Query 020812
Match_columns 321
No_of_seqs 357 out of 2487
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 08:32:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020812.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020812hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3md7_A Beta-lactamase-like; ss 100.0 3.5E-38 1.2E-42 287.2 26.0 238 61-316 22-267 (293)
2 3jxp_A Coenzyme PQQ synthesis 100.0 2.4E-38 8.1E-43 291.6 16.3 229 68-316 3-276 (321)
3 3g1p_A Protein PHNP; C-P lyase 100.0 1.4E-35 4.9E-40 265.1 17.8 214 67-315 2-226 (258)
4 2cbn_A Ribonuclease Z; phospho 100.0 3.9E-31 1.3E-35 241.6 21.5 212 68-316 2-276 (306)
5 1y44_A Ribonuclease Z; zinc-de 100.0 1.6E-30 5.4E-35 239.1 20.9 210 68-315 1-273 (320)
6 3zwf_A Zinc phosphodiesterase 100.0 5.7E-30 2E-34 240.0 21.8 208 68-316 1-316 (368)
7 1zkp_A Hypothetical protein BA 100.0 7.5E-29 2.6E-33 222.4 22.5 205 64-316 21-240 (268)
8 2e7y_A TRNAse Z; tRNA maturati 99.9 7E-25 2.4E-29 197.2 17.7 185 112-315 13-248 (280)
9 2az4_A Hypothetical protein EF 99.9 1.1E-22 3.6E-27 194.4 20.5 207 66-315 5-263 (429)
10 3kl7_A Putative metal-dependen 99.9 1.5E-21 5E-26 171.9 18.1 159 113-314 39-212 (235)
11 3iek_A Ribonuclease TTHA0252; 99.9 1.8E-21 6.2E-26 185.9 18.3 193 111-313 14-224 (431)
12 2wyl_A L-ascorbate-6-phosphate 99.9 2.5E-20 8.7E-25 174.0 22.7 183 113-314 47-284 (360)
13 3bv6_A Metal-dependent hydrola 99.9 3.5E-20 1.2E-24 174.2 21.5 183 113-314 71-309 (379)
14 3rpc_A Possible metal-dependen 99.8 8.6E-21 2.9E-25 169.7 14.3 176 112-314 13-229 (264)
15 2i7t_A Cleavage and polyadenyl 99.8 2.6E-20 8.9E-25 179.4 18.7 189 65-295 9-217 (459)
16 3bk2_A RNAse J, metal dependen 99.8 2.5E-20 8.7E-25 183.6 18.7 188 111-315 30-250 (562)
17 3af5_A Putative uncharacterize 99.8 8.1E-20 2.8E-24 182.8 18.4 211 64-313 185-432 (651)
18 2ycb_A Beta-CAsp RNAse, cleava 99.8 1.5E-19 5.3E-24 180.4 19.8 208 64-312 176-416 (636)
19 2xr1_A Cleavage and polyadenyl 99.8 1.3E-19 4.4E-24 181.0 16.0 208 65-313 181-420 (640)
20 3zq4_A Ribonuclease J 1, RNAse 99.8 6.3E-19 2.1E-23 173.1 20.3 183 111-315 22-234 (555)
21 2i7x_A Protein CFT2; polyadeny 99.8 3E-19 1E-23 179.8 17.6 186 110-302 14-236 (717)
22 1vjn_A Zn-dependent hydrolase 99.8 4.5E-19 1.5E-23 154.5 16.4 151 108-316 17-178 (220)
23 3aj3_A MLR6805 protein, 4-pyri 99.8 1.2E-18 4.2E-23 156.1 9.0 170 66-263 2-212 (274)
24 3dha_A N-acyl homoserine lacto 99.7 5.4E-18 1.9E-22 150.2 11.1 164 66-263 6-200 (254)
25 2r2d_A AGR_PTI_140P, Zn-depend 99.7 2.1E-18 7.3E-23 154.6 7.4 218 69-312 4-260 (276)
26 2p4z_A Metal-dependent hydrola 99.7 5.1E-17 1.7E-21 146.8 11.6 189 110-314 32-258 (284)
27 4b87_A DNA cross-LINK repair 1 99.7 1.7E-16 5.7E-21 148.2 15.2 141 123-298 35-183 (367)
28 3esh_A Protein similar to meta 99.7 4.9E-18 1.7E-22 152.9 3.4 185 64-262 2-210 (280)
29 2zwr_A Metallo-beta-lactamase 99.7 1.9E-16 6.5E-21 136.1 12.1 131 111-262 13-148 (207)
30 3adr_A Putative uncharacterize 99.7 5.5E-16 1.9E-20 137.6 14.5 177 109-313 18-209 (261)
31 1p9e_A Methyl parathion hydrol 99.7 1.6E-17 5.3E-22 153.4 4.4 185 59-263 46-260 (331)
32 2xf4_A Hydroxyacylglutathione 99.6 2E-15 6.9E-20 129.7 13.4 139 111-262 13-155 (210)
33 2bib_A CBPE, teichoic acid pho 99.6 2.7E-15 9.2E-20 147.4 15.6 177 112-310 19-251 (547)
34 1k07_A FEZ-1 beta-lactamase; m 99.6 2.6E-15 8.9E-20 133.7 14.0 140 111-261 25-177 (263)
35 3m8t_A 'BLR6230 protein; subcl 99.6 2.8E-15 9.4E-20 135.4 14.2 138 111-260 55-204 (294)
36 1ztc_A Hypothetical protein TM 99.6 3.3E-16 1.1E-20 136.1 6.5 158 66-262 11-178 (221)
37 4efz_A Metallo-beta-lactamase 99.6 5.3E-15 1.8E-19 134.3 14.6 140 111-262 17-178 (298)
38 3l6n_A Metallo-beta-lactamase; 99.6 2.4E-15 8.1E-20 130.0 10.9 125 110-261 30-161 (219)
39 3zdk_A 5' exonuclease apollo; 99.6 9.9E-15 3.4E-19 134.5 15.6 163 124-313 9-184 (336)
40 2qed_A Hydroxyacylglutathione 99.6 8.2E-15 2.8E-19 130.5 14.0 118 111-261 19-137 (258)
41 3q6v_A Beta-lactamase; metallo 99.6 1.3E-14 4.4E-19 126.4 13.2 137 111-262 26-172 (233)
42 2y8b_A Metallo-B-lactamase; hy 99.6 4.7E-15 1.6E-19 132.4 10.6 162 59-262 34-201 (265)
43 3hnn_A Putative diflavin flavo 99.6 5.7E-15 1.9E-19 131.6 10.5 125 111-259 43-175 (262)
44 1qh5_A Glyoxalase II, protein 99.6 1.9E-14 6.6E-19 128.2 13.8 118 111-261 12-137 (260)
45 1a7t_A Metallo-beta-lactamase; 99.6 6.9E-15 2.4E-19 128.5 10.4 124 111-261 37-167 (232)
46 1sml_A Protein (penicillinase) 99.6 2.4E-14 8.3E-19 127.8 13.8 138 111-261 38-187 (269)
47 1xm8_A Glyoxalase II; structur 99.6 2.2E-14 7.7E-19 127.3 13.3 120 111-261 12-134 (254)
48 1m2x_A Class B carbapenemase B 99.6 1.7E-14 6E-19 125.1 11.8 125 110-261 26-157 (223)
49 4ax1_B Metallo-beta-lactamase 99.6 4.5E-14 1.5E-18 127.7 14.9 140 111-261 58-209 (303)
50 2zo4_A Metallo-beta-lactamase 99.6 2.1E-14 7.3E-19 131.0 12.7 140 109-261 20-193 (317)
51 1e5d_A Rubredoxin\:oxygen oxid 99.6 2E-14 6.8E-19 135.6 12.8 127 110-260 34-167 (402)
52 4ad9_A Lactb2, beta-lactamase- 99.6 5.6E-14 1.9E-18 126.8 14.8 131 108-260 29-167 (289)
53 2ohh_A Type A flavoprotein FPR 99.6 2.6E-14 9E-19 134.8 13.1 128 111-260 35-172 (404)
54 2p18_A Glyoxalase II; metallop 99.6 4.8E-14 1.6E-18 128.8 14.3 125 111-261 40-183 (311)
55 2gcu_A Putative hydroxyacylglu 99.5 3.3E-14 1.1E-18 125.6 12.5 122 110-262 14-146 (245)
56 2vw8_A PA1000, PQSE; quinolone 99.5 2.5E-14 8.7E-19 129.9 12.0 141 111-260 24-182 (303)
57 1ycg_A Nitric oxide reductase; 99.5 2.9E-14 9.8E-19 134.3 12.2 127 110-260 35-168 (398)
58 4dik_A Flavoprotein; TM0755, e 99.5 7.5E-14 2.6E-18 132.0 14.7 125 112-260 53-182 (410)
59 1mqo_A Beta-lactamase II; alph 99.5 2E-14 6.9E-19 125.1 9.5 125 110-261 40-171 (227)
60 4hl2_A Beta-lactamase NDM-1; s 99.5 8.9E-15 3E-19 128.7 6.8 133 109-261 46-184 (243)
61 3tp9_A Beta-lactamase and rhod 99.5 4.9E-14 1.7E-18 136.0 11.9 125 111-260 16-151 (474)
62 1jjt_A IMP-1 metallo beta-lact 99.5 3.5E-14 1.2E-18 123.8 9.6 123 110-261 32-161 (228)
63 3iog_A Beta-lactamase; hydrola 99.5 4.7E-14 1.6E-18 122.3 10.3 135 111-261 23-168 (227)
64 2fhx_A SPM-1; metallo-beta-lac 99.5 1.7E-13 5.7E-18 120.5 10.3 139 111-261 30-187 (246)
65 3r2u_A Metallo-beta-lactamase 99.5 2E-13 6.9E-18 131.5 11.6 126 111-261 37-172 (466)
66 2q9u_A A-type flavoprotein; fl 99.5 1.8E-13 6.3E-18 129.6 11.0 127 110-260 40-173 (414)
67 4eyb_A Beta-lactamase NDM-1; m 99.5 6.9E-14 2.4E-18 125.2 7.1 132 111-261 75-211 (270)
68 2cfu_A SDSA1; SDS-hydrolase, l 99.3 7.5E-12 2.5E-16 125.2 12.2 145 111-261 123-302 (658)
69 2p97_A Hypothetical protein; p 99.3 4.8E-12 1.6E-16 108.0 8.7 119 109-262 22-141 (201)
70 2yhe_A SEC-alkyl sulfatase; hy 98.6 1.8E-11 6.3E-16 122.0 0.0 144 111-260 133-312 (668)
71 3h3e_A Uncharacterized protein 98.7 1.9E-08 6.5E-13 89.4 7.3 62 111-190 32-93 (267)
No 1
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=100.00 E-value=3.5e-38 Score=287.25 Aligned_cols=238 Identities=28% Similarity=0.510 Sum_probs=192.2
Q ss_pred cCCCCCceEEEEEcccCCCCcccccccCCCCCCCcccccccCCCCCCcccccEEEEEecCCCCC--ceEEEecCCCchHH
Q 020812 61 VQLPAQQSEIVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGNKNRRLNTSILIRYPGPSGR--RNILIDAGKFFYHS 138 (321)
Q Consensus 61 ~~~~~~~~~i~~LGtG~s~g~P~~~~~~~~~~~c~~c~~~~~~~~~~~r~~ss~lI~~~~~~~~--~~iLID~G~~~~~~ 138 (321)
.....+.|+|+|||||++.|+|.++| .|++|.+++ +++.|+++|++|+..+ .++ ..+|||||++...+
T Consensus 22 ~~~~~~~m~v~~LG~g~~~G~P~~~c------~c~~C~~~~---~~~~R~~~s~li~~~~-~~g~~~~iLID~G~~~~~~ 91 (293)
T 3md7_A 22 MTSPRNCLRFTLLGCGSSPGVPRING------DWGKCDPKN---PKNRRRRASLLVERYD-AEGNNTVVVIDTGPDFRMQ 91 (293)
T ss_dssp --CCCSEEEEEEEECBCTTCBSCTTC------CCTTSCTTC---GGGCBCBCEEEEEEEC-TTCCEEEEEECCCTTHHHH
T ss_pred cccCCCcEEEEEEeecCCCCcccCCC------CCccCCccC---CCCcccccEEEEEecC-CCCceeEEEEECCccHHHH
Confidence 34556789999999999999999999 999999974 5688999999999311 133 69999999998777
Q ss_pred HHhhcccCCCCCccEEEecCCchhhhcChHHHHHhhccccccccEEechhhHHHHHhhccccccccCCCCCCCccceeeE
Q 020812 139 ALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFN 218 (321)
Q Consensus 139 l~~~l~~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (321)
+.+ .++.+|++|||||.|.||++|++.++........+++||+++.+.+.+++.+.+.+.... .....+.+++.
T Consensus 92 l~~----~~~~~id~IliTH~H~DHi~Gl~~l~~~~~~~~~~~~vy~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~ 165 (293)
T 3md7_A 92 MID----SGVHMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDTFGYCFETPV--GSSYPPILSMH 165 (293)
T ss_dssp HHH----HTCCCCSEEECSCCCHHHHTTGGGGHHHHHHHTSCEEEEECHHHHHHHHHHCGGGTSCCT--TCCCCCCEEEE
T ss_pred HHh----cCCCcccEEEEcCCCchhhCCHHHHHHHhhcCCCceEEEECHHHHHHHHHhhhhhhcccc--ccCCCCceEEE
Confidence 665 355799999999999999999998876432234579999999999988876654433210 00111234566
Q ss_pred EeC-CceEEECC----EEEEEEEeccCCCceEEEEEEccEEEeCCCCCCCcchhhhcCCCCEEEEcccCCCCCCCCCCCH
Q 020812 219 IID-EEPFTVQD----LKITPLPVWHGAGYRSLGFRFGNICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGL 293 (321)
Q Consensus 219 ~~~-~~~~~~~~----~~v~~~p~~H~~g~~s~g~~i~~i~ysGDt~~~~~~~~~~~~~~dlli~ea~~~~~~~~~H~~~ 293 (321)
.++ ++.+++++ ++|+++++.|... .++||++++++|+||+...++++.+.++++|+|++|+++.. .++.|+++
T Consensus 166 ~l~~g~~~~~g~~~~~~~v~~~~~~H~~~-~~~g~~i~~~~y~gDt~~~~~~~~~~~~~~Dlli~e~~~~~-~~~~H~~~ 243 (293)
T 3md7_A 166 DIAPETPFSIEGAGGAIRFEPFSQVHGDI-ESLGFRIGSVVYCTDVSAFPEQSLQYIKDADVLIIGALQYR-PHPSHFSL 243 (293)
T ss_dssp ECCTTCCEEECCTTCCEEEEEEEEEETTE-EEEEEEETTEEEECSCSBCCGGGHHHHTTCSEEEEECCCSS-CBTTBCCH
T ss_pred EcCCCCcEEECCCCCcEEEEEEEecCCCC-CEEEEEEeEEEEECCCCCCCHHHHHHhcCCCEEEEeCccCC-CCCCCCCH
Confidence 665 67899999 9999999999853 79999999999999998777889999999999999998754 56889999
Q ss_pred HHHHHHHHHhCC-eEEEEeccCCC
Q 020812 294 PRVDKFLAYSGN-QFTLSNMSLTI 316 (321)
Q Consensus 294 ~~a~~~~~~~~~-~~vltH~~~~~ 316 (321)
++++++++++++ +++++|++.+.
T Consensus 244 ~~a~~~~~~~~~k~lvl~H~~~~~ 267 (293)
T 3md7_A 244 GEALEWIEKLSPKRAILTHMHVPL 267 (293)
T ss_dssp HHHHHHHHHHCCSEEEEESBCTTC
T ss_pred HHHHHHHHHcCCCEEEEECCCCCC
Confidence 999999999997 99999998863
No 2
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A
Probab=100.00 E-value=2.4e-38 Score=291.58 Aligned_cols=229 Identities=21% Similarity=0.292 Sum_probs=184.3
Q ss_pred eEEEEEcccCCCCcccccccCCCCCCCcccccccCCCCC-CcccccEEEEEecCCCCCce-EEEecCCCchHHHHhhcc-
Q 020812 68 SEIVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGNK-NRRLNTSILIRYPGPSGRRN-ILIDAGKFFYHSALRWFP- 144 (321)
Q Consensus 68 ~~i~~LGtG~s~g~P~~~~~~~~~~~c~~c~~~~~~~~~-~~r~~ss~lI~~~~~~~~~~-iLID~G~~~~~~l~~~l~- 144 (321)
|||+|||||++.|+|+++| .|++|.++++.+++ +.|.++|++|+. +++. ||||||++...++.+.-.
T Consensus 3 M~~~~LGtg~s~G~P~~~C------~C~~C~~a~~~~~~~~~R~~ss~li~~----~~~~~iLiD~G~~~~~~l~~~~~l 72 (321)
T 3jxp_A 3 MYIQVLGSAAGGGFPQWNC------NCVNCKGYRDGTLKATARTQSSIALSD----DGVHWILCNASPDIRAQLQAFAPM 72 (321)
T ss_dssp EEEEEEECBCTTTBTTTTC------CSHHHHHHHHTCSCCCCBCBCEEEEES----SSSSEEEECCCTTHHHHHHTCGGG
T ss_pred EEEEEEEeCCCCCCCcCCc------CCccchhhhhCCCCCCcccceEEEEEe----CCceEEEEeCCchHHHHHHhcccc
Confidence 8999999999999999999 99999999877666 899999999994 5554 999999998777765310
Q ss_pred ----cCCCCCccEEEecCCchhhhcChHHHHHhhccccccccEEechhhHHHHHhhccccccccCCCCCCCccceeeEEe
Q 020812 145 ----AYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNII 220 (321)
Q Consensus 145 ----~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (321)
+.++.+|++|||||.|.||++|++.+.+ ..+++||+++.+.+.+...+. .+... ......+++..+
T Consensus 73 ~~~~~~~~~~i~~i~lTH~H~DH~~gl~~l~~-----~~~~~vy~~~~~~~~l~~~~~-~f~~~----~~~~~~i~~~~i 142 (321)
T 3jxp_A 73 QPARALRDTGINAIVLLDSQIDHTTGLLSLRE-----GCPHQVWCTDMVHQDLTTGFP-LFNML----SHWNGGLQWNRI 142 (321)
T ss_dssp CCCSSSSCCSEEEEECSCCCHHHHGGGGGGGG-----GCCEEEEECHHHHHHTTTTSC-HHHHH----TTTTTCEEEEEC
T ss_pred cccccCCcccCCEEEECCCChhhhhhHHHHHh-----cCCCeEEECHHHHHHHHhhCc-ccccc----ccccCceeEEEc
Confidence 1356899999999999999999998854 247899999999887765332 11110 001122456666
Q ss_pred C-CceEEE---CCEEEEEEEec--------cCCC---ceEEEEEEc------cEEEeCCCCCCCcchhhhcCCCCEEEEc
Q 020812 221 D-EEPFTV---QDLKITPLPVW--------HGAG---YRSLGFRFG------NICYISDVSEIPEETYPFLQDCEILIMD 279 (321)
Q Consensus 221 ~-~~~~~~---~~~~v~~~p~~--------H~~g---~~s~g~~i~------~i~ysGDt~~~~~~~~~~~~~~dlli~e 279 (321)
+ ++.+++ ++++|+++++. |..+ .+++||+|+ +++|+||+.+.++++++.++++|+|++|
T Consensus 143 ~~g~~~~i~~~~~~~V~~~~v~H~~~~~~~H~~~~~~~~~~Gy~i~~~~~g~~i~y~~Dt~~~~~~~~~~~~~~D~li~e 222 (321)
T 3jxp_A 143 ELEGSFVIDACPNLKFTPFPLRSAAPPYSPHRFDPHPGDNLGLMVEDTRTGGKLFYAPGLGQVDEKLLAMMHGADCLLVD 222 (321)
T ss_dssp CSSSCEECTTSTTEEEEEEEECCCCCTTCTTTTSCCTTSEEEEEEEETTTCCEEEEESSCCCCCHHHHHHHHHCSEEEEE
T ss_pred CCCCeEEeccCCCeEEEEEEecCCccccccccccccCCCcEEEEEEecCCCcEEEEECCCCCCCHHHHHHhcCCCEEEEe
Confidence 5 578999 99999999998 5531 279999997 7999999998888899999999999999
Q ss_pred ccCCCC-------------CCCCCCCHH---HHHHHHHHhCC-eEEEEeccCCC
Q 020812 280 ALRPDR-------------SSSTHFGLP---RVDKFLAYSGN-QFTLSNMSLTI 316 (321)
Q Consensus 280 a~~~~~-------------~~~~H~~~~---~a~~~~~~~~~-~~vltH~~~~~ 316 (321)
+++... ..++|++.+ +|+++++++++ +++|+|++.++
T Consensus 223 at~~~d~e~~~~glk~r~~~~~gH~s~~~~~eA~~~a~~~~~k~lvLtH~s~~n 276 (321)
T 3jxp_A 223 GTLWEDDEMQRRGVGTRTGREMGHLAQNGPGGTLEVLDGFPRQRKVLIHINNTN 276 (321)
T ss_dssp CCCSSTTHHHHHTSCSCCCC-CCCCCSSSTTCHHHHHTTCSSSEEEEESBCTTC
T ss_pred CCCCCcHHHhhccccccccCCCcccCCCCHHHHHHHHHhCCCCeEEEEEeCCCC
Confidence 987541 346899999 99999999997 99999999764
No 3
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=100.00 E-value=1.4e-35 Score=265.11 Aligned_cols=214 Identities=28% Similarity=0.514 Sum_probs=170.0
Q ss_pred ceEEEEEcccCCCCcccccccCCCCCCCcccccccCCCCCCcccccEEEEEecCCCCCceEEEecCCCchHHHHhhcccC
Q 020812 67 QSEIVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGNKNRRLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAY 146 (321)
Q Consensus 67 ~~~i~~LGtG~s~g~P~~~~~~~~~~~c~~c~~~~~~~~~~~r~~ss~lI~~~~~~~~~~iLID~G~~~~~~l~~~l~~~ 146 (321)
.|||+|||||++.|+|.++| .|++|.++++ .+.+.|+++|++|+. ++..+|||||.+... + ..
T Consensus 2 ~~~~~~LGtg~~~g~P~~~c------~C~~C~~ar~-~~~~~r~~s~~li~~----~~~~iLiD~G~~~~~---~---~~ 64 (258)
T 3g1p_A 2 SLTLTLTGTGGAQGVPAWGC------ECAACARARR-SPQYRRQPCSGVVKF----NDAITLIDAGLHDLA---D---RW 64 (258)
T ss_dssp CEEEEEEECBCSSCBSCTTC------CSHHHHHHHH-CGGGCBCBSEEEEEE----TTEEEEECCCCTTHH---H---HC
T ss_pred ceEEEEEEeCCCCCCccCCc------CChhhhhhhh-CccccccCceEEEEE----CCcEEEEECCchHHH---h---hc
Confidence 38999999999999999999 9999999865 346889999999994 789999999965322 2 23
Q ss_pred CCCCccEEEecCCchhhhcChHHHHHhhccccccccEEechhhHHHHHhhccccccccCCCCCCCccceee-EEeC-Cce
Q 020812 147 GIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQF-NIID-EEP 224 (321)
Q Consensus 147 ~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~ 224 (321)
...+|++||+||.|.||++|+..+... ...+++||+++.+.. +.. ++.. ++ . .++ ..++ ++.
T Consensus 65 ~~~~id~IliTH~H~DHi~gl~~l~~~---~~~~~~v~~~~~~~~-~~~----~~~~----~~--~--~~~~~~~~~g~~ 128 (258)
T 3g1p_A 65 SPGSFQQFLLTHYHMDHVQGLFPLRWG---VGDPIPVYGPPDEQG-CDD----LFKH----PG--L--LDFSHTVEPFVV 128 (258)
T ss_dssp CTTSSCEEECSCCCHHHHGGGTTTTTC---SSSCEEEEECCCSSC-STT----TTTS----CT--T--EEEEEECCTTCC
T ss_pred CcccCCEEEEccCchhHhCCHHHHhcc---CCCCeEEEeChhhhh-HHH----HhcC----CC--c--cccccccCCCCe
Confidence 446899999999999999999877432 123589999987651 000 1100 11 1 122 2343 678
Q ss_pred EEECCEEEEEEEeccCCCceEEEEEEc----cEEEeCCCCCCCcchhhhc--CCCCEEEEcccCCCCC--CCCCCCHHHH
Q 020812 225 FTVQDLKITPLPVWHGAGYRSLGFRFG----NICYISDVSEIPEETYPFL--QDCEILIMDALRPDRS--SSTHFGLPRV 296 (321)
Q Consensus 225 ~~~~~~~v~~~p~~H~~g~~s~g~~i~----~i~ysGDt~~~~~~~~~~~--~~~dlli~ea~~~~~~--~~~H~~~~~a 296 (321)
+++++++|+++++.|++ .++||+++ +++|+||+.+.++++.+.+ +++|+|++|+++.+.. ..+|++.+++
T Consensus 129 ~~~g~~~v~~~~~~H~~--~~~g~~i~~~~~~i~~~GDt~~~~~~~~~~l~~~~~Dlli~e~t~~~~~~~~~~H~~~~~a 206 (258)
T 3g1p_A 129 FDLQGLQVTPLPLNHSK--LTFGYLLETAHSRVAWLSDTAGLPEKTLKFLRNNQPQVMVMDCSHPPRADAPRNHCDLNTV 206 (258)
T ss_dssp EEETTEEEEEEECCSSS--CCEEEEEECSSCEEEEECSCSSCCHHHHHHHHHTCCSEEEEECCBSSCSSCCSSSCBHHHH
T ss_pred EEECCEEEEEEECCCCC--CceEEEEEeCCcEEEEECCCCCCCHHHHHHHHhCCCCEEEEeCCCCCccccCCCCCCHHHH
Confidence 99999999999999998 57999996 7999999999887777777 7999999999987643 5789999999
Q ss_pred HHHHHHhCC-eEEEEeccCC
Q 020812 297 DKFLAYSGN-QFTLSNMSLT 315 (321)
Q Consensus 297 ~~~~~~~~~-~~vltH~~~~ 315 (321)
.++++++++ +++++|++++
T Consensus 207 ~~~~~~~~~k~lil~H~s~~ 226 (258)
T 3g1p_A 207 LALNQVIRSPRVILTHISHQ 226 (258)
T ss_dssp HHHHHHHCCSCEEEESCCHH
T ss_pred HHHHHHcCCCEEEEECccCc
Confidence 999999997 9999999754
No 4
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=99.98 E-value=3.9e-31 Score=241.57 Aligned_cols=212 Identities=19% Similarity=0.261 Sum_probs=163.1
Q ss_pred eEEEEEcccCCCCcccccccCCCCCCCcccccccCCCCCCcccccEEEEEecCCCCCceEEEecCCCchHHHHhhcccCC
Q 020812 68 SEIVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGNKNRRLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYG 147 (321)
Q Consensus 68 ~~i~~LGtG~s~g~P~~~~~~~~~~~c~~c~~~~~~~~~~~r~~ss~lI~~~~~~~~~~iLID~G~~~~~~l~~~l~~~~ 147 (321)
|+|+|||||++ +|. ..|+++|++|+...+.++..+|||||.+...++.+. +..
T Consensus 2 m~i~~LGtg~~--~p~-----------------------~~r~~~~~li~~~~~~~~~~iliD~G~~~~~~l~~~--~~~ 54 (306)
T 2cbn_A 2 MNLIFLGTSAG--VPT-----------------------RTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHT--AFN 54 (306)
T ss_dssp CEEEEEECBSS--SCC-----------------------SSCCBCEEEEECCCSSCCCEEEECCCTTHHHHHHTS--CCC
T ss_pred eEEEEEEcCCC--CCC-----------------------CCCCCCEEEEEeecCCCCcEEEEECCHHHHHHHHHh--CCC
Confidence 89999999975 664 357889999993100067899999999976555542 345
Q ss_pred CCCccEEEecCCchhhhcChHHHHHhh--ccccccccEEechhhHHHHHhhccccccccCCCCCCCccceeeEEeC-Cce
Q 020812 148 IRTIDAVIITHSHADAIGGLDDLRDWT--NNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIID-EEP 224 (321)
Q Consensus 148 ~~~Id~V~iTH~H~DH~~Gl~~l~~~~--~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 224 (321)
+.+|++|||||.|.||++|++.+.... ....++++||+++.+.+.++......... ....+++..++ ++.
T Consensus 55 ~~~i~~i~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~-------~~~~~~~~~~~~g~~ 127 (306)
T 2cbn_A 55 PGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFVETALRISGSW-------TDYPLEIVEIGAGEI 127 (306)
T ss_dssp TTTEEEEECSCCCHHHHTTHHHHHHHHHHTTCCSCEEEEESTTHHHHHHHHHHHTTCC-------CSSCEEEEECCSEEE
T ss_pred HHHcCEEEEecCCchhhCChHHHHHHHHhcCCCCCeEEEcCccHHHHHHHHHHhhccC-------CCceEEEEEcCCCcE
Confidence 678999999999999999999887642 22235789999999888776543211100 00123445555 467
Q ss_pred EEECCEEEEEEEeccCCCceEEEEEEc-----------------------------------------------------
Q 020812 225 FTVQDLKITPLPVWHGAGYRSLGFRFG----------------------------------------------------- 251 (321)
Q Consensus 225 ~~~~~~~v~~~p~~H~~g~~s~g~~i~----------------------------------------------------- 251 (321)
+++++++|+++++.|+. +++||+++
T Consensus 128 ~~~~~~~v~~~~~~H~~--~~~gy~i~~~~~~~~~~~~~~~~~gv~~~~~~~~l~~g~~v~~~~G~~~~~~~~~~~~~~g 205 (306)
T 2cbn_A 128 LDDGLRKVTAYPLEHPL--ECYGYRIEEHDAPGALNAQALKAAGVPPGPLFQELKAGKTITLEDGRQINGADYLAAPVPG 205 (306)
T ss_dssp EECSSEEEEEEECBSSS--CCEEEEEEECCCCCCBCHHHHHHTTCCSSHHHHHHHHTCCCEETTTEECCGGGTBCCCCCC
T ss_pred eecCCEEEEEEEccCCC--CccEEEEEecCccCccCHHHHHHcCCCCchHHHHhcCCCeEEcCCCcEEcHHHhcCCCCCC
Confidence 88999999999999987 57888773
Q ss_pred -cEEEeCCCCCCCcchhhhcCCCCEEEEcccCCCC-----CCCCCCCHHHHHHHHHHhCC-eEEEEeccCCC
Q 020812 252 -NICYISDVSEIPEETYPFLQDCEILIMDALRPDR-----SSSTHFGLPRVDKFLAYSGN-QFTLSNMSLTI 316 (321)
Q Consensus 252 -~i~ysGDt~~~~~~~~~~~~~~dlli~ea~~~~~-----~~~~H~~~~~a~~~~~~~~~-~~vltH~~~~~ 316 (321)
+++|+||+.+++ .+.+.++++|+||+|+++.+. ...+|++.+++.++++++++ +++++|+++..
T Consensus 206 ~~i~~sgDt~~~~-~~~~~~~~~D~li~E~t~~~~~~~~a~~~~H~t~~~a~~~a~~~~~~~lvl~H~s~~~ 276 (306)
T 2cbn_A 206 KALAIFGDTGPCD-AALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSRY 276 (306)
T ss_dssp CEEEECCSCBSCS-THHHHHTTCSEEEEECCBCGGGHHHHHHTTCCBHHHHHHHHHHHTCSEEEEECBCTTC
T ss_pred CEEEEeCCCCCHH-HHHHHhcCCCEEEEECcCChhhHhHHhhcCCCCHHHHHHHHHHcCCcEEEEEeecCCC
Confidence 599999999875 578888999999999999764 25789999999999999997 99999999853
No 5
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=99.97 E-value=1.6e-30 Score=239.15 Aligned_cols=210 Identities=21% Similarity=0.318 Sum_probs=161.0
Q ss_pred eEEEEEcccCCCCcccccccCCCCCCCcccccccCCCCCCcccccEEEEEecCCCCCceEEEecCCCchHHHHhhcccCC
Q 020812 68 SEIVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGNKNRRLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYG 147 (321)
Q Consensus 68 ~~i~~LGtG~s~g~P~~~~~~~~~~~c~~c~~~~~~~~~~~r~~ss~lI~~~~~~~~~~iLID~G~~~~~~l~~~l~~~~ 147 (321)
|+|+|||||++ +|. ..|+.+|++|+... .++..+|||||.+...++.+. +.+
T Consensus 1 M~i~~LGtg~~--~p~-----------------------~~r~~~~~li~~~~-~~~~~iLiD~G~~~~~~l~~~--~~~ 52 (320)
T 1y44_A 1 MELLFLGTGAG--IPA-----------------------KARNVTSVALKLLE-ERRSVWLFDCGEATQHQMLHT--TIK 52 (320)
T ss_dssp CEEEEEECBSS--SCC-----------------------SSCCBCEEEEEETT-TTSEEEEECCCTTHHHHHTTS--SCC
T ss_pred CEEEEEecCCC--CCC-----------------------ccCCCCEEEEEEec-CCCcEEEEECCHHHHHHHHHc--CCC
Confidence 79999999975 664 35778999999300 167899999999875555431 345
Q ss_pred CCCccEEEecCCchhhhcChHHHHHhh--ccccccccEEechhhHHHHHhhccccccccCCCCCCCccceeeEEeC-Cce
Q 020812 148 IRTIDAVIITHSHADAIGGLDDLRDWT--NNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIID-EEP 224 (321)
Q Consensus 148 ~~~Id~V~iTH~H~DH~~Gl~~l~~~~--~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 224 (321)
+.+|++|||||.|+||++|++.+.... ....++++||+++.+.+.++......... . ....++..++ ++.
T Consensus 53 ~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~----~---~~~~~~~~~~~g~~ 125 (320)
T 1y44_A 53 PRKIEKIFITHMHGDHVYGLPGLLGSRSFQGGEDELTVYGPKGIKAFIETSLAVTKTH----L---TYPLAIQEIEEGIV 125 (320)
T ss_dssp GGGEEEEECSBCCGGGTTTHHHHHHHHHHTTCCSCEEEEESTTHHHHHHHHHHHTTCC----C---SSCEEEEECCSEEE
T ss_pred HHHcCEEEEeCCChhhhCCHHHHHHHHHhcCCCCCEEEEeCHHHHHHHHHHHHhhccC----C---CCceEEEEcCCCce
Confidence 678999999999999999999887642 22235789999999888776543211100 0 0112444554 467
Q ss_pred EEECCEEEEEEEeccCCCceEEEEEEc-----------------------------------------------------
Q 020812 225 FTVQDLKITPLPVWHGAGYRSLGFRFG----------------------------------------------------- 251 (321)
Q Consensus 225 ~~~~~~~v~~~p~~H~~g~~s~g~~i~----------------------------------------------------- 251 (321)
+++++++|+++|+.|+. .++||+++
T Consensus 126 ~~~~~~~v~~~p~~H~~--~~~gy~i~~~~~~~~~~~~~~~~~g~~~g~~~~~l~~g~~v~~~~G~i~~~~~~~~~~~~g 203 (320)
T 1y44_A 126 FEDDQFIVTAVSVIHGV--EAFGYRVQEKDVPGSLKADVLKEMNIPPGPVYQKIKKGETVTLEDGRIINGNDFLEPPKKG 203 (320)
T ss_dssp EECSSEEEEEEECBSSS--SBEEEEEEECCBCCCC--------------------------------------CCCCBCC
T ss_pred EecCCEEEEEEEccCCC--CcceEEEecCCCcCccCHHHHHHcCCCCchhHHHhhCCCeEEcCCCeEEcHHHhcccCCCC
Confidence 88899999999999998 56888763
Q ss_pred -cEEEeCCCCCCCcchhhhcCCCCEEEEcccCCCCC-----CCCCCCHHHHHHHHHHhCC-eEEEEeccCC
Q 020812 252 -NICYISDVSEIPEETYPFLQDCEILIMDALRPDRS-----SSTHFGLPRVDKFLAYSGN-QFTLSNMSLT 315 (321)
Q Consensus 252 -~i~ysGDt~~~~~~~~~~~~~~dlli~ea~~~~~~-----~~~H~~~~~a~~~~~~~~~-~~vltH~~~~ 315 (321)
+++|+||+.++ +.+.+.++++|+||+|+++.+.. ..+|++.+++.++++++++ +++++|+++.
T Consensus 204 ~~i~~sgDt~~~-~~~~~~~~~~D~li~E~t~~~~~~~~a~~~~H~t~~~a~~~a~~~~~~~lil~H~s~~ 273 (320)
T 1y44_A 204 RSVVFSGDTRVS-DKLKELARDCDVMVHEATFAKEDRKLAYDYYHSTTEQAAVTAKEARAKQLILTHISAR 273 (320)
T ss_dssp CEEEECCSCBCC-HHHHHHTTTCSEEEEECCBCTTCHHHHHHTTCCBHHHHHHHHHHHTCSEEEEECBCTT
T ss_pred CEEEEeCCCCCH-HHHHHHhCCCCEEEEeccCCcchHhHHhhcCCCCHHHHHHHHHHcCCCEEEEEeEcCC
Confidence 69999999987 46888889999999999998752 5789999999999999997 9999999984
No 6
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}
Probab=99.97 E-value=5.7e-30 Score=240.02 Aligned_cols=208 Identities=20% Similarity=0.259 Sum_probs=157.8
Q ss_pred eEEEEEcccCCCCcccccccCCCCCCCcccccccCCCCCCcccccEEEEEecCCCCCceEEEecCCCchHHHHhhcccCC
Q 020812 68 SEIVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGNKNRRLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYG 147 (321)
Q Consensus 68 ~~i~~LGtG~s~g~P~~~~~~~~~~~c~~c~~~~~~~~~~~r~~ss~lI~~~~~~~~~~iLID~G~~~~~~l~~~l~~~~ 147 (321)
|+|+|||||++ +|. ..|+.+|++|+. ++..+|||||.+...++.+. ...
T Consensus 1 M~l~~LGtg~~--~p~-----------------------~~r~~ss~ll~~----~~~~iLiD~G~g~~~~l~~~--~~~ 49 (368)
T 3zwf_A 1 MDVTFLGTGAA--YPS-----------------------PTRGASAVVLRC----EGECWLFDCGEGTQTQLMKS--QLK 49 (368)
T ss_dssp CEEEEEECBSS--SCC-----------------------SSSCSSEEEEEE----TTEEEEECCCTTHHHHHHHS--SSC
T ss_pred CEEEEECCCCC--CCC-----------------------CCCCccEEEEEE----CCeEEEEeCChhHHHHHHHc--CCC
Confidence 89999999875 554 357789999994 77899999999987666652 455
Q ss_pred CCCccEEEecCCchhhhcChHHHHHhhcc------ccccccEEechhhHHHHHhhccccccccCCCCCCCccceeeEEeC
Q 020812 148 IRTIDAVIITHSHADAIGGLDDLRDWTNN------VQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIID 221 (321)
Q Consensus 148 ~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~------~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (321)
+.+|++|||||.|.||++|++.++..... ..++++||+|+.+.+.+........... ...+.++.+.
T Consensus 50 ~~~id~I~iTH~H~DHi~gl~~l~~~~~~~~~~~~~~~~l~iygp~~~~~~l~~~l~~~~~~~-------~~~~~~~el~ 122 (368)
T 3zwf_A 50 AGRITKIFITHLHGDHFFGLPGLLCTISLQSGSMVSKQPIEIYGPVGLRDFIWRTMELSHTEL-------VFHYVVHELV 122 (368)
T ss_dssp GGGEEEEECCCSSGGGTTTHHHHHHHHHHHC------CCEEEEEETTHHHHHHHHHHHTTCCC-------SSCEEEEEEC
T ss_pred hHHCCEEEECCCChHHhCcHHHHHHHhhhccccccCCCCeEEEEcHHHHHHHHHHHHhhCcCC-------CceEEEEEee
Confidence 57899999999999999999998764211 1247899999999888776322110000 0000111110
Q ss_pred ----------------------------C------------ceEEECCEEEEEEEeccCCCceEEEEEEc----------
Q 020812 222 ----------------------------E------------EPFTVQDLKITPLPVWHGAGYRSLGFRFG---------- 251 (321)
Q Consensus 222 ----------------------------~------------~~~~~~~~~v~~~p~~H~~g~~s~g~~i~---------- 251 (321)
+ ..++.++++|+++|+.|+. +++||+|+
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~V~a~~~~H~v--p~~gy~i~e~~~~g~~~~ 200 (368)
T 3zwf_A 123 PTADQCPAEELKEFAHVNRADSPPKEEQGRTILLDSEENSYLLFDDEQFVVKAFRLFHRI--PSFGFSVVEKKRPGKLNA 200 (368)
T ss_dssp CCGGGSCC-------------------CCCEECCBTTTTBEEEEECSSEEEEEEEEESSS--CEEEEEEEECC-------
T ss_pred cCccccccccccccccccccccCcccccccccccccccCceeEEeCCCEEEEEEeccCCC--ceEEEEEEecCCcCccCH
Confidence 1 1345579999999999998 89999983
Q ss_pred --------------------------------------------cEEEeCCCCC--CCcchhhhcCCCCEEEEcccCCCC
Q 020812 252 --------------------------------------------NICYISDVSE--IPEETYPFLQDCEILIMDALRPDR 285 (321)
Q Consensus 252 --------------------------------------------~i~ysGDt~~--~~~~~~~~~~~~dlli~ea~~~~~ 285 (321)
+++|+|||.+ + +++.+.++++|+||+|+++.+.
T Consensus 201 ek~~~~gip~G~~~~~Lk~G~~v~~~dG~~i~~~~v~~~~~~g~~v~~~GDT~~~~~-~~~~~~~~~~Dlli~Eat~~~~ 279 (368)
T 3zwf_A 201 QKLKDLGVPPGPAYGKLKNGISVVLENGVTISPQDVLKKPIVGRKICILGDCSGVVG-DGGVKLCFEADLLIHEATLDDA 279 (368)
T ss_dssp -----------------------------------------CCCEEEEECSCSEECS-SHHHHHTTTCSEEEEECCSCGG
T ss_pred HHHHHcCCCchHHHHhcCCCCeEEecCCEEEEhHHhccccccceEEEEEecCCcccc-hhHHHHhcCCCEEEEecCCChH
Confidence 4899999987 4 4578889999999999999864
Q ss_pred C-----CCCCCCHHHHHHHHHHhCC-eEEEEeccCCC
Q 020812 286 S-----SSTHFGLPRVDKFLAYSGN-QFTLSNMSLTI 316 (321)
Q Consensus 286 ~-----~~~H~~~~~a~~~~~~~~~-~~vltH~~~~~ 316 (321)
. ..+|+++++|.++++++++ +++++|++..-
T Consensus 280 ~~~~a~~~~H~t~~~A~~~a~~~~~k~lil~H~s~ry 316 (368)
T 3zwf_A 280 QMDKAKEHGHSTPQMAATFAKLCRAKRLVLTHFSQRY 316 (368)
T ss_dssp GHHHHHHTTCCCHHHHHHHHHHTTCSEEEEECBCCCC
T ss_pred HHhhhhcCCCCCHHHHHHHHHHcCCCEEEEEeeCccc
Confidence 2 3789999999999999997 99999998653
No 7
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=99.97 E-value=7.5e-29 Score=222.39 Aligned_cols=205 Identities=18% Similarity=0.238 Sum_probs=161.1
Q ss_pred CCCceEEEEEcccCCCCcccccccCCCCCCCcccccccCCCCCCcccccEEEEEecCCCCCceEEEecCCCchHHHHhhc
Q 020812 64 PAQQSEIVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGNKNRRLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWF 143 (321)
Q Consensus 64 ~~~~~~i~~LGtG~s~g~P~~~~~~~~~~~c~~c~~~~~~~~~~~r~~ss~lI~~~~~~~~~~iLID~G~~~~~~l~~~l 143 (321)
+...|+|++||||++ +|.. .|+.+|++|+. ++..+|||||.+...++.+.
T Consensus 21 ~~~~m~i~~LG~g~~--~p~~-----------------------~~~~~~~li~~----~~~~iLiD~G~~~~~~l~~~- 70 (268)
T 1zkp_A 21 QSNAMKMTVVGFWGG--FPEA-----------------------GEATSGYLFEH----DGFRLLVDCGSGVLAQLQKY- 70 (268)
T ss_dssp CSSCEEEEEEECBSS--SCCT-----------------------TCCBSEEEEEE----TTEEEEECCCTTHHHHHTTT-
T ss_pred CCCCcEEEEEeCCCC--cCCC-----------------------CCCccEEEEEE----CCcEEEEECCHHHHHHHHHh-
Confidence 345699999999874 6642 35678999994 77899999999876666553
Q ss_pred ccCCCCCccEEEecCCchhhhcChHHHHHhhc------cccccccEEechhhHHHHHhhccccccccCCCCCCCccceee
Q 020812 144 PAYGIRTIDAVIITHSHADAIGGLDDLRDWTN------NVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQF 217 (321)
Q Consensus 144 ~~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~------~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 217 (321)
.++.+|++||+||.|.||++|++.+.+... ...++++||+++.+.+.+.... + +. ..+.
T Consensus 71 --~~~~~i~~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~--~-------~~----~~~~ 135 (268)
T 1zkp_A 71 --ITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQLPELPIYGHTFDENGFHSLT--H-------EP----HTKG 135 (268)
T ss_dssp --CCGGGCCEEECSCCCHHHHTTHHHHHHHHHHHHHHHCCCCCEEEEECSSSHHHHHTTC--B-------TT----TEEE
T ss_pred --CCcccCCEEEEecCCchhhCCHHHHHHHHHhcccccCCCCceEEEeCccHHHHHHhcc--c-------CC----ccce
Confidence 456789999999999999999998876411 1245689999999888776531 0 00 1133
Q ss_pred EEeC-CceEEECCEEEEEEEeccCCCceEEEEEEc----cEEEeCCCCCCCcchhhhcCCCCEEEEcccCCCCC---CCC
Q 020812 218 NIID-EEPFTVQDLKITPLPVWHGAGYRSLGFRFG----NICYISDVSEIPEETYPFLQDCEILIMDALRPDRS---SST 289 (321)
Q Consensus 218 ~~~~-~~~~~~~~~~v~~~p~~H~~g~~s~g~~i~----~i~ysGDt~~~~~~~~~~~~~~dlli~ea~~~~~~---~~~ 289 (321)
..++ ++.+++++++|+++++.|++ .+++|+++ +++|+||+.+. +++.+.++++|++++|+++.+.. ..+
T Consensus 136 ~~~~~g~~~~~g~~~v~~~~~~H~~--~~~~~~i~~~~~~i~~~GD~~~~-~~~~~~~~~~d~li~e~~~~~~~~~~~~~ 212 (268)
T 1zkp_A 136 IPYNPEETLQIGPFSISFLKTVHPV--TCFAMRITAGNDIVVYSADSSYI-PEFIPFTKDADLFICECNMYAHQEAAKAG 212 (268)
T ss_dssp EECCTTSCEEETTEEEEEEECCSSS--CCEEEEEEETTEEEEECCSCCCC-TTHHHHHTTCSEEEEECCBCTTSCCGGGT
T ss_pred EEecCCCeEEECCEEEEEEECCCCC--CceEEEEEECCeEEEEeCCCCCC-HHHHHHHcCCCEEEEECCCCccccccCCC
Confidence 4444 57889999999999999998 47999885 89999999986 45778889999999999986532 356
Q ss_pred CCCHHHHHHHHHHhCC-eEEEEeccCCC
Q 020812 290 HFGLPRVDKFLAYSGN-QFTLSNMSLTI 316 (321)
Q Consensus 290 H~~~~~a~~~~~~~~~-~~vltH~~~~~ 316 (321)
|++.+++.++++++++ +++++|++...
T Consensus 213 H~~~~~a~~~~~~~~~~~lil~H~~~~~ 240 (268)
T 1zkp_A 213 HMNSTEVASIAKDANVKELLLTHLPHTG 240 (268)
T ss_dssp CCBHHHHHHHHHHTTCSEEEEESBCSSS
T ss_pred CCCHHHHHHHHHHcCCCEEEEECCCCCC
Confidence 9999999999999997 99999998753
No 8
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=99.93 E-value=7e-25 Score=197.20 Aligned_cols=185 Identities=17% Similarity=0.216 Sum_probs=133.9
Q ss_pred cEEEEEecCCCCCceEEEecCCCchHHHHhhcccCCCCCccEEEecCCchhhhcChHHHHHh----hccccccccEEech
Q 020812 112 TSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDW----TNNVQRHIPIYVAM 187 (321)
Q Consensus 112 ss~lI~~~~~~~~~~iLID~G~~~~~~l~~~l~~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~----~~~~~~~~~v~~~~ 187 (321)
++++|. +..+|||||.+...++. ..+.+|++|||||.|.||++|++.+... ...+.++++||+++
T Consensus 13 ~~~~i~------~~~iLiD~G~~~~~~l~-----~~~~~i~~IliTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~v~~~~ 81 (280)
T 2e7y_A 13 TWIYYS------PERILFDAGEGVSTTLG-----SKVYAFKYVFLTHGHVDHIAGLWGVVNIRNNGMGDREKPLDVFYPE 81 (280)
T ss_dssp EEEEEG------GGTEEEEECTTHHHHHG-----GGGGGCCEEECSCCCHHHHTTHHHHHHHHHHHSGGGCCCEEEEEET
T ss_pred EEEEEC------CcEEEEECCcchHHHhc-----cCccCCCEEEEeCCchhHHCCHHHHHHHHHHhccCCCCCCEEEECc
Confidence 466664 36799999998754432 2356899999999999999999988532 21123468999999
Q ss_pred hhHHHHHhhccccccccCCCCCCCccceeeEEeC-CceEEEC-----CEEEEEEEeccCCCceEEEEEEc----------
Q 020812 188 RDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQ-----DLKITPLPVWHGAGYRSLGFRFG---------- 251 (321)
Q Consensus 188 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~v~~~p~~H~~g~~s~g~~i~---------- 251 (321)
.+. .+........... .. .....++..++ ++.++++ +++|+++++.|+++..++||+++
T Consensus 82 ~~~-~l~~~~~~~~~~~---~~-~~~~~~~~~~~~g~~~~~g~~~~~~~~v~~~~~~H~~~~~~~g~~i~~~~~~l~~~~ 156 (280)
T 2e7y_A 82 GNR-AVEEYTEFIKRAN---PD-LRFSFNVHPLKEGERVFLRNAGGFKRYVQPFRTKHVSSEVSFGYHIFEVRRKLKKEF 156 (280)
T ss_dssp TCH-HHHHHHHHHHHHC---GG-GTTTEEEEEECTTCCEECCCSSCSCEEEEEEECCSCSSSCCEEEEEEEEEEEECGGG
T ss_pred cHH-HHHHHHHHHhhcc---cC-CCCceEEEEcCCCCEEEeCCcccCCEEEEEEEccCCCCCceEEEEEEEcccccCHhh
Confidence 887 6654322110000 00 00112445555 5788998 89999999999984227999873
Q ss_pred ---------------------------cEEEeCCCCCCCcchhhhcCCCCEEEEcccCCCCC---CCCCCCHHHHHHHHH
Q 020812 252 ---------------------------NICYISDVSEIPEETYPFLQDCEILIMDALRPDRS---SSTHFGLPRVDKFLA 301 (321)
Q Consensus 252 ---------------------------~i~ysGDt~~~~~~~~~~~~~~dlli~ea~~~~~~---~~~H~~~~~a~~~~~ 301 (321)
+++|+|||.++ +.+.++++|+|++|+++.+.. ..+|++++++.++++
T Consensus 157 ~g~~~~~~~~l~~~~g~~~~~~~~~g~~i~ysgDt~~~---~~~~~~~~d~li~e~t~~~~~~~~~~~H~t~~~a~~~~~ 233 (280)
T 2e7y_A 157 QGLDSKEISRLVKEKGRDFVTEEYHKKVLTISGDSLAL---DPEEIRGTELLIHECTFLDARDRRYKNHAAIDEVMESVK 233 (280)
T ss_dssp TTCCHHHHHHHHHHHCTGGGEEEEEEEEEEECCSCSSC---CHHHHTTCSCEEEECCBC--------CCCBHHHHHHHHH
T ss_pred cCCCHHHHHHHHhhcCCceecCCccCCEEEEECCCChH---HHHhhcCCCEEEEeCCcCChhhHHhcCCCCHHHHHHHHH
Confidence 69999999986 566788999999999987542 468999999999999
Q ss_pred HhCC-eEEEEeccCC
Q 020812 302 YSGN-QFTLSNMSLT 315 (321)
Q Consensus 302 ~~~~-~~vltH~~~~ 315 (321)
++++ +++++|++..
T Consensus 234 ~~~~~~lvl~H~~~~ 248 (280)
T 2e7y_A 234 AAGVKKVILYHISTR 248 (280)
T ss_dssp HHTCCEEEEESCCGG
T ss_pred HcCCCEEEEEeecCc
Confidence 9997 9999999874
No 9
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=99.90 E-value=1.1e-22 Score=194.43 Aligned_cols=207 Identities=14% Similarity=0.111 Sum_probs=141.3
Q ss_pred CceEEEEEcccCCCCcccccccCCCCCCCcccccccCCCCCCcccccEEEEEecCCCCCceEEEecCCCchH--------
Q 020812 66 QQSEIVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGNKNRRLNTSILIRYPGPSGRRNILIDAGKFFYH-------- 137 (321)
Q Consensus 66 ~~~~i~~LGtG~s~g~P~~~~~~~~~~~c~~c~~~~~~~~~~~r~~ss~lI~~~~~~~~~~iLID~G~~~~~-------- 137 (321)
+.|+|+|||+++.. +.+|++|+. ++..+|||||.+...
T Consensus 5 ~~m~i~~lG~~~~~------------------------------g~n~~li~~----~~~~iLiD~G~~~~~~~~~~~~~ 50 (429)
T 2az4_A 5 AKTTVTFHSGILTI------------------------------GGTVIEVAY----KDAHIFFDFGTEFRPELDLPDDH 50 (429)
T ss_dssp CCEEEEEEECTTSS------------------------------SCCEEEEEE----TTEEEEECCCCCCCTTCCCSCCC
T ss_pred CceEEEEeeCCCcc------------------------------CCeEEEEEE----CCeEEEEecCCCCCcccCCCcch
Confidence 35999999987542 135899994 788999999987521
Q ss_pred --HHHh--hcc-----------------cCCCCCccEEEecCCchhhhcChHHHHHhhccccccccEEechhhHHHHHhh
Q 020812 138 --SALR--WFP-----------------AYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKT 196 (321)
Q Consensus 138 --~l~~--~l~-----------------~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~ 196 (321)
++.. .+. ..+..+|++|||||.|.||++|++.+.+ +++||+++.+.+.+...
T Consensus 51 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~i~~v~lTH~H~DHiggl~~l~~-------~~~iy~~~~~~~~~~~~ 123 (429)
T 2az4_A 51 IETLINNRLVPELKDLYDPRLGYEYHGAEDKDYQHTAVFLSHAHLDHSRMINYLDP-------AVPLYTLKETKMILNSL 123 (429)
T ss_dssp HHHHHHTTSSCCCSSCBCGGGCCCCCSSCCCCCSEEEEECSCSCHHHHTTGGGBCT-------TSCEEEEHHHHHHHHHH
T ss_pred hhhccCCcccCCchhhhcccccccchhhhhccccCCEEEECCchHHHhCcHhHhcC-------CCCEEECHHHHHHHHHH
Confidence 1111 111 2456789999999999999999988752 68999999998877653
Q ss_pred ccccccccCCCCCCCccceeeEEeC-CceEEECCEEEEEEEecc-CCCceEEEEEEc----cEEEeCCCCCCCc------
Q 020812 197 HYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPVWH-GAGYRSLGFRFG----NICYISDVSEIPE------ 264 (321)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~p~~H-~~g~~s~g~~i~----~i~ysGDt~~~~~------ 264 (321)
...................++..++ ++.+++++++|+++++.| .+ .+++|+++ +++|+||+.....
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~v~~~~~~H~~~--gs~~~~i~~~~~~i~~tGD~~~~~~~~~~~~ 201 (429)
T 2az4_A 124 NRKGDFLIPSPFEEKNFTREMIGLNKNDVIKVGEISVEIVPVDHDAY--GASALLIRTPDHFITYTGDLRLHGHNREETL 201 (429)
T ss_dssp TTTSCSSCCCTTSCTTCCCCCEEECTTCEEEETTEEEEEEECCCSST--TCEEEEEEETTEEEEECCSCCSSSTTHHHHH
T ss_pred HHhCccccccccccccccceEEEeCCCCeEEECCEEEEEEECCCCCh--hhEEEEEEeCCcEEEECCCcccCCCchHHHH
Confidence 2211000000000001122455555 678999999999999999 56 46888885 8999999975322
Q ss_pred chhhhcCCCCEEEEcccCCCCC-------CCCCCCHHHHHHHHHH----hCCeEEEEeccCC
Q 020812 265 ETYPFLQDCEILIMDALRPDRS-------SSTHFGLPRVDKFLAY----SGNQFTLSNMSLT 315 (321)
Q Consensus 265 ~~~~~~~~~dlli~ea~~~~~~-------~~~H~~~~~a~~~~~~----~~~~~vltH~~~~ 315 (321)
.+.+..+++|+|++|+++.+.. ..+|.+.+++.+.+.+ ...+++++|++..
T Consensus 202 ~~~~~~~~~d~Li~Est~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~rlil~h~~~~ 263 (429)
T 2az4_A 202 AFCEKAKHTELLMMEGVSISFPEREPDPAQIAVVSEEDLVQHLVRLELENPNRQITFNGYPA 263 (429)
T ss_dssp HHHHHHTTCSEEEEECCGGGSCCCCCCTTBCCCCSHHHHHHHHHHHHHTCSSSCEEEEECTT
T ss_pred HHHHhccCCCEEEECCCCcCcccccccccCCCCCCHHHHHHHHHHHHHhCCCcEEEEEeccc
Confidence 3566678999999999986521 2448888877554443 3337999998754
No 10
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=99.88 E-value=1.5e-21 Score=171.91 Aligned_cols=159 Identities=16% Similarity=0.255 Sum_probs=125.0
Q ss_pred EEEEEecCCCCCceEEEecCCCchHHHHhhcccCCCCCccEEEecCCchhhhcChHHHHHhhccccccccEEechhhHHH
Q 020812 113 SILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEV 192 (321)
Q Consensus 113 s~lI~~~~~~~~~~iLID~G~~~~~~l~~~l~~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~~~~~ 192 (321)
|++|+. ++..+|||||.+... -..+.+||+|++||.|.||+ |+..+.... .++++||+++.+.+.
T Consensus 39 ~~li~~----~~~~iliDpg~~~~~-------~~~~~~id~VliTH~H~DH~-~~~~l~~~~---~~~~~v~~~~~~~~~ 103 (235)
T 3kl7_A 39 SLMLTY----DNHSIQVDPVSEYAD-------YTTFPKADIILITHEHGDHL-DPKAIQAVE---KSDTEIIANENSQKK 103 (235)
T ss_dssp EEEEEE----TTEEEEESCCTTTCC-------TTSSCCCSEEEECCSSTTTC-CHHHHHHHC---CTTCEEEECHHHHHH
T ss_pred EEEEEE----CCEEEEECCCCCccc-------hhhCCCCCEEEECCCccccC-CHHHHHHhh---cCCCEEEEcHHHHHH
Confidence 889994 778999999986421 12346899999999999999 677666532 357899999888776
Q ss_pred HHhhccccccccCCCCCCCccceeeEEeC-Cc-eEEECCEEEEEEEeccCCC--------ceEEEEEEc----cEEEeCC
Q 020812 193 MKKTHYYLVDTSGIIPGAAVSELQFNIID-EE-PFTVQDLKITPLPVWHGAG--------YRSLGFRFG----NICYISD 258 (321)
Q Consensus 193 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~v~~~p~~H~~g--------~~s~g~~i~----~i~ysGD 258 (321)
+.+ ...++ ++ .+++++++|+++|+.|+++ ..+.||+++ +++|+||
T Consensus 104 l~~---------------------~~~l~~g~~~~~~g~~~i~~~p~~H~~~~~~~~~~~~~~~g~~i~~~g~~i~~~GD 162 (235)
T 3kl7_A 104 LGK---------------------GKVLKNGDTDTSISYMKIEAVPAYNTTPGRDKYHPRHRDNGYILTFDGLRVYIAGD 162 (235)
T ss_dssp HTC---------------------SEECCTTCEECCSTTCEEEEEECCCCSTTGGGTSCTTTSEEEEEEETTEEEEECCS
T ss_pred hcC---------------------cEEecCCCEEEEECCEEEEEEEeecCCCccccccCCCCceEEEEEeCCeEEEEECC
Confidence 521 11222 46 7888999999999999762 125799996 8999999
Q ss_pred CCCCCcchhhhcCCCCEEEEcccCCCCCCCCCCCHHHHHHHHHHhCC-eEEEEeccC
Q 020812 259 VSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRVDKFLAYSGN-QFTLSNMSL 314 (321)
Q Consensus 259 t~~~~~~~~~~~~~~dlli~ea~~~~~~~~~H~~~~~a~~~~~~~~~-~~vltH~~~ 314 (321)
|.+.++ + +.++++|++++++.. ..|++.++++++++++++ +++++|++.
T Consensus 163 t~~~~~-~-~~l~~~Dv~il~~~~-----~~h~~~~ea~~~~~~l~~k~vip~H~~~ 212 (235)
T 3kl7_A 163 TEDIPE-M-KDLKDIDIAFLPVNQ-----PYTMTVSQAAKAARMFSPKILYPYHYGD 212 (235)
T ss_dssp CCSCGG-G-GGCCSCSEEEEECCT-----TTSCCHHHHHHHHHHHCCSEEEEESCTT
T ss_pred CCchhh-H-HhhcCCCEEEECCCC-----CcccCHHHHHHHHHHcCCCEEEEEcCCC
Confidence 998754 4 346789999999864 579999999999999998 899999976
No 11
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=99.87 E-value=1.8e-21 Score=185.95 Aligned_cols=193 Identities=17% Similarity=0.225 Sum_probs=127.4
Q ss_pred ccEEEEEecCCCCCceEEEecCCCchHHHHhhccc--CCCCCccEEEecCCchhhhcChHHHHHhhccccccccEEechh
Q 020812 111 NTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPA--YGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMR 188 (321)
Q Consensus 111 ~ss~lI~~~~~~~~~~iLID~G~~~~~~l~~~l~~--~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~ 188 (321)
.+|++|+. ++..+|||||........+.+.. ..+.+||+|||||.|.||++|++.+.+. ..+.+||+++.
T Consensus 14 ~s~~li~~----~~~~iLID~G~~~~~~~~~~~~~~~~~~~~Id~VllTH~H~DH~gglp~l~~~----~~~~~Iy~t~~ 85 (431)
T 3iek_A 14 GSAHLLLA----GGRRVLLDCGMFQGKEEARNHAPFGFDPKEVDAVLLTHAHLDHVGRLPKLFRE----GYRGPVYATRA 85 (431)
T ss_dssp CCCEEEEE----TTEEEEECCCCCCGGGGGGGGSCCSSCGGGCCEEECSCCCHHHHTTHHHHHHT----TCCSCEEECHH
T ss_pred CcEEEEEE----CCeEEEEeCCCCcchhhccchhhcCCCcccCCEEEECCCChHHhccHHHHHHc----CCCCeEEEcHH
Confidence 36899994 78999999998432222222333 3457899999999999999999998764 23689999999
Q ss_pred hHHHHHhhcccccccc--CCCCCCCcc-c-eeeEEeC-CceEEECCEEEEEEEeccCCCceEEEEEEc----cEEEeCCC
Q 020812 189 DFEVMKKTHYYLVDTS--GIIPGAAVS-E-LQFNIID-EEPFTVQDLKITPLPVWHGAGYRSLGFRFG----NICYISDV 259 (321)
Q Consensus 189 ~~~~l~~~~~~~~~~~--~~~~~~~~~-~-~~~~~~~-~~~~~~~~~~v~~~p~~H~~g~~s~g~~i~----~i~ysGDt 259 (321)
+.+.+........... ..+...... . ..+..++ ++.+++++++++++++.|++| +.+|.++ +++|+||+
T Consensus 86 t~~l~~~~l~d~~~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~l~g~~v~~~~agH~~G--s~~~~i~~~~~~ilfsGD~ 163 (431)
T 3iek_A 86 TVLLMEIVLEDALKVMDEPFFGPEDVEEALGHLRPLEYGEWLRLGALSLAFGQAGHLPG--SAFVVAQGEGRTLVYSGDL 163 (431)
T ss_dssp HHHHHHHHHHHHHHHCSSCSSCHHHHHHHHHTEEECCTTCCEEETTEEEEEEECCSSTT--CEEEEEEETTEEEEECCCC
T ss_pred HHHHHHHHHHHHHhhcccCCCCHHHHHHHHhccEEcCCCCeEEeCCEEEEEEeCCCCcC--ceEEEEEECCEEEEEeCCC
Confidence 9877654322110000 000000000 0 1345555 578888999999999999996 5777774 79999999
Q ss_pred CCCCcchh---hhcCCCCEEEEcccCCCCCCCCC-CCHHHHHHHHHH---hCCeEEEEecc
Q 020812 260 SEIPEETY---PFLQDCEILIMDALRPDRSSSTH-FGLPRVDKFLAY---SGNQFTLSNMS 313 (321)
Q Consensus 260 ~~~~~~~~---~~~~~~dlli~ea~~~~~~~~~H-~~~~~a~~~~~~---~~~~~vltH~~ 313 (321)
...++.+. ....++|+||+|+|+.+..++.. ...++..+.+++ .+.++++..|+
T Consensus 164 ~~~~~~~l~~~~~~~~~D~LI~EsTy~~~~h~~~~~~~~~l~~~i~~~~~~gg~vlIp~fa 224 (431)
T 3iek_A 164 GNREKDVLPDPSLPPLADLVLAEGTYGDRPHRPYRETVREFLEILEKTLSQGGKVLIPTFA 224 (431)
T ss_dssp CCTTSSSSCCCCBCCCCSEEEEECTTTTCCCCCHHHHHHHHHHHHHHHHHTTCEEEEECCT
T ss_pred CCCCCcccCCccccCCccEEEEEcccCCcCCCChHHHHHHHHHHHHHHHHcCCeEEEEecc
Confidence 87655443 45678999999999987543221 112333444443 23477777665
No 12
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=99.86 E-value=2.5e-20 Score=174.04 Aligned_cols=183 Identities=16% Similarity=0.204 Sum_probs=124.8
Q ss_pred EEEEEecCCCCCceEEEe--cCCCch----------HHHHhh----------------cccCCCCCccEEEecCCchhhh
Q 020812 113 SILIRYPGPSGRRNILID--AGKFFY----------HSALRW----------------FPAYGIRTIDAVIITHSHADAI 164 (321)
Q Consensus 113 s~lI~~~~~~~~~~iLID--~G~~~~----------~~l~~~----------------l~~~~~~~Id~V~iTH~H~DH~ 164 (321)
|++|+. .++.+|||| +|.+.. .|+.+. +...++.+||+|||||.|.||+
T Consensus 47 ~~lI~~---~~g~~iLiDP~~G~g~~~~~~~~~~~~~ql~~~~G~~~l~~~~~~~p~~l~~~~l~~id~VliTH~H~DHi 123 (360)
T 2wyl_A 47 GIWLKS---EGGTNVCVDFWCGTGKQSHGNPLMKQGHQMQRMAGVKKLQPNLRTTPFVLDPFAIRQIDAVLATHDHNDHI 123 (360)
T ss_dssp EEEEEC---TTCCEEEESCCCCCCCCCCCC----------------CCCCCCBCSCCCCCGGGCCCCSEEECSBSCTTTC
T ss_pred EEEEEe---CCCCEEEEeecCCCCcccccccccccchhhhhhcCccccCCCcccCCCccCHHHcCCCCEEEECCCchhcC
Confidence 789994 247899999 777642 122111 1111246799999999999999
Q ss_pred cChHHHHHhhccccccccEEechhhHHHHHhhccccccccCCCCCCCccceeeEEeC-CceEEECCEEEEEEEeccCC--
Q 020812 165 GGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPVWHGA-- 241 (321)
Q Consensus 165 ~Gl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~p~~H~~-- 241 (321)
+ +..+........+.++||++....+.+.+. . .+..++..++ ++.+++++++|+++++.|..
T Consensus 124 g-~~~l~~l~~~~~~~~~v~~p~~~~~~l~~~-g-------------~~~~~~~~l~~g~~~~~g~~~v~~~~~~H~~~~ 188 (360)
T 2wyl_A 124 D-VNVAAAVMQNCADDVPFIGPKTCVDLWIGW-G-------------VPKERCIVVKPGDVVKVKDIEIHALDAFDRTAL 188 (360)
T ss_dssp C-HHHHHHHHHHSCTTCCEEECHHHHHHHHHH-T-------------CCGGGEEECCTTCEEEETTEEEEEEECCCC---
T ss_pred C-HHHHHHHHhcCCCCCEEEEcHHHHHHHHHc-C-------------CChheEEEcCCCCEEEECCEEEEEEeccCcccc
Confidence 4 433332211111368999999888777642 0 0112344554 57889999999999998852
Q ss_pred ----------C-------ceEEEEEEc----cEEEeCCCCCCCcchhhhc--CCCCEEEEcccCCCCCCCCCCCHHHHHH
Q 020812 242 ----------G-------YRSLGFRFG----NICYISDVSEIPEETYPFL--QDCEILIMDALRPDRSSSTHFGLPRVDK 298 (321)
Q Consensus 242 ----------g-------~~s~g~~i~----~i~ysGDt~~~~~~~~~~~--~~~dlli~ea~~~~~~~~~H~~~~~a~~ 298 (321)
| ..++||+++ +++|+||+.+.++ +.... .++|+++++..........|++.+++++
T Consensus 189 ~~~~~~~h~~g~~~~~~~~~~~g~~i~~~g~~i~~sGDt~~~~~-~~~i~~~~~~Dv~il~~g~~~~~~~~h~~~~ea~~ 267 (360)
T 2wyl_A 189 ITLPADQKAAGVLPDGMDDRAVNYLFKTPGGSLYHSGDSHYSNY-YAKHGNEHQIDVALGSYGENPRGITDKMTSADMLR 267 (360)
T ss_dssp ---------------CCTTTBEEEEEEETTEEEEECTTCCCCTT-HHHHHHHSCCCEEEEEBCCCCTTCCCSBCHHHHHH
T ss_pred cccccccccccccccccCcccEEEEEEECCcEEEEeCCCCcCHH-HHHHhhCCCCCEEEecCCCCcccccCCCCHHHHHH
Confidence 2 247899995 8999999998754 43332 2789999977542222357999999999
Q ss_pred HHHHhCC-eEEEEeccC
Q 020812 299 FLAYSGN-QFTLSNMSL 314 (321)
Q Consensus 299 ~~~~~~~-~~vltH~~~ 314 (321)
+++++++ +++++|++.
T Consensus 268 ~~~~l~~k~vi~~H~~~ 284 (360)
T 2wyl_A 268 MGEALNAKVVIPFHHDI 284 (360)
T ss_dssp HHHHHTCSEEEEESTTT
T ss_pred HHHHhCCCEEEEEeecc
Confidence 9999998 899999865
No 13
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=99.86 E-value=3.5e-20 Score=174.25 Aligned_cols=183 Identities=16% Similarity=0.179 Sum_probs=126.7
Q ss_pred EEEEEecCCCCCceEEEe--cCCCch----------HHHHhh----------------cccCCCCCccEEEecCCchhhh
Q 020812 113 SILIRYPGPSGRRNILID--AGKFFY----------HSALRW----------------FPAYGIRTIDAVIITHSHADAI 164 (321)
Q Consensus 113 s~lI~~~~~~~~~~iLID--~G~~~~----------~~l~~~----------------l~~~~~~~Id~V~iTH~H~DH~ 164 (321)
|++|+. .++.+|||| +|.+.. .|+.+. +...++.+||+|||||.|.||+
T Consensus 71 ~~lI~~---~~g~~iLiDP~~G~g~~~~~~~~~~~~~q~~~~~G~~~l~p~~~~~p~~l~~~~~~~iD~IliTH~H~DHi 147 (379)
T 3bv6_A 71 GIWLKS---AGNTNLSIDFWCGTGKKTQKNRLMNTQHQMMRMGGVEALQPNLRTSIFPLDPFAIKEIDAVLASHDHADHI 147 (379)
T ss_dssp EEEEEE---TTCCEEEESCCCCCCCCCSSCCBCCTTCHHHHHHCCCBCCCCCBCSCCCSCGGGCCCCSEEECSBCSGGGC
T ss_pred EEEEEe---CCCCEEEEccCCCCCccccccccccccchhheecCccccCccccCCCCccChHHCCCCCEEEECCCCcccC
Confidence 789995 237899999 776542 112111 1112356799999999999999
Q ss_pred cChHHHHHhhccccccccEEechhhHHHHHhhccccccccCCCCCCCccceeeEEeC-CceEEECCEEEEEEEeccC---
Q 020812 165 GGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPVWHG--- 240 (321)
Q Consensus 165 ~Gl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~p~~H~--- 240 (321)
|+..+........++++||++....+.+.+. . .+..++..++ ++.+++++++|+++++.|.
T Consensus 148 -g~~~l~~l~~~~~~~~~v~~~~~~~~~l~~~-g-------------~~~~~~~~l~~g~~~~~g~~~v~~~~~~H~~~~ 212 (379)
T 3bv6_A 148 -DVNVAAAVLQNCGEHVKFIGPQACVDLWLGW-G-------------VPQERCIVAKVGDVLEIGDVKIRVLDSFDRTAL 212 (379)
T ss_dssp -CHHHHHHHHHHSCTTCEEEECHHHHHHHHHH-T-------------CCGGGEEECCTTCEEEETTEEEEEEECCCHHHH
T ss_pred -ChHHHHHHHhcCCCCcEEEecHHHHHHHHHc-C-------------CChhhEEEeCCCCEEEECCEEEEEEeccccccc
Confidence 4444333211111278999999888777652 0 0111344554 5788999999999999884
Q ss_pred ----------CC-------ceEEEEEEc----cEEEeCCCCCCCcchhhhc--CCCCEEEEcccCCCCCCCCCCCHHHHH
Q 020812 241 ----------AG-------YRSLGFRFG----NICYISDVSEIPEETYPFL--QDCEILIMDALRPDRSSSTHFGLPRVD 297 (321)
Q Consensus 241 ----------~g-------~~s~g~~i~----~i~ysGDt~~~~~~~~~~~--~~~dlli~ea~~~~~~~~~H~~~~~a~ 297 (321)
+| ..++||+++ +++|+||+.+.++ +.+.. .++|+++++..........|++.++|+
T Consensus 213 ~~~p~~h~~~~G~~~~~~~~~~~g~~i~~~g~~i~~sGDt~~~~~-~~~i~~~~~~Dv~il~~g~~~~~~~~h~~~~ea~ 291 (379)
T 3bv6_A 213 VTLPKGVSSYDKAILDGMDERAVNYLIETSGGSVYHSGDSHYSNY-YAKHGNDYQIDVALLSYGENPRGVTDKMTSSDVL 291 (379)
T ss_dssp TCCCTTSCSSCGGGGGCHHHHBEEEEEEETTEEEEECTTCCCCTT-HHHHHHHSCCSEEEEEBCCCCTTCCCSBCHHHHH
T ss_pred ccccccccccccccccccCCceEEEEEEeCCeEEEEeCCCCccHH-HHHHhhcCCCCEEEecCCCCcccccccCCHHHHH
Confidence 22 137999995 8999999998754 43332 278999997754222346799999999
Q ss_pred HHHHHhCC-eEEEEeccC
Q 020812 298 KFLAYSGN-QFTLSNMSL 314 (321)
Q Consensus 298 ~~~~~~~~-~~vltH~~~ 314 (321)
++++++++ +++++|++.
T Consensus 292 ~~~~~l~~k~vi~~H~~~ 309 (379)
T 3bv6_A 292 RAAESLDCQVVVPFHHDI 309 (379)
T ss_dssp HHHHHHTCSEEEEESTTS
T ss_pred HHHHHcCCCEEEEEeecc
Confidence 99999998 999999865
No 14
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=99.85 E-value=8.6e-21 Score=169.75 Aligned_cols=176 Identities=17% Similarity=0.202 Sum_probs=127.3
Q ss_pred cEEEEEecCCCCCceEEEecCCCchH-----------HHHhhccc--CCC----CCccEEEecCCchhhhcChHHHHHhh
Q 020812 112 TSILIRYPGPSGRRNILIDAGKFFYH-----------SALRWFPA--YGI----RTIDAVIITHSHADAIGGLDDLRDWT 174 (321)
Q Consensus 112 ss~lI~~~~~~~~~~iLID~G~~~~~-----------~l~~~l~~--~~~----~~Id~V~iTH~H~DH~~Gl~~l~~~~ 174 (321)
+|++|+. ++.+||||++..... ++...+.. ..+ .+||+|+|||.|.||++++..+..
T Consensus 13 a~~li~~----~g~~iLiDp~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~id~iliTH~H~DH~~~~~~~~~-- 86 (264)
T 3rpc_A 13 ATGKLTI----KNTTFLIDPFLAPKDTYPGFEGTFNYQQRMPMVDLPLSMDDLLSNVTAVVVTHTHLDHWDDTAINSI-- 86 (264)
T ss_dssp TEEEEEE----TTEEEEESCCCCCTTCBCCCTTBTTTTSCBSSSCCSSCHHHHHTTCCEEECSCCCGGGSCHHHHHHS--
T ss_pred cEEEEEE----CCEEEEeCcccCCCcCccCCCCcccccccCCCCCCCCCHHHccccCCEEEECCCchhhCCCHHHHhh--
Confidence 3889994 789999999643211 00000011 111 278999999999999999876654
Q ss_pred ccccccccEEec-hhhHHHHHhhccccccccCCCCCCCccceeeEEeCCceEEECCEEEEEEEeccCCCc----------
Q 020812 175 NNVQRHIPIYVA-MRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAGY---------- 243 (321)
Q Consensus 175 ~~~~~~~~v~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~H~~g~---------- 243 (321)
..+++||++ ....+.+.+. |. . +...+ ++.+++++++|+++|+.|+++.
T Consensus 87 ---~~~~~v~~~~~~~~~~l~~~------------g~--~--~~~~~-~~~~~~~~~~i~~~pa~H~~~~~~~~p~~~~~ 146 (264)
T 3rpc_A 87 ---PKSLPIFVQNTADKELITSQ------------GF--I--DVRII-FESLEFNGITLRKTGGSHGTVEMYANPVLAPL 146 (264)
T ss_dssp ---CTTSCEEESSHHHHHHHHHT------------TC--S--CEEEC-SSEEEETTEEEEEECCCSSCHHHHTSTTHHHH
T ss_pred ---ccCCeEEEeCHHHHHHHHhc------------CC--C--eeEEe-cccEEECCEEEEEeccccCCcccccccccccc
Confidence 346899999 7777666542 10 0 12233 3688999999999999999852
Q ss_pred --eEEEEEEc-----cEEEeCCCCCCCcchhhhc--CCCCEEEEcccCCCCC---CCCCCCHHHHHHHHHHhCC-eEEEE
Q 020812 244 --RSLGFRFG-----NICYISDVSEIPEETYPFL--QDCEILIMDALRPDRS---SSTHFGLPRVDKFLAYSGN-QFTLS 310 (321)
Q Consensus 244 --~s~g~~i~-----~i~ysGDt~~~~~~~~~~~--~~~dlli~ea~~~~~~---~~~H~~~~~a~~~~~~~~~-~~vlt 310 (321)
..+||+++ +++|+|||.++++ +.+.. .++|++++++...... ...|++.+||.++++.+++ +++++
T Consensus 147 ~~~~~g~~i~~~~~~~i~~~GDt~~~~~-~~~~~~~~~~Dv~il~~g~~~~~~~~~~~hm~~~ea~~~~~~l~~~~vi~~ 225 (264)
T 3rpc_A 147 AGDAMGVIFEAADEPTVYLVGDTVWTSD-VEKALLRFDPNVIIMNTGYAQILGFEDSIIMGTKDIGRMVVRKPEAKIIAV 225 (264)
T ss_dssp HCCCCEEEEECTTSCCEEECCSCCSCHH-HHHHHHHHCCSEEEEECSCBCBTTCSSCSSCCHHHHHHHHHHCTTSEEEEE
T ss_pred ccccEEEEEEeCCccEEEEECCcCchHH-HHHHHHHhCCCEEEEecCccccccccCCcccCHHHHHHHHHhCCcCeEEEE
Confidence 36899984 8999999999854 54433 2599999999853221 4689999999999999997 99999
Q ss_pred eccC
Q 020812 311 NMSL 314 (321)
Q Consensus 311 H~~~ 314 (321)
|++.
T Consensus 226 H~~~ 229 (264)
T 3rpc_A 226 HMDT 229 (264)
T ss_dssp SCSS
T ss_pred cccc
Confidence 9974
No 15
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=99.85 E-value=2.6e-20 Score=179.41 Aligned_cols=189 Identities=19% Similarity=0.180 Sum_probs=124.5
Q ss_pred CCceEEEEEcccCCCCcccccccCCCCCCCcccccccCCCCCCcccccEEEEEecCCCCCceEEEecCCCch---HHHHh
Q 020812 65 AQQSEIVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGNKNRRLNTSILIRYPGPSGRRNILIDAGKFFY---HSALR 141 (321)
Q Consensus 65 ~~~~~i~~LGtG~s~g~P~~~~~~~~~~~c~~c~~~~~~~~~~~r~~ss~lI~~~~~~~~~~iLID~G~~~~---~~l~~ 141 (321)
.+.|+|++||+|+.. +.+|++|+. ++..||||||.+.. .....
T Consensus 9 ~~~m~i~~LG~~~~v------------------------------g~s~~li~~----~~~~iLID~G~~~~~~~~~~~~ 54 (459)
T 2i7t_A 9 SDQLLIRPLGAGQEV------------------------------GRSCIILEF----KGRKIMLDCGIHPGLEGMDALP 54 (459)
T ss_dssp CEEEEEEEEESSSSS------------------------------SSCEEEEEE----TTEEEEECCCCCTTSCGGGGSC
T ss_pred CCeEEEEEEecCCCC------------------------------CCCEEEEEE----CCeEEEEeCCCCcCcccccccC
Confidence 356999999988642 246999994 78899999998521 12222
Q ss_pred hcccCCCCCccEEEecCCchhhhcChHHHHHhhccccccccEEechhhHHHHHhhcccccccc------CCCCCCCcc--
Q 020812 142 WFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTS------GIIPGAAVS-- 213 (321)
Q Consensus 142 ~l~~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~------~~~~~~~~~-- 213 (321)
.+...++.+||+|||||.|.||++|++.+.... ..+.+||+++.+.+.+........... ..+......
T Consensus 55 ~l~~~~~~~Id~VllTH~H~DH~ggl~~l~~~~---~~~~~iy~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~~ 131 (459)
T 2i7t_A 55 YIDLIDPAEIDLLLISHFHLDHCGALPWFLQKT---SFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEES 131 (459)
T ss_dssp CGGGSCGGGCCEEECCCSSHHHHTTHHHHHHHS---SCCSEEEEEHHHHHHHHHHHHHHCC---------CCCHHHHHHH
T ss_pred cccccCcccCcEEEECCCChhhhhhhHHHHHhc---CCCCCEEechHHHHHHHHHHHHHHHHhcccccccccCHHHHHHH
Confidence 233466789999999999999999999987542 124789999888665443221110000 000000000
Q ss_pred ceeeEEeC-CceEEECCEEEEEEEeccCCCceEEEEEEc----cEEEeCCCCCCCcchhh--h--cCCCCEEEEcccCCC
Q 020812 214 ELQFNIID-EEPFTVQDLKITPLPVWHGAGYRSLGFRFG----NICYISDVSEIPEETYP--F--LQDCEILIMDALRPD 284 (321)
Q Consensus 214 ~~~~~~~~-~~~~~~~~~~v~~~p~~H~~g~~s~g~~i~----~i~ysGDt~~~~~~~~~--~--~~~~dlli~ea~~~~ 284 (321)
...+..++ ++.++++++++++++..|++| +++|.++ +++|+||+...++.... . ..++|+||+|+++.+
T Consensus 132 ~~~~~~~~~~~~~~~~gi~v~~~~~GH~~G--s~~~~i~~~~~~il~sGD~~~~~~~~~~~~~~~~~~~D~Li~Esty~~ 209 (459)
T 2i7t_A 132 MDKIETINFHEVKEVAGIKFWCYHAGHVLG--AAMFMIEIAGVKLLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGT 209 (459)
T ss_dssp GGGEEEECTTCCEEETTEEEEEEECCSSTT--CEEEEEEETTEEEEECCSCCCC-----CCCCCCSSCCSEEEEECTTTT
T ss_pred HhccEEeCCCCEEEECCEEEEEEeCCCccC--cEEEEEEECCcEEEEeCCCCCCCCcccCCCCcCCCCCeEEEECCCCCC
Confidence 01345555 578889999999999999996 5777775 89999999876543221 1 247999999999976
Q ss_pred CCCCCCCCHHH
Q 020812 285 RSSSTHFGLPR 295 (321)
Q Consensus 285 ~~~~~H~~~~~ 295 (321)
. .|.+.++
T Consensus 210 ~---~~~~~~~ 217 (459)
T 2i7t_A 210 H---IHEKREE 217 (459)
T ss_dssp C---CCCCHHH
T ss_pred C---CCCChHH
Confidence 3 3555443
No 16
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=99.85 E-value=2.5e-20 Score=183.55 Aligned_cols=188 Identities=18% Similarity=0.249 Sum_probs=127.2
Q ss_pred ccEEEEEecCCCCCceEEEecCCCchHH----------HHhhcccCCCCCccEEEecCCchhhhcChHHHHHhhcccccc
Q 020812 111 NTSILIRYPGPSGRRNILIDAGKFFYHS----------ALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRH 180 (321)
Q Consensus 111 ~ss~lI~~~~~~~~~~iLID~G~~~~~~----------l~~~l~~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~ 180 (321)
.+|++|+. ++..+|||||.+.... ..+++ ..+..+|++|||||.|.||++|++.+.+.+.....+
T Consensus 30 ~n~~li~~----~~~~iLID~G~~~~~~~~~g~~~~~p~~~~l-~~~~~~Id~I~iTH~H~DHiggl~~L~~~~~~~~~~ 104 (562)
T 3bk2_A 30 KNITVFRF----RDEIFVLDGGLAFPEEGMPGVDLLIPRVDYL-IEHRHKIKAWVLTHGHEDHIGGLPFLLPMIFGKESP 104 (562)
T ss_dssp CCEEEEEE----TTEEEEECCCCBCCCTTSTTCCEEEECCHHH-HHTGGGEEEEECCCCCHHHHTTHHHHHHHHHCSCCC
T ss_pred CCEEEEEE----CCeEEEEECCCCCCccccccccccccchhhh-hcCcccCcEEEECCCChHHhCCHHHHHHhhccccCC
Confidence 46899995 7789999999753211 01111 124578999999999999999999998753222236
Q ss_pred ccEEechhhHHHHHhhccccccccCCCCCCCccceeeEEeC-CceEEECC-EEEEEEEecc-CCCceEEEEEEc----cE
Q 020812 181 IPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQD-LKITPLPVWH-GAGYRSLGFRFG----NI 253 (321)
Q Consensus 181 ~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~v~~~p~~H-~~g~~s~g~~i~----~i 253 (321)
++||+++.+.+.+....... +.......+..++ ++.+++++ ++|+++++.| .+ .+++|.++ ++
T Consensus 105 ~pIy~~~~t~~~l~~~l~~~--------~~~~~~~~~~~v~~g~~~~lg~~~~v~~~~~~H~~~--gs~~~~i~~~~~~i 174 (562)
T 3bk2_A 105 VPIYGARLTLGLLRGKLEEF--------GLRPGAFNLKEISPDDRIQVGRYFTLDLFRMTHSIP--DNSGVVIRTPIGTI 174 (562)
T ss_dssp SEEEEEHHHHHHHHHHHHHT--------TCCSTTSEEEEECTTCEEEETTTEEEEEEECCCSSS--SCEEEEEEETTEEE
T ss_pred ceEEeCHHHHHHHHHHHHHc--------CCCcCCceEEEECCCCEEEeCCCEEEEEEECCCCCc--ccEEEEEEECCeEE
Confidence 89999999988776543211 0000022455565 57899998 9999999999 45 47888884 89
Q ss_pred EEeCCCCCCCc----------chhhhc-CCCCEEEEcccCCCCCCCCCCCHH-----HHHHHHHHhCCeEEEEeccCC
Q 020812 254 CYISDVSEIPE----------ETYPFL-QDCEILIMDALRPDRSSSTHFGLP-----RVDKFLAYSGNQFTLSNMSLT 315 (321)
Q Consensus 254 ~ysGDt~~~~~----------~~~~~~-~~~dlli~ea~~~~~~~~~H~~~~-----~a~~~~~~~~~~~vltH~~~~ 315 (321)
+|+||+..... .+.+.. +++|+|++|+|+.+.. +|...+ ++.+++++.+.+++++||+++
T Consensus 175 l~tGD~~~~~~~~~g~~~d~~~l~~~~~~~~d~Li~EsT~~~~~--g~~~~e~~v~~~l~~~~~~~~grvii~~fas~ 250 (562)
T 3bk2_A 175 VHTGDFKLDPTPIDGKVSHLAKVAQAGAEGVLLLIADATNAERP--GYTPSEMEIAKELDRVIGRAPGRVFVTTFASH 250 (562)
T ss_dssp EECCSCCCCSSCTTSCCCCCHHHHHHHHHCCSEEEEECTTTTCC--SCCCCHHHHHHHHHHHHHHCSSCEEEECCTTC
T ss_pred EEcCCCCCCCCCCCCCcccHHHHHHhhccCCCEEEecccCCCCC--CCCChHHHHHHHHHHHHHhCCCEEEEEEcccc
Confidence 99999964211 122222 5899999999987532 333332 333455555569999999854
No 17
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=99.83 E-value=8.1e-20 Score=182.80 Aligned_cols=211 Identities=19% Similarity=0.225 Sum_probs=135.5
Q ss_pred CCCceEEEEEcccCCCCcccccccCCCCCCCcccccccCCCCCCcccccEEEEEecCCCCCceEEEecCCCchH-----H
Q 020812 64 PAQQSEIVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGNKNRRLNTSILIRYPGPSGRRNILIDAGKFFYH-----S 138 (321)
Q Consensus 64 ~~~~~~i~~LGtG~s~g~P~~~~~~~~~~~c~~c~~~~~~~~~~~r~~ss~lI~~~~~~~~~~iLID~G~~~~~-----~ 138 (321)
..+.|+|++||+|+.. +.+|++|+. ++..+|||||.+... .
T Consensus 185 ~~~~m~i~~LG~~~~v------------------------------g~s~~LI~~----~~~~ILID~G~~~~~~~~g~~ 230 (651)
T 3af5_A 185 KSRWIRITGLGGFREV------------------------------GRSALLVQT----DESFVLVDFGVNVAMLNDPYK 230 (651)
T ss_dssp CCSCEEEEEEECSSSS------------------------------SCCEEEEEE----SSCEEEECCCCCGGGTTCHHH
T ss_pred CCCceEEEEEecCCCC------------------------------CCcEEEEEE----CCcEEEEeCCCChhccccchh
Confidence 3467999999988642 146999994 788999999987421 2
Q ss_pred HHhhcc--cC--CC--CCccEEEecCCchhhhcChHHHHHhhccccccccEEechhhHHHHHhhcccccc---c---cCC
Q 020812 139 ALRWFP--AY--GI--RTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVD---T---SGI 206 (321)
Q Consensus 139 l~~~l~--~~--~~--~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~---~---~~~ 206 (321)
....+. .. ++ .+||+|||||.|.||++|++.+.+.. ..+++||+++.+.+.+......... . ...
T Consensus 231 ~l~~l~~~~~g~~~~~~~Id~VllTH~H~DHiGglp~L~~~~---~~~~pIy~t~~t~~ll~~~l~d~~~~~~~~~~~~~ 307 (651)
T 3af5_A 231 AFPHFDAPEFQYVLREGLLDAIIITHAHLDHCGMLPYLFRYN---LFDGPIYTTPPTRDLMVLLQKDFIEIQQSNGQDPL 307 (651)
T ss_dssp HSCCTTCHHHHHHHHTTCCCEEECSCSSHHHHTTHHHHHHTT---CCCSCEEECHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred hcccccchhhccCcccCCCCEEEECCCChHhhcCHHHHHhcC---CCCceEEEcHHHHHHHHHHHHHHHHHhhhcccCCC
Confidence 222211 02 34 68999999999999999999998631 0257999999987765532211000 0 000
Q ss_pred CCCCCcc--ceeeEEeC-CceEEE-CCEEEEEEEeccCCCceEEEEEEc------cEEEeCCCCCCCcchhh----hcCC
Q 020812 207 IPGAAVS--ELQFNIID-EEPFTV-QDLKITPLPVWHGAGYRSLGFRFG------NICYISDVSEIPEETYP----FLQD 272 (321)
Q Consensus 207 ~~~~~~~--~~~~~~~~-~~~~~~-~~~~v~~~p~~H~~g~~s~g~~i~------~i~ysGDt~~~~~~~~~----~~~~ 272 (321)
+...... ...+..++ ++.+++ ++++++++++.|++| +++|.++ +++|+||+.+.++.+.+ ...+
T Consensus 308 ~~~~~~~~~~~~~~~l~~g~~~~l~ggi~v~~~~~gH~~G--s~~~~i~~~~~~~~ilftGD~~~~~~~ll~~~~~~~~~ 385 (651)
T 3af5_A 308 YRPRDIKEVIKHTITLDYGEVRDISPDIRLTLHNAGHILG--SAIVHLHIGNGLHNIAITGDFKFIPTRLLEPANAKFPR 385 (651)
T ss_dssp SCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEECSSSTT--CEEEEEEETTTTTCEEECCSCCCSCCSSCCCCCCBCSS
T ss_pred CCHHHHHHhhhcEEEeCCCCEEEecCCEEEEEecCCCCcC--cEEEEEEECCCceEEEEeCCCCCCcccccccccccCCC
Confidence 0000000 01244454 578888 999999999999996 4667763 79999999876554433 2468
Q ss_pred CCEEEEcccCCCCC--CCCCCCH-HHHHHHHHHh---CCeEEEEecc
Q 020812 273 CEILIMDALRPDRS--SSTHFGL-PRVDKFLAYS---GNQFTLSNMS 313 (321)
Q Consensus 273 ~dlli~ea~~~~~~--~~~H~~~-~~a~~~~~~~---~~~~vltH~~ 313 (321)
+|+|++|+|+.+.. ++.+... ++..+.+.+. +.++++..|+
T Consensus 386 ~DvLI~EsT~~~~~~~h~s~~~~~~~l~~~i~~~l~~~g~vlIp~fa 432 (651)
T 3af5_A 386 LETLVMESTYGGANDIQMPREEAEKRLIEVIHNTIKRGGKVLIPAMA 432 (651)
T ss_dssp CSEEEEECTTCSTTCCCCCHHHHHHHHHHHHHHHHHTTCEEEEECCT
T ss_pred CCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEeccC
Confidence 99999999998643 3332222 2333444442 3366666654
No 18
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=99.83 E-value=1.5e-19 Score=180.41 Aligned_cols=208 Identities=18% Similarity=0.212 Sum_probs=136.3
Q ss_pred CCCceEEEEEcccCCCCcccccccCCCCCCCcccccccCCCCCCcccccEEEEEecCCCCCceEEEecCCCch----HHH
Q 020812 64 PAQQSEIVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGNKNRRLNTSILIRYPGPSGRRNILIDAGKFFY----HSA 139 (321)
Q Consensus 64 ~~~~~~i~~LGtG~s~g~P~~~~~~~~~~~c~~c~~~~~~~~~~~r~~ss~lI~~~~~~~~~~iLID~G~~~~----~~l 139 (321)
..+.|+|++||+|+.. +.+|++|+ .++..+|||||.+.. ...
T Consensus 176 ~~~~m~i~~LG~~~ev------------------------------g~s~~lI~----~~~~~ILID~G~~~~~~~~~~~ 221 (636)
T 2ycb_A 176 DNDWARLTAMGGFREV------------------------------GRSCLYLQ----TPNSRVLLDCGVNVAGGDDKNS 221 (636)
T ss_dssp CCCCCEEEEEESSSSS------------------------------SCCEEEEE----CSSCEEEEEECCCCSSCCHHHH
T ss_pred CCCeEEEEEEecCCCC------------------------------CCCEEEEE----ECCeEEEEeCCCCcccccchhh
Confidence 3467999999987642 24699999 478899999998742 233
Q ss_pred Hhhcc--cCCCCCccEEEecCCchhhhcChHHHHHhhccccccccEEechhhHHHHHhhccccccc------cCCCCCCC
Q 020812 140 LRWFP--AYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDT------SGIIPGAA 211 (321)
Q Consensus 140 ~~~l~--~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~------~~~~~~~~ 211 (321)
...+. +.++.+||+|||||.|.||++|++.+.+. ..+++||+++.+.+.+.......... ...+....
T Consensus 222 ~~~l~~l~~~~~~Id~VlLTH~H~DHiGglp~L~~~----~~~~~Iy~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~ 297 (636)
T 2ycb_A 222 YPYLNVPEFTLDSLDAVIITHAHLDHSGFLPYLYHY----GYDGPVYCTAPTRDLMTLLQLDHIDIAHREDEPLPFNVKH 297 (636)
T ss_dssp SCCTTSTTCCTTTCCEEECSSSSHHHHTTHHHHHHT----TCCSCEEECHHHHHHHHHHHHHHHHHHHHHTCCCSCCHHH
T ss_pred ccccccccCCcccCcEEEECCCChHHhcCHHHHHhc----CCCCeEEEcchHHHHHHHHHHHHHHhhhhcCCCCCCCHHH
Confidence 33333 24568999999999999999999998763 23689999998877654322110000 00000000
Q ss_pred cc--ceeeEEeC-CceEEE-CCEEEEEEEeccCCCceEEEEEEc------cEEEeCCCCCCCcchhh----hcCCCCEEE
Q 020812 212 VS--ELQFNIID-EEPFTV-QDLKITPLPVWHGAGYRSLGFRFG------NICYISDVSEIPEETYP----FLQDCEILI 277 (321)
Q Consensus 212 ~~--~~~~~~~~-~~~~~~-~~~~v~~~p~~H~~g~~s~g~~i~------~i~ysGDt~~~~~~~~~----~~~~~dlli 277 (321)
.. ...+..++ ++.+++ +++++++++..|++| +++|.++ +++|+||+.+.++.+.+ ...++|+|+
T Consensus 298 i~~~~~~~~~l~~g~~~~l~ggi~v~~~~~gH~~G--s~~~~i~~~~~~~~ilftGD~~~~~~~ll~~~~~~~~~~D~LI 375 (636)
T 2ycb_A 298 VKKSVKHTITLDYGEVTDIAPDIRLTLHNAGHILG--SAMAHLHIGDGQHNMVYTGDFKYEQSRLLEAAANRFPRIETLV 375 (636)
T ss_dssp HHHHHHTEEECCTTCCEEEETTEEEEEEECCSSTT--CEEEEEEETTTTTCEEECCSCCSSCCSSSCCCCCCCSCCSEEE
T ss_pred HHHHHhceEEeCCCCEEEecCCeEEEEeCCCCCCC--cEEEEEEECCCeEEEEEECCCCCCcccccCCcccCCCCCeEEE
Confidence 00 01234454 578888 999999999999996 4677763 79999999876543433 246899999
Q ss_pred EcccCCCCCCCCCCCH----HHHHHHHHH---hCCeEEEEec
Q 020812 278 MDALRPDRSSSTHFGL----PRVDKFLAY---SGNQFTLSNM 312 (321)
Q Consensus 278 ~ea~~~~~~~~~H~~~----~~a~~~~~~---~~~~~vltH~ 312 (321)
+|+|+.+.. ..|.+. ++..+.+++ .+.++++..|
T Consensus 376 ~EsT~~~~~-~~h~s~~~~~~~l~~~i~~~~~~~g~vlIp~f 416 (636)
T 2ycb_A 376 MESTYGGHE-DVQPSRNRAEKELVKTIYSTLRRGGKILIPVF 416 (636)
T ss_dssp EECTTCSGG-GCCCCHHHHHHHHHHHHHHHHHHTCCEEEECC
T ss_pred ECCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEC
Confidence 999997643 224433 344455554 3456555544
No 19
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=99.82 E-value=1.3e-19 Score=180.97 Aligned_cols=208 Identities=19% Similarity=0.201 Sum_probs=133.0
Q ss_pred CCceEEEEEcccCCCCcccccccCCCCCCCcccccccCCCCCCcccccEEEEEecCCCCCceEEEecCCCchH--HHHhh
Q 020812 65 AQQSEIVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGNKNRRLNTSILIRYPGPSGRRNILIDAGKFFYH--SALRW 142 (321)
Q Consensus 65 ~~~~~i~~LGtG~s~g~P~~~~~~~~~~~c~~c~~~~~~~~~~~r~~ss~lI~~~~~~~~~~iLID~G~~~~~--~l~~~ 142 (321)
.+.|+|++||+|+.. +.+|++|+ .++..+|||||.+... .....
T Consensus 181 ~~~m~I~~LG~~~ev------------------------------g~s~~LI~----~~~~~ILID~G~~~~~~~~~l~~ 226 (640)
T 2xr1_A 181 DQWVRVTALGGCKEV------------------------------GRSCFLLS----TPESRILIDCGVNVGSDENMTPY 226 (640)
T ss_dssp CCCCEEEEEECSSSS------------------------------BCCEEEEE----CSSCEEEECCCCBCSSCSSCCCC
T ss_pred CCceEEEEEecCCCC------------------------------CCcEEEEE----ECCeEEEEeCCCCcccccccccc
Confidence 467999999987642 24699999 4788999999987421 22222
Q ss_pred cc--cC-CCCCccEEEecCCchhhhcChHHHHHhhccccccccEEechhhHHHHHhhccccc---cc---cCCCCCCCcc
Q 020812 143 FP--AY-GIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLV---DT---SGIIPGAAVS 213 (321)
Q Consensus 143 l~--~~-~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~---~~---~~~~~~~~~~ 213 (321)
+. +. ++.+||+|||||.|.||++|++.+.+. ..+++||+++.+.+.+........ .. ...+......
T Consensus 227 l~~~~~~~~~~Id~VllTH~H~DHiGgl~~L~~~----~~~~~Iy~t~~t~~ll~~~l~d~~~~~~~~g~~~~~~~~~~~ 302 (640)
T 2xr1_A 227 LYVPEVFPLNQIDAVIVTHAHLDHQGLVPLLFKY----GYEGPVYCTPPTRDLMVLLQLDYIDVAAKEGKKIPYESGMVA 302 (640)
T ss_dssp TTSTTTCSGGGCCEEECCSSCHHHHTTHHHHHHT----TCCSCEEECHHHHHHHHHHHHHHHHHHHHHTCCCCSCHHHHH
T ss_pred ccccccCCcccCcEEEECCCChhhhccHHHHHhc----CCCCeEEECHHHHHHHHHHHHHHHHHhhhcccCCCCCHHHHH
Confidence 22 13 567899999999999999999999863 235799999988776543221100 00 0000000000
Q ss_pred --ceeeEEeC-CceEEE-CCEEEEEEEeccCCCceEEEEEEc------cEEEeCCCCCCCcchhh----hcCCCCEEEEc
Q 020812 214 --ELQFNIID-EEPFTV-QDLKITPLPVWHGAGYRSLGFRFG------NICYISDVSEIPEETYP----FLQDCEILIMD 279 (321)
Q Consensus 214 --~~~~~~~~-~~~~~~-~~~~v~~~p~~H~~g~~s~g~~i~------~i~ysGDt~~~~~~~~~----~~~~~dlli~e 279 (321)
...+..++ ++.+++ +++++++++..|++| +++|.++ +++|+||+...++.+.+ ...++|+|++|
T Consensus 303 ~~~~~~~~l~~g~~i~l~gg~~v~~~~~GH~~G--s~~~~i~~~~~~~~ilftGD~~~~~~~ll~~~~~~~~~~DvLi~E 380 (640)
T 2xr1_A 303 KTLKHTIPLDYEEVTDIAPDIKLTFHNAGHILG--SAISHFHIGDGLHNVVFTGDYKYEKTRLFDPAVNKFPRVETVISE 380 (640)
T ss_dssp HHHHTEEECCTTCCEEEETTEEEEEEECSSSTT--CEEEEEEETTTTEEEEECCSCCSSCCSSCCCCCCBCSCCSEEEEE
T ss_pred HHHhceEEeCCCCEEEecCCEEEEEEcCCCCcC--cEEEEEEECCceEEEEEECCCCCCCccccccccccCCCCcEEEEC
Confidence 01244454 578888 999999999999986 4667663 69999999876543433 24589999999
Q ss_pred ccCCCCCCCCCCCHH----HHHHHHHHh---CCeEEEEecc
Q 020812 280 ALRPDRSSSTHFGLP----RVDKFLAYS---GNQFTLSNMS 313 (321)
Q Consensus 280 a~~~~~~~~~H~~~~----~a~~~~~~~---~~~~vltH~~ 313 (321)
+++.+.. ..|.+.. +..+.++.. +.++++..|+
T Consensus 381 sT~g~~~-~~h~s~~~~~~~l~~~i~~~~~~~g~vlIp~fa 420 (640)
T 2xr1_A 381 ATYGNAN-AFQPALKDAEKHLQMVVKNTIERGGIAVIPAFA 420 (640)
T ss_dssp CTTCSTT-CCCCCHHHHHHHHHHHC--------CEEEECCT
T ss_pred CCCCCCc-cCCCCHHHHHHHHHHHHHHHHhcCCeEEEEecc
Confidence 9997633 2354433 333333332 2366666554
No 20
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=99.82 E-value=6.3e-19 Score=173.09 Aligned_cols=183 Identities=17% Similarity=0.251 Sum_probs=126.4
Q ss_pred ccEEEEEecCCCCCceEEEecCCCchHH-H---------HhhcccCCCCCccEEEecCCchhhhcChHHHHHhhcccccc
Q 020812 111 NTSILIRYPGPSGRRNILIDAGKFFYHS-A---------LRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRH 180 (321)
Q Consensus 111 ~ss~lI~~~~~~~~~~iLID~G~~~~~~-l---------~~~l~~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~ 180 (321)
.+|++|+. ++..+|||||.+.... . .+++ .....+|++||+||.|.||++|++.+.+.+ +
T Consensus 22 ~n~~li~~----~~~~iLID~G~~~~~~~~~g~d~iip~~~~l-~~~~~~Id~I~lTH~H~DHiggl~~l~~~~-----~ 91 (555)
T 3zq4_A 22 KNTYAVQF----QDEIVLIDAGIKFPEDELLGIDYVIPDYTYL-VKNEDKIKGLFITHGHEDHIGGIPYLLRQV-----N 91 (555)
T ss_dssp CCEEEEEE----TTEEEEEEECCBCCCTTSTTCSEEEECCHHH-HTTTTTEEEEEESCCCHHHHTTHHHHHTTC-----C
T ss_pred CEEEEEEE----CCeEEEEeCCCCCCccccccccccccCHHHH-hcCccCCCEEEECCCchhhhCCHHHHHHhc-----C
Confidence 46999994 7899999999753211 0 1111 134579999999999999999999998642 6
Q ss_pred ccEEechhhHHHHHhhccccccccCCCCCCCccceeeEEeC-CceEEECCEEEEEEEecc-CCCceEEEEEEc----cEE
Q 020812 181 IPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPVWH-GAGYRSLGFRFG----NIC 254 (321)
Q Consensus 181 ~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~p~~H-~~g~~s~g~~i~----~i~ 254 (321)
++||+++.+.+.+.......- . .....+..++ ++.+++++++++++++.| ++ .+++|.++ +++
T Consensus 92 ~pIy~t~~t~~ll~~~l~~~~----~-----~~~~~~~~v~~g~~~~ig~~~v~~~~~~H~~p--gs~~~~i~~~~~~il 160 (555)
T 3zq4_A 92 IPVYGGKLAIGLLRNKLEEHG----L-----LRQTKLNIIGEDDIVKFRKTAVSFFRTTHSIP--DSYGIVVKTPPGNIV 160 (555)
T ss_dssp CCEEECHHHHHHHHHHHHHHS----T-----TTTCCEEECCTTCCEEETTEEEEEEEEBCSSS--SEEEEEEEETTEEEE
T ss_pred ceEEECHHHHHHHHHHHHHcC----c-----cCCCceEEeCCCCEEEECCEEEEEEeCCCCCc--CcEEEEEEECCcEEE
Confidence 889999999887765432110 0 0112455555 678999999999999999 66 47888884 899
Q ss_pred EeCCCCCCCc------chhhhc----CCCCEEEEcccCCCCCCCCCCCHHHHHHHHH----HhCCeEEEEeccCC
Q 020812 255 YISDVSEIPE------ETYPFL----QDCEILIMDALRPDRSSSTHFGLPRVDKFLA----YSGNQFTLSNMSLT 315 (321)
Q Consensus 255 ysGDt~~~~~------~~~~~~----~~~dlli~ea~~~~~~~~~H~~~~~a~~~~~----~~~~~~vltH~~~~ 315 (321)
|+||+..... .+..+. +++|+|++|+|+.+... ...+-.++.+.+. +.+.++++++|+.+
T Consensus 161 ~tGD~~~~~~~~~g~~d~~~l~~l~~~~~d~Li~esT~~~~~~-~~~se~~v~~~i~~~~~~~~grvii~~fasn 234 (555)
T 3zq4_A 161 HTGDFKFDFTPVGEPANLTKMAEIGKEGVLCLLSDSTNSENPE-FTMSERRVGESIHDIFRKVDGRIIFATFASN 234 (555)
T ss_dssp ECCSCBCCSSCSSSCCCHHHHHHHHHTCEEEEEEECTTTTCCS-CCCCHHHHHHHHHHHHHHCCSCEEEECCTTC
T ss_pred EeCCCCCCCCcCcCccCHHHHHHhcccCCcEEEecCcccCCCC-CCCCHHHHHHHHHHHHHhCCCEEEEEEChhH
Confidence 9999975432 121222 57999999999987432 2344444444333 33559999998754
No 21
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=99.81 E-value=3e-19 Score=179.80 Aligned_cols=186 Identities=12% Similarity=0.128 Sum_probs=117.9
Q ss_pred cccEEEEEecCCCCCceEEEecCCCch----HHHHhhcccCCCCCccEEEecCCchhhhcChHHHHHhhc-cccccccEE
Q 020812 110 LNTSILIRYPGPSGRRNILIDAGKFFY----HSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTN-NVQRHIPIY 184 (321)
Q Consensus 110 ~~ss~lI~~~~~~~~~~iLID~G~~~~----~~l~~~l~~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~-~~~~~~~v~ 184 (321)
+.+|++|+. ++..||||||.+.. ....+++.+... +|++|||||.|.||++|++.+.+.+. ....+++||
T Consensus 14 ~~n~~LIe~----~~~~ILID~G~~~~~~~~~~~l~~L~~~~~-~IdaVlLTH~H~DHiGgLp~L~~~~~~g~~~~~pIY 88 (717)
T 2i7x_A 14 TTVGSVVRF----DNVTLLIDPGWNPSKVSYEQCIKYWEKVIP-EIDVIILSQPTIECLGAHSLLYYNFTSHFISRIQVY 88 (717)
T ss_dssp SCCCEEEEE----TTEEEEECCCCCTTTSCHHHHHHHHHTTGG-GCCEEECCCSSHHHHTTHHHHHHHSHHHHHHTCEEE
T ss_pred CCCEEEEEE----CCeEEEEeCCCCcccchhhhHHHHHHhcCC-CCCEEEECCCChHHHCCHHHHHHhhhhcccCCceEE
Confidence 356999995 78899999998741 223233444444 89999999999999999999875321 001368999
Q ss_pred echhhHHHHHhhccccccccCCCCCC--------Ccc--ceeeEEeC-CceEEE----CCEEEEEEEeccCCCceEEEEE
Q 020812 185 VAMRDFEVMKKTHYYLVDTSGIIPGA--------AVS--ELQFNIID-EEPFTV----QDLKITPLPVWHGAGYRSLGFR 249 (321)
Q Consensus 185 ~~~~~~~~l~~~~~~~~~~~~~~~~~--------~~~--~~~~~~~~-~~~~~~----~~~~v~~~p~~H~~g~~s~g~~ 249 (321)
+++.+...+................. ... ...+..++ ++.+.+ ++++|+++++.|++| +++|.
T Consensus 89 ~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~l~~ge~i~l~~~~ggi~V~~~~aGHs~G--s~~~~ 166 (717)
T 2i7x_A 89 ATLPVINLGRVSTIDSYASAGVIGPYDTNKLDLEDIEISFDHIVPLKYSQLVDLRSRYDGLTLLAYNAGVCPG--GSIWC 166 (717)
T ss_dssp EEHHHHHHHHHHHHHHHHHTTSSSSBTTCCSCHHHHHHHHHTSEEECTTCCEEETTTTTTEEEEEEECSSSTT--CEEEE
T ss_pred ecchhHHHHHHHHHHHHHhhccccccccccccHHHHHhhhhceEEecCCCEEEEeecCCCEEEEEECCCCCCC--cEEEE
Confidence 99988765433211100000000000 000 01344555 577888 899999999999996 57787
Q ss_pred Ec----cEEEeCCCCCCCcch-------------hhhcCCCCEEEEcccCCCCCCCCCCCHHHHHHHHHH
Q 020812 250 FG----NICYISDVSEIPEET-------------YPFLQDCEILIMDALRPDRSSSTHFGLPRVDKFLAY 302 (321)
Q Consensus 250 i~----~i~ysGDt~~~~~~~-------------~~~~~~~dlli~ea~~~~~~~~~H~~~~~a~~~~~~ 302 (321)
++ +++|+||+....+.+ +..+.++|+||+|+++.+..++.+...++..+.+.+
T Consensus 167 I~~~~~~IvytGD~~~~~~~~l~~~~~L~~~g~~l~~l~~~D~LI~EsTy~~~~h~~~~~~~~l~~~i~~ 236 (717)
T 2i7x_A 167 ISTYSEKLVYAKRWNHTRDNILNAASILDATGKPLSTLMRPSAIITTLDRFGSSQPFKKRSKIFKDTLKK 236 (717)
T ss_dssp EECSSCEEEECSSCCSSCCSSCCCCTTBCTTSCBCSTTSSCSEEEECCSCCCCSSCHHHHHHHHHHHHHH
T ss_pred EEeCCCEEEEECCCCCCcccccCccccccccchhHHhccCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHH
Confidence 74 899999997644322 133568999999999976443322223344444444
No 22
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=99.81 E-value=4.5e-19 Score=154.45 Aligned_cols=151 Identities=13% Similarity=0.191 Sum_probs=110.1
Q ss_pred cccccEEEEEecCCCCCceEEEecCCCchHHHHhhcccCCCCCccEEEecCCchhhhcChHHHHHhhccccccccEEech
Q 020812 108 RRLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAM 187 (321)
Q Consensus 108 ~r~~ss~lI~~~~~~~~~~iLID~G~~~~~~l~~~l~~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~ 187 (321)
.++++|++|+. ++..||||||.+.. . +. ....+||+|||||.|+||++ +..+. ++.+++
T Consensus 17 ~~~~~~~li~~----~~~~iLiD~g~~~~-~----~~-~~~~~id~VliTH~H~DH~~-~~~l~-------~~~~vi--- 75 (220)
T 1vjn_A 17 WFGHACFALEM----EGKTIVTDPFDESV-G----YP-IPNVTADVVTESHQHFDHNA-HHLVK-------GNFRVI--- 75 (220)
T ss_dssp EEETTEEEEEE----TTEEEEESCCC----------C-CCCCBCSEEECSSCC---CG-GGGCB-------SSCEEE---
T ss_pred EccCCEEEEEE----CCEEEEEcCCCCcC-C----CC-cCCCCcCEEEECCCCCCCCC-chHhc-------CCCEEE---
Confidence 35678999995 78999999998731 1 11 23568999999999999998 65332 122222
Q ss_pred hhHHHHHhhccccccccCCCCCCCccceeeEEeCCceEEECCEEEEEEEeccCCC-----ceEEEEEEc----cEEEeCC
Q 020812 188 RDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAG-----YRSLGFRFG----NICYISD 258 (321)
Q Consensus 188 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~H~~g-----~~s~g~~i~----~i~ysGD 258 (321)
..+..+++++++|+++++.|..+ ..++||+++ +++|+||
T Consensus 76 --------------------------------~~~g~~~~~~~~I~~~~~~H~~~~g~~~g~~~g~~i~~~g~~i~~~GD 123 (220)
T 1vjn_A 76 --------------------------------DRPGAYTVNGVKIKGVETFHDPSHGRERGKNIVFVFEGEGIKVCHLGD 123 (220)
T ss_dssp --------------------------------CSSEEEEETTEEEEEEEEEEC-------CEEEEEEEEETTEEEEECTT
T ss_pred --------------------------------cCCCeEEECCEEEEEEeeecCCCCCccCCCcEEEEEEECCeEEEEeCC
Confidence 01125678899999999999873 147999996 8999999
Q ss_pred CCCCCc-chhhhcCCCCEEEEcccCCCCCCCCCCCHHHHHHHHHHhCC-eEEEEeccCCC
Q 020812 259 VSEIPE-ETYPFLQDCEILIMDALRPDRSSSTHFGLPRVDKFLAYSGN-QFTLSNMSLTI 316 (321)
Q Consensus 259 t~~~~~-~~~~~~~~~dlli~ea~~~~~~~~~H~~~~~a~~~~~~~~~-~~vltH~~~~~ 316 (321)
+.+.++ +..+.++++|++++|+.. ..|++.++|.++++++++ +++++|++...
T Consensus 124 t~~~~~~~~~~~~~~~Dvlil~~g~-----~~h~~~~~a~~~~~~~~~k~vi~~H~~~~~ 178 (220)
T 1vjn_A 124 LGHVLTPAQVEEIGEIDVLLVPVGG-----TYTIGPKEAKEVADLLNAKVIIPMHYKTKY 178 (220)
T ss_dssp CCSCCCHHHHHHHCCCSEEEEECCS-----SSSCCHHHHHHHHHHTTCSEEEEESCCCSS
T ss_pred CCCcchHHHHHhhCCCCEEEEcCCC-----cCcCCHHHHHHHHHhcCCCEEEEEeccccc
Confidence 998764 345566789999999853 469999999999999997 99999998754
No 23
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A
Probab=99.76 E-value=1.2e-18 Score=156.10 Aligned_cols=170 Identities=21% Similarity=0.245 Sum_probs=109.9
Q ss_pred CceEEEEEcccCCCCcccccccCCCCCCCcccccccCCCCCCcccccEEEEEecCCCCCceEEEecCCCch---------
Q 020812 66 QQSEIVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGNKNRRLNTSILIRYPGPSGRRNILIDAGKFFY--------- 136 (321)
Q Consensus 66 ~~~~i~~LGtG~s~g~P~~~~~~~~~~~c~~c~~~~~~~~~~~r~~ss~lI~~~~~~~~~~iLID~G~~~~--------- 136 (321)
.+|+|++|++|... .|. ..|.....++.......+|+||+. +++.+|||||.+..
T Consensus 2 ~~~~i~~l~~G~~~-~~~-----------~~~~~~~~~~~~~~~~~~~~li~~----~~~~iLiD~G~~~~~~~~~~~~~ 65 (274)
T 3aj3_A 2 SDTKVYLLDGGSLV-LDG-----------YHVFWNRGPGGEVRFPVYSILIEH----AEGRFLIDTGYDYDHVMKVLPFE 65 (274)
T ss_dssp CCCEEEEEEEEEEE-EEH-----------HHHTTTTCCCSEEEEEEEEEEEEE----TTEEEEECCCCCHHHHHHHCGGG
T ss_pred CccEEEEEcCceEE-ech-----------HheecCCCCCcEEEeeEEEEEEEe----CCccEEEECCCCcccccCccccC
Confidence 36899999999863 332 222222212222234568999994 67899999999753
Q ss_pred -------HHHHhhcccCC--CCCccEEEecCCchhhhcChHHHHHhhccccccccEEechhhHHHHHhhccc----cccc
Q 020812 137 -------HSALRWFPAYG--IRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYY----LVDT 203 (321)
Q Consensus 137 -------~~l~~~l~~~~--~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~----~~~~ 203 (321)
..+.+.|++.+ +++|++|++||.|.||++|+..+ ++++||+++.+.+.+...... ....
T Consensus 66 ~~~~~~~~~l~~~l~~~g~~~~~i~~VilTH~H~DH~gg~~~~--------~~a~v~~~~~~~~~~~~~~~~~~~~~~~~ 137 (274)
T 3aj3_A 66 KPIQEKHQTIPGALGLLGLEPRDIDVVVNSHFHFDHCGGNKYF--------PHAKKICHRSEVPQACNPQPFEHLGYSDL 137 (274)
T ss_dssp CCBCCGGGSHHHHHHHTTCCGGGCCEEECSCCSGGGTTTGGGC--------TTSEEEEETTHHHHHHSCCGGGTTTTCCC
T ss_pred CcccCccccHHHHHHHcCCCHHHCCEEEecCcCcccCCchhhC--------CCCEEEECHHHHHHHhCcCCccccccChh
Confidence 23455555555 46899999999999999999865 368999999988877643211 0000
Q ss_pred cC-------------CCCCCCccceeeEEeCCceEEECC-EEEEEEEeccCCCceEEEEEEc-----cEEEeCCCCCCC
Q 020812 204 SG-------------IIPGAAVSELQFNIIDEEPFTVQD-LKITPLPVWHGAGYRSLGFRFG-----NICYISDVSEIP 263 (321)
Q Consensus 204 ~~-------------~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~p~~H~~g~~s~g~~i~-----~i~ysGDt~~~~ 263 (321)
.. ...+......++..+++ .+++++ +++..+|+ |++|+ ++|.++ +++|+||+.+..
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~~~v~~~pG-Ht~g~--~~~~~~~~~~~~~lf~GD~~~~~ 212 (274)
T 3aj3_A 138 SFSAEAAEARGATAQLLEGTTRANSTFEGIDG-DVDLARGVKLISTPG-HSIGH--YSLLVEFPRRKPILFTIDAAYTQ 212 (274)
T ss_dssp TTCHHHHHHHTCGGGCCTTCCSTTSCEEEECS-SEEEETTEEEEECTT-SSTTC--EEEEECCSSSCCEEEEETTCSSH
T ss_pred hhccccccccccccccccccccCCCCceEcCC-ccccCCEEEEEECCC-CCcee--eEEEEECCCCCEEEEEechhhhH
Confidence 00 00000011224455553 466777 88888886 99965 777773 899999987753
No 24
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A
Probab=99.74 E-value=5.4e-18 Score=150.18 Aligned_cols=164 Identities=19% Similarity=0.280 Sum_probs=111.3
Q ss_pred CceEEEEEcccCCCCcccccccCCCCCCCcccccccCCCCCCcccccEEEEEecCCCCCceEEEecCCCc----------
Q 020812 66 QQSEIVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGNKNRRLNTSILIRYPGPSGRRNILIDAGKFF---------- 135 (321)
Q Consensus 66 ~~~~i~~LGtG~s~g~P~~~~~~~~~~~c~~c~~~~~~~~~~~r~~ss~lI~~~~~~~~~~iLID~G~~~---------- 135 (321)
..|||++|++|... .+. .++.....++.......+|+||+ ++++.||||||.+.
T Consensus 6 ~~~~~~~l~~g~~~-~~~-----------~~~~~~~~~~~~~~~~~~~~lI~----~~~~~iLiDtG~~~~~~~~~~~~~ 69 (254)
T 3dha_A 6 TVKKLYFIPAGRCM-LDH-----------SSVNSALTPGKLLNLPVWCYLLE----TEEGPILVDTGMPESAVNNEGLFN 69 (254)
T ss_dssp CBSEEEEEEEEEEE-EEG-----------GGTSTTSCSCCEEEEEEEEEEEE----ETTEEEEECCCCCGGGBTCTTTTT
T ss_pred CceEEEEecCccEE-ech-----------hhccCCCCCCceEEEeeEEEEEE----CCCccEEEECCCChhhhccccccc
Confidence 45899999999742 221 22233322233334467899999 47889999999762
Q ss_pred --------------hHHHHhhcccCC--CCCccEEEecCCchhhhcChHHHHHhhccccccccEEechhhHHHHHhhccc
Q 020812 136 --------------YHSALRWFPAYG--IRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYY 199 (321)
Q Consensus 136 --------------~~~l~~~l~~~~--~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 199 (321)
...+.+.+++.+ +.+|++|++||.|.||++|+..+ ++++||+++.+.+.+.....+
T Consensus 70 ~~~~~~~~~p~~~~~~~l~~~l~~~g~~~~~I~~VilTH~H~DH~gg~~~~--------~~~~i~~~~~~~~~~~~~~~~ 141 (254)
T 3dha_A 70 GTFVEGQILPKMTEEDRIVNILKRVGYEPDDLLYIISSHLHFDHAGGNGAF--------TNTPIIVQRTEYEAALHREEY 141 (254)
T ss_dssp TSTTTTTEEEEBCGGGSHHHHHHHHTCCGGGCSEEECSCCSHHHHTTGGGC--------SSSCEEEEHHHHHHHHHCTTS
T ss_pred ccccccccccccCchhhHHHHHHHcCCCHHHCCEEEcCCChhhcCCChHHC--------CCCEEEECHHHHHHhhccccc
Confidence 123445555554 45699999999999999999865 268999999998887653222
Q ss_pred cccccCCCCCCCccceeeEEeCCceEEECCEEEEEEEeccCCCceEEEEEEc-----cEEEeCCCCCCC
Q 020812 200 LVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAGYRSLGFRFG-----NICYISDVSEIP 263 (321)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~H~~g~~s~g~~i~-----~i~ysGDt~~~~ 263 (321)
... ...+..++..++++....+++++..+|+ |++|+ ++|.+. +++|+||+.+..
T Consensus 142 ~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~pG-Ht~g~--~~~~~~~~~~~~vl~~GD~~~~~ 200 (254)
T 3dha_A 142 MKE-------CILPHLNYKIIEGDYEVVPGVQLLYTPG-HSPGH--QSLFIETEQSGSVLLTIDASYTK 200 (254)
T ss_dssp CGG-------GSCTTSCEEEECSSEEEETTEEEEECCS-SSTTC--EEEEEEETTTEEEEEEETTCSSH
T ss_pred ccc-------ccCcccceEEecCCccccCCEEEEECCC-CCCCC--EEEEEEeCCCCEEEEEecccchh
Confidence 110 0112234556666677788999988886 99965 666663 699999998753
No 25
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}
Probab=99.74 E-value=2.1e-18 Score=154.58 Aligned_cols=218 Identities=12% Similarity=0.142 Sum_probs=127.9
Q ss_pred EEEEEcccCCCCcccccccCCCCCCCcccccccCCCCCCcccccEEEEEecCCCCCceEEEecCCCch------------
Q 020812 69 EIVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGNKNRRLNTSILIRYPGPSGRRNILIDAGKFFY------------ 136 (321)
Q Consensus 69 ~i~~LGtG~s~g~P~~~~~~~~~~~c~~c~~~~~~~~~~~r~~ss~lI~~~~~~~~~~iLID~G~~~~------------ 136 (321)
+|+.|.+|... .|....+++. .+..|..............+|++|+ +++..+|||||.+..
T Consensus 4 ~v~~l~~G~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~li~----~~~~~iLiD~G~~~~~~~~~~~~~~~~ 76 (276)
T 2r2d_A 4 KLFVLDLGEIR-VDENFIIANS--TFVTPQKPTVSSRLIDIPVSAYLIQ----CTDATVLYDTGCHPECMGTNGRWPAQS 76 (276)
T ss_dssp EEEEEEEEEEE-EEHHHHSTTS--SCCCSSSTTCCCCEEEEEEEEEEEE----CSSCEEEECCCSCTTCSSTTCSSCHHH
T ss_pred eEEEEeceEEE-eCHHHeecCC--CccccccccCCCceEEeeeEEEEEE----CCCCCEEEECCCCcccccccccccHhH
Confidence 89999999764 3322112222 2333433322222223356899999 577899999998642
Q ss_pred -----------HHHHhhcccCC--CCCccEEEecCCchhhhcChHHHHHhhccccccccEEechhhHHHHHhhccccccc
Q 020812 137 -----------HSALRWFPAYG--IRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDT 203 (321)
Q Consensus 137 -----------~~l~~~l~~~~--~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~ 203 (321)
..+.+.|++.+ +.+|++|++||.|.||++|+..+ ++++||+++.+.+.+..........
T Consensus 77 ~~~~~~~~~~~~~l~~~l~~~g~~~~~i~~VilTH~H~DH~gg~~~~--------~~~~v~~~~~~~~~~~~~~~~~~~~ 148 (276)
T 2r2d_A 77 QLNAPYIGASECNLPERLRQLGLSPDDISTVVLSHLHNDHAGCVEYF--------GKSRLIAHEDEFATAVRYFATGDHS 148 (276)
T ss_dssp HHHSCBCCCTTCSHHHHHHHTTCCGGGCSEEECSCCSTTTSTTGGGC--------SSSEEEEEHHHHHHHHHHHHTTCCS
T ss_pred HhhcCCCCChhhCHHHHHHHcCCCHHHCCEEEecCcccccCCChhhC--------CCCEEEECHHHHHHHhccccccccc
Confidence 22344445554 46899999999999999999865 3689999998887765432110000
Q ss_pred cCCCCCCC-----ccceeeEEeC--CceEEEC-CEEEEEE-EeccCCCceEEEEEE-----ccEEEeCCCCCCCcchhhh
Q 020812 204 SGIIPGAA-----VSELQFNIID--EEPFTVQ-DLKITPL-PVWHGAGYRSLGFRF-----GNICYISDVSEIPEETYPF 269 (321)
Q Consensus 204 ~~~~~~~~-----~~~~~~~~~~--~~~~~~~-~~~v~~~-p~~H~~g~~s~g~~i-----~~i~ysGDt~~~~~~~~~~ 269 (321)
.. +.... ....++..++ ++.++++ ++++..+ | .|++| +++|.+ ++++|+||+.+.++.+...
T Consensus 149 ~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~v~~~~p-gHt~g--~~~~~~~~~~~~~vl~~GD~~~~~~~~~~~ 224 (276)
T 2r2d_A 149 SP-YIVKDIEAWLATPRNWDLVGRDERERELAPGVNLLNFGT-GHASG--MLGLAVRLEKQPGFLLVSDACYTATNYGPP 224 (276)
T ss_dssp SS-SCHHHHHHHTTSCCCEEEECTTCCEEEEETTEEEEEEES-SSSSS--EEEEEEECSSSCEEEEEETTSCCHHHHSSS
T ss_pred cc-cchHHhhhhccccccceeccCCCceeEecCCEEEEeCCC-CCCce--eEEEEEEcCCCceEEEEechhhhHHHhccc
Confidence 00 00000 0122455565 4677775 8999999 8 59995 577877 3799999998763322110
Q ss_pred cCCCCEEEEcccCCCCCCCCCCCHHHHHHHHHHhCCeEEEEec
Q 020812 270 LQDCEILIMDALRPDRSSSTHFGLPRVDKFLAYSGNQFTLSNM 312 (321)
Q Consensus 270 ~~~~dlli~ea~~~~~~~~~H~~~~~a~~~~~~~~~~~vltH~ 312 (321)
....++ ..+ ....+.+++.+.++..+....+++.|.
T Consensus 225 ~~~~~~------~~d-~~~~~~sl~~l~~l~~~~~~~v~~~H~ 260 (276)
T 2r2d_A 225 ARRAGV------LHD-TIGYDRTVSHIRQYAESRSLTVLFGHD 260 (276)
T ss_dssp CCCCSS------CSC-HHHHHHHHHHHHHHHHHTTCEEEESSC
T ss_pred CCCCcc------ccC-HHHHHHHHHHHHHHHhcCCCEEEeCCC
Confidence 111110 011 112344455554444444458888884
No 26
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis}
Probab=99.70 E-value=5.1e-17 Score=146.78 Aligned_cols=189 Identities=17% Similarity=0.200 Sum_probs=122.2
Q ss_pred cccEEEEEecCCCCCceEEEecCCCchHHHHhhccc--CCCCCccEEEecCCchhhhcChHHHHHhhccccccccEEech
Q 020812 110 LNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPA--YGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAM 187 (321)
Q Consensus 110 ~~ss~lI~~~~~~~~~~iLID~G~~~~~~l~~~l~~--~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~ 187 (321)
..+|++|+. +++.+|||+|.+.. +.+.+++ ..+.+|++|++||.|+||++|+..+.+. .++++||+++
T Consensus 32 ~g~s~li~~----~~~~iLiD~G~~~~--~~~~l~~~g~~~~~i~~v~lTH~H~DH~ggl~~~~~~----~~~~~v~~~~ 101 (284)
T 2p4z_A 32 HGLSLLLKK----GNKEIVVDTGQSEN--FIKNCGLMGIDVGRIKKVVLTHGHYDHIGGLKGLLER----NPEVKIYTHK 101 (284)
T ss_dssp SSCEEEEEE----TTEEEEECCCSSTH--HHHHHHHTTCCGGGCCEEECCCSCHHHHTTHHHHHHH----CTTCEEEEEG
T ss_pred CEEEEEEEE----CCeEEEEeCCCCHH--HHHHHHHcCCChhhCCEEEECCCCchhhccHHHHHHH----cCCCceecCH
Confidence 456899994 77899999999753 2222333 4456899999999999999999988753 3578999998
Q ss_pred hhHHHHHhhccccccccCCCCC--CCc---cceeeEEeCCceEEEC-C-EEEEEEEeccCCCc-eEEEEEEccEEEeCCC
Q 020812 188 RDFEVMKKTHYYLVDTSGIIPG--AAV---SELQFNIIDEEPFTVQ-D-LKITPLPVWHGAGY-RSLGFRFGNICYISDV 259 (321)
Q Consensus 188 ~~~~~l~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~-~-~~v~~~p~~H~~g~-~s~g~~i~~i~ysGDt 259 (321)
.+.+ ..+.........+.+ ... ...++..+++ ..+++ + +.+.++|..|.... ...+|+++.+.|++|+
T Consensus 102 ~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~i~~gi~~i~~~~~~h~~~~~~g~~~~~~~~~y~~D~ 177 (284)
T 2p4z_A 102 EILN---KKYAMRKGGQFEEIGFDLSFYEKYKNNFVLIDK-DAEIEEGFYVITNTDITYDNEFTTKNFFVEKEGKRIPDK 177 (284)
T ss_dssp GGGS---CEEEECSSSCEEECSCCHHHHHHHGGGEEEESS-CEEEETTEEEECSCCCCSCCHHHHTTEEEEETTEEEECC
T ss_pred HHHH---HHhccCccccccccccccchhhhcCceEEEeCC-CeEEeCCEEEEeeeCCccccccCCCceEEEcCCCEecCC
Confidence 8754 111110000000011 000 0124445543 34553 4 55556777665410 0114888888999995
Q ss_pred CCCCcchhhhcCCCC--EEEEcccC--------------CCCC-----CCCCC------CHHHHHHHHHHhCC-eEEEEe
Q 020812 260 SEIPEETYPFLQDCE--ILIMDALR--------------PDRS-----SSTHF------GLPRVDKFLAYSGN-QFTLSN 311 (321)
Q Consensus 260 ~~~~~~~~~~~~~~d--lli~ea~~--------------~~~~-----~~~H~------~~~~a~~~~~~~~~-~~vltH 311 (321)
.+++...+++++| +++.+|.. .... .+.|+ ++++++++++++++ +++++|
T Consensus 178 --~~de~~~~~~~~dglvli~gcsH~Gi~n~l~~~~~~~~~~~i~~~igg~Hl~~~~~~~~~~a~~~~~~~~~~~l~l~H 255 (284)
T 2p4z_A 178 --FLDEVFVVVKEEDGINVVTGCSHAGILNILETARNRFGVSYIKSLIGGFHLRGMEEEKVKDIARKIEEYGVKKVLTGH 255 (284)
T ss_dssp --CTTCCEEEEEETTEEEEEESSCTTCHHHHHHHHHHHHTCSCBSEEEECCCCTTCCHHHHHHHHHHHHHTTBCCEEECG
T ss_pred --CCCceEEEEEcCCcEEEEECCCCcCHHHHHHHHHHHcCCCceEEEEEcccCCCCCHHHHHHHHHHHHcCCCCEEEeeC
Confidence 4566677788899 66777652 1111 36799 89999999999997 899999
Q ss_pred ccC
Q 020812 312 MSL 314 (321)
Q Consensus 312 ~~~ 314 (321)
++.
T Consensus 256 ~~~ 258 (284)
T 2p4z_A 256 CTG 258 (284)
T ss_dssp GGC
T ss_pred cCc
Confidence 875
No 27
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=99.70 E-value=1.7e-16 Score=148.19 Aligned_cols=141 Identities=20% Similarity=0.219 Sum_probs=105.7
Q ss_pred CCceEEEecCCCchHHHHhhcccCCCCCccEEEecCCchhhhcChHHHHHhhccccccccEEechhhHHHHHhhcccccc
Q 020812 123 GRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVD 202 (321)
Q Consensus 123 ~~~~iLID~G~~~~~~l~~~l~~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~ 202 (321)
++..++||+... .++.+|++|||||.|.||++|++. ..+++||+++.+.+.+...+..
T Consensus 35 pG~~ilVD~f~~-----------~~~~~IdaI~lTH~H~DHiggl~~--------~~~~pIy~s~~t~~ll~~~l~~--- 92 (367)
T 4b87_A 35 PGTGFTVDAFQY-----------GVVEGCTAYFLTHFHSDHYAGLSK--------HFTFPVYCSEITGNLLKNKLHV--- 92 (367)
T ss_dssp TTSSEEESCCSS-----------SSCTTCCEEECCCCCHHHHTTCST--------TCCSCEEECHHHHHHHHHHSCC---
T ss_pred CCCeEEEeCCCc-----------CCccCCcEEEECcChHHHhCCccc--------ccCCcEEECHHHHHHHHHHhcc---
Confidence 567899997421 245789999999999999999983 2268999999998887764321
Q ss_pred ccCCCCCCCccceeeEEeC-CceEEECCEEEEEEEeccCCCceEEEEEEc-----cEEEeCCCCCCCcchhhhc--CCCC
Q 020812 203 TSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPVWHGAGYRSLGFRFG-----NICYISDVSEIPEETYPFL--QDCE 274 (321)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~p~~H~~g~~s~g~~i~-----~i~ysGDt~~~~~~~~~~~--~~~d 274 (321)
....+..++ ++.+.+++++|+++++.|++| +++|.++ +++|+||+...++.....+ +++|
T Consensus 93 ----------~~~~~~~l~~g~~~~ig~~~v~~~~agH~~g--s~~~~i~~~~g~~il~tGD~~~~~~~~~~~l~~~~~D 160 (367)
T 4b87_A 93 ----------QEQYIHPLPLDTECIVNGVKVVLLDANHCPG--AVMILFYLPNGTVILHTGDFRADPSMERSLLADQKVH 160 (367)
T ss_dssp ----------CGGGEEECCBTSCEEETTEEEEEEECSSSTT--CEEEEEECTTSCEEEECCSCCCCGGGGGSGGGTSCCC
T ss_pred ----------ccceEEEeCCCCEEEECCEEEEEEeCCCcCC--cEEEEEEcCCCcEEEEecCcccCcccchhhhccCCCC
Confidence 011344454 578999999999999999985 5888873 4999999998755433333 4799
Q ss_pred EEEEcccCCCCCCCCCCCHHHHHH
Q 020812 275 ILIMDALRPDRSSSTHFGLPRVDK 298 (321)
Q Consensus 275 lli~ea~~~~~~~~~H~~~~~a~~ 298 (321)
+|++|+|+.+.. ..|.+.+++.+
T Consensus 161 ~Li~EsTy~~~~-~~~ps~~~~~~ 183 (367)
T 4b87_A 161 MLYLDTTYCSPE-YTFPSQQEVIR 183 (367)
T ss_dssp EEEECCTTCSTT-CCCCCHHHHHH
T ss_pred EEEEecccCCCC-CCCCCHHHHHH
Confidence 999999998633 45777776655
No 28
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}
Probab=99.69 E-value=4.9e-18 Score=152.88 Aligned_cols=185 Identities=17% Similarity=0.183 Sum_probs=111.7
Q ss_pred CCCceEEEEEcccCCCCcccccccCCCCCCCcccccccCC--CCCCcccccEEEEEecCCCCCceEEEecCCCch-----
Q 020812 64 PAQQSEIVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEP--GNKNRRLNTSILIRYPGPSGRRNILIDAGKFFY----- 136 (321)
Q Consensus 64 ~~~~~~i~~LGtG~s~g~P~~~~~~~~~~~c~~c~~~~~~--~~~~~r~~ss~lI~~~~~~~~~~iLID~G~~~~----- 136 (321)
+.|+|+|+.|.+|... +|....+...+ + ..+.+...+ ...-.-..+|++|+ .+++.+|||||.+..
T Consensus 2 ~~g~~~v~~l~~g~~~-~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~n~~lI~----~~~~~iLID~G~~~~~~~~~ 74 (280)
T 3esh_A 2 KIGDISIHYLNGGNTK-MDGGAMFGVVP-K-PLWSKQYNANERNQINLPTHPILIQ----TAQYNLIIDAGIGNGKLSEK 74 (280)
T ss_dssp EETTEEEEECCCCEEE-EEHHHHHTTSC-H-HHHTTTSCBCTTSEEEEECCCEEEE----CSSCEEESCCTTCSSCSCHH
T ss_pred cccCEEEEEEeCCccc-cCcccccCCCC-H-HHHhhcccCCcCCeEEEeEEEEEEE----ECCEEEEEECCCCCcccccc
Confidence 4689999999998742 22211222111 1 111111111 11122356899999 578999999997641
Q ss_pred ----------HHHHhhcccCC--CCCccEEEecCCchhhhcChHHHHHhhccccccccEEechhhHHHHHhhcccccccc
Q 020812 137 ----------HSALRWFPAYG--IRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTS 204 (321)
Q Consensus 137 ----------~~l~~~l~~~~--~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~ 204 (321)
..+.+.+++.+ +.+|++|++||.|.||++|+..+.+. ...++++||+++.+.+.+......... .
T Consensus 75 ~~~~~~~~~~~~l~~~l~~~g~~~~~Id~IllTH~H~DHigg~~~l~~~--~~fp~a~i~~~~~~~~~~~~~~~~~~~-~ 151 (280)
T 3esh_A 75 QLRNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTDQAGH--AIFENAIHVVQQDEWHEFIAPNIRSKS-T 151 (280)
T ss_dssp HHHHTTCSSCCCHHHHHHTTTCCTTSCCEEECSCCCHHHHGGGSCTTSC--CSSTTCEEEEEHHHHHHHHSCCTTGGG-T
T ss_pred cccccCCcccchHHHHHHHcCCCHHHCCEEEeCCCcccccCcccccccc--cCCCCCEEEECHHHHHHhhCccccccc-c
Confidence 23555555555 46899999999999999999887641 124689999999988877643211000 0
Q ss_pred CCCCC-CCccceeeEEeCCceEEECCEEEEEEEeccCCCceEEEEEEc----cEEEeCCCCCC
Q 020812 205 GIIPG-AAVSELQFNIIDEEPFTVQDLKITPLPVWHGAGYRSLGFRFG----NICYISDVSEI 262 (321)
Q Consensus 205 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~p~~H~~g~~s~g~~i~----~i~ysGDt~~~ 262 (321)
.... ......++..+++.....+++++...|+ |++|+ ++|.++ +++|+||+.+.
T Consensus 152 -~~~~~~~~~~~~~~~~~~~~~l~~gi~~~~~pG-Ht~g~--~~~~i~~~~~~vlftGD~~~~ 210 (280)
T 3esh_A 152 -YWDKNKGDYSNKLILFEKHFEPVPGIKMQHSGG-HSFGH--TIITIESQGDKAVHMGDIFPT 210 (280)
T ss_dssp -SCGGGCCGGGGGEEEESSEECSSTTEEEEECCS-SSTTC--EEEEEEETTEEEEECGGGSCS
T ss_pred -hhhhhhhhhhheEEEeCCCCeEcCCEEEEEcCC-CCccc--EEEEEEECCcEEEEEEccCCc
Confidence 0000 0001113444443221124688877776 99975 777773 79999999765
No 29
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A
Probab=99.68 E-value=1.9e-16 Score=136.07 Aligned_cols=131 Identities=19% Similarity=0.292 Sum_probs=90.2
Q ss_pred ccEEEEEecCCCCCceEEEecCCCchHHHHhhcccCCCCCccEEEecCCchhhhcChHHHHHhhccccccccEEechhhH
Q 020812 111 NTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDF 190 (321)
Q Consensus 111 ~ss~lI~~~~~~~~~~iLID~G~~~~~~l~~~l~~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~~~ 190 (321)
.+|++|+. +++.+|||+|.+. ..+.+.+++.+. +|++|++||.|.||++|+..+.+.. +++||+++.+.
T Consensus 13 ~n~~li~~----~~~~iliD~G~~~-~~l~~~l~~~g~-~i~~vilTH~H~DH~gg~~~l~~~~-----~~~v~~~~~~~ 81 (207)
T 2zwr_A 13 ENAYLVET----GEGPVLIDPGDEP-EKLLALFQTTGL-IPLAILLTHAHFDHVGAVAPLVEAL-----DLPVYLHPLDL 81 (207)
T ss_dssp EEEEEEEE----TTEEEEECCCSCH-HHHHHHHHHHTC-CCSCEECSCCCGGGTTTHHHHHHHH-----CCCEEECGGGH
T ss_pred cEEEEEEe----CCcEEEEeCCCCH-HHHHHHHHHcCC-cccEEEECCCChHHHccHHHHHHHh-----CCcEEECHHHH
Confidence 46999994 6789999999754 455566666665 5999999999999999999887643 58999999998
Q ss_pred HHHHhhcccc--ccccCCCCCCCccceeeEEeC-CceEEECCEEEEEEEeccCCCceEEEEEEc--cEEEeCCCCCC
Q 020812 191 EVMKKTHYYL--VDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPVWHGAGYRSLGFRFG--NICYISDVSEI 262 (321)
Q Consensus 191 ~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~p~~H~~g~~s~g~~i~--~i~ysGDt~~~ 262 (321)
+.+....... +.. +-..... ....++ ++.+. ++++..+|+ |++| +++|.++ +++|+||+.+.
T Consensus 82 ~~~~~~~~~~~~~g~----~~~~~~~-~~~~~~~g~~i~--~~~~~~~pG-Ht~g--~~~~~~~~~~~lf~GD~~~~ 148 (207)
T 2zwr_A 82 PLYEGADLAARAWGL----AIPKPPL-PVRPLEEGMRLF--GFQVLHLPG-HSPG--HVAFYDPEGAQVFSGDLLFR 148 (207)
T ss_dssp HHHHTHHHHHHHTTC----CCCCCCS-CCEECCTTCEET--TEEEEECCS-SSTT--CEEEEETTTTEEEEETSEET
T ss_pred HHHhCchhhhhhcCC----CCCcCCC-CceEeCCCCEEE--EEEEEeCCC-CCCC--cEEEEECCCCEEEEecccCC
Confidence 8776432110 000 0000000 122333 44443 788887887 9996 4788884 99999999653
No 30
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}
Probab=99.67 E-value=5.5e-16 Score=137.57 Aligned_cols=177 Identities=14% Similarity=0.133 Sum_probs=109.7
Q ss_pred ccccEEEEEecCCCCCceEEEecCCCchHHHHhhcccCCCCCccEEEecCCchhhhcChHHHHHhhccccccccEEechh
Q 020812 109 RLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMR 188 (321)
Q Consensus 109 r~~ss~lI~~~~~~~~~~iLID~G~~~~~~l~~~l~~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~ 188 (321)
+..+|++|+ +++..+|||+|.+... +.+ +. +.+|++|++||.|.||++|+..+.+.+ +++||+++.
T Consensus 18 ~~~~~~li~----~~~~~iLiD~G~~~~~---~~l-~~-~~~i~~vi~TH~H~DH~gg~~~l~~~~-----~~~i~~~~~ 83 (261)
T 3adr_A 18 EIATVYVMC----GEKLTVMIDAGVSNSI---ADF-SF-LDKLDYIVLTHLHIDHIGLLPELLQVY-----KAKVLVKSG 83 (261)
T ss_dssp GGSEEEEEE----CSSCEEEECCCCTTCC---CCC-TT-CSCCCEEECSCCSGGGTTTHHHHHHHS-----CCEEEEETT
T ss_pred CceEEEEEE----cCCcEEEEeCCCCCCh---hhc-CC-CCCCcEEEECCCCccccCCHHHHHHHh-----CCeEEECHH
Confidence 456799998 4678999999987421 112 34 678999999999999999999887642 588999988
Q ss_pred hHHHHHhhc---------cccccc-cCCCCC--CCccceeeEEeC-CceEEECCEEEEEEEec-cCCCceEEEEEEccEE
Q 020812 189 DFEVMKKTH---------YYLVDT-SGIIPG--AAVSELQFNIID-EEPFTVQDLKITPLPVW-HGAGYRSLGFRFGNIC 254 (321)
Q Consensus 189 ~~~~l~~~~---------~~~~~~-~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~v~~~p~~-H~~g~~s~g~~i~~i~ 254 (321)
+.+.+.... ...+.. ...+.. ...+..++..++ ++.+.+++.+++.+++. |++| +++|.+++++
T Consensus 84 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~pGHt~~--~~~~~~~~~l 161 (261)
T 3adr_A 84 FKKYLTSEDGLKKLNESAEKVLGDLYYVYGGLEKKLDQDKVIEVEGNEEFDLGGYRMRLIYTPGHARH--HMSVLVDDFL 161 (261)
T ss_dssp CTHHHHSHHHHHHHHHHHHHHHTHHHHHHCCCCSCCCGGGEEEECSCCEEECSSSEEEEEECTTSCTT--CEEEEETTEE
T ss_pred HHHHhcCchhHHHHHHHHHHHHHHHHHHhcccccCCCccceEecCCCCEEEECCEEEEEEECCCCCCc--cEEEEECCEE
Confidence 766554211 000000 000000 011112344454 67888999888887765 9985 5788888999
Q ss_pred EeCCCCCCCcchhhhcCCCCEEEEcccCCCCCCCCCCCHHHHHHHHHHhCC-eEEEEecc
Q 020812 255 YISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRVDKFLAYSGN-QFTLSNMS 313 (321)
Q Consensus 255 ysGDt~~~~~~~~~~~~~~dlli~ea~~~~~~~~~H~~~~~a~~~~~~~~~-~~vltH~~ 313 (321)
|+||+.... . ...+..+. .. ...+....++++.+.++++ .+++.|..
T Consensus 162 f~GD~~~~~--~------~~~~~~~~-~~---~~~~~~~~~sl~~l~~l~~~~v~~~H~~ 209 (261)
T 3adr_A 162 FTGDSAGAY--F------NGVVIPTT-PP---VIDYKMYMESLKRQIELKPKVVGFAHGG 209 (261)
T ss_dssp EEETSSCEE--E------TTEEECCC-CS---CCCHHHHHHHHHHHHHTCCSEEEETTTE
T ss_pred EEcCccccc--c------cccccCCC-CC---CCCHHHHHHHHHHHHcCCCCEEEeCCCC
Confidence 999996531 1 11222111 11 1222334455666666776 77777754
No 31
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5
Probab=99.67 E-value=1.6e-17 Score=153.38 Aligned_cols=185 Identities=17% Similarity=0.193 Sum_probs=111.0
Q ss_pred CccCCCCCceEEEEEcccCCCCcccccccCCCCCCCcccccc-------cC-CCCCCcccccEEEEEecCCCCCceEEEe
Q 020812 59 NGVQLPAQQSEIVFMGTGTSEGIPRVSCLTNPSKKCPVCTKA-------VE-PGNKNRRLNTSILIRYPGPSGRRNILID 130 (321)
Q Consensus 59 ~~~~~~~~~~~i~~LGtG~s~g~P~~~~~~~~~~~c~~c~~~-------~~-~~~~~~r~~ss~lI~~~~~~~~~~iLID 130 (321)
+.++.+.|+|+|++|.+|... +|.. .|+.|.+. .+ +........+|++|+ ++++.||||
T Consensus 46 ~~~~~~~g~~~vt~l~~g~~~-~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~LI~----~~~~~iLID 112 (331)
T 1p9e_A 46 GYYRMLLGDFEITALSDGTVA-LPVD--------KRLNQPAPKTQSALAKSFQKAPLETSVTGYLVN----TGSKLVLVD 112 (331)
T ss_dssp SEEEEEETTEEEEEEEEEEEE-ECHH--------HHBSSCHHHHHHHHHHTTCCSSEEEEEEEEEEE----CSSCEEEEC
T ss_pred CceEEEECCEEEEEEeCCCEe-CCHH--------HcCCCCHHHHHHhhhhccCCCceEEEEEEEEEE----ECCEEEEEE
Confidence 345578899999999999864 5521 22233220 00 111222346799999 578899999
Q ss_pred cCCCc-----hHHHHhhcccCC--CCCccEEEecCCchhhhcChHHHHHhhccccccccEEechhhHHHHHhhcccc-cc
Q 020812 131 AGKFF-----YHSALRWFPAYG--IRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYL-VD 202 (321)
Q Consensus 131 ~G~~~-----~~~l~~~l~~~~--~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~-~~ 202 (321)
+|.+. ...+.+.|++.+ +++|++|++||.|.||++|+..+. ...+++++||+++.+.+.+....... ..
T Consensus 113 tG~~~~~~~~~~~l~~~L~~~Gi~~~~Id~VilTH~H~DHiggl~~~~---~~~fp~a~v~~~~~~~~~~~~~~~~~~~~ 189 (331)
T 1p9e_A 113 TGAAGLFGPTLGRLAANLKAAGYQPEQVDEIYITHMHPDHVGGLMVGE---QLAFPNAVVRADQKEADFWLSQTNLDKAP 189 (331)
T ss_dssp CCCTTSSCTTCCCHHHHHHHTTCCGGGCCEEECSCCCHHHHGGGEETT---EESSTTCEEECBHHHHHHHSCHHHHTTCS
T ss_pred CCCCCcCCcchhHHHHHHHHcCCCHHHCCEEEeCCcccccCCcccccc---cccCCCCEEEECHHHHHHHhCchhhccCc
Confidence 99872 223444455555 468999999999999999997432 11246799999999887664321000 00
Q ss_pred c--c-CCCCC--CCc-c---ceeeEEeCC-ceEEECCEEEEEEEeccCCCceEEEEEEc----cEEEeCCCCCCC
Q 020812 203 T--S-GIIPG--AAV-S---ELQFNIIDE-EPFTVQDLKITPLPVWHGAGYRSLGFRFG----NICYISDVSEIP 263 (321)
Q Consensus 203 ~--~-~~~~~--~~~-~---~~~~~~~~~-~~~~~~~~~v~~~p~~H~~g~~s~g~~i~----~i~ysGDt~~~~ 263 (321)
. . ..+.. ... + ..++..+++ +.+. .++++..+|+ |++|+ ++|.++ +++|+||+.+.+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~-~gi~vi~tpG-HtpG~--~~~~i~~~~~~vlf~GD~~~~~ 260 (331)
T 1p9e_A 190 DDESKGFFKGAMASLNPYVKAGKFKPFSGNTDLV-PGIKALASHG-HTPGH--TTYVVESQGQKLALLGDLILVA 260 (331)
T ss_dssp STTSCHHHHHHHHHHHHHHHTTCBCCBCSSEECS-TTEEEEECTT-SSTTC--EEEEEEETTEEEEECTTSCCCH
T ss_pred hhhhhHHHHHHHHHhhhhcccCceEEeCCCCEEc-ccEEEEEcCC-CChhC--EEEEEEECCcEEEEEECccCcc
Confidence 0 0 00000 000 0 012233442 2222 3678777775 99975 677773 899999998753
No 32
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}
Probab=99.64 E-value=2e-15 Score=129.70 Aligned_cols=139 Identities=18% Similarity=0.163 Sum_probs=92.6
Q ss_pred ccEEEEEecCCCCCceEEEecCCCchHHHHhhcccCCCCCccEEEecCCchhhhcChHHHHHhhccccccccEEechhhH
Q 020812 111 NTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDF 190 (321)
Q Consensus 111 ~ss~lI~~~~~~~~~~iLID~G~~~~~~l~~~l~~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~~~ 190 (321)
.+|++|+.. .+++.+|||+|... ..+.+.+++.+. +|++|++||.|.||++|+..+.+.. +++||+++.+.
T Consensus 13 ~n~~li~~~--~~~~~iLiD~G~~~-~~l~~~l~~~g~-~i~~ii~TH~H~DH~gg~~~l~~~~-----~~~v~~~~~~~ 83 (210)
T 2xf4_A 13 QNCSLIWCE--QTRLAALVDPGGDA-EKIKQEVDASGV-TLMQILLTHGHLDHVGAASELAQHY-----GVPVIGPEKED 83 (210)
T ss_dssp EEEEEEECT--TTCEEEEECCCSCH-HHHHHHHHHHTC-EEEEEECSCSCHHHHTTHHHHHHHH-----TCCEECCCGGG
T ss_pred cEEEEEEec--CCCcEEEEcCCCCH-HHHHHHHHHcCC-ceeEEEECCCChhhhcCHHHHHHHc-----CCcEEEecchH
Confidence 568999731 25679999999653 556666666665 5999999999999999999887643 58899998887
Q ss_pred HHHHhhccccccccCCCCCCCccceeeEEe-CCceEEECCEEEEEEEec-cCCCceEEEEEEc--cEEEeCCCCCC
Q 020812 191 EVMKKTHYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQDLKITPLPVW-HGAGYRSLGFRFG--NICYISDVSEI 262 (321)
Q Consensus 191 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~p~~-H~~g~~s~g~~i~--~i~ysGDt~~~ 262 (321)
+.+.+......... ..+.... ......+ +++.+.+++.+++.++.. |++| +++|.++ +++|+||+.+.
T Consensus 84 ~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~g~~~~~g~~~i~~~~~pgHt~g--~~~~~~~~~~~lf~GD~~~~ 155 (210)
T 2xf4_A 84 EFWLQGLPAQSRMF-GLDECQP-LTPDRWLNDGDRVSVGNVTLQVLHCPGHTPG--HVVFFDEQSQLLISGDVIFK 155 (210)
T ss_dssp HHHHHTHHHHHHHT-TCCCCCC-CCCSBCCCTTCEEEETTEEEEEEECCSSSTT--CEEEEETTTTEEEEETSEET
T ss_pred HHHhccchhhhhhc-CCcccCC-CCCceEECCCCEEEECCeEEEEEECCCCCCC--cEEEEeCCCCEEEECCEecc
Confidence 76654321110000 0000000 0011223 367889999888876543 8885 5788885 99999999653
No 33
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=99.63 E-value=2.7e-15 Score=147.42 Aligned_cols=177 Identities=15% Similarity=0.273 Sum_probs=109.8
Q ss_pred cEEEEEecCCCCCceEEEecCCCc------------------------hHHHHhhcccCCCCCccEEEecCCchhhhcCh
Q 020812 112 TSILIRYPGPSGRRNILIDAGKFF------------------------YHSALRWFPAYGIRTIDAVIITHSHADAIGGL 167 (321)
Q Consensus 112 ss~lI~~~~~~~~~~iLID~G~~~------------------------~~~l~~~l~~~~~~~Id~V~iTH~H~DH~~Gl 167 (321)
+|+||+. +++.+|||+|... ...+.+.|+..++.+||+||+||.|.||++|+
T Consensus 19 ~~~lI~~----~~~~iLID~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~~id~vilTH~H~DHiggl 94 (547)
T 2bib_A 19 DAIILES----NGHFAMVDTGEDYDFPDGSDSRYPWREGIETSYKHVLTDRVFRRLKELSVQKLDFILVTHTHSDHIGNV 94 (547)
T ss_dssp CEEEEEE----TTEEEEEECCCCSCCCCSSSTTSCCCTTCCCCGGGCCHHHHHHHHHHTTCCCBSCEECCCSCHHHHTTH
T ss_pred eEEEEEe----CCeEEEEeCCCCCcccccccccccccccccccccchhHHHHHHHHHhcCcccccEEEEcCCCccccCCH
Confidence 4899994 7789999999752 34566677778888899999999999999999
Q ss_pred HHHHHhhccccccccEEechhhHHHHHhhc---------cccccccCCCCCCCccceeeE--EeC-CceEEECCEEEEEE
Q 020812 168 DDLRDWTNNVQRHIPIYVAMRDFEVMKKTH---------YYLVDTSGIIPGAAVSELQFN--IID-EEPFTVQDLKITPL 235 (321)
Q Consensus 168 ~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~---------~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~v~~~ 235 (321)
..+++.. +..+||+++.....+.... ....... ...+ +.+. .+. ++.+.+++++|+.+
T Consensus 95 ~~l~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g-----~~~~~~~~~~g~~~~~g~~~i~~l 164 (547)
T 2bib_A 95 DELLSTY----PVDRVYLKKYSDSRITNSERLWDNLYGYDKVLQTA-TETG-----VSVIQNITQGDAHFQFGDMDIQLY 164 (547)
T ss_dssp HHHHHHS----CBSEEECCCCCGGGBSCGGGCTTHHHHHHHHHHHH-HHTT-----CEEECSCCTTTTEEEETTEEEEEE
T ss_pred HHHHHhC----CccEEEECcccccccCChHHHHhHHHHHHHHHHHH-HHhC-----CeEEEeecCCCceEecCCeeEEEe
Confidence 9998753 2346888765433211000 0000000 0000 1111 223 46789999999988
Q ss_pred Ee---ccCC---------CceEEEEEEc----cEEEeCCCCCCCcc---hhhhcCCCCEEEEcccCCCCCCC-CCCCHHH
Q 020812 236 PV---WHGA---------GYRSLGFRFG----NICYISDVSEIPEE---TYPFLQDCEILIMDALRPDRSSS-THFGLPR 295 (321)
Q Consensus 236 p~---~H~~---------g~~s~g~~i~----~i~ysGDt~~~~~~---~~~~~~~~dlli~ea~~~~~~~~-~H~~~~~ 295 (321)
+. .|.. +..+++++++ +++|+||+...++. +.+....+|+|++. .|. .+ ...
T Consensus 165 ~~~~~~h~~~~~~~~~~~n~~S~vl~i~~~~~~iLftGD~~~~~~~e~~l~~~~~~~DvLkv~------HHG~S~--~s~ 236 (547)
T 2bib_A 165 NYENETDSSGELKKIWDDNSNSLISVVKVNGKKIYLGGDLDNVHGAEDKYGPLIGKVDLMKFN------HHHDTN--KSN 236 (547)
T ss_dssp SCSCCBCTTSCBCCBSSGGGGCCEEEEEETTEEEEECTTCCSTTSHHHHHHHHHCCCSEEECT------TTTBCS--SSS
T ss_pred cCccccCccccccccCCCCCCcEEEEEEECCEEEEecCCccchhhhhhhhcccccceeEEEec------cccCcc--cCC
Confidence 63 3431 1358889885 89999999865331 11223579999752 111 11 123
Q ss_pred HHHHHHHhCCeEEEE
Q 020812 296 VDKFLAYSGNQFTLS 310 (321)
Q Consensus 296 a~~~~~~~~~~~vlt 310 (321)
..+++++++|+++++
T Consensus 237 s~~fl~~v~P~~aii 251 (547)
T 2bib_A 237 TKDFIKNLSPSLIVQ 251 (547)
T ss_dssp CHHHHHHHCCSEEEE
T ss_pred hHHHHHhcCCcEEEE
Confidence 456777888855554
No 34
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A
Probab=99.63 E-value=2.6e-15 Score=133.65 Aligned_cols=140 Identities=16% Similarity=0.114 Sum_probs=93.5
Q ss_pred ccEEEEEecCCCCCceEEEecCCC-chHHHHhhcccCCC--CCccEEEecCCchhhhcChHHHHHhhccccccccEEech
Q 020812 111 NTSILIRYPGPSGRRNILIDAGKF-FYHSALRWFPAYGI--RTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAM 187 (321)
Q Consensus 111 ~ss~lI~~~~~~~~~~iLID~G~~-~~~~l~~~l~~~~~--~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~ 187 (321)
.+|++|+. +++.+|||+|.+ ....+.+.+++.++ .+|++|++||.|.||++|+..+.+. .+++||+++
T Consensus 25 ~n~~li~~----~~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~IilTH~H~DH~gg~~~l~~~-----~~~~v~~~~ 95 (263)
T 1k07_A 25 LASYLIVT----PRGNILINSDLEANVPMIKASIKKLGFKFSDTKILLISHAHFDHAAGSELIKQQ-----TKAKYMVMD 95 (263)
T ss_dssp BCCEEEEE----TTEEEEECCCCGGGHHHHHHHHHHTTCCGGGEEEEECSSSSHHHHTTHHHHHHH-----HCCEEEEEH
T ss_pred eEEEEEEe----CCceEEEECCCcccHHHHHHHHHHcCCCHHHCcEEEeCCCCccccccHHHHHHh-----cCCEEEEcH
Confidence 46899994 678999999986 34556666666664 4799999999999999999988764 268999999
Q ss_pred hhHHHHHhhccccccccCCCCCCCccceeeEEe-CCceEEECCEEEEEEEec-cCCCceEEEEEEc--------cEEEeC
Q 020812 188 RDFEVMKKTHYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQDLKITPLPVW-HGAGYRSLGFRFG--------NICYIS 257 (321)
Q Consensus 188 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~p~~-H~~g~~s~g~~i~--------~i~ysG 257 (321)
.+.+.+..........................+ +++.+.+++.+++.++.. |++|+ ++|.++ +++|+|
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~i~~pGHt~g~--~~~~~~~~~~~~~~~~lf~G 173 (263)
T 1k07_A 96 EDVSVILSGGKSDFHYANDSSTYFTQSTVDKVLHDGERVELGGTVLTAHLTPGHTRGC--TTWTMKLKDHGKQYQAVIIG 173 (263)
T ss_dssp HHHHHHHTTTTTCTTTTTCGGGCCCCCCCSEEECTTCEEEETTEEEEEEECCSSSTTC--EEEEEEEEETTEEEEEEEEC
T ss_pred HHHHHHhcccccccccCccccccCCCCCcceEeCCCCEEEECCeEEEEEECCCCCCCc--EEEEEecccCCceeEEEEEC
Confidence 998887653211000000000000000122334 467889999777766543 99964 666654 499999
Q ss_pred CCCC
Q 020812 258 DVSE 261 (321)
Q Consensus 258 Dt~~ 261 (321)
|+..
T Consensus 174 D~~~ 177 (263)
T 1k07_A 174 SIGV 177 (263)
T ss_dssp CCCC
T ss_pred Cccc
Confidence 9865
No 35
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A
Probab=99.63 E-value=2.8e-15 Score=135.35 Aligned_cols=138 Identities=14% Similarity=0.217 Sum_probs=95.0
Q ss_pred ccEEEEEecCCCCCceEEEecCCC-chHHHHhhcccCCC--CCccEEEecCCchhhhcChHHHHHhhccccccccEEech
Q 020812 111 NTSILIRYPGPSGRRNILIDAGKF-FYHSALRWFPAYGI--RTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAM 187 (321)
Q Consensus 111 ~ss~lI~~~~~~~~~~iLID~G~~-~~~~l~~~l~~~~~--~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~ 187 (321)
.+|++|+ ++++.+|||+|.+ ....+.+.+++.++ .+|++||+||.|.||++|+..+.+. .+++||+++
T Consensus 55 ~n~~li~----~~~~~iLID~G~~~~~~~~~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~-----~~~~v~~~~ 125 (294)
T 3m8t_A 55 IAVYVIK----TSQGLILMDTAMPQSTGMIKDNIAKLGFKVADIKLILNTHAHLDHTGGFAEIKKE-----TGAQLVAGE 125 (294)
T ss_dssp SCCEEEE----ETTEEEEECCCCGGGHHHHHHHHHHTTCCGGGEEEEECSCCCHHHHTTHHHHHHH-----HCCEEEEEG
T ss_pred eEEEEEE----ECCceEEEECCCchhHHHHHHHHHHcCCCHHHCcEEEECCCCccccccHHHHhhc-----cCCEEEECh
Confidence 3589999 4778999999975 34556666666665 4799999999999999999998764 268999999
Q ss_pred hhHHHHHhhccccccccCCCCCCCccceeeEEeCCceEEECCEEEEEEEec-cCCCceEEEEEEc--------cEEEeCC
Q 020812 188 RDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVW-HGAGYRSLGFRFG--------NICYISD 258 (321)
Q Consensus 188 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~-H~~g~~s~g~~i~--------~i~ysGD 258 (321)
.+.+.+.....+........ ............+++.+.+++.+++.++.. |++| +++|.++ +++|+||
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~g~~~i~~~~~pgHt~g--~~~~~~~~~~~~~~~~~lf~GD 202 (294)
T 3m8t_A 126 RDKPLLEGGYYPGDEKNEDL-AFPAVKVDRAVKEGDRVTLGDTTLTAHATPGHSPG--CTSWEMTVKDGKEDREVLFFCS 202 (294)
T ss_dssp GGHHHHHHTCBTTBTTCGGG-CCCCCCCSEEECTTCEEEETTEEEEEEECCSSSTT--CEEEEEEEEETTEEEEEEECCC
T ss_pred HHHHHHhcccccCccccccC-CCCCCCCceEeCCCCEEEeCCEEEEEEeCCCCCcc--CEEEEEEccCCCccceEEEEcC
Confidence 99988876422111000000 000001122233467899999888877643 9986 4777663 4999999
Q ss_pred CC
Q 020812 259 VS 260 (321)
Q Consensus 259 t~ 260 (321)
+.
T Consensus 203 ~~ 204 (294)
T 3m8t_A 203 GT 204 (294)
T ss_dssp CC
T ss_pred cc
Confidence 95
No 36
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11
Probab=99.62 E-value=3.3e-16 Score=136.10 Aligned_cols=158 Identities=22% Similarity=0.289 Sum_probs=99.1
Q ss_pred CceEEEEEcccCCCCcccccccCCCCCCCcccccccCCCCCCcccccEEEEEecCCCCCceEEEecCCC-chHHHHhhcc
Q 020812 66 QQSEIVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGNKNRRLNTSILIRYPGPSGRRNILIDAGKF-FYHSALRWFP 144 (321)
Q Consensus 66 ~~~~i~~LGtG~s~g~P~~~~~~~~~~~c~~c~~~~~~~~~~~r~~ss~lI~~~~~~~~~~iLID~G~~-~~~~l~~~l~ 144 (321)
-.|+|+|+|+++.--+|. +.+.+..+|++|+ +++..+|||||.+ ....+.+.++
T Consensus 11 ~~~~~~~~~~~g~~~~p~---------------------~~~~~~~n~~li~----~~~~~iLID~G~~~~~~~l~~~l~ 65 (221)
T 1ztc_A 11 HHMELKILVTGGNVFVPG---------------------RLNAHFSTVVYLE----HKDRRIIIDPGNLSSMDELEEKFS 65 (221)
T ss_dssp CCEEEEEEECCBEEEETT---------------------TEECCBCCEEEEE----ETTEEEEECCCCGGGHHHHHHHHH
T ss_pred cceeEEEEEecceEEecC---------------------CCCCCceEEEEEE----eCCeEEEEECCCCcchHHHHHHHH
Confidence 469999999887632222 1233567899999 4778999999985 3345555555
Q ss_pred cCC--CCCccEEEecCCchhhhcChHHHHHhhccccccccEEechhhHHHHHhhcccccccc-CCCCCCCccceeeEEeC
Q 020812 145 AYG--IRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTS-GIIPGAAVSELQFNIID 221 (321)
Q Consensus 145 ~~~--~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 221 (321)
+.+ +.+|++|++||.|.||++|+..+. +++||+++.. +...+..+.... ..+........++..++
T Consensus 66 ~~g~~~~~i~~ViiTH~H~DH~gg~~~~~--------~~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (221)
T 1ztc_A 66 ELGISPDDITDVLFTHVHLDHIFNSVLFE--------NATFYVHEVY---KTKNYLSFGTIVGRIYSKVISSWKNVVLLK 134 (221)
T ss_dssp HHTCCGGGCCEEECSCCCHHHHGGGGGCT--------TCEEEEEGGG---GGSCGGGGCHHHHHHHHHHHHTCCSEEEEC
T ss_pred HcCCCHHHCcEEEEcCCccccCCchhhCC--------CCEEEEeHHH---hhhhhhhhccchhhhhhhccccccceEEeC
Confidence 554 468999999999999999997653 5789998772 111100000000 00000000001334454
Q ss_pred -CceEEECCEEEEEEEeccCCCceEEEEEEc-----cEEEeCCCCCC
Q 020812 222 -EEPFTVQDLKITPLPVWHGAGYRSLGFRFG-----NICYISDVSEI 262 (321)
Q Consensus 222 -~~~~~~~~~~v~~~p~~H~~g~~s~g~~i~-----~i~ysGDt~~~ 262 (321)
++.+..+++++..+| .|++| +++|.++ +++|+||+.+.
T Consensus 135 ~g~~l~~~~~~v~~~p-GHt~g--~~~~~~~~~~~~~vlftGD~~~~ 178 (221)
T 1ztc_A 135 GEESLFDEKVKVFHTP-WHARE--HLSFLLDTENAGRVLITGDITPN 178 (221)
T ss_dssp SCCEETTTTEEEEECC-SSSTT--CEEEEEEETTTEEEEECGGGSCS
T ss_pred CCCEEECCeEEEEEcC-CCCcc--cEEEEEEcCCCCeEEEEeCcccc
Confidence 344432378888888 49996 4777764 79999999765
No 37
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}
Probab=99.62 E-value=5.3e-15 Score=134.33 Aligned_cols=140 Identities=16% Similarity=0.138 Sum_probs=94.4
Q ss_pred ccEEEEEecCCCCCceEEEecCCC-----------chHHHHhhcccCCCCCccEEEecCCchhhhcChHHHHHhhccccc
Q 020812 111 NTSILIRYPGPSGRRNILIDAGKF-----------FYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQR 179 (321)
Q Consensus 111 ~ss~lI~~~~~~~~~~iLID~G~~-----------~~~~l~~~l~~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~ 179 (321)
++||+|... .+++.+|||+|.. ....+.+.+++.++ +|++|++||.|+||++|+..+.+.+
T Consensus 17 ~~~yli~~~--~~~~~ilID~g~~~~~~~~~~~~~~~~~l~~~l~~~g~-~i~~Il~TH~H~DH~gg~~~l~~~~----- 88 (298)
T 4efz_A 17 TISYLLFDS--GSGECALIDSVLDYDPKSGRTRTASADQLIARVAALGA-RVRWLLETHVHADHLSAAPYLKTRV----- 88 (298)
T ss_dssp BEEEEEECT--TTCEEEEESCCBEEETTTTEEECHHHHHHHHHHHHHTC-EEEEEECSSCCSSSBCCHHHHHHHH-----
T ss_pred cEEEEEEEC--CCCeEEEEcCCCCccccccccCcccHHHHHHHHHHCCC-cceEEEECCCchhhhhhHHHHHHHh-----
Confidence 468999731 2567999999973 34566666677776 5999999999999999999998753
Q ss_pred cccEEechhhHHHHHhhccccccccCCCCCCCccceeeEEeCCceEEECCEEEEEEEec-cCCCceEEEEEEc--c----
Q 020812 180 HIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVW-HGAGYRSLGFRFG--N---- 252 (321)
Q Consensus 180 ~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~-H~~g~~s~g~~i~--~---- 252 (321)
+++||+++...+.+..... .+.....+.. .....+....+++.+.+++.+++.+... |++| +++|.+. +
T Consensus 89 ~a~i~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~g~~l~~g~~~i~vi~tPGHT~g--~~~~~~~~~~~~~~ 164 (298)
T 4efz_A 89 GGEIAIGRHVTRVQDVFGK-LFNAGPAFAH-DGSQFDRLLDDGDTLALGALSIRAMHTPGHTPA--CMTYVVTEAHAAHD 164 (298)
T ss_dssp CCEEEEETTHHHHHHHHHH-HTTCCTTSCS-SSTTSSEEECTTCEEEETTEEEEEEECCSSSTT--CEEEEEEETTCCGG
T ss_pred CCcEEEChhHHHHHHHHHH-hcCCcccccc-cccCCCEEeCCCCEEEECCEEEEEEECCCCCcc--cEEEEECCCccccc
Confidence 5899999887665443211 1110000000 0111233334578999999888776553 8885 4788886 3
Q ss_pred ----EEEeCCCCCC
Q 020812 253 ----ICYISDVSEI 262 (321)
Q Consensus 253 ----i~ysGDt~~~ 262 (321)
++|+||+...
T Consensus 165 ~~~~~lftGD~l~~ 178 (298)
T 4efz_A 165 ARDAAAFVGDTLFM 178 (298)
T ss_dssp GCBCEEECCSSBCC
T ss_pred CCceEEEEcCcccc
Confidence 9999999543
No 38
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0
Probab=99.61 E-value=2.4e-15 Score=130.03 Aligned_cols=125 Identities=22% Similarity=0.193 Sum_probs=92.3
Q ss_pred cccEEEEEecCCCCCceEEEecCCCc--hHHHHhhcccCCCCCccEEEecCCchhhhcChHHHHHhhccccccccEEech
Q 020812 110 LNTSILIRYPGPSGRRNILIDAGKFF--YHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAM 187 (321)
Q Consensus 110 ~~ss~lI~~~~~~~~~~iLID~G~~~--~~~l~~~l~~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~ 187 (321)
..+|++|+ ++++.+|||||.+. ...+.+.++.....+|++|++||.|.||++|+..+.+. +++||+++
T Consensus 30 ~~n~~li~----~~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~------~~~v~~~~ 99 (219)
T 3l6n_A 30 SANSMYLV----TKKGVVLFDVPWEKVQYQSLMDTIKKRHNLPVVAVFATHSHDDRAGDLSFFNNK------GIKTYATA 99 (219)
T ss_dssp EEEEEEEE----ETTEEEEESCCSSGGGHHHHHHHHHHHHSCCEEEEECSSSSTTTTCCTHHHHHT------TCEEEECH
T ss_pred cceEEEEE----eCCEEEEEeCCCChHHHHHHHHHHHHhcCCceeEEEecCCCcccccCHHHHHhC------CCEEEEcH
Confidence 35789998 47889999999753 34455555442235899999999999999999998752 68999999
Q ss_pred hhHHHHHhhccccccccCCCCCCCccceeeEEe-CCceEEECCEEEEEEE--eccCCCceEEEEEEc--cEEEeCCCCC
Q 020812 188 RDFEVMKKTHYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQDLKITPLP--VWHGAGYRSLGFRFG--NICYISDVSE 261 (321)
Q Consensus 188 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~p--~~H~~g~~s~g~~i~--~i~ysGDt~~ 261 (321)
.+.+.+.+... . .....+ +++.+.+++.+++.++ ..|++| +++|.+. +++|+||+..
T Consensus 100 ~~~~~~~~~~~------------~---~~~~~~~~g~~~~~g~~~i~~~~~~pgHt~g--~~~~~~~~~~~lf~GD~~~ 161 (219)
T 3l6n_A 100 KTNEFLKKDGK------------A---TSTEIIKTGKPYRIGGEEFVVDFLGEGHTAD--NVVVWFPKYNVLDGGCLVK 161 (219)
T ss_dssp HHHHHHHHTTC------------C---CCSEECCTTSEEEETTEEEEEECCCCSSSSS--CCEEEETTTTEEEEETTSC
T ss_pred HHHHHHHhcCC------------C---CCcEecCCCCEEEECCEEEEEEeCCCCCCCC--CEEEEECCCCEEEECCeee
Confidence 99888765310 0 012233 3678899999888875 359985 4777775 8999999864
No 39
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=99.61 E-value=9.9e-15 Score=134.54 Aligned_cols=163 Identities=16% Similarity=0.181 Sum_probs=107.5
Q ss_pred CceEEEecCCCchHHHHhhcccCCCCCccEEEecCCchhhhcChHHHHHhhccccccccEEechhhHHHHHhhccccccc
Q 020812 124 RRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDT 203 (321)
Q Consensus 124 ~~~iLID~G~~~~~~l~~~l~~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~ 203 (321)
+..+.||.-.. . + ..+|++|||||.|.||++|++.+. +++||+++.+.+.++.........
T Consensus 9 g~~i~vD~f~~--~---~------~~~i~ai~lTH~H~DHiggl~~l~--------~~pVy~s~~t~~ll~~~l~~~~~~ 69 (336)
T 3zdk_A 9 HTPIAVDFWSL--R---R------AGTARLFFLSHMHSDHTVGLSSTW--------ARPLYCSPITAHLLHRHLQVSKQW 69 (336)
T ss_dssp TSSEEESCCCH--H---H------HCSSCEEECCCCCGGGSTTCSTTC--------CSCEEECHHHHHHHHHHHCCCTTT
T ss_pred CCCEeecCCcc--c---C------CCCCCEEEECCChHHHHCchHHHc--------CCCEEecHHHHHHHHHhhhhcccc
Confidence 45688886431 1 1 247999999999999999998852 479999999998887653211000
Q ss_pred cCCCCCCCccceeeEEeCCceEEECCEEEEEEEeccCCCceEEEEEEc----cEEEeCCCCCCCcchhh----hcCCCCE
Q 020812 204 SGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAGYRSLGFRFG----NICYISDVSEIPEETYP----FLQDCEI 275 (321)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~H~~g~~s~g~~i~----~i~ysGDt~~~~~~~~~----~~~~~dl 275 (321)
.. ....-+...++++.+.+++++|+++++.|.+ .+++|+++ +++|+||+...++.+.. ..+++|+
T Consensus 70 ---~~--~~~~~~~~~i~~~~~~~g~~~v~~~~~~H~~--gs~~~~i~~~~~~i~~tGD~~~~~~~~~~~~l~~~~~vD~ 142 (336)
T 3zdk_A 70 ---IQ--ALEVGESHVLPLDEIGQETMTVTLLDANHCP--GSVMFLFEGYFGTILYTGDFRYTPSMLKEPALTLGKQIHT 142 (336)
T ss_dssp ---EE--ECCTTSEEEEESSSSSSCEEEEEEEECSSST--TCEEEEEEETTEEEEECCSCCCCGGGGGCGGGSSCCCCSE
T ss_pred ---eE--ecCCCCeEEecCcccccCCEEEEEEECCCCc--ceEEEEEEeCCceEEEeCCCCCCcccccchhhhccCCccE
Confidence 00 0000011112223334588999999999988 46888885 89999999876442221 2578999
Q ss_pred EEEcccCCCCCCCCCCCHHH----HHHHHHHhCC-eEEEEecc
Q 020812 276 LIMDALRPDRSSSTHFGLPR----VDKFLAYSGN-QFTLSNMS 313 (321)
Q Consensus 276 li~ea~~~~~~~~~H~~~~~----a~~~~~~~~~-~~vltH~~ 313 (321)
|++|+|+.+... .+.+.++ +.+++++... ++++.+|+
T Consensus 143 Li~DsT~~~~~~-~~pse~~v~~~l~~~i~~~~~g~vii~~f~ 184 (336)
T 3zdk_A 143 LYLDNTNCNPAL-VLPSRQEAAHQIVQLIRKHPQHNIKIGLYS 184 (336)
T ss_dssp EEECCTBCCTTC-CCCCHHHHHHHHHHHHHTCTTSEEEEEECS
T ss_pred EEEecCCCCCCC-CCCCHHHHHHHHHHHHHhCCCCcEEEeecc
Confidence 999999987432 3445444 3444455544 88888874
No 40
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2
Probab=99.60 E-value=8.2e-15 Score=130.47 Aligned_cols=118 Identities=19% Similarity=0.263 Sum_probs=84.8
Q ss_pred ccEEEEEecCCCCCceEEEecCCCchHHHHhhcccCCCCCccEEEecCCchhhhcChHHHHHhhccccccccEEechhhH
Q 020812 111 NTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDF 190 (321)
Q Consensus 111 ~ss~lI~~~~~~~~~~iLID~G~~~~~~l~~~l~~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~~~ 190 (321)
++||+|.. .+++.+|||+|.+ ..+.+.+++.++ +|++|++||.|.||++|+..+.+.+ +.++||+++...
T Consensus 19 n~~yli~~---~~~~~vlID~G~~--~~i~~~l~~~g~-~i~~Il~TH~H~DH~gg~~~l~~~~----~~~~v~~~~~~~ 88 (258)
T 2qed_A 19 NYIWVLTN---DEGRCVIVDPGEA--APVLKAIAEHKW-MPEAIFLTHHHHDHVGGVKELLQHF----PQMTVYGPAETQ 88 (258)
T ss_dssp EEEEEEEC---TTSEEEEECCSCH--HHHHHHHHHHTC-EEEEEECCSCCHHHHTTHHHHHHHC----TTCEEEECGGGG
T ss_pred eEEEEEEE---CCCcEEEEeCCCc--HHHHHHHHHcCC-CCCEEEeCCCCccccCCHHHHHHHC----CCCEEEeccccc
Confidence 45899982 1567999999964 345555656666 8999999999999999999987752 358999997652
Q ss_pred HHHHhhccccccccCCCCCCCccceeeEEeCCceEEECCEEEEEEEe-ccCCCceEEEEEEccEEEeCCCCC
Q 020812 191 EVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPV-WHGAGYRSLGFRFGNICYISDVSE 261 (321)
Q Consensus 191 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~-~H~~g~~s~g~~i~~i~ysGDt~~ 261 (321)
. ++ ......+++.+.+++.+++.++. .|++|+ ++|.-++++|+||+..
T Consensus 89 ------~----------~~-----~~~~~~~g~~~~~g~~~~~vi~tPGHt~g~--~~~~~~~~lftGD~l~ 137 (258)
T 2qed_A 89 ------D----------KG-----ATHLVGDGDTIRVLGEKFTLFATPGHTLGH--VCYFSRPYLFCGDTLF 137 (258)
T ss_dssp ------G----------GT-----CSEECCTTCEEEETTEEEEEEECCSSSTTC--EEEEETTEEEEETTEE
T ss_pred ------C----------CC-----CcEEeCCCCEEEECCcEEEEEECCCCCCCC--eEEEcCCEEEECCCCC
Confidence 0 00 01112246788999877776654 399864 6666559999999953
No 41
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A
Probab=99.58 E-value=1.3e-14 Score=126.43 Aligned_cols=137 Identities=15% Similarity=0.106 Sum_probs=89.0
Q ss_pred ccEEEEEecCCCCCceEEEecCCCc--hHHHHhhcccCCCCCccEEEecCCchhhhcChHHHHHhhccccccccEEechh
Q 020812 111 NTSILIRYPGPSGRRNILIDAGKFF--YHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMR 188 (321)
Q Consensus 111 ~ss~lI~~~~~~~~~~iLID~G~~~--~~~l~~~l~~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~ 188 (321)
.++++|+ ++++.+|||+|.+. ...+.+.+++....+|++|++||.|.||++|+..+.+ ++++||+++.
T Consensus 26 ~n~~li~----~~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~~~~------~~~~v~~~~~ 95 (233)
T 3q6v_A 26 ENSMVYI----GTDGITIIGATWTPETAETLYKEIRKVSPLPINEVINTNYHTDRAGGNAYWKT------LGAKIVATQM 95 (233)
T ss_dssp EEEEEEE----CSSCEEEESCCSSHHHHHHHHHHHHHHCCCCEEEEECSSSSHHHHTTHHHHHH------TTCEEEEEHH
T ss_pred CcEEEEE----eCCeEEEEECCCCHHHHHHHHHHHHHhcCCCcEEEEECCCChhhhChHHHHhh------CCCEEEEcHH
Confidence 4688898 57889999999874 3456665555566789999999999999999998873 3689999998
Q ss_pred hHHHHHhhccccc---cc-cCCCCCCCccceeeEEeC-CceEEECCEEEEEE-EeccCCCceEEEEEEc--cEEEeCCCC
Q 020812 189 DFEVMKKTHYYLV---DT-SGIIPGAAVSELQFNIID-EEPFTVQDLKITPL-PVWHGAGYRSLGFRFG--NICYISDVS 260 (321)
Q Consensus 189 ~~~~l~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~-p~~H~~g~~s~g~~i~--~i~ysGDt~ 260 (321)
+.+.+.+...... .. ....+........ ..++ +..+..+++++..+ |+ |++|+ +++.+. +++| ||+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~v~~~~pG-Ht~g~--~~~~~~~~~~lf-gD~~ 170 (233)
T 3q6v_A 96 TYDLQKSQWGSIVNFTRQGNNKYPNLEKSLPD-TVFPGDFNLQNGSIRAMYLGEA-HTKDG--IFVYFPAERVLY-GNCI 170 (233)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTCCCCCCCCCS-EEESSCEEETTTTEEEECCCCS-SSSSC--CEEEETTTTEEE-CTTT
T ss_pred HHHHHHhhhHHHHHHHhccccccccccccCCC-EEeCCCeEEcCceEEEEECCCC-CCcCc--EEEEeccCCEEE-Ccee
Confidence 8877665321100 00 0000110011111 1233 33333456777777 55 99964 666664 9999 9985
Q ss_pred CC
Q 020812 261 EI 262 (321)
Q Consensus 261 ~~ 262 (321)
..
T Consensus 171 ~~ 172 (233)
T 3q6v_A 171 LK 172 (233)
T ss_dssp SC
T ss_pred cc
Confidence 43
No 42
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A
Probab=99.58 E-value=4.7e-15 Score=132.45 Aligned_cols=162 Identities=15% Similarity=0.166 Sum_probs=108.2
Q ss_pred CccCCCCCceEEEEEcccCCCCcccccccCCCCCCCcccccccCCCCCCcccccEEEEEecCCCCCceEEEecCCC--ch
Q 020812 59 NGVQLPAQQSEIVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGNKNRRLNTSILIRYPGPSGRRNILIDAGKF--FY 136 (321)
Q Consensus 59 ~~~~~~~~~~~i~~LGtG~s~g~P~~~~~~~~~~~c~~c~~~~~~~~~~~r~~ss~lI~~~~~~~~~~iLID~G~~--~~ 136 (321)
+.++.+.++++++-|..|.-. ++.... .+......++++|+ ++++.+|||+|.+ ..
T Consensus 34 ~~~~~~~g~~~~~~l~dgv~~-~~~~~~-----------------~~~~~~~~n~~li~----~~~~~iLID~G~~~~~~ 91 (265)
T 2y8b_A 34 TVDDIPVGEVRLYKIGDGVWS-HIATQK-----------------LGDTVYSSNGLIVR----DADELLLIDTAWGAKNT 91 (265)
T ss_dssp CTTTSCTTCCEEEEEETTEEE-EEEEEE-----------------ETTEEEEEEEEEEE----ETTEEEEESCCSSHHHH
T ss_pred ChhhcccCCceEEEecCCeEE-Eecccc-----------------CCCCcccceEEEEE----ECCeEEEEeCCCCHHHH
Confidence 345678889999999876431 111000 00112356899999 4788999999986 23
Q ss_pred HHHHhhcccC-CCCCccEEEecCCchhhhcChHHHHHhhccccccccEEechhhHHHHHhhccccccccCCCCCCCccce
Q 020812 137 HSALRWFPAY-GIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSEL 215 (321)
Q Consensus 137 ~~l~~~l~~~-~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 215 (321)
.++.+.+++. +. +|++|++||.|.||++|+..+.+ .+++||+++.+.+.+....... +. . .+
T Consensus 92 ~~l~~~l~~~~g~-~i~~VilTH~H~DH~gg~~~~~~------~~a~v~~~~~~~~~~~~~~~~~-------~~--~-~~ 154 (265)
T 2y8b_A 92 VALLAEIEKQIGL-PVTRSISTHFHDDRVGGVDVLRA------AGVATYTSPLTRQLAEAAGNEV-------PA--H-SL 154 (265)
T ss_dssp HHHHHHHHHHTCS-CEEEEECSSSSHHHHTTHHHHHH------TTCEEEECHHHHHHHHHTTCCC-------CS--E-EC
T ss_pred HHHHHHHHHhcCC-CeEEEEeCCCChhhcCCHHHHhh------CCCeEEECHHHHHHHHhccccc-------cc--c-cc
Confidence 4566655555 54 79999999999999999998765 2689999999988876532110 00 0 00
Q ss_pred eeEEeCCceEEECCEEEE-EEEeccCCCceEEEEEEc--cEEEeCCCCCC
Q 020812 216 QFNIIDEEPFTVQDLKIT-PLPVWHGAGYRSLGFRFG--NICYISDVSEI 262 (321)
Q Consensus 216 ~~~~~~~~~~~~~~~~v~-~~p~~H~~g~~s~g~~i~--~i~ysGDt~~~ 262 (321)
.-..-+++.+.++++++. ..|+ |++|+ ++|.+. +++|+||+...
T Consensus 155 ~~~~~~~~~~~~g~~~v~~~~pG-Ht~g~--~~~~~~~~~~lf~GD~~~~ 201 (265)
T 2y8b_A 155 KALSSSGDVVRFGPVEVFYPGAA-HSGDN--LVVYVPAVRVLFGGCAVHE 201 (265)
T ss_dssp SSCSSTTEEEEETTEEEEECCSS-SSTTC--CEEEETTTTEEEEETTSCC
T ss_pred cccCCCCcEEeecCEEEEecCCC-CCCCC--EEEEecCCCEEEEcccccc
Confidence 000012456777888884 4565 99965 677775 89999998654
No 43
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural GE consortium, NESG, NSR435A, DFA5, electron transport; 1.80A {Nostoc SP} PDB: 4fek_A
Probab=99.58 E-value=5.7e-15 Score=131.65 Aligned_cols=125 Identities=15% Similarity=0.167 Sum_probs=89.8
Q ss_pred ccEEEEEecCCCCCceEEEecCCCc-hHHHHhhccc-CCCCCccEEEecCCchhhhcChHHHHHhhccccccccEEechh
Q 020812 111 NTSILIRYPGPSGRRNILIDAGKFF-YHSALRWFPA-YGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMR 188 (321)
Q Consensus 111 ~ss~lI~~~~~~~~~~iLID~G~~~-~~~l~~~l~~-~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~ 188 (321)
.+||+|+ + ++.+|||||.+. ..++.+.+++ .+..+|++|++||.|.||++|+..+.+. .++++||+++.
T Consensus 43 ~N~yli~----~-~~~iLID~G~~~~~~~~~~~l~~~~~~~~i~~IilTH~H~DH~gg~~~l~~~----~~~~~v~~~~~ 113 (262)
T 3hnn_A 43 SNSYVIE----G-DKTAIIDPPVESFMKIYLEALQQTVNLKKLDYVILGHFSPNRIPTFKALLEL----APQITFVCSLP 113 (262)
T ss_dssp EEEEEEE----S-SSEEEECCCCHHHHHHHHHHHHHHSCGGGEEEEECSSCCGGGHHHHHHHHHH----CTTCEEEECHH
T ss_pred EEEEEEE----C-CCEEEEECCCcchHHHHHHHHHHhCChhhCCEEEECCCCcchhchHHHHHHH----CCCCEEEECHH
Confidence 4689999 4 689999999862 3344444443 3557899999999999999999998874 35799999999
Q ss_pred hHHHHHhhccccccccCCCCCCCccceeeEEeC-CceEEEC-CEE--EEEEEeccCCCceEEEEEEc--cEEEeCCC
Q 020812 189 DFEVMKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQ-DLK--ITPLPVWHGAGYRSLGFRFG--NICYISDV 259 (321)
Q Consensus 189 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~--v~~~p~~H~~g~~s~g~~i~--~i~ysGDt 259 (321)
+.+.+...+.. .......++ ++.++++ +.+ +..+|+.|++|+ +.+.+. +++|+||+
T Consensus 114 ~~~~l~~~~~~-------------~~~~~~~~~~g~~l~lg~~~~~~~i~tpg~Ht~g~--~~~~~~~~~~lfsGD~ 175 (262)
T 3hnn_A 114 AAGDLRAAFPD-------------DNLNILPMRGKETLDLGKGHVLKFLPIPSPRWPAG--LCTYDVQTQILYTDKI 175 (262)
T ss_dssp HHHHHHHHSSS-------------SCCEEEECCSSCEEECSTTCEEEEEECCCSSCTTC--EEEEETTTTEEEEETT
T ss_pred HHHHHHHHhCC-------------CCCceEEeCCCCEEEcCCCcEEEEEECCCCCCCCe--eEEEeCCCCEEEEeec
Confidence 88877664220 011334444 6788998 654 445565689864 556564 99999998
No 44
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=99.58 E-value=1.9e-14 Score=128.18 Aligned_cols=118 Identities=18% Similarity=0.256 Sum_probs=84.1
Q ss_pred ccEEEEEecCCCCCceEEEecCCCchHHHHhhcccCCCCCccEEEecCCchhhhcChHHHHHhhccccccccEEechhhH
Q 020812 111 NTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDF 190 (321)
Q Consensus 111 ~ss~lI~~~~~~~~~~iLID~G~~~~~~l~~~l~~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~~~ 190 (321)
++||+|... .++..+|||+|.+ ..+.+.+++.++ +|++|++||.|+||++|+..+.+. .+.++||+++...
T Consensus 12 n~~yli~~~--~~~~~vlID~G~~--~~i~~~l~~~g~-~i~~IllTH~H~DH~gg~~~l~~~----~~~~~v~~~~~~~ 82 (260)
T 1qh5_A 12 NYMYLVIDD--ETKEAAIVDPVQP--QKVVDAARKHGV-KLTTVLTTHHHWDHAGGNEKLVKL----ESGLKVYGGDDRI 82 (260)
T ss_dssp EEEEEEEET--TTTEEEEESCSSH--HHHHHHHHHHTC-EEEEEECCCSSHHHHTTHHHHHHH----STTCEEEESCTTS
T ss_pred eEEEEEEEC--CCCEEEEEcCCCH--HHHHHHHHHcCC-CccEEEeCCCCccccCCHHHHHHH----CCCCEEEECcccC
Confidence 458999841 1467999999953 456666666676 699999999999999999998775 2468999985321
Q ss_pred HHHHhhccccccccCCCCCCCccceeeEEeCCceEEECCEEEEEEEe-ccCCCceEEEEEE-------ccEEEeCCCCC
Q 020812 191 EVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPV-WHGAGYRSLGFRF-------GNICYISDVSE 261 (321)
Q Consensus 191 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~-~H~~g~~s~g~~i-------~~i~ysGDt~~ 261 (321)
++ ......+++.+.+++.+++.+.. .|++| +++|.+ .+++|+||+..
T Consensus 83 -----------------~~-----~~~~~~~g~~~~~g~~~~~vi~tPGHt~g--~~~~~~~~~~~~~~~~lftGD~l~ 137 (260)
T 1qh5_A 83 -----------------GA-----LTHKITHLSTLQVGSLNVKCLATPCHTSG--HICYFVSKPGGSEPPAVFTGDTLF 137 (260)
T ss_dssp -----------------TT-----CSEECCTTCEEEETTEEEEEEECCSSSTT--CEEEEEECSSSSSCCEEEEETTEE
T ss_pred -----------------CC-----CCEEeCCCCEEEECCEEEEEEECCCCCCC--CEEEEEeccCCCCCCEEEEcCccc
Confidence 01 01122346788899877776543 38886 477877 38999999843
No 45
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*
Probab=99.57 E-value=6.9e-15 Score=128.51 Aligned_cols=124 Identities=15% Similarity=0.228 Sum_probs=91.7
Q ss_pred ccEEEEEecCCCCCceEEEecCCCc--hHHHHhhcccCCCCCccEEEecCCchhhhcChHHHHHhhccccccccEEechh
Q 020812 111 NTSILIRYPGPSGRRNILIDAGKFF--YHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMR 188 (321)
Q Consensus 111 ~ss~lI~~~~~~~~~~iLID~G~~~--~~~l~~~l~~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~ 188 (321)
++|++|+ ++++.+|||+|.+. ..++.+.+++.+..+|++|++||.|.||++|+..+.+ .+++||+++.
T Consensus 37 ~n~~li~----~~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~~~~------~~~~v~~~~~ 106 (232)
T 1a7t_A 37 SNGMIVI----NNHQAALLDTPINDAQTEMLVNWVTDSLHAKVTTFIPNHWHGDCIGGLGYLQR------KGVQSYANQM 106 (232)
T ss_dssp EEEEEEE----ETTEEEEESCCSSHHHHHHHHHHHHHHHCCEEEEEECSSSSHHHHTTHHHHHH------TTCEEEEEHH
T ss_pred ceEEEEE----eCCEEEEEeCCCCHHHHHHHHHHHHHhcCCCeEEEEeCCCCccccCCHHHHHh------CCCeEEEcHH
Confidence 5799999 47789999999862 3445555555534689999999999999999998875 2689999999
Q ss_pred hHHHHHhhccccccccCCCCCCCccceeeEEeC-CceEEECCEEEEEEE--eccCCCceEEEEEEc--cEEEeCCCCC
Q 020812 189 DFEVMKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLP--VWHGAGYRSLGFRFG--NICYISDVSE 261 (321)
Q Consensus 189 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~p--~~H~~g~~s~g~~i~--~i~ysGDt~~ 261 (321)
+.+.+.+.. . + . ....+. ++.+.+++.+++.+. ..|++| +++|.+. +++|+||+..
T Consensus 107 ~~~~~~~~~---~------~---~---~~~~~~~g~~~~~g~~~i~~~~~~pgHt~g--~~~~~~~~~~~lf~GD~~~ 167 (232)
T 1a7t_A 107 TIDLAKEKG---L------P---V---PEHGFTDSLTVSLDGMPLQCYYLGGGHATD--NIVVWLPTENILFGGCMLK 167 (232)
T ss_dssp HHHHHHHHT---C------C---C---CSEEESSEEEEEETTEEEEEECCCCSSSTT--CCEEEETTTTEEEEETTSC
T ss_pred HHHHHHhcC---C------C---C---CceecCCCCEEEECCeEEEEEeCCCCCCCC--CEEEEECCCCEEEEcCccc
Confidence 887776531 0 0 0 112233 567889998888773 359986 4777774 9999999865
No 46
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A
Probab=99.57 E-value=2.4e-14 Score=127.78 Aligned_cols=138 Identities=18% Similarity=0.186 Sum_probs=92.7
Q ss_pred ccEEEEEecCCCCCceEEEecCCC-chHHHHhhcccCCC--CCccEEEecCCchhhhcChHHHHHhhccccccccEEech
Q 020812 111 NTSILIRYPGPSGRRNILIDAGKF-FYHSALRWFPAYGI--RTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAM 187 (321)
Q Consensus 111 ~ss~lI~~~~~~~~~~iLID~G~~-~~~~l~~~l~~~~~--~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~ 187 (321)
.+|++|+. +++.+|||+|.+ ....+.+.+++.++ .+|++||+||.|.||++|+..+.+.. +++||+++
T Consensus 38 ~~~~li~~----~~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~IilTH~H~DH~gg~~~l~~~~-----~~~v~~~~ 108 (269)
T 1sml_A 38 LTALLVQT----PDGAVLLDGGMPQMASHLLDNMKARGVTPRDLRLILLSHAHADHAGPVAELKRRT-----GAKVAANA 108 (269)
T ss_dssp BCCEEEEE----TTEEEEECCBSGGGHHHHHHHHHHTTCCGGGEEEEECSCCSHHHHTTHHHHHHHS-----SCEEEECH
T ss_pred cEEEEEEe----CCceEEEECCCCccHHHHHHHHHHcCCChHHCcEEEeCCCCccccCCHHHHHHhc-----CCeEEECH
Confidence 46899994 678999999986 34556666666665 48999999999999999999987642 58899999
Q ss_pred hhHHHHHhhccccccccCCCCCCCccceeeEEe-CCceEEECCEEEEEEEec-cCCCceEEEEEEc-------cEEEeCC
Q 020812 188 RDFEVMKKTHYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQDLKITPLPVW-HGAGYRSLGFRFG-------NICYISD 258 (321)
Q Consensus 188 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~p~~-H~~g~~s~g~~i~-------~i~ysGD 258 (321)
.+.+.+........... .... ..+......+ +++.+.+++++++.++.. |++|+ ++|.+. ..++.||
T Consensus 109 ~~~~~l~~~~~~~~~~~-~~~~-~~~~~~~~~~~~g~~~~~g~~~i~~~~~pGHt~g~--~~~~~~~~~~~~~~~l~~gD 184 (269)
T 1sml_A 109 ESAVLLARGGSDDLHFG-DGIT-YPPANADRIVMDGEVITVGGIVFTAHFMAGHTPGS--TAWTWTDTRNGKPVRIAYAD 184 (269)
T ss_dssp HHHHHHHTTTCSBTTTB-TSSC-CCCCCCSEECCTTCEEEETTEEEEEEECCSSSTTC--EEEEEEEEETTEEEEEEECC
T ss_pred HHHHHHhcCCccccccc-cccC-CCCCCCCeEeCCCCEEEECCEEEEEEECCCCCccc--EEEEEecccCCceeEEEEec
Confidence 88887765321100000 0000 0000012334 367889999888877664 89864 777663 1566699
Q ss_pred CCC
Q 020812 259 VSE 261 (321)
Q Consensus 259 t~~ 261 (321)
+..
T Consensus 185 ~l~ 187 (269)
T 1sml_A 185 SLS 187 (269)
T ss_dssp CCC
T ss_pred ccc
Confidence 854
No 47
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A
Probab=99.57 E-value=2.2e-14 Score=127.33 Aligned_cols=120 Identities=16% Similarity=0.262 Sum_probs=85.4
Q ss_pred ccEEEEEecCCCCCceEEEecCCCchHHHHhhcccCCCCCccEEEecCCchhhhcChHHHHHhhccccccccEEechhhH
Q 020812 111 NTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDF 190 (321)
Q Consensus 111 ~ss~lI~~~~~~~~~~iLID~G~~~~~~l~~~l~~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~~~ 190 (321)
++||+|... .++..+|||+|.. ..+.+.+++.+. +|++|++||.|+||++|+..+.+.+ +++||+++...
T Consensus 12 n~~yli~~~--~~~~~~lID~g~~--~~i~~~l~~~g~-~i~~Il~TH~H~DH~gg~~~l~~~~-----~~~v~~~~~~~ 81 (254)
T 1xm8_A 12 NYAYILHDE--DTGTVGVVDPSEA--EPIIDSLKRSGR-NLTYILNTHHHYDHTGGNLELKDRY-----GAKVIGSAMDK 81 (254)
T ss_dssp EEEEEEECT--TTCCEEEECCSSH--HHHHHHHHHHTC-CCCEEECSSCCHHHHTTHHHHHHHH-----CCEEEEEGGGG
T ss_pred eEEEEEEEC--CCCEEEEEeCCCH--HHHHHHHHHcCC-CccEEEECCCCCcccccHHHHHHHc-----CCeEEEchhhh
Confidence 569999831 1357899999953 345555555665 7999999999999999999988753 58899997654
Q ss_pred HHHHhhccccccccCCCCCCCccceeeEEeCCceEEECCEEEEEEEe-ccCCCceEEEEEEc--cEEEeCCCCC
Q 020812 191 EVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPV-WHGAGYRSLGFRFG--NICYISDVSE 261 (321)
Q Consensus 191 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~-~H~~g~~s~g~~i~--~i~ysGDt~~ 261 (321)
+.+ ++ ......+++.+.+++.+++.+.. .|++| +++|.+. +++|+||+..
T Consensus 82 ~~~--------------~~-----~~~~~~~g~~~~lg~~~~~vi~tPGHt~g--~~~~~~~~~~~lftGD~l~ 134 (254)
T 1xm8_A 82 DRI--------------PG-----IDMALKDGDKWMFAGHEVHVMDTPGHTKG--HISLYFPGSRAIFTGDTMF 134 (254)
T ss_dssp GGS--------------TT-----EEEEECTTCEEEETTEEEEEEECCSSSSS--CEEEEEGGGTEEEEETTEE
T ss_pred hcC--------------CC-----CceeeCCCCEEEECCEEEEEEECCCCCCC--cEEEEECCCCEEEEcCccc
Confidence 321 11 12223346788999977776543 29986 4788885 8999999954
No 48
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=99.56 E-value=1.7e-14 Score=125.12 Aligned_cols=125 Identities=17% Similarity=0.169 Sum_probs=91.5
Q ss_pred cccEEEEEecCCCCCceEEEecCCC--chHHHHhhcccC-CCCCccEEEecCCchhhhcChHHHHHhhccccccccEEec
Q 020812 110 LNTSILIRYPGPSGRRNILIDAGKF--FYHSALRWFPAY-GIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVA 186 (321)
Q Consensus 110 ~~ss~lI~~~~~~~~~~iLID~G~~--~~~~l~~~l~~~-~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~ 186 (321)
..+|++|+ ++++.+|||+|.+ ....+.+.+++. + .+|++|++||.|.||++|+..+.+ ++++||++
T Consensus 26 ~~n~~li~----~~~~~iLiD~G~~~~~~~~~~~~l~~~~g-~~i~~vi~TH~H~DH~gg~~~~~~------~~~~v~~~ 94 (223)
T 1m2x_A 26 AANAVYLV----TDKGVVVIDCPWGEDKFKSFTDEIYKKHG-KKVIMNIATHSHDDRAGGLEYFGK------IGAKTYST 94 (223)
T ss_dssp EEEEEEEE----ETTEEEEESCCSSGGGHHHHHHHHHHHHC-CCEEEEECSSSSTTTTTTHHHHHH------TTCEEEEE
T ss_pred cccEEEEE----eCCEEEEEeCCCChhHHHHHHHHHHHHhC-CCeEEEEeccCCccccCchhhHhh------CCCeEEEc
Confidence 35789999 4778999999985 334555555554 5 489999999999999999998875 26899999
Q ss_pred hhhHHHHHhhccccccccCCCCCCCccceeeEEeCCceEEECCEEEEEEE--eccCCCceEEEEEEc--cEEEeCCCCC
Q 020812 187 MRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLP--VWHGAGYRSLGFRFG--NICYISDVSE 261 (321)
Q Consensus 187 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p--~~H~~g~~s~g~~i~--~i~ysGDt~~ 261 (321)
+.+.+.+...... .+ .....+++.+.+++.+++.+. ..|++| +++|.+. +++|+||+..
T Consensus 95 ~~~~~~~~~~~~~------------~~--~~~~~~g~~~~~g~~~i~~~~~~pgHt~~--~~~~~~~~~~~lf~GD~~~ 157 (223)
T 1m2x_A 95 KMTDSILAKENKP------------RA--QYTFDNNKSFKVGKSEFQVYYPGKGHTAD--NVVVWFPKEKVLVGGCIIK 157 (223)
T ss_dssp HHHHHHHHHTTCC------------CC--SEEESSCEEEEETTEEEEEECCCSSSSSS--CCEEEETTTTEEEEETTSC
T ss_pred HHHHHHHHhcCcc------------CC--ceecCCCceEEECCEEEEEEecCCCCCCC--CEEEEECCCCEEEEecccc
Confidence 9988877653110 00 112223678889998888872 359985 4777775 9999999754
No 49
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B
Probab=99.56 E-value=4.5e-14 Score=127.72 Aligned_cols=140 Identities=19% Similarity=0.260 Sum_probs=93.8
Q ss_pred ccEEEEEecCCCCCceEEEecCCC-chHHHHhhcccCCC--CCccEEEecCCchhhhcChHHHHHhhccccccccEEech
Q 020812 111 NTSILIRYPGPSGRRNILIDAGKF-FYHSALRWFPAYGI--RTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAM 187 (321)
Q Consensus 111 ~ss~lI~~~~~~~~~~iLID~G~~-~~~~l~~~l~~~~~--~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~ 187 (321)
.+|++|+ ++++.+|||+|.. ....+.+.+++.++ ++|++|++||.|.||++|+..+.+.. +++||+++
T Consensus 58 ~~~~li~----~~~~~iLiD~G~~~~~~~~~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~~-----~~~v~~~~ 128 (303)
T 4ax1_B 58 ISALLVT----SDAGHILVDAATPQAGPQILANIRALGFRPEDVRAIVFSHEHFDHAGSLAELQKAT-----GAPVYARA 128 (303)
T ss_dssp SCCEEEC----CTTCEEEECCBSTTCHHHHHHHHHHTTCCGGGEEEEECSCSSHHHHTTHHHHHHHH-----CCCEEEEH
T ss_pred ceEEEEE----eCCcEEEEECCCcccHHHHHHHHHHcCCCHHHCcEEEcCCCCccccCCHHHHHhhc-----CCEEEEcH
Confidence 4689999 5788999999974 44556666666654 46999999999999999999987642 68999999
Q ss_pred hhHHHHHhhccccccccCCCCCCCccceeeEEeC-CceEEECCEEEEEEEec-cCCCceEEEEEEc-------cEEEeCC
Q 020812 188 RDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPVW-HGAGYRSLGFRFG-------NICYISD 258 (321)
Q Consensus 188 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~p~~-H~~g~~s~g~~i~-------~i~ysGD 258 (321)
.+.+.+..........................++ ++.+.+++.+++.++.. |++|+ ++|.+. ..+++||
T Consensus 129 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~v~~~~~pgHt~g~--~~~~~~~~~~~~~~~~l~gD 206 (303)
T 4ax1_B 129 PAIDTLKRGLPDRTDPNFEVAEPVAPVANIVTLADDGVVSVGPLALTAVASPGHTPGG--TSWTWRSCEGDDCRQMVYAD 206 (303)
T ss_dssp HHHHHHHHTSCCTTSTTGGGCCCCCCCSCEEEECTTCEEEETTEEEEEEECCSSSTTC--EEEEEEEEETTEEEEEEECC
T ss_pred HHHHHHhccccCccccccccccCcCCCCCcEEeCCCCEEEECCeEEEEEeCCCCCccc--eEEEEEecCCCceeEEEEeC
Confidence 9988887642110000000000001112334444 67899999888776533 89864 666664 2466699
Q ss_pred CCC
Q 020812 259 VSE 261 (321)
Q Consensus 259 t~~ 261 (321)
+..
T Consensus 207 ~l~ 209 (303)
T 4ax1_B 207 SLT 209 (303)
T ss_dssp CCC
T ss_pred Ccc
Confidence 854
No 50
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}
Probab=99.56 E-value=2.1e-14 Score=131.04 Aligned_cols=140 Identities=14% Similarity=0.149 Sum_probs=92.6
Q ss_pred ccccEEEEEecCCCCCceEEEecCCCch---HHHHhhcccCCC--CCccEEEecCCchhhhcChHHHHHhhccccccccE
Q 020812 109 RLNTSILIRYPGPSGRRNILIDAGKFFY---HSALRWFPAYGI--RTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPI 183 (321)
Q Consensus 109 r~~ss~lI~~~~~~~~~~iLID~G~~~~---~~l~~~l~~~~~--~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v 183 (321)
+..++++|+ +++..+|||+|.+.. ..+.+.+++.++ .+|++|++||.|.||++|+..+.+ . +++|
T Consensus 20 ~~~n~~li~----~~~~~ilID~G~~~~~~~~~l~~~l~~~g~~~~~i~~Vi~TH~H~DH~gg~~~l~~-----~-~~~v 89 (317)
T 2zo4_A 20 KTVNLYLLQ----GAGEVALVDTALGTRAARGALELHLAELGLCFQDVKTILLTHHHPDHYGLSGFFEG-----L-GARV 89 (317)
T ss_dssp CEEEEEEEE----ETTEEEEECCCCSSHHHHHHHHHHHHHTTCCGGGCCEEEESCCSHHHHTTHHHHHH-----T-TCEE
T ss_pred CcEEEEEEE----cCCceEEEECCCCCHHHHHHHHHHHHHcCCChhhcCEEEEcCCCCcccccHHHHHh-----C-CCEE
Confidence 356799999 467899999998752 335555555554 579999999999999999998876 2 5899
Q ss_pred EechhhHHHHHhhccc----------cccccCCCCCC---------------CccceeeEEe-CCceEEECCEEEEEEEe
Q 020812 184 YVAMRDFEVMKKTHYY----------LVDTSGIIPGA---------------AVSELQFNII-DEEPFTVQDLKITPLPV 237 (321)
Q Consensus 184 ~~~~~~~~~l~~~~~~----------~~~~~~~~~~~---------------~~~~~~~~~~-~~~~~~~~~~~v~~~p~ 237 (321)
|+++.+.+.+...... .+... ..+.. .........+ +++.+.+++.+++.+.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~gg~~~~~i~t 168 (317)
T 2zo4_A 90 FLHEEEFARGHRFWREPEAFAEASWRLFLDH-GTPEGALQGIRETVEKTRERVHPPQNPLPLRDGEALEVAGKRLRVLWT 168 (317)
T ss_dssp EEEGGGTTTHHHHHHCTTTSHHHHHHHHHHT-TCCC-------CHHHHHHTTCCCCSSCEEECTTCEEEETTEEEEEEEC
T ss_pred EEcHHHHHHHHhhhhhhhhHHHHHHHHHHHc-CCCHHHHHHHHHhcccccccCCCCCCceEECCCCEEEeCCceEEEEEC
Confidence 9998886655432110 00000 00000 0001122334 46788999977776654
Q ss_pred -ccCCCceEEEEEEc--cEEEeCCCCC
Q 020812 238 -WHGAGYRSLGFRFG--NICYISDVSE 261 (321)
Q Consensus 238 -~H~~g~~s~g~~i~--~i~ysGDt~~ 261 (321)
.|++|+ ++|.+. +++|+||+..
T Consensus 169 pGHt~g~--~~~~~~~~~~lf~GD~~~ 193 (317)
T 2zo4_A 169 PGHADGH--AAFYLEEEGVLLAGDALL 193 (317)
T ss_dssp CSSSTTC--EEEEETTTTEEEEETSCC
T ss_pred CCCCccc--EEEEeCCCCEEEECCEec
Confidence 399965 667774 9999999864
No 51
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=99.56 E-value=2e-14 Score=135.55 Aligned_cols=127 Identities=17% Similarity=0.235 Sum_probs=94.8
Q ss_pred cccEEEEEecCCCCCceEEEecCCC-chHHHHhhcccC-CCCCccEEEecCCchhhhcChHHHHHhhccccccccEEech
Q 020812 110 LNTSILIRYPGPSGRRNILIDAGKF-FYHSALRWFPAY-GIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAM 187 (321)
Q Consensus 110 ~~ss~lI~~~~~~~~~~iLID~G~~-~~~~l~~~l~~~-~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~ 187 (321)
..+|++|+ +++.+|||||.+ ....+.+.+++. +..+|++|++||.|.||++|+..+.+.+ ++++||+++
T Consensus 34 ~~n~~li~-----~~~~iliD~G~~~~~~~~~~~l~~~~~~~~i~~iiiTH~H~DH~gg~~~l~~~~----~~~~v~~~~ 104 (402)
T 1e5d_A 34 TYNAYLVE-----DEKTTLFDTVKAEYKGELLCGIASVIDPKKIDYLVIQHLELDHAGALPALIEAC----QPEKIFTSS 104 (402)
T ss_dssp EEEEEEEC-----SSSCEEECCCCGGGHHHHHHHHHTTSCGGGCCEEEECCCSHHHHTTHHHHHHHH----CCSEEEEEH
T ss_pred ceEEEEEE-----CCCEEEEeCCCCccHHHHHHHHHHhCCcccCCEEEeCCCCccccccHHHHHHHC----CCCEEEECh
Confidence 45789998 347999999986 244555555444 5578999999999999999999987652 468999999
Q ss_pred hhHHHHHhhccccccccCCCCCCCccceeeEEeC-CceEEECCEEEEEEEec--cCCCceEEEEEEc--cEEEeCCCC
Q 020812 188 RDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPVW--HGAGYRSLGFRFG--NICYISDVS 260 (321)
Q Consensus 188 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~p~~--H~~g~~s~g~~i~--~i~ysGDt~ 260 (321)
.+.+.+...+.. + ......++ ++.+.+++.+++.+++. |++| ++++.+. +++|+||+.
T Consensus 105 ~~~~~~~~~~~~--------~-----~~~~~~~~~g~~~~~g~~~~~~~~~p~gH~~~--~~~~~~~~~~~l~~GD~~ 167 (402)
T 1e5d_A 105 LGQKAMESHFHY--------K-----DWPVQVVKHGETLSLGKRTVTFYETRMLHWPD--SMVSWFADEKVLISNDIF 167 (402)
T ss_dssp HHHHHHHHHHCC--------S-----SCCEEEECTTCEEECSSCEEEEEECTTSSSTT--CEEEEETTTTEEEEETTT
T ss_pred HHHHHHHHHhCC--------C-----CCceEEcCCCCEEEECCCEEEEEeCCCCCCCC--cEEEEECCCCEEEecccc
Confidence 998877664221 0 11334444 67889999888888775 9985 4677774 999999994
No 52
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens}
Probab=99.55 E-value=5.6e-14 Score=126.77 Aligned_cols=131 Identities=21% Similarity=0.292 Sum_probs=90.3
Q ss_pred cccccEEEEEecCCCCCceEEEecCCCc----hHHHHhhcccCCCCCccEEEecCCchhhhcChHHHHHhhccccccccE
Q 020812 108 RRLNTSILIRYPGPSGRRNILIDAGKFF----YHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPI 183 (321)
Q Consensus 108 ~r~~ss~lI~~~~~~~~~~iLID~G~~~----~~~l~~~l~~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v 183 (321)
.++.+||+|+ ++++.+|||||.+. ...+.+.++..+. +|++||+||.|.||++|+..+.+.... .+.+++
T Consensus 29 ~~~~n~~li~----~~~~~ilID~G~~~~~~~~~~l~~~l~~~~~-~i~~Ii~TH~H~DH~gg~~~l~~~~~~-~~~~~v 102 (289)
T 4ad9_A 29 LQGTNTYLVG----TGPRRILIDTGEPAIPEYISCLKQALTEFNT-AIQEIVVTHWHRDHSGGIGDICKSINN-DTTYCI 102 (289)
T ss_dssp BTCCEEEEEC----SSSSEEEECCCSTTCHHHHHHHHHHHHHTTC-CEEEEECSCSSHHHHTTHHHHHHHSCC-SSCCCE
T ss_pred CCceEEEEEe----cCCceEEEeCCCCCChHHHHHHHHHHHHcCC-CceEEEEcCCCCcccccHHHHHHhhcc-CCCceE
Confidence 4567899999 57889999999753 2345555555555 899999999999999999999875311 246788
Q ss_pred EechhhHHHHHhhccccccccCCCCCCCccceeeEEeC-CceEEECCEEEEEEEe-ccCCCceEEEEEEc--cEEEeCCC
Q 020812 184 YVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPV-WHGAGYRSLGFRFG--NICYISDV 259 (321)
Q Consensus 184 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~p~-~H~~g~~s~g~~i~--~i~ysGDt 259 (321)
|+++.... .... ... ....+..+. ++.+.+++.+++.+.. .|++| +++|.+. +++|+||+
T Consensus 103 ~~~~~~~~-----~~~~------~~~---~~~~~~~~~~g~~~~~gg~~~~~~~~pGHt~~--~~~~~~~~~~~lftGD~ 166 (289)
T 4ad9_A 103 KKLPRNPQ-----REEI------IGN---GEQQYVYLKDGDVIKTEGATLRVLYTPGHTDD--HMALLLEEENAIFSGDC 166 (289)
T ss_dssp EECCCSSC-----CCCC------BTT---TTBCEEECCTTCEEEETTEEEEEEECCSSSTT--CEEEEETTTTEEEEETS
T ss_pred EecCCCcc-----hhhh------ccC---CCCceEEcCCCCEEEeCCeEEEEEECCCCCCC--CEEEEEcCCCEEEEecc
Confidence 88754310 0000 000 112344454 6889999988877654 48885 4888886 89999997
Q ss_pred C
Q 020812 260 S 260 (321)
Q Consensus 260 ~ 260 (321)
.
T Consensus 167 ~ 167 (289)
T 4ad9_A 167 I 167 (289)
T ss_dssp S
T ss_pred c
Confidence 4
No 53
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=99.55 E-value=2.6e-14 Score=134.80 Aligned_cols=128 Identities=19% Similarity=0.183 Sum_probs=95.7
Q ss_pred ccEEEEEecCCCCCceEEEecCCC-chHHHHhhcccC----CCCCccEEEecCCchhhhcChHHHHHhhccccccccEEe
Q 020812 111 NTSILIRYPGPSGRRNILIDAGKF-FYHSALRWFPAY----GIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYV 185 (321)
Q Consensus 111 ~ss~lI~~~~~~~~~~iLID~G~~-~~~~l~~~l~~~----~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~ 185 (321)
.+|++|+ +++..+|||+|.+ ....+.+.+++. +..+|++|++||.|.||++|+..+.+. .++++||+
T Consensus 35 ~n~~li~----~~~~~iLiD~g~~~~~~~~~~~l~~~~~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~----~p~~~v~~ 106 (404)
T 2ohh_A 35 YNAYLVC----GDEGVALIDNSYPGTFDELMARVEDALQQVGMERVDYIIQNHVEKDHSGVLVELHRR----FPEAPIYC 106 (404)
T ss_dssp ECCEEEE----CSSCEEEECCCCTTCHHHHHHHHHHHHHHHTCCCCCEEECSCCSHHHHTTHHHHHHH----STTCCEEE
T ss_pred EEEEEEE----eCCcEEEEeCCCCccHHHHHHHHHHHhccCCccCCCEEEeCCCCCcccchHHHHHHH----CCCCEEEE
Confidence 4689999 4677999999986 234555555554 567999999999999999999988765 35789999
Q ss_pred chhhHHHHHhhccccccccCCCCCCCccceeeEEeC-CceEEECCEEEEEEEec--cCCCceEEEEEEc--cEEEeCCCC
Q 020812 186 AMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPVW--HGAGYRSLGFRFG--NICYISDVS 260 (321)
Q Consensus 186 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~p~~--H~~g~~s~g~~i~--~i~ysGDt~ 260 (321)
++.+.+.+...+.. . .......+. ++.+.+++.+++.+++. |++| +++|.+. +++|+||+.
T Consensus 107 ~~~~~~~~~~~~~~--~----------~~~~~~~~~~g~~~~~g~~~i~~~~~p~gH~~~--~~~~~~~~~~~lf~GD~~ 172 (404)
T 2ohh_A 107 TEVAVKGLLKHYPS--L----------REAEFMTVKTGDVLDLGGKTLTFLETPLLHWPD--SMFTLLDEDGILFSNDAF 172 (404)
T ss_dssp CHHHHHHHHHHCGG--G----------GGSCEEECCTTCEEECSSCEEEEEECTTSSSTT--CEEEEEETTTEEECTTTT
T ss_pred CHHHHHHHHHHhcc--c----------ccCCceEcCCCCEEEECCEEEEEEeCCCCCCCC--ceEEEECCCcEEEecCcc
Confidence 99988887664221 0 011233444 67888999888888775 9985 4777774 999999985
No 54
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*
Probab=99.55 E-value=4.8e-14 Score=128.85 Aligned_cols=125 Identities=18% Similarity=0.254 Sum_probs=84.0
Q ss_pred ccEEEEEecCCCCCceEEEecCCCchHHHHhhcccC----C----CCCccEEEecCCchhhhcChHHHHHhhcc--cccc
Q 020812 111 NTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAY----G----IRTIDAVIITHSHADAIGGLDDLRDWTNN--VQRH 180 (321)
Q Consensus 111 ~ss~lI~~~~~~~~~~iLID~G~~~~~~l~~~l~~~----~----~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~--~~~~ 180 (321)
++||+|... .+++.+|||+|... ..+.+.+++. + +.+|++|++||.|+||++|+..+.+.+.. ...+
T Consensus 40 n~~ylI~~~--~~~~~ilID~G~~~-~~~~~~l~~~l~~~g~~~~~~~i~~IllTH~H~DH~gg~~~l~~~~~~~~~~~~ 116 (311)
T 2p18_A 40 NFSYLINDH--TTHTLAAVDVNADY-KPILTYIEEHLKQQGNADVTYTFSTILSTHKHWDHSGGNAKLKAELEAMNSTVP 116 (311)
T ss_dssp EEEEEEEET--TTTEEEEESCCSCC-HHHHHHHHHTC--------CCEEEEEEESSSSHHHHTTHHHHHHHHHSCC--CC
T ss_pred cEEEEEEeC--CCCcEEEEeCCCCh-HHHHHHHHHHHhhcCCCCCCCCccEEEeCCCCccccCCHHHHHHhhhhcccCCC
Confidence 458999841 15779999997543 3344444333 6 25899999999999999999998775310 0115
Q ss_pred ccEEechhhHHHHHhhccccccccCCCCCCCccceeeEEeCCceEEECCEEEEEEEe-ccCCCceEEEEEE-------c-
Q 020812 181 IPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPV-WHGAGYRSLGFRF-------G- 251 (321)
Q Consensus 181 ~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~-~H~~g~~s~g~~i-------~- 251 (321)
++||+++... . ++ ....+.+++.+.+++.+++.+++ .|++|+ ++|.+ +
T Consensus 117 ~~v~~~~~~~----------~------~~-----~~~~l~~g~~l~lg~~~l~vi~tPGHT~g~--i~~~~~~~~~~~~~ 173 (311)
T 2p18_A 117 VVVVGGANDS----------I------PA-----VTKPVREGDRVQVGDLSVEVIDAPCHTRGH--VLYKVQHPQHPNDG 173 (311)
T ss_dssp CEEEEEGGGT----------C------TT-----CSEEECTTCEEEETTEEEEEEECCSSSTTC--EEEEEECTTCGGGC
T ss_pred CEEEEechhc----------C------CC-----CceEeCCCCEEEECCeEEEEEECCCCCccc--EEEEEecCCcCCcC
Confidence 7899986541 0 11 11223346788999888777655 599964 77877 4
Q ss_pred cEEEeCCCCC
Q 020812 252 NICYISDVSE 261 (321)
Q Consensus 252 ~i~ysGDt~~ 261 (321)
+++|+||+.+
T Consensus 174 ~~lftGD~l~ 183 (311)
T 2p18_A 174 VALFTGDTMF 183 (311)
T ss_dssp EEEEEETTEE
T ss_pred CEEEEcCccc
Confidence 7999999854
No 55
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=99.55 E-value=3.3e-14 Score=125.60 Aligned_cols=122 Identities=17% Similarity=0.220 Sum_probs=89.3
Q ss_pred cccEEEEEecCCC--CCceEEEecCCCchHHHHhhcccCCCCCccEEEecCCchhhhcChHHHHHhhccccccccEEech
Q 020812 110 LNTSILIRYPGPS--GRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAM 187 (321)
Q Consensus 110 ~~ss~lI~~~~~~--~~~~iLID~G~~~~~~l~~~l~~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~ 187 (321)
.++||||... . +++.+|||+|.+....+.+.+++.++ +|++|++||.|+||++|+..+.+. .+.++||+++
T Consensus 14 ~~~~yli~~~--~~~~~~~ilID~g~~~~~~~~~~l~~~g~-~i~~Il~TH~H~DH~gg~~~l~~~----~~~~~v~~~~ 86 (245)
T 2gcu_A 14 STFTYLLADV--SHPDKPALLIDPVDKTVDRDLKLIDELGL-KLIYAMNTHVHADHVTGTGLLKTK----LPGVKSVISK 86 (245)
T ss_dssp TEEEEEEEET--TSTTCEEEEESCBGGGHHHHHHHHHHHTC-EEEEEECSSCCSSSCBSHHHHHHH----STTCEEEEEG
T ss_pred ceEEEEEEcC--CCCCCcEEEEeCCCchHHHHHHHHHHCCC-eeeEEEeCCCChhhhhhHHHHHHh----CCCCeEEecc
Confidence 3579999841 1 36899999998755566666666676 699999999999999999998763 2468999987
Q ss_pred hhHHHHHhhccccccccCCCCCCCccceeeEEeCCceEEECCEEEEEEEe-ccCCCceEEEEEEc--------cEEEeCC
Q 020812 188 RDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPV-WHGAGYRSLGFRFG--------NICYISD 258 (321)
Q Consensus 188 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~-~H~~g~~s~g~~i~--------~i~ysGD 258 (321)
.... . ......+++.+.+++.+++.+.. .|++| +++|.+. +++|+||
T Consensus 87 ~~~~-----------~-----------~~~~~~~g~~~~~g~~~i~v~~tpGHt~g--~~~~~~~~~~~~~~~~~lftGD 142 (245)
T 2gcu_A 87 ASGS-----------K-----------ADLFLEPGDKVSIGDIYLEVRATPGHTAG--CVTYVTGEGADQPQPRMAFTGD 142 (245)
T ss_dssp GGCC-----------C-----------CSEEECTTCEEEETTEEEEEEECCSSSTT--CEEEEECCSTTSCSSCEEEEET
T ss_pred cccc-----------c-----------CCEEcCCCCEEEECCEEEEEEECCCCCCC--CEEEEECCccccccccEEEECC
Confidence 6421 0 01122346788999988887654 38885 5778774 5999999
Q ss_pred CCCC
Q 020812 259 VSEI 262 (321)
Q Consensus 259 t~~~ 262 (321)
+...
T Consensus 143 ~~~~ 146 (245)
T 2gcu_A 143 AVLI 146 (245)
T ss_dssp TSBT
T ss_pred cccc
Confidence 9653
No 56
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=99.55 E-value=2.5e-14 Score=129.91 Aligned_cols=141 Identities=14% Similarity=0.095 Sum_probs=89.4
Q ss_pred ccEEEEEecCCCCCceEEEecCCCc-hHHHHhhcccC--CCCCccEEEecCCchhhhcChHHHHHhhccccccccEEech
Q 020812 111 NTSILIRYPGPSGRRNILIDAGKFF-YHSALRWFPAY--GIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAM 187 (321)
Q Consensus 111 ~ss~lI~~~~~~~~~~iLID~G~~~-~~~l~~~l~~~--~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~ 187 (321)
.++++|+. .+++.+|||+|.+. ...+.+.+++. +..+|++|++||.|.||++|+..+.+. .++++||+++
T Consensus 24 ~n~~li~~---~~~~~iLID~G~~~~~~~~~~~l~~~~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~----~~~a~v~~~~ 96 (303)
T 2vw8_A 24 VPVFLLRL---GEASWALVEGGISRDAELVWADLCRWVADPSQVHYWLITHKHYDHCGLLPYLCPR----LPNVQVLASE 96 (303)
T ss_dssp SCEEEEEE---ETTEEEEECCCCGGGHHHHHHHHHHHCSCGGGEEEEECCCCSTTTTTTHHHHGGG----CTTCEEEEEH
T ss_pred ceEEEEEe---CCCceEEEECCCCCcHHHHHHHHHHHhcCcccceEEEeccCCccccCCHHHHHHh----CCCCeEEECH
Confidence 45899931 26789999999863 33333333332 457899999999999999999988764 3579999999
Q ss_pred hhHHHHHhhcc--------ccccccC--CCCCCCccceeeEEeC-CceEEECC-EEEEEEEe-ccCCCceEEEEEEc--c
Q 020812 188 RDFEVMKKTHY--------YLVDTSG--IIPGAAVSELQFNIID-EEPFTVQD-LKITPLPV-WHGAGYRSLGFRFG--N 252 (321)
Q Consensus 188 ~~~~~l~~~~~--------~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~-~~v~~~p~-~H~~g~~s~g~~i~--~ 252 (321)
.+.+.+..... ....... ..............++ ++.+++++ .+++.++. .|++|+ ++|.+. +
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~lg~g~~l~~i~~pGHt~g~--~~~~~~~~~ 174 (303)
T 2vw8_A 97 RTCQAWKSESAVRVVERLNRQLLRAEQRLPEACAWDALPVRAVADGEWLELGPRHRLQVIEAHGHSDDH--VVFYDVRRR 174 (303)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTCCTTCCCCCCCCGGGSCEEEECTTCEEEEETTEEEEEEECTTSSTTC--EEEEETTTT
T ss_pred HHHHHHhccchhhHHHHHHHHHHHhhcccccccCCCCCCceEcCCCCEEecCCCeEEEEEECCCCCccc--EEEEECCCC
Confidence 87765432110 0000000 0000011112334444 67788887 66665543 399964 778875 9
Q ss_pred EEEeCCCC
Q 020812 253 ICYISDVS 260 (321)
Q Consensus 253 i~ysGDt~ 260 (321)
++|+||+.
T Consensus 175 ~lf~GD~~ 182 (303)
T 2vw8_A 175 RLFCGDAL 182 (303)
T ss_dssp EEEEETTT
T ss_pred EEEEcCcc
Confidence 99999985
No 57
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=99.54 E-value=2.9e-14 Score=134.28 Aligned_cols=127 Identities=13% Similarity=0.180 Sum_probs=93.7
Q ss_pred cccEEEEEecCCCCCceEEEecCCC-chHHHHhhccc-CCCCCccEEEecCCchhhhcChHHHHHhhccccccccEEech
Q 020812 110 LNTSILIRYPGPSGRRNILIDAGKF-FYHSALRWFPA-YGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAM 187 (321)
Q Consensus 110 ~~ss~lI~~~~~~~~~~iLID~G~~-~~~~l~~~l~~-~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~ 187 (321)
..+|++|+ + ++.+|||+|.+ ....+.+.+++ .+..+|++|++||.|.||++|+..+.+. .++++||+++
T Consensus 35 ~~n~~li~----~-~~~iliD~g~~~~~~~~~~~l~~~~~~~~i~~iiiTH~H~DH~gg~~~l~~~----~~~~~v~~~~ 105 (398)
T 1ycg_A 35 TYNAYLIV----D-DKTALVDTVYEPFKEELIAKLKQIKDPVKLDYLVVNHTESDHAGAFPAIMEL----CPDAHVLCTQ 105 (398)
T ss_dssp EECCEEEC----S-SSCEEECCCCGGGHHHHHHHHHHHCSSCCCSEEEESCCSHHHHTTHHHHHHH----CTTCEEEECH
T ss_pred eEEEEEEE----C-CCEEEEeCCCcccHHHHHHHHHHhcCcccCCEEEeCCCCcchhhhHHHHHHH----CCCCEEEEcH
Confidence 35689998 3 46999999986 23445555544 3567999999999999999999998765 3578999999
Q ss_pred hhHHHHHhhccccccccCCCCCCCccceeeEEeC-CceEEECCEEEEEEEec--cCCCceEEEEEEc--cEEEeCCCC
Q 020812 188 RDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPVW--HGAGYRSLGFRFG--NICYISDVS 260 (321)
Q Consensus 188 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~p~~--H~~g~~s~g~~i~--~i~ysGDt~ 260 (321)
.+.+.+.+.+.. + ......++ ++.+.+++.+++.+++. |++| ++++.+. +++|+||+.
T Consensus 106 ~~~~~l~~~~~~--------~-----~~~~~~~~~g~~~~~g~~~~~~~~~p~gH~~~--~~~~~~~~~~~lf~GD~~ 168 (398)
T 1ycg_A 106 RAFDSLKAHYSH--------I-----DFNYTIVKTGTSVSLGKRSLTFIEAPMLHWPD--SMFTYVPEEALLLPNDAF 168 (398)
T ss_dssp HHHHHHHHHTCS--------C-----CCEEEECCTTCEEECSSCEEEEEECTTSSSTT--CEEEEETTTTEEEEETTT
T ss_pred HHHHHHHHHhCC--------C-----CcceEEeCCCCEEeeCCcEEEEEeCCCCCCCC--cEEEEECCCcEEEecccc
Confidence 988877664210 0 11334444 67889999888877665 8885 4677774 999999994
No 58
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=99.54 E-value=7.5e-14 Score=132.03 Aligned_cols=125 Identities=17% Similarity=0.204 Sum_probs=93.9
Q ss_pred cEEEEEecCCCCCceEEEecCCC-chHHHHhhccc-CCCCCccEEEecCCchhhhcChHHHHHhhccccccccEEechhh
Q 020812 112 TSILIRYPGPSGRRNILIDAGKF-FYHSALRWFPA-YGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRD 189 (321)
Q Consensus 112 ss~lI~~~~~~~~~~iLID~G~~-~~~~l~~~l~~-~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~~ 189 (321)
+||||. ++++.+|||+|.. ...++++.+++ .++++|++|++||.|+||++|++.+++.+ .++++|++++..
T Consensus 53 NsYLI~----~~~~~vLIDtg~~~~~~~~l~~l~~~i~~~~IdyIi~TH~h~DH~G~l~~l~~~~---~~~~~v~~s~~~ 125 (410)
T 4dik_A 53 NAYLVK----LNGANVLIDGWKGNYAKEFIDALSKIVDPKEITHIIVNHTEPDASGSLPATLKTI---GHDVEIIASNFG 125 (410)
T ss_dssp EEEEEE----CSSCEEEECCCCGGGHHHHHHHHTTTSCGGGCCEEECSCCCHHHHTTHHHHHHHH---CSCCEEEECHHH
T ss_pred EEEEEE----ECCeEEEEeCCCcchHHHHHHHHHHhcCcccCCEEEeCcCCcchhhhHHHHHHHc---CCCCEEEeCHHH
Confidence 689998 5788999999975 34556665555 35678999999999999999999988754 357899999988
Q ss_pred HHHHHhhccccccccCCCCCCCccceeeEEeC-CceEEECCEEEEEE--EeccCCCceEEEEEEccEEEeCCCC
Q 020812 190 FEVMKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPL--PVWHGAGYRSLGFRFGNICYISDVS 260 (321)
Q Consensus 190 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~--p~~H~~g~~s~g~~i~~i~ysGDt~ 260 (321)
...+...+.. ..+..++ ++.+.+|+.+++.+ |..|+++ ++.+..++++|+||..
T Consensus 126 ~~~l~~~~~~---------------~~~~~v~dGd~l~lG~~~L~~i~tPg~H~p~--~~~~y~~~iLFsgD~f 182 (410)
T 4dik_A 126 KRLLEGFYGI---------------KDVTVVKDGEEREIGGKKFKFVMTPWLHWPD--TMVTYLDGILFSCDVG 182 (410)
T ss_dssp HHHHHHHHCC---------------CCEEECCTTCEEEETTEEEEEEECTTSSSTT--CEEEEETTEEEEETTT
T ss_pred HHHHHhhcCc---------------cceeEecCCCEEeecceEEEEecCCCCCCCC--CeeEEeCCceEccccc
Confidence 8877654221 0233444 78999999777665 4458885 3555568999999973
No 59
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ...
Probab=99.53 E-value=2e-14 Score=125.07 Aligned_cols=125 Identities=19% Similarity=0.261 Sum_probs=89.9
Q ss_pred cccEEEEEecCCCCCceEEEecCCCc--hHHHHhhcccCCCCCccEEEecCCchhhhcChHHHHHhhccccccccEEech
Q 020812 110 LNTSILIRYPGPSGRRNILIDAGKFF--YHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAM 187 (321)
Q Consensus 110 ~~ss~lI~~~~~~~~~~iLID~G~~~--~~~l~~~l~~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~ 187 (321)
..+|++|+ ++++.+|||||.+. ...+.+.+++....+|++|++||.|.||++|+..+.+. +++||+++
T Consensus 40 ~~n~~li~----~~~~~iliD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~------~~~v~~~~ 109 (227)
T 1mqo_A 40 PSNGLVLN----TSKGLVLVDSSWDDKLTKELIEMVEKKFQKRVTDVIITHAHADRIGGIKTLKER------GIKAHSTA 109 (227)
T ss_dssp EEEEEEEE----ETTEEEEESCCSSHHHHHHHHHHHHHHHTSCEEEEECCCCSHHHHTTHHHHHHH------TCEEECBH
T ss_pred cceEEEEE----eCCeEEEEECCCChHHHHHHHHHHHHhcCCCceEEEeCCCCchhccchHHHhhC------CcEEEecc
Confidence 35789999 47789999999875 24455555444356899999999999999999988763 58899998
Q ss_pred hhHHHHHhhccccccccCCCCCCCccceeeEEe-CCceEEECCEEEEEE-E-eccCCCceEEEEEEc--cEEEeCCCCC
Q 020812 188 RDFEVMKKTHYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQDLKITPL-P-VWHGAGYRSLGFRFG--NICYISDVSE 261 (321)
Q Consensus 188 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~-p-~~H~~g~~s~g~~i~--~i~ysGDt~~ 261 (321)
.+.+.+... .+ . . ....+ +++.+.+++.+++.+ + ..|++| +++|.+. +++|+||+..
T Consensus 110 ~~~~~~~~~-~~--~---------~---~~~~~~~~~~~~~g~~~i~~~~~~pgHt~g--~~~~~~~~~~~lf~GD~~~ 171 (227)
T 1mqo_A 110 LTAELAKKN-GY--E---------E---PLGDLQTVTNLKFGNMKVETFYPGKGHTED--NIVVWLPQYNILVGGCLVK 171 (227)
T ss_dssp HHHHHHHHT-TC--C---------C---CCCCBCSEEEEEETTEEEEEECCCCSSSSS--CCEEEETTTTEEEEETTSC
T ss_pred chHHHHHhc-CC--C---------C---CccccCCCCeeeECCEEEEEEecCCCCCCC--CEEEEECCCCEEEEeeeee
Confidence 887766542 10 0 0 01112 245788899888875 2 349985 4777775 9999999864
No 60
>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=99.52 E-value=8.9e-15 Score=128.66 Aligned_cols=133 Identities=17% Similarity=0.270 Sum_probs=91.0
Q ss_pred ccccEEEEEecCCCCCceEEEecCCC--chHHHHhhcccC-CCCCccEEEecCCchhhhcChHHHHHhhccccccccEEe
Q 020812 109 RLNTSILIRYPGPSGRRNILIDAGKF--FYHSALRWFPAY-GIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYV 185 (321)
Q Consensus 109 r~~ss~lI~~~~~~~~~~iLID~G~~--~~~~l~~~l~~~-~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~ 185 (321)
...+||+|+ ++++.+|||||.+ ....+.+.+++. +. +|++|++||.|.||++|+..+.+. +++||+
T Consensus 46 ~~~n~~li~----~~~~~iLID~G~~~~~~~~l~~~l~~~~~~-~i~~vi~TH~H~DH~gg~~~l~~~------~~~v~~ 114 (243)
T 4hl2_A 46 VASNGLIVR----DGGRVLVVDTAWTDDQTAQILNWIKQEINL-PVALAVVTHAHQDKMGGMDALHAA------GIATYA 114 (243)
T ss_dssp EEEEEEEEE----ETTEEEEESCCSSHHHHHHHHHHHHHHTCC-CEEEEEECSSSHHHHTTHHHHHHT------TCEEEE
T ss_pred ccceEEEEE----ECCcEEEEECCCCCccHHHHHHHHHHhhCC-CeeEEEECCCCccccCCHHHHHhC------CCeEEE
Confidence 346799999 4778999999964 345566666655 54 799999999999999999998762 689999
Q ss_pred chhhHHHHHhhccccccccCCCCCCCccceeeEEeCCceEEECCEEEEE-EEeccCCCceEEEEEEc--cEEEeCCCCC
Q 020812 186 AMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITP-LPVWHGAGYRSLGFRFG--NICYISDVSE 261 (321)
Q Consensus 186 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~p~~H~~g~~s~g~~i~--~i~ysGDt~~ 261 (321)
++.+.+.+........... . . . .......+++.+.++++++.. .|+ |++| +++|.+. +++|+||+..
T Consensus 115 ~~~~~~~~~~~~~~~~~~~--~-~--~-~~~~~~~~g~~~~~g~~~v~~~~pG-Ht~g--~~~~~~~~~~~lf~GD~~~ 184 (243)
T 4hl2_A 115 NALSNQLAPQEGMVAAQHS--L-T--F-AANGWVEPATAPNFGPLKVFYPGPG-HTSD--NITVGIDGTDIAFGGCLIK 184 (243)
T ss_dssp EHHHHHHGGGTTCCCCSEE--E-C--B-CTTSBBCGGGSTTCTTEEEECCCSS-SSTT--CCEEEETTTTEEECTTTCC
T ss_pred CHHHHHHHhcccccccccc--c-c--c-ccceEecCCCeEEECCEEEEeCCCC-CCcC--CEEEEEcCCCEEEEcceee
Confidence 9988877654321110000 0 0 0 001111235677888988842 343 9986 4777774 9999999865
No 61
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.52 E-value=4.9e-14 Score=136.04 Aligned_cols=125 Identities=18% Similarity=0.223 Sum_probs=88.8
Q ss_pred ccEEEEEecCCCCCceEEEecCCCchHHHHhhcccCCCCCccEEEecCCchhhhcChHHHHHhhccccccccEEechhhH
Q 020812 111 NTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDF 190 (321)
Q Consensus 111 ~ss~lI~~~~~~~~~~iLID~G~~~~~~l~~~l~~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~~~ 190 (321)
++||+|... ++++.+|||+|.+. ..+.+.+++.++ +|++|++||.|.||++|+..+.+.. +++||+++...
T Consensus 16 ~n~yli~~~--~~~~~ilID~g~~~-~~~~~~l~~~~~-~i~~Il~TH~H~DH~gg~~~l~~~~-----~~~i~~~~~~~ 86 (474)
T 3tp9_A 16 HASYLVGCQ--ETGEACVIDPARDV-EPYLLTAKREGL-RIVAALETHIHADFVSGAREMADRA-----GAAICVSDEGP 86 (474)
T ss_dssp EEEEEEEET--TTCEEEEESCCSCC-HHHHHHHHHHTC-EEEEEECSSCCSSSCCCHHHHHHHH-----CCEEEEECCSC
T ss_pred eEEEEEEEC--CCCEEEEEcCCCCh-HHHHHHHHHcCC-eeEEEEcCcCchhhhCCHHHHHHHH-----CCcEEEcCcch
Confidence 468999310 47789999999874 456666666666 7999999999999999999998753 68999987764
Q ss_pred HHHHhhccccccccCCCCCCCccceeeEEe-CCceEEECCEEEEEEEec-cCCCceEEEEEEc---------cEEEeCCC
Q 020812 191 EVMKKTHYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQDLKITPLPVW-HGAGYRSLGFRFG---------NICYISDV 259 (321)
Q Consensus 191 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~p~~-H~~g~~s~g~~i~---------~i~ysGDt 259 (321)
..+...+ ........+ +++.+.+++++++.+... |++| +++|.+. +++|+||+
T Consensus 87 ~~~~~~~--------------~~~~~~~~~~~g~~~~~g~~~i~~i~tPGHt~g--~~~~~~~~~~~~~~~~~~lftGD~ 150 (474)
T 3tp9_A 87 PEWKSEY--------------VKAYPHRLLKDGDELHFGNVRIVVMHTPGHTPE--HVSYLLYDGKTSPDVPMALFSGDF 150 (474)
T ss_dssp GGGCCGG--------------GGGSSEEEECTTCEEEETTEEEEEEECCSSSSS--CEEEEEEETTTEEEEEEEEEEETS
T ss_pred hhhcccc--------------cccccceECCCCCEEEECCEEEEEEECCCCCCC--CEEEEEecCCCCCCCceEEEeCCc
Confidence 3321110 011122333 468899999888766553 8885 4777773 49999999
Q ss_pred C
Q 020812 260 S 260 (321)
Q Consensus 260 ~ 260 (321)
.
T Consensus 151 l 151 (474)
T 3tp9_A 151 V 151 (474)
T ss_dssp E
T ss_pred c
Confidence 5
No 62
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A
Probab=99.51 E-value=3.5e-14 Score=123.78 Aligned_cols=123 Identities=20% Similarity=0.292 Sum_probs=87.1
Q ss_pred cccEEEEEecCCCCCceEEEecCCCc--hHHHHhhcccCCCCCccEEEecCCchhhhcChHHHHHhhccccccccEEech
Q 020812 110 LNTSILIRYPGPSGRRNILIDAGKFF--YHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAM 187 (321)
Q Consensus 110 ~~ss~lI~~~~~~~~~~iLID~G~~~--~~~l~~~l~~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~ 187 (321)
..+|++|+ ++++.+|||+|.+. ...+.+.+++.+. +|++|++||.|.||++|+..+.+. +++||+++
T Consensus 32 ~~n~~li~----~~~~~iliD~g~~~~~~~~~~~~l~~~g~-~i~~ii~TH~H~DH~gg~~~l~~~------~~~v~~~~ 100 (228)
T 1jjt_A 32 PKHGLVVL----VNAEAYLIDTPFTAKDTEKLVTWFVERGY-KIKGSISSHFHSDSTGGIEWLNSR------SIPTYASE 100 (228)
T ss_dssp EEEEEEEE----ETTEEEEESCCSSHHHHHHHHHHHHTTTC-EEEEEECSSSSHHHHTTHHHHHHT------TCCEEEEH
T ss_pred cceEEEEE----ECCcEEEEeCCCChhhHHHHHHHHHHcCC-CeeEEEeCCCChhhhccHHHHHhC------CCEEEECh
Confidence 46799999 46789999999863 3456666666665 899999999999999999988752 68999999
Q ss_pred hhHHHHHhhccccccccCCCCCCCccceeeEEeCCceEEECC--EEEE-EEEeccCCCceEEEEEEc--cEEEeCCCCC
Q 020812 188 RDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQD--LKIT-PLPVWHGAGYRSLGFRFG--NICYISDVSE 261 (321)
Q Consensus 188 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~-~~p~~H~~g~~s~g~~i~--~i~ysGDt~~ 261 (321)
.+.+.+....... +. ..++++.+.+++ +++. ..|+ |++|+ ++|.+. +++|+||+..
T Consensus 101 ~~~~~~~~~~~~~------------~~---~~~~g~~~~l~~~~i~~~~~~pG-Ht~g~--~~~~~~~~~~lf~GD~~~ 161 (228)
T 1jjt_A 101 LTNELLKKDGKVQ------------AT---NSFSGVNYWLVKNKIEVFYPGPG-HTPDN--VVVWLPERKILFGGCFIK 161 (228)
T ss_dssp HHHHHHHHTTCCC------------CS---EEECSSCCEEETTTEEEECCCCS-SSTTC--CEEEETTTTEEEEETTCC
T ss_pred HHHHHHHhcCCcC------------cc---ccccCcceEecCceEEEEecCCC-CCCCc--EEEEECCCcEEEEecccc
Confidence 9888776531100 00 112233444544 5554 4565 99964 677774 9999999864
No 63
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A
Probab=99.51 E-value=4.7e-14 Score=122.34 Aligned_cols=135 Identities=16% Similarity=0.154 Sum_probs=88.7
Q ss_pred ccEEEEEecCCCCCceEEEecCCC--chHHHHhhcccCCCCCccEEEecCCchhhhcChHHHHHhhccccccccEEechh
Q 020812 111 NTSILIRYPGPSGRRNILIDAGKF--FYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMR 188 (321)
Q Consensus 111 ~ss~lI~~~~~~~~~~iLID~G~~--~~~~l~~~l~~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~ 188 (321)
.+|++|+ ++++.+|||+|.+ ....+.+.+++.+..+|++|++||.|.||++|+..+.+ ++++||+++.
T Consensus 23 ~n~~li~----~~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~------~~~~v~~~~~ 92 (227)
T 3iog_A 23 ENSMVYF----GAKGVTVVGATWTPDTARELHKLIKRVSRKPVLEVINTNYHTDRAGGNAYWKS------IGAKVVSTRQ 92 (227)
T ss_dssp EEEEEEE----CSSCEEEESCCSSHHHHHHHHHHHHTTCCSCEEEEECSSSSHHHHTTHHHHHH------TTCEEEEEHH
T ss_pred CcEEEEE----eCCeEEEEECCCChHHHHHHHHHHHHhcCCCeEEEEeCCCchhhcChHHHHhh------CCCeEEECHH
Confidence 5689999 5788999999975 33566666667777899999999999999999998764 3789999999
Q ss_pred hHHHHHhhcccccc----ccCCCCCCCccceeeEEeCCceEEECC--EEEEEE-EeccCCCceEEEEEEc--cEEEeCCC
Q 020812 189 DFEVMKKTHYYLVD----TSGIIPGAAVSELQFNIIDEEPFTVQD--LKITPL-PVWHGAGYRSLGFRFG--NICYISDV 259 (321)
Q Consensus 189 ~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~-p~~H~~g~~s~g~~i~--~i~ysGDt 259 (321)
+.+.+.+....... .....+..... .....+++ .+.+++ +++..+ |+ |++|+ +++.+. +++| ||+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~l~~~~~~~~~~~pG-Ht~g~--~~~~~~~~~~lf-gd~ 166 (227)
T 3iog_A 93 TRDLMKSDWAEIVAFTRKGLPEYPDLPLV-LPNVVHDG-DFTLQEGKVRAFYAGPA-HTPDG--IFVYFPDEQVLY-GGC 166 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTSCCCCCC-CCSEEESS-CEEETTTTEEEECCCCS-SSSSC--CEEEETTTTEEE-CGG
T ss_pred HHHHHHHhhHHHHHHhhcCCCCCCCcccc-CCCEeecC-eEEEcCcEEEEEecCCC-CCCCc--EEEEecCCCEEE-ccc
Confidence 88777643211000 00001110000 11122343 466654 565555 44 99965 667774 8999 886
Q ss_pred CC
Q 020812 260 SE 261 (321)
Q Consensus 260 ~~ 261 (321)
..
T Consensus 167 l~ 168 (227)
T 3iog_A 167 IL 168 (227)
T ss_dssp GS
T ss_pred cc
Confidence 43
No 64
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=99.47 E-value=1.7e-13 Score=120.46 Aligned_cols=139 Identities=9% Similarity=0.093 Sum_probs=88.2
Q ss_pred ccEEEEEecCCCCCceEEEecCCCc--hHHHHhhcccC-CCCCccEEEecCCchhhhcChHHHHHhhccccccccEEech
Q 020812 111 NTSILIRYPGPSGRRNILIDAGKFF--YHSALRWFPAY-GIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAM 187 (321)
Q Consensus 111 ~ss~lI~~~~~~~~~~iLID~G~~~--~~~l~~~l~~~-~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~ 187 (321)
.+|++|+. .++..+|||+|.+. ...+.+.+++. +...+ +|++||.|.||++|+..+.+. +++||+++
T Consensus 30 ~n~~li~~---~~~~~iLiD~G~~~~~~~~l~~~l~~~~~~~~~-~vi~TH~H~DH~gg~~~l~~~------~~~v~~~~ 99 (246)
T 2fhx_A 30 SNVLVAKM---LDGTVVIVSSPFENLGTQTLMDWVAKTMKPKKV-VAINTHFHLDGTGGNEIYKKM------GAETWSSD 99 (246)
T ss_dssp EEEEEEEC---TTSEEEEESCCSSHHHHHHHHHHHHHHHCCSEE-EEECCSSSHHHHTTHHHHHHT------TCEEEEEH
T ss_pred CCEEEEEe---CCCeEEEEeCCCCHHHHHHHHHHHHHhcCCCcE-EEEeCCCCccccChHHHHhhc------CCEEEEcH
Confidence 46889983 23468999999862 34455555443 55555 799999999999999888651 68999999
Q ss_pred hhHHHHHhhccc-------cccccC---CC-CCCCccceeeEEe-CCceEEECCEEEEEEE-e-ccCCCceEEEEEEc--
Q 020812 188 RDFEVMKKTHYY-------LVDTSG---II-PGAAVSELQFNII-DEEPFTVQDLKITPLP-V-WHGAGYRSLGFRFG-- 251 (321)
Q Consensus 188 ~~~~~l~~~~~~-------~~~~~~---~~-~~~~~~~~~~~~~-~~~~~~~~~~~v~~~p-~-~H~~g~~s~g~~i~-- 251 (321)
.+.+.+...... .+.... .. .........+..+ +++.+++++.+++.+. . .|++|+ ++|.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~g~~~i~~~~~~pGHt~g~--~~~~~~~~ 177 (246)
T 2fhx_A 100 LTKQLRLEENKKDRIKAAEFYKNEDLKRRILSSHPVPADNVFDLKQGKVFSFSNELVEVSFPGPAHSPDN--VVVYFPKK 177 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTCCCCCSEEECTTTCEEEEETTEEEEEECCCCSSSTTC--CEEEETTT
T ss_pred HHHHHHHhcchhhhHHHHhhhccccchhhhcccccCCCCceeecCCCCEEEECCEEEEEEeCCCCCCCCC--EEEEEcCC
Confidence 888776542110 000000 00 0000011122233 3578889998887762 2 499964 677774
Q ss_pred cEEEeCCCCC
Q 020812 252 NICYISDVSE 261 (321)
Q Consensus 252 ~i~ysGDt~~ 261 (321)
+++|+||+..
T Consensus 178 ~~lf~GD~~~ 187 (246)
T 2fhx_A 178 KLLFGGCMIK 187 (246)
T ss_dssp TEEEEETTCC
T ss_pred CEEEECCEec
Confidence 9999999865
No 65
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.46 E-value=2e-13 Score=131.45 Aligned_cols=126 Identities=21% Similarity=0.232 Sum_probs=88.4
Q ss_pred ccEEEEEecCCCCCceEEEecCCCchHHHHhhcccCCCCCccEEEecCCchhhhcChHHHHHhhccccccccEEechhhH
Q 020812 111 NTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDF 190 (321)
Q Consensus 111 ~ss~lI~~~~~~~~~~iLID~G~~~~~~l~~~l~~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~~~ 190 (321)
++||+|... ++++.+|||+|.+. ..+.+.+++.+. +|++|++||.|.||++|+..+.+.+ +++||+++...
T Consensus 37 ~nsyli~~~--~~~~~vlID~g~~~-~~~~~~l~~~g~-~i~~Il~TH~H~DH~gg~~~l~~~~-----~a~v~~~~~~~ 107 (466)
T 3r2u_A 37 QASYLIGCQ--KTGEAMIIDPIRDL-SSYIRVADEEGL-TITHAAETHIHADFASGIRDVAIKL-----NANIYVSGESD 107 (466)
T ss_dssp EEEEEEEET--TTCEEEEESCCSCC-HHHHHHHHHHTC-EEEEEECSSCCSSSCCCHHHHHHHH-----CCEEEEECCSC
T ss_pred ceEEEEEeC--CCCEEEEEcCCCCH-HHHHHHHHHCCC-eeeEEEECCCChhhhccHHHHHHhh-----CCeEEECcchh
Confidence 468999521 46789999999765 445555666665 6999999999999999999998753 68999997643
Q ss_pred HHHHhhccccccccCCCCCCCccceeeEEeCCceEEECCEEEEEEEec-cCCCceEEEEEEc--c-------EEEeCCCC
Q 020812 191 EVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVW-HGAGYRSLGFRFG--N-------ICYISDVS 260 (321)
Q Consensus 191 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~-H~~g~~s~g~~i~--~-------i~ysGDt~ 260 (321)
..+.. . . .+.......+++.+.+++++++.+.+. |++| +++|.+. + ++|+||+.
T Consensus 108 ~~~~~------~------~--~~~~~~~~~~g~~l~~g~~~l~vi~tPGHT~g--~~~~~~~~~~~~~~~~~~lftGD~l 171 (466)
T 3r2u_A 108 DTLGY------K------N--MPNHTHFVQHNDDIYVGNIKLKVLHTPGHTPE--SISFLLTDEGAGAQVPMGLFSGDFI 171 (466)
T ss_dssp TTTSC------C------S--CCTTCEEECTTCEEEETTEEEEEEECCSSSTT--CEEEEEECGGGTCCSCCEEEEETTB
T ss_pred hhhcc------c------c--CCCCCEEeCCCCEEEECCEEEEEEECCCCCCC--CEEEEEcCCCccCCCceEEEECCcc
Confidence 22110 0 0 011122233478899999888876554 8886 4777775 2 99999996
Q ss_pred C
Q 020812 261 E 261 (321)
Q Consensus 261 ~ 261 (321)
+
T Consensus 172 f 172 (466)
T 3r2u_A 172 F 172 (466)
T ss_dssp C
T ss_pred c
Confidence 4
No 66
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=99.46 E-value=1.8e-13 Score=129.59 Aligned_cols=127 Identities=17% Similarity=0.127 Sum_probs=90.7
Q ss_pred cccEEEEEecCCCCCceEEEecCCCc-hHHHHhhccc-CCCCCccEEEecCCchhhhcChHHHHHhhccccccccEEech
Q 020812 110 LNTSILIRYPGPSGRRNILIDAGKFF-YHSALRWFPA-YGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAM 187 (321)
Q Consensus 110 ~~ss~lI~~~~~~~~~~iLID~G~~~-~~~l~~~l~~-~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~ 187 (321)
..+|++|+ + ++.+|||+|... ...+.+.+++ .++.+|++|++||.|.||++|+..+.+. .++++||+++
T Consensus 40 ~~n~~li~----~-~~~iLID~G~~~~~~~~~~~l~~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~----~~~~~v~~~~ 110 (414)
T 2q9u_A 40 SYNSYFID----D-ECPTVIDSVKYPFAEEWLSRIAACCPLDKIKYVVMNHAEGDHASSLKDHYHK----FTNATFVCTK 110 (414)
T ss_dssp EECCEEEC----S-SSCEEECCCCGGGHHHHHHHHHHHSCGGGCCEEECSCCSGGGTTTHHHHGGG----STTCEEEECH
T ss_pred ceeEEEEE----C-CCEEEEeCCCcccHHHHHHHHHHhcCcccCCEEEeCCCCcchhcCHHHHHHH----CCCCEEEECH
Confidence 35689998 3 679999999853 3444444443 3457899999999999999999988764 3578999999
Q ss_pred hhHHHHHhhccccccccCCCCCCCccceeeEEeC-CceEEECCEEEEEEEec--cCCCceEEEEEEc--cEEEeCCCC
Q 020812 188 RDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPVW--HGAGYRSLGFRFG--NICYISDVS 260 (321)
Q Consensus 188 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~p~~--H~~g~~s~g~~i~--~i~ysGDt~ 260 (321)
.+.+.+...+.. + ......++ ++.+.+++.+++.++.. |++|+ +++... +++|+||+.
T Consensus 111 ~~~~~~~~~~~~--------~-----~~~~~~~~~g~~~~lg~~~~~~~~~p~gHt~~~--~~~~~~~~~~lf~GD~~ 173 (414)
T 2q9u_A 111 KCQEHLKILYGM--------E-----KATWLIVDDKYTLKIGKRTLKFIPVPLLHWPDS--TFTYCPEDKILFSNDGF 173 (414)
T ss_dssp HHHHHHHHHHCC--------T-----TCCEEECCTTCCEECSSCEEEEEECTTSSSTTC--EEEEETTTTEEEEETTT
T ss_pred HHHHHHHHHhCC--------C-----CCeeEEeCCCCEEEECCeEEEEEeCCCCCCCCc--eEEEECCCeEEEEcccc
Confidence 988877653210 0 01233443 67889998777766654 99864 555553 999999974
No 67
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=99.45 E-value=6.9e-14 Score=125.18 Aligned_cols=132 Identities=16% Similarity=0.231 Sum_probs=83.8
Q ss_pred ccEEEEEecCCCCCceEEEecCCCc--hHHHHhhcccCCCCCccEEEecCCchhhhcChHHHHHhhccccccccEEechh
Q 020812 111 NTSILIRYPGPSGRRNILIDAGKFF--YHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMR 188 (321)
Q Consensus 111 ~ss~lI~~~~~~~~~~iLID~G~~~--~~~l~~~l~~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~ 188 (321)
++||+|. ++++.+|||+|.+. ..++++++++..-..|++|++||.|.||++|+..+.+. .+++|+++.
T Consensus 75 ~N~ylv~----~~~~~ilIDtg~~~~~~~~l~~~i~~~~~~~I~~Ii~TH~H~DH~gg~~~l~~~------~~~v~~~~~ 144 (270)
T 4eyb_A 75 SNGLIVR----DGGRVLVVDTAWTDDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAA------GIATYANAL 144 (270)
T ss_dssp EEEEEEE----ETTEEEEESCCSSHHHHHHHHHHHHHHTCCCEEEEEECSSSHHHHTTHHHHHHT------TCEEEEEHH
T ss_pred eEEEEEE----ECCEEEEEeCCCCHHHHHHHHHHHHHhcCCceEEEEeCCCChhhcCcHHHHHHC------CCeEEECHH
Confidence 5689998 47889999999763 34566655544335799999999999999999998763 689999988
Q ss_pred hHHHHHhhccccccccCCCCCCCccceeeEEeC-CceEEECCEEEEEEEeccCCCceEEEEEEc--cEEEeCCCCC
Q 020812 189 DFEVMKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKITPLPVWHGAGYRSLGFRFG--NICYISDVSE 261 (321)
Q Consensus 189 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~p~~H~~g~~s~g~~i~--~i~ysGDt~~ 261 (321)
+.+.+.+......... ........++ +..+..+++.+......|++|+ +.+.+. +++|+||+..
T Consensus 145 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~g~~~~~~~~pgHT~g~--~~~~~~~~~vLfsGD~l~ 211 (270)
T 4eyb_A 145 SNQLAPQEGMVAAQHS-------LTFAANGWVEPATAPNFGPLKVFYPGPGHTSDN--ITVGIDGTDIAFGGCLIK 211 (270)
T ss_dssp HHHHGGGGTCCCCSEE-------ECBCTTSBBCGGGSTTCTTEEEECCCSSSSSSC--CEEEETTSSEEECTTTCC
T ss_pred HHHHHHhcCccccccc-------cCCCCceeecCceeeecCceeEEecccccCCCC--EEEEecCCcEEEEeCeec
Confidence 8776654321110000 0000000111 2333445555443323488875 455553 9999999854
No 68
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=99.31 E-value=7.5e-12 Score=125.17 Aligned_cols=145 Identities=17% Similarity=0.144 Sum_probs=88.0
Q ss_pred ccEEEEEecCCCCCceEEEecCCCch--HHHHhhccc-CCCCCccEEEecCCchhhhcChHHHHHhhccccccccEEech
Q 020812 111 NTSILIRYPGPSGRRNILIDAGKFFY--HSALRWFPA-YGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAM 187 (321)
Q Consensus 111 ~ss~lI~~~~~~~~~~iLID~G~~~~--~~l~~~l~~-~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~ 187 (321)
.++++|+ +++..+|||+|.+.. ..+++.+.+ .+..+|++|++||.|.||++|+..+.+......++++||+++
T Consensus 123 ~N~ylI~----~~~g~iLIDtG~~~~~a~~~l~~i~~~~~~~~I~~IIlTH~H~DH~GG~~~l~~~~~~~~~~a~V~a~~ 198 (658)
T 2cfu_A 123 ANITFIR----GDSGWIVVDTLTTPATARAAYELVSRELGERPIRTVIYSHAHADHFGGVRGLVEPQQVASGAVQIIAPA 198 (658)
T ss_dssp SCEEEEE----CSSSEEEECCCSSHHHHHHHHHHHHHHHCCCCEEEEECSBSCHHHHTTGGGTCCHHHHHTTSSEEEEET
T ss_pred eEEEEEE----ECCEEEEEECCCCHHHHHHHHHHHHhhCCCCCceEEEECCCChhhhCCHHHHHhhhhccCCCCEEEEch
Confidence 5689999 577899999998742 233443332 445789999999999999999988754210013578999999
Q ss_pred hhHHHHHh-----------h----ccccccccC---CC--------CCC-CccceeeEEe-CCceEEECCEEEEEEEec-
Q 020812 188 RDFEVMKK-----------T----HYYLVDTSG---II--------PGA-AVSELQFNII-DEEPFTVQDLKITPLPVW- 238 (321)
Q Consensus 188 ~~~~~l~~-----------~----~~~~~~~~~---~~--------~~~-~~~~~~~~~~-~~~~~~~~~~~v~~~p~~- 238 (321)
...+.+.. . +...+.... .. .+. ........+. +++.+.++|.+++.+...
T Consensus 199 ~~~~~~~~e~~~~g~~~~~r~~~~~g~~lp~~~~~~v~~~l~~~~~~g~~~~~~p~~~~~~dG~~l~lgg~~l~vi~tPG 278 (658)
T 2cfu_A 199 GFMEAAIKENVLAGNAMMRRATYQYGTQLPKGPQGQVDMAIGKGLARGPLSLLAPTRLIEGEGEDLVLDGVPFTFQNTPG 278 (658)
T ss_dssp THHHHHC---CTTHHHHHHHHHHHTTTTSCBSTTSBCCCSSSSCCCCSCCCCCCCSEEECTTEEEEEETTEEEEEEECTT
T ss_pred hHHHHHhhhhhhhhhHHHHHHHHHhccCCChhhhhhhhhcccccccCCCccCCCCcEEEecCceEEEECCEEEEEEeCCC
Confidence 87665421 0 110000000 00 000 0001122222 457788999766654332
Q ss_pred c-CCCceEEEEEEc--cEEEeCCCCC
Q 020812 239 H-GAGYRSLGFRFG--NICYISDVSE 261 (321)
Q Consensus 239 H-~~g~~s~g~~i~--~i~ysGDt~~ 261 (321)
| ++|+ ++|.+. +++|+||+..
T Consensus 279 HhTpg~--i~~~~p~~~vLftGD~v~ 302 (658)
T 2cfu_A 279 TESPAE--MNIWLPRQKALLMAENVV 302 (658)
T ss_dssp SSSSSB--EEEEETTTTEEECTTTSC
T ss_pred CCCCCc--EEEEECCCCEEEEecccc
Confidence 5 8864 777775 8999999854
No 69
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12
Probab=99.30 E-value=4.8e-12 Score=108.05 Aligned_cols=119 Identities=17% Similarity=0.159 Sum_probs=83.3
Q ss_pred ccccEEEEEecCCCCCceEEEecCCCchHHHHhhcccCCCCCccEEEecCCchhhhcChHHHHHhhccccccccEEechh
Q 020812 109 RLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMR 188 (321)
Q Consensus 109 r~~ss~lI~~~~~~~~~~iLID~G~~~~~~l~~~l~~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~ 188 (321)
...++++|+ ++++.+|||+|... ..+.+.+++.+ +|++|++||. ||++|+..+.+.+ +++||+++.
T Consensus 22 ~~~n~~li~----~~~~~iliD~g~~~-~~~~~~l~~~g--~i~~ii~TH~--DH~gg~~~~~~~~-----~a~v~~~~~ 87 (201)
T 2p97_A 22 IDFNGFAWI----RPEGNILIDPVALS-NHDWKHLESLG--GVVWIVLTNS--DHVRSAKEIADQT-----YTKIAGPVA 87 (201)
T ss_dssp EEEEEEEEC----CTTCCEEESCCCCC-HHHHHHHHHTT--CCSEEECSSG--GGCTTHHHHHHHS-----CCEEEEEGG
T ss_pred cceeEEEEE----eCCeeEEEECCCCc-HHHHHHHHhcC--CCCEEEECCc--hhhhhHHHHHHhc-----CCEEEEcHh
Confidence 346799999 46789999999643 24455555565 8999999999 9999999887642 489999987
Q ss_pred hHHHHHhhccccccccCCCCCCCccceeeEEeCCceEEECCEEEEEEEeccCCCceEEEEEEc-cEEEeCCCCCC
Q 020812 189 DFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAGYRSLGFRFG-NICYISDVSEI 262 (321)
Q Consensus 189 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~H~~g~~s~g~~i~-~i~ysGDt~~~ 262 (321)
+.+.+... . .....+++.+. .++++..+|..|++| +++|.++ +++|+||+...
T Consensus 88 ~~~~~~~~----------------~--~~~~~~g~~~~-~~~~~~~~p~gHt~g--~~~~~~~~~~lf~GD~~~~ 141 (201)
T 2p97_A 88 EKENFPIY----------------C--DRWLSDGDELV-PGLKVMELQGSKTPG--ELALLLEETTLITGDLVRA 141 (201)
T ss_dssp GTTSCSSC----------------C--SEEECTTCBSS-TTEEEEEECSSSSTT--EEEEEETTTEEEECSSEEB
T ss_pred Hhhhhccc----------------C--ceecCCCCEEc-ceEEEEECCCCCCCC--cEEEEEcCCEEEECccccc
Confidence 65432110 0 11112233332 378888888559995 5778887 79999998654
No 70
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=98.62 E-value=1.8e-11 Score=122.03 Aligned_cols=144 Identities=16% Similarity=0.158 Sum_probs=86.0
Q ss_pred ccEEEEEecCCCCCceEEEecCCCc--hHHHHhhccc-CCCCCccEEEecCCchhhhcChHHHHHhhccccccccEEech
Q 020812 111 NTSILIRYPGPSGRRNILIDAGKFF--YHSALRWFPA-YGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAM 187 (321)
Q Consensus 111 ~ss~lI~~~~~~~~~~iLID~G~~~--~~~l~~~l~~-~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~ 187 (321)
.+|++|+ +++..+|||+|... ..++++.+.+ .+..+|++|++||.|.||++|+..+.+......++++||+++
T Consensus 133 ~N~~lI~----~~~~~iLIDtG~~~~~a~~~l~~i~~~~~~~~I~~IilTH~H~DH~gG~~~l~~~~~~~~~~a~I~a~~ 208 (668)
T 2yhe_A 133 ANMTIIE----GDSGLVLIDTLTTAETARAALDLYFQHRPKKPIVAVVYSHSHIDHFGGARGIIDEADVKAGKVKVFAPS 208 (668)
Confidence 5788888 46789999999764 2345554444 345789999999999999999998875211112468999998
Q ss_pred hhHHHH--Hh---------hcccccc----ccC--CC-----C-----C-CCccceeeEEe-CCceEEECCEEEEE--EE
Q 020812 188 RDFEVM--KK---------THYYLVD----TSG--II-----P-----G-AAVSELQFNII-DEEPFTVQDLKITP--LP 236 (321)
Q Consensus 188 ~~~~~l--~~---------~~~~~~~----~~~--~~-----~-----~-~~~~~~~~~~~-~~~~~~~~~~~v~~--~p 236 (321)
...+.. .. ...+.+. ... .. . + ......+...+ +++.+.++|.+++. +|
T Consensus 209 ~~~e~~~~e~~~~g~~~~~r~~~~~G~~lp~~~~~~~~~~l~~~~~~~~~~~~~~P~~~~~~dg~~l~lgg~~l~vi~tP 288 (668)
T 2yhe_A 209 GFMEHAVSENILAGTAMARRGQYQSGVMVPRGAQAQVDSGLFKTTATNATNTLVAPNVLIEKPYERHTVDGVELEFQLTL 288 (668)
Confidence 863321 11 0001110 000 00 0 0 00000122223 35677888766554 55
Q ss_pred eccCCCceEEEEEEc--cEEEeCCCC
Q 020812 237 VWHGAGYRSLGFRFG--NICYISDVS 260 (321)
Q Consensus 237 ~~H~~g~~s~g~~i~--~i~ysGDt~ 260 (321)
+.|++|+ +++.+. +++|+||+.
T Consensus 289 G~Htpg~--i~~~~p~~~vLftGD~~ 312 (668)
T 2yhe_A 289 GSEAPSD--MNIYLPQFKVLNTADNA 312 (668)
Confidence 5588864 566664 899999984
No 71
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=98.72 E-value=1.9e-08 Score=89.39 Aligned_cols=62 Identities=31% Similarity=0.405 Sum_probs=49.0
Q ss_pred ccEEEEEecCCCCCceEEEecCCCchHHHHhhcccCCCCCccEEEecCCchhhhcChHHHHHhhccccccccEEechhhH
Q 020812 111 NTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDF 190 (321)
Q Consensus 111 ~ss~lI~~~~~~~~~~iLID~G~~~~~~l~~~l~~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~~~ 190 (321)
+.|++|+ + +|||+|.+. .+.+.+++.++..-++|++||.|.||++|+..+ ++++||+++.++
T Consensus 32 G~s~lie----~----iLiD~G~~~--~l~~~l~~~gi~~~~~IvlTH~H~DH~ggl~~l--------~~~~v~~~~~~~ 93 (267)
T 3h3e_A 32 GFSVLVD----S----VLFDTGKSD--VFLKNARKLGIDLPKDVLISHGHYDHAGGLLYL--------SGKRVWLRKEAL 93 (267)
T ss_dssp SCEEEET----T----EEECCCSSS--HHHHHHHHTTCCCCSEEECSCSCHHHHGGGGGC--------CSCEEEEEGGGG
T ss_pred EeHHeee----e----EEEECCCcH--HHHHHHHHCCcCcCCEEEECCCChhhhCCHHHh--------cCCEEEECHHHH
Confidence 5689998 3 999999974 355556666652129999999999999999876 368999998765
Done!