BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020812
(321 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O74545|YCV6_SCHPO Putative hydrolase C777.06c OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPCC777.06c PE=4 SV=1
Length = 301
Score = 182 bits (462), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 101/250 (40%), Positives = 150/250 (60%), Gaps = 17/250 (6%)
Query: 68 SEIVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEP-GNKNRRLNTSILIRYPGPSGRR- 125
S+++FMGTG S GIP V CLT C C ++ P G KN R NTS+L++ SG R
Sbjct: 6 SKLLFMGTGCSSGIPNVCCLTLEKPTCRTCLASLTPEGRKNNRFNTSVLLQVDDGSGDRP 65
Query: 126 -NILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWT-NNVQRHIPI 183
NILID GK FY SAL+ F + IR +DAVI+TH HADAI G+DDLR+WT +Q + I
Sbjct: 66 KNILIDCGKHFYVSALKHFVEHKIRYLDAVILTHDHADAINGMDDLREWTLGFLQPSVKI 125
Query: 184 YVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKI--TPLPVWHG 240
Y+ R ++V++++ Y+V+ G +V F++ ++PF + D+ I TPLPV HG
Sbjct: 126 YLTERTYKVIERSFPYMVNAKNATGGGSVPTFDFHVFSPDKPFKLDDIDISVTPLPVHHG 185
Query: 241 A---------GYRSLGFRFGNICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHF 291
Y +GFR G++ YISD + +P T ++ ++++DAL+ + S HF
Sbjct: 186 VYFIEGKESQTYFCMGFRVGDMSYISDCNYVPPTTKKLMEGSNVVVVDALKHEPYPS-HF 244
Query: 292 GLPRVDKFLA 301
+ ++F+A
Sbjct: 245 SFKQAEEFIA 254
>sp|Q7MUY1|LIPB_PORGI Octanoyltransferase OS=Porphyromonas gingivalis (strain ATCC
BAA-308 / W83) GN=lipB PE=3 SV=1
Length = 492
Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 116/235 (49%), Gaps = 21/235 (8%)
Query: 71 VFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGNKNRRLNTSILIRYPGPSGRRNILID 130
+ +G+GTS G+P V C C VC ++R TS+LI +G+R ILID
Sbjct: 4 ILLGSGTSTGVPEVGC------HCRVCRSE---DRHDKRTRTSLLI--ITDAGKR-ILID 51
Query: 131 AGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDF 190
F AL GI ++DAV++TH H D +GGLDDLR T R + +Y
Sbjct: 52 CSPDFRQQAL----FAGIDSLDAVLLTHEHFDHVGGLDDLR--TICWHRELAVYAEQNVL 105
Query: 191 EVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAGYRSLGFRF 250
+ ++ +Y+ + PG + +L + + PF V DL + PL + HG LG++
Sbjct: 106 DSIRDRLHYVFRKNP-YPGTPLLKL-CEVKPDMPFQVADLTVEPLRIMHGR-LPILGYKI 162
Query: 251 GNICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRVDKFLAYSGN 305
G + +++D+ +I E L+ C +L ++ LR + +H + + + GN
Sbjct: 163 GEMAFLTDMKDIAAEEIECLKSCRLLFINGLRYRKEHPSHQTIEQAIDTIGQIGN 217
>sp|P16692|PHNP_ECOLI Protein PhnP OS=Escherichia coli (strain K12) GN=phnP PE=1 SV=1
Length = 252
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 99/222 (44%), Gaps = 49/222 (22%)
Query: 78 SEGIPRVSCLTNPSKKCPVCTKAVEPGNKNRRLNTSILIRYPGPSGRRNILIDAGKFFYH 137
++G+P C +C C +A + RR S ++++ LIDAG +
Sbjct: 13 AQGVPAWGC------ECAACARARR-SPQYRRQPCSGVVKF----NDAITLIDAG--LHD 59
Query: 138 SALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDF---EVMK 194
A RW P + ++TH H D + GL LR W V IP+Y + ++ K
Sbjct: 60 LADRWSPG----SFQQFLLTHYHMDHVQGLFPLR-W--GVGDPIPVYGPPDEQGCDDLFK 112
Query: 195 KTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTV---QDLKITPLPVWHGA---GYRSLGF 248
H L+D S + EPF V Q L++TPLP+ H GY L
Sbjct: 113 --HPGLLDFSHTV---------------EPFVVFDLQGLQVTPLPLNHSKLTFGYL-LET 154
Query: 249 RFGNICYISDVSEIPEETYPFLQDC--EILIMDALRPDRSSS 288
+ ++SD + +PE+T FL++ ++++MD P R+ +
Sbjct: 155 AHSRVAWLSDTAGLPEKTLKFLRNNQPQVMVMDCSHPPRADA 196
>sp|Q95Q18|LACB2_CAEEL Beta-lactamase-like protein 2 homolog OS=Caenorhabditis elegans
GN=Y53F4B.39 PE=3 SV=1
Length = 295
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 57/114 (50%), Gaps = 17/114 (14%)
Query: 101 VEPGNKNRRLNTSILIRYPGP------------SGRRNILIDAGK---FFYHSALRWFPA 145
VEP K T IL PGP +G + IL+D G+ Y SAL+ A
Sbjct: 7 VEPIEKLSDAVTRILGHNPGPFTLQGTNTYLLGTGAKKILVDTGEPNVTEYISALKSVLA 66
Query: 146 YGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDF-EVMKKTHY 198
I+ ++ITH H D +GG+D++ D + ++ IPIY RD E +++ HY
Sbjct: 67 STNSHIEYIVITHWHGDHVGGIDNITDEILD-KKKIPIYKMKRDKDEGVERFHY 119
>sp|A8MGK0|RNZ_ALKOO Ribonuclease Z OS=Alkaliphilus oremlandii (strain OhILAs) GN=rnz
PE=3 SV=1
Length = 317
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 112 TSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLR 171
+S++I Y G R IL+D G+ A+R A G ++ID + ITH H D I G+ L
Sbjct: 21 SSLMINYKG----RKILVDCGEG-TQVAIRKMNA-GFKSIDIICITHVHGDHIFGIPGLL 74
Query: 172 DWTNNVQRHIPIYVA 186
N QR P+ +
Sbjct: 75 STMGNSQRLDPVTIV 89
>sp|B2S457|RNZ_TREPS Ribonuclease Z OS=Treponema pallidum subsp. pallidum (strain SS14)
GN=rnz PE=3 SV=1
Length = 310
Score = 39.7 bits (91), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 14/78 (17%)
Query: 112 TSILIRYPGPSGRRNILIDAGKFFYHS----ALRWFPAYGIRTIDAVIITHSHADAIGGL 167
TS+L+R G L DAG+ S +LRW + I A+ I+H+HAD I GL
Sbjct: 24 TSVLLRREG----ELFLFDAGEGTQVSLRRLSLRW------KKISAIFISHTHADHITGL 73
Query: 168 DDLRDWTNNVQRHIPIYV 185
L ++ V R P+Y+
Sbjct: 74 PGLLMLSSQVARSEPLYI 91
>sp|O07896|RNZ_TREPA Ribonuclease Z OS=Treponema pallidum (strain Nichols) GN=rnz PE=3
SV=1
Length = 310
Score = 39.7 bits (91), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 14/78 (17%)
Query: 112 TSILIRYPGPSGRRNILIDAGKFFYHS----ALRWFPAYGIRTIDAVIITHSHADAIGGL 167
TS+L+R G L DAG+ S +LRW + I A+ I+H+HAD I GL
Sbjct: 24 TSVLLRREG----ELFLFDAGEGTQVSLRRLSLRW------KKISAIFISHTHADHITGL 73
Query: 168 DDLRDWTNNVQRHIPIYV 185
L ++ V R P+Y+
Sbjct: 74 PGLLMLSSQVARSEPLYI 91
>sp|Q97IQ6|RNZ_CLOAB Ribonuclease Z OS=Clostridium acetobutylicum (strain ATCC 824 / DSM
792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=rnz PE=3 SV=2
Length = 309
Score = 39.3 bits (90), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 64/136 (47%), Gaps = 20/136 (14%)
Query: 112 TSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLR 171
TS+LI Y G R ILID G+ S A+G + ID + TH HAD + GL L
Sbjct: 21 TSLLISYNG----RKILIDCGEGTQVSMKE--IAWGFKDIDVICFTHYHADHVMGLTGLL 74
Query: 172 DWTNNVQRHIPIYV----AMRDFEVMKKTH----YYLVDTSGIIPGAAVSELQFNIIDEE 223
N R P+ + +R EV+K ++ + I + S+ N +D +
Sbjct: 75 LTIANSGRIDPLTIIGPEGLR--EVVKGLTVVAPFFPYEIELIELDSKCSD---NFLD-K 128
Query: 224 PFTVQDLKITPLPVWH 239
F ++D++I LPV H
Sbjct: 129 VFKIEDVEIFALPVDH 144
>sp|A1S6T3|GLO2_SHEAM Hydroxyacylglutathione hydrolase OS=Shewanella amazonensis (strain
ATCC BAA-1098 / SB2B) GN=gloB PE=3 SV=1
Length = 258
Score = 38.5 bits (88), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 153 AVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAM-RDFEVMKKTHYYLVDTSGI----- 206
AV++TH H D GG++ LRDW + + +Y A+ D+ + VD SG+
Sbjct: 49 AVLLTHHHRDHNGGINQLRDWAKSNGQSFTVYGAVTSDYSDVLCRDGDTVDISGLTSPVR 108
Query: 207 ---IPGAAVSELQFNIIDEEPF 225
+PG + L F ++D F
Sbjct: 109 VLSVPGHTLDHLAF-VVDNALF 129
>sp|Q73LB4|RNZ_TREDE Ribonuclease Z OS=Treponema denticola (strain ATCC 35405 / CIP
103919 / DSM 14222) GN=rnz PE=3 SV=1
Length = 308
Score = 38.1 bits (87), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 14/78 (17%)
Query: 112 TSILIRYPGPSGRRNILIDAGK----FFYHSALRWFPAYGIRTIDAVIITHSHADAIGGL 167
TS+L+R G L D G+ LRW + I+A+ I+H+HAD I GL
Sbjct: 22 TSVLLRREGDL----FLFDCGEGTQVALRRLNLRW------KRINAIFISHTHADHITGL 71
Query: 168 DDLRDWTNNVQRHIPIYV 185
L ++ V R P+Y+
Sbjct: 72 PGLLMLSSQVDREEPLYI 89
>sp|Q0TQN4|RNZ_CLOP1 Ribonuclease Z OS=Clostridium perfringens (strain ATCC 13124 / NCTC
8237 / Type A) GN=rnz PE=3 SV=1
Length = 316
Score = 37.7 bits (86), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 22/189 (11%)
Query: 109 RLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLD 168
R +S+++ + G R IL+D G+ +R G ++ID + I+H H D I GL
Sbjct: 18 RFLSSVVMNFKG----RKILLDCGEG-TQVTMR-VNGTGFKSIDIICISHLHGDHIYGLP 71
Query: 169 DLRDWTNNVQRHIPIYV----AMRD-FEVMKKTHYYLVDTSGIIPGAA-----VSELQFN 218
L N R IY+ +++ E T YL I+ A+ V + +
Sbjct: 72 GLLSTIGNSGRVEDIYIIGPKGIKEVIEGFLITLPYLPYKLNILEDASNLEFMVKKEKME 131
Query: 219 IIDEEPFTVQDLKITPLPVWHGA---GYRSLGFRFGNICYISD--VSEIPEETYPFLQDC 273
+++E+ DL I L + H + GY S R G + ++++P+E + LQ
Sbjct: 132 LVEEDEKISSDLSIKTLELDHSSPCLGY-SFNIRRGRKFNLEKALMNKVPKEVWSKLQRN 190
Query: 274 EILIMDALR 282
E + ++ ++
Sbjct: 191 EEVSLNGVK 199
>sp|A4XU09|GLO2_PSEMY Hydroxyacylglutathione hydrolase OS=Pseudomonas mendocina (strain
ymp) GN=gloB PE=3 SV=1
Length = 257
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 121 PSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWT 174
P RR ++D G L W A+G T+ ++ITH H D +GG++ L+ T
Sbjct: 21 PISRRCAVVDPGDAA--PVLAWLEAHGDWTLSDILITHHHFDHVGGVEQLKKAT 72
>sp|A5MZX7|RNZ_CLOK5 Ribonuclease Z OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555
/ NCIMB 10680) GN=rnz PE=3 SV=1
Length = 303
Score = 37.0 bits (84), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 112 TSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLR 171
T++++ Y G R +LID G+ +L+ + IR ID ++ TH HAD I GL L
Sbjct: 21 TAMIVSYQG----RKLLIDCGEG-TQVSLKIL-GWKIRNIDVILFTHFHADHIAGLPGLL 74
Query: 172 DWTNNVQRHIPIYV 185
N R PI +
Sbjct: 75 LTIANSGRLEPITI 88
>sp|B9E3V3|RNZ_CLOK1 Ribonuclease Z OS=Clostridium kluyveri (strain NBRC 12016) GN=rnz
PE=3 SV=1
Length = 303
Score = 37.0 bits (84), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 112 TSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLR 171
T++++ Y G R +LID G+ +L+ + IR ID ++ TH HAD I GL L
Sbjct: 21 TAMIVSYQG----RKLLIDCGEG-TQVSLKIL-GWKIRNIDVILFTHFHADHIAGLPGLL 74
Query: 172 DWTNNVQRHIPIYV 185
N R PI +
Sbjct: 75 LTIANSGRLEPITI 88
>sp|Q5SLP1|RNSE_THET8 Ribonuclease TTHA0252 OS=Thermus thermophilus (strain HB8 / ATCC
27634 / DSM 579) GN=TTHA0252 PE=1 SV=1
Length = 431
Score = 35.8 bits (81), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 122 SGRRNILIDAGKFFYHSALRWFPAYGI--RTIDAVIITHSHADAIGGLDDL 170
+G R +L+D G F R +G + +DAV++TH+H D +G L L
Sbjct: 21 AGGRRVLLDCGMFQGKEEARNHAPFGFDPKEVDAVLLTHAHLDHVGRLPKL 71
>sp|O07607|YHFI_BACSU Uncharacterized protein YhfI OS=Bacillus subtilis (strain 168)
GN=yhfI PE=4 SV=1
Length = 244
Score = 35.8 bits (81), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 24/166 (14%)
Query: 122 SGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLR------DWTN 175
SG ++L+D G + PA +DAV+++H H D I + L+ +
Sbjct: 26 SGDYSLLVDCGSAVLSKLFGYVPA---EKLDAVVLSHYHHDHIADIGPLQFAKQVGSFLG 82
Query: 176 NVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPL 235
+ +PIY D E +K Y T GI ++P T IT L
Sbjct: 83 KGEHTLPIYGHDADIEQFQKL-TYKTHTKGIA-----------YQPDQPLTAGPFTITFL 130
Query: 236 PVWHGAGYRSLGFRFGN--ICYISDVSEIPEETYPFLQDCEILIMD 279
H ++ G+ + Y +D S + PF +D ++LI +
Sbjct: 131 KTIHPVTCYAMRITDGSHTVVYTAD-SSYQDSFIPFSKDADLLISE 175
>sp|Q6NYF0|LACB2_DANRE Beta-lactamase-like protein 2 OS=Danio rerio GN=lactb2 PE=2 SV=1
Length = 289
Score = 35.8 bits (81), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 122 SGRRNILIDAGKFF---YHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDL 170
+GRR +LIDAG+ Y +LR +I +I+TH H D GG+ D+
Sbjct: 38 TGRRRVLIDAGERAVPEYIVSLREALKQHDTSIQHIIVTHWHHDHTGGVQDI 89
>sp|Q8U053|Y1764_PYRFU UPF0173 metal-dependent hydrolase PF1764 OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GN=PF1764 PE=3 SV=1
Length = 225
Score = 35.4 bits (80), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 65/158 (41%), Gaps = 26/158 (16%)
Query: 122 SGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHI 181
G + ILID F + + +++D +++TH+H D +G D +R
Sbjct: 15 EGSKKILIDP--FLSGNPVASAKPDDFKSVDLILVTHAHGDHLG------DVGTIAKRTG 66
Query: 182 PIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGA 241
VAM D Y V+T G+ G P V +++I +P WH +
Sbjct: 67 AKVVAMYDLANYIAEKYKGVETIGMNYG--------------PTKVDEVEIVQVPAWHSS 112
Query: 242 --GYRSLGFRFGNICYISDVSEI-PEETYPFLQDCEIL 276
G S+G G I + V+ +TY F +D E+
Sbjct: 113 SDGKYSIGNACGYIVKLDGVTIYHAGDTYVF-KDMELF 149
>sp|A6LU82|RNZ_CLOB8 Ribonuclease Z OS=Clostridium beijerinckii (strain ATCC 51743 /
NCIMB 8052) GN=rnz PE=3 SV=1
Length = 308
Score = 35.0 bits (79), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 109 RLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLD 168
R ++ LI Y G R IL+D G+ ++R G ++ID + ITH H D I GL
Sbjct: 18 RFLSATLINYRG----RKILVDCGEG-TQVSMR-ISNTGFKSIDIICITHIHGDHIVGLP 71
Query: 169 DLRDWTNNVQRHIPIYV 185
L N R PI +
Sbjct: 72 GLLGTIGNSGRTEPITI 88
>sp|Q892B5|RNZ_CLOTE Ribonuclease Z OS=Clostridium tetani (strain Massachusetts / E88)
GN=rnz PE=3 SV=2
Length = 312
Score = 34.7 bits (78), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Query: 108 RRLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGL 167
R L+ +IL Y G R ILID G+ S G + ID + ITH H D I GL
Sbjct: 18 RNLSAAIL-NYKG----RKILIDCGEGTQVSM--KISKTGFKNIDIICITHWHGDHIVGL 70
Query: 168 DDLRDWTNNVQRHIPIYV 185
L N R P+ +
Sbjct: 71 PGLLATMGNSGRKEPLTI 88
>sp|Q0ST77|RNZ_CLOPS Ribonuclease Z OS=Clostridium perfringens (strain SM101 / Type A)
GN=rnz PE=3 SV=1
Length = 316
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 32/194 (16%)
Query: 109 RLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLD 168
R +S+++ + G R IL+D G+ ++R G ++ID + I+H H D I GL
Sbjct: 18 RFLSSVVMNFKG----RKILLDCGEG-TQVSMR-VNGTGFKSIDIICISHLHGDHIYGLP 71
Query: 169 DLRDWTNNVQRHIPIYV--------AMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNII 220
L N R IY+ + F + T YL I+ VS+L+F +
Sbjct: 72 GLLSTIGNSGRVEEIYIIGPKGIKEVIDGFLI---TLPYLPYKLNIL--EDVSDLEFMVK 126
Query: 221 DEEPFTVQ-------DLKITPLPVWHGA---GYRSLGFRFGNICYISD--VSEIPEETYP 268
E+ V+ DL I L + H + GY S R G + ++++P+E +
Sbjct: 127 KEKMELVELNEKISSDLSIKTLELDHSSPCLGY-SFNIRRGRKFNVEKALMNKVPKEVWS 185
Query: 269 FLQDCEILIMDALR 282
LQ E + ++ ++
Sbjct: 186 KLQRNEEVSLNRVK 199
>sp|Q54YL3|INT11_DICDI Integrator complex subunit 11 homolog OS=Dictyostelium discoideum
GN=ints11 PE=3 SV=1
Length = 744
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 8/53 (15%)
Query: 123 GRRNILIDAGKFFYHSALRWFPAYG--------IRTIDAVIITHSHADAIGGL 167
G +NI+ D G + R FP + + ID VIITH H D G L
Sbjct: 24 GNKNIMFDCGMHMGMNDARRFPDFSYISKNGQFTKVIDCVIITHFHLDHCGAL 76
>sp|Q182M7|RNZ_CLOD6 Ribonuclease Z OS=Clostridium difficile (strain 630) GN=rnz PE=3
SV=1
Length = 305
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Query: 109 RLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLD 168
R +S+ I Y G R ILID G+ S G + ID + ITH H D I GL
Sbjct: 18 RFLSSVFINYKG----RKILIDCGEGTQVSM--KLKKCGFKDIDLICITHLHGDHIFGLL 71
Query: 169 DLRDWTNNVQR 179
L N R
Sbjct: 72 GLLSTIGNSGR 82
>sp|Q8XKN1|RNZ_CLOPE Ribonuclease Z OS=Clostridium perfringens (strain 13 / Type A)
GN=rnz PE=3 SV=1
Length = 316
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 26/191 (13%)
Query: 109 RLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLD 168
R +S+++ + G R IL+D G+ ++R G ++ID + I+H H D I GL
Sbjct: 18 RFLSSVVMNFNG----RKILLDCGEG-TQVSMR-VNGTGFKSIDIICISHLHGDHIYGLP 71
Query: 169 DLRDWTNNVQRHIPIYV----AMRD-FEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEE 223
L N R IY+ +++ E T YL I+ A S L+F + E+
Sbjct: 72 GLLSTIGNSGRVEDIYIIGPNGIKEVIEGFLITLPYLPYKLNILEDA--SNLEFMVKKEK 129
Query: 224 PFTVQ-------DLKITPLPVWHGA---GYRSLGFRFGNICYISD--VSEIPEETYPFLQ 271
V+ DL I L + H + GY S R G + ++++P+E + LQ
Sbjct: 130 IELVELNEKISSDLTIETLGLDHSSPCLGY-SFNIRRGRKFNVEKALMNKVPKELWSKLQ 188
Query: 272 DCEILIMDALR 282
E + ++ ++
Sbjct: 189 RNEEVSLNGVK 199
>sp|B6YXJ1|Y1314_THEON UPF0173 metal-dependent hydrolase TON_1314 OS=Thermococcus
onnurineus (strain NA1) GN=TON_1314 PE=3 SV=1
Length = 224
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 28/130 (21%)
Query: 152 DAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAA 211
D ++ITH+H D IG D +R VAM D YLV+ + PG
Sbjct: 42 DLILITHAHGDHIG------DAVEIAKRTGAKIVAMYDIA------NYLVENN---PGIT 86
Query: 212 VSELQFNIIDEEPFTVQDLKITPLPVWHGAGYRSLGFRFGNIC-YISDVSEI----PEET 266
+ + P V +KI +P WH + + GN C Y+ ++ + +T
Sbjct: 87 TIGMNYG-----PTEVDGVKIVQVPAWHSSSDGK--YSIGNACGYVIELDGVKIYHAGDT 139
Query: 267 YPFLQDCEIL 276
+ F +D E+L
Sbjct: 140 FVF-KDMELL 148
>sp|P10425|BLA2_BAC17 Beta-lactamase 2 OS=Bacillus sp. (strain 170) PE=1 SV=1
Length = 257
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Query: 149 RTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHY 198
+ + VIITH+HAD IGG+ L++ R I + E+ KK+ Y
Sbjct: 107 KRVTDVIITHAHADRIGGITALKE------RGIKAHSTALTAELAKKSGY 150
>sp|O13794|YSH1_SCHPO Endoribonuclease ysh1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ysh1 PE=3 SV=2
Length = 757
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 115 LIRYPGPSGRRNILIDAG---KFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLR 171
+I+Y G + +++DAG + SAL +F + + T+D ++I+H H D + L +
Sbjct: 36 VIQYKG----KTVMLDAGVHPAYTGLSALPFFDEFDLSTVDVLLISHFHLDHVASLPYVM 91
Query: 172 DWTN 175
TN
Sbjct: 92 QKTN 95
>sp|C4Z309|RNZ_EUBE2 Ribonuclease Z OS=Eubacterium eligens (strain ATCC 27750 / VPI
C15-48) GN=rnz PE=3 SV=1
Length = 304
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 65/158 (41%), Gaps = 33/158 (20%)
Query: 109 RLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLD 168
R TS++ RY G S ++ID G+ + + + ID + TH HAD I GL
Sbjct: 18 RWLTSLMTRYNGSS----LMIDCGEGTQIAVKQ--KGWSFNPIDVICFTHYHADHISGLP 71
Query: 169 DLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQ 228
L N R P+ LV G+ G VS L+ I E PF ++
Sbjct: 72 GLLLTIGNSDRKKPL---------------TLVGPKGL--GRVVSSLRV-IAPELPFELK 113
Query: 229 DLKIT----PLPVWHGAGYRSLGFRFGN--ICYISDVS 260
+++T L + GY FR + ICY +S
Sbjct: 114 FIELTNQQEHLSI---CGYEIDAFRVNHAVICYGYSIS 148
>sp|P04190|BLA2_BACCE Beta-lactamase 2 OS=Bacillus cereus GN=blm PE=1 SV=1
Length = 257
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 149 RTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHY 198
+ + VIITH+HAD IGG+ L+ +R I + E+ KK Y
Sbjct: 107 KRVTDVIITHAHADRIGGIKTLK------ERGIKAHSTALTAELAKKNGY 150
>sp|C4ZFN9|RNZ_EUBR3 Ribonuclease Z OS=Eubacterium rectale (strain ATCC 33656 / VPI
0990) GN=rnz PE=3 SV=1
Length = 303
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 107 NRRLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGG 166
NR L T++ ++Y G NILID G+ A++ + ID + ITH HAD I G
Sbjct: 17 NRWL-TALSLKYNGS----NILIDCGEG-TQIAMKE-AGINFKPIDILCITHFHADHISG 69
Query: 167 LDDLRDWTNNVQRHIPIYV 185
L L N +R P+ +
Sbjct: 70 LPGLLLTMGNAERTEPLTI 88
>sp|P14488|BLAB_BACCE Beta-lactamase 2 OS=Bacillus cereus PE=1 SV=1
Length = 256
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 149 RTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHY 198
+ + VIITH+HAD IGG+ L+ +R I + E+ KK Y
Sbjct: 106 KRVTDVIITHAHADRIGGMKTLK------ERGIKAHSTALTAELAKKNGY 149
>sp|B2V377|RNZ_CLOBA Ribonuclease Z OS=Clostridium botulinum (strain Alaska E43 / Type
E3) GN=rnz PE=3 SV=1
Length = 315
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 125 RNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQR 179
R ILID G+ A+R +G ++ID + ITHSH D GL L N R
Sbjct: 30 RKILIDCGEG-TQVAMREI-GWGFKSIDLICITHSHGDHTIGLPGLLSTMGNSGR 82
>sp|B7VIP5|GLO2_VIBSL Hydroxyacylglutathione hydrolase OS=Vibrio splendidus (strain
LGP32) GN=gloB PE=3 SV=1
Length = 252
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 122 SGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDL 170
S RR ++D G + + + A+ T+DA++ITH H D IGG+ +L
Sbjct: 21 SDRRCAVVDPGDA---APVLEYLAHHELTLDAILITHHHHDHIGGVPEL 66
>sp|Q0C639|HIS4_HYPNA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Hyphomonas
neptunium (strain ATCC 15444) GN=hisA PE=3 SV=1
Length = 241
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 9/58 (15%)
Query: 188 RDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAGYRS 245
R F M TH ++VD +G GA V+ I LK TP PV G G R+
Sbjct: 39 RAFHAMGFTHLHVVDLNGAFAGAPVNRAAVEGI---------LKATPAPVQLGGGIRT 87
>sp|Q3AYI2|GLO2_SYNS9 Hydroxyacylglutathione hydrolase OS=Synechococcus sp. (strain
CC9902) GN=gloB PE=3 SV=1
Length = 251
Score = 33.1 bits (74), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Query: 141 RWFPAYGIRTIDAVIITHSHADAIGGLDD-LRDW 173
+W A+G+ + A++ TH HAD IGG D LR+W
Sbjct: 38 QWLNAHGM-CLRAILQTHHHADHIGGTPDLLREW 70
>sp|A2C7W3|GLO2_PROM3 Hydroxyacylglutathione hydrolase OS=Prochlorococcus marinus (strain
MIT 9303) GN=gloB PE=3 SV=1
Length = 260
Score = 33.1 bits (74), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Query: 150 TIDAVIITHSHADAIGG-LDDLRDWTN 175
++ AV+ TH HAD IGG L+ LRDW N
Sbjct: 58 SLAAVLQTHHHADHIGGTLELLRDWPN 84
>sp|Q46CE2|MUTS_METBF DNA mismatch repair protein MutS OS=Methanosarcina barkeri (strain
Fusaro / DSM 804) GN=mutS PE=3 SV=1
Length = 900
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Query: 239 HGAGYRSLGFRFGNICYISDVSEIPEETY----PFLQDCEILIMDALRPDRSSSTHFGLP 294
H + R G + ++D++E+ E DC+ILI D P ++ H G
Sbjct: 560 HSRELQETAERIGTLDVLTDLAEVAENNNYIRPQLTDDCKILIRDGRHPVVENTVHGGFV 619
Query: 295 RVDKFLAYSGNQFTL 309
D + NQF L
Sbjct: 620 PNDTEMDCKENQFLL 634
>sp|Q7V6G8|GLO2_PROMM Hydroxyacylglutathione hydrolase OS=Prochlorococcus marinus (strain
MIT 9313) GN=gloB PE=3 SV=1
Length = 260
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Query: 150 TIDAVIITHSHADAIGG-LDDLRDWTN 175
++ AV+ TH HAD IGG L+ LRDW N
Sbjct: 58 SLAAVLQTHHHADHIGGTLELLRDWPN 84
>sp|A7MY07|GLO2_VIBHB Hydroxyacylglutathione hydrolase OS=Vibrio harveyi (strain ATCC
BAA-1116 / BB120) GN=gloB PE=3 SV=1
Length = 252
Score = 32.7 bits (73), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 122 SGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDL 170
S +R ++D G L + A + T++A++ITH H D IGG+ DL
Sbjct: 21 SDKRCAVVDPGD--AKPVLEYLQANEL-TLEAILITHHHNDHIGGVSDL 66
>sp|Q12MM2|GLO2_SHEDO Hydroxyacylglutathione hydrolase OS=Shewanella denitrificans
(strain OS217 / ATCC BAA-1090 / DSM 15013) GN=gloB PE=3
SV=1
Length = 258
Score = 32.7 bits (73), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 154 VIITHSHADAIGGLDDLRDWTNNVQRHIPIY 184
V+ITH HAD +GG+ L+D+ Q +P+Y
Sbjct: 51 VLITHKHADHVGGIQGLQDF---YQNSLPVY 78
>sp|B9KYQ3|RNZ_THERP Ribonuclease Z OS=Thermomicrobium roseum (strain ATCC 27502 / DSM
5159 / P-2) GN=rnz PE=3 SV=1
Length = 303
Score = 32.7 bits (73), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 8/60 (13%)
Query: 109 RLNTSILIRYPGPSGRRNILIDAGKFFYHSALRW-FPAYGIRTIDAVIITHSHADAIGGL 167
R +++L+R G +L+D G+ + + W + + R +DA++ TH HAD + GL
Sbjct: 18 RWLSALLVRCEG----HVVLLDCGE---GTQISWRYTGWSFRDLDAIVFTHLHADHVAGL 70
>sp|Q4WRC2|YSH1_ASPFU Endoribonuclease ysh1 OS=Neosartorya fumigata (strain ATCC MYA-4609
/ Af293 / CBS 101355 / FGSC A1100) GN=ysh1 PE=3 SV=1
Length = 872
Score = 32.7 bits (73), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 67/167 (40%), Gaps = 31/167 (18%)
Query: 115 LIRYPGPSGRRNILIDAGKFFYH---SALRWFPAYGIRTIDAVIITHSHADAIGGLDDLR 171
+I+Y G + +++DAG SAL +F + + T+D ++I+H H D L +
Sbjct: 42 IIQYKG----KTVMLDAGMHPAKEGFSALPFFDEFDLSTVDILLISHFHVDHSSALPYVL 97
Query: 172 DWTN--------NVQRHIPIYVAMRDFEV--------MKKTHYYLVDTSGIIPGAAVSEL 215
TN + + I ++ + V + T Y D +P + +
Sbjct: 98 SKTNFKGRVFMTHATKAIYKWLIQDNVRVSNTASSSDQRTTLYTEHDHLSTLP--LIETI 155
Query: 216 QFNIIDEEPFTVQDLKITPLPVWH--GAGYRSLGFRFGNICYISDVS 260
FN TV ++ITP P H GA + NI + D S
Sbjct: 156 DFNTT----HTVNSIRITPFPAGHVLGAAMFLISIAGLNILFTGDYS 198
>sp|Q5XGR8|LACB2_XENLA Beta-lactamase-like protein 2 OS=Xenopus laevis GN=lactb2 PE=2 SV=1
Length = 287
Score = 32.3 bits (72), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 122 SGRRNILIDAGKFF---YHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDL 170
+G R ILID G+ Y S L+ +I +I+TH H D +GG+ D+
Sbjct: 39 TGSRRILIDTGEPAVPEYISCLKQALIEFNTSIQEIIVTHWHVDHVGGIADI 90
>sp|Q6N8F6|PQQB_RHOPA Coenzyme PQQ synthesis protein B OS=Rhodopseudomonas palustris
(strain ATCC BAA-98 / CGA009) GN=pqqB PE=3 SV=1
Length = 308
Score = 32.3 bits (72), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 55/147 (37%), Gaps = 25/147 (17%)
Query: 70 IVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGNKNRRL--------NTSILIRYPGP 121
++ +G G+P+ +C CPVC A++ R N + P
Sbjct: 4 VIVLGAAAGGGVPQWNC------GCPVCRAALDDPRLARTQASLAISADNAHWFLINASP 57
Query: 122 SGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHI 181
R+ I+ ALR P G VI+T+ DA+ GL +R+ +
Sbjct: 58 DLRQQIVATPQLHPRAGALRHSPIAG------VILTNGEVDAVAGLLSMREGSP-----F 106
Query: 182 PIYVAMRDFEVMKKTHYYLVDTSGIIP 208
IY + +++ + V I+P
Sbjct: 107 SIYAHDKVLAILRANSIFNVLNESIVP 133
>sp|Q0V9A9|LACB2_XENTR Beta-lactamase-like protein 2 OS=Xenopus tropicalis GN=lactb2 PE=2
SV=1
Length = 289
Score = 32.3 bits (72), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 122 SGRRNILIDAGKFF---YHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDL 170
+G R ILID G+ Y S L+ +I +I+TH H D +GG+ D+
Sbjct: 39 TGPRRILIDTGEPAVPEYISCLKQALTEFNTSIQEIIVTHWHVDHVGGIADI 90
>sp|Q8TWK0|RNZ_METKA Ribonuclease Z OS=Methanopyrus kandleri (strain AV19 / DSM 6324 /
JCM 9639 / NBRC 100938) GN=rnz PE=3 SV=1
Length = 279
Score = 32.0 bits (71), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 109 RLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGL 167
R + +L+ + G +LID G+ A+ I +DAV++TH H D + GL
Sbjct: 21 RSHPGLLVEFSGT----KLLIDCGEGTQRRAMEQ--GVTIHDVDAVLLTHHHVDHVAGL 73
>sp|Q9HN60|RNZ_HALSA Ribonuclease Z OS=Halobacterium salinarum (strain ATCC 700922 / JCM
11081 / NRC-1) GN=rnz PE=3 SV=1
Length = 308
Score = 32.0 bits (71), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 13/82 (15%)
Query: 107 NRRLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGG 166
R +S+ +R G + L DAG+ +R+ +G+ V ITH H D + G
Sbjct: 17 TERNPSSVFVRRNGDA----FLFDAGEATQRQMMRYKTGFGVSD---VFITHGHGDHVFG 69
Query: 167 LD------DLRDWTNNVQRHIP 182
L D D T+ + H+P
Sbjct: 70 LPGLVHTWDFNDRTDPLTIHVP 91
>sp|B0R7E2|RNZ_HALS3 Ribonuclease Z OS=Halobacterium salinarum (strain ATCC 29341 / DSM
671 / R1) GN=rnz PE=3 SV=1
Length = 308
Score = 32.0 bits (71), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 13/82 (15%)
Query: 107 NRRLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGG 166
R +S+ +R G + L DAG+ +R+ +G+ V ITH H D + G
Sbjct: 17 TERNPSSVFVRRNGDA----FLFDAGEATQRQMMRYKTGFGVSD---VFITHGHGDHVFG 69
Query: 167 LD------DLRDWTNNVQRHIP 182
L D D T+ + H+P
Sbjct: 70 LPGLVHTWDFNDRTDPLTIHVP 91
>sp|Q6C2Z7|YSH1_YARLI Endoribonuclease YSH1 OS=Yarrowia lipolytica (strain CLIB 122 / E
150) GN=YSH1 PE=3 SV=2
Length = 827
Score = 31.6 bits (70), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 125 RNILIDAGKFFYHSALRWFPAYG---IRTIDAVIITHSHADAIGGLDDLRDWTN 175
+ I++DAG HS L P Y + TID ++I+H H D L + TN
Sbjct: 60 KTIMLDAGVHPAHSGLASLPFYDEFDLSTIDILLISHFHLDHAASLPYVMQKTN 113
>sp|Q21C03|GLO2_RHOPB Hydroxyacylglutathione hydrolase OS=Rhodopseudomonas palustris
(strain BisB18) GN=gloB PE=3 SV=1
Length = 255
Score = 31.6 bits (70), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 19/26 (73%)
Query: 150 TIDAVIITHSHADAIGGLDDLRDWTN 175
T+ +++TH HAD IGG+ +L+ TN
Sbjct: 48 TLTDILVTHHHADHIGGIAELKQATN 73
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 122,520,426
Number of Sequences: 539616
Number of extensions: 5256885
Number of successful extensions: 10997
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 10962
Number of HSP's gapped (non-prelim): 64
length of query: 321
length of database: 191,569,459
effective HSP length: 117
effective length of query: 204
effective length of database: 128,434,387
effective search space: 26200614948
effective search space used: 26200614948
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)