RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 020805
(321 letters)
>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine
synthase) {Thale cress (Arabidopsis thaliana) [TaxId:
3702]}
Length = 320
Score = 280 bits (717), Expect = 3e-94
Identities = 242/291 (83%), Positives = 265/291 (91%)
Query: 6 SNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGL 65
S IAKDVTELIGNTPLVYLNN+ GCV R+AAKLEMMEPCSSVKDRIG+SMISDAE KGL
Sbjct: 1 SRIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGL 60
Query: 66 ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA 125
I PGESVLIEPTSGNTG+GLAF AAAK Y+LIITMPASMS ERRIIL AFG ELVLTDPA
Sbjct: 61 IKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPA 120
Query: 126 KGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGT 185
KGMKGA+ KAEEILAKTPN YMLQQFENPANPKIHYETTGPE+WKG+GG+ID VSGIGT
Sbjct: 121 KGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGT 180
Query: 186 GGTITGAGKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIIDE 245
GGTITGAGK+LKE+N N+KLYG+EP ES +LSGGKPGPHKIQGIGAGF+P VL V++IDE
Sbjct: 181 GGTITGAGKYLKEQNANVKLYGVEPVESAILSGGKPGPHKIQGIGAGFIPSVLNVDLIDE 240
Query: 246 VVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVV 296
VVQVSSDE+I+ A+ LALKEGL VGISSG AAAAAI++A+RPENAGKL V
Sbjct: 241 VVQVSSDESIDMARQLALKEGLLVGISSGAAAAAAIKLAQRPENAGKLFVA 291
>d1o58a_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine
synthase) {Thermotoga maritima [TaxId: 2336]}
Length = 293
Score = 246 bits (629), Expect = 2e-81
Identities = 146/289 (50%), Positives = 197/289 (68%), Gaps = 9/289 (3%)
Query: 10 KDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPG 69
+ LIG+TP+V L++I +RI KLE P SVKDR MI DAE +GL+ G
Sbjct: 2 HMMERLIGSTPIVRLDSID----SRIFLKLEKNNPGGSVKDRPALFMILDAEKRGLLKNG 57
Query: 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMK 129
++EPTSGN GI +A + A + +R+I+TMP +MS+ERR +L+ GAELVLT GMK
Sbjct: 58 ---IVEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKMLGAELVLTPGELGMK 114
Query: 130 GAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI 189
GAV+KA E +++ A+ML QFENP N H TTGPE+ K +IDA V+G+GTGGTI
Sbjct: 115 GAVEKALE-ISRETGAHMLNQFENPYNVYSHQFTTGPEILKQMDYQIDAFVAGVGTGGTI 173
Query: 190 TGAGKFLKEKNPN-IKLYGIEPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQ 248
+G G+ LK N +K+ +EP +SPVLSGG+PG H IQGIGAGFVP +L+ ++IDEV+
Sbjct: 174 SGVGRVLKGFFGNGVKIVAVEPAKSPVLSGGQPGKHAIQGIGAGFVPKILDRSVIDEVIT 233
Query: 249 VSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVVC 297
V +EA E A+ LA KEGL VGISSG AAA+++A++ +++ V
Sbjct: 234 VEDEEAYEMARYLAKKEGLLVGISSGANVAAALKVAQKLGPDARVVTVA 282
>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine
synthase) {Salmonella typhimurium [TaxId: 90371]}
Length = 302
Score = 234 bits (597), Expect = 2e-76
Identities = 155/300 (51%), Positives = 212/300 (70%), Gaps = 13/300 (4%)
Query: 6 SNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGL 65
S I +D + IG+TPLV LN I N RI AK+E P SVK RIG +MI DAE +G+
Sbjct: 1 SKIYEDNSLTIGHTPLVRLNRIGN---GRILAKVESRNPSFSVKCRIGANMIWDAEKRGV 57
Query: 66 ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA 125
+ PG L+EPT+GNTGI LA++AAA+ Y+L +TMP +MS+ERR +L+A GA LVLT+ A
Sbjct: 58 LKPGV-ELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGA 116
Query: 126 KGMKGAVQKAEEILAKT-PNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIG 184
KGMKGA+QKAEEI+A +LQQF NPANP+IH +TTGPE+W+ + G++D +SG+G
Sbjct: 117 KGMKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVG 176
Query: 185 TGGTITGAGKFLKEKNPN--IKLYGIEPTESPVLSGGK------PGPHKIQGIGAGFVPG 236
TGGT+TG +++K + +EPT+SPV++ PGPHKIQGIGAGF+PG
Sbjct: 177 TGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGFIPG 236
Query: 237 VLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVV 296
L++ +ID+VV ++++EAI TA+ L +EG+ GISSG A AAA+++ + K IVV
Sbjct: 237 NLDLKLIDKVVGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLQEDESFTNKNIVV 296
>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine
synthase) {Haemophilus influenzae [TaxId: 727]}
Length = 310
Score = 230 bits (588), Expect = 6e-75
Identities = 152/297 (51%), Positives = 199/297 (67%), Gaps = 11/297 (3%)
Query: 8 IAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLIT 67
I D + IGNTPLV L + + + K+E P SVK RIG +M+ AE G +T
Sbjct: 2 IYADNSYSIGNTPLVRLKHFGHNG--NVVVKIEGRNPSYSVKCRIGANMVWQAEKDGTLT 59
Query: 68 PGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKG 127
G +++ TSGNTGI LA++AAA+ Y++ +TMP +MSLER+ +L G LVLT+ AKG
Sbjct: 60 KG-KEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKG 118
Query: 128 MKGAVQKAEEILAKTPNA-YMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTG 186
MKGA+ KAEEI+A P+ ML+QFENPANP+IH ETTGPE+WK + G++D +V+G+GTG
Sbjct: 119 MKGAIAKAEEIVASDPSRYVMLKQFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTG 178
Query: 187 GTITGAGKFLKE-KNPNIKLYGIEPTESPVLSGGKPG------PHKIQGIGAGFVPGVLE 239
G+ITG + +K I +EP ESPV+S G PHKIQGIGAGF+P L+
Sbjct: 179 GSITGISRAIKLDFGKQITSVAVEPVESPVISQTLAGEEVKPGPHKIQGIGAGFIPKNLD 238
Query: 240 VNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVV 296
++IID V V SD A+ TA+ L +EG+ GISSG A AAA +AK PE A KLIVV
Sbjct: 239 LSIIDRVETVDSDTALATARRLMAEEGILAGISSGAAVAAADRLAKLPEFADKLIVV 295
>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 355
Score = 222 bits (565), Expect = 6e-71
Identities = 117/304 (38%), Positives = 173/304 (56%), Gaps = 12/304 (3%)
Query: 3 VESSNIAKDVTELIGNTPLVYLNNIVN--GCVARIAAKLEMMEPCSSVKDRIGYSMISDA 60
+S I D+ + IG+TP+V +N I G + AK E SVKDRI MI DA
Sbjct: 29 AKSPKILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDA 88
Query: 61 EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 120
E G + P +IEPTSGNTGIGLA AA + YR II MP MS E+ +LRA GAE+V
Sbjct: 89 ERDGTLKP-GDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIV 147
Query: 121 LTDPAKGM---KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRID 177
T + V A + + PN+++L Q+ N +NP HY+TT E+ + G++D
Sbjct: 148 RTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLD 207
Query: 178 ALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTESPVLSGGK-----PGPHKIQGIGAG 232
LV+ +GTGGTITG + LKEK P ++ G++P S + + ++++GIG
Sbjct: 208 MLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGSILAEPEELNQTEQTTYEVEGIGYD 267
Query: 233 FVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGK 292
F+P VL+ ++D+ + + +EA A++L +EGL G S+G A A++ A+ + G+
Sbjct: 268 FIPTVLDRTVVDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVKAAQELQ-EGQ 326
Query: 293 LIVV 296
VV
Sbjct: 327 RCVV 330
>d1ve1a1 c.79.1.1 (A:1-302) O-acetylserine sulfhydrylase (Cysteine
synthase) {Thermus thermophilus [TaxId: 274]}
Length = 302
Score = 217 bits (552), Expect = 1e-69
Identities = 145/286 (50%), Positives = 200/286 (69%), Gaps = 3/286 (1%)
Query: 12 VTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPG-E 70
V IG TP+V L +V +A + KLE + P S+KDR + MI DAE +G++ PG
Sbjct: 3 VEGAIGKTPVVRLAKVVEPDMAEVWVKLEGLNPGGSIKDRPAWYMIKDAEERGILRPGSG 62
Query: 71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKG 130
V++EPTSGNTGIGLA +AA++ YRLI+TMPA MS ER+ +L+AFGAELVLTDP + M
Sbjct: 63 QVIVEPTSGNTGIGLAMIAASRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPERRMLA 122
Query: 131 AVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTIT 190
A ++A + + A+M QF+NPAN + HYETTGPEL++ GRIDA V G GTGGTIT
Sbjct: 123 AREEALRL-KEELGAFMPDQFKNPANVRAHYETTGPELYEALEGRIDAFVYGSGTGGTIT 181
Query: 191 GAGKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQVS 250
G G++LKE+ P++K+ +EP S VLSGGK G H QG+G GF+P L+++++D V+QV
Sbjct: 182 GVGRYLKERIPHVKVIAVEPARSNVLSGGKMGQHGFQGMGPGFIPENLDLSLLDGVIQVW 241
Query: 251 SDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVV 296
++A A+ LA +EGLF+G+SSGG AA+++A+ GK +
Sbjct: 242 EEDAFPLARRLAREEGLFLGMSSGGIVWAALQVARE-LGPGKRVAC 286
>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine
synthase) {Escherichia coli, isoform B (CysM) [TaxId:
562]}
Length = 292
Score = 190 bits (484), Expect = 1e-59
Identities = 120/285 (42%), Positives = 174/285 (61%), Gaps = 11/285 (3%)
Query: 12 VTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGES 71
+ + IGNTPLV L + + + KLE P SVKDR SMI +AE +G I PG+
Sbjct: 3 LEQTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPGDV 62
Query: 72 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGA 131
+ IE TSGNTGI LA +AA K YR+ + MP +MS ERR +RA+GAEL+L +GM+GA
Sbjct: 63 L-IEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGA 121
Query: 132 VQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITG 191
+ +A +L QF NP NP HY TTGPE+W+ +GGRI VS +GT GTITG
Sbjct: 122 -RDLALEMANRGEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITG 180
Query: 192 AGKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQVSS 251
+F++E++ + + G++P E + G + P ++PG+ +++DEV+ +
Sbjct: 181 VSRFMREQSKPVTIVGLQPEEGSSIPGIRRWPT-------EYLPGIFNASLVDEVLDIHQ 233
Query: 252 DEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVV 296
+A T + LA++EG+F G+SSGGA A A+ +AK N ++V
Sbjct: 234 RDAENTMRELAVREGIFCGVSSGGAVAGALRVAK--ANPDAVVVA 276
>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine
synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}
Length = 382
Score = 182 bits (462), Expect = 3e-55
Identities = 72/291 (24%), Positives = 129/291 (44%), Gaps = 19/291 (6%)
Query: 11 DVTELIGNTPLVYLNNIV-NGCVARIAAKLEMMEPCS-SVKDRIGYSMISDAEAKGLITP 68
D E TPLV + NG R+ KLE P S SVKDR +IS + +
Sbjct: 88 DFFERGKPTPLVRSRLQLPNGV--RVWLKLEWYNPFSLSVKDRPAVEIISRLSRR--VEK 143
Query: 69 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGM 128
G S++ + TS N G+ L+ +A YR + +P + +++ R GA++++ A
Sbjct: 144 G-SLVADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDPEAPST 202
Query: 129 KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK---GSGGRIDALVSGIGT 185
+ + + +K + QF N AN + H T E++ G + + +GT
Sbjct: 203 VHLLPRVMKD-SKNEGFVHVNQFYNDANFEAHMRGTAREIFVQSRRGGLALRGVAGSLGT 261
Query: 186 GGTITGAGKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIIDE 245
G ++ A +L+ +P+I+ ++P + + G + + I ++I
Sbjct: 262 SGHMSAAAFYLQSVDPSIRAVLVQPAQGDSIPGIRRVETGMLWINM--------LDISYT 313
Query: 246 VVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVV 296
+ +V+ +EA+E +A +GL +G S G A A + A + VV
Sbjct: 314 LAEVTLEEAMEAVVEVARSDGLVIGPSGGAAVKALAKKAAEGDLEPGDYVV 364
>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli
[TaxId: 562]}
Length = 331
Score = 156 bits (395), Expect = 5e-46
Identities = 60/297 (20%), Positives = 105/297 (35%), Gaps = 21/297 (7%)
Query: 12 VTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGES 71
V E TPL + + + I K E +P S K R Y+M++ +
Sbjct: 21 VYEAAQVTPLQKMEKLSSRLDNVILVKREDRQPVHSFKLRGAYAMMAGLTEEQ----KAH 76
Query: 72 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGA 131
+I ++GN G+AF +A + +I MP + + + +R FG E++L A
Sbjct: 77 GVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKA 136
Query: 132 VQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITG 191
L++ + F++P I + T +D + +G GG G
Sbjct: 137 KA---IELSQQQGFTWVPPFDHP--MVIAGQGTLALELLQQDAHLDRVFVPVGGGGLAAG 191
Query: 192 AGKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQ---------GIGAGFVPGV---LE 239
+K+ P IK+ +E +S L H + G+ + L
Sbjct: 192 VAVLIKQLMPQIKVIAVEAEDSACLKAALDAGHPVDLPRVGLFAEGVAVKRIGDETFRLC 251
Query: 240 VNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVV 296
+D+++ V SD K L S A A + G+ +
Sbjct: 252 QEYLDDIITVDSDAICAAMKDLFEDVRAVAEPSGALALAGMKKYIALHNIRGERLAH 308
>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14
(SPCC320.14, SPCC330.15c) {Fission yeast
(Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 318
Score = 144 bits (364), Expect = 2e-41
Identities = 55/301 (18%), Positives = 120/301 (39%), Gaps = 21/301 (6%)
Query: 9 AKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITP 68
++ + + TP++ + + VA + K E + + K R + +S
Sbjct: 12 SERIKKFANKTPVLTSSTVNKEFVAEVFFKCENFQKMGAFKFRGALNALSQLNEA----Q 67
Query: 69 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGM 128
++ ++ +SGN +A A I MP + + +G ++++ D K
Sbjct: 68 RKAGVLTFSSGNHAQAIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMYDRYKDD 127
Query: 129 KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGT 188
+ + K +++ ++ +++P + T EL++ G +DAL +G GG
Sbjct: 128 REKMAKE---ISEREGLTIIPPYDHP-HVLAGQGTAAKELFE-EVGPLDALFVCLGGGGL 182
Query: 189 ITGAGKFLKEKNPNIKLYGIEPTESPVLS------------GGKPGPHKIQGIGAGFVPG 236
++G+ + PN ++YG+EP K Q G
Sbjct: 183 LSGSALAARHFAPNCEVYGVEPEAGNDGQQSFRKGSIVHIDTPKTIADGAQTQHLGNYTF 242
Query: 237 VLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVV 296
+ +D+++ VS +E I+ K A + + V + + AAA + ++ +N I++
Sbjct: 243 SIIKEKVDDILTVSDEELIDCLKFYAARMKIVVEPTGCLSFAAARAMKEKLKNKRIGIII 302
Query: 297 C 297
Sbjct: 303 S 303
>d1tyza_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase
{Pseudomonas sp., strain ACP [TaxId: 306]}
Length = 338
Score = 132 bits (332), Expect = 1e-36
Identities = 50/314 (15%), Positives = 95/314 (30%), Gaps = 32/314 (10%)
Query: 12 VTELIGNTPLVYLNNIVN--GCVARIAAKLEMMEPCSSV---KDRIGYSMISDAEAKGLI 66
G TP+ L + G + AK E + K R +I +A A+G
Sbjct: 9 YPLTFGPTPIQPLARLSKHLGGKVHLYAKREDCNSGLAFGGNKTRKLEYLIPEALAQGCD 68
Query: 67 TPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAEL------- 119
T V I N +A +AA + ++ ++ + R ++
Sbjct: 69 TL---VSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQMSRILGAD 125
Query: 120 ---VLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELW-----KG 171
V G + + + A E + +P G
Sbjct: 126 VRLVPDGFDIGFRRSWEDALESVRAAGGKPYAIPAGCSDHPLGGLGFVGFAEEVRAQEAE 185
Query: 172 SGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGIGA 231
G + D +V TG T G ++ G++ + P + + Q
Sbjct: 186 LGFKFDYVVVCSVTGSTQAGMVVGFAADGRADRVIGVDASAKPAQTREQITRIARQTAEK 245
Query: 232 GFVPG-------VLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVG-ISSGGAAAAAIEI 283
+ VL+ + ++ +E +L A EG+ + G + IE+
Sbjct: 246 VGLERDIMRADVVLDERFAGPEYGLPNEGTLEAIRLCARTEGMLTDPVYEGKSMHGMIEM 305
Query: 284 AKRPE-NAGKLIVV 296
+ E G ++
Sbjct: 306 VRNGEFPEGSRVLY 319
>d1ve5a1 c.79.1.1 (A:2-311) Threonine deaminase {Thermus
thermophilus [TaxId: 274]}
Length = 310
Score = 127 bits (320), Expect = 4e-35
Identities = 55/303 (18%), Positives = 110/303 (36%), Gaps = 28/303 (9%)
Query: 9 AKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITP 68
+ + TPL+ + R+ K E ++ S K R S E
Sbjct: 10 FRRIAPYTHRTPLLTSRLLDGLLGKRLLLKAEHLQKTGSFKARGALSKALALE------- 62
Query: 69 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGM 128
L+ +SGN G+A+ A + ++ MP S ++ RA+GAE+V
Sbjct: 63 NPKGLLAVSSGNHAQGVAYAAQVLGVKALVVMPEDASPYKKACARAYGAEVVDRGVTAKN 122
Query: 129 KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELW--KGSGGRIDALVSGIGTG 186
+ V +A + + ++ F++P L G A+++ +G G
Sbjct: 123 REEVARALQ---EETGYALIHPFDDPLVIAGQGTAGLELLAQAGRMGVFPGAVLAPVGGG 179
Query: 187 GTITGAGKFLKEKNPNIKLYGIEPTESP-------------VLSGGKPGPHKIQGIGAGF 233
G + G +K +P + G+EP + + + + ++ + G
Sbjct: 180 GLLAGLATAVKALSPTTLVLGVEPEAADDAKRSLEAGRILRLEAPPRTRADGVRTLSLGE 239
Query: 234 VPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKL 293
+ +D ++ VS + +E +LL + V + AA +E R +
Sbjct: 240 RTFPILRERVDGILTVSEEALLEAERLLFTRTKQVVEPTGALPLAAVLEHGARL---PQT 296
Query: 294 IVV 296
+ +
Sbjct: 297 LAL 299
>d1j0aa_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase
{Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Length = 325
Score = 122 bits (306), Expect = 5e-33
Identities = 53/295 (17%), Positives = 100/295 (33%), Gaps = 14/295 (4%)
Query: 12 VTELIGNTPLVYLNNIVNGCVARIAAKLEMM--EPCSSVKDRIGYSMISDAEAKGLITPG 69
V + TP+ YL NI A + K + + K R ++ DA +KG
Sbjct: 15 VELIPWETPIQYLPNISREIGADVYIKRDDLTGLGIGGNKIRKLEYLLGDALSKGADVV- 73
Query: 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMK 129
+ + N A I+ + L+ +L AK
Sbjct: 74 --ITVGAVHSNHAFVTGLAAKKLGLDAILVLRGKEELKGNYLLDKIMGIETRVYDAKDSF 131
Query: 130 GAVQKAEEIL----AKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGT 185
++ AEEI + Y++ + Y E+ S + D++V G+
Sbjct: 132 ELMKYAEEIAEELKREGRKPYVIPPGGASPIGTLGYVRAVGEIATQSEVKFDSIVVAAGS 191
Query: 186 GGTITGAGKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGI---GAGFVPGVLEVNI 242
GGT+ G L N +I+ GI + K + G +
Sbjct: 192 GGTLAGLSLGLSILNEDIRPVGIAVGRFGEVMTSKLDNLIKEAAELLGVKVEVRPELYDY 251
Query: 243 IDEVVQVSSDEAIETAKLLALKEGLFVG-ISSGGAAAAAIEIAKRPENAGKLIVV 296
+ E + + + +EG+ + + +G A +++A++ E G+ I+
Sbjct: 252 SFGEYGKITGEVAQIIRKVGTREGIILDPVYTGKAFYGLVDLARKGE-LGEKILF 305
>d1f2da_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase
{Yeast (Hansenula saturnus) [TaxId: 4906]}
Length = 341
Score = 120 bits (302), Expect = 2e-32
Identities = 43/315 (13%), Positives = 85/315 (26%), Gaps = 33/315 (10%)
Query: 12 VTELIGNTPLVYLNNIVN--GCVARIAAKLEMMEPCSSV---KDRIGYSMISDAEAKGLI 66
G +P+ LN + G + AK E + K R ++ D
Sbjct: 9 YPLTFGPSPISNLNRLSQHLGSKVNVYAKREDCNSGLAFGGNKLRKLEYIVPDIVEGDYT 68
Query: 67 TPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAK 126
V I N +A +AA + ++ + + +
Sbjct: 69 HL---VSIGGRQSNQTRMVAALAAKLGKKCVLIQEDWVPIPEAEKDVYNRVGNIELSRIM 125
Query: 127 G-------------MKGAVQKAEEILAKTPNAYMLQQFENPANPKIH-----YETTGPEL 168
G M+ + A + L + + +
Sbjct: 126 GADVRVIEDGFDIGMRKSFANALQELEDAGHKPYPIPAGCSEHKYGGLGFVGFADEVINQ 185
Query: 169 WKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTES-----PVLSGGKPGP 223
G + D +V TG T G + + + I+ + +
Sbjct: 186 EVELGIKFDKIVVCCVTGSTTAGILAGMAQYGRQDDVIAIDASFTSEKTKEQTLRIANNT 245
Query: 224 HKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVG-ISSGGAAAAAIE 282
K+ G+ F L+ V ++ IE + A +EG+ + G + I
Sbjct: 246 AKLIGVEHEFKDFTLDTRFAYPCYGVPNEGTIEAIRTCAEQEGVLTDPVYEGKSMQGLIA 305
Query: 283 IAKRPE-NAGKLIVV 296
+ K G ++
Sbjct: 306 LIKEDYFKPGANVLY 320
>d1v8za1 c.79.1.1 (A:1-386) Tryptophan synthase, beta-subunit
{Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 386
Score = 119 bits (300), Expect = 9e-32
Identities = 58/324 (17%), Positives = 110/324 (33%), Gaps = 50/324 (15%)
Query: 19 TPLVYLNNIVNGC-VARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPT 77
TPL Y + A+I K E + + K A+ G ++ E
Sbjct: 51 TPLYYAKRLTEKIGGAKIYLKREDLVHGGAHKTNNAIGQALLAKFMGKTR----LIAETG 106
Query: 78 SGNTGIGLAFMAAAKQYRLIITMPA---SMSLERRIILRAFGAELVLTDP-AKGMKGAVQ 133
+G G+ A A ++ I M A ++ GA ++ + ++ +K A+
Sbjct: 107 AGQHGVATAMAGALLGMKVDIYMGAEDVERQKMNVFRMKLLGANVIPVNSGSRTLKDAIN 166
Query: 134 KAEEILAKTP------NAYMLQQFENPANPKIHYETTGPEL---WKGSGGRIDALVSGIG 184
+A T ++ P + G E + G++ ++
Sbjct: 167 EALRDWVATFEYTHYLIGSVVGPHPYPTIVRDFQSVIGREAKAQILEAEGQLPDVIVACV 226
Query: 185 TGGTITGAGKFLKEKNPNIKLYGIEPTESPVLSG--------GKPGP------------- 223
GG+ + + +KL G+E + SG G+ G
Sbjct: 227 GGGSNAMGIFYPFVNDKKVKLVGVEAGGKGLESGKHSASLNAGQVGVFHGMLSYFLQDEE 286
Query: 224 ----------HKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISS 273
+ G G L+ E V V+ +EA++ L+ EG+ + S
Sbjct: 287 GQIKPTHSIAPGLDYPGVGPEHAYLKKIQRAEYVTVTDEEALKAFHELSRTEGIIPALES 346
Query: 274 GGAAAAAIEIAKRPENAGKLIVVC 297
A A A+++AK + ++I+V
Sbjct: 347 AHAVAYAMKLAKE-MSRDEIIIVN 369
>d1qopb_ c.79.1.1 (B:) Tryptophan synthase, beta-subunit {Salmonella
typhimurium [TaxId: 90371]}
Length = 390
Score = 109 bits (272), Expect = 1e-27
Identities = 58/323 (17%), Positives = 97/323 (30%), Gaps = 48/323 (14%)
Query: 19 TPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTS 78
T L NI G + K E + + K A+ G E +
Sbjct: 56 TALTKCQNITAGTRTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGKSEII----AETGA 111
Query: 79 GNTGIGLAFMAAAKQYRLIITMPASM---SLERRIILRAFGAELVLTDP-AKGMKGAVQK 134
G G+ A +A + I M A +R GAE++ + +K A +
Sbjct: 112 GQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSATLKDACNE 171
Query: 135 AEEILAKTP------NAYMLQQFENPANPKIHYETTGPEL---WKGSGGRIDALVSGIGT 185
A + + P + G E GR+ V
Sbjct: 172 ALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQILDKEGRLPDAVIACVG 231
Query: 186 GGTITGAGKFLKEKNPNIKLYGIEPTESPVLSG--------GKPG--------------- 222
GG+ + ++ L G+EP + +G G+ G
Sbjct: 232 GGSNAIGMFADFINDTSVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTADG 291
Query: 223 --------PHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSG 274
+ G L + V ++ DEA+E K L EG+ + S
Sbjct: 292 QIEESYSISAGLDFPSVGPQHAYLNSIGRADYVSITDDEALEAFKTLCRHEGIIPALESS 351
Query: 275 GAAAAAIEIAKRPENAGKLIVVC 297
A A A+++ + +L+VV
Sbjct: 352 HALAHALKMMREQPEKEQLLVVN 374
>d1e5xa_ c.79.1.1 (A:) Threonine synthase {Mouse-ear cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 477
Score = 108 bits (271), Expect = 3e-27
Identities = 42/309 (13%), Positives = 87/309 (28%), Gaps = 26/309 (8%)
Query: 12 VTELIGNTPLVYLNNIVN--GCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPG 69
V+ GN+ L + + + K + S KD ++S +
Sbjct: 115 VSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRP 174
Query: 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMK 129
+ ++G+T L+ A+ I+ +PA+ +++ +
Sbjct: 175 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKI-SMAQLVQPIANGAFVLSIDTDFD 233
Query: 130 GAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI 189
G ++ EI L N + L + D ++ G G I
Sbjct: 234 GCMKLIREI--TAELPIYLANSLNSLRLEGQKTAAIEILQQFDWQVPDWVIVPGGNLGNI 291
Query: 190 TGAGKFLKEKN--------PNIKLYGIEPTESPVLSG--------GKPGPHKIQGIGAGF 233
K K P + L
Sbjct: 292 YAFYKGFKMCQELGLVDRIPRMVCAQAANANPLYLHYKSGWKDFKPMTASTTFASAIQIG 351
Query: 234 VPGVLE-----VNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPE 288
P ++ + + +V+ +++E + A A G+F+ +G A A ++ +
Sbjct: 352 DPVSIDRAVYALKKCNGIVEEATEEELMDAMAQADSTGMFICPHTGVALTALFKLRNQGV 411
Query: 289 NAGKLIVVC 297
A V
Sbjct: 412 IAPTDRTVV 420
>d1v7ca_ c.79.1.1 (A:) Threonine synthase {Thermus thermophilus
[TaxId: 274]}
Length = 351
Score = 102 bits (253), Expect = 2e-25
Identities = 52/302 (17%), Positives = 92/302 (30%), Gaps = 25/302 (8%)
Query: 12 VTELIGNTPLVYLNNIV--NGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPG 69
++ L G+TPL+ L R+ AK E + P S KDR +S A G
Sbjct: 22 ISLLEGSTPLIPLKGPEEARKKGIRLYAKYEGLNPTGSFKDRGMTLAVSKAVEGGAQAV- 80
Query: 70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMK 129
++GNT A AA I+ +PA ++ ++
Sbjct: 81 ----ACASTGNTAASAAAYAARAGILAIVVLPAGYVALGKVAQSLVHGARIVQVEGNFDD 136
Query: 130 GAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI 189
+ + + +T E+ G +G G I
Sbjct: 137 ALRLTQKLT----EAFPVALVNSVNPHRLEGQKTLAFEVVDELGDAPHYHALPVGNAGNI 192
Query: 190 TGAGKFLKEK------NPNIKLYGIEPTESPVLSGGKPGPHK--------IQGIGAGFVP 235
T K ++ G + + L G+P I +
Sbjct: 193 TAHWMGYKAYHALGKAKRLPRMLGFQAAGAAPLVLGRPVERPETLATAIRIGNPASWQGA 252
Query: 236 GVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIV 295
+ + V+ +E + + LA +EG+F +S A A ++ + + V
Sbjct: 253 VRAKEESGGVIEAVTDEEILFAYRYLAREEGIFCEPASAAAMAGVFKLLREGRLEPESTV 312
Query: 296 VC 297
V
Sbjct: 313 VL 314
>d1p5ja_ c.79.1.1 (A:) L-serine dehydratase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 319
Score = 98.7 bits (244), Expect = 3e-24
Identities = 41/302 (13%), Positives = 79/302 (26%), Gaps = 26/302 (8%)
Query: 15 LIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLI 74
L TP+ + + K++ +P S K R +G +
Sbjct: 4 LHVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWAKQGCAH-----FV 58
Query: 75 EPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQK 134
++GN G+ A+ A I +P + L+ GA + +
Sbjct: 59 CSSAGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGATCKVVGELLDEAF--EL 116
Query: 135 AEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGK 194
A+ + P + F++P + H +S G G
Sbjct: 117 AKALAKNNPGWVYIPPFDDPLIWEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQG 176
Query: 195 FLKEKNPNIKLYG------------IEPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNI 242
+ ++ + + L + G L
Sbjct: 177 LQECGWGDVPVIAMETFGAHSFHAATTAGKLVSLPKITSVAKALGVKTVGSQALKLFQEH 236
Query: 243 IDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAI-------EIAKRPENAGKLIV 295
+S EA+ + E + V + G A AA ++ +V
Sbjct: 237 PIFSEVISDQEAVAAIEKFVDDEKILVEPACGAALAAVYSHVIQKLQLEGNLRTPLPSLV 296
Query: 296 VC 297
V
Sbjct: 297 VI 298
>d1xvha1 a.8.1.2 (A:3-72) Ebh protein {Staphylococcus aureus [TaxId:
1280]}
Length = 70
Score = 27.0 bits (60), Expect = 0.80
Identities = 7/20 (35%), Positives = 8/20 (40%)
Query: 131 AVQKAEEILAKTPNAYMLQQ 150
AV AE IL K +
Sbjct: 35 AVSAAETILNKQTGPNTAKT 54
>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo
sapiens), different isozymes [TaxId: 9606]}
Length = 176
Score = 27.6 bits (60), Expect = 1.6
Identities = 10/64 (15%), Positives = 20/64 (31%), Gaps = 6/64 (9%)
Query: 53 GYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIIL 112
GY + + PG + G + A R+I ++ ++
Sbjct: 16 GYGAAVNT---AKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVD---INKDKFARA 69
Query: 113 RAFG 116
+ FG
Sbjct: 70 KEFG 73
>d1nbwb_ c.51.3.2 (B:) Glycerol dehydratase reactivase, beta subunit
{Klebsiella pneumoniae [TaxId: 573]}
Length = 113
Score = 26.3 bits (58), Expect = 2.2
Identities = 13/56 (23%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Query: 236 GVLEVNIIDEVVQVS-SDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENA 290
G+ E + + + +A L A L VGI + A+ A+ P +A
Sbjct: 24 GLEEQGVPCQTITYDGGGDAAALGALAARSSPLRVGIGLSASGEIALTHAQLPADA 79
>d1jx4a2 e.8.1.7 (A:1-240) DinB homolog (DBH) {Archaeon Sulfolobus
solfataricus, DNA polymerase IV [TaxId: 2287]}
Length = 240
Score = 27.2 bits (59), Expect = 2.3
Identities = 8/33 (24%), Positives = 11/33 (33%)
Query: 279 AAIEIAKRPENAGKLIVVCSQFACITSDSWLIA 311
A +E P GK +VVC +
Sbjct: 13 AQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVAT 45
>d1kmma2 d.104.1.1 (A:4-325) Histidyl-tRNA synthetase (HisRS)
{Escherichia coli [TaxId: 562]}
Length = 322
Score = 26.9 bits (58), Expect = 3.5
Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 10/43 (23%)
Query: 171 GSGGRIDALVSGIGTGGTITGAG---------KFLKEKNPNIK 204
+GGR D LV +G G G ++ NP K
Sbjct: 280 CAGGRYDGLVEQLG-GRATPAVGFAMGLERLVLLVQAVNPEFK 321
>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus
subtilis [TaxId: 1423]}
Length = 167
Score = 26.5 bits (57), Expect = 3.6
Identities = 12/54 (22%), Positives = 20/54 (37%)
Query: 61 EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRA 114
E GL SVL+ +G G M + Y ++ + + + L A
Sbjct: 16 EQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGA 69
>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus
callarias) [TaxId: 8053]}
Length = 175
Score = 26.5 bits (57), Expect = 3.6
Identities = 8/57 (14%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
Query: 64 GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 120
+ PG + + + +A R+I ++ ++ + FGA
Sbjct: 24 AKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVD---LNPDKFEKAKVFGATDF 77
>d2nrka1 d.218.1.14 (A:4-170) Hypothetical protein GrpB
{Enterococcus faecalis [TaxId: 1351]}
Length = 167
Score = 26.1 bits (57), Expect = 3.9
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 225 KIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLF 268
K++ IG+ VP + IID +V V E ++ + + G
Sbjct: 30 KVEHIGSTSVPNLAAKPIIDFLVIVEEIEKVDLLQWEFERIGYE 73
>d1wiwa_ c.80.1.1 (A:) Glucose-6-phosphate isomerase-like protein
TTHA1346 {Thermus thermophilus [TaxId: 274]}
Length = 284
Score = 26.8 bits (59), Expect = 4.0
Identities = 15/84 (17%), Positives = 26/84 (30%), Gaps = 8/84 (9%)
Query: 211 TESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGL-FV 269
PV PGPH G G G +L + + + + +E L G+ +
Sbjct: 26 GTGPVPGEAYPGPHAALGYGEGQFAALLSG--LPDWGEEGTLFLLEGGYDLGEAAGMALL 83
Query: 270 GISSGG-----AAAAAIEIAKRPE 288
+ +E+ P
Sbjct: 84 AETGRARVVRVGFRPGVEVHIPPS 107
>d1ag9a_ c.23.5.1 (A:) Flavodoxin {Escherichia coli [TaxId: 562]}
Length = 175
Score = 25.8 bits (56), Expect = 5.2
Identities = 8/52 (15%), Positives = 20/52 (38%)
Query: 266 GLFVGISSGGAAAAAIEIAKRPENAGKLIVVCSQFACITSDSWLIAITCMSF 317
G+F G +G A I K+ + ++ + +++ I + +
Sbjct: 4 GIFFGSDTGNTENIAKMIQKQLGKDVADVHDIAKSSKEDLEAYDILLLGIPT 55
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release
factor ERF2, G domain {Fission yeast
(Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 245
Score = 26.0 bits (56), Expect = 6.5
Identities = 8/65 (12%), Positives = 13/65 (20%)
Query: 21 LVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGN 80
L I + V ++ + V P S
Sbjct: 156 LARTQGINHLVVVINKMDEPSVQWSEERYKECVDKLSMFLRRVAGYNSKTDVKYMPVSAY 215
Query: 81 TGIGL 85
TG +
Sbjct: 216 TGQNV 220
>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus
musculus), class II [TaxId: 10090]}
Length = 174
Score = 25.3 bits (54), Expect = 9.3
Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 3/54 (5%)
Query: 63 KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFG 116
+TPG + + G +GL+ + K + ++ E+ +A G
Sbjct: 23 TAKVTPGSTCAV---FGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALG 73
>d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus
versutus) [TaxId: 34007]}
Length = 106
Score = 24.6 bits (53), Expect = 9.4
Identities = 12/90 (13%), Positives = 23/90 (25%), Gaps = 3/90 (3%)
Query: 210 PTESPVLSGGKP-GPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLF 268
+E PV + P + ++ + + + V V+ + G
Sbjct: 7 TSEKPVAAADVPADAVVVGIEKMKYLTPEVTIKAGETVYWVNGEVMPHNVAFKKGIVG-- 64
Query: 269 VGISSGGAAAAAIEIAKRPENAGKLIVVCS 298
G A AG C+
Sbjct: 65 EDAFRGEMMTKDQAYAITFNEAGSYDYFCT 94
>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol
dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}
Length = 174
Score = 25.3 bits (54), Expect = 9.6
Identities = 11/51 (21%), Positives = 18/51 (35%), Gaps = 3/51 (5%)
Query: 66 ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFG 116
I G SV++ G +GL +A AK + + +G
Sbjct: 25 IEMGSSVVV---IGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYG 72
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.134 0.383
Gapped
Lambda K H
0.267 0.0686 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,174,573
Number of extensions: 56123
Number of successful extensions: 259
Number of sequences better than 10.0: 1
Number of HSP's gapped: 215
Number of HSP's successfully gapped: 42
Length of query: 321
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 236
Effective length of database: 1,240,546
Effective search space: 292768856
Effective search space used: 292768856
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (24.3 bits)