAGSGIGRAVSVRLAGEGATVAACDLD 40 (264)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 367888888999999999988999987776543
No 407
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=38.54 E-value=1.7e+02 Score=24.78 Aligned_cols=87 Identities=18% Similarity=0.154 Sum_probs=52.0
Q ss_pred CeEEEEecCC----CCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhchHHHHH
Q 020805 94 YRLIITMPAS----MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELW 169 (321)
Q Consensus 94 ~~~~ivvp~~----~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Ei~ 169 (321)
=+.++|.-.. .-..-.+.+...|++|+.+..+ +...+...++.++.+...++ +. |... ......+..++.
T Consensus 31 gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~-~~-Dv~d-~~~v~~~~~~~~ 104 (293)
T 3grk_A 31 GKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQG---DALKKRVEPLAEELGAFVAG-HC-DVAD-AASIDAVFETLE 104 (293)
T ss_dssp TCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECS---HHHHHHHHHHHHHHTCEEEE-EC-CTTC-HHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCC---HHHHHHHHHHHHhcCCceEE-EC-CCCC-HHHHHHHHHHHH
Confidence 3566666644 3345567778889999988753 23344445555444333332 22 2223 234455666777
Q ss_pred hhhCCCCCEEEEecCCch
Q 020805 170 KGSGGRIDALVSGIGTGG 187 (321)
Q Consensus 170 ~ql~~~~d~vv~p~G~Gg 187 (321)
++. +.+|.+|..+|...
T Consensus 105 ~~~-g~iD~lVnnAG~~~ 121 (293)
T 3grk_A 105 KKW-GKLDFLVHAIGFSD 121 (293)
T ss_dssp HHT-SCCSEEEECCCCCC
T ss_pred Hhc-CCCCEEEECCccCC
Confidence 776 57999999998653
No 408
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=38.53 E-value=42 Score=29.72 Aligned_cols=32 Identities=6% Similarity=0.143 Sum_probs=26.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 102 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~ 102 (321)
++|..-.+|-.|..++.+|+++|++++++-+.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~ 33 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKN 33 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45666778899999999999999999988653
No 409
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=38.34 E-value=90 Score=26.32 Aligned_cols=68 Identities=10% Similarity=0.104 Sum_probs=40.4
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHH-HHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERR-IILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~-~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
..+||..+|--|.++|..-...|.+++++-.. ..+. +..+.++.++..+..+- +.++..+...+..++
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 99 (272)
T 4dyv_A 30 IAIVTGAGSGVGRAVAVALAGAGYGVALAGRR---LDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEK 99 (272)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence 66888888888999999988899987766433 2222 23344555555444332 233444444444444
No 410
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=38.31 E-value=1.1e+02 Score=25.92 Aligned_cols=69 Identities=7% Similarity=0.053 Sum_probs=41.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
..+||..+|--|.++|......|.+++++-... ....+..+.+|.++..+..+- +.++..+...+..++
T Consensus 31 ~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 100 (277)
T 3gvc_A 31 VAIVTGAGAGIGLAVARRLADEGCHVLCADIDG--DAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAA 100 (277)
T ss_dssp EEEETTTTSTHHHHHHHHHHHTTCEEEEEESSH--HHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHH
Confidence 678888888899999999889999877764332 122223344465555544332 333444444444443
No 411
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=38.23 E-value=86 Score=26.77 Aligned_cols=45 Identities=20% Similarity=0.061 Sum_probs=35.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCE
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAE 118 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~ 118 (321)
.+|..-..|+.|.++|......|.+++++ +..+.+.+.+...|..
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~---d~~~~~~~~~~~~g~~ 48 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVF---DLVQSAVDGLVAAGAS 48 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEE---CSSHHHHHHHHHTTCE
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEE---cCCHHHHHHHHHCCCe
Confidence 34666688999999999999999988877 3456677777777754
No 412
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=38.07 E-value=1.6e+02 Score=23.95 Aligned_cols=147 Identities=14% Similarity=0.071 Sum_probs=73.3
Q ss_pred HHHHHHHHHcC-CCCCCCeEEEeeCC-ChHHHHHHHHHHHcCCeEEEEecCC-----C-----CH-----HHHHHHHHc-
Q 020805 54 YSMISDAEAKG-LITPGESVLIEPTS-GNTGIGLAFMAAAKQYRLIITMPAS-----M-----SL-----ERRIILRAF- 115 (321)
Q Consensus 54 ~~~l~~a~~~g-~~~~g~~~vv~~Ss-GN~g~AlA~aa~~~G~~~~ivvp~~-----~-----~~-----~~~~~~~~~- 115 (321)
...+..+.+++ . +.++.... ..........+...|+|++.+-... . .. .-.+.+...
T Consensus 48 ~~~i~~l~~~~~v-----dgii~~~~~~~~~~~~~~~~~~~~ipvV~~~~~~~~~~~~~~V~~d~~~~g~~~~~~l~~~~ 122 (276)
T 3ksm_A 48 IQILSYHLSQAPP-----DALILAPNSAEDLTPSVAQYRARNIPVLVVDSDLAGDAHQGLVATDNYAAGQLAARALLATL 122 (276)
T ss_dssp HHHHHHHHHHSCC-----SEEEECCSSTTTTHHHHHHHHHTTCCEEEESSCCSSSCSSEEEECCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhCCC-----CEEEEeCCCHHHHHHHHHHHHHCCCcEEEEecCCCCCCcceEEccCHHHHHHHHHHHHHHhc
Confidence 34555556666 5 45565542 2223344445667788888773221 0 11 112233333
Q ss_pred ---CC-EEEEeCCCCCh---hHHHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchh
Q 020805 116 ---GA-ELVLTDPAKGM---KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGT 188 (321)
Q Consensus 116 ---Ga-~v~~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~ 188 (321)
|. +|.++.+..+. .++.+-.++..++.++.-+............++. ...+++++- ++||+||+. +..+
T Consensus 123 ~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~-~~~~ai~~~--~d~~ 198 (276)
T 3ksm_A 123 DLSKERNIALLRLRAGNASTDQREQGFLDVLRKHDKIRIIAAPYAGDDRGAARS-EMLRLLKET-PTIDGLFTP--NEST 198 (276)
T ss_dssp CTTSCEEEEECBCCTTCHHHHHHHHHHHHHHTTCTTEEEEECCBCCSSHHHHHH-HHHHHHHHC-SCCCEEECC--SHHH
T ss_pred CcCCCceEEEEEcCCCchhHHHHHHHHHHHHHhCCCcEEEEEecCCCcHHHHHH-HHHHHHHhC-CCceEEEEC--Cchh
Confidence 43 45555543221 1233333444444434332211111122122332 334555543 578988865 5677
Q ss_pred HHHHHHHHHhcC--CCcEEEEEe
Q 020805 189 ITGAGKFLKEKN--PNIKLYGIE 209 (321)
Q Consensus 189 ~aGi~~~~k~~~--~~~~vigv~ 209 (321)
..|+..++++.+ .++.|+|.+
T Consensus 199 a~g~~~al~~~g~p~di~vig~d 221 (276)
T 3ksm_A 199 TIGALVAIRQSGMSKQFGFIGFD 221 (276)
T ss_dssp HHHHHHHHHHTTCTTSSEEEEES
T ss_pred hhHHHHHHHHcCCCCCeEEEEeC
Confidence 789999999876 357787776
No 413
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=37.95 E-value=1.1e+02 Score=22.04 Aligned_cols=46 Identities=15% Similarity=0.092 Sum_probs=30.3
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-HcCCEEE
Q 020805 72 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILR-AFGAELV 120 (321)
Q Consensus 72 ~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~-~~Ga~v~ 120 (321)
.++....|+.|..+|......|.+++++-+ .+.+.+.++ .+|.+++
T Consensus 6 ~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~---~~~~~~~~~~~~~~~~~ 52 (140)
T 1lss_A 6 YIIIAGIGRVGYTLAKSLSEKGHDIVLIDI---DKDICKKASAEIDALVI 52 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHCSSEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEEC---CHHHHHHHHHhcCcEEE
Confidence 355557799999999998888988777643 234444443 2455443
No 414
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=37.93 E-value=99 Score=25.91 Aligned_cols=69 Identities=19% Similarity=0.097 Sum_probs=42.4
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
..+||..+|--|.++|......|.+++++....... .+..+.++.++..+..+- +.++..+...+..++
T Consensus 7 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 76 (281)
T 3m1a_A 7 VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEAL--DDLVAAYPDRAEAISLDVTDGERIDVVAADVLAR 76 (281)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGG--HHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHh
Confidence 678888888999999999889999887776543222 223345666665554332 233334444444433
No 415
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=37.85 E-value=97 Score=25.63 Aligned_cols=70 Identities=16% Similarity=0.116 Sum_probs=39.4
Q ss_pred eEEEeeCCChHHHHHHHHHHH---cCCeEEEEecCCCC-HHHHHHHHHc--CCEEEEeCCCCC-hhHHHHHHHHHHH
Q 020805 71 SVLIEPTSGNTGIGLAFMAAA---KQYRLIITMPASMS-LERRIILRAF--GAELVLTDPAKG-MKGAVQKAEEILA 140 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~---~G~~~~ivvp~~~~-~~~~~~~~~~--Ga~v~~~~~~~~-~~~~~~~a~~~~~ 140 (321)
..+||..+|--|.++|..-.. .|.+++++-..... ....+.++.. |.++..+..+-. .++..+...+..+
T Consensus 8 ~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (259)
T 1oaa_A 8 VCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE 84 (259)
T ss_dssp EEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence 567777778888888888776 79887776443211 1112233332 777776654322 3334444444444
No 416
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=37.79 E-value=1.1e+02 Score=25.57 Aligned_cols=33 Identities=15% Similarity=0.052 Sum_probs=28.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS 103 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~ 103 (321)
..+||..+|.-|.++|......|.+++++....
T Consensus 10 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 42 (264)
T 2dtx_A 10 VVIVTGASMGIGRAIAERFVDEGSKVIDLSIHD 42 (264)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCc
Confidence 678899999999999999999999888776543
No 417
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=37.76 E-value=92 Score=27.08 Aligned_cols=46 Identities=22% Similarity=0.260 Sum_probs=35.5
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAEL 119 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v 119 (321)
.+|..-..|+.|.++|......|.+++++ +..+.+.+.+...|+++
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~---dr~~~~~~~l~~~g~~~ 77 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVW---NRTPARAASLAALGATI 77 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEE---CSCHHHHHHHHTTTCEE
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEE---cCCHHHHHHHHHCCCEe
Confidence 45666788999999999999999998877 44566777776666543
No 418
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=37.40 E-value=2.2e+02 Score=27.28 Aligned_cols=69 Identities=16% Similarity=0.118 Sum_probs=45.2
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCCh-hHHHHHHHHHHHh
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGM-KGAVQKAEEILAK 141 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~-~~~~~~a~~~~~~ 141 (321)
...|||..++--|+++|....+.|.++++.- ........+.++..|.+++.+.. +. .+..+...+..++
T Consensus 323 kvalVTGas~GIG~a~A~~la~~Ga~Vv~~~-~~~~~~~~~~i~~~g~~~~~~~~--Dv~~~~~~~~~~~~~~ 392 (604)
T 2et6_A 323 KVVLITGAGAGLGKEYAKWFAKYGAKVVVND-FKDATKTVDEIKAAGGEAWPDQH--DVAKDSEAIIKNVIDK 392 (604)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEC-SSCCHHHHHHHHHTTCEEEEECC--CHHHHHHHHHHHHHHH
T ss_pred CeEEEECcchHHHHHHHHHHHHCCCEEEEEe-CccHHHHHHHHHhcCCeEEEEEc--ChHHHHHHHHHHHHHh
Confidence 3567777777788888888889999876652 23345556677778988887764 33 3444444444443
No 419
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=37.35 E-value=1.3e+02 Score=25.03 Aligned_cols=72 Identities=11% Similarity=0.006 Sum_probs=41.4
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHH-cCC-EEEEeCCC-CChhHHHHHHHHHHHh
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRA-FGA-ELVLTDPA-KGMKGAVQKAEEILAK 141 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-~~~~~~~~~-~Ga-~v~~~~~~-~~~~~~~~~a~~~~~~ 141 (321)
...+||..+|--|.++|..-...|.+++++-..... ....+.++. ++. ++..+..+ .+.++..+...+..++
T Consensus 9 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (265)
T 3lf2_A 9 AVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERT 84 (265)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 367888888889999999988999987666443211 112223333 444 35554432 2334444445555444
No 420
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=37.11 E-value=82 Score=26.35 Aligned_cols=70 Identities=13% Similarity=0.058 Sum_probs=39.7
Q ss_pred eEEEeeC--CChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 020805 71 SVLIEPT--SGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~S--sGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 141 (321)
..+||.. +|.-|.++|......|.+++++-... .....+..+.++.++..+..+- +.++..+...+..++
T Consensus 9 ~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (269)
T 2h7i_A 9 RILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDR-LRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEA 81 (269)
T ss_dssp EEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSC-HHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCh-HHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHH
Confidence 5677776 78889999999888999876664432 1111223344555554443322 333444444555444
No 421
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=36.73 E-value=62 Score=29.55 Aligned_cols=38 Identities=29% Similarity=0.406 Sum_probs=30.3
Q ss_pred CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC
Q 020805 66 ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM 104 (321)
Q Consensus 66 ~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~ 104 (321)
+-|+ ++|....+|..|+.++.+|+++|++++++-|...
T Consensus 32 ~~~~-~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~ 69 (419)
T 4e4t_A 32 ILPG-AWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPA 69 (419)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTT
T ss_pred CCCC-CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 4455 4566778899999999999999999988866543
No 422
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=36.65 E-value=87 Score=25.06 Aligned_cols=51 Identities=10% Similarity=-0.013 Sum_probs=35.4
Q ss_pred eEEEeeCCChHHHHHHHHHH-HcCCeEEEEecCCCCHH-HHHHHHHcCCEEEEeCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAA-AKQYRLIITMPASMSLE-RRIILRAFGAELVLTDP 124 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~-~~G~~~~ivvp~~~~~~-~~~~~~~~Ga~v~~~~~ 124 (321)
..+|+..+|.-|.+++.... ..|.+++++... +. +.+.+...+.++..+..
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~ 59 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQ---LKTRIPPEIIDHERVTVIEG 59 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESS---HHHHSCHHHHTSTTEEEEEC
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecC---ccccchhhccCCCceEEEEC
Confidence 36888889999999999988 899998887654 33 44444334445554443
No 423
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=36.61 E-value=1.8e+02 Score=24.15 Aligned_cols=43 Identities=21% Similarity=0.439 Sum_probs=29.3
Q ss_pred HHHHHhhhC-CCCCEEEEecCCchhHHHHHHHHHhcCC-CcEEEEEe
Q 020805 165 GPELWKGSG-GRIDALVSGIGTGGTITGAGKFLKEKNP-NIKLYGIE 209 (321)
Q Consensus 165 ~~Ei~~ql~-~~~d~vv~p~G~Gg~~aGi~~~~k~~~~-~~~vigv~ 209 (321)
..+++++.+ ..||+||+ .+.....|+..++++.+. ++.|+|..
T Consensus 192 ~~~~l~~~~~~~~~ai~~--~~d~~a~g~~~al~~~g~~di~vig~d 236 (309)
T 2fvy_A 192 MDAWLSGPNANKIEVVIA--NNDAMAMGAVEALKAHNKSSIPVFGVD 236 (309)
T ss_dssp HHHHHTSTTGGGCCEEEE--SSHHHHHHHHHHHHHTTCTTSCEECSB
T ss_pred HHHHHHhCCCCCccEEEE--CCchhHHHHHHHHHHcCCCCceEEecC
Confidence 344554432 26899987 456778899999998875 66666654
No 424
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=36.58 E-value=59 Score=25.15 Aligned_cols=32 Identities=16% Similarity=0.255 Sum_probs=28.1
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCC
Q 020805 72 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS 103 (321)
Q Consensus 72 ~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~ 103 (321)
.++.-.+|..|..+|...++.|.+++++-+..
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 46778999999999999999999999997654
No 425
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=36.45 E-value=2e+02 Score=24.56 Aligned_cols=69 Identities=14% Similarity=0.066 Sum_probs=38.3
Q ss_pred hHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHH--HHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 020805 50 DRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFM--AAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 123 (321)
Q Consensus 50 ~R~a~~~l~~a~~~g~~~~g~~~vv~~SsGN~g~AlA~a--a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~ 123 (321)
......+-..+.+.|. ..++..+..+........ ....++..+|++|.......++.++..|--++.++
T Consensus 78 ~~~~~gi~~~a~~~g~-----~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~~~~~~~~~~l~~~~iPvV~~~ 148 (339)
T 3h5o_A 78 LETLTGIETVLDAAGY-----QMLIGNSHYDAGQELQLLRAYLQHRPDGVLITGLSHAEPFERILSQHALPVVYMM 148 (339)
T ss_dssp HHHHHHHHHHHHHTTC-----EEEEEECTTCHHHHHHHHHHHHTTCCSEEEEECSCCCTTHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHHCCC-----EEEEEeCCCChHHHHHHHHHHHcCCCCEEEEeCCCCCHHHHHHHhcCCCCEEEEe
Confidence 3344444445566665 444544544443333222 33457788888876555455666667777777663
No 426
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=36.42 E-value=2.7e+02 Score=26.16 Aligned_cols=104 Identities=15% Similarity=0.147 Sum_probs=65.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 150 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 150 (321)
.++..-..|+.|.++|..++.+|++++++=|.. +.. ....+|.+. + +.+ ++.++- +..+++-
T Consensus 143 ~~vgIIG~G~IG~~vA~~l~~~G~~V~~~d~~~-~~~---~a~~~g~~~--~----~l~-------e~~~~a-DvV~l~~ 204 (529)
T 1ygy_A 143 KTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYV-SPA---RAAQLGIEL--L----SLD-------DLLARA-DFISVHL 204 (529)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECTTS-CHH---HHHHHTCEE--C----CHH-------HHHHHC-SEEEECC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEECCCC-Chh---HHHhcCcEE--c----CHH-------HHHhcC-CEEEECC
Confidence 467777889999999999999999988775543 332 245568764 1 122 233443 5565543
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHH--HHHHHHh
Q 020805 151 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITG--AGKFLKE 198 (321)
Q Consensus 151 ~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~~aG--i~~~~k~ 198 (321)
-.++.. ...+..+++..+ +++.+++-++.|+.+.- +..+++.
T Consensus 205 P~~~~t----~~~i~~~~~~~~--k~g~ilin~arg~iv~~~aL~~al~~ 248 (529)
T 1ygy_A 205 PKTPET----AGLIDKEALAKT--KPGVIIVNAARGGLVDEAALADAITG 248 (529)
T ss_dssp CCSTTT----TTCBCHHHHTTS--CTTEEEEECSCTTSBCHHHHHHHHHT
T ss_pred CCchHH----HHHhCHHHHhCC--CCCCEEEECCCCchhhHHHHHHHHHc
Confidence 322222 122333566666 47899999999987654 4466654
No 427
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=36.14 E-value=1.5e+02 Score=24.61 Aligned_cols=32 Identities=9% Similarity=0.075 Sum_probs=26.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 101 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp 101 (321)
...+||..+|.-|.++|......|.+++++..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 39 (260)
T 1nff_A 8 KVALVSGGARGMGASHVRAMVAEGAKVVFGDI 39 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 36788889999999999998889998777644
No 428
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=35.97 E-value=65 Score=27.94 Aligned_cols=55 Identities=15% Similarity=0.092 Sum_probs=32.4
Q ss_pred eEEEeeCCChHHHHHHHHHHHc---CCeEEEEecCCCCHHHH---HHHHHcCCEEEEeCCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAK---QYRLIITMPASMSLERR---IILRAFGAELVLTDPA 125 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~---G~~~~ivvp~~~~~~~~---~~~~~~Ga~v~~~~~~ 125 (321)
..++..++|..+..++..+-.. +-.-.|+++........ ..++..|++++.++.+
T Consensus 61 ~~i~~~~g~~~a~~~~~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 121 (382)
T 4hvk_A 61 GTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVG 121 (382)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBC
T ss_pred CeEEEECCchHHHHHHHHHhhhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccC
Confidence 4577777777776666654321 22234555554444333 3445679999999854
No 429
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=35.82 E-value=67 Score=29.58 Aligned_cols=51 Identities=10% Similarity=-0.126 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 020805 51 RIGYSMISDAEA-KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 102 (321)
Q Consensus 51 R~a~~~l~~a~~-~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~ 102 (321)
||+++.+..+.+ .|. ...+.+|+....||-|..+|.....+|.+++.+...
T Consensus 191 ~Gv~~~~~~~~~~~g~-~l~gk~vaVqG~GnVG~~aa~~L~e~GakVVavsD~ 242 (421)
T 1v9l_A 191 FGVAVATREMAKKLWG-GIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDI 242 (421)
T ss_dssp HHHHHHHHHHHHHHHS-CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred HHHHHHHHHHHHhcCC-CcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEECC
Confidence 577777776654 443 222366787888999999998888888888866544
No 430
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=35.71 E-value=49 Score=28.81 Aligned_cols=53 Identities=17% Similarity=-0.052 Sum_probs=34.5
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 020805 72 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA 125 (321)
Q Consensus 72 ~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~ 125 (321)
.++..++|..+..++..+- .+-.-.|+++...-..-...++.+|++++.++.+
T Consensus 86 ~v~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~ 138 (363)
T 3ffh_A 86 ELIFTAGVDELIELLTRVL-LDTTTNTVMATPTFVQYRQNALIEGAEVREIPLL 138 (363)
T ss_dssp GEEEESSHHHHHHHHHHHH-CSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECC
T ss_pred hEEEeCCHHHHHHHHHHHH-ccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCC
Confidence 4676777777777666554 2222345555544555667788899999988754
No 431
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=35.65 E-value=2.5e+02 Score=25.42 Aligned_cols=101 Identities=16% Similarity=0.156 Sum_probs=66.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcC-CEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFG-AELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQ 149 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~G-a~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 149 (321)
+++-.-.-|+-|.++|..++.+|++++++=|..... .| ++ .+. +. .++.++. +...++
T Consensus 146 ktlGiIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~--------~~~~~--~~~---~l-------~ell~~a-DvV~l~ 204 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLP--------LGNAT--QVQ---HL-------SDLLNMS-DVVSLH 204 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCC--------CTTCE--ECS---CH-------HHHHHHC-SEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEEcCCchhc--------cCCce--ecC---CH-------HHHHhcC-CEEEEc
Confidence 567777889999999999999999998886653221 12 22 121 11 2344444 566654
Q ss_pred CCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHH--HHHHHHHh
Q 020805 150 QFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTIT--GAGKFLKE 198 (321)
Q Consensus 150 ~~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~~a--Gi~~~~k~ 198 (321)
-..++.. ...+..+.++++ ++..+++-++.|+.+- .+..+++.
T Consensus 205 ~P~t~~t----~~li~~~~l~~m--k~ga~lIN~aRg~~vd~~aL~~aL~~ 249 (404)
T 1sc6_A 205 VPENPST----KNMMGAKEISLM--KPGSLLINASRGTVVDIPALADALAS 249 (404)
T ss_dssp CCSSTTT----TTCBCHHHHHHS--CTTEEEEECSCSSSBCHHHHHHHHHT
T ss_pred cCCChHH----HHHhhHHHHhhc--CCCeEEEECCCChHHhHHHHHHHHHc
Confidence 4333332 123445777887 5789999999999764 66777775
No 432
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=35.42 E-value=40 Score=27.72 Aligned_cols=30 Identities=23% Similarity=0.258 Sum_probs=27.0
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 020805 73 LIEPTSGNTGIGLAFMAAAKQYRLIITMPA 102 (321)
Q Consensus 73 vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~ 102 (321)
|+.-.+|..|.++|...++.|++++++-..
T Consensus 6 VvVVGgG~aGl~aA~~la~~g~~v~lie~~ 35 (232)
T 2cul_A 6 VLIVGAGFSGAETAFWLAQKGVRVGLLTQS 35 (232)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEECcCHHHHHHHHHHHHCCCCEEEEecC
Confidence 677899999999999999999999998664
No 433
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=35.33 E-value=84 Score=26.75 Aligned_cols=29 Identities=17% Similarity=0.158 Sum_probs=24.7
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 020805 72 VLIEPTSGNTGIGLAFMAAAKQYRLIITM 100 (321)
Q Consensus 72 ~vv~~SsGN~g~AlA~aa~~~G~~~~ivv 100 (321)
+|..-..|+.|.++|..++..|++++++-
T Consensus 6 kV~VIGaG~mG~~iA~~la~~G~~V~l~d 34 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFHGFAVTAYD 34 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEe
Confidence 45556889999999999999999988873
No 434
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=35.33 E-value=1.9e+02 Score=23.79 Aligned_cols=139 Identities=14% Similarity=0.100 Sum_probs=68.2
Q ss_pred HHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-CC--------------HHHHHHHHHcCC-EEE
Q 020805 57 ISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS-MS--------------LERRIILRAFGA-ELV 120 (321)
Q Consensus 57 l~~a~~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~-~~--------------~~~~~~~~~~Ga-~v~ 120 (321)
+..+.+++. +.++ .+....-..+.. .|+|++.+-... .. ..-.+.+...|. +|.
T Consensus 53 ~~~l~~~~v-----dgiI-~~~~~~~~~~~~----~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~~i~ 122 (280)
T 3gyb_A 53 ITSALSMRP-----DGII-IAQDIPDFTVPD----SLPPFVIAGTRITQASTHDSVANDDFRGAEIATKHLIDLGHTHIA 122 (280)
T ss_dssp HHHHHTTCC-----SEEE-EESCC------------CCCEEEESCCCSSSCSTTEEEECHHHHHHHHHHHHHHTTCCSEE
T ss_pred HHHHHhCCC-----CEEE-ecCCCChhhHhh----cCCCEEEECCCCCCCCCCCEEEechHHHHHHHHHHHHHCCCCeEE
Confidence 344455555 6677 443333222222 899988774332 10 112334444554 566
Q ss_pred EeCCCCCh-hHHHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHHhc
Q 020805 121 LTDPAKGM-KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEK 199 (321)
Q Consensus 121 ~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~ 199 (321)
++.+.... .++.+-.++..++.+-...............++. ...+++++- ++||+||+. +..++.|+..++++.
T Consensus 123 ~i~~~~~~~~~R~~gf~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~-~~~~ai~~~--~d~~a~g~~~al~~~ 198 (280)
T 3gyb_A 123 HLRVGSGAGLRRFESFEATMRAHGLEPLSNDYLGPAVEHAGYT-ETLALLKEH-PEVTAIFSS--NDITAIGALGAAREL 198 (280)
T ss_dssp EECCSSHHHHHHHHHHHHHHHHTTCCCEECCCCSCCCHHHHHH-HHHHHHHHC-TTCCEEEES--SHHHHHHHHHHHHHH
T ss_pred EEeCCCchHHHHHHHHHHHHHHcCcCCCcccccCCCCHHHHHH-HHHHHHhCC-CCCCEEEEC--ChHHHHHHHHHHHHc
Confidence 66654322 2223333444444421111111112222233333 344555553 679999875 567788999999988
Q ss_pred C----CCcEEEEEe
Q 020805 200 N----PNIKLYGIE 209 (321)
Q Consensus 200 ~----~~~~vigv~ 209 (321)
+ .++.|+|.+
T Consensus 199 g~~vP~di~vvg~d 212 (280)
T 3gyb_A 199 GLRVPEDLSIIGYD 212 (280)
T ss_dssp TCCTTTTCEEEEES
T ss_pred CCCCCCeeEEEEEC
Confidence 6 357888877
No 435
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=35.25 E-value=1.8e+02 Score=23.73 Aligned_cols=65 Identities=15% Similarity=0.112 Sum_probs=42.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKT 142 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~ 142 (321)
...+||..+|.-|.++|......|.+++++...... +..|...+.++-. +.++..+...+..++.
T Consensus 8 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~D~~-d~~~~~~~~~~~~~~~ 72 (250)
T 2fwm_X 8 KNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-------EQYPFATEVMDVA-DAAQVAQVCQRLLAET 72 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-------SCCSSEEEECCTT-CHHHHHHHHHHHHHHC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-------hcCCceEEEcCCC-CHHHHHHHHHHHHHHc
Confidence 367888899999999999999999998877654321 2245555555542 3344444455554443
No 436
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=35.24 E-value=1.3e+02 Score=26.92 Aligned_cols=53 Identities=13% Similarity=0.068 Sum_probs=38.4
Q ss_pred eEEEeeCC-ChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHHc------CCEEEEeC
Q 020805 71 SVLIEPTS-GNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILRAF------GAELVLTD 123 (321)
Q Consensus 71 ~~vv~~Ss-GN~g~AlA~aa~~~G~~~~ivvp~~~--~~~~~~~~~~~------Ga~v~~~~ 123 (321)
.+|+-... -|.+.+++.++.++|++++++.|+.- ++.-++.++.. |+.+..+.
T Consensus 189 lkva~vGD~~nva~Sl~~~l~~lG~~v~~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~~~ 250 (353)
T 3sds_A 189 LKIAWVGDANNVLFDLAIAATKMGVNVAVATPRGYEIPSHIVELIQKAREGVQSPGNLTQTT 250 (353)
T ss_dssp CEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHTTCSSCCCEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHhhhhccCCCeEEEEC
Confidence 44554444 46789999999999999999999964 55555555533 66777766
No 437
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=34.95 E-value=1.5e+02 Score=24.43 Aligned_cols=88 Identities=17% Similarity=0.208 Sum_probs=51.2
Q ss_pred eEEEEecCC--CC--HHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhchHHHHHh
Q 020805 95 RLIITMPAS--MS--LERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK 170 (321)
Q Consensus 95 ~~~ivvp~~--~~--~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Ei~~ 170 (321)
+.++|.-.. .- ..-.+.+...|++|+.+..... ....+...++.++.+......+.| ... ......+..++.+
T Consensus 21 k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~D-l~~-~~~v~~~~~~~~~ 97 (267)
T 3gdg_A 21 KVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRA-QGAEENVKELEKTYGIKAKAYKCQ-VDS-YESCEKLVKDVVA 97 (267)
T ss_dssp CEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSS-SHHHHHHHHHHHHHCCCEECCBCC-TTC-HHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcc-hhHHHHHHHHHHhcCCceeEEecC-CCC-HHHHHHHHHHHHH
Confidence 455555443 22 3446677788999998865422 222444555554433334333432 223 2344556667777
Q ss_pred hhCCCCCEEEEecCCc
Q 020805 171 GSGGRIDALVSGIGTG 186 (321)
Q Consensus 171 ql~~~~d~vv~p~G~G 186 (321)
+. +.+|.+|..+|..
T Consensus 98 ~~-g~id~li~nAg~~ 112 (267)
T 3gdg_A 98 DF-GQIDAFIANAGAT 112 (267)
T ss_dssp HT-SCCSEEEECCCCC
T ss_pred Hc-CCCCEEEECCCcC
Confidence 76 6799999998854
No 438
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=34.87 E-value=2.2e+02 Score=24.51 Aligned_cols=41 Identities=17% Similarity=0.172 Sum_probs=31.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHc
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAF 115 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~ 115 (321)
+.|..-..|+.|.++|..+. .|++++++ +.++.+++.....
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-aG~~V~v~---d~~~~~~~~~~~~ 53 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-SKHEVVLQ---DVSEKALEAAREQ 53 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEE---CSCHHHHHHHHHH
T ss_pred CeEEEEeeCHHHHHHHHHHH-cCCEEEEE---ECCHHHHHHHHHH
Confidence 45666788999999999999 99998888 4455566555444
No 439
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=34.77 E-value=84 Score=28.28 Aligned_cols=113 Identities=13% Similarity=0.110 Sum_probs=50.0
Q ss_pred CeEEEEecCCCCHHHHHHHHHcC-CEEEEeCCCCChhH---HHHHHHHHHHhCCCeE-EcCCC-CCCcchhhhhhchHHH
Q 020805 94 YRLIITMPASMSLERRIILRAFG-AELVLTDPAKGMKG---AVQKAEEILAKTPNAY-MLQQF-ENPANPKIHYETTGPE 167 (321)
Q Consensus 94 ~~~~ivvp~~~~~~~~~~~~~~G-a~v~~~~~~~~~~~---~~~~a~~~~~~~~~~~-~~~~~-~~~~~~~~g~~~~~~E 167 (321)
+|..|++-.+.-..--+.++.+| -++.++.+....+. ..+...+..++.+-.+ ..+.. .||.. ....-+.+
T Consensus 10 ~p~~i~~G~g~~~~l~~~l~~~g~~~~livtd~~~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~---~~v~~~~~ 86 (387)
T 3bfj_A 10 VPNVNFFGPNAISVVGERCQLLGGKKALLVTDKGLRAIKDGAVDKTLHYLREAGIEVAIFDGVEPNPKD---TNVRDGLA 86 (387)
T ss_dssp CCSEEEESTTGGGGHHHHHHHTTCSEEEEECCTTTC--CCSSHHHHHHHHHHTTCEEEEECCCCSSCBH---HHHHHHHH
T ss_pred CCCeEEECCCHHHHHHHHHHHcCCCEEEEEECcchhhccchHHHHHHHHHHHcCCeEEEECCccCCCCH---HHHHHHHH
Confidence 34445554443333344556677 56666654322222 2334444334332122 22222 22221 11222233
Q ss_pred HHhhhCCCCCEEEEecCCchhH--HHHHHHHHh-------c-------CCCcEEEEEecCC
Q 020805 168 LWKGSGGRIDALVSGIGTGGTI--TGAGKFLKE-------K-------NPNIKLYGIEPTE 212 (321)
Q Consensus 168 i~~ql~~~~d~vv~p~G~Gg~~--aGi~~~~k~-------~-------~~~~~vigv~~~~ 212 (321)
.+++ .++| +|+++|+|..+ ++....+.. . .+.+++|.|-+..
T Consensus 87 ~~~~--~~~d-~IIavGGGsv~D~aK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~ 144 (387)
T 3bfj_A 87 VFRR--EQCD-IIVTVGGGSPHDCGKGIGIAATHEGDLYQYAGIETLTNPLPPIVAVNTTA 144 (387)
T ss_dssp HHHH--TTCC-EEEEEESHHHHHHHHHHHHHHHSSSCSGGGCBSSCCCSCCCCEEEEECST
T ss_pred HHHh--cCCC-EEEEeCCcchhhHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCC
Confidence 3333 3467 67788887764 333333210 1 1456788877654
No 440
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=34.72 E-value=2.2e+02 Score=25.67 Aligned_cols=31 Identities=16% Similarity=0.108 Sum_probs=22.1
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 020805 72 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 102 (321)
Q Consensus 72 ~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~ 102 (321)
+|+...+|..|+.++.+++.+|++++++-+.
T Consensus 21 ~ili~g~g~~g~~~~~a~~~~G~~v~~v~~~ 51 (433)
T 2dwc_A 21 KILLLGSGELGKEIAIEAQRLGVEVVAVDRY 51 (433)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 4555566777788888888888887777654
No 441
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=34.55 E-value=2e+02 Score=24.03 Aligned_cols=34 Identities=18% Similarity=0.176 Sum_probs=25.6
Q ss_pred CCCCEEEEecCCchhHHHHHHHHHhcC----CCcEEEEEe
Q 020805 174 GRIDALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIE 209 (321)
Q Consensus 174 ~~~d~vv~p~G~Gg~~aGi~~~~k~~~----~~~~vigv~ 209 (321)
+.||+||+. +..++.|+..++++.+ .++.|+|.+
T Consensus 196 ~~~~ai~~~--nd~~A~g~~~al~~~G~~vP~di~vig~D 233 (303)
T 3kke_A 196 DGPTAVVVA--SVNAAVGALSTALRLGLRVPEDLSIVGIN 233 (303)
T ss_dssp TSCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEES
T ss_pred CCCcEEEEC--CHHHHHHHHHHHHHcCCCCCCceEEEEEc
Confidence 568988874 5667778899998876 257788876
No 442
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=34.53 E-value=1.9e+02 Score=24.73 Aligned_cols=56 Identities=16% Similarity=0.184 Sum_probs=37.2
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHH-HHcCCEEEEeCCC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIIL-RAFGAELVLTDPA 125 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~-~~~~~~~~-~~~Ga~v~~~~~~ 125 (321)
+..+||..+|--|.+++......|.+++++..... .....+.+ ...+.++..+..+
T Consensus 6 ~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D 63 (341)
T 3enk_A 6 GTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETD 63 (341)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCC
T ss_pred cEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEee
Confidence 36788889999999999999899999888765432 22222233 2335555555543
No 443
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=34.42 E-value=98 Score=25.27 Aligned_cols=33 Identities=15% Similarity=0.172 Sum_probs=26.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 102 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~ 102 (321)
...+|+..+|.-|.++|..-...|.+++++...
T Consensus 7 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~ 39 (251)
T 1zk4_A 7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGRH 39 (251)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 367888888999999999988899987776543
No 444
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=34.37 E-value=1.3e+02 Score=26.98 Aligned_cols=54 Identities=19% Similarity=0.151 Sum_probs=38.8
Q ss_pred eEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHH----HHHcCCEEEEeCC
Q 020805 71 SVLIEPTS--GNTGIGLAFMAAAKQYRLIITMPASM--SLERRII----LRAFGAELVLTDP 124 (321)
Q Consensus 71 ~~vv~~Ss--GN~g~AlA~aa~~~G~~~~ivvp~~~--~~~~~~~----~~~~Ga~v~~~~~ 124 (321)
.+|+-... +|.+.++..+++++|++++++.|+.- ++..++. ....|+++..+..
T Consensus 182 l~ia~vGD~~~~va~S~~~~~~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~v~~~~d 243 (358)
T 4h31_A 182 IQFAYLGDARNNVGNSLMVGAAKMGMDIRLVGPQAYWPDEELVAACQAIAKQTGGKITLTEN 243 (358)
T ss_dssp CEEEEESCTTSHHHHHHHHHHHHHTCEEEEESCGGGSCCHHHHHHHHHHHHHHTCEEEEESC
T ss_pred eEEEecCCCCcccchHHHHHHHhcCceEEEeCCcccCCCHHHHHHHHHHHHHcCCcceeccC
Confidence 34444443 58999999999999999999999853 3433333 3467999988873
No 445
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=34.32 E-value=1e+02 Score=28.69 Aligned_cols=91 Identities=16% Similarity=0.133 Sum_probs=59.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 150 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 150 (321)
++++....|+-|+++|..++.+|.+++++= ..+.+.......|.++. + .+ ++.++. +.+....
T Consensus 248 KTVgVIG~G~IGr~vA~~lrafGa~Viv~d---~dp~~a~~A~~~G~~vv--~----Le-------ElL~~A-DIVv~at 310 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGAGARVKVTE---VDPICALQAAMDGFEVV--T----LD-------DAASTA-DIVVTTT 310 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC---SSHHHHHHHHHTTCEEC--C----HH-------HHGGGC-SEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEe---CCcchhhHHHhcCceec--c----HH-------HHHhhC-CEEEECC
Confidence 678888999999999999999999876652 23344444455677652 2 22 233333 5554322
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchh
Q 020805 151 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGT 188 (321)
Q Consensus 151 ~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~ 188 (321)
.+ ...+..|.++++ +++.+++-+|-|..
T Consensus 311 -gt-------~~lI~~e~l~~M--K~GAILINvGRgdv 338 (464)
T 3n58_A 311 -GN-------KDVITIDHMRKM--KDMCIVGNIGHFDN 338 (464)
T ss_dssp -SS-------SSSBCHHHHHHS--CTTEEEEECSSSTT
T ss_pred -CC-------ccccCHHHHhcC--CCCeEEEEcCCCCc
Confidence 11 224556778887 57899999998874
No 446
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=34.00 E-value=1.2e+02 Score=25.11 Aligned_cols=32 Identities=13% Similarity=0.073 Sum_probs=26.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 101 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp 101 (321)
...+||..+|.-|.++|......|.+++++..
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 44 (263)
T 3ak4_A 13 RKAIVTGGSKGIGAAIARALDKAGATVAIADL 44 (263)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 36788888999999999999899998777644
No 447
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=33.95 E-value=1.2e+02 Score=27.95 Aligned_cols=53 Identities=11% Similarity=0.046 Sum_probs=37.6
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCe-EEEEecCCC-----CHHHHHHHHHcCCEEEEeC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYR-LIITMPASM-----SLERRIILRAFGAELVLTD 123 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~-~~ivvp~~~-----~~~~~~~~~~~Ga~v~~~~ 123 (321)
+.|+.-.+||.|.-+|..+.+.|.+ ++++.+... ....++.++..|.+++.-.
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~~~~e~~~~~~~Gv~~~~~~ 323 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQREVAHAEEEGVEFIWQA 323 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCSSCHHHHHHHHHTTCEEECCS
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccCCCCCHHHHHHHHHCCCEEEeCC
Confidence 5677789999999999999999985 888865432 2333555666777665443
No 448
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=33.79 E-value=1.1e+02 Score=25.72 Aligned_cols=33 Identities=21% Similarity=0.285 Sum_probs=23.9
Q ss_pred eEEEeeCCChHH---HHHHHHHHHcCCeEEEEecCC
Q 020805 71 SVLIEPTSGNTG---IGLAFMAAAKQYRLIITMPAS 103 (321)
Q Consensus 71 ~~vv~~SsGN~g---~AlA~aa~~~G~~~~ivvp~~ 103 (321)
+.+|.+..||.| ..+|...+..|++++|+++..
T Consensus 60 ~v~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~~ 95 (246)
T 1jzt_A 60 HVFVIAGPGNNGGDGLVCARHLKLFGYNPVVFYPKR 95 (246)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEcCC
Confidence 567778888876 455555666799999998753
No 449
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=33.76 E-value=1.1e+02 Score=25.30 Aligned_cols=33 Identities=21% Similarity=0.266 Sum_probs=26.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 102 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~ 102 (321)
...+||..+|--|.++|......|.+++++-..
T Consensus 8 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~ 40 (250)
T 3nyw_A 8 GLAIITGASQGIGAVIAAGLATDGYRVVLIARS 40 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHTCEEEEEESC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 367888888889999999988889987776443
No 450
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=33.76 E-value=2.3e+02 Score=24.35 Aligned_cols=146 Identities=10% Similarity=0.059 Sum_probs=78.2
Q ss_pred HHHHHHHHHHcC-CCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC--------------CCH-----HHHHHH
Q 020805 53 GYSMISDAEAKG-LITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS--------------MSL-----ERRIIL 112 (321)
Q Consensus 53 a~~~l~~a~~~g-~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~--------------~~~-----~~~~~~ 112 (321)
+...+.++.+++ + ..|+...+.....+++-.+...++|.+...... .+. .-.+.+
T Consensus 69 ~~~~~~~l~~~~~v-----~~iiG~~~s~~~~~~~~~~~~~~iP~i~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l 143 (366)
T 3td9_A 69 AANAAARAIDKEKV-----LAIIGEVASAHSLAIAPIAEENKVPMVTPASTNPLVTQGRKFVSRVCFIDPFQGAAMAVFA 143 (366)
T ss_dssp HHHHHHHHHHTSCC-----SEEEECSSHHHHHHHHHHHHHTTCCEEESSCCCGGGTTTCSSEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCe-----EEEEccCCchhHHHHHHHHHhCCCeEEecCCCCccccCCCCCEEEEeCCcHHHHHHHHHHH
Confidence 344555555554 4 557766666677788888999999988764311 111 112344
Q ss_pred -HHcCC-EEEEe-CCCCChh-HHHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchh
Q 020805 113 -RAFGA-ELVLT-DPAKGMK-GAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGT 188 (321)
Q Consensus 113 -~~~Ga-~v~~~-~~~~~~~-~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~ 188 (321)
+.+|. +|.++ ..+..+. ...+..++..++.+..+....+... . .-+.....+|.+ .+||.||++ +++..
T Consensus 144 ~~~~g~~~iaii~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~-~--~d~~~~~~~l~~---~~~d~v~~~-~~~~~ 216 (366)
T 3td9_A 144 YKNLGAKRVVVFTDVEQDYSVGLSNFFINKFTELGGQVKRVFFRSG-D--QDFSAQLSVAMS---FNPDAIYIT-GYYPE 216 (366)
T ss_dssp HHTSCCCEEEEEEETTCHHHHHHHHHHHHHHHHTTCEEEEEEECTT-C--CCCHHHHHHHHH---TCCSEEEEC-SCHHH
T ss_pred HHhcCCcEEEEEEeCCCcHHHHHHHHHHHHHHHCCCEEEEEEeCCC-C--ccHHHHHHHHHh---cCCCEEEEc-cchhH
Confidence 44574 55555 2222222 2223334444554332211111110 0 011222223322 468988874 66788
Q ss_pred HHHHHHHHHhcCCCcEEEEEec
Q 020805 189 ITGAGKFLKEKNPNIKLYGIEP 210 (321)
Q Consensus 189 ~aGi~~~~k~~~~~~~vigv~~ 210 (321)
+.++.+.+++.+.++++++...
T Consensus 217 a~~~~~~~~~~g~~~~~~~~~~ 238 (366)
T 3td9_A 217 IALISRQARQLGFTGYILAGDG 238 (366)
T ss_dssp HHHHHHHHHHTTCCSEEEECGG
T ss_pred HHHHHHHHHHcCCCceEEeeCC
Confidence 8889999999888888877653
No 451
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=33.75 E-value=42 Score=28.72 Aligned_cols=28 Identities=7% Similarity=0.140 Sum_probs=24.8
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 020805 73 LIEPTSGNTGIGLAFMAAAKQYRLIITM 100 (321)
Q Consensus 73 vv~~SsGN~g~AlA~aa~~~G~~~~ivv 100 (321)
|+.-.+|..|.+.|..+++.|+++++|=
T Consensus 9 VvIIGaGpAGlsAA~~lar~g~~v~lie 36 (304)
T 4fk1_A 9 CAVIGAGPAGLNASLVLGRARKQIALFD 36 (304)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEe
Confidence 6667889999999999999999999883
No 452
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=33.64 E-value=1e+02 Score=25.64 Aligned_cols=33 Identities=12% Similarity=0.056 Sum_probs=27.4
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 102 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~ 102 (321)
...+||..+|.-|.++|......|.+++++...
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 40 (267)
T 2gdz_A 8 KVALVTGAAQGIGRAFAEALLLKGAKVALVDWN 40 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCCEEEEEECC
Confidence 367888899999999999999999987776543
No 453
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=33.58 E-value=1.2e+02 Score=27.94 Aligned_cols=97 Identities=15% Similarity=0.172 Sum_probs=59.0
Q ss_pred CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCC
Q 020805 64 GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTP 143 (321)
Q Consensus 64 g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~ 143 (321)
+..-.| ++++....|+-|.++|..++.+|.+++++ +..+.+.......|.++. +.+ +..++.
T Consensus 215 ~~~L~G-ktV~ViG~G~IGk~vA~~Lra~Ga~Viv~---D~dp~ra~~A~~~G~~v~------~Le-------eal~~A- 276 (435)
T 3gvp_A 215 DMMFGG-KQVVVCGYGEVGKGCCAALKAMGSIVYVT---EIDPICALQACMDGFRLV------KLN-------EVIRQV- 276 (435)
T ss_dssp CCCCTT-CEEEEECCSHHHHHHHHHHHHTTCEEEEE---CSCHHHHHHHHHTTCEEC------CHH-------HHTTTC-
T ss_pred CceecC-CEEEEEeeCHHHHHHHHHHHHCCCEEEEE---eCChhhhHHHHHcCCEec------cHH-------HHHhcC-
Confidence 333334 67888999999999999999999985554 223444444556676542 122 222222
Q ss_pred CeEEcCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchh
Q 020805 144 NAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGT 188 (321)
Q Consensus 144 ~~~~~~~~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~ 188 (321)
+.+.... .+ ...+..|.++++ +++.+++-+|.|..
T Consensus 277 DIVi~at-gt-------~~lI~~e~l~~M--K~gailINvgrg~~ 311 (435)
T 3gvp_A 277 DIVITCT-GN-------KNVVTREHLDRM--KNSCIVCNMGHSNT 311 (435)
T ss_dssp SEEEECS-SC-------SCSBCHHHHHHS--CTTEEEEECSSTTT
T ss_pred CEEEECC-CC-------cccCCHHHHHhc--CCCcEEEEecCCCc
Confidence 4444421 11 123445777777 46788888888764
No 454
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=33.57 E-value=1.2e+02 Score=25.29 Aligned_cols=55 Identities=18% Similarity=0.116 Sum_probs=35.3
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHc--CCEEEEeCC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAF--GAELVLTDP 124 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~-~~~~~~~~~~--Ga~v~~~~~ 124 (321)
...+||..+|--|.++|..-...|.+++++-..... ....+.++.. +.++..+..
T Consensus 11 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~ 68 (267)
T 3t4x_A 11 KTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVA 68 (267)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEec
Confidence 367888888888999999988899987776543211 1223334433 566665544
No 455
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=33.54 E-value=2e+02 Score=23.62 Aligned_cols=33 Identities=15% Similarity=0.088 Sum_probs=27.2
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 102 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~ 102 (321)
...+||..+|.-|.++|......|.+++++-..
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (256)
T 2d1y_A 7 KGVLVTGGARGIGRAIAQAFAREGALVALCDLR 39 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 367888899999999999988999987776544
No 456
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=33.36 E-value=70 Score=29.46 Aligned_cols=52 Identities=8% Similarity=-0.048 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC
Q 020805 51 RIGYSMISDAEA-KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS 103 (321)
Q Consensus 51 R~a~~~l~~a~~-~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~ 103 (321)
||+.+.+..+.+ .|. ...+.+|+....||-|..+|.....+|.+++.+...+
T Consensus 193 ~Gv~~~~~~~~~~~g~-~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~ 245 (421)
T 2yfq_A 193 FGVAVVVRESAKRFGI-KMEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIAEWD 245 (421)
T ss_dssp HHHHHHHHHHHHHTTC-CGGGSCEEEECCSHHHHHHHHHHHHTTCCEEECCBCC
T ss_pred HHHHHHHHHHHHhcCC-CccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEecC
Confidence 577878777664 443 3223568888899999999988888888877665544
No 457
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=33.28 E-value=2e+02 Score=23.46 Aligned_cols=85 Identities=18% Similarity=0.133 Sum_probs=49.0
Q ss_pred eEEEEecCCC--CHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhchHHHHHhhh
Q 020805 95 RLIITMPASM--SLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGS 172 (321)
Q Consensus 95 ~~~ivvp~~~--~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Ei~~ql 172 (321)
+.++|.-..- -..-.+.+...|++|+.++.+ .+...+...++.+.. ......+. |... ......+..++.++.
T Consensus 10 k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~-~~~~~~~~-D~~~-~~~~~~~~~~~~~~~ 84 (253)
T 3qiv_A 10 KVGIVTGSGGGIGQAYAEALAREGAAVVVADIN--AEAAEAVAKQIVADG-GTAISVAV-DVSD-PESAKAMADRTLAEF 84 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTT-CEEEEEEC-CTTS-HHHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC--HHHHHHHHHHHHhcC-CcEEEEEc-cCCC-HHHHHHHHHHHHHHc
Confidence 4445544432 234466777889999998863 234444455554433 33322233 3333 234455666777777
Q ss_pred CCCCCEEEEecCC
Q 020805 173 GGRIDALVSGIGT 185 (321)
Q Consensus 173 ~~~~d~vv~p~G~ 185 (321)
+.+|.+|..+|.
T Consensus 85 -g~id~li~~Ag~ 96 (253)
T 3qiv_A 85 -GGIDYLVNNAAI 96 (253)
T ss_dssp -SCCCEEEECCCC
T ss_pred -CCCCEEEECCCc
Confidence 579999999886
No 458
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=33.20 E-value=73 Score=27.57 Aligned_cols=46 Identities=13% Similarity=0.083 Sum_probs=34.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAEL 119 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v 119 (321)
.+|..-..|+.|.++|......|.+++++-+ .+.+.+.+...|+++
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr---~~~~~~~l~~~g~~~ 67 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNR---TLSKCDELVEHGASV 67 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS---SGGGGHHHHHTTCEE
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeC---CHHHHHHHHHCCCeE
Confidence 4566678899999999999999998887733 345566666777653
No 459
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=33.09 E-value=2.5e+02 Score=24.58 Aligned_cols=113 Identities=16% Similarity=0.146 Sum_probs=66.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 150 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 150 (321)
.+|..-..|+.|.++|..++.+|++++++-+... . +....+|.+. + +.+ ++.++- +...+.-
T Consensus 147 ~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~-~---~~~~~~g~~~--~----~l~-------e~l~~a-DiVil~v 208 (333)
T 2d0i_A 147 KKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRK-V---NVEKELKARY--M----DID-------ELLEKS-DIVILAL 208 (333)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCC-H---HHHHHHTEEE--C----CHH-------HHHHHC-SEEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc-h---hhhhhcCcee--c----CHH-------HHHhhC-CEEEEcC
Confidence 5677778899999999999999998877655432 2 2334456532 1 122 223343 5555443
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHH--HHHHHHHhcCCCcEEEEEec
Q 020805 151 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTIT--GAGKFLKEKNPNIKLYGIEP 210 (321)
Q Consensus 151 ~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~~a--Gi~~~~k~~~~~~~vigv~~ 210 (321)
..++.. ...+..++++.+ +++ +++-++.|.... .+..+++. ..+.-.|.+.
T Consensus 209 p~~~~t----~~~i~~~~~~~m--k~g-ilin~srg~~vd~~aL~~aL~~--~~i~gaglDv 261 (333)
T 2d0i_A 209 PLTRDT----YHIINEERVKKL--EGK-YLVNIGRGALVDEKAVTEAIKQ--GKLKGYATDV 261 (333)
T ss_dssp CCCTTT----TTSBCHHHHHHT--BTC-EEEECSCGGGBCHHHHHHHHHT--TCBCEEEESC
T ss_pred CCChHH----HHHhCHHHHhhC--CCC-EEEECCCCcccCHHHHHHHHHc--CCceEEEecC
Confidence 333222 123334566676 457 889999998773 45667764 2334455553
No 460
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=33.07 E-value=1.5e+02 Score=24.72 Aligned_cols=67 Identities=15% Similarity=0.009 Sum_probs=41.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAK 141 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~ 141 (321)
..+||..+|--|.++|......|.+++++... ..+.+.+.......+.++-. +.++..+...+..++
T Consensus 18 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~Dv~-d~~~v~~~~~~~~~~ 84 (266)
T 3p19_A 18 LVVITGASSGIGEAIARRFSEEGHPLLLLARR---VERLKALNLPNTLCAQVDVT-DKYTFDTAITRAEKI 84 (266)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCCEEEEESC---HHHHHTTCCTTEEEEECCTT-CHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHhhcCCceEEEecCC-CHHHHHHHHHHHHHH
Confidence 67888888999999999999999998877543 33443332223344444432 334444444555444
No 461
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=33.01 E-value=1.2e+02 Score=25.07 Aligned_cols=32 Identities=16% Similarity=0.145 Sum_probs=26.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 101 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp 101 (321)
...+||..+|.-|.++|......|.+++++..
T Consensus 17 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r 48 (278)
T 2bgk_A 17 KVAIITGGAGGIGETTAKLFVRYGAKVVIADI 48 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcC
Confidence 36788889999999999998889998777643
No 462
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=33.01 E-value=1.3e+02 Score=27.87 Aligned_cols=91 Identities=18% Similarity=0.165 Sum_probs=58.5
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 150 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 150 (321)
++|+...-|+-|.++|..++.+|.+++++=+ .+.+.......|.++. +.+ ++.++- +.+....
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~---~p~~a~~A~~~G~~~~------sL~-------eal~~A-DVVilt~ 274 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGFGARVVVTEV---DPINALQAAMEGYQVL------LVE-------DVVEEA-HIFVTTT 274 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS---CHHHHHHHHHTTCEEC------CHH-------HHTTTC-SEEEECS
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECC---ChhhhHHHHHhCCeec------CHH-------HHHhhC-CEEEECC
Confidence 6688889999999999999999998666533 3455555566787653 122 222333 5555422
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchh
Q 020805 151 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGT 188 (321)
Q Consensus 151 ~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~ 188 (321)
. +.. .+..|.++++ +++.|++-+|.|..
T Consensus 275 g-t~~-------iI~~e~l~~M--K~gAIVINvgRg~v 302 (436)
T 3h9u_A 275 G-NDD-------IITSEHFPRM--RDDAIVCNIGHFDT 302 (436)
T ss_dssp S-CSC-------SBCTTTGGGC--CTTEEEEECSSSGG
T ss_pred C-CcC-------ccCHHHHhhc--CCCcEEEEeCCCCC
Confidence 1 111 1223556776 57899999998875
No 463
>3v8e_A Nicotinamidase; hydrolase; HET: JJJ; 2.71A {Saccharomyces cerevisiae} PDB: 2h0r_A
Probab=33.00 E-value=1.5e+02 Score=24.21 Aligned_cols=50 Identities=20% Similarity=0.122 Sum_probs=34.1
Q ss_pred eEEEeeCCChHH-HHHHHHHHHcCCeEEEEecC----CCC----HHHHHHHHHcCCEEE
Q 020805 71 SVLIEPTSGNTG-IGLAFMAAAKQYRLIITMPA----SMS----LERRIILRAFGAELV 120 (321)
Q Consensus 71 ~~vv~~SsGN~g-~AlA~aa~~~G~~~~ivvp~----~~~----~~~~~~~~~~Ga~v~ 120 (321)
..+++.-..+.+ .+.|.-|..+|++++|+... +.. ..-++.|+..|++++
T Consensus 156 ~l~i~G~~t~~CV~~Ta~~a~~~g~~v~v~~Da~~~~~~~~~~~~~al~~m~~~Gv~i~ 214 (216)
T 3v8e_A 156 EVYIVGVALEYXVKATAISAAELGYKTTVLLDYTRPISDDPEVINKVKEELKAHNINVV 214 (216)
T ss_dssp EEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSSCCHHHHHHHHHHHHHTTCEEE
T ss_pred EEEEEEeccccHHHHHHHHHHHCCCEEEEeccccCCCCcccHHHHHHHHHHHHcCCEEe
Confidence 455666666777 67777788899998888653 112 234667888888875
No 464
>3sg0_A Extracellular ligand-binding receptor; structural genomics, PSI-biology; HET: 173; 1.20A {Rhodopseudomonas palustris} PDB: 4dqd_A*
Probab=32.96 E-value=2.4e+02 Score=24.30 Aligned_cols=144 Identities=13% Similarity=0.073 Sum_probs=75.0
Q ss_pred HHHHHHHHHc-CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC--------C---------CC-----HHHHH
Q 020805 54 YSMISDAEAK-GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA--------S---------MS-----LERRI 110 (321)
Q Consensus 54 ~~~l~~a~~~-g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~--------~---------~~-----~~~~~ 110 (321)
...+.+..++ ++ ..|+...+.....+++-.+...++|.+..... . .+ ..-.+
T Consensus 78 ~~~~~~l~~~~~v-----~~iig~~~s~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (386)
T 3sg0_A 78 AQNARKLLSEEKV-----DVLIGSSLTPVSLPLIDIAAEAKTPLMTMAAAAILVAPMDERRKWVYKVVPNDDIMAEAIGK 152 (386)
T ss_dssp HHHHHHHHHTSCC-----SEEECCSSHHHHHHHHHHHHHTTCCEEECCCCGGGTCSCCTTGGGEEECSCCHHHHHHHHHH
T ss_pred HHHHHHHHhhcCc-----eEEECCCCchhHHHHHHHHHhcCCeEEEecCCCccccccCCCCCcEEecCCCcHHHHHHHHH
Confidence 3345555555 44 55675555566677788899999998876431 0 11 12234
Q ss_pred HHHHcCC-EEEEeCCCCCh-hHHHHHHHHHHHhCCCeEEcC-CCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCch
Q 020805 111 ILRAFGA-ELVLTDPAKGM-KGAVQKAEEILAKTPNAYMLQ-QFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGG 187 (321)
Q Consensus 111 ~~~~~Ga-~v~~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg 187 (321)
.+..+|. +|.++..+..+ .+..+..++..++. +.-.+. ....+.. .-+.....+|. + .+||.||++ +.+.
T Consensus 153 ~l~~~g~~~ia~i~~~~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~--~d~~~~~~~~~-~--~~~dav~~~-~~~~ 225 (386)
T 3sg0_A 153 YIAKTGAKKVGYIGFSDAYGEGYYKVLAAAAPKL-GFELTTHEVYARSD--ASVTGQVLKII-A--TKPDAVFIA-SAGT 225 (386)
T ss_dssp HHHHTTCCEEEEEEESSHHHHHHHHHHHHHHHHH-TCEECCCEEECTTC--SCCHHHHHHHH-H--TCCSEEEEE-CCSG
T ss_pred HHHhcCCCEEEEEecCchHHHHHHHHHHHHHHHc-CCEEEEEEeeCCCC--CcHHHHHHHHH-h--cCCCEEEEe-cCcc
Confidence 5556674 55555432221 12333334444443 222211 1000000 01111122222 2 368988775 4566
Q ss_pred hHHHHHHHHHhcCCCcEEEEEe
Q 020805 188 TITGAGKFLKEKNPNIKLYGIE 209 (321)
Q Consensus 188 ~~aGi~~~~k~~~~~~~vigv~ 209 (321)
...++.+.+++.+-++++++..
T Consensus 226 ~a~~~~~~~~~~g~~~~~~~~~ 247 (386)
T 3sg0_A 226 PAVLPQKALRERGFKGAIYQTH 247 (386)
T ss_dssp GGHHHHHHHHHTTCCSEEECCG
T ss_pred hHHHHHHHHHHcCCCCcEEecc
Confidence 7788999999988777877654
No 465
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=32.93 E-value=1.1e+02 Score=26.12 Aligned_cols=45 Identities=18% Similarity=-0.027 Sum_probs=36.4
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE
Q 020805 72 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAEL 119 (321)
Q Consensus 72 ~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v 119 (321)
+|..-..|+.|.++|......|.+++++ +..+.+.+.+...|...
T Consensus 9 ~I~iIG~G~mG~~~a~~l~~~G~~V~~~---dr~~~~~~~~~~~g~~~ 53 (303)
T 3g0o_A 9 HVGIVGLGSMGMGAARSCLRAGLSTWGA---DLNPQACANLLAEGACG 53 (303)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEE---CSCHHHHHHHHHTTCSE
T ss_pred eEEEECCCHHHHHHHHHHHHCCCeEEEE---ECCHHHHHHHHHcCCcc
Confidence 4666688999999999999999998887 44567788888778755
No 466
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=32.89 E-value=89 Score=28.04 Aligned_cols=46 Identities=15% Similarity=0.188 Sum_probs=33.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH-cCCEE
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRA-FGAEL 119 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~-~Ga~v 119 (321)
.+|+....|+-|.++|..++.+|.+++++-+ .+.+.+.++. +|+++
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~---~~~~l~~~~~~~g~~~ 215 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDI---NIDKLRQLDAEFCGRI 215 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHTTTSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeC---CHHHHHHHHHhcCCee
Confidence 4566666799999999999999997655522 3456665654 77764
No 467
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=32.88 E-value=1.1e+02 Score=26.10 Aligned_cols=53 Identities=11% Similarity=0.075 Sum_probs=34.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEe-cCCCC-HHHHHHHH-HcCCEEEEeC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITM-PASMS-LERRIILR-AFGAELVLTD 123 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivv-p~~~~-~~~~~~~~-~~Ga~v~~~~ 123 (321)
..+||..+|--|.++|..-...|.+++++. ..... ....+.++ ..|.++..+.
T Consensus 11 ~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~ 66 (291)
T 1e7w_A 11 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQ 66 (291)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred EEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEE
Confidence 668888888888999998888999877765 32211 11122333 5676666554
No 468
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=32.61 E-value=1.1e+02 Score=26.04 Aligned_cols=46 Identities=13% Similarity=0.025 Sum_probs=35.2
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 020805 72 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 120 (321)
Q Consensus 72 ~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~ 120 (321)
+|..-..|+.|.++|......|.+++++-+ .+.+.+.++..|.++.
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r---~~~~~~~~~~~g~~~~ 50 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGNDVTLIDQ---WPAHIEAIRKNGLIAD 50 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECS---CHHHHHHHHHHCEEEE
T ss_pred eEEEECcCHHHHHHHHHHHhCCCcEEEEEC---CHHHHHHHHhCCEEEE
Confidence 355567899999999999999998887733 4566777777786654
No 469
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=32.55 E-value=2.1e+02 Score=23.55 Aligned_cols=74 Identities=27% Similarity=0.257 Sum_probs=43.9
Q ss_pred HHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCc
Q 020805 107 ERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTG 186 (321)
Q Consensus 107 ~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~G 186 (321)
.-.+.+...|++|+.++.+ .+...+...++.+......++ +. |... ......+..++.++. +.+|.+|..+|..
T Consensus 27 ~ia~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~-~~-Dv~d-~~~v~~~~~~~~~~~-g~id~lv~nAg~~ 100 (256)
T 3gaf_A 27 AIAGTFAKAGASVVVTDLK--SEGAEAVAAAIRQAGGKAIGL-EC-NVTD-EQHREAVIKAALDQF-GKITVLVNNAGGG 100 (256)
T ss_dssp HHHHHHHHHTCEEEEEESS--HHHHHHHHHHHHHTTCCEEEE-EC-CTTC-HHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred HHHHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcCCcEEEE-EC-CCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 4456677789999998853 233344444554433233332 22 2223 234455666777777 5799999998864
No 470
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=32.48 E-value=1.6e+02 Score=24.55 Aligned_cols=87 Identities=15% Similarity=0.093 Sum_probs=48.0
Q ss_pred eEEEEecCCC--CHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhchHHHHHhhh
Q 020805 95 RLIITMPASM--SLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGS 172 (321)
Q Consensus 95 ~~~ivvp~~~--~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Ei~~ql 172 (321)
+.++|.-..- -..-.+.+...|++|+.++.+ .+...+...++.+..+......+. |... ......+..++.++.
T Consensus 21 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~~-Dv~~-~~~v~~~~~~~~~~~ 96 (266)
T 4egf_A 21 KRALITGATKGIGADIARAFAAAGARLVLSGRD--VSELDAARRALGEQFGTDVHTVAI-DLAE-PDAPAELARRAAEAF 96 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHHCCCEEEEEC-CTTS-TTHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHHHHhcCCcEEEEEe-cCCC-HHHHHHHHHHHHHHc
Confidence 4444444332 234566777889999998863 233444445554422222222222 2222 223345556777777
Q ss_pred CCCCCEEEEecCCc
Q 020805 173 GGRIDALVSGIGTG 186 (321)
Q Consensus 173 ~~~~d~vv~p~G~G 186 (321)
+.+|.+|..+|..
T Consensus 97 -g~id~lv~nAg~~ 109 (266)
T 4egf_A 97 -GGLDVLVNNAGIS 109 (266)
T ss_dssp -TSCSEEEEECCCC
T ss_pred -CCCCEEEECCCcC
Confidence 5799999998864
No 471
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=32.46 E-value=91 Score=23.13 Aligned_cols=50 Identities=16% Similarity=0.057 Sum_probs=30.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 120 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~ 120 (321)
+.++.+........+.-.|...|.+.+++.+....++-.+..+.+|.+++
T Consensus 60 Dlavi~~p~~~v~~~v~e~~~~g~k~v~~~~G~~~~e~~~~a~~~Girvv 109 (122)
T 3ff4_A 60 DTVTLYINPQNQLSEYNYILSLKPKRVIFNPGTENEELEEILSENGIEPV 109 (122)
T ss_dssp CEEEECSCHHHHGGGHHHHHHHCCSEEEECTTCCCHHHHHHHHHTTCEEE
T ss_pred CEEEEEeCHHHHHHHHHHHHhcCCCEEEECCCCChHHHHHHHHHcCCeEE
Confidence 34455554455555555666777776655555555666666777777665
No 472
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=32.37 E-value=2.2e+02 Score=23.72 Aligned_cols=32 Identities=16% Similarity=0.212 Sum_probs=26.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 020805 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 101 (321)
Q Consensus 70 ~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp 101 (321)
...+||..+|--|.++|..-...|.+++++-.
T Consensus 10 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 41 (270)
T 1yde_A 10 KVVVVTGGGRGIGAGIVRAFVNSGARVVICDK 41 (270)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 36788888899999999999899998776643
No 473
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=32.33 E-value=48 Score=29.69 Aligned_cols=33 Identities=12% Similarity=-0.007 Sum_probs=28.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS 103 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~ 103 (321)
..|+...+|-.|.++|+..++.|++++|+=...
T Consensus 24 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~ 56 (407)
T 3rp8_A 24 MKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVK 56 (407)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 357788999999999999999999998885543
No 474
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=32.18 E-value=2.9e+02 Score=31.75 Aligned_cols=72 Identities=18% Similarity=0.213 Sum_probs=47.8
Q ss_pred CCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--C---HHHHHHHHHcCCEEEEeCCCCC-hhHHHHHHHHH
Q 020805 67 TPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM--S---LERRIILRAFGAELVLTDPAKG-MKGAVQKAEEI 138 (321)
Q Consensus 67 ~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~--~---~~~~~~~~~~Ga~v~~~~~~~~-~~~~~~~a~~~ 138 (321)
.++...+||..+|--|.++|..-...|.+.++++..+. . ...++.++..|.+++.+..+-. .++..+...+.
T Consensus 1882 ~~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~ 1959 (2512)
T 2vz8_A 1882 PPHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEA 1959 (2512)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHH
Confidence 34557788888889999999998899998666665432 1 2335566778999988765432 33333444443
No 475
>4evq_A Putative ABC transporter subunit, substrate-bindi component; structural genomics, PSI-biology, midwest center for structu genomics; HET: MSE PHB; 1.40A {Rhodopseudomonas palustris} PDB: 4evr_A
Probab=32.07 E-value=2.1e+02 Score=24.57 Aligned_cols=133 Identities=13% Similarity=0.073 Sum_probs=70.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC----------------CCH-----HHHHHHHHcCC-EEEEeCCCCCh
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS----------------MSL-----ERRIILRAFGA-ELVLTDPAKGM 128 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~----------------~~~-----~~~~~~~~~Ga-~v~~~~~~~~~ 128 (321)
..|+...+.....+++-.+...++|.+.+.... .+. .-.+.+...|. +|.++..+..+
T Consensus 84 ~~iig~~~s~~~~~~~~~~~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ia~i~~~~~~ 163 (375)
T 4evq_A 84 DVLIGTVHSGVAMAMVKIAREDGIPTIVPNAGADIITRAMCAPNVFRTSFANGQIGRATGDAMIKAGLKKAVTVTWKYAA 163 (375)
T ss_dssp SEEEECSSHHHHHHHHHHHHHHCCCEEESSCCCGGGGTTTCCTTEEESSCCHHHHHHHHHHHHHHTTCCEEEEEEESSHH
T ss_pred eEEEcCCccHHHHHHHHHHHHcCceEEecCCCChhhcccCCCCCEEEeeCChHhHHHHHHHHHHHcCCcEEEEEecCchH
Confidence 566766655666777888899999987543110 011 12345555675 55455432211
Q ss_pred -hHHHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHHhcCCCcEEEE
Q 020805 129 -KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYG 207 (321)
Q Consensus 129 -~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Ei~~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~~~~vig 207 (321)
.+..+..++..++.+..+.......+.. .-+......|. + .+||+||+. +++....++.+.+++.+-.+.+++
T Consensus 164 ~~~~~~~~~~~l~~~G~~v~~~~~~~~~~--~d~~~~~~~l~-~--~~~dai~~~-~~~~~a~~~~~~~~~~g~~vp~~~ 237 (375)
T 4evq_A 164 GEEMVSGFKKSFTAGKGEVVKDITIAFPD--VEFQSALAEIA-S--LKPDCVYAF-FSGGGALKFIKDYAAANLGIPLWG 237 (375)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEEECTTC--CCCHHHHHHHH-H--HCCSEEEEE-CCTHHHHHHHHHHHHTTCCCCEEE
T ss_pred HHHHHHHHHHHHHHcCCeEEEEEecCCCC--ccHHHHHHHHH-h--cCCCEEEEe-cCcchHHHHHHHHHHcCCCceEEe
Confidence 1233334444455432221100000000 00111222222 2 258988875 556788899999999888888887
Q ss_pred Ee
Q 020805 208 IE 209 (321)
Q Consensus 208 v~ 209 (321)
..
T Consensus 238 ~~ 239 (375)
T 4evq_A 238 PG 239 (375)
T ss_dssp EG
T ss_pred cC
Confidence 64
No 476
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=32.05 E-value=99 Score=26.64 Aligned_cols=45 Identities=24% Similarity=0.127 Sum_probs=35.4
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE
Q 020805 72 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAEL 119 (321)
Q Consensus 72 ~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v 119 (321)
+|..-..|+.|.++|......|++++++ +.++.+.+.+...|+..
T Consensus 11 ~IgiIG~G~mG~~~A~~l~~~G~~V~~~---dr~~~~~~~~~~~g~~~ 55 (306)
T 3l6d_A 11 DVSVIGLGAMGTIMAQVLLKQGKRVAIW---NRSPGKAAALVAAGAHL 55 (306)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEE---CSSHHHHHHHHHHTCEE
T ss_pred eEEEECCCHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHHCCCee
Confidence 3555688999999999999999998887 44567777777778643
No 477
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=32.03 E-value=61 Score=29.00 Aligned_cols=32 Identities=19% Similarity=0.251 Sum_probs=28.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 102 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~ 102 (321)
++|..-.+|..|+.++.+|+++|++++++-|.
T Consensus 13 ~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~ 44 (377)
T 3orq_A 13 ATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPS 44 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 45777888999999999999999999998765
No 478
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=32.01 E-value=1.9e+02 Score=23.88 Aligned_cols=87 Identities=17% Similarity=0.192 Sum_probs=49.2
Q ss_pred eEEEEecCC----CCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCC-eEEcCCCCCCcchhhhhhchHHHHH
Q 020805 95 RLIITMPAS----MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPN-AYMLQQFENPANPKIHYETTGPELW 169 (321)
Q Consensus 95 ~~~ivvp~~----~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~Ei~ 169 (321)
+.++|+-.. .-..-.+.+...|++|+.+..+ +...+...++.++.++ .....+. |... ......+..++.
T Consensus 8 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~~-D~~~-~~~v~~~~~~~~ 82 (266)
T 3oig_A 8 RNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAG---ERLEKSVHELAGTLDRNDSIILPC-DVTN-DAEIETCFASIK 82 (266)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS---GGGHHHHHHHHHTSSSCCCEEEEC-CCSS-SHHHHHHHHHHH
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCc---hHHHHHHHHHHHhcCCCCceEEeC-CCCC-HHHHHHHHHHHH
Confidence 455555543 3344567778889999988754 2233344455444322 1211122 2222 233455666777
Q ss_pred hhhCCCCCEEEEecCCch
Q 020805 170 KGSGGRIDALVSGIGTGG 187 (321)
Q Consensus 170 ~ql~~~~d~vv~p~G~Gg 187 (321)
++. +.+|.+|..+|...
T Consensus 83 ~~~-g~id~li~~Ag~~~ 99 (266)
T 3oig_A 83 EQV-GVIHGIAHCIAFAN 99 (266)
T ss_dssp HHH-SCCCEEEECCCCCC
T ss_pred HHh-CCeeEEEEcccccc
Confidence 777 57999999988653
No 479
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=31.97 E-value=96 Score=28.16 Aligned_cols=52 Identities=12% Similarity=-0.026 Sum_probs=37.1
Q ss_pred EEeeCCChHHHHHHHHHHH---------cCC---eEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 020805 73 LIEPTSGNTGIGLAFMAAA---------KQY---RLIITMPASMSLERRIILRAFGAELVLTDPA 125 (321)
Q Consensus 73 vv~~SsGN~g~AlA~aa~~---------~G~---~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~ 125 (321)
++..++|..+..+|..+.+ .|+ +-.|++|. .-..-.+.++.+|++++.++.+
T Consensus 106 ~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~ 169 (452)
T 2dgk_A 106 GTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMR 169 (452)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCB
T ss_pred eEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecC
Confidence 5666777777666655432 453 24677788 7777778889999999999854
No 480
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=31.87 E-value=1.1e+02 Score=26.69 Aligned_cols=53 Identities=11% Similarity=0.075 Sum_probs=34.6
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEe-cCCCC-HHHHHHHH-HcCCEEEEeC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITM-PASMS-LERRIILR-AFGAELVLTD 123 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivv-p~~~~-~~~~~~~~-~~Ga~v~~~~ 123 (321)
..|||..+|--|.++|......|.+++++. ..... ....+.++ ..|.++..+.
T Consensus 48 ~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~ 103 (328)
T 2qhx_A 48 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQ 103 (328)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEE
Confidence 678888888899999999888999877775 32211 11122333 4576666554
No 481
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=31.78 E-value=47 Score=28.40 Aligned_cols=27 Identities=15% Similarity=0.270 Sum_probs=24.6
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEE
Q 020805 73 LIEPTSGNTGIGLAFMAAAKQYRLIIT 99 (321)
Q Consensus 73 vv~~SsGN~g~AlA~aa~~~G~~~~iv 99 (321)
|+.-.+|..|.+.|..++++|+++++|
T Consensus 9 vvIIG~GpAGl~aA~~l~~~g~~V~li 35 (312)
T 4gcm_A 9 IAIIGAGPAGMTAAVYASRANLKTVMI 35 (312)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEE
Confidence 666788999999999999999999988
No 482
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=31.61 E-value=39 Score=28.80 Aligned_cols=27 Identities=11% Similarity=0.117 Sum_probs=24.6
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEE
Q 020805 73 LIEPTSGNTGIGLAFMAAAKQYRLIIT 99 (321)
Q Consensus 73 vv~~SsGN~g~AlA~aa~~~G~~~~iv 99 (321)
|+.-.+|..|.+.|..++++|+++++|
T Consensus 7 vvIIG~GpAGl~AA~~la~~g~~v~li 33 (314)
T 4a5l_A 7 VVIIGSGPAAHTAAIYLGRSSLKPVMY 33 (314)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCCEEE
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEE
Confidence 666788999999999999999999888
No 483
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=31.60 E-value=80 Score=27.42 Aligned_cols=54 Identities=9% Similarity=0.009 Sum_probs=32.4
Q ss_pred EEEeeCCChHHHHHHHHHHHc---CCeEEEEecCCCCHHHH---HHHHHcCCEEEEeCCC
Q 020805 72 VLIEPTSGNTGIGLAFMAAAK---QYRLIITMPASMSLERR---IILRAFGAELVLTDPA 125 (321)
Q Consensus 72 ~vv~~SsGN~g~AlA~aa~~~---G~~~~ivvp~~~~~~~~---~~~~~~Ga~v~~~~~~ 125 (321)
.++..++|..+..++..+-.. .-.-.|+++...-.... ..++..|++++.++.+
T Consensus 63 ~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 122 (384)
T 1eg5_A 63 EIFFTSCATESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVD 122 (384)
T ss_dssp GEEEESCHHHHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBC
T ss_pred eEEEECCHHHHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccC
Confidence 466677777777766665441 12234555654444332 3347789999988753
No 484
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=31.26 E-value=46 Score=29.61 Aligned_cols=30 Identities=17% Similarity=0.303 Sum_probs=26.3
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 020805 72 VLIEPTSGNTGIGLAFMAAAKQYRLIITMP 101 (321)
Q Consensus 72 ~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp 101 (321)
.|+.-.+|-.|.++|+.+++.|++++|+=.
T Consensus 6 DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~ 35 (397)
T 2oln_A 6 DVVVVGGGPVGLATAWQVAERGHRVLVLER 35 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEeC
Confidence 477789999999999999999999888844
No 485
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=31.25 E-value=1.1e+02 Score=26.90 Aligned_cols=53 Identities=9% Similarity=-0.059 Sum_probs=34.6
Q ss_pred EEEeeCCChHHHHHHHH-HHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 020805 72 VLIEPTSGNTGIGLAFM-AAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 124 (321)
Q Consensus 72 ~vv~~SsGN~g~AlA~a-a~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~ 124 (321)
.|+..++|..+..++.- .+.++-.-.|+++...-..-...++.+|++++.++.
T Consensus 97 ~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~ 150 (397)
T 3fsl_A 97 ATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPW 150 (397)
T ss_dssp EEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECC
T ss_pred EEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEee
Confidence 57777878888777742 222222234555555555567788899999999885
No 486
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=31.10 E-value=62 Score=28.98 Aligned_cols=34 Identities=24% Similarity=0.383 Sum_probs=29.0
Q ss_pred CCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 020805 68 PGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 102 (321)
Q Consensus 68 ~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~ 102 (321)
+| ++|..-.+|..|+.++.+++.+|++++++-|.
T Consensus 13 ~~-k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~ 46 (389)
T 3q2o_A 13 PG-KTIGIIGGGQLGRMMALAAKEMGYKIAVLDPT 46 (389)
T ss_dssp TT-SEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 44 45777888999999999999999999998764
No 487
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=31.05 E-value=2.4e+02 Score=23.80 Aligned_cols=88 Identities=11% Similarity=0.097 Sum_probs=49.2
Q ss_pred eEEEEecCCC--CHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEEcCCCCCCcchhhhhhchHHHHHhhh
Q 020805 95 RLIITMPASM--SLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGS 172 (321)
Q Consensus 95 ~~~ivvp~~~--~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Ei~~ql 172 (321)
+.++|.-..- -..-.+.+...|++|+.+..+.. .+..+...+..++.+......+. |... ......+..++.++.
T Consensus 50 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-Dv~d-~~~v~~~~~~~~~~~ 126 (294)
T 3r3s_A 50 RKALVTGGDSGIGRAAAIAYAREGADVAINYLPAE-EEDAQQVKALIEECGRKAVLLPG-DLSD-ESFARSLVHKAREAL 126 (294)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGG-HHHHHHHHHHHHHTTCCEEECCC-CTTS-HHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcc-hhHHHHHHHHHHHcCCcEEEEEe-cCCC-HHHHHHHHHHHHHHc
Confidence 5566655432 23456677788999998875321 22223333333333233333333 3333 234455566777777
Q ss_pred CCCCCEEEEecCCc
Q 020805 173 GGRIDALVSGIGTG 186 (321)
Q Consensus 173 ~~~~d~vv~p~G~G 186 (321)
+.+|.+|..+|..
T Consensus 127 -g~iD~lv~nAg~~ 139 (294)
T 3r3s_A 127 -GGLDILALVAGKQ 139 (294)
T ss_dssp -TCCCEEEECCCCC
T ss_pred -CCCCEEEECCCCc
Confidence 5799999998853
No 488
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=30.96 E-value=92 Score=27.09 Aligned_cols=41 Identities=7% Similarity=-0.064 Sum_probs=31.3
Q ss_pred HcCCCCCCCeEEEeeCC---ChHHHHHHHHHHHcCCeEEEEecCCC
Q 020805 62 AKGLITPGESVLIEPTS---GNTGIGLAFMAAAKQYRLIITMPASM 104 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~Ss---GN~g~AlA~aa~~~G~~~~ivvp~~~ 104 (321)
+.|.+. | .+|+-... +|.+.|++.+++++|++++++.|+.-
T Consensus 140 ~~g~l~-g-l~va~vGDl~~~rva~Sl~~~~~~~g~~v~~~~P~~~ 183 (291)
T 3d6n_B 140 HFGEVK-D-LRVLYVGDIKHSRVFRSGAPLLNMFGAKIGVCGPKTL 183 (291)
T ss_dssp HHSCCT-T-CEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGG
T ss_pred HhCCcC-C-cEEEEECCCCCCchHHHHHHHHHHCCCEEEEECCchh
Confidence 346543 2 44554444 89999999999999999999999864
No 489
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=30.89 E-value=77 Score=26.59 Aligned_cols=32 Identities=22% Similarity=0.205 Sum_probs=26.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 102 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~ 102 (321)
..+||..+|.-|.++|......|.+++++...
T Consensus 8 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (278)
T 1spx_A 8 VAIITGSSNGIGRATAVLFAREGAKVTITGRH 39 (278)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 67888888999999999988899987776543
No 490
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=30.87 E-value=49 Score=28.46 Aligned_cols=30 Identities=13% Similarity=0.076 Sum_probs=26.3
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 020805 73 LIEPTSGNTGIGLAFMAAAKQYRLIITMPA 102 (321)
Q Consensus 73 vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~ 102 (321)
|+...+|-.|.++|+..++.|++++|+=..
T Consensus 5 V~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~ 34 (336)
T 1yvv_A 5 IAIIGTGIAGLSAAQALTAAGHQVHLFDKS 34 (336)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEECCcHHHHHHHHHHHHCCCcEEEEECC
Confidence 777899999999999999999998888543
No 491
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=30.85 E-value=31 Score=34.70 Aligned_cols=40 Identities=23% Similarity=0.344 Sum_probs=31.5
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 020805 62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 101 (321)
Q Consensus 62 ~~g~~~~g~~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp 101 (321)
+.+.+++|.+.+|...+|.-|.+....|+.+|.++++...
T Consensus 339 ~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~ 378 (795)
T 3slk_A 339 DLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATAS 378 (795)
T ss_dssp CCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECC
T ss_pred HHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeC
Confidence 4466788877667666799999999999999998776543
No 492
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=30.80 E-value=1.1e+02 Score=27.05 Aligned_cols=54 Identities=15% Similarity=0.053 Sum_probs=32.3
Q ss_pred EEEeeCCChHHHHHHHHHHH---cCCeEEEEecCCCCHHHHHHH---HHcCCEEEEeCCC
Q 020805 72 VLIEPTSGNTGIGLAFMAAA---KQYRLIITMPASMSLERRIIL---RAFGAELVLTDPA 125 (321)
Q Consensus 72 ~vv~~SsGN~g~AlA~aa~~---~G~~~~ivvp~~~~~~~~~~~---~~~Ga~v~~~~~~ 125 (321)
.++..++|..+..+|..+-. .+-.-.|+++...-......+ +..|++++.++.+
T Consensus 87 ~v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 146 (423)
T 3lvm_A 87 EIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQ 146 (423)
T ss_dssp GEEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCC
T ss_pred eEEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccC
Confidence 46667777777766665433 122234555554444433333 6679999999854
No 493
>3r2j_A Alpha/beta-hydrolase-like protein; nicotinamidase, cytoplasmic; 2.68A {Leishmania infantum}
Probab=30.74 E-value=2e+02 Score=23.74 Aligned_cols=53 Identities=13% Similarity=0.090 Sum_probs=38.4
Q ss_pred eEEEeeCCChHH-HHHHHHHHHcCCeEEEEecCCC------CHHHHHHHHHcCCEEEEeC
Q 020805 71 SVLIEPTSGNTG-IGLAFMAAAKQYRLIITMPASM------SLERRIILRAFGAELVLTD 123 (321)
Q Consensus 71 ~~vv~~SsGN~g-~AlA~aa~~~G~~~~ivvp~~~------~~~~~~~~~~~Ga~v~~~~ 123 (321)
..+++.-..+.+ .+.|.-+..+|++++|+..... ...-++.|+..|++|+...
T Consensus 159 ~lvv~G~~T~~CV~~Ta~dA~~~Gy~V~Vv~Da~as~~~~~h~~aL~~m~~~g~~v~~s~ 218 (227)
T 3r2j_A 159 RVFVCGVAYDFCVFFTAMDARKNGFSVVLLEDLTAAVDDAAWSARTAELKDAGVVLLKSS 218 (227)
T ss_dssp EEEEEESCTTTHHHHHHHHHHHTTCEEEEEEEEECCSCGGGHHHHHHHHHTTTCEEECGG
T ss_pred EEEEEEeccchHHHHHHHHHHHCCCEEEEEhHhhCCCCHHHHHHHHHHHHHcCCEEEEHH
Confidence 566777778888 5778889999999998865421 1234677888999886543
No 494
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=30.35 E-value=56 Score=28.83 Aligned_cols=32 Identities=19% Similarity=0.178 Sum_probs=27.4
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 102 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~ 102 (321)
..|..-.+|-.|.+.|..++..|++++++=+.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~ 38 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECC
Confidence 45777788999999999999999999998443
No 495
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=30.34 E-value=1.2e+02 Score=22.93 Aligned_cols=49 Identities=12% Similarity=0.094 Sum_probs=25.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAEL 119 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~~Ga~v 119 (321)
+.++.+........+...|...|++.+++.+......-.+.++..|.++
T Consensus 72 Dlvii~vp~~~v~~v~~~~~~~g~~~i~i~~~~~~~~l~~~a~~~Gi~~ 120 (145)
T 2duw_A 72 DMVDVFRNSEAAWGVAQEAIAIGAKTLWLQLGVINEQAAVLAREAGLSV 120 (145)
T ss_dssp SEEECCSCSTHHHHHHHHHHHHTCCEEECCTTCCCHHHHHHHHTTTCEE
T ss_pred CEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCChHHHHHHHHHHHcCCEE
Confidence 3444444445555555555556666665555444444445555555444
No 496
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=30.30 E-value=55 Score=28.98 Aligned_cols=31 Identities=10% Similarity=0.087 Sum_probs=27.4
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 020805 72 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 102 (321)
Q Consensus 72 ~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~ 102 (321)
.|+...+|-.|.++|...++.|++++|+=..
T Consensus 13 dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~ 43 (379)
T 3alj_A 13 RAEVAGGGFAGLTAAIALKQNGWDVRLHEKS 43 (379)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred eEEEECCCHHHHHHHHHHHHCCCCEEEEecC
Confidence 4788899999999999999999999988644
No 497
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=29.88 E-value=1.2e+02 Score=27.01 Aligned_cols=46 Identities=20% Similarity=0.224 Sum_probs=32.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH-cCCEE
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRA-FGAEL 119 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivvp~~~~~~~~~~~~~-~Ga~v 119 (321)
.+|+....|.-|.++|..++.+|.+++++-+ .+.+.+.++. +|+++
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~---~~~~~~~~~~~~g~~~ 213 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDV---NHKRLQYLDDVFGGRV 213 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHTTTSE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEEC---CHHHHHHHHHhcCceE
Confidence 3455555699999999999999997666533 3455555544 77764
No 498
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=29.84 E-value=2.6e+02 Score=23.75 Aligned_cols=43 Identities=14% Similarity=0.183 Sum_probs=28.2
Q ss_pred HHHHHhhhCCCCCEEEEecCCchhHHHHHHHHHhcCC--CcEEEEEe
Q 020805 165 GPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNP--NIKLYGIE 209 (321)
Q Consensus 165 ~~Ei~~ql~~~~d~vv~p~G~Gg~~aGi~~~~k~~~~--~~~vigv~ 209 (321)
..+++++..+.||+||+ .+..++.|+..++++.+- ++.|+|.+
T Consensus 187 ~~~ll~~~~~~~~aI~~--~nd~~A~g~~~al~~~G~~~di~vvg~D 231 (332)
T 2rjo_A 187 MQAWMTRFNSKIKGVWA--ANDDMALGAIEALRAEGLAGQIPVTGMD 231 (332)
T ss_dssp HHHHHHHHGGGEEEEEE--SSHHHHHHHHHHHHHTTCBTTBCEECSB
T ss_pred HHHHHHhcCCCeeEEEE--CCCchHHHHHHHHHHcCCCCCCEEEeec
Confidence 34555541246888886 456678889999988764 45666554
No 499
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=29.83 E-value=79 Score=26.89 Aligned_cols=73 Identities=12% Similarity=0.041 Sum_probs=45.9
Q ss_pred EEEeeCCChH----H-HHHHHHHHHcCCeEEEEe--cCCCCHHHHHHHHHcCCEEEE-eCCCCChhHHHHHHHHHHHhCC
Q 020805 72 VLIEPTSGNT----G-IGLAFMAAAKQYRLIITM--PASMSLERRIILRAFGAELVL-TDPAKGMKGAVQKAEEILAKTP 143 (321)
Q Consensus 72 ~vv~~SsGN~----g-~AlA~aa~~~G~~~~ivv--p~~~~~~~~~~~~~~Ga~v~~-~~~~~~~~~~~~~a~~~~~~~~ 143 (321)
.++..+-=|- | -.++..|+..|+..+|+. |-+....-.+.++.+|-+.++ +.++.+ + ++.+++++..+
T Consensus 90 Pivlm~Y~N~i~~~G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lvaP~t~-~---eRi~~ia~~a~ 165 (252)
T 3tha_A 90 ALVFMVYYNLIFSYGLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVSVTTP-K---ERVKKLVKHAK 165 (252)
T ss_dssp EEEEECCHHHHHHHCHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEEETTSC-H---HHHHHHHTTCC
T ss_pred CEEEEeccCHHHHhhHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCCCCc-H---HHHHHHHHhCC
Confidence 4666666562 3 336677889999998883 434466677788999998876 443322 2 34455555554
Q ss_pred CeEEc
Q 020805 144 NAYML 148 (321)
Q Consensus 144 ~~~~~ 148 (321)
+..|.
T Consensus 166 gFiY~ 170 (252)
T 3tha_A 166 GFIYL 170 (252)
T ss_dssp SCEEE
T ss_pred CeEEE
Confidence 65554
No 500
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=29.83 E-value=39 Score=31.26 Aligned_cols=30 Identities=17% Similarity=0.135 Sum_probs=26.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 020805 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITM 100 (321)
Q Consensus 71 ~~vv~~SsGN~g~AlA~aa~~~G~~~~ivv 100 (321)
+.||.-.+|-.|.+.|+..++.|++++|+=
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlE 31 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLE 31 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEc
Confidence 347778999999999999999999999884
Done!