BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020809
(321 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LRK8|HDA18_ARATH Histone deacetylase 18 OS=Arabidopsis thaliana GN=HDA18 PE=2 SV=1
Length = 682
Score = 38.5 bits (88), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 88/178 (49%), Gaps = 30/178 (16%)
Query: 46 ELDQLKSKIRSLESHIDEKTQELKGKDEVVAQKEK-------AIQDKSERIVSLQKELSS 98
E+++LKS + + + ++ + +ELK K++ + EK I+ + + I L ++ S
Sbjct: 442 EVEELKSLMAARDGELEARRKELKAKNKELEANEKELEAGLMLIRAREDVICGLHAKIES 501
Query: 99 LQ--KKETLNAAEQVDKA----HARADEL-------------EKQIDNLKKESEKQQKEK 139
LQ + E + AE++DK AR+ E EK++ + K + + KEK
Sbjct: 502 LQQERDEAVAKAERIDKELQEDRARSQEFKEDTEFCLSTLRREKELAIMAKNKDLEAKEK 561
Query: 140 EALEARAIEAEKKISDLSAKLEKLQKINDEQKSKIRKTERALKVAEEEMMRAKFEATS 197
E LEAR + + + AK+E+LQ+ DE + K ER K +E+ R++ S
Sbjct: 562 E-LEARLMLVHAREDKIHAKIERLQQERDEA---VAKAERIDKELQEDRSRSRVGNGS 615
>sp|P15924|DESP_HUMAN Desmoplakin OS=Homo sapiens GN=DSP PE=1 SV=3
Length = 2871
Score = 35.8 bits (81), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 95/196 (48%), Gaps = 25/196 (12%)
Query: 20 ADVSIQGEDVPPLTASDAVDSSPLKIELDQLKSKIRSLESHI-------DEKTQELKGKD 72
+++I + LT D+S + ++D L + RSL I + T+ L+ +
Sbjct: 1368 TEINITKTTIHQLTMQKEEDTSGYRAQIDNLTRENRSLSEEIKRLKNTLTQTTENLRRVE 1427
Query: 73 EVVAQKEKAIQDKSERIVSLQKEL---SSLQKKETLNAAEQVDKAHARADELEKQIDNLK 129
E + Q++ + S+R L+ EL + ++ +E++ + +D A + K+I+ LK
Sbjct: 1428 EDIQQQKATGSEVSQRKQQLEVELRQVTQMRTEESVRYKQSLDDAAKTIQDKNKEIERLK 1487
Query: 130 KESEKQQKEKEALEARAIEAEKKISDLSAKLEKLQKINDEQKSKIRKTE--RALKVAEEE 187
+ +K+ +++ LE D +A+L+++Q D QK+ TE LKV E+E
Sbjct: 1488 QLIDKETNDRKCLE-----------DENARLQRVQY--DLQKANSSATETINKLKVQEQE 1534
Query: 188 MMRAKFEATSRSKELT 203
+ R + + S+E T
Sbjct: 1535 LTRLRIDYERVSQERT 1550
>sp|A7YH32|CING_CANFA Cingulin OS=Canis familiaris GN=CGN PE=2 SV=1
Length = 1190
Score = 35.8 bits (81), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 95/179 (53%), Gaps = 20/179 (11%)
Query: 46 ELDQLKSKIRSLESHIDEK--TQEL------KGKDEVVAQKEKAIQDKSERI------VS 91
+L L+ K+ LE+ +DE+ T EL +G+D+V + + +Q++S R +S
Sbjct: 951 QLKGLEEKVSRLEAELDEERSTVELLTERVTRGRDQVDQLRSELMQERSARQDLECDKIS 1010
Query: 92 LQKELSSLQKKETLNAAEQVDKAHARADELEKQIDNLKKESEKQQKEKEALEARAIEAEK 151
L+++ L K L ++E K A +LE Q L++ + +++EK L++ + E+
Sbjct: 1011 LERQNKDL--KSRLASSEGFQKPSASLSQLESQNQELQERLQAEEREKTVLQSTNRKLER 1068
Query: 152 KISDLSAKL-EKLQKINDEQKS---KIRKTERALKVAEEEMMRAKFEATSRSKELTEVH 206
++ +LS ++ ++ Q +ND++ +++ +R + AEEE+ R +EL E H
Sbjct: 1069 RVKELSIQIDDERQHVNDQKDQLSLRVKALKRQVDEAEEEIERLDGLRKKAQRELEEQH 1127
>sp|A9X1A5|CING_PAPAN Cingulin OS=Papio anubis GN=CGN PE=3 SV=1
Length = 1197
Score = 35.8 bits (81), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 94/179 (52%), Gaps = 20/179 (11%)
Query: 46 ELDQLKSKIRSLESHIDE--KTQEL------KGKDEVVAQKEKAIQDKSERI------VS 91
+L L+ K+ LE+ +DE T EL +G+D+V + + +Q++S R +S
Sbjct: 957 QLKGLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELLQERSARQDLECDKIS 1016
Query: 92 LQKELSSLQKKETLNAAEQVDKAHARADELEKQIDNLKKESEKQQKEKEALEARAIEAEK 151
L+++ L K L ++E K A +LE Q L++ + +++EK L++ + E+
Sbjct: 1017 LERQNKDL--KTRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLER 1074
Query: 152 KISDLSAKLE-KLQKINDEQKS---KIRKTERALKVAEEEMMRAKFEATSRSKELTEVH 206
K+ +LS ++E + Q +ND++ +++ +R + AEEE+ R +EL E H
Sbjct: 1075 KVKELSIQIEDERQHVNDQKDQLSLRVKALKRQVDEAEEEIERLDGLRKKAQRELEEQH 1133
>sp|B0KWC9|CING_CALJA Cingulin OS=Callithrix jacchus GN=CGN PE=3 SV=2
Length = 1198
Score = 35.8 bits (81), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 94/179 (52%), Gaps = 20/179 (11%)
Query: 46 ELDQLKSKIRSLESHIDE--KTQEL------KGKDEVVAQKEKAIQDKSERI------VS 91
+L L+ K+ LE+ +DE T EL +G+D+V + + +Q++S R +S
Sbjct: 958 QLKGLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKIS 1017
Query: 92 LQKELSSLQKKETLNAAEQVDKAHARADELEKQIDNLKKESEKQQKEKEALEARAIEAEK 151
L+++ L K L ++E K A +LE Q L++ + +++EK L++ + E+
Sbjct: 1018 LERQNKDL--KTRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLER 1075
Query: 152 KISDLSAKLE-KLQKINDEQKS---KIRKTERALKVAEEEMMRAKFEATSRSKELTEVH 206
K+ +LS ++E + Q +ND++ +++ +R + AEEE+ R +EL E H
Sbjct: 1076 KVKELSIQIEDERQHVNDQKDQLSLRVKALKRQVDEAEEEIERLDGLRKKAQRELEEQH 1134
>sp|E9Q557|DESP_MOUSE Desmoplakin OS=Mus musculus GN=Dsp PE=3 SV=1
Length = 2883
Score = 35.4 bits (80), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 101/208 (48%), Gaps = 32/208 (15%)
Query: 20 ADVSIQGEDVPPLTASDAVDSSPLKIELDQLKSKIRSL-------ESHIDEKTQELKGKD 72
+++I + LT D+S + ++D L + RSL ++ + + T+ L+ +
Sbjct: 1380 TEINITKTTIHQLTMQKEEDTSGYRAQIDNLTRENRSLCEEVKRLKNTLAQTTENLRRVE 1439
Query: 73 EVVAQKEKAIQDKSERIVSLQKEL---SSLQKKETLNAAEQVDKAHARADELEKQIDNLK 129
E Q++ + S+R L+ EL + ++ +E++ + +D A + K+I+ LK
Sbjct: 1440 ENAQQQKATGSEMSQRKQQLEIELRQVTQMRTEESMRYKQSLDDAAKTIQDKNKEIERLK 1499
Query: 130 KESEKQQKEKEALEARAIEAEKKISDLSAKLEKLQKINDEQKSKIRKTE--RALKVAEEE 187
+ +K+ E++ LE D ++KL+++Q D QK+ TE LKV E+E
Sbjct: 1500 QLVDKETNERKCLE-----------DENSKLQRVQY--DLQKANNSATEAMSKLKVQEQE 1546
Query: 188 MMRAKF-------EATSRSKELTEVHSA 208
+ R + E T + +++T + S+
Sbjct: 1547 LTRLRIDYERVSQERTVKDQDITRIQSS 1574
>sp|P24733|MYS_ARGIR Myosin heavy chain, striated muscle OS=Argopecten irradians PE=1 SV=1
Length = 1938
Score = 35.4 bits (80), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 23/160 (14%)
Query: 49 QLKSKIRSLESHIDEKTQELKGKDEV----------VAQKEKAIQDKSERIVSLQKELSS 98
+L+ I ++++ +DE ELKG DE +A + +A QD S ++ ++K L S
Sbjct: 1726 KLEGDINAMQTDLDEMHGELKGADERCKKAMADAARLADELRAEQDHSNQVEKVRKNLES 1785
Query: 99 LQKKE---TLNAAE---------QVDKAHARADELEKQIDNLKKESEKQQKEKEALEARA 146
Q KE L+ AE + K +R ELE ++DN ++ + QK + R
Sbjct: 1786 -QVKEFQIRLDEAEASSLKGGKKMIQKLESRVHELEAELDNEQRRHAETQKNMRKADRRL 1844
Query: 147 IEAEKKISDLSAKLEKLQKINDEQKSKIRKTERALKVAEE 186
E + + E+LQ++ D+ +KI+ +R ++ AEE
Sbjct: 1845 KELAFQADEDRKNQERLQELIDKLNAKIKTFKRQVEEAEE 1884
>sp|Q9P2M7|CING_HUMAN Cingulin OS=Homo sapiens GN=CGN PE=1 SV=2
Length = 1197
Score = 35.0 bits (79), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 89/163 (54%), Gaps = 20/163 (12%)
Query: 46 ELDQLKSKIRSLESHIDE--KTQEL------KGKDEVVAQKEKAIQDKSERI------VS 91
+L L+ K+ LE+ +DE T EL +G+D+V + + +Q++S R +S
Sbjct: 957 QLKGLEEKVSRLETELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKIS 1016
Query: 92 LQKELSSLQKKETLNAAEQVDKAHARADELEKQIDNLKKESEKQQKEKEALEARAIEAEK 151
L+++ L K L ++E K A +LE Q L++ + +++EK L++ + E+
Sbjct: 1017 LERQNKDL--KTRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLER 1074
Query: 152 KISDLSAKLE-KLQKINDEQKS---KIRKTERALKVAEEEMMR 190
K+ +LS ++E + Q +ND++ +++ +R + AEEE+ R
Sbjct: 1075 KVKELSIQIEDERQHVNDQKDQLSLRVKALKRQVDEAEEEIER 1117
>sp|P34562|YNP9_CAEEL GRIP and coiled-coil domain-containing protein T05G5.9
OS=Caenorhabditis elegans GN=T05G5.9 PE=4 SV=3
Length = 660
Score = 34.7 bits (78), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 88 RIVSLQKELSSLQKKETLNAAEQVDKAHARADELEKQIDNLKKESEKQQKEKEALEARAI 147
RIV ELS Q E L A ++ ++ R LE+ +D LK E+EK + E A+ +
Sbjct: 213 RIV----ELSDQQGNEKLGLARKMAESENRGRILEEAVDVLKSENEKLLAKNEEFSAKLV 268
Query: 148 EAEKKISDLSAK----LEKLQKINDEQKSKIRKTERA 180
+EK+ ++ K LEK K DE + I K E++
Sbjct: 269 SSEKEFAEFKKKSHFVLEKKGKQEDETRKAIEKLEKS 305
>sp|Q32L59|TMC5B_BOVIN Transmembrane and coiled-coil domain-containing protein 5B OS=Bos
taurus GN=TMCO5B PE=2 SV=1
Length = 351
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 79/144 (54%), Gaps = 12/144 (8%)
Query: 51 KSKIRSLESHIDEKTQELKGKDEVVAQKEKAIQDKSERIVSLQKELSSLQKKETLNAAEQ 110
K + SL S +++ Q + ++V+ +K IQ+K E I SL+++++ ++ A +
Sbjct: 25 KQNLDSLNSDLEKDLQRMDEANQVLLKK---IQEKEETIQSLERDITL-----SVRQARE 76
Query: 111 VDKAHARADELEKQIDNLKKESEKQQKEKEALEARAIEAEKKIS----DLSAKLEKLQKI 166
++ R E E + +L+ E+ K +K KE L +E +K+IS ++S E L+++
Sbjct: 77 REELDHRTAEKEAALRDLELETAKLEKNKEILSRSVVEVQKEISRKFKNVSLDKEALKQM 136
Query: 167 NDEQKSKIRKTERALKVAEEEMMR 190
E K K++K+ + E+E+++
Sbjct: 137 LAELKVKLQKSTESCASQEKELVK 160
>sp|B1MTG4|CING_CALMO Cingulin OS=Callicebus moloch GN=CGN PE=3 SV=1
Length = 1198
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 93/179 (51%), Gaps = 20/179 (11%)
Query: 46 ELDQLKSKIRSLESHIDE--KTQEL------KGKDEVVAQKEKAIQDKSERI------VS 91
+L L+ K+ LE+ +DE T EL +G+D+V + + +Q++S R +S
Sbjct: 958 QLKGLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKIS 1017
Query: 92 LQKELSSLQKKETLNAAEQVDKAHARADELEKQIDNLKKESEKQQKEKEALEARAIEAEK 151
L+++ L K L ++E K A +LE Q L++ + +++EK L++ + E+
Sbjct: 1018 LERQNKDL--KTRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLER 1075
Query: 152 KISDLSAKLE-KLQKINDEQKS---KIRKTERALKVAEEEMMRAKFEATSRSKELTEVH 206
K+ +LS ++E + Q +ND++ +++ R + AEEE+ R +EL E H
Sbjct: 1076 KVKELSIQIEDERQHVNDQKDQLSLRVKAFFRQVDEAEEEIERLDSLRRKAQRELEEQH 1134
>sp|Q6P2H3|CEP85_HUMAN Centrosomal protein of 85 kDa OS=Homo sapiens GN=CEP85 PE=1 SV=1
Length = 762
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 108 AEQVDKAHARADELEKQIDNLKKESEKQQKEKEALEARAIEAEKKISDLSAKLEKLQKIN 167
+E+V K R +K I+NLKK+ +K+ ++ + R E+ ++DL LE QK +
Sbjct: 438 SEEVKKQEERVKGRDKHINNLKKKCQKESEQNREKQQRIETLERYLADLPT-LEDHQKQS 496
Query: 168 DEQK-SKIRKTERALKVAEEEMMRAKFEATSRSKEL 202
+ K S+++ TE KV E E + + +A R KE+
Sbjct: 497 QQLKDSELKSTELQEKVTELESLLEETQAICREKEI 532
>sp|P34216|EDE1_YEAST EH domain-containing and endocytosis protein 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=EDE1 PE=1
SV=2
Length = 1381
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 88/171 (51%), Gaps = 16/171 (9%)
Query: 43 LKIELDQLKSKIRSLESHIDEKTQELKGKDEVVAQKEKAIQDKSERIVSLQKELSSLQKK 102
LK ++ L S SL+S ++EK Q++K + +V K ++ + +LQKE+ L +K
Sbjct: 714 LKEQITNLNSMTASLQSQLNEKQQQVKQERSMVDVNSKQLELNQVTVANLQKEIDGLGEK 773
Query: 103 ETLNAAEQ---------VDKAHARADELEKQIDNLKKESEKQQKEKEALEARAIEAEKKI 153
++ +Q V++ HA+ + + N K+++ +EK+ LE R + E++
Sbjct: 774 ISVYLTKQKELNDYQKTVEEQHAQLQAKYQDLSN--KDTDLTDREKQ-LEERNRQIEEQE 830
Query: 154 SDLSAKLEKLQKINDEQKSKIRKTERALKVAEEEMMRAKFEATSRSKELTE 204
+ + KLQ++ D+ + + + + + A++E+ E + +EL+E
Sbjct: 831 NLYHQHVSKLQEMFDD----LSQRKASFEKADQELKERNIEYANNVRELSE 877
>sp|A7THU9|SP110_VANPO Spindle pole body component 110 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=SPC110 PE=3 SV=1
Length = 929
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 72/141 (51%), Gaps = 17/141 (12%)
Query: 38 VDSSPLKIELDQLKSKIRSLESHIDEKTQELKGKDEVVAQKEKAIQDKSERIVSLQKELS 97
++ L+ ++D+L ++ +L +D T+EL KDE++A E+ I+ + I +L+ +
Sbjct: 214 IERDNLQNKIDKLSEELGTLNDKLDTITKELIAKDELIASNEEDIKQLNSHIDTLKNTIR 273
Query: 98 SLQKKETLNAAEQVDKAHARADELEKQIDNLKKES---------EKQQKEKEA----LEA 144
L+ ET+ E+ D + DE++ +NL + + KEK + LE
Sbjct: 274 GLE--ETI--IEKDDNLKKQKDEIKTLNNNLNDSDHLGSEFLLLQNKLKEKNSQISVLEN 329
Query: 145 RAIEAEKKISDLSAKLEKLQK 165
I+++ ++L +LE LQK
Sbjct: 330 NLIDSKNTATELKTRLENLQK 350
>sp|P59242|CING_MOUSE Cingulin OS=Mus musculus GN=Cgn PE=1 SV=1
Length = 1191
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 94/179 (52%), Gaps = 20/179 (11%)
Query: 46 ELDQLKSKIRSLESHIDE--KTQEL------KGKDEVVAQKEKAIQDKSERI------VS 91
+L L+ K+ LE+ +DE T EL +G+D+V + + +Q++S R +S
Sbjct: 951 QLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKIS 1010
Query: 92 LQKELSSLQKKETLNAAEQVDKAHARADELEKQIDNLKKESEKQQKEKEALEARAIEAEK 151
L+++ L K L ++E K A +LE Q L++ + +++EK L++ + E+
Sbjct: 1011 LERQNKDL--KTRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLER 1068
Query: 152 KISDLSAKL-EKLQKINDEQKS---KIRKTERALKVAEEEMMRAKFEATSRSKELTEVH 206
++ +LS ++ ++ Q +ND++ +++ +R + AEEE+ R +EL E H
Sbjct: 1069 RVKELSIQIDDERQHVNDQKDQLTLRVKALKRQVDEAEEEIERLDSLRKKAQRELEEQH 1127
>sp|P42567|EPS15_MOUSE Epidermal growth factor receptor substrate 15 OS=Mus musculus
GN=Eps15 PE=1 SV=1
Length = 897
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 109/235 (46%), Gaps = 41/235 (17%)
Query: 9 FSLFFALI----LTAADV--SIQGEDVPP---------LTASDAV-DSSPLKIELDQLKS 52
F+L F LI + D S+ E +PP +T S V D S +K ELD L +
Sbjct: 282 FALAFHLINQKLIKGIDPPHSLTPEMIPPSDRSSLQKNITGSSPVADFSAIK-ELDTLNN 340
Query: 53 KIRSLESHIDEKTQELKGKDEVVAQKEKAIQDKSERIVSLQKELSSLQKKETLNAAEQVD 112
+I L+ + Q+LK K++ V Q+ +QD LQ E+ ++E++N +
Sbjct: 341 EIVDLQREKNNVEQDLKEKEDTVKQRTSEVQD-------LQDEV----QRESINLQKLQ- 388
Query: 113 KAHARADELEKQIDNLKKESEKQQKEKEALEARAIEAEKKISDLSAKLEKLQKINDEQKS 172
+ EL ++D K + E+Q +E + + E + IS L A++ Q+S
Sbjct: 389 AQKQQVQELLGELDEQKAQLEEQLQE---VRKKCAEEAQLISSLKAEITS-------QES 438
Query: 173 KIRKTERALKVAEEEMMRAKFEATSRSKELTEVHSAWLPPWLAVHLLQCQSLIET 227
+I E L A EE+ R + E T++ +E E A L P L HL + Q I +
Sbjct: 439 QISSYEEELLKAREELSRLQQE-TAQLEESVESGKAQLEP-LQQHLQESQQEISS 491
>sp|P42566|EPS15_HUMAN Epidermal growth factor receptor substrate 15 OS=Homo sapiens
GN=EPS15 PE=1 SV=2
Length = 896
Score = 32.7 bits (73), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 90/196 (45%), Gaps = 25/196 (12%)
Query: 32 LTASDAVDSSPLKIELDQLKSKIRSLESHIDEKTQELKGKDEVVAQKEKAIQDKSERIVS 91
+ +S D S +K ELD L ++I L+ + Q+LK K++ + Q+ +QD
Sbjct: 321 IGSSPVADFSAIK-ELDTLNNEIVDLQREKNNVEQDLKEKEDTIKQRTSEVQD------- 372
Query: 92 LQKELSSLQKKETLNAAEQVDKAHARADELEKQIDNLKKESEKQQKEKEALEARAIEAEK 151
LQ E+ ++E N + + EL ++D K + E+Q KE + + E +
Sbjct: 373 LQDEV----QRENTNLQKLQ-AQKQQVQELLDELDEQKAQLEEQLKE---VRKKCAEEAQ 424
Query: 152 KISDLSAKLEKLQKINDEQKSKIRKTERALKVAEEEMMRAKFEATSRSKELTEVHSAWLP 211
IS L A+L Q+S+I E L A EE+ R + E T+ +E E A L
Sbjct: 425 LISSLKAELTS-------QESQISTYEEELAKAREELSRLQQE-TAELEESVESGKAQLE 476
Query: 212 PWLAVHLLQCQSLIET 227
P L HL Q I +
Sbjct: 477 P-LQQHLQDSQQEISS 491
>sp|B3EX63|CING_SORAR Cingulin OS=Sorex araneus GN=CGN PE=3 SV=1
Length = 1153
Score = 32.7 bits (73), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 91/178 (51%), Gaps = 18/178 (10%)
Query: 41 SPLKIELDQLKSKIRSLESHIDEKTQELKGKDEVVAQKEKAIQDKSERI------VSLQK 94
S L++ELD+ ++ + L I+ + +D+V + + +Q++S R +SL++
Sbjct: 922 SRLEMELDEERNTVELLTDRIN------RSRDQVDQLRTELMQERSARQDLECDKISLER 975
Query: 95 ELSSLQKKETLNAAEQVDKAHARADELEKQIDNLKKESEKQQKEKEALEARAIEAEKKIS 154
+ L K L + E K A +LE Q L++ + + +EK L++ + E+++
Sbjct: 976 QNKDL--KGRLASLEGFQKPSASLSQLESQNRELQERLQAEDREKTVLQSTNRKLERRVK 1033
Query: 155 DLSAKL-EKLQKINDEQKS---KIRKTERALKVAEEEMMRAKFEATSRSKELTEVHSA 208
+LS ++ ++ Q +ND++ K++ +R + AEEE+ R +EL E H A
Sbjct: 1034 ELSIQIDDERQHVNDQKDQLSLKVKALKRQVDEAEEEIERLDGLRKKAQRELEEQHEA 1091
>sp|Q9UZC8|RAD50_PYRAB DNA double-strand break repair Rad50 ATPase OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=rad50 PE=3 SV=1
Length = 880
Score = 32.7 bits (73), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 31/192 (16%)
Query: 28 DVPPLTASDAVDSSPLKIELDQLKSKIRSLESHIDEKTQELKGKDEVVAQKEKAIQDKSE 87
D+P L + + LK D+ +SK+R LE + + ELK +EV+ + EK K E
Sbjct: 288 DIPKLQEKEK-EYRKLKGFRDEYESKLRRLEKELSKWESELKAIEEVIKEGEK----KKE 342
Query: 88 RIVSLQKELSSLQKK--------ETLNAAEQVDKAHARADELEKQIDNLKKESEKQQKEK 139
R ++++LS ++K+ E L A+QV K ++E+ LK S + EK
Sbjct: 343 RAEEIREKLSEIEKRLEELKPYVEELEDAKQVQK------QIERLKARLKGLSPGEVIEK 396
Query: 140 -EALEARAIEAEKKISDLSAKLEKLQKINDEQKSKIRKTERALKVAEEEMMRAKFEATSR 198
E+LE E E+ I +++ ++ ++++ +E+ I EE+ +AK +
Sbjct: 397 LESLEKERTEIEEAIKEITTRIGQMEQEKNERMKAI-----------EELRKAKGKCPVC 445
Query: 199 SKELTEVHSAWL 210
+ELTE H L
Sbjct: 446 GRELTEEHKKEL 457
>sp|Q9LI74|CHUP1_ARATH Protein CHUP1, chloroplastic OS=Arabidopsis thaliana GN=CHUP1 PE=1
SV=1
Length = 1004
Score = 32.3 bits (72), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 29/183 (15%)
Query: 46 ELDQLKSKIRSLESHIDEKTQELKGKDEVVAQKEKAIQDKSERIVSLQKELSSLQKKE-- 103
EL+ ++KI+ L+ I + KG+ ++ L++ +SSLQ KE
Sbjct: 209 ELEVARNKIKELQRQIQLDANQTKGQ-----------------LLLLKQHVSSLQMKEEE 251
Query: 104 TLNAAEQVDKAHARADELEKQIDNLKKESEKQQKEKEALEARAIEAEKKISDLSAKLE-- 161
+N +V++ +LE Q+ LK+++ + Q EK L + AE +I+ LS E
Sbjct: 252 AMNKDTEVERKLKAVQDLEVQVMELKRKNRELQHEKRELSIKLDSAEARIATLSNMTESD 311
Query: 162 KLQKINDEQKSKIRKTERALKVAEEEMMRAKFEATSRSKELTE-VHSAWLPPWLAVHLLQ 220
K+ K+ +E + E LK E M +R E+ E V+ W+ L L
Sbjct: 312 KVAKVREEVNNLKHNNEDLLKQVEGLQM-------NRFSEVEELVYLRWVNACLRYELRN 364
Query: 221 CQS 223
Q+
Sbjct: 365 YQT 367
>sp|Q5U4E6|GOGA4_RAT Golgin subfamily A member 4 OS=Rattus norvegicus GN=Golga4 PE=1 SV=2
Length = 2259
Score = 32.3 bits (72), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 83/160 (51%), Gaps = 7/160 (4%)
Query: 49 QLKSKIRSLESHIDEKTQELKGKDEVVAQKEKAIQDKSERIVSLQKELSSLQKKETLNAA 108
Q +S I+ L++ +D K +E KDE + ++ + ++ER SL+ E+ +KKE +
Sbjct: 1496 QYQSTIKDLQTQLDLKAKEAGEKDEQIRLLKEDLDQQNERFESLKGEM---EKKEC-DLE 1551
Query: 109 EQVDKAHARADELEKQIDNLKKESEKQQKEKEALEARAIEAEKKISDLSAKLEKLQKIND 168
++ AR ELE I KKE E EAL + + + + S L L++L+++
Sbjct: 1552 TELKTRTARVVELEDCITQRKKEVESL---NEALRNCSQQRDTEHSGLVQTLQRLEELGQ 1608
Query: 169 EQKSKIRKTERALKVAEEEMMRAKFEATSRSKELTEVHSA 208
E+ +K+R+ E + E + + E KEL +V+S+
Sbjct: 1609 EKDNKVREAEETVLGLRERVSSLEAELRVVRKELDDVNSS 1648
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.124 0.336
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,089,481
Number of Sequences: 539616
Number of extensions: 4013820
Number of successful extensions: 64010
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1603
Number of HSP's successfully gapped in prelim test: 4131
Number of HSP's that attempted gapping in prelim test: 34731
Number of HSP's gapped (non-prelim): 20139
length of query: 321
length of database: 191,569,459
effective HSP length: 117
effective length of query: 204
effective length of database: 128,434,387
effective search space: 26200614948
effective search space used: 26200614948
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)