Query 020810
Match_columns 321
No_of_seqs 446 out of 2116
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 08:31:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020810.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020810hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.9 1.2E-24 4E-29 183.3 16.1 125 180-321 38-162 (169)
2 1n0q_A 3ANK, 3 ankyrin repeats 99.9 9E-24 3.1E-28 159.3 12.8 93 228-320 1-93 (93)
3 4gpm_A Engineered protein OR26 99.9 4.5E-23 1.5E-27 173.6 15.3 105 216-321 25-129 (169)
4 1d9s_A Cyclin-dependent kinase 99.9 8.3E-23 2.8E-27 164.7 10.6 122 181-320 14-136 (136)
5 3v30_A DNA-binding protein rfx 99.9 1.1E-21 3.7E-26 163.9 16.3 99 222-320 29-127 (172)
6 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.6E-21 5.5E-26 153.5 16.1 123 181-320 4-126 (126)
7 2jab_A H10-2-G3; HER2, darpin, 99.9 1.3E-21 4.3E-26 157.7 15.3 121 181-318 16-136 (136)
8 3f6q_A Integrin-linked protein 99.9 1.9E-21 6.3E-26 163.8 16.5 103 219-321 29-131 (179)
9 3twr_A Tankyrase-2; ankyrin re 99.9 2.3E-21 7.9E-26 160.8 16.0 100 222-321 35-134 (165)
10 3v31_A Ankyrin repeat family A 99.9 2.5E-21 8.4E-26 160.9 16.1 124 181-321 5-128 (167)
11 3c5r_A BARD-1, BRCA1-associate 99.9 8.4E-22 2.9E-26 158.7 12.7 98 224-321 5-102 (137)
12 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.9E-21 6.5E-26 160.5 14.6 123 180-320 39-162 (162)
13 1bi7_B P16INK4A, MTS1, multipl 99.9 4.7E-22 1.6E-26 164.0 10.3 124 180-321 13-137 (156)
14 1awc_B Protein (GA binding pro 99.9 4E-21 1.4E-25 157.6 15.7 97 225-321 30-126 (153)
15 2y1l_E Darpin-8.4; hydrolase-i 99.9 5.4E-21 1.8E-25 159.6 16.4 96 225-320 43-138 (169)
16 2rfm_A Putative ankyrin repeat 99.9 4.1E-21 1.4E-25 163.3 15.0 94 224-317 96-189 (192)
17 3aaa_C Myotrophin, protein V-1 99.9 2.2E-21 7.6E-26 153.4 12.2 96 226-321 4-99 (123)
18 2l6b_A NR1C; ankyrin, consensu 99.9 5.1E-22 1.7E-26 155.1 8.2 98 224-321 4-101 (115)
19 1d9s_A Cyclin-dependent kinase 99.9 8.8E-22 3E-26 158.6 9.3 100 221-321 4-104 (136)
20 4b93_B Ankyrin repeat domain-c 99.9 7.4E-21 2.5E-25 171.5 15.3 125 180-321 87-211 (269)
21 3v30_A DNA-binding protein rfx 99.9 5.3E-21 1.8E-25 159.7 12.8 124 180-320 37-160 (172)
22 3twr_A Tankyrase-2; ankyrin re 99.8 5.4E-21 1.8E-25 158.5 11.4 122 180-319 43-164 (165)
23 2y1l_E Darpin-8.4; hydrolase-i 99.8 3.1E-20 1E-24 155.0 16.1 122 180-318 48-169 (169)
24 1oy3_D Transcription factor in 99.8 2E-20 6.9E-25 167.4 15.9 100 222-321 151-251 (282)
25 1ihb_A P18-INK4C(INK6), cyclin 99.8 1.5E-20 5.1E-25 155.0 13.3 121 182-320 8-128 (162)
26 1yyh_A HN1;, notch 1, ankyrin 99.8 2.4E-20 8.2E-25 165.7 14.5 94 223-316 151-244 (253)
27 2f8y_A Notch homolog 1, transl 99.8 5.7E-20 1.9E-24 159.3 16.4 107 213-320 110-216 (223)
28 4b93_B Ankyrin repeat domain-c 99.8 1.4E-20 4.8E-25 169.7 13.0 111 210-321 68-178 (269)
29 2jab_A H10-2-G3; HER2, darpin, 99.8 1.1E-20 3.6E-25 152.3 10.9 96 226-321 11-106 (136)
30 1bd8_A P19INK4D CDK4/6 inhibit 99.8 2.3E-20 7.9E-25 153.1 13.0 104 212-317 52-155 (156)
31 3f6q_A Integrin-linked protein 99.8 1.6E-20 5.4E-25 158.1 12.2 125 180-321 40-164 (179)
32 2rfm_A Putative ankyrin repeat 99.8 4.1E-20 1.4E-24 157.1 14.8 125 180-321 36-160 (192)
33 1awc_B Protein (GA binding pro 99.8 7.9E-20 2.7E-24 149.9 15.3 119 179-314 34-152 (153)
34 3v31_A Ankyrin repeat family A 99.8 2.6E-20 8.9E-25 154.7 12.3 124 180-320 37-160 (167)
35 2rfa_A Transient receptor pote 99.8 6.3E-20 2.2E-24 160.1 15.0 126 180-321 4-147 (232)
36 1dcq_A PYK2-associated protein 99.8 1.7E-20 5.8E-25 170.1 11.7 98 223-320 163-263 (278)
37 1bd8_A P19INK4D CDK4/6 inhibit 99.8 6.8E-20 2.3E-24 150.3 14.2 122 182-321 5-126 (156)
38 3aji_A 26S proteasome non-ATPa 99.8 1.1E-19 3.9E-24 158.3 16.3 125 180-321 74-198 (231)
39 3aji_A 26S proteasome non-ATPa 99.8 7.7E-20 2.6E-24 159.3 15.0 100 222-321 66-165 (231)
40 2dzn_A Probable 26S proteasome 99.8 1.2E-19 4.2E-24 157.5 15.8 126 180-321 73-201 (228)
41 2zgd_A 3 repeat synthetic anky 99.8 3.6E-20 1.2E-24 144.1 11.1 94 221-314 16-109 (110)
42 2rfa_A Transient receptor pote 99.8 1.4E-19 4.9E-24 157.9 16.2 131 179-321 37-184 (232)
43 4hbd_A KN motif and ankyrin re 99.8 4E-20 1.4E-24 167.0 13.0 138 180-318 112-273 (276)
44 1ycs_B 53BP2, P53BP2; ankyrin 99.8 2.2E-20 7.5E-25 164.9 10.9 97 223-319 64-163 (239)
45 1ikn_D Protein (I-kappa-B-alph 99.8 4.1E-20 1.4E-24 162.1 12.6 130 180-320 79-209 (236)
46 2f8y_A Notch homolog 1, transl 99.8 1.8E-19 6.2E-24 156.1 16.4 127 179-321 58-184 (223)
47 2vge_A RELA-associated inhibit 99.8 1.6E-20 5.4E-25 165.3 9.7 122 183-321 25-149 (229)
48 1oy3_D Transcription factor in 99.8 9.7E-20 3.3E-24 162.9 15.0 107 214-321 64-218 (282)
49 1n0r_A 4ANK, 4 ankyrin repeats 99.8 7.7E-20 2.6E-24 143.7 12.4 94 228-321 1-94 (126)
50 3b7b_A Euchromatic histone-lys 99.8 1.8E-19 6.1E-24 157.6 16.0 125 181-321 79-203 (237)
51 3hra_A Ankyrin repeat family p 99.8 1.6E-19 5.5E-24 153.9 14.8 123 180-318 73-201 (201)
52 3utm_A Tankyrase-1; tankyrase, 99.8 1.1E-19 3.6E-24 167.3 14.6 100 222-321 51-150 (351)
53 1k1a_A B-cell lymphoma 3-encod 99.8 3E-19 1E-23 156.2 16.6 129 180-321 80-209 (241)
54 2dzn_A Probable 26S proteasome 99.8 3E-19 1E-23 155.0 16.5 128 180-321 37-167 (228)
55 3ehr_A Osteoclast-stimulating 99.8 2.8E-20 9.7E-25 161.9 9.7 97 225-321 69-166 (222)
56 2vge_A RELA-associated inhibit 99.8 6.9E-20 2.3E-24 161.2 12.1 99 223-321 15-113 (229)
57 3lvq_E ARF-GAP with SH3 domain 99.8 1.5E-19 5.1E-24 176.6 15.3 96 226-321 168-266 (497)
58 2pnn_A Transient receptor pote 99.8 7.7E-20 2.6E-24 164.0 11.7 137 179-319 101-257 (273)
59 1s70_B 130 kDa myosin-binding 99.8 3E-19 1E-23 161.5 15.7 125 180-321 74-258 (299)
60 1ikn_D Protein (I-kappa-B-alph 99.8 2E-19 6.7E-24 157.7 13.9 125 180-321 46-177 (236)
61 3hra_A Ankyrin repeat family p 99.8 4.1E-19 1.4E-23 151.4 15.5 109 212-321 56-171 (201)
62 3jxi_A Vanilloid receptor-rela 99.8 5.6E-20 1.9E-24 163.4 10.2 138 180-320 94-250 (260)
63 1bi7_B P16INK4A, MTS1, multipl 99.8 3.1E-20 1E-24 153.1 7.8 97 224-321 7-104 (156)
64 3deo_A Signal recognition part 99.8 3.8E-20 1.3E-24 156.7 8.5 95 226-321 41-136 (183)
65 1ycs_B 53BP2, P53BP2; ankyrin 99.8 4.7E-20 1.6E-24 162.8 9.4 96 226-321 34-129 (239)
66 3ljn_A Hypothetical protein; a 99.8 1.2E-19 4.1E-24 169.3 12.7 124 180-320 139-269 (364)
67 2b0o_E UPLC1; arfgap, structur 99.8 2.1E-19 7.3E-24 164.7 14.0 96 225-320 186-284 (301)
68 3c5r_A BARD-1, BRCA1-associate 99.8 3E-20 1E-24 149.5 7.3 123 180-319 11-133 (137)
69 2etb_A Transient receptor pote 99.8 8.1E-20 2.8E-24 162.1 10.8 125 179-320 90-246 (256)
70 1yyh_A HN1;, notch 1, ankyrin 99.8 3E-19 1E-23 158.6 14.4 141 181-321 59-216 (253)
71 3ehr_A Osteoclast-stimulating 99.8 5.9E-20 2E-24 159.9 9.5 124 180-320 74-198 (222)
72 2xai_A ASB-9, ankyrin repeat a 99.8 5.4E-19 1.9E-23 157.7 15.9 99 222-321 62-160 (261)
73 2etb_A Transient receptor pote 99.8 1.2E-19 4E-24 161.1 11.4 136 180-321 44-207 (256)
74 4g8k_A 2-5A-dependent ribonucl 99.8 4.9E-19 1.7E-23 163.5 15.5 135 181-321 170-327 (337)
75 1wdy_A 2-5A-dependent ribonucl 99.8 5.7E-19 1.9E-23 157.5 15.2 124 182-321 8-131 (285)
76 3aaa_C Myotrophin, protein V-1 99.8 1.5E-19 5.2E-24 142.8 10.0 108 182-306 10-117 (123)
77 1wdy_A 2-5A-dependent ribonucl 99.8 8.7E-19 3E-23 156.3 16.2 125 181-321 150-279 (285)
78 3jxi_A Vanilloid receptor-rela 99.8 1.5E-19 5.3E-24 160.5 11.2 136 179-320 46-210 (260)
79 2pnn_A Transient receptor pote 99.8 2.2E-19 7.7E-24 160.9 12.0 135 180-320 55-218 (273)
80 2xai_A ASB-9, ankyrin repeat a 99.8 8.3E-19 2.8E-23 156.6 15.4 123 180-321 70-192 (261)
81 3t8k_A Uncharacterized protein 99.8 7.2E-20 2.5E-24 156.2 8.1 107 210-317 57-176 (186)
82 3ljn_A Hypothetical protein; a 99.8 3.4E-19 1.2E-23 166.3 13.2 140 181-321 86-237 (364)
83 1n11_A Ankyrin; clathrin, BAND 99.8 8E-19 2.7E-23 167.6 15.6 107 214-321 264-370 (437)
84 3kea_A K1L; tropism, ANK repea 99.8 4.2E-19 1.4E-23 160.9 12.9 122 180-320 32-154 (285)
85 1s70_B 130 kDa myosin-binding 99.8 1.2E-18 4.2E-23 157.5 15.7 123 182-321 43-225 (299)
86 3ui2_A Signal recognition part 99.8 2E-19 7E-24 159.5 10.2 95 226-321 42-137 (244)
87 1k1a_A B-cell lymphoma 3-encod 99.8 1.6E-18 5.6E-23 151.5 15.8 108 213-321 64-176 (241)
88 3b7b_A Euchromatic histone-lys 99.8 2E-18 6.8E-23 150.9 16.1 100 222-321 70-170 (237)
89 3t8k_A Uncharacterized protein 99.8 1.4E-19 4.8E-24 154.5 7.9 95 227-321 36-147 (186)
90 3deo_A Signal recognition part 99.8 1.4E-18 4.9E-23 146.9 13.6 119 181-317 46-181 (183)
91 3d9h_A CDNA FLJ77766, highly s 99.8 9E-19 3.1E-23 158.7 13.0 98 223-320 53-150 (285)
92 3d9h_A CDNA FLJ77766, highly s 99.8 2.2E-18 7.7E-23 156.0 15.6 99 222-321 118-216 (285)
93 3ui2_A Signal recognition part 99.8 7.6E-19 2.6E-23 155.8 11.5 120 181-318 47-183 (244)
94 3kea_A K1L; tropism, ANK repea 99.8 4.3E-19 1.5E-23 160.8 9.4 98 222-321 24-121 (285)
95 2fo1_E LIN-12 protein; beta-ba 99.8 1.1E-18 3.8E-23 164.1 12.2 97 224-320 274-371 (373)
96 4hbd_A KN motif and ankyrin re 99.8 6E-19 2.1E-23 159.2 9.9 113 209-321 125-243 (276)
97 3jue_A Arfgap with coiled-coil 99.8 2.7E-18 9.4E-23 161.6 13.6 107 212-319 217-325 (368)
98 3utm_A Tankyrase-1; tankyrase, 99.8 6.5E-18 2.2E-22 155.3 15.6 98 224-321 206-306 (351)
99 1n11_A Ankyrin; clathrin, BAND 99.8 4.5E-18 1.5E-22 162.3 14.8 141 180-321 15-172 (437)
100 1sw6_A Regulatory protein SWI6 99.8 1.1E-18 3.8E-23 161.3 9.4 127 178-321 130-309 (327)
101 2fo1_E LIN-12 protein; beta-ba 99.7 4.8E-18 1.7E-22 159.7 12.3 142 180-321 167-339 (373)
102 3eu9_A Huntingtin-interacting 99.7 2.3E-17 7.9E-22 143.5 15.5 107 215-321 62-169 (240)
103 3eu9_A Huntingtin-interacting 99.7 4.5E-17 1.5E-21 141.6 14.7 109 212-321 93-203 (240)
104 1sw6_A Regulatory protein SWI6 99.7 4.1E-18 1.4E-22 157.5 7.0 104 214-317 116-227 (327)
105 3jue_A Arfgap with coiled-coil 99.7 3.5E-17 1.2E-21 154.0 11.4 97 225-321 195-294 (368)
106 4g8k_A 2-5A-dependent ribonucl 99.7 1.8E-16 6.2E-21 146.2 14.9 124 182-321 28-151 (337)
107 2b0o_E UPLC1; arfgap, structur 99.7 2.5E-16 8.4E-21 144.2 11.7 93 229-321 151-252 (301)
108 3lvq_E ARF-GAP with SH3 domain 99.7 2E-16 6.8E-21 154.5 11.6 92 230-321 133-233 (497)
109 1dcq_A PYK2-associated protein 99.7 4.9E-16 1.7E-20 140.6 12.4 92 230-321 131-231 (278)
110 2aja_A Ankyrin repeat family p 99.6 1.9E-17 6.6E-22 156.3 -0.3 124 181-319 94-223 (376)
111 1n0q_A 3ANK, 3 ankyrin repeats 99.6 5.1E-15 1.7E-19 110.9 11.9 91 180-287 3-93 (93)
112 2aja_A Ankyrin repeat family p 99.6 4.4E-16 1.5E-20 147.0 4.9 95 226-321 89-189 (376)
113 2l6b_A NR1C; ankyrin, consensu 99.6 2.3E-15 7.9E-20 117.0 7.5 102 181-299 11-112 (115)
114 2zgd_A 3 repeat synthetic anky 99.4 3.2E-13 1.1E-17 104.4 6.9 67 255-321 17-83 (110)
115 2llw_A Heat shock protein STI1 97.6 3.1E-05 1.1E-09 54.5 3.3 53 58-132 10-62 (71)
116 2lnm_A Protein TIC 40, chlorop 97.5 9E-05 3.1E-09 50.8 4.0 20 113-132 35-54 (62)
117 2llw_A Heat shock protein STI1 97.1 5.9E-05 2E-09 53.1 -0.6 45 45-92 19-63 (71)
118 2lnm_A Protein TIC 40, chlorop 97.0 0.00014 4.9E-09 49.8 0.9 47 47-96 13-59 (62)
119 2llv_A Heat shock protein STI1 96.7 0.00057 1.9E-08 48.1 1.7 47 63-131 18-65 (71)
120 2qsf_X RAD23, UV excision repa 94.2 0.033 1.1E-06 45.8 3.5 42 48-89 25-69 (171)
121 2qsf_X RAD23, UV excision repa 90.3 0.2 6.8E-06 41.1 3.4 33 61-93 25-59 (171)
122 2llv_A Heat shock protein STI1 86.5 0.081 2.8E-06 36.9 -1.1 21 64-84 28-48 (71)
123 2lbb_A Acyl COA binding protei 72.6 6.8 0.00023 28.7 5.2 76 77-166 8-89 (96)
124 2f4m_B UV excision repair prot 70.0 7.4 0.00025 26.0 4.5 20 63-82 6-25 (61)
125 1pve_A HHR23B, UV excision rep 68.9 4.5 0.00016 27.9 3.4 20 63-82 8-27 (72)
126 3fp5_A Acyl-COA binding protei 68.5 5.7 0.00019 29.7 4.1 75 80-165 5-85 (106)
127 2cqu_A Peroxisomal D3,D2-enoyl 64.8 3.7 0.00013 31.2 2.5 70 82-166 19-94 (116)
128 2cop_A Acyl-coenzyme A binding 59.7 14 0.00048 27.6 4.9 74 82-170 11-91 (109)
129 2cb8_A Acyl-COA-binding protei 59.2 10 0.00036 27.1 3.9 70 81-165 4-79 (87)
130 1hbk_A ACBP, acyl-COA binding 57.6 26 0.0009 25.0 5.9 72 82-166 5-82 (89)
131 1pve_A HHR23B, UV excision rep 57.6 8.8 0.0003 26.5 3.1 41 48-89 6-49 (72)
132 3pk1_B Apoptosis regulator BAX 56.9 5 0.00017 23.1 1.4 23 64-92 3-25 (34)
133 3flv_A Acyl-COA-binding domain 53.7 23 0.00078 26.9 5.2 72 82-164 27-104 (119)
134 3epy_A Acyl-COA-binding domain 50.8 26 0.0009 25.1 4.9 69 82-165 7-81 (89)
135 2wh5_A Acyl-COA-binding domain 50.7 28 0.00097 25.8 5.2 74 81-165 10-89 (106)
136 1st7_A ACBP, acyl-COA-binding 42.8 24 0.00082 25.0 3.6 69 82-165 4-78 (86)
137 2oee_A UPF0342 protein YHEA; M 38.5 52 0.0018 24.4 5.2 85 83-176 5-89 (117)
138 2iaz_A Hypothetical protein SP 36.8 43 0.0015 24.6 4.4 85 83-176 5-89 (113)
139 3zr8_X AVR3A11; protein bindin 31.7 27 0.00093 23.2 2.1 21 69-89 7-27 (65)
140 1gp8_A Protein (scaffolding pr 28.1 41 0.0014 20.0 2.2 17 233-249 17-33 (40)
141 2pih_A Protein YMCA; regulate 25.3 37 0.0013 26.7 2.4 85 83-176 9-94 (151)
142 2k7r_A Primosomal protein DNAI 25.0 54 0.0018 24.0 3.1 9 118-126 28-36 (106)
143 4g3o_A E3 ubiquitin-protein li 24.7 71 0.0024 20.9 3.2 34 75-117 9-42 (58)
144 2oeq_A Protein of unknown func 24.6 53 0.0018 24.7 3.0 84 84-176 9-92 (122)
145 3zrh_A Ubiquitin thioesterase 24.1 1.8E+02 0.0063 26.9 6.9 47 237-283 30-90 (454)
146 1oqy_A HHR23A, UV excision rep 23.5 44 0.0015 30.6 2.8 19 64-82 240-258 (368)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.92 E-value=1.2e-24 Score=183.31 Aligned_cols=125 Identities=31% Similarity=0.450 Sum_probs=108.7
Q ss_pred CChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 020810 180 GGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEED 259 (321)
Q Consensus 180 g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d 259 (321)
.++...+...+..++++.+.+ .+.+ ++.+|..|+||||+||..|+.++|++|+++|++++.+|
T Consensus 38 ~t~l~~a~~~~~~~~~~~ll~----------------~gad-~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d 100 (169)
T 4gpm_A 38 RTPLHHAAENGHKEVVKLLIS----------------KGAD-VNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKD 100 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHH----------------TTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CCHHHHHHHcCCHHHHHHHHh----------------cccc-hhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCC
Confidence 356677777777777766643 2333 46678899999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 260 SEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 260 ~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.++|++|+++||+|
T Consensus 101 ~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~i 162 (169)
T 4gpm_A 101 SDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWL 162 (169)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC----
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999986
No 2
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.91 E-value=9e-24 Score=159.30 Aligned_cols=93 Identities=46% Similarity=0.621 Sum_probs=89.9
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCc
Q 020810 228 EDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGR 307 (321)
Q Consensus 228 ~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~ 307 (321)
+|+||||+||..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCC
Q 020810 308 KECVALLLENGAA 320 (321)
Q Consensus 308 ~~iv~~Ll~~GAd 320 (321)
.+++++|+++||+
T Consensus 81 ~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 81 LEVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCC
Confidence 9999999999986
No 3
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.90 E-value=4.5e-23 Score=173.61 Aligned_cols=105 Identities=39% Similarity=0.597 Sum_probs=99.6
Q ss_pred hcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCC
Q 020810 216 NAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNK 295 (321)
Q Consensus 216 ~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g 295 (321)
..|++ ++.+|..|+||||+|+..++.+++++|++.|++++.+|..|+||||+|+..|+.++|++|+++|++++.+|..|
T Consensus 25 ~~Gad-vn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G 103 (169)
T 4gpm_A 25 ENGAD-VNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDG 103 (169)
T ss_dssp HTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCC
Confidence 44444 46778999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 296 NTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 296 ~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
+||||+|+..|+.++|++|+++||++
T Consensus 104 ~TpLh~A~~~g~~~~v~~Ll~~gad~ 129 (169)
T 4gpm_A 104 RTPLHHAAENGHKEVVKLLISKGADV 129 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 99999999999999999999999986
No 4
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.88 E-value=8.3e-23 Score=164.72 Aligned_cols=122 Identities=20% Similarity=0.202 Sum_probs=109.7
Q ss_pred ChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 020810 181 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDS 260 (321)
Q Consensus 181 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~ 260 (321)
++.+.+...++.++++.|.+. +.+ ++..+..|+||||+|+. |+.+++++|+++|++++.+|.
T Consensus 14 t~L~~A~~~~~~~~v~~Ll~~----------------g~~-~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~ 75 (136)
T 1d9s_A 14 AGLATAAARGQVETVRQLLEA----------------GAD-PNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADP 75 (136)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT----------------TCC-TTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBT
T ss_pred cHHHHHHHcCCHHHHHHHHHc----------------CCC-cCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCC
Confidence 566667777777777777543 222 45668899999999999 999999999999999999999
Q ss_pred C-CCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCC
Q 020810 261 E-GRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAA 320 (321)
Q Consensus 261 ~-g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAd 320 (321)
. |+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|||
T Consensus 76 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 76 ATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp TTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9 99999999999999999999999999999999999999999999999999999999997
No 5
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.88 E-value=1.1e-21 Score=163.86 Aligned_cols=99 Identities=26% Similarity=0.328 Sum_probs=53.9
Q ss_pred hhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHH
Q 020810 222 AEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHY 301 (321)
Q Consensus 222 ~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~ 301 (321)
.+..+..|+||||+|+..|+.++|++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+
T Consensus 29 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 108 (172)
T 3v30_A 29 VNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLY 108 (172)
T ss_dssp GGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHH
T ss_pred ccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 34444555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred HHHCCcHHHHHHHHHCCCC
Q 020810 302 AAGYGRKECVALLLENGAA 320 (321)
Q Consensus 302 A~~~g~~~iv~~Ll~~GAd 320 (321)
|+..|+.++|++|+++|++
T Consensus 109 A~~~~~~~~v~~Ll~~ga~ 127 (172)
T 3v30_A 109 AVRGNHVKCVEALLARGAD 127 (172)
T ss_dssp HHHTTCHHHHHHHHHTTCC
T ss_pred HHHcCCHHHHHHHHHcCCC
Confidence 5555555555555555554
No 6
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.88 E-value=1.6e-21 Score=153.45 Aligned_cols=123 Identities=41% Similarity=0.539 Sum_probs=110.9
Q ss_pred ChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 020810 181 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDS 260 (321)
Q Consensus 181 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~ 260 (321)
++.+.+...++.+++++|.+. +.+ ++..+..|.||||+|+..|+.+++++|+++|++++.+|.
T Consensus 4 t~L~~A~~~~~~~~v~~Ll~~----------------~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 66 (126)
T 1n0r_A 4 TPLHLAARNGHLEVVKLLLEA----------------GAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDK 66 (126)
T ss_dssp CHHHHHHHHTCHHHHHHHHHH----------------TCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred cHHHHHHHcCcHHHHHHHHHc----------------CCC-CCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCC
Confidence 566677777888888877643 222 345678899999999999999999999999999999999
Q ss_pred CCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCC
Q 020810 261 EGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAA 320 (321)
Q Consensus 261 ~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAd 320 (321)
.|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|||
T Consensus 67 ~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 67 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred CCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999999999999999999997
No 7
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.88 E-value=1.3e-21 Score=157.73 Aligned_cols=121 Identities=26% Similarity=0.300 Sum_probs=106.7
Q ss_pred ChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 020810 181 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDS 260 (321)
Q Consensus 181 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~ 260 (321)
++.+.+...++.++++.|.+. +.+ ++..|..|+||||+||..|+.+++++|+++|++++..|.
T Consensus 16 t~l~~A~~~g~~~~v~~Ll~~----------------g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~ 78 (136)
T 2jab_A 16 KKLLEAARAGQDDEVRILMAN----------------GAD-VNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDA 78 (136)
T ss_dssp HHHHHHHHHTCHHHHHHHHHT----------------TCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHHhCCHHHHHHHHHc----------------CCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCC
Confidence 345566666777777776532 222 356688899999999999999999999999999999999
Q ss_pred CCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCC
Q 020810 261 EGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENG 318 (321)
Q Consensus 261 ~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~G 318 (321)
.|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 79 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 79 IGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999999999987
No 8
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.87 E-value=1.9e-21 Score=163.80 Aligned_cols=103 Identities=25% Similarity=0.372 Sum_probs=90.2
Q ss_pred CchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcH
Q 020810 219 ADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTA 298 (321)
Q Consensus 219 ~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~Tp 298 (321)
+...+..+..|+||||+||..|+.+++++|++.|++++..|..|+||||+|+..|+.+++++|+++|++++.+|..|+||
T Consensus 29 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~ 108 (179)
T 3f6q_A 29 ENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVP 108 (179)
T ss_dssp TSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred cccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCH
Confidence 33456677888899999999999999999999999999888899999999999999999999999999999999999999
Q ss_pred HHHHHHCCcHHHHHHHHHCCCCC
Q 020810 299 LHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 299 Lh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
||+|+..|+.+++++|+++|+++
T Consensus 109 L~~A~~~~~~~~v~~Ll~~ga~~ 131 (179)
T 3f6q_A 109 LHYACFWGQDQVAEDLVANGALV 131 (179)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCS
T ss_pred HHHHHHcCCHHHHHHHHHCCCCc
Confidence 99999999999999999988875
No 9
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.87 E-value=2.3e-21 Score=160.78 Aligned_cols=100 Identities=33% Similarity=0.479 Sum_probs=85.0
Q ss_pred hhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHH
Q 020810 222 AEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHY 301 (321)
Q Consensus 222 ~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~ 301 (321)
....+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+
T Consensus 35 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 114 (165)
T 3twr_A 35 CRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHE 114 (165)
T ss_dssp CCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred ccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHH
Confidence 34556678888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HHHCCcHHHHHHHHHCCCCC
Q 020810 302 AAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 302 A~~~g~~~iv~~Ll~~GAdv 321 (321)
|+..|+.+++++|+++|+++
T Consensus 115 A~~~~~~~~v~~Ll~~ga~~ 134 (165)
T 3twr_A 115 AAAKGKYEICKLLLQHGADP 134 (165)
T ss_dssp HHHTTCHHHHHHHHHTTCCT
T ss_pred HHHcCCHHHHHHHHHcCCCC
Confidence 88888888888888888874
No 10
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.87 E-value=2.5e-21 Score=160.92 Aligned_cols=124 Identities=25% Similarity=0.287 Sum_probs=75.1
Q ss_pred ChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 020810 181 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDS 260 (321)
Q Consensus 181 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~ 260 (321)
.+.+.+...++.++++.+.+. +. .++..+..|+||||+|+..|+.+++++|++.|++++..|.
T Consensus 5 t~L~~A~~~g~~~~v~~ll~~----------------~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 67 (167)
T 3v31_A 5 LSVHQLAAQGEMLYLATRIEQ----------------EN-VINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGK 67 (167)
T ss_dssp CCHHHHHHTTCHHHHHHHHHH----------------SS-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred chHHHHHHCCCHHHHHHHHHc----------------CC-CcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCC
Confidence 345555555666666665433 11 1344455566666666666666666666666666666666
Q ss_pred CCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 261 EGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 261 ~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
.|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+++
T Consensus 68 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 128 (167)
T 3v31_A 68 GRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADP 128 (167)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 6666666666666666666666666666666666666666666666666666666666653
No 11
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.87 E-value=8.4e-22 Score=158.70 Aligned_cols=98 Identities=32% Similarity=0.473 Sum_probs=94.8
Q ss_pred hcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHH
Q 020810 224 EVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAA 303 (321)
Q Consensus 224 ~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~ 303 (321)
.+|..|+||||+||..|+.+++++|++.|++++.+|..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 84 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAA 84 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HCCcHHHHHHHHHCCCCC
Q 020810 304 GYGRKECVALLLENGAAV 321 (321)
Q Consensus 304 ~~g~~~iv~~Ll~~GAdv 321 (321)
..|+.+++++|+++|+++
T Consensus 85 ~~~~~~~v~~Ll~~ga~~ 102 (137)
T 3c5r_A 85 KNGHVDIVKLLLSYGASR 102 (137)
T ss_dssp HTTCHHHHHHHHHTTCCT
T ss_pred HcCCHHHHHHHHHcCCCC
Confidence 999999999999999985
No 12
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.87 E-value=1.9e-21 Score=160.45 Aligned_cols=123 Identities=28% Similarity=0.416 Sum_probs=107.1
Q ss_pred CChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 020810 180 GGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEED 259 (321)
Q Consensus 180 g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d 259 (321)
.++.+++.. ++.++++.|.+. +.+ .+..+..|+||||+|+..|+.+++++|+++|++++.+|
T Consensus 39 ~t~L~~A~~-~~~~~v~~Ll~~----------------g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 100 (162)
T 1ihb_A 39 RTALQVMKL-GNPEIARRLLLR----------------GAN-PDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIED 100 (162)
T ss_dssp CCHHHHCCS-SCHHHHHHHHHT----------------TCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred ccHHHHHHc-CcHHHHHHHHHc----------------CCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 355666655 777777776542 222 35568889999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHCCCHHHHHHHHHcCCC-CCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCC
Q 020810 260 SEGRTALHFACGYGEVKCAQILLEAGAN-VDALDKNKNTALHYAAGYGRKECVALLLENGAA 320 (321)
Q Consensus 260 ~~g~TpLh~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAd 320 (321)
..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|||
T Consensus 101 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 101 NEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 9999999999999999999999999998 699999999999999999999999999999996
No 13
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.87 E-value=4.7e-22 Score=164.01 Aligned_cols=124 Identities=20% Similarity=0.192 Sum_probs=108.5
Q ss_pred CChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 020810 180 GGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEED 259 (321)
Q Consensus 180 g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d 259 (321)
.++.+.+...++.++++.|.+. +.+ ++..+..|+||||+|+ .|+.+++++|+++|++++.+|
T Consensus 13 ~t~L~~A~~~g~~~~v~~Ll~~----------------g~~-~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d 74 (156)
T 1bi7_B 13 ADWLATAAARGRVEEVRALLEA----------------GAN-PNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCAD 74 (156)
T ss_dssp TTHHHHHHHHTCHHHHHHHHTT----------------TCC-TTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCC
T ss_pred hHHHHHHHHcCCHHHHHHHHHc----------------CCC-CCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcC
Confidence 3567777777888888777532 222 4566889999999985 999999999999999999999
Q ss_pred CCCCc-HHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 260 SEGRT-ALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 260 ~~g~T-pLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
..|+| |||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+++
T Consensus 75 ~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~ 137 (156)
T 1bi7_B 75 PATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGT 137 (156)
T ss_dssp TTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC---
T ss_pred CCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCC
Confidence 99999 999999999999999999999999999999999999999999999999999999985
No 14
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.86 E-value=4e-21 Score=157.61 Aligned_cols=97 Identities=35% Similarity=0.448 Sum_probs=80.4
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHH
Q 020810 225 VGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAG 304 (321)
Q Consensus 225 ~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~ 304 (321)
.+..|.||||+|+..|+.+++++|++.|++++..|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 30 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 109 (153)
T 1awc_B 30 TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATE 109 (153)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 36678888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred CCcHHHHHHHHHCCCCC
Q 020810 305 YGRKECVALLLENGAAV 321 (321)
Q Consensus 305 ~g~~~iv~~Ll~~GAdv 321 (321)
.|+.+++++|+++|+++
T Consensus 110 ~~~~~~v~~Ll~~ga~~ 126 (153)
T 1awc_B 110 HNHQEVVELLIKYGADV 126 (153)
T ss_dssp TTCHHHHHHHHHTTCCT
T ss_pred cCCHHHHHHHHHcCCCc
Confidence 88888888888888764
No 15
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.86 E-value=5.4e-21 Score=159.60 Aligned_cols=96 Identities=35% Similarity=0.474 Sum_probs=48.9
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHH
Q 020810 225 VGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAG 304 (321)
Q Consensus 225 ~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~ 304 (321)
.+..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 43 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~ 122 (169)
T 2y1l_E 43 EDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAM 122 (169)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 34444555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred CCcHHHHHHHHHCCCC
Q 020810 305 YGRKECVALLLENGAA 320 (321)
Q Consensus 305 ~g~~~iv~~Ll~~GAd 320 (321)
.|+.+++++|+++|++
T Consensus 123 ~~~~~~v~~Ll~~g~~ 138 (169)
T 2y1l_E 123 FGHLEIVEVLLKNGAD 138 (169)
T ss_dssp TTCHHHHHHHHHTTCC
T ss_pred cCCHHHHHHHHHcCCC
Confidence 5555555555555444
No 16
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.86 E-value=4.1e-21 Score=163.32 Aligned_cols=94 Identities=28% Similarity=0.318 Sum_probs=49.7
Q ss_pred hcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHH
Q 020810 224 EVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAA 303 (321)
Q Consensus 224 ~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~ 303 (321)
..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 96 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 175 (192)
T 2rfm_A 96 TKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASAR 175 (192)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHH
T ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 33444555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred HCCcHHHHHHHHHC
Q 020810 304 GYGRKECVALLLEN 317 (321)
Q Consensus 304 ~~g~~~iv~~Ll~~ 317 (321)
..|+.+++++|+++
T Consensus 176 ~~~~~~~v~~Ll~~ 189 (192)
T 2rfm_A 176 IFGRQEVIKIFTEV 189 (192)
T ss_dssp HTTCHHHHHHHHHH
T ss_pred HhCcHHHHHHHHhc
Confidence 55555555555543
No 17
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.86 E-value=2.2e-21 Score=153.42 Aligned_cols=96 Identities=32% Similarity=0.467 Sum_probs=88.2
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHC
Q 020810 226 GNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGY 305 (321)
Q Consensus 226 d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~ 305 (321)
+..|.|+||+|+..|+.+++++|++.|++++.+|..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+..
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHCCCCC
Q 020810 306 GRKECVALLLENGAAV 321 (321)
Q Consensus 306 g~~~iv~~Ll~~GAdv 321 (321)
|+.++|++|+++|+++
T Consensus 84 ~~~~~v~~Ll~~ga~~ 99 (123)
T 3aaa_C 84 GHVSCVKLLLSKGADK 99 (123)
T ss_dssp TCHHHHHHHHHTTCCT
T ss_pred CCHHHHHHHHHcCCCC
Confidence 9999999999999875
No 18
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.86 E-value=5.1e-22 Score=155.15 Aligned_cols=98 Identities=36% Similarity=0.505 Sum_probs=94.9
Q ss_pred hcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHH
Q 020810 224 EVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAA 303 (321)
Q Consensus 224 ~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~ 303 (321)
.+|..|+|+||+||..|+.+++++|++.|++++..|..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 35788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HCCcHHHHHHHHHCCCCC
Q 020810 304 GYGRKECVALLLENGAAV 321 (321)
Q Consensus 304 ~~g~~~iv~~Ll~~GAdv 321 (321)
..|+.+++++|+++||++
T Consensus 84 ~~~~~~~~~~Ll~~ga~~ 101 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKGADV 101 (115)
T ss_dssp TTTCHHHHHHHHTTSSSH
T ss_pred HCCCHHHHHHHHHcCCCC
Confidence 999999999999999985
No 19
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.86 E-value=8.8e-22 Score=158.64 Aligned_cols=100 Identities=25% Similarity=0.359 Sum_probs=96.0
Q ss_pred hhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCC-CCcHH
Q 020810 221 EAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKN-KNTAL 299 (321)
Q Consensus 221 ~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~-g~TpL 299 (321)
.++..+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+. ++.+++++|+++|++++.+|.. |+|||
T Consensus 4 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L 82 (136)
T 1d9s_A 4 GIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPV 82 (136)
T ss_dssp CCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHH
T ss_pred CccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHH
Confidence 346678899999999999999999999999999999999999999999999 9999999999999999999999 99999
Q ss_pred HHHHHCCcHHHHHHHHHCCCCC
Q 020810 300 HYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 300 h~A~~~g~~~iv~~Ll~~GAdv 321 (321)
|+|+..|+.+++++|+++|+++
T Consensus 83 ~~A~~~~~~~~v~~Ll~~ga~~ 104 (136)
T 1d9s_A 83 HDAAREGFLDTLVVLHRAGARL 104 (136)
T ss_dssp HHHHHHTCHHHHHHHHHTCCCC
T ss_pred HHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999999985
No 20
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.85 E-value=7.4e-21 Score=171.53 Aligned_cols=125 Identities=29% Similarity=0.381 Sum_probs=108.8
Q ss_pred CChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 020810 180 GGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEED 259 (321)
Q Consensus 180 g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d 259 (321)
.+|.+++...++.+++++|.+. +++ .+..+..|.||+|+|+..++.+++++|++.|++++.+|
T Consensus 87 ~TpLh~A~~~g~~~~v~~Ll~~----------------~a~-~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d 149 (269)
T 4b93_B 87 SSPLHVAALHGRADLIPLLLKH----------------GAN-AGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKD 149 (269)
T ss_dssp CCHHHHHHHTTCTTHHHHHHHT----------------TCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC
T ss_pred CCHHHHHHHcCcHHHHHHHHhc----------------CCC-cCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCC
Confidence 3678888888888888877543 222 34567789999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 260 SEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 260 ~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
..|+||||+|+..|+.++|++|+++|++++.++..|+||||+|+..|+.++|++|+++|||+
T Consensus 150 ~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~ 211 (269)
T 4b93_B 150 LSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASV 211 (269)
T ss_dssp TTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCS
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999985
No 21
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.85 E-value=5.3e-21 Score=159.67 Aligned_cols=124 Identities=22% Similarity=0.249 Sum_probs=112.0
Q ss_pred CChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 020810 180 GGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEED 259 (321)
Q Consensus 180 g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d 259 (321)
.++.+++...++.+++++|.+. +.+ .+..+..|+||||+|+..|+.+++++|+++|++++.+|
T Consensus 37 ~t~L~~A~~~~~~~~v~~Ll~~----------------g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 99 (172)
T 3v30_A 37 FTPLIWASAFGEIETVRFLLEW----------------GAD-PHILAKERESALSLASTGGYTDIVGLLLERDVDINIYD 99 (172)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHH----------------TCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHc----------------CCC-chhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCC
Confidence 4677788888888888887643 222 35567889999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCC
Q 020810 260 SEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAA 320 (321)
Q Consensus 260 ~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAd 320 (321)
..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 100 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~ 160 (172)
T 3v30_A 100 WNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILK 160 (172)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999998764
No 22
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.85 E-value=5.4e-21 Score=158.53 Aligned_cols=122 Identities=25% Similarity=0.277 Sum_probs=108.2
Q ss_pred CChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 020810 180 GGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEED 259 (321)
Q Consensus 180 g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d 259 (321)
.++.+++...++.++++.|.+. +.+ ++..+..|+||||+|+..|+.+++++|+++|++++.+|
T Consensus 43 ~t~L~~A~~~~~~~~v~~Ll~~----------------g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 105 (165)
T 3twr_A 43 STPLHFAAGYNRVSVVEYLLQH----------------GAD-VHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 105 (165)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHT----------------TCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CCHHHHHHHcChHHHHHHHHhc----------------CCC-CCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcC
Confidence 3677777778888888877643 222 45668889999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCC
Q 020810 260 SEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGA 319 (321)
Q Consensus 260 ~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GA 319 (321)
..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+. |+.+++++|+++||
T Consensus 106 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 106 LWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 999999999999999999999999999999999999999999877 89999999999997
No 23
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.85 E-value=3.1e-20 Score=154.97 Aligned_cols=122 Identities=27% Similarity=0.404 Sum_probs=109.1
Q ss_pred CChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 020810 180 GGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEED 259 (321)
Q Consensus 180 g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d 259 (321)
.++.+.+...++.++++.|.+. +.+ .+..+..|+||||+|+..|+.+++++|+++|++++..|
T Consensus 48 ~t~L~~A~~~~~~~~v~~Ll~~----------------g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~ 110 (169)
T 2y1l_E 48 WTPLHLAAFNGHLEIVEVLLKN----------------GAD-VNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNAND 110 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHT----------------TCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHc----------------CCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Confidence 4667777777888888777543 222 35567889999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCC
Q 020810 260 SEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENG 318 (321)
Q Consensus 260 ~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~G 318 (321)
..|+||||+|+..++.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 111 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 111 MEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999987
No 24
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.84 E-value=2e-20 Score=167.36 Aligned_cols=100 Identities=28% Similarity=0.262 Sum_probs=95.7
Q ss_pred hhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC-CCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHH
Q 020810 222 AEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSE-GRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALH 300 (321)
Q Consensus 222 ~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~-g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh 300 (321)
++..+..|.||||+|+..|+.++|++|+++|++++..+.. |+||||+|+..|+.++|++|+++|++++.+|..|+||||
T Consensus 151 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~ 230 (282)
T 1oy3_D 151 LEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLG 230 (282)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHH
Confidence 4567889999999999999999999999999999998854 999999999999999999999999999999999999999
Q ss_pred HHHHCCcHHHHHHHHHCCCCC
Q 020810 301 YAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 301 ~A~~~g~~~iv~~Ll~~GAdv 321 (321)
+|+..|+.+++++|+++||++
T Consensus 231 ~A~~~~~~~~v~~Ll~~ga~~ 251 (282)
T 1oy3_D 231 SALLRPNPILARLLRAHGAPE 251 (282)
T ss_dssp HHHTSSCHHHHHHHHHTTCCC
T ss_pred HHHHcCCcHHHHHHHHcCCCc
Confidence 999999999999999999986
No 25
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.84 E-value=1.5e-20 Score=155.03 Aligned_cols=121 Identities=26% Similarity=0.272 Sum_probs=106.1
Q ss_pred hHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Q 020810 182 PSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSE 261 (321)
Q Consensus 182 ~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~ 261 (321)
+...+...++.++++.|. ..+.+ .+..+..|+||||+|+. |+.+++++|+++|++++.+|..
T Consensus 8 ~L~~A~~~g~~~~v~~Ll----------------~~~~~-~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~ 69 (162)
T 1ihb_A 8 ELASAAARGDLEQLTSLL----------------QNNVN-VNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRT 69 (162)
T ss_dssp HHHHHHHHTCHHHHHHHT----------------TSCCC-TTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTT
T ss_pred HHHHHHHcCCHHHHHHHH----------------hCCCC-ccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCC
Confidence 444555556666666653 22333 35668899999999999 9999999999999999999999
Q ss_pred CCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCC
Q 020810 262 GRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAA 320 (321)
Q Consensus 262 g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAd 320 (321)
|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 70 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 128 (162)
T 1ihb_A 70 GFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTAS 128 (162)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCC
Confidence 99999999999999999999999999999999999999999999999999999999986
No 26
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.84 E-value=2.4e-20 Score=165.70 Aligned_cols=94 Identities=27% Similarity=0.292 Sum_probs=51.6
Q ss_pred hhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHH
Q 020810 223 EEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYA 302 (321)
Q Consensus 223 ~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A 302 (321)
+..+..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 151 ~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 230 (253)
T 1yyh_A 151 NAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIA 230 (253)
T ss_dssp TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHH
Confidence 34445555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred HHCCcHHHHHHHHH
Q 020810 303 AGYGRKECVALLLE 316 (321)
Q Consensus 303 ~~~g~~~iv~~Ll~ 316 (321)
+..|+.+|+++|..
T Consensus 231 ~~~g~~~i~~~l~~ 244 (253)
T 1yyh_A 231 QERMHHDIVRLLDL 244 (253)
T ss_dssp HHTTCHHHHHHHHC
T ss_pred HHcCCHHHHHHHHH
Confidence 55555555555543
No 27
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.84 E-value=5.7e-20 Score=159.29 Aligned_cols=107 Identities=27% Similarity=0.289 Sum_probs=91.2
Q ss_pred hhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCcc
Q 020810 213 SADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALD 292 (321)
Q Consensus 213 ~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d 292 (321)
.++..+.+ ++..+..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|
T Consensus 110 ~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 188 (223)
T 2f8y_A 110 DLINSHAD-VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITD 188 (223)
T ss_dssp HHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHcCCC-CcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccc
Confidence 33344444 45667888999999999999999999999999998888899999999999999999999999999999888
Q ss_pred CCCCcHHHHHHHCCcHHHHHHHHHCCCC
Q 020810 293 KNKNTALHYAAGYGRKECVALLLENGAA 320 (321)
Q Consensus 293 ~~g~TpLh~A~~~g~~~iv~~Ll~~GAd 320 (321)
..|.||||+|+..|+.+++++|+++|+.
T Consensus 189 ~~g~t~l~~A~~~~~~~i~~~L~~~g~~ 216 (223)
T 2f8y_A 189 HMDRLPRDIAQERMHHDIVRLLDEYNLV 216 (223)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCS
T ss_pred ccCCCHHHHHHHhcchHHHHHHHHcCCC
Confidence 8999999999999999999999998875
No 28
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.84 E-value=1.4e-20 Score=169.68 Aligned_cols=111 Identities=29% Similarity=0.431 Sum_probs=99.8
Q ss_pred ccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCC
Q 020810 210 ATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVD 289 (321)
Q Consensus 210 ~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~ 289 (321)
.+..++..|.+ ++..|.+|+||||+||..|+.++|++|++.|++++..+..|.||+|+|+..++.+++++|+++|++++
T Consensus 68 ~v~~Ll~~Gad-vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n 146 (269)
T 4b93_B 68 RLAKVPASGLG-VNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPN 146 (269)
T ss_dssp -------CCCC-TTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC
T ss_pred HHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCC
Confidence 44556666665 46788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 290 ALDKNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 290 ~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
.+|..|+||||+|+..|+.++|++|+++||+|
T Consensus 147 ~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadv 178 (269)
T 4b93_B 147 KKDLSGNTPLIYACSGGHHELVALLLQHGASI 178 (269)
T ss_dssp CCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCT
T ss_pred CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC
Confidence 99999999999999999999999999999986
No 29
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.84 E-value=1.1e-20 Score=152.26 Aligned_cols=96 Identities=33% Similarity=0.468 Sum_probs=92.5
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHC
Q 020810 226 GNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGY 305 (321)
Q Consensus 226 d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~ 305 (321)
...+.|+||+||..|+.+++++|++.|++++..|..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+..
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 90 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFI 90 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 55688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHCCCCC
Q 020810 306 GRKECVALLLENGAAV 321 (321)
Q Consensus 306 g~~~iv~~Ll~~GAdv 321 (321)
|+.+++++|+++|+++
T Consensus 91 ~~~~~v~~Ll~~g~~~ 106 (136)
T 2jab_A 91 GHLEIAEVLLKHGADV 106 (136)
T ss_dssp TCHHHHHHHHHTTCCT
T ss_pred CCHHHHHHHHHcCCCC
Confidence 9999999999999985
No 30
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.84 E-value=2.3e-20 Score=153.09 Aligned_cols=104 Identities=24% Similarity=0.290 Sum_probs=83.3
Q ss_pred chhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCc
Q 020810 212 TSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDAL 291 (321)
Q Consensus 212 ~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~ 291 (321)
..++..+.+ .+..|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++. ++++.+
T Consensus 52 ~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~ 129 (156)
T 1bd8_A 52 LELLKQGAS-PNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRR 129 (156)
T ss_dssp HHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCC
T ss_pred HHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCc
Confidence 334444444 356677788888888888888888888888888888888888888888888888888888888 888888
Q ss_pred cCCCCcHHHHHHHCCcHHHHHHHHHC
Q 020810 292 DKNKNTALHYAAGYGRKECVALLLEN 317 (321)
Q Consensus 292 d~~g~TpLh~A~~~g~~~iv~~Ll~~ 317 (321)
|..|.||||+|+..|+.+++++|+++
T Consensus 130 ~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 130 DARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp CTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 88888888888888888888888764
No 31
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.84 E-value=1.6e-20 Score=158.05 Aligned_cols=125 Identities=22% Similarity=0.231 Sum_probs=112.8
Q ss_pred CChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 020810 180 GGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEED 259 (321)
Q Consensus 180 g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d 259 (321)
.++.+++...++.++++.|.+. +.+ ++..+..|.||||+|+..|+.+++++|+++|++++.+|
T Consensus 40 ~t~L~~A~~~~~~~~v~~Ll~~----------------g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d 102 (179)
T 3f6q_A 40 FSPLHWACREGRSAVVEMLIMR----------------GAR-INVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 102 (179)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHT----------------TCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CCHHHHHHHcCcHHHHHHHHHc----------------CCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccC
Confidence 3677777777888888777543 222 35668889999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 260 SEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 260 ~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
..|+||||+|+..++.+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|+++
T Consensus 103 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~ 164 (179)
T 3f6q_A 103 EHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNL 164 (179)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCc
Confidence 99999999999999999999999999999999999999999999999999999999999985
No 32
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.84 E-value=4.1e-20 Score=157.12 Aligned_cols=125 Identities=26% Similarity=0.341 Sum_probs=113.6
Q ss_pred CChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 020810 180 GGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEED 259 (321)
Q Consensus 180 g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d 259 (321)
.++.+.+...++.++++.|.+.. . ..+..+..|+||||+|+..|+.+++++|++.|++++..|
T Consensus 36 ~t~L~~A~~~g~~~~v~~Ll~~~----------------~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 98 (192)
T 2rfm_A 36 RTPLMVACMLGMENAIDKLVENF----------------D-KLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKD 98 (192)
T ss_dssp CCHHHHHHHHTCGGGHHHHHHHH----------------C-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHhc----------------c-ccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Confidence 46777778888888888886541 1 234567889999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 260 SEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 260 ~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+++
T Consensus 99 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 160 (192)
T 2rfm_A 99 FSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADI 160 (192)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999985
No 33
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.83 E-value=7.9e-20 Score=149.85 Aligned_cols=119 Identities=24% Similarity=0.311 Sum_probs=107.0
Q ss_pred cCChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q 020810 179 SGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEE 258 (321)
Q Consensus 179 ~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~ 258 (321)
..++.+.+...++.++++.|.+. +.+ .+..+..|+||||+|+..|+.+++++|+++|++++.+
T Consensus 34 g~t~L~~A~~~~~~~~v~~Ll~~----------------g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 96 (153)
T 1awc_B 34 GTSPLHLAAQYGHFSTTEVLLRA----------------GVS-RDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAK 96 (153)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHTT----------------TCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHc----------------CCC-CCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCC
Confidence 34677888888888888877532 222 3566788999999999999999999999999999999
Q ss_pred CCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHH
Q 020810 259 DSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALL 314 (321)
Q Consensus 259 d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~L 314 (321)
|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 97 ~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 97 DMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999987
No 34
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.83 E-value=2.6e-20 Score=154.70 Aligned_cols=124 Identities=25% Similarity=0.302 Sum_probs=110.8
Q ss_pred CChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 020810 180 GGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEED 259 (321)
Q Consensus 180 g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d 259 (321)
.++.+++...++.++++.|.+. +.+ .+..+..|.||||+|+..|+.+++++|+++|++++.+|
T Consensus 37 ~t~L~~A~~~~~~~~v~~Ll~~----------------g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 99 (167)
T 3v31_A 37 FTPLMWAAAHGQIAVVEFLLQN----------------GAD-PQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYD 99 (167)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHT----------------TCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCC
T ss_pred CCHHHHHHHCCCHHHHHHHHHc----------------CCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCC
Confidence 4677777778888888887643 222 34567889999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCC
Q 020810 260 SEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAA 320 (321)
Q Consensus 260 ~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAd 320 (321)
..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++++
T Consensus 100 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~ 160 (167)
T 3v31_A 100 WNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLK 160 (167)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999987653
No 35
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.83 E-value=6.3e-20 Score=160.14 Aligned_cols=126 Identities=31% Similarity=0.340 Sum_probs=108.7
Q ss_pred CChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCC----
Q 020810 180 GGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADK---- 255 (321)
Q Consensus 180 g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~---- 255 (321)
.++.+.+...++.++++.|.+.. ...++..|..|+||||+||..|+.+++++|++.|+++
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~~----------------g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~ 67 (232)
T 2rfa_A 4 ESPLLLAAKENDVQALSKLLKFE----------------GCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEP 67 (232)
T ss_dssp TCHHHHHHHTTCHHHHHHHHTTT----------------CSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHhc----------------CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhcccc
Confidence 46677777778888877775321 2234667889999999999999999999999999886
Q ss_pred -CCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccC-------------CCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 256 -DEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDK-------------NKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 256 -~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~-------------~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
+..|..|+||||+|+..|+.+++++|+++|++++..+. .|+||||+|+..|+.++|++|+++|+++
T Consensus 68 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 147 (232)
T 2rfa_A 68 MTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADI 147 (232)
T ss_dssp CCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred ccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 67788999999999999999999999999999988765 7999999999999999999999999985
No 36
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.83 E-value=1.7e-20 Score=170.07 Aligned_cols=98 Identities=20% Similarity=0.362 Sum_probs=94.0
Q ss_pred hhcCCCCchHHHHHHHc---CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHH
Q 020810 223 EEVGNEDESIVHHTASV---GDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTAL 299 (321)
Q Consensus 223 ~~~d~~g~t~Lh~Aa~~---g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL 299 (321)
+..+..|+||||+|+.. |+.+++++|+++|++++.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+|||
T Consensus 163 ~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL 242 (278)
T 1dcq_A 163 ANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPL 242 (278)
T ss_dssp SSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred cccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHH
Confidence 33477899999999999 899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCcHHHHHHHHHCCCC
Q 020810 300 HYAAGYGRKECVALLLENGAA 320 (321)
Q Consensus 300 h~A~~~g~~~iv~~Ll~~GAd 320 (321)
|+|+..|+.++|++|+++||+
T Consensus 243 ~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 243 DIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp HHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999885
No 37
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.83 E-value=6.8e-20 Score=150.26 Aligned_cols=122 Identities=18% Similarity=0.242 Sum_probs=107.1
Q ss_pred hHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Q 020810 182 PSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSE 261 (321)
Q Consensus 182 ~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~ 261 (321)
+...+...++.+.++.+.+. .....+..+..|+||||+ |..|+.+++++|+++|++++.+|..
T Consensus 5 ~L~~A~~~g~~~~v~~ll~~----------------~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~ 67 (156)
T 1bd8_A 5 RLSGAAARGDVQEVRRLLHR----------------ELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTS 67 (156)
T ss_dssp HHHHHHHHTCHHHHHHHHHT----------------TCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred HHHHHHHhCCHHHHHHHHHh----------------hCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCC
Confidence 44556666777777777543 112345668889999999 9999999999999999999999999
Q ss_pred CCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 262 GRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 262 g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++ +++
T Consensus 68 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~ 126 (156)
T 1bd8_A 68 GTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDL 126 (156)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCT
T ss_pred CCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCC
Confidence 99999999999999999999999999999999999999999999999999999987 654
No 38
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.83 E-value=1.1e-19 Score=158.25 Aligned_cols=125 Identities=28% Similarity=0.316 Sum_probs=93.2
Q ss_pred CChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 020810 180 GGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEED 259 (321)
Q Consensus 180 g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d 259 (321)
.++.+++...++.++++.|.+. +.+ .+..+..|.||||+|+..|+.+++++|+++|++++..|
T Consensus 74 ~t~L~~A~~~~~~~~v~~Ll~~----------------g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~ 136 (231)
T 3aji_A 74 WSPLHIAASAGXDEIVKALLVK----------------GAH-VNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKD 136 (231)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHT----------------TCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CCHHHHHHHcCHHHHHHHHHHc----------------CCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 3566667777777777776543 222 24456677788888888888888888888888877777
Q ss_pred CCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 260 SEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 260 ~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+++
T Consensus 137 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 198 (231)
T 3aji_A 137 HYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASI 198 (231)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC
Confidence 77888888888888888888888888888877778888888888888888888888877764
No 39
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.83 E-value=7.7e-20 Score=159.30 Aligned_cols=100 Identities=35% Similarity=0.414 Sum_probs=89.1
Q ss_pred hhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHH
Q 020810 222 AEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHY 301 (321)
Q Consensus 222 ~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~ 301 (321)
.+..+..|+||||+|+..|+.+++++|+++|++++..|..|+||||+|+..++.+++++|+++|++++.+|..|.||||+
T Consensus 66 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~ 145 (231)
T 3aji_A 66 VNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHR 145 (231)
T ss_dssp SCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHH
Confidence 45667888999999999999999999999999999888899999999999999999999999999999888899999999
Q ss_pred HHHCCcHHHHHHHHHCCCCC
Q 020810 302 AAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 302 A~~~g~~~iv~~Ll~~GAdv 321 (321)
|+..|+.+++++|+++|+++
T Consensus 146 A~~~~~~~~v~~Ll~~g~~~ 165 (231)
T 3aji_A 146 AAAKGNLKMVHILLFYKAST 165 (231)
T ss_dssp HHHHTCHHHHHHHHHTTCCS
T ss_pred HHHcCCHHHHHHHHhcCCCc
Confidence 99999999999999988875
No 40
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.83 E-value=1.2e-19 Score=157.52 Aligned_cols=126 Identities=21% Similarity=0.217 Sum_probs=111.2
Q ss_pred CChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcC-CchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q 020810 180 GGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAG-ADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEE 258 (321)
Q Consensus 180 g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~-~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~ 258 (321)
.++.+.+...++.++++.|.+. + ....+..+..|.||||+|+..|+.+++++|+++|++++.+
T Consensus 73 ~t~L~~A~~~~~~~~~~~Ll~~----------------g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~ 136 (228)
T 2dzn_A 73 WTPFHIACSVGNLEVVKSLYDR----------------PLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIK 136 (228)
T ss_dssp CCHHHHHHHHCCHHHHHHHHSS----------------SSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCC
T ss_pred CCHHHHHHHcCCHHHHHHHHhC----------------CCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCcccc
Confidence 3667777777777777776432 2 1234566888999999999999999999999999999999
Q ss_pred CCCCCcHHHHHHHCCCHHHHHHHHHcC-CCCCCccCCCCcHHHHHHHCCcHHHHHHHH-HCCCCC
Q 020810 259 DSEGRTALHFACGYGEVKCAQILLEAG-ANVDALDKNKNTALHYAAGYGRKECVALLL-ENGAAV 321 (321)
Q Consensus 259 d~~g~TpLh~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll-~~GAdv 321 (321)
|..|+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|+ ++|+++
T Consensus 137 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~ 201 (228)
T 2dzn_A 137 DKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEY 201 (228)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCS
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCC
Confidence 999999999999999999999999999 999999999999999999999999999999 889985
No 41
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.83 E-value=3.6e-20 Score=144.06 Aligned_cols=94 Identities=30% Similarity=0.480 Sum_probs=86.7
Q ss_pred hhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHH
Q 020810 221 EAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALH 300 (321)
Q Consensus 221 ~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh 300 (321)
.....+.+|.|+||+||..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||
T Consensus 16 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~ 95 (110)
T 2zgd_A 16 RGSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFD 95 (110)
T ss_dssp ------CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred cccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHH
Confidence 34566889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCcHHHHHHH
Q 020810 301 YAAGYGRKECVALL 314 (321)
Q Consensus 301 ~A~~~g~~~iv~~L 314 (321)
+|+..|+.+++++|
T Consensus 96 ~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 96 ISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHTCHHHHHHH
T ss_pred HHHHcCCHHHHHHh
Confidence 99999999999987
No 42
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.83 E-value=1.4e-19 Score=157.88 Aligned_cols=131 Identities=22% Similarity=0.230 Sum_probs=111.8
Q ss_pred cCChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q 020810 179 SGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEE 258 (321)
Q Consensus 179 ~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~ 258 (321)
..++.+++...++.++++.|.+...... ....+..|..|+||||+|+..|+.+++++|+++|++++..
T Consensus 37 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~------------~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 104 (232)
T 2rfa_A 37 GETALHIAALYDNLEAAMVLMEAAPELV------------FEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSAR 104 (232)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHCGGGG------------GCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCchhc------------cccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcc
Confidence 3467888888888888888875411000 0112445778999999999999999999999999999887
Q ss_pred CC-------------CCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHH----HHHHHCCCCC
Q 020810 259 DS-------------EGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECV----ALLLENGAAV 321 (321)
Q Consensus 259 d~-------------~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv----~~Ll~~GAdv 321 (321)
+. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++ ++|+++|+++
T Consensus 105 ~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~ 184 (232)
T 2rfa_A 105 ATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGD 184 (232)
T ss_dssp CCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSC
T ss_pred cCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCch
Confidence 65 799999999999999999999999999999999999999999999999988 9999999863
No 43
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.82 E-value=4e-20 Score=166.99 Aligned_cols=138 Identities=22% Similarity=0.256 Sum_probs=113.7
Q ss_pred CChHHHHHHhCChhHHHHHHHHhccccC-----------------------CcccchhhhcCCchhhhcCCCCchHHHHH
Q 020810 180 GGPSAMMKYWNDKDVLQKLGEAMGLAVG-----------------------GDATTSADNAGADEAEEVGNEDESIVHHT 236 (321)
Q Consensus 180 g~~~~~~~~~~~~~~~~~l~~~~~~~~~-----------------------~d~~~~~~~~~~~~~~~~d~~g~t~Lh~A 236 (321)
.++.+.+...++.++++.|.+.-..... .+.+..++..+ ...+..+..|+||||+|
T Consensus 112 ~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g-~~~~~~~~~g~tpLh~A 190 (276)
T 4hbd_A 112 NTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLG-NINAKASQAGQTALMLA 190 (276)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHS-CTTCCCTTTCCCHHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcC-CCccccCCCCCCHHHHH
Confidence 3677777777888888887765320000 01122233333 33456678899999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHH-cCCCCCCccCCCCcHHHHHHHCCcHHHHHHHH
Q 020810 237 ASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLE-AGANVDALDKNKNTALHYAAGYGRKECVALLL 315 (321)
Q Consensus 237 a~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll 315 (321)
+..|+.++|++|+++|++++.+|..|+||||+|+..|+.++|++|++ .|++++.+|..|+||||+|+..|+.+++++|+
T Consensus 191 ~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll 270 (276)
T 4hbd_A 191 VSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLY 270 (276)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 89999999999999999999999999999999
Q ss_pred HCC
Q 020810 316 ENG 318 (321)
Q Consensus 316 ~~G 318 (321)
+++
T Consensus 271 ~~~ 273 (276)
T 4hbd_A 271 SRM 273 (276)
T ss_dssp HHC
T ss_pred hcc
Confidence 874
No 44
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.82 E-value=2.2e-20 Score=164.92 Aligned_cols=97 Identities=26% Similarity=0.352 Sum_probs=50.8
Q ss_pred hhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCC-cHHHH
Q 020810 223 EEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKN-TALHY 301 (321)
Q Consensus 223 ~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~-TpLh~ 301 (321)
+..|..|+||||+||..|+.++|++|+++|++++.+|..|+||||+|+..|+.++|++|+++|++++.++..|. ||||+
T Consensus 64 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~ 143 (239)
T 1ycs_B 64 SLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADK 143 (239)
T ss_dssp CCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHH
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHH
Confidence 44444555555555555555555555555555555555555555555555555555555555555555554444 55555
Q ss_pred H--HHCCcHHHHHHHHHCCC
Q 020810 302 A--AGYGRKECVALLLENGA 319 (321)
Q Consensus 302 A--~~~g~~~iv~~Ll~~GA 319 (321)
| +..|+.+++++|+++|+
T Consensus 144 a~~~~~g~~~~~~~Ll~~~a 163 (239)
T 1ycs_B 144 CEEMEEGYTQCSQFLYGVQE 163 (239)
T ss_dssp CCSSSTTCCCHHHHHHHHHH
T ss_pred HHHhhhccHHHHHHHHHhhh
Confidence 5 44455555555555444
No 45
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.82 E-value=4.1e-20 Score=162.09 Aligned_cols=130 Identities=16% Similarity=0.149 Sum_probs=112.7
Q ss_pred CChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 020810 180 GGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEED 259 (321)
Q Consensus 180 g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d 259 (321)
.++.+++...+..++++.|.+..... ......+..+..|.||||+|+..|+.++|++|+++|++++.++
T Consensus 79 ~t~L~~A~~~~~~~~v~~Ll~~~~~~-----------~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 147 (236)
T 1ikn_D 79 NTPLHLACEQGCLASVGVLTQSCTTP-----------HLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQE 147 (236)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHSTTTT-----------SSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCC
T ss_pred CCHHHHHHHcCCHHHHHHHHhcccch-----------hHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Confidence 46677777777888887776432110 0122346678889999999999999999999999999999999
Q ss_pred C-CCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCC
Q 020810 260 S-EGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAA 320 (321)
Q Consensus 260 ~-~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAd 320 (321)
. .|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++|+++||+
T Consensus 148 ~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~ 209 (236)
T 1ikn_D 148 PCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE 209 (236)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCG
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchh
Confidence 7 999999999999999999999999999999999999999999999999999999999996
No 46
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.82 E-value=1.8e-19 Score=156.11 Aligned_cols=127 Identities=25% Similarity=0.287 Sum_probs=115.1
Q ss_pred cCChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q 020810 179 SGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEE 258 (321)
Q Consensus 179 ~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~ 258 (321)
..++.+.+...++.++++.|.+. ++...+..+..|.||||+|+..|+.+++++|++.|++++..
T Consensus 58 g~t~L~~A~~~~~~~~v~~Ll~~----------------~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~ 121 (223)
T 2f8y_A 58 GRTPLHAAVSADAQGVFQILIRN----------------RATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAV 121 (223)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHB----------------TTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCB
T ss_pred CCCHHHHHHHcCCHHHHHHHHHc----------------CCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCc
Confidence 34677788888888888888643 33344666888999999999999999999999999999999
Q ss_pred CCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 259 DSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 259 d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|+++
T Consensus 122 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 184 (223)
T 2f8y_A 122 DDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANR 184 (223)
T ss_dssp CTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999975
No 47
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.82 E-value=1.6e-20 Score=165.34 Aligned_cols=122 Identities=20% Similarity=0.238 Sum_probs=106.8
Q ss_pred HHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Q 020810 183 SAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEG 262 (321)
Q Consensus 183 ~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g 262 (321)
...+...++.++++.|.+. +.+ ++..|..|+||||+||..|+.++|++|++.|++++.+|..|
T Consensus 25 L~~A~~~g~~~~v~~Ll~~----------------g~~-~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g 87 (229)
T 2vge_A 25 LLDAALTGELEVVQQAVKE----------------MND-PSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHG 87 (229)
T ss_dssp HHHHHHHTCHHHHHHHHHH----------------SSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTC
T ss_pred HHHHHHcCCHHHHHHHHhc----------------CCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Confidence 4445566777777776543 232 35678899999999999999999999999999999999999
Q ss_pred CcHHHHHHHCCCHHHHHHHHHcCCCCCCcc-CCCCcHHHHH--HHCCcHHHHHHHHHCCCCC
Q 020810 263 RTALHFACGYGEVKCAQILLEAGANVDALD-KNKNTALHYA--AGYGRKECVALLLENGAAV 321 (321)
Q Consensus 263 ~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d-~~g~TpLh~A--~~~g~~~iv~~Ll~~GAdv 321 (321)
+||||+|+..|+.+++++|+++|++++..+ ..|+||||+| +..|+.+++++|+++|+++
T Consensus 88 ~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~ 149 (229)
T 2vge_A 88 WTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSM 149 (229)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCc
Confidence 999999999999999999999999999986 6999999999 9999999999999998764
No 48
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.82 E-value=9.7e-20 Score=162.88 Aligned_cols=107 Identities=23% Similarity=0.275 Sum_probs=83.6
Q ss_pred hhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCC---------------------------------------
Q 020810 214 ADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGAD--------------------------------------- 254 (321)
Q Consensus 214 ~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~--------------------------------------- 254 (321)
++..|.+ ++..+..|+||||+|+..|+.+++++|+++|++
T Consensus 64 Ll~~ga~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (282)
T 1oy3_D 64 LYAAGAG-VLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEP 142 (282)
T ss_dssp HHHTTCC-SSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC----------------------------------
T ss_pred HHHcCCC-CCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhh
Confidence 3344444 345667788888888888888888888876654
Q ss_pred --------CCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCC-CCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 255 --------KDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKN-KNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 255 --------~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~-g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
++..+..|+||||+|+..|+.++|++|+++|++++..+.. |+||||+|+..|+.++|++|+++|+++
T Consensus 143 ~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~ 218 (282)
T 1oy3_D 143 RDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADP 218 (282)
T ss_dssp -CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred hhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 5666778888888888888888888888888888888754 888888888888888888888888875
No 49
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.82 E-value=7.7e-20 Score=143.75 Aligned_cols=94 Identities=47% Similarity=0.633 Sum_probs=91.5
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCc
Q 020810 228 EDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGR 307 (321)
Q Consensus 228 ~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~ 307 (321)
+|+||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++|++.|++++.+|..|+||||+|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCC
Q 020810 308 KECVALLLENGAAV 321 (321)
Q Consensus 308 ~~iv~~Ll~~GAdv 321 (321)
.+++++|+++|+++
T Consensus 81 ~~~~~~Ll~~g~~~ 94 (126)
T 1n0r_A 81 LEVVKLLLEAGADV 94 (126)
T ss_dssp HHHHHHHHHTTCCT
T ss_pred HHHHHHHHHcCCCC
Confidence 99999999999875
No 50
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.82 E-value=1.8e-19 Score=157.58 Aligned_cols=125 Identities=25% Similarity=0.289 Sum_probs=109.8
Q ss_pred ChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 020810 181 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDS 260 (321)
Q Consensus 181 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~ 260 (321)
++.+.+...++.++++.|.+ .++...+..+..|.||||+|+..|+.+++++|++.|++++.+|.
T Consensus 79 t~L~~A~~~~~~~~~~~Ll~----------------~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 142 (237)
T 3b7b_A 79 TCLHLAAKKGHYEVVQYLLS----------------NGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDN 142 (237)
T ss_dssp CHHHHHHHTTCHHHHHHHHT----------------TTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred cHHHHHHHcCCHHHHHHHHh----------------CCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCC
Confidence 55666666666676666643 33344566788899999999999999999999999999999999
Q ss_pred CCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 261 EGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 261 ~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
.|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|+++
T Consensus 143 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~ 203 (237)
T 3b7b_A 143 EENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDV 203 (237)
T ss_dssp TSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999985
No 51
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.82 E-value=1.6e-19 Score=153.95 Aligned_cols=123 Identities=23% Similarity=0.273 Sum_probs=107.0
Q ss_pred CChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcC-CCCCCC
Q 020810 180 GGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAG-ADKDEE 258 (321)
Q Consensus 180 g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g-~~~~~~ 258 (321)
.++.+.+...++.++++.|.+. +....+..+..|.||||+|+..|+.+++++|++.| ++++.+
T Consensus 73 ~t~l~~A~~~~~~~~~~~Ll~~----------------~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 136 (201)
T 3hra_A 73 DSPYLYAGAQGRTEILAYMLKH----------------ATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQ 136 (201)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHH----------------SCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCC
T ss_pred CCHHHHHHHcCCHHHHHHHHhc----------------cCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCC
Confidence 3566666666777777666533 23335667888999999999999999999999998 999999
Q ss_pred CCCCCcHHHHHHHCCC-----HHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCC
Q 020810 259 DSEGRTALHFACGYGE-----VKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENG 318 (321)
Q Consensus 259 d~~g~TpLh~A~~~g~-----~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~G 318 (321)
|..|+||||+|+..+. .+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 137 ~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 137 NDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp CTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred CCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 9999999999999998 99999999999999999999999999999999999999999987
No 52
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.82 E-value=1.1e-19 Score=167.31 Aligned_cols=100 Identities=33% Similarity=0.453 Sum_probs=96.5
Q ss_pred hhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHH
Q 020810 222 AEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHY 301 (321)
Q Consensus 222 ~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~ 301 (321)
.+..|..|+||||+||..|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..|..|+||||+
T Consensus 51 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~ 130 (351)
T 3utm_A 51 CHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHE 130 (351)
T ss_dssp CCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred cccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence 45668889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHCCcHHHHHHHHHCCCCC
Q 020810 302 AAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 302 A~~~g~~~iv~~Ll~~GAdv 321 (321)
|+..|+.+++++|+++|+++
T Consensus 131 A~~~~~~~~v~~Ll~~g~~~ 150 (351)
T 3utm_A 131 AASKNRVEVCSLLLSHGADP 150 (351)
T ss_dssp HHHTTCHHHHHHHHHTTCCT
T ss_pred HHHcCCHHHHHHHHHcCCCC
Confidence 99999999999999999974
No 53
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.82 E-value=3e-19 Score=156.24 Aligned_cols=129 Identities=26% Similarity=0.304 Sum_probs=110.3
Q ss_pred CChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 020810 180 GGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEED 259 (321)
Q Consensus 180 g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d 259 (321)
..+.+.+...++.++++.|.+.... .....+..+..|+||||+|+..|+.+++++|++.|++++..+
T Consensus 80 ~t~l~~A~~~~~~~~~~~Ll~~~~~-------------~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~ 146 (241)
T 1k1a_A 80 QTAAHLACEHRSPTCLRALLDSAAP-------------GTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVD 146 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHSCT-------------TSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC-------------ccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCccccc
Confidence 3566777777777777777654210 011245567889999999999999999999999999999988
Q ss_pred -CCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 260 -SEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 260 -~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+++
T Consensus 147 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 209 (241)
T 1k1a_A 147 IKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADS 209 (241)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred ccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCC
Confidence 88999999999999999999999999999999999999999999999999999999999985
No 54
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.82 E-value=3e-19 Score=155.04 Aligned_cols=128 Identities=27% Similarity=0.298 Sum_probs=110.7
Q ss_pred CChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcC--CCCCC
Q 020810 180 GGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAG--ADKDE 257 (321)
Q Consensus 180 g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g--~~~~~ 257 (321)
.++.+.+...++.++++.|.+.. ...+.....+..|+||||+|+..|+.+++++|+++| ++++.
T Consensus 37 ~t~L~~A~~~~~~~~v~~Ll~~~--------------~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~ 102 (228)
T 2dzn_A 37 RIPLHWSVSFQAHEITSFLLSKM--------------ENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNK 102 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTC--------------TTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHhcc--------------ccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccc
Confidence 35677777777777777765431 013333336889999999999999999999999998 88999
Q ss_pred CCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCC-CCC
Q 020810 258 EDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENG-AAV 321 (321)
Q Consensus 258 ~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~G-Adv 321 (321)
.+..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++| +++
T Consensus 103 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 167 (228)
T 2dzn_A 103 ITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAV 167 (228)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCS
T ss_pred CCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccc
Confidence 9999999999999999999999999999999999999999999999999999999999999 764
No 55
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.82 E-value=2.8e-20 Score=161.89 Aligned_cols=97 Identities=29% Similarity=0.382 Sum_probs=65.5
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHc-CCCCCCccCCCCcHHHHHH
Q 020810 225 VGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEA-GANVDALDKNKNTALHYAA 303 (321)
Q Consensus 225 ~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~TpLh~A~ 303 (321)
.+..|.||||+||..|+.++|++|++.|++++.+|..|+||||+|+..|+.++|++|++. |++++.+|..|+||||+|+
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~ 148 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAA 148 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHH
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHH
Confidence 345566666666666666666666666666666666666666666666666666666666 6666666666666666666
Q ss_pred HCCcHHHHHHHHHCCCCC
Q 020810 304 GYGRKECVALLLENGAAV 321 (321)
Q Consensus 304 ~~g~~~iv~~Ll~~GAdv 321 (321)
..|+.++|++|+++||++
T Consensus 149 ~~~~~~~v~~Ll~~ga~~ 166 (222)
T 3ehr_A 149 WKGYADIVQLLLAKGART 166 (222)
T ss_dssp HHTCHHHHHHHHHHTCCS
T ss_pred HcCCHHHHHHHHHcCCCC
Confidence 666666666666666653
No 56
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.82 E-value=6.9e-20 Score=161.24 Aligned_cols=99 Identities=28% Similarity=0.329 Sum_probs=95.4
Q ss_pred hhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHH
Q 020810 223 EEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYA 302 (321)
Q Consensus 223 ~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A 302 (321)
+..+..+.|+||+||..|+.++|++|++.|++++.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|
T Consensus 15 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A 94 (229)
T 2vge_A 15 RRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCA 94 (229)
T ss_dssp CCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred cccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 45577889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHCCcHHHHHHHHHCCCCC
Q 020810 303 AGYGRKECVALLLENGAAV 321 (321)
Q Consensus 303 ~~~g~~~iv~~Ll~~GAdv 321 (321)
+..|+.++|++|+++|+++
T Consensus 95 ~~~g~~~~v~~Ll~~ga~~ 113 (229)
T 2vge_A 95 ASCNDTVICMALVQHGAAI 113 (229)
T ss_dssp HHTTCHHHHHHHHTTTCCT
T ss_pred HHcCCHHHHHHHHHcCCCc
Confidence 9999999999999999985
No 57
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.81 E-value=1.5e-19 Score=176.64 Aligned_cols=96 Identities=27% Similarity=0.411 Sum_probs=92.1
Q ss_pred CCCCchHHHHHHH---cCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHH
Q 020810 226 GNEDESIVHHTAS---VGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYA 302 (321)
Q Consensus 226 d~~g~t~Lh~Aa~---~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A 302 (321)
+..|+||||+||. .|+.++|++||++|++++.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|
T Consensus 168 ~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 247 (497)
T 3lvq_E 168 QAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIA 247 (497)
T ss_dssp CCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHH
T ss_pred ccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 7789999999976 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHCCcHHHHHHHHHCCCCC
Q 020810 303 AGYGRKECVALLLENGAAV 321 (321)
Q Consensus 303 ~~~g~~~iv~~Ll~~GAdv 321 (321)
+..|+.+++++|+++||++
T Consensus 248 ~~~~~~~~~~~Ll~~ga~~ 266 (497)
T 3lvq_E 248 RKKHHKECEELLEQAQAGT 266 (497)
T ss_dssp HHTTCHHHHHHHHHTCC--
T ss_pred HHcCCHHHHHHHHHhCCCC
Confidence 9999999999999999985
No 58
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.81 E-value=7.7e-20 Score=163.97 Aligned_cols=137 Identities=19% Similarity=0.124 Sum_probs=109.8
Q ss_pred cCChHHHHHHhCChhHHHHHHHHhccccC-CcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHH---cCCC
Q 020810 179 SGGPSAMMKYWNDKDVLQKLGEAMGLAVG-GDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALA---AGAD 254 (321)
Q Consensus 179 ~g~~~~~~~~~~~~~~~~~l~~~~~~~~~-~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~---~g~~ 254 (321)
..++.+++...++.++++.|.+. +.... .+..... ........+..|+||||+|+..|+.++|++|++ .|++
T Consensus 101 g~tpL~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~~~---~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad 176 (273)
T 2pnn_A 101 GQTALHIAIERRNMTLVTLLVEN-GADVQAAANGDFF---KKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPAD 176 (273)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCBCSGGG---SSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHC-CCCcCcccccccc---ccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCC
Confidence 34788888888888988888754 11100 0000000 000011223479999999999999999999999 9999
Q ss_pred CCCCCCCCCcHHHHHHHCCC---------HHHHHHHHHcCCCCC-------CccCCCCcHHHHHHHCCcHHHHHHHHHCC
Q 020810 255 KDEEDSEGRTALHFACGYGE---------VKCAQILLEAGANVD-------ALDKNKNTALHYAAGYGRKECVALLLENG 318 (321)
Q Consensus 255 ~~~~d~~g~TpLh~A~~~g~---------~~~v~~Ll~~ga~~~-------~~d~~g~TpLh~A~~~g~~~iv~~Ll~~G 318 (321)
++.+|..|+||||+|+..|+ .+++++|+++|++++ .+|..|+||||+|+..|+.++|++|+++|
T Consensus 177 ~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g 256 (273)
T 2pnn_A 177 ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQRE 256 (273)
T ss_dssp TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred ceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCC
Confidence 99999999999999999998 899999999999997 48999999999999999999999999999
Q ss_pred C
Q 020810 319 A 319 (321)
Q Consensus 319 A 319 (321)
|
T Consensus 257 a 257 (273)
T 2pnn_A 257 I 257 (273)
T ss_dssp T
T ss_pred C
Confidence 8
No 59
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.81 E-value=3e-19 Score=161.54 Aligned_cols=125 Identities=28% Similarity=0.315 Sum_probs=108.4
Q ss_pred CChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 020810 180 GGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEED 259 (321)
Q Consensus 180 g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d 259 (321)
.++.+++...++.++++.|.+. |.+ ++..|..|+||||+|+..|+.++|++|+++|++++..|
T Consensus 74 ~t~L~~A~~~g~~~~v~~Ll~~----------------ga~-~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~ 136 (299)
T 1s70_B 74 LTALHQACIDDNVDMVKFLVEN----------------GAN-INQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVN 136 (299)
T ss_dssp CBHHHHHHHTTCHHHHHHHHHT----------------TCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHC----------------CCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcC
Confidence 3677777777778877777542 222 35668889999999999999999999999999887665
Q ss_pred C------------------------------------------------------------CCCcHHHHHHHCCCHHHHH
Q 020810 260 S------------------------------------------------------------EGRTALHFACGYGEVKCAQ 279 (321)
Q Consensus 260 ~------------------------------------------------------------~g~TpLh~A~~~g~~~~v~ 279 (321)
. .|.||||+|+..|+.++++
T Consensus 137 ~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~ 216 (299)
T 1s70_B 137 SEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLK 216 (299)
T ss_dssp TTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHH
T ss_pred CCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHH
Confidence 3 4678899999999999999
Q ss_pred HHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 280 ILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 280 ~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
+|+++|++++.+|..|+||||+|+..|+.++|++|+++||++
T Consensus 217 ~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~ 258 (299)
T 1s70_B 217 LLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDM 258 (299)
T ss_dssp HHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999999999999985
No 60
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.81 E-value=2e-19 Score=157.71 Aligned_cols=125 Identities=26% Similarity=0.326 Sum_probs=108.0
Q ss_pred CChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCC-----
Q 020810 180 GGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGAD----- 254 (321)
Q Consensus 180 g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~----- 254 (321)
.++.+++...++.++++.|. ..|.+ ++..+..|+||||+|+..|+.+++++|++.|.+
T Consensus 46 ~t~L~~A~~~~~~~~v~~Ll----------------~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~ 108 (236)
T 1ikn_D 46 QTPLHLAVITNQPEIAEALL----------------GAGCD-PELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHS 108 (236)
T ss_dssp CCHHHHHHHTTCHHHHHCCC----------------SCCCC-SCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSC
T ss_pred CCHHHHHHHcCCHHHHHHHH----------------HcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHH
Confidence 35666666667666665553 33333 356788999999999999999999999999876
Q ss_pred -CCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccC-CCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 255 -KDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDK-NKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 255 -~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~-~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
++..+..|+||||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.++|++|+++||++
T Consensus 109 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 177 (236)
T 1ikn_D 109 ILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADV 177 (236)
T ss_dssp GGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCS
T ss_pred HhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 467788999999999999999999999999999999997 9999999999999999999999999985
No 61
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.81 E-value=4.1e-19 Score=151.38 Aligned_cols=109 Identities=29% Similarity=0.329 Sum_probs=90.4
Q ss_pred chhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcC-CCCC
Q 020810 212 TSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNAL-AAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAG-ANVD 289 (321)
Q Consensus 212 ~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll-~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g-a~~~ 289 (321)
..++..+.+ .+..+..|+||||+|+..|+.+++++|+ ..+.+++..|..|+||||+|+..|+.+++++|+++| ++++
T Consensus 56 ~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 134 (201)
T 3hra_A 56 KALIDRGAD-INLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDID 134 (201)
T ss_dssp HHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTT
T ss_pred HHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcC
Confidence 334444444 3566778889999999999999999888 566788888888999999999999999999999888 8888
Q ss_pred CccCCCCcHHHHHHHCCc-----HHHHHHHHHCCCCC
Q 020810 290 ALDKNKNTALHYAAGYGR-----KECVALLLENGAAV 321 (321)
Q Consensus 290 ~~d~~g~TpLh~A~~~g~-----~~iv~~Ll~~GAdv 321 (321)
.+|..|+||||+|+..++ .+++++|+++|+++
T Consensus 135 ~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~ 171 (201)
T 3hra_A 135 FQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQ 171 (201)
T ss_dssp CCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCT
T ss_pred CCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCC
Confidence 888899999999998887 88999999998875
No 62
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.81 E-value=5.6e-20 Score=163.38 Aligned_cols=138 Identities=18% Similarity=0.105 Sum_probs=108.7
Q ss_pred CChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHH---cCCCCC
Q 020810 180 GGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALA---AGADKD 256 (321)
Q Consensus 180 g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~---~g~~~~ 256 (321)
.++.+++...++.++++.|.+.-. ... ....-....+......+..|+||||+|+..|+.++|++|++ +|++++
T Consensus 94 ~t~L~~A~~~g~~~~v~~Ll~~ga-~~~--~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~ 170 (260)
T 3jxi_A 94 QTALHIAIERRCKHYVELLVEKGA-DVH--AQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLR 170 (260)
T ss_dssp BCHHHHHHHTTCHHHHHHHHHTTC-CTT--CCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTT
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCC-CcC--ccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCc
Confidence 468888888888888888875311 000 00000000000001112679999999999999999999999 999999
Q ss_pred CCCCCCCcHHHHHHHCCC---------HHHHHHHHHcCCCC-------CCccCCCCcHHHHHHHCCcHHHHHHHHHCCCC
Q 020810 257 EEDSEGRTALHFACGYGE---------VKCAQILLEAGANV-------DALDKNKNTALHYAAGYGRKECVALLLENGAA 320 (321)
Q Consensus 257 ~~d~~g~TpLh~A~~~g~---------~~~v~~Ll~~ga~~-------~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAd 320 (321)
.+|..|+||||+|+..++ .+++++|+++|+++ +.+|..|+||||+|+..|+.++|++|+++|++
T Consensus 171 ~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~ 250 (260)
T 3jxi_A 171 RQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIA 250 (260)
T ss_dssp CCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCC
Confidence 999999999999998887 79999999999999 67999999999999999999999999998763
No 63
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.81 E-value=3.1e-20 Score=153.07 Aligned_cols=97 Identities=26% Similarity=0.360 Sum_probs=91.3
Q ss_pred hcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCc-HHHHH
Q 020810 224 EVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNT-ALHYA 302 (321)
Q Consensus 224 ~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~T-pLh~A 302 (321)
..+..|.|+||+||..|+.++|++|+++|++++..|..|+||||+|+ .|+.+++++|+++|++++.+|..|+| |||+|
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A 85 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDA 85 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHH
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHH
Confidence 34678999999999999999999999999999999999999999985 99999999999999999999999999 99999
Q ss_pred HHCCcHHHHHHHHHCCCCC
Q 020810 303 AGYGRKECVALLLENGAAV 321 (321)
Q Consensus 303 ~~~g~~~iv~~Ll~~GAdv 321 (321)
+..|+.++|++|+++|+++
T Consensus 86 ~~~~~~~~v~~Ll~~ga~~ 104 (156)
T 1bi7_B 86 AREGFLDTLVVLHRAGARL 104 (156)
T ss_dssp HHHTCHHHHHHHHHHTCCS
T ss_pred HHCCCHHHHHHHHHcCCCC
Confidence 9999999999999999985
No 64
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.81 E-value=3.8e-20 Score=156.68 Aligned_cols=95 Identities=43% Similarity=0.582 Sum_probs=77.6
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCcc-CCCCcHHHHHHH
Q 020810 226 GNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALD-KNKNTALHYAAG 304 (321)
Q Consensus 226 d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d-~~g~TpLh~A~~ 304 (321)
+..|.||||+||..|+.+++++|++ |++++.+|..|+||||+|+..|+.+++++|+++|++++.++ ..|+||||+|+.
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence 4567788888888888888888888 88888888888888888888888888888888888888777 778888888888
Q ss_pred CCcHHHHHHHHHCCCCC
Q 020810 305 YGRKECVALLLENGAAV 321 (321)
Q Consensus 305 ~g~~~iv~~Ll~~GAdv 321 (321)
.|+.+++++|+++|+++
T Consensus 120 ~~~~~~v~~Ll~~ga~~ 136 (183)
T 3deo_A 120 YVRPEVVEALVELGADI 136 (183)
T ss_dssp TTCHHHHHHHHHHTCCT
T ss_pred cCcHHHHHHHHHcCCCC
Confidence 88888888888888764
No 65
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.81 E-value=4.7e-20 Score=162.79 Aligned_cols=96 Identities=28% Similarity=0.355 Sum_probs=91.5
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHC
Q 020810 226 GNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGY 305 (321)
Q Consensus 226 d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~ 305 (321)
+..+.|+||+|+..|+.++|++|++.|++++.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..
T Consensus 34 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~ 113 (239)
T 1ycs_B 34 NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASC 113 (239)
T ss_dssp ---CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHT
T ss_pred CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHCCCCC
Q 020810 306 GRKECVALLLENGAAV 321 (321)
Q Consensus 306 g~~~iv~~Ll~~GAdv 321 (321)
|+.++|++|+++|+++
T Consensus 114 ~~~~~v~~Ll~~ga~~ 129 (239)
T 1ycs_B 114 NNVQVCKFLVESGAAV 129 (239)
T ss_dssp TCHHHHHHHHHTTCCT
T ss_pred CCHHHHHHHHHcCCCc
Confidence 9999999999999985
No 66
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.81 E-value=1.2e-19 Score=169.32 Aligned_cols=124 Identities=16% Similarity=0.142 Sum_probs=110.6
Q ss_pred CChHHHHHHhC--ChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCC---
Q 020810 180 GGPSAMMKYWN--DKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGAD--- 254 (321)
Q Consensus 180 g~~~~~~~~~~--~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~--- 254 (321)
.++.+++...+ +.++++.|.+. +.+ ++..|..|+||||+|+..|+.++|++|+++|++
T Consensus 139 ~t~L~~A~~~g~~~~~~v~~Ll~~----------------ga~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~ 201 (364)
T 3ljn_A 139 QTALHWCVGLGPEYLEMIKILVQL----------------GAS-PTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSS 201 (364)
T ss_dssp CCHHHHHHHSCGGGHHHHHHHHHH----------------TCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSS
T ss_pred CCHHHHHHHcCCchHHHHHHHHHc----------------CCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHhccccccc
Confidence 46677777777 67777777543 333 356688999999999999999999999999998
Q ss_pred --CCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCC
Q 020810 255 --KDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAA 320 (321)
Q Consensus 255 --~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAd 320 (321)
++..|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.++|++|+++|++
T Consensus 202 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 269 (364)
T 3ljn_A 202 LRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDV 269 (364)
T ss_dssp CCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCH
T ss_pred ccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999875
No 67
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.81 E-value=2.1e-19 Score=164.67 Aligned_cols=96 Identities=28% Similarity=0.428 Sum_probs=92.6
Q ss_pred cCCCCchHHHHHHHc---CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHH
Q 020810 225 VGNEDESIVHHTASV---GDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHY 301 (321)
Q Consensus 225 ~d~~g~t~Lh~Aa~~---g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~ 301 (321)
.+..|+||||+|+.. |+.++|++||+.|++++.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+
T Consensus 186 ~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~ 265 (301)
T 2b0o_E 186 AQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDI 265 (301)
T ss_dssp SCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHH
T ss_pred cCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence 578899999999997 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHCCcHHHHHHHHHCCCC
Q 020810 302 AAGYGRKECVALLLENGAA 320 (321)
Q Consensus 302 A~~~g~~~iv~~Ll~~GAd 320 (321)
|+..|+.+++++|+++|++
T Consensus 266 A~~~~~~~iv~~Ll~~ga~ 284 (301)
T 2b0o_E 266 ARKKHHKECEELLEQAQAG 284 (301)
T ss_dssp HHHHTCHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHhcCC
Confidence 9999999999999998764
No 68
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.81 E-value=3e-20 Score=149.52 Aligned_cols=123 Identities=18% Similarity=0.164 Sum_probs=105.7
Q ss_pred CChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 020810 180 GGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEED 259 (321)
Q Consensus 180 g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d 259 (321)
.++.+.+...++.++++.|.+. +.+ ++..|..|+||||+|+..|+.+++++|+++|++++.+|
T Consensus 11 ~t~L~~A~~~~~~~~~~~Ll~~----------------g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~ 73 (137)
T 3c5r_A 11 ETLLHIASIKGDIPSVEYLLQN----------------GSD-PNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTG 73 (137)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHT----------------TCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHc----------------CCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcC
Confidence 4667777777888888777543 222 35668889999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCC
Q 020810 260 SEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGA 319 (321)
Q Consensus 260 ~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GA 319 (321)
..|+||||+|+..++.+++++|+++|++++.+|..|.||||+|+..++.+++++|.+.+.
T Consensus 74 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 74 YQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp GGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 999999999999999999999999999999999999999999999999999998887664
No 69
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.81 E-value=8.1e-20 Score=162.11 Aligned_cols=125 Identities=21% Similarity=0.138 Sum_probs=109.2
Q ss_pred cCChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcC-------------CCCchHHHHHHHcCCHHHH
Q 020810 179 SGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVG-------------NEDESIVHHTASVGDAEGL 245 (321)
Q Consensus 179 ~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d-------------~~g~t~Lh~Aa~~g~~~~v 245 (321)
..++.+++...++.++++.|.+. |.+ ++..+ ..|+||||+|+..|+.++|
T Consensus 90 g~t~L~~A~~~g~~~~v~~Ll~~----------------ga~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v 152 (256)
T 2etb_A 90 GHSALHIAIEKRSLQCVKLLVEN----------------GAD-VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVV 152 (256)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHT----------------TCC-TTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHc----------------CCC-CCcccccccccccccccccCCCCHHHHHHHcCCHHHH
Confidence 34778888888888888888654 222 12222 3499999999999999999
Q ss_pred HHHHH---cCCCCCCCCCCCCcHHHHHHH--CCCHH-------HHHHHHHcCCCC-------CCccCCCCcHHHHHHHCC
Q 020810 246 KNALA---AGADKDEEDSEGRTALHFACG--YGEVK-------CAQILLEAGANV-------DALDKNKNTALHYAAGYG 306 (321)
Q Consensus 246 ~~Ll~---~g~~~~~~d~~g~TpLh~A~~--~g~~~-------~v~~Ll~~ga~~-------~~~d~~g~TpLh~A~~~g 306 (321)
++|++ +|++++.+|..|+||||+|+. .++.+ ++++|+++|+++ +.+|..|+||||+|+..|
T Consensus 153 ~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g 232 (256)
T 2etb_A 153 TYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEG 232 (256)
T ss_dssp HHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTT
T ss_pred HHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhC
Confidence 99999 999999999999999999999 88888 999999999999 899999999999999999
Q ss_pred cHHHHHHHHHCCCC
Q 020810 307 RKECVALLLENGAA 320 (321)
Q Consensus 307 ~~~iv~~Ll~~GAd 320 (321)
+.++|++|+++|++
T Consensus 233 ~~~~v~~Ll~~g~~ 246 (256)
T 2etb_A 233 KIEIFRHILQREFS 246 (256)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhCCCC
Confidence 99999999998763
No 70
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.81 E-value=3e-19 Score=158.55 Aligned_cols=141 Identities=23% Similarity=0.250 Sum_probs=117.8
Q ss_pred ChHHHHHHhCChhHHHHHHHHhcc-----------------ccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHH
Q 020810 181 GPSAMMKYWNDKDVLQKLGEAMGL-----------------AVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAE 243 (321)
Q Consensus 181 ~~~~~~~~~~~~~~~~~l~~~~~~-----------------~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~ 243 (321)
++.+++...++.++++.|.+.-.. ....+.+..++..+....+..+..|.||||+|+..|+.+
T Consensus 59 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 138 (253)
T 1yyh_A 59 TALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEG 138 (253)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSS
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHH
Confidence 556666666666666666654110 001123344555666566788899999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 244 GLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 244 ~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++||++
T Consensus 139 ~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 216 (253)
T 1yyh_A 139 MLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANR 216 (253)
T ss_dssp HHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999985
No 71
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.81 E-value=5.9e-20 Score=159.87 Aligned_cols=124 Identities=16% Similarity=0.159 Sum_probs=105.1
Q ss_pred CChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHc-CCCCCCC
Q 020810 180 GGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAA-GADKDEE 258 (321)
Q Consensus 180 g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~-g~~~~~~ 258 (321)
.++.+++...++.++++.|.+. +.+ ++.+|..|+||||+||..|+.++|++|++. |++++.+
T Consensus 74 ~t~L~~A~~~g~~~~v~~Ll~~----------------g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~ 136 (222)
T 3ehr_A 74 DNPLHEAAKRGNLSWLRECLDN----------------RVG-VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQ 136 (222)
T ss_dssp SCHHHHHHHHTCHHHHHHHHHT----------------TCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCC
T ss_pred ccccccccccCcHHHHHHHHhC----------------CCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCcccc
Confidence 4677888888888888877542 222 456688899999999999999999999998 9999999
Q ss_pred CCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCC
Q 020810 259 DSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAA 320 (321)
Q Consensus 259 d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAd 320 (321)
|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.++++.|+..|++
T Consensus 137 d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~ 198 (222)
T 3ehr_A 137 NKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAV 198 (222)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC--------
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchh
Confidence 99999999999999999999999999999999999999999999999999999999999875
No 72
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.80 E-value=5.4e-19 Score=157.74 Aligned_cols=99 Identities=26% Similarity=0.365 Sum_probs=81.3
Q ss_pred hhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHH
Q 020810 222 AEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHY 301 (321)
Q Consensus 222 ~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~ 301 (321)
++..+..|+||||+|+..|+.+++++|+++|++++. +..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+
T Consensus 62 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 140 (261)
T 2xai_A 62 VNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYL 140 (261)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHH
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHH
Confidence 355677788888888888888888888888888775 3458888888888888888888888888888888888888888
Q ss_pred HHHCCcHHHHHHHHHCCCCC
Q 020810 302 AAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 302 A~~~g~~~iv~~Ll~~GAdv 321 (321)
|+..|+.+++++|+++|+++
T Consensus 141 A~~~~~~~~v~~Ll~~g~~~ 160 (261)
T 2xai_A 141 ACENQQRACVKKLLESGADV 160 (261)
T ss_dssp HHHTTCHHHHHHHHHHTCCT
T ss_pred HHHhCCHHHHHHHHHcCCCC
Confidence 88888888888888888875
No 73
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.80 E-value=1.2e-19 Score=161.08 Aligned_cols=136 Identities=20% Similarity=0.092 Sum_probs=109.9
Q ss_pred CChHHHHHHh---CChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCC
Q 020810 180 GGPSAMMKYW---NDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKD 256 (321)
Q Consensus 180 g~~~~~~~~~---~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~ 256 (321)
.++.+++... ++.++++.|.+.-..... ...++... ....|..|.||||+||..|+.++|++|+++|++++
T Consensus 44 ~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~---~~~~~~~~---~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~ 117 (256)
T 2etb_A 44 KTCLMKAVLNLQDGVNACIMPLLQIDKDSGN---PKPLVNAQ---CTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVH 117 (256)
T ss_dssp BCHHHHHHHTCBTTBCTTHHHHHHHHHHTTC---SSCGGGCC---CCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CCHHHHHHHccccchHHHHHHHHhcCCcccc---hhhhcccc---cccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 3677777777 777888887754221110 00011110 12235779999999999999999999999999999
Q ss_pred CCCCC-------------CCcHHHHHHHCCCHHHHHHHHH---cCCCCCCccCCCCcHHHHHHH--CCcHH-------HH
Q 020810 257 EEDSE-------------GRTALHFACGYGEVKCAQILLE---AGANVDALDKNKNTALHYAAG--YGRKE-------CV 311 (321)
Q Consensus 257 ~~d~~-------------g~TpLh~A~~~g~~~~v~~Ll~---~ga~~~~~d~~g~TpLh~A~~--~g~~~-------iv 311 (321)
..+.. |+||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+. .++.+ ++
T Consensus 118 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv 197 (256)
T 2etb_A 118 LRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMY 197 (256)
T ss_dssp CCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHH
T ss_pred cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHH
Confidence 99876 9999999999999999999999 999999999999999999999 88888 99
Q ss_pred HHHHHCCCCC
Q 020810 312 ALLLENGAAV 321 (321)
Q Consensus 312 ~~Ll~~GAdv 321 (321)
++|+++|+++
T Consensus 198 ~~Ll~~ga~~ 207 (256)
T 2etb_A 198 DGLLQMGARL 207 (256)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHcCCCc
Confidence 9999998763
No 74
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.80 E-value=4.9e-19 Score=163.48 Aligned_cols=135 Identities=23% Similarity=0.208 Sum_probs=111.3
Q ss_pred ChHHHHHHhCChhHHHHHHHHhccccC-------------------C---cccchhhhcCCchhhhcCCCCchHHHHHHH
Q 020810 181 GPSAMMKYWNDKDVLQKLGEAMGLAVG-------------------G---DATTSADNAGADEAEEVGNEDESIVHHTAS 238 (321)
Q Consensus 181 ~~~~~~~~~~~~~~~~~l~~~~~~~~~-------------------~---d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~ 238 (321)
++.+++...++.++++.|+...+..+. . ..+..++..|.+ ++.++..|+||||+|+.
T Consensus 170 T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad-~n~~d~~g~t~L~~a~~ 248 (337)
T 4g8k_A 170 TALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD-VNVRGERGKTPLILAVE 248 (337)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCC-TTCCCGGGCCHHHHHHH
T ss_pred cHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHH
Confidence 577777778888888888765332110 0 122334455555 46678899999999999
Q ss_pred cCCHHHHHHHHHc-CCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHC
Q 020810 239 VGDAEGLKNALAA-GADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLEN 317 (321)
Q Consensus 239 ~g~~~~v~~Ll~~-g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~ 317 (321)
.|+.+++++|+.. |++++.+|..|+||||+|+..|+.++|++|+++|++++.+ ||||+|+..|+.++|++||++
T Consensus 249 ~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~-----~~L~~A~~~~~~~iv~~Ll~~ 323 (337)
T 4g8k_A 249 KKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG-----DLVMTARRNYDHSLVKVLLSH 323 (337)
T ss_dssp TTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTC-----CHHHHHHHTTCHHHHHHHHHT
T ss_pred hhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-----CHHHHHHHcCCHHHHHHHHHC
Confidence 9999999999975 8999999999999999999999999999999999998764 599999999999999999999
Q ss_pred CCCC
Q 020810 318 GAAV 321 (321)
Q Consensus 318 GAdv 321 (321)
||+|
T Consensus 324 GA~~ 327 (337)
T 4g8k_A 324 GAKE 327 (337)
T ss_dssp TCCC
T ss_pred cCCC
Confidence 9986
No 75
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.80 E-value=5.7e-19 Score=157.53 Aligned_cols=124 Identities=27% Similarity=0.288 Sum_probs=108.2
Q ss_pred hHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Q 020810 182 PSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSE 261 (321)
Q Consensus 182 ~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~ 261 (321)
+...+...++.++++.|.+ .+.+.....+..|+||||+|+..|+.+++++|++.|++++..|..
T Consensus 8 ~L~~A~~~g~~~~v~~Ll~----------------~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~ 71 (285)
T 1wdy_A 8 LLIKAVQNEDVDLVQQLLE----------------GGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKN 71 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHH----------------TTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred HHHHHHHcCCHHHHHHHHH----------------cCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCC
Confidence 3444555566666666643 344443444778999999999999999999999999999999999
Q ss_pred CCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 262 GRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 262 g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
|+||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|+++
T Consensus 72 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~ 131 (285)
T 1wdy_A 72 GATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANV 131 (285)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCc
Confidence 999999999999999999999999999999999999999999999999999999999874
No 76
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.80 E-value=1.5e-19 Score=142.78 Aligned_cols=108 Identities=24% Similarity=0.227 Sum_probs=92.3
Q ss_pred hHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Q 020810 182 PSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSE 261 (321)
Q Consensus 182 ~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~ 261 (321)
+.+.+...++.++++.|.+ .+.+ ++..+..|+||||+||..|+.+++++|+++|++++.+|..
T Consensus 10 ~l~~A~~~~~~~~v~~ll~----------------~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~ 72 (123)
T 3aaa_C 10 EFMWALKNGDLDEVKDYVA----------------KGED-VNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKH 72 (123)
T ss_dssp HHHHHHHTTCHHHHHHHHH----------------TTCC-TTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTT
T ss_pred HHHHHHHcCCHHHHHHHHH----------------cCCC-cCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCC
Confidence 4455555666666666643 2332 4667888999999999999999999999999999999999
Q ss_pred CCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCC
Q 020810 262 GRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYG 306 (321)
Q Consensus 262 g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g 306 (321)
|+||||+|+..++.+++++|+++|++++.+|..|+||||+|...+
T Consensus 73 g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~ 117 (123)
T 3aaa_C 73 HITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQA 117 (123)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHH
Confidence 999999999999999999999999999999999999999995433
No 77
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.80 E-value=8.7e-19 Score=156.31 Aligned_cols=125 Identities=24% Similarity=0.241 Sum_probs=112.1
Q ss_pred ChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCC----HHHHHHHHHcCCCCC
Q 020810 181 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGD----AEGLKNALAAGADKD 256 (321)
Q Consensus 181 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~----~~~v~~Ll~~g~~~~ 256 (321)
.+.+.+...++.++++.|.+..+ ...+..+..|+||||+|+..++ .+++++|+++|++++
T Consensus 150 t~L~~A~~~~~~~~v~~Ll~~~~----------------~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~ 213 (285)
T 1wdy_A 150 TALMDAAEKGHVEVLKILLDEMG----------------ADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVN 213 (285)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTSC----------------CCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSS
T ss_pred cHHHHHHHcCCHHHHHHHHHhcC----------------CCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCC
Confidence 66777777777888777764322 2245668889999999999999 999999999999999
Q ss_pred CCCCCCCcHHHHHHHCCCHHHHHHHHH-cCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 257 EEDSEGRTALHFACGYGEVKCAQILLE-AGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 257 ~~d~~g~TpLh~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..|+.+++++|+++||++
T Consensus 214 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~ 279 (285)
T 1wdy_A 214 VRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAST 279 (285)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCS
T ss_pred CcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC
Confidence 999999999999999999999999999 89999999999999999999999999999999999986
No 78
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.80 E-value=1.5e-19 Score=160.52 Aligned_cols=136 Identities=17% Similarity=0.085 Sum_probs=108.8
Q ss_pred cCChHHHHH---HhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCC
Q 020810 179 SGGPSAMMK---YWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADK 255 (321)
Q Consensus 179 ~g~~~~~~~---~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~ 255 (321)
..++.+++. ..++.++++.|.+....... ...++. ......|..|+||||+||..|+.++|++|+++|+++
T Consensus 46 g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~---~~~~~~---~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~ 119 (260)
T 3jxi_A 46 GKTCLPKALLNLSAGRNDTIPILLDIAEKTGN---MREFIN---SPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADV 119 (260)
T ss_dssp CCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTC---HHHHHT---CCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CCcHHHHHHHHhhcCCHHHHHHHHHhcccccc---hHhhhc---ccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCc
Confidence 346666666 34777888887755211000 000010 112334568999999999999999999999999999
Q ss_pred CCCC--------------CCCCcHHHHHHHCCCHHHHHHHHH---cCCCCCCccCCCCcHHHHHHHCCc---------HH
Q 020810 256 DEED--------------SEGRTALHFACGYGEVKCAQILLE---AGANVDALDKNKNTALHYAAGYGR---------KE 309 (321)
Q Consensus 256 ~~~d--------------~~g~TpLh~A~~~g~~~~v~~Ll~---~ga~~~~~d~~g~TpLh~A~~~g~---------~~ 309 (321)
+..+ ..|+||||+|+..|+.++|++|++ +|++++.+|..|+||||+|+..|+ .+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~ 199 (260)
T 3jxi_A 120 HAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTK 199 (260)
T ss_dssp TCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHH
T ss_pred CccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHH
Confidence 9998 689999999999999999999999 999999999999999999998887 79
Q ss_pred HHHHHHHCCCC
Q 020810 310 CVALLLENGAA 320 (321)
Q Consensus 310 iv~~Ll~~GAd 320 (321)
++++|+++|++
T Consensus 200 ~v~~Ll~~ga~ 210 (260)
T 3jxi_A 200 MYDLLLIKCAK 210 (260)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHhCcc
Confidence 99999999875
No 79
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.80 E-value=2.2e-19 Score=160.91 Aligned_cols=135 Identities=18% Similarity=0.133 Sum_probs=109.4
Q ss_pred CChHHHHHHh---CChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCC
Q 020810 180 GGPSAMMKYW---NDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKD 256 (321)
Q Consensus 180 g~~~~~~~~~---~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~ 256 (321)
.++.+++... ++.++++.|.+.-... ......+... ....|..|+||||+||..|+.++|++|+++|++++
T Consensus 55 ~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~---~~~~~~i~~~---~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~ 128 (273)
T 2pnn_A 55 KTCLLKAMLNLHNGQNDTIALLLDVARKT---DSLKQFVNAS---YTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQ 128 (273)
T ss_dssp CCHHHHHHHSCBTTBCHHHHHHHHHHHHT---TCHHHHHTCC---CCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CCHHHHHHHHHhcCChHHHHHHHHhhccc---cchhHHhhcc---cccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC
Confidence 4667777665 7778888877652110 0001111111 12246789999999999999999999999999999
Q ss_pred CCCC--------------CCCcHHHHHHHCCCHHHHHHHHH---cCCCCCCccCCCCcHHHHHHHCCc---------HHH
Q 020810 257 EEDS--------------EGRTALHFACGYGEVKCAQILLE---AGANVDALDKNKNTALHYAAGYGR---------KEC 310 (321)
Q Consensus 257 ~~d~--------------~g~TpLh~A~~~g~~~~v~~Ll~---~ga~~~~~d~~g~TpLh~A~~~g~---------~~i 310 (321)
..+. .|+||||+|+..|+.++|++|++ +|++++.+|..|+||||+|+..|+ .++
T Consensus 129 ~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~ 208 (273)
T 2pnn_A 129 AAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSM 208 (273)
T ss_dssp CCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHH
T ss_pred ccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHH
Confidence 9987 79999999999999999999999 999999999999999999999988 899
Q ss_pred HHHHHHCCCC
Q 020810 311 VALLLENGAA 320 (321)
Q Consensus 311 v~~Ll~~GAd 320 (321)
+++|+++|++
T Consensus 209 v~~Ll~~ga~ 218 (273)
T 2pnn_A 209 YNEILILGAK 218 (273)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHhhhh
Confidence 9999998875
No 80
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.80 E-value=8.3e-19 Score=156.55 Aligned_cols=123 Identities=28% Similarity=0.342 Sum_probs=106.4
Q ss_pred CChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 020810 180 GGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEED 259 (321)
Q Consensus 180 g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d 259 (321)
.++.+.+...++.++++.|.+. +.+.. .+..|.||||+|+..|+.+++++|++.|++++..|
T Consensus 70 ~t~L~~A~~~~~~~~v~~Ll~~----------------g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 131 (261)
T 2xai_A 70 HTPLFNACVSGSWDCVNLLLQH----------------GASVQ--PESDLASPIHEAARRGHVECVNSLIAYGGNIDHKI 131 (261)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHT----------------TCCSS--CSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCB
T ss_pred CCHHHHHHHcCCHHHHHHHHHC----------------CCCCC--CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCC
Confidence 3566777777777777776543 22221 24558999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 260 SEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 260 ~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
..|+||||+|+..|+.+++++|+++|++++. +..|+||||+|+..|+.++|++|+++|||+
T Consensus 132 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~ 192 (261)
T 2xai_A 132 SHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADT 192 (261)
T ss_dssp TTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred CCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999999999999999996 889999999999999999999999999985
No 81
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.80 E-value=7.2e-20 Score=156.24 Aligned_cols=107 Identities=18% Similarity=0.143 Sum_probs=91.4
Q ss_pred ccchhhhcCCchhhhcCCCCchHHHHHHHcCC------HHHHHHHHHcCCCCCCCCCCCC-cHHHHHHHCCC-----HHH
Q 020810 210 ATTSADNAGADEAEEVGNEDESIVHHTASVGD------AEGLKNALAAGADKDEEDSEGR-TALHFACGYGE-----VKC 277 (321)
Q Consensus 210 ~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~------~~~v~~Ll~~g~~~~~~d~~g~-TpLh~A~~~g~-----~~~ 277 (321)
.+..++..|++ ++.+|..|+||||+|+..|+ .+++++||++|++++.+|..|+ ||||+|+..+. .++
T Consensus 57 iv~~Ll~~Gad-vn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~i 135 (186)
T 3t8k_A 57 ISMFLINKGAD-IKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPL 135 (186)
T ss_dssp HHHHHHHTTCC-SSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHH
T ss_pred HHHHHHHCCCC-CCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHH
Confidence 34556666666 46778889999999999887 5789999999999999999999 99999998543 568
Q ss_pred HHHHHH-cCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHC
Q 020810 278 AQILLE-AGANVDALDKNKNTALHYAAGYGRKECVALLLEN 317 (321)
Q Consensus 278 v~~Ll~-~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~ 317 (321)
+++|++ +|++++.+|..|+||||+|+..|+.++|++|+++
T Consensus 136 v~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~ 176 (186)
T 3t8k_A 136 YKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDY 176 (186)
T ss_dssp HHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHH
Confidence 999999 8999999999999999999999999999999865
No 82
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.80 E-value=3.4e-19 Score=166.29 Aligned_cols=140 Identities=18% Similarity=0.223 Sum_probs=110.6
Q ss_pred ChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcC-----CchhhhcCCCCchHHHHHHHcC--CHHHHHHHHHcCC
Q 020810 181 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAG-----ADEAEEVGNEDESIVHHTASVG--DAEGLKNALAAGA 253 (321)
Q Consensus 181 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~-----~~~~~~~d~~g~t~Lh~Aa~~g--~~~~v~~Ll~~g~ 253 (321)
++.+++...++.++++.|.+..... +.+......... ....+..+..|.||||+|+..| +.++|++|+++|+
T Consensus 86 t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga 164 (364)
T 3ljn_A 86 KPIHLAVMANKTDLVVALVEGAKER-GQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGA 164 (364)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHHHH-TCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTC
T ss_pred CHHHHHHHcCCHHHHHHHHHhcccc-CCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCC
Confidence 5666666667777777766542100 000000000000 0011236778999999999999 9999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCC-----CCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 254 DKDEEDSEGRTALHFACGYGEVKCAQILLEAGAN-----VDALDKNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 254 ~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~-----~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
+++..|..|+||||+|+..|+.++|++|+++|++ ++..|..|+||||+|+..|+.++|++|+++||++
T Consensus 165 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~ 237 (364)
T 3ljn_A 165 SPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDV 237 (364)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCT
T ss_pred CCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999999999999999999999 9999999999999999999999999999999986
No 83
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.79 E-value=8e-19 Score=167.58 Aligned_cols=107 Identities=30% Similarity=0.349 Sum_probs=96.5
Q ss_pred hhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccC
Q 020810 214 ADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDK 293 (321)
Q Consensus 214 ~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~ 293 (321)
++..+.+ .+..+..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.+|+.++|++|+++|++++.+|.
T Consensus 264 Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~ 342 (437)
T 1n11_A 264 LLSKQAN-GNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTK 342 (437)
T ss_dssp HHTTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCT
T ss_pred HHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCC
Confidence 3344443 356678899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 294 NKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 294 ~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
.|+||||+|+..|+.++|++|+++||++
T Consensus 343 ~g~t~L~~A~~~g~~~iv~~Ll~~ga~~ 370 (437)
T 1n11_A 343 LGYSPLHQAAQQGHTDIVTLLLKNGASP 370 (437)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCS
T ss_pred CCCCHHHHHHHCChHHHHHHHHHCcCCC
Confidence 9999999999999999999999999985
No 84
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.79 E-value=4.2e-19 Score=160.92 Aligned_cols=122 Identities=22% Similarity=0.233 Sum_probs=87.4
Q ss_pred CChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 020810 180 GGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEED 259 (321)
Q Consensus 180 g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d 259 (321)
.++.+.+...++.++++.|.+. +.+. +.. +|+||||+||..|+.++|++|+++|++++.+|
T Consensus 32 ~t~L~~A~~~g~~~~v~~Ll~~----------------g~~~-~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d 92 (285)
T 3kea_A 32 HSASYYAIADNNVRLVCTLLNA----------------GALK-NLL--ENEFPLHQAATLEDTKIVKILLFSGLDDSQFD 92 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHT----------------TGGG-SCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCC
T ss_pred CCHHHHHHHcCCHHHHHHHHhC----------------CCCC-CCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC
Confidence 4677777777788887777643 2221 111 36777777777777777777777777777777
Q ss_pred CCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCC-CcHHHHHHHCCcHHHHHHHHHCCCC
Q 020810 260 SEGRTALHFACGYGEVKCAQILLEAGANVDALDKNK-NTALHYAAGYGRKECVALLLENGAA 320 (321)
Q Consensus 260 ~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g-~TpLh~A~~~g~~~iv~~Ll~~GAd 320 (321)
..|+||||+|+..|+.+++++|+++|++++.++..| .||||+|+..|+.+++++|+++|++
T Consensus 93 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~ 154 (285)
T 3kea_A 93 DKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPS 154 (285)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCT
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCc
Confidence 777777777777777777777777777777777777 5777777777777777777777765
No 85
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.79 E-value=1.2e-18 Score=157.54 Aligned_cols=123 Identities=28% Similarity=0.346 Sum_probs=104.6
Q ss_pred hHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Q 020810 182 PSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSE 261 (321)
Q Consensus 182 ~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~ 261 (321)
+...+...++.++++.|.+. +.+ ++..+..|+||||+||..|+.++|++|+++|++++..|..
T Consensus 43 ~l~~A~~~g~~~~v~~Ll~~----------------g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~ 105 (299)
T 1s70_B 43 VFLAACSSGDTEEVLRLLER----------------GAD-INYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNE 105 (299)
T ss_dssp HHHHHHHHTCHHHHHHHHHH----------------CCC-TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred HHHHHHHcCCHHHHHHHHHc----------------CCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC
Confidence 44555556677777766533 332 4567888999999999999999999999999999999999
Q ss_pred CCcHHHHHHHCCCHHHHHHHHHcCCCCCCccC------------------------------------------------
Q 020810 262 GRTALHFACGYGEVKCAQILLEAGANVDALDK------------------------------------------------ 293 (321)
Q Consensus 262 g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~------------------------------------------------ 293 (321)
|+||||+|+..|+.++|++|+++|++++..|.
T Consensus 106 g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l 185 (299)
T 1s70_B 106 GWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWL 185 (299)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHH
Confidence 99999999999999999999999999877654
Q ss_pred ------------CCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 294 ------------NKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 294 ------------~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
.|.||||+|+..|+.++|++|+++|+++
T Consensus 186 ~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~ 225 (299)
T 1s70_B 186 NSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDV 225 (299)
T ss_dssp HHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCT
T ss_pred hccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCC
Confidence 4678888999999999999999999875
No 86
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.79 E-value=2e-19 Score=159.46 Aligned_cols=95 Identities=43% Similarity=0.582 Sum_probs=84.1
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCcc-CCCCcHHHHHHH
Q 020810 226 GNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALD-KNKNTALHYAAG 304 (321)
Q Consensus 226 d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d-~~g~TpLh~A~~ 304 (321)
+..|.||||+||..|+.++|++|++ |++++.+|..|+||||+|+..|+.++|++|+++|++++.++ ..|+||||+|+.
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~ 120 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 120 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHH
Confidence 3467899999999999999999998 88899899999999999999999999999999999998888 779999999999
Q ss_pred CCcHHHHHHHHHCCCCC
Q 020810 305 YGRKECVALLLENGAAV 321 (321)
Q Consensus 305 ~g~~~iv~~Ll~~GAdv 321 (321)
.|+.++|++|+++|+++
T Consensus 121 ~g~~~~v~~Ll~~ga~~ 137 (244)
T 3ui2_A 121 YVRPEVVEALVELGADI 137 (244)
T ss_dssp TTCHHHHHHHHHTTCCT
T ss_pred cCCHHHHHHHHHCCCCC
Confidence 99999999999998875
No 87
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.79 E-value=1.6e-18 Score=151.49 Aligned_cols=108 Identities=31% Similarity=0.388 Sum_probs=83.3
Q ss_pred hhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCC----CCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCC
Q 020810 213 SADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGA----DKDEEDSEGRTALHFACGYGEVKCAQILLEAGANV 288 (321)
Q Consensus 213 ~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~----~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~ 288 (321)
.++..+.+ .+..+..|+||||+|+..|+.+++++|++.+. +++..|..|+||||+|+..++.+++++|+++|+++
T Consensus 64 ~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~ 142 (241)
T 1k1a_A 64 LLVTAGAS-PMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADI 142 (241)
T ss_dssp HHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 33444444 34556778888888888888888888887776 67777788888888888888888888888888888
Q ss_pred CCcc-CCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 289 DALD-KNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 289 ~~~d-~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
+..+ ..|.||||+|+..|+.+++++|+++|+++
T Consensus 143 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 176 (241)
T 1k1a_A 143 DAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANV 176 (241)
T ss_dssp TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred ccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 8777 67888888888888888888888888775
No 88
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.79 E-value=2e-18 Score=150.92 Aligned_cols=100 Identities=26% Similarity=0.410 Sum_probs=87.0
Q ss_pred hhhcCCCCchHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHH
Q 020810 222 AEEVGNEDESIVHHTASVGDAEGLKNALAAG-ADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALH 300 (321)
Q Consensus 222 ~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g-~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh 300 (321)
.+..+..|.||||+|+..|+.+++++|++.| .+++..+..|+||||+|+..++.+++++|+++|++++.+|..|.||||
T Consensus 70 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~ 149 (237)
T 3b7b_A 70 VDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLH 149 (237)
T ss_dssp CCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHH
Confidence 3556778888999999889999999998887 788888888899999999999999999999999988888888999999
Q ss_pred HHHHCCcHHHHHHHHHCCCCC
Q 020810 301 YAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 301 ~A~~~g~~~iv~~Ll~~GAdv 321 (321)
+|+..|+.+++++|+++|+++
T Consensus 150 ~A~~~~~~~~~~~Ll~~g~~~ 170 (237)
T 3b7b_A 150 WAAFSGCVDIAEILLAAKCDL 170 (237)
T ss_dssp HHHHHCCHHHHHHHHTTTCCT
T ss_pred HHHHCCCHHHHHHHHHcCCCC
Confidence 999999999999999888875
No 89
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.79 E-value=1.4e-19 Score=154.47 Aligned_cols=95 Identities=20% Similarity=0.191 Sum_probs=88.4
Q ss_pred CCCchHHHHHHHcCC----HHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCC------HHHHHHHHHcCCCCCCccCCCC
Q 020810 227 NEDESIVHHTASVGD----AEGLKNALAAGADKDEEDSEGRTALHFACGYGE------VKCAQILLEAGANVDALDKNKN 296 (321)
Q Consensus 227 ~~g~t~Lh~Aa~~g~----~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~------~~~v~~Ll~~ga~~~~~d~~g~ 296 (321)
..|+||||+|+..|+ .+++++||++|++++.+|..|+||||+|+..++ .+++++|+++|++++.+|..|+
T Consensus 36 ~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ 115 (186)
T 3t8k_A 36 VLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYK 115 (186)
T ss_dssp HHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGT
T ss_pred cCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcC
Confidence 569999999999985 999999999999999999999999999999987 6889999999999999999999
Q ss_pred -cHHHHHHHCC-----cHHHHHHHHH-CCCCC
Q 020810 297 -TALHYAAGYG-----RKECVALLLE-NGAAV 321 (321)
Q Consensus 297 -TpLh~A~~~g-----~~~iv~~Ll~-~GAdv 321 (321)
||||+|+..+ +.+++++|++ +|||+
T Consensus 116 ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~ 147 (186)
T 3t8k_A 116 IVVFKNIFNYFVDENEMIPLYKLIFSQSGLQL 147 (186)
T ss_dssp BCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCT
T ss_pred chHHHHHHHcCCChhhHHHHHHHHHHhcCCCC
Confidence 9999999954 4679999999 99986
No 90
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.78 E-value=1.4e-18 Score=146.88 Aligned_cols=119 Identities=28% Similarity=0.379 Sum_probs=100.7
Q ss_pred ChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC-
Q 020810 181 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEED- 259 (321)
Q Consensus 181 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d- 259 (321)
++.+.+...++.++++.|.+ +. .++..|..|+||||+|+..|+.+++++|+++|++++.+|
T Consensus 46 t~L~~A~~~g~~~~v~~Ll~-----------------~~-~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 107 (183)
T 3deo_A 46 TPWWTAARKADEQALSQLLE-----------------DR-DVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDM 107 (183)
T ss_dssp HHHHHHHHTTCHHHHHHHTT-----------------TS-CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCS
T ss_pred CHHHHHHHcCCHHHHHHHHh-----------------cC-CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCC
Confidence 45555666666666666632 22 246678899999999999999999999999999999998
Q ss_pred CCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHC----------------CcHHHHHHHHHC
Q 020810 260 SEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGY----------------GRKECVALLLEN 317 (321)
Q Consensus 260 ~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~----------------g~~~iv~~Ll~~ 317 (321)
..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.. |+.+++++|.++
T Consensus 108 ~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 108 RGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp SSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccCcccccHHHHHHHcCHHHHHHHHHHh
Confidence 8999999999999999999999999999999999999999999875 567778877654
No 91
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.78 E-value=9e-19 Score=158.67 Aligned_cols=98 Identities=32% Similarity=0.439 Sum_probs=64.0
Q ss_pred hhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHH
Q 020810 223 EEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYA 302 (321)
Q Consensus 223 ~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A 302 (321)
...+..|+||||+||..|+.++|++|++.|++++.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|
T Consensus 53 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A 132 (285)
T 3d9h_A 53 MGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNA 132 (285)
T ss_dssp CSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHH
T ss_pred cCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 34456666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred HHCCcHHHHHHHHHCCCC
Q 020810 303 AGYGRKECVALLLENGAA 320 (321)
Q Consensus 303 ~~~g~~~iv~~Ll~~GAd 320 (321)
+..|+.++|++|+++|++
T Consensus 133 ~~~~~~~~v~~Ll~~g~~ 150 (285)
T 3d9h_A 133 CVSGSWDCVNLLLQHGAS 150 (285)
T ss_dssp HHHTCHHHHHHHHHTTCC
T ss_pred HHcCHHHHHHHHHHCCCC
Confidence 666666666666666655
No 92
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.78 E-value=2.2e-18 Score=156.03 Aligned_cols=99 Identities=26% Similarity=0.362 Sum_probs=80.1
Q ss_pred hhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHH
Q 020810 222 AEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHY 301 (321)
Q Consensus 222 ~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~ 301 (321)
.+..+..|+||||+|+..|+.+++++|++.|++++..+ .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+
T Consensus 118 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~ 196 (285)
T 3d9h_A 118 VNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYL 196 (285)
T ss_dssp SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHH
T ss_pred CCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHH
Confidence 35567778888888888888888888888887776543 48888888888888888888888888888888888888888
Q ss_pred HHHCCcHHHHHHHHHCCCCC
Q 020810 302 AAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 302 A~~~g~~~iv~~Ll~~GAdv 321 (321)
|+..|+.++|++|+++|+++
T Consensus 197 A~~~~~~~~v~~Ll~~ga~~ 216 (285)
T 3d9h_A 197 ACENQQRACVKKLLESGADV 216 (285)
T ss_dssp HHHTTCHHHHHHHHHTTCCT
T ss_pred HHHcCcHHHHHHHHHCCCCC
Confidence 88888888888888888875
No 93
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.78 E-value=7.6e-19 Score=155.78 Aligned_cols=120 Identities=27% Similarity=0.358 Sum_probs=102.7
Q ss_pred ChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC-
Q 020810 181 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEED- 259 (321)
Q Consensus 181 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d- 259 (321)
++.+.+...++.++++.|. . +. .++..|..|+||||+||..|+.++|++|+++|++++.++
T Consensus 47 t~L~~A~~~g~~~~v~~Ll----------------~-~~-~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~ 108 (244)
T 3ui2_A 47 TPWWTAARKADEQALSQLL----------------E-DR-DVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDM 108 (244)
T ss_dssp HHHHHHHTTTCHHHHHHTT----------------T-TC-CTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCS
T ss_pred CHHHHHHHcCCHHHHHHHH----------------c-CC-CCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCC
Confidence 4555555566666665553 2 22 346678899999999999999999999999999999998
Q ss_pred CCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHH----------------HCCcHHHHHHHHHCC
Q 020810 260 SEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAA----------------GYGRKECVALLLENG 318 (321)
Q Consensus 260 ~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~----------------~~g~~~iv~~Ll~~G 318 (321)
..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+ ..|+.+++++|++++
T Consensus 109 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~ 183 (244)
T 3ui2_A 109 RGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQV 183 (244)
T ss_dssp SSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHhc
Confidence 88999999999999999999999999999999999999999988 668899999999753
No 94
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.77 E-value=4.3e-19 Score=160.84 Aligned_cols=98 Identities=24% Similarity=0.249 Sum_probs=93.7
Q ss_pred hhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHH
Q 020810 222 AEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHY 301 (321)
Q Consensus 222 ~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~ 301 (321)
++.+|..|+||||+|+..|+.++|++|++.|++++..| |+||||+|+..|+.+++++|+++|++++.+|..|+||||+
T Consensus 24 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~ 101 (285)
T 3kea_A 24 TFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYY 101 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT--TCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHH
Confidence 46778999999999999999999999999999999884 8999999999999999999999999999999999999999
Q ss_pred HHHCCcHHHHHHHHHCCCCC
Q 020810 302 AAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 302 A~~~g~~~iv~~Ll~~GAdv 321 (321)
|+..|+.++|++|+++|+++
T Consensus 102 A~~~g~~~~v~~Ll~~ga~~ 121 (285)
T 3kea_A 102 AVDSGNMQTVKLFVKKNWRL 121 (285)
T ss_dssp HHHTTCHHHHHHHHHHCGGG
T ss_pred HHHcCCHHHHHHHHhcCCCC
Confidence 99999999999999999874
No 95
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.77 E-value=1.1e-18 Score=164.07 Aligned_cols=97 Identities=22% Similarity=0.347 Sum_probs=91.2
Q ss_pred hcCCCCchHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHH
Q 020810 224 EVGNEDESIVHHTASVGDAEGLKNALAAG-ADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYA 302 (321)
Q Consensus 224 ~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g-~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A 302 (321)
..+..|+||||+||..|+.++|++|++.+ ++++.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|
T Consensus 274 ~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A 353 (373)
T 2fo1_E 274 SEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLA 353 (373)
T ss_dssp SSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHH
T ss_pred cccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHH
Confidence 35678999999999999999999999876 99999999999999999999999999999999999999999999999999
Q ss_pred HHCCcHHHHHHHHHCCCC
Q 020810 303 AGYGRKECVALLLENGAA 320 (321)
Q Consensus 303 ~~~g~~~iv~~Ll~~GAd 320 (321)
+.+|+.++|++|+++|++
T Consensus 354 ~~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 354 QANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp HHTTCHHHHHHHHTTC--
T ss_pred HHcCCHHHHHHHHhcCcc
Confidence 999999999999999986
No 96
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.77 E-value=6e-19 Score=159.25 Aligned_cols=113 Identities=26% Similarity=0.317 Sum_probs=98.2
Q ss_pred cccchhhhcCCchhhhcCCCCchHHHHHH-----HcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHH
Q 020810 209 DATTSADNAGADEAEEVGNEDESIVHHTA-----SVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLE 283 (321)
Q Consensus 209 d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa-----~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~ 283 (321)
+.+..++..+...++..+..|+||||+|+ ..++.+++++|++.|.+++..+..|+||||+|+..|+.++|++|++
T Consensus 125 ~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~ 204 (276)
T 4hbd_A 125 PVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLA 204 (276)
T ss_dssp HHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 45566666776566777777888888887 5577788888888887777888889999999999999999999999
Q ss_pred cCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHH-CCCCC
Q 020810 284 AGANVDALDKNKNTALHYAAGYGRKECVALLLE-NGAAV 321 (321)
Q Consensus 284 ~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~-~GAdv 321 (321)
+|++++.+|..|+||||+|+..|+.++|++|++ .|+++
T Consensus 205 ~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~ 243 (276)
T 4hbd_A 205 CEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDI 243 (276)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCT
T ss_pred CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCC
Confidence 999999999999999999999999999999999 89885
No 97
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.77 E-value=2.7e-18 Score=161.63 Aligned_cols=107 Identities=25% Similarity=0.294 Sum_probs=96.8
Q ss_pred chhhhcCCchhhhcC--CCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCC
Q 020810 212 TSADNAGADEAEEVG--NEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVD 289 (321)
Q Consensus 212 ~~~~~~~~~~~~~~d--~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~ 289 (321)
..++..+.+. +..+ ..|.||||+||..|+.++|++||++|++++..|..|+||||+|+..|+.++|++|+++|++++
T Consensus 217 ~~LL~~Gadv-n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~ 295 (368)
T 3jue_A 217 ADALAHGADV-NWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLG 295 (368)
T ss_dssp HHHHHTTCCT-TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHHHcCCCC-CccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCC
Confidence 3344555554 3444 789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCcHHHHHHHCCcHHHHHHHHHCCC
Q 020810 290 ALDKNKNTALHYAAGYGRKECVALLLENGA 319 (321)
Q Consensus 290 ~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GA 319 (321)
.+|..|+||||+|+..|+.++|++|+.+|.
T Consensus 296 ~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~ 325 (368)
T 3jue_A 296 ARDSEGRDPLTIAMETANADIVTLLRLAKM 325 (368)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHHC
T ss_pred CcCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 999999999999999999999999997653
No 98
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.76 E-value=6.5e-18 Score=155.31 Aligned_cols=98 Identities=28% Similarity=0.324 Sum_probs=93.2
Q ss_pred hcCCCCchHHHHHHHc---CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHH
Q 020810 224 EVGNEDESIVHHTASV---GDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALH 300 (321)
Q Consensus 224 ~~d~~g~t~Lh~Aa~~---g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh 300 (321)
..+..|.||||+|+.. +..+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||
T Consensus 206 ~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~ 285 (351)
T 3utm_A 206 KQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALH 285 (351)
T ss_dssp CCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred cCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHH
Confidence 3567889999999999 5589999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCcHHHHHHHHHCCCCC
Q 020810 301 YAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 301 ~A~~~g~~~iv~~Ll~~GAdv 321 (321)
+|+..|+.++|++|+++||++
T Consensus 286 ~A~~~~~~~~v~~Ll~~gad~ 306 (351)
T 3utm_A 286 RAALAGHLQTCRLLLSYGSDP 306 (351)
T ss_dssp HHHHHTCHHHHHHHHHTTCCT
T ss_pred HHHHcCcHHHHHHHHHcCCCC
Confidence 999999999999999999985
No 99
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.76 E-value=4.5e-18 Score=162.33 Aligned_cols=141 Identities=24% Similarity=0.297 Sum_probs=94.3
Q ss_pred CChHHHHHHhCChhHHHHHHHHhccc-----------------cCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCH
Q 020810 180 GGPSAMMKYWNDKDVLQKLGEAMGLA-----------------VGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDA 242 (321)
Q Consensus 180 g~~~~~~~~~~~~~~~~~l~~~~~~~-----------------~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~ 242 (321)
.++.+++...++.+++++|.+.-... ...+.+..++..+.+ ++.++..|+||||+||..|+.
T Consensus 15 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~ 93 (437)
T 1n11_A 15 LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAK-VNAKAKDDQTPLHCAARIGHT 93 (437)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCC-SSCCCTTSCCHHHHHHHHTCH
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHHCCCH
Confidence 35666667777777777766531100 001122233333333 345566777777777777777
Q ss_pred HHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 243 EGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 243 ~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
++|++|+++|++++..+..|+||||+|+..|+.+++++|++.+++++..+..|.||||+|+..|+.+++++|+++|+++
T Consensus 94 ~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~ 172 (437)
T 1n11_A 94 NMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHP 172 (437)
T ss_dssp HHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC
Confidence 7777777777777777777777777777777777777777777777777777777777777777777777777777753
No 100
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.76 E-value=1.1e-18 Score=161.28 Aligned_cols=127 Identities=24% Similarity=0.197 Sum_probs=107.0
Q ss_pred HcCChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCC---HHHHHHHHHcC-C
Q 020810 178 ESGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGD---AEGLKNALAAG-A 253 (321)
Q Consensus 178 ~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~---~~~v~~Ll~~g-~ 253 (321)
...++.+++...++.+++++|.+. |++ ++.+|..|+||||+|+..|+ .++++.|++.+ .
T Consensus 130 ~g~TpLh~Aa~~g~~~~v~~Ll~~----------------Gad-~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~ 192 (327)
T 1sw6_A 130 HGNTPLHWLTSIANLELVKHLVKH----------------GSN-RLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYP 192 (327)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHT----------------TCC-TTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGG
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHc----------------CCC-CCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhc
Confidence 345788888888888888887643 333 35678889999999999988 67888888776 6
Q ss_pred CCCCCCCCCCcHHHHHHH----CCCHHHHHHHHHcCC-------------------------------------------
Q 020810 254 DKDEEDSEGRTALHFACG----YGEVKCAQILLEAGA------------------------------------------- 286 (321)
Q Consensus 254 ~~~~~d~~g~TpLh~A~~----~g~~~~v~~Ll~~ga------------------------------------------- 286 (321)
+++.+|..|+||||+|+. .|+.+++++|++.++
T Consensus 193 ~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll 272 (327)
T 1sw6_A 193 CLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWII 272 (327)
T ss_dssp GGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHH
T ss_pred cccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHH
Confidence 788899999999999998 899999999987743
Q ss_pred --CCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 287 --NVDALDKNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 287 --~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
+++.+|..|+||||+|+..|+.++|++|+++|||+
T Consensus 273 ~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~ 309 (327)
T 1sw6_A 273 ANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADP 309 (327)
T ss_dssp HHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCT
T ss_pred HhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 57888999999999999999999999999999986
No 101
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.75 E-value=4.8e-18 Score=159.71 Aligned_cols=142 Identities=24% Similarity=0.258 Sum_probs=112.7
Q ss_pred CChHHHHHHhCChhHHHHHHHHhcccc-----C------------CcccchhhhcCC--chhhhcCCCCchHHHHHHHcC
Q 020810 180 GGPSAMMKYWNDKDVLQKLGEAMGLAV-----G------------GDATTSADNAGA--DEAEEVGNEDESIVHHTASVG 240 (321)
Q Consensus 180 g~~~~~~~~~~~~~~~~~l~~~~~~~~-----~------------~d~~~~~~~~~~--~~~~~~d~~g~t~Lh~Aa~~g 240 (321)
.++.+++...++.+++++|.+.-.... + .+.+..++..+. ..++..+..|.||||+|+..+
T Consensus 167 ~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~ 246 (373)
T 2fo1_E 167 NTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNE 246 (373)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSC
T ss_pred CCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhC
Confidence 356677777777777777765421000 0 011122222221 234567889999999999998
Q ss_pred ---CHHHHHHHHHcCCCCCC--------CCCCCCcHHHHHHHCCCHHHHHHHHHcC-CCCCCccCCCCcHHHHHHHCCcH
Q 020810 241 ---DAEGLKNALAAGADKDE--------EDSEGRTALHFACGYGEVKCAQILLEAG-ANVDALDKNKNTALHYAAGYGRK 308 (321)
Q Consensus 241 ---~~~~v~~Ll~~g~~~~~--------~d~~g~TpLh~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~TpLh~A~~~g~~ 308 (321)
+.+++++|++.|++++. .|..|+||||+|+..|+.++|++|++++ ++++.+|..|+||||+|+..|+.
T Consensus 247 ~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~ 326 (373)
T 2fo1_E 247 GRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRI 326 (373)
T ss_dssp STTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred CcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCH
Confidence 89999999999999886 5778999999999999999999999886 99999999999999999999999
Q ss_pred HHHHHHHHCCCCC
Q 020810 309 ECVALLLENGAAV 321 (321)
Q Consensus 309 ~iv~~Ll~~GAdv 321 (321)
++|++|+++||++
T Consensus 327 ~iv~~Ll~~gad~ 339 (373)
T 2fo1_E 327 EVVMYLIQQGASV 339 (373)
T ss_dssp HHHHHHHHTTCCS
T ss_pred HHHHHHHHcCCCc
Confidence 9999999999985
No 102
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.75 E-value=2.3e-17 Score=143.48 Aligned_cols=107 Identities=26% Similarity=0.340 Sum_probs=66.4
Q ss_pred hhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCC
Q 020810 215 DNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKN 294 (321)
Q Consensus 215 ~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~ 294 (321)
+..+.+.....+..|.||||+|+..|+.+++++|++.|++++..+..|+||||+|+..|+.+++++|+++|++++..+..
T Consensus 62 l~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~ 141 (240)
T 3eu9_A 62 ISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQN 141 (240)
T ss_dssp HHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred HHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCC
Confidence 34444444444455666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred CCcHHHHHHHCCc-HHHHHHHHHCCCCC
Q 020810 295 KNTALHYAAGYGR-KECVALLLENGAAV 321 (321)
Q Consensus 295 g~TpLh~A~~~g~-~~iv~~Ll~~GAdv 321 (321)
|.||||+|+..++ .+++++|+++|+++
T Consensus 142 g~t~l~~a~~~~~~~~~~~~L~~~~~~~ 169 (240)
T 3eu9_A 142 GMTPLMWAAYRTHSVDPTRLLLTFNVSV 169 (240)
T ss_dssp SCCHHHHHHHHCCSSTTHHHHHHTTCCT
T ss_pred CCcHHHHHHHhCChHHHHHHHHhcCCCc
Confidence 6666666664443 56666666666653
No 103
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.73 E-value=4.5e-17 Score=141.65 Aligned_cols=109 Identities=35% Similarity=0.421 Sum_probs=97.6
Q ss_pred chhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCC-HHHHHHHHHcCCCCCC
Q 020810 212 TSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGE-VKCAQILLEAGANVDA 290 (321)
Q Consensus 212 ~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~-~~~v~~Ll~~ga~~~~ 290 (321)
..++..+.+ .+..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++ .+++++|+..|++++.
T Consensus 93 ~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~ 171 (240)
T 3eu9_A 93 VQLMKYGAD-PSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNL 171 (240)
T ss_dssp HHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTC
T ss_pred HHHHHcCCC-CcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcch
Confidence 334444444 35668889999999999999999999999999999999999999999997766 8999999999999999
Q ss_pred ccC-CCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 291 LDK-NKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 291 ~d~-~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
.+. .|.||||+|+..|+.+++++|+++|+++
T Consensus 172 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 203 (240)
T 3eu9_A 172 GDKYHKNTALHWAVLAGNTTVISLLLEAGANV 203 (240)
T ss_dssp CCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCT
T ss_pred hhccCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 987 9999999999999999999999999985
No 104
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.72 E-value=4.1e-18 Score=157.48 Aligned_cols=104 Identities=18% Similarity=0.122 Sum_probs=93.1
Q ss_pred hhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHCCC---HHHHHHHHHcC-CCCC
Q 020810 214 ADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGE---VKCAQILLEAG-ANVD 289 (321)
Q Consensus 214 ~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~TpLh~A~~~g~---~~~v~~Ll~~g-a~~~ 289 (321)
+...+.+....+|..|+||||+||..|+.++|++||++|++++.+|..|+||||+|+.+|+ .++++.|++++ ++++
T Consensus 116 l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~ 195 (327)
T 1sw6_A 116 FPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLI 195 (327)
T ss_dssp CTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGG
T ss_pred HHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhcccc
Confidence 3344555433379999999999999999999999999999999999999999999999998 68888888886 7899
Q ss_pred CccCCCCcHHHHHHH----CCcHHHHHHHHHC
Q 020810 290 ALDKNKNTALHYAAG----YGRKECVALLLEN 317 (321)
Q Consensus 290 ~~d~~g~TpLh~A~~----~g~~~iv~~Ll~~ 317 (321)
.+|..|+||||+|+. .|+.+++++|++.
T Consensus 196 ~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~ 227 (327)
T 1sw6_A 196 LEDSMNRTILHHIIITSGMTGCSAAAKYYLDI 227 (327)
T ss_dssp EECTTCCCHHHHHHHHHTSTTCHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHccccccHHHHHHHHHH
Confidence 999999999999999 9999999999987
No 105
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.71 E-value=3.5e-17 Score=154.02 Aligned_cols=97 Identities=25% Similarity=0.312 Sum_probs=91.8
Q ss_pred cCCCCchHHHHHHHc-CCHHHHHHHHHcCCCCCCCC--CCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHH
Q 020810 225 VGNEDESIVHHTASV-GDAEGLKNALAAGADKDEED--SEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHY 301 (321)
Q Consensus 225 ~d~~g~t~Lh~Aa~~-g~~~~v~~Ll~~g~~~~~~d--~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~ 301 (321)
....+.|+||+|+.. |++++|++||+.|++++..+ ..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+
T Consensus 195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~ 274 (368)
T 3jue_A 195 GSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHH 274 (368)
T ss_dssp --CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred ccCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 345677999999999 99999999999999999998 899999999999999999999999999999999999999999
Q ss_pred HHHCCcHHHHHHHHHCCCCC
Q 020810 302 AAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 302 A~~~g~~~iv~~Ll~~GAdv 321 (321)
|+..|+.++|++|+++||++
T Consensus 275 A~~~g~~~~v~~LL~~Gad~ 294 (368)
T 3jue_A 275 ATILGHTGLACLFLKRGADL 294 (368)
T ss_dssp HHHHTCHHHHHHHHHTTCCT
T ss_pred HHHcCcHHHHHHHHHCcCCC
Confidence 99999999999999999986
No 106
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.70 E-value=1.8e-16 Score=146.15 Aligned_cols=124 Identities=26% Similarity=0.280 Sum_probs=107.1
Q ss_pred hHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Q 020810 182 PSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSE 261 (321)
Q Consensus 182 ~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~~ 261 (321)
+...+...++.++++.|+ ..|+++....+..|+||||+||..|+.++|++||++|++++.++..
T Consensus 28 ~L~~Av~~g~~~~V~~LL----------------~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~ 91 (337)
T 4g8k_A 28 LLIKAVQNEDVDLVQQLL----------------EGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKN 91 (337)
T ss_dssp HHHHHHHTTCHHHHHHHH----------------HHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred HHHHHHHcCCHHHHHHHH----------------HCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccC
Confidence 344445556666666665 3345543333456999999999999999999999999999999999
Q ss_pred CCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 262 GRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 262 g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
+.+++++++..+...++..++..+++++..|..|+||||+|+..|+.+++++|+++|+++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~ 151 (337)
T 4g8k_A 92 GATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANV 151 (337)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCc
Confidence 999999999999999999999999999999999999999999999999999999999975
No 107
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.67 E-value=2.5e-16 Score=144.23 Aligned_cols=93 Identities=28% Similarity=0.435 Sum_probs=89.0
Q ss_pred CchHHHHHHHcCCHHHHHHHHHcCCCCCC------CCCCCCcHHHHHHHC---CCHHHHHHHHHcCCCCCCccCCCCcHH
Q 020810 229 DESIVHHTASVGDAEGLKNALAAGADKDE------EDSEGRTALHFACGY---GEVKCAQILLEAGANVDALDKNKNTAL 299 (321)
Q Consensus 229 g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~------~d~~g~TpLh~A~~~---g~~~~v~~Ll~~ga~~~~~d~~g~TpL 299 (321)
+.++||.|+..|+++.|+.|+..|++++. .+..|+||||+|+.. ++.+++++|+++|++++.+|..|+|||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpL 230 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 230 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHH
Confidence 45789999999999999999999999998 689999999999997 899999999999999999999999999
Q ss_pred HHHHHCCcHHHHHHHHHCCCCC
Q 020810 300 HYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 300 h~A~~~g~~~iv~~Ll~~GAdv 321 (321)
|+|+..|+.++|++|+++||++
T Consensus 231 h~A~~~g~~~~v~~Ll~~gad~ 252 (301)
T 2b0o_E 231 HYAALYNQPDCLKLLLKGRALV 252 (301)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCC
T ss_pred HHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999999986
No 108
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.67 E-value=2e-16 Score=154.49 Aligned_cols=92 Identities=28% Similarity=0.426 Sum_probs=88.2
Q ss_pred chHHHHHHHcCCHHHHHHHHHcCCCCCCC------CCCCCcHHHHHHH---CCCHHHHHHHHHcCCCCCCccCCCCcHHH
Q 020810 230 ESIVHHTASVGDAEGLKNALAAGADKDEE------DSEGRTALHFACG---YGEVKCAQILLEAGANVDALDKNKNTALH 300 (321)
Q Consensus 230 ~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~------d~~g~TpLh~A~~---~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh 300 (321)
.+.||.|+..|++++|+.||+.|++++.. |..|+||||+||. .|+.++|++|+++|++++.+|..|+||||
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh 212 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALH 212 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHH
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHH
Confidence 47799999999999999999999999987 8899999999976 89999999999999999999999999999
Q ss_pred HHHHCCcHHHHHHHHHCCCCC
Q 020810 301 YAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 301 ~A~~~g~~~iv~~Ll~~GAdv 321 (321)
+|+..|+.++|++|+++||++
T Consensus 213 ~A~~~g~~~~v~~Ll~~ga~~ 233 (497)
T 3lvq_E 213 YAALYNQPDCLKLLLKGRALV 233 (497)
T ss_dssp HHTTTTCHHHHHHHHHTCCCC
T ss_pred HHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999986
No 109
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.66 E-value=4.9e-16 Score=140.60 Aligned_cols=92 Identities=28% Similarity=0.386 Sum_probs=86.8
Q ss_pred chHHHHHHHcCCHHHHHHHHHcCCCC------CCCCCCCCcHHHHHHHC---CCHHHHHHHHHcCCCCCCccCCCCcHHH
Q 020810 230 ESIVHHTASVGDAEGLKNALAAGADK------DEEDSEGRTALHFACGY---GEVKCAQILLEAGANVDALDKNKNTALH 300 (321)
Q Consensus 230 ~t~Lh~Aa~~g~~~~v~~Ll~~g~~~------~~~d~~g~TpLh~A~~~---g~~~~v~~Ll~~ga~~~~~d~~g~TpLh 300 (321)
.++||.|+..|+.+.++.++..|+++ +..|..|+||||+|+.. ++.+++++|+++|++++.+|..|+||||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh 210 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALH 210 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHH
Confidence 46899999999999999999999984 44588999999999999 8999999999999999999999999999
Q ss_pred HHHHCCcHHHHHHHHHCCCCC
Q 020810 301 YAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 301 ~A~~~g~~~iv~~Ll~~GAdv 321 (321)
+|+..|+.++|++|+++||++
T Consensus 211 ~A~~~g~~~~v~~Ll~~gad~ 231 (278)
T 1dcq_A 211 YCCLTDNAECLKLLLRGKASI 231 (278)
T ss_dssp HHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999986
No 110
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.63 E-value=1.9e-17 Score=156.29 Aligned_cols=124 Identities=15% Similarity=0.151 Sum_probs=97.9
Q ss_pred ChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCC---CC
Q 020810 181 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADK---DE 257 (321)
Q Consensus 181 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~---~~ 257 (321)
++.+.+...++.++++.|.+... .....+..+..|.||||+||..|+.++|++|+++|+++ +.
T Consensus 94 T~Lh~Aa~~G~~e~v~~Ll~~ga--------------~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i 159 (376)
T 2aja_A 94 VICFVAAITGCSSALDTLCLLLT--------------SDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMI 159 (376)
T ss_dssp HHHHHHHHHCCHHHHHHHTTC----------------CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCC--------------cHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccc
Confidence 56677777888888877753210 00011123445789999999999999999999999762 33
Q ss_pred CCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCC--ccCCCCcHHHHHH-HCCcHHHHHHHHHCCC
Q 020810 258 EDSEGRTALHFACGYGEVKCAQILLEAGANVDA--LDKNKNTALHYAA-GYGRKECVALLLENGA 319 (321)
Q Consensus 258 ~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~--~d~~g~TpLh~A~-~~g~~~iv~~Ll~~GA 319 (321)
.+.+ +||||+|+..|+.++|++|+++|++++. .|..|+||||+|+ ..|+.++|++|+++|+
T Consensus 160 ~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga 223 (376)
T 2aja_A 160 QAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV 223 (376)
T ss_dssp SHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH
T ss_pred CCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC
Confidence 3333 9999999999999999999999999887 8889999999999 9999999999998764
No 111
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.62 E-value=5.1e-15 Score=110.86 Aligned_cols=91 Identities=35% Similarity=0.471 Sum_probs=79.1
Q ss_pred CChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 020810 180 GGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEED 259 (321)
Q Consensus 180 g~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d 259 (321)
.++.+++...++.++++.|.+. +.+ ++.+|..|+||||+|+..|+.+++++|+++|++++.+|
T Consensus 3 ~t~L~~A~~~~~~~~v~~Ll~~----------------g~~-~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d 65 (93)
T 1n0q_A 3 RTPLHLAARNGHLEVVKLLLEA----------------GAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKD 65 (93)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHT----------------TCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CcHHHHHHHcCCHHHHHHHHHc----------------CCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccC
Confidence 3567777777888888777532 322 46678899999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHCCCHHHHHHHHHcCCC
Q 020810 260 SEGRTALHFACGYGEVKCAQILLEAGAN 287 (321)
Q Consensus 260 ~~g~TpLh~A~~~g~~~~v~~Ll~~ga~ 287 (321)
..|+||||+|+..|+.+++++|+++|++
T Consensus 66 ~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 66 KNGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999999999999975
No 112
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.59 E-value=4.4e-16 Score=146.99 Aligned_cols=95 Identities=20% Similarity=0.159 Sum_probs=78.6
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHcCCCC---CCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCC---CCccCCCCcHH
Q 020810 226 GNEDESIVHHTASVGDAEGLKNALAAGADK---DEEDSEGRTALHFACGYGEVKCAQILLEAGANV---DALDKNKNTAL 299 (321)
Q Consensus 226 d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~---~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~---~~~d~~g~TpL 299 (321)
+.+++||||+||..|+.++|++|++.|+.. +..+..|.||||+|+.+|+.++|++|+++|+++ +..+.+ +|||
T Consensus 89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpL 167 (376)
T 2aja_A 89 GIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAF 167 (376)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHH
T ss_pred CCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHH
Confidence 455679999999999999999999998732 234556889999999999999999999999863 333333 9999
Q ss_pred HHHHHCCcHHHHHHHHHCCCCC
Q 020810 300 HYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 300 h~A~~~g~~~iv~~Ll~~GAdv 321 (321)
|+|+..|+.++|++|+++|+++
T Consensus 168 h~Aa~~G~~eiv~~Ll~~ga~~ 189 (376)
T 2aja_A 168 RLAAENGHLHVLNRLCELAPTE 189 (376)
T ss_dssp HHHHHTTCHHHHHHHHHSCGGG
T ss_pred HHHHHCCCHHHHHHHHHcCCcc
Confidence 9999999999999999999873
No 113
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.58 E-value=2.3e-15 Score=117.00 Aligned_cols=102 Identities=26% Similarity=0.301 Sum_probs=85.4
Q ss_pred ChHHHHHHhCChhHHHHHHHHhccccCCcccchhhhcCCchhhhcCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 020810 181 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDS 260 (321)
Q Consensus 181 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~~~~~~d~ 260 (321)
++.+.+...++.++++.|.+ .+.+ ++..|..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 11 t~L~~A~~~~~~~~~~~Ll~----------------~g~~-~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~ 73 (115)
T 2l6b_A 11 TPLHNAAKNGHAEEVKKLLS----------------KGAD-VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSK 73 (115)
T ss_dssp CHHHHHHHHTCHHHHHHHTT----------------TTCC-SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCT
T ss_pred CHHHHHHHcCCHHHHHHHHH----------------cCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCC
Confidence 45566666666776666642 2332 456688999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHH
Q 020810 261 EGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTAL 299 (321)
Q Consensus 261 ~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL 299 (321)
.|+||||+|+..++.+++++|+++|++++.++..|.||-
T Consensus 74 ~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 74 DGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp TCCCTTHHHHTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 999999999999999999999999999999999999884
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.41 E-value=3.2e-13 Score=104.38 Aligned_cols=67 Identities=42% Similarity=0.451 Sum_probs=60.5
Q ss_pred CCCCCCCCCcHHHHHHHCCCHHHHHHHHHcCCCCCCccCCCCcHHHHHHHCCcHHHHHHHHHCCCCC
Q 020810 255 KDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAV 321 (321)
Q Consensus 255 ~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~GAdv 321 (321)
+...|..|+|+||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|+++
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~ 83 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADV 83 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 3456788999999999999999999999999999999999999999999999999999999999985
No 115
>2llw_A Heat shock protein STI1; DP domain, alpha helix, chaperone; NMR {Saccharomyces cerevisiae}
Probab=97.64 E-value=3.1e-05 Score=54.49 Aligned_cols=53 Identities=25% Similarity=0.432 Sum_probs=33.9
Q ss_pred HHHHHhhcCCchHHHHHHHHhcCchHHHHHHHHHhhhccCCccccCCCCChhhhHHHHHHhhcCcHHHHHHHHHH
Q 020810 58 FSAMSGLLNDPSIKELAEQIAKDPAFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQNPQFMTMAERLG 132 (321)
Q Consensus 58 ~~~~~~~~~~p~~~~~~~~~~~~p~~~~maeq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~np~~~~m~e~l~ 132 (321)
.+.+..+|+||.|.. +|+||.|+++.++++..- ..++..++||.+..++++|.
T Consensus 10 ee~~~~~m~dPEi~~----im~DP~~~~~lq~~~~NP------------------~~~~k~~~nP~v~~~i~kl~ 62 (71)
T 2llw_A 10 EETYQRAMKDPEVAA----IMQDPVMQSILQQAQQNP------------------AALQEHMKNPEVFKKIQTLI 62 (71)
T ss_dssp HHHHHHHHHSHHHHH----HHTCTHHHHHHHHHHHCH------------------HHHHHHHHSHHHHHHHHHHH
T ss_pred HHHHHHHhcCHHHHH----HhCCHHHHHHHHHHHHCH------------------HHHHHHHhCHHHHHHHHHHH
Confidence 334445555554433 455555555555544422 67778899999999999985
No 116
>2lnm_A Protein TIC 40, chloroplastic; translocon, import, TIC40-NP, protein transport; NMR {Arabidopsis thaliana}
Probab=97.50 E-value=9e-05 Score=50.81 Aligned_cols=20 Identities=5% Similarity=0.243 Sum_probs=15.5
Q ss_pred HHHHHhhcCcHHHHHHHHHH
Q 020810 113 STMQQVMQNPQFMTMAERLG 132 (321)
Q Consensus 113 ~~~~~~m~np~~~~m~e~l~ 132 (321)
..++..++||.+..+++.+-
T Consensus 35 ~~~~~~~~dP~v~~~~~~L~ 54 (62)
T 2lnm_A 35 MNIMKYQNDKEVMDVFNKIS 54 (62)
T ss_dssp GGHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHhChHHHHHHHHHH
Confidence 55667788999888888774
No 117
>2llw_A Heat shock protein STI1; DP domain, alpha helix, chaperone; NMR {Saccharomyces cerevisiae}
Probab=97.10 E-value=5.9e-05 Score=53.07 Aligned_cols=45 Identities=18% Similarity=0.223 Sum_probs=36.6
Q ss_pred CCCCCCCCCChhcHHHHHhhcCCchHHHHHHHHhcCchHHHHHHHHHh
Q 020810 45 FPGVGGAAPNPFDFSAMSGLLNDPSIKELAEQIAKDPAFNSMAEQLQK 92 (321)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~maeq~~~ 92 (321)
.|.+.++|.||.++++++.|++|| ..+...|+||.|+++.+.|..
T Consensus 19 dPEi~~im~DP~~~~~lq~~~~NP---~~~~k~~~nP~v~~~i~kl~~ 63 (71)
T 2llw_A 19 DPEVAAIMQDPVMQSILQQAQQNP---AALQEHMKNPEVFKKIQTLIA 63 (71)
T ss_dssp SHHHHHHHTCTHHHHHHHHHHHCH---HHHHHHHHSHHHHHHHHHHHH
T ss_pred CHHHHHHhCCHHHHHHHHHHHHCH---HHHHHHHhCHHHHHHHHHHHH
Confidence 356677889999999999999999 555558899999999998854
No 118
>2lnm_A Protein TIC 40, chloroplastic; translocon, import, TIC40-NP, protein transport; NMR {Arabidopsis thaliana}
Probab=97.03 E-value=0.00014 Score=49.80 Aligned_cols=47 Identities=17% Similarity=0.160 Sum_probs=37.2
Q ss_pred CCCCCCCChhcHHHHHhhcCCchHHHHHHHHhcCchHHHHHHHHHhhhcc
Q 020810 47 GVGGAAPNPFDFSAMSGLLNDPSIKELAEQIAKDPAFNSMAEQLQKTLHG 96 (321)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~maeq~~~~~~~ 96 (321)
.+..+|.||.++++++.+++||+.. ...++||.++++.+.|-.-.++
T Consensus 13 e~~~~m~dP~~~~~lq~i~~NP~~~---~~~~~dP~v~~~~~~L~~~~~g 59 (62)
T 2lnm_A 13 DVAMAFQNPRVQAALMECSENPMNI---MKYQNDKEVMDVFNKISQLFPG 59 (62)
T ss_dssp HHHHHTTSHHHHHHHHHHTTCGGGH---HHHTTCHHHHHHHHHHHHHSSS
T ss_pred HHHHHcCCHHHHHHHHHHHHCHHHH---HHHHhChHHHHHHHHHHHHhCC
Confidence 3456788999999999999999644 4488999999999988766554
No 119
>2llv_A Heat shock protein STI1; DP domain, alpha helix, chaperone; NMR {Saccharomyces cerevisiae}
Probab=96.69 E-value=0.00057 Score=48.10 Aligned_cols=47 Identities=23% Similarity=0.448 Sum_probs=30.9
Q ss_pred hhcCCchHHHHHHHHhcCchHHHHHHHHHhhhccCCccccCCCCChhhhHHHHHH-hhcCcHHHHHHHHH
Q 020810 63 GLLNDPSIKELAEQIAKDPAFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQ-VMQNPQFMTMAERL 131 (321)
Q Consensus 63 ~~~~~p~~~~~~~~~~~~p~~~~maeq~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~m~np~~~~m~e~l 131 (321)
.|++||.++. +++||.|+++-+++++.= ..++. .++||.+.+.++.+
T Consensus 18 kl~~dP~t~~----~~~DP~~~~~lq~i~~NP------------------~~i~~~~~~dPrv~~~l~~L 65 (71)
T 2llv_A 18 NLKKNPKTSE----MMKDPQLVAKLIGYKQNP------------------QAIGQDLFTDPRLMTIMATL 65 (71)
T ss_dssp HHHHSSTTHH----HHHSCTHHHHHHHHHHSC------------------TTHHHHTTTCHHHHHHHHHH
T ss_pred HHHcChHHHH----HhcCHHHHHHHHHHHHCH------------------HHHHHHHhhCcHHHHHHHHH
Confidence 4666665555 456666666666655433 45566 78999998888775
No 120
>2qsf_X RAD23, UV excision repair protein RAD23; alpha-beta structure, beta hairpin, transglutaminase fold, DNA-damage recognition, DNA repair; HET: DNA; 2.35A {Saccharomyces cerevisiae} PDB: 2qsg_X* 2qsh_X* 1x3z_B* 1x3w_B* 3esw_B*
Probab=94.18 E-value=0.033 Score=45.75 Aligned_cols=42 Identities=17% Similarity=0.136 Sum_probs=25.5
Q ss_pred CCCCC-CChhcHHHHHhhcCCchHHH-HHHHHh-cCchHHHHHHH
Q 020810 48 VGGAA-PNPFDFSAMSGLLNDPSIKE-LAEQIA-KDPAFNSMAEQ 89 (321)
Q Consensus 48 ~~~~~-~~~~~~~~~~~~~~~p~~~~-~~~~~~-~~p~~~~maeq 89 (321)
+..|+ +||++-++.+-+.+||++.+ +.+||. +||++.++-.+
T Consensus 25 l~~L~~~~Pqf~qlRq~vqqNPqlL~~lLqqig~~NPqL~qlI~q 69 (171)
T 2qsf_X 25 PGSIGLTVEDLLSLRQVVSGNPEALAPLLENISARYPQLREHIMA 69 (171)
T ss_dssp ---CCCCHHHHHHHHHHHHTCGGGHHHHHHHHHHHCTTHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHCHHHHHHHHHHHHhhCHHHHHHHHH
Confidence 67787 88866666566778887554 444442 58876666555
No 121
>2qsf_X RAD23, UV excision repair protein RAD23; alpha-beta structure, beta hairpin, transglutaminase fold, DNA-damage recognition, DNA repair; HET: DNA; 2.35A {Saccharomyces cerevisiae} PDB: 2qsg_X* 2qsh_X* 1x3z_B* 1x3w_B* 3esw_B*
Probab=90.29 E-value=0.2 Score=41.06 Aligned_cols=33 Identities=9% Similarity=0.226 Sum_probs=23.2
Q ss_pred HHhhc-CCchHHHHHHHHhcCch-HHHHHHHHHhh
Q 020810 61 MSGLL-NDPSIKELAEQIAKDPA-FNSMAEQLQKT 93 (321)
Q Consensus 61 ~~~~~-~~p~~~~~~~~~~~~p~-~~~maeq~~~~ 93 (321)
+..|+ ++|.|.+|-+.|.+||+ +..+-+|+++.
T Consensus 25 l~~L~~~~Pqf~qlRq~vqqNPqlL~~lLqqig~~ 59 (171)
T 2qsf_X 25 PGSIGLTVEDLLSLRQVVSGNPEALAPLLENISAR 59 (171)
T ss_dssp ---CCCCHHHHHHHHHHHHTCGGGHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 45688 99999999999999996 34455555443
No 122
>2llv_A Heat shock protein STI1; DP domain, alpha helix, chaperone; NMR {Saccharomyces cerevisiae}
Probab=86.49 E-value=0.081 Score=36.89 Aligned_cols=21 Identities=14% Similarity=0.286 Sum_probs=17.3
Q ss_pred hcCCchHHHHHHHHhcCchHH
Q 020810 64 LLNDPSIKELAEQIAKDPAFN 84 (321)
Q Consensus 64 ~~~~p~~~~~~~~~~~~p~~~ 84 (321)
+|+||.++++.++|++||+-.
T Consensus 28 ~~~DP~~~~~lq~i~~NP~~i 48 (71)
T 2llv_A 28 MMKDPQLVAKLIGYKQNPQAI 48 (71)
T ss_dssp HHHSCTHHHHHHHHHHSCTTH
T ss_pred HhcCHHHHHHHHHHHHCHHHH
Confidence 888999998888888888543
No 123
>2lbb_A Acyl COA binding protein; protein binding, structural genomi seattle structural genomics center for infectious disease,; NMR {Babesia bovis}
Probab=72.56 E-value=6.8 Score=28.70 Aligned_cols=76 Identities=12% Similarity=0.174 Sum_probs=55.2
Q ss_pred HhcCchHHHHHHHHHhhhccCCccccCCCCChhhhHHHHHHhhc------CcHHHHHHHHHHhhhcCCChhhHHHHhcCC
Q 020810 77 IAKDPAFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQ------NPQFMTMAERLGNALMQDPSMSHMMESLTN 150 (321)
Q Consensus 77 ~~~~p~~~~maeq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~------np~~~~m~e~l~~~~~~~p~l~~m~~~l~d 150 (321)
-|+-..|...++.+++--. ...+.-+..++|..++|.+. .|.+..+..+.. |+.++.+..
T Consensus 8 ~~~~~~F~~A~~~vk~l~~-----~~ps~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~graK---------w~AW~~l~g 73 (96)
T 2lbb_A 8 HMSADDFDAAVKYVSNTTT-----MMASNDDKLCFYKYYKQATVGDCNKPKPGMLQLQEKYK---------WEAWNALRG 73 (96)
T ss_dssp -CCSSTHHHHHHHHHHCCC-----SCCCTTTTTHHHHHHHHTTTSSCCCCCCCSSCSHHHHH---------HHHHHHTTT
T ss_pred ccCHHHHHHHHHHHHhCCC-----CCCCHHHHHHHHHHHHHHhcCCCCCCCCCcccHHhHHH---------HHHHHHhcC
Confidence 3677889999999876331 23456677899999999874 677666666665 777888888
Q ss_pred CCchhHHHHHHHHhhc
Q 020810 151 PTKKDQIEERMAKIKE 166 (321)
Q Consensus 151 p~~~~~~~~~~~~l~~ 166 (321)
.+..+...+.+..+.+
T Consensus 74 mS~eeAm~~YI~lv~~ 89 (96)
T 2lbb_A 74 MSTESAKEAYVKLLDT 89 (96)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 8888777777766554
No 124
>2f4m_B UV excision repair protein RAD23 homolog B; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: a.189.1.1 PDB: 2f4o_B*
Probab=70.00 E-value=7.4 Score=25.95 Aligned_cols=20 Identities=25% Similarity=0.526 Sum_probs=13.7
Q ss_pred hhcCCchHHHHHHHHhcCch
Q 020810 63 GLLNDPSIKELAEQIAKDPA 82 (321)
Q Consensus 63 ~~~~~p~~~~~~~~~~~~p~ 82 (321)
-|.++|.|.+|-+.+.+||+
T Consensus 6 ~Lr~~Pqf~~lR~~vq~NP~ 25 (61)
T 2f4m_B 6 FLRNQPQFQQMRQIIQQNPS 25 (61)
T ss_dssp GGTTCHHHHHHHHHHHHCGG
T ss_pred HHHcChHHHHHHHHHHHCHH
Confidence 46677777777666777774
No 125
>1pve_A HHR23B, UV excision repair protein RAD23 homolog B; XPC binding domain, solution structure, nucleotide excision repair, chaps, DNA binding protein; NMR {Homo sapiens} SCOP: a.189.1.1
Probab=68.92 E-value=4.5 Score=27.95 Aligned_cols=20 Identities=25% Similarity=0.526 Sum_probs=11.5
Q ss_pred hhcCCchHHHHHHHHhcCch
Q 020810 63 GLLNDPSIKELAEQIAKDPA 82 (321)
Q Consensus 63 ~~~~~p~~~~~~~~~~~~p~ 82 (321)
-|.++|.|.+|-+.+.+||+
T Consensus 8 ~Lr~~Pqf~qlR~~vqqNP~ 27 (72)
T 1pve_A 8 FLRNQPQFQQMRQIIQQNPS 27 (72)
T ss_dssp GGTTCTTTTTHHHHHTTCGG
T ss_pred HHHcChHHHHHHHHHHHCHH
Confidence 35566665555555666663
No 126
>3fp5_A Acyl-COA binding protein; ACBP, cacao disease, fatty acid metabolism, lipid binding protein; HET: MES; 1.61A {Moniliophthora perniciosa} SCOP: a.11.1.0
Probab=68.52 E-value=5.7 Score=29.68 Aligned_cols=75 Identities=15% Similarity=0.201 Sum_probs=52.6
Q ss_pred CchHHHHHHHHHhhhccCCccccCCCCChhhhHHHHHHhhc------CcHHHHHHHHHHhhhcCCChhhHHHHhcCCCCc
Q 020810 80 DPAFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQ------NPQFMTMAERLGNALMQDPSMSHMMESLTNPTK 153 (321)
Q Consensus 80 ~p~~~~maeq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~------np~~~~m~e~l~~~~~~~p~l~~m~~~l~dp~~ 153 (321)
+..|...++.+++--.+ +-...+.-+...+|..++|.+. .|.+..+..+.. |+.|+.+.....
T Consensus 5 ~~~F~~A~~~vk~l~~~--g~~~ps~~~~L~LYalyKQAt~Gd~~~~~Pg~~d~~~raK---------w~AW~~l~gmS~ 73 (106)
T 3fp5_A 5 KAKFDKAVEIVQSLPKD--GPIKPTQDEQLYFYKYFKQATVGDVNISRPGLMDFTGKAK---------WDAWKSVEGTSK 73 (106)
T ss_dssp HHHHHHHHHHHHHCCSS--SSSCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHH---------HHHHHTTTTCCH
T ss_pred HHHHHHHHHHHHhcccc--cCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCccchHHHHH---------HHHHHHccCCCH
Confidence 45688888888754322 1224456677799999999885 677777777775 778888888777
Q ss_pred hhHHHHHHHHhh
Q 020810 154 KDQIEERMAKIK 165 (321)
Q Consensus 154 ~~~~~~~~~~l~ 165 (321)
.......+..+.
T Consensus 74 eeA~~~YI~~v~ 85 (106)
T 3fp5_A 74 EVAYQKYVEKLL 85 (106)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 777776665543
No 127
>2cqu_A Peroxisomal D3,D2-enoyl-COA isomerase; acyl-COA binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=64.77 E-value=3.7 Score=31.23 Aligned_cols=70 Identities=10% Similarity=0.135 Sum_probs=49.8
Q ss_pred hHHHHHHHHHhhhccCCccccCCCCChhhhHHHHHHhhc------CcHHHHHHHHHHhhhcCCChhhHHHHhcCCCCchh
Q 020810 82 AFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQ------NPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKD 155 (321)
Q Consensus 82 ~~~~maeq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~------np~~~~m~e~l~~~~~~~p~l~~m~~~l~dp~~~~ 155 (321)
.|...++.+.+--. ..+.-+..++|..++|.+. .|.+..+..+.. |+.|+.+.......
T Consensus 19 ~F~~A~~~vk~l~~------~p~~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~graK---------w~AW~~l~gms~ee 83 (116)
T 2cqu_A 19 DFENSMNQVKLLKK------DPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAK---------WDAWNALGSLPKEA 83 (116)
T ss_dssp HHHHHHHHHHHCCS------CCCHHHHHHHHHHHTTTTTCSCCSCCCCTTCHHHHHH---------HHHHHHHCSCCHHH
T ss_pred HHHHHHHHHHHccC------CCCHHHHHHHHHHHHHHhcCCCCCCCCCcccHHHHHH---------HHHHHHhcCCCHHH
Confidence 37777777765332 1234466789999999865 677777777765 78888888888888
Q ss_pred HHHHHHHHhhc
Q 020810 156 QIEERMAKIKE 166 (321)
Q Consensus 156 ~~~~~~~~l~~ 166 (321)
...+.+..+.+
T Consensus 84 Am~~YI~lv~~ 94 (116)
T 2cqu_A 84 ARQNYVDLVSS 94 (116)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77777776654
No 128
>2cop_A Acyl-coenzyme A binding domain containing 6; acyl COA binding protein, COA binding protein, lipid binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=59.73 E-value=14 Score=27.61 Aligned_cols=74 Identities=20% Similarity=0.342 Sum_probs=52.1
Q ss_pred hHHHHHHHHHhhhccCCccccCCCCChhhhHHHHHHhhc------CcHHHHHHHHHHhhhcCCChhhHHHHhcCCCCchh
Q 020810 82 AFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQ------NPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKD 155 (321)
Q Consensus 82 ~~~~maeq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~------np~~~~m~e~l~~~~~~~p~l~~m~~~l~dp~~~~ 155 (321)
.|...++.+.+-.. ..+.-+..++|..++|.+. .|.+..+..+.. |+.|+.+.+.....
T Consensus 11 ~F~~A~~~vk~l~~------~p~~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~~raK---------w~AW~~l~gms~ee 75 (109)
T 2cop_A 11 LFEKAAAHLQGLIQ------VASREQLLYLYARYKQVKVGNCNTPKPSFFDFEGKQK---------WEAWKALGDSSPSQ 75 (109)
T ss_dssp HHHHHHHHHTTSTT------TSCHHHHHHHHHHHHHHHTCSCCSCCCCSSCHHHHHH---------HHHHHSCTTCCHHH
T ss_pred HHHHHHHHHHHccc------CCCHHHHHHHHHHHHHhhcCCCCCCCCCccCHHHHHH---------HHHHHHhcCCCHHH
Confidence 37777777764321 2345566799999999875 677777777665 78888888888888
Q ss_pred HHHHHHHHhhc-CCCh
Q 020810 156 QIEERMAKIKE-DPSL 170 (321)
Q Consensus 156 ~~~~~~~~l~~-~p~~ 170 (321)
...+.+..+.+ .|.+
T Consensus 76 Am~~YI~lv~~l~~~~ 91 (109)
T 2cop_A 76 AMQEYIAVVKKLDPGW 91 (109)
T ss_dssp HHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHhhhh
Confidence 88887777665 4443
No 129
>2cb8_A Acyl-COA-binding protein; acyl-coenzyme A binding protein, fatty acid, acetylation, alternative splicing, lipid-binding, transport; HET: MYA; 1.4A {Homo sapiens} PDB: 2fj9_A 1aca_A* 1hb6_A 1hb8_A 1nti_A 1nvl_A* 2abd_A 2fdq_A
Probab=59.25 E-value=10 Score=27.08 Aligned_cols=70 Identities=14% Similarity=0.259 Sum_probs=48.5
Q ss_pred chHHHHHHHHHhhhccCCccccCCCCChhhhHHHHHHhhc------CcHHHHHHHHHHhhhcCCChhhHHHHhcCCCCch
Q 020810 81 PAFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQ------NPQFMTMAERLGNALMQDPSMSHMMESLTNPTKK 154 (321)
Q Consensus 81 p~~~~maeq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~------np~~~~m~e~l~~~~~~~p~l~~m~~~l~dp~~~ 154 (321)
-.|...++.+.+--. ..+.-+...+|..++|.+. .|.+..+..+.. |+.++.+......
T Consensus 4 ~~F~~A~~~vk~l~~------~~~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~~aK---------w~AW~~l~gms~e 68 (87)
T 2cb8_A 4 AEFEKAAEEVRHLKT------KPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAK---------WDAWNELKGTSKE 68 (87)
T ss_dssp HHHHHHHHHGGGCSS------CCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHH---------HHHHHTTTTCCHH
T ss_pred HHHHHHHHHHHHccC------CcCHHHHHHHHHHHHhhhhCCCCCCCCCcccHHHHHH---------HHHHHHcCCCCHH
Confidence 358888887764321 2345567799999999874 677777777665 7777777777777
Q ss_pred hHHHHHHHHhh
Q 020810 155 DQIEERMAKIK 165 (321)
Q Consensus 155 ~~~~~~~~~l~ 165 (321)
+...+.+..+.
T Consensus 69 eA~~~Yi~~v~ 79 (87)
T 2cb8_A 69 DAMKAYINKVE 79 (87)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77777666543
No 130
>1hbk_A ACBP, acyl-COA binding protein; fatty acid metabolism; HET: COA MYR; 2.0A {Plasmodium falciparum} SCOP: a.11.1.1
Probab=57.59 E-value=26 Score=25.00 Aligned_cols=72 Identities=14% Similarity=0.171 Sum_probs=52.2
Q ss_pred hHHHHHHHHHhhhccCCccccCCCCChhhhHHHHHHhhc------CcHHHHHHHHHHhhhcCCChhhHHHHhcCCCCchh
Q 020810 82 AFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQ------NPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKD 155 (321)
Q Consensus 82 ~~~~maeq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~------np~~~~m~e~l~~~~~~~p~l~~m~~~l~dp~~~~ 155 (321)
.|...++.+.+--. ....+.-+..++|..++|.+. .|.+..+..+.. |+.++.+.+.+...
T Consensus 5 ~F~~A~~~v~~l~~----~~~~~~~~~L~LYalyKQAt~Gd~~~~~Pg~~d~~~~aK---------w~AW~~l~gms~ee 71 (89)
T 1hbk_A 5 VFEECVSFINGLPR----TINLPNELKLDLYKYYKQSTIGNCNIKEPSAHKYIDRKK---------YEAWKSVENLNRED 71 (89)
T ss_dssp HHHHHHHHHHHSCT----TCCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTSHHHHHH---------HHHHHHTTTCCHHH
T ss_pred HHHHHHHHHHhcCC----cCCCCHHHHHHHHHHHHHhhcCCCCCCCCCccCHHhHHH---------HHHHHHhcCCCHHH
Confidence 48888888765321 123445567799999999884 677777777765 78888888888888
Q ss_pred HHHHHHHHhhc
Q 020810 156 QIEERMAKIKE 166 (321)
Q Consensus 156 ~~~~~~~~l~~ 166 (321)
...+.+..+.+
T Consensus 72 A~~~YI~~v~~ 82 (89)
T 1hbk_A 72 AQKRYVDIVSE 82 (89)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88887777654
No 131
>1pve_A HHR23B, UV excision repair protein RAD23 homolog B; XPC binding domain, solution structure, nucleotide excision repair, chaps, DNA binding protein; NMR {Homo sapiens} SCOP: a.189.1.1
Probab=57.58 E-value=8.8 Score=26.48 Aligned_cols=41 Identities=24% Similarity=0.402 Sum_probs=24.3
Q ss_pred CCCCCCChhcHHHHHh-hcCCchHHH-HHHHHh-cCchHHHHHHH
Q 020810 48 VGGAAPNPFDFSAMSG-LLNDPSIKE-LAEQIA-KDPAFNSMAEQ 89 (321)
Q Consensus 48 ~~~~~~~~~~~~~~~~-~~~~p~~~~-~~~~~~-~~p~~~~maeq 89 (321)
+.-|.++| .|..+.+ +-.||++.+ +.++|. +||++.++-.+
T Consensus 6 l~~Lr~~P-qf~qlR~~vqqNP~lL~~lLqqL~~~NPqL~q~I~~ 49 (72)
T 1pve_A 6 LEFLRNQP-QFQQMRQIIQQNPSLLPALLQQIGRENPQLLQQISQ 49 (72)
T ss_dssp TGGGTTCT-TTTTHHHHHTTCGGGHHHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHcCh-HHHHHHHHHHHCHHHHHHHHHHHHhHCHHHHHHHHH
Confidence 45667888 4445544 457997765 555553 58855544333
No 132
>3pk1_B Apoptosis regulator BAX; BCL-2 family fold, regulation of apoptosis, mitochondri apoptosis-apoptosis regulator complex; 2.49A {Homo sapiens} PDB: 3pl7_C 2xa0_C
Probab=56.89 E-value=5 Score=23.13 Aligned_cols=23 Identities=26% Similarity=0.472 Sum_probs=12.3
Q ss_pred hcCCchHHHHHHHHhcCchHHHHHHHHHh
Q 020810 64 LLNDPSIKELAEQIAKDPAFNSMAEQLQK 92 (321)
Q Consensus 64 ~~~~p~~~~~~~~~~~~p~~~~maeq~~~ 92 (321)
++.||++|.++++ +.+++.-+.+
T Consensus 3 ~~~Dp~~K~l~~c------L~~IgDEld~ 25 (34)
T 3pk1_B 3 VPQDASTKKLSEC------LKRIGDELDS 25 (34)
T ss_dssp ----CTHHHHHHH------HHHHHHHHHH
T ss_pred CCCCccHHHHHHH------HHHHHHHHcc
Confidence 5678888888887 4455554443
No 133
>3flv_A Acyl-COA-binding domain-containing protein 5; lipid binding, structural genomics, struct genomics consortium, SGC, lipid-binding, membrane; HET: STE COA; 1.70A {Homo sapiens}
Probab=53.66 E-value=23 Score=26.94 Aligned_cols=72 Identities=17% Similarity=0.197 Sum_probs=50.4
Q ss_pred hHHHHHHHHHhhhccCCccccCCCCChhhhHHHHHHhhc------CcHHHHHHHHHHhhhcCCChhhHHHHhcCCCCchh
Q 020810 82 AFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQ------NPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKD 155 (321)
Q Consensus 82 ~~~~maeq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~------np~~~~m~e~l~~~~~~~p~l~~m~~~l~dp~~~~ 155 (321)
.|...++.+++--.++ ....+.-+..++|..++|.+. .|.+..+..+.. |..|+.+.......
T Consensus 27 ~F~~A~~~Vk~l~~~g--~~~ps~d~~L~LYaLyKQAT~Gd~~~~~Pg~~d~~graK---------w~AW~~l~gmS~ee 95 (119)
T 3flv_A 27 RFEAAVKVIQSLPKNG--SFQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYK---------WDAWSSLGDMTKEE 95 (119)
T ss_dssp HHHHHHHHHHHHHHHS--SCCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHH---------HHHHHHTTTCCHHH
T ss_pred HHHHHHHHHHhCcccC--CCCCCHHHHHHHHHHHHHHhcCCCCCCCCCccCHHHHHH---------HHHHHHccCCCHHH
Confidence 4888888887644322 223455677799999999886 677777777665 77777777777776
Q ss_pred HHHHHHHHh
Q 020810 156 QIEERMAKI 164 (321)
Q Consensus 156 ~~~~~~~~l 164 (321)
.....+..+
T Consensus 96 Am~~YI~~v 104 (119)
T 3flv_A 96 AMIAYVEEM 104 (119)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666666554
No 134
>3epy_A Acyl-COA-binding domain-containing protein 7; acyl-COA binding protein, fatty acid, lipid metabolism, structural genomics; HET: COA PLM; 2.00A {Homo sapiens} SCOP: a.11.1.1
Probab=50.82 E-value=26 Score=25.05 Aligned_cols=69 Identities=14% Similarity=0.197 Sum_probs=47.1
Q ss_pred hHHHHHHHHHhhhccCCccccCCCCChhhhHHHHHHhhc------CcHHHHHHHHHHhhhcCCChhhHHHHhcCCCCchh
Q 020810 82 AFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQ------NPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKD 155 (321)
Q Consensus 82 ~~~~maeq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~------np~~~~m~e~l~~~~~~~p~l~~m~~~l~dp~~~~ 155 (321)
.|...++.+.+--. ..+.-+...+|..++|.+. .|.+..+..+.. |+.|+.+......+
T Consensus 7 ~F~~A~~~vk~l~~------~p~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~~aK---------w~AW~~l~g~s~ee 71 (89)
T 3epy_A 7 DFDRAAEDVRKLKA------RPDDGELKELYGLYKQAIVGDINIACPGMLDLKGKAK---------WEAWNLKKGLSTED 71 (89)
T ss_dssp HHHHHHHHGGGCSS------CCCHHHHHHHHHHHHHHHTCSCCSCCTTTTCHHHHHH---------HHHHHTTTTCCHHH
T ss_pred HHHHHHHHHHHcCC------CcCHHHHHHHHHHHHHHhhCCCCCCCCcccchHHHHH---------HHHHHHhhCCCHHH
Confidence 48888888764321 2334466789999999885 677777777665 77777777777777
Q ss_pred HHHHHHHHhh
Q 020810 156 QIEERMAKIK 165 (321)
Q Consensus 156 ~~~~~~~~l~ 165 (321)
.....+..+.
T Consensus 72 A~~~Yi~~v~ 81 (89)
T 3epy_A 72 ATSAYISKAK 81 (89)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6666665543
No 135
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=50.70 E-value=28 Score=25.80 Aligned_cols=74 Identities=15% Similarity=0.222 Sum_probs=51.1
Q ss_pred chHHHHHHHHHhhhccCCccccCCCCChhhhHHHHHHhhc------CcHHHHHHHHHHhhhcCCChhhHHHHhcCCCCch
Q 020810 81 PAFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQ------NPQFMTMAERLGNALMQDPSMSHMMESLTNPTKK 154 (321)
Q Consensus 81 p~~~~maeq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~------np~~~~m~e~l~~~~~~~p~l~~m~~~l~dp~~~ 154 (321)
-.|...++.+++--.+ +....+.-+..++|..++|.+. .|.+..+..+.. |+.|+.+......
T Consensus 10 ~~F~~A~~~vk~l~~~--g~~~ps~e~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~~~aK---------w~AW~~l~gms~e 78 (106)
T 2wh5_A 10 KQFQAAVSVIQNLPKN--GSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYK---------WDAWNSLGKMSRE 78 (106)
T ss_dssp HHHHHHHHHHHHSCSS--CSCCCCHHHHHHHHHHHHHHHHCSCCSCCCCTTCHHHHHH---------HHHHHTTTTCCHH
T ss_pred HHHHHHHHHHHhcccc--CCCCCCHHHHHHHHHHHhhhccCCCCCCCCCcccHHHHHH---------HHHHHHhcCCCHH
Confidence 3588888888654321 1223455667799999999875 677777776665 7777777777777
Q ss_pred hHHHHHHHHhh
Q 020810 155 DQIEERMAKIK 165 (321)
Q Consensus 155 ~~~~~~~~~l~ 165 (321)
....+.+..+.
T Consensus 79 eA~~~YI~~v~ 89 (106)
T 2wh5_A 79 EAMSAYITEMK 89 (106)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77777766544
No 136
>1st7_A ACBP, acyl-COA-binding protein; four helix bundle, transport protein; NMR {Saccharomyces cerevisiae}
Probab=42.81 E-value=24 Score=25.02 Aligned_cols=69 Identities=17% Similarity=0.261 Sum_probs=45.6
Q ss_pred hHHHHHHHHHhhhccCCccccCCCCChhhhHHHHHHhhc------CcHHHHHHHHHHhhhcCCChhhHHHHhcCCCCchh
Q 020810 82 AFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQ------NPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKD 155 (321)
Q Consensus 82 ~~~~maeq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~------np~~~~m~e~l~~~~~~~p~l~~m~~~l~dp~~~~ 155 (321)
.|...++.+.+-- ...+.-+..++|..++|.+. .|.+..+..+.. |+.++.+.......
T Consensus 4 ~F~~A~~~v~~l~------~~~~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~raK---------w~AW~~l~gms~ee 68 (86)
T 1st7_A 4 LFEEKAKAVNELP------TKPSTDELLELYALYKQATVGDNDKEKPGIFNMKDRYK---------WEAWENLKGKSQED 68 (86)
T ss_dssp HHHHHHHHHTSCS------SCCCHHHHHHHHHHHHHHHHCSCCCCCCCSSCHHHHHH---------HHHHHTTTTTHHHH
T ss_pred HHHHHHHHHHHcc------CCcCHHHHHHHHHHHHHHhhCCCCCCCCCccCHHHHHH---------HHHHHHcCCCCHHH
Confidence 4777777775422 12344567799999999874 677777776664 66777777766666
Q ss_pred HHHHHHHHhh
Q 020810 156 QIEERMAKIK 165 (321)
Q Consensus 156 ~~~~~~~~l~ 165 (321)
...+.+..+.
T Consensus 69 A~~~YI~~v~ 78 (86)
T 1st7_A 69 AEKEYIALVD 78 (86)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6666665543
No 137
>2oee_A UPF0342 protein YHEA; MCSG, structural genomics, PSI-2, protein structure in midwest center for structural genomics, unknown function; HET: MSE; 1.96A {Bacillus subtilis} SCOP: a.281.1.2
Probab=38.46 E-value=52 Score=24.36 Aligned_cols=85 Identities=14% Similarity=0.227 Sum_probs=44.5
Q ss_pred HHHHHHHHHhhhccCCccccCCCCChhhhHHHHHHhhcCcHHHHHHHHHHhhhcCCChhhHHHHhcCCCCchhHHHHHHH
Q 020810 83 FNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKDQIEERMA 162 (321)
Q Consensus 83 ~~~maeq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~np~~~~m~e~l~~~~~~~p~l~~m~~~l~dp~~~~~~~~~~~ 162 (321)
+-..|++|.+.+..+... ..|....+.+..||....+...|...-.+=.... +.+.........++.+...
T Consensus 5 I~d~A~eL~~~I~~s~ey--------~~~~~a~~~i~~d~ea~~l~~~f~~~q~~~~~~q-~~G~~~~~e~~~~~~~l~~ 75 (117)
T 2oee_A 5 FYDVAYDLENALRGSEEF--------TRLKNLYDEVNADESAKRMFENFRDVQLRLQQKQ-MAGEEITQEEVTQAQKTVA 75 (117)
T ss_dssp HHHHHHHHHHHHHTSHHH--------HHHHHHHHHHHHSHHHHHHHHHHHHHCC-------------------CHHHHHH
T ss_pred HHHHHHHHHHHHHhCHHH--------HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-HcCCCCCHHHHHHHHHHHH
Confidence 344566666666554332 3455666678889999999999854222111111 2221112234456666667
Q ss_pred HhhcCCChhHHHHH
Q 020810 163 KIKEDPSLKPILDE 176 (321)
Q Consensus 163 ~l~~~p~~~~~~~~ 176 (321)
.+..+|.+..++..
T Consensus 76 ~i~~~p~v~~y~~A 89 (117)
T 2oee_A 76 LVQQHEKISQLMEA 89 (117)
T ss_dssp HHHTSHHHHHHHHH
T ss_pred HHhcCHHHHHHHHH
Confidence 77778887777665
No 138
>2iaz_A Hypothetical protein SP1372; structural genomics, PSI-2, protei structure initiative; 2.40A {Streptococcus pneumoniae} SCOP: a.281.1.2
Probab=36.76 E-value=43 Score=24.64 Aligned_cols=85 Identities=8% Similarity=0.097 Sum_probs=46.7
Q ss_pred HHHHHHHHHhhhccCCccccCCCCChhhhHHHHHHhhcCcHHHHHHHHHHhhhcCCChhhHHHHhcCCCCchhHHHHHHH
Q 020810 83 FNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKDQIEERMA 162 (321)
Q Consensus 83 ~~~maeq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~np~~~~m~e~l~~~~~~~p~l~~m~~~l~dp~~~~~~~~~~~ 162 (321)
+-..|++|.+.+..+... ..|....+.+..||....+...|...-.+=.... +.+.........++.+...
T Consensus 5 I~d~A~eL~~~I~~s~ey--------~~~~~a~~~i~~d~ea~~l~~~f~~~q~~~~~~q-~~G~~~~~e~~~~~~~l~~ 75 (113)
T 2iaz_A 5 IYDSANELSRGLRGLPEY--------KAVKAAKDAIAADAEASKIFTDYLAFQEEIQKLA-QTGQMPDASFQAKMEGFGK 75 (113)
T ss_dssp HHHHHHHHHHHHHTSHHH--------HHHHHHHHHHHHCHHHHHHHHHHHHHGGGTTTTC-C----CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCHHH--------HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-HcCCCCCHHHHHHHHHHHH
Confidence 344566666666554332 3455666678889999999999854222111111 1111111123455555666
Q ss_pred HhhcCCChhHHHHH
Q 020810 163 KIKEDPSLKPILDE 176 (321)
Q Consensus 163 ~l~~~p~~~~~~~~ 176 (321)
.+..+|.+..++..
T Consensus 76 ~i~~~p~v~~y~~A 89 (113)
T 2iaz_A 76 QIQGNSLLSEFFTK 89 (113)
T ss_dssp HHHTCHHHHHHHHH
T ss_pred HHhCCHHHHHHHHH
Confidence 67778887777765
No 139
>3zr8_X AVR3A11; protein binding, plant pathogen interactions; HET: PGE; 0.90A {Phytophthora capsici}
Probab=31.71 E-value=27 Score=23.22 Aligned_cols=21 Identities=29% Similarity=0.400 Sum_probs=16.2
Q ss_pred hHHHHHHHHhcCchHHHHHHH
Q 020810 69 SIKELAEQIAKDPAFNSMAEQ 89 (321)
Q Consensus 69 ~~~~~~~~~~~~p~~~~maeq 89 (321)
.++.||.+||.||+..+-+=.
T Consensus 7 ~vKklAK~im~D~~~a~~vY~ 27 (65)
T 3zr8_X 7 AVKKMAKAIMADPSKADDVYQ 27 (65)
T ss_dssp HHHHHHHHHHHCGGGHHHHHH
T ss_pred HHHHHHHHHhcCcHHHHHHHH
Confidence 467889999999977766544
No 140
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=28.12 E-value=41 Score=20.02 Aligned_cols=17 Identities=29% Similarity=0.370 Sum_probs=14.2
Q ss_pred HHHHHHcCCHHHHHHHH
Q 020810 233 VHHTASVGDAEGLKNAL 249 (321)
Q Consensus 233 Lh~Aa~~g~~~~v~~Ll 249 (321)
+..||..|+.+.++.|-
T Consensus 17 iyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHTTSCHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHH
Confidence 67889999999988774
No 141
>2pih_A Protein YMCA; regulate community development, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: a.281.1.1
Probab=25.32 E-value=37 Score=26.75 Aligned_cols=85 Identities=14% Similarity=0.180 Sum_probs=44.3
Q ss_pred HHHHHHHHHhhhccCCccccCCCCChhhhHHHHHHhhcCcHHHHHHHHHHhhhcCCChhhHHHHhcC-CCCchhHHHHHH
Q 020810 83 FNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLT-NPTKKDQIEERM 161 (321)
Q Consensus 83 ~~~maeq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~np~~~~m~e~l~~~~~~~p~l~~m~~~l~-dp~~~~~~~~~~ 161 (321)
+-..|++|.+.+..+... ..|+...+.+.+||....++..|...-++-.... +.+... ......++.+..
T Consensus 9 I~d~A~eL~~aI~eseey--------k~yk~A~~~i~~D~eaq~li~eF~~~Q~~~~~~q-~~Gk~~~~~e~~~el~~l~ 79 (151)
T 2pih_A 9 IVQQARNLAKMISETEEV--------DFFKRAEAQINENDKVSTIVNQIKALQKQAVNLK-HYEKHEALKQVEAKIDALQ 79 (151)
T ss_dssp HHHHHHHHHHHHTTBHHH--------HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCHHH--------HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH-HcCCccchHHHHHHHHHHH
Confidence 344566666666544332 3455666678889999999998853211000000 000000 011224445555
Q ss_pred HHhhcCCChhHHHHH
Q 020810 162 AKIKEDPSLKPILDE 176 (321)
Q Consensus 162 ~~l~~~p~~~~~~~~ 176 (321)
..|..+|.+..++..
T Consensus 80 ~~l~~np~V~~y~~A 94 (151)
T 2pih_A 80 EELEEIPVIQEFRDS 94 (151)
T ss_dssp HHHHHSHHHHHHHHH
T ss_pred HHHHcCHHHHHHHHH
Confidence 566667777777665
No 142
>2k7r_A Primosomal protein DNAI; DNAI N-terminal domain, helicase-loading protein, ATP- binding, DNA replication, nucleotide-binding, primosome; NMR {Bacillus subtilis}
Probab=25.01 E-value=54 Score=24.03 Aligned_cols=9 Identities=22% Similarity=0.438 Sum_probs=3.4
Q ss_pred hhcCcHHHH
Q 020810 118 VMQNPQFMT 126 (321)
Q Consensus 118 ~m~np~~~~ 126 (321)
++++|.+..
T Consensus 28 vl~dP~V~~ 36 (106)
T 2k7r_A 28 VMKDQDVQA 36 (106)
T ss_dssp HTTCHHHHH
T ss_pred HHcCHHHHH
Confidence 333333333
No 143
>4g3o_A E3 ubiquitin-protein ligase AMFR; all-helical structure, BAG6; 1.60A {Homo sapiens}
Probab=24.69 E-value=71 Score=20.89 Aligned_cols=34 Identities=26% Similarity=0.339 Sum_probs=23.9
Q ss_pred HHHhcCchHHHHHHHHHhhhccCCccccCCCCChhhhHHHHHH
Q 020810 75 EQIAKDPAFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQ 117 (321)
Q Consensus 75 ~~~~~~p~~~~maeq~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (321)
|.|+-+++...|++|++.-. |+....+...++++
T Consensus 9 ~~~~~~sql~~Mve~V~~mF---------Pqv~~~~I~~DL~r 42 (58)
T 4g3o_A 9 ENLYFQGQLNAMAHQIQEMF---------PQVPYHLVLQDLQL 42 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHC---------TTSCHHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHHHHHHc---------CCCCHHHHHHHHHH
Confidence 44666778899999988765 56666666666653
No 144
>2oeq_A Protein of unknown function, DUF964; helix bundle, structural genomics, PSI-2, protein structure initiative; 2.90A {Geobacillus stearothermophilus} SCOP: a.281.1.2
Probab=24.55 E-value=53 Score=24.69 Aligned_cols=84 Identities=14% Similarity=0.214 Sum_probs=45.0
Q ss_pred HHHHHHHHhhhccCCccccCCCCChhhhHHHHHHhhcCcHHHHHHHHHHhhhcCCChhhHHHHhcCCCCchhHHHHHHHH
Q 020810 84 NSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKDQIEERMAK 163 (321)
Q Consensus 84 ~~maeq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~np~~~~m~e~l~~~~~~~p~l~~m~~~l~dp~~~~~~~~~~~~ 163 (321)
-..|++|.+.+..+.+. ..|....+.+..||....+...|...-.+=. ...+.+.-..+....++.+....
T Consensus 9 ~d~A~eL~~~I~~seEy--------~~~k~A~~~l~~D~ea~~li~~F~~~q~~~q-~~q~~G~~~~~e~~~~l~~l~~~ 79 (122)
T 2oeq_A 9 HALARQLEQAIRASEPF--------QQLKRAYEDVRRDETAYRMFANVRDIQLRLH-EKQMRGAAILPDEIEQAQKAMAL 79 (122)
T ss_dssp HHHHHHHHHHHHHSHHH--------HHHHHHHHHHHTCTTHHHHHHHHHHHHHHHH-HHHHTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCHHH--------HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH-HHHHcCCCCCHHHHHHHHHHHHH
Confidence 34455566666544332 3455566668889999999988853111000 00011111122334555566666
Q ss_pred hhcCCChhHHHHH
Q 020810 164 IKEDPSLKPILDE 176 (321)
Q Consensus 164 l~~~p~~~~~~~~ 176 (321)
+..+|.+..++..
T Consensus 80 l~~n~~v~~~~~A 92 (122)
T 2oeq_A 80 AQQNEKLARLMAL 92 (122)
T ss_dssp HTTSHHHHHHHHH
T ss_pred HhCCHHHHHHHHH
Confidence 7778877777664
No 145
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=24.06 E-value=1.8e+02 Score=26.92 Aligned_cols=47 Identities=23% Similarity=0.316 Sum_probs=30.1
Q ss_pred HHcCCHHHHHHHHHcCCCCCCC--------------CCCCCcHHHHHHHCCCHHHHHHHHH
Q 020810 237 ASVGDAEGLKNALAAGADKDEE--------------DSEGRTALHFACGYGEVKCAQILLE 283 (321)
Q Consensus 237 a~~g~~~~v~~Ll~~g~~~~~~--------------d~~g~TpLh~A~~~g~~~~v~~Ll~ 283 (321)
+..|+...|+..+..|.+++-+ -..|.|.+|+|+++.+-+++..|+.
T Consensus 30 v~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 30 VVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 3457777777777766665332 1246777777777777777766664
No 146
>1oqy_A HHR23A, UV excision repair protein RAD23 homolog A; DNA repair, proteasome-mediated degradation, protein- protein interaction, replication; NMR {Homo sapiens} SCOP: a.5.2.1 a.5.2.1 a.189.1.1 d.15.1.1 PDB: 1qze_A 1tp4_A
Probab=23.50 E-value=44 Score=30.55 Aligned_cols=19 Identities=26% Similarity=0.632 Sum_probs=9.0
Q ss_pred hcCCchHHHHHHHHhcCch
Q 020810 64 LLNDPSIKELAEQIAKDPA 82 (321)
Q Consensus 64 ~~~~p~~~~~~~~~~~~p~ 82 (321)
|.++|+|.+|=+.+.+||+
T Consensus 240 Lr~~pqf~~lR~~vq~nP~ 258 (368)
T 1oqy_A 240 LRDQPQFQNMRQVIQQNPA 258 (368)
T ss_dssp HHHSHHHHHHHHSTTTCTT
T ss_pred HhcChHHHHHHHHHHhChH
Confidence 4444554444444445554
Done!