Query 020810
Match_columns 321
No_of_seqs 446 out of 2116
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 05:19:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020810.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020810hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4412 26S proteasome regulat 99.9 1.6E-22 3.5E-27 166.7 9.1 99 223-321 100-198 (226)
2 KOG4412 26S proteasome regulat 99.8 9.6E-21 2.1E-25 156.3 10.5 132 174-321 33-165 (226)
3 PHA02875 ankyrin repeat protei 99.8 7.3E-19 1.6E-23 169.2 15.6 96 225-320 98-193 (413)
4 PHA02743 Viral ankyrin protein 99.8 1.1E-18 2.3E-23 147.6 14.5 100 222-321 50-154 (166)
5 PF12796 Ank_2: Ankyrin repeat 99.8 7.7E-19 1.7E-23 132.6 11.6 85 233-321 1-85 (89)
6 KOG0508 Ankyrin repeat protein 99.8 2.3E-19 5.1E-24 166.8 7.7 151 170-321 32-209 (615)
7 PHA02859 ankyrin repeat protei 99.8 5.5E-18 1.2E-22 148.6 15.8 113 209-321 67-185 (209)
8 PHA02791 ankyrin-like protein; 99.8 2.4E-18 5.1E-23 157.2 12.6 109 209-320 44-153 (284)
9 KOG0509 Ankyrin repeat and DHH 99.8 1.8E-18 4E-23 166.4 11.6 158 147-321 47-204 (600)
10 PHA02791 ankyrin-like protein; 99.8 8.9E-18 1.9E-22 153.5 15.2 108 211-321 77-186 (284)
11 PHA02736 Viral ankyrin protein 99.8 4.7E-18 1E-22 141.7 11.9 100 222-321 48-152 (154)
12 PHA02741 hypothetical protein; 99.8 1.2E-17 2.6E-22 141.6 14.1 129 180-319 22-156 (169)
13 PHA02874 ankyrin repeat protei 99.8 1.6E-17 3.5E-22 161.1 15.5 140 181-321 70-216 (434)
14 KOG0509 Ankyrin repeat and DHH 99.8 4.8E-18 1E-22 163.6 11.5 101 221-321 70-171 (600)
15 PHA02875 ankyrin repeat protei 99.8 1.8E-17 3.9E-22 159.5 15.7 125 180-321 103-228 (413)
16 KOG0502 Integral membrane anky 99.7 2.1E-18 4.5E-23 146.5 6.1 104 218-321 149-252 (296)
17 PHA02878 ankyrin repeat protei 99.7 1.3E-17 2.8E-22 163.6 12.5 111 210-321 149-261 (477)
18 PHA02741 hypothetical protein; 99.7 1.7E-17 3.7E-22 140.6 11.5 100 222-321 14-125 (169)
19 PLN03192 Voltage-dependent pot 99.7 5.2E-17 1.1E-21 169.0 15.1 111 210-321 540-681 (823)
20 PHA02859 ankyrin repeat protei 99.7 7.3E-17 1.6E-21 141.5 12.5 122 180-321 22-151 (209)
21 PHA02795 ankyrin-like protein; 99.7 1E-16 2.3E-21 152.7 13.9 94 228-321 187-288 (437)
22 PHA02878 ankyrin repeat protei 99.7 1.4E-16 3E-21 156.3 14.8 123 180-321 169-293 (477)
23 PHA03100 ankyrin repeat protei 99.7 1.2E-16 2.6E-21 156.6 14.2 106 215-321 93-202 (480)
24 PHA02874 ankyrin repeat protei 99.7 2E-16 4.3E-21 153.4 15.5 125 180-321 36-183 (434)
25 PHA02716 CPXV016; CPX019; EVM0 99.7 2.3E-16 4.9E-21 159.7 15.4 106 215-321 199-345 (764)
26 PHA02884 ankyrin repeat protei 99.7 1.5E-16 3.4E-21 145.7 12.7 107 209-315 47-157 (300)
27 PHA03095 ankyrin-like protein; 99.7 1.2E-16 2.7E-21 156.0 12.3 112 209-321 64-180 (471)
28 PHA02798 ankyrin-like protein; 99.7 2.3E-16 4.9E-21 155.3 14.0 112 209-321 52-174 (489)
29 PHA03100 ankyrin repeat protei 99.7 3.2E-16 7E-21 153.5 14.9 124 181-321 178-309 (480)
30 KOG0195 Integrin-linked kinase 99.7 4.9E-17 1.1E-21 143.2 7.9 101 221-321 26-126 (448)
31 PHA02743 Viral ankyrin protein 99.7 1.9E-16 4.1E-21 133.9 10.4 99 223-321 14-121 (166)
32 PHA02946 ankyin-like protein; 99.7 3.2E-16 6.9E-21 152.3 13.2 108 212-321 56-166 (446)
33 KOG0512 Fetal globin-inducing 99.7 1.1E-16 2.3E-21 131.5 8.3 104 213-316 81-185 (228)
34 PHA02716 CPXV016; CPX019; EVM0 99.7 3.5E-16 7.6E-21 158.4 13.3 115 207-321 154-310 (764)
35 PHA02884 ankyrin repeat protei 99.7 7.5E-16 1.6E-20 141.2 14.2 99 223-321 26-130 (300)
36 KOG0514 Ankyrin repeat protein 99.7 6.4E-17 1.4E-21 146.4 6.8 99 222-320 261-399 (452)
37 PHA03095 ankyrin-like protein; 99.7 4.1E-16 8.8E-21 152.4 12.5 108 213-321 207-316 (471)
38 KOG4214 Myotrophin and similar 99.7 2.4E-16 5.2E-21 116.5 7.4 88 232-320 5-92 (117)
39 KOG0510 Ankyrin repeat protein 99.7 1.1E-15 2.4E-20 150.4 13.2 100 222-321 299-403 (929)
40 PHA02876 ankyrin repeat protei 99.6 1.3E-15 2.7E-20 155.8 12.7 109 212-321 359-469 (682)
41 PHA02946 ankyin-like protein; 99.6 2.5E-15 5.5E-20 146.0 13.9 97 223-320 167-268 (446)
42 KOG0512 Fetal globin-inducing 99.6 9.8E-16 2.1E-20 125.9 8.6 91 231-321 65-156 (228)
43 PHA02917 ankyrin-like protein; 99.6 1.6E-15 3.5E-20 153.4 11.8 100 222-321 25-164 (661)
44 PHA02730 ankyrin-like protein; 99.6 2.7E-15 5.7E-20 149.6 12.6 123 197-321 346-488 (672)
45 KOG0510 Ankyrin repeat protein 99.6 1.6E-15 3.4E-20 149.3 10.8 101 221-321 265-367 (929)
46 KOG4177 Ankyrin [Cell wall/mem 99.6 1.6E-15 3.6E-20 156.8 11.1 99 222-320 533-631 (1143)
47 PHA02876 ankyrin repeat protei 99.6 2.5E-15 5.4E-20 153.7 12.2 91 230-320 146-236 (682)
48 PHA02989 ankyrin repeat protei 99.6 3E-15 6.4E-20 147.6 11.9 67 253-319 247-313 (494)
49 PHA02736 Viral ankyrin protein 99.6 1E-15 2.3E-20 127.5 7.1 97 223-321 11-119 (154)
50 PHA02989 ankyrin repeat protei 99.6 3.7E-15 8E-20 146.9 11.7 110 211-321 91-211 (494)
51 PHA02798 ankyrin-like protein; 99.6 4.4E-15 9.6E-20 146.2 11.8 111 210-321 91-212 (489)
52 KOG0508 Ankyrin repeat protein 99.6 1.3E-15 2.8E-20 142.0 7.1 97 225-321 80-176 (615)
53 PHA02795 ankyrin-like protein; 99.6 7.1E-15 1.5E-19 140.2 11.1 112 207-321 130-247 (437)
54 PHA02730 ankyrin-like protein; 99.6 1.1E-14 2.3E-19 145.3 12.0 101 220-320 32-142 (672)
55 PHA02917 ankyrin-like protein; 99.6 1.8E-14 3.8E-19 145.9 12.4 108 213-321 380-512 (661)
56 KOG4177 Ankyrin [Cell wall/mem 99.6 1.1E-14 2.3E-19 150.9 10.5 96 226-321 504-599 (1143)
57 cd00204 ANK ankyrin repeats; 99.6 5.7E-14 1.2E-18 110.6 12.4 95 226-320 4-98 (126)
58 PLN03192 Voltage-dependent pot 99.5 4.4E-14 9.6E-19 147.1 14.0 94 226-319 522-615 (823)
59 PF12796 Ank_2: Ankyrin repeat 99.5 1E-13 2.2E-18 104.5 10.7 64 229-292 26-89 (89)
60 PF13857 Ank_5: Ankyrin repeat 99.5 1.4E-14 3.1E-19 99.8 4.6 55 248-302 1-56 (56)
61 PTZ00322 6-phosphofructo-2-kin 99.5 8.6E-14 1.9E-18 141.4 12.2 87 231-317 84-170 (664)
62 PF13637 Ank_4: Ankyrin repeat 99.5 4.3E-14 9.3E-19 96.6 6.8 54 262-315 1-54 (54)
63 KOG0514 Ankyrin repeat protein 99.5 4.5E-14 9.7E-19 128.1 8.3 97 220-316 331-428 (452)
64 KOG0515 p53-interacting protei 99.5 5.4E-14 1.2E-18 132.6 8.6 89 233-321 554-642 (752)
65 KOG0505 Myosin phosphatase, re 99.5 5.6E-14 1.2E-18 133.1 8.8 111 210-321 88-257 (527)
66 KOG0502 Integral membrane anky 99.5 1.2E-13 2.6E-18 117.7 8.8 119 181-317 162-280 (296)
67 KOG0507 CASK-interacting adapt 99.5 6.4E-14 1.4E-18 137.2 7.8 105 217-321 37-141 (854)
68 PF13637 Ank_4: Ankyrin repeat 99.5 1.5E-13 3.3E-18 93.9 6.6 54 229-282 1-54 (54)
69 KOG4214 Myotrophin and similar 99.5 1.5E-13 3.2E-18 101.8 6.8 75 228-302 33-107 (117)
70 COG0666 Arp FOG: Ankyrin repea 99.5 3.8E-13 8.1E-18 116.7 10.3 104 214-318 92-203 (235)
71 COG0666 Arp FOG: Ankyrin repea 99.4 1.2E-12 2.5E-17 113.6 12.2 99 223-321 67-173 (235)
72 PHA02792 ankyrin-like protein; 99.4 6.8E-13 1.5E-17 131.3 11.2 113 206-321 319-436 (631)
73 cd00204 ANK ankyrin repeats; 99.4 4.3E-12 9.3E-17 99.8 13.7 93 223-315 34-126 (126)
74 PHA02792 ankyrin-like protein; 99.4 9.9E-13 2.1E-17 130.1 10.5 112 209-321 353-479 (631)
75 TIGR00870 trp transient-recept 99.4 6.7E-13 1.5E-17 137.1 9.5 95 226-320 125-242 (743)
76 KOG1710 MYND Zn-finger and ank 99.4 3.3E-12 7.1E-17 112.9 11.4 95 222-316 38-133 (396)
77 TIGR00870 trp transient-recept 99.3 6.8E-12 1.5E-16 129.6 12.7 97 225-321 78-201 (743)
78 KOG0195 Integrin-linked kinase 99.3 3.4E-12 7.3E-17 112.9 8.5 83 222-304 60-142 (448)
79 PF13857 Ank_5: Ankyrin repeat 99.3 1.5E-12 3.2E-17 89.7 4.8 54 216-269 3-56 (56)
80 KOG0515 p53-interacting protei 99.3 6E-12 1.3E-16 119.0 7.8 94 222-315 576-672 (752)
81 KOG0505 Myosin phosphatase, re 99.3 6.4E-12 1.4E-16 119.3 6.8 89 233-321 44-132 (527)
82 KOG0507 CASK-interacting adapt 99.2 2.3E-11 4.9E-16 119.6 8.6 96 222-317 75-170 (854)
83 KOG3676 Ca2+-permeable cation 99.2 2.9E-11 6.4E-16 119.9 8.5 95 226-320 181-298 (782)
84 KOG3676 Ca2+-permeable cation 99.2 2.1E-10 4.5E-15 114.0 13.9 133 180-317 185-330 (782)
85 PTZ00322 6-phosphofructo-2-kin 99.1 4.8E-10 1E-14 114.2 11.2 87 216-303 103-196 (664)
86 KOG1710 MYND Zn-finger and ank 99.1 5.3E-10 1.1E-14 99.1 9.0 92 229-320 12-104 (396)
87 KOG0506 Glutaminase (contains 99.1 1.5E-10 3.3E-15 108.3 5.6 91 227-317 504-595 (622)
88 KOG0705 GTPase-activating prot 99.0 2.8E-09 6E-14 102.1 10.8 60 228-287 660-719 (749)
89 KOG0783 Uncharacterized conser 99.0 3.1E-10 6.6E-15 112.4 4.0 83 222-304 45-128 (1267)
90 KOG0818 GTPase-activating prot 98.9 3.3E-09 7.1E-14 100.0 9.5 85 232-316 136-221 (669)
91 KOG4369 RTK signaling protein 98.9 1.1E-09 2.3E-14 111.4 4.0 112 209-321 771-883 (2131)
92 PF13606 Ank_3: Ankyrin repeat 98.8 5.5E-09 1.2E-13 62.2 3.8 28 294-321 1-28 (30)
93 KOG4369 RTK signaling protein 98.8 1.7E-09 3.6E-14 110.1 2.5 94 227-320 755-849 (2131)
94 KOG0522 Ankyrin repeat protein 98.8 2.2E-08 4.7E-13 95.5 7.8 87 231-317 22-110 (560)
95 PF13606 Ank_3: Ankyrin repeat 98.7 1.3E-08 2.9E-13 60.5 4.0 28 262-289 2-29 (30)
96 KOG0782 Predicted diacylglycer 98.7 2.5E-08 5.4E-13 95.5 6.7 95 223-317 893-989 (1004)
97 PF00023 Ank: Ankyrin repeat H 98.7 2.7E-08 5.9E-13 60.5 4.4 31 262-292 2-32 (33)
98 KOG0783 Uncharacterized conser 98.6 1.3E-08 2.7E-13 101.3 2.2 66 255-320 45-111 (1267)
99 PF00023 Ank: Ankyrin repeat H 98.6 8.9E-08 1.9E-12 58.2 4.4 33 228-260 1-33 (33)
100 KOG0705 GTPase-activating prot 98.5 2.7E-07 5.9E-12 88.7 7.8 128 148-320 588-719 (749)
101 KOG0511 Ankyrin repeat protein 98.4 8.2E-07 1.8E-11 81.7 8.6 74 231-305 38-111 (516)
102 KOG0511 Ankyrin repeat protein 98.4 5.9E-07 1.3E-11 82.6 6.2 57 263-319 37-93 (516)
103 KOG0506 Glutaminase (contains 98.3 4.4E-07 9.5E-12 85.5 3.9 66 221-286 531-597 (622)
104 KOG0521 Putative GTPase activa 98.3 6.1E-07 1.3E-11 92.0 4.9 90 226-315 653-742 (785)
105 KOG3609 Receptor-activated Ca2 98.3 1.8E-06 3.9E-11 86.8 8.0 93 222-321 55-157 (822)
106 KOG0818 GTPase-activating prot 98.3 2.1E-06 4.5E-11 81.5 7.5 76 209-284 147-222 (669)
107 KOG0520 Uncharacterized conser 98.2 6.7E-07 1.4E-11 91.6 3.3 95 225-320 570-666 (975)
108 KOG0522 Ankyrin repeat protein 98.1 4.6E-06 1E-10 79.9 6.7 65 220-284 46-110 (560)
109 KOG0782 Predicted diacylglycer 98.1 5E-06 1.1E-10 80.0 6.2 89 233-321 870-960 (1004)
110 KOG2384 Major histocompatibili 98.0 1.1E-05 2.3E-10 68.0 6.3 73 220-292 3-76 (223)
111 KOG2384 Major histocompatibili 98.0 1.3E-05 2.7E-10 67.6 6.1 66 252-317 2-68 (223)
112 KOG0521 Putative GTPase activa 97.5 5.9E-05 1.3E-09 77.7 3.5 70 251-320 643-714 (785)
113 KOG0520 Uncharacterized conser 97.5 5.3E-05 1.2E-09 78.0 2.8 93 223-316 602-701 (975)
114 KOG2505 Ankyrin repeat protein 97.3 0.00044 9.6E-09 66.1 5.7 63 241-303 403-471 (591)
115 smart00248 ANK ankyrin repeats 97.2 0.00075 1.6E-08 37.7 3.9 26 295-320 2-27 (30)
116 smart00248 ANK ankyrin repeats 96.9 0.0022 4.8E-08 35.6 4.1 26 262-287 2-27 (30)
117 smart00727 STI1 Heat shock cha 96.6 0.00057 1.2E-08 43.5 0.3 34 49-85 5-39 (41)
118 KOG2505 Ankyrin repeat protein 96.1 0.017 3.6E-07 55.7 7.1 54 226-282 427-480 (591)
119 KOG3609 Receptor-activated Ca2 96.1 0.0083 1.8E-07 61.1 5.0 83 229-318 25-111 (822)
120 smart00727 STI1 Heat shock cha 96.0 0.008 1.7E-07 38.1 3.0 21 62-82 5-25 (41)
121 PF06128 Shigella_OspC: Shigel 94.1 0.25 5.4E-06 43.3 7.6 89 230-319 180-278 (284)
122 KOG0553 TPR repeat-containing 93.1 0.16 3.5E-06 46.3 5.0 26 55-80 219-245 (304)
123 KOG0010 Ubiquitin-like protein 87.7 1.6 3.4E-05 42.5 6.6 37 118-154 182-221 (493)
124 PF11929 DUF3447: Domain of un 85.8 1.5 3.2E-05 31.6 4.2 48 230-284 7-54 (76)
125 PF03158 DUF249: Multigene fam 85.0 5.2 0.00011 34.1 7.6 46 265-316 146-191 (192)
126 KOG0553 TPR repeat-containing 82.4 1.1 2.5E-05 40.9 2.8 20 49-68 227-246 (304)
127 PF09280 XPC-binding: XPC-bind 82.1 2.1 4.5E-05 29.4 3.4 38 51-89 4-44 (59)
128 PF11929 DUF3447: Domain of un 80.8 3.3 7.2E-05 29.8 4.3 47 264-317 8-54 (76)
129 PF09280 XPC-binding: XPC-bind 76.5 3.7 7.9E-05 28.2 3.2 21 62-82 2-22 (59)
130 KOG2857 Predicted MYND Zn-fing 75.3 2.2 4.7E-05 34.5 2.1 36 59-94 88-136 (157)
131 PF11212 DUF2999: Protein of u 74.4 8.3 0.00018 27.4 4.5 55 65-132 13-68 (82)
132 PF03158 DUF249: Multigene fam 73.7 6.3 0.00014 33.6 4.6 45 233-283 147-191 (192)
133 PF06757 Ins_allergen_rp: Inse 73.7 21 0.00045 30.2 8.0 131 53-198 30-162 (179)
134 PF06128 Shigella_OspC: Shigel 73.3 7.3 0.00016 34.4 5.0 56 233-288 219-280 (284)
135 KOG1308 Hsp70-interacting prot 68.3 15 0.00032 34.6 6.1 9 61-69 321-329 (377)
136 KOG0548 Molecular co-chaperone 68.2 11 0.00024 37.2 5.6 48 62-132 484-531 (539)
137 KOG1308 Hsp70-interacting prot 67.1 14 0.00031 34.6 5.8 10 113-122 341-350 (377)
138 PTZ00458 acyl CoA binding prot 61.3 29 0.00063 26.0 5.6 71 83-166 5-81 (90)
139 KOG0010 Ubiquitin-like protein 57.6 24 0.00053 34.6 5.7 13 308-320 470-482 (493)
140 TIGR00601 rad23 UV excision re 50.7 16 0.00034 35.0 3.2 45 62-123 249-294 (378)
141 KOG0817 Acyl-CoA-binding prote 50.6 65 0.0014 26.3 6.4 71 81-166 7-83 (142)
142 KOG0011 Nucleotide excision re 50.3 57 0.0012 30.4 6.6 20 64-83 219-238 (340)
143 PRK13676 hypothetical protein; 43.1 57 0.0012 25.2 4.9 86 82-176 4-89 (114)
144 TIGR00601 rad23 UV excision re 41.3 45 0.00097 32.0 4.8 43 75-131 249-292 (378)
145 PF07319 DnaI_N: Primosomal pr 40.4 46 0.001 24.9 3.8 47 113-159 6-52 (94)
146 PF07319 DnaI_N: Primosomal pr 40.0 21 0.00045 26.8 1.9 18 115-132 25-42 (94)
147 KOG0011 Nucleotide excision re 38.5 90 0.002 29.1 6.0 41 48-89 216-259 (340)
148 PF06133 DUF964: Protein of un 34.0 1.1E+02 0.0024 23.1 5.2 61 62-131 27-87 (108)
149 PF07631 PSD4: Protein of unkn 33.3 2E+02 0.0044 22.9 6.7 46 51-96 17-64 (128)
150 cd00435 ACBP Acyl CoA binding 31.0 1.8E+02 0.0039 21.3 5.7 69 82-165 4-78 (85)
151 PF14181 YqfQ: YqfQ-like prote 30.0 1.3E+02 0.0029 25.1 5.2 27 127-153 74-100 (161)
152 PF00887 ACBP: Acyl CoA bindin 27.9 1.3E+02 0.0029 21.9 4.5 70 82-164 4-79 (87)
153 PF03672 UPF0154: Uncharacteri 26.3 80 0.0017 22.1 2.8 10 83-92 37-46 (64)
154 KOG3836 HLH transcription fact 26.1 17 0.00038 36.5 -0.7 53 236-288 403-455 (605)
155 KOG1595 CCCH-type Zn-finger pr 26.0 11 0.00024 37.1 -2.0 90 227-318 56-155 (528)
156 PRK13676 hypothetical protein; 26.0 2.6E+02 0.0055 21.5 6.1 61 62-131 30-90 (114)
157 PF06133 DUF964: Protein of un 24.4 87 0.0019 23.7 3.1 64 110-176 21-86 (108)
158 PF15341 SLX9: Ribosome biogen 23.2 69 0.0015 25.2 2.3 25 61-93 96-120 (121)
159 PRK00523 hypothetical protein; 21.6 1.1E+02 0.0024 21.8 2.8 9 83-91 45-53 (72)
No 1
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.88 E-value=1.6e-22 Score=166.70 Aligned_cols=99 Identities=30% Similarity=0.387 Sum_probs=62.6
Q ss_pred hhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHH
Q 020810 223 EEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYA 302 (321)
Q Consensus 223 ~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A 302 (321)
+..+..|.|+||||+..|.++++.+|+++|+.++.+|..|.||||.|+..|.++++++|+..|+.+|.+|..|+||||.|
T Consensus 100 na~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~TpL~~a 179 (226)
T KOG4412|consen 100 NATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTPLHHA 179 (226)
T ss_pred ceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCcccccCccHHHHH
Confidence 44455566666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred HHCCcHHHHHHHHHCCCCC
Q 020810 303 AGYGRKECVALLLENGAAV 321 (321)
Q Consensus 303 ~~~g~~~iv~~Ll~~GAdv 321 (321)
...|+.++..+|+++||++
T Consensus 180 l~e~~~d~a~lLV~~gAd~ 198 (226)
T KOG4412|consen 180 LAEGHPDVAVLLVRAGADT 198 (226)
T ss_pred HhccCchHHHHHHHhccce
Confidence 5556666666666666653
No 2
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.84 E-value=9.6e-21 Score=156.29 Aligned_cols=132 Identities=29% Similarity=0.419 Sum_probs=116.6
Q ss_pred HHHHHcCChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHc-C
Q 020810 174 LDEIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAA-G 252 (321)
Q Consensus 174 ~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~-g 252 (321)
...-....+.+++..++..+++.+|+.-.+ ..++.+|..||||||+||..|+.++|+.|+.+ |
T Consensus 33 r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~n----------------v~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~ 96 (226)
T KOG4412|consen 33 RDDQDGRTPLHWACSFGHVEIVYFLLSQPN----------------VKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSG 96 (226)
T ss_pred cccccCCceeeeeeecCchhHHHHHHhcCC----------------CCCCCccccCCchhhhhhhcCcHHHHHHHhcCCC
Confidence 333455678888888888898888863211 12355689999999999999999999999988 9
Q ss_pred CCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 253 ADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 253 ~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
+++|..+..|+|+||||+..|+.+|+++|++.|+.++.+|..|.||||.|+.-|..+++++|+..||.+
T Consensus 97 advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~ 165 (226)
T KOG4412|consen 97 ADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPL 165 (226)
T ss_pred CCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999864
No 3
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.80 E-value=7.3e-19 Score=169.19 Aligned_cols=96 Identities=25% Similarity=0.318 Sum_probs=54.4
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHH
Q 020810 225 VGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAG 304 (321)
Q Consensus 225 ~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~ 304 (321)
.+..|+||||+|+..|+.+++++|++.|++++..+..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 98 ~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~ 177 (413)
T PHA02875 98 FYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMA 177 (413)
T ss_pred ccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHH
Confidence 34445555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred CCcHHHHHHHHHCCCC
Q 020810 305 YGRKECVALLLENGAA 320 (321)
Q Consensus 305 ~g~~~iv~~Ll~~GAd 320 (321)
.|+.+++++|+++||+
T Consensus 178 ~g~~eiv~~Ll~~ga~ 193 (413)
T PHA02875 178 KGDIAICKMLLDSGAN 193 (413)
T ss_pred cCCHHHHHHHHhCCCC
Confidence 5555555555555554
No 4
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.80 E-value=1.1e-18 Score=147.61 Aligned_cols=100 Identities=24% Similarity=0.321 Sum_probs=93.1
Q ss_pred hhhcCCCCchHHHHHHHcCCHHH---HHHHHHcCCCCCCCC-CCCCcHHHHHHHCCCHHHHHHHHH-cCCCCCCccCCCC
Q 020810 222 AEEVGNEDESIVHHTASVGDAEG---LKNALAAGADKDEED-SEGRTALHFACGYGEVKCAQILLE-AGANVDALDKNKN 296 (321)
Q Consensus 222 ~~~~d~~g~t~Lh~Aa~~g~~~~---v~~Ll~~g~~~~~~d-~~g~TpLh~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~ 296 (321)
++..|..|+||||+||..|+.++ +++|+..|++++.+| ..|+||||+|+..++.+++++|+. .|++++.+|..|+
T Consensus 50 ~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~ 129 (166)
T PHA02743 50 LHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHE 129 (166)
T ss_pred hhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCC
Confidence 46678899999999999988654 899999999999998 589999999999999999999995 7999999999999
Q ss_pred cHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 297 TALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 297 TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
||||+|+..++.+++++|+.+||++
T Consensus 130 tpL~~A~~~~~~~iv~~Ll~~ga~~ 154 (166)
T PHA02743 130 TAYHIAYKMRDRRMMEILRANGAVC 154 (166)
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999999999985
No 5
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.80 E-value=7.7e-19 Score=132.61 Aligned_cols=85 Identities=51% Similarity=0.700 Sum_probs=80.5
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHH
Q 020810 233 VHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVA 312 (321)
Q Consensus 233 Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~ 312 (321)
||+||..|+.+++++|++.+.+++. |+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.+|+.++++
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~ 76 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVK 76 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHH
Confidence 7999999999999999999988876 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCCC
Q 020810 313 LLLENGAAV 321 (321)
Q Consensus 313 ~Ll~~GAdv 321 (321)
+|+++|+++
T Consensus 77 ~Ll~~g~~~ 85 (89)
T PF12796_consen 77 LLLEHGADV 85 (89)
T ss_dssp HHHHTTT-T
T ss_pred HHHHcCCCC
Confidence 999999986
No 6
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.78 E-value=2.3e-19 Score=166.77 Aligned_cols=151 Identities=29% Similarity=0.369 Sum_probs=124.1
Q ss_pred hhHHHHHHHcC-ChHHHHHHhCChhHHHHHHHHhcccc--------------------------CCcccchhhhcCCchh
Q 020810 170 LKPILDEIESG-GPSAMMKYWNDKDVLQKLGEAMGLAV--------------------------GGDATTSADNAGADEA 222 (321)
Q Consensus 170 ~~~~~~~~~~g-~~~~~~~~~~~~~~~~~l~~~~~~~~--------------------------~~d~~~~~~~~~~~~~ 222 (321)
+..++.+...| .|..++...+..+++++|.+..+... -.+++..+++.++.+
T Consensus 32 i~~l~~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~ga~V- 110 (615)
T KOG0508|consen 32 IISLIGEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRGASV- 110 (615)
T ss_pred HHHHhccccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhcCcc-
Confidence 44455555544 56667777888899999888654211 112345566666544
Q ss_pred hhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHH
Q 020810 223 EEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYA 302 (321)
Q Consensus 223 ~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A 302 (321)
+.......|||-.||.-|++++|++|+++|+|++..|++|.|.||+||.+||.+|++||++.|+|+|.++..|+|+||.+
T Consensus 111 N~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~c 190 (615)
T KOG0508|consen 111 NDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDC 190 (615)
T ss_pred ccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhh
Confidence 44445567999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHCCcHHHHHHHHHCCCCC
Q 020810 303 AGYGRKECVALLLENGAAV 321 (321)
Q Consensus 303 ~~~g~~~iv~~Ll~~GAdv 321 (321)
+..|+.+++++|+.+|+.+
T Consensus 191 aEsG~vdivq~Ll~~ga~i 209 (615)
T KOG0508|consen 191 AESGSVDIVQLLLKHGAKI 209 (615)
T ss_pred hhcccHHHHHHHHhCCcee
Confidence 9999999999999999853
No 7
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.78 E-value=5.5e-18 Score=148.61 Aligned_cols=113 Identities=22% Similarity=0.258 Sum_probs=96.1
Q ss_pred cccchhhhcCCchhhhcCCCCchHHHHHHHc---CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHH--CCCHHHHHHHHH
Q 020810 209 DATTSADNAGADEAEEVGNEDESIVHHTASV---GDAEGLKNALAAGADKDEEDSEGRTALHFACG--YGEVKCAQILLE 283 (321)
Q Consensus 209 d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~---g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~--~g~~~~v~~Ll~ 283 (321)
+.+..++..|++.....+..|+||||+|+.. ++.+++++|+++|++++.+|..|+||||+|+. .++.+++++|++
T Consensus 67 eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~ 146 (209)
T PHA02859 67 EILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLID 146 (209)
T ss_pred HHHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHH
Confidence 3445555667665444346899999998864 47999999999999999999999999999876 468999999999
Q ss_pred cCCCCCCccCCCCcHHHH-HHHCCcHHHHHHHHHCCCCC
Q 020810 284 AGANVDALDKNKNTALHY-AAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 284 ~ga~~~~~d~~g~TpLh~-A~~~g~~~iv~~Ll~~GAdv 321 (321)
.|++++.+|..|.||||. |+..++.+++++|+++|+++
T Consensus 147 ~gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi 185 (209)
T PHA02859 147 SGVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDI 185 (209)
T ss_pred cCCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCC
Confidence 999999999999999995 56788999999999999985
No 8
>PHA02791 ankyrin-like protein; Provisional
Probab=99.77 E-value=2.4e-18 Score=157.24 Aligned_cols=109 Identities=23% Similarity=0.255 Sum_probs=85.0
Q ss_pred cccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCC
Q 020810 209 DATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANV 288 (321)
Q Consensus 209 d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~ 288 (321)
+.+..++..+.+.. .. +++||||+|+..|+.++|++|+.+|++++.+|..|+||||+|+..|+.+++++|+++|+++
T Consensus 44 eiv~~Ll~~ga~~n-~~--d~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadi 120 (284)
T PHA02791 44 RLVCTLLNAGALKN-LL--ENEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRL 120 (284)
T ss_pred HHHHHHHHCcCCCc-CC--CCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence 34455555565432 22 3678888888888888888888888888888888888888888888888888888888888
Q ss_pred CCccCCCC-cHHHHHHHCCcHHHHHHHHHCCCC
Q 020810 289 DALDKNKN-TALHYAAGYGRKECVALLLENGAA 320 (321)
Q Consensus 289 ~~~d~~g~-TpLh~A~~~g~~~iv~~Ll~~GAd 320 (321)
+.++..|+ ||||+|+..|+.++|++|+++|++
T Consensus 121 n~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~ 153 (284)
T PHA02791 121 MFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPS 153 (284)
T ss_pred CccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCc
Confidence 88887775 788888888888888888887653
No 9
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.77 E-value=1.8e-18 Score=166.42 Aligned_cols=158 Identities=27% Similarity=0.276 Sum_probs=122.6
Q ss_pred hcCCCCchhHHHHHHHHhhcCCChhHHHHHHHcCChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcC
Q 020810 147 SLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVG 226 (321)
Q Consensus 147 ~l~dp~~~~~~~~~~~~l~~~p~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d 226 (321)
.+..+.+.+++++....+...-.-....+. +.-+..+.+...+..++.++|. ..+++++..-+
T Consensus 47 ~~v~A~q~G~l~~v~~lve~~g~~v~~~D~-~g~tlLHWAAiNNrl~v~r~li----------------~~gadvn~~gG 109 (600)
T KOG0509|consen 47 DIVKATQYGELETVKELVESEGESVNNPDR-EGVTLLHWAAINNRLDVARYLI----------------SHGADVNAIGG 109 (600)
T ss_pred hhhhHhhcchHHHHHHHHhhcCcCCCCCCc-CCccceeHHHHcCcHHHHHHHH----------------HcCCCccccCC
Confidence 345555666666655544441111111111 3336677888888888877775 44555544445
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCC
Q 020810 227 NEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYG 306 (321)
Q Consensus 227 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g 306 (321)
.-+.|||||||++|++.+|.+|+++|+|++.+|..|.||||+|+.+++.-+|-||+..|++++.+|.+|+||||||+..|
T Consensus 110 ~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg 189 (600)
T KOG0509|consen 110 VLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKG 189 (600)
T ss_pred CCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhc
Confidence 77889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHCCCCC
Q 020810 307 RKECVALLLENGAAV 321 (321)
Q Consensus 307 ~~~iv~~Ll~~GAdv 321 (321)
+...++.||+.|+++
T Consensus 190 ~~~~v~~LL~f~a~~ 204 (600)
T KOG0509|consen 190 FALFVRRLLKFGASL 204 (600)
T ss_pred ccHHHHHHHHhcccc
Confidence 988899999998864
No 10
>PHA02791 ankyrin-like protein; Provisional
Probab=99.77 E-value=8.9e-18 Score=153.46 Aligned_cols=108 Identities=14% Similarity=0.129 Sum_probs=93.9
Q ss_pred cchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC-cHHHHHHHCCCHHHHHHHHHcCCCCC
Q 020810 211 TTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGR-TALHFACGYGEVKCAQILLEAGANVD 289 (321)
Q Consensus 211 ~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~-TpLh~A~~~g~~~~v~~Ll~~ga~~~ 289 (321)
+..++..|.+ ++.+|..|+||||+||..|+.+++++|+++|++++.++..|+ ||||+|+..|+.++|++|++++.+.
T Consensus 77 V~lLL~~Gad-vn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~- 154 (284)
T PHA02791 77 VKILLFSGMD-DSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST- 154 (284)
T ss_pred HHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc-
Confidence 3444455544 366788999999999999999999999999999999998885 8999999999999999999987644
Q ss_pred Ccc-CCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 290 ALD-KNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 290 ~~d-~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
.| ..|+||||+|+..|+.++|++|+++||++
T Consensus 155 -~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~ 186 (284)
T PHA02791 155 -FDLAILLSCIHITIKNGHVDMMILLLDYMTST 186 (284)
T ss_pred -cccccCccHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 23 35899999999999999999999999985
No 11
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.76 E-value=4.7e-18 Score=141.71 Aligned_cols=100 Identities=24% Similarity=0.256 Sum_probs=92.6
Q ss_pred hhhcCCCCchHHHHHHHcCCHH---HHHHHHHcCCCCCCCC-CCCCcHHHHHHHCCCHHHHHHHHH-cCCCCCCccCCCC
Q 020810 222 AEEVGNEDESIVHHTASVGDAE---GLKNALAAGADKDEED-SEGRTALHFACGYGEVKCAQILLE-AGANVDALDKNKN 296 (321)
Q Consensus 222 ~~~~d~~g~t~Lh~Aa~~g~~~---~v~~Ll~~g~~~~~~d-~~g~TpLh~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~ 296 (321)
....|..|+||||+|+..|+.+ ++++|++.|++++.++ ..|+||||+|+..++.+++++|+. .|++++.+|..|+
T Consensus 48 ~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~ 127 (154)
T PHA02736 48 VLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFK 127 (154)
T ss_pred HHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCC
Confidence 3456889999999999999874 6889999999999998 589999999999999999999998 4999999999999
Q ss_pred cHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 297 TALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 297 TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
||||+|+..|+.+++++|+.+||++
T Consensus 128 tpL~~A~~~~~~~i~~~Ll~~ga~~ 152 (154)
T PHA02736 128 TPYYVACERHDAKMMNILRAKGAQC 152 (154)
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999999999974
No 12
>PHA02741 hypothetical protein; Provisional
Probab=99.76 E-value=1.2e-17 Score=141.60 Aligned_cols=129 Identities=19% Similarity=0.190 Sum_probs=107.2
Q ss_pred CChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCC----HHHHHHHHHcCCCC
Q 020810 180 GGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGD----AEGLKNALAAGADK 255 (321)
Q Consensus 180 g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~----~~~v~~Ll~~g~~~ 255 (321)
.++.+.+...++.++++.+...... ... ...++.+|..|+||||+|+..|+ .+++++|+.+|+++
T Consensus 22 ~t~Lh~Aa~~g~~~~v~~l~~~~~~----------~~~-ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadi 90 (169)
T PHA02741 22 ENFFHEAARCGCFDIIARFTPFIRG----------DCH-AAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADI 90 (169)
T ss_pred CCHHHHHHHcCCHHHHHHHHHHhcc----------chh-hhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCC
Confidence 3566777777777777766432100 001 12346778899999999999999 58999999999999
Q ss_pred CCCCC-CCCcHHHHHHHCCCHHHHHHHHH-cCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCC
Q 020810 256 DEEDS-EGRTALHFACGYGEVKCAQILLE-AGANVDALDKNKNTALHYAAGYGRKECVALLLENGA 319 (321)
Q Consensus 256 ~~~d~-~g~TpLh~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GA 319 (321)
+.++. .|+||||+|+..++.+++++|+. .|++++..|..|+||||+|+..++.+++++|+++++
T Consensus 91 n~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~ 156 (169)
T PHA02741 91 NAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVA 156 (169)
T ss_pred CCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHH
Confidence 99985 89999999999999999999998 599999999999999999999999999999998765
No 13
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.75 E-value=1.6e-17 Score=161.06 Aligned_cols=140 Identities=26% Similarity=0.373 Sum_probs=116.4
Q ss_pred ChHHHHHHhCChhHHHHHHHHhcc-------ccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCC
Q 020810 181 GPSAMMKYWNDKDVLQKLGEAMGL-------AVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGA 253 (321)
Q Consensus 181 ~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~ 253 (321)
.+...+...++.++++.|.+.-.. ....+.+..++..|.+ .+..+..|.||||+|+..|+.++|++|++.|+
T Consensus 70 t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d-~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga 148 (434)
T PHA02874 70 HPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGID-VNIKDAELKTFLHYAIKKGDLESIKMLFEYGA 148 (434)
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCC-CCCCCCCCccHHHHHHHCCCHHHHHHHHhCCC
Confidence 456666667777777777654110 0011233444455554 45678899999999999999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 254 DKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 254 ~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
+++.+|..|.||||+|+..++.+++++|++.|++++..|..|+||||+|+..|+.++|++|+++|+++
T Consensus 149 d~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i 216 (434)
T PHA02874 149 DVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHI 216 (434)
T ss_pred CCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999874
No 14
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.75 E-value=4.8e-18 Score=163.61 Aligned_cols=101 Identities=30% Similarity=0.436 Sum_probs=96.0
Q ss_pred hhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHH
Q 020810 221 EAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEED-SEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTAL 299 (321)
Q Consensus 221 ~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d-~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL 299 (321)
.++..|.+|.|+|||||.+++++++++||++|+++|..+ .-+.||||||+++|+..+|.+|+++|||++.+|..|.|||
T Consensus 70 ~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~l 149 (600)
T KOG0509|consen 70 SVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLTPL 149 (600)
T ss_pred CCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCcHH
Confidence 345667899999999999999999999999999999988 7789999999999999999999999999999999999999
Q ss_pred HHHHHCCcHHHHHHHHHCCCCC
Q 020810 300 HYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 300 h~A~~~g~~~iv~~Ll~~GAdv 321 (321)
|+|+..|+.-+|-|||.+|+|+
T Consensus 150 Hla~~~~~~~~vayll~~~~d~ 171 (600)
T KOG0509|consen 150 HLAAQFGHTALVAYLLSKGADI 171 (600)
T ss_pred HHHHHhCchHHHHHHHHhcccC
Confidence 9999999999999999999885
No 15
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.75 E-value=1.8e-17 Score=159.51 Aligned_cols=125 Identities=29% Similarity=0.401 Sum_probs=110.0
Q ss_pred CChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 020810 180 GGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEED 259 (321)
Q Consensus 180 g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d 259 (321)
.+|.+.+...++.++++.|.+ .|++ .+..+..|.||||+|+..|+.+++++|+++|++++.+|
T Consensus 103 ~tpL~~A~~~~~~~iv~~Ll~----------------~gad-~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d 165 (413)
T PHA02875 103 MTPLHLATILKKLDIMKLLIA----------------RGAD-PDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIED 165 (413)
T ss_pred CCHHHHHHHhCCHHHHHHHHh----------------CCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCC
Confidence 356677777777777776643 3333 35567889999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCC-cHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 260 SEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKN-TALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 260 ~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~-TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
..|+||||+|+..|+.+++++|+++|++++..+..|. ||+|+|+..|+.++|++|+++|||+
T Consensus 166 ~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~ 228 (413)
T PHA02875 166 CCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADC 228 (413)
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCc
Confidence 9999999999999999999999999999999988875 8999999999999999999999985
No 16
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.74 E-value=2.1e-18 Score=146.53 Aligned_cols=104 Identities=26% Similarity=0.293 Sum_probs=99.5
Q ss_pred CCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCc
Q 020810 218 GADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNT 297 (321)
Q Consensus 218 ~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~T 297 (321)
....++..|+.|.|||.||+.+|++.+|++||+.|++++...++..|+|.+|++.|..++|++|+.++.|+|..|.+|-|
T Consensus 149 ~~n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgT 228 (296)
T KOG0502|consen 149 VNNKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGT 228 (296)
T ss_pred hhccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCc
Confidence 33456788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 298 ALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 298 pLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
||-||++.+|.+||+.||+.||++
T Consensus 229 pLlyAvrgnhvkcve~Ll~sGAd~ 252 (296)
T KOG0502|consen 229 PLLYAVRGNHVKCVESLLNSGADV 252 (296)
T ss_pred eeeeeecCChHHHHHHHHhcCCCc
Confidence 999999999999999999999986
No 17
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.74 E-value=1.3e-17 Score=163.63 Aligned_cols=111 Identities=32% Similarity=0.358 Sum_probs=93.5
Q ss_pred ccchhhhcCCchhhhcCCC-CchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCC
Q 020810 210 ATTSADNAGADEAEEVGNE-DESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANV 288 (321)
Q Consensus 210 ~~~~~~~~~~~~~~~~d~~-g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~ 288 (321)
.+..+...|++. +..+.. |+||||+||..|+.+++++|++.|++++..|..|+||||+|+..++.+++++|++.|+++
T Consensus 149 iv~~Ll~~gadi-n~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~i 227 (477)
T PHA02878 149 ITKLLLSYGADI-NMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGAST 227 (477)
T ss_pred HHHHHHHcCCCC-CccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCC
Confidence 344455556654 455555 899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCcHHHHHHHC-CcHHHHHHHHHCCCCC
Q 020810 289 DALDKNKNTALHYAAGY-GRKECVALLLENGAAV 321 (321)
Q Consensus 289 ~~~d~~g~TpLh~A~~~-g~~~iv~~Ll~~GAdv 321 (321)
+.+|..|+||||+|+.. ++.+++++|+++|++|
T Consensus 228 n~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadv 261 (477)
T PHA02878 228 DARDKCGNTPLHISVGYCKDYDILKLLLEHGVDV 261 (477)
T ss_pred CCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCC
Confidence 99999999999999865 6889999999999875
No 18
>PHA02741 hypothetical protein; Provisional
Probab=99.74 E-value=1.7e-17 Score=140.63 Aligned_cols=100 Identities=25% Similarity=0.324 Sum_probs=90.7
Q ss_pred hhhcCCCCchHHHHHHHcCCHHHHHHHHH------cCCCCCCCCCCCCcHHHHHHHCCC----HHHHHHHHHcCCCCCCc
Q 020810 222 AEEVGNEDESIVHHTASVGDAEGLKNALA------AGADKDEEDSEGRTALHFACGYGE----VKCAQILLEAGANVDAL 291 (321)
Q Consensus 222 ~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~------~g~~~~~~d~~g~TpLh~A~~~g~----~~~v~~Ll~~ga~~~~~ 291 (321)
++.++..|.|+||+||..|+.++++.|+. .|++++.+|..|+||||+|+..|+ .+++++|+++|++++.+
T Consensus 14 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~ 93 (169)
T PHA02741 14 IAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQ 93 (169)
T ss_pred hhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCC
Confidence 34567889999999999999999999854 368899999999999999999999 58999999999999999
Q ss_pred cC-CCCcHHHHHHHCCcHHHHHHHHH-CCCCC
Q 020810 292 DK-NKNTALHYAAGYGRKECVALLLE-NGAAV 321 (321)
Q Consensus 292 d~-~g~TpLh~A~~~g~~~iv~~Ll~-~GAdv 321 (321)
+. .|+||||+|+..++.+++++|+. .|+++
T Consensus 94 ~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~ 125 (169)
T PHA02741 94 EMLEGDTALHLAAHRRDHDLAEWLCCQPGIDL 125 (169)
T ss_pred CcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC
Confidence 85 99999999999999999999997 58875
No 19
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.72 E-value=5.2e-17 Score=168.99 Aligned_cols=111 Identities=28% Similarity=0.287 Sum_probs=96.6
Q ss_pred ccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCC----------------
Q 020810 210 ATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYG---------------- 273 (321)
Q Consensus 210 ~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g---------------- 273 (321)
.+..++..|.+ .+..|..|+||||+||..|+.+++++|+++|++++.+|.+|+||||+|+..|
T Consensus 540 ~l~~Ll~~G~d-~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~ 618 (823)
T PLN03192 540 LLEELLKAKLD-PDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISD 618 (823)
T ss_pred HHHHHHHCCCC-CCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccC
Confidence 34445555655 4678999999999999999999999999999999999999999988665544
Q ss_pred ---------------CHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 274 ---------------EVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 274 ---------------~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
+.+++++|+++|++++.+|.+|+||||+|+..|+.++|++|+++|||+
T Consensus 619 ~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv 681 (823)
T PLN03192 619 PHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADV 681 (823)
T ss_pred cccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCC
Confidence 555667788899999999999999999999999999999999999986
No 20
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.71 E-value=7.3e-17 Score=141.47 Aligned_cols=122 Identities=20% Similarity=0.254 Sum_probs=103.8
Q ss_pred CChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcC--CHHHHHHHHHcCCCCCC
Q 020810 180 GGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVG--DAEGLKNALAAGADKDE 257 (321)
Q Consensus 180 g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g--~~~~v~~Ll~~g~~~~~ 257 (321)
.+|...+...++.+.++.|.+. .+..+..|.||||+|+..+ +.+++++|+++|++++.
T Consensus 22 ~~pL~~A~~~~~~~~vk~Li~~--------------------~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~ 81 (209)
T PHA02859 22 CNPLFYYVEKDDIEGVKKWIKF--------------------VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNF 81 (209)
T ss_pred CcHHHHHHHhCcHHHHHHHHHh--------------------hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCc
Confidence 3566667767777777776532 2445788999999999854 89999999999999999
Q ss_pred CC-CCCCcHHHHHHHC---CCHHHHHHHHHcCCCCCCccCCCCcHHHHHHH--CCcHHHHHHHHHCCCCC
Q 020810 258 ED-SEGRTALHFACGY---GEVKCAQILLEAGANVDALDKNKNTALHYAAG--YGRKECVALLLENGAAV 321 (321)
Q Consensus 258 ~d-~~g~TpLh~A~~~---g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~--~g~~~iv~~Ll~~GAdv 321 (321)
++ ..|+||||+|+.. ++.+++++|+++|++++.+|..|.||||+|+. .++.+++++|+++|+++
T Consensus 82 ~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadi 151 (209)
T PHA02859 82 KTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSF 151 (209)
T ss_pred cCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCc
Confidence 97 5899999998764 47999999999999999999999999999976 46899999999999985
No 21
>PHA02795 ankyrin-like protein; Provisional
Probab=99.71 E-value=1e-16 Score=152.70 Aligned_cols=94 Identities=27% Similarity=0.207 Sum_probs=90.1
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCC-
Q 020810 228 EDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYG- 306 (321)
Q Consensus 228 ~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g- 306 (321)
.+.+++|.|+..++.+++++|+.+|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 187 ~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~ 266 (437)
T PHA02795 187 IQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGS 266 (437)
T ss_pred hccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCC
Confidence 4778999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred -------cHHHHHHHHHCCCCC
Q 020810 307 -------RKECVALLLENGAAV 321 (321)
Q Consensus 307 -------~~~iv~~Ll~~GAdv 321 (321)
+.+++++|+++|+++
T Consensus 267 ~~~~~~~~~eIvelLL~~gadI 288 (437)
T PHA02795 267 VIARRETHLKILEILLREPLSI 288 (437)
T ss_pred cccccccHHHHHHHHHhCCCCC
Confidence 479999999999975
No 22
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.71 E-value=1.4e-16 Score=156.31 Aligned_cols=123 Identities=28% Similarity=0.336 Sum_probs=107.2
Q ss_pred CChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 020810 180 GGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEED 259 (321)
Q Consensus 180 g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d 259 (321)
.+|.+.+...++.++++.|.+ .|++ .+..|..|+||||+|+..|+.+++++|++.|++++.+|
T Consensus 169 ~tpLh~A~~~~~~~iv~~Ll~----------------~gad-~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d 231 (477)
T PHA02878 169 NTALHYATENKDQRLTELLLS----------------YGAN-VNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARD 231 (477)
T ss_pred CCHHHHHHhCCCHHHHHHHHH----------------CCCC-CCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCC
Confidence 467777777777777777653 3333 35678899999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHC-CCHHHHHHHHHcCCCCCCccC-CCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 260 SEGRTALHFACGY-GEVKCAQILLEAGANVDALDK-NKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 260 ~~g~TpLh~A~~~-g~~~~v~~Ll~~ga~~~~~d~-~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
..|+||||+|+.. ++.+++++|+++|++++.++. .|.||||+| .++.+++++|+++|||+
T Consensus 232 ~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadi 293 (477)
T PHA02878 232 KCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSS--IKSERKLKLLLEYGADI 293 (477)
T ss_pred CCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCC
Confidence 9999999999976 789999999999999999886 799999999 57889999999999986
No 23
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.71 E-value=1.2e-16 Score=156.60 Aligned_cols=106 Identities=23% Similarity=0.357 Sum_probs=99.5
Q ss_pred hhcCCchhhhcCCCCchHHHHHH--HcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCC--CHHHHHHHHHcCCCCCC
Q 020810 215 DNAGADEAEEVGNEDESIVHHTA--SVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYG--EVKCAQILLEAGANVDA 290 (321)
Q Consensus 215 ~~~~~~~~~~~d~~g~t~Lh~Aa--~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g--~~~~v~~Ll~~ga~~~~ 290 (321)
+..|++. +..+..|.||||+|+ ..|+.+++++|+++|++++..+..|.||||+|+..+ +.+++++|+++|++++.
T Consensus 93 l~~ga~i-~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~ 171 (480)
T PHA03100 93 LEYGANV-NAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINA 171 (480)
T ss_pred HHCCCCC-CCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCccc
Confidence 3445555 677889999999999 999999999999999999999999999999999999 99999999999999999
Q ss_pred ccCCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 291 LDKNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 291 ~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
+|..|.||||+|+..|+.+++++|+++|+++
T Consensus 172 ~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~ 202 (480)
T PHA03100 172 KNRYGYTPLHIAVEKGNIDVIKFLLDNGADI 202 (480)
T ss_pred ccCCCCCHHHHHHHhCCHHHHHHHHHcCCCc
Confidence 9999999999999999999999999999975
No 24
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.71 E-value=2e-16 Score=153.41 Aligned_cols=125 Identities=25% Similarity=0.327 Sum_probs=108.4
Q ss_pred CChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCC------
Q 020810 180 GGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGA------ 253 (321)
Q Consensus 180 g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~------ 253 (321)
.++.+.+...++.+++++|.+ .|++ .+..+..|.||||+|+..|+.+++++|+++|+
T Consensus 36 ~tpL~~A~~~g~~~iv~~Ll~----------------~Ga~-~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~ 98 (434)
T PHA02874 36 TTPLIDAIRSGDAKIVELFIK----------------HGAD-INHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILP 98 (434)
T ss_pred CCHHHHHHHcCCHHHHHHHHH----------------CCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcch
Confidence 467777777888888877753 2333 34567789999999999999999999987764
Q ss_pred -----------------CCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHH
Q 020810 254 -----------------DKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLE 316 (321)
Q Consensus 254 -----------------~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~ 316 (321)
+++.++..|.||||+|+..|+.++|++|+++|++++.+|..|.||||+|+..|+.+++++|++
T Consensus 99 ~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~ 178 (434)
T PHA02874 99 IPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLE 178 (434)
T ss_pred hccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHH
Confidence 456778899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC
Q 020810 317 NGAAV 321 (321)
Q Consensus 317 ~GAdv 321 (321)
+|+++
T Consensus 179 ~g~~~ 183 (434)
T PHA02874 179 KGAYA 183 (434)
T ss_pred CCCCC
Confidence 99874
No 25
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.70 E-value=2.3e-16 Score=159.73 Aligned_cols=106 Identities=20% Similarity=0.213 Sum_probs=93.5
Q ss_pred hhcCCchhhhcCCCCchHHHHHHHcCC--HHHHHHHHHcCCCCCCCCCCCCcHHHHH-----------------------
Q 020810 215 DNAGADEAEEVGNEDESIVHHTASVGD--AEGLKNALAAGADKDEEDSEGRTALHFA----------------------- 269 (321)
Q Consensus 215 ~~~~~~~~~~~d~~g~t~Lh~Aa~~g~--~~~v~~Ll~~g~~~~~~d~~g~TpLh~A----------------------- 269 (321)
+..|++ ++..|..|.||||+|+..|+ .++|++||++|++++.+|..|+||||+|
T Consensus 199 Le~GAD-VN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~ 277 (764)
T PHA02716 199 CNNGVN-VNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNK 277 (764)
T ss_pred HHcCCC-CCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccc
Confidence 344544 46678899999999999995 5899999999999999999999999975
Q ss_pred --------------HHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHH--CCcHHHHHHHHHCCCCC
Q 020810 270 --------------CGYGEVKCAQILLEAGANVDALDKNKNTALHYAAG--YGRKECVALLLENGAAV 321 (321)
Q Consensus 270 --------------~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~--~g~~~iv~~Ll~~GAdv 321 (321)
+..|+.+++++|++.|++++.+|..|+||||+|+. .++.++|++|+++||++
T Consensus 278 ~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADI 345 (764)
T PHA02716 278 VKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDL 345 (764)
T ss_pred cccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCC
Confidence 34578899999999999999999999999999864 56899999999999986
No 26
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.70 E-value=1.5e-16 Score=145.71 Aligned_cols=107 Identities=20% Similarity=0.212 Sum_probs=64.9
Q ss_pred cccchhhhcCCchhhh---cCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCC-CCCCCcHHHHHHHCCCHHHHHHHHHc
Q 020810 209 DATTSADNAGADEAEE---VGNEDESIVHHTASVGDAEGLKNALAAGADKDEE-DSEGRTALHFACGYGEVKCAQILLEA 284 (321)
Q Consensus 209 d~~~~~~~~~~~~~~~---~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~-d~~g~TpLh~A~~~g~~~~v~~Ll~~ 284 (321)
+.+..++..|++.... .+..|.||||+|+..++.+++++|+++|++++.. +..|.||||+|+..++.+++++|+..
T Consensus 47 eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~~~~eivklLL~~ 126 (300)
T PHA02884 47 DIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLHGCLKCLEILLSY 126 (300)
T ss_pred HHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 4555555666554322 1345666666666666666666666666666654 34566666666666666666666666
Q ss_pred CCCCCCccCCCCcHHHHHHHCCcHHHHHHHH
Q 020810 285 GANVDALDKNKNTALHYAAGYGRKECVALLL 315 (321)
Q Consensus 285 ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll 315 (321)
|++++.+|..|+||||+|+..++.+++.++.
T Consensus 127 GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~ 157 (300)
T PHA02884 127 GADINIQTNDMVTPIELALMICNNFLAFMIC 157 (300)
T ss_pred CCCCCCCCCCCCCHHHHHHHhCChhHHHHhc
Confidence 6666666666666666666666666554443
No 27
>PHA03095 ankyrin-like protein; Provisional
Probab=99.69 E-value=1.2e-16 Score=155.99 Aligned_cols=112 Identities=30% Similarity=0.283 Sum_probs=82.6
Q ss_pred cccchhhhcCCchhhhcCCCCchHHHHHHHcC-CHHHHHHHHHcCCCCCCCCCCCCcHHHHHH--HCCCHHHHHHHHHcC
Q 020810 209 DATTSADNAGADEAEEVGNEDESIVHHTASVG-DAEGLKNALAAGADKDEEDSEGRTALHFAC--GYGEVKCAQILLEAG 285 (321)
Q Consensus 209 d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g-~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~--~~g~~~~v~~Ll~~g 285 (321)
+.+..++..|++. +..+..|+||||+|+..| +.+++++|+++|++++.+|..|+||||+|+ ..++.+++++|+++|
T Consensus 64 ~iv~~Ll~~Gadi-n~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~g 142 (471)
T PHA03095 64 DIVRLLLEAGADV-NAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKG 142 (471)
T ss_pred HHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcC
Confidence 4555666666553 555667788888888887 477888888888888877777888888877 445677888888888
Q ss_pred CCCCCccCCCCcHHHHHHHCC--cHHHHHHHHHCCCCC
Q 020810 286 ANVDALDKNKNTALHYAAGYG--RKECVALLLENGAAV 321 (321)
Q Consensus 286 a~~~~~d~~g~TpLh~A~~~g--~~~iv~~Ll~~GAdv 321 (321)
++++.+|..|.||||+|+..+ +.+++++|+++|+++
T Consensus 143 ad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~ 180 (471)
T PHA03095 143 ADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADV 180 (471)
T ss_pred CCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCC
Confidence 888877778888888777654 567788888877764
No 28
>PHA02798 ankyrin-like protein; Provisional
Probab=99.69 E-value=2.3e-16 Score=155.32 Aligned_cols=112 Identities=27% Similarity=0.318 Sum_probs=94.3
Q ss_pred cccchhhhcCCchhhhcCCCCchHHHHHHHc-----CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCC---CHHHHHH
Q 020810 209 DATTSADNAGADEAEEVGNEDESIVHHTASV-----GDAEGLKNALAAGADKDEEDSEGRTALHFACGYG---EVKCAQI 280 (321)
Q Consensus 209 d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~-----g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g---~~~~v~~ 280 (321)
+.+..++..|++ ++..+..|.||||+++.. +..+++++|+++|++++.+|..|+||||+|+..+ +.+++++
T Consensus 52 ~iv~~Ll~~Gad-vn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~ 130 (489)
T PHA02798 52 DIVKLFINLGAN-VNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLF 130 (489)
T ss_pred HHHHHHHHCCCC-CCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHH
Confidence 344555566665 456778899999988754 6689999999999999999999999999999875 6889999
Q ss_pred HHHcCCCCCCccCCCCcHHHHHHHCCc---HHHHHHHHHCCCCC
Q 020810 281 LLEAGANVDALDKNKNTALHYAAGYGR---KECVALLLENGAAV 321 (321)
Q Consensus 281 Ll~~ga~~~~~d~~g~TpLh~A~~~g~---~~iv~~Ll~~GAdv 321 (321)
|+++|++++.+|..|.||||+|+..++ .+++++|+++|+++
T Consensus 131 Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadi 174 (489)
T PHA02798 131 MIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDI 174 (489)
T ss_pred HHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCc
Confidence 999999999999999999999999887 89999999999875
No 29
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.69 E-value=3.2e-16 Score=153.53 Aligned_cols=124 Identities=30% Similarity=0.346 Sum_probs=106.2
Q ss_pred ChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCC------chHHHHHHHcCC--HHHHHHHHHcC
Q 020810 181 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNED------ESIVHHTASVGD--AEGLKNALAAG 252 (321)
Q Consensus 181 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g------~t~Lh~Aa~~g~--~~~v~~Ll~~g 252 (321)
+|.+.+...++.++++.|. ..|++. +..+..| .||||+|+..|+ .+++++|++.|
T Consensus 178 tpL~~A~~~~~~~iv~~Ll----------------~~ga~~-~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g 240 (480)
T PHA03100 178 TPLHIAVEKGNIDVIKFLL----------------DNGADI-NAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYG 240 (480)
T ss_pred CHHHHHHHhCCHHHHHHHH----------------HcCCCc-cCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcC
Confidence 4555555555555555553 334433 3445556 899999999999 99999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 253 ADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 253 ~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
++++.+|..|+||||+|+..++.+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|+++
T Consensus 241 ~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~~i 309 (480)
T PHA03100 241 VPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSI 309 (480)
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHhCCHHHHHHHHhcCCCH
Confidence 999999999999999999999999999999999999999999999999999999999999999999975
No 30
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.69 E-value=4.9e-17 Score=143.24 Aligned_cols=101 Identities=30% Similarity=0.376 Sum_probs=96.4
Q ss_pred hhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHH
Q 020810 221 EAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALH 300 (321)
Q Consensus 221 ~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh 300 (321)
+.+.-|..|.+||||||+.|+..+|+.||..|+.+|..+....||||+|+..||.++|+.|+++.+|+|..+..|+||||
T Consensus 26 dln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgntplh 105 (448)
T KOG0195|consen 26 DLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTPLH 105 (448)
T ss_pred ccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCCCchh
Confidence 34666889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCcHHHHHHHHHCCCCC
Q 020810 301 YAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 301 ~A~~~g~~~iv~~Ll~~GAdv 321 (321)
|||..|+..+++-|+..||.|
T Consensus 106 yacfwgydqiaedli~~ga~v 126 (448)
T KOG0195|consen 106 YACFWGYDQIAEDLISCGAAV 126 (448)
T ss_pred hhhhhcHHHHHHHHHhcccee
Confidence 999999999999999999864
No 31
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.68 E-value=1.9e-16 Score=133.88 Aligned_cols=99 Identities=22% Similarity=0.309 Sum_probs=87.9
Q ss_pred hhcCCCCchHHHHHHHcCCH----HHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHH---HHHHHHcCCCCCCcc-CC
Q 020810 223 EEVGNEDESIVHHTASVGDA----EGLKNALAAGADKDEEDSEGRTALHFACGYGEVKC---AQILLEAGANVDALD-KN 294 (321)
Q Consensus 223 ~~~d~~g~t~Lh~Aa~~g~~----~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~---v~~Ll~~ga~~~~~d-~~ 294 (321)
+..+.++.++||+||..|++ +++++|++.|..++.+|..|+||||+|+.+|+.++ +++|+..|++++.++ ..
T Consensus 14 ~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~ 93 (166)
T PHA02743 14 VEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGT 93 (166)
T ss_pred hhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCC
Confidence 34456788999999999998 56667888999999999999999999999988654 899999999999998 58
Q ss_pred CCcHHHHHHHCCcHHHHHHHHH-CCCCC
Q 020810 295 KNTALHYAAGYGRKECVALLLE-NGAAV 321 (321)
Q Consensus 295 g~TpLh~A~~~g~~~iv~~Ll~-~GAdv 321 (321)
|+||||+|+..|+.+++++|+. .|+++
T Consensus 94 g~TpLh~A~~~g~~~iv~~Ll~~~gad~ 121 (166)
T PHA02743 94 GNTLLHIAASTKNYELAEWLCRQLGVNL 121 (166)
T ss_pred CCcHHHHHHHhCCHHHHHHHHhccCCCc
Confidence 9999999999999999999995 79875
No 32
>PHA02946 ankyin-like protein; Provisional
Probab=99.68 E-value=3.2e-16 Score=152.35 Aligned_cols=108 Identities=17% Similarity=0.277 Sum_probs=87.0
Q ss_pred chhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCC--HHHHHHHHHcCCCCC
Q 020810 212 TSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGE--VKCAQILLEAGANVD 289 (321)
Q Consensus 212 ~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~--~~~v~~Ll~~ga~~~ 289 (321)
..++..|.+ ++.+|..|+||||+||..|+.++|++||++|++++.+|..|+||||+|+..++ .+++++|+++|++++
T Consensus 56 ~~Ll~~Gad-vn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin 134 (446)
T PHA02946 56 EELLHRGYS-PNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKIN 134 (446)
T ss_pred HHHHHCcCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcc
Confidence 334455555 46778899999999999999999999999999999999999999999987664 788899999998888
Q ss_pred C-ccCCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 290 A-LDKNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 290 ~-~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
. .|..|.|||| |+..|+.+++++|+++|+++
T Consensus 135 ~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~ 166 (446)
T PHA02946 135 NSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEA 166 (446)
T ss_pred cccCCCCCcHHH-HHHCCChHHHHHHHhccccc
Confidence 4 5777788886 55567777777777777653
No 33
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.68 E-value=1.1e-16 Score=131.54 Aligned_cols=104 Identities=31% Similarity=0.452 Sum_probs=93.7
Q ss_pred hhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCcc
Q 020810 213 SADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALD 292 (321)
Q Consensus 213 ~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d 292 (321)
.++...++.++.+|.+|.||||.|+..|++++|+.|+..|++++.+...||||||-||.-.+.+|+..|+++|+|||...
T Consensus 81 ~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqhgaDVnA~t 160 (228)
T KOG0512|consen 81 RLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGADVNAQT 160 (228)
T ss_pred HHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhHHHHHHhccCcccccc
Confidence 34455667778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHCCc-HHHHHHHHH
Q 020810 293 KNKNTALHYAAGYGR-KECVALLLE 316 (321)
Q Consensus 293 ~~g~TpLh~A~~~g~-~~iv~~Ll~ 316 (321)
...+||||.|+...+ ...+++|+.
T Consensus 161 ~g~ltpLhlaa~~rn~r~t~~~Ll~ 185 (228)
T KOG0512|consen 161 KGLLTPLHLAAGNRNSRDTLELLLH 185 (228)
T ss_pred cccchhhHHhhcccchHHHHHHHhh
Confidence 999999999997655 456677664
No 34
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.68 E-value=3.5e-16 Score=158.37 Aligned_cols=115 Identities=17% Similarity=0.098 Sum_probs=97.4
Q ss_pred CCcccchhhhcC-CchhhhcCCCCchHHHHHHH--cCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCC--HHHHHHH
Q 020810 207 GGDATTSADNAG-ADEAEEVGNEDESIVHHTAS--VGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGE--VKCAQIL 281 (321)
Q Consensus 207 ~~d~~~~~~~~~-~~~~~~~d~~g~t~Lh~Aa~--~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~--~~~v~~L 281 (321)
..+.+..++..| ++.....+..|.||||+|+. +++.++|++|+++|++++.+|..|+||||+|+..|+ .++|++|
T Consensus 154 ~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklL 233 (764)
T PHA02716 154 DLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKI 233 (764)
T ss_pred CHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHH
Confidence 334566677777 55433338889999999864 468999999999999999999999999999999995 5899999
Q ss_pred HHcCCCCCCccCCCCcHHHHH-------------------------------------HHCCcHHHHHHHHHCCCCC
Q 020810 282 LEAGANVDALDKNKNTALHYA-------------------------------------AGYGRKECVALLLENGAAV 321 (321)
Q Consensus 282 l~~ga~~~~~d~~g~TpLh~A-------------------------------------~~~g~~~iv~~Ll~~GAdv 321 (321)
+++|++++.+|..|+||||+| +..|+.++|++|+++||++
T Consensus 234 Le~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdI 310 (764)
T PHA02716 234 IELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKL 310 (764)
T ss_pred HHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCce
Confidence 999999999999999999975 3457788899999999875
No 35
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.67 E-value=7.5e-16 Score=141.21 Aligned_cols=99 Identities=20% Similarity=0.264 Sum_probs=88.5
Q ss_pred hhcCCCCchH-HHHHHHcCCHHHHHHHHHcCCCCCCCC----CCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCc-cCCCC
Q 020810 223 EEVGNEDESI-VHHTASVGDAEGLKNALAAGADKDEED----SEGRTALHFACGYGEVKCAQILLEAGANVDAL-DKNKN 296 (321)
Q Consensus 223 ~~~d~~g~t~-Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d----~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~-d~~g~ 296 (321)
..+|..++|+ ||.|+..|+.+++++|+++|++++.++ ..|.||||+|+..++.+++++|+++|++++.+ +..|.
T Consensus 26 ~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~ 105 (300)
T PHA02884 26 KKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKI 105 (300)
T ss_pred hccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCC
Confidence 3446666654 677778899999999999999999874 58999999999999999999999999999986 46899
Q ss_pred cHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 297 TALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 297 TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
||||+|+..|+.+++++|+.+||++
T Consensus 106 TpLh~Aa~~~~~eivklLL~~GAdi 130 (300)
T PHA02884 106 TPLYISVLHGCLKCLEILLSYGADI 130 (300)
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 9999999999999999999999985
No 36
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.67 E-value=6.4e-17 Score=146.42 Aligned_cols=99 Identities=31% Similarity=0.425 Sum_probs=88.3
Q ss_pred hhhcCCCCchHHHHHHHcCCHHHHHHHHHcC-CCCCCCCC--------------------------------------CC
Q 020810 222 AEEVGNEDESIVHHTASVGDAEGLKNALAAG-ADKDEEDS--------------------------------------EG 262 (321)
Q Consensus 222 ~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g-~~~~~~d~--------------------------------------~g 262 (321)
++..|.+|+|+|||++..+++++|+.||+.| |+++..++ .|
T Consensus 261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKAsQ~g 340 (452)
T KOG0514|consen 261 VNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKASQHG 340 (452)
T ss_pred hhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchhhhhhc
Confidence 4667889999999999999999999999887 67777765 36
Q ss_pred CcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHC-CCC
Q 020810 263 RTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLEN-GAA 320 (321)
Q Consensus 263 ~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~-GAd 320 (321)
.|+|++|+.+|+.++|+.||..|+|||.+|.+|.|+|++|+.+||.+||++||.. +||
T Consensus 341 QTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd 399 (452)
T KOG0514|consen 341 QTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCD 399 (452)
T ss_pred chhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCccc
Confidence 7888888899999999999999999999999999999999999999999999975 555
No 37
>PHA03095 ankyrin-like protein; Provisional
Probab=99.67 E-value=4.1e-16 Score=152.37 Aligned_cols=108 Identities=20% Similarity=0.295 Sum_probs=97.3
Q ss_pred hhhhcCCchhhhcCCCCchHHHHHHHcCCH--HHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCC
Q 020810 213 SADNAGADEAEEVGNEDESIVHHTASVGDA--EGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDA 290 (321)
Q Consensus 213 ~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~--~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~ 290 (321)
.++..|.+ .+.+|..|+||||+|+..|+. .+++.|+..|++++.+|..|+||||+|+..|+.+++++|++.|++++.
T Consensus 207 ~Ll~~g~~-~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~ 285 (471)
T PHA03095 207 ELIRAGCD-PAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINA 285 (471)
T ss_pred HHHHcCCC-CcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 34444544 366788999999999999875 688899999999999999999999999999999999999999999999
Q ss_pred ccCCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 291 LDKNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 291 ~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
+|..|+||||+|+..|+.+++++|+++++++
T Consensus 286 ~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~~ 316 (471)
T PHA03095 286 VSSDGNTPLSLMVRNNNGRAVRAALAKNPSA 316 (471)
T ss_pred cCCCCCCHHHHHHHhCCHHHHHHHHHhCCCH
Confidence 9999999999999999999999999998763
No 38
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.66 E-value=2.4e-16 Score=116.52 Aligned_cols=88 Identities=35% Similarity=0.563 Sum_probs=73.5
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHH
Q 020810 232 IVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECV 311 (321)
Q Consensus 232 ~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv 311 (321)
-+.|+..+|.++-|+..+..|.++|..- .|++|||||+.+|+++++++|+..|++++.+|..|.|||-.|++.||.+||
T Consensus 5 ~~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cV 83 (117)
T KOG4214|consen 5 SVAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCV 83 (117)
T ss_pred hHhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHH
Confidence 3667888888888888888887776553 788888888888888888888888888888888888888888888888888
Q ss_pred HHHHHCCCC
Q 020810 312 ALLLENGAA 320 (321)
Q Consensus 312 ~~Ll~~GAd 320 (321)
++||+.|||
T Consensus 84 klLL~~GAd 92 (117)
T KOG4214|consen 84 KLLLQNGAD 92 (117)
T ss_pred HHHHHcCcc
Confidence 888888886
No 39
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.65 E-value=1.1e-15 Score=150.39 Aligned_cols=100 Identities=33% Similarity=0.458 Sum_probs=89.4
Q ss_pred hhhcCCCCchHHHHHHHcCCHHHHHHHHH-cC-CCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCC---CccCCCC
Q 020810 222 AEEVGNEDESIVHHTASVGDAEGLKNALA-AG-ADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVD---ALDKNKN 296 (321)
Q Consensus 222 ~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~-~g-~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~---~~d~~g~ 296 (321)
++.++.++.||||+||.+|+..+|+.||+ .| ...+..|..|.||||+|+..||..|+++|+..|+... ..|.+|.
T Consensus 299 I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~ 378 (929)
T KOG0510|consen 299 INSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGN 378 (929)
T ss_pred ccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCc
Confidence 46677889999999999999999999998 44 4567888999999999999999999999999999887 5699999
Q ss_pred cHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 297 TALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 297 TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
||||.|+.+|+..+|++|+.+||+|
T Consensus 379 TaLH~Aa~~g~~~av~~Li~~Ga~I 403 (929)
T KOG0510|consen 379 TALHLAAKYGNTSAVQKLISHGADI 403 (929)
T ss_pred hhhhHHHHhccHHHHHHHHHcCCce
Confidence 9999999999999999999999986
No 40
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.64 E-value=1.3e-15 Score=155.83 Aligned_cols=109 Identities=29% Similarity=0.387 Sum_probs=96.8
Q ss_pred chhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCC-HHHHHHHHHcCCCCCC
Q 020810 212 TSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGE-VKCAQILLEAGANVDA 290 (321)
Q Consensus 212 ~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~-~~~v~~Ll~~ga~~~~ 290 (321)
..+...|.+ ++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++ ..++++|+++|++++.
T Consensus 359 ~lLl~~gad-in~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~ 437 (682)
T PHA02876 359 ITLLELGAN-VNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNS 437 (682)
T ss_pred HHHHHcCCC-CccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCc
Confidence 334444544 46778999999999999999999999999999999999999999999987666 5679999999999999
Q ss_pred ccCCCCcHHHHHHHCC-cHHHHHHHHHCCCCC
Q 020810 291 LDKNKNTALHYAAGYG-RKECVALLLENGAAV 321 (321)
Q Consensus 291 ~d~~g~TpLh~A~~~g-~~~iv~~Ll~~GAdv 321 (321)
+|..|+||||+|+..| +.+++++|+++||++
T Consensus 438 ~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~ 469 (682)
T PHA02876 438 KNKDLSTPLHYACKKNCKLDVIEMLLDNGADV 469 (682)
T ss_pred CCCCCChHHHHHHHhCCcHHHHHHHHHCCCCC
Confidence 9999999999999876 689999999999985
No 41
>PHA02946 ankyin-like protein; Provisional
Probab=99.64 E-value=2.5e-15 Score=146.03 Aligned_cols=97 Identities=19% Similarity=0.268 Sum_probs=71.4
Q ss_pred hhcCCCCchHHHHHHHcC--CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCC--CHHHHHHHHHcCCCCCCccCCCCcH
Q 020810 223 EEVGNEDESIVHHTASVG--DAEGLKNALAAGADKDEEDSEGRTALHFACGYG--EVKCAQILLEAGANVDALDKNKNTA 298 (321)
Q Consensus 223 ~~~d~~g~t~Lh~Aa~~g--~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g--~~~~v~~Ll~~ga~~~~~d~~g~Tp 298 (321)
+..|..|+||||+|+..+ +.+++++|++.|++++.+|..|+||||+|+..+ +.+++++|+. |++++.+|..|+||
T Consensus 167 ~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadin~~d~~G~Tp 245 (446)
T PHA02946 167 RIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLP-STDVNKQNKFGDSP 245 (446)
T ss_pred cccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCCCCCCCCCCCH
Confidence 556677777777776543 357777777778777777777888888877765 6777777774 77777777788888
Q ss_pred HHHHHHCCc-HHHHHHHHHCCCC
Q 020810 299 LHYAAGYGR-KECVALLLENGAA 320 (321)
Q Consensus 299 Lh~A~~~g~-~~iv~~Ll~~GAd 320 (321)
||+|+..++ .+++++|+.+|++
T Consensus 246 Lh~A~~~~~~~~~~~~Ll~~g~~ 268 (446)
T PHA02946 246 LTLLIKTLSPAHLINKLLSTSNV 268 (446)
T ss_pred HHHHHHhCChHHHHHHHHhCCCC
Confidence 888777766 4677777777764
No 42
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.63 E-value=9.8e-16 Score=125.92 Aligned_cols=91 Identities=27% Similarity=0.326 Sum_probs=86.2
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHH
Q 020810 231 SIVHHTASVGDAEGLKNALAAGAD-KDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKE 309 (321)
Q Consensus 231 t~Lh~Aa~~g~~~~v~~Ll~~g~~-~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~ 309 (321)
..+.+|+..+.+..|+.||+..++ +|.+|.+|.||||.|+++||++||+.|+..|++++.+...||||||.||...+.+
T Consensus 65 rl~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~ 144 (228)
T KOG0512|consen 65 RLLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFE 144 (228)
T ss_pred HHHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchh
Confidence 457789999999999999987655 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCC
Q 020810 310 CVALLLENGAAV 321 (321)
Q Consensus 310 iv~~Ll~~GAdv 321 (321)
|+.+||.+||||
T Consensus 145 va~~LLqhgaDV 156 (228)
T KOG0512|consen 145 VAGRLLQHGADV 156 (228)
T ss_pred HHHHHHhccCcc
Confidence 999999999997
No 43
>PHA02917 ankyrin-like protein; Provisional
Probab=99.63 E-value=1.6e-15 Score=153.41 Aligned_cols=100 Identities=18% Similarity=0.209 Sum_probs=82.0
Q ss_pred hhhcCCCCchHHHHHHHc---CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCC-------------------------
Q 020810 222 AEEVGNEDESIVHHTASV---GDAEGLKNALAAGADKDEEDSEGRTALHFACGYG------------------------- 273 (321)
Q Consensus 222 ~~~~d~~g~t~Lh~Aa~~---g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g------------------------- 273 (321)
++.+|.+|+||||+||.. |+.++|++||++|++++..+..|+||||+|+..|
T Consensus 25 ~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~~~ 104 (661)
T PHA02917 25 NDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNINDFN 104 (661)
T ss_pred ccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCCcc
Confidence 356677788888886554 6788888888888888888888888888776543
Q ss_pred ----------CHHHHHHHHHcCCCCCCccCCCCcHHHHH--HHCCcHHHHHHHHHCCCCC
Q 020810 274 ----------EVKCAQILLEAGANVDALDKNKNTALHYA--AGYGRKECVALLLENGAAV 321 (321)
Q Consensus 274 ----------~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A--~~~g~~~iv~~Ll~~GAdv 321 (321)
+.++|++|+++|++++.+|..|+||||+| +..|+.++|++|+++||+|
T Consensus 105 ~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~v 164 (661)
T PHA02917 105 IFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSV 164 (661)
T ss_pred hHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCc
Confidence 56788999999999999999999999965 3578999999999999985
No 44
>PHA02730 ankyrin-like protein; Provisional
Probab=99.62 E-value=2.7e-15 Score=149.55 Aligned_cols=123 Identities=17% Similarity=0.161 Sum_probs=101.6
Q ss_pred HHHHHhccc--cCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCC----HHHHHHHHHcCC--CCCCCCCCCCcHHHH
Q 020810 197 KLGEAMGLA--VGGDATTSADNAGADEAEEVGNEDESIVHHTASVGD----AEGLKNALAAGA--DKDEEDSEGRTALHF 268 (321)
Q Consensus 197 ~l~~~~~~~--~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~----~~~v~~Ll~~g~--~~~~~d~~g~TpLh~ 268 (321)
.|+..+... +..+.+..++..|++... . ..|+||||+|+..++ .+++++||++|+ +++.+|..|.||||.
T Consensus 346 ~l~~Y~~~~~~v~ieIvelLIs~GAdIN~-k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~ 423 (672)
T PHA02730 346 MLINYLHYGDMVSIPILRCMLDNGATMDK-T-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYG 423 (672)
T ss_pred HHHHHHhcCCcCcHHHHHHHHHCCCCCCc-C-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhH
Confidence 344555433 556788888899988764 3 689999999998875 899999999987 688899999999984
Q ss_pred ---HHHCC---------CHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 269 ---ACGYG---------EVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 269 ---A~~~g---------~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
+...+ ..+++++|+++|++++.+|..|+||||+|+..++.+++++|+++||+|
T Consensus 424 ~i~a~~~n~~~~~~e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdI 488 (672)
T PHA02730 424 LILSRFNNCGYHCYETILIDVFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASV 488 (672)
T ss_pred HHHHHhccccccccchhHHHHHHHHHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCC
Confidence 33332 235799999999999999999999999999999999999999999986
No 45
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.62 E-value=1.6e-15 Score=149.32 Aligned_cols=101 Identities=30% Similarity=0.444 Sum_probs=93.5
Q ss_pred hhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHH-cC-CCCCCccCCCCcH
Q 020810 221 EAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLE-AG-ANVDALDKNKNTA 298 (321)
Q Consensus 221 ~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~-~g-a~~~~~d~~g~Tp 298 (321)
..+..|.+|.||||+||+.|+++.+..|+..|++++.++.++.||||+|+.+|++.+|+-|++ .| ..++..|..|.||
T Consensus 265 lv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tp 344 (929)
T KOG0510|consen 265 LVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTP 344 (929)
T ss_pred HhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCc
Confidence 345678999999999999999999999999999999999999999999999999999999998 44 3467889999999
Q ss_pred HHHHHHCCcHHHHHHHHHCCCCC
Q 020810 299 LHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 299 Lh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
||.|+..||..|+++||..||.+
T Consensus 345 LHlaa~~gH~~v~qlLl~~GA~~ 367 (929)
T KOG0510|consen 345 LHLAAKSGHDRVVQLLLNKGALF 367 (929)
T ss_pred hhhhhhcCHHHHHHHHHhcChhh
Confidence 99999999999999999999963
No 46
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.62 E-value=1.6e-15 Score=156.79 Aligned_cols=99 Identities=31% Similarity=0.348 Sum_probs=95.2
Q ss_pred hhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHH
Q 020810 222 AEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHY 301 (321)
Q Consensus 222 ~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~ 301 (321)
.+.++..+.||||.||.+|++++|++||++|++++.++..|+||||.||..|+.+|+.+|+++|+++|..|.+|.||||+
T Consensus 533 v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~TpL~i 612 (1143)
T KOG4177|consen 533 VDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTPLHI 612 (1143)
T ss_pred eehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcchhHH
Confidence 46677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHCCcHHHHHHHHHCCCC
Q 020810 302 AAGYGRKECVALLLENGAA 320 (321)
Q Consensus 302 A~~~g~~~iv~~Ll~~GAd 320 (321)
|+..|+.+++++|+..|++
T Consensus 613 A~~lg~~~~~k~l~~~~~~ 631 (1143)
T KOG4177|consen 613 AVRLGYLSVVKLLKVVTAT 631 (1143)
T ss_pred HHHhcccchhhHHHhccCc
Confidence 9999999999999998875
No 47
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.62 E-value=2.5e-15 Score=153.68 Aligned_cols=91 Identities=20% Similarity=0.298 Sum_probs=84.9
Q ss_pred chHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHH
Q 020810 230 ESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKE 309 (321)
Q Consensus 230 ~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~ 309 (321)
.++|+.++..|+.+++++|++.|++++.+|..|+||||+|+..|+.++|++|+++|++++..+..|.||||+|+..|+.+
T Consensus 146 ~~~l~~~i~~~~~~i~k~Ll~~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~~~~~ 225 (682)
T PHA02876 146 MKLIKERIQQDELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNID 225 (682)
T ss_pred hHHHHHHHHCCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHHcCCHH
Confidence 45666777889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCC
Q 020810 310 CVALLLENGAA 320 (321)
Q Consensus 310 iv~~Ll~~GAd 320 (321)
++++|++.+++
T Consensus 226 ivk~Ll~~~~~ 236 (682)
T PHA02876 226 TIKAIIDNRSN 236 (682)
T ss_pred HHHHHHhcCCC
Confidence 99999887765
No 48
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.61 E-value=3e-15 Score=147.59 Aligned_cols=67 Identities=19% Similarity=0.312 Sum_probs=60.3
Q ss_pred CCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCC
Q 020810 253 ADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGA 319 (321)
Q Consensus 253 ~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GA 319 (321)
++++.+|..|+||||+|+..++.++|++|++.|++++.+|..|+||||+|+..|+.++|+.|++++.
T Consensus 247 advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL~~~p 313 (494)
T PHA02989 247 IKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQLKP 313 (494)
T ss_pred CCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCC
Confidence 4455566779999999999999999999999999999999999999999999999999999998765
No 49
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.61 E-value=1e-15 Score=127.49 Aligned_cols=97 Identities=24% Similarity=0.265 Sum_probs=80.1
Q ss_pred hhcCCCCchHHHHHHHcCCHHHHHHHHHcCC--C-----CCCCCCCCCcHHHHHHHCCCH---HHHHHHHHcCCCCCCcc
Q 020810 223 EEVGNEDESIVHHTASVGDAEGLKNALAAGA--D-----KDEEDSEGRTALHFACGYGEV---KCAQILLEAGANVDALD 292 (321)
Q Consensus 223 ~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~--~-----~~~~d~~g~TpLh~A~~~g~~---~~v~~Ll~~ga~~~~~d 292 (321)
...|..|.||||+||..|+. +.+++..+. + ++.+|..|+||||+|+..++. +++++|++.|++++.++
T Consensus 11 ~~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~ 88 (154)
T PHA02736 11 SEPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKE 88 (154)
T ss_pred HhcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccC
Confidence 55688899999999999984 333332222 2 335688999999999999987 46899999999999998
Q ss_pred -CCCCcHHHHHHHCCcHHHHHHHHH-CCCCC
Q 020810 293 -KNKNTALHYAAGYGRKECVALLLE-NGAAV 321 (321)
Q Consensus 293 -~~g~TpLh~A~~~g~~~iv~~Ll~-~GAdv 321 (321)
..|+||||+|+..|+.+++++|+. .|+++
T Consensus 89 ~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~ 119 (154)
T PHA02736 89 RVFGNTPLHIAVYTQNYELATWLCNQPGVNM 119 (154)
T ss_pred CCCCCcHHHHHHHhCCHHHHHHHHhCCCCCC
Confidence 499999999999999999999998 48874
No 50
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.61 E-value=3.7e-15 Score=146.91 Aligned_cols=110 Identities=18% Similarity=0.149 Sum_probs=95.0
Q ss_pred cchhhhcCCchhhhcCCCCchHHHHHHHc---CCHHHHHHHHHcCCCC-CCCCCCCCcHHHHHHHC--CCHHHHHHHHHc
Q 020810 211 TTSADNAGADEAEEVGNEDESIVHHTASV---GDAEGLKNALAAGADK-DEEDSEGRTALHFACGY--GEVKCAQILLEA 284 (321)
Q Consensus 211 ~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~---g~~~~v~~Ll~~g~~~-~~~d~~g~TpLh~A~~~--g~~~~v~~Ll~~ 284 (321)
+..++..|++ ++.++..|.||||+|+.. ++.+++++|+++|+++ +..|..|+||||+|+.. ++.++|++|+++
T Consensus 91 v~~Ll~~Gad-in~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~ 169 (494)
T PHA02989 91 VKLLLKFGAD-INLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSF 169 (494)
T ss_pred HHHHHHCCCC-CCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHc
Confidence 3445566666 467788999999988765 6899999999999999 88999999999998754 689999999999
Q ss_pred CCCCCC-ccCCCCcHHHHHHHCC----cHHHHHHHHHCCCCC
Q 020810 285 GANVDA-LDKNKNTALHYAAGYG----RKECVALLLENGAAV 321 (321)
Q Consensus 285 ga~~~~-~d~~g~TpLh~A~~~g----~~~iv~~Ll~~GAdv 321 (321)
|++++. .+..|.||||+|+..+ +.++|++|+++||++
T Consensus 170 Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~v 211 (494)
T PHA02989 170 GVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNI 211 (494)
T ss_pred CCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCc
Confidence 999998 6889999999998754 899999999999985
No 51
>PHA02798 ankyrin-like protein; Provisional
Probab=99.60 E-value=4.4e-15 Score=146.17 Aligned_cols=111 Identities=24% Similarity=0.321 Sum_probs=98.0
Q ss_pred ccchhhhcCCchhhhcCCCCchHHHHHHHcC---CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCC---HHHHHHHHH
Q 020810 210 ATTSADNAGADEAEEVGNEDESIVHHTASVG---DAEGLKNALAAGADKDEEDSEGRTALHFACGYGE---VKCAQILLE 283 (321)
Q Consensus 210 ~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g---~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~---~~~v~~Ll~ 283 (321)
.+..++..|++ ++..|..|+||||+|+..+ +.+++++|+++|++++.+|..|.||||+|+..++ .+++++|++
T Consensus 91 iv~~Ll~~Gad-iN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~ 169 (489)
T PHA02798 91 IVKILIENGAD-INKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLE 169 (489)
T ss_pred HHHHHHHCCCC-CCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHH
Confidence 34455566766 5778889999999999875 7899999999999999999999999999999998 999999999
Q ss_pred cCCCCCCcc-CCCCcHHHHHHHC----CcHHHHHHHHHCCCCC
Q 020810 284 AGANVDALD-KNKNTALHYAAGY----GRKECVALLLENGAAV 321 (321)
Q Consensus 284 ~ga~~~~~d-~~g~TpLh~A~~~----g~~~iv~~Ll~~GAdv 321 (321)
+|++++..+ ..|.||||.++.. ++.+++++|+++|+++
T Consensus 170 ~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i 212 (489)
T PHA02798 170 KGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFII 212 (489)
T ss_pred hCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCc
Confidence 999999885 5799999998764 4899999999999975
No 52
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.60 E-value=1.3e-15 Score=142.05 Aligned_cols=97 Identities=27% Similarity=0.345 Sum_probs=93.0
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHH
Q 020810 225 VGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAG 304 (321)
Q Consensus 225 ~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~ 304 (321)
....|-+||-.|+..||+++|+.|+.+|+++|.......|||--||.-|++++|+||+++|+|++..|+.|.|+||+|+.
T Consensus 80 e~IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~y 159 (615)
T KOG0508|consen 80 ETIEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACY 159 (615)
T ss_pred cccCCCchhhHHhccCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeec
Confidence 35678899999999999999999999999999998889999999999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHCCCCC
Q 020810 305 YGRKECVALLLENGAAV 321 (321)
Q Consensus 305 ~g~~~iv~~Ll~~GAdv 321 (321)
.||.+|+++|++.||||
T Consensus 160 kGh~~I~qyLle~gADv 176 (615)
T KOG0508|consen 160 KGHVDIAQYLLEQGADV 176 (615)
T ss_pred cCchHHHHHHHHhCCCc
Confidence 99999999999999996
No 53
>PHA02795 ankyrin-like protein; Provisional
Probab=99.59 E-value=7.1e-15 Score=140.22 Aligned_cols=112 Identities=19% Similarity=0.090 Sum_probs=97.1
Q ss_pred CCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCC------CCCCCcHHHHHHHCCCHHHHHH
Q 020810 207 GGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEE------DSEGRTALHFACGYGEVKCAQI 280 (321)
Q Consensus 207 ~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~------d~~g~TpLh~A~~~g~~~~v~~ 280 (321)
..+.+..++..|++... .++.||||+|+..++.+++++|+.+|++.... +..+.|++|.|+..++.+++++
T Consensus 130 ~~eiV~~LI~~GADIn~---~~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~ 206 (437)
T PHA02795 130 EIDIVDFMVDHGAVIYK---IECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKL 206 (437)
T ss_pred CHHHHHHHHHCCCCCCC---CCCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHH
Confidence 34566777788888643 24589999999999999999999999854322 1347899999999999999999
Q ss_pred HHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 281 LLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 281 Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
|+++|++++.+|..|+||||+|+..|+.++|++|+++||+|
T Consensus 207 LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdI 247 (437)
T PHA02795 207 CIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANV 247 (437)
T ss_pred HHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 99999999999999999999999999999999999999986
No 54
>PHA02730 ankyrin-like protein; Provisional
Probab=99.58 E-value=1.1e-14 Score=145.26 Aligned_cols=101 Identities=13% Similarity=0.119 Sum_probs=89.6
Q ss_pred chhhhcCCCCchHHHHHHHcC---CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCC--CHHHHHHHHHcCCC--CCCcc
Q 020810 220 DEAEEVGNEDESIVHHTASVG---DAEGLKNALAAGADKDEEDSEGRTALHFACGYG--EVKCAQILLEAGAN--VDALD 292 (321)
Q Consensus 220 ~~~~~~d~~g~t~Lh~Aa~~g---~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g--~~~~v~~Ll~~ga~--~~~~d 292 (321)
+....+|..|+||||+|+..| +.++|++||++|++++.+|..|+||||+|+..+ +.++|++|++.|++ ++..+
T Consensus 32 ~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~ 111 (672)
T PHA02730 32 NLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTS 111 (672)
T ss_pred chhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCccccc
Confidence 444577889999999999997 599999999999999999999999999999977 79999999999654 57788
Q ss_pred CCCCcHHHHHHH--CCcHHHHHHHHH-CCCC
Q 020810 293 KNKNTALHYAAG--YGRKECVALLLE-NGAA 320 (321)
Q Consensus 293 ~~g~TpLh~A~~--~g~~~iv~~Ll~-~GAd 320 (321)
..+.+|||.++. .++.++|++|+. .|+|
T Consensus 112 ~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~ 142 (672)
T PHA02730 112 NINDFDLYSYMSSDNIDLRLLKYLIVDKRIR 142 (672)
T ss_pred ccCCchHHHHHHhcCCcHHHHHHHHHhcCCC
Confidence 889999999988 999999999996 5555
No 55
>PHA02917 ankyrin-like protein; Provisional
Probab=99.56 E-value=1.8e-14 Score=145.91 Aligned_cols=108 Identities=22% Similarity=0.250 Sum_probs=93.8
Q ss_pred hhhh-cCCchhhhcCCCCchHHHHHHHcC-----------------------CHHHHHHHHHcCCCCCCCCCCCCcHHHH
Q 020810 213 SADN-AGADEAEEVGNEDESIVHHTASVG-----------------------DAEGLKNALAAGADKDEEDSEGRTALHF 268 (321)
Q Consensus 213 ~~~~-~~~~~~~~~d~~g~t~Lh~Aa~~g-----------------------~~~~v~~Ll~~g~~~~~~d~~g~TpLh~ 268 (321)
.++. .|++..+. +.+|+||||+||+.+ ..++++.|+.+|++++.+|..|+||||+
T Consensus 380 ~LL~~~ga~~~~~-~~~G~TpL~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~GAdIN~kd~~G~TpLh~ 458 (661)
T PHA02917 380 YLLKKEGGDAVNH-LDDGEIPIGHLCKSNYGCYNFYTYTYKKGLCDMSYACPILSTINICLPYLKDINMIDKRGETLLHK 458 (661)
T ss_pred HHHHhcCCCcccc-CCCCCChhHHHHHhcccchhhhhhhhhhccchhhhhhhhHHHHHHHHHCCCCCCCCCCCCcCHHHH
Confidence 3443 45554444 556999999987432 3567899999999999999999999999
Q ss_pred HHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHH-CCcHHHHHHHHHCCCCC
Q 020810 269 ACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAG-YGRKECVALLLENGAAV 321 (321)
Q Consensus 269 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~-~g~~~iv~~Ll~~GAdv 321 (321)
|+..++.+++++|+++|++++.+|..|+||||+|+. .++.+++++|+.+|+++
T Consensus 459 Aa~~~~~~~v~~Ll~~GAdin~~d~~G~T~L~~A~~~~~~~~iv~~LL~~ga~i 512 (661)
T PHA02917 459 AVRYNKQSLVSLLLESGSDVNIRSNNGYTCIAIAINESRNIELLKMLLCHKPTL 512 (661)
T ss_pred HHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCh
Confidence 999999999999999999999999999999999996 78999999999999874
No 56
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.56 E-value=1.1e-14 Score=150.90 Aligned_cols=96 Identities=38% Similarity=0.481 Sum_probs=92.7
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHC
Q 020810 226 GNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGY 305 (321)
Q Consensus 226 d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~ 305 (321)
...+-++||.+...+...+++.++++|++++.++..|.||||+||.+|+..+|++|+++|++++.++..|+||||.|+..
T Consensus 504 ~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~ 583 (1143)
T KOG4177|consen 504 AKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQ 583 (1143)
T ss_pred chhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHc
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHCCCCC
Q 020810 306 GRKECVALLLENGAAV 321 (321)
Q Consensus 306 g~~~iv~~Ll~~GAdv 321 (321)
|+.+|+++|+++||+|
T Consensus 584 G~~~i~~LLlk~GA~v 599 (1143)
T KOG4177|consen 584 GHNDIAELLLKHGASV 599 (1143)
T ss_pred ChHHHHHHHHHcCCCC
Confidence 9999999999999986
No 57
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.56 E-value=5.7e-14 Score=110.63 Aligned_cols=95 Identities=42% Similarity=0.618 Sum_probs=76.9
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHC
Q 020810 226 GNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGY 305 (321)
Q Consensus 226 d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~ 305 (321)
+..|.|+||+|+..++.+++++|+..+.+.+..+..|.||||+|+..+..+++++|+..|++++..+..|.||+|+|+..
T Consensus 4 ~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~ 83 (126)
T cd00204 4 DEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARN 83 (126)
T ss_pred CcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence 45678888888888888888888888877777788888888888888888888888888877777777888888888888
Q ss_pred CcHHHHHHHHHCCCC
Q 020810 306 GRKECVALLLENGAA 320 (321)
Q Consensus 306 g~~~iv~~Ll~~GAd 320 (321)
++.+++++|+.+|.+
T Consensus 84 ~~~~~~~~L~~~~~~ 98 (126)
T cd00204 84 GNLDVVKLLLKHGAD 98 (126)
T ss_pred CcHHHHHHHHHcCCC
Confidence 888888888877643
No 58
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.55 E-value=4.4e-14 Score=147.12 Aligned_cols=94 Identities=34% Similarity=0.385 Sum_probs=85.6
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHC
Q 020810 226 GNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGY 305 (321)
Q Consensus 226 d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~ 305 (321)
+..+.++||.||..|+.++++.|++.|++++..|..|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+..
T Consensus 522 ~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~ 601 (823)
T PLN03192 522 DPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISA 601 (823)
T ss_pred CccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHh
Confidence 44567999999999999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred CcHHHHHHHHHCCC
Q 020810 306 GRKECVALLLENGA 319 (321)
Q Consensus 306 g~~~iv~~Ll~~GA 319 (321)
|+.+++++|++.++
T Consensus 602 g~~~iv~~L~~~~~ 615 (823)
T PLN03192 602 KHHKIFRILYHFAS 615 (823)
T ss_pred CCHHHHHHHHhcCc
Confidence 77777777665543
No 59
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.53 E-value=1e-13 Score=104.45 Aligned_cols=64 Identities=36% Similarity=0.569 Sum_probs=59.7
Q ss_pred CchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCcc
Q 020810 229 DESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALD 292 (321)
Q Consensus 229 g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d 292 (321)
|+||||+||..|+.+++++|++.|++++.+|.+|+||||+|+.+|+.+++++|+++|++++.+|
T Consensus 26 ~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 26 GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVKLLLEHGADVNIRN 89 (89)
T ss_dssp SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHHHHHHTTT-TTSS-
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 7899999999999999999999999999999999999999999999999999999999998875
No 60
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.51 E-value=1.4e-14 Score=99.78 Aligned_cols=55 Identities=44% Similarity=0.719 Sum_probs=32.2
Q ss_pred HHHcC-CCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHH
Q 020810 248 ALAAG-ADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYA 302 (321)
Q Consensus 248 Ll~~g-~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A 302 (321)
||++| ++++..|..|.||||+|+.+|+.++|++|+..|++++.+|..|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 57777 88999999999999999999999999999999999999999999999987
No 61
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.51 E-value=8.6e-14 Score=141.44 Aligned_cols=87 Identities=40% Similarity=0.584 Sum_probs=84.8
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHH
Q 020810 231 SIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKEC 310 (321)
Q Consensus 231 t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~i 310 (321)
+.||.|+..|+.++++.|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~i 163 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREV 163 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHH
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHC
Q 020810 311 VALLLEN 317 (321)
Q Consensus 311 v~~Ll~~ 317 (321)
+++|+++
T Consensus 164 v~~Ll~~ 170 (664)
T PTZ00322 164 VQLLSRH 170 (664)
T ss_pred HHHHHhC
Confidence 9999998
No 62
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.51 E-value=4.3e-14 Score=96.62 Aligned_cols=54 Identities=44% Similarity=0.736 Sum_probs=35.2
Q ss_pred CCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHH
Q 020810 262 GRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLL 315 (321)
Q Consensus 262 g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll 315 (321)
|+||||+|+..|+.+++++|++.|++++.+|.+|+||||+|+..|+.+++++||
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 567777777777777777777777777777777777777777777777777765
No 63
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.50 E-value=4.5e-14 Score=128.14 Aligned_cols=97 Identities=27% Similarity=0.380 Sum_probs=89.8
Q ss_pred chhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHc-CCCCCCccCCCCcH
Q 020810 220 DEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEA-GANVDALDKNKNTA 298 (321)
Q Consensus 220 ~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~Tp 298 (321)
+++.+....|.|+|++|+..|+.++|+.||.+|+|+|.+|.+|.|+|+.||.+||.+||++||.. ++|+...|.+|.|+
T Consensus 331 nVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTA 410 (452)
T KOG0514|consen 331 DVNAKASQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTA 410 (452)
T ss_pred CcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchh
Confidence 44455567899999999999999999999999999999999999999999999999999999977 89999999999999
Q ss_pred HHHHHHCCcHHHHHHHHH
Q 020810 299 LHYAAGYGRKECVALLLE 316 (321)
Q Consensus 299 Lh~A~~~g~~~iv~~Ll~ 316 (321)
|.+|...||.+|.-+|..
T Consensus 411 l~IAleagh~eIa~mlYa 428 (452)
T KOG0514|consen 411 LSIALEAGHREIAVMLYA 428 (452)
T ss_pred hhhHHhcCchHHHHHHHH
Confidence 999999999999887754
No 64
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.50 E-value=5.4e-14 Score=132.59 Aligned_cols=89 Identities=34% Similarity=0.405 Sum_probs=82.4
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHH
Q 020810 233 VHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVA 312 (321)
Q Consensus 233 Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~ 312 (321)
|.-|+..|.+++|+.++..--|+...+..|.|+||-|+..||.+||++||+.|++||..|.+||||||+|+.+++.-+++
T Consensus 554 LLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ck 633 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCK 633 (752)
T ss_pred HHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHH
Confidence 45588889999999999888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCCC
Q 020810 313 LLLENGAAV 321 (321)
Q Consensus 313 ~Ll~~GAdv 321 (321)
.|++.||.|
T Consensus 634 qLVe~Gaav 642 (752)
T KOG0515|consen 634 QLVESGAAV 642 (752)
T ss_pred HHHhccceE
Confidence 999999864
No 65
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.50 E-value=5.6e-14 Score=133.15 Aligned_cols=111 Identities=32% Similarity=0.410 Sum_probs=96.8
Q ss_pred ccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-----------------------------
Q 020810 210 ATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDS----------------------------- 260 (321)
Q Consensus 210 ~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~----------------------------- 260 (321)
.+..++..++. ++..|..+|||||.|+..|++.++++||.+|+++...+.
T Consensus 88 ~v~~l~e~ga~-Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~i 166 (527)
T KOG0505|consen 88 MVKFLVENGAN-VNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDI 166 (527)
T ss_pred HHHHHHHhcCC-ccccccccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccH
Confidence 44445555555 477889999999999999999999999999877533321
Q ss_pred ------------------------------CCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHH
Q 020810 261 ------------------------------EGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKEC 310 (321)
Q Consensus 261 ------------------------------~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~i 310 (321)
.|.|+||.|+..|..++.++|+.+|.+++.+|.+||||||.|+..|+.++
T Consensus 167 ea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~ 246 (527)
T KOG0505|consen 167 EAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDA 246 (527)
T ss_pred HHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhH
Confidence 37899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCCC
Q 020810 311 VALLLENGAAV 321 (321)
Q Consensus 311 v~~Ll~~GAdv 321 (321)
+++|+++||++
T Consensus 247 ~elL~~~ga~~ 257 (527)
T KOG0505|consen 247 CELLVEHGADM 257 (527)
T ss_pred HHHHHHhhccc
Confidence 99999999974
No 66
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.48 E-value=1.2e-13 Score=117.72 Aligned_cols=119 Identities=27% Similarity=0.312 Sum_probs=99.9
Q ss_pred ChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 020810 181 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDS 260 (321)
Q Consensus 181 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~ 260 (321)
+|...+...++..++++|+ +.|++. +.......++|.+|+..|..++|++||.++.++|..|-
T Consensus 162 TpLiWAaa~G~i~vV~fLL----------------~~GAdp-~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDw 224 (296)
T KOG0502|consen 162 TPLIWAAAKGHIPVVQFLL----------------NSGADP-DALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDW 224 (296)
T ss_pred hHhHHHHhcCchHHHHHHH----------------HcCCCh-hhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceecc
Confidence 3444445455555555553 445443 55567788999999999999999999999999999999
Q ss_pred CCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHC
Q 020810 261 EGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLEN 317 (321)
Q Consensus 261 ~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~ 317 (321)
+|.|||-||++.+|.+||+.|+..|++++..+..|++++..|+..|+. +|+..++.
T Consensus 225 NGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~mdlAValGyr-~Vqqvie~ 280 (296)
T KOG0502|consen 225 NGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIMDLAVALGYR-IVQQVIEK 280 (296)
T ss_pred CCCceeeeeecCChHHHHHHHHhcCCCcccccccCCcHHHHHHHhhhH-HHHHHHHH
Confidence 999999999999999999999999999999999999999999999988 66666653
No 67
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.48 E-value=6.4e-14 Score=137.18 Aligned_cols=105 Identities=27% Similarity=0.282 Sum_probs=91.9
Q ss_pred cCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCC
Q 020810 217 AGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKN 296 (321)
Q Consensus 217 ~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~ 296 (321)
...+..+..|.+|.|+||+||.+|+..++++|+++-+-++.+|..|.+|||+|++.|+.+++++|+.++..+|..+..|.
T Consensus 37 trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~ 116 (854)
T KOG0507|consen 37 TRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENE 116 (854)
T ss_pred CCCccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCc
Confidence 34455677788899999999999999999999998888888888899999999999999999999999888888889999
Q ss_pred cHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 297 TALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 297 TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
||||.|+.+||.++|.+|+.+|+|.
T Consensus 117 tplhlaaqhgh~dvv~~Ll~~~adp 141 (854)
T KOG0507|consen 117 TPLHLAAQHGHLEVVFYLLKKNADP 141 (854)
T ss_pred CccchhhhhcchHHHHHHHhcCCCc
Confidence 9999999999999999999998873
No 68
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.46 E-value=1.5e-13 Score=93.86 Aligned_cols=54 Identities=35% Similarity=0.570 Sum_probs=46.7
Q ss_pred CchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHH
Q 020810 229 DESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILL 282 (321)
Q Consensus 229 g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll 282 (321)
|+|+||+||..|+.+++++|++.|++++.+|.+|+||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 689999999999999999999999999999999999999999999999999986
No 69
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.46 E-value=1.5e-13 Score=101.79 Aligned_cols=75 Identities=23% Similarity=0.311 Sum_probs=71.1
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHH
Q 020810 228 EDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYA 302 (321)
Q Consensus 228 ~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A 302 (321)
.|++|||+|+-+|.++++++|+..|++++.+|++|-|||..|++.||..||++|++.|++...+..+|.+.+..+
T Consensus 33 ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cVklLL~~GAdrt~~~PdG~~~~eat 107 (117)
T KOG4214|consen 33 GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCVKLLLQNGADRTIHAPDGTALIEAT 107 (117)
T ss_pred CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHHHHHHHcCcccceeCCCchhHHhhc
Confidence 689999999999999999999999999999999999999999999999999999999999999888888776654
No 70
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.46 E-value=3.8e-13 Score=116.67 Aligned_cols=104 Identities=37% Similarity=0.459 Sum_probs=95.2
Q ss_pred hhhcCCchhhhcCCCCchHHHHHHHcCC-----HHHHHHHHHcCC---CCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcC
Q 020810 214 ADNAGADEAEEVGNEDESIVHHTASVGD-----AEGLKNALAAGA---DKDEEDSEGRTALHFACGYGEVKCAQILLEAG 285 (321)
Q Consensus 214 ~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~-----~~~v~~Ll~~g~---~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g 285 (321)
+...+.+. +..+..|.|+||+|+..++ .++++.||+.|+ ..+..|..|+||||+|+..|+.+++++|++.|
T Consensus 92 l~~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~ 170 (235)
T COG0666 92 LLASGADV-NAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAG 170 (235)
T ss_pred HHHcCCCc-ccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhHHHHHcCchHHHHHHHhcC
Confidence 34555665 8889999999999999999 999999999999 56667999999999999999999999999999
Q ss_pred CCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCC
Q 020810 286 ANVDALDKNKNTALHYAAGYGRKECVALLLENG 318 (321)
Q Consensus 286 a~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~G 318 (321)
++++..+..|.|+|++|+..++.+++.+|++.+
T Consensus 171 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 171 ADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred CCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence 999999999999999999999999999999864
No 71
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.44 E-value=1.2e-12 Score=113.56 Aligned_cols=99 Identities=40% Similarity=0.534 Sum_probs=92.4
Q ss_pred hhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCC-----HHHHHHHHHcCC---CCCCccCC
Q 020810 223 EEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGE-----VKCAQILLEAGA---NVDALDKN 294 (321)
Q Consensus 223 ~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~-----~~~v~~Ll~~ga---~~~~~d~~ 294 (321)
...+..+.+++|+++..+...++++++..|++++.++..|.||||+|+..++ .+++++|++.|+ ..+.+|..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~ 146 (235)
T COG0666 67 AARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDED 146 (235)
T ss_pred ccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCC
Confidence 4446668999999999999999999999999999999999999999999999 999999999999 56667999
Q ss_pred CCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 295 KNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 295 g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
|+||||+|+..|+.+++++|++.|+++
T Consensus 147 g~tpl~~A~~~~~~~~~~~ll~~~~~~ 173 (235)
T COG0666 147 GNTPLHWAALNGDADIVELLLEAGADP 173 (235)
T ss_pred CCchhHHHHHcCchHHHHHHHhcCCCC
Confidence 999999999999999999999999874
No 72
>PHA02792 ankyrin-like protein; Provisional
Probab=99.43 E-value=6.8e-13 Score=131.25 Aligned_cols=113 Identities=17% Similarity=0.114 Sum_probs=94.7
Q ss_pred cCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC--CcHHHHHHHCCCH---HHHHH
Q 020810 206 VGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEG--RTALHFACGYGEV---KCAQI 280 (321)
Q Consensus 206 ~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g--~TpLh~A~~~g~~---~~v~~ 280 (321)
+.-+++..++..|.+.. .......+|.||..|+.++|++|+++|++++.+|..| .||||+|+..... +++++
T Consensus 319 v~ieiIK~LId~Ga~~~---r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~Ilkl 395 (631)
T PHA02792 319 VYINVIKCMIDEGATLY---RFKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKL 395 (631)
T ss_pred ccHHHHHHHHHCCCccc---cCCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHH
Confidence 44567777888887753 2235667889999999999999999999999988775 6899998776654 45788
Q ss_pred HHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 281 LLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 281 Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
|+++|++++.+|..|+||||+|+..++.+++++|+++||++
T Consensus 396 LIs~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADI 436 (631)
T PHA02792 396 CKPYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADI 436 (631)
T ss_pred HHhcCCccccccccCcchHHHHHHcCCHHHHHHHHHCCCCC
Confidence 89999999999999999999999999999999999999985
No 73
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.43 E-value=4.3e-12 Score=99.80 Aligned_cols=93 Identities=39% Similarity=0.550 Sum_probs=88.4
Q ss_pred hhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHH
Q 020810 223 EEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYA 302 (321)
Q Consensus 223 ~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A 302 (321)
...+..|.++||+|+..++.+++++|+..++.++..+..|.||+|+|+..++.+++++|+..+.+++..+..+.|||++|
T Consensus 34 ~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~ 113 (126)
T cd00204 34 NAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLA 113 (126)
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 56678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHCCcHHHHHHHH
Q 020810 303 AGYGRKECVALLL 315 (321)
Q Consensus 303 ~~~g~~~iv~~Ll 315 (321)
...++.+++++|+
T Consensus 114 ~~~~~~~~~~~Ll 126 (126)
T cd00204 114 AKNGHLEVVKLLL 126 (126)
T ss_pred HhcCCHHHHHHhC
Confidence 9999999999985
No 74
>PHA02792 ankyrin-like protein; Provisional
Probab=99.40 E-value=9.9e-13 Score=130.14 Aligned_cols=112 Identities=16% Similarity=0.154 Sum_probs=93.2
Q ss_pred cccchhhhcCCchhhhcCCC--CchHHHHHHHcCCH---HHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHH
Q 020810 209 DATTSADNAGADEAEEVGNE--DESIVHHTASVGDA---EGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLE 283 (321)
Q Consensus 209 d~~~~~~~~~~~~~~~~d~~--g~t~Lh~Aa~~g~~---~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~ 283 (321)
+.+..++..|++. +.+|.. +.||||+|+..... +++++|+.+|++++.+|..|+||||+|+..++.+++++|++
T Consensus 353 eIVelLIs~GADI-N~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs 431 (631)
T PHA02792 353 KVVEYILKNGNVV-VEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKHGRSILYYCIESHSVSLVEWLID 431 (631)
T ss_pred HHHHHHHHcCCch-hhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCccccccccCcchHHHHHHcCCHHHHHHHHH
Confidence 4556666777775 445555 46999998776654 46888999999999999999999999999999999999999
Q ss_pred cCCCCCCccCCCCcHHHHHHH--CC--------cHHHHHHHHHCCCCC
Q 020810 284 AGANVDALDKNKNTALHYAAG--YG--------RKECVALLLENGAAV 321 (321)
Q Consensus 284 ~ga~~~~~d~~g~TpLh~A~~--~g--------~~~iv~~Ll~~GAdv 321 (321)
+|++++.+|..|.||||+|+. .+ ..+++++|+++|.++
T Consensus 432 ~GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~i 479 (631)
T PHA02792 432 NGADINITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLPTI 479 (631)
T ss_pred CCCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCCh
Confidence 999999999999999999975 22 256799999998763
No 75
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.40 E-value=6.7e-13 Score=137.08 Aligned_cols=95 Identities=21% Similarity=0.128 Sum_probs=83.5
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC--------------CCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCc
Q 020810 226 GNEDESIVHHTASVGDAEGLKNALAAGADKDEED--------------SEGRTALHFACGYGEVKCAQILLEAGANVDAL 291 (321)
Q Consensus 226 d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d--------------~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~ 291 (321)
...|.||||+||..|+.++|++|+++|++++.++ ..|+||||+|+..++.+++++|++.|++++.+
T Consensus 125 ~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~ 204 (743)
T TIGR00870 125 FTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTA 204 (743)
T ss_pred cCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhH
Confidence 3579999999999999999999999999998653 35899999999999999999999999999999
Q ss_pred cCCCCcHHHHHHHCC---------cHHHHHHHHHCCCC
Q 020810 292 DKNKNTALHYAAGYG---------RKECVALLLENGAA 320 (321)
Q Consensus 292 d~~g~TpLh~A~~~g---------~~~iv~~Ll~~GAd 320 (321)
|..|+||||+|+..+ ...|.++++..++.
T Consensus 205 d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~ 242 (743)
T TIGR00870 205 DSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDK 242 (743)
T ss_pred hhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999987 34466777765543
No 76
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.39 E-value=3.3e-12 Score=112.88 Aligned_cols=95 Identities=28% Similarity=0.368 Sum_probs=89.2
Q ss_pred hhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHH
Q 020810 222 AEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDE-EDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALH 300 (321)
Q Consensus 222 ~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~-~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh 300 (321)
.+.+|..|.++|.+|+..|+++.|+.||+.|+|+|. ++..+.||||+|+..|+.+++++|++.|+.....|.-|+|+-.
T Consensus 38 vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~~~vNsvgrTAaq 117 (396)
T KOG1710|consen 38 VNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARMYLVNSVGRTAAQ 117 (396)
T ss_pred hhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHHHHHhccCccccccchhhhHHH
Confidence 477899999999999999999999999999999987 5778999999999999999999999999999999999999999
Q ss_pred HHHHCCcHHHHHHHHH
Q 020810 301 YAAGYGRKECVALLLE 316 (321)
Q Consensus 301 ~A~~~g~~~iv~~Ll~ 316 (321)
.|+.-|+.+||..+-.
T Consensus 118 mAAFVG~H~CV~iINN 133 (396)
T KOG1710|consen 118 MAAFVGHHECVAIINN 133 (396)
T ss_pred HHHHhcchHHHHHHhc
Confidence 9999999999987643
No 77
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.34 E-value=6.8e-12 Score=129.63 Aligned_cols=97 Identities=31% Similarity=0.308 Sum_probs=75.1
Q ss_pred cCCCCchHHHHHHHcC---CHHHHHHHHHcCCC------CC----CCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCc
Q 020810 225 VGNEDESIVHHTASVG---DAEGLKNALAAGAD------KD----EEDSEGRTALHFACGYGEVKCAQILLEAGANVDAL 291 (321)
Q Consensus 225 ~d~~g~t~Lh~Aa~~g---~~~~v~~Ll~~g~~------~~----~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~ 291 (321)
.+..|.|+||.|+..+ ...++.+++..+.+ ++ .....|.||||+|+.+|+.++|++|+++|++++.+
T Consensus 78 ~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~ 157 (743)
T TIGR00870 78 RGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPAR 157 (743)
T ss_pred CCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcC
Confidence 4678999999998722 22333444443322 11 12356999999999999999999999999999865
Q ss_pred c--------------CCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 292 D--------------KNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 292 d--------------~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
+ ..|.||||+|+..|+.+++++|+++|||+
T Consensus 158 ~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadi 201 (743)
T TIGR00870 158 ACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADI 201 (743)
T ss_pred cCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcch
Confidence 3 35899999999999999999999999875
No 78
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.34 E-value=3.4e-12 Score=112.93 Aligned_cols=83 Identities=28% Similarity=0.401 Sum_probs=77.6
Q ss_pred hhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHH
Q 020810 222 AEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHY 301 (321)
Q Consensus 222 ~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~ 301 (321)
++..+.-..||||+|+..|+.++|..||+..+|+|..+.+|+|||||||.-|.-.+++-|+..|+.++..+.+|.|||..
T Consensus 60 vn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldk 139 (448)
T KOG0195|consen 60 VNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDK 139 (448)
T ss_pred cccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhh
Confidence 35556667899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHH
Q 020810 302 AAG 304 (321)
Q Consensus 302 A~~ 304 (321)
|.-
T Consensus 140 akp 142 (448)
T KOG0195|consen 140 AKP 142 (448)
T ss_pred hch
Confidence 854
No 79
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.33 E-value=1.5e-12 Score=89.72 Aligned_cols=54 Identities=28% Similarity=0.497 Sum_probs=33.7
Q ss_pred hcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHH
Q 020810 216 NAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFA 269 (321)
Q Consensus 216 ~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A 269 (321)
..++..++..|..|.||||+||..|+.++|++|++.|++++.+|..|+||||+|
T Consensus 3 ~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 3 EHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp ---T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred ccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 344556788899999999999999999999999999999999999999999997
No 80
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.29 E-value=6e-12 Score=118.97 Aligned_cols=94 Identities=28% Similarity=0.369 Sum_probs=84.3
Q ss_pred hhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCcc-CCCCcHHH
Q 020810 222 AEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALD-KNKNTALH 300 (321)
Q Consensus 222 ~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d-~~g~TpLh 300 (321)
...-+.+|.|+||-|+..||.+||++||+.|+++|..|.+||||||+|+..+++.+|+.|++.|+.|-... .++.|+..
T Consensus 576 pSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ckqLVe~GaavfAsTlSDmeTa~e 655 (752)
T KOG0515|consen 576 PSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCKQLVESGAAVFASTLSDMETAAE 655 (752)
T ss_pred CCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHHHHHhccceEEeeecccccchhh
Confidence 34557889999999999999999999999999999999999999999999999999999999999886543 57889988
Q ss_pred HHH--HCCcHHHHHHHH
Q 020810 301 YAA--GYGRKECVALLL 315 (321)
Q Consensus 301 ~A~--~~g~~~iv~~Ll 315 (321)
-+- ..|+..|.+||-
T Consensus 656 KCee~eeGY~~CsqyL~ 672 (752)
T KOG0515|consen 656 KCEEMEEGYDQCSQYLY 672 (752)
T ss_pred hcchhhhhHHHHHHHHH
Confidence 774 578899999985
No 81
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.27 E-value=6.4e-12 Score=119.35 Aligned_cols=89 Identities=36% Similarity=0.486 Sum_probs=74.9
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHH
Q 020810 233 VHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVA 312 (321)
Q Consensus 233 Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~ 312 (321)
+.-||..|+.+-|+.|+..|++++..+.+|.|+||-+|.-.+.+||++|+++|++||..|..||||||.|+.+||..+++
T Consensus 44 ~l~A~~~~d~~ev~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~ 123 (527)
T KOG0505|consen 44 FLEACSRGDLEEVRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVE 123 (527)
T ss_pred HHhccccccHHHHHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHHH
Confidence 45567778888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHCCCCC
Q 020810 313 LLLENGAAV 321 (321)
Q Consensus 313 ~Ll~~GAdv 321 (321)
+|+.+||++
T Consensus 124 ~li~~gA~~ 132 (527)
T KOG0505|consen 124 YLIQHGANL 132 (527)
T ss_pred HHHHhhhhh
Confidence 888888864
No 82
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.23 E-value=2.3e-11 Score=119.57 Aligned_cols=96 Identities=26% Similarity=0.296 Sum_probs=91.1
Q ss_pred hhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHH
Q 020810 222 AEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHY 301 (321)
Q Consensus 222 ~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~ 301 (321)
.+..|..|.+|||+|++.|+.++|+.|+.++..+|.....|.||||.|+..||.+++.+|+.+|++.-.+|..+.|+|.+
T Consensus 75 ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldl 154 (854)
T KOG0507|consen 75 LDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDL 154 (854)
T ss_pred hhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHH
Confidence 35556889999999999999999999999998899999999999999999999999999999999999999999999999
Q ss_pred HHHCCcHHHHHHHHHC
Q 020810 302 AAGYGRKECVALLLEN 317 (321)
Q Consensus 302 A~~~g~~~iv~~Ll~~ 317 (321)
|++.|+.++|+.|+..
T Consensus 155 A~qfgr~~Vvq~ll~~ 170 (854)
T KOG0507|consen 155 ASRFGRAEVVQMLLQK 170 (854)
T ss_pred HHHhhhhHHHHHHhhh
Confidence 9999999999999875
No 83
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.21 E-value=2.9e-11 Score=119.92 Aligned_cols=95 Identities=34% Similarity=0.308 Sum_probs=77.1
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC-----------------------CCCCcHHHHHHHCCCHHHHHHHH
Q 020810 226 GNEDESIVHHTASVGDAEGLKNALAAGADKDEED-----------------------SEGRTALHFACGYGEVKCAQILL 282 (321)
Q Consensus 226 d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d-----------------------~~g~TpLh~A~~~g~~~~v~~Ll 282 (321)
.+.|.|+||.|+.+.+.++|++|++.|+|++.+- ..|..||.+|+-.++.+|+++|+
T Consensus 181 eY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl 260 (782)
T KOG3676|consen 181 EYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLL 260 (782)
T ss_pred hhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHH
Confidence 4678888888888888888888888888876541 13677888888888888888888
Q ss_pred HcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCC
Q 020810 283 EAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAA 320 (321)
Q Consensus 283 ~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAd 320 (321)
++|+|++.+|..|+|.||..+.+-..++..+++++||+
T Consensus 261 ~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~ 298 (782)
T KOG3676|consen 261 AHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGAN 298 (782)
T ss_pred hcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCC
Confidence 88888888888888888888888778888888888875
No 84
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.20 E-value=2.1e-10 Score=114.01 Aligned_cols=133 Identities=26% Similarity=0.202 Sum_probs=107.5
Q ss_pred CChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhc-----------CCCCchHHHHHHHcCCHHHHHHH
Q 020810 180 GGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEV-----------GNEDESIVHHTASVGDAEGLKNA 248 (321)
Q Consensus 180 g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~-----------d~~g~t~Lh~Aa~~g~~~~v~~L 248 (321)
.++.|++....+.+.+..|.+.-. |+-.......--..+.+ =+.|..||-+||..++.+++++|
T Consensus 185 qSaLHiAIv~~~~~~V~lLl~~gA-----DV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlL 259 (782)
T KOG3676|consen 185 QSALHIAIVNRDAELVRLLLAAGA-----DVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLL 259 (782)
T ss_pred cchHHHHHHhccHHHHHHHHHcCC-----chhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHH
Confidence 477888888888888888765421 11111111110001111 24688999999999999999999
Q ss_pred HHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCC--CCCccCCCCcHHHHHHHCCcHHHHHHHHHC
Q 020810 249 LAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGAN--VDALDKNKNTALHYAAGYGRKECVALLLEN 317 (321)
Q Consensus 249 l~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~--~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~ 317 (321)
+++|+|++.+|..|+|.||..+..-..++..+++++|++ ...+|..|-|||.+|+.-|..++.+.+++.
T Consensus 260 l~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 260 LAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILER 330 (782)
T ss_pred HhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence 999999999999999999999999889999999999999 888999999999999999999999999986
No 85
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.10 E-value=4.8e-10 Score=114.24 Aligned_cols=87 Identities=23% Similarity=0.258 Sum_probs=77.6
Q ss_pred hcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHc-------CCCC
Q 020810 216 NAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEA-------GANV 288 (321)
Q Consensus 216 ~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~-------ga~~ 288 (321)
..|.+ ++..|..|+||||+||..|+.+++++|+++|++++.+|..|+||||+|+..++.+++++|+.+ |+++
T Consensus 103 ~~Gad-in~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~ga~~ 181 (664)
T PTZ00322 103 TGGAD-PNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSRHSQCHFELGANA 181 (664)
T ss_pred HCCCC-CCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHhCCCcccccCCCC
Confidence 33443 466788999999999999999999999999999999999999999999999999999999998 8888
Q ss_pred CCccCCCCcHHHHHH
Q 020810 289 DALDKNKNTALHYAA 303 (321)
Q Consensus 289 ~~~d~~g~TpLh~A~ 303 (321)
+..+..|.+|+..+.
T Consensus 182 ~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 182 KPDSFTGKPPSLEDS 196 (664)
T ss_pred CccccCCCCccchhh
Confidence 888888888776554
No 86
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.08 E-value=5.3e-10 Score=99.07 Aligned_cols=92 Identities=27% Similarity=0.355 Sum_probs=85.1
Q ss_pred CchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCC-ccCCCCcHHHHHHHCCc
Q 020810 229 DESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDA-LDKNKNTALHYAAGYGR 307 (321)
Q Consensus 229 g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~-~d~~g~TpLh~A~~~g~ 307 (321)
-..+|.-+...++.+....||..--.+|.+|..|.|+|..|+..|++++|++|++.|+|+|. ++..+.||||+|+..|+
T Consensus 12 ~~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn 91 (396)
T KOG1710|consen 12 PKSPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGN 91 (396)
T ss_pred hhhHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCC
Confidence 45788889999999999999988667999999999999999999999999999999999987 46789999999999999
Q ss_pred HHHHHHHHHCCCC
Q 020810 308 KECVALLLENGAA 320 (321)
Q Consensus 308 ~~iv~~Ll~~GAd 320 (321)
.++.++|++.||.
T Consensus 92 ~dvcrllldaGa~ 104 (396)
T KOG1710|consen 92 QDVCRLLLDAGAR 104 (396)
T ss_pred chHHHHHHhccCc
Confidence 9999999999985
No 87
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=99.07 E-value=1.5e-10 Score=108.33 Aligned_cols=91 Identities=34% Similarity=0.407 Sum_probs=85.4
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHc-CCCCCCccCCCCcHHHHHHHC
Q 020810 227 NEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEA-GANVDALDKNKNTALHYAAGY 305 (321)
Q Consensus 227 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~TpLh~A~~~ 305 (321)
.++...+.+|++.|++..++.+.-.|.|++.+|.+.+|+||+|+..|++++|++|++. +.+++.+|++|+|||.-|...
T Consensus 504 ~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F 583 (622)
T KOG0506|consen 504 NDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHF 583 (622)
T ss_pred ccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhc
Confidence 4455679999999999999999999999999999999999999999999999999977 899999999999999999999
Q ss_pred CcHHHHHHHHHC
Q 020810 306 GRKECVALLLEN 317 (321)
Q Consensus 306 g~~~iv~~Ll~~ 317 (321)
+|.+|+++|-++
T Consensus 584 ~h~~v~k~L~~~ 595 (622)
T KOG0506|consen 584 KHKEVVKLLEEA 595 (622)
T ss_pred CcHHHHHHHHHH
Confidence 999999999764
No 88
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.99 E-value=2.8e-09 Score=102.11 Aligned_cols=60 Identities=28% Similarity=0.429 Sum_probs=34.2
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCC
Q 020810 228 EDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGAN 287 (321)
Q Consensus 228 ~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~ 287 (321)
+|+|+||+||..|++.+.++||.+|+|+..+|..|+|+|.||-..|.-+|+.+|+.+|+.
T Consensus 660 ~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~sqec~d~llq~gcp 719 (749)
T KOG0705|consen 660 DGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGSQECIDVLLQYGCP 719 (749)
T ss_pred CCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcccHHHHHHHHHcCCC
Confidence 445555555555555555555555555555555555555555555555555555555543
No 89
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.98 E-value=3.1e-10 Score=112.45 Aligned_cols=83 Identities=29% Similarity=0.374 Sum_probs=78.7
Q ss_pred hhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHH
Q 020810 222 AEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDS-EGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALH 300 (321)
Q Consensus 222 ~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~-~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh 300 (321)
.+..|..|+|+||+++..+..+++++||++|+++..+|. .|+||||-|..+|+++|+-.|+.+|+.+..+|.+|..||.
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq 124 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQ 124 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHH
Confidence 467788999999999999999999999999999999985 5999999999999999999999999999999999999999
Q ss_pred HHHH
Q 020810 301 YAAG 304 (321)
Q Consensus 301 ~A~~ 304 (321)
.-++
T Consensus 125 ~~~r 128 (1267)
T KOG0783|consen 125 FLSR 128 (1267)
T ss_pred HHhh
Confidence 8776
No 90
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.95 E-value=3.3e-09 Score=99.97 Aligned_cols=85 Identities=29% Similarity=0.369 Sum_probs=80.1
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHH
Q 020810 232 IVHHTASVGDAEGLKNALAAGADKDEED-SEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKEC 310 (321)
Q Consensus 232 ~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d-~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~i 310 (321)
-||..++.|++++.-.||..|+++|..+ ..|.||||.|+..|+..-+++|+-+|+|+...|..|.||+.||-..||.++
T Consensus 136 QLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~l 215 (669)
T KOG0818|consen 136 QLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHEL 215 (669)
T ss_pred HHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHH
Confidence 3899999999999999999999999977 469999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH
Q 020810 311 VALLLE 316 (321)
Q Consensus 311 v~~Ll~ 316 (321)
.+-|++
T Consensus 216 aeRl~e 221 (669)
T KOG0818|consen 216 AERLVE 221 (669)
T ss_pred HHHHHH
Confidence 888876
No 91
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=98.88 E-value=1.1e-09 Score=111.41 Aligned_cols=112 Identities=25% Similarity=0.335 Sum_probs=92.9
Q ss_pred cccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCcHHHHHHHCCCHHHHHHHHHcCCC
Q 020810 209 DATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDE-EDSEGRTALHFACGYGEVKCAQILLEAGAN 287 (321)
Q Consensus 209 d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~-~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~ 287 (321)
+.+++++..|.. +..+|..|.+||.+|+-.||..+|+.|+.+.++++. .|+.+.|+|.+||..|+.++|++||..|++
T Consensus 771 e~vellv~rgan-iehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~gan 849 (2131)
T KOG4369|consen 771 EEVELLVVRGAN-IEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAGAN 849 (2131)
T ss_pred HHHHHHHHhccc-ccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHHHhhcc
Confidence 344445555444 567788889999999889999999999988888876 578888999999999999999999999998
Q ss_pred CCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 288 VDALDKNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 288 ~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
...++....|||.+|...|+.++|+.||.+|+.|
T Consensus 850 kehrnvsDytPlsla~Sggy~~iI~~llS~GseI 883 (2131)
T KOG4369|consen 850 KEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEI 883 (2131)
T ss_pred ccccchhhcCchhhhcCcchHHHHHHHhhccccc
Confidence 8888888889999999999999999999888765
No 92
>PF13606 Ank_3: Ankyrin repeat
Probab=98.81 E-value=5.5e-09 Score=62.15 Aligned_cols=28 Identities=57% Similarity=0.694 Sum_probs=21.8
Q ss_pred CCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 294 NKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 294 ~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
+|+||||+|+..|+.++|++|+++|+||
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadv 28 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADV 28 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCC
Confidence 4777888888888888888888887775
No 93
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=98.81 E-value=1.7e-09 Score=110.06 Aligned_cols=94 Identities=31% Similarity=0.413 Sum_probs=89.0
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCC-ccCCCCcHHHHHHHC
Q 020810 227 NEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDA-LDKNKNTALHYAAGY 305 (321)
Q Consensus 227 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~-~d~~g~TpLh~A~~~ 305 (321)
.+-.|+|..||..|+.++|++|+..|+++..+|..|.+||++|+..||..+|+.|+.+.++++. .|+.+.|+|.+||..
T Consensus 755 ~n~~t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsg 834 (2131)
T KOG4369|consen 755 PNIKTNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSG 834 (2131)
T ss_pred ccccccccccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCC
Confidence 3456899999999999999999999999999999999999999999999999999999999987 578999999999999
Q ss_pred CcHHHHHHHHHCCCC
Q 020810 306 GRKECVALLLENGAA 320 (321)
Q Consensus 306 g~~~iv~~Ll~~GAd 320 (321)
|+.++|++||.+||+
T Consensus 835 gr~~vvelLl~~gan 849 (2131)
T KOG4369|consen 835 GRTRVVELLLNAGAN 849 (2131)
T ss_pred CcchHHHHHHHhhcc
Confidence 999999999999985
No 94
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.75 E-value=2.2e-08 Score=95.49 Aligned_cols=87 Identities=31% Similarity=0.470 Sum_probs=74.9
Q ss_pred hHHHHHHHcCCHHHHHHHH--HcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcH
Q 020810 231 SIVHHTASVGDAEGLKNAL--AAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRK 308 (321)
Q Consensus 231 t~Lh~Aa~~g~~~~v~~Ll--~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~ 308 (321)
-+||+++...+.+-+..++ +.+..++..|..|+||||+|+.-|+.++++.|+..|+++..+|..||+|||.|+..|+.
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~ 101 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNE 101 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCH
Confidence 4599999887766665543 34566888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHC
Q 020810 309 ECVALLLEN 317 (321)
Q Consensus 309 ~iv~~Ll~~ 317 (321)
.++..++.+
T Consensus 102 q~i~~vlr~ 110 (560)
T KOG0522|consen 102 QIITEVLRH 110 (560)
T ss_pred HHHHHHHHH
Confidence 887777653
No 95
>PF13606 Ank_3: Ankyrin repeat
Probab=98.75 E-value=1.3e-08 Score=60.51 Aligned_cols=28 Identities=43% Similarity=0.748 Sum_probs=16.9
Q ss_pred CCcHHHHHHHCCCHHHHHHHHHcCCCCC
Q 020810 262 GRTALHFACGYGEVKCAQILLEAGANVD 289 (321)
Q Consensus 262 g~TpLh~A~~~g~~~~v~~Ll~~ga~~~ 289 (321)
|+||||+||..|+.++|++|+++|+|+|
T Consensus 2 G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 2 GNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 5566666666666666666666665554
No 96
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.71 E-value=2.5e-08 Score=95.51 Aligned_cols=95 Identities=29% Similarity=0.340 Sum_probs=87.4
Q ss_pred hhcCCCCchHHHHHHHcCCHHHHHHHHHcCCC--CCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHH
Q 020810 223 EEVGNEDESIVHHTASVGDAEGLKNALAAGAD--KDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALH 300 (321)
Q Consensus 223 ~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~--~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh 300 (321)
-.++.+-.+.||+|+..|+-++|+|+|++|.. ++..|..|.|+||-|+..++..++++|++.|+.+...|..|.||-.
T Consensus 893 l~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg~tp~e 972 (1004)
T KOG0782|consen 893 LIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKGKTPQE 972 (1004)
T ss_pred EeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCCCChHH
Confidence 34566778999999999999999999999865 5778899999999999999999999999999999999999999999
Q ss_pred HHHHCCcHHHHHHHHHC
Q 020810 301 YAAGYGRKECVALLLEN 317 (321)
Q Consensus 301 ~A~~~g~~~iv~~Ll~~ 317 (321)
.|-..|..+++.||-.+
T Consensus 973 raqqa~d~dlaayle~r 989 (1004)
T KOG0782|consen 973 RAQQAGDPDLAAYLESR 989 (1004)
T ss_pred HHHhcCCchHHHHHhhh
Confidence 99999999999999754
No 97
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.69 E-value=2.7e-08 Score=60.53 Aligned_cols=31 Identities=39% Similarity=0.685 Sum_probs=17.9
Q ss_pred CCcHHHHHHHCCCHHHHHHHHHcCCCCCCcc
Q 020810 262 GRTALHFACGYGEVKCAQILLEAGANVDALD 292 (321)
Q Consensus 262 g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d 292 (321)
|+||||+|+.+|+.+++++|+++|++++.+|
T Consensus 2 G~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d 32 (33)
T PF00023_consen 2 GNTPLHYAAQRGHPDIVKLLLKHGADINARD 32 (33)
T ss_dssp SBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred cccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence 5555555555555555555555555555544
No 98
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.63 E-value=1.3e-08 Score=101.27 Aligned_cols=66 Identities=38% Similarity=0.526 Sum_probs=63.2
Q ss_pred CCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccC-CCCcHHHHHHHCCcHHHHHHHHHCCCC
Q 020810 255 KDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDK-NKNTALHYAAGYGRKECVALLLENGAA 320 (321)
Q Consensus 255 ~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~-~g~TpLh~A~~~g~~~iv~~Ll~~GAd 320 (321)
.+.+|..|+|+||+++..+..+++++|+.+|+++..+|. .|+||||.|+.+|+.+|+-+||++|+.
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~S 111 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRS 111 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCc
Confidence 678999999999999999999999999999999999996 699999999999999999999999975
No 99
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.58 E-value=8.9e-08 Score=58.21 Aligned_cols=33 Identities=27% Similarity=0.388 Sum_probs=30.7
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 020810 228 EDESIVHHTASVGDAEGLKNALAAGADKDEEDS 260 (321)
Q Consensus 228 ~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~ 260 (321)
+|+||||+||..|+.+++++||++|++++.+|.
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 489999999999999999999999999998763
No 100
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.51 E-value=2.7e-07 Score=88.71 Aligned_cols=128 Identities=30% Similarity=0.403 Sum_probs=102.0
Q ss_pred cCCCCchhHHHHHHHHhhcCCChhHHHHHHHcCChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCC
Q 020810 148 LTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGN 227 (321)
Q Consensus 148 l~dp~~~~~~~~~~~~l~~~p~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~ 227 (321)
-.+|......+++..+|+.++..+-|+.-+...+ ..+-+.
T Consensus 588 ~~KPs~~s~REEkErwIr~KYeqklFLaPl~~te----------~~lgqq------------------------------ 627 (749)
T KOG0705|consen 588 QTKPSPDSSREEKERWIRAKYEQKLFLAPLPCTE----------EPLGQQ------------------------------ 627 (749)
T ss_pred CcCCCccccHHHHHHHHHHHHHHHhhcCCCCCCC----------CchHHH------------------------------
Confidence 4788888889999999999888877776555321 112222
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHcCCCC----CCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHH
Q 020810 228 EDESIVHHTASVGDAEGLKNALAAGADK----DEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAA 303 (321)
Q Consensus 228 ~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~----~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~ 303 (321)
|..|+...++..+-+||.+|... ...+.+|+|+||+||+.|++.+.++|+-+|+|+-.+|..|+|+|.||-
T Consensus 628 -----Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar 702 (749)
T KOG0705|consen 628 -----LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYAR 702 (749)
T ss_pred -----HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHh
Confidence 33444555667777888887543 234567899999999999999999999999999999999999999999
Q ss_pred HCCcHHHHHHHHHCCCC
Q 020810 304 GYGRKECVALLLENGAA 320 (321)
Q Consensus 304 ~~g~~~iv~~Ll~~GAd 320 (321)
..|.-+|+.+|+.+|+.
T Consensus 703 ~a~sqec~d~llq~gcp 719 (749)
T KOG0705|consen 703 QAGSQECIDVLLQYGCP 719 (749)
T ss_pred hcccHHHHHHHHHcCCC
Confidence 99999999999999974
No 101
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.44 E-value=8.2e-07 Score=81.71 Aligned_cols=74 Identities=20% Similarity=0.284 Sum_probs=64.5
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHC
Q 020810 231 SIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGY 305 (321)
Q Consensus 231 t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~ 305 (321)
--|+.||+.|+++.|++|++.|+++|..|....+||.+|+-.||..+|++|+++|+-...-..+|..+ ||++.+
T Consensus 38 ~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC-~YgaLn 111 (516)
T KOG0511|consen 38 GELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRC-HYGALN 111 (516)
T ss_pred HHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchh-hhhhhh
Confidence 34899999999999999999999999999999999999999999999999999999877655666655 444443
No 102
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.38 E-value=5.9e-07 Score=82.63 Aligned_cols=57 Identities=40% Similarity=0.573 Sum_probs=54.6
Q ss_pred CcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCC
Q 020810 263 RTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGA 319 (321)
Q Consensus 263 ~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GA 319 (321)
.--|..||+.|..+.|++|++.|.++|.+|+....||.+|+.+||.++|++||++||
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGA 93 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGA 93 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCC
Confidence 345899999999999999999999999999999999999999999999999999998
No 103
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.31 E-value=4.4e-07 Score=85.55 Aligned_cols=66 Identities=29% Similarity=0.325 Sum_probs=60.6
Q ss_pred hhhhcCCCCchHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCC
Q 020810 221 EAEEVGNEDESIVHHTASVGDAEGLKNALA-AGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGA 286 (321)
Q Consensus 221 ~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~-~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga 286 (321)
+...+|++.+|+||.||..|+++++++||. ++.+++.+|+||+|||--|..++|.+|+++|-+.-.
T Consensus 531 D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~~v~k~L~~~~~ 597 (622)
T KOG0506|consen 531 DLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHKEVVKLLEEAQY 597 (622)
T ss_pred cccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcHHHHHHHHHHhc
Confidence 357889999999999999999999999996 589999999999999999999999999999987643
No 104
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.30 E-value=6.1e-07 Score=92.01 Aligned_cols=90 Identities=32% Similarity=0.406 Sum_probs=83.0
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHC
Q 020810 226 GNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGY 305 (321)
Q Consensus 226 d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~ 305 (321)
-..|.|+||.|+..|..-++++|++.|+++|.+|..|+||||.+...|+...+..|+++|++.+..+.+|.+||++|...
T Consensus 653 ~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~ 732 (785)
T KOG0521|consen 653 LCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEA 732 (785)
T ss_pred hhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhh
Confidence 35679999999999999999999999999999999999999999999999999999999999999999999999999877
Q ss_pred CcHHHHHHHH
Q 020810 306 GRKECVALLL 315 (321)
Q Consensus 306 g~~~iv~~Ll 315 (321)
.+.+++-+|.
T Consensus 733 ~~~d~~~l~~ 742 (785)
T KOG0521|consen 733 ANADIVLLLR 742 (785)
T ss_pred ccccHHHHHh
Confidence 7777665553
No 105
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.30 E-value=1.8e-06 Score=86.82 Aligned_cols=93 Identities=19% Similarity=0.129 Sum_probs=79.2
Q ss_pred hhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCC----------Cc
Q 020810 222 AEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVD----------AL 291 (321)
Q Consensus 222 ~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~----------~~ 291 (321)
++..|.-|+++||.|..+.+.+++++|++++..+ .-+|.+|+..|..++|+.++.+..... ..
T Consensus 55 inc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ 127 (822)
T KOG3609|consen 55 INCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPH 127 (822)
T ss_pred hhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHHHHHHHHHHHHHHHHhcccccchhccccccCccc
Confidence 4677889999999999999999999999997665 347899999999999999998743321 11
Q ss_pred cCCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 292 DKNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 292 d~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
-.-+.|||.+|+..++.+|+++||.+|++|
T Consensus 128 ft~ditPliLAAh~NnyEil~~Ll~kg~~i 157 (822)
T KOG3609|consen 128 FTPDITPLMLAAHLNNFEILQCLLTRGHCI 157 (822)
T ss_pred CCCCccHHHHHHHhcchHHHHHHHHcCCCC
Confidence 235789999999999999999999999975
No 106
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.28 E-value=2.1e-06 Score=81.46 Aligned_cols=76 Identities=22% Similarity=0.211 Sum_probs=67.7
Q ss_pred cccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHc
Q 020810 209 DATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEA 284 (321)
Q Consensus 209 d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ 284 (321)
++...++..|++.+..-...|.||||.|++.|+..-+++|+-+|+|+...|.+|.||+.||-..||.++.+-|++.
T Consensus 147 et~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~laeRl~e~ 222 (669)
T KOG0818|consen 147 ETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHELAERLVEI 222 (669)
T ss_pred HHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHHHHHHHHH
Confidence 4556777888888877788999999999999999999999999999999999999999999999998887766653
No 107
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.23 E-value=6.7e-07 Score=91.60 Aligned_cols=95 Identities=32% Similarity=0.388 Sum_probs=77.0
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCcHHHHHHHCCCHHHHHHHH-HcCCCCCCccCCCCcHHHHH
Q 020810 225 VGNEDESIVHHTASVGDAEGLKNALAA-GADKDEEDSEGRTALHFACGYGEVKCAQILL-EAGANVDALDKNKNTALHYA 302 (321)
Q Consensus 225 ~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~-g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll-~~ga~~~~~d~~g~TpLh~A 302 (321)
....|++.+|+++..++...++.+++. |......|..|.-.+|+ |..++.+++-+|+ -.|..++.+|..||||||||
T Consensus 570 ~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wA 648 (975)
T KOG0520|consen 570 VNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWTPLHWA 648 (975)
T ss_pred CCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhH-hhhcCCceeEEEEeecccccccccCCCCcccchH
Confidence 356788999999999999999999886 66666778888888888 4455555554444 55888999999999999999
Q ss_pred HHCCcHHHHHHHHHCCCC
Q 020810 303 AGYGRKECVALLLENGAA 320 (321)
Q Consensus 303 ~~~g~~~iv~~Ll~~GAd 320 (321)
+.+|+..++..|++.|++
T Consensus 649 a~~G~e~l~a~l~~lga~ 666 (975)
T KOG0520|consen 649 AFRGREKLVASLIELGAD 666 (975)
T ss_pred hhcCHHHHHHHHHHhccc
Confidence 999999999999988875
No 108
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.14 E-value=4.6e-06 Score=79.89 Aligned_cols=65 Identities=23% Similarity=0.290 Sum_probs=59.2
Q ss_pred chhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHc
Q 020810 220 DEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEA 284 (321)
Q Consensus 220 ~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ 284 (321)
..++.+|..|+||||+|+..|+...++.|+..|+++..++..||++||-|+.+|+..++..++.+
T Consensus 46 ~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 46 LVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQIITEVLRH 110 (560)
T ss_pred ceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999998877666543
No 109
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.10 E-value=5e-06 Score=80.05 Aligned_cols=89 Identities=24% Similarity=0.344 Sum_probs=77.7
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCC--CCCccCCCCcHHHHHHHCCcHHH
Q 020810 233 VHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGAN--VDALDKNKNTALHYAAGYGRKEC 310 (321)
Q Consensus 233 Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~--~~~~d~~g~TpLh~A~~~g~~~i 310 (321)
|..|+..+++--+..+...|.++-.++.+.+|.||||+..|+.++|+|++++|.. ++..|..|.|+||-|+..++..+
T Consensus 870 il~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~v 949 (1004)
T KOG0782|consen 870 ILRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAV 949 (1004)
T ss_pred HHHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHH
Confidence 5567777777666667777888888899999999999999999999999999864 57778899999999999999999
Q ss_pred HHHHHHCCCCC
Q 020810 311 VALLLENGAAV 321 (321)
Q Consensus 311 v~~Ll~~GAdv 321 (321)
..+|++.||.+
T Consensus 950 c~~lvdagasl 960 (1004)
T KOG0782|consen 950 CQLLVDAGASL 960 (1004)
T ss_pred HHHHHhcchhh
Confidence 99999999863
No 110
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.04 E-value=1.1e-05 Score=68.02 Aligned_cols=73 Identities=16% Similarity=0.070 Sum_probs=64.9
Q ss_pred chhhhcCCCCchHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCcc
Q 020810 220 DEAEEVGNEDESIVHHTASVGDAEGLKNALAAG-ADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALD 292 (321)
Q Consensus 220 ~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g-~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d 292 (321)
..++.+|..|+|+|++|+..|..+.|.||+.+| +.+...|..+.+++.+|-..|+.++|..|.+...+-...+
T Consensus 3 ~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ets~p~ 76 (223)
T KOG2384|consen 3 GNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRETSHPM 76 (223)
T ss_pred CCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccCCCcc
Confidence 346788999999999999999999999999999 8899999999999999999999999999998855544443
No 111
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.01 E-value=1.3e-05 Score=67.59 Aligned_cols=66 Identities=30% Similarity=0.293 Sum_probs=62.7
Q ss_pred CCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcC-CCCCCccCCCCcHHHHHHHCCcHHHHHHHHHC
Q 020810 252 GADKDEEDSEGRTALHFACGYGEVKCAQILLEAG-ANVDALDKNKNTALHYAAGYGRKECVALLLEN 317 (321)
Q Consensus 252 g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~ 317 (321)
+.++|.+|..|||+|+.|+..|.-+.|.||+.+| +.+...|..+.+++.+|-..|..++|+.|.+.
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~ 68 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEN 68 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHH
Confidence 4578999999999999999999999999999999 89999999999999999999999999999875
No 112
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.53 E-value=5.9e-05 Score=77.68 Aligned_cols=70 Identities=36% Similarity=0.509 Sum_probs=62.3
Q ss_pred cCCCCCC--CCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCC
Q 020810 251 AGADKDE--EDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAA 320 (321)
Q Consensus 251 ~g~~~~~--~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAd 320 (321)
++++++. .-..|.|+||.|+.++..-++++|++.|+++|..|..|+||||.+...|+...+..|+++||+
T Consensus 643 ~~~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~ 714 (785)
T KOG0521|consen 643 HGCCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGAD 714 (785)
T ss_pred chhhhccchhhhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhcccccc
Confidence 3444443 224579999999999999999999999999999999999999999999999999999999987
No 113
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.51 E-value=5.3e-05 Score=78.00 Aligned_cols=93 Identities=28% Similarity=0.300 Sum_probs=73.9
Q ss_pred hhcCCCCchHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCC------ccCCC
Q 020810 223 EEVGNEDESIVHHTASVGDAEGLKNAL-AAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDA------LDKNK 295 (321)
Q Consensus 223 ~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll-~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~------~d~~g 295 (321)
...|.+|.-.+|++ ..++.+++-+|+ ..|..++.+|..||||||||+.+|+..++..|++.|++... ..-.|
T Consensus 602 ~eld~d~qgV~hfc-a~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g 680 (975)
T KOG0520|consen 602 LELDRDGQGVIHFC-AALGYEWAFLPISADGVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGG 680 (975)
T ss_pred hhhcccCCChhhHh-hhcCCceeEEEEeecccccccccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCC
Confidence 34466677778884 555556555544 67899999999999999999999999999999988766433 33469
Q ss_pred CcHHHHHHHCCcHHHHHHHHH
Q 020810 296 NTALHYAAGYGRKECVALLLE 316 (321)
Q Consensus 296 ~TpLh~A~~~g~~~iv~~Ll~ 316 (321)
.|+-..|...|+..+..+|-+
T Consensus 681 ~ta~~la~s~g~~gia~~lse 701 (975)
T KOG0520|consen 681 KTAADLARANGHKGIAGYLSE 701 (975)
T ss_pred CchhhhhhcccccchHHHHhh
Confidence 999999999999999888754
No 114
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.27 E-value=0.00044 Score=66.12 Aligned_cols=63 Identities=22% Similarity=0.318 Sum_probs=55.1
Q ss_pred CHHHHHHHHHcCCCCCC------CCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHH
Q 020810 241 DAEGLKNALAAGADKDE------EDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAA 303 (321)
Q Consensus 241 ~~~~v~~Ll~~g~~~~~------~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~ 303 (321)
-...+++|.+++++.|. .+..-.|+||||+..|...||.+||+.|+|+..+|..|.||..++.
T Consensus 403 ~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 403 EPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred chhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 36788999998877644 3455789999999999999999999999999999999999999876
No 115
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.16 E-value=0.00075 Score=37.66 Aligned_cols=26 Identities=50% Similarity=0.644 Sum_probs=17.1
Q ss_pred CCcHHHHHHHCCcHHHHHHHHHCCCC
Q 020810 295 KNTALHYAAGYGRKECVALLLENGAA 320 (321)
Q Consensus 295 g~TpLh~A~~~g~~~iv~~Ll~~GAd 320 (321)
|.||||+|+..++.+++++|+++|.+
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~ 27 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGAD 27 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 55666666666666666666666654
No 116
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.87 E-value=0.0022 Score=35.63 Aligned_cols=26 Identities=42% Similarity=0.810 Sum_probs=13.7
Q ss_pred CCcHHHHHHHCCCHHHHHHHHHcCCC
Q 020810 262 GRTALHFACGYGEVKCAQILLEAGAN 287 (321)
Q Consensus 262 g~TpLh~A~~~g~~~~v~~Ll~~ga~ 287 (321)
|.||+|+|+..++.+++++|+..+.+
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~ 27 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGAD 27 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 44555555555555555555555443
No 117
>smart00727 STI1 Heat shock chaperonin-binding motif.
Probab=96.63 E-value=0.00057 Score=43.46 Aligned_cols=34 Identities=18% Similarity=0.289 Sum_probs=23.2
Q ss_pred CCCCCChhcHHHHHhhcCCchHHHHHHHHhc-CchHHH
Q 020810 49 GGAAPNPFDFSAMSGLLNDPSIKELAEQIAK-DPAFNS 85 (321)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~p~~~~ 85 (321)
..++.||...+.++.|++||.+ ..++++ ||.+++
T Consensus 5 ~~~l~~P~~~~~l~~~~~nP~~---~~~~~~~nP~~~~ 39 (41)
T smart00727 5 ALRLQNPQVQSLLQDMQQNPDM---LAQMLQENPQLLQ 39 (41)
T ss_pred HHHHcCHHHHHHHHHHHHCHHH---HHHHHHhCHHhHh
Confidence 3456688888888888888843 344666 887654
No 118
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.14 E-value=0.017 Score=55.67 Aligned_cols=54 Identities=22% Similarity=0.376 Sum_probs=45.6
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHH
Q 020810 226 GNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILL 282 (321)
Q Consensus 226 d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll 282 (321)
++.-.|+||+|+..|...+|.+||+.|+|+..+|..|+||..++. +.++-..++
T Consensus 427 ~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~---nkdVk~~F~ 480 (591)
T KOG2505|consen 427 DYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA---NKDVKSIFI 480 (591)
T ss_pred ccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc---cHHHHHHHH
Confidence 455679999999999999999999999999999999999998876 444444443
No 119
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=96.06 E-value=0.0083 Score=61.14 Aligned_cols=83 Identities=27% Similarity=0.264 Sum_probs=71.5
Q ss_pred CchHHHHHHHcCCHHHHHHHHHcC----CCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHH
Q 020810 229 DESIVHHTASVGDAEGLKNALAAG----ADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAG 304 (321)
Q Consensus 229 g~t~Lh~Aa~~g~~~~v~~Ll~~g----~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~ 304 (321)
+.--...||.+|+...|+..++.. .++|..|.-|+++||.|..+.+.+++++|+++...+ ..+|.+|+.
T Consensus 25 ~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~aI~ 97 (822)
T KOG3609|consen 25 GEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLAIA 97 (822)
T ss_pred hhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHHHHH
Confidence 334466789999999999998753 457889999999999999999999999999987665 339999999
Q ss_pred CCcHHHHHHHHHCC
Q 020810 305 YGRKECVALLLENG 318 (321)
Q Consensus 305 ~g~~~iv~~Ll~~G 318 (321)
.|..++|++++.+-
T Consensus 98 ~~~v~~VE~ll~~~ 111 (822)
T KOG3609|consen 98 VGSVPLVELLLVHF 111 (822)
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999999863
No 120
>smart00727 STI1 Heat shock chaperonin-binding motif.
Probab=95.99 E-value=0.008 Score=38.10 Aligned_cols=21 Identities=19% Similarity=0.520 Sum_probs=17.8
Q ss_pred HhhcCCchHHHHHHHHhcCch
Q 020810 62 SGLLNDPSIKELAEQIAKDPA 82 (321)
Q Consensus 62 ~~~~~~p~~~~~~~~~~~~p~ 82 (321)
.++|+||.+.++.++|++||+
T Consensus 5 ~~~l~~P~~~~~l~~~~~nP~ 25 (41)
T smart00727 5 ALRLQNPQVQSLLQDMQQNPD 25 (41)
T ss_pred HHHHcCHHHHHHHHHHHHCHH
Confidence 357789999999999999994
No 121
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=94.10 E-value=0.25 Score=43.28 Aligned_cols=89 Identities=17% Similarity=0.217 Sum_probs=63.4
Q ss_pred chHHHHHHHcCCHHHHHHHHHcCCCCCCCC----CCCCcHHHHHHH--CCCHHHHHHHHHcC-CCCCCc---cCCCCcHH
Q 020810 230 ESIVHHTASVGDAEGLKNALAAGADKDEED----SEGRTALHFACG--YGEVKCAQILLEAG-ANVDAL---DKNKNTAL 299 (321)
Q Consensus 230 ~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d----~~g~TpLh~A~~--~g~~~~v~~Ll~~g-a~~~~~---d~~g~TpL 299 (321)
.+++-++...+..+++-+|+..= .....| ..+.--+-|+.. .....++++++.+| +++|.+ -..|.|-|
T Consensus 180 ~~Am~~si~~~K~dva~~lls~f-~ft~~dv~~~~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtML 258 (284)
T PF06128_consen 180 HQAMWLSIGNAKEDVALYLLSKF-NFTKQDVASMEKELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTML 258 (284)
T ss_pred HHHHHHHhcccHHHHHHHHHhhc-ceecchhhhcCcchhhHHHHHhhcCCcHHHHHHHHhccccccchhhhccCCcchHH
Confidence 46778888888889999988641 111111 112223444433 34577899999998 566653 45799999
Q ss_pred HHHHHCCcHHHHHHHHHCCC
Q 020810 300 HYAAGYGRKECVALLLENGA 319 (321)
Q Consensus 300 h~A~~~g~~~iv~~Ll~~GA 319 (321)
.-|..+++.+++.+||++||
T Consensus 259 DNA~Ky~~~emi~~Llk~GA 278 (284)
T PF06128_consen 259 DNAMKYKNSEMIAFLLKYGA 278 (284)
T ss_pred HhHHhcCcHHHHHHHHHcCc
Confidence 99999999999999999998
No 122
>KOG0553 consensus TPR repeat-containing protein [General function prediction only]
Probab=93.11 E-value=0.16 Score=46.27 Aligned_cols=26 Identities=38% Similarity=0.599 Sum_probs=19.4
Q ss_pred hhcHHHH-HhhcCCchHHHHHHHHhcC
Q 020810 55 PFDFSAM-SGLLNDPSIKELAEQIAKD 80 (321)
Q Consensus 55 ~~~~~~~-~~~~~~p~~~~~~~~~~~~ 80 (321)
|..+++. .+|||||++++++++||+|
T Consensus 219 Pd~~s~~~~~l~nnp~l~~~~~~m~~~ 245 (304)
T KOG0553|consen 219 PDSRSMFNGDLMNNPQLMQLASQMMKD 245 (304)
T ss_pred ccchhhhccccccCHHHHHHHHHHhhc
Confidence 5445544 4888999999988888884
No 123
>KOG0010 consensus Ubiquitin-like protein [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=87.70 E-value=1.6 Score=42.50 Aligned_cols=37 Identities=30% Similarity=0.534 Sum_probs=17.1
Q ss_pred hhcCcHHHHHHHHHH--hhhcCCChh-hHHHHhcCCCCch
Q 020810 118 VMQNPQFMTMAERLG--NALMQDPSM-SHMMESLTNPTKK 154 (321)
Q Consensus 118 ~m~np~~~~m~e~l~--~~~~~~p~l-~~m~~~l~dp~~~ 154 (321)
++.||++.+++++.- ..+.++|.+ +..+....+|...
T Consensus 182 I~anPqmq~lm~~npei~h~ln~p~i~rQtle~arNP~m~ 221 (493)
T KOG0010|consen 182 IMANPQMQDLMQRNPEIGHLLNNPLILRQTLESARNPEMM 221 (493)
T ss_pred HhcCHHHHHHHhhCCcchhhhcChHHHHHHHHhccCHHHH
Confidence 455666666666542 233333333 2333444444443
No 124
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=85.82 E-value=1.5 Score=31.65 Aligned_cols=48 Identities=19% Similarity=0.197 Sum_probs=39.2
Q ss_pred chHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHc
Q 020810 230 ESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEA 284 (321)
Q Consensus 230 ~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ 284 (321)
...+..|+..|+.++++.+++.+ .++ ...+.+|+...+-+++++|++.
T Consensus 7 ~~tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 7 KKTLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 35688999999999999998765 222 4569999999999999999876
No 125
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=85.02 E-value=5.2 Score=34.09 Aligned_cols=46 Identities=24% Similarity=0.312 Sum_probs=40.1
Q ss_pred HHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHH
Q 020810 265 ALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLE 316 (321)
Q Consensus 265 pLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~ 316 (321)
-|.+|+..|-+..+.-.+.+|.+++. +.|..|+.++|..++.+++.
T Consensus 146 hl~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 146 HLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhhc
Confidence 36789999999999889999988764 69999999999999999875
No 126
>KOG0553 consensus TPR repeat-containing protein [General function prediction only]
Probab=82.39 E-value=1.1 Score=40.88 Aligned_cols=20 Identities=25% Similarity=0.323 Sum_probs=18.1
Q ss_pred CCCCCChhcHHHHHhhcCCc
Q 020810 49 GGAAPNPFDFSAMSGLLNDP 68 (321)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~p 68 (321)
++||+||++++.+.+||.|+
T Consensus 227 ~~l~nnp~l~~~~~~m~~~~ 246 (304)
T KOG0553|consen 227 GDLMNNPQLMQLASQMMKDG 246 (304)
T ss_pred cccccCHHHHHHHHHHhhcc
Confidence 69999999999999999854
No 127
>PF09280 XPC-binding: XPC-binding domain; InterPro: IPR015360 Members of this entry adopt a structure consisting of four alpha helices, arranged in an array. They bind specifically and directly to the xeroderma pigmentosum group C protein (XPC) to initiate nucleotide excision repair []. ; GO: 0003684 damaged DNA binding, 0006289 nucleotide-excision repair, 0043161 proteasomal ubiquitin-dependent protein catabolic process; PDB: 1PVE_A 1QZE_A 1OQY_A 1TP4_A 1X3W_B 3ESW_B 2QSG_X 2QSF_X 1X3Z_B 2QSH_X ....
Probab=82.12 E-value=2.1 Score=29.45 Aligned_cols=38 Identities=21% Similarity=0.484 Sum_probs=19.1
Q ss_pred CCCChhcHHHHHh-hcCCchHHH-HHHHHh-cCchHHHHHHH
Q 020810 51 AAPNPFDFSAMSG-LLNDPSIKE-LAEQIA-KDPAFNSMAEQ 89 (321)
Q Consensus 51 ~~~~~~~~~~~~~-~~~~p~~~~-~~~~~~-~~p~~~~maeq 89 (321)
+.++| .|..+.+ +-.||++.+ +.++|. +||++.+.-.+
T Consensus 4 Lr~~P-qf~~lR~~vq~NP~lL~~lLqql~~~nP~l~q~I~~ 44 (59)
T PF09280_consen 4 LRNNP-QFQQLRQLVQQNPQLLPPLLQQLGQSNPQLLQLIQQ 44 (59)
T ss_dssp GTTSH-HHHHHHHHHHC-GGGHHHHHHHHHCCSHHHHHHHHH
T ss_pred HHcCh-HHHHHHHHHHHCHHHHHHHHHHHhccCHHHHHHHHH
Confidence 45566 4454544 336665443 444443 46666555555
No 128
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=80.82 E-value=3.3 Score=29.77 Aligned_cols=47 Identities=30% Similarity=0.374 Sum_probs=38.1
Q ss_pred cHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHC
Q 020810 264 TALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLEN 317 (321)
Q Consensus 264 TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~ 317 (321)
.-+.+|+..|+.++++.+++.+ .++ ...|.+|+...+.+++++|++.
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 4578999999999999988765 221 4489999999999999999864
No 129
>PF09280 XPC-binding: XPC-binding domain; InterPro: IPR015360 Members of this entry adopt a structure consisting of four alpha helices, arranged in an array. They bind specifically and directly to the xeroderma pigmentosum group C protein (XPC) to initiate nucleotide excision repair []. ; GO: 0003684 damaged DNA binding, 0006289 nucleotide-excision repair, 0043161 proteasomal ubiquitin-dependent protein catabolic process; PDB: 1PVE_A 1QZE_A 1OQY_A 1TP4_A 1X3W_B 3ESW_B 2QSG_X 2QSF_X 1X3Z_B 2QSH_X ....
Probab=76.45 E-value=3.7 Score=28.23 Aligned_cols=21 Identities=24% Similarity=0.513 Sum_probs=16.1
Q ss_pred HhhcCCchHHHHHHHHhcCch
Q 020810 62 SGLLNDPSIKELAEQIAKDPA 82 (321)
Q Consensus 62 ~~~~~~p~~~~~~~~~~~~p~ 82 (321)
..|+++|.|.+|-+.+.+||+
T Consensus 2 ~~Lr~~Pqf~~lR~~vq~NP~ 22 (59)
T PF09280_consen 2 EFLRNNPQFQQLRQLVQQNPQ 22 (59)
T ss_dssp GGGTTSHHHHHHHHHHHC-GG
T ss_pred hHHHcChHHHHHHHHHHHCHH
Confidence 357888988888888888884
No 130
>KOG2857 consensus Predicted MYND Zn-finger protein/hormone receptor interactor [Transcription]
Probab=75.26 E-value=2.2 Score=34.46 Aligned_cols=36 Identities=25% Similarity=0.525 Sum_probs=22.6
Q ss_pred HHHHhhcCCchHHHHHHH-------------HhcCchHHHHHHHHHhhh
Q 020810 59 SAMSGLLNDPSIKELAEQ-------------IAKDPAFNSMAEQLQKTL 94 (321)
Q Consensus 59 ~~~~~~~~~p~~~~~~~~-------------~~~~p~~~~maeq~~~~~ 94 (321)
|-+.+|+.||.++++.++ .|+-|.|...|.-....+
T Consensus 88 seLrsll~dp~Lr~Li~sid~~~n~~kel~aamqeelfvefadailq~v 136 (157)
T KOG2857|consen 88 SELRSLLEDPHLRNLIESIDELLNIMKELVAAMQEELFVEFADAILQQV 136 (157)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHhhHHHHHHHHhcchHHHHHHHHHHHhh
Confidence 445678888888887766 345566666555544433
No 131
>PF11212 DUF2999: Protein of unknown function (DUF2999); InterPro: IPR021376 This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
Probab=74.41 E-value=8.3 Score=27.38 Aligned_cols=55 Identities=33% Similarity=0.517 Sum_probs=38.5
Q ss_pred cCCchHHHHHHHHhcCchHHHHHHHHHhhhccCCccccCCCCChhhhHHHHHHhhcCcHHHHH-HHHHH
Q 020810 65 LNDPSIKELAEQIAKDPAFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQNPQFMTM-AERLG 132 (321)
Q Consensus 65 ~~~p~~~~~~~~~~~~p~~~~maeq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~np~~~~m-~e~l~ 132 (321)
.+|-.|.++-+-+-+|| |+.||---|-++ -+.+.|..|-++|+||.+-+- .+.+|
T Consensus 13 vsd~qi~elFq~lT~NP-l~AMa~i~qLGi------------p~eKLQ~lm~~VMqnP~LikeAv~ELg 68 (82)
T PF11212_consen 13 VSDEQINELFQALTQNP-LAAMATIQQLGI------------PQEKLQQLMAQVMQNPALIKEAVEELG 68 (82)
T ss_pred CCHHHHHHHHHHHhhCH-HHHHHHHHHcCC------------CHHHHHHHHHHHhcChHHHHHHHHHhC
Confidence 46778888888888999 777776544333 244667888999999987433 34454
No 132
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=73.72 E-value=6.3 Score=33.59 Aligned_cols=45 Identities=20% Similarity=0.209 Sum_probs=40.5
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHH
Q 020810 233 VHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLE 283 (321)
Q Consensus 233 Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~ 283 (321)
|.+|+..|-+..|...|++|-+++. +.|..|+.+.|..++.+++.
T Consensus 147 l~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 147 LEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhhc
Confidence 6789999999999999999988753 78999999999999999874
No 133
>PF06757 Ins_allergen_rp: Insect allergen related repeat, nitrile-specifier detoxification; InterPro: IPR010629 This entry represents several insect specific allergen repeats. These repeats are commonly found in various proteins from cockroaches, fruit flies and mosquitos. It has been suggested that the repeat sequences have evolved by duplication of an ancestral amino acid domain, which may have arisen from the mitochondrial energy transfer proteins []. This family exemplifies a case of novel gene evolution. The case in point is the arms-race between plants and their infective insective herbivores in the area of the glucosinolate-myrosinase system. Brassicas have developed the glucosinolate-myrosinase system as chemical defence mechanism against the insects, and consequently the insects have adapted to produce a detoxifying molecule, nitrile-specifier protein (NSP). NSP is present in the Pieris rapae (Cabbage white butterfly). NSP is structurally different from and has no amino acid homology to any known detoxifying enzymes, and it appears to have arisen by a process of domain and gene duplication of a sequence of unknown function that is widespread in insect species and referred to as insect-allergen-repeat protein. Thus this family is found either as a single domain or as a multiple repeat-domain [].
Probab=73.71 E-value=21 Score=30.25 Aligned_cols=131 Identities=14% Similarity=0.281 Sum_probs=70.0
Q ss_pred CChhcHHHHHhhcCCchHHHHHHHHhcCchHHHHHHHHHhhhccCCccccCCCCChhhhHHHHHHhhcCcHHHHHHHHHH
Q 020810 53 PNPFDFSAMSGLLNDPSIKELAEQIAKDPAFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQNPQFMTMAERLG 132 (321)
Q Consensus 53 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~maeq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~np~~~~m~e~l~ 132 (321)
.+| -|+.+-.-|+.+.++++..++.+.|.|+..-+-+++..- |...|.+.+..+..-|.+......-.
T Consensus 30 ~D~-efq~~~~yl~s~~f~~l~~~l~~~pE~~~l~~yL~~~gl-----------dv~~~i~~i~~~l~~~~~~p~~~~~~ 97 (179)
T PF06757_consen 30 EDA-EFQAAVRYLNSSEFKQLWQQLEALPEVKALLDYLESAGL-----------DVYYYINQINDLLGLPPLNPTPSLSC 97 (179)
T ss_pred cCH-HHHHHHHHHcChHHHHHHHHHHcCHHHHHHHHHHHHCCC-----------CHHHHHHHHHHHHcCCcCCCCccccc
Confidence 455 445555666777788888888888888888888775442 33344444444443222200000000
Q ss_pred hhhcCCChhhHHHHhcCCCCchhHHHH-HHHHhhcCCChhHHHHHHHcCChHHHH-HHhCChhHHHHH
Q 020810 133 NALMQDPSMSHMMESLTNPTKKDQIEE-RMAKIKEDPSLKPILDEIESGGPSAMM-KYWNDKDVLQKL 198 (321)
Q Consensus 133 ~~~~~~p~l~~m~~~l~dp~~~~~~~~-~~~~l~~~p~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~l 198 (321)
..-..+..++..+.......++.. ...++++++.++.+++.+.+.....+. ..|.++.+...+
T Consensus 98 ---~~~~g~~g~~~di~~~lP~~~l~aL~~~K~~~s~~F~~f~~~l~S~ef~~~~~~~~~~~~~~~~~ 162 (179)
T PF06757_consen 98 ---SRGGGLNGFVDDILALLPRDKLRALYEEKLATSPEFAEFVEALRSPEFQQLYNALWASPEFQRLL 162 (179)
T ss_pred ---ccCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHcCHHHHHHHHHHHcCHHHHHHH
Confidence 011122333333444444444444 335667788888888888877655444 445555544443
No 134
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=73.29 E-value=7.3 Score=34.39 Aligned_cols=56 Identities=23% Similarity=0.243 Sum_probs=44.4
Q ss_pred HHHHHHc--CCHHHHHHHHHcC-CCCCC---CCCCCCcHHHHHHHCCCHHHHHHHHHcCCCC
Q 020810 233 VHHTASV--GDAEGLKNALAAG-ADKDE---EDSEGRTALHFACGYGEVKCAQILLEAGANV 288 (321)
Q Consensus 233 Lh~Aa~~--g~~~~v~~Ll~~g-~~~~~---~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~ 288 (321)
+-++.+. -+..+++++|..| +++|. +-..|.|-|--|..++..+++.+|+.+|+-.
T Consensus 219 ieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 219 IEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAIS 280 (284)
T ss_pred HHHHHhhcCCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCccc
Confidence 4444433 4578899999998 66665 3467999999999999999999999999844
No 135
>KOG1308 consensus Hsp70-interacting protein Hip/Transient component of progesterone receptor complexes and an Hsp70-binding protein [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=68.32 E-value=15 Score=34.57 Aligned_cols=9 Identities=44% Similarity=0.881 Sum_probs=5.3
Q ss_pred HHhhcCCch
Q 020810 61 MSGLLNDPS 69 (321)
Q Consensus 61 ~~~~~~~p~ 69 (321)
..++|+||.
T Consensus 321 i~ki~~dpe 329 (377)
T KOG1308|consen 321 ISKILSDPE 329 (377)
T ss_pred HhhhcCchH
Confidence 455666663
No 136
>KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones]
Probab=68.21 E-value=11 Score=37.16 Aligned_cols=48 Identities=31% Similarity=0.551 Sum_probs=37.1
Q ss_pred HhhcCCchHHHHHHHHhcCchHHHHHHHHHhhhccCCccccCCCCChhhhHHHHHHhhcCcHHHHHHHHHH
Q 020810 62 SGLLNDPSIKELAEQIAKDPAFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQNPQFMTMAERLG 132 (321)
Q Consensus 62 ~~~~~~p~~~~~~~~~~~~p~~~~maeq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~np~~~~m~e~l~ 132 (321)
++-|.||.+++ |++||.++++.+|+|+.. ..+.-|+||.+.+.++.+.
T Consensus 484 ~r~~~dpev~~----il~d~~m~~~l~q~q~~p-------------------a~~~~~~n~~v~~ki~~l~ 531 (539)
T KOG0548|consen 484 RRAMADPEVQA----ILQDPAMRQILEQMQENP-------------------ALQEHLKNPMVMQKIEKLI 531 (539)
T ss_pred HhhccCHHHHH----HHcCHHHHHHHHHHHhCH-------------------HHHHHHhccHHHHHHHHHH
Confidence 45788887777 688888888888887643 4446788999999988874
No 137
>KOG1308 consensus Hsp70-interacting protein Hip/Transient component of progesterone receptor complexes and an Hsp70-binding protein [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=67.08 E-value=14 Score=34.64 Aligned_cols=10 Identities=40% Similarity=0.684 Sum_probs=5.4
Q ss_pred HHHHHhhcCc
Q 020810 113 STMQQVMQNP 122 (321)
Q Consensus 113 ~~~~~~m~np 122 (321)
..++.+++||
T Consensus 341 aal~d~~~np 350 (377)
T KOG1308|consen 341 AALMDVSQNP 350 (377)
T ss_pred hhhhhcccCh
Confidence 4455555555
No 138
>PTZ00458 acyl CoA binding protein; Provisional
Probab=61.31 E-value=29 Score=25.99 Aligned_cols=71 Identities=13% Similarity=0.176 Sum_probs=51.4
Q ss_pred HHHHHHHHHhhhccCCccccCCCCChhhhHHHHHHhhc------CcHHHHHHHHHHhhhcCCChhhHHHHhcCCCCchhH
Q 020810 83 FNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQ------NPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKDQ 156 (321)
Q Consensus 83 ~~~maeq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~------np~~~~m~e~l~~~~~~~p~l~~m~~~l~dp~~~~~ 156 (321)
|...++.+.+.-.+ ...++.+..++|..++|.+. .|.+..+.++.. ++.+..+.+-.....
T Consensus 5 F~~A~~~v~~~~~~----~~~s~d~~L~lYalyKQAt~G~c~~~~P~~~d~~~raK---------w~AW~~l~~ms~~eA 71 (90)
T PTZ00458 5 FEECVSFINSLPKT----VNLSVEIKLDLYKYYKQSTVGNCNIKEPSMFKYQDRKK---------YEAWKSIENLNREDA 71 (90)
T ss_pred HHHHHHHHHhCCCC----CCCCHHHHHHHHHHHhhhccCCCCCCCCCcccHHHHHH---------HHHHHHcCCCCHHHH
Confidence 77777777542211 24567788899999999865 577777777775 778888888888887
Q ss_pred HHHHHHHhhc
Q 020810 157 IEERMAKIKE 166 (321)
Q Consensus 157 ~~~~~~~l~~ 166 (321)
....+..+.+
T Consensus 72 ~~~YI~l~~~ 81 (90)
T PTZ00458 72 KKRYVEIVTE 81 (90)
T ss_pred HHHHHHHHHH
Confidence 7777777665
No 139
>KOG0010 consensus Ubiquitin-like protein [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=57.56 E-value=24 Score=34.58 Aligned_cols=13 Identities=15% Similarity=0.230 Sum_probs=6.2
Q ss_pred HHHHHHHHHCCCC
Q 020810 308 KECVALLLENGAA 320 (321)
Q Consensus 308 ~~iv~~Ll~~GAd 320 (321)
..-++.|+..|.|
T Consensus 470 e~nlqAL~atgGd 482 (493)
T KOG0010|consen 470 EANLQALRATGGD 482 (493)
T ss_pred HHHHHHHHHhcCc
Confidence 3445555554444
No 140
>TIGR00601 rad23 UV excision repair protein Rad23. All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=50.67 E-value=16 Score=35.04 Aligned_cols=45 Identities=22% Similarity=0.443 Sum_probs=28.2
Q ss_pred HhhcCCchHHHHHHHHhcCchH-HHHHHHHHhhhccCCccccCCCCChhhhHHHHHHhhcCcH
Q 020810 62 SGLLNDPSIKELAEQIAKDPAF-NSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQNPQ 123 (321)
Q Consensus 62 ~~~~~~p~~~~~~~~~~~~p~~-~~maeq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~np~ 123 (321)
.-|.++|.|.+|=+.|.+||++ ..+-+|+++... +.++.+.+||.
T Consensus 249 ~~Lr~~pqf~~lR~~vq~NP~~L~~lLqql~~~nP-----------------~l~q~I~~n~e 294 (378)
T TIGR00601 249 EFLRNQPQFQQLRQVVQQNPQLLPPLLQQIGQENP-----------------QLLQQISQHPE 294 (378)
T ss_pred HHhhcCHHHHHHHHHHHHCHHHHHHHHHHHHhhCH-----------------HHHHHHHHCHH
Confidence 4466777777777667777753 455666655543 45666677773
No 141
>KOG0817 consensus Acyl-CoA-binding protein [Lipid transport and metabolism]
Probab=50.60 E-value=65 Score=26.32 Aligned_cols=71 Identities=18% Similarity=0.276 Sum_probs=50.8
Q ss_pred chHHHHHHHHHhhhccCCccccCCCCChhhhHHHHHHhhc------CcHHHHHHHHHHhhhcCCChhhHHHHhcCCCCch
Q 020810 81 PAFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQ------NPQFMTMAERLGNALMQDPSMSHMMESLTNPTKK 154 (321)
Q Consensus 81 p~~~~maeq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~------np~~~~m~e~l~~~~~~~p~l~~m~~~l~dp~~~ 154 (321)
..|...++.+++-... .+.-+..+||..++|... .|.+..+..+-. |+.++.+.+....
T Consensus 7 ~~Fe~a~~~~~~l~~~------p~~ee~L~lYglyKQAt~G~~~~~kPg~~d~~~k~K---------w~AW~~l~~~s~~ 71 (142)
T KOG0817|consen 7 AKFEAAAEAVKNLKKK------PSNEELLKLYGLYKQATVGDCNTPKPGFFDEEGKAK---------WQAWNSLGGMSKE 71 (142)
T ss_pred HHHHHHHHHHHhcccC------CCHHHHHHHHHHHHhhccCCCCCCCCchhhHHHHHH---------HHHHHhcCCCCHH
Confidence 3466667766654433 233466789999999765 888888888876 7888888888887
Q ss_pred hHHHHHHHHhhc
Q 020810 155 DQIEERMAKIKE 166 (321)
Q Consensus 155 ~~~~~~~~~l~~ 166 (321)
.....++..+.+
T Consensus 72 eA~~~Yv~~~~~ 83 (142)
T KOG0817|consen 72 EAMEAYVEKVEE 83 (142)
T ss_pred HHHHHHHHHHHH
Confidence 777777766554
No 142
>KOG0011 consensus Nucleotide excision repair factor NEF2, RAD23 component [Replication, recombination and repair]
Probab=50.26 E-value=57 Score=30.41 Aligned_cols=20 Identities=30% Similarity=0.662 Sum_probs=14.8
Q ss_pred hcCCchHHHHHHHHhcCchH
Q 020810 64 LLNDPSIKELAEQIAKDPAF 83 (321)
Q Consensus 64 ~~~~p~~~~~~~~~~~~p~~ 83 (321)
|+++|+|.+|-+-|.+||++
T Consensus 219 Lr~~~qf~~lR~~iqqNP~l 238 (340)
T KOG0011|consen 219 LRNQPQFQQLRQMIQQNPEL 238 (340)
T ss_pred hhccHHHHHHHHHHhhCHHH
Confidence 67778887777777788843
No 143
>PRK13676 hypothetical protein; Provisional
Probab=43.15 E-value=57 Score=25.25 Aligned_cols=86 Identities=10% Similarity=0.171 Sum_probs=49.5
Q ss_pred hHHHHHHHHHhhhccCCccccCCCCChhhhHHHHHHhhcCcHHHHHHHHHHhhhcCCChhhHHHHhcCCCCchhHHHHHH
Q 020810 82 AFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKDQIEERM 161 (321)
Q Consensus 82 ~~~~maeq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~np~~~~m~e~l~~~~~~~p~l~~m~~~l~dp~~~~~~~~~~ 161 (321)
++-..|..|.+.+..+.+. ..|......+..||....+...|...-.+= ....+.+..........+.+..
T Consensus 4 ni~d~A~eL~~aI~~s~ey--------~~~~~A~~~l~~d~~a~~li~~F~~~q~~~-~~~q~~g~~~~~e~~~~l~~l~ 74 (114)
T PRK13676 4 NIYDLANELERALRELPEY--------KALKEAKEAVKADEEAKKLFDEFRALQLEI-QQKQMTGQEITEEEQQKAQELG 74 (114)
T ss_pred hHHHHHHHHHHHHHcCHHH--------HHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHcCCCCCHHHHHHHHHHH
Confidence 3556677777777665443 345556666888999999999885311100 0000111111222345555666
Q ss_pred HHhhcCCChhHHHHH
Q 020810 162 AKIKEDPSLKPILDE 176 (321)
Q Consensus 162 ~~l~~~p~~~~~~~~ 176 (321)
..+..+|.+..++..
T Consensus 75 ~~i~~n~~i~~y~~A 89 (114)
T PRK13676 75 QKIQQNELLSKLMEA 89 (114)
T ss_pred HHHhcCHHHHHHHHH
Confidence 677778888777765
No 144
>TIGR00601 rad23 UV excision repair protein Rad23. All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=41.35 E-value=45 Score=31.96 Aligned_cols=43 Identities=23% Similarity=0.410 Sum_probs=30.9
Q ss_pred HHHhcCchHHHHHHHHHhhhccCCccccCCCCChhhhHHHHHHhhc-CcHHHHHHHHH
Q 020810 75 EQIAKDPAFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQ-NPQFMTMAERL 131 (321)
Q Consensus 75 ~~~~~~p~~~~maeq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~-np~~~~m~e~l 131 (321)
+.|.++|+|.+|-+.++. +|+-+...++++-+ ||++.+++...
T Consensus 249 ~~Lr~~pqf~~lR~~vq~--------------NP~~L~~lLqql~~~nP~l~q~I~~n 292 (378)
T TIGR00601 249 EFLRNQPQFQQLRQVVQQ--------------NPQLLPPLLQQIGQENPQLLQQISQH 292 (378)
T ss_pred HHhhcCHHHHHHHHHHHH--------------CHHHHHHHHHHHHhhCHHHHHHHHHC
Confidence 568899999999888765 44445555666544 99988877654
No 145
>PF07319 DnaI_N: Primosomal protein DnaI N-terminus; InterPro: IPR009928 This entry represents the N terminus (approximately 120 residues) of bacterial primosomal DnaI proteins, although one family member appears to be of viral origin. DnaI is one of the components of the Bacillus subtilis replication restart primosome, and is required for the DnaB75-dependent loading of the DnaC helicase [].; PDB: 2K7R_A.
Probab=40.35 E-value=46 Score=24.95 Aligned_cols=47 Identities=19% Similarity=0.410 Sum_probs=16.2
Q ss_pred HHHHHhhcCcHHHHHHHHHHhhhcCCChhhHHHHhcCCCCchhHHHH
Q 020810 113 STMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKDQIEE 159 (321)
Q Consensus 113 ~~~~~~m~np~~~~m~e~l~~~~~~~p~l~~m~~~l~dp~~~~~~~~ 159 (321)
..++++++++.+.+-.+.+-+.+..||..+.-+..-..-.....+..
T Consensus 6 ~~l~~~~~~~~~~~~~~~l~~~vl~dp~V~~Fl~~h~~eLt~~~i~r 52 (94)
T PF07319_consen 6 DSLKQLMKRRNFEERYEQLKQEVLSDPEVQAFLQEHQPELTQEMIER 52 (94)
T ss_dssp -S----S---HHHHHHHHHHHHHTT-HHHHHHHHHSTTT--HHHHHH
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHcCHHHHHHHHHhHHhcCHHHHHH
Confidence 34444555555555555554455555554444333333333333333
No 146
>PF07319 DnaI_N: Primosomal protein DnaI N-terminus; InterPro: IPR009928 This entry represents the N terminus (approximately 120 residues) of bacterial primosomal DnaI proteins, although one family member appears to be of viral origin. DnaI is one of the components of the Bacillus subtilis replication restart primosome, and is required for the DnaB75-dependent loading of the DnaC helicase [].; PDB: 2K7R_A.
Probab=39.98 E-value=21 Score=26.84 Aligned_cols=18 Identities=17% Similarity=0.375 Sum_probs=12.4
Q ss_pred HHHhhcCcHHHHHHHHHH
Q 020810 115 MQQVMQNPQFMTMAERLG 132 (321)
Q Consensus 115 ~~~~m~np~~~~m~e~l~ 132 (321)
++.++++|.+.++++...
T Consensus 25 ~~~vl~dp~V~~Fl~~h~ 42 (94)
T PF07319_consen 25 KQEVLSDPEVQAFLQEHQ 42 (94)
T ss_dssp HHHHTT-HHHHHHHHHST
T ss_pred HHHHHcCHHHHHHHHHhH
Confidence 445688888888888763
No 147
>KOG0011 consensus Nucleotide excision repair factor NEF2, RAD23 component [Replication, recombination and repair]
Probab=38.48 E-value=90 Score=29.14 Aligned_cols=41 Identities=15% Similarity=0.444 Sum_probs=23.7
Q ss_pred CCCCCCChhcHHHHHhhc-CCchHHH-HHHHHh-cCchHHHHHHH
Q 020810 48 VGGAAPNPFDFSAMSGLL-NDPSIKE-LAEQIA-KDPAFNSMAEQ 89 (321)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~-~~p~~~~-~~~~~~-~~p~~~~maeq 89 (321)
+.=+.++| .|+.|.+|. .||++.+ |.+||- .||+..+.-.+
T Consensus 216 l~fLr~~~-qf~~lR~~iqqNP~ll~~~Lqqlg~~nP~L~q~Iq~ 259 (340)
T KOG0011|consen 216 LEFLRNQP-QFQQLRQMIQQNPELLHPLLQQLGKQNPQLLQLIQE 259 (340)
T ss_pred hhhhhccH-HHHHHHHHHhhCHHHHHHHHHHHhhhCHHHHHHHHH
Confidence 44456777 455555544 7997765 555553 48855444333
No 148
>PF06133 DUF964: Protein of unknown function (DUF964); InterPro: IPR010368 This entry consists of several relatively short bacterial and archaeal hypothetical sequences. It also includes YlbF and YmcA proteins which are involved in the formation of biofilms []. YlbF regulates sporulation prior to stage II, positively controlling the competence regulator ComK at a post-transcriptional level. It may also modulate the translation, stability or activity of ComS and may work together with YmcA to regulate community development [].; PDB: 2IAZ_C 2OEE_A 2OEQ_D 2PIH_A.
Probab=33.96 E-value=1.1e+02 Score=23.06 Aligned_cols=61 Identities=23% Similarity=0.365 Sum_probs=33.4
Q ss_pred HhhcCCchHHHHHHHHhcCchHHHHHHHHHhhhccCCccccCCCCChhhhHHHHHHhhcCcHHHHHHHHH
Q 020810 62 SGLLNDPSIKELAEQIAKDPAFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQNPQFMTMAERL 131 (321)
Q Consensus 62 ~~~~~~p~~~~~~~~~~~~p~~~~maeq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~np~~~~m~e~l 131 (321)
..|.+||.+..+.+. |+..-++++.....+. .+ +.-....+......+++||.+..+...-
T Consensus 27 ~~l~~d~e~~~l~~~------f~~~q~~~~~~q~~g~-~~--~~e~~~~l~~~~~~l~~~p~v~~y~~ae 87 (108)
T PF06133_consen 27 EALEADPEAQKLIEE------FQKLQQELQNAQMYGK-EP--PKEEIEELQELQEELMQNPVVKEYLQAE 87 (108)
T ss_dssp HHHHCSHHHHHHHHH------HHHHHHHHHHHHHTTS-CH--HHHHHHHHHHHHHHHHTSHHHHHHHHHH
T ss_pred HHHHhCHHHHHHHHH------HHHHHHHHHHHHhhcc-CC--cHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 446677777776666 6666666654332211 10 0223335555556677788777666543
No 149
>PF07631 PSD4: Protein of unknown function (DUF1592); InterPro: IPR013042 A region of similarity shared by several Rhodopirellula baltica cytochrome-like proteins that are predicted to be secreted. These proteins also contain IPR011478 from INTERPRO, IPR013036 from INTERPRO, IPR013039 from INTERPRO and IPR013043 from INTERPRO.
Probab=33.27 E-value=2e+02 Score=22.88 Aligned_cols=46 Identities=17% Similarity=0.274 Sum_probs=32.4
Q ss_pred CCCChhcHHHHH--hhcCCchHHHHHHHHhcCchHHHHHHHHHhhhcc
Q 020810 51 AAPNPFDFSAMS--GLLNDPSIKELAEQIAKDPAFNSMAEQLQKTLHG 96 (321)
Q Consensus 51 ~~~~~~~~~~~~--~~~~~p~~~~~~~~~~~~p~~~~maeq~~~~~~~ 96 (321)
-+.+...+.+|. +|-+.-.+...++.|.++|.++.+..++-..--+
T Consensus 17 s~PD~~L~~aA~~g~L~~~~~l~~q~~RML~dpr~~~~~~~F~~qWL~ 64 (128)
T PF07631_consen 17 SPPDAELLDAAAAGELRTPEQLRAQAERMLADPRARRFVERFFRQWLD 64 (128)
T ss_pred CCCCHHHHHHHHhCCCCCHHHHHHHHHHHHcCccHHHHHHHHHHHHhC
Confidence 344555666664 3555556777889999999999888888776644
No 150
>cd00435 ACBP Acyl CoA binding protein (ACBP) binds thiol esters of long fatty acids and coenzyme A in a one-to-one binding mode with high specificity and affinity. Acyl-CoAs are important intermediates in fatty lipid synthesis and fatty acid degradation and play a role in regulation of intermediary metabolism and gene regulation. The suggested role of ACBP is to act as a intracellular acyl-CoA transporter and pool former. ACBPs are present in a large group of eukaryotic species and several tissue-specific isoforms have been detected.
Probab=31.00 E-value=1.8e+02 Score=21.31 Aligned_cols=69 Identities=23% Similarity=0.329 Sum_probs=44.2
Q ss_pred hHHHHHHHHHhhhccCCccccCCCCChhhhHHHHHHhhc------CcHHHHHHHHHHhhhcCCChhhHHHHhcCCCCchh
Q 020810 82 AFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQ------NPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKD 155 (321)
Q Consensus 82 ~~~~maeq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~------np~~~~m~e~l~~~~~~~p~l~~m~~~l~dp~~~~ 155 (321)
.|...++.+...- ...+.-+..++|...+|++. .|.+..+..+.. +..++.+.+.....
T Consensus 4 ~F~~A~~~v~~~~------~~~~~~~~L~lYalyKQAt~G~~~~~~P~~~d~~~~~K---------~~AW~~l~~ms~~e 68 (85)
T cd00435 4 EFEAAAEKVKKLK------TKPSNEEKLQLYSLYKQATVGDCNTERPGMFDLKGRAK---------WDAWNSLKGMSKED 68 (85)
T ss_pred HHHHHHHHHHhCC------CCcCHHHHHHHHHHHHHhccCCCCCCCCCcccHhhHHH---------HHHHHHcCCCCHHH
Confidence 3666666664322 23455567789999999875 566666666554 66777777777766
Q ss_pred HHHHHHHHhh
Q 020810 156 QIEERMAKIK 165 (321)
Q Consensus 156 ~~~~~~~~l~ 165 (321)
.....+..+.
T Consensus 69 A~~~YV~~~~ 78 (85)
T cd00435 69 AMKAYIAKVE 78 (85)
T ss_pred HHHHHHHHHH
Confidence 6666655543
No 151
>PF14181 YqfQ: YqfQ-like protein
Probab=30.04 E-value=1.3e+02 Score=25.11 Aligned_cols=27 Identities=19% Similarity=0.338 Sum_probs=15.8
Q ss_pred HHHHHHhhhcCCChhhHHHHhcCCCCc
Q 020810 127 MAERLGNALMQDPSMSHMMESLTNPTK 153 (321)
Q Consensus 127 m~e~l~~~~~~~p~l~~m~~~l~dp~~ 153 (321)
|.++.|=.+++=|.||.+++.+.+...
T Consensus 74 mIQQYGPLVrNLPam~kiyr~l~s~~~ 100 (161)
T PF14181_consen 74 MIQQYGPLVRNLPAMWKIYRGLKSSDD 100 (161)
T ss_pred HHHHHhHHHHhhHHHHHHHHccCCCCc
Confidence 344444444555777777777766655
No 152
>PF00887 ACBP: Acyl CoA binding protein; InterPro: IPR000582 Acyl-CoA-binding protein (ACBP) is a small (10 Kd) protein that binds medium- and long-chain acyl-CoA esters with very high affinity and may function as an intracellular carrier of acyl-CoA esters []. ACBP is also known as diazepam binding inhibitor (DBI) or endozepine (EP) because of its ability to displace diazepam from the benzodiazepine (BZD) recognition site located on the GABA type A receptor. It is therefore possible that this protein also acts as a neuropeptide to modulate the action of the GABA receptor []. ACBP is a highly conserved protein of about 90 residues that is found in all four eukaryotic kingdoms, Animalia, Plantae, Fungi and Protista, and in some eubacterial species []. Although ACBP occurs as a completely independent protein, intact ACB domains have been identified in a number of large, multifunctional proteins in a variety of eukaryotic species. These include large membrane-associated proteins with N-terminal ACB domains, multifunctional enzymes with both ACB and peroxisomal enoyl-CoA Delta(3), Delta(2)-enoyl-CoA isomerase domains, and proteins with both an ACB domain and ankyrin repeats (IPR002110 from INTERPRO) []. The ACB domain consists of four alpha-helices arranged in a bowl shape with a highly exposed acyl-CoA-binding site. The ligand is bound through specific interactions with residues on the protein, most notably several conserved positive charges that interact with the phosphate group on the adenosine-3'phosphate moiety, and the acyl chain is sandwiched between the hydrophobic surfaces of CoA and the protein []. Other proteins containing an ACB domain include: Endozepine-like peptide (ELP) (gene DBIL5) from mouse []. ELP is a testis-specific ACBP homologue that may be involved in the energy metabolism of the mature sperm. MA-DBI, a transmembrane protein of unknown function which has been found in mammals. MA-DBI contains a N-terminal ACB domain. DRS-1 [], a human protein of unknown function that contains a N-terminal ACB domain and a C-terminal enoyl-CoA isomerase/hydratase domain. ; GO: 0000062 fatty-acyl-CoA binding; PDB: 2CB8_A 2FJ9_A 2LBB_A 1ST7_A 3EPY_B 2FDQ_C 1NTI_A 1HB8_A 1ACA_A 1NVL_A ....
Probab=27.92 E-value=1.3e+02 Score=21.89 Aligned_cols=70 Identities=16% Similarity=0.294 Sum_probs=43.3
Q ss_pred hHHHHHHHHHhhhccCCccccCCCCChhhhHHHHHHhhc------CcHHHHHHHHHHhhhcCCChhhHHHHhcCCCCchh
Q 020810 82 AFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQ------NPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKD 155 (321)
Q Consensus 82 ~~~~maeq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~------np~~~~m~e~l~~~~~~~p~l~~m~~~l~dp~~~~ 155 (321)
.|...++.+.+.... ...+.-+...+|...+|.+. .|.+..+.++.. +..++.+..-....
T Consensus 4 ~F~~A~~~v~~~~~~----~~~~~~~~L~LYalyKQAt~Gd~~~~~P~~~d~~~~~K---------~~AW~~l~gms~~e 70 (87)
T PF00887_consen 4 EFEAAVEFVSNLPKK----SQLSNDDKLELYALYKQATHGDCDTPRPGFFDIEGRAK---------WDAWKALKGMSKEE 70 (87)
T ss_dssp HHHHHHHHHHHSSSC----STS-HHHHHHHHHHHHHHHTSS--S-CTTTTCHHHHHH---------HHHHHTTTTTHHHH
T ss_pred HHHHHHHHHHhcccc----CCCCHHHHHHHHHHHHHHHhCCCcCCCCcchhHHHHHH---------HHHHHHccCCCHHH
Confidence 366667666654332 45556677789999999876 566666666554 56666666665555
Q ss_pred HHHHHHHHh
Q 020810 156 QIEERMAKI 164 (321)
Q Consensus 156 ~~~~~~~~l 164 (321)
.....+..+
T Consensus 71 A~~~Yi~~v 79 (87)
T PF00887_consen 71 AMREYIELV 79 (87)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555555443
No 153
>PF03672 UPF0154: Uncharacterised protein family (UPF0154); InterPro: IPR005359 The proteins in this entry are functionally uncharacterised.
Probab=26.28 E-value=80 Score=22.06 Aligned_cols=10 Identities=20% Similarity=0.375 Sum_probs=5.4
Q ss_pred HHHHHHHHHh
Q 020810 83 FNSMAEQLQK 92 (321)
Q Consensus 83 ~~~maeq~~~ 92 (321)
++.|..|++.
T Consensus 37 ir~M~~QMG~ 46 (64)
T PF03672_consen 37 IRAMMMQMGR 46 (64)
T ss_pred HHHHHHHhCC
Confidence 5555555544
No 154
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=26.07 E-value=17 Score=36.45 Aligned_cols=53 Identities=23% Similarity=0.299 Sum_probs=38.6
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCC
Q 020810 236 TASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANV 288 (321)
Q Consensus 236 Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~ 288 (321)
++..+....+-.|++.+..++..|.-+.+|+|+++..|...+.+.++..-.+.
T Consensus 403 ~~~~~~ss~v~~lik~~~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~~~~ 455 (605)
T KOG3836|consen 403 AALNNSSSLVFTLIKKGAHPNDDDKFGFTPLHIPQISGDPRIIQLLLNCKVAI 455 (605)
T ss_pred hhhcCCccceeeeecccCccchhcccccccccccCCCCCHHHhhhhhhhhhhh
Confidence 44445555555667778888888888889999988888888888776654433
No 155
>KOG1595 consensus CCCH-type Zn-finger protein [General function prediction only]
Probab=26.04 E-value=11 Score=37.14 Aligned_cols=90 Identities=18% Similarity=0.046 Sum_probs=61.1
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCcHHHHHHH---CCCHHHHHHHHHcCCCCCCccCCCCcH---H
Q 020810 227 NEDESIVHHTASVGDAEGLKNALAAG-ADKDEEDSEGRTALHFACG---YGEVKCAQILLEAGANVDALDKNKNTA---L 299 (321)
Q Consensus 227 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~g-~~~~~~d~~g~TpLh~A~~---~g~~~~v~~Ll~~ga~~~~~d~~g~Tp---L 299 (321)
.+.+|++.+|+..|.++++.+++-.+ .+++-.-.+|.. |.+.. .+..+.+..|..+++..+..|..|.-+ |
T Consensus 56 ~~qR~~~~v~~~~Gs~~~~~~i~~~~~~e~~~~C~~~~~--~C~~~g~s~~~~e~~~hL~~~k~~~~~tda~g~~~~~v~ 133 (528)
T KOG1595|consen 56 LNQRRRRPVARRDGSFNYSPDIYCTKYDEVTGICPDGDE--HCAVLGRSVGDTERTYHLRYYKTLPCVTDARGNCVKNVL 133 (528)
T ss_pred hccccccchhhhcCccccccceeecchhhccccCCCCcc--cchhcccccCCcceeEeccccccccCccccCCCcccCcc
Confidence 45689999999999999999988654 445544444555 33332 355777788888888888888777754 5
Q ss_pred HHHHHCC---cHHHHHHHHHCC
Q 020810 300 HYAAGYG---RKECVALLLENG 318 (321)
Q Consensus 300 h~A~~~g---~~~iv~~Ll~~G 318 (321)
|.|..++ ....++.|++.+
T Consensus 134 ~~~~~~~~~~~r~~~~~l~e~~ 155 (528)
T KOG1595|consen 134 HCAFAHGPNDLRPPVEDLLELQ 155 (528)
T ss_pred cccccCCccccccHHHHHHhcc
Confidence 5555433 345666666654
No 156
>PRK13676 hypothetical protein; Provisional
Probab=26.00 E-value=2.6e+02 Score=21.53 Aligned_cols=61 Identities=16% Similarity=0.220 Sum_probs=38.3
Q ss_pred HhhcCCchHHHHHHHHhcCchHHHHHHHHHhhhccCCccccCCCCChhhhHHHHHHhhcCcHHHHHHHHH
Q 020810 62 SGLLNDPSIKELAEQIAKDPAFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQNPQFMTMAERL 131 (321)
Q Consensus 62 ~~~~~~p~~~~~~~~~~~~p~~~~maeq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~np~~~~m~e~l 131 (321)
..+..||....+-.. |+..-.+++.....+. ..++-+...+......++.||.+..+.+.-
T Consensus 30 ~~l~~d~~a~~li~~------F~~~q~~~~~~q~~g~---~~~~e~~~~l~~l~~~i~~n~~i~~y~~Ae 90 (114)
T PRK13676 30 EAVKADEEAKKLFDE------FRALQLEIQQKQMTGQ---EITEEEQQKAQELGQKIQQNELLSKLMEAE 90 (114)
T ss_pred HHHHcCHHHHHHHHH------HHHHHHHHHHHHHcCC---CCCHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 446677777776655 7777777765553221 122335556777777788888887777643
No 157
>PF06133 DUF964: Protein of unknown function (DUF964); InterPro: IPR010368 This entry consists of several relatively short bacterial and archaeal hypothetical sequences. It also includes YlbF and YmcA proteins which are involved in the formation of biofilms []. YlbF regulates sporulation prior to stage II, positively controlling the competence regulator ComK at a post-transcriptional level. It may also modulate the translation, stability or activity of ComS and may work together with YmcA to regulate community development [].; PDB: 2IAZ_C 2OEE_A 2OEQ_D 2PIH_A.
Probab=24.44 E-value=87 Score=23.69 Aligned_cols=64 Identities=13% Similarity=0.283 Sum_probs=33.0
Q ss_pred hhHHHHHHhhcCcHHHHHHHHHHhhhcCCChhhH--HHHhcCCCCchhHHHHHHHHhhcCCChhHHHHH
Q 020810 110 QYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSH--MMESLTNPTKKDQIEERMAKIKEDPSLKPILDE 176 (321)
Q Consensus 110 ~~~~~~~~~m~np~~~~m~e~l~~~~~~~p~l~~--m~~~l~dp~~~~~~~~~~~~l~~~p~~~~~~~~ 176 (321)
.|...-+.+..||....+...|...-. .+.. +.+..........+.+....+..+|.+..++..
T Consensus 21 ~~~~a~~~l~~d~e~~~l~~~f~~~q~---~~~~~q~~g~~~~~e~~~~l~~~~~~l~~~p~v~~y~~a 86 (108)
T PF06133_consen 21 RYKAAEEALEADPEAQKLIEEFQKLQQ---ELQNAQMYGKEPPKEEIEELQELQEELMQNPVVKEYLQA 86 (108)
T ss_dssp HHHHHHHHHHCSHHHHHHHHHHHHHHH---HHHHHHHTTSCHHHHHHHHHHHHHHHHHTSHHHHHHHHH
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHH---HHHHHHhhccCCcHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 344555567789999999888853111 0000 000000012234445555666667777766654
No 158
>PF15341 SLX9: Ribosome biogenesis protein SLX9
Probab=23.24 E-value=69 Score=25.20 Aligned_cols=25 Identities=24% Similarity=0.630 Sum_probs=16.7
Q ss_pred HHhhcCCchHHHHHHHHhcCchHHHHHHHHHhh
Q 020810 61 MSGLLNDPSIKELAEQIAKDPAFNSMAEQLQKT 93 (321)
Q Consensus 61 ~~~~~~~p~~~~~~~~~~~~p~~~~maeq~~~~ 93 (321)
++.+|+||+| .+|| |..+.+++...
T Consensus 96 f~~vL~~p~F-------~~nP-~aaI~~hi~~t 120 (121)
T PF15341_consen 96 FQQVLKHPSF-------QSNP-FAAIRQHISNT 120 (121)
T ss_pred HHHHHhCccc-------ccCH-HHHHHHHHHhc
Confidence 3567777765 3577 77788777653
No 159
>PRK00523 hypothetical protein; Provisional
Probab=21.61 E-value=1.1e+02 Score=21.83 Aligned_cols=9 Identities=22% Similarity=0.261 Sum_probs=4.1
Q ss_pred HHHHHHHHH
Q 020810 83 FNSMAEQLQ 91 (321)
Q Consensus 83 ~~~maeq~~ 91 (321)
++.|..|.+
T Consensus 45 ir~M~~QMG 53 (72)
T PRK00523 45 IRAMYMQMG 53 (72)
T ss_pred HHHHHHHhC
Confidence 444444443
Done!