BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020813
(321 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54FQ8|EI2BG_DICDI Translation initiation factor eIF-2B subunit gamma OS=Dictyostelium
discoideum GN=eif2b3 PE=3 SV=1
Length = 440
Score = 150 bits (378), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 159/292 (54%), Gaps = 20/292 (6%)
Query: 6 PVSGLSEAGSSGAKDKTKKPGRY-NIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVG 64
P + + G + TK+ + + I ++ Q ++ + E+E+D KS+L+
Sbjct: 149 PTPKVEQKGKGATETSTKQDKLFTDYIALEEKSQKIVMMEPATEVEEDLNFNKSLLKYFP 208
Query: 65 QMDIRADLMDAHMYAFNRSVLQEVL-DQKDK---FQSLKQDVLPYLVRSQLKSEILINGA 120
+ I +L D +Y F+R VL ++ DQK+K F +K+ ++PYL+ Q+ +
Sbjct: 209 NVTIYTNLQDTQLYIFSRWVLDLIIEDQKEKYPLFFDIKKHLIPYLLSCQIPNIKRKRAL 268
Query: 121 PQGQQAKENGNDKVSYRILANASTP--SFHELYALGPNGSAPVRRTHKCCVYIASNSKYC 178
P + N N +S + +++ ++P F EL +A +T KC ++ YC
Sbjct: 269 PA---SAFNQNQTLS-QTMSSTTSPFDQFSEL-------NAQKNKTIKCFAHLLKKEGYC 317
Query: 179 VRLNSIQAFMDINRDVI-GEANHLSGYNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQM 237
+ +N+I+ + INRD+ G+ +L S +N I P+A + + T VGP C++G + +
Sbjct: 318 MNVNTIKNYQQINRDIAKGDLQYLPNEPKSEKNFFIDPTANV-TITQVGPQCVIGTSTTL 376
Query: 238 GDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQGSVICSNAQLQ 289
G KCSVK S+IG+HC+IG V++ NS++M+HV I D C I S+IC++ ++
Sbjct: 377 GAKCSVKFSIIGKHCKIGDGVRIENSIIMDHVIIEDRCVINSSIICNDVYIK 428
>sp|P70541|EI2BG_RAT Translation initiation factor eIF-2B subunit gamma OS=Rattus
norvegicus GN=Eif2b3 PE=2 SV=2
Length = 452
Score = 142 bits (357), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 161/312 (51%), Gaps = 22/312 (7%)
Query: 17 GAKDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAH 76
G K K K + + IG+D T + LL +A A+L+++ I+ SIL+ ++ + L+DAH
Sbjct: 144 GQKGKKKTVEQRDFIGVDSTGKRLLFMANEADLDEELVIKGSILQKHPRIHFQTGLVDAH 203
Query: 77 MYAFNRSVLQEVLDQKDKFQSLKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSY 136
+Y + V+ +++ K S++ +++PYLVR Q S + Q Q+ KE K
Sbjct: 204 LYCLKKYVVDFLMENK-SITSIRSELIPYLVRKQFSSA----SSQQRQEDKEEDLKKKEP 258
Query: 137 RILANASTPSFHELYALGPNGSA--PVRRTH---------KCCVYIASNSKYCVRLNSIQ 185
+ L S L P + RR +C V+I C R++++
Sbjct: 259 KSLDIYSFIKKDNTLTLAPYDACWNAFRRDKWEDLSRSQVRCYVHIMKEG-LCSRVSTLG 317
Query: 186 AFMDINRDVIGEANHLSGYNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKR 245
+M+ NR V + L + ++IHPSA++ +K +G ++G +Q+G+K S+KR
Sbjct: 318 LYMEANRQVPKLLSVLC-----PEESMIHPSAQIANKHLIGADSLIGSDTQVGEKSSIKR 372
Query: 246 SVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQGSVICSNAQLQERVALKDCQVGQGYVV 305
SVIG C I V V N ++MN VT+ +G SI GSVIC+NA ++ ++DC +G G +
Sbjct: 373 SVIGSSCVIRDRVTVTNCLLMNSVTVEEGSSIHGSVICNNAVVEAGAEIRDCLIGSGQRI 432
Query: 306 SAGCEYKGESLA 317
A + E +
Sbjct: 433 EAKAKRMNEVIV 444
>sp|Q4R6T3|EI2BG_MACFA Translation initiation factor eIF-2B subunit gamma OS=Macaca
fascicularis GN=EIF2B3 PE=2 SV=1
Length = 452
Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 159/302 (52%), Gaps = 22/302 (7%)
Query: 17 GAKDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAH 76
G K K K + + IG+D T + LL +A A+L+++ I+ SIL+ ++ DL+DAH
Sbjct: 144 GQKGKKKAVEQRDFIGVDSTGKRLLFMANEADLDEELVIKGSILQKYPRIRFHTDLVDAH 203
Query: 77 MYAFNRSVLQEVLDQKDKFQSLKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVS- 135
+Y + V+ + L + S++ +++PYLVR Q S + QGQ+ KE K
Sbjct: 204 LYCLKKYVV-DFLMENGSITSIRSELIPYLVRKQFSSA----SSQQGQEEKEEDLKKKEL 258
Query: 136 -----YRILANASTPSFHELYAL-----GPNGSAPVRRTHKCCVYIASNSKYCVRLNSIQ 185
Y L A+T + A G R +C V+I C R++++
Sbjct: 259 KSLDIYSFLKEANTLNLAPYDACWNACRGDRWEDLPRSQVRCYVHIMKEG-LCSRVSTLG 317
Query: 186 AFMDINRDVIGEANHLSGYNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKR 245
+M+ NR V LS + ++H SA++ SK VG ++G +Q+G+K S+KR
Sbjct: 318 LYMEANRQV---PKLLSA--LCPEEPLVHSSAQIVSKHLVGVDSLIGPETQIGEKSSIKR 372
Query: 246 SVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQGSVICSNAQLQERVALKDCQVGQGYVV 305
SVIG C I V + N ++MN VT+ +G +IQGSVIC+NA +++ +KDC +G G +
Sbjct: 373 SVIGSSCLIKDRVTITNCLLMNSVTVEEGSNIQGSVICNNAVIEKGADIKDCLIGSGQRI 432
Query: 306 SA 307
A
Sbjct: 433 EA 434
>sp|Q9NR50|EI2BG_HUMAN Translation initiation factor eIF-2B subunit gamma OS=Homo sapiens
GN=EIF2B3 PE=1 SV=1
Length = 452
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 157/302 (51%), Gaps = 22/302 (7%)
Query: 17 GAKDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAH 76
G K K K + + IG+D T + LL +A A+L+++ I+ SIL+ ++ L+DAH
Sbjct: 144 GQKGKKKAVEQRDFIGVDSTGKRLLFMANEADLDEELVIKGSILQKHPRIRFHTGLVDAH 203
Query: 77 MYAFNRSVLQEVLDQKDKFQSLKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVS- 135
+Y + ++ + L + S++ +++PYLVR Q S + QGQ+ KE K
Sbjct: 204 LYCLKKYIV-DFLMENGSITSIRSELIPYLVRKQFSSA----SSQQGQEEKEEDLKKKEL 258
Query: 136 -----YRILANASTPSFHELYAL-----GPNGSAPVRRTHKCCVYIASNSKYCVRLNSIQ 185
Y + A+T + A G R +C V+I C R++++
Sbjct: 259 KSLDIYSFIKEANTLNLAPYDACWNACRGDRWEDLSRSQVRCYVHIMKEG-LCSRVSTLG 317
Query: 186 AFMDINRDVIGEANHLSGYNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKR 245
+M+ NR V LS + +H SA++ SK VG ++G +Q+G+K S+KR
Sbjct: 318 LYMEANRQV---PKLLSA--LCPEEPPVHSSAQIVSKHLVGVDSLIGPETQIGEKSSIKR 372
Query: 246 SVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQGSVICSNAQLQERVALKDCQVGQGYVV 305
SVIG C I V + N ++MN VT+ +G +IQGSVIC+NA +++ +KDC +G G +
Sbjct: 373 SVIGSSCLIKDRVTITNCLLMNSVTVEEGSNIQGSVICNNAVIEKGADIKDCLIGSGQRI 432
Query: 306 SA 307
A
Sbjct: 433 EA 434
>sp|A5PJI7|EI2BG_BOVIN Translation initiation factor eIF-2B subunit gamma OS=Bos taurus
GN=EIF2B3 PE=2 SV=1
Length = 452
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 160/302 (52%), Gaps = 22/302 (7%)
Query: 17 GAKDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAH 76
G K K K + + +G+D T + LL +A A+L+++ I+ SIL+ ++ L+DAH
Sbjct: 145 GQKGKKKAVEQRDFVGVDSTGKRLLFMANEADLDEELIIKGSILQKHPRIRFHTGLVDAH 204
Query: 77 MYAFNRSVLQEVLDQKDKFQSLKQDVLPYLVRSQLKSEILINGAPQGQQAKENGN----- 131
+Y + V+ +++ K S++ +++PYLVR Q S + QGQ+ KE
Sbjct: 205 LYCLKKYVVDFLMENK-SITSIRSELIPYLVRKQFSSA----SSQQGQEEKEEDLKKKEL 259
Query: 132 ---DKVSYRILANASTPSFHEL---YALGPNGSAPVRRTHKCCVYIASNSKYCVRLNSIQ 185
D S+ AN T + ++ G + R +C V+I C R++++
Sbjct: 260 KSLDIYSFIKEANTLTLAPYDTCWNACRGDSWEGLSRSQVRCYVHIMKEG-LCSRVSTLG 318
Query: 186 AFMDINRDVIGEANHLSGYNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKR 245
+M+ NR V + L + ++IH SA++ SK VG ++G +Q+G+K S+K
Sbjct: 319 LYMEANRQV----SKLLPV-ICPEESLIHSSAQIVSKHMVGADSLIGPDTQVGEKSSIKH 373
Query: 246 SVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQGSVICSNAQLQERVALKDCQVGQGYVV 305
SVIG C I V V N ++MN VT+ +G +IQ S+IC++A +++ +K+C +G G +
Sbjct: 374 SVIGSSCVIRDRVTVTNCLLMNSVTVEEGSNIQSSIICNDAVIEKGADIKNCLIGSGQRI 433
Query: 306 SA 307
A
Sbjct: 434 EA 435
>sp|P56288|EI2BG_SCHPO Probable translation initiation factor eIF-2B subunit gamma
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tif223 PE=1 SV=2
Length = 458
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 146/292 (50%), Gaps = 34/292 (11%)
Query: 30 IIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVL 89
+IG++ LL+ + A++ D R S+L ++ + +L DAH++ F V+ +++
Sbjct: 195 LIGIEEKTSRLLYAKSSADVGSDFTFRMSLLWKHPRVTLNTNLSDAHIFVFKHWVI-DLI 253
Query: 90 DQKDKFQSLKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHE 149
+K+ S++ D++PYLV+ Q + + +EN I S+P+ +
Sbjct: 254 REKESISSIRGDLIPYLVKCQYQKSFTV---------REN--------IQRFLSSPNNID 296
Query: 150 LYALGPNGSAPVRRTHKCCVYIASNSKYCVRLNSIQAFMDINRDVIGEANHLSGYNFSAQ 209
Y G + + K IA + C R N++ + ++N+ + + +
Sbjct: 297 NYDGGLSS-----QEIKINALIAKDGIICSRANNLPNYFELNKCIA---------KLTPE 342
Query: 210 NNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHV 269
++ + + VG CM+ EG+ + D ++K+S+IG++C IG V V NS++M+++
Sbjct: 343 QRLV--DVTVSERALVGADCMVNEGTTIKDNSNIKKSIIGKNCVIGKGVVVSNSILMDNI 400
Query: 270 TIGDGCSIQGSVICSNAQLQERVALKDCQVGQGYVVSAGCEYKGESLARKEK 321
+ DG ++ ++ S AQ+ + L++C++G + V AG +GE L EK
Sbjct: 401 VVEDGVRLESCIVASGAQIGAKSKLRECEIGVDHRVEAGRIARGERLVDMEK 452
>sp|P32501|EI2BE_YEAST Translation initiation factor eIF-2B subunit epsilon
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=GCD6 PE=1 SV=1
Length = 712
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 74/143 (51%), Gaps = 11/143 (7%)
Query: 169 VYIASNSKYCVRLNSIQAFMDINRDVIG--------EANHLSGYNFSAQNNIIHPSAE-- 218
+Y +Y VR+ S Q + I++D +G ++N +S ++ I+ +
Sbjct: 273 IYAYLTDEYAVRVESWQTYDTISQDFLGRWCYPLVLDSNIQDDQTYSYESRHIYKEKDVV 332
Query: 219 LGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQ 278
L +G +G G+++G+ ++ SVIGR+C+IG N+++ NS + + IG+ I
Sbjct: 333 LAQSCKIGKCTAIGSGTKIGEGTKIENSVIGRNCQIGENIRIKNSFIWDDCIIGNNSIID 392
Query: 279 GSVICSNAQLQERVALKD-CQVG 300
S+I SNA L V L D C +G
Sbjct: 393 HSLIASNATLGSNVRLNDGCIIG 415
>sp|P09032|EI2BG_YEAST Translation initiation factor eIF-2B subunit gamma OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=GCD1 PE=1
SV=3
Length = 578
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 13/150 (8%)
Query: 169 VYIASNSKYCVRLNSIQAFMDINRDVIG-EANHLSGYNFSAQNNIIHPSAELGSKTTVGP 227
++I N +R N++ A+MD NR V+ ++ + N Q SA +G+ V P
Sbjct: 383 IFILPNETLFIRANNLNAYMDANRFVLKIKSQTMFTKNIQIQ------SAAIGADAIVDP 436
Query: 228 HCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQGSVICSNAQ 287
C Q+ +VK SV+G IGS +V S++ V +GD ++ +I A+
Sbjct: 437 KC------QISAHSNVKMSVLGTQANIGSRCRVAGSLLFPGVHLGDEVILENCIIGPMAK 490
Query: 288 LQERVALKDCQVGQGYVVSAGCEYKGESLA 317
+ + L +C + YVV +KGE+LA
Sbjct: 491 IGSKCKLSNCYIEGHYVVEPKNNFKGETLA 520
>sp|P87163|EI2BE_CANAL Translation initiation factor eIF-2B subunit epsilon OS=Candida
albicans (strain SC5314 / ATCC MYA-2876) GN=GCD6 PE=3
SV=2
Length = 732
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 77/142 (54%), Gaps = 23/142 (16%)
Query: 170 YIASNS-KYCVRLNSIQAFMDINRDVIG--------EANHLSGYNFSAQNN--------I 212
YI+ +S +Y R+ S + I++D++ ++N + G ++S + N I
Sbjct: 276 YISKDSSEYAARVESWSTYDAISQDILARWCYPLVPDSNLVEGNSYSYELNNIYKEDKII 335
Query: 213 IHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIG 272
+ S ++G+ T++G + +GEG+Q +K SVIGR+C IG NV + NS + ++ I
Sbjct: 336 LAQSCKIGTSTSIGRNSSVGEGTQ------IKNSVIGRNCTIGKNVVIENSYIWDNAVIK 389
Query: 273 DGCSIQGSVICSNAQLQERVAL 294
D + S++ ++AQ+ V L
Sbjct: 390 DNSVLNRSIVAADAQIGNNVTL 411
>sp|Q8CHW4|EI2BE_MOUSE Translation initiation factor eIF-2B subunit epsilon OS=Mus
musculus GN=Eif2b5 PE=1 SV=1
Length = 717
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%)
Query: 204 YNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNS 263
Y S N P LG + + + +LG G+ +G CS+ SVIG +C IG NV + +
Sbjct: 331 YTHSRHNIYRGPEVSLGHGSVLEENVLLGAGTVIGSNCSITNSVIGPNCHIGDNVVLDQA 390
Query: 264 VVMNHVTIGDGCSIQGSVICSNAQLQERVALK 295
+ V + G I S++C A+++ERV LK
Sbjct: 391 YLWQGVRVAAGAQIHQSLLCDRAEVKERVKLK 422
Score = 31.2 bits (69), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 270 TIGDGCSIQGSVICSNAQLQERVALKDCQVGQGYVVSAGCE 310
IG CSI SVI N + + V L + QG V+AG +
Sbjct: 363 VIGSNCSITNSVIGPNCHIGDNVVLDQAYLWQGVRVAAGAQ 403
>sp|Q64350|EI2BE_RAT Translation initiation factor eIF-2B subunit epsilon OS=Rattus
norvegicus GN=Eif2b5 PE=1 SV=2
Length = 716
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%)
Query: 204 YNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNS 263
Y S N P LG + + + +LG G+ +G CS+ SVIG +C IG NV + +
Sbjct: 330 YTHSRHNIYRGPEVSLGHGSVLEENVLLGAGTVVGSNCSITNSVIGPNCHIGDNVVLDQA 389
Query: 264 VVMNHVTIGDGCSIQGSVICSNAQLQERVALK 295
+ V + G I S++C A+++ERV LK
Sbjct: 390 YLWQGVRVAAGAQIHQSLLCDRAEVKERVILK 421
>sp|P56287|EI2BE_SCHPO Probable translation initiation factor eIF-2B subunit epsilon
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tif225 PE=1 SV=1
Length = 678
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 177 YCVRLNSIQAFMDINRDVIGEA-------NHLSGYNFSAQNNIIHPSAE--LGSKTTVGP 227
Y R+ S+Q + I++DV+ ++L FS Q + I+ + L +
Sbjct: 270 YAARVRSLQTYDAISKDVLSRWVYPFVPDSNLLNQTFSYQRHQIYKEEDVVLARSCIIKA 329
Query: 228 HCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQGSVICSNAQ 287
++G +++GD V ++IGR+C IGSN + ++ + V IGD C I +++ ++ +
Sbjct: 330 RTLIGAYTKVGDASVVANTIIGRNCTIGSNCSIDSAFLWEDVVIGDNCRIGKAILANSVK 389
Query: 288 LQERVALKDCQVGQGYVVSAGCEYKGESLARKEK 321
+ +C + G +V+AG ++ K K
Sbjct: 390 IG-----NNCSIEDGAIVAAGVVIGDNTIIEKNK 418
>sp|Q13144|EI2BE_HUMAN Translation initiation factor eIF-2B subunit epsilon OS=Homo
sapiens GN=EIF2B5 PE=1 SV=3
Length = 721
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 12/142 (8%)
Query: 176 KYCVRLNSIQAFMDINRDVI--------GEANHLSGYNFS---AQNNIIH-PSAELGSKT 223
+Y R++++ + + DVI EAN S +++NI P LG +
Sbjct: 295 EYGARVSNLHMYSAVCADVIRRWVYPLTPEANFTDSTTQSCTHSRHNIYRGPEVSLGHGS 354
Query: 224 TVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQGSVIC 283
+ + +LG G+ +G C + SVIG C IG NV + + + V + G I S++C
Sbjct: 355 ILEENVLLGSGTVIGSNCFITNSVIGPGCHIGDNVVLDQTYLWQGVRVAAGAQIHQSLLC 414
Query: 284 SNAQLQERVALKDCQVGQGYVV 305
NA+++ERV LK V VV
Sbjct: 415 DNAEVKERVTLKPRSVLTSQVV 436
>sp|P47823|EI2BE_RABIT Translation initiation factor eIF-2B subunit epsilon OS=Oryctolagus
cuniculus GN=EIF2B5 PE=1 SV=1
Length = 721
Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%)
Query: 215 PSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIGDG 274
P LG + + + +LG G+ +G CS+ SVIG C IG NV + + + V + G
Sbjct: 346 PEVSLGHGSILEENVLLGSGTVIGSNCSITNSVIGPGCCIGDNVVLDRAYLWKGVQVASG 405
Query: 275 CSIQGSVICSNAQLQERVALK 295
I S++C +A+++E+V LK
Sbjct: 406 AQIHQSLLCDHAEVKEQVTLK 426
>sp|P80361|EI2BG_CAEEL Probable translation initiation factor eIF-2B subunit gamma
OS=Caenorhabditis elegans GN=ppp-1 PE=2 SV=3
Length = 404
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 116/289 (40%), Gaps = 58/289 (20%)
Query: 21 KTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAF 80
K+KKP +++ + + L + + + + KS L+ + + + D H+YA
Sbjct: 152 KSKKPKATDVMAIVESTGQLAFLCGDDDFDAPLVMEKS-LKIFPSIKLTSKYNDCHVYAI 210
Query: 81 NRSVLQEVLDQKDKFQSLKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILA 140
VL L + S K D +P L+ Q + + I +YR+
Sbjct: 211 RHKVLLN-LSKSKHISSFKADFVPLLIDKQFEPDSDIKC--------------FAYRL-- 253
Query: 141 NASTPSFHELYALGPNGSAPVRRTHKCCVYIASNSKYCVRLNSIQAFMDINRDVIGEANH 200
P HE NG ++ +++ N++ ++ ++N+ +
Sbjct: 254 ----P--HE------NG------------FVTAHA------NTLGSYFEVNKAIQKSFTR 283
Query: 201 LSGYNFSAQNNIIHPSAELGSKT-TVGPHCMLGEGSQMGDKCSV-KRSVIGRHCRIGSNV 258
L Y + +N KT + H E S DK SV KRS I +CRIG
Sbjct: 284 LMEYRGNGKN--------FNYKTDKIAAHESRIEESAEIDKDSVIKRSFISDNCRIGEKT 335
Query: 259 KVVNSVVMNHVTIGDGCSIQGSVICSNAQLQERVALKDCQVGQGYVVSA 307
K+ S++ V IG+G SI S+IC ++ E + +C V + V A
Sbjct: 336 KLKESIIAKGVVIGNGASISNSIICDGVEIGENADVTNCIVAKDQKVPA 384
>sp|Q8RF63|GLGC_FUSNN Glucose-1-phosphate adenylyltransferase OS=Fusobacterium nucleatum
subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM
8532 / LMG 13131) GN=glgC PE=3 SV=1
Length = 384
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 64/127 (50%), Gaps = 14/127 (11%)
Query: 177 YCVRLNSIQAFMDINRDVIGEANHLSGYNFSAQNN----IIHPS---AELGSKTTVGPHC 229
Y + +IQ+F D + D++ E N L ++ S + N I PS E K T+
Sbjct: 245 YWRDVGTIQSFWDAHMDLLSEDNELDLFDKSWRVNTRQGIYTPSYFTKESKIKNTLIDKG 304
Query: 230 MLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQGSVICSNAQLQ 289
+ EG ++ SVI +IG N K+++S++M IGD +IQ ++I ++ ++
Sbjct: 305 CIVEGE-------IEHSVIFSGVKIGKNSKIIDSIIMADTEIGDNVTIQKAIIANDVKIV 357
Query: 290 ERVALKD 296
+ + + D
Sbjct: 358 DNIVIGD 364
>sp|Q54RF3|EI2BE_DICDI Translation initiation factor eIF-2B subunit epsilon
OS=Dictyostelium discoideum GN=eif2b5 PE=3 SV=1
Length = 707
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 11/130 (8%)
Query: 165 HKCCVYIASNSKYCVRLNSIQAFMDINRDVI--------GEANHL--SGYNFSAQNNIIH 214
+K Y+ +Y R+ ++ + +++D+I + N + S Y+ S Q
Sbjct: 264 YKLSAYVLQ-GEYAARVKDLRTYHSVSKDIIHRWTFPMVPDNNFMCNSSYSLSRQMIYKE 322
Query: 215 PSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIGDG 274
+ +L + ++G +++G V S IGR+C IG NVK+ S + + VTI D
Sbjct: 323 KNVKLLGDCLISDETVIGTQTEIGAGSIVSHSTIGRNCIIGKNVKINGSYIWDDVTIQDN 382
Query: 275 CSIQGSVICS 284
I S+IC+
Sbjct: 383 AIIDHSIICN 392
>sp|Q2JLY8|LPXD_SYNJB UDP-3-O-acylglucosamine N-acyltransferase OS=Synechococcus sp.
(strain JA-2-3B'a(2-13)) GN=lpxD PE=3 SV=1
Length = 363
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 212 IIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSV-IGRHCRIGSNVKV-VNSVVMNHV 269
+I PS ELG +GPH ++ EG ++GD + +V I H RIGS ++ N V+
Sbjct: 102 VIDPSVELGEGVAIGPHAVVMEGVKIGDHTQIHPNVTIYPHVRIGSRCQLFANCVIHERT 161
Query: 270 TIGDGCSIQ-GSVI 282
IGD C I G+VI
Sbjct: 162 EIGDDCLIHSGAVI 175
>sp|P37820|MPG1_SULAC Putative mannose-1-phosphate guanyltransferase OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=mpg1 PE=3 SV=2
Length = 359
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%)
Query: 212 IIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTI 271
I SA++ K + P +G+ + +G+ S++ S+IG + RIG+ V S++MN V +
Sbjct: 236 FISQSAKVSEKAELFPPFYIGDNTTVGEGSSIRNSIIGVNNRIGNGSCVEESILMNDVML 295
Query: 272 GDGCSIQGSVICSNAQLQERVALKDCQVGQGYVV 305
GD I+ SVI L + + +G G ++
Sbjct: 296 GDFSLIKESVIGDEVSLGKWNRVDGAIIGDGVLI 329
>sp|Q2JVM2|LPXD_SYNJA UDP-3-O-acylglucosamine N-acyltransferase OS=Synechococcus sp.
(strain JA-3-3Ab) GN=lpxD PE=3 SV=1
Length = 343
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 212 IIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSV-IGRHCRIGSNVKVV-NSVVMNHV 269
+I PS ELG +GPH ++ EG ++GD + +V I H R+GS ++ N V+
Sbjct: 102 VIDPSVELGEGVAIGPHVVVMEGVKIGDYTQIHPNVTIYPHVRVGSRCQLFANCVIHERT 161
Query: 270 TIGDGCSIQ-GSVI 282
IGD C I G+VI
Sbjct: 162 EIGDDCLIHSGAVI 175
>sp|Q2IW89|LPXD_RHOP2 UDP-3-O-acylglucosamine N-acyltransferase OS=Rhodopseudomonas
palustris (strain HaA2) GN=lpxD PE=3 SV=1
Length = 359
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 10/106 (9%)
Query: 182 NSIQAFMDINRDVIGEA-NHLSGYNFS--AQNNIIHPSAELGSKTTV------GPHCMLG 232
+ +QAF+ R + +A +SG+ + A + +IHPSA L V GP +G
Sbjct: 91 SPVQAFVAYARHIHEDAMRPMSGFGGTGIAPSAVIHPSARLEDGVIVDPLAVIGPDVEIG 150
Query: 233 EGSQMGDKCSVKRSV-IGRHCRIGSNVKVVNSVVMNHVTIGDGCSI 277
GS +G + V IGR C +G+N + S++ N+V I GC I
Sbjct: 151 AGSVIGAGAVIASGVKIGRDCNVGANTTIQFSLIGNNVLIHPGCHI 196
Score = 38.1 bits (87), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 18/84 (21%)
Query: 212 IIHPSAELGSKTTVGP----HCMLGEGSQMGDKCSVKRSV-IGRHCRIGSNVKVVNSVVM 266
II E+GS TTV ++GEG+++ ++ V +V IGRHC I + + S+ +
Sbjct: 219 IIQNDVEIGSGTTVDRGGLRDTVIGEGTKIDNQVQVGHNVTIGRHCVIAAQCGLAGSLTL 278
Query: 267 -------------NHVTIGDGCSI 277
NHV IGDG I
Sbjct: 279 GDNVALGAKVGINNHVMIGDGAQI 302
>sp|Q215C1|LPXD2_RHOPB UDP-3-O-acylglucosamine N-acyltransferase 2 OS=Rhodopseudomonas
palustris (strain BisB18) GN=lpxD2 PE=3 SV=1
Length = 373
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 24/157 (15%)
Query: 170 YIASNSKYCVRL-NSIQAFMDINRDVIGEA---NHLSGYNFSAQNNIIHPSAELGSKTTV 225
++A S +R+ +AF+ + R + A L G A ++HPSA+L + TV
Sbjct: 78 HLAPESVAVLRIAKPYEAFVAVARRLYPSALRPTSLFGTLGVAPGAVVHPSAKLAAGVTV 137
Query: 226 GPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQGSVICSN 285
P ++G +++G K S+IG N+V+ HV IG C+I ++
Sbjct: 138 DPGAVIGPRAEIG-----KGSLIG-----------ANAVIGPHVKIGADCAIGAGCTVTH 181
Query: 286 AQLQERVAL-KDCQVGQ---GYVVSAGCEYKGESLAR 318
+++ +RV + Q+GQ GY+ SA K + R
Sbjct: 182 SEIGDRVIVHPGSQIGQDGFGYISSANGHTKVPQIGR 218
>sp|A3DIP9|GLMU_CLOTH Bifunctional protein GlmU OS=Clostridium thermocellum (strain ATCC
27405 / DSM 1237) GN=glmU PE=3 SV=2
Length = 461
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 15/112 (13%)
Query: 210 NNIIHPSAELGSKTTVGPHCMLGEGS-----QMGDKCSVKRSVIGRHCRIGSNVKV---- 260
+ +++PS + KT +G C++G GS Q+ D+ VK SV+ I ++ KV
Sbjct: 272 DTVVYPSTIIEGKTKIGEDCIIGPGSRLVNAQISDRVEVKNSVV-LESSIDNDTKVGPFA 330
Query: 261 ---VNSVVMNHVTIGDGCSIQGSVICSNAQLQERVALKDCQVGQGYVVSAGC 309
SV+ +V IGD I+ SVI ++ + D +VG+ V+ GC
Sbjct: 331 YVRPGSVIGKNVKIGDFVEIKKSVIGDKTKISHLTYVGDAEVGKN--VNLGC 380
>sp|Q0APV5|LPXD_MARMM UDP-3-O-acylglucosamine N-acyltransferase OS=Maricaulis maris
(strain MCS10) GN=lpxD PE=3 SV=1
Length = 344
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 208 AQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSV-KRSVIGRHCRIGSNVKVVNSVVM 266
A ++ I PSA++G+ T +G ++GEG+++G C + VIG CRIG ++ V +
Sbjct: 113 ATDSFIDPSAKIGAGTRLGAGVVIGEGAEIGTDCVIGPHCVIGPGCRIGDRSRLSPHVSL 172
Query: 267 NHVTIGDGCSI-QGSVI 282
IG C+I G+VI
Sbjct: 173 QCSDIGADCNILAGAVI 189
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 26/93 (27%)
Query: 212 IIHPSAELGSKTTVGPHCMLGEGSQMGDK------CSVKRSVIGRHCRI---------GS 256
+I AE+G+ +GPHC++G G ++GD+ S++ S IG C I G
Sbjct: 135 VIGEGAEIGTDCVIGPHCVIGPGCRIGDRSRLSPHVSLQCSDIGADCNILAGAVIGEDGF 194
Query: 257 NVKVVNS-----------VVMNHVTIGDGCSIQ 278
+ V N ++ +HVTIG C+I
Sbjct: 195 GIAVSNGNTVGILHLGSVLIGDHVTIGANCTID 227
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 195 IGEANHLSGYNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSV 247
IGE ++GY+ A + +I +A LG + V H +GEG+++G + R V
Sbjct: 254 IGENVIMAGYSGLAGSAVIADNAMLGGRVGVYDHVTIGEGARVGANSAASRDV 306
>sp|O08327|GLGD_GEOSE Glycogen biosynthesis protein GlgD OS=Geobacillus
stearothermophilus GN=glgD PE=3 SV=1
Length = 343
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 11/113 (9%)
Query: 215 PSAELGSKTTVGPHCMLG-EG----SQMGDKC----SVKRSVIGRHCRIGSNVKVVNSVV 265
PS + +K P G EG S + + C +V+ SV+ R +IG V NS++
Sbjct: 233 PSHPIYTKVKDEPPTKYGREGNVKRSMIANGCVIEGTVENSVLFRSVKIGKGAVVRNSII 292
Query: 266 MNHVTIGDGCSIQGSVICSNAQLQERVALKDCQVGQGYVVSAGCEYKGESLAR 318
M IGDGC + G +I +A+++ V LK + Q ++V G +GE ++R
Sbjct: 293 MQKCQIGDGCVLDGVIIDKDAKVEPGVVLKGTK-EQPFIVRKGT-VQGEVISR 343
>sp|B0KBF5|GLMU_THEP3 Bifunctional protein GlmU OS=Thermoanaerobacter pseudethanolicus
(strain ATCC 33223 / 39E) GN=glmU PE=3 SV=1
Length = 457
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 58/105 (55%), Gaps = 11/105 (10%)
Query: 212 IIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKV-------VNSV 264
+I ++GS +GP+C + + S++GD CSV SVI +I +NVK+ +V
Sbjct: 278 VIEGKTKIGSDCEIGPNCRIVD-SEIGDGCSVTYSVI-LSSKIKNNVKIGPFAHIRPETV 335
Query: 265 VMNHVTIGDGCSIQGSVICSNAQLQERVALKDCQVGQGYVVSAGC 309
+ ++V IGD I+ S+I +++ + D +VG+ V+ GC
Sbjct: 336 IQSNVKIGDFVEIKKSIIDEGSKVPHLTYVGDAEVGKN--VNMGC 378
Score = 40.0 bits (92), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 17/73 (23%)
Query: 213 IHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIG 272
I E+G+ T V P C++ EG ++ IG C IG N ++V+S IG
Sbjct: 261 IGAEVEIGADTVVLPGCVI-EG----------KTKIGSDCEIGPNCRIVDS------EIG 303
Query: 273 DGCSIQGSVICSN 285
DGCS+ SVI S+
Sbjct: 304 DGCSVTYSVILSS 316
>sp|A4J0P6|GLMU_DESRM Bifunctional protein GlmU OS=Desulfotomaculum reducens (strain
MI-1) GN=glmU PE=3 SV=1
Length = 456
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 14/119 (11%)
Query: 210 NNIIHPSAELGSKTTVGPHCMLGEGSQ-----MGDKCSVKRSV-----IGRHCRIGSNVK 259
+ +I P L KT +G C+LG GS+ +GD+ ++ SV IG IG
Sbjct: 271 DTVILPFTFLQGKTEIGSQCVLGPGSKINNCIIGDRNEIQYSVLVESKIGNDATIGPYAY 330
Query: 260 V-VNSVVMNHVTIGDGCSIQGSVICSNAQLQERVALKDCQVGQGYVVSAG---CEYKGE 314
+ +V+ +HV +GD I+ S I +++ + D +G+ V AG C Y G+
Sbjct: 331 LRPGTVLADHVKVGDFVEIKKSTIGHGSKIPHLSYVGDATIGEKVNVGAGTITCNYDGK 389
>sp|A3DK82|GLGC_CLOTH Glucose-1-phosphate adenylyltransferase OS=Clostridium thermocellum
(strain ATCC 27405 / DSM 1237) GN=glgC PE=3 SV=1
Length = 426
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 17/125 (13%)
Query: 177 YCVRLNSIQAFMDINRDVIGEANHLSGYNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQ 236
Y + +IQA+ + N D+I N+ P+ ++ + V P
Sbjct: 242 YWRDVGTIQAYWESNMDLISRVPEF---------NLFDPAWKIYTPNPVKP------AHY 286
Query: 237 MGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQGSVICSNAQLQERVALKD 296
+G SVK+S++ C I +V+ NSV+ V + +G I S++ S++ + E +
Sbjct: 287 IGPTGSVKKSIVAEGCMIYGSVR--NSVLFPGVYVSEGAEIVDSIVMSDSVIGENTQIYK 344
Query: 297 CQVGQ 301
C +G+
Sbjct: 345 CIIGE 349
>sp|Q752H4|MPG1_ASHGO Mannose-1-phosphate guanyltransferase OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=MPG1 PE=3 SV=1
Length = 361
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 210 NNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHV 269
N II PSA++ +GP ++G +G+ + RSV+ I + V +++V H
Sbjct: 254 NVIIDPSAKISGSAKLGPDVVIGPNVTIGEGVRITRSVVLSDSTINDHSLVKSTIVGWHS 313
Query: 270 TIGDGCSIQG-SVICSNAQLQERVALKDCQV 299
T+G C ++G SV+ + ++++ V + +V
Sbjct: 314 TVGKWCRLEGCSVLGDDVEVKDEVYVNGGKV 344
Score = 32.0 bits (71), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 247 VIGRHCRIGSNVKVVNSVVMN-HVTIGDGCSIQGSVICSNAQLQERVALKDCQVGQGYVV 305
+I +I + K+ VV+ +VTIG+G I SV+ S++ + + +K VG V
Sbjct: 256 IIDPSAKISGSAKLGPDVVIGPNVTIGEGVRITRSVVLSDSTINDHSLVKSTIVGWHSTV 315
Query: 306 SAGCEYKG 313
C +G
Sbjct: 316 GKWCRLEG 323
>sp|Q6FRY2|MPG12_CANGA Mannose-1-phosphate guanyltransferase 2 OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=MPG1 PE=3 SV=1
Length = 361
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 208 AQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMN 267
N II P+A++ +GP ++G +G + RSV+ ++C + N + +++V
Sbjct: 252 VSNAIIDPTAKISPDAKIGPDVVIGPNCVIGSGVRIVRSVLLKNCVVKENSLIKDTIVGW 311
Query: 268 HVTIGDGCSIQGSVICSNAQLQERVALKD 296
TIG C ++G A L VA+KD
Sbjct: 312 DSTIGRWCRLEGC-----AVLGHDVAVKD 335
Score = 31.6 bits (70), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 243 VKRSVIGRHCRIGSNVKVVNSVVMN-HVTIGDGCSIQGSVICSNAQLQERVALKDCQVGQ 301
V ++I +I + K+ VV+ + IG G I SV+ N ++E +KD VG
Sbjct: 252 VSNAIIDPTAKISPDAKIGPDVVIGPNCVIGSGVRIVRSVLLKNCVVKENSLIKDTIVGW 311
Query: 302 GYVVSAGCEYKG 313
+ C +G
Sbjct: 312 DSTIGRWCRLEG 323
>sp|O93827|MPG1_CANAL Mannose-1-phosphate guanyltransferase OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=MPG1 PE=1 SV=1
Length = 362
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 16/87 (18%)
Query: 213 IHPSAELGSKTTVGPHCMLGEG-----------SQMGDKCSVKRSVIGRHCRIGSNVKVV 261
IHPSA +G T+GP+ ++GEG SQ+ D VK +++G + RIG +
Sbjct: 264 IHPSALIGPNVTIGPNVVVGEGARIQRSVLLANSQVKDHAWVKSTIVGWNSRIGKWARTE 323
Query: 262 NSVVMNHVTIGDGCSIQGSVICSNAQL 288
V+ GD ++ + + A++
Sbjct: 324 GVTVL-----GDDVEVKNEIYVNGAKV 345
>sp|O74624|MPG1_HYPJE Mannose-1-phosphate guanyltransferase OS=Hypocrea jecorina GN=mpg1
PE=1 SV=1
Length = 364
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 18/101 (17%)
Query: 210 NNIIHPSAELGSKTTVGPH-----------------CMLGEGSQMGDKCSVKRSVIGRHC 252
N +IHPSA++G +GP+ C+L +GS++ D VK +++G +
Sbjct: 257 NVMIHPSAKIGKNCRIGPNVTIGPDVVVGDGVRLQRCVLLKGSKVKDHAWVKSTIVGWNS 316
Query: 253 RIGSNVKVVNSVVM-NHVTIGDGCSIQGSVICSNAQLQERV 292
+G ++ N V+ + VTIGD + G + + ++ V
Sbjct: 317 TVGRWARLENVTVLGDDVTIGDEIYVNGGSVLPHKSIKANV 357
>sp|Q6MAE7|LPXD_PARUW UDP-3-O-acylglucosamine N-acyltransferase OS=Protochlamydia
amoebophila (strain UWE25) GN=lpxD PE=3 SV=1
Length = 349
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Query: 177 YCVRLNSIQAFMDINRDVIGEANHLSGYNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQ 236
Y + N ++F + + + H SG+ + +IHP+AE+G+K T+ P ++ EG +
Sbjct: 76 YLLSENPSRSFQHLIDTLYPQKKHPSGFTGIHTSAVIHPTAEIGNKVTICPQAVIDEGVK 135
Query: 237 MGDKCSVKRSV-IGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQGSVICSNAQLQERVALK 295
+G + V IG + IG + + VV I + C + VI LQ V +
Sbjct: 136 IGSGSFIGAGVYIGSYSEIGEDCTIHPRVV-----IREKCYLGNRVI-----LQPGVVIG 185
Query: 296 DCQVG 300
C G
Sbjct: 186 SCGFG 190
>sp|O60064|YBB2_SCHPO Probable mannose-1-phosphate guanyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC13G1.02 PE=3 SV=1
Length = 414
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 209 QNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNH 268
Q IHP+A + +GP+ +G ++ D ++ S+I C I +N V++S++ H
Sbjct: 286 QPVFIHPNAIVSKGAKIGPNVSIGARVRIEDGARIRNSIIQEDCEISANAVVLHSILSRH 345
Query: 269 VTIGDGCSIQGS 280
IG ++GS
Sbjct: 346 CKIGKWSRVEGS 357
>sp|Q1MPK2|LPXD_LAWIP UDP-3-O-acylglucosamine N-acyltransferase OS=Lawsonia
intracellularis (strain PHE/MN1-00) GN=lpxD PE=3 SV=1
Length = 341
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 213 IHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSV-IGRHCRIGSNVKVV-NSVVMNHVT 270
IHP+A++ T+ P +G + + + ++ V IG HC IG N + N+V+M + +
Sbjct: 104 IHPTAQVSKTATIYPFVFIGSHTVIEENTTLFPGVYIGEHCHIGKNCTIYPNTVLMANTS 163
Query: 271 IGDGCSIQGSVI 282
IG+ C I V+
Sbjct: 164 IGNDCIIHAGVV 175
>sp|Q7RVR8|MPG1_NEUCR Mannose-1-phosphate guanyltransferase OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=mpg-1 PE=3 SV=1
Length = 364
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 18/101 (17%)
Query: 210 NNIIHPSAELGSKTTVGPH-----------------CMLGEGSQMGDKCSVKRSVIGRHC 252
N +I PSA++G +GP+ C+L EGS++ D VK +++G +
Sbjct: 257 NVLIDPSAKIGKNCRIGPNVTIGPNVVVGDGVRLQRCVLLEGSKVKDHAWVKSTIVGWNS 316
Query: 253 RIGSNVKVVNSVVM-NHVTIGDGCSIQGSVICSNAQLQERV 292
+G ++ N V+ + VTIGD + G I + ++ V
Sbjct: 317 TVGKWARLENVTVLGDDVTIGDEIYVNGGSILPHKTIKANV 357
>sp|P12298|GLGL1_WHEAT Glucose-1-phosphate adenylyltransferase large subunit (Fragment)
OS=Triticum aestivum GN=AGA.1 PE=2 SV=1
Length = 301
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 35/149 (23%)
Query: 177 YCVRLNSIQAFMDINRDVIGEANHLSGYN-----FSAQNNIIHPSAELGSKTT---VGPH 228
Y + +I++F + N + + + S Y+ ++++ N+ PS GSK T +
Sbjct: 128 YWEDIGTIKSFFEANLALAEQPSKFSFYDASKPMYTSRRNL-PPSMISGSKITDSIISHG 186
Query: 229 CMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNH-------------------V 269
C L DKC V+ SV+G RIGSNV + ++V++ +
Sbjct: 187 CFL-------DKCRVEHSVVGIRSRIGSNVHLKDTVMLGADFYETDMERGDQLAEGKVPI 239
Query: 270 TIGDGCSIQGSVICSNAQLQERVALKDCQ 298
IG+ SIQ +I NA++ + V + + +
Sbjct: 240 GIGENTSIQNCIIDKNARIGKNVTIANAE 268
>sp|Q6LKA2|GLGC_PHOPR Glucose-1-phosphate adenylyltransferase OS=Photobacterium profundum
GN=glgC PE=3 SV=1
Length = 405
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 9/122 (7%)
Query: 174 NSKYCVRLNSIQAFMDINRDVIGEANHLSGYNFSAQNNIIHPSAELG-------SKTTVG 226
N+ Y + +I+A+ + D++ E S YN Q + +P SK +
Sbjct: 251 NTGYWRDVGTIEAYWQAHMDLLSEDAPFSLYNRQWQLHTHYPPLPPATILDSENSKVDIN 310
Query: 227 PHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQGSVICSNA 286
+CM+ GS + + +S++G + N + SV++ V IG CSI+ ++I N
Sbjct: 311 -NCMISAGSYI-RGAQIHKSILGFRTNVDHNTMISESVILGDVKIGANCSIRKAIIDKNV 368
Query: 287 QL 288
+
Sbjct: 369 HI 370
>sp|Q7MBG1|GLMU_CHRVO Bifunctional protein GlmU OS=Chromobacterium violaceum (strain ATCC
12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 /
NCTC 9757) GN=glmU PE=3 SV=1
Length = 455
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
Query: 193 DVIGEANHLSGYNFSAQNNIIHPSA-ELGSKTTVGPHCML-----GEGSQMGDKCSVKRS 246
D+ GE H G + S + A ELG + +G HC+L G+++ ++ +
Sbjct: 259 DIRGELKH--GMDVSIDIGCVFEGAVELGDQVEIGAHCVLKNVKIASGTRIAPFSHLEDA 316
Query: 247 VIGRHCRIGSNVKV-VNSVVMNHVTIGDGCSIQGSVICSNAQLQERVALKDCQVGQGYVV 305
V+G CRIG ++ + + HV IG+ ++ S I +++ + D ++G+ V
Sbjct: 317 VVGAECRIGPYARLRPGAELAGHVHIGNFVEVKKSKIGEGSKVNHLSYVGDAEIGRKVNV 376
Query: 306 SAG---CEYKG 313
AG C Y G
Sbjct: 377 GAGSVTCNYDG 387
>sp|Q215E0|LPXD1_RHOPB UDP-3-O-acylglucosamine N-acyltransferase 1 OS=Rhodopseudomonas
palustris (strain BisB18) GN=lpxD1 PE=3 SV=1
Length = 358
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 202 SGYNFS--AQNNIIHPSAELGSKTTV------GPHCMLGEGSQMGDKCSVKRSV-IGRHC 252
SG++ + A + +IHP+A L TV GP +G GS +G + V IGR C
Sbjct: 112 SGFDLTGIAASAVIHPTARLEDGVTVDPLAVIGPQVEIGAGSVIGSGAVLSPGVRIGRDC 171
Query: 253 RIGSNVKVVNSVVMNHVTIGDGCSI 277
+G+ + +++ N+V I GC I
Sbjct: 172 NVGAGTVIQFALIGNNVLIHPGCQI 196
>sp|Q8R752|GLMU_THETN Bifunctional protein GlmU OS=Thermoanaerobacter tengcongensis
(strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
GN=glmU PE=3 SV=1
Length = 457
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 15/114 (13%)
Query: 208 AQNNIIHPSAELGSKTTVGPHCMLGEGSQM-----GDKCSVKRSVIGRHCRIGSNVKV-- 260
++ +I P L KT +G C +G S++ G+ C+V SV+ +G+NVK+
Sbjct: 268 GRDTVILPGTILQGKTKIGEDCEIGPNSRIVDSTIGNGCNVMYSVV-LSSSVGNNVKIGP 326
Query: 261 -----VNSVVMNHVTIGDGCSIQGSVICSNAQLQERVALKDCQVGQGYVVSAGC 309
SV+ N+V IGD I+ SVI +++ + D ++G+ V+ GC
Sbjct: 327 FAHIRPESVIKNNVKIGDFVEIKKSVIDEGSKVPHLTYVGDAELGKN--VNMGC 378
>sp|Q0A4N0|GLMU_ALHEH Bifunctional protein GlmU OS=Alkalilimnicola ehrlichei (strain
MLHE-1) GN=glmU PE=3 SV=2
Length = 463
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 52/126 (41%), Gaps = 25/126 (19%)
Query: 212 IIHPSAELGSKTTVGPHCM-----LGEGSQMGDKCSVKRSVIGRHCRIG----------- 255
++ ELG+ +GPHC+ LG+G+++ + + GR+CRIG
Sbjct: 278 VLEGRVELGAGVEIGPHCVLRDVALGDGTRVEAHSVLDGATAGRNCRIGPFARLRPGTDL 337
Query: 256 -SNVKVVNSVVMNHVTIGDGCSIQGSVICSNAQLQERVALKDCQVGQGYVVSAGCEYKGE 314
KV N V IG G + +A+L +D VG G + C Y G
Sbjct: 338 ADGAKVGNFVETKAARIGPGSKVNHLSYMGDAELG-----RDVNVGAGTIT---CNYDGH 389
Query: 315 SLARKE 320
S R E
Sbjct: 390 SKHRTE 395
>sp|Q9P8N0|MPG1_PICAN Mannose-1-phosphate guanyltransferase OS=Pichia angusta GN=MPG1
PE=3 SV=1
Length = 364
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 210 NNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHV 269
N +I PSA++G +GP+ ++G +GD ++RS I ++ +I + V +++V +
Sbjct: 257 NVLIDPSAKIGKGCKIGPNVVIGPNCIIGDGVRIQRSTILKNSQIKDHAWVKSTIVGWNS 316
Query: 270 TIGDGCSIQGSVICSNAQLQERVALKD 296
T+G ++G + L E V +KD
Sbjct: 317 TVGKWARLEGVTV-----LGEDVTVKD 338
Score = 40.0 bits (92), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 248 IGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQGSVICSNAQLQERVALKDCQVGQGYVVSA 307
IG+ C+IG NV V+ + IGDG IQ S I N+Q+++ +K VG V
Sbjct: 266 IGKGCKIGPNV-----VIGPNCIIGDGVRIQRSTILKNSQIKDHAWVKSTIVGWNSTVGK 320
Query: 308 GCEYKGESL 316
+G ++
Sbjct: 321 WARLEGVTV 329
>sp|P41940|MPG1_YEAST Mannose-1-phosphate guanyltransferase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PSA1 PE=1 SV=2
Length = 361
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 210 NNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHV 269
N +I P+A++ S +GP ++G +GD + RSV+ + I ++ V +++V +
Sbjct: 254 NALIDPTAKISSTAKIGPDVVIGPNVTIGDGVRITRSVVLCNSTIKNHSLVKSTIVGWNS 313
Query: 270 TIGDGCSIQG-SVICSNAQLQERVALKDCQV 299
T+G C ++G +V+ + ++++ + + +V
Sbjct: 314 TVGQWCRLEGVTVLGDDVEVKDEIYINGGKV 344
Score = 36.2 bits (82), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 243 VKRSVIGRHCRIGSNVKVVNSVVMN-HVTIGDGCSIQGSVICSNAQLQERVALKDCQVGQ 301
V ++I +I S K+ VV+ +VTIGDG I SV+ N+ ++ +K VG
Sbjct: 252 VGNALIDPTAKISSTAKIGPDVVIGPNVTIGDGVRITRSVVLCNSTIKNHSLVKSTIVGW 311
Query: 302 GYVVSAGCEYKGESL 316
V C +G ++
Sbjct: 312 NSTVGQWCRLEGVTV 326
>sp|Q5X0T1|LPXD2_LEGPA UDP-3-O-acylglucosamine N-acyltransferase 2 OS=Legionella
pneumophila (strain Paris) GN=lpxD2 PE=3 SV=1
Length = 343
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 14/113 (12%)
Query: 204 YNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNS 263
Y ++ I PSA++ S +G C + G+ +G+ IG+ C+IG VN+
Sbjct: 104 YPSEKSSSFIAPSAKIESTALIGSDCSIAHGAYVGNHAR-----IGKRCKIG-----VNT 153
Query: 264 VVMNHVTIGDGCSIQGSVICSNAQLQERVAL----KDCQVGQGYVVSAGCEYK 312
+ + VTIGD C I+ +V +A + V + + Q G G+ A YK
Sbjct: 154 YIGDGVTIGDNCIIEDNVSIRHAVIGSNVVVYPGARIGQDGFGFASDAEGHYK 206
>sp|Q18A75|GLGC_CLOD6 Glucose-1-phosphate adenylyltransferase OS=Clostridium difficile
(strain 630) GN=glgC PE=3 SV=1
Length = 386
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 17/125 (13%)
Query: 177 YCVRLNSIQAFMDINRDVIGEANHLSGYNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQ 236
Y + +IQ+ D N D+I L ++ P ++ + T P +G+ +
Sbjct: 242 YWRDVGTIQSLWDANMDIIKSPETL---------DLADPKWKIYTNTMAMPPQYIGKNA- 291
Query: 237 MGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQGSVICSNAQLQERVALKD 296
+V RS+I CRI V NSV+ + V +G G + SVI N + E V ++
Sbjct: 292 -----NVHRSMIADGCRILGEVG--NSVLSHGVVVGKGSKVIDSVIMPNVVIGENVTIEK 344
Query: 297 CQVGQ 301
+G+
Sbjct: 345 AMIGE 349
>sp|B4RBY4|LPXD_PHEZH UDP-3-O-acylglucosamine N-acyltransferase OS=Phenylobacterium
zucineum (strain HLK1) GN=lpxD PE=3 SV=1
Length = 343
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 203 GYNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSV-IGRHCRIGSNVKVV 261
G + A + ++ P ELG+ +GP +G G+++G V V IGR C IG+NV +
Sbjct: 109 GSDAIAPDVVLEPGVELGAGVVLGPGVKVGRGTRIGPNAVVGAGVAIGRECDIGANVTLG 168
Query: 262 NSVVMNHVTIGDGCSI 277
+++ + V I G I
Sbjct: 169 FALLGDRVRILAGAVI 184
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 34/70 (48%)
Query: 212 IIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTI 271
++ P ++G T +GP+ ++G G +G +C + +V +G V+++ V+
Sbjct: 130 VLGPGVKVGRGTRIGPNAVVGAGVAIGRECDIGANVTLGFALLGDRVRILAGAVIGEPGF 189
Query: 272 GDGCSIQGSV 281
G QG +
Sbjct: 190 GATAGAQGLI 199
>sp|Q24VW5|GLGC_DESHY Glucose-1-phosphate adenylyltransferase OS=Desulfitobacterium
hafniense (strain Y51) GN=glgC PE=3 SV=1
Length = 398
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 236 QMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQGSVICSNAQLQERVALK 295
+G++ + S+IG C I V+ +SV+ + V +G+G I+ S++ N+++ E V L
Sbjct: 286 HLGERAKIHNSLIGNGCTILGEVR--DSVIASGVYVGEGSLIEQSILLPNSEIYEDVRLH 343
Query: 296 DCQVGQGYVVSAGC 309
+G+ +V A C
Sbjct: 344 KTILGENAIVRAHC 357
>sp|Q312H3|LPXD_DESDG UDP-3-O-acylglucosamine N-acyltransferase OS=Desulfovibrio
desulfuricans (strain G20) GN=lpxD PE=3 SV=2
Length = 342
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Query: 181 LNSIQAFMDINRDVIGEANHLSGYNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDK 240
L S + D R + A ++ + IHP AE+G T+ PH +G +++G+
Sbjct: 69 LISANPYFDFGRTLHLFARPQGSFSGISDMAYIHPEAEIGGGCTIYPHVYIGARARIGEG 128
Query: 241 CSVKRS-VIGRHCRIGSNVKVV-NSVVMNHVTIGDGCSIQGSVI 282
++ +G C +G N + N +M T+GD C + V+
Sbjct: 129 TTLFPGCYVGEDCAVGENCLLYPNVTLMAATTVGDDCVLHSGVV 172
Score = 32.0 bits (71), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 15/85 (17%)
Query: 208 AQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKC--------------SVKRSVIGRHCR 253
+N +++P+ L + TTVG C+L G +G + R +G
Sbjct: 144 GENCLLYPNVTLMAATTVGDDCVLHSGVVLGADGFGFARTEYGIQKIPQIGRVHVGNDVE 203
Query: 254 IGSNVKVVNSVVMNHVTIGDGCSIQ 278
IG+N ++ V+ TIGDG +
Sbjct: 204 IGANTA-IDRAVLGVTTIGDGTKMD 227
>sp|A8I485|LPXD_AZOC5 UDP-3-O-acylglucosamine N-acyltransferase OS=Azorhizobium
caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571)
GN=lpxD PE=3 SV=1
Length = 357
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 186 AFMDINRDVIGEA---NHLSGYNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCS 242
AF+ + R + +A + G+ A IHP+A L + TV P ++G G+++G
Sbjct: 96 AFVAVTRQLFPQALRPQPVFGHTGIAPGAFIHPTASLEAGVTVDPGAVIGPGAEVGAGSV 155
Query: 243 V-KRSVIGRHCRIGSNVKVVNSVVMNHVTIGD 273
+ +V+G RIG + + V ++H +G+
Sbjct: 156 ICANAVVGAGVRIGRDSTIGAGVSLSHALVGN 187
Score = 31.6 bits (70), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 14/66 (21%)
Query: 229 CMLGEGSQMGDKCSVKRSV-IGRHCRIGSNVKVVNSV-------------VMNHVTIGDG 274
++GEG+++ + + +V IGRHC I S + S V+ H TIGDG
Sbjct: 242 TVIGEGTKIDNLVQIAHNVVIGRHCIIVSQTGISGSTTLGDFVMLGGQVGVVGHCTIGDG 301
Query: 275 CSIQGS 280
I S
Sbjct: 302 AQIAAS 307
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 114,762,743
Number of Sequences: 539616
Number of extensions: 4662300
Number of successful extensions: 14994
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 314
Number of HSP's successfully gapped in prelim test: 659
Number of HSP's that attempted gapping in prelim test: 12385
Number of HSP's gapped (non-prelim): 2371
length of query: 321
length of database: 191,569,459
effective HSP length: 117
effective length of query: 204
effective length of database: 128,434,387
effective search space: 26200614948
effective search space used: 26200614948
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)