Query 020815
Match_columns 321
No_of_seqs 490 out of 2736
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 08:35:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020815.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020815hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jsk_A Cypbp37 protein; octame 100.0 6.9E-44 2.4E-48 325.0 15.6 260 61-320 50-329 (344)
2 2gjc_A Thiazole biosynthetic e 100.0 2.8E-38 9.5E-43 286.6 16.8 261 60-320 35-319 (326)
3 1rp0_A ARA6, thiazole biosynth 100.0 3E-33 1E-37 251.2 18.1 265 55-319 4-268 (284)
4 3fpz_A Thiazole biosynthetic e 100.0 8.4E-28 2.9E-32 219.7 21.5 262 57-319 32-318 (326)
5 2cul_A Glucose-inhibited divis 99.7 3.4E-17 1.2E-21 142.1 14.1 190 90-319 3-225 (232)
6 3oz2_A Digeranylgeranylglycero 99.7 1.2E-15 4.2E-20 141.3 15.7 132 90-243 4-163 (397)
7 2i0z_A NAD(FAD)-utilizing dehy 99.7 1.2E-15 4E-20 145.0 14.6 153 89-257 25-210 (447)
8 4at0_A 3-ketosteroid-delta4-5a 99.6 1.6E-15 5.4E-20 146.5 15.2 141 89-242 40-264 (510)
9 1y0p_A Fumarate reductase flav 99.6 2.9E-15 1E-19 146.5 16.6 143 89-243 125-318 (571)
10 1qo8_A Flavocytochrome C3 fuma 99.6 1.9E-15 6.4E-20 147.8 14.3 143 89-243 120-313 (566)
11 3v76_A Flavoprotein; structura 99.6 3.4E-15 1.2E-19 140.5 15.1 164 89-270 26-221 (417)
12 2h88_A Succinate dehydrogenase 99.6 1.8E-15 6.3E-20 148.8 11.9 143 90-243 18-218 (621)
13 2gqf_A Hypothetical protein HI 99.6 1.2E-14 4.2E-19 136.1 15.8 161 90-268 4-200 (401)
14 2bs2_A Quinol-fumarate reducta 99.6 4.9E-15 1.7E-19 146.7 13.6 142 90-242 5-220 (660)
15 3cgv_A Geranylgeranyl reductas 99.6 2.5E-14 8.4E-19 133.0 15.1 131 90-242 4-162 (397)
16 1chu_A Protein (L-aspartate ox 99.6 9.1E-15 3.1E-19 142.0 11.8 144 89-243 7-209 (540)
17 3gyx_A Adenylylsulfate reducta 99.6 6.4E-15 2.2E-19 145.9 10.7 145 90-243 22-234 (662)
18 1d4d_A Flavocytochrome C fumar 99.6 5.1E-14 1.7E-18 137.7 16.2 143 89-243 125-318 (572)
19 2wdq_A Succinate dehydrogenase 99.6 2.5E-14 8.6E-19 140.2 14.0 142 90-242 7-206 (588)
20 1kf6_A Fumarate reductase flav 99.6 2.8E-14 9.6E-19 140.2 14.3 144 90-243 5-198 (602)
21 1jnr_A Adenylylsulfate reducta 99.5 2.9E-14 9.8E-19 141.3 12.9 145 89-243 21-219 (643)
22 3dme_A Conserved exported prot 99.5 6.7E-14 2.3E-18 128.4 13.7 139 90-242 4-209 (369)
23 3e1t_A Halogenase; flavoprotei 99.5 1.2E-13 4.1E-18 133.3 15.6 142 90-245 7-175 (512)
24 3atr_A Conserved archaeal prot 99.5 1.2E-13 4.1E-18 131.3 15.3 135 90-244 6-164 (453)
25 2e5v_A L-aspartate oxidase; ar 99.5 1.2E-13 3.9E-18 132.2 14.4 135 92-243 1-177 (472)
26 2qa1_A PGAE, polyketide oxygen 99.5 3.7E-13 1.3E-17 129.6 17.0 142 89-256 10-174 (500)
27 2qa2_A CABE, polyketide oxygen 99.5 4.2E-13 1.4E-17 129.1 17.2 142 89-256 11-175 (499)
28 3nyc_A D-arginine dehydrogenas 99.5 1.4E-13 4.7E-18 127.1 13.3 135 89-242 8-209 (381)
29 3nlc_A Uncharacterized protein 99.5 9.2E-14 3.2E-18 134.6 11.9 149 90-257 107-289 (549)
30 3nix_A Flavoprotein/dehydrogen 99.5 8.1E-13 2.8E-17 123.9 17.0 137 90-242 5-166 (421)
31 1y56_B Sarcosine oxidase; dehy 99.5 4.6E-13 1.6E-17 124.0 13.9 136 90-242 5-205 (382)
32 3ps9_A TRNA 5-methylaminomethy 99.5 5.8E-13 2E-17 132.8 15.6 137 90-243 272-474 (676)
33 3dje_A Fructosyl amine: oxygen 99.5 6.8E-13 2.3E-17 125.3 15.0 137 90-242 6-221 (438)
34 3da1_A Glycerol-3-phosphate de 99.5 3.3E-13 1.1E-17 131.6 12.8 142 89-241 17-231 (561)
35 2x3n_A Probable FAD-dependent 99.5 5.8E-13 2E-17 124.2 14.0 131 90-242 6-166 (399)
36 3ihg_A RDME; flavoenzyme, anth 99.5 8.8E-13 3E-17 127.9 15.4 132 90-242 5-183 (535)
37 3rp8_A Flavoprotein monooxygen 99.4 8.5E-13 2.9E-17 123.5 14.3 131 89-245 22-184 (407)
38 3i3l_A Alkylhalidase CMLS; fla 99.4 9.9E-13 3.4E-17 128.9 14.6 132 90-242 23-188 (591)
39 2zxi_A TRNA uridine 5-carboxym 99.4 1.3E-12 4.5E-17 127.4 14.8 137 90-242 27-180 (637)
40 2gag_B Heterotetrameric sarcos 99.4 7.4E-13 2.5E-17 123.4 12.6 136 90-242 21-230 (405)
41 3fmw_A Oxygenase; mithramycin, 99.4 6.6E-13 2.3E-17 129.7 12.3 141 89-256 48-216 (570)
42 3alj_A 2-methyl-3-hydroxypyrid 99.4 1.7E-12 5.9E-17 120.3 14.3 126 90-242 11-160 (379)
43 1k0i_A P-hydroxybenzoate hydro 99.4 5E-13 1.7E-17 124.4 10.2 136 90-245 2-166 (394)
44 1ryi_A Glycine oxidase; flavop 99.4 1.2E-12 4.2E-17 121.0 12.6 136 89-242 16-219 (382)
45 3ces_A MNMG, tRNA uridine 5-ca 99.4 1.8E-12 6.2E-17 126.9 14.2 138 89-242 27-181 (651)
46 3pvc_A TRNA 5-methylaminomethy 99.4 2E-12 6.7E-17 129.2 14.8 137 90-243 264-470 (689)
47 2gmh_A Electron transfer flavo 99.4 1.1E-12 3.6E-17 128.6 12.6 146 90-244 35-219 (584)
48 2oln_A NIKD protein; flavoprot 99.4 1E-12 3.5E-17 122.4 11.3 134 90-241 4-207 (397)
49 3cp8_A TRNA uridine 5-carboxym 99.4 5.3E-12 1.8E-16 123.5 15.6 137 90-242 21-174 (641)
50 2r0c_A REBC; flavin adenine di 99.4 6.4E-12 2.2E-16 122.3 15.4 141 89-256 25-205 (549)
51 3ka7_A Oxidoreductase; structu 99.4 9.2E-12 3.1E-16 116.8 15.9 39 91-130 1-39 (425)
52 2xdo_A TETX2 protein; tetracyc 99.4 4.1E-12 1.4E-16 118.6 12.9 138 85-245 21-185 (398)
53 2vou_A 2,6-dihydroxypyridine h 99.4 1.3E-11 4.3E-16 115.2 16.2 128 90-242 5-153 (397)
54 2bry_A NEDD9 interacting prote 99.4 2.1E-12 7.3E-17 124.1 11.2 135 89-244 91-232 (497)
55 2gf3_A MSOX, monomeric sarcosi 99.4 7.8E-12 2.7E-16 115.8 14.3 134 90-241 3-204 (389)
56 2qcu_A Aerobic glycerol-3-phos 99.4 9.9E-12 3.4E-16 119.6 15.4 140 90-241 3-209 (501)
57 3o0h_A Glutathione reductase; 99.4 3.6E-12 1.2E-16 122.1 12.0 46 90-137 26-71 (484)
58 3c96_A Flavin-containing monoo 99.4 1.2E-11 4E-16 115.9 15.2 134 90-242 4-169 (410)
59 3dgh_A TRXR-1, thioredoxin red 99.3 3.5E-12 1.2E-16 122.2 11.7 49 89-138 8-65 (483)
60 4a9w_A Monooxygenase; baeyer-v 99.3 1.1E-12 3.7E-17 119.6 7.6 130 90-242 3-132 (357)
61 2dkh_A 3-hydroxybenzoate hydro 99.3 1.3E-11 4.3E-16 122.3 15.7 147 90-255 32-219 (639)
62 4fk1_A Putative thioredoxin re 99.3 6.2E-12 2.1E-16 113.0 11.4 113 89-242 5-117 (304)
63 1pj5_A N,N-dimethylglycine oxi 99.3 9.9E-12 3.4E-16 126.6 13.9 136 90-242 4-207 (830)
64 2rgh_A Alpha-glycerophosphate 99.3 3.9E-11 1.3E-15 117.2 17.5 141 90-241 32-249 (571)
65 2uzz_A N-methyl-L-tryptophan o 99.3 6.9E-12 2.4E-16 115.5 11.3 135 90-242 2-204 (372)
66 3lxd_A FAD-dependent pyridine 99.3 1.2E-11 4E-16 116.2 12.9 116 172-318 196-315 (415)
67 4dgk_A Phytoene dehydrogenase; 99.3 1.3E-11 4.6E-16 118.3 13.4 57 170-241 221-277 (501)
68 3gwf_A Cyclohexanone monooxyge 99.3 2E-11 6.7E-16 118.5 14.5 131 90-243 8-148 (540)
69 4gcm_A TRXR, thioredoxin reduc 99.3 5.8E-12 2E-16 113.4 10.0 110 90-241 6-115 (312)
70 4dna_A Probable glutathione re 99.3 1.1E-11 3.8E-16 118.0 12.0 46 90-137 5-50 (463)
71 2ywl_A Thioredoxin reductase r 99.3 7.4E-12 2.5E-16 103.6 9.0 146 91-296 2-147 (180)
72 2gv8_A Monooxygenase; FMO, FAD 99.3 3.3E-11 1.1E-15 114.2 14.5 140 90-243 6-178 (447)
73 3c4n_A Uncharacterized protein 99.3 5.4E-12 1.8E-16 118.1 8.8 136 90-242 36-236 (405)
74 3qfa_A Thioredoxin reductase 1 99.3 8.9E-12 3E-16 120.4 10.6 137 89-242 31-185 (519)
75 3uox_A Otemo; baeyer-villiger 99.3 1.7E-11 5.7E-16 119.2 11.9 134 89-242 8-147 (545)
76 3dgz_A Thioredoxin reductase 2 99.3 1.2E-11 4.2E-16 118.5 10.3 136 90-242 6-159 (488)
77 4a5l_A Thioredoxin reductase; 99.3 8.3E-12 2.8E-16 112.2 8.6 118 90-242 4-121 (314)
78 2pyx_A Tryptophan halogenase; 99.3 7.6E-11 2.6E-15 114.1 15.7 65 165-244 170-235 (526)
79 3lzw_A Ferredoxin--NADP reduct 99.3 2E-11 6.9E-16 110.2 10.7 116 90-241 7-122 (332)
80 3ic9_A Dihydrolipoamide dehydr 99.3 5E-11 1.7E-15 114.4 14.0 47 90-138 8-54 (492)
81 3qvp_A Glucose oxidase; oxidor 99.3 2.4E-11 8.2E-16 118.6 11.6 57 177-243 233-294 (583)
82 1pn0_A Phenol 2-monooxygenase; 99.3 5.2E-11 1.8E-15 118.3 14.3 104 90-201 8-152 (665)
83 3ab1_A Ferredoxin--NADP reduct 99.3 3E-11 1E-15 110.9 11.6 118 90-242 14-131 (360)
84 4b1b_A TRXR, thioredoxin reduc 99.3 2.6E-11 8.9E-16 117.5 11.6 138 90-242 42-197 (542)
85 3axb_A Putative oxidoreductase 99.2 3.2E-11 1.1E-15 114.1 12.1 58 168-241 179-253 (448)
86 3s5w_A L-ornithine 5-monooxyge 99.2 2.1E-11 7.3E-16 115.8 10.5 137 89-242 29-192 (463)
87 3f8d_A Thioredoxin reductase ( 99.2 5.7E-11 1.9E-15 106.7 12.4 111 90-242 15-125 (323)
88 2aqj_A Tryptophan halogenase, 99.2 8.6E-11 2.9E-15 114.0 14.1 64 165-244 160-224 (538)
89 4ap3_A Steroid monooxygenase; 99.2 6.5E-11 2.2E-15 115.1 13.1 130 90-242 21-159 (549)
90 2weu_A Tryptophan 5-halogenase 99.2 7.3E-11 2.5E-15 113.7 12.8 64 165-244 168-232 (511)
91 1yvv_A Amine oxidase, flavin-c 99.2 5.8E-11 2E-15 107.6 11.4 132 90-240 2-160 (336)
92 4hb9_A Similarities with proba 99.2 1.3E-10 4.4E-15 108.0 14.0 34 92-126 3-36 (412)
93 3urh_A Dihydrolipoyl dehydroge 99.2 5.1E-11 1.7E-15 114.3 11.1 134 90-241 25-169 (491)
94 1mo9_A ORF3; nucleotide bindin 99.2 2.1E-10 7E-15 111.0 15.0 46 90-136 43-88 (523)
95 1ges_A Glutathione reductase; 99.2 3.7E-11 1.3E-15 114.1 9.6 47 90-138 4-50 (450)
96 2q0l_A TRXR, thioredoxin reduc 99.2 1.5E-10 5.2E-15 103.8 13.1 112 91-242 2-114 (311)
97 3k7m_X 6-hydroxy-L-nicotine ox 99.2 1.1E-10 3.6E-15 109.8 12.3 40 91-131 2-41 (431)
98 2zbw_A Thioredoxin reductase; 99.2 9.8E-11 3.3E-15 106.2 11.7 116 90-241 5-120 (335)
99 3nrn_A Uncharacterized protein 99.2 1.5E-10 5.2E-15 108.5 13.4 38 92-130 2-39 (421)
100 2q7v_A Thioredoxin reductase; 99.2 7.4E-11 2.5E-15 106.7 10.7 114 90-242 8-123 (325)
101 3itj_A Thioredoxin reductase 1 99.2 4.6E-11 1.6E-15 108.2 9.2 117 90-242 22-142 (338)
102 2e4g_A Tryptophan halogenase; 99.2 2.4E-10 8.3E-15 111.2 14.8 65 165-244 189-254 (550)
103 1w4x_A Phenylacetone monooxyge 99.2 2.9E-10 9.8E-15 110.4 15.2 130 90-243 16-155 (542)
104 3q9t_A Choline dehydrogenase a 99.2 4.7E-11 1.6E-15 116.5 9.4 51 182-242 217-270 (577)
105 1ojt_A Surface protein; redox- 99.2 3E-11 1E-15 115.6 7.5 144 90-242 6-160 (482)
106 3cty_A Thioredoxin reductase; 99.2 3.1E-10 1.1E-14 102.2 13.8 111 90-242 16-126 (319)
107 3l8k_A Dihydrolipoyl dehydroge 99.2 1.9E-11 6.6E-16 116.5 6.1 134 90-241 4-143 (466)
108 2xve_A Flavin-containing monoo 99.2 8E-11 2.7E-15 112.2 10.0 140 91-243 3-167 (464)
109 3qj4_A Renalase; FAD/NAD(P)-bi 99.2 1.5E-10 5.2E-15 105.5 11.0 129 91-239 2-162 (342)
110 3fbs_A Oxidoreductase; structu 99.1 4.2E-10 1.4E-14 99.9 12.7 111 90-242 2-112 (297)
111 3dk9_A Grase, GR, glutathione 99.1 1.2E-10 4.1E-15 111.3 9.1 131 90-242 20-160 (478)
112 1xdi_A RV3303C-LPDA; reductase 99.1 3.3E-10 1.1E-14 108.9 12.0 47 90-137 2-50 (499)
113 1dxl_A Dihydrolipoamide dehydr 99.1 7.5E-11 2.6E-15 112.4 7.4 135 90-242 6-151 (470)
114 1vdc_A NTR, NADPH dependent th 99.1 1.3E-10 4.6E-15 105.2 8.1 113 90-242 8-124 (333)
115 3d1c_A Flavin-containing putat 99.1 2.4E-10 8E-15 105.0 9.9 130 90-242 4-143 (369)
116 1v59_A Dihydrolipoamide dehydr 99.1 1.7E-10 5.7E-15 110.3 8.8 131 90-242 5-157 (478)
117 3r9u_A Thioredoxin reductase; 99.1 3.4E-10 1.1E-14 101.4 10.2 111 90-241 4-117 (315)
118 1fl2_A Alkyl hydroperoxide red 99.1 6.4E-10 2.2E-14 99.6 11.7 113 90-242 1-115 (310)
119 3lad_A Dihydrolipoamide dehydr 99.1 1.6E-10 5.6E-15 110.3 8.3 135 90-241 3-153 (476)
120 1ebd_A E3BD, dihydrolipoamide 99.1 7E-10 2.4E-14 105.3 12.5 132 90-242 3-145 (455)
121 2eq6_A Pyruvate dehydrogenase 99.1 3E-10 1E-14 108.1 9.8 129 90-242 6-143 (464)
122 3t37_A Probable dehydrogenase; 99.1 9.5E-11 3.2E-15 113.2 6.4 56 176-242 216-271 (526)
123 2qae_A Lipoamide, dihydrolipoy 99.1 7.1E-11 2.4E-15 112.6 5.4 134 90-241 2-147 (468)
124 1trb_A Thioredoxin reductase; 99.1 4.6E-10 1.6E-14 100.9 10.4 112 90-242 5-116 (320)
125 1zmd_A Dihydrolipoyl dehydroge 99.1 7.5E-11 2.6E-15 112.6 5.0 131 90-242 6-152 (474)
126 1lvl_A Dihydrolipoamide dehydr 99.1 2.5E-10 8.6E-15 108.5 8.6 130 90-242 5-146 (458)
127 2a87_A TRXR, TR, thioredoxin r 99.1 3.1E-10 1E-14 103.1 8.8 112 90-242 14-126 (335)
128 2bcg_G Secretory pathway GDP d 99.1 1.2E-09 4.2E-14 103.6 13.0 41 89-130 10-50 (453)
129 4gde_A UDP-galactopyranose mut 99.1 2.2E-10 7.4E-15 110.0 7.8 40 90-130 10-50 (513)
130 1onf_A GR, grase, glutathione 99.0 1.7E-10 5.8E-15 110.9 6.2 51 90-142 2-52 (500)
131 1zk7_A HGII, reductase, mercur 99.0 1.2E-09 4.3E-14 103.9 12.1 52 90-143 4-55 (467)
132 3nks_A Protoporphyrinogen oxid 99.0 6.8E-10 2.3E-14 105.7 10.2 40 91-131 3-44 (477)
133 1fec_A Trypanothione reductase 99.0 1.7E-10 5.9E-15 110.6 5.2 54 90-144 3-65 (490)
134 2hqm_A GR, grase, glutathione 99.0 1.7E-10 5.9E-15 110.3 5.2 52 90-143 11-62 (479)
135 2a8x_A Dihydrolipoyl dehydroge 99.0 9.2E-10 3.1E-14 104.7 10.2 129 90-242 3-146 (464)
136 3p1w_A Rabgdi protein; GDI RAB 99.0 1.8E-09 6.3E-14 102.5 11.5 40 90-130 20-59 (475)
137 2yqu_A 2-oxoglutarate dehydrog 99.0 5.8E-10 2E-14 105.8 7.9 51 91-142 2-52 (455)
138 3i6d_A Protoporphyrinogen oxid 99.0 1.6E-09 5.6E-14 102.5 11.0 40 90-130 5-50 (470)
139 1hyu_A AHPF, alkyl hydroperoxi 99.0 2.7E-09 9.1E-14 103.1 12.0 114 89-242 211-326 (521)
140 2r9z_A Glutathione amide reduc 99.0 2.2E-09 7.4E-14 102.2 10.9 129 90-242 4-142 (463)
141 2wpf_A Trypanothione reductase 99.0 3.1E-10 1.1E-14 109.0 4.9 138 90-241 7-166 (495)
142 2ivd_A PPO, PPOX, protoporphyr 99.0 4.2E-09 1.5E-13 100.2 12.5 45 85-130 11-55 (478)
143 1c0p_A D-amino acid oxidase; a 99.0 1.1E-09 3.7E-14 100.6 8.0 37 90-127 6-42 (363)
144 3kkj_A Amine oxidase, flavin-c 99.0 4.7E-10 1.6E-14 96.9 5.1 40 90-130 2-41 (336)
145 3fg2_P Putative rubredoxin red 98.9 3.7E-09 1.3E-13 98.7 11.4 138 91-297 143-280 (404)
146 3c4a_A Probable tryptophan hyd 98.9 2.2E-10 7.6E-15 106.2 2.8 124 92-243 2-144 (381)
147 2vvm_A Monoamine oxidase N; FA 98.9 1.3E-08 4.5E-13 97.3 14.2 40 90-130 39-78 (495)
148 2x8g_A Thioredoxin glutathione 98.9 2.9E-09 1E-13 104.5 9.8 136 89-242 106-261 (598)
149 3fim_B ARYL-alcohol oxidase; A 98.9 1.7E-09 5.7E-14 105.3 7.9 37 90-126 2-38 (566)
150 3g3e_A D-amino-acid oxidase; F 98.9 2.9E-10 9.9E-15 104.0 2.3 41 92-133 2-48 (351)
151 1s3e_A Amine oxidase [flavin-c 98.9 9.4E-09 3.2E-13 99.1 12.7 40 90-130 4-43 (520)
152 4b63_A L-ornithine N5 monooxyg 98.9 1.2E-08 4.3E-13 97.9 13.1 137 90-241 39-213 (501)
153 3pl8_A Pyranose 2-oxidase; sub 98.9 5.5E-09 1.9E-13 102.9 10.2 39 90-129 46-84 (623)
154 1y56_A Hypothetical protein PH 98.8 5.9E-09 2E-13 100.0 8.8 111 90-241 108-218 (493)
155 2gag_A Heterotetrameric sarcos 98.8 1.7E-08 5.8E-13 104.2 12.6 124 90-241 128-252 (965)
156 3cgb_A Pyridine nucleotide-dis 98.8 1.6E-08 5.5E-13 96.6 10.9 138 90-297 186-323 (480)
157 1trb_A Thioredoxin reductase; 98.8 6.6E-08 2.3E-12 86.7 14.1 101 91-242 146-247 (320)
158 1nhp_A NADH peroxidase; oxidor 98.8 3.6E-08 1.2E-12 93.2 12.6 98 90-242 149-246 (447)
159 1kdg_A CDH, cellobiose dehydro 98.8 8.3E-09 2.8E-13 100.2 8.2 59 175-242 200-261 (546)
160 3ef6_A Toluene 1,2-dioxygenase 98.8 7.4E-09 2.5E-13 96.9 7.3 136 91-296 144-279 (410)
161 3g5s_A Methylenetetrahydrofola 98.8 1.8E-08 6.1E-13 92.6 9.3 104 91-197 2-124 (443)
162 3itj_A Thioredoxin reductase 1 98.8 7E-08 2.4E-12 87.0 13.3 99 90-242 173-271 (338)
163 3lov_A Protoporphyrinogen oxid 98.8 4.6E-08 1.6E-12 92.9 12.7 39 90-129 4-44 (475)
164 2v3a_A Rubredoxin reductase; a 98.8 4.1E-08 1.4E-12 91.0 11.9 135 91-295 146-280 (384)
165 4gut_A Lysine-specific histone 98.8 1.1E-08 3.7E-13 103.1 8.5 38 90-128 336-373 (776)
166 1q1r_A Putidaredoxin reductase 98.8 7.6E-08 2.6E-12 90.6 13.5 137 91-296 150-288 (431)
167 2jbv_A Choline oxidase; alcoho 98.8 2.6E-08 8.8E-13 96.7 10.4 57 176-241 214-272 (546)
168 3ihm_A Styrene monooxygenase A 98.8 4.6E-09 1.6E-13 99.0 4.7 34 90-124 22-55 (430)
169 3k30_A Histamine dehydrogenase 98.7 5.4E-09 1.8E-13 104.4 5.1 41 90-131 391-431 (690)
170 3iwa_A FAD-dependent pyridine 98.7 2.3E-08 7.9E-13 95.2 9.3 120 91-241 4-124 (472)
171 2cdu_A NADPH oxidase; flavoenz 98.7 1.1E-07 3.7E-12 90.1 13.6 99 91-243 150-248 (452)
172 3kd9_A Coenzyme A disulfide re 98.7 1.8E-08 6.3E-13 95.3 8.2 110 90-241 3-113 (449)
173 2gqw_A Ferredoxin reductase; f 98.7 4E-08 1.4E-12 91.9 9.9 133 91-297 146-278 (408)
174 3ab1_A Ferredoxin--NADP reduct 98.7 1.4E-07 4.9E-12 86.2 13.5 138 91-295 164-301 (360)
175 1ebd_A E3BD, dihydrolipoamide 98.7 1.7E-07 5.7E-12 88.8 14.2 100 91-242 171-270 (455)
176 1gpe_A Protein (glucose oxidas 98.7 6E-08 2E-12 94.9 11.3 54 180-243 240-298 (587)
177 2eq6_A Pyruvate dehydrogenase 98.7 2.8E-07 9.5E-12 87.6 15.4 103 91-243 170-272 (464)
178 1ju2_A HydroxynitrIle lyase; f 98.7 1.4E-08 4.7E-13 98.4 6.4 34 90-125 26-59 (536)
179 3oc4_A Oxidoreductase, pyridin 98.7 2.7E-08 9.1E-13 94.3 8.2 112 91-242 3-115 (452)
180 2q0l_A TRXR, thioredoxin reduc 98.7 4.5E-07 1.6E-11 80.9 15.7 99 90-242 143-241 (311)
181 3ntd_A FAD-dependent pyridine 98.7 6.6E-08 2.2E-12 94.1 10.9 137 91-296 152-307 (565)
182 3cgb_A Pyridine nucleotide-dis 98.7 2.6E-08 9E-13 95.1 7.8 115 91-242 37-152 (480)
183 1v59_A Dihydrolipoamide dehydr 98.7 2.5E-07 8.5E-12 88.1 14.5 103 91-242 184-287 (478)
184 3iwa_A FAD-dependent pyridine 98.7 6.2E-08 2.1E-12 92.2 10.3 139 91-296 160-298 (472)
185 3oc4_A Oxidoreductase, pyridin 98.7 3.4E-07 1.2E-11 86.7 15.2 98 91-243 148-245 (452)
186 2yqu_A 2-oxoglutarate dehydrog 98.7 1.4E-07 4.8E-12 89.3 12.4 98 91-243 168-265 (455)
187 3klj_A NAD(FAD)-dependent dehy 98.7 4.3E-08 1.5E-12 91.0 8.3 107 90-241 9-115 (385)
188 1fl2_A Alkyl hydroperoxide red 98.7 4E-07 1.4E-11 81.2 14.2 97 91-241 145-241 (310)
189 3cty_A Thioredoxin reductase; 98.7 3.5E-07 1.2E-11 82.1 13.8 136 91-295 156-291 (319)
190 2bc0_A NADH oxidase; flavoprot 98.7 2E-07 6.8E-12 89.2 12.8 97 91-242 195-291 (490)
191 1vdc_A NTR, NADPH dependent th 98.6 4.3E-07 1.5E-11 81.9 14.3 98 91-242 160-259 (333)
192 2v3a_A Rubredoxin reductase; a 98.6 4.3E-08 1.5E-12 90.8 7.5 108 90-242 4-113 (384)
193 2bc0_A NADH oxidase; flavoprot 98.6 6E-08 2.1E-12 92.8 8.6 111 90-241 35-148 (490)
194 1q1r_A Putidaredoxin reductase 98.6 9.7E-08 3.3E-12 89.9 9.8 109 90-242 4-114 (431)
195 2zbw_A Thioredoxin reductase; 98.6 3.8E-07 1.3E-11 82.3 13.3 138 91-295 153-290 (335)
196 1onf_A GR, grase, glutathione 98.6 3.3E-07 1.1E-11 88.0 13.4 138 91-295 177-315 (500)
197 3ics_A Coenzyme A-disulfide re 98.6 8.1E-08 2.8E-12 94.0 9.3 115 90-241 36-151 (588)
198 3r9u_A Thioredoxin reductase; 98.6 6.3E-07 2.1E-11 79.8 14.2 97 91-242 148-244 (315)
199 3kd9_A Coenzyme A disulfide re 98.6 1.3E-07 4.5E-12 89.4 10.2 136 91-296 149-284 (449)
200 3urh_A Dihydrolipoyl dehydroge 98.6 7E-07 2.4E-11 85.4 15.3 103 91-243 199-301 (491)
201 1xhc_A NADH oxidase /nitrite r 98.6 1.1E-07 3.8E-12 87.6 9.3 105 90-241 8-112 (367)
202 1zmd_A Dihydrolipoyl dehydroge 98.6 5.4E-07 1.9E-11 85.7 14.3 105 91-243 179-283 (474)
203 2vdc_G Glutamate synthase [NAD 98.6 2.1E-08 7.1E-13 95.2 4.2 40 89-129 121-160 (456)
204 2r9z_A Glutathione amide reduc 98.6 3.2E-07 1.1E-11 87.1 12.3 97 91-242 167-264 (463)
205 2q7v_A Thioredoxin reductase; 98.6 9.4E-07 3.2E-11 79.5 14.8 97 91-242 153-249 (325)
206 3ics_A Coenzyme A-disulfide re 98.6 1.4E-07 4.7E-12 92.4 9.7 135 91-296 188-322 (588)
207 1ojt_A Surface protein; redox- 98.6 6E-07 2E-11 85.7 13.8 101 91-242 186-286 (482)
208 2a8x_A Dihydrolipoyl dehydroge 98.6 6.2E-07 2.1E-11 85.1 13.7 101 91-243 172-272 (464)
209 2hqm_A GR, grase, glutathione 98.6 3.8E-07 1.3E-11 87.0 12.2 99 91-242 186-285 (479)
210 3h8l_A NADH oxidase; membrane 98.6 2.1E-07 7.3E-12 86.7 10.2 108 92-242 3-113 (409)
211 1dxl_A Dihydrolipoamide dehydr 98.6 3.1E-07 1.1E-11 87.3 11.2 102 91-242 178-279 (470)
212 3f8d_A Thioredoxin reductase ( 98.6 1.3E-06 4.6E-11 77.9 14.8 138 90-296 154-291 (323)
213 2cdu_A NADPH oxidase; flavoenz 98.6 1.3E-07 4.4E-12 89.5 8.3 115 91-242 1-117 (452)
214 1nhp_A NADH peroxidase; oxidor 98.5 3.1E-07 1.1E-11 86.7 10.8 112 92-241 2-114 (447)
215 1n4w_A CHOD, cholesterol oxida 98.5 1.3E-07 4.4E-12 90.9 8.1 34 90-124 5-38 (504)
216 3ntd_A FAD-dependent pyridine 98.5 2.5E-07 8.6E-12 89.9 9.9 114 91-241 2-116 (565)
217 1ps9_A 2,4-dienoyl-COA reducta 98.5 8.4E-08 2.9E-12 95.4 6.5 40 90-130 373-412 (671)
218 2qae_A Lipoamide, dihydrolipoy 98.5 1.2E-06 4E-11 83.3 14.1 102 91-243 175-277 (468)
219 3sx6_A Sulfide-quinone reducta 98.5 1.6E-07 5.3E-12 88.6 8.0 104 91-241 5-111 (437)
220 4a5l_A Thioredoxin reductase; 98.5 1.9E-06 6.6E-11 76.8 14.4 135 91-295 153-287 (314)
221 1m6i_A Programmed cell death p 98.5 1.2E-06 4.2E-11 83.8 13.8 99 91-243 181-283 (493)
222 1zk7_A HGII, reductase, mercur 98.5 1.4E-06 4.9E-11 82.7 13.9 96 91-243 177-272 (467)
223 1lvl_A Dihydrolipoamide dehydr 98.5 5.1E-07 1.8E-11 85.6 10.6 98 91-243 172-269 (458)
224 3lad_A Dihydrolipoamide dehydr 98.5 1.7E-06 5.9E-11 82.2 14.2 99 91-241 181-279 (476)
225 1fec_A Trypanothione reductase 98.5 7.5E-07 2.6E-11 85.2 11.6 99 91-242 188-288 (490)
226 4eqs_A Coenzyme A disulfide re 98.5 2.8E-07 9.5E-12 87.0 8.3 112 92-241 2-115 (437)
227 2gqw_A Ferredoxin reductase; f 98.5 3.3E-07 1.1E-11 85.6 8.7 105 90-242 7-113 (408)
228 3dgz_A Thioredoxin reductase 2 98.5 1.9E-06 6.4E-11 82.3 14.1 101 91-241 186-286 (488)
229 2wpf_A Trypanothione reductase 98.5 9.2E-07 3.1E-11 84.7 11.8 99 91-242 192-292 (495)
230 3fg2_P Putative rubredoxin red 98.5 4.8E-07 1.6E-11 84.3 9.6 106 91-241 2-109 (404)
231 2a87_A TRXR, TR, thioredoxin r 98.5 8E-07 2.7E-11 80.4 10.8 98 90-242 155-252 (335)
232 4eqs_A Coenzyme A disulfide re 98.5 3.2E-07 1.1E-11 86.5 8.4 134 91-297 148-281 (437)
233 1hyu_A AHPF, alkyl hydroperoxi 98.4 1.6E-06 5.6E-11 83.5 13.1 97 91-241 356-452 (521)
234 3ef6_A Toluene 1,2-dioxygenase 98.4 3E-07 1E-11 86.0 7.7 106 91-241 3-110 (410)
235 3dk9_A Grase, GR, glutathione 98.4 2.4E-06 8.1E-11 81.4 14.0 103 91-242 188-293 (478)
236 1xhc_A NADH oxidase /nitrite r 98.4 9.2E-07 3.2E-11 81.4 10.8 129 91-296 144-272 (367)
237 3h28_A Sulfide-quinone reducta 98.4 2.6E-07 8.8E-12 86.9 7.2 104 91-241 3-108 (430)
238 4b1b_A TRXR, thioredoxin reduc 98.4 1.4E-06 4.8E-11 84.2 12.4 96 91-242 224-319 (542)
239 2b9w_A Putative aminooxidase; 98.4 1.9E-07 6.3E-12 87.4 5.7 40 90-130 6-46 (424)
240 3lzw_A Ferredoxin--NADP reduct 98.4 1.9E-06 6.5E-11 77.3 11.8 134 91-295 155-288 (332)
241 1v0j_A UDP-galactopyranose mut 98.4 1.6E-07 5.5E-12 87.5 4.7 42 90-131 7-48 (399)
242 1rsg_A FMS1 protein; FAD bindi 98.4 1.3E-07 4.5E-12 91.0 4.2 40 90-130 8-48 (516)
243 1gte_A Dihydropyrimidine dehyd 98.4 1E-07 3.4E-12 99.1 3.5 39 90-129 187-226 (1025)
244 3klj_A NAD(FAD)-dependent dehy 98.4 9.2E-08 3.2E-12 88.8 2.5 123 91-296 147-269 (385)
245 3s5w_A L-ornithine 5-monooxyge 98.4 9E-06 3.1E-10 76.8 16.0 136 90-243 227-378 (463)
246 1cjc_A Protein (adrenodoxin re 98.4 6.7E-08 2.3E-12 91.8 1.2 38 90-128 6-45 (460)
247 3l8k_A Dihydrolipoyl dehydroge 98.4 3.8E-06 1.3E-10 79.7 13.2 138 91-295 173-311 (466)
248 1m6i_A Programmed cell death p 98.4 1.6E-07 5.3E-12 90.1 3.5 128 90-242 11-144 (493)
249 2jae_A L-amino acid oxidase; o 98.3 3.5E-07 1.2E-11 87.2 5.6 40 90-130 11-50 (489)
250 3hdq_A UDP-galactopyranose mut 98.3 3.2E-07 1.1E-11 85.3 5.1 41 90-131 29-69 (397)
251 3hyw_A Sulfide-quinone reducta 98.3 7.4E-07 2.5E-11 83.8 7.4 104 92-241 4-108 (430)
252 3qfa_A Thioredoxin reductase 1 98.3 6.5E-06 2.2E-10 79.3 14.1 101 91-242 211-315 (519)
253 4gcm_A TRXR, thioredoxin reduc 98.3 1.2E-05 4.1E-10 71.7 15.0 135 91-294 146-280 (312)
254 2yg5_A Putrescine oxidase; oxi 98.3 3.2E-07 1.1E-11 86.5 4.5 40 90-130 5-44 (453)
255 2e1m_A L-glutamate oxidase; L- 98.3 4.6E-07 1.6E-11 83.6 5.4 41 90-131 44-85 (376)
256 1i8t_A UDP-galactopyranose mut 98.3 3.8E-07 1.3E-11 84.0 4.9 40 91-131 2-41 (367)
257 4g6h_A Rotenone-insensitive NA 98.2 4E-06 1.4E-10 80.4 10.5 123 90-242 42-169 (502)
258 4dsg_A UDP-galactopyranose mut 98.2 8.6E-07 2.9E-11 84.7 5.4 42 89-131 8-50 (484)
259 3vrd_B FCCB subunit, flavocyto 98.2 2.5E-06 8.7E-11 79.1 8.2 103 92-241 4-107 (401)
260 1sez_A Protoporphyrinogen oxid 98.2 9.9E-07 3.4E-11 84.4 5.6 40 90-130 13-52 (504)
261 1lqt_A FPRA; NADP+ derivative, 98.2 2.9E-07 9.9E-12 87.3 1.6 40 90-129 3-48 (456)
262 2bi7_A UDP-galactopyranose mut 98.2 1.2E-06 4.1E-11 81.1 5.6 41 90-131 3-43 (384)
263 1d5t_A Guanine nucleotide diss 98.2 1.4E-06 4.7E-11 82.0 5.7 40 90-130 6-45 (433)
264 2x8g_A Thioredoxin glutathione 98.2 3.4E-05 1.2E-09 75.5 15.4 99 91-241 287-394 (598)
265 3d1c_A Flavin-containing putat 98.1 3.7E-05 1.3E-09 70.0 13.3 105 91-242 167-272 (369)
266 4g6h_A Rotenone-insensitive NA 98.1 3.6E-05 1.2E-09 73.8 13.1 99 92-242 219-332 (502)
267 2iid_A L-amino-acid oxidase; f 98.1 2.3E-06 8E-11 81.7 4.6 40 90-130 33-72 (498)
268 1cjc_A Protein (adrenodoxin re 98.0 7.6E-05 2.6E-09 70.7 13.9 58 184-243 270-334 (460)
269 1b37_A Protein (polyamine oxid 98.0 3.9E-06 1.3E-10 79.7 4.7 40 90-130 4-44 (472)
270 3fbs_A Oxidoreductase; structu 98.0 7.5E-06 2.6E-10 72.1 5.8 126 90-295 141-268 (297)
271 2vdc_G Glutamate synthase [NAD 97.9 4.6E-05 1.6E-09 72.1 10.0 106 90-240 264-376 (456)
272 1gte_A Dihydropyrimidine dehyd 97.9 5.7E-05 2E-09 78.5 11.3 104 92-241 334-441 (1025)
273 1o94_A Tmadh, trimethylamine d 97.9 1.2E-05 4E-10 80.7 5.6 41 90-131 389-429 (729)
274 2z3y_A Lysine-specific histone 97.8 1.5E-05 5E-10 79.1 5.1 39 90-129 107-145 (662)
275 1lqt_A FPRA; NADP+ derivative, 97.8 0.00015 5.1E-09 68.6 11.5 57 184-243 265-327 (456)
276 4fk1_A Putative thioredoxin re 97.8 3.1E-05 1.1E-09 68.9 6.1 128 91-295 147-275 (304)
277 2gag_A Heterotetrameric sarcos 97.7 6.6E-05 2.3E-09 77.5 9.2 97 91-241 285-382 (965)
278 2xag_A Lysine-specific histone 97.7 2.3E-05 8E-10 79.5 5.5 39 90-129 278-316 (852)
279 2xve_A Flavin-containing monoo 97.7 0.00016 5.6E-09 68.4 9.7 34 91-125 198-231 (464)
280 1vg0_A RAB proteins geranylger 97.6 4.3E-05 1.5E-09 74.9 5.2 40 90-130 8-47 (650)
281 1coy_A Cholesterol oxidase; ox 97.6 4.4E-05 1.5E-09 73.2 4.5 35 89-124 10-44 (507)
282 3ayj_A Pro-enzyme of L-phenyla 97.3 6.4E-05 2.2E-09 74.6 2.3 36 90-126 56-100 (721)
283 3gwf_A Cyclohexanone monooxyge 97.3 0.0024 8.1E-08 61.6 12.7 35 90-125 178-212 (540)
284 1o94_A Tmadh, trimethylamine d 97.3 0.00053 1.8E-08 68.6 8.1 109 91-242 529-646 (729)
285 3sx6_A Sulfide-quinone reducta 97.3 0.00084 2.9E-08 62.9 9.0 55 177-242 215-269 (437)
286 4a9w_A Monooxygenase; baeyer-v 97.3 0.0008 2.7E-08 60.4 8.5 32 91-124 164-195 (357)
287 3uox_A Otemo; baeyer-villiger 97.0 0.00084 2.9E-08 64.9 6.7 34 91-125 186-219 (545)
288 3h28_A Sulfide-quinone reducta 97.0 0.00069 2.4E-08 63.3 5.6 52 175-242 205-256 (430)
289 2gv8_A Monooxygenase; FMO, FAD 97.0 0.0012 4.1E-08 62.0 7.1 34 90-124 212-246 (447)
290 3h8l_A NADH oxidase; membrane 96.9 0.002 7E-08 59.5 7.6 51 172-242 220-270 (409)
291 4ap3_A Steroid monooxygenase; 96.8 0.0078 2.7E-07 58.1 11.2 35 90-125 191-225 (549)
292 1ps9_A 2,4-dienoyl-COA reducta 96.8 0.0058 2E-07 60.4 10.4 29 90-119 494-522 (671)
293 2g1u_A Hypothetical protein TM 95.3 0.018 6E-07 45.6 4.6 33 91-124 20-52 (155)
294 1y56_A Hypothetical protein PH 95.2 0.029 1E-06 53.2 6.7 45 183-242 269-313 (493)
295 3llv_A Exopolyphosphatase-rela 95.1 0.023 7.8E-07 44.0 4.7 32 92-124 8-39 (141)
296 3fwz_A Inner membrane protein 95.1 0.029 1E-06 43.5 5.2 33 91-124 8-40 (140)
297 1w4x_A Phenylacetone monooxyge 95.0 0.16 5.3E-06 48.8 11.1 34 91-125 187-220 (542)
298 1lss_A TRK system potassium up 94.9 0.029 9.8E-07 43.0 4.6 33 91-124 5-37 (140)
299 1ges_A Glutathione reductase; 94.6 0.029 9.8E-07 52.6 4.8 99 91-243 168-266 (450)
300 4b63_A L-ornithine N5 monooxyg 94.5 0.26 8.9E-06 46.7 11.3 34 91-124 247-281 (501)
301 1id1_A Putative potassium chan 94.5 0.045 1.5E-06 43.0 4.9 32 91-123 4-35 (153)
302 3ic5_A Putative saccharopine d 94.3 0.042 1.4E-06 40.6 4.2 33 91-124 6-39 (118)
303 2hmt_A YUAA protein; RCK, KTN, 94.2 0.041 1.4E-06 42.2 4.1 31 92-123 8-38 (144)
304 3ic9_A Dihydrolipoamide dehydr 93.9 0.05 1.7E-06 51.6 4.8 100 91-242 175-274 (492)
305 1d5t_A Guanine nucleotide diss 93.8 0.059 2E-06 50.2 5.1 58 169-242 233-290 (433)
306 1coy_A Cholesterol oxidase; ox 93.5 0.12 4E-06 49.2 6.6 56 177-242 233-293 (507)
307 3lk7_A UDP-N-acetylmuramoylala 93.4 0.07 2.4E-06 50.1 4.8 33 91-124 10-42 (451)
308 3ado_A Lambda-crystallin; L-gu 93.4 0.057 1.9E-06 48.2 4.0 33 91-124 7-39 (319)
309 3vrd_B FCCB subunit, flavocyto 93.3 0.12 4E-06 47.3 6.1 45 182-241 213-257 (401)
310 3lxd_A FAD-dependent pyridine 92.8 0.1 3.6E-06 48.0 4.9 35 91-126 153-187 (415)
311 3dfz_A SIRC, precorrin-2 dehyd 92.8 0.09 3.1E-06 44.4 4.1 33 90-123 31-63 (223)
312 3l4b_C TRKA K+ channel protien 92.6 0.091 3.1E-06 43.9 3.8 32 92-124 2-33 (218)
313 1kyq_A Met8P, siroheme biosynt 92.5 0.077 2.6E-06 46.3 3.4 34 90-124 13-46 (274)
314 1pzg_A LDH, lactate dehydrogen 92.4 0.11 3.9E-06 46.5 4.5 33 91-124 10-43 (331)
315 1jw9_B Molybdopterin biosynthe 92.0 0.11 3.7E-06 44.6 3.7 34 90-124 31-65 (249)
316 3i83_A 2-dehydropantoate 2-red 92.0 0.14 4.8E-06 45.5 4.6 32 92-124 4-35 (320)
317 1f0y_A HCDH, L-3-hydroxyacyl-C 91.9 0.14 4.9E-06 45.0 4.5 32 92-124 17-48 (302)
318 4e12_A Diketoreductase; oxidor 91.9 0.15 5E-06 44.6 4.5 32 92-124 6-37 (283)
319 4dio_A NAD(P) transhydrogenase 91.8 0.15 5.1E-06 47.0 4.6 34 90-124 190-223 (405)
320 1mo9_A ORF3; nucleotide bindin 91.6 0.16 5.6E-06 48.4 4.8 101 91-243 215-317 (523)
321 2x5o_A UDP-N-acetylmuramoylala 91.5 0.12 4.2E-06 48.2 3.8 34 92-126 7-40 (439)
322 3oj0_A Glutr, glutamyl-tRNA re 91.5 0.13 4.3E-06 39.9 3.3 33 90-123 21-53 (144)
323 3hyw_A Sulfide-quinone reducta 91.4 0.85 2.9E-05 42.1 9.5 50 178-242 207-256 (430)
324 2dpo_A L-gulonate 3-dehydrogen 91.4 0.17 5.7E-06 45.2 4.4 33 91-124 7-39 (319)
325 3hn2_A 2-dehydropantoate 2-red 91.4 0.14 5E-06 45.3 4.0 32 92-124 4-35 (312)
326 2a9f_A Putative malic enzyme ( 91.3 0.16 5.5E-06 46.4 4.2 35 89-124 187-222 (398)
327 2hjr_A Malate dehydrogenase; m 91.2 0.22 7.5E-06 44.6 5.0 33 91-124 15-48 (328)
328 1xdi_A RV3303C-LPDA; reductase 91.1 0.19 6.3E-06 47.6 4.7 97 91-242 183-279 (499)
329 1lld_A L-lactate dehydrogenase 91.0 0.2 6.7E-06 44.4 4.5 33 91-124 8-42 (319)
330 4g65_A TRK system potassium up 90.8 0.19 6.4E-06 47.3 4.3 32 92-124 5-36 (461)
331 1pjc_A Protein (L-alanine dehy 90.8 0.22 7.5E-06 45.2 4.6 33 91-124 168-200 (361)
332 3p2y_A Alanine dehydrogenase/p 90.8 0.16 5.6E-06 46.3 3.7 34 90-124 184-217 (381)
333 1ks9_A KPA reductase;, 2-dehyd 90.6 0.24 8E-06 42.9 4.6 32 92-124 2-33 (291)
334 2raf_A Putative dinucleotide-b 90.6 0.27 9.4E-06 40.8 4.7 34 91-125 20-53 (209)
335 1x13_A NAD(P) transhydrogenase 90.5 0.23 7.7E-06 45.8 4.5 34 90-124 172-205 (401)
336 3ghy_A Ketopantoate reductase 90.4 0.25 8.5E-06 44.2 4.6 31 92-123 5-35 (335)
337 3dgh_A TRXR-1, thioredoxin red 90.3 0.23 7.9E-06 46.7 4.5 102 91-242 188-289 (483)
338 1vl6_A Malate oxidoreductase; 90.2 0.23 7.9E-06 45.3 4.1 34 89-123 191-225 (388)
339 2v6b_A L-LDH, L-lactate dehydr 90.2 0.26 8.9E-06 43.5 4.5 32 92-124 2-35 (304)
340 3o0h_A Glutathione reductase; 90.2 0.27 9.1E-06 46.3 4.8 97 91-242 192-288 (484)
341 3c85_A Putative glutathione-re 90.1 0.19 6.5E-06 40.5 3.3 34 91-124 40-73 (183)
342 1nyt_A Shikimate 5-dehydrogena 90.1 0.27 9.3E-06 42.6 4.5 32 91-123 120-151 (271)
343 1l7d_A Nicotinamide nucleotide 90.1 0.27 9.1E-06 45.0 4.6 34 90-124 172-205 (384)
344 2y0c_A BCEC, UDP-glucose dehyd 90.1 0.26 9E-06 46.5 4.6 34 90-124 8-41 (478)
345 4dna_A Probable glutathione re 90.0 0.28 9.5E-06 45.9 4.8 98 90-242 170-268 (463)
346 3k6j_A Protein F01G10.3, confi 90.0 0.37 1.3E-05 45.2 5.5 34 91-125 55-88 (460)
347 2ew2_A 2-dehydropantoate 2-red 89.8 0.28 9.7E-06 42.9 4.5 32 92-124 5-36 (316)
348 2eez_A Alanine dehydrogenase; 89.7 0.31 1.1E-05 44.3 4.6 33 91-124 167-199 (369)
349 3g17_A Similar to 2-dehydropan 89.6 0.2 6.8E-06 44.0 3.1 32 92-124 4-35 (294)
350 4a7p_A UDP-glucose dehydrogena 89.5 0.34 1.2E-05 45.3 4.9 35 90-125 8-42 (446)
351 3l9w_A Glutathione-regulated p 89.4 0.31 1.1E-05 45.1 4.5 33 91-124 5-37 (413)
352 1zcj_A Peroxisomal bifunctiona 89.4 0.32 1.1E-05 45.7 4.7 32 92-124 39-70 (463)
353 4ezb_A Uncharacterized conserv 89.3 0.44 1.5E-05 42.3 5.3 33 91-124 25-58 (317)
354 3phh_A Shikimate dehydrogenase 89.2 0.4 1.4E-05 41.6 4.7 34 90-124 118-151 (269)
355 3gg2_A Sugar dehydrogenase, UD 89.2 0.32 1.1E-05 45.5 4.5 32 92-124 4-35 (450)
356 3ego_A Probable 2-dehydropanto 89.1 0.39 1.3E-05 42.4 4.8 31 92-124 4-34 (307)
357 4ffl_A PYLC; amino acid, biosy 89.1 0.37 1.3E-05 43.4 4.7 33 92-125 3-35 (363)
358 2ewd_A Lactate dehydrogenase,; 89.1 0.29 9.9E-06 43.4 3.9 33 91-124 5-38 (317)
359 1t2d_A LDH-P, L-lactate dehydr 89.0 0.38 1.3E-05 42.9 4.6 33 91-124 5-38 (322)
360 2vhw_A Alanine dehydrogenase; 88.9 0.38 1.3E-05 43.9 4.6 34 90-124 168-201 (377)
361 1bg6_A N-(1-D-carboxylethyl)-L 88.7 0.4 1.4E-05 42.9 4.6 32 91-123 5-36 (359)
362 2egg_A AROE, shikimate 5-dehyd 88.6 0.44 1.5E-05 42.0 4.7 33 90-123 141-174 (297)
363 3d0o_A L-LDH 1, L-lactate dehy 88.5 0.37 1.3E-05 42.9 4.2 32 91-123 7-40 (317)
364 3tl2_A Malate dehydrogenase; c 88.4 0.51 1.7E-05 41.9 5.0 32 91-123 9-41 (315)
365 2aef_A Calcium-gated potassium 88.4 0.3 1E-05 41.1 3.4 32 91-124 10-41 (234)
366 3hwr_A 2-dehydropantoate 2-red 88.3 0.41 1.4E-05 42.4 4.4 31 91-123 20-50 (318)
367 3k96_A Glycerol-3-phosphate de 88.3 0.44 1.5E-05 43.1 4.6 33 91-124 30-62 (356)
368 3ond_A Adenosylhomocysteinase; 88.1 0.43 1.5E-05 45.0 4.5 34 90-124 265-298 (488)
369 1z82_A Glycerol-3-phosphate de 88.1 0.46 1.6E-05 42.4 4.6 33 90-123 14-46 (335)
370 1nvt_A Shikimate 5'-dehydrogen 88.1 0.46 1.6E-05 41.4 4.5 31 91-123 129-159 (287)
371 1zud_1 Adenylyltransferase THI 88.0 0.43 1.5E-05 40.9 4.1 34 90-124 28-62 (251)
372 3c24_A Putative oxidoreductase 88.0 0.4 1.4E-05 41.7 4.0 32 92-124 13-45 (286)
373 1p77_A Shikimate 5-dehydrogena 87.9 0.35 1.2E-05 41.9 3.6 32 91-123 120-151 (272)
374 1zej_A HBD-9, 3-hydroxyacyl-CO 87.9 0.51 1.8E-05 41.5 4.6 33 90-124 12-44 (293)
375 1pjq_A CYSG, siroheme synthase 87.8 0.46 1.6E-05 44.5 4.5 32 91-123 13-44 (457)
376 3tnl_A Shikimate dehydrogenase 87.8 0.51 1.8E-05 41.9 4.6 33 90-123 154-187 (315)
377 3gvi_A Malate dehydrogenase; N 87.7 0.57 1.9E-05 41.8 4.9 33 91-124 8-41 (324)
378 3rui_A Ubiquitin-like modifier 87.7 0.52 1.8E-05 42.3 4.6 34 90-124 34-68 (340)
379 1vg0_A RAB proteins geranylger 87.7 1.1 3.8E-05 43.8 7.3 56 169-239 377-434 (650)
380 1guz_A Malate dehydrogenase; o 87.6 0.54 1.8E-05 41.6 4.7 33 92-124 2-35 (310)
381 1mv8_A GMD, GDP-mannose 6-dehy 87.5 0.41 1.4E-05 44.5 4.0 32 92-124 2-33 (436)
382 1ldn_A L-lactate dehydrogenase 87.5 0.5 1.7E-05 42.0 4.4 33 91-124 7-41 (316)
383 1ur5_A Malate dehydrogenase; o 87.5 0.54 1.9E-05 41.6 4.6 32 92-124 4-36 (309)
384 1jay_A Coenzyme F420H2:NADP+ o 87.5 0.62 2.1E-05 38.3 4.7 32 92-124 2-34 (212)
385 3jyo_A Quinate/shikimate dehyd 87.4 0.54 1.8E-05 41.1 4.5 33 90-123 127-160 (283)
386 3eag_A UDP-N-acetylmuramate:L- 87.4 0.51 1.7E-05 42.0 4.4 33 92-125 6-39 (326)
387 3h8v_A Ubiquitin-like modifier 87.3 0.43 1.5E-05 41.9 3.8 34 90-124 36-70 (292)
388 3pef_A 6-phosphogluconate dehy 87.1 0.56 1.9E-05 40.8 4.4 32 92-124 3-34 (287)
389 3dtt_A NADP oxidoreductase; st 87.1 0.61 2.1E-05 39.6 4.6 34 90-124 19-52 (245)
390 3doj_A AT3G25530, dehydrogenas 87.1 0.56 1.9E-05 41.4 4.4 33 91-124 22-54 (310)
391 3qha_A Putative oxidoreductase 87.1 0.54 1.8E-05 41.2 4.3 34 91-125 16-49 (296)
392 4dll_A 2-hydroxy-3-oxopropiona 87.0 0.55 1.9E-05 41.7 4.4 33 91-124 32-64 (320)
393 3k30_A Histamine dehydrogenase 87.0 0.77 2.6E-05 45.3 5.9 99 91-242 524-624 (690)
394 2vns_A Metalloreductase steap3 87.0 0.63 2.2E-05 38.7 4.5 33 91-124 29-61 (215)
395 3g79_A NDP-N-acetyl-D-galactos 87.0 0.51 1.7E-05 44.5 4.3 35 91-125 19-54 (478)
396 3don_A Shikimate dehydrogenase 87.0 0.51 1.7E-05 41.1 4.0 34 90-124 117-151 (277)
397 1y6j_A L-lactate dehydrogenase 86.8 0.65 2.2E-05 41.3 4.7 33 91-124 8-42 (318)
398 1b37_A Protein (polyamine oxid 86.7 0.69 2.4E-05 43.2 5.1 55 170-239 206-267 (472)
399 1a5z_A L-lactate dehydrogenase 86.7 0.48 1.6E-05 42.1 3.8 32 92-124 2-35 (319)
400 3g0o_A 3-hydroxyisobutyrate de 86.6 0.62 2.1E-05 40.9 4.5 33 91-124 8-40 (303)
401 3p7m_A Malate dehydrogenase; p 86.6 0.75 2.6E-05 41.0 5.0 33 91-124 6-39 (321)
402 3l6d_A Putative oxidoreductase 86.6 0.72 2.5E-05 40.6 4.9 33 91-124 10-42 (306)
403 3vtf_A UDP-glucose 6-dehydroge 86.6 0.52 1.8E-05 43.9 4.0 33 91-124 22-54 (444)
404 3mog_A Probable 3-hydroxybutyr 86.5 0.55 1.9E-05 44.3 4.3 32 92-124 7-38 (483)
405 1evy_A Glycerol-3-phosphate de 86.5 0.48 1.7E-05 42.7 3.8 32 92-124 17-48 (366)
406 3u62_A Shikimate dehydrogenase 86.5 0.67 2.3E-05 39.8 4.5 31 92-123 110-141 (253)
407 1txg_A Glycerol-3-phosphate de 86.4 0.49 1.7E-05 41.9 3.7 30 92-122 2-31 (335)
408 3o8q_A Shikimate 5-dehydrogena 86.3 0.78 2.7E-05 40.0 4.8 33 90-123 126-159 (281)
409 3t4e_A Quinate/shikimate dehyd 86.1 0.72 2.5E-05 40.9 4.6 33 90-123 148-181 (312)
410 3ggo_A Prephenate dehydrogenas 86.1 0.83 2.8E-05 40.5 5.0 33 91-124 34-68 (314)
411 3vku_A L-LDH, L-lactate dehydr 86.0 0.62 2.1E-05 41.6 4.1 32 91-123 10-43 (326)
412 3pwz_A Shikimate dehydrogenase 86.0 0.74 2.5E-05 40.0 4.5 33 90-123 120-153 (272)
413 3fbt_A Chorismate mutase and s 85.9 0.64 2.2E-05 40.6 4.1 33 90-123 122-155 (282)
414 4huj_A Uncharacterized protein 85.9 0.41 1.4E-05 39.9 2.8 33 91-124 24-57 (220)
415 3orq_A N5-carboxyaminoimidazol 85.9 1.5 5.2E-05 39.7 6.8 34 91-125 13-46 (377)
416 3c7a_A Octopine dehydrogenase; 85.8 0.62 2.1E-05 42.6 4.2 29 92-121 4-33 (404)
417 3d4o_A Dipicolinate synthase s 85.7 0.78 2.7E-05 40.1 4.6 33 90-123 155-187 (293)
418 2rir_A Dipicolinate synthase, 85.7 0.78 2.7E-05 40.2 4.6 33 90-123 157-189 (300)
419 1oju_A MDH, malate dehydrogena 85.5 0.6 2.1E-05 41.0 3.7 32 92-124 2-35 (294)
420 1hyh_A L-hicdh, L-2-hydroxyiso 85.5 0.6 2.1E-05 41.2 3.8 32 92-124 3-36 (309)
421 2i6t_A Ubiquitin-conjugating e 85.5 0.61 2.1E-05 41.2 3.8 33 91-124 15-49 (303)
422 1lu9_A Methylene tetrahydromet 85.4 0.81 2.8E-05 39.8 4.5 32 91-123 120-152 (287)
423 2o3j_A UDP-glucose 6-dehydroge 85.3 0.63 2.1E-05 43.9 4.0 33 92-124 11-44 (481)
424 2we8_A Xanthine dehydrogenase; 85.3 2.5 8.6E-05 38.6 7.9 35 90-125 204-238 (386)
425 2f1k_A Prephenate dehydrogenas 85.2 0.83 2.8E-05 39.3 4.5 32 92-124 2-33 (279)
426 2pv7_A T-protein [includes: ch 85.1 0.87 3E-05 39.9 4.6 32 92-124 23-55 (298)
427 3qsg_A NAD-binding phosphogluc 84.9 0.64 2.2E-05 41.1 3.7 32 91-123 25-57 (312)
428 4gx0_A TRKA domain protein; me 84.9 0.83 2.8E-05 43.9 4.8 34 91-125 349-382 (565)
429 2hk9_A Shikimate dehydrogenase 84.9 0.68 2.3E-05 40.1 3.8 32 91-123 130-161 (275)
430 2uyy_A N-PAC protein; long-cha 84.8 0.82 2.8E-05 40.2 4.4 33 91-124 31-63 (316)
431 2h78_A Hibadh, 3-hydroxyisobut 84.7 0.73 2.5E-05 40.3 4.0 32 92-124 5-36 (302)
432 3pqe_A L-LDH, L-lactate dehydr 84.7 0.69 2.3E-05 41.3 3.8 32 91-123 6-39 (326)
433 3pdu_A 3-hydroxyisobutyrate de 84.7 0.57 1.9E-05 40.7 3.2 32 92-124 3-34 (287)
434 2zqz_A L-LDH, L-lactate dehydr 84.6 0.82 2.8E-05 40.8 4.2 33 90-123 9-43 (326)
435 3vh1_A Ubiquitin-like modifier 84.4 0.95 3.2E-05 43.7 4.8 34 90-124 327-361 (598)
436 2zyd_A 6-phosphogluconate dehy 84.4 0.95 3.3E-05 42.7 4.8 34 90-124 15-48 (480)
437 2yg5_A Putrescine oxidase; oxi 84.3 0.86 2.9E-05 42.1 4.5 51 170-240 215-266 (453)
438 2wtb_A MFP2, fatty acid multif 84.3 0.82 2.8E-05 45.5 4.5 32 92-124 314-345 (725)
439 3gvp_A Adenosylhomocysteinase 84.3 0.81 2.8E-05 42.4 4.1 34 90-124 220-253 (435)
440 2dvm_A Malic enzyme, 439AA lon 84.3 0.9 3.1E-05 42.2 4.5 31 90-121 186-219 (439)
441 3ew7_A LMO0794 protein; Q8Y8U8 84.3 1.1 3.8E-05 36.6 4.7 32 92-124 2-34 (221)
442 2p4q_A 6-phosphogluconate dehy 84.3 0.97 3.3E-05 42.8 4.8 34 90-124 10-43 (497)
443 2g5c_A Prephenate dehydrogenas 84.2 0.95 3.2E-05 39.0 4.4 32 92-124 3-36 (281)
444 3h5n_A MCCB protein; ubiquitin 84.1 0.81 2.8E-05 41.3 4.0 34 90-124 118-152 (353)
445 3ce6_A Adenosylhomocysteinase; 84.0 0.91 3.1E-05 42.9 4.5 34 90-124 274-307 (494)
446 4aj2_A L-lactate dehydrogenase 84.0 0.98 3.3E-05 40.4 4.5 32 91-123 20-53 (331)
447 4gsl_A Ubiquitin-like modifier 84.0 0.95 3.2E-05 43.8 4.6 34 90-124 326-360 (615)
448 3ldh_A Lactate dehydrogenase; 84.0 0.77 2.6E-05 41.0 3.7 32 91-123 22-55 (330)
449 3q2o_A Phosphoribosylaminoimid 83.9 1.7 5.7E-05 39.5 6.1 33 91-124 15-47 (389)
450 1y8q_A Ubiquitin-like 1 activa 83.7 0.82 2.8E-05 41.1 3.9 34 90-124 36-70 (346)
451 3h2s_A Putative NADH-flavin re 83.6 1.2 3.9E-05 36.7 4.6 32 92-124 2-34 (224)
452 3e8x_A Putative NAD-dependent 83.6 1.2 4.1E-05 37.1 4.7 33 91-124 22-55 (236)
453 2b9w_A Putative aminooxidase; 83.6 1 3.5E-05 41.2 4.6 41 184-240 216-256 (424)
454 2d5c_A AROE, shikimate 5-dehyd 83.6 1 3.6E-05 38.5 4.4 31 92-123 118-148 (263)
455 3nep_X Malate dehydrogenase; h 83.6 0.85 2.9E-05 40.5 3.9 32 92-124 2-35 (314)
456 3ojo_A CAP5O; rossmann fold, c 83.6 0.84 2.9E-05 42.4 4.0 33 91-124 12-44 (431)
457 1hdo_A Biliverdin IX beta redu 83.6 1.2 4E-05 35.9 4.5 32 92-124 5-37 (206)
458 4eez_A Alcohol dehydrogenase 1 83.6 1.1 3.8E-05 39.9 4.7 33 91-123 165-197 (348)
459 1vpd_A Tartronate semialdehyde 83.5 0.89 3E-05 39.6 4.0 32 92-124 7-38 (299)
460 1yqg_A Pyrroline-5-carboxylate 83.5 0.86 2.9E-05 38.8 3.8 32 92-124 2-34 (263)
461 3o38_A Short chain dehydrogena 83.4 0.82 2.8E-05 39.0 3.6 33 91-124 23-57 (266)
462 1edz_A 5,10-methylenetetrahydr 83.4 1 3.4E-05 40.1 4.2 33 90-123 177-210 (320)
463 1npy_A Hypothetical shikimate 83.3 0.9 3.1E-05 39.4 3.8 33 90-123 119-152 (271)
464 4e21_A 6-phosphogluconate dehy 83.3 1.1 3.8E-05 40.4 4.6 33 91-124 23-55 (358)
465 3ius_A Uncharacterized conserv 83.2 1.2 4.1E-05 38.2 4.7 32 92-124 7-38 (286)
466 3zwc_A Peroxisomal bifunctiona 83.1 1 3.6E-05 44.8 4.7 33 91-124 317-349 (742)
467 2gf2_A Hibadh, 3-hydroxyisobut 83.1 0.95 3.3E-05 39.3 4.0 32 92-124 2-33 (296)
468 1yj8_A Glycerol-3-phosphate de 82.7 0.75 2.6E-05 41.7 3.3 33 92-125 23-62 (375)
469 1leh_A Leucine dehydrogenase; 82.7 1.2 4E-05 40.4 4.5 33 90-123 173-205 (364)
470 1x0v_A GPD-C, GPDH-C, glycerol 82.6 0.66 2.3E-05 41.5 2.8 33 92-125 10-49 (354)
471 1gpj_A Glutamyl-tRNA reductase 82.2 0.95 3.3E-05 41.6 3.8 33 90-123 167-200 (404)
472 2pgd_A 6-phosphogluconate dehy 82.2 1.2 4E-05 42.0 4.5 32 92-124 4-35 (482)
473 3gpi_A NAD-dependent epimerase 82.1 1.5 5.2E-05 37.6 4.9 32 92-124 5-36 (286)
474 2rcy_A Pyrroline carboxylate r 82.0 1.2 4E-05 37.9 4.1 33 92-125 6-42 (262)
475 3fi9_A Malate dehydrogenase; s 81.9 1.4 4.8E-05 39.5 4.7 32 91-123 9-43 (343)
476 3ktd_A Prephenate dehydrogenas 81.8 1.3 4.4E-05 39.8 4.4 33 91-124 9-41 (341)
477 1pgj_A 6PGDH, 6-PGDH, 6-phosph 81.7 1.2 4.2E-05 41.9 4.4 32 92-124 3-34 (478)
478 3two_A Mannitol dehydrogenase; 81.5 1.5 5E-05 39.2 4.7 34 90-124 177-210 (348)
479 2dkn_A 3-alpha-hydroxysteroid 81.4 1.6 5.5E-05 36.5 4.7 32 92-124 3-35 (255)
480 3cky_A 2-hydroxymethyl glutara 81.3 1.2 4.2E-05 38.7 4.0 33 91-124 5-37 (301)
481 2o7s_A DHQ-SDH PR, bifunctiona 81.2 0.87 3E-05 43.4 3.2 32 91-123 365-396 (523)
482 1tt5_B Ubiquitin-activating en 81.1 1.4 4.8E-05 40.9 4.5 34 90-124 40-74 (434)
483 3pid_A UDP-glucose 6-dehydroge 81.0 1.5 5E-05 40.8 4.5 32 91-124 37-68 (432)
484 2qrj_A Saccharopine dehydrogen 81.0 1.1 3.8E-05 40.9 3.7 34 90-124 214-251 (394)
485 3k31_A Enoyl-(acyl-carrier-pro 81.0 1.5 5.3E-05 38.1 4.6 33 91-124 31-66 (296)
486 3tri_A Pyrroline-5-carboxylate 80.9 1.6 5.6E-05 37.8 4.7 33 91-124 4-39 (280)
487 3r6d_A NAD-dependent epimerase 80.9 1.7 5.8E-05 35.7 4.6 32 92-124 7-40 (221)
488 2d4a_B Malate dehydrogenase; a 80.9 1.2 4E-05 39.4 3.7 31 93-124 2-33 (308)
489 1np3_A Ketol-acid reductoisome 80.8 1.5 5E-05 39.3 4.4 32 92-124 18-49 (338)
490 4gwg_A 6-phosphogluconate dehy 80.7 1.6 5.5E-05 41.1 4.8 33 91-124 5-37 (484)
491 1wdk_A Fatty oxidation complex 80.7 1 3.5E-05 44.7 3.6 33 91-124 315-347 (715)
492 2pd4_A Enoyl-[acyl-carrier-pro 80.6 2 7E-05 36.8 5.1 32 92-124 8-42 (275)
493 1mld_A Malate dehydrogenase; o 80.6 1.6 5.3E-05 38.7 4.5 32 92-124 2-36 (314)
494 1dlj_A UDP-glucose dehydrogena 80.5 1.5 5.3E-05 40.1 4.6 31 92-124 2-32 (402)
495 4e4t_A Phosphoribosylaminoimid 80.4 1.9 6.5E-05 39.8 5.1 33 91-124 36-68 (419)
496 3nv9_A Malic enzyme; rossmann 80.3 1.6 5.5E-05 40.6 4.4 36 89-125 218-256 (487)
497 1yqd_A Sinapyl alcohol dehydro 80.1 1.7 5.7E-05 39.2 4.6 33 90-123 188-220 (366)
498 3n58_A Adenosylhomocysteinase; 80.0 1.5 5E-05 40.9 4.1 34 90-124 247-280 (464)
499 3gt0_A Pyrroline-5-carboxylate 80.0 1.9 6.3E-05 36.5 4.6 32 92-124 4-39 (247)
500 3h9u_A Adenosylhomocysteinase; 79.9 1.5 5.1E-05 40.7 4.1 34 90-124 211-244 (436)
No 1
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=100.00 E-value=6.9e-44 Score=324.96 Aligned_cols=260 Identities=65% Similarity=1.065 Sum_probs=230.3
Q ss_pred CCCccCCCchhhhhHHHHHhHhhhcccCCcccEEEECCChHHHHHHHHhhcC-CCCeEEEEeccCCCCCccccCcccchh
Q 020815 61 NTFKFDPIKESIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSA 139 (321)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DVvIIGgG~aGl~aA~~La~~-~G~~V~liEk~~~~gg~~~~~g~~~~~ 139 (321)
+.|.|.++.+..+++.+.++++..+....+|||+|||||++|+++|++|++. +|++|+|||+...+||++|.++..+..
T Consensus 50 ~~~~f~~i~~~~isra~~~~~~~~~~~~~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~ 129 (344)
T 3jsk_A 50 DAFTFSPIRESTVSRAMTRRYFADLDAHAETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSA 129 (344)
T ss_dssp TTCCCCCCCHHHHHHHHHHHHHHHHHHHHBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCC
T ss_pred CCcCcccccHHHHHHHHHHhhhhhhcccCcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchh
Confidence 7889999999999999999998776655679999999999999999999984 489999999999999999988888777
Q ss_pred hhccchHHHHHHHcCCCcccCCCeEEEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEEC-----------------C
Q 020815 140 MVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-----------------G 202 (321)
Q Consensus 140 ~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~-----------------~ 202 (321)
........++++++|++|+..+.+....+..++.+.|++++.+..|+++++++.+++++.++ +
T Consensus 130 ~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g 209 (344)
T 3jsk_A 130 MVMRKPADVFLDEVGVPYEDEGDYVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEA 209 (344)
T ss_dssp EEEETTTHHHHHHHTCCCEECSSEEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------C
T ss_pred hhcchHHHHHHHHcCCcccccCCeEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCC
Confidence 77667778999999999987767777777888999999999865799999999999999876 3
Q ss_pred --EEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCCCcchhhhhhhhcCCcccccCCceeecccccchhhccc
Q 020815 203 --RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLT 280 (321)
Q Consensus 203 --~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 280 (321)
+|.||.+.|..+..+...+.+.+..+|+|++||+|||+.+++.....+++.+++..+.+++++++|++..|+.++.++
T Consensus 210 ~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~~t 289 (344)
T 3jsk_A 210 KVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVNNT 289 (344)
T ss_dssp CEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHTC
T ss_pred CceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCchhhHHHHHHHhhcCcccccCCCcccccccchhhhcccC
Confidence 899999987544444433233456799999999999999999999999999999988899999999999999999999
Q ss_pred ccccccccccccchhhcCCCCCCCcceeeeeeecchhccc
Q 020815 281 REVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAARM 320 (321)
Q Consensus 281 ~~~~pg~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 320 (321)
++++||+|++||++.+++|.|||||+||+|++||+|||++
T Consensus 290 ~~v~~gl~~~gm~~~~~~g~~rmgp~fg~m~~sg~~~a~~ 329 (344)
T 3jsk_A 290 REIVPGLIVGGMELSEIDGANRMGPTFGAMALSGVKAAHE 329 (344)
T ss_dssp EEEETTEEECGGGHHHHHTCEECCSCCHHHHHHHHHHHHH
T ss_pred ceEcCCEEEechhhHhhcCCCCCCcccceeeecCHHHHHH
Confidence 9999999999999999999999999999999999999985
No 2
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=100.00 E-value=2.8e-38 Score=286.57 Aligned_cols=261 Identities=59% Similarity=0.971 Sum_probs=219.0
Q ss_pred CCCCccCCCchhhhhHHHHHhHhhhcccCCcccEEEECCChHHHHHHHHhhcC-CCCeEEEEeccCCCCCccccCcccch
Q 020815 60 LNTFKFDPIKESIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFS 138 (321)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DVvIIGgG~aGl~aA~~La~~-~G~~V~liEk~~~~gg~~~~~g~~~~ 138 (321)
+..+.+.++.+....+.+..+++..+....++||+|||||++|+++|+.|++. +|.+|+|+|+...+||+.|.++..+.
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~ 114 (326)
T 2gjc_A 35 WSDFKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFS 114 (326)
T ss_dssp CTTCCCCCCCHHHHHHHHHHHHHHHHHHTTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCC
T ss_pred CCccccccccccccchhhhhhhhhhhcccCcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccc
Confidence 33344555566677777888888877777789999999999999999999984 37999999999999998888877776
Q ss_pred hhhccchHHHHHHHcCCCcccCCCeEEEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEEC----C--EEEEEEEeec
Q 020815 139 AMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG----G--RVGGVVTNWA 212 (321)
Q Consensus 139 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~----~--~v~gv~~~~~ 212 (321)
.........++++++|+++.....+....+...+...|++++.+..|++++++++|++++.++ + +|.||.+.|.
T Consensus 115 ~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~ 194 (326)
T 2gjc_A 115 AMVMRKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWT 194 (326)
T ss_dssp CEEEETTTHHHHHHTTCCCEECSSEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEH
T ss_pred hhhhhhHHHHHHHhhCcccccCCCeEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecce
Confidence 666666678899999999987777777778888899999999866799999999999999873 5 8999999875
Q ss_pred ceecccCCCCCCCceEEEc---------------CeEEEcCCCCCCCcchhhhhhhhcCCcccccCCceeecccccchhh
Q 020815 213 LVSMNHDTQSCMDPNVMEA---------------KVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIV 277 (321)
Q Consensus 213 ~~~~~~~~~~~g~~~~i~a---------------~~VI~AtG~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 277 (321)
.+..+..++.+.+..+|.| ++||+|||+.+++.....+++..++....+.+++++|.+..|+.++
T Consensus 195 ~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~e~~~~ 274 (326)
T 2gjc_A 195 LVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHDVV 274 (326)
T ss_dssp HHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHHHHHHHHHHSSCCCCCCCCBCHHHHHHHHH
T ss_pred eecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCchHHHHHHhhccccccccccCceeccccccchhhee
Confidence 4444332223345678999 9999999999999988888888888877899999999999999999
Q ss_pred ccccc--ccccccccccchhhcCCCCCCCcceeeeeeecchhccc
Q 020815 278 RLTRE--VVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAARM 320 (321)
Q Consensus 278 ~~~~~--~~pg~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 320 (321)
+++++ ++||+|++||++.+++|.|||||+||+|++||+|||++
T Consensus 275 ~~~~~~~~~~~~~~~g~~~~~~~~~~r~g~~fg~m~~sg~~~a~~ 319 (326)
T 2gjc_A 275 IHSGAYAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQ 319 (326)
T ss_dssp HHCEECTTSTTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHH
T ss_pred ecCCCccccCCEEECChHHHHhcCCCCCChhhhhhhhhhHHHHHH
Confidence 99999 99999999999999999999999999999999999985
No 3
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=100.00 E-value=3e-33 Score=251.16 Aligned_cols=265 Identities=90% Similarity=1.358 Sum_probs=212.6
Q ss_pred CCCCCCCCCccCCCchhhhhHHHHHhHhhhcccCCcccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCc
Q 020815 55 SPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGG 134 (321)
Q Consensus 55 ~a~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g 134 (321)
.++.+++.|.|.++++..+++.|.++|+.+|....++||+|||||++|+++|+.|++.+|++|+|||+...+++++|.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~ 83 (284)
T 1rp0_A 4 SAGYDLNAFTFDPIKESIVSREMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGG 83 (284)
T ss_dssp ---CCTTSCCCCCCCHHHHHHHHHHHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCS
T ss_pred ccCCCCcceeeeccchhhhHHHHHHHHHHhhhhccccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCC
Confidence 45678899999999999999999999988776556899999999999999999999943899999999998998888877
Q ss_pred ccchhhhccchHHHHHHHcCCCcccCCCeEEEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecce
Q 020815 135 QLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALV 214 (321)
Q Consensus 135 ~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~ 214 (321)
..+..........++++++|++|.....+....+...+...|++++.++.|++++++++|+++..+++++.+|.+.+..+
T Consensus 84 ~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~ 163 (284)
T 1rp0_A 84 QLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALV 163 (284)
T ss_dssp TTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHH
T ss_pred cchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEecccc
Confidence 77666666666678999999999877666666677888888888887668999999999999999999998888754211
Q ss_pred ecccCCCCCCCceEEEcCeEEEcCCCCCCCcchhhhhhhhcCCcccccCCceeecccccchhhcccccccccccccccch
Q 020815 215 SMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEV 294 (321)
Q Consensus 215 ~~~~~~~~~g~~~~i~a~~VI~AtG~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~g~~~ 294 (321)
.++..++.+++..+++||.||+|+|+.+.......+.+...+....+...++++.+..+..++...++..|++|++|+.+
T Consensus 164 ~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~~~~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~~~p~i~a~G~~~ 243 (284)
T 1rp0_A 164 AQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEV 243 (284)
T ss_dssp HTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHHCEEEETTEEECTHHH
T ss_pred ccccCccccCceEEEECCEEEECCCCchHHHHHHHHHhhhccCCCCcCCcCCchhhhhhHHHhhccccccCCEEEEeeeh
Confidence 11211111124478999999999999988766555555555554455566778777666566667778889999999999
Q ss_pred hhcCCCCCCCcceeeeeeecchhcc
Q 020815 295 AEIDGAPRMGPTFGAMMISGQKAAR 319 (321)
Q Consensus 295 ~~~~g~~~~~~~~~~~~~~~~~~~~ 319 (321)
..+.|.|++||+|++|+.||.+||.
T Consensus 244 ~~~~g~~~~gp~~~~~~~sG~~~a~ 268 (284)
T 1rp0_A 244 AEIDGAPRMGPTFGAMMISGQKAGQ 268 (284)
T ss_dssp HHHHTCEECCSCCHHHHHHHHHHHH
T ss_pred hhhcCCCCcChHHHHHHHhHHHHHH
Confidence 9999999999999999999999985
No 4
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.96 E-value=8.4e-28 Score=219.67 Aligned_cols=262 Identities=57% Similarity=0.920 Sum_probs=202.5
Q ss_pred CCCCCCCccCCCchhhhhHHHHHhHhhhcccCCcccEEEECCChHHHHHHHHhhc--CCCCeEEEEeccCCCCCccccCc
Q 020815 57 PYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSK--NPNIQIAIIEQSVSPGGGAWLGG 134 (321)
Q Consensus 57 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DVvIIGgG~aGl~aA~~La~--~~G~~V~liEk~~~~gg~~~~~g 134 (321)
..|++++.+.|+++..+++.+.++|+.+|....++||+||||||+|++||++|++ . |++|+|||+++.+||.++.++
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DV~IIGaGPAGlsAA~~la~~r~-G~~V~viEk~~~~GG~~~~~~ 110 (326)
T 3fpz_A 32 KEDWSDFKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRP-DLKVCIIESSVAPGGGSWLGG 110 (326)
T ss_dssp STTCTTCCCCCCCHHHHHHHHHHHHHHHHHHTTEESEEEECCSHHHHHHHHHHHHHCT-TSCEEEECSSSSCCTTTTCCS
T ss_pred cccccccccCCccHHHHHHHHHHHHHhhhhhccCCCEEEECCCHHHHHHHHHHHHhCC-CCeEEEEECCCCCCceEEeCC
Confidence 3466788999999999999999999999988889999999999999999999974 5 999999999999999999888
Q ss_pred ccchhhhccchHHHHHHHcCCCcccCCCeEEEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEEC------CEEEEEE
Q 020815 135 QLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG------GRVGGVV 208 (321)
Q Consensus 135 ~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~------~~v~gv~ 208 (321)
+.+..........+.++++|+++..........+...+......+.....|.+++....+.++...+ .++..+-
T Consensus 111 ~~~~~~~l~~~~~~~~~e~Gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~vig 190 (326)
T 3fpz_A 111 QLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVV 190 (326)
T ss_dssp TTCCCEEEETTTHHHHHHTTCCCEECSSEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEEESSCSSSSCEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHHcCCEEEECCcceecceeEEEEcchhhhccccccceeecccccceeeccCCcccCCCEEEEEc
Confidence 8887777777777788999999887766666666666666666666668899999998888887654 2444433
Q ss_pred EeecceecccCCCCCCCceE---------------EEcCeEEEcCCCCCCCcchhhhhhhhcCCcccccCCceeeccccc
Q 020815 209 TNWALVSMNHDTQSCMDPNV---------------MEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAE 273 (321)
Q Consensus 209 ~~~~~~~~~~~~~~~g~~~~---------------i~a~~VI~AtG~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 273 (321)
..+..+.........+...+ ...+.++.++|..+.......+.....+......+..+.+.+..+
T Consensus 191 gg~~av~~a~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~e 270 (326)
T 3fpz_A 191 TNWTLVTQAHGTQCAMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLDMNHAE 270 (326)
T ss_dssp EEEHHHHTCTTSSSCCCCEEEEESCBCTTSSBCTTSCCCEEEECCCSCSSSCSHHHHHHHHHCTTCCCCCCCCBCHHHHH
T ss_pred cCceeeehhhhhhhccCcEEEEeecccccccccceeecceEEEEecceeeEeecceeEEEecCceeeecceecccccccC
Confidence 33211111110001111122 234678899998887776677777767776677788888777777
Q ss_pred chhhccc--ccccccccccccchhhcCCCCCCCcceeeeeeecchhcc
Q 020815 274 DAIVRLT--REVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAR 319 (321)
Q Consensus 274 ~~~~~~~--~~~~pg~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 319 (321)
+.++.+. +..+||+|++||++..++|.+||||+||+|+.||++||+
T Consensus 271 ~~iv~~~~~~t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe 318 (326)
T 3fpz_A 271 HDVVIHSGAYAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAE 318 (326)
T ss_dssp HHHHHHCEECTTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHH
T ss_pred CeEEECCCeEECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHH
Confidence 6666543 446899999999999999999999999999999999997
No 5
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.73 E-value=3.4e-17 Score=142.15 Aligned_cols=190 Identities=22% Similarity=0.269 Sum_probs=120.0
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecH
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 169 (321)
+|||+|||||++|+.+|+.|++. |.+|+|||+.....| .+..... .. ..... .+.++. +.. .. +.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~-g~~v~lie~~~~~~G-~~~~~~~-~~-~~~~~---~~~~~~---d~~-g~----~~ 67 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQK-GVRVGLLTQSLDAVM-MPFLPPK-PP-FPPGS---LLERAY---DPK-DE----RV 67 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCGGGTT-CCSSCCC-SC-CCTTC---HHHHHC---CTT-CC----CH
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCCEEEEecCCCcCC-cccCccc-cc-cchhh---HHhhhc---cCC-CC----CH
Confidence 58999999999999999999999 999999999743223 2211100 00 00011 112221 010 10 44
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCCCc----
Q 020815 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFG---- 245 (321)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~~~---- 245 (321)
..+...|.+.+.+..|++++. ++|+++..+++++.+|.+.+ +.+++||.||+|+|.++...
T Consensus 68 ~~~~~~l~~~~~~~~gv~i~~-~~v~~i~~~~~~v~~v~~~~--------------g~~i~a~~VV~A~G~~s~~~~~~G 132 (232)
T 2cul_A 68 WAFHARAKYLLEGLRPLHLFQ-ATATGLLLEGNRVVGVRTWE--------------GPPARGEKVVLAVGSFLGARLFLG 132 (232)
T ss_dssp HHHHHHHHHHHHTCTTEEEEE-CCEEEEEEETTEEEEEEETT--------------SCCEECSEEEECCTTCSSCEEEET
T ss_pred HHHHHHHHHHHHcCCCcEEEE-eEEEEEEEeCCEEEEEEECC--------------CCEEECCEEEECCCCChhhceecC
Confidence 567777777776435999995 69999998888887777642 24799999999999865421
Q ss_pred --------------chhhhhhhhcCCcc--------cccCC-------ceeecccccchhhcccccccccccccccchhh
Q 020815 246 --------------ATGVKRLKSIGMIE--------EVPGM-------KALDMNSAEDAIVRLTREVVPGMIVTGMEVAE 296 (321)
Q Consensus 246 --------------~~~~~~~~~~g~~~--------~~~~~-------~~~~~~~~~~~~~~~~~~~~pg~~~~g~~~~~ 296 (321)
....+.+.+.++.. .+.+. ..++....+..++..+ .+|++|++|+++
T Consensus 133 ~~~~~~g~~g~~~~~~l~~~l~~~g~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t--~~p~iya~G~~a-- 208 (232)
T 2cul_A 133 GVVEEAGRLSEASYPDLLEDLSRLGFRFVEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLK--RLEGLYAVGLCV-- 208 (232)
T ss_dssp TEEESEEETTEECCSHHHHHHHHTTCCEEEEEEEEC-----CCEEEEEEEECGGGEETTTTEET--TSBSEEECGGGT--
T ss_pred CccCCCCCCcccchhhhCHHHHhCCCeEEccccccCcCCCCCCccCchhhcccCCCCCcccccc--ccccceeeeecc--
Confidence 01123333444310 00111 2334444444444434 789999999999
Q ss_pred cCCCCCCCcceeeeeeecchhcc
Q 020815 297 IDGAPRMGPTFGAMMISGQKAAR 319 (321)
Q Consensus 297 ~~g~~~~~~~~~~~~~~~~~~~~ 319 (321)
..| +|+.|+.+|+++|.
T Consensus 209 ~~g------~~~~~~~~g~~~a~ 225 (232)
T 2cul_A 209 REG------DYARMSEEGKRLAE 225 (232)
T ss_dssp SCC------CHHHHHHHHHHHHH
T ss_pred cCc------cHHHHHHHHHHHHH
Confidence 433 89999999999885
No 6
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.66 E-value=1.2e-15 Score=141.26 Aligned_cols=132 Identities=21% Similarity=0.281 Sum_probs=95.4
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCccc----------
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDE---------- 159 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~---------- 159 (321)
+|||+||||||+|+++|+.|++. |++|+||||.+.++.....++.+.. +.++++++....
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~-G~~V~v~Er~~~~~~~~~~g~~l~~---------~~l~~l~~~~~~~~~~~~~~~~ 73 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKY-GLKTLMIEKRPEIGSPVRCGEGLSK---------GILNEADIKADRSFIANEVKGA 73 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSTTCSCCSCCEEET---------HHHHHTTCCCCTTTEEEEESEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCcEEEEeCCCCCCCCCceecccCH---------HHHHHcCCCchhhhhhcccceE
Confidence 59999999999999999999999 9999999998776643322332221 123333332110
Q ss_pred ------------------CCCeEEEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCC
Q 020815 160 ------------------QDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQ 221 (321)
Q Consensus 160 ------------------~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~ 221 (321)
.....+..+...+...|.+.+. +.|++++.+++++++..+++++.++....
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~-~~G~~~~~~~~v~~~~~~~~~~~~v~~~~---------- 142 (397)
T 3oz2_A 74 RIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAA-KAGADVWVKSPALGVIKENGKVAGAKIRH---------- 142 (397)
T ss_dssp EEECTTCSSCEEEECSSSSCCCEEEECHHHHHHHHHHHHH-HHTCEEESSCCEEEEEEETTEEEEEEEEE----------
T ss_pred EEEeCCCceEeeccccccCCceeEEEEHHHHHHHHHHHHH-hcCcEEeeeeeeeeeeeccceeeeeeecc----------
Confidence 0112234466778888888886 57999999999999999999988877642
Q ss_pred CCCCceEEEcCeEEEcCCCCCC
Q 020815 222 SCMDPNVMEAKVVVSSCGHDGP 243 (321)
Q Consensus 222 ~~g~~~~i~a~~VI~AtG~~~~ 243 (321)
+++..+++||+||.|+|..+.
T Consensus 143 -~~~~~~~~a~~vIgAdG~~S~ 163 (397)
T 3oz2_A 143 -NNEIVDVRAKMVIAADGFESE 163 (397)
T ss_dssp -TTEEEEEEEEEEEECCCTTCH
T ss_pred -cccceEEEEeEEEeCCccccH
Confidence 123467999999999996653
No 7
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.65 E-value=1.2e-15 Score=145.04 Aligned_cols=153 Identities=20% Similarity=0.340 Sum_probs=107.6
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCc-c--------cchhh-----------------hc
Q 020815 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGG-Q--------LFSAM-----------------VV 142 (321)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g-~--------~~~~~-----------------~~ 142 (321)
.++||+|||||++|+++|+.|++. |.+|+||||.+.+|+.....+ . .+..+ ..
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~-G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEE-GANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFN 103 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHC-CCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcC
Confidence 468999999999999999999999 999999999887764322111 0 00000 00
Q ss_pred cchHHHHHHHcCCCcccCCCeEEEe---cHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccC
Q 020815 143 RKPAHIFLDELGIDYDEQDNYVVIK---HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHD 219 (321)
Q Consensus 143 ~~~~~~~l~~~g~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~ 219 (321)
.....+|++++|+++........+. ....+.+.|.+.+. +.|++++++++|++|..+++++.+|.+.+
T Consensus 104 ~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~-~~GV~i~~~~~V~~i~~~~~~v~~V~~~~-------- 174 (447)
T 2i0z_A 104 NEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLK-DLGVKIRTNTPVETIEYENGQTKAVILQT-------- 174 (447)
T ss_dssp HHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHH-HTTCEEECSCCEEEEEEETTEEEEEEETT--------
T ss_pred HHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHH-HCCCEEEeCcEEEEEEecCCcEEEEEECC--------
Confidence 1134577888888875442222222 45778888888887 57999999999999998888888887732
Q ss_pred CCCCCCceEEEcCeEEEcCCCCCCC--cc--hhhhhhhhcCC
Q 020815 220 TQSCMDPNVMEAKVVVSSCGHDGPF--GA--TGVKRLKSIGM 257 (321)
Q Consensus 220 ~~~~g~~~~i~a~~VI~AtG~~~~~--~~--~~~~~~~~~g~ 257 (321)
+.+++||.||+|+|+++.. +. .+++.....|+
T Consensus 175 ------G~~i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G~ 210 (447)
T 2i0z_A 175 ------GEVLETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGH 210 (447)
T ss_dssp ------CCEEECSCEEECCCCSSSGGGSCSSHHHHHHHHTTC
T ss_pred ------CCEEECCEEEECCCCCcCCCCCCCcHHHHHHHHCCC
Confidence 2469999999999998732 22 23445555554
No 8
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.65 E-value=1.6e-15 Score=146.50 Aligned_cols=141 Identities=23% Similarity=0.347 Sum_probs=101.5
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccc----------------------hhh------
Q 020815 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLF----------------------SAM------ 140 (321)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~----------------------~~~------ 140 (321)
.+|||||||+|++|+++|+.|++. |++|+||||....||++...+..+ ...
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~-G~~V~vlEk~~~~GG~s~~s~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~ 118 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARA-GADVLVLERTSGWGGATALAGGFIYLGGGTPLQKACGFDDSPENMKTFMMAALGP 118 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCTTGGGSCCCEECCSSCHHHHHTTCCCCHHHHHHHHHHHSCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCCCCCCcchhcCcceecCCCCHHHHHhCCCCCHHHHHHHHHHHhCC
Confidence 369999999999999999999999 999999999988887653222100 000
Q ss_pred ---------hc--cchHHHHHHHcCCCcccC-----------CC-eE---------------------EE---------e
Q 020815 141 ---------VV--RKPAHIFLDELGIDYDEQ-----------DN-YV---------------------VI---------K 167 (321)
Q Consensus 141 ---------~~--~~~~~~~l~~~g~~~~~~-----------~~-~~---------------------~~---------~ 167 (321)
+. ....++|++++|++|... .. .. .. .
T Consensus 119 ~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~~g~e~~~~~~~~~~~~~r~~~~~~~~~~~g~~ 198 (510)
T 4at0_A 119 GADEEKITDYCEGSVEHYNWLVDCGVPFKESFWGEPGWEPPFDDGLMYSGGENAAPFNEIAAPAPRGHVPQMDGKRTGEK 198 (510)
T ss_dssp SCCHHHHHHHHHTHHHHHHHHHHTTCCCCSCEECSSSSSCSSSCSEECCSSTTSTTGGGTSCCCCCEECCCCSSCBTTTB
T ss_pred CCCHHHHHHHHHhhHHHHHHHHHcCCeecccccCCcccccCCcccccccCcccccccccccCcccceeeecccccccccC
Confidence 00 012457888888877543 00 00 00 0
Q ss_pred cH-HHHHHHHHHHHHcCCCcEEEcCceEEEEEEE-CCEEEEEEEeecceecccCCCCCCCceEEEc-CeEEEcCCCCC
Q 020815 168 HA-ALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEA-KVVVSSCGHDG 242 (321)
Q Consensus 168 ~~-~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~-~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a-~~VI~AtG~~~ 242 (321)
.. ..+...|.+.+. +.|++|+++++|++|+.+ +++|+||.+... ++..+|+| |.||+|||+++
T Consensus 199 ~g~~~l~~~L~~~~~-~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~-----------g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 199 GGGYMLMKPLVETAE-KLGVRAEYDMRVQTLVTDDTGRVVGIVAKQY-----------GKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp CTTHHHHHHHHHHHH-HTTCEEECSEEEEEEEECTTCCEEEEEEEET-----------TEEEEEEEEEEEEECCCCCT
T ss_pred CCHHHHHHHHHHHHH-HcCCEEEecCEeEEEEECCCCcEEEEEEEEC-----------CcEEEEEeCCeEEEeCCChh
Confidence 11 267888888887 469999999999999998 789999987531 12357999 49999999987
No 9
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.64 E-value=2.9e-15 Score=146.54 Aligned_cols=143 Identities=22% Similarity=0.301 Sum_probs=103.2
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCcccc-Ccccc----------------hhh----------h
Q 020815 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWL-GGQLF----------------SAM----------V 141 (321)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~-~g~~~----------------~~~----------~ 141 (321)
.++||||||||++|+++|+.|++. |++|+||||.+..||.+.. ++.+. ..+ .
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~-G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~ 203 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDS-GAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNI 203 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 468999999999999999999999 9999999999888765432 22110 000 0
Q ss_pred cc-----------chHHHHHHHcCCCcccC---C-----CeEEE----ecHHHHHHHHHHHHHcCCCcEEEcCceEEEEE
Q 020815 142 VR-----------KPAHIFLDELGIDYDEQ---D-----NYVVI----KHAALFTSTIMSKLLARPNVKLFNAVAAEDLI 198 (321)
Q Consensus 142 ~~-----------~~~~~~l~~~g~~~~~~---~-----~~~~~----~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~ 198 (321)
.. ...++|+.++|++|+.. . ..... .....+...|.+.+. +.|++|+++++|++|+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~-~~gv~i~~~~~v~~l~ 282 (571)
T 1y0p_A 204 NDPALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAV-KRNIDLRMNTRGIEVL 282 (571)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHH-HTTCEEESSEEEEEEE
T ss_pred CCHHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHH-hcCCEEEeCCEeeEeE
Confidence 00 12457788889888531 1 11111 234678888888887 5799999999999999
Q ss_pred EEC-CEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCC
Q 020815 199 VKG-GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (321)
Q Consensus 199 ~~~-~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~ 243 (321)
.++ ++|.||.+.. .+++..+++||.||+|||+++.
T Consensus 283 ~~~~g~v~Gv~~~~----------~~g~~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 283 KDDKGTVKGILVKG----------MYKGYYWVKADAVILATGGFAK 318 (571)
T ss_dssp ECTTSCEEEEEEEE----------TTTEEEEEECSEEEECCCCCTT
T ss_pred EcCCCeEEEEEEEe----------CCCcEEEEECCeEEEeCCCccc
Confidence 887 8999988752 1123357999999999999874
No 10
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.63 E-value=1.9e-15 Score=147.80 Aligned_cols=143 Identities=21% Similarity=0.270 Sum_probs=103.6
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccC-cccch----------------h------------
Q 020815 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLG-GQLFS----------------A------------ 139 (321)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~-g~~~~----------------~------------ 139 (321)
.++||||||||++|+++|+.|++. |++|+||||...+||.+... +.+.. .
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~-G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~ 198 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKA-GANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQ 198 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHH-TCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 479999999999999999999999 99999999998887654322 11100 0
Q ss_pred ---hh------ccchHHHHHHHcCCCcccC---C-----CeEEE----ecHHHHHHHHHHHHHcCCCcEEEcCceEEEEE
Q 020815 140 ---MV------VRKPAHIFLDELGIDYDEQ---D-----NYVVI----KHAALFTSTIMSKLLARPNVKLFNAVAAEDLI 198 (321)
Q Consensus 140 ---~~------~~~~~~~~l~~~g~~~~~~---~-----~~~~~----~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~ 198 (321)
.+ .....++|+.++|++|... . ..... .....+...|.+.+. +.|++|+++++|++|+
T Consensus 199 ~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~-~~gv~i~~~~~v~~l~ 277 (566)
T 1qo8_A 199 NDIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAK-EQGIDTRLNSRVVKLV 277 (566)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHH-HTTCCEECSEEEEEEE
T ss_pred CCHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHH-hcCCEEEeCCEEEEEE
Confidence 00 0012456888889887531 1 11110 135678888888887 5799999999999999
Q ss_pred EEC-CEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCC
Q 020815 199 VKG-GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (321)
Q Consensus 199 ~~~-~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~ 243 (321)
.++ ++|.||.+.. .+++..+++||.||+|||+++.
T Consensus 278 ~~~~g~v~Gv~~~~----------~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 278 VNDDHSVVGAVVHG----------KHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp ECTTSBEEEEEEEE----------TTTEEEEEEEEEEEECCCCCTT
T ss_pred ECCCCcEEEEEEEe----------CCCcEEEEEcCEEEEecCCccc
Confidence 988 8999988752 1123357999999999999885
No 11
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.63 E-value=3.4e-15 Score=140.49 Aligned_cols=164 Identities=20% Similarity=0.325 Sum_probs=112.7
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCc----------ccchhh-----------h---ccc
Q 020815 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGG----------QLFSAM-----------V---VRK 144 (321)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g----------~~~~~~-----------~---~~~ 144 (321)
.++||+|||||++|+++|+.|++. |.+|+|||+.+.+|+.....+ .....+ + ...
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~-G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKR-GRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQ 104 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHH
Confidence 368999999999999999999999 999999999987764321110 001100 0 112
Q ss_pred hHHHHHHHcCCCcccCCC--eEEEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCC
Q 020815 145 PAHIFLDELGIDYDEQDN--YVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQS 222 (321)
Q Consensus 145 ~~~~~l~~~g~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~ 222 (321)
...+++++.|+++..... .........+.+.|.+.+. +.|++++++++|+++..+++. ..|.+.
T Consensus 105 ~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~-~~Gv~i~~~~~V~~i~~~~~~-~~V~~~------------ 170 (417)
T 3v76_A 105 DFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMK-EAGVQLRLETSIGEVERTASG-FRVTTS------------ 170 (417)
T ss_dssp HHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHH-HHTCEEECSCCEEEEEEETTE-EEEEET------------
T ss_pred HHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHH-HCCCEEEECCEEEEEEEeCCE-EEEEEC------------
Confidence 345778888988765432 2223456778888888886 579999999999999988775 334442
Q ss_pred CCCceEEEcCeEEEcCCCCCCC----cchhhhhhhhcCC--cccccCCceeecc
Q 020815 223 CMDPNVMEAKVVVSSCGHDGPF----GATGVKRLKSIGM--IEEVPGMKALDMN 270 (321)
Q Consensus 223 ~g~~~~i~a~~VI~AtG~~~~~----~~~~~~~~~~~g~--~~~~~~~~~~~~~ 270 (321)
+ .+++||.||+|+|+.+.. ...+++....+|+ .+..|...++...
T Consensus 171 --~-g~i~ad~VIlAtG~~S~p~~gs~g~g~~la~~~G~~i~~~~p~l~~~~~~ 221 (417)
T 3v76_A 171 --A-GTVDAASLVVASGGKSIPKMGATGLAYRIAEQFGLPVVETRPALVPLTLD 221 (417)
T ss_dssp --T-EEEEESEEEECCCCSSCGGGTCCCHHHHHHHHTTCCEEEEEEESCCEECC
T ss_pred --C-cEEEeeEEEECCCCccCCCCCCCcHHHHHHHHCCCCEecccceeeeEEec
Confidence 1 379999999999988732 1145566666665 5566666666544
No 12
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.61 E-value=1.8e-15 Score=148.80 Aligned_cols=143 Identities=24% Similarity=0.286 Sum_probs=102.4
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCcc-ccCcccc-----------hhh----------hcc----
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA-WLGGQLF-----------SAM----------VVR---- 143 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~-~~~g~~~-----------~~~----------~~~---- 143 (321)
++||||||||++|++||+.|++. |.+|+||||....++.+ +.+|.+. ... +.+
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~-G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g~~l~d~~~v 96 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEA-GFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDWLGDQDAI 96 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHH
T ss_pred cCCEEEECccHHHHHHHHHHHHC-CCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCHHHHHHHHHHhcCCCCCHHHH
Confidence 68999999999999999999999 99999999986554432 2222110 000 001
Q ss_pred -------chHHHHHHHcCCCcccCCC--eE------------------EEe-----cHHHHHHHHHHHHHcCCCcEEEcC
Q 020815 144 -------KPAHIFLDELGIDYDEQDN--YV------------------VIK-----HAALFTSTIMSKLLARPNVKLFNA 191 (321)
Q Consensus 144 -------~~~~~~l~~~g~~~~~~~~--~~------------------~~~-----~~~~~~~~l~~~~~~~~gv~i~~~ 191 (321)
...++||.++|++|+.... +. ... .+..+...|++++. +.|++|+++
T Consensus 97 ~~l~~~s~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~s~~~g~~~~~~R~~~~~d~tG~~l~~~L~~~~~-~~gv~i~~~ 175 (621)
T 2h88_A 97 HYMTEQAPAAVIELENYGMPFSRTEEGKIYQRAFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSL-RYDTSYFVE 175 (621)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHT-TSCCEEEET
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCCCceeccccCcccccccCCCcceeEEEecCCCHHHHHHHHHHHHH-hCCCEEEEc
Confidence 1245788889998865321 11 000 24577888888886 689999999
Q ss_pred ceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCC
Q 020815 192 VAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (321)
Q Consensus 192 ~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~ 243 (321)
+.|++|+.++++|.||.+.+. .+++...++|+.||+|||+++.
T Consensus 176 ~~v~~Li~~~g~v~Gv~~~~~---------~~G~~~~i~A~~VVlATGG~~~ 218 (621)
T 2h88_A 176 YFALDLLMENGECRGVIALCI---------EDGTIHRFRAKNTVIATGGYGR 218 (621)
T ss_dssp EEEEEEEEETTEEEEEEEEET---------TTCCEEEEEEEEEEECCCCCGG
T ss_pred eEEEEEEEECCEEEEEEEEEc---------CCCcEEEEEcCeEEECCCcccc
Confidence 999999999999999987421 1223458999999999999873
No 13
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.60 E-value=1.2e-14 Score=136.11 Aligned_cols=161 Identities=17% Similarity=0.191 Sum_probs=109.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccc----------cCcccchhhhc--------------cch
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAW----------LGGQLFSAMVV--------------RKP 145 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~----------~~g~~~~~~~~--------------~~~ 145 (321)
+|||+|||||++|+++|+.|++. |.+|+|||+++.+|+... +.+..+..++. ...
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~-G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKL-GKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWD 82 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhC-CCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHH
Confidence 58999999999999999999999 999999999887653221 11111111110 112
Q ss_pred HHHHHHHcCCCcccCCCeEEEe--cHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEE----CCEEEEEEEeecceecccC
Q 020815 146 AHIFLDELGIDYDEQDNYVVIK--HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK----GGRVGGVVTNWALVSMNHD 219 (321)
Q Consensus 146 ~~~~l~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~----~~~v~gv~~~~~~~~~~~~ 219 (321)
..++++++|+++........+. ....+.+.|.+.+. +.|++++++++|+++..+ ++.+ .|.+.
T Consensus 83 ~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~-~~Gv~i~~~~~v~~i~~~~~g~~~~~-~v~~~--------- 151 (401)
T 2gqf_A 83 FISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECD-KYGAKILLRSEVSQVERIQNDEKVRF-VLQVN--------- 151 (401)
T ss_dssp HHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHH-HHTCEEECSCCEEEEEECCSCSSCCE-EEEET---------
T ss_pred HHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHH-HCCCEEEeCCEEEEEEcccCcCCCeE-EEEEC---------
Confidence 4577888998876532222222 56777788888776 579999999999999876 4543 34432
Q ss_pred CCCCCCceEEEcCeEEEcCCCCCCCc--c--hhhhhhhhcCC--cccccCCceee
Q 020815 220 TQSCMDPNVMEAKVVVSSCGHDGPFG--A--TGVKRLKSIGM--IEEVPGMKALD 268 (321)
Q Consensus 220 ~~~~g~~~~i~a~~VI~AtG~~~~~~--~--~~~~~~~~~g~--~~~~~~~~~~~ 268 (321)
+ .+++||.||+|||+.+... . .+++.....|+ .+..|+..++.
T Consensus 152 -----~-g~i~ad~VVlAtG~~s~p~~g~~G~g~~la~~~G~~i~~~~p~l~~~~ 200 (401)
T 2gqf_A 152 -----S-TQWQCKNLIVATGGLSMPGLGATPFGYQIAEQFGIPVIPPRASLVPFT 200 (401)
T ss_dssp -----T-EEEEESEEEECCCCSSCGGGTCCSHHHHHHHHTTCCEEEEEEESCCEE
T ss_pred -----C-CEEECCEEEECCCCccCCCCCCChHHHHHHHHCCCCcccCcceeecee
Confidence 1 3799999999999887321 1 34566666666 45566666654
No 14
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.60 E-value=4.9e-15 Score=146.72 Aligned_cols=142 Identities=18% Similarity=0.150 Sum_probs=100.8
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCcc-ccCccc--------------ch----hh------hcc-
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA-WLGGQL--------------FS----AM------VVR- 143 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~-~~~g~~--------------~~----~~------~~~- 143 (321)
++||||||||++|++||+.|++. |.+|+||||....+|.+ +..|.+ +. .. ...
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~-G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~g~~ds~~~~~~dt~~~g~~~~d~ 83 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQK-GLSTIVLSLIPVKRSHSAAAQGGMQASLGNSKMSDGDNEDLHFMDTVKGSDWGCDQ 83 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTT-TCCEEEECSSCGGGSGGGGCCSCEECCCCCSGGGTTCCHHHHHHHHHHHTTTCSCH
T ss_pred cccEEEECchHHHHHHHHHHHHC-CCcEEEEeccCCCCCcccccCCCeEeccCCcccCCCCCHHHHHHHHHHhcCCCCCH
Confidence 68999999999999999999999 99999999986553322 211110 00 00 000
Q ss_pred ----------chHHHHHHHcCCCcccCCCeE---------------------E------------E-----ecHHHHHHH
Q 020815 144 ----------KPAHIFLDELGIDYDEQDNYV---------------------V------------I-----KHAALFTST 175 (321)
Q Consensus 144 ----------~~~~~~l~~~g~~~~~~~~~~---------------------~------------~-----~~~~~~~~~ 175 (321)
...++||.++|++|....... + . ..+..+...
T Consensus 84 ~~v~~~~~~s~~~i~~L~~~Gv~f~~~~~G~~~~~~~g~~~~~l~~~e~~~~~~~~~~gg~~~~R~~~~~d~tG~~l~~~ 163 (660)
T 2bs2_A 84 KVARMFVNTAPKAIRELAAWGVPWTRIHKGDRMAIINAQKTTITEEDFRHGLIHSRDFGGTKKWRTCYTADATGHTMLFA 163 (660)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCBCCSEEEECCCSSCCCEEEECGGGTTSBCCBCCTTCSSCCEECSTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCceecCCCcccccccccccccccchhhhhhhccccccccccceeEeeCCCCHHHHHHH
Confidence 124578889999886532110 0 0 114567788
Q ss_pred HHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 176 IMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 176 l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
|++.+. +.|++|++++.|++|+.++++|.||.+.+. .+|+...++||.||+|||+++
T Consensus 164 L~~~a~-~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~---------~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 164 VANECL-KLGVSIQDRKEAIALIHQDGKCYGAVVRDL---------VTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHHH-HHTCEEECSEEEEEEEEETTEEEEEEEEET---------TTCCEEEEECSEEEECCCCCG
T ss_pred HHHHHH-hCCCEEEECcEEEEEEecCCEEEEEEEEEC---------CCCcEEEEEcCEEEEccCcch
Confidence 888887 469999999999999999999999887421 112345799999999999987
No 15
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.58 E-value=2.5e-14 Score=132.99 Aligned_cols=131 Identities=21% Similarity=0.289 Sum_probs=95.0
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcc-----------
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYD----------- 158 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~----------- 158 (321)
++||+|||||++|+++|+.|++. |++|+|||+...+|+....++.... +.++++|+...
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~-G~~V~l~E~~~~~g~~~~~~~~~~~---------~~~~~lg~~~~~~~~~~~~~~~ 73 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKY-GLKTLMIEKRPEIGSPVRCGEGLSK---------GILNEADIKADRSFIANEVKGA 73 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSTTCSCCSCCEEET---------HHHHHTTCCCCTTTEEEEESEE
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCCCCCCCcccccccCH---------HHHHHcCCCCChHHhhhhcceE
Confidence 58999999999999999999999 9999999999866653333322211 23344443111
Q ss_pred ----cC-------------CCeEEEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCC
Q 020815 159 ----EQ-------------DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQ 221 (321)
Q Consensus 159 ----~~-------------~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~ 221 (321)
.. .......+...+.+.|.+.+. +.|++++.+++|+++..+++++.+|.+...
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~--------- 143 (397)
T 3cgv_A 74 RIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAA-KAGADVWVKSPALGVIKENGKVAGAKIRHN--------- 143 (397)
T ss_dssp EEECTTCSSCEEEC-----CCCEEEECHHHHHHHHHHHHH-HHTCEEESSCCEEEEEEETTEEEEEEEEET---------
T ss_pred EEEcCCCCEEEEEeccccCCceeEEEeHHHHHHHHHHHHH-hCCCEEEECCEEEEEEEeCCEEEEEEEEEC---------
Confidence 00 111234456778888888887 479999999999999999999888877420
Q ss_pred CCCCceEEEcCeEEEcCCCCC
Q 020815 222 SCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 222 ~~g~~~~i~a~~VI~AtG~~~ 242 (321)
++..+++||.||+|+|..+
T Consensus 144 --~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 144 --NEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp --TEEEEEEEEEEEECCCTTC
T ss_pred --CeEEEEEcCEEEECCCcch
Confidence 1346899999999999665
No 16
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.57 E-value=9.1e-15 Score=142.00 Aligned_cols=144 Identities=26% Similarity=0.377 Sum_probs=91.1
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCcc-ccCcccc-------------hhhh------c------
Q 020815 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA-WLGGQLF-------------SAMV------V------ 142 (321)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~-~~~g~~~-------------~~~~------~------ 142 (321)
.++||||||||++|+++|+.|++ |.+|+||||....+|++ +.+|.+. ...+ .
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~--G~~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~ds~~~~~~d~l~~g~g~~d~~~v~ 84 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD--QHQVIVLSKGPVTEGSTFYAQGGIAAVFDETDSIDSHVEDTLIAGAGICDRHAVE 84 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT--TSCEEEECSSCTTC-------------CCSHHHHHHHHHHHHHHTTTCCCHHHHH
T ss_pred CCCCEEEECccHHHHHHHHHHhc--CCcEEEEECCCCCCCChhhcCCCEEEecCCCCCHHHHHHHHHHhhcccCCHHHHH
Confidence 36899999999999999999998 79999999987766543 2222111 0000 0
Q ss_pred -----cchHHHHHHHcCCCcccCC------CeEE----------Ee-----cHHHHHHHHHHHHHcCCCcEEEcCceEEE
Q 020815 143 -----RKPAHIFLDELGIDYDEQD------NYVV----------IK-----HAALFTSTIMSKLLARPNVKLFNAVAAED 196 (321)
Q Consensus 143 -----~~~~~~~l~~~g~~~~~~~------~~~~----------~~-----~~~~~~~~l~~~~~~~~gv~i~~~~~v~~ 196 (321)
....++|+.++|++|+... .+.. .. .+..+...|.+++.+..|+++++++.|++
T Consensus 85 ~~~~~~~~~i~~l~~~Gv~f~~~~~~~~~g~~~~~~~gg~~~~r~~~~~d~~g~~l~~~L~~~~~~~~gv~i~~~~~v~~ 164 (540)
T 1chu_A 85 FVASNARSCVQWLIDQGVLFDTHIQPNGEESYHLTREGGHSHRRILHAADATGREVETTLVSKALNHPNIRVLERTNAVD 164 (540)
T ss_dssp HHHHHHHHHHHHHHHTTCC--------------------------------------CCCHHHHHHCTTEEEECSEEEEE
T ss_pred HHHHhHHHHHHHHHHcCCCcccCcccCcCCccccccccccccCeEEEeCCCCHHHHHHHHHHHHHcCCCCEEEeCcEEEE
Confidence 1134578889999886532 1110 00 12345566777777557999999999999
Q ss_pred EEE-ECC------EEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCC
Q 020815 197 LIV-KGG------RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (321)
Q Consensus 197 l~~-~~~------~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~ 243 (321)
|+. +++ +|.||.+.+. .+++..+++||.||+|||+++.
T Consensus 165 L~~~~~g~~~~~~~v~Gv~~~~~---------~~G~~~~i~A~~VVlAtGg~~~ 209 (540)
T 1chu_A 165 LIVSDKIGLPGTRRVVGAWVWNR---------NKETVETCHAKAVVLATGGASK 209 (540)
T ss_dssp EEEGGGTTCCSSCBEEEEEEEET---------TTTEEEEEECSEEEECCCCCGG
T ss_pred EEEcCCCCcccCCEEEEEEEEEc---------CCCcEEEEEcCeEEECCCCccc
Confidence 998 546 8999887530 1123358999999999999873
No 17
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.57 E-value=6.4e-15 Score=145.86 Aligned_cols=145 Identities=15% Similarity=0.293 Sum_probs=103.6
Q ss_pred cccEEEECCChHHHHHHHHhhcC-----CCCeEEEEeccCCCCCccccCc--ccc--------hh---------------
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKN-----PNIQIAIIEQSVSPGGGAWLGG--QLF--------SA--------------- 139 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~-----~G~~V~liEk~~~~gg~~~~~g--~~~--------~~--------------- 139 (321)
++||||||+|++||+||+.|++. ||++|+||||....+++++..| .+. ..
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~s~s~AqG~~gi~a~l~~ds~e~~~~~~~~~~~gl~d~ 101 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLERSGAVAQGLSAINTYLGDNNADDYVRMVRTDLMGLVRE 101 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTTCSTTTTCEEEECCCCTTSCHHHHHHHHHHHTTTCCCH
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCCCcccccCcchheeecCCCCHHHHHHHHHHhcCCCccH
Confidence 68999999999999999999985 4899999999876655555544 210 00
Q ss_pred ----hhcc--chHHHHHHHcCCCcccC-CC--eE-------------------------EEecHHHHHHHHHHHHHcC-C
Q 020815 140 ----MVVR--KPAHIFLDELGIDYDEQ-DN--YV-------------------------VIKHAALFTSTIMSKLLAR-P 184 (321)
Q Consensus 140 ----~~~~--~~~~~~l~~~g~~~~~~-~~--~~-------------------------~~~~~~~~~~~l~~~~~~~-~ 184 (321)
.+.. ...++||.++|++|+.. .. +. ....+..+...|.+++.+. .
T Consensus 102 ~~v~~l~~~a~~~i~~L~~~Gv~f~~~~~~G~~~~g~~~~~fg~~~~~gg~~~~r~~~~~~~~G~~i~~~L~~~a~~~~~ 181 (662)
T 3gyx_A 102 DLIYDLGRHVDDSVHLFEEWGLPVWIKDEHGHNLDGAQAKAAGKSLRNGDKPVRSGRWQIMINGESYKVIVAEAAKNALG 181 (662)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCBCEECSSSCEECHHHHHHHTCCTTTTCCBCCSSTTCEEEEETSHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCceecCCCCccccchhhhccccccccCccccccceecccCCHHHHHHHHHHHHHhcCC
Confidence 0000 13457889999998753 11 11 1122446667777777643 2
Q ss_pred CcEEEcCceEEEEEEECC---EEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCC
Q 020815 185 NVKLFNAVAAEDLIVKGG---RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (321)
Q Consensus 185 gv~i~~~~~v~~l~~~~~---~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~ 243 (321)
|+++++++.+++|+.+++ +|.||.+.+. .+++...|+|+.||+||||++.
T Consensus 182 gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~---------~~g~~~~i~Ak~VVLATGG~g~ 234 (662)
T 3gyx_A 182 QDRIIERIFIVKLLLDKNTPNRIAGAVGFNL---------RANEVHIFKANAMVVACGGAVN 234 (662)
T ss_dssp TTTEECSEEECCCEECSSSTTBEEEEEEEES---------SSSCEEEEECSEEEECCCCBCS
T ss_pred CcEEEEceEEEEEEEeCCccceEEEEEEEEc---------CCCcEEEEEeCEEEECCCcccc
Confidence 999999999999999877 9999987431 1224568999999999999873
No 18
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.56 E-value=5.1e-14 Score=137.73 Aligned_cols=143 Identities=21% Similarity=0.318 Sum_probs=102.0
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccC-cccc----------------hhh-----------
Q 020815 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLG-GQLF----------------SAM----------- 140 (321)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~-g~~~----------------~~~----------- 140 (321)
.++||+|||+|++|+++|+.|++. |.+|+|||+.+.+||.+... +.+. ..+
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~-g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~ 203 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDA-GAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNI 203 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSS-SCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 368999999999999999999999 99999999998887654322 1110 000
Q ss_pred ----h------ccchHHHHHHHcCCCcccC---CC--eE--EE-----ecHHHHHHHHHHHHHcCCCcEEEcCceEEEEE
Q 020815 141 ----V------VRKPAHIFLDELGIDYDEQ---DN--YV--VI-----KHAALFTSTIMSKLLARPNVKLFNAVAAEDLI 198 (321)
Q Consensus 141 ----~------~~~~~~~~l~~~g~~~~~~---~~--~~--~~-----~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~ 198 (321)
+ .....++|+.+.|++|+.. .. +. .. .....+...|.+.+. +.|++++++++|++|+
T Consensus 204 ~~~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~-~~gv~i~~~t~v~~l~ 282 (572)
T 1d4d_A 204 NDPELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAV-KRGTDIRLNSRVVRIL 282 (572)
T ss_dssp SCHHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHH-HTTCEEESSEEEEEEE
T ss_pred CCHHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHH-HcCCeEEecCEEEEEE
Confidence 0 0012457888888887531 10 11 11 125677888888887 5699999999999999
Q ss_pred EEC-CEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCC
Q 020815 199 VKG-GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (321)
Q Consensus 199 ~~~-~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~ 243 (321)
.++ ++|.||.+.. .+++..+++||.||+|||+++.
T Consensus 283 ~~~~g~v~GV~~~~----------~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 283 EDASGKVTGVLVKG----------EYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp EC--CCEEEEEEEE----------TTTEEEEEECSEEEECCCCCTT
T ss_pred ECCCCeEEEEEEEe----------CCCcEEEEEcCEEEEeCCCCcc
Confidence 887 8999988752 1123357999999999999874
No 19
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.56 E-value=2.5e-14 Score=140.25 Aligned_cols=142 Identities=20% Similarity=0.315 Sum_probs=100.1
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCcc-ccCcccc-----------h----h------hhcc----
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA-WLGGQLF-----------S----A------MVVR---- 143 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~-~~~g~~~-----------~----~------~~~~---- 143 (321)
++||||||||++|+++|+.|++. |.+|+||||....+|.+ +..|.+. . . ....
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~-G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v 85 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQS-GQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAI 85 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHHHHHHHHHHhcCCCCCHHHH
Confidence 68999999999999999999999 99999999987654332 2211110 0 0 0000
Q ss_pred -------chHHHHHHHcCCCcccCCC--eEE-----------------Ee-----cHHHHHHHHHHHHHcCCCcEEEcCc
Q 020815 144 -------KPAHIFLDELGIDYDEQDN--YVV-----------------IK-----HAALFTSTIMSKLLARPNVKLFNAV 192 (321)
Q Consensus 144 -------~~~~~~l~~~g~~~~~~~~--~~~-----------------~~-----~~~~~~~~l~~~~~~~~gv~i~~~~ 192 (321)
...++|+.++|++|+.... +.. .. .+..+...|.+++. +.|++|++++
T Consensus 86 ~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~~~~d~~g~~l~~~L~~~~~-~~gv~i~~~~ 164 (588)
T 2wdq_A 86 EYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNL-KNHTTIFSEW 164 (588)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTCSBCCCEECSTTCHHHHHHHHHHHHHH-HTTCEEEETE
T ss_pred HHHHHhHHHHHHHHHHcCCCcccCCCCcEeeeecCCccccccccCcceEEEcCCCCHHHHHHHHHHHHH-hCCCEEEeCc
Confidence 1245688889998865311 110 00 13567788888887 4699999999
Q ss_pred eEEEEEEE-CCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 193 AAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 193 ~v~~l~~~-~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
.|++|+.+ +++|.||.+.+. .+++..+++|+.||+|||+++
T Consensus 165 ~v~~L~~~~~g~v~Gv~~~~~---------~~g~~~~i~A~~VVlAtGg~~ 206 (588)
T 2wdq_A 165 YALDLVKNQDGAVVGCTALCI---------ETGEVVYFKARATVLATGGAG 206 (588)
T ss_dssp EEEEEEECTTSCEEEEEEEET---------TTCCEEEEEEEEEEECCCCCG
T ss_pred EEEEEEECCCCEEEEEEEEEc---------CCCeEEEEEcCEEEECCCCCc
Confidence 99999986 788999887421 112345799999999999976
No 20
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.56 E-value=2.8e-14 Score=140.21 Aligned_cols=144 Identities=22% Similarity=0.264 Sum_probs=99.8
Q ss_pred cccEEEECCChHHHHHHHHhhcCCC--CeEEEEeccCCCCCcc-ccCcccc--------------hh-----hhcc----
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPN--IQIAIIEQSVSPGGGA-WLGGQLF--------------SA-----MVVR---- 143 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G--~~V~liEk~~~~gg~~-~~~g~~~--------------~~-----~~~~---- 143 (321)
++||||||||++|+++|+.|++. | .+|+||||....++.+ +..+.+. +. .+..
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~-G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v 83 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQA-NPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVV 83 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHH-CTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhc-CCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHH
Confidence 58999999999999999999998 8 9999999986544322 2222110 00 0000
Q ss_pred -------chHHHHHHHcCCCcccCCC--eE----------EEe-----cHHHHHHHHHHHHHcCCCcEEEcCceEEEEEE
Q 020815 144 -------KPAHIFLDELGIDYDEQDN--YV----------VIK-----HAALFTSTIMSKLLARPNVKLFNAVAAEDLIV 199 (321)
Q Consensus 144 -------~~~~~~l~~~g~~~~~~~~--~~----------~~~-----~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~ 199 (321)
...++||.++|++|+.... +. ... .+..+...|++++.+..++++++++.|++|+.
T Consensus 84 ~~~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~ 163 (602)
T 1kf6_A 84 DYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILV 163 (602)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEEE
Confidence 1345778889998865321 10 000 14577788888887433399999999999999
Q ss_pred ECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCC
Q 020815 200 KGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (321)
Q Consensus 200 ~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~ 243 (321)
++++|.||.+.+. .+|+..+++|+.||+|||+++.
T Consensus 164 ~~g~v~Gv~~~~~---------~~G~~~~i~A~~VVlAtGg~s~ 198 (602)
T 1kf6_A 164 DDGHVRGLVAMNM---------MEGTLVQIRANAVVMATGGAGR 198 (602)
T ss_dssp ETTEEEEEEEEET---------TTTEEEEEECSCEEECCCCCGG
T ss_pred eCCEEEEEEEEEc---------CCCcEEEEEcCeEEECCCCCcc
Confidence 9999999876420 1123347999999999999773
No 21
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.54 E-value=2.9e-14 Score=141.26 Aligned_cols=145 Identities=20% Similarity=0.335 Sum_probs=98.2
Q ss_pred CcccEEEECCChHHHHHHHHhh---c-CCCCeEEEEeccCCCCCccccCccc-----c------------hhh-------
Q 020815 89 ADTDVVVVGAGSAGLSCAYELS---K-NPNIQIAIIEQSVSPGGGAWLGGQL-----F------------SAM------- 140 (321)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La---~-~~G~~V~liEk~~~~gg~~~~~g~~-----~------------~~~------- 140 (321)
.++||||||||++|++||+.|+ + . |.+|+||||....+++.+.+|.. + ...
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~-G~~V~vlEK~~~~~s~~~a~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~ 99 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLG-GLKVTLVEKAAVERSGAVAQGLSAINTYIDLTGRSERQNTLEDYVRYVTLD 99 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTT-TCCEEEECSSCTTTCSTTTTCEEEESCCCCSSSSBSCCCCHHHHHHHHHHH
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhC-CCeEEEEeCcCCCCCcceecccccccchhhHHHhcCCCCCHHHHHHHHHHH
Confidence 3689999999999999999999 6 8 99999999987543333322210 0 000
Q ss_pred ---hcc-----------chHHHHHHHcCCCcccCCC--eE------EEecHHHHHHHHHHHHHcCCCc-EEEcCceEEEE
Q 020815 141 ---VVR-----------KPAHIFLDELGIDYDEQDN--YV------VIKHAALFTSTIMSKLLARPNV-KLFNAVAAEDL 197 (321)
Q Consensus 141 ---~~~-----------~~~~~~l~~~g~~~~~~~~--~~------~~~~~~~~~~~l~~~~~~~~gv-~i~~~~~v~~l 197 (321)
+.. ...++||.++|++|..... +. ....+..+...|.+.+.+..|+ ++++++.|++|
T Consensus 100 g~~l~d~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~~~~~~g~~~~~~l~~~~~~~~gv~~i~~~~~v~~L 179 (643)
T 1jnr_A 100 MMGLAREDLVADYARHVDGTVHLFEKWGLPIWKTPDGKYVREGQWQIMIHGESYKPIIAEAAKMAVGEENIYERVFIFEL 179 (643)
T ss_dssp TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCBCBCTTSCBCBSSSSCEEEEETTHHHHHHHHHHHHHCGGGEECSEEEEEE
T ss_pred hcCcCcHHHHHHHHHHHHHHHHHHHHcCCcceeCCCCCccCCCccccCCCcHHHHHHHHHHHHhcCCCcEEEecCEEEEE
Confidence 000 1245788889999865321 11 1112334566666666532389 99999999999
Q ss_pred EEECC---EEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCC
Q 020815 198 IVKGG---RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (321)
Q Consensus 198 ~~~~~---~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~ 243 (321)
+.+++ +|.||.+.+. .+++...++|+.||+|||+++.
T Consensus 180 ~~~~~~~g~v~Gv~~~~~---------~~g~~~~i~A~~VVlAtGG~~~ 219 (643)
T 1jnr_A 180 LKDNNDPNAVAGAVGFSV---------REPKFYVFKAKAVILATGGATL 219 (643)
T ss_dssp EECTTCTTBEEEEEEEES---------SSSCEEEEECSEEEECCCCBCS
T ss_pred EEcCCccceeEEEEEEEe---------cCCcEEEEEcCEEEECCCcccc
Confidence 99877 9999886320 1123357999999999999874
No 22
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.53 E-value=6.7e-14 Score=128.42 Aligned_cols=139 Identities=17% Similarity=0.184 Sum_probs=88.2
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCC-Cccc-cCcccch-----------hhhcc-------------
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPG-GGAW-LGGQLFS-----------AMVVR------------- 143 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~g-g~~~-~~g~~~~-----------~~~~~------------- 143 (321)
++||+|||||++|+++|++|++. |++|+||||+..++ +.++ ..+.+.. .+...
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~~-G~~V~vlE~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAAG-GHEVLVAEAAEGIGTGTSSRNSEVIHAGIYYPADSLKARLCVRGKHLLYEYCAARG 82 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSSCSTTSSSCCEECCCCSSCTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCCCCccCcCCccccccCccCCCCCHhHHHHHHHHHHHHHHHHHcC
Confidence 58999999999999999999999 99999999986443 2222 1111100 00000
Q ss_pred --------------c-------hHHHHHHHcCCC-cccC---------CC------e----EEEecHHHHHHHHHHHHHc
Q 020815 144 --------------K-------PAHIFLDELGID-YDEQ---------DN------Y----VVIKHAALFTSTIMSKLLA 182 (321)
Q Consensus 144 --------------~-------~~~~~l~~~g~~-~~~~---------~~------~----~~~~~~~~~~~~l~~~~~~ 182 (321)
. ...+++...|++ +... .. . ....+...+...|.+.+.
T Consensus 83 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~- 161 (369)
T 3dme_A 83 VPHQRLGKLIVATSDAEASQLDSIARRAGANGVDDLQHIDGAAARRLEPALHCTAALVSPSTGIVDSHALMLAYQGDAE- 161 (369)
T ss_dssp CCEECCCEEEEECSHHHHTTHHHHHHHHHHTTCCCCEEEEHHHHHHHCTTCCCSEEEEETTCEEECHHHHHHHHHHHHH-
T ss_pred CCcccCCEEEEecCHHHHHHHHHHHHHHHHcCCCceeecCHHHHHHhCCCceeeeeeECCCCEEECHHHHHHHHHHHHH-
Confidence 0 011222334433 1110 00 0 012345677888888886
Q ss_pred CCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 183 RPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 183 ~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
+.|++++++++|++|..+++.+..|.+.+ |+..+++||.||+|+|.++
T Consensus 162 ~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~------------g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 162 SDGAQLVFHTPLIAGRVRPEGGFELDFGG------------AEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HTTCEEECSCCEEEEEECTTSSEEEEECT------------TSCEEEEEEEEEECCGGGH
T ss_pred HCCCEEECCCEEEEEEEcCCceEEEEECC------------CceeEEEeCEEEECCCcch
Confidence 57999999999999998776534455521 2336899999999999553
No 23
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.53 E-value=1.2e-13 Score=133.35 Aligned_cols=142 Identities=17% Similarity=0.228 Sum_probs=95.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchh----hhccchHHHHHHHcCCCccc------
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSA----MVVRKPAHIFLDELGIDYDE------ 159 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~----~~~~~~~~~~l~~~g~~~~~------ 159 (321)
++||+|||||++|+++|+.|++. |++|+|||+...+... .+...... .+......+.+...+.....
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~-G~~V~liE~~~~~~~~--~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~ 83 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMR-GHRVLLLEREAFPRHQ--IGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRW 83 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT-TCCEEEECSSCSSCCC--SCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEEC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-CCCEEEEccCCCCCCC--CCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEe
Confidence 58999999999999999999999 9999999998643211 11111110 01000111222222222110
Q ss_pred -----------------CCCeEEEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCC
Q 020815 160 -----------------QDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQS 222 (321)
Q Consensus 160 -----------------~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~ 222 (321)
...+....+...+.+.|.+.+. +.|++++++++|+++..+++++.+|.+.. .
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~-~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~----------~ 152 (512)
T 3e1t_A 84 GKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSE-RKGVDVRERHEVIDVLFEGERAVGVRYRN----------T 152 (512)
T ss_dssp SSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHH-HTTCEEESSCEEEEEEEETTEEEEEEEEC----------S
T ss_pred cCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHH-hCCCEEEcCCEEEEEEEECCEEEEEEEEe----------C
Confidence 0122334566788888888887 48999999999999999999998887743 1
Q ss_pred CCCceEEEcCeEEEcCCCCCCCc
Q 020815 223 CMDPNVMEAKVVVSSCGHDGPFG 245 (321)
Q Consensus 223 ~g~~~~i~a~~VI~AtG~~~~~~ 245 (321)
+|+..+++||.||+|+|..+.+.
T Consensus 153 dG~~~~i~ad~VI~AdG~~S~vr 175 (512)
T 3e1t_A 153 EGVELMAHARFIVDASGNRTRVS 175 (512)
T ss_dssp SSCEEEEEEEEEEECCCTTCSSG
T ss_pred CCCEEEEEcCEEEECCCcchHHH
Confidence 22335899999999999877543
No 24
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.53 E-value=1.2e-13 Score=131.32 Aligned_cols=135 Identities=24% Similarity=0.384 Sum_probs=94.8
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCC-CccccCcccchhhhccchHHHHHHHcCCCccc---------
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPG-GGAWLGGQLFSAMVVRKPAHIFLDELGIDYDE--------- 159 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~g-g~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~--------- 159 (321)
++||+|||||++|+++|+.|++. |++|+|||+...+. |..+.+..+ ..+.++++|+....
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~-G~~V~vlE~~~~~~~g~~~~g~~l---------~~~~l~~lg~~~~~~~~~~~~~~ 75 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRR-GLKILLVDSKPWNRIGDKPCGDAV---------SKAHFDKLGMPYPKGEELENKIN 75 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSS-SCCEEEECSSCGGGTTCSCCCCEE---------EHHHHHHTTCCCCCGGGEEEEEE
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCCCCCCCcccccccc---------cHHHHHHhcCCCCchHHHHhhhc
Confidence 58999999999999999999999 99999999986542 222222211 12344444432110
Q ss_pred -------CC-------CeEEEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCC
Q 020815 160 -------QD-------NYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMD 225 (321)
Q Consensus 160 -------~~-------~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~ 225 (321)
.. ......+...+.+.|.+.+. +.|++++++++|+++..+++++.+|.+... .+|+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~a~-~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~---------~~G~ 145 (453)
T 3atr_A 76 GIKLYSPDMQTVWTVNGEGFELNAPLYNQRVLKEAQ-DRGVEIWDLTTAMKPIFEDGYVKGAVLFNR---------RTNE 145 (453)
T ss_dssp EEEEECTTSSCEEEEEEEEEEECHHHHHHHHHHHHH-HTTCEEESSEEEEEEEEETTEEEEEEEEET---------TTTE
T ss_pred ceEEECCCCceEEeECCCcEEEcHHHHHHHHHHHHH-HcCCEEEeCcEEEEEEEECCEEEEEEEEEc---------CCCc
Confidence 00 01123456778888888887 479999999999999999998888776420 0123
Q ss_pred ceEEEcCeEEEcCCCCCCC
Q 020815 226 PNVMEAKVVVSSCGHDGPF 244 (321)
Q Consensus 226 ~~~i~a~~VI~AtG~~~~~ 244 (321)
..+++||.||+|+|..+..
T Consensus 146 ~~~~~ad~VV~AdG~~s~v 164 (453)
T 3atr_A 146 ELTVYSKVVVEATGYSRSF 164 (453)
T ss_dssp EEEEECSEEEECCGGGCTT
T ss_pred eEEEEcCEEEECcCCchhh
Confidence 3589999999999977654
No 25
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.52 E-value=1.2e-13 Score=132.16 Aligned_cols=135 Identities=18% Similarity=0.277 Sum_probs=96.1
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCcc-ccCccc---------chhhh----------c---------
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA-WLGGQL---------FSAMV----------V--------- 142 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~-~~~g~~---------~~~~~----------~--------- 142 (321)
||||||+|++|+++|+.|++. |++|+||||. ..+|.+ +.+|.+ +...+ .
T Consensus 1 DVvVIG~G~AGl~aA~~la~~-G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~ 78 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRA-GKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVT 78 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHC-CCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHH
Confidence 899999999999999999999 9999999998 555543 322221 10000 0
Q ss_pred --cchHHHHHHHcCCCcccC----C--CeEEE-----ecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEE
Q 020815 143 --RKPAHIFLDELGIDYDEQ----D--NYVVI-----KHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVT 209 (321)
Q Consensus 143 --~~~~~~~l~~~g~~~~~~----~--~~~~~-----~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~ 209 (321)
....++++.++|++|+.. . .+... .....+...|.+++. +.|++++++++| +|..+++++.|+.+
T Consensus 79 ~~~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~-~~gv~i~~~~~v-~l~~~~~~v~Gv~v 156 (472)
T 2e5v_A 79 SEAKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAR-EEGIPIIEDRLV-EIRVKDGKVTGFVT 156 (472)
T ss_dssp HHHHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHH-HTTCCEECCCEE-EEEEETTEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHH-hCCCEEEECcEE-EEEEeCCEEEEEEE
Confidence 013457788899988751 1 11111 124567788888884 689999999999 99989999988876
Q ss_pred eecceecccCCCCCCCceEEEcCeEEEcCCCCCC
Q 020815 210 NWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (321)
Q Consensus 210 ~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~ 243 (321)
.. +..+++||.||+|||+++.
T Consensus 157 ~~-------------~~g~~~a~~VVlAtGg~~~ 177 (472)
T 2e5v_A 157 EK-------------RGLVEDVDKLVLATGGYSY 177 (472)
T ss_dssp TT-------------TEEECCCSEEEECCCCCGG
T ss_pred Ee-------------CCCeEEeeeEEECCCCCcc
Confidence 32 1135779999999998873
No 26
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.51 E-value=3.7e-13 Score=129.56 Aligned_cols=142 Identities=20% Similarity=0.212 Sum_probs=94.4
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCC------------
Q 020815 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGID------------ 156 (321)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~------------ 156 (321)
.++||+|||||++|+++|+.|++. |++|+||||...++... .+ ........+.++++|+.
T Consensus 10 ~~~dVlIVGaGpaGl~~A~~La~~-G~~v~vlE~~~~~~~~~--r~-----~~l~~~~~~~l~~lGl~~~~~~~~~~~~~ 81 (500)
T 2qa1_A 10 SDAAVIVVGAGPAGMMLAGELRLA-GVEVVVLERLVERTGES--RG-----LGFTARTMEVFDQRGILPRFGEVETSTQG 81 (500)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCCC-CCCC--CS-----EEECHHHHHHHHTTTCGGGGCSCCBCCEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCCCCCCCC--Cc-----ceECHHHHHHHHHCCCHHHHHhccccccc
Confidence 479999999999999999999999 99999999987654221 01 11122333444444431
Q ss_pred ------cc--cC---CCeEEEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCC
Q 020815 157 ------YD--EQ---DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMD 225 (321)
Q Consensus 157 ------~~--~~---~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~ 225 (321)
++ .. ..+....+...+.+.|.+.+. +.|++++++++|+++..+++.+. +.+.++ +|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~-~~gv~v~~~~~v~~i~~~~~~v~-v~~~~~----------~g- 148 (500)
T 2qa1_A 82 HFGGLPIDFGVLEGAWQAAKTVPQSVTETHLEQWAT-GLGADIRRGHEVLSLTDDGAGVT-VEVRGP----------EG- 148 (500)
T ss_dssp EETTEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHH-HTTCEEEETCEEEEEEEETTEEE-EEEEET----------TE-
T ss_pred cccceecccccCCCCCCceeecCHHHHHHHHHHHHH-HCCCEEECCcEEEEEEEcCCeEE-EEEEcC----------CC-
Confidence 00 00 012234456777788888876 46999999999999999888655 444321 11
Q ss_pred ceEEEcCeEEEcCCCCCCCcchhhhhhhhcC
Q 020815 226 PNVMEAKVVVSSCGHDGPFGATGVKRLKSIG 256 (321)
Q Consensus 226 ~~~i~a~~VI~AtG~~~~~~~~~~~~~~~~g 256 (321)
..+++||+||.|+|.+ |.+|+..++.
T Consensus 149 ~~~~~a~~vVgADG~~-----S~VR~~lg~~ 174 (500)
T 2qa1_A 149 KHTLRAAYLVGCDGGR-----SSVRKAAGFD 174 (500)
T ss_dssp EEEEEESEEEECCCTT-----CHHHHHTTCC
T ss_pred CEEEEeCEEEECCCcc-----hHHHHHcCCC
Confidence 2479999999999954 4455554443
No 27
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.50 E-value=4.2e-13 Score=129.12 Aligned_cols=142 Identities=24% Similarity=0.266 Sum_probs=95.9
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCC------------
Q 020815 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGID------------ 156 (321)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~------------ 156 (321)
.++||+|||||++|+++|+.|++. |++|+||||...+.... .+ ........+.++++|+.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~-G~~v~vlE~~~~~~~~~--r~-----~~l~~~~~~~l~~lGl~~~~~~~~~~~~~ 82 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLG-GVDVMVLEQLPQRTGES--RG-----LGFTARTMEVFDQRGILPAFGPVETSTQG 82 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESCSSCCCCC--CS-----EEECHHHHHHHHHTTCGGGGCSCCEESEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCCCCCCCC--ce-----eEECHHHHHHHHHCCCHHHHHhccccccc
Confidence 479999999999999999999999 99999999987653211 01 11222334455555442
Q ss_pred ------ccc-----CCCeEEEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCC
Q 020815 157 ------YDE-----QDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMD 225 (321)
Q Consensus 157 ------~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~ 225 (321)
++. ...+....+...+.+.|.+.+. +.|++++++++|+++..+++.+. |.+.++ +|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~-~~gv~v~~~~~v~~i~~~~~~v~-v~~~~~----------~g- 149 (499)
T 2qa2_A 83 HFGGRPVDFGVLEGAHYGVKAVPQSTTESVLEEWAL-GRGAELLRGHTVRALTDEGDHVV-VEVEGP----------DG- 149 (499)
T ss_dssp EETTEEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHH-HTTCEEEESCEEEEEEECSSCEE-EEEECS----------SC-
T ss_pred eecceecccccCCCCCCceEecCHHHHHHHHHHHHH-hCCCEEEcCCEEEEEEEeCCEEE-EEEEcC----------CC-
Confidence 000 0112344566778888888887 46999999999999998877554 433220 11
Q ss_pred ceEEEcCeEEEcCCCCCCCcchhhhhhhhcC
Q 020815 226 PNVMEAKVVVSSCGHDGPFGATGVKRLKSIG 256 (321)
Q Consensus 226 ~~~i~a~~VI~AtG~~~~~~~~~~~~~~~~g 256 (321)
..+++||+||.|+|.+ |.+|+..++.
T Consensus 150 ~~~~~a~~vVgADG~~-----S~VR~~lg~~ 175 (499)
T 2qa2_A 150 PRSLTTRYVVGCDGGR-----STVRKAAGFD 175 (499)
T ss_dssp EEEEEEEEEEECCCTT-----CHHHHHTTCC
T ss_pred cEEEEeCEEEEccCcc-----cHHHHHcCCC
Confidence 2579999999999954 4556555443
No 28
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.50 E-value=1.4e-13 Score=127.08 Aligned_cols=135 Identities=17% Similarity=0.170 Sum_probs=88.5
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCC-CccccCcccch------------------------hh---
Q 020815 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPG-GGAWLGGQLFS------------------------AM--- 140 (321)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~g-g~~~~~g~~~~------------------------~~--- 140 (321)
.++||+|||||++|+++|++|+ + |.+|+|||+++.+| +.++..+..+. .+
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~-G~~V~vlE~~~~~g~~as~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 85 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-A-HGRVVVLEREAQPGYHSTGRSAAHYTVAYGTPQVRALTAASRAFFDNPPAGFCEH 85 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-T-TSCEEEECSSSSTTSSGGGSCCCEECSSSSCHHHHHHHHHHHHHHHSCCTTSCSS
T ss_pred CcCCEEEECCcHHHHHHHHHHh-C-CCCEEEEECCCCccccccccccceeecccCCHHHHHHHHHHHHHHHHhhhhhCCc
Confidence 3689999999999999999999 7 99999999986565 33322111100 00
Q ss_pred --hc---------cc------hHHHHHHHcCCCcccC------------------CCeE----EEecHHHHHHHHHHHHH
Q 020815 141 --VV---------RK------PAHIFLDELGIDYDEQ------------------DNYV----VIKHAALFTSTIMSKLL 181 (321)
Q Consensus 141 --~~---------~~------~~~~~l~~~g~~~~~~------------------~~~~----~~~~~~~~~~~l~~~~~ 181 (321)
.. .. ...+++...|+++... ..+. ...+...+...|.+.+.
T Consensus 86 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~ 165 (381)
T 3nyc_A 86 PLLSPRPEMVVDFSDDPEELRRQYESGKALVPQMRLLDAEQACSIVPVLRRDKVFGATYDPTGADIDTDALHQGYLRGIR 165 (381)
T ss_dssp CSEEECCEEEECSSCCHHHHHHHHHHHHHHCTTCEEECHHHHHHHSTTBCGGGCCCEEEETTCEEECHHHHHHHHHHHHH
T ss_pred ccccccceEEEechHHHHHHHHHHHHHHHcCCCcEEeCHHHHHHhCCCcccccceEEEEcCCCceECHHHHHHHHHHHHH
Confidence 00 00 1122333444432110 0000 12356788888888887
Q ss_pred cCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 182 ARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 182 ~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
+.|++++++++|++|..+++. ++|.+. ..+++||.||+|+|.++
T Consensus 166 -~~Gv~i~~~~~V~~i~~~~~~-~~V~t~---------------~g~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 166 -RNQGQVLCNHEALEIRRVDGA-WEVRCD---------------AGSYRAAVLVNAAGAWC 209 (381)
T ss_dssp -HTTCEEESSCCCCEEEEETTE-EEEECS---------------SEEEEESEEEECCGGGH
T ss_pred -HCCCEEEcCCEEEEEEEeCCe-EEEEeC---------------CCEEEcCEEEECCChhH
Confidence 579999999999999988876 445542 14799999999999543
No 29
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.49 E-value=9.2e-14 Score=134.60 Aligned_cols=149 Identities=17% Similarity=0.234 Sum_probs=100.7
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCC---------------------------ccccCcccchhhh-
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGG---------------------------GAWLGGQLFSAMV- 141 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg---------------------------~~~~~g~~~~~~~- 141 (321)
++||||||||++|+++|+.|++. |++|+|||++..+++ +.|..+.+.....
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~-G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~ 185 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQM-GFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKD 185 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHT-TCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEecc
Confidence 58999999999999999999999 999999999864421 1111111111111
Q ss_pred ---ccchHHHHHHHcCCCcccCCCe-E--EEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeeccee
Q 020815 142 ---VRKPAHIFLDELGIDYDEQDNY-V--VIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVS 215 (321)
Q Consensus 142 ---~~~~~~~~l~~~g~~~~~~~~~-~--~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~ 215 (321)
......+++.++|.+....... . -......+...|.+.+. +.|++++++++|+++..+++++.+|.+.+
T Consensus 186 ~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~-~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~---- 260 (549)
T 3nlc_A 186 PNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATII-ELGGEIRFSTRVDDLHMEDGQITGVTLSN---- 260 (549)
T ss_dssp TTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHH-HTTCEEESSCCEEEEEESSSBEEEEEETT----
T ss_pred ccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHH-hcCCEEEeCCEEEEEEEeCCEEEEEEECC----
Confidence 1123456777788764332111 1 11233567777788776 46999999999999999888888888743
Q ss_pred cccCCCCCCCceEEEcCeEEEcCCCCCCCcchhhhhhhhcCC
Q 020815 216 MNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGM 257 (321)
Q Consensus 216 ~~~~~~~~g~~~~i~a~~VI~AtG~~~~~~~~~~~~~~~~g~ 257 (321)
+.+++||.||+|+|+.+. .+.+.+...++
T Consensus 261 ----------G~~i~Ad~VVlA~G~~s~---~~~~~l~~~Gi 289 (549)
T 3nlc_A 261 ----------GEEIKSRHVVLAVGHSAR---DTFEMLHERGV 289 (549)
T ss_dssp ----------SCEEECSCEEECCCTTCH---HHHHHHHHTTC
T ss_pred ----------CCEEECCEEEECCCCChh---hHHHHHHHcCC
Confidence 257999999999997653 23344444443
No 30
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.48 E-value=8.1e-13 Score=123.91 Aligned_cols=137 Identities=20% Similarity=0.225 Sum_probs=87.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCC---CccccCcccchhhhccchHHHHHHHcCCCccc-------
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPG---GGAWLGGQLFSAMVVRKPAHIFLDELGIDYDE------- 159 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~g---g~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~------- 159 (321)
++||+|||||++|+++|+.|++. |++|+|||+...+. |.+....+. ..+......+.+.+.++....
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~-G~~V~v~E~~~~~~~~~g~~~~~~~~--~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 81 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKS-GFKVKIVEKQKFPRFVIGESLLPRCM--EHLDEAGFLDAVKAQGFQQKFGAKFVRG 81 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT-TCCEEEECSSCSSCCCSCCBCCGGGH--HHHHHTTCHHHHHHTTCEEECEEEEEET
T ss_pred cCcEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCCCCCCcccCcccHhHH--HHHHHcCChHHHHHcCCcccCCcEEEeC
Confidence 58999999999999999999999 99999999986432 111110000 000000111222222221110
Q ss_pred --------------CCCeEEEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEE-EEEEeecceecccCCCCCC
Q 020815 160 --------------QDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVG-GVVTNWALVSMNHDTQSCM 224 (321)
Q Consensus 160 --------------~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~-gv~~~~~~~~~~~~~~~~g 224 (321)
...+....+...+.+.|.+.+. +.|++++++++|+++..+++.+. .+.+. +|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~-~~gv~i~~~~~v~~i~~~~~~~~v~v~~~------------~g 148 (421)
T 3nix_A 82 KEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAA-RQGVDVEYEVGVTDIKFFGTDSVTTIEDI------------NG 148 (421)
T ss_dssp TEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHH-HHTCEEECSEEEEEEEEETTEEEEEEEET------------TS
T ss_pred CeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHH-hCCCEEEcCCEEEEEEEeCCEEEEEEEcC------------CC
Confidence 0122334566788888888887 46999999999999998876543 23321 12
Q ss_pred CceEEEcCeEEEcCCCCC
Q 020815 225 DPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 225 ~~~~i~a~~VI~AtG~~~ 242 (321)
+..+++||.||+|+|..+
T Consensus 149 ~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 149 NKREIEARFIIDASGYGR 166 (421)
T ss_dssp CEEEEEEEEEEECCGGGC
T ss_pred CEEEEEcCEEEECCCCch
Confidence 334799999999999544
No 31
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.47 E-value=4.6e-13 Score=123.96 Aligned_cols=136 Identities=18% Similarity=0.280 Sum_probs=90.2
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccch--------------------hh-------h-
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFS--------------------AM-------V- 141 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~--------------------~~-------~- 141 (321)
++||+|||||++|+++|++|++. |.+|+|||+....++.+...+.... .+ +
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~-G~~V~lle~~~~~~gas~~~~g~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~ 83 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKR-GEEVTVIEKRFIGSGSTFRCGTGIRQQFNDEANVRVMKRSVELWKKYSEEYGFSFK 83 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSTTCSHHHHCCCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCCCCccccccCeeeecCCChHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 68999999999999999999999 9999999998543333222111100 00 0
Q ss_pred -------c-cc-------hHHHHHHHcCCCcccC--------------CCe--EE------EecHHHHHHHHHHHHHcCC
Q 020815 142 -------V-RK-------PAHIFLDELGIDYDEQ--------------DNY--VV------IKHAALFTSTIMSKLLARP 184 (321)
Q Consensus 142 -------~-~~-------~~~~~l~~~g~~~~~~--------------~~~--~~------~~~~~~~~~~l~~~~~~~~ 184 (321)
. .. ...+++.++|+++... ..+ .. ..+...+...|.+.+. +.
T Consensus 84 ~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~ 162 (382)
T 1y56_B 84 QTGYLFLLYDDEEVKTFKRNIEIQNKFGVPTKLITPEEAKEIVPLLDISEVIAASWNPTDGKADPFEATTAFAVKAK-EY 162 (382)
T ss_dssp CCCEEEEECSHHHHHHHHHHHHHHHHTTCCCEEECHHHHHHSSTTCCCTTCCEEEEETTCCEECHHHHHHHHHHHHH-HT
T ss_pred ccceEEEEeCHHHHHHHHHHHHHHHhcCCCcEEeCHHHHHHhCCCCCcccceEEEEcCCCeeECHHHHHHHHHHHHH-HC
Confidence 0 00 0112233445432210 000 00 2345778888888886 57
Q ss_pred CcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 185 NVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 185 gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
|++++++++|+++..+++++.+|.+.+ .+++||.||+|+|.++
T Consensus 163 Gv~i~~~~~v~~i~~~~~~v~gv~~~~---------------g~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 163 GAKLLEYTEVKGFLIENNEIKGVKTNK---------------GIIKTGIVVNATNAWA 205 (382)
T ss_dssp TCEEECSCCEEEEEESSSBEEEEEETT---------------EEEECSEEEECCGGGH
T ss_pred CCEEECCceEEEEEEECCEEEEEEECC---------------cEEECCEEEECcchhH
Confidence 999999999999998888888777632 3799999999999543
No 32
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.47 E-value=5.8e-13 Score=132.79 Aligned_cols=137 Identities=15% Similarity=0.198 Sum_probs=89.1
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCC-CccccC-cccchhhhcc------------chHHHHHHHc--
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPG-GGAWLG-GQLFSAMVVR------------KPAHIFLDEL-- 153 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~g-g~~~~~-g~~~~~~~~~------------~~~~~~l~~~-- 153 (321)
.+||||||||++|+++|+.|++. |++|+|||++..+| |.++.. |.+....... ....++++++
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~-G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 350 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRR-GWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPV 350 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSSSSCSTTCCSCEEECCCCCSSCHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCcccccCccCCCceecCcCCCCccHHHHHHHHHHHHHHHHHHHCCC
Confidence 48999999999999999999999 99999999976555 333322 2211100000 0111222222
Q ss_pred ----------------------------CCCcc---c--------------C-CCe----EEEecHHHHHHHHHHHHHcC
Q 020815 154 ----------------------------GIDYD---E--------------Q-DNY----VVIKHAALFTSTIMSKLLAR 183 (321)
Q Consensus 154 ----------------------------g~~~~---~--------------~-~~~----~~~~~~~~~~~~l~~~~~~~ 183 (321)
+++.. . . ... ....+...+...|.+.+. +
T Consensus 351 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL~~~a~-~ 429 (676)
T 3ps9_A 351 KFDHDWCGVTQLGWDEKSQHKIAQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLELAQ-Q 429 (676)
T ss_dssp CCCEECCCEEEECCSHHHHHHHHHHHTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHHHHHHHHH-H
T ss_pred CcCcCcCCeeeecCCHHHHHHHHHHHhcCCcHHHhhhCCHHHHHHhhCCCccCCcEEecCCeeeCHHHHHHHHHHHHH-h
Confidence 22211 0 0 000 012245678888888887 5
Q ss_pred CCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCC
Q 020815 184 PNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (321)
Q Consensus 184 ~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~ 243 (321)
.|++++++++|++|..+++++ .|.+. ++.+++||.||+|+|+++.
T Consensus 430 ~Gv~i~~~t~V~~l~~~~~~v-~V~t~--------------~G~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 430 QGLQIYYQYQLQNFSRKDDCW-LLNFA--------------GDQQATHSVVVLANGHQIS 474 (676)
T ss_dssp TTCEEEESCCEEEEEEETTEE-EEEET--------------TSCEEEESEEEECCGGGGG
T ss_pred CCCEEEeCCeeeEEEEeCCeE-EEEEC--------------CCCEEECCEEEECCCcchh
Confidence 799999999999999998874 45542 1257999999999997753
No 33
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.46 E-value=6.8e-13 Score=125.27 Aligned_cols=137 Identities=18% Similarity=0.175 Sum_probs=91.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeccCCCCCccccCc-----------ccch------hh-----------
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSVSPGGGAWLGG-----------QLFS------AM----------- 140 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~~~~gg~~~~~g-----------~~~~------~~----------- 140 (321)
++||||||||++|+++|++|++. |. +|+|||+....++.....+ ..+. .+
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~-G~~~V~vlE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 84 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARR-GYTNVTVLDPYPVPSAISAGNDVNKVISSGQYSNNKDEIEVNEILAEEAFNGWKND 84 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHT-TCCCEEEEESSCSSCTTCTTCSSCEEECCCCSCCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCEEEECCCHHHHHHHHHHHHc-CCCcEEEEeCCCCCCCCccCCCCccEEEeccCCchhhhcchhHHHHHHHHHHHhhC
Confidence 68999999999999999999999 99 9999999876654321100 0000 00
Q ss_pred ------hc---------cchHHHHHHH-----cCCCcc-------------c------C-C--CeE-----EEecHHHHH
Q 020815 141 ------VV---------RKPAHIFLDE-----LGIDYD-------------E------Q-D--NYV-----VIKHAALFT 173 (321)
Q Consensus 141 ------~~---------~~~~~~~l~~-----~g~~~~-------------~------~-~--~~~-----~~~~~~~~~ 173 (321)
+. .....+.+.. .+..+. . . . .++ ...+...+.
T Consensus 85 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~l~~~~~~g~~g~~~~~~~g~~~~~~~~ 164 (438)
T 3dje_A 85 PLFKPYYHDTGLLMSACSQEGLDRLGVRVRPGEDPNLVELTRPEQFRKLAPEGVLQGDFPGWKGYFARSGAGWAHARNAL 164 (438)
T ss_dssp TTTGGGEECCCEEEEECSHHHHHHHHHHHCGGGCTTCEEECSHHHHHTTSCTTTSCSCCTTCEEEEESSSCEEECHHHHH
T ss_pred ccccCcEeccceEEEecCcchHHHHHHHHhhcccCCceecCCHHHHHHhCCcccccCCCCCceEEEeCCCCEEecHHHHH
Confidence 00 0011111111 122210 0 0 0 111 122456788
Q ss_pred HHHHHHHHcCCCcEEEcCc---eEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 174 STIMSKLLARPNVKLFNAV---AAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 174 ~~l~~~~~~~~gv~i~~~~---~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
..|.+.+. +.|++|++++ +|++|..+++++.+|.+.+ +.+++||.||+|+|+++
T Consensus 165 ~~L~~~a~-~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~--------------G~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 165 VAAAREAQ-RMGVKFVTGTPQGRVVTLIFENNDVKGAVTAD--------------GKIWRAERTFLCAGASA 221 (438)
T ss_dssp HHHHHHHH-HTTCEEEESTTTTCEEEEEEETTEEEEEEETT--------------TEEEECSEEEECCGGGG
T ss_pred HHHHHHHH-hcCCEEEeCCcCceEEEEEecCCeEEEEEECC--------------CCEEECCEEEECCCCCh
Confidence 88888887 5799999999 9999999999999898843 25899999999999765
No 34
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.46 E-value=3.3e-13 Score=131.64 Aligned_cols=142 Identities=23% Similarity=0.277 Sum_probs=91.2
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccc-------hh---hhccc--------------
Q 020815 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLF-------SA---MVVRK-------------- 144 (321)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~-------~~---~~~~~-------------- 144 (321)
.+|||||||||++|+++|+.|+++ |++|+|||+++..+|++.....+. .. .+...
T Consensus 17 ~~~DVvVIGgGi~Gl~~A~~La~~-G~~V~LlEk~d~~~GtS~~ss~lihgG~ryl~~~~~~l~~e~~~e~~~l~~~ap~ 95 (561)
T 3da1_A 17 KQLDLLVIGGGITGAGIALDAQVR-GIQTGLVEMNDFASGTSSRSTKLVHGGLRYLKQFEIKLVAEVGKERAIVYENAPH 95 (561)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHTT-TCCEEEEESSSTTCSGGGSSCCEECC---------------CHHHHHHHHHHCTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCcEEEEECCCCCCCcccCCcCccccchHHHHhcCHHHHHHHHHHHHHHHHhCch
Confidence 469999999999999999999999 999999999976666543222110 00 00000
Q ss_pred ---------------hHHHHHHHcCCC----------------------------cccC---CCeE---EEecHHHHHHH
Q 020815 145 ---------------PAHIFLDELGID----------------------------YDEQ---DNYV---VIKHAALFTST 175 (321)
Q Consensus 145 ---------------~~~~~l~~~g~~----------------------------~~~~---~~~~---~~~~~~~~~~~ 175 (321)
....+....+.. +... ..+. ...+...+...
T Consensus 96 l~~~~~~~~p~~~~~~~~~~~~~~g~~~~d~l~~~~~~~~~~~l~~~~~~~~~P~l~~~~~~gg~~~~dg~vd~~~l~~~ 175 (561)
T 3da1_A 96 VTTPEWMLLPIFKDGTFGKFSTSLGLKVYDYLADVRKDERRYMLNEKQTLEKEPLLRKENLKGGGIYVEYRTDDARLTLE 175 (561)
T ss_dssp TCEEEEEEEEECC---------------------------CEEECHHHHHHHCTTSCCTTCCEEEEEEEEECCHHHHHHH
T ss_pred hccccceeEeecCCccHHHHHHHhHHHHHHHhhcccCCCCcEEECHHHHHHhCccCChhhceeEEEecCceEcHHHHHHH
Confidence 000000000000 0000 0000 12345677778
Q ss_pred HHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 176 IMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 176 l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
|.+.+. +.|++++++++|+++..+++++.+|.+.+. .+++..+++||.||+|+|.+
T Consensus 176 L~~~a~-~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~---------~tg~~~~i~A~~VV~AaG~~ 231 (561)
T 3da1_A 176 IMKEAV-ARGAVALNYMKVESFIYDQGKVVGVVAKDR---------LTDTTHTIYAKKVVNAAGPW 231 (561)
T ss_dssp HHHHHH-HTTCEEEESEEEEEEEEETTEEEEEEEEET---------TTCCEEEEEEEEEEECCGGG
T ss_pred HHHHHH-HcCCEEEcCCEEEEEEEcCCeEEEEEEEEc---------CCCceEEEECCEEEECCCcc
Confidence 888776 579999999999999999999999988541 12244789999999999944
No 35
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.46 E-value=5.8e-13 Score=124.22 Aligned_cols=131 Identities=18% Similarity=0.284 Sum_probs=86.4
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCC---------Ccc--
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGI---------DYD-- 158 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~---------~~~-- 158 (321)
++||+|||||++|+++|+.|++. |++|+|||+...+... ..+.. ......+.++++|+ ++.
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~-G~~V~viE~~~~~~~~--~~~~~-----l~~~~~~~l~~~g~~~~~~~~~~~~~~~ 77 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQ-GHRVVVVEQARRERAI--NGADL-----LKPAGIRVVEAAGLLAEVTRRGGRVRHE 77 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCCC-----CCCCE-----ECHHHHHHHHHTTCHHHHHHTTCEEECE
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-CCcEEEEeCCCCCCcc--Cceee-----ECchHHHHHHHcCcHHHHHHhCCCccee
Confidence 58999999999999999999999 9999999998654211 01111 11112222333222 110
Q ss_pred ----cC--------------CCeEEEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEE-EEEEeecceecccC
Q 020815 159 ----EQ--------------DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVG-GVVTNWALVSMNHD 219 (321)
Q Consensus 159 ----~~--------------~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~-gv~~~~~~~~~~~~ 219 (321)
.. ..+....+...+.+.|.+.+.+..|++++++++|+++..+++.+. .|.+.+
T Consensus 78 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~-------- 149 (399)
T 2x3n_A 78 LEVYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLND-------- 149 (399)
T ss_dssp EEEEETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETT--------
T ss_pred EEEeCCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECC--------
Confidence 00 011233456788888888886434999999999999988777653 344421
Q ss_pred CCCCCCceEEEcCeEEEcCCCCC
Q 020815 220 TQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 220 ~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
+.+++||.||+|+|..+
T Consensus 150 ------g~~~~ad~vV~AdG~~s 166 (399)
T 2x3n_A 150 ------GRVLRPRVVVGADGIAS 166 (399)
T ss_dssp ------SCEEEEEEEEECCCTTC
T ss_pred ------CCEEECCEEEECCCCCh
Confidence 24799999999999554
No 36
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.45 E-value=8.8e-13 Score=127.92 Aligned_cols=132 Identities=15% Similarity=0.109 Sum_probs=86.8
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCC---------CcccC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGI---------DYDEQ 160 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~---------~~~~~ 160 (321)
++||+|||||++|+++|+.|++. |++|+||||...++.... +. .......+.++++|+ ++...
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~-G~~v~viEr~~~~~~~~~-~~------~l~~~~~~~l~~lGl~~~~~~~~~~~~~~ 76 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQ-GVRVLVVERRPGLSPYPR-AA------GQNPRTMELLRIGGVADEVVRADDIRGTQ 76 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTT-TCCEEEECSSSSCCCCCC-SC------CBCHHHHHHHHHTTCHHHHHHSCCSSCTT
T ss_pred cCcEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCCCCCCCCc-cc------eECHHHHHHHHHcCCHHHHHhhCCCcccc
Confidence 68999999999999999999999 999999999875532111 10 111222233333322 21110
Q ss_pred ----------------------------------CCeEEEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECC----
Q 020815 161 ----------------------------------DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG---- 202 (321)
Q Consensus 161 ----------------------------------~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~---- 202 (321)
.......+...+...|.+.+.+ .|++++++++|+++..+++
T Consensus 77 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~-~gv~i~~~~~v~~i~~~~~~~~~ 155 (535)
T 3ihg_A 77 GDFVIRLAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARK-HGGAIRFGTRLLSFRQHDDDAGA 155 (535)
T ss_dssp SCCEEEEESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHH-TTCEEESSCEEEEEEEECGGGCS
T ss_pred cceeeeEEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHh-CCCEEEeCCEEEEEEECCCCccc
Confidence 0001123456777888888874 5999999999999998876
Q ss_pred EEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 203 RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 203 ~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
.+... +.++ + ...+++||+||.|+|.++
T Consensus 156 ~v~v~-~~~~----------~-~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 156 GVTAR-LAGP----------D-GEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp EEEEE-EEET----------T-EEEEEEEEEEEECCCTTC
T ss_pred cEEEE-EEcC----------C-CeEEEEeCEEEECCCCcc
Confidence 55432 2210 0 136899999999999554
No 37
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.45 E-value=8.5e-13 Score=123.46 Aligned_cols=131 Identities=15% Similarity=0.134 Sum_probs=86.5
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCC---------Ccc-
Q 020815 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGI---------DYD- 158 (321)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~---------~~~- 158 (321)
..+||+|||||++|+++|+.|++. |++|+|||+...+.... .+ ........+.++++|+ +..
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~-G~~V~v~E~~~~~~~~~--~~-----~~l~~~~~~~l~~lg~~~~~~~~~~~~~~ 93 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQS-GIDCDVYEAVKEIKPVG--AA-----ISVWPNGVKCMAHLGMGDIMETFGGPLRR 93 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSCC------CE-----EEECHHHHHHHHHTTCHHHHHHHSCCCCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCCCCCCcC--ee-----EEECHHHHHHHHHCCCHHHHHhhcCCCcc
Confidence 368999999999999999999999 99999999987553211 01 1111222333444333 111
Q ss_pred -----cC-C----------------CeEEEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceec
Q 020815 159 -----EQ-D----------------NYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSM 216 (321)
Q Consensus 159 -----~~-~----------------~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~ 216 (321)
.. + ......+...+.+.|++.+.+ ++++++++|+++..+++.+. |.+.
T Consensus 94 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~---~~i~~~~~v~~i~~~~~~v~-v~~~------ 163 (407)
T 3rp8_A 94 MAYRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR---DSVQFGKRVTRCEEDADGVT-VWFT------ 163 (407)
T ss_dssp EEEEETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG---GGEEESCCEEEEEEETTEEE-EEET------
T ss_pred eEEEECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc---CEEEECCEEEEEEecCCcEE-EEEc------
Confidence 00 0 112233456777888887753 89999999999999888544 3332
Q ss_pred ccCCCCCCCceEEEcCeEEEcCCCCCCCc
Q 020815 217 NHDTQSCMDPNVMEAKVVVSSCGHDGPFG 245 (321)
Q Consensus 217 ~~~~~~~g~~~~i~a~~VI~AtG~~~~~~ 245 (321)
++.+++||+||.|+|..+.+.
T Consensus 164 --------~g~~~~a~~vV~AdG~~S~vr 184 (407)
T 3rp8_A 164 --------DGSSASGDLLIAADGSHSALR 184 (407)
T ss_dssp --------TSCEEEESEEEECCCTTCSSH
T ss_pred --------CCCEEeeCEEEECCCcChHHH
Confidence 225899999999999776543
No 38
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.44 E-value=9.9e-13 Score=128.86 Aligned_cols=132 Identities=17% Similarity=0.235 Sum_probs=90.4
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCC---------Ccc--
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGI---------DYD-- 158 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~---------~~~-- 158 (321)
++||+|||||++|+++|+.|++. |++|+|||+...++... +..+ .......++.+|+ ...
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~-G~~V~LiEr~~~~~~~~--G~~l------~p~~~~~l~~lGl~~~l~~~~~~~~~~ 93 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKL-GHDVTIYERSAFPRYRV--GESL------LPGTMSILNRLGLQEKIDAQNYVKKPS 93 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCSSCCCC--CCBC------CHHHHHHHHHTTCHHHHHHHCCEEECE
T ss_pred CCCEEEECcCHHHHHHHHHHHcC-CCCEEEEcCCCCCCCce--eeeE------CHHHHHHHHHcCCcHHHHhcCCcccCC
Confidence 68999999999999999999999 99999999986543321 1111 1112223333332 100
Q ss_pred ------c-----------------CCCeEEEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeeccee
Q 020815 159 ------E-----------------QDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVS 215 (321)
Q Consensus 159 ------~-----------------~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~ 215 (321)
. ...+....+...+...|.+.+. +.|++++++++|+++..+++.+.+|.+..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~-~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~---- 168 (591)
T 3i3l_A 94 ATFLWGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEAR-SRGITVHEETPVTDVDLSDPDRVVLTVRR---- 168 (591)
T ss_dssp EEEECSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHH-HTTCEEETTCCEEEEECCSTTCEEEEEEE----
T ss_pred cEEEecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHH-hCCCEEEeCCEEEEEEEcCCCEEEEEEec----
Confidence 0 0012234456778888888887 47999999999999988766677777642
Q ss_pred cccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 216 MNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 216 ~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
+|+..+++||.||+|+|..+
T Consensus 169 -------~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 169 -------GGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp -------TTEEEEEEESEEEECCGGGC
T ss_pred -------CCceEEEEcCEEEECCCCcc
Confidence 11236899999999999544
No 39
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.43 E-value=1.3e-12 Score=127.44 Aligned_cols=137 Identities=23% Similarity=0.276 Sum_probs=89.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC-CCCC-ccccC-cccchhhhcc------chHHHHHHHcCCCcccC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV-SPGG-GAWLG-GQLFSAMVVR------KPAHIFLDELGIDYDEQ 160 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~-~~gg-~~~~~-g~~~~~~~~~------~~~~~~l~~~g~~~~~~ 160 (321)
+|||||||||++|+.||++|++. |++|+|||++. .+|. +|... +......+.. .....+++..++.|...
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~-G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l 105 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARM-GAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKML 105 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeec
Confidence 58999999999999999999999 99999999974 3332 12110 1110000000 00112233333433211
Q ss_pred --------CCeEEEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcC
Q 020815 161 --------DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAK 232 (321)
Q Consensus 161 --------~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~ 232 (321)
.......+...+...|.+.+.+..|++++ +.+|++|..+++++.+|.+.+ +.+++||
T Consensus 106 ~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~g~V~GV~t~d--------------G~~i~Ad 170 (637)
T 2zxi_A 106 NTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVKNNQVVGVRTNL--------------GVEYKTK 170 (637)
T ss_dssp STTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEESSSBEEEEEETT--------------SCEEECS
T ss_pred ccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEecCCEEEEEEECC--------------CcEEEeC
Confidence 01112334567778888877744799996 569999998889999998743 2689999
Q ss_pred eEEEcCCCCC
Q 020815 233 VVVSSCGHDG 242 (321)
Q Consensus 233 ~VI~AtG~~~ 242 (321)
.||+|||++.
T Consensus 171 aVVLATG~~s 180 (637)
T 2zxi_A 171 AVVVTTGTFL 180 (637)
T ss_dssp EEEECCTTCB
T ss_pred EEEEccCCCc
Confidence 9999999864
No 40
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.43 E-value=7.4e-13 Score=123.38 Aligned_cols=136 Identities=20% Similarity=0.228 Sum_probs=88.9
Q ss_pred cccEEEECCChHHHHHHHHhhc-CCC-CeEEEEeccCCCCCccccCcccchhhhcc------------------------
Q 020815 90 DTDVVVVGAGSAGLSCAYELSK-NPN-IQIAIIEQSVSPGGGAWLGGQLFSAMVVR------------------------ 143 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~-~~G-~~V~liEk~~~~gg~~~~~g~~~~~~~~~------------------------ 143 (321)
++||+|||||++|+++|++|++ . | .+|+|||++...+|.+.............
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~~-G~~~V~vlE~~~~~~gas~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 99 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKNH-GITNVAVLEKGWLAGGNMARNTTIIRSNYLWDESAGIYEKSLKLWEQLPEDLEYD 99 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHH-CCCCEEEECSSSTTCSGGGTSCCCBCCCCSSHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCEEEECcCHHHHHHHHHHHHhc-CCCcEEEEeCCCCCCCcccccCceeeecCCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 6899999999999999999999 9 9 99999999875444433222111000000
Q ss_pred --------------c-------hHHHHHHHcCCCcccC---------C----------C--eEE------EecHHHHHHH
Q 020815 144 --------------K-------PAHIFLDELGIDYDEQ---------D----------N--YVV------IKHAALFTST 175 (321)
Q Consensus 144 --------------~-------~~~~~l~~~g~~~~~~---------~----------~--~~~------~~~~~~~~~~ 175 (321)
. ...+++.+.|+++... . . ... ..+...+.+.
T Consensus 100 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (405)
T 2gag_B 100 FLFSQRGVLNLAHTLGDVRESVRRVEANKLNGVDAEWLDPSQVKEACPIINTSDDIRYPVMGATWQPRAGIAKHDHVAWA 179 (405)
T ss_dssp CCCBCCCEEEEECSHHHHHHHHHHHHHHHTBTCCCEEECHHHHHHHCTTSCCSTTSSSCCCEEEEETTCBBCCHHHHHHH
T ss_pred cCEecccEEEEEcCHHHHHHHHHHHHHHHhcCCCceEeCHHHHHhhCCCCcccccccccceeEEEeCCCccCCHHHHHHH
Confidence 0 0112223334332110 0 0 000 1234567788
Q ss_pred HHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 176 IMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 176 l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
|.+.+. +.|++++++++|+++..+++++.+|.+.+ .+++||.||+|+|+++
T Consensus 180 l~~~~~-~~g~~i~~~~~v~~i~~~~~~~~~v~~~~---------------g~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 180 FARKAN-EMGVDIIQNCEVTGFIKDGEKVTGVKTTR---------------GTIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHH-HTTCEEECSCCEEEEEESSSBEEEEEETT---------------CCEEEEEEEECCGGGH
T ss_pred HHHHHH-HCCCEEEcCCeEEEEEEeCCEEEEEEeCC---------------ceEECCEEEECCchhH
Confidence 888886 57999999999999998888777777632 2689999999999543
No 41
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.43 E-value=6.6e-13 Score=129.67 Aligned_cols=141 Identities=22% Similarity=0.222 Sum_probs=90.6
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCC-------------
Q 020815 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGI------------- 155 (321)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~------------- 155 (321)
.+|||+|||||++|+++|+.|++. |++|+|||+...+..... + ........+.++++|+
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~-G~~V~VlEr~~~~~~~~r-~------~~l~~~s~~~l~~lGl~~~l~~~~~~~~~ 119 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAG-GVGALVLEKLVEPVGHDR-A------GALHIRTVETLDLRGLLDRFLEGTQVAKG 119 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHT-TCCEEEEBSCSSCCCSSS-C------CCBCHHHHHHHHTTTCHHHHTTSCCBCSB
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEcCCCCCCCCce-E------EEECHHHHHHHHHcCChHHHHhcCcccCC
Confidence 368999999999999999999999 999999999865532111 1 1111222333333332
Q ss_pred -----------CcccC---CCeEEEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCC
Q 020815 156 -----------DYDEQ---DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQ 221 (321)
Q Consensus 156 -----------~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~ 221 (321)
.+... ..+....+...+.+.|.+.+. +.|++|+++++|+++..+++.+. |.+..
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~-~~gv~i~~~~~v~~l~~~~~~v~-v~~~~---------- 187 (570)
T 3fmw_A 120 LPFAGIFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAR-EAGAEIPRGHEVTRLRQDAEAVE-VTVAG---------- 187 (570)
T ss_dssp CCBTTBCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHH-HHTEECCBSCEEEECCBCSSCEE-EEEEE----------
T ss_pred ceeCCcccccccccccCCCCCeeEEeCHHHHHHHHHHHHH-hCCCEEEeCCEEEEEEEcCCeEE-EEEEe----------
Confidence 01100 112233456778888888876 46999999999999988776554 33311
Q ss_pred CCCCc-eEEEcCeEEEcCCCCCCCcchhhhhhhhcC
Q 020815 222 SCMDP-NVMEAKVVVSSCGHDGPFGATGVKRLKSIG 256 (321)
Q Consensus 222 ~~g~~-~~i~a~~VI~AtG~~~~~~~~~~~~~~~~g 256 (321)
. ++ .+++||+||.|+|.. +.+++...++
T Consensus 188 ~--~G~~~~~a~~vV~ADG~~-----S~vR~~lGi~ 216 (570)
T 3fmw_A 188 P--SGPYPVRARYGVGCDGGR-----STVRRLAADR 216 (570)
T ss_dssp T--TEEEEEEESEEEECSCSS-----CHHHHHTTCC
T ss_pred C--CCcEEEEeCEEEEcCCCC-----chHHHHcCCC
Confidence 0 22 589999999999954 4555555443
No 42
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.42 E-value=1.7e-12 Score=120.27 Aligned_cols=126 Identities=20% Similarity=0.173 Sum_probs=85.7
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCC---------ccc-
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGID---------YDE- 159 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~---------~~~- 159 (321)
.+||+|||||++|+++|+.|++. |++|+|||+...++... .+. .......+.++++|+. ...
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~-G~~v~viE~~~~~~~~~--~~~-----~l~~~~~~~l~~~g~~~~~~~~~~~~~~~ 82 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQN-GWDVRLHEKSSELRAFG--AGI-----YLWHNGLRVLEGLGALDDVLQGSHTPPTY 82 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSCCCCS--SEE-----EEEHHHHHHHHHTTCHHHHHTTCBCCSCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCCEEEEecCCCCCCCC--ceE-----EeCccHHHHHHHcCCHHHHHhhCCCccce
Confidence 58999999999999999999999 99999999987664321 111 1112233344444331 100
Q ss_pred ----C----------CCeEEEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCC
Q 020815 160 ----Q----------DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMD 225 (321)
Q Consensus 160 ----~----------~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~ 225 (321)
. .......+...+.+.|.+.+.+ .|++++++++|+++.. ++ .|.+.+
T Consensus 83 ~~~~~g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~-~gv~i~~~~~v~~i~~-~~---~v~~~~-------------- 143 (379)
T 3alj_A 83 ETWMHNKSVSKETFNGLPWRIMTRSHLHDALVNRARA-LGVDISVNSEAVAADP-VG---RLTLQT-------------- 143 (379)
T ss_dssp EEEETTEEEEEECGGGCCEEEEEHHHHHHHHHHHHHH-TTCEEESSCCEEEEET-TT---EEEETT--------------
T ss_pred EEEeCCceeeeccCCCCceEEECHHHHHHHHHHHHHh-cCCEEEeCCEEEEEEe-CC---EEEECC--------------
Confidence 0 0112334567788888888874 6999999999999976 44 344421
Q ss_pred ceEEEcCeEEEcCCCCC
Q 020815 226 PNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 226 ~~~i~a~~VI~AtG~~~ 242 (321)
+.+++||+||+|+|..+
T Consensus 144 g~~~~ad~vV~AdG~~s 160 (379)
T 3alj_A 144 GEVLEADLIVGADGVGS 160 (379)
T ss_dssp SCEEECSEEEECCCTTC
T ss_pred CCEEEcCEEEECCCccH
Confidence 25799999999999554
No 43
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.41 E-value=5e-13 Score=124.38 Aligned_cols=136 Identities=20% Similarity=0.157 Sum_probs=86.9
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCC-ccccCcccchhhhccchHHHHHHHcCCCcc----------
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGG-GAWLGGQLFSAMVVRKPAHIFLDELGIDYD---------- 158 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg-~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~---------- 158 (321)
++||+|||||++|+++|+.|++. |++|+|||+...+.+ .....+. ......+.++++|+.-.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~-G~~v~v~E~~~~~~~~~~~~~g~------l~~~~~~~l~~lg~~~~~~~~~~~~~~ 74 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKA-GIDNVILERQTPDYVLGRIRAGV------LEQGMVDLLREAGVDRRMARDGLVHEG 74 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHH-TCCEEEECSSCHHHHHTCCCCCE------ECHHHHHHHHHTTCCHHHHHHCEEESC
T ss_pred CccEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCCCcccCCCceEe------ECHHHHHHHHHcCCcHHHHhcCCccce
Confidence 58999999999999999999999 999999999763210 0000111 12233344555544210
Q ss_pred ----cC-------------CCeEEEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEE-eecceecccCC
Q 020815 159 ----EQ-------------DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVT-NWALVSMNHDT 220 (321)
Q Consensus 159 ----~~-------------~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~-~~~~~~~~~~~ 220 (321)
.. .......+...+.+.|++.+. +.|++++++++|+++..+++....|.+ .+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~--------- 144 (394)
T 1k0i_A 75 VEIAFAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEARE-ACGATTVYQAAEVRLHDLQGERPYVTFERD--------- 144 (394)
T ss_dssp EEEEETTEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHH-HTTCEEESSCEEEEEECTTSSSCEEEEEET---------
T ss_pred EEEEECCceEEeccccccCCCceEEechHHHHHHHHHHHH-hcCCeEEeceeEEEEEEecCCceEEEEecC---------
Confidence 00 111122244567778888877 469999999999999875432223443 21
Q ss_pred CCCCCceEEEcCeEEEcCCCCCCCc
Q 020815 221 QSCMDPNVMEAKVVVSSCGHDGPFG 245 (321)
Q Consensus 221 ~~~g~~~~i~a~~VI~AtG~~~~~~ 245 (321)
|+..+++||+||.|+|..+...
T Consensus 145 ---g~~~~~~a~~vV~AdG~~S~vr 166 (394)
T 1k0i_A 145 ---GERLRLDCDYIAGCDGFHGISR 166 (394)
T ss_dssp ---TEEEEEECSEEEECCCTTCSTG
T ss_pred ---CcEEEEEeCEEEECCCCCcHHH
Confidence 1223799999999999877643
No 44
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.41 E-value=1.2e-12 Score=121.01 Aligned_cols=136 Identities=19% Similarity=0.180 Sum_probs=86.5
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhc---c-------chHH-------HHH-
Q 020815 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVV---R-------KPAH-------IFL- 150 (321)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~---~-------~~~~-------~~l- 150 (321)
.++||+|||||++|+++|++|++. |++|+|||+....+|.+...+........ . .... +.+
T Consensus 16 ~~~dvvIIGgG~~Gl~~A~~La~~-G~~V~llE~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 94 (382)
T 1ryi_A 16 RHYEAVVIGGGIIGSAIAYYLAKE-NKNTALFESGTMGGRTTSAAAGMLGAHAECEERDAFFDFAMHSQRLYKGLGEELY 94 (382)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSTTTTHHHHCCCBCCGGGSCSSCSHHHHHHHHHHHHTTTHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC-CCcEEEEeCCCCCcccchhcCceeccCccCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 368999999999999999999999 99999999986555443332222111110 0 0000 000
Q ss_pred HHcCCCcc--cC----------------------------------------CC----eE----EEecHHHHHHHHHHHH
Q 020815 151 DELGIDYD--EQ----------------------------------------DN----YV----VIKHAALFTSTIMSKL 180 (321)
Q Consensus 151 ~~~g~~~~--~~----------------------------------------~~----~~----~~~~~~~~~~~l~~~~ 180 (321)
+..+..+. .. .. +. ...+...+.+.|.+.+
T Consensus 95 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 174 (382)
T 1ryi_A 95 ALSGVDIRQHNGGMFKLAFSEEDVLQLRQMDDLDSVSWYSKEEVLEKEPYASGDIFGASFIQDDVHVEPYFVCKAYVKAA 174 (382)
T ss_dssp HHHCCCCCCBCCCEEEEESSHHHHHHHHTTTTSTTEEEEEHHHHHHHCTTSCTTCCEEEEETTCCBCCHHHHHHHHHHHH
T ss_pred HhhCCCcCeeecceEEEEeCHHHHHHHHHHhhcCCeEEECHHHHHHhCCCCCcccceEEEeCCCeEEcHHHHHHHHHHHH
Confidence 11121110 00 00 00 0123466778888888
Q ss_pred HcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 181 LARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 181 ~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
. +.|++++++++|+++..+++++ +|.+.. .+++||.||+|+|.++
T Consensus 175 ~-~~g~~i~~~~~v~~i~~~~~~~-~v~~~~---------------g~~~a~~vV~A~G~~s 219 (382)
T 1ryi_A 175 K-MLGAEIFEHTPVLHVERDGEAL-FIKTPS---------------GDVWANHVVVASGVWS 219 (382)
T ss_dssp H-HTTCEEETTCCCCEEECSSSSE-EEEETT---------------EEEEEEEEEECCGGGT
T ss_pred H-HCCCEEEcCCcEEEEEEECCEE-EEEcCC---------------ceEEcCEEEECCChhH
Confidence 7 5799999999999998877766 555521 3799999999999654
No 45
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.41 E-value=1.8e-12 Score=126.89 Aligned_cols=138 Identities=25% Similarity=0.337 Sum_probs=88.6
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC-CCCC-cccc-Ccccchhhhcc------chHHHHHHHcCCCccc
Q 020815 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV-SPGG-GAWL-GGQLFSAMVVR------KPAHIFLDELGIDYDE 159 (321)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~-~~gg-~~~~-~g~~~~~~~~~------~~~~~~l~~~g~~~~~ 159 (321)
.+|||||||||++|++||++|++. |.+|+|||++. .+|. +|.. .+......+.. .....+.+..++.|..
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~-G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~ 105 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARM-GQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRI 105 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhC-CCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhh
Confidence 369999999999999999999999 99999999974 2332 1110 00000000000 0011222333333321
Q ss_pred C--------CCeEEEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEc
Q 020815 160 Q--------DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEA 231 (321)
Q Consensus 160 ~--------~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a 231 (321)
. .......+...+...|.+.+.+..|++++ +++|+++..+++++.+|.+.+ +.+++|
T Consensus 106 l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~g~V~GV~t~d--------------G~~I~A 170 (651)
T 3ces_A 106 LNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVENDRVVGAVTQM--------------GLKFRA 170 (651)
T ss_dssp ESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEESSSBEEEEEETT--------------SEEEEE
T ss_pred hhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEecCCEEEEEEECC--------------CCEEEC
Confidence 1 01112234466777777777644799995 469999998888898888742 268999
Q ss_pred CeEEEcCCCCC
Q 020815 232 KVVVSSCGHDG 242 (321)
Q Consensus 232 ~~VI~AtG~~~ 242 (321)
|.||+|||+++
T Consensus 171 d~VVLATGt~s 181 (651)
T 3ces_A 171 KAVVLTVGTFL 181 (651)
T ss_dssp EEEEECCSTTT
T ss_pred CEEEEcCCCCc
Confidence 99999999875
No 46
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.41 E-value=2e-12 Score=129.20 Aligned_cols=137 Identities=13% Similarity=0.119 Sum_probs=87.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCC-ccccC-cccchh----------hhc--cchHHHHHH----
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGG-GAWLG-GQLFSA----------MVV--RKPAHIFLD---- 151 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg-~~~~~-g~~~~~----------~~~--~~~~~~~l~---- 151 (321)
++||||||||++|+++|++|++. |++|+|||++..+|+ .+... |.+... ... .....+.++
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~-G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~~ 342 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRR-GAVVTLYCADAQPAQGASGNRQGALYPLLNGKNDALETFFTSAFTFARRQYDQLLE 342 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTT-TCCEEEEESSSSTTCSGGGCSCEEECCCCCSSCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHHC-CCcEEEEeCCCccccccccccCCEEecCCCCCChHHHHHHHHHHHHHHHHHHHhhh
Confidence 58999999999999999999999 999999999865553 33222 221100 000 000111121
Q ss_pred -----------------------------HcCCCcc---c--------------C-CCeE----EEecHHHHHHHHHHHH
Q 020815 152 -----------------------------ELGIDYD---E--------------Q-DNYV----VIKHAALFTSTIMSKL 180 (321)
Q Consensus 152 -----------------------------~~g~~~~---~--------------~-~~~~----~~~~~~~~~~~l~~~~ 180 (321)
+.|++.. . . .... ...+...+...|.+.+
T Consensus 343 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL~~~a 422 (689)
T 3pvc_A 343 QGIAFDHQWCGVSQLAFDDKSRGKIEKMLHTQWPVEFAEAMSREQLSELAGLDCAHDGIHYPAGGWLCPSDLTHALMMLA 422 (689)
T ss_dssp TTCCCCEECCCEEEECCSHHHHHHHHHHTTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHHHHHHHH
T ss_pred hccccccccCceEEeccCHHHHHHHHHHHhcCCChHHhhccCHHHHHHhcCCCcccceEEecCCeEECHHHHHHHHHHHH
Confidence 1222211 0 0 0000 1224567888888888
Q ss_pred HcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCce-EEEcCeEEEcCCCCCC
Q 020815 181 LARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPN-VMEAKVVVSSCGHDGP 243 (321)
Q Consensus 181 ~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~-~i~a~~VI~AtG~~~~ 243 (321)
. +.|++|+++++|++|..+++++ .|.+.+ +. +++||.||+|+|+++.
T Consensus 423 ~-~~Gv~i~~~t~V~~l~~~~~~v-~V~t~~--------------G~~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 423 Q-QNGMTCHYQHELQRLKRIDSQW-QLTFGQ--------------SQAAKHHATVILATGHRLP 470 (689)
T ss_dssp H-HTTCEEEESCCEEEEEECSSSE-EEEEC---------------CCCCEEESEEEECCGGGTT
T ss_pred H-hCCCEEEeCCeEeEEEEeCCeE-EEEeCC--------------CcEEEECCEEEECCCcchh
Confidence 7 5799999999999999887764 454422 13 6899999999998764
No 47
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.41 E-value=1.1e-12 Score=128.63 Aligned_cols=146 Identities=23% Similarity=0.288 Sum_probs=93.4
Q ss_pred cccEEEECCChHHHHHHHHhhcC-----CCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCccc-----
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKN-----PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDE----- 159 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~-----~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~----- 159 (321)
+|||||||||++|+++|+.|++. +|++|+||||...+|+....++.+....+ . .....+.+.+.++..
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l-~-~ll~~~~~~g~~~~~~~~~~ 112 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAF-E-ELFPDWKEKGAPLNTPVTED 112 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHH-H-HHCTTHHHHTCCCCEECCEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHH-H-HHHHHHHhcCCceeeeechh
Confidence 58999999999999999999985 27999999999877765433332211100 0 000011111221110
Q ss_pred ---------------------CCCeEEEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEEC-CEEEEEEEeecceecc
Q 020815 160 ---------------------QDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-GRVGGVVTNWALVSMN 217 (321)
Q Consensus 160 ---------------------~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~-~~v~gv~~~~~~~~~~ 217 (321)
........+...+.+.|.+++. +.|++|+++++|+++..++ +++.+|.+.+.. .+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~-~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g--~~ 189 (584)
T 2gmh_A 113 RFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAE-ALGVEVYPGYAAAEILFHEDGSVKGIATNDVG--IQ 189 (584)
T ss_dssp EEEEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHH-HTTCEEETTCCEEEEEECTTSSEEEEEECCEE--EC
T ss_pred heeeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHH-HcCCEEEcCCEEEEEEEcCCCCEEEEEeCCcc--cc
Confidence 0000123355678888888887 4699999999999999875 578888774200 00
Q ss_pred cCCCCCCC-------ceEEEcCeEEEcCCCCCCC
Q 020815 218 HDTQSCMD-------PNVMEAKVVVSSCGHDGPF 244 (321)
Q Consensus 218 ~~~~~~g~-------~~~i~a~~VI~AtG~~~~~ 244 (321)
.+|+ +.+++||+||+|+|.++.+
T Consensus 190 ----~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~v 219 (584)
T 2gmh_A 190 ----KDGAPKTTFERGLELHAKVTIFAEGCHGHL 219 (584)
T ss_dssp ----TTSCEEEEEECCCEEECSEEEECCCTTCHH
T ss_pred ----CCCCcccccCCceEEECCEEEEeeCCCchH
Confidence 0111 2579999999999977643
No 48
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.40 E-value=1e-12 Score=122.41 Aligned_cols=134 Identities=20% Similarity=0.310 Sum_probs=86.7
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCC--CccccCcccchh----------------------------
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPG--GGAWLGGQLFSA---------------------------- 139 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~g--g~~~~~g~~~~~---------------------------- 139 (321)
++||+|||||++|+++|++|++. |++|+|||+....+ |.++....++..
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~-G~~V~vlE~~~~~~~~gas~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAER-GHRVLVLERHTFFNENGGTSGAERHWRLQYTQEDLFRLTLETLPLWRALESRCERR 82 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCTTCSSSSCCSSEEEECSCCSSHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCCCCCCCCCCcCeEEEeccCcchhhhHHHHHHHHHHHHHHHhCcc
Confidence 58999999999999999999999 99999999987554 333211111000
Q ss_pred hh--------c--------c--chHHHHHHHcCCCcccC--------------C-Ce-E------EEecHHHHHHHHHHH
Q 020815 140 MV--------V--------R--KPAHIFLDELGIDYDEQ--------------D-NY-V------VIKHAALFTSTIMSK 179 (321)
Q Consensus 140 ~~--------~--------~--~~~~~~l~~~g~~~~~~--------------~-~~-~------~~~~~~~~~~~l~~~ 179 (321)
.. . . ....+++.+.|+++... . .. . -..+...+...|.+.
T Consensus 83 ~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 162 (397)
T 2oln_A 83 LIHEIGSLWFGDTDVVTNEGQISGTAAMMDKLSVRYEWLKATDIERRFGFRGLPRDYEGFLQPDGGTIDVRGTLAALFTL 162 (397)
T ss_dssp CEECCCEEEEECSSCCBTTBCHHHHHHHHHHTTCCCEEEEHHHHHHHHCCCSCCTTCEEEEETTCEEEEHHHHHHHHHHH
T ss_pred HHHHCCcEEEcCCCccchhHHHHHHHHHHHHcCCCceecCHHHHHhhCcCccCCCceeEEEcCCCCEEcHHHHHHHHHHH
Confidence 00 0 0 01123344445432110 0 00 0 022446677888887
Q ss_pred HHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 180 LLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 180 ~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
+. +.|++++++++|++|..+++.+. |.+. ..+++||.||+|+|++
T Consensus 163 a~-~~Gv~i~~~~~V~~i~~~~~~v~-v~t~---------------~g~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 163 AQ-AAGATLRAGETVTELVPDADGVS-VTTD---------------RGTYRAGKVVLACGPY 207 (397)
T ss_dssp HH-HTTCEEEESCCEEEEEEETTEEE-EEES---------------SCEEEEEEEEECCGGG
T ss_pred HH-HcCCEEECCCEEEEEEEcCCeEE-EEEC---------------CCEEEcCEEEEcCCcC
Confidence 76 57999999999999998877643 4331 1479999999999954
No 49
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.38 E-value=5.3e-12 Score=123.50 Aligned_cols=137 Identities=18% Similarity=0.264 Sum_probs=90.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC-CCCCc-ccc-Ccccchhhhcc------chHHHHHHHcCCCcccC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV-SPGGG-AWL-GGQLFSAMVVR------KPAHIFLDELGIDYDEQ 160 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~-~~gg~-~~~-~g~~~~~~~~~------~~~~~~l~~~g~~~~~~ 160 (321)
+|||||||||++|++||++|++. |.+|+|||+.. .+|+. |.. .+......+.+ .....+++..++.|...
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr~-G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l 99 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVARG-GLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRML 99 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEE
T ss_pred cCCEEEECccHHHHHHHHHHHHC-CCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhc
Confidence 69999999999999999999999 99999999974 34432 111 01110000000 01122334444444321
Q ss_pred -----C---CeEEEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcC
Q 020815 161 -----D---NYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAK 232 (321)
Q Consensus 161 -----~---~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~ 232 (321)
. ......+...+...+.+.+.+.+|++++.. .|+++..++++|.||.+.+ +.+++||
T Consensus 100 ~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~-~V~~L~~d~g~V~GV~t~~--------------G~~i~Ad 164 (641)
T 3cp8_A 100 NRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQD-TVIGVSANSGKFSSVTVRS--------------GRAIQAK 164 (641)
T ss_dssp CSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEEC-CEEEEEEETTEEEEEEETT--------------SCEEEEE
T ss_pred ccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEee-EEEEEEecCCEEEEEEECC--------------CcEEEeC
Confidence 0 111234556777888777775479999765 8999999999999888742 2589999
Q ss_pred eEEEcCCCCC
Q 020815 233 VVVSSCGHDG 242 (321)
Q Consensus 233 ~VI~AtG~~~ 242 (321)
.||+|||++.
T Consensus 165 ~VVLATG~~s 174 (641)
T 3cp8_A 165 AAILACGTFL 174 (641)
T ss_dssp EEEECCTTCB
T ss_pred EEEECcCCCC
Confidence 9999999873
No 50
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.37 E-value=6.4e-12 Score=122.30 Aligned_cols=141 Identities=14% Similarity=0.177 Sum_probs=88.1
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcC---------CCccc
Q 020815 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELG---------IDYDE 159 (321)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g---------~~~~~ 159 (321)
.++||+|||||++|+++|+.|++. |++|+||||...++.... +..+ .....+.++++| .++..
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~-G~~V~vlEr~~~~~~~~~-~~~l------~~~~~~~l~~lGl~~~~~~~~~~~~~ 96 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHR-QVGHLVVEQTDGTITHPR-VGTI------GPRSMELFRRWGVAKQIRTAGWPGDH 96 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCSCCSSCC-CCEE------CHHHHHHHHHTTCHHHHHTSSCCTTS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCCCCCCCCc-eeee------CHHHHHHHHHcCChHHHHhhcCCccc
Confidence 468999999999999999999999 999999999876543211 1111 111222222222 11100
Q ss_pred -------------------------------CCCeEEEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEE
Q 020815 160 -------------------------------QDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVV 208 (321)
Q Consensus 160 -------------------------------~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~ 208 (321)
........+...+.+.|.+.+.+ . ++++++|+++..+++.+. +.
T Consensus 97 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~-~---v~~~~~v~~~~~~~~~v~-v~ 171 (549)
T 2r0c_A 97 PLDAAWVTRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGE-R---LRTRSRLDSFEQRDDHVR-AT 171 (549)
T ss_dssp BCCEEEESSBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGG-G---EECSEEEEEEEECSSCEE-EE
T ss_pred ccceEEeccCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHH-h---cccCcEEEEEEEeCCEEE-EE
Confidence 00011233455677777777763 3 999999999998877655 33
Q ss_pred EeecceecccCCCCCCCceEEEcCeEEEcCCCCCCCcchhhhhhhhcC
Q 020815 209 TNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIG 256 (321)
Q Consensus 209 ~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~~~~~~~~~~~~~g 256 (321)
+.+ . .+|+..+++||+||.|+|++ +.+|+..+++
T Consensus 172 ~~~------~---~~G~~~~i~a~~vVgADG~~-----S~vR~~lg~~ 205 (549)
T 2r0c_A 172 ITD------L---RTGATRAVHARYLVACDGAS-----SPTRKALGID 205 (549)
T ss_dssp EEE------T---TTCCEEEEEEEEEEECCCTT-----CHHHHHHTCC
T ss_pred EEE------C---CCCCEEEEEeCEEEECCCCC-----cHHHHHcCCC
Confidence 321 0 11233689999999999954 4455555443
No 51
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.37 E-value=9.2e-12 Score=116.82 Aligned_cols=39 Identities=36% Similarity=0.502 Sum_probs=36.3
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCcc
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA 130 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~ 130 (321)
+||+|||||++|++||++|++. |.+|+|||+++.+||.+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~-G~~V~vlE~~~~~GG~~ 39 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKA-GHEVEVFERLPITGGRF 39 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHT-TCEEEEECSSSSSBTTS
T ss_pred CcEEEECCCHHHHHHHHHHHhC-CCceEEEeCCCCCCCce
Confidence 4899999999999999999999 99999999998888765
No 52
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.36 E-value=4.1e-12 Score=118.57 Aligned_cols=138 Identities=17% Similarity=0.205 Sum_probs=83.2
Q ss_pred cccCCcccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCC---------
Q 020815 85 MITYADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGI--------- 155 (321)
Q Consensus 85 ~~~~~~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~--------- 155 (321)
|..+.++||+|||||++|+++|+.|++. |++|+|||+.+.++... .++.+. +......+.++++|+
T Consensus 21 M~~~~~~dV~IVGaG~aGl~~A~~L~~~-G~~v~v~E~~~~~~~~~-~g~~~~---~~~~~~~~~l~~~gl~~~~~~~~~ 95 (398)
T 2xdo_A 21 MNLLSDKNVAIIGGGPVGLTMAKLLQQN-GIDVSVYERDNDREARI-FGGTLD---LHKGSGQEAMKKAGLLQTYYDLAL 95 (398)
T ss_dssp --CCTTCEEEEECCSHHHHHHHHHHHTT-TCEEEEEECSSSTTCCC-CSCCEE---CCTTTHHHHHHHTTCHHHHHHHCB
T ss_pred ccccCCCCEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCCccccc-cCCeee---eCCccHHHHHHhcChHHHHHHhhc
Confidence 3333468999999999999999999999 99999999986543211 111110 000011222333222
Q ss_pred Cc-----ccCC-------------CeEEEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecc
Q 020815 156 DY-----DEQD-------------NYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMN 217 (321)
Q Consensus 156 ~~-----~~~~-------------~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~ 217 (321)
+. +..+ ......+...+.+.|.+.+. +++++++++|+++..+++.+. |.+.
T Consensus 96 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~---~~~i~~~~~v~~i~~~~~~v~-v~~~------- 164 (398)
T 2xdo_A 96 PMGVNIADEKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLE---NDTVIWDRKLVMLEPGKKKWT-LTFE------- 164 (398)
T ss_dssp CCCEEEECSSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSC---TTSEEESCCEEEEEECSSSEE-EEET-------
T ss_pred ccceEEECCCCCchhhccccccCCCCCceECHHHHHHHHHhhcC---CCEEEECCEEEEEEECCCEEE-EEEC-------
Confidence 10 0000 00112344566666666542 378999999999988776443 3332
Q ss_pred cCCCCCCCceEEEcCeEEEcCCCCCCCc
Q 020815 218 HDTQSCMDPNVMEAKVVVSSCGHDGPFG 245 (321)
Q Consensus 218 ~~~~~~g~~~~i~a~~VI~AtG~~~~~~ 245 (321)
++.+++||+||+|+|..+...
T Consensus 165 -------~g~~~~ad~vV~AdG~~S~vR 185 (398)
T 2xdo_A 165 -------NKPSETADLVILANGGMSKVR 185 (398)
T ss_dssp -------TSCCEEESEEEECSCTTCSCC
T ss_pred -------CCcEEecCEEEECCCcchhHH
Confidence 124689999999999877543
No 53
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.36 E-value=1.3e-11 Score=115.16 Aligned_cols=128 Identities=20% Similarity=0.270 Sum_probs=85.0
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCc------------
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDY------------ 157 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~------------ 157 (321)
.+||+|||||++|+++|+.|++. |++|+|+|+.+.+... .+.. ........+.++++|+..
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~-G~~v~v~E~~~~~~~~--~~~g----~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~ 77 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDA-GVDVDVYERSPQPLSG--FGTG----IVVQPELVHYLLEQGVELDSISVPSSSMEY 77 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSCCC--CSCE----EECCHHHHHHHHHTTCCGGGTCBCCCEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhC-CCCEEEEecCCCCCCc--cccc----cccChhHHHHHHHcCCccccccccccceEE
Confidence 58999999999999999999999 9999999998653111 0111 112334556777776532
Q ss_pred -cc-CCCeEE-------EecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceE
Q 020815 158 -DE-QDNYVV-------IKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNV 228 (321)
Q Consensus 158 -~~-~~~~~~-------~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~ 228 (321)
+. .+.... ..+...+.+.|.+.+ .+++++++++|+++..+++.+. |.+. ++.+
T Consensus 78 ~~~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~v~-v~~~--------------~g~~ 139 (397)
T 2vou_A 78 VDALTGERVGSVPADWRFTSYDSIYGGLYELF---GPERYHTSKCLVGLSQDSETVQ-MRFS--------------DGTK 139 (397)
T ss_dssp EETTTCCEEEEEECCCCEEEHHHHHHHHHHHH---CSTTEETTCCEEEEEECSSCEE-EEET--------------TSCE
T ss_pred EecCCCCccccccCcccccCHHHHHHHHHHhC---CCcEEEcCCEEEEEEecCCEEE-EEEC--------------CCCE
Confidence 00 111000 122345666665554 4899999999999988776543 3332 1257
Q ss_pred EEcCeEEEcCCCCC
Q 020815 229 MEAKVVVSSCGHDG 242 (321)
Q Consensus 229 i~a~~VI~AtG~~~ 242 (321)
++||+||+|+|..+
T Consensus 140 ~~ad~vV~AdG~~S 153 (397)
T 2vou_A 140 AEANWVIGADGGAS 153 (397)
T ss_dssp EEESEEEECCCTTC
T ss_pred EECCEEEECCCcch
Confidence 99999999999554
No 54
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.36 E-value=2.1e-12 Score=124.13 Aligned_cols=135 Identities=19% Similarity=0.126 Sum_probs=90.4
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCC-----cccCCCe
Q 020815 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGID-----YDEQDNY 163 (321)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~-----~~~~~~~ 163 (321)
..+||+|||||++|+++|+.|++. |++|+|||+.+.+|+.... .......+.+..+|+. |... .+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~-G~~V~liEk~~~~g~~~~~--------~~~~~~~~~l~~~g~~~~~~~~~~~-~~ 160 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALL-GARVVLVEKRIKFSRHNVL--------HLWPFTIHDLRALGAKKFYGRFCTG-TL 160 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCSSCCCCCEE--------ECCHHHHHHHHTTTHHHHCTTTTCT-TC
T ss_pred CCCCEEEECccHHHHHHHHHHHHC-CCeEEEEEeccccCCCCcc--------cCChhHHHHHHHcCCcccccccccc-cc
Confidence 468999999999999999999999 9999999998776542110 0112233445555441 2111 11
Q ss_pred EEEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEE--CCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 164 VVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK--GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 164 ~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~--~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
. ..+...+...|.+.+. +.|++++++++|+++..+ ++....|.+.. . .+|+..+++||+||+|+|+.
T Consensus 161 ~-~~~~~~l~~~L~~~~~-~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~------~---~~g~~~~i~ad~VV~A~G~~ 229 (497)
T 2bry_A 161 D-HISIRQLQLLLLKVAL-LLGVEIHWGVKFTGLQPPPRKGSGWRAQLQP------N---PPAQLASYEFDVLISAAGGK 229 (497)
T ss_dssp C-EEEHHHHHHHHHHHHH-HTTCEEEESCEEEEEECCCSTTCCBEEEEES------C---CCHHHHTCCBSEEEECCCTT
T ss_pred c-cCCHHHHHHHHHHHHH-hCCCEEEeCCEEEEEEEecCCCCEEEEEEEE------C---CCCCEEEEEcCEEEECCCCC
Confidence 1 2345677788888776 479999999999999864 23344454421 0 01122468999999999988
Q ss_pred CCC
Q 020815 242 GPF 244 (321)
Q Consensus 242 ~~~ 244 (321)
+..
T Consensus 230 S~~ 232 (497)
T 2bry_A 230 FVP 232 (497)
T ss_dssp CCC
T ss_pred ccc
Confidence 754
No 55
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.36 E-value=7.8e-12 Score=115.76 Aligned_cols=134 Identities=18% Similarity=0.229 Sum_probs=86.0
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCC--CccccCcccchh----------hhc---------------
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPG--GGAWLGGQLFSA----------MVV--------------- 142 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~g--g~~~~~g~~~~~----------~~~--------------- 142 (321)
++||+|||||++|+++|++|++. |.+|+|||+....+ |.++....+... +..
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~-G~~V~vie~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~ 81 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQ-GVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGREYVPLALRSQELWYELEKETHH 81 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCSSCSSSSSCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHHHCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCCCCCCCCCCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHhCC
Confidence 58999999999999999999999 99999999986554 443221111100 000
Q ss_pred ---------------c----chHHHHHHHcCCCcccC--------------CCe--E------EEecHHHHHHHHHHHHH
Q 020815 143 ---------------R----KPAHIFLDELGIDYDEQ--------------DNY--V------VIKHAALFTSTIMSKLL 181 (321)
Q Consensus 143 ---------------~----~~~~~~l~~~g~~~~~~--------------~~~--~------~~~~~~~~~~~l~~~~~ 181 (321)
. ....+++...|+++... ... . ...+...+...|.+.+.
T Consensus 82 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 161 (389)
T 2gf3_A 82 KIFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAIFEPNSGVLFSENCIRAYRELAE 161 (389)
T ss_dssp CCEECCCEEEEEETTCCHHHHHHHHHHHHTTCCCEEEETHHHHHHSTTCCCCTTEEEEEETTCEEEEHHHHHHHHHHHHH
T ss_pred cceeecceEEEcCCCchHHHHHHHHHHHHcCCCcEEcCHHHHHHhCCCcccCCCceEEEeCCCcEEeHHHHHHHHHHHHH
Confidence 0 00112233334432110 000 0 12245678888888886
Q ss_pred cCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 182 ARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 182 ~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
+.|++++++++|+++..+++.+ .|.+. ..+++||.||+|+|.+
T Consensus 162 -~~Gv~i~~~~~v~~i~~~~~~~-~v~~~---------------~g~~~a~~vV~A~G~~ 204 (389)
T 2gf3_A 162 -ARGAKVLTHTRVEDFDISPDSV-KIETA---------------NGSYTADKLIVSMGAW 204 (389)
T ss_dssp -HTTCEEECSCCEEEEEECSSCE-EEEET---------------TEEEEEEEEEECCGGG
T ss_pred -HCCCEEEcCcEEEEEEecCCeE-EEEeC---------------CCEEEeCEEEEecCcc
Confidence 5699999999999998876643 24332 1479999999999954
No 56
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.36 E-value=9.9e-12 Score=119.61 Aligned_cols=140 Identities=14% Similarity=0.129 Sum_probs=88.1
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccc------hhh----hccc---------------
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLF------SAM----VVRK--------------- 144 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~------~~~----~~~~--------------- 144 (321)
++||+|||||++|+++|+.|+++ |++|+|||+....+|++.....+. ... +...
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~-G~~V~llE~~~~~~gtS~~s~gli~~g~~~~~~~~~~l~~~~~~~~~~l~~~~~~l 81 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGR-GLSVLMLEAQDLACATSSASSKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAPHI 81 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSTTCSGGGSSCCEECCCGGGGGGTCHHHHHHHHHHHHHHHHHCTTT
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-CCCEEEEECCCCCCCccccccccccccchhhhhchHHHHHHHHHHHHHHHHhCCcc
Confidence 58999999999999999999999 999999999875555443322111 000 0000
Q ss_pred -----------------h----HHHHHHHcC-CCc-c----------c--CCC----eE---EEecHHHHHHHHHHHHHc
Q 020815 145 -----------------P----AHIFLDELG-IDY-D----------E--QDN----YV---VIKHAALFTSTIMSKLLA 182 (321)
Q Consensus 145 -----------------~----~~~~l~~~g-~~~-~----------~--~~~----~~---~~~~~~~~~~~l~~~~~~ 182 (321)
. ....++.++ ..+ + . ... +. ...+...+...|.+.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~P~l~~~~~~~~~~~~g~v~~~~l~~~l~~~a~- 160 (501)
T 2qcu_A 82 AFPMRFRLPHRPHLRPAWMIRIGLFMYDHLGKRTSLPGSTGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVV- 160 (501)
T ss_dssp EEEEEEEEECCTTTSCHHHHHHHHHHHHSSSCCSSSCCCEEEECCTTSSBCTTCCEEEEEEEEEECHHHHHHHHHHHHH-
T ss_pred ccccCeEeccCcccchHHHHHHHHHHHHhcCCcEEECHHHHHHhhcCCCcchhceEEEEeeCCEEcHHHHHHHHHHHHH-
Confidence 0 001111111 100 0 0 000 00 12356778888888887
Q ss_pred CCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 183 RPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 183 ~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
+.|++++++++|+++..++ ++.+|.+.+. .+|+..+++||.||+|+|.+
T Consensus 161 ~~Gv~i~~~~~V~~l~~~~-~~~~V~~~d~---------~~G~~~~i~A~~VV~AtG~~ 209 (501)
T 2qcu_A 161 RKGGEVLTRTRATSARREN-GLWIVEAEDI---------DTGKKYSWQARGLVNATGPW 209 (501)
T ss_dssp HTTCEEECSEEEEEEEEET-TEEEEEEEET---------TTCCEEEEEESCEEECCGGG
T ss_pred HcCCEEEcCcEEEEEEEeC-CEEEEEEEEC---------CCCCEEEEECCEEEECCChh
Confidence 5799999999999999876 5667766320 01233589999999999954
No 57
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.35 E-value=3.6e-12 Score=122.11 Aligned_cols=46 Identities=30% Similarity=0.427 Sum_probs=40.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLF 137 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~ 137 (321)
+|||+|||||++|+++|+.|++. |++|+|||+ ..+||.|...++++
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~-G~~V~liEk-~~~GG~~~~~gcip 71 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGAL-GKRVAIAEE-YRIGGTCVIRGCVP 71 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHT-TCCEEEEES-SCTTHHHHHHSHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-cCEEEEEeC-CCCCCceeccCccc
Confidence 69999999999999999999999 999999999 57888876655543
No 58
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.35 E-value=1.2e-11 Score=115.89 Aligned_cols=134 Identities=20% Similarity=0.265 Sum_probs=84.9
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCe-EEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCC---------Ccc-
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQ-IAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGI---------DYD- 158 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~-V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~---------~~~- 158 (321)
++||+|||||++|+++|+.|++. |++ |+|||+...++... .+. .......+.|+++|+ +..
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~-G~~~v~v~E~~~~~~~~g--~g~-----~l~~~~~~~l~~lg~~~~l~~~~~~~~~ 75 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQA-GIGKVTLLESSSEIRPLG--VGI-----NIQPAAVEALAELGLGPALAATAIPTHE 75 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESSSSCCCCS--CEE-----EECHHHHHHHHHTTCHHHHHHHSEEECE
T ss_pred CCeEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCCCcccce--eEE-----EEChHHHHHHHHCCChHHHHhhCCCcce
Confidence 58999999999999999999999 999 99999987654311 111 111222233333332 110
Q ss_pred -----cCCC---------------eEEEecHHHHHHHHHHHHHcCCC-cEEEcCceEEEEEEECCEEEEEEEeecceecc
Q 020815 159 -----EQDN---------------YVVIKHAALFTSTIMSKLLARPN-VKLFNAVAAEDLIVKGGRVGGVVTNWALVSMN 217 (321)
Q Consensus 159 -----~~~~---------------~~~~~~~~~~~~~l~~~~~~~~g-v~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~ 217 (321)
..+. .....+...+.+.|++.+.+..| ++++++++|+++.. ++.+. +.+.+
T Consensus 76 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~-v~~~~------ 147 (410)
T 3c96_A 76 LRYIDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRV-LIGAR------ 147 (410)
T ss_dssp EEEECTTSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEE-EEEEE------
T ss_pred EEEEcCCCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccE-EEEec------
Confidence 0000 01234556788888888764334 68999999999987 44343 33321
Q ss_pred cCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 218 HDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 218 ~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
. .+|+..+++||+||.|+|..+
T Consensus 148 ~---~~g~~~~~~ad~vV~AdG~~S 169 (410)
T 3c96_A 148 D---GHGKPQALGADVLVGADGIHS 169 (410)
T ss_dssp E---TTSCEEEEEESEEEECCCTTC
T ss_pred C---CCCCceEEecCEEEECCCccc
Confidence 0 012336799999999999554
No 59
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.35 E-value=3.5e-12 Score=122.16 Aligned_cols=49 Identities=35% Similarity=0.497 Sum_probs=40.6
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC---------CCCCccccCcccch
Q 020815 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV---------SPGGGAWLGGQLFS 138 (321)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~---------~~gg~~~~~g~~~~ 138 (321)
.+|||+|||||++|+++|+.|++. |++|+|||+.. ..||.|.+.+|++.
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~-G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPs 65 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLN-GARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPK 65 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCEEEEEEeccccccccccCCcCCeecccCchhh
Confidence 369999999999999999999999 99999999421 36888876666543
No 60
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.35 E-value=1.1e-12 Score=119.63 Aligned_cols=130 Identities=21% Similarity=0.274 Sum_probs=84.4
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecH
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 169 (321)
++||+|||||++|+++|+.|++. |++|+|||+.+.+||.+... .....+..... ...-.+.++... ...+...
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~-g~~v~vie~~~~~gg~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~ 75 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRS-GLSYVILDAEASPGGAWQHA--WHSLHLFSPAG--WSSIPGWPMPAS--QGPYPAR 75 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHS-SCCEEEECCSSSSSGGGGGS--CTTCBCSSCGG--GSCCSSSCCCCC--SSSSCBH
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCCCCCCcccCC--CCCcEecCchh--hhhCCCCCCCCC--ccCCCCH
Confidence 48999999999999999999999 99999999998887764321 00000000000 000011111111 0111234
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
..+...+.+.+. +.+++++++++|+++..+++.+.+|.+. + .++++|+||+|+|..+
T Consensus 76 ~~~~~~l~~~~~-~~~~~~~~~~~v~~i~~~~~~~~~v~~~--------------~-g~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 76 AEVLAYLAQYEQ-KYALPVLRPIRVQRVSHFGERLRVVARD--------------G-RQWLARAVISATGTWG 132 (357)
T ss_dssp HHHHHHHHHHHH-HTTCCEECSCCEEEEEEETTEEEEEETT--------------S-CEEEEEEEEECCCSGG
T ss_pred HHHHHHHHHHHH-HcCCEEEcCCEEEEEEECCCcEEEEEeC--------------C-CEEEeCEEEECCCCCC
Confidence 566666666555 6799999999999999888765434432 1 3799999999999654
No 61
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.34 E-value=1.3e-11 Score=122.30 Aligned_cols=147 Identities=20% Similarity=0.256 Sum_probs=90.0
Q ss_pred cccEEEECCChHHHHHHHHhhc-CCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCC------------
Q 020815 90 DTDVVVVGAGSAGLSCAYELSK-NPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGID------------ 156 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~-~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~------------ 156 (321)
++||+|||||++|+++|+.|++ . |++|+||||...+..... +.. ......+.++++|+.
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~-G~~V~viEr~~~~~~~g~-a~~------l~~~t~e~l~~lGl~~~~~~~~~~~~~ 103 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFP-DIRTCIVEQKEGPMELGQ-ADG------IACRTMEMFEAFEFADSILKEACWIND 103 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCT-TSCEEEECSSSSCCSSCS-CCE------ECHHHHHHHHHTTCHHHHHHHSEEECE
T ss_pred CCcEEEECcCHHHHHHHHHHHHhC-CCCEEEEeCCCCCCCCCc-eee------eCHHHHHHHHHcCcHHHHHHhcccccc
Confidence 5899999999999999999999 9 999999999875532211 111 111222333333321
Q ss_pred ---ccc---------------------CCCeEEEecHHHHHHHHHHHHHcCC-CcEEEcCceEEEEEEECC---EEEEEE
Q 020815 157 ---YDE---------------------QDNYVVIKHAALFTSTIMSKLLARP-NVKLFNAVAAEDLIVKGG---RVGGVV 208 (321)
Q Consensus 157 ---~~~---------------------~~~~~~~~~~~~~~~~l~~~~~~~~-gv~i~~~~~v~~l~~~~~---~v~gv~ 208 (321)
+.. ........+...+.+.|.+.+.+.. +++++++++|+++..+++ ..+.|.
T Consensus 104 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~ 183 (639)
T 2dkh_A 104 VTFWKPDPGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVT 183 (639)
T ss_dssp EEEEEECTTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEE
T ss_pred eEEECCCCCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEE
Confidence 000 0011234456778888888887433 349999999999988752 223343
Q ss_pred EeecceecccCCCCCCCceEEEcCeEEEcCCCCCCCcchhhhhhhhc
Q 020815 209 TNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSI 255 (321)
Q Consensus 209 ~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~~~~~~~~~~~~~ 255 (321)
+.+ .+ ...+|+..+++||+||.|+|+++ .+|+...+
T Consensus 184 ~~~----~~--~~~~G~~~~i~a~~vVgADG~~S-----~vR~~lg~ 219 (639)
T 2dkh_A 184 LER----CD--AAHAGQIETVQARYVVGCDGARS-----NVRRAIGR 219 (639)
T ss_dssp EEE----CS--GGGTTCEEEEEEEEEEECCCTTC-----HHHHHTTC
T ss_pred EEe----cc--ccCCCCeEEEEeCEEEECCCcch-----HHHHHhCC
Confidence 321 00 00012346899999999999554 45554443
No 62
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.33 E-value=6.2e-12 Score=112.96 Aligned_cols=113 Identities=20% Similarity=0.278 Sum_probs=71.6
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEec
Q 020815 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKH 168 (321)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~ 168 (321)
++|||+|||||+||++||++|++. |++|+|||++ .+||..... . .++.. .+. ..
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~-g~~v~lie~~-~~gg~~~~~--~----------------~~~~~--~~~----~~ 58 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRA-RKQIALFDNN-TNRNRVTQN--S----------------HGFIT--RDG----IK 58 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECS-CCGGGGSSC--B----------------CCSTT--CTT----BC
T ss_pred CCcCEEEECCCHHHHHHHHHHHHC-CCCEEEEeCC-CCCCeeeee--c----------------CCccC--CCC----CC
Confidence 369999999999999999999999 9999999997 344432110 0 01100 000 12
Q ss_pred HHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 169 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 169 ~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
..++....++++.+..++.++.. .+..+...+....-+.+. ++.++++|.||+|||...
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~--------------~g~~~~a~~liiATGs~p 117 (304)
T 4fk1_A 59 PEEFKEIGLNEVMKYPSVHYYEK-TVVMITKQSTGLFEIVTK--------------DHTKYLAERVLLATGMQE 117 (304)
T ss_dssp HHHHHHHHHHHHTTSTTEEEEEC-CEEEEEECTTSCEEEEET--------------TCCEEEEEEEEECCCCEE
T ss_pred HHHHHHHHHHHHHhcCCEEEEee-EEEEeeecCCCcEEEEEC--------------CCCEEEeCEEEEccCCcc
Confidence 34556666666765556666665 455554443322333332 236899999999999643
No 63
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.32 E-value=9.9e-12 Score=126.64 Aligned_cols=136 Identities=24% Similarity=0.330 Sum_probs=92.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeccCCC--CCccccC-cccch-------------------hhh-----
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSVSP--GGGAWLG-GQLFS-------------------AMV----- 141 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~~~~--gg~~~~~-g~~~~-------------------~~~----- 141 (321)
++||||||||++|+++|++|++. |. +|+|||++... +|+++.. |.+.. .+.
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~~-G~~~V~vlE~~~~~~~~gss~~~~G~~~~~~~~~~~~~l~~~s~~~~~~l~~~~~~ 82 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVTR-GWNNITVLDQGPLNMPGGSTSHAPGLVFQTNPSKTMASFAKYTVEKLLSLTEDGVS 82 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCCEEEECSSCTTCCCSGGGTCCCEECCCCSCHHHHHHHHHHHHHHHHCEETTEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEeCCCCCCCcccceeCCceeecCCCCHHHHHHHHHHHHHHHHHHhhCCC
Confidence 58999999999999999999999 98 99999998753 4443332 22110 000
Q ss_pred -----------ccc-------hHHHHHHHcCCCcccC------------------CCeE----EEecHHHHHHHHHHHHH
Q 020815 142 -----------VRK-------PAHIFLDELGIDYDEQ------------------DNYV----VIKHAALFTSTIMSKLL 181 (321)
Q Consensus 142 -----------~~~-------~~~~~l~~~g~~~~~~------------------~~~~----~~~~~~~~~~~l~~~~~ 181 (321)
... ...+++..+|+++... ..++ ...+...+...|.+.+.
T Consensus 83 ~~~~~G~l~~~~~~~~~~~l~~~~~~~~~~G~~~~~l~~~e~~~~~p~l~~~~~~gg~~~~~~g~v~p~~l~~~L~~~a~ 162 (830)
T 1pj5_A 83 CFNQVGGLEVATTETRLADLKRKLGYAAAWGIEGRLLSPAECQELYPLLDGENILGGLHVPSDGLASAARAVQLLIKRTE 162 (830)
T ss_dssp SEECCCEEEEESSHHHHHHHHHHHHHHHHHTCCCEEECHHHHHHHCTTSCGGGCCEEEEETTCEEECHHHHHHHHHHHHH
T ss_pred CeeecCcEEEEeCHHHHHHHHHHHHHHHHcCCCeEEECHHHHHHhCccCCccceEEEEEECCCceEcHHHHHHHHHHHHH
Confidence 000 0112334445432210 0000 12356778888888887
Q ss_pred cCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 182 ARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 182 ~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
+.|++++++++|++|..+++++.+|.+.. .+++||.||+|+|.++
T Consensus 163 -~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~---------------G~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 163 -SAGVTYRGSTTVTGIEQSGGRVTGVQTAD---------------GVIPADIVVSCAGFWG 207 (830)
T ss_dssp -HTTCEEECSCCEEEEEEETTEEEEEEETT---------------EEEECSEEEECCGGGH
T ss_pred -HcCCEEECCceEEEEEEeCCEEEEEEECC---------------cEEECCEEEECCccch
Confidence 57999999999999999888888887632 4799999999999653
No 64
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.32 E-value=3.9e-11 Score=117.19 Aligned_cols=141 Identities=16% Similarity=0.180 Sum_probs=90.0
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCccc------chhh-----------------------
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQL------FSAM----------------------- 140 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~------~~~~----------------------- 140 (321)
++||+|||||++|+++|+.|+++ |++|+|||++...+|++.....+ +...
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~r-G~~V~LlE~~~~~~GtS~~s~gli~~g~ryl~~~~~~l~~~~~~e~~~l~~~~~~~ 110 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAAS-GIKTGLIEMQDFAEGTSSRSTKLVHGGIRYLKTFDVEVVADTVGERAVVQGIAPHI 110 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSTTCSGGGSSCSEECCCGGGGGGTCHHHHHHHHHHHHHHHHHCTTS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCcEEEEeCCCCCCCcccccccccccccchhhccChHHHHHHHHHHHHHHHhCccc
Confidence 68999999999999999999999 99999999987665554322111 0000
Q ss_pred ----------hc------c-c-------hHHHHHHH---cCCCcc--------------cCCCe----EE---EecHHHH
Q 020815 141 ----------VV------R-K-------PAHIFLDE---LGIDYD--------------EQDNY----VV---IKHAALF 172 (321)
Q Consensus 141 ----------~~------~-~-------~~~~~l~~---~g~~~~--------------~~~~~----~~---~~~~~~~ 172 (321)
.. . . ...+++.. .+.... ..+.+ .. ..+...+
T Consensus 111 ~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~e~~~~~P~l~~~~~~gg~~~~dg~v~~~~l 190 (571)
T 2rgh_A 111 PKPDPMLLPIYEDEGATTFNMFSVKVAMDLYDKLANVTGTKYENYTLTPEEVLEREPFLKKEGLKGAGVYLDFRNNDARL 190 (571)
T ss_dssp SEECCEEEEEESSSSSCSCCHHHHHHHHHHHHHHHTCSSSTTCCEEECHHHHHHHCTTSCCTTEEEEEEECCEECCHHHH
T ss_pred ccccCceEEeecccccccccHHHHHHHHHHHHHHhhhhccCCCcEEECHHHHHHhCcCCchhhceEEEEecCCeEchHHH
Confidence 00 0 0 00011111 111110 00001 00 1234567
Q ss_pred HHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 173 TSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 173 ~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
...+.+.+. +.|++++++++|+++..+++++.+|.+.+. .+++..+++||.||+|+|.+
T Consensus 191 ~~~l~~~a~-~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~---------~tg~~~~i~A~~VV~AaG~w 249 (571)
T 2rgh_A 191 VIDNIKKAA-EDGAYLVSKMKAVGFLYEGDQIVGVKARDL---------LTDEVIEIKAKLVINTSGPW 249 (571)
T ss_dssp HHHHHHHHH-HTTCEEESSEEEEEEEEETTEEEEEEEEET---------TTCCEEEEEBSCEEECCGGG
T ss_pred HHHHHHHHH-HcCCeEEeccEEEEEEEeCCEEEEEEEEEc---------CCCCEEEEEcCEEEECCChh
Confidence 777777776 679999999999999999988888887431 01233579999999999954
No 65
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.32 E-value=6.9e-12 Score=115.49 Aligned_cols=135 Identities=14% Similarity=0.213 Sum_probs=84.7
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCcc--ccCcccchh----------hhc---------------
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA--WLGGQLFSA----------MVV--------------- 142 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~--~~~g~~~~~----------~~~--------------- 142 (321)
++||+|||||++|+++|++|++. |++|+|||+....++.. +....+... +..
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~-G~~V~vle~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~ 80 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRA-GLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGEGEKYVPLVLRAQMLWDELSRHNED 80 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHT-TCCEEEECSSCSSSSSSSCCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHTTCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCCCCCCCCCCCccceeeeccCCCchHHHHHHHHHHHHHHHHHhCCC
Confidence 58999999999999999999999 99999999986553211 111100000 000
Q ss_pred ---------------c----chHHHHHHHcCCCccc---------------CCCe---E----EEecHHHHHHHHHHHHH
Q 020815 143 ---------------R----KPAHIFLDELGIDYDE---------------QDNY---V----VIKHAALFTSTIMSKLL 181 (321)
Q Consensus 143 ---------------~----~~~~~~l~~~g~~~~~---------------~~~~---~----~~~~~~~~~~~l~~~~~ 181 (321)
. ....+.++.+|+++.. ...+ + ...+...+...|.+.+.
T Consensus 81 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~ 160 (372)
T 2uzz_A 81 DPIFVRSGVINLGPADSTFLANVAHSAEQWQLNVEKLDAQGIMARWPEIRVPDNYIGLFETDSGFLRSELAIKTWIQLAK 160 (372)
T ss_dssp SCSEECCCEEEEEETTCHHHHHHHHHHHHTTCCEEEEEHHHHHHHCTTCCCCTTEEEEEESSCEEEEHHHHHHHHHHHHH
T ss_pred ccceeeeceEEEeCCCcHHHHHHHHHHHHcCCCcEecCHHHHHhhCCCccCCCCceEEEeCCCcEEcHHHHHHHHHHHHH
Confidence 0 0011222333432210 0000 0 12235677888888876
Q ss_pred cCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 182 ARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 182 ~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
+.|++++++++|+++..+++.+ .|.+.. .+++||.||+|+|.++
T Consensus 161 -~~G~~i~~~~~V~~i~~~~~~~-~v~~~~---------------g~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 161 -EAGCAQLFNCPVTAIRHDDDGV-TIETAD---------------GEYQAKKAIVCAGTWV 204 (372)
T ss_dssp -HTTCEEECSCCEEEEEECSSSE-EEEESS---------------CEEEEEEEEECCGGGG
T ss_pred -HCCCEEEcCCEEEEEEEcCCEE-EEEECC---------------CeEEcCEEEEcCCccH
Confidence 5799999999999998876653 344421 3599999999999664
No 66
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.32 E-value=1.2e-11 Score=116.18 Aligned_cols=116 Identities=19% Similarity=0.139 Sum_probs=71.2
Q ss_pred HHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCCCcchhhhh
Q 020815 172 FTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKR 251 (321)
Q Consensus 172 ~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~~~~~~~~~ 251 (321)
+...+.+.+. +.|++++.++.|+++..+++++.+|.+.+ +.++.||.||+|+|..... ..
T Consensus 196 ~~~~l~~~l~-~~GV~i~~~~~v~~i~~~~~~v~~v~l~d--------------G~~i~aD~Vv~a~G~~p~~-----~l 255 (415)
T 3lxd_A 196 LSEFYQAEHR-AHGVDLRTGAAMDCIEGDGTKVTGVRMQD--------------GSVIPADIVIVGIGIVPCV-----GA 255 (415)
T ss_dssp HHHHHHHHHH-HTTCEEEETCCEEEEEESSSBEEEEEESS--------------SCEEECSEEEECSCCEESC-----HH
T ss_pred HHHHHHHHHH-hCCCEEEECCEEEEEEecCCcEEEEEeCC--------------CCEEEcCEEEECCCCccCh-----HH
Confidence 3344444444 67999999999999988788888888743 2689999999999955432 22
Q ss_pred hhhcCCcccccCCceeecccccchhhcccccccccccccccchhhcC----CCCCCCcceeeeeeecchhc
Q 020815 252 LKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEID----GAPRMGPTFGAMMISGQKAA 318 (321)
Q Consensus 252 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~g~~~~~~~----g~~~~~~~~~~~~~~~~~~~ 318 (321)
+...+... ..++.++. +.+...|++|++|+++.... |.+..-+++......|..||
T Consensus 256 ~~~~gl~~----~~gi~vd~-------~~~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa 315 (415)
T 3lxd_A 256 LISAGASG----GNGVDVDE-------FCRTSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAA 315 (415)
T ss_dssp HHHTTCCC----SSSEECCT-------TCBCSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHH
T ss_pred HHhCCCCc----CCCEEECC-------CCCcCCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHH
Confidence 33333311 12233332 22345799999999876544 43333334444444444443
No 67
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.31 E-value=1.3e-11 Score=118.28 Aligned_cols=57 Identities=7% Similarity=0.042 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
..+.+.|.+.+. +.|++|+++++|++|..+++++++|++.+ ++++.||.||.+++..
T Consensus 221 ~~l~~aL~~~~~-~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~--------------g~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 221 GALVQGMIKLFQ-DLGGEVVLNARVSHMETTGNKIEAVHLED--------------GRRFLTQAVASNADVV 277 (501)
T ss_dssp HHHHHHHHHHHH-HTTCEEECSCCEEEEEEETTEEEEEEETT--------------SCEEECSCEEECCC--
T ss_pred cchHHHHHHHHH-HhCCceeeecceeEEEeeCCeEEEEEecC--------------CcEEEcCEEEECCCHH
Confidence 345566666665 67999999999999999999999999853 3789999999988743
No 68
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.31 E-value=2e-11 Score=118.51 Aligned_cols=131 Identities=18% Similarity=0.183 Sum_probs=85.2
Q ss_pred cccEEEECCChHHHHHHHHhh-cCCCCeEEEEeccCCCCCccccC---cc---cchhhhccchHHHHHHHcCCCcccCCC
Q 020815 90 DTDVVVVGAGSAGLSCAYELS-KNPNIQIAIIEQSVSPGGGAWLG---GQ---LFSAMVVRKPAHIFLDELGIDYDEQDN 162 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La-~~~G~~V~liEk~~~~gg~~~~~---g~---~~~~~~~~~~~~~~l~~~g~~~~~~~~ 162 (321)
++||+|||||++|+++|+.|+ +. |++|+|||+++.+||.+... ++ ............+....++.. ..
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~-G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~----~~ 82 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHEL-GLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWK----TT 82 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT-CCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCS----BS
T ss_pred CCCEEEECcCHHHHHHHHHHHHcC-CCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCc----cc
Confidence 589999999999999999999 87 99999999998888765322 11 111111111001111222221 11
Q ss_pred eEEEecHHHHHHHHHHHHHcCCCc--EEEcCceEEEEEEECC-EEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCC
Q 020815 163 YVVIKHAALFTSTIMSKLLARPNV--KLFNAVAAEDLIVKGG-RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCG 239 (321)
Q Consensus 163 ~~~~~~~~~~~~~l~~~~~~~~gv--~i~~~~~v~~l~~~~~-~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG 239 (321)
.....++...+.+.+. +.++ +++++++|+++..+++ ....|.+. ++.++++|+||+|+|
T Consensus 83 ---~~~~~ei~~~l~~~~~-~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~--------------~G~~i~ad~lV~AtG 144 (540)
T 3gwf_A 83 ---YITQPEILEYLEDVVD-RFDLRRHFKFGTEVTSALYLDDENLWEVTTD--------------HGEVYRAKYVVNAVG 144 (540)
T ss_dssp ---EEEHHHHHHHHHHHHH-HTTCGGGEEESCCEEEEEEETTTTEEEEEET--------------TSCEEEEEEEEECCC
T ss_pred ---CCCHHHHHHHHHHHHH-HcCCcceeEeccEEEEEEEeCCCCEEEEEEc--------------CCCEEEeCEEEECCc
Confidence 2344566666655554 5677 8999999999988765 23334442 125799999999999
Q ss_pred CCCC
Q 020815 240 HDGP 243 (321)
Q Consensus 240 ~~~~ 243 (321)
..+.
T Consensus 145 ~~s~ 148 (540)
T 3gwf_A 145 LLSA 148 (540)
T ss_dssp SCCS
T ss_pred cccc
Confidence 7653
No 69
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.31 E-value=5.8e-12 Score=113.38 Aligned_cols=110 Identities=19% Similarity=0.259 Sum_probs=72.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecH
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 169 (321)
+|||+|||||+||++||++|++. |++|+|||+. .+||.|...++++... +.+ ....
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~~-g~~V~liE~~-~~gG~~~~~~~i~~~p-------------~~~---------~~~~ 61 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASRA-NLKTVMIERG-IPGGQMANTEEVENFP-------------GFE---------MITG 61 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESS-CTTGGGGGCSCBCCST-------------TCS---------SBCH
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCCEEEEecC-CCCCeeecccccCCcC-------------Ccc---------ccch
Confidence 79999999999999999999999 9999999996 6888877655543210 000 0123
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
.++......... +.+..+..+..+.........+ +.. +..++++|.+|+|||..
T Consensus 62 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~---------------~~~~~~~d~liiAtGs~ 115 (312)
T 4gcm_A 62 PDLSTKMFEHAK-KFGAVYQYGDIKSVEDKGEYKV--INF---------------GNKELTAKAVIIATGAE 115 (312)
T ss_dssp HHHHHHHHHHHH-HTTCEEEECCCCEEEECSSCEE--EEC---------------SSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHh-hccccccceeeeeeeeeeccee--ecc---------------CCeEEEeceeEEcccCc
Confidence 445555455554 4566666665544443333221 111 23689999999999964
No 70
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.30 E-value=1.1e-11 Score=118.03 Aligned_cols=46 Identities=28% Similarity=0.419 Sum_probs=40.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLF 137 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~ 137 (321)
+|||+|||||++|+++|+.|++. |++|+|||+ ..+||.|...++++
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~-G~~V~liEk-~~~GG~~~~~gcip 50 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAAL-GKKVAIAEE-FRYGGTCVIRGCVP 50 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTT-TCCEEEEES-SCTTHHHHHHSHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-CCEEEEEeC-CCCCCcccccCchh
Confidence 58999999999999999999999 999999999 57888876655544
No 71
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.29 E-value=7.4e-12 Score=103.64 Aligned_cols=146 Identities=19% Similarity=0.227 Sum_probs=90.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
|||+|||||++|+.+|..|++. |.+|+|||+.+..-.... . +.. ..+++. .....
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-g~~v~lie~~~~~~~~~~----~----~~~--------~~~~~~--------~~~~~ 56 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-GLKVLVLDGGRSKVKGVS----R----VPN--------YPGLLD--------EPSGE 56 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSCCTTTTCS----C----CCC--------STTCTT--------CCCHH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCCCcccCch----h----hhc--------cCCCcC--------CCCHH
Confidence 7999999999999999999999 999999999752211000 0 000 000100 01345
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCCCcchhhh
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK 250 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~~~~~~~~ 250 (321)
.+.+.+.+.+. +.|++++.+ +|+++..+++.+ .+.+. ++ ++.+|.||+|+|..+ .+.
T Consensus 57 ~~~~~l~~~~~-~~gv~v~~~-~v~~i~~~~~~~-~v~~~--------------~g-~i~ad~vI~A~G~~~-----~~~ 113 (180)
T 2ywl_A 57 ELLRRLEAHAR-RYGAEVRPG-VVKGVRDMGGVF-EVETE--------------EG-VEKAERLLLCTHKDP-----TLP 113 (180)
T ss_dssp HHHHHHHHHHH-HTTCEEEEC-CCCEEEECSSSE-EEECS--------------SC-EEEEEEEEECCTTCC-----HHH
T ss_pred HHHHHHHHHHH-HcCCEEEeC-EEEEEEEcCCEE-EEEEC--------------CC-EEEECEEEECCCCCC-----Ccc
Confidence 66677777776 579999999 999998765532 23321 22 799999999999653 122
Q ss_pred hhhhcCCcccccCCceeecccccchhhcccccccccccccccchhh
Q 020815 251 RLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAE 296 (321)
Q Consensus 251 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~g~~~~~ 296 (321)
...++. +. ...+..+ ...+...|++|+.|+.+..
T Consensus 114 --~~~g~~--~~-~g~i~vd-------~~~~t~~~~i~a~GD~~~~ 147 (180)
T 2ywl_A 114 --SLLGLT--RR-GAYIDTD-------EGGRTSYPRVYAAGVARGK 147 (180)
T ss_dssp --HHHTCC--EE-TTEECCC-------TTCBCSSTTEEECGGGGTC
T ss_pred --ccCCCC--cc-CceEEeC-------CCCCcCCCCEEEeecccCc
Confidence 222221 11 1111121 1223457999999998753
No 72
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.29 E-value=3.3e-11 Score=114.20 Aligned_cols=140 Identities=19% Similarity=0.100 Sum_probs=85.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC--eEEEEeccCCCCCccccCcccc---------------------------hhh
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQSVSPGGGAWLGGQLF---------------------------SAM 140 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~--~V~liEk~~~~gg~~~~~g~~~---------------------------~~~ 140 (321)
.+||+|||||++|+++|+.|++. |. +|+|+|+...+||.+....+.. ..+
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~-G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAE-KAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCEEEEECccHHHHHHHHHHHhc-CCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 58999999999999999999999 99 9999999988877643322100 000
Q ss_pred hc--cchHHHHHHH-cCCCcccCCCeEEEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecc
Q 020815 141 VV--RKPAHIFLDE-LGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMN 217 (321)
Q Consensus 141 ~~--~~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~ 217 (321)
.. .......+.. .++++... .....+...+.+.|.+.+. +.+..++++++|+++..+++.+. |.+.+
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~-~~~~~i~~~t~V~~v~~~~~~~~-V~~~~------ 154 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKPQ--TLQFPHRHTIQEYQRIYAQ-PLLPFIKLATDVLDIEKKDGSWV-VTYKG------ 154 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCTT--CCSSCBHHHHHHHHHHHHG-GGGGGEECSEEEEEEEEETTEEE-EEEEE------
T ss_pred hhhhccCCCHHHhccCCCCCCCC--CCCCCCHHHHHHHHHHHHH-HhhCeEEeCCEEEEEEeCCCeEE-EEEee------
Confidence 00 0000011111 12222211 1112244566666665554 45788999999999988776432 33321
Q ss_pred cCCCCCCC-ceEEEcCeEEEcCCCCCC
Q 020815 218 HDTQSCMD-PNVMEAKVVVSSCGHDGP 243 (321)
Q Consensus 218 ~~~~~~g~-~~~i~a~~VI~AtG~~~~ 243 (321)
.. +|+ ..++.+|.||+|+|.++.
T Consensus 155 ~~---~G~~~~~~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 155 TK---AGSPISKDIFDAVSICNGHYEV 178 (447)
T ss_dssp SS---TTCCEEEEEESEEEECCCSSSS
T ss_pred cC---CCCeeEEEEeCEEEECCCCCCC
Confidence 00 012 237999999999998653
No 73
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.29 E-value=5.4e-12 Score=118.14 Aligned_cols=136 Identities=20% Similarity=0.271 Sum_probs=81.1
Q ss_pred cccEEEECCChHHHHHHHHhhcC-CCCeEEEEeccCCCCCcccc-Cc-cc-chhhhcc------chHHHHHHH-cCC---
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWL-GG-QL-FSAMVVR------KPAHIFLDE-LGI--- 155 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~-~G~~V~liEk~~~~gg~~~~-~g-~~-~~~~~~~------~~~~~~l~~-~g~--- 155 (321)
++||+|||||++|+++|++|++. ||++|+|||+....++.++. ++ .+ ....... ....+.+.+ .+.
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 115 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTREQLLGALGSGKT 115 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHHHHHHTGGGSSCC
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCCcceeecccCCchHHHHHHHHHHHHHHHhCCCCC
Confidence 58999999999999999999984 48999999998655554333 22 12 1111000 011122221 111
Q ss_pred -CcccCC---------------------------------C--e------EEEecHHHHHHHHHHHHHcCCCcEEEcCce
Q 020815 156 -DYDEQD---------------------------------N--Y------VVIKHAALFTSTIMSKLLARPNVKLFNAVA 193 (321)
Q Consensus 156 -~~~~~~---------------------------------~--~------~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~ 193 (321)
.+...+ . . ....+...+...|.+.+. +.|++++++++
T Consensus 116 ~~~~~~g~l~~~~~~~~~g~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~~~L~~~~~-~~Gv~i~~~~~ 194 (405)
T 3c4n_A 116 LEVEDRPLLHLLPAGEGSGLTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQAI-GQGAGLLLNTR 194 (405)
T ss_dssp CCEEECCEEEEESSCCSSSCEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHHH-TTTCEEECSCE
T ss_pred CcEEeeCeEEehhhHhHCCCCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHHHHHHHHHH-HCCCEEEcCCE
Confidence 111100 0 0 012244668888888887 67999999999
Q ss_pred EE---------EEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 194 AE---------DLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 194 v~---------~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
|+ ++..+++++ +|.+. ..+++||.||+|+|.++
T Consensus 195 v~~~~g~~~~~~i~~~~~~v-~v~~~---------------~g~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 195 AELVPGGVRLHRLTVTNTHQ-IVVHE---------------TRQIRAGVIIVAAGAAG 236 (405)
T ss_dssp EEEETTEEEEECBCC--------CBC---------------CEEEEEEEEEECCGGGH
T ss_pred EEeccccccccceEeeCCeE-EEEEC---------------CcEEECCEEEECCCccH
Confidence 99 887666655 44431 14799999999999543
No 74
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.29 E-value=8.9e-12 Score=120.45 Aligned_cols=137 Identities=16% Similarity=0.184 Sum_probs=87.1
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC--------CCCCccccCcccchhhhccc----hHHHHHHHcCCC
Q 020815 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV--------SPGGGAWLGGQLFSAMVVRK----PAHIFLDELGID 156 (321)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~--------~~gg~~~~~g~~~~~~~~~~----~~~~~l~~~g~~ 156 (321)
.+|||+|||||++|+++|+.|++. |++|+|||+.+ ..||.|.+.||++.+.+... ...+.+..+|+.
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~-G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~ 109 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQY-GKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWK 109 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCcc
Confidence 469999999999999999999999 99999999954 67888888888887765443 233456677776
Q ss_pred cccCCCeEE--E-ecHHHHHHHH---HHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEE
Q 020815 157 YDEQDNYVV--I-KHAALFTSTI---MSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVME 230 (321)
Q Consensus 157 ~~~~~~~~~--~-~~~~~~~~~l---~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~ 230 (321)
+.......+ . .....+...+ ++...+..+++++.+. +.. .+.+.+. |.. .+++..+++
T Consensus 110 ~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~-a~~--~d~~~v~-v~~------------~~g~~~~i~ 173 (519)
T 3qfa_A 110 VEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAY-GQF--IGPHRIK-ATN------------NKGKEKIYS 173 (519)
T ss_dssp CCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSE-EEE--EETTEEE-EEC------------TTCCCCEEE
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEE--eeCCEEE-EEc------------CCCCEEEEE
Confidence 543211111 0 0111122111 1222335789998873 332 2444322 211 112345899
Q ss_pred cCeEEEcCCCCC
Q 020815 231 AKVVVSSCGHDG 242 (321)
Q Consensus 231 a~~VI~AtG~~~ 242 (321)
+|+||+|||...
T Consensus 174 ~d~lViATGs~p 185 (519)
T 3qfa_A 174 AERFLIATGERP 185 (519)
T ss_dssp EEEEEECCCEEE
T ss_pred CCEEEEECCCCc
Confidence 999999999654
No 75
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.28 E-value=1.7e-11 Score=119.16 Aligned_cols=134 Identities=16% Similarity=0.215 Sum_probs=82.4
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccch-HHHHHHHcCC--CcccCCCeEE
Q 020815 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKP-AHIFLDELGI--DYDEQDNYVV 165 (321)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~-~~~~l~~~g~--~~~~~~~~~~ 165 (321)
.++||||||||++|+.+|+.|++. |++|+|||+++.+||.+.. ...+...+.... ...+.-.... .+.....
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~-g~~v~iiE~~~~~GGtw~~-~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~--- 82 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQA-GMKVLGIEAGEDVGGTWYW-NRYPGCRLDTESYAYGYFALKGIIPEWEWSEN--- 82 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCTHHHH-CCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBS---
T ss_pred CCCCEEEECccHHHHHHHHHHHhC-CCCEEEEeCCCCCCCcccc-CCCCceeecCchhhcccccCcccccCCCcccc---
Confidence 368999999999999999999998 9999999999888886432 222211111110 0011101000 0111111
Q ss_pred EecHHHHHHHHHHHHHcCCCc--EEEcCceEEEEEEECC-EEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 166 IKHAALFTSTIMSKLLARPNV--KLFNAVAAEDLIVKGG-RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 166 ~~~~~~~~~~l~~~~~~~~gv--~i~~~~~v~~l~~~~~-~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
.....++...+.+.+. +.++ .++++++|+++..+++ ....|.+. ++.++++|+||+|+|..+
T Consensus 83 ~~~~~ei~~yl~~~~~-~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~--------------~G~~~~ad~lV~AtG~~s 147 (545)
T 3uox_A 83 FASQPEMLRYVNRAAD-AMDVRKHYRFNTRVTAARYVENDRLWEVTLD--------------NEEVVTCRFLISATGPLS 147 (545)
T ss_dssp SCBHHHHHHHHHHHHH-HHTCGGGEECSCCEEEEEEEGGGTEEEEEET--------------TTEEEEEEEEEECCCSCB
T ss_pred CCCHHHHHHHHHHHHH-HcCCcCcEEECCEEEEEEEeCCCCEEEEEEC--------------CCCEEEeCEEEECcCCCC
Confidence 1234555555444443 4555 7889999999988754 23344442 236899999999999654
No 76
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.27 E-value=1.2e-11 Score=118.52 Aligned_cols=136 Identities=21% Similarity=0.241 Sum_probs=85.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEec--------cCCCCCccccCcccchhhhccch----HHHHHHHcCCCc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQ--------SVSPGGGAWLGGQLFSAMVVRKP----AHIFLDELGIDY 157 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk--------~~~~gg~~~~~g~~~~~~~~~~~----~~~~l~~~g~~~ 157 (321)
+|||+|||||++|+++|+.|++. |++|+|||| ....||.|.+.||++.+.+.... ..+.+..+|+.+
T Consensus 6 ~~DvvVIG~G~aGl~aA~~la~~-G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 84 (488)
T 3dgz_A 6 SFDLLVIGGGSGGLACAKEAAQL-GKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEV 84 (488)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCccc
Confidence 69999999999999999999999 999999997 45689999888888877664432 234556777765
Q ss_pred ccCC--CeEE-EecHHHHHHHH---HHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEc
Q 020815 158 DEQD--NYVV-IKHAALFTSTI---MSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEA 231 (321)
Q Consensus 158 ~~~~--~~~~-~~~~~~~~~~l---~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a 231 (321)
.... ++.. ......+...+ +....+..+++++.+. +.. .+.+.+ .|.. .+++..++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~-~~~--~~~~~v-~v~~------------~~g~~~~~~~ 148 (488)
T 3dgz_A 85 AQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIK-ASF--VDEHTV-RGVD------------KGGKATLLSA 148 (488)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCE-EEE--SSSSEE-EEEC------------TTSCEEEEEE
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEE--ccCCeE-EEEe------------CCCceEEEEC
Confidence 4321 1110 01111122211 1222335789988773 322 123322 2221 1123368999
Q ss_pred CeEEEcCCCCC
Q 020815 232 KVVVSSCGHDG 242 (321)
Q Consensus 232 ~~VI~AtG~~~ 242 (321)
|+||+|||...
T Consensus 149 d~lViATGs~p 159 (488)
T 3dgz_A 149 EHIVIATGGRP 159 (488)
T ss_dssp EEEEECCCEEE
T ss_pred CEEEEcCCCCC
Confidence 99999999654
No 77
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.27 E-value=8.3e-12 Score=112.18 Aligned_cols=118 Identities=18% Similarity=0.245 Sum_probs=75.8
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecH
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 169 (321)
.|||+|||||+||++||++|++. |++|+|||+. ..||.+. +|+++........ .+++ .....
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~-g~~v~liE~~-~~gg~~~-~G~~~~~~~i~~~-------~g~~--------~~i~~ 65 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRS-SLKPVMYEGF-MAGGVAA-GGQLTTTTIIENF-------PGFP--------NGIDG 65 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCCEEECCS-SGGGCCT-TCGGGGSSEECCS-------TTCT--------TCEEH
T ss_pred CCcEEEECCCHHHHHHHHHHHHC-CCCEEEEecC-CCCCccc-CCCcCChHHhhhc-------cCCc--------ccCCH
Confidence 49999999999999999999999 9999999997 3555554 3555443222110 0111 01234
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
.++...+.+.+. +.++++... .+.....+.+... +.+. +..++.+|.||+|||...
T Consensus 66 ~~l~~~~~~~~~-~~~~~~~~~-~v~~~~~~~~~~~-~~~~--------------~~~~~~~~~liiATG~~~ 121 (314)
T 4a5l_A 66 NELMMNMRTQSE-KYGTTIITE-TIDHVDFSTQPFK-LFTE--------------EGKEVLTKSVIIATGATA 121 (314)
T ss_dssp HHHHHHHHHHHH-HTTCEEECC-CEEEEECSSSSEE-EEET--------------TCCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHh-hcCcEEEEe-EEEEeecCCCceE-EEEC--------------CCeEEEEeEEEEcccccc
Confidence 566666666665 578888776 4444443333221 2221 237899999999999643
No 78
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.26 E-value=7.6e-11 Score=114.05 Aligned_cols=65 Identities=12% Similarity=0.212 Sum_probs=48.5
Q ss_pred EEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEEC-CEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCC
Q 020815 165 VIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (321)
Q Consensus 165 ~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~-~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~ 243 (321)
...+...+.+.|.+.+.+..|++++++ +|+++..++ +.+..|.+.+ +.+++||+||+|+|..+.
T Consensus 170 ~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~--------------g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 170 YHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQ--------------NGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp EEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESS--------------SCEEECSEEEECSGGGCC
T ss_pred EEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECC--------------CCEEEcCEEEECCCcchH
Confidence 345667788888888874379999999 699998764 4455665532 145999999999998765
Q ss_pred C
Q 020815 244 F 244 (321)
Q Consensus 244 ~ 244 (321)
.
T Consensus 235 ~ 235 (526)
T 2pyx_A 235 L 235 (526)
T ss_dssp C
T ss_pred H
Confidence 4
No 79
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.26 E-value=2e-11 Score=110.24 Aligned_cols=116 Identities=18% Similarity=0.209 Sum_probs=80.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecH
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 169 (321)
.+||+|||||++|+++|+.|++. |++|+|||+.+.+||.++. ......+. ....+. ....
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~~~gG~~~~--~~~~~~~~----------------~~~~~~-~~~~ 66 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMR-QASVKIIESLPQLGGQLSA--LYPEKYIY----------------DVAGFP-KIRA 66 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCHHHHH--HCTTSEEC----------------CSTTCS-SEEH
T ss_pred cceEEEECCCHHHHHHHHHHHHC-CCCEEEEEcCCCCCceehh--cCCCceEe----------------ccCCCC-CCCH
Confidence 58999999999999999999999 9999999999887765421 00000000 000111 0134
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
.++...+.+.+. +.+++++.+++|+++..+++....|.+.+ .++.+|+||+|+|..
T Consensus 67 ~~~~~~~~~~~~-~~~~~~~~~~~v~~i~~~~~~~~~v~~~~---------------g~~~~d~vVlAtG~~ 122 (332)
T 3lzw_A 67 QELINNLKEQMA-KFDQTICLEQAVESVEKQADGVFKLVTNE---------------ETHYSKTVIITAGNG 122 (332)
T ss_dssp HHHHHHHHHHHT-TSCCEEECSCCEEEEEECTTSCEEEEESS---------------EEEEEEEEEECCTTS
T ss_pred HHHHHHHHHHHH-HhCCcEEccCEEEEEEECCCCcEEEEECC---------------CEEEeCEEEECCCCC
Confidence 667777766665 67999999999999987765233344421 349999999999973
No 80
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.26 E-value=5e-11 Score=114.41 Aligned_cols=47 Identities=26% Similarity=0.386 Sum_probs=41.4
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccch
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFS 138 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~ 138 (321)
+|||+|||||++|+++|+.|++. |++|+|||++ .+||.|++.||++.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~-G~~V~liE~~-~~GGtc~~~gciPs 54 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKH-TDKVVLIEGG-AYGTTCARVGCMPS 54 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT-CSCEEEEESS-CSSCHHHHHSHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCcEEEEeCC-CCCCcccccChhcC
Confidence 58999999999999999999999 9999999997 58998876665543
No 81
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=99.25 E-value=2.4e-11 Score=118.56 Aligned_cols=57 Identities=18% Similarity=0.181 Sum_probs=44.6
Q ss_pred HHHHHcCCCcEEEcCceEEEEEEE----CCEEEEEEEeecceecccCCCCCCCceEEEcC-eEEEcCCCCCC
Q 020815 177 MSKLLARPNVKLFNAVAAEDLIVK----GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAK-VVVSSCGHDGP 243 (321)
Q Consensus 177 ~~~~~~~~gv~i~~~~~v~~l~~~----~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~-~VI~AtG~~~~ 243 (321)
+..+.++.|++|+.++.|++|+.+ +++++||+... .+|...+++|+ -||+|+|++++
T Consensus 233 L~p~~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~----------~~G~~~~v~A~kEVILsAGa~~S 294 (583)
T 3qvp_A 233 LLPNYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGT----------HKGNTHNVYAKHEVLLAAGSAVS 294 (583)
T ss_dssp TTTTTTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEES----------STTCEEEEEEEEEEEECSCTTTH
T ss_pred HHHhhcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEe----------cCCcEEEEEECCEEEEeCCccCC
Confidence 333445789999999999999998 78999998852 12345788996 69999998874
No 82
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.25 E-value=5.2e-11 Score=118.29 Aligned_cols=104 Identities=21% Similarity=0.294 Sum_probs=67.8
Q ss_pred cccEEEECCChHHHHHHHHhhc-----CCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCC--------
Q 020815 90 DTDVVVVGAGSAGLSCAYELSK-----NPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGID-------- 156 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~-----~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~-------- 156 (321)
++||+|||||++|+++|+.|++ . |++|+||||.+.+..... + ........+.|+++|+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~-Gi~v~viE~~~~~~~~gr-a------~~l~~~tle~l~~lGl~~~l~~~~~ 79 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKP-DLKVRIIDKRSTKVYNGQ-A------DGLQCRTLESLKNLGLADKILSEAN 79 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHST-TCCEEEECSSSSCCCSCS-C------CEECHHHHHHHHTTTCHHHHHTTCB
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccC-CCCEEEEeCCCCCCCCCc-e------eEEChHHHHHHHHCCCHHHHHHhcc
Confidence 5899999999999999999999 9 999999999764321100 0 11122233344444331
Q ss_pred -c------ccC-------------------CCeEEEecHHHHHHHHHHHHHcCC--CcEEEcCceEEEEEEEC
Q 020815 157 -Y------DEQ-------------------DNYVVIKHAALFTSTIMSKLLARP--NVKLFNAVAAEDLIVKG 201 (321)
Q Consensus 157 -~------~~~-------------------~~~~~~~~~~~~~~~l~~~~~~~~--gv~i~~~~~v~~l~~~~ 201 (321)
+ +.. .......+...+.+.|++.+.+.. +++++++++++++..++
T Consensus 80 ~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~ 152 (665)
T 1pn0_A 80 DMSTIALYNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDS 152 (665)
T ss_dssp CCCEEEEEEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECG
T ss_pred ccceEEEEeCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecC
Confidence 0 000 001223456677788888876432 48999999999998864
No 83
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.25 E-value=3e-11 Score=110.92 Aligned_cols=118 Identities=20% Similarity=0.227 Sum_probs=81.4
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecH
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 169 (321)
.+||+|||||++|+++|+.|++. |++|+|||+.+.+||.+... ...... ++ ...+. ....
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~~~gg~~~~~--~~~~~~---------------~~-~~~~~-~~~~ 73 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMN-NISCRIIESMPQLGGQLAAL--YPEKHI---------------YD-VAGFP-EVPA 73 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCHHHHHT--CTTSEE---------------CC-STTCS-SEEH
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCCEEEEecCCCCCCccccc--CCCccc---------------cc-CCCCC-CCCH
Confidence 58999999999999999999999 99999999988777654210 000000 00 00010 0134
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
..+...+.+.+. +.+++++.+++|+.+..+++....|.+. ++.++.+|+||+|+|..+
T Consensus 74 ~~~~~~l~~~~~-~~~~~~~~~~~v~~i~~~~~~~~~v~~~--------------~g~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 74 IDLVESLWAQAE-RYNPDVVLNETVTKYTKLDDGTFETRTN--------------TGNVYRSRAVLIAAGLGA 131 (360)
T ss_dssp HHHHHHHHHHHH-TTCCEEECSCCEEEEEECTTSCEEEEET--------------TSCEEEEEEEEECCTTCS
T ss_pred HHHHHHHHHHHH-HhCCEEEcCCEEEEEEECCCceEEEEEC--------------CCcEEEeeEEEEccCCCc
Confidence 567777777776 6789999999999998765422233332 125799999999999854
No 84
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.25 E-value=2.6e-11 Score=117.45 Aligned_cols=138 Identities=15% Similarity=0.217 Sum_probs=85.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC--------CCCCccccCcccchhhhccchHH-HHHH----HcCCC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV--------SPGGGAWLGGQLFSAMVVRKPAH-IFLD----ELGID 156 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~--------~~gg~~~~~g~~~~~~~~~~~~~-~~l~----~~g~~ 156 (321)
+|||||||+|++|+.+|.++++. |+||+|||+.. ..||+|.+.||++++.+...... +.++ .+|+.
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~-G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~ 120 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAH-GARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWK 120 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTT-TCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCcc
Confidence 69999999999999999999999 99999999743 47999999999999877664322 2222 24544
Q ss_pred cccC-CCeEE-EecHHHHHHHH---HHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEc
Q 020815 157 YDEQ-DNYVV-IKHAALFTSTI---MSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEA 231 (321)
Q Consensus 157 ~~~~-~~~~~-~~~~~~~~~~l---~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a 231 (321)
+... .+|.. ..+.....+.+ +....++.+|+++.+. .-..+.+.+.. .... ..+...++++
T Consensus 121 ~~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~---a~f~~~~~v~V-~~~~----------~~~~~~~i~a 186 (542)
T 4b1b_A 121 FDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGL---AKLKDKNTVSY-YLKG----------DLSKEETVTG 186 (542)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEE---EEEEETTEEEE-EEC------------CCCEEEEEE
T ss_pred cCcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeee---EEEcCCCcceE-eecc----------cCCceEEEee
Confidence 3211 00100 00111111111 1222336789998773 22334554432 2110 1113478999
Q ss_pred CeEEEcCCCCC
Q 020815 232 KVVVSSCGHDG 242 (321)
Q Consensus 232 ~~VI~AtG~~~ 242 (321)
+.+|+|||...
T Consensus 187 ~~iiIATGs~P 197 (542)
T 4b1b_A 187 KYILIATGCRP 197 (542)
T ss_dssp EEEEECCCEEE
T ss_pred eeEEeccCCCC
Confidence 99999999754
No 85
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.25 E-value=3.2e-11 Score=114.08 Aligned_cols=58 Identities=10% Similarity=0.036 Sum_probs=46.0
Q ss_pred cHHHHHHHHHHHHHcCCCcEEEcCceEEEEEE---------------ECCEEEEEEEeecceecccCCCCCCCceEE--E
Q 020815 168 HAALFTSTIMSKLLARPNVKLFNAVAAEDLIV---------------KGGRVGGVVTNWALVSMNHDTQSCMDPNVM--E 230 (321)
Q Consensus 168 ~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~---------------~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i--~ 230 (321)
+...+...|.+.+. +.|++++++++|++|.. +++++.+|.+.. .++ +
T Consensus 179 ~~~~l~~~L~~~~~-~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~---------------g~i~~~ 242 (448)
T 3axb_A 179 DAEKVVDYYYRRAS-GAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSD---------------GTRVEV 242 (448)
T ss_dssp CHHHHHHHHHHHHH-HTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETT---------------SCEEEE
T ss_pred cHHHHHHHHHHHHH-hCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCC---------------CEEeec
Confidence 45678888888887 57999999999999988 566676776631 257 9
Q ss_pred cCeEEEcCCCC
Q 020815 231 AKVVVSSCGHD 241 (321)
Q Consensus 231 a~~VI~AtG~~ 241 (321)
||.||+|+|.+
T Consensus 243 Ad~VV~AtG~~ 253 (448)
T 3axb_A 243 GEKLVVAAGVW 253 (448)
T ss_dssp EEEEEECCGGG
T ss_pred CCEEEECCCcC
Confidence 99999999954
No 86
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.24 E-value=2.1e-11 Score=115.84 Aligned_cols=137 Identities=15% Similarity=0.156 Sum_probs=82.6
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCC-----CeEEEEeccCCCCCccccCcccchhhhc----------------cchHH
Q 020815 89 ADTDVVVVGAGSAGLSCAYELSKNPN-----IQIAIIEQSVSPGGGAWLGGQLFSAMVV----------------RKPAH 147 (321)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G-----~~V~liEk~~~~gg~~~~~g~~~~~~~~----------------~~~~~ 147 (321)
..|||+|||||++|+++|+.|++. | .+|+|||+.+..| |..+.++..... .....
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~-g~~~~~~~v~liE~~~~~g---~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~ 104 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQER-AQAQGALEVLFLDKQGDYR---WHGNTLVSQSELQISFLKDLVSLRNPTSPYSFV 104 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHH-HHHHCCCCEEEEESCSSCC---SSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhc-ccccCcccEEEEecCCCCC---CcCCCCCCCCcCCcchhhccccccCCCCCCChh
Confidence 358999999999999999999998 8 9999999998766 333222110000 00122
Q ss_pred HHHHHcCCCcc--cCCCeEEEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEE--CCEEEE--EEEeecceecccCCC
Q 020815 148 IFLDELGIDYD--EQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK--GGRVGG--VVTNWALVSMNHDTQ 221 (321)
Q Consensus 148 ~~l~~~g~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~--~~~v~g--v~~~~~~~~~~~~~~ 221 (321)
.|+.+.+..+. ....+ ......+...+... .++.+++++++++|+++..+ +++... |.+.++
T Consensus 105 ~~l~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~-~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g--------- 172 (463)
T 3s5w_A 105 NYLHKHDRLVDFINLGTF--YPCRMEFNDYLRWV-ASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNA--------- 172 (463)
T ss_dssp HHHHHTTCHHHHHHHCCS--CCBHHHHHHHHHHH-HTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEET---------
T ss_pred HhhhhcCceeecccccCC--CCCHHHHHHHHHHH-HHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecC---------
Confidence 33333331110 00010 11334555554444 44678999999999999876 244432 333221
Q ss_pred CCCCceEEEcCeEEEcCCCCC
Q 020815 222 SCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 222 ~~g~~~~i~a~~VI~AtG~~~ 242 (321)
.++..++.+|.||+|||+..
T Consensus 173 -~g~~~~~~~d~lVlAtG~~p 192 (463)
T 3s5w_A 173 -DGEELVRTTRALVVSPGGTP 192 (463)
T ss_dssp -TSCEEEEEESEEEECCCCEE
T ss_pred -CCceEEEEeCEEEECCCCCC
Confidence 11234899999999999743
No 87
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.24 E-value=5.7e-11 Score=106.73 Aligned_cols=111 Identities=19% Similarity=0.214 Sum_probs=77.2
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecH
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 169 (321)
.+||+|||||++|+++|+.|++. |.+|+|||+. +||.+........ ++ .... ...
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~--~gg~~~~~~~~~~----------------~~--~~~~----~~~ 69 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARY-MLKTLVIGET--PGGQLTEAGIVDD----------------YL--GLIE----IQA 69 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESS--TTGGGGGCCEECC----------------ST--TSTT----EEH
T ss_pred ccCEEEECccHHHHHHHHHHHHC-CCcEEEEecc--CCCeecccccccc----------------cC--CCCC----CCH
Confidence 58999999999999999999999 9999999998 6665432211110 00 0000 234
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
..+...+.+.+. +.|++++. ++|+++..+++.+ .+.+. +..++.+|.||+|+|...
T Consensus 70 ~~~~~~~~~~~~-~~~v~~~~-~~v~~i~~~~~~~-~v~~~--------------~g~~~~~d~lvlAtG~~~ 125 (323)
T 3f8d_A 70 SDMIKVFNKHIE-KYEVPVLL-DIVEKIENRGDEF-VVKTK--------------RKGEFKADSVILGIGVKR 125 (323)
T ss_dssp HHHHHHHHHHHH-TTTCCEEE-SCEEEEEEC--CE-EEEES--------------SSCEEEEEEEEECCCCEE
T ss_pred HHHHHHHHHHHH-HcCCEEEE-EEEEEEEecCCEE-EEEEC--------------CCCEEEcCEEEECcCCCC
Confidence 567777777665 67999999 7999988765532 23332 225899999999999753
No 88
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.23 E-value=8.6e-11 Score=114.00 Aligned_cols=64 Identities=16% Similarity=0.191 Sum_probs=48.5
Q ss_pred EEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEEC-CEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCC
Q 020815 165 VIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (321)
Q Consensus 165 ~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~-~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~ 243 (321)
...+...+...|.+.+. +.|++++.+ +|+++..++ +.+.+|.+.+ +.+++||.||+|+|..+.
T Consensus 160 ~~i~~~~l~~~L~~~a~-~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~--------------g~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 160 WHFDAHLVADFLKRWAV-ERGVNRVVD-EVVDVRLNNRGYISNLLTKE--------------GRTLEADLFIDCSGMRGL 223 (538)
T ss_dssp EEECHHHHHHHHHHHHH-HTTCEEEEC-CEEEEEECTTSCEEEEEETT--------------SCEECCSEEEECCGGGCC
T ss_pred EEEeHHHHHHHHHHHHH-HCCCEEEEe-eEeEEEEcCCCcEEEEEECC--------------CcEEEeCEEEECCCCchh
Confidence 34556778888888887 479999999 899998754 4456666532 257999999999997765
Q ss_pred C
Q 020815 244 F 244 (321)
Q Consensus 244 ~ 244 (321)
.
T Consensus 224 ~ 224 (538)
T 2aqj_A 224 L 224 (538)
T ss_dssp C
T ss_pred h
Confidence 4
No 89
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.23 E-value=6.5e-11 Score=115.07 Aligned_cols=130 Identities=18% Similarity=0.158 Sum_probs=83.8
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccC---cc---cchhhhccchHHHHHHHcCCCcccCCCe
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLG---GQ---LFSAMVVRKPAHIFLDELGIDYDEQDNY 163 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~---g~---~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 163 (321)
++||||||||++|+.+|+.|++. |++|+|||+++.+||.+... ++ ............+.+..+... ..
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~-G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~----~~- 94 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQ-GLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWS----EK- 94 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCS----SS-
T ss_pred CCCEEEECchHHHHHHHHHHHhC-CCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCc----cC-
Confidence 58999999999999999999998 99999999998888865422 11 111111111001112222211 11
Q ss_pred EEEecHHHHHHHHHHHHHcCCCc--EEEcCceEEEEEEECC-EEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCC
Q 020815 164 VVIKHAALFTSTIMSKLLARPNV--KLFNAVAAEDLIVKGG-RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGH 240 (321)
Q Consensus 164 ~~~~~~~~~~~~l~~~~~~~~gv--~i~~~~~v~~l~~~~~-~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~ 240 (321)
.....++...+.+.+. +.++ +++++++|+++..+++ ....|.+. ++.++++|+||+|+|.
T Consensus 95 --~~~~~ei~~yl~~~~~-~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~--------------~G~~i~ad~lV~AtG~ 157 (549)
T 4ap3_A 95 --YATQPEILAYLEHVAD-RFDLRRDIRFDTRVTSAVLDEEGLRWTVRTD--------------RGDEVSARFLVVAAGP 157 (549)
T ss_dssp --SCBHHHHHHHHHHHHH-HTTCGGGEECSCCEEEEEEETTTTEEEEEET--------------TCCEEEEEEEEECCCS
T ss_pred --CCCHHHHHHHHHHHHH-HcCCCccEEECCEEEEEEEcCCCCEEEEEEC--------------CCCEEEeCEEEECcCC
Confidence 1244566666555554 5676 8999999999988765 23334442 2257999999999995
Q ss_pred CC
Q 020815 241 DG 242 (321)
Q Consensus 241 ~~ 242 (321)
.+
T Consensus 158 ~s 159 (549)
T 4ap3_A 158 LS 159 (549)
T ss_dssp EE
T ss_pred CC
Confidence 43
No 90
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.22 E-value=7.3e-11 Score=113.68 Aligned_cols=64 Identities=14% Similarity=0.142 Sum_probs=49.7
Q ss_pred EEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEE-CCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCC
Q 020815 165 VIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (321)
Q Consensus 165 ~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~-~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~ 243 (321)
...+...+...|.+.+. +.|++++++ +|+++..+ ++.+.+|.+.+ +.+++||.||+|+|..+.
T Consensus 168 ~~~~~~~l~~~L~~~a~-~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~--------------g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 168 YHFDADEVARYLSEYAI-ARGVRHVVD-DVQHVGQDERGWISGVHTKQ--------------HGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp EEECHHHHHHHHHHHHH-HTTCEEEEC-CEEEEEECTTSCEEEEEESS--------------SCEEECSEEEECCGGGCC
T ss_pred EEEcHHHHHHHHHHHHH-HCCCEEEEC-eEeEEEEcCCCCEEEEEECC--------------CCEEEcCEEEECCCcchH
Confidence 44567888888888887 479999999 99999875 45566676632 247999999999997765
Q ss_pred C
Q 020815 244 F 244 (321)
Q Consensus 244 ~ 244 (321)
.
T Consensus 232 ~ 232 (511)
T 2weu_A 232 L 232 (511)
T ss_dssp C
T ss_pred H
Confidence 4
No 91
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.21 E-value=5.8e-11 Score=107.65 Aligned_cols=132 Identities=13% Similarity=0.126 Sum_probs=76.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccC---cccchh---hh-c-cchHHHHHH---HcCCC--
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLG---GQLFSA---MV-V-RKPAHIFLD---ELGID-- 156 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~---g~~~~~---~~-~-~~~~~~~l~---~~g~~-- 156 (321)
.+||+|||||++|+++|+.|++. |++|+||||...+||..... +..++. .+ . .....+.++ ..+..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~-G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAA-GHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAE 80 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEE
T ss_pred CceEEEECCcHHHHHHHHHHHHC-CCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeee
Confidence 47999999999999999999999 99999999998777653211 100000 00 0 111122222 21210
Q ss_pred cc--------------cCCCeEEEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCC
Q 020815 157 YD--------------EQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQS 222 (321)
Q Consensus 157 ~~--------------~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~ 222 (321)
+. ......+.. ..-...+.+.+.+ +++++++++|+++..+++.+. |.+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~l~~--g~~i~~~~~v~~i~~~~~~~~-v~~~~----------- 144 (336)
T 1yvv_A 81 WTPLLYNFHAGRLSPSPDEQVRWVG--KPGMSAITRAMRG--DMPVSFSCRITEVFRGEEHWN-LLDAE----------- 144 (336)
T ss_dssp ECCCEEEESSSBCCCCCTTSCEEEE--SSCTHHHHHHHHT--TCCEECSCCEEEEEECSSCEE-EEETT-----------
T ss_pred ccccceeccCcccccCCCCCccEEc--CccHHHHHHHHHc--cCcEEecCEEEEEEEeCCEEE-EEeCC-----------
Confidence 00 000001111 0112344555542 899999999999998776543 33321
Q ss_pred CCCceEEEcCeEEEcCCC
Q 020815 223 CMDPNVMEAKVVVSSCGH 240 (321)
Q Consensus 223 ~g~~~~i~a~~VI~AtG~ 240 (321)
| ....++++||+|+|.
T Consensus 145 -g-~~~~~a~~vV~a~g~ 160 (336)
T 1yvv_A 145 -G-QNHGPFSHVIIATPA 160 (336)
T ss_dssp -S-CEEEEESEEEECSCH
T ss_pred -C-cCccccCEEEEcCCH
Confidence 1 133359999999994
No 92
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.21 E-value=1.3e-10 Score=107.98 Aligned_cols=34 Identities=32% Similarity=0.509 Sum_probs=31.9
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSP 126 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~ 126 (321)
+|+|||||++||++|+.|++. |++|+|+||.+.+
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~-G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKH-GIKVTIYERNSAA 36 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCSS
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCCEEEEecCCCC
Confidence 799999999999999999999 9999999997654
No 93
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.21 E-value=5.1e-11 Score=114.31 Aligned_cols=134 Identities=24% Similarity=0.383 Sum_probs=82.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchH-HHH----HHHcCCCcccC-CCe
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPA-HIF----LDELGIDYDEQ-DNY 163 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~-~~~----l~~~g~~~~~~-~~~ 163 (321)
+|||+|||||++|+++|+.|++. |++|+|||+.+.+||.|++.++++.+.+..... ... +..+|+..... .++
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~-G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 103 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQL-GMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPKLNL 103 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCccCH
Confidence 58999999999999999999999 999999999889999998888887766544321 122 23344432211 000
Q ss_pred EEE-ecHH----HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcC
Q 020815 164 VVI-KHAA----LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSC 238 (321)
Q Consensus 164 ~~~-~~~~----~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~At 238 (321)
... .... .+... ++...+..+++++.+.... .+.+.+ .|.. .+++..++.+|.||+||
T Consensus 104 ~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~g~~~~---~~~~~~-~v~~------------~~g~~~~~~~d~lViAT 166 (491)
T 3urh_A 104 QKMMAHKDATVKSNVDG-VSFLFKKNKIDGFQGTGKV---LGQGKV-SVTN------------EKGEEQVLEAKNVVIAT 166 (491)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHHHHHTTCEEEESEEEE---CSSSEE-EEEC------------TTSCEEEEECSEEEECC
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHhCCCEEEEEEEEE---ecCCEE-EEEe------------CCCceEEEEeCEEEEcc
Confidence 000 0011 11122 2223335789998884322 233322 2221 11233689999999999
Q ss_pred CCC
Q 020815 239 GHD 241 (321)
Q Consensus 239 G~~ 241 (321)
|..
T Consensus 167 Gs~ 169 (491)
T 3urh_A 167 GSD 169 (491)
T ss_dssp CEE
T ss_pred CCC
Confidence 965
No 94
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.20 E-value=2.1e-10 Score=110.97 Aligned_cols=46 Identities=20% Similarity=0.212 Sum_probs=40.9
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCccc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQL 136 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~ 136 (321)
++||+|||||++|+++|++|++. |.+|+|||++..+||.|.+.+++
T Consensus 43 ~~dVvIIGgG~aGl~aA~~l~~~-G~~V~liE~~~~~GG~~~~~g~~ 88 (523)
T 1mo9_A 43 EYDAIFIGGGAAGRFGSAYLRAM-GGRQLIVDRWPFLGGSCPHNACV 88 (523)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSSSCHHHHHSHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCCCCCcccccCcC
Confidence 68999999999999999999999 99999999997788887655544
No 95
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.20 E-value=3.7e-11 Score=114.06 Aligned_cols=47 Identities=23% Similarity=0.329 Sum_probs=40.8
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccch
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFS 138 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~ 138 (321)
+|||+|||||++|+++|++|++. |.+|+|||++ ..||.|.+.+|++.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~liE~~-~~GG~~~~~gciP~ 50 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMY-GQKCALIEAK-ELGGTCVNVGCVPK 50 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT-TCCEEEEESS-CTTHHHHHHSHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEcCC-CCCCcccccCccCh
Confidence 58999999999999999999998 9999999997 67888766555443
No 96
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.20 E-value=1.5e-10 Score=103.79 Aligned_cols=112 Identities=21% Similarity=0.307 Sum_probs=77.7
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC-eEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 169 (321)
|||+|||||++|+++|+.|++. |. +|+|||+. .+||.+........ + ..+......
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~-g~~~v~lie~~-~~gg~~~~~~~~~~------------------~---~~~~~~~~~ 58 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRG-GVKNAVLFEKG-MPGGQITGSSEIEN------------------Y---PGVKEVVSG 58 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-TCSSEEEECSS-STTCGGGGCSCBCC------------------S---TTCCSCBCH
T ss_pred ceEEEECccHHHHHHHHHHHHC-CCCcEEEEcCC-CCCccccccccccc------------------C---CCCcccCCH
Confidence 7999999999999999999999 99 99999995 56665432211100 0 000011244
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
..+...+.+.+. +.+++++. .+|+++..+++.+. +.+. ++.++++|.||+|+|..+
T Consensus 59 ~~~~~~l~~~~~-~~~v~~~~-~~v~~i~~~~~~~~-v~~~--------------~g~~~~~~~vv~AtG~~~ 114 (311)
T 2q0l_A 59 LDFMQPWQEQCF-RFGLKHEM-TAVQRVSKKDSHFV-ILAE--------------DGKTFEAKSVIIATGGSP 114 (311)
T ss_dssp HHHHHHHHHHHH-TTSCEEEC-SCEEEEEEETTEEE-EEET--------------TSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHH-HcCCEEEE-EEEEEEEEcCCEEE-EEEc--------------CCCEEECCEEEECCCCCC
Confidence 566677666665 67999998 68999988776432 2221 125799999999999654
No 97
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.19 E-value=1.1e-10 Score=109.83 Aligned_cols=40 Identities=33% Similarity=0.583 Sum_probs=37.9
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccc
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAW 131 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~ 131 (321)
|||||||||++|++||+.|++. |.+|+|||+++.+||.++
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~-G~~V~vlE~~~~~GG~~~ 41 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNA-GKKVLLLEGGERLGGRAY 41 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSSSBTTCC
T ss_pred CCEEEECCcHHHHHHHHHHHHc-CCeEEEEecCCCccCeec
Confidence 7999999999999999999999 999999999888988875
No 98
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.19 E-value=9.8e-11 Score=106.18 Aligned_cols=116 Identities=22% Similarity=0.269 Sum_probs=79.9
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecH
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 169 (321)
.+||+|||||++|+++|+.|++. |++|+|||+.+.+||.+... .....+. .. ..+.. ...
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~~~gg~~~~~--~~~~~~~-----------~~-----~~~~~-~~~ 64 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMR-GLSFRFVDPLPEPGGQLTAL--YPEKYIY-----------DV-----AGFPK-VYA 64 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSSCHHHHHT--CTTSEEC-----------CS-----TTCSS-EEH
T ss_pred cCcEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCCCCCCeeecc--CCCceee-----------cc-----CCCCC-CCH
Confidence 58999999999999999999999 99999999988777643211 0000000 00 01111 134
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
..+...+.+.+. +.+++++.+++|+.+..+++.+ .+.+. ++.++.+|+||+|+|..
T Consensus 65 ~~~~~~l~~~~~-~~~~~~~~~~~v~~i~~~~~~~-~v~~~--------------~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 65 KDLVKGLVEQVA-PFNPVYSLGERAETLEREGDLF-KVTTS--------------QGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp HHHHHHHHHHHG-GGCCEEEESCCEEEEEEETTEE-EEEET--------------TSCEEEEEEEEECCTTS
T ss_pred HHHHHHHHHHHH-HcCCEEEeCCEEEEEEECCCEE-EEEEC--------------CCCEEEeCEEEECCCCC
Confidence 566677766665 5689999999999998876632 23331 12579999999999974
No 99
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.19 E-value=1.5e-10 Score=108.55 Aligned_cols=38 Identities=39% Similarity=0.538 Sum_probs=36.0
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCcc
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA 130 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~ 130 (321)
||+|||||++|+++|++|++. |.+|+|+|+++.+||.+
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-G~~V~vlE~~~~~GG~~ 39 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARN-GHEIIVLEKSAMIGGRF 39 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSSSCTTS
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCCCcee
Confidence 899999999999999999999 99999999998888765
No 100
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.19 E-value=7.4e-11 Score=106.66 Aligned_cols=114 Identities=20% Similarity=0.231 Sum_probs=76.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecH
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 169 (321)
.+||+|||||++|+++|+.|++. |++|+|||+. .+||.+........ . .+++. ....
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~-g~~v~lie~~-~~gg~~~~~~~~~~-~------------~~~~~--------~~~~ 64 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRA-QLSTLILEKG-MPGGQIAWSEEVEN-F------------PGFPE--------PIAG 64 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESS-CTTGGGGGCSCBCC-S------------TTCSS--------CBCH
T ss_pred cCCEEEECCCHHHHHHHHHHHHc-CCcEEEEeCC-CCCccccccccccc-C------------CCCCC--------CCCH
Confidence 58999999999999999999999 9999999998 56665432211100 0 01110 1234
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCceEEEEEEE--CCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVK--GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~--~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
..+...+.+.+. +.|++++. .+++++..+ ++....+.+. ++.++++|+||+|||...
T Consensus 65 ~~~~~~l~~~~~-~~gv~~~~-~~v~~i~~~~~~~~~~~v~~~--------------~g~~~~~~~vv~AtG~~~ 123 (325)
T 2q7v_A 65 MELAQRMHQQAE-KFGAKVEM-DEVQGVQHDATSHPYPFTVRG--------------YNGEYRAKAVILATGADP 123 (325)
T ss_dssp HHHHHHHHHHHH-HTTCEEEE-CCEEEEEECTTSSSCCEEEEE--------------SSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHH-HcCCEEEe-eeEEEEEeccCCCceEEEEEC--------------CCCEEEeCEEEECcCCCc
Confidence 566666666665 57999987 488888766 3321122222 125799999999999643
No 101
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.19 E-value=4.6e-11 Score=108.16 Aligned_cols=117 Identities=11% Similarity=0.195 Sum_probs=78.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC----CCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEE
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV----SPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVV 165 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~----~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~ 165 (321)
.+||+|||||++|+++|+.|++. |++|+|||+.+ .+||.......... + ..+..
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~vie~~~~~~~~~gg~~~~~~~~~~------------------~---~~~~~ 79 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARA-EIKPILYEGMMANGIAAGGQLTTTTEIEN------------------F---PGFPD 79 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCCEEECCSSBTTBCTTCGGGGSSEECC------------------S---TTCTT
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCCEEEEecCCCCCCCcCcccccchhhcc------------------c---CCCcc
Confidence 68999999999999999999999 99999999954 45554322110000 0 00000
Q ss_pred EecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 166 IKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 166 ~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
......+...+.+.+. +.+++++.++ |+++..+++.+. +.+. .. .+..++.+|.||+|+|...
T Consensus 80 ~~~~~~~~~~~~~~~~-~~gv~i~~~~-v~~i~~~~~~~~-v~~~------~~-----~~~~~~~~d~vvlAtG~~~ 142 (338)
T 3itj_A 80 GLTGSELMDRMREQST-KFGTEIITET-VSKVDLSSKPFK-LWTE------FN-----EDAEPVTTDAIILATGASA 142 (338)
T ss_dssp CEEHHHHHHHHHHHHH-HTTCEEECSC-EEEEECSSSSEE-EEET------TC-----SSSCCEEEEEEEECCCEEE
T ss_pred cCCHHHHHHHHHHHHH-HcCCEEEEeE-EEEEEEcCCEEE-EEEE------ec-----CCCcEEEeCEEEECcCCCc
Confidence 1234667777777776 5799999997 888877665443 2221 00 1236789999999999743
No 102
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.18 E-value=2.4e-10 Score=111.16 Aligned_cols=65 Identities=18% Similarity=0.195 Sum_probs=49.2
Q ss_pred EEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEEC-CEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCC
Q 020815 165 VIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (321)
Q Consensus 165 ~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~-~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~ 243 (321)
...+...+.+.|.+.+.+..|++++++ +|+++..++ +.+.+|.+.+ +.+++||.||+|+|..+.
T Consensus 189 ~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~--------------G~~i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 189 WHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTAT--------------GRVFDADLFVDCSGFRGL 253 (550)
T ss_dssp EEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETT--------------SCEEECSEEEECCGGGCC
T ss_pred eEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECC--------------CCEEECCEEEECCCCchh
Confidence 345667788888888874339999999 999998754 5566776632 257999999999997765
Q ss_pred C
Q 020815 244 F 244 (321)
Q Consensus 244 ~ 244 (321)
.
T Consensus 254 ~ 254 (550)
T 2e4g_A 254 L 254 (550)
T ss_dssp C
T ss_pred h
Confidence 4
No 103
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.18 E-value=2.9e-10 Score=110.43 Aligned_cols=130 Identities=19% Similarity=0.161 Sum_probs=81.4
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhc-------cchHHHHHHHcCCCcccCCC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVV-------RKPAHIFLDELGIDYDEQDN 162 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~-------~~~~~~~l~~~g~~~~~~~~ 162 (321)
++||+|||||++|+++|+.|++. |++|+|||++..+||.+... +.+...+. .....+.+..+.. .. .
T Consensus 16 ~~dVvIIGaG~aGl~aA~~L~~~-G~~v~iiE~~~~~GG~w~~~-~~pg~~~d~~~~~~~~~f~~~~~~~~~~--~~--~ 89 (542)
T 1w4x_A 16 EVDVLVVGAGFSGLYALYRLREL-GRSVHVIETAGDVGGVWYWN-RYPGARCDIESIEYCYSFSEEVLQEWNW--TE--R 89 (542)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCTHHHHC-CCTTCBCSSCTTTSSCCSCHHHHHHCCC--CB--S
T ss_pred CCCEEEECccHHHHHHHHHHHhC-CCCEEEEeCCCCCCCccccc-CCCceeecccccccccccChhhhhccCc--cc--c
Confidence 58999999999999999999999 99999999998888765321 11110000 0000011122211 11 1
Q ss_pred eEEEecHHHHHHHHHHHHHcCC--CcEEEcCceEEEEEEECC-EEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCC
Q 020815 163 YVVIKHAALFTSTIMSKLLARP--NVKLFNAVAAEDLIVKGG-RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCG 239 (321)
Q Consensus 163 ~~~~~~~~~~~~~l~~~~~~~~--gv~i~~~~~v~~l~~~~~-~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG 239 (321)
.....++.+.+...+. +. +.+++++++|+++..+++ ....|.+. ++.+++||+||+|+|
T Consensus 90 ---~~~~~~i~~yl~~~~~-~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~--------------~G~~~~ad~vV~AtG 151 (542)
T 1w4x_A 90 ---YASQPEILRYINFVAD-KFDLRSGITFHTTVTAAAFDEATNTWTVDTN--------------HGDRIRARYLIMASG 151 (542)
T ss_dssp ---SCBHHHHHHHHHHHHH-HTTGGGGEECSCCEEEEEEETTTTEEEEEET--------------TCCEEEEEEEEECCC
T ss_pred ---cCCHHHHHHHHHHHHH-HcCCCceEEcCcEEEEEEEcCCCCeEEEEEC--------------CCCEEEeCEEEECcC
Confidence 1234455555444333 33 467999999999988753 23334442 125799999999999
Q ss_pred CCCC
Q 020815 240 HDGP 243 (321)
Q Consensus 240 ~~~~ 243 (321)
..+.
T Consensus 152 ~~s~ 155 (542)
T 1w4x_A 152 QLSV 155 (542)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 7654
No 104
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=99.18 E-value=4.7e-11 Score=116.50 Aligned_cols=51 Identities=22% Similarity=0.241 Sum_probs=41.3
Q ss_pred cCCCcEEEcCceEEEEEEE--CCEEEEEEEeecceecccCCCCCCCceEEEc-CeEEEcCCCCC
Q 020815 182 ARPNVKLFNAVAAEDLIVK--GGRVGGVVTNWALVSMNHDTQSCMDPNVMEA-KVVVSSCGHDG 242 (321)
Q Consensus 182 ~~~gv~i~~~~~v~~l~~~--~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a-~~VI~AtG~~~ 242 (321)
++.|++|+.++.|++|+.+ +++++||+... .+|...+++| |-||+|+|+++
T Consensus 217 ~r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~----------~~g~~~~v~A~keVILsaGa~~ 270 (577)
T 3q9t_A 217 NKPNITIVPEVHSKRLIINEADRTCKGVTVVT----------AAGNELNFFADREVILSQGVFE 270 (577)
T ss_dssp SCTTEEEECSEEEEEEEEETTTTEEEEEEEEE----------TTSCEEEEEEEEEEEECSHHHH
T ss_pred cCCCeEEEcCcEEEEEEEeCCCCEEEEEEEEe----------CCCcEEEEEeeeEEEEcccccC
Confidence 4679999999999999999 78999999853 1134567889 57999999764
No 105
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.17 E-value=3e-11 Score=115.61 Aligned_cols=144 Identities=18% Similarity=0.229 Sum_probs=85.0
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccch----HHHHHHHcCCCcccCC-CeE
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKP----AHIFLDELGIDYDEQD-NYV 164 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~----~~~~l~~~g~~~~~~~-~~~ 164 (321)
+|||+|||||++|+++|+.|++. |.+|+|||+.+.+||.|++.++++.+.+.... ..+++..+|+++.... ++.
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~-G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~~~ 84 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADE-GLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDID 84 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCCHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccCHH
Confidence 58999999999999999999999 99999999988899988877776655443321 1233444566543211 110
Q ss_pred E-EecHHH----HHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecce-ecccCCCCCCCceEEEcCeEEEcC
Q 020815 165 V-IKHAAL----FTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALV-SMNHDTQSCMDPNVMEAKVVVSSC 238 (321)
Q Consensus 165 ~-~~~~~~----~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~-~~~~~~~~~g~~~~i~a~~VI~At 238 (321)
. ...... +...+.+.+ ++.|++++.++.+. .+++.+. +...++.. .... .+++..++++|+||+||
T Consensus 85 ~~~~~~~~~~~~l~~~~~~~~-~~~gv~~~~g~~~~---~~~~~v~-v~~~~g~~~~~~~---~~g~~~~i~ad~lViAt 156 (482)
T 1ojt_A 85 MLRAYKDGVVSRLTGGLAGMA-KSRKVDVIQGDGQF---LDPHHLE-VSLTAGDAYEQAA---PTGEKKIVAFKNCIIAA 156 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHTTCEEEEEEEEE---EETTEEE-EEEEEEEETTEEE---EEEEEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HhCCcEEEeeEEEE---ccCCEEE-EEecCCccccccc---ccCcceEEEcCEEEECC
Confidence 0 001111 112223333 35799999886543 3454432 22111000 0000 00122579999999999
Q ss_pred CCCC
Q 020815 239 GHDG 242 (321)
Q Consensus 239 G~~~ 242 (321)
|+..
T Consensus 157 Gs~p 160 (482)
T 1ojt_A 157 GSRV 160 (482)
T ss_dssp CEEE
T ss_pred CCCC
Confidence 9764
No 106
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.17 E-value=3.1e-10 Score=102.25 Aligned_cols=111 Identities=23% Similarity=0.276 Sum_probs=77.1
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecH
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 169 (321)
++||+|||||++|+++|+.|++. |++|+|||+. .+||.+........ + ..+ .....
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~-g~~v~lie~~-~~gg~~~~~~~~~~------------------~---~~~-~~~~~ 71 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARS-GFSVAILDKA-VAGGLTAEAPLVEN------------------Y---LGF-KSIVG 71 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESS-STTGGGGGCSCBCC------------------B---TTB-SSBCH
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-CCcEEEEeCC-CCCccccccchhhh------------------c---CCC-cccCH
Confidence 58999999999999999999999 9999999995 56665432211100 0 000 01233
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
..+...+.+.+. +.+++++. .+++++..+++.+. |.+. ..++.+|+||+|+|...
T Consensus 72 ~~~~~~~~~~~~-~~~v~~~~-~~v~~i~~~~~~~~-v~~~---------------~~~~~~~~li~AtG~~~ 126 (319)
T 3cty_A 72 SELAKLFADHAA-NYAKIREG-VEVRSIKKTQGGFD-IETN---------------DDTYHAKYVIITTGTTH 126 (319)
T ss_dssp HHHHHHHHHHHH-TTSEEEET-CCEEEEEEETTEEE-EEES---------------SSEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHH-HcCCEEEE-eeEEEEEEeCCEEE-EEEC---------------CCEEEeCEEEECCCCCc
Confidence 456666666665 67999988 58999887776433 3331 25789999999999643
No 107
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.17 E-value=1.9e-11 Score=116.49 Aligned_cols=134 Identities=17% Similarity=0.210 Sum_probs=82.1
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccch-HHHHHHHcCCCcccCCCeEEE-e
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKP-AHIFLDELGIDYDEQDNYVVI-K 167 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~-~~~~l~~~g~~~~~~~~~~~~-~ 167 (321)
+|||+|||||++|+++|+.|++. |++|+||||.+.+||.|...++++.+.+.... ..+.+.++.. +....++... .
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~-G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~-~~~~~~~~~~~~ 81 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKA-KYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIAN-VKIPLDFSTVQD 81 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHC-SCCCCCHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhC-CCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhccc-CCCCcCHHHHHH
Confidence 58999999999999999999999 99999999888999999888887766554432 1222222211 0000011000 0
Q ss_pred cHHHHHH----HHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 168 HAALFTS----TIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 168 ~~~~~~~----~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
....+.. ..+....++.+++++.+ ++..+ +.+.+ .|... +++..++.+|+||+|||..
T Consensus 82 ~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~i--d~~~~-~V~~~------------~g~~~~~~~d~lviAtG~~ 143 (466)
T 3l8k_A 82 RKDYVQELRFKQHKRNMSQYETLTFYKG-YVKIK--DPTHV-IVKTD------------EGKEIEAETRYMIIASGAE 143 (466)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTEEEESE-EEEEE--ETTEE-EEEET------------TSCEEEEEEEEEEECCCEE
T ss_pred HHHhheeccccchHHHHHHhCCCEEEEe-EEEEe--cCCeE-EEEcC------------CCcEEEEecCEEEECCCCC
Confidence 1111111 22334445789999888 55544 34432 22221 1122339999999999964
No 108
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.16 E-value=8e-11 Score=112.20 Aligned_cols=140 Identities=16% Similarity=0.186 Sum_probs=82.8
Q ss_pred ccEEEECCChHHHHHHHHhhc---CCCCe---EEEEeccCCCCCccccC---ccc----------chhhhccchHHHHHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSK---NPNIQ---IAIIEQSVSPGGGAWLG---GQL----------FSAMVVRKPAHIFLD 151 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~---~~G~~---V~liEk~~~~gg~~~~~---g~~----------~~~~~~~~~~~~~l~ 151 (321)
+||+|||||++|+++|..|++ . |.+ |+|||+.+.+||.+... ++. +.....+.. ...+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~-G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~-~~~~~ 80 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEK-GAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGP-KECLE 80 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHT-TCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSC-GGGTC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhc-CCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCC-hhhcc
Confidence 699999999999999999999 8 999 99999998888765321 110 000000000 00000
Q ss_pred HcCCCcccC--CCeEEEecHHHHHHHHHHHHHcCCCcE--EEcCceEEEEEEECC--EEEEEEEeecceecccCCCCCCC
Q 020815 152 ELGIDYDEQ--DNYVVIKHAALFTSTIMSKLLARPNVK--LFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMD 225 (321)
Q Consensus 152 ~~g~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~gv~--i~~~~~v~~l~~~~~--~v~gv~~~~~~~~~~~~~~~~g~ 225 (321)
-.++++... .......+...+.+.+.+.+. +.+++ ++++++|+.+..+++ .. .|.+.+. .+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~gv~~~i~~~~~V~~v~~~~~~~~~-~V~~~~~---------~~g~ 149 (464)
T 2xve_A 81 FADYTFDEHFGKPIASYPPREVLWDYIKGRVE-KAGVRKYIRFNTAVRHVEFNEDSQTF-TVTVQDH---------TTDT 149 (464)
T ss_dssp BTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHH-HHTCGGGEECSEEEEEEEEETTTTEE-EEEEEET---------TTTE
T ss_pred cCCCCCCcccCCCCCCCCCHHHHHHHHHHHHH-HcCCcceEEeCCEEEEEEEcCCCCcE-EEEEEEc---------CCCc
Confidence 000111100 000111244566666666554 45787 899999999988765 32 3333210 0112
Q ss_pred ceEEEcCeEEEcCCCCCC
Q 020815 226 PNVMEAKVVVSSCGHDGP 243 (321)
Q Consensus 226 ~~~i~a~~VI~AtG~~~~ 243 (321)
..++.+|.||+|||+++.
T Consensus 150 ~~~~~~d~VVvAtG~~s~ 167 (464)
T 2xve_A 150 IYSEEFDYVVCCTGHFST 167 (464)
T ss_dssp EEEEEESEEEECCCSSSS
T ss_pred eEEEEcCEEEECCCCCCC
Confidence 367899999999997654
No 109
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.15 E-value=1.5e-10 Score=105.54 Aligned_cols=129 Identities=13% Similarity=0.173 Sum_probs=77.5
Q ss_pred ccEEEECCChHHHHHHHHhhc---CCCCeEEEEeccCCCCCccccC------cccchh---hh-cc-------chHHHHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSK---NPNIQIAIIEQSVSPGGGAWLG------GQLFSA---MV-VR-------KPAHIFL 150 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~---~~G~~V~liEk~~~~gg~~~~~------g~~~~~---~~-~~-------~~~~~~l 150 (321)
+||+|||||++|+++|+.|++ . |++|+|+||+..+||..... +..++. .+ .. ....+.+
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~-G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~ 80 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSG-PLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDEL 80 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-C-CEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccC-CceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHH
Confidence 599999999999999999999 8 99999999998877743211 000000 00 00 0112223
Q ss_pred HHcCCCcccC---------CC---eEEEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceeccc
Q 020815 151 DELGIDYDEQ---------DN---YVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNH 218 (321)
Q Consensus 151 ~~~g~~~~~~---------~~---~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~ 218 (321)
...++..... .. +........+.+.|.++ .|++|+++++|++|..+++.+. |.+.+
T Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~----~g~~i~~~~~V~~i~~~~~~~~-v~~~~------- 148 (342)
T 3qj4_A 81 LAYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKE----SGAEVYFRHRVTQINLRDDKWE-VSKQT------- 148 (342)
T ss_dssp HHTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHH----HTCEEESSCCEEEEEECSSSEE-EEESS-------
T ss_pred HhCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHh----cCCEEEeCCEEEEEEEcCCEEE-EEECC-------
Confidence 3333321110 01 11111123344444433 3899999999999998776543 44321
Q ss_pred CCCCCCCceEEEcCeEEEcCC
Q 020815 219 DTQSCMDPNVMEAKVVVSSCG 239 (321)
Q Consensus 219 ~~~~~g~~~~i~a~~VI~AtG 239 (321)
+.++++|.||+|+.
T Consensus 149 -------g~~~~ad~vV~A~p 162 (342)
T 3qj4_A 149 -------GSPEQFDLIVLTMP 162 (342)
T ss_dssp -------SCCEEESEEEECSC
T ss_pred -------CCEEEcCEEEECCC
Confidence 24579999999998
No 110
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.13 E-value=4.2e-10 Score=99.87 Aligned_cols=111 Identities=18% Similarity=0.183 Sum_probs=75.7
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecH
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 169 (321)
.+||+|||||++|+++|+.|++. |++|+|||+.... +..+... .+++ ... ....
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~~~-~~~~~~~------------------~~~~--~~~----~~~~ 55 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRA-RKNILLVDAGERR-NRFASHS------------------HGFL--GQD----GKAP 55 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCCCG-GGGCSCC------------------CSST--TCT----TCCH
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCCcc-cccchhh------------------cCCc--CCC----CCCH
Confidence 47999999999999999999999 9999999997422 1111000 0000 000 1234
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
..+...+.+.+.+..+++++.. +|+++..+++.. .+.+. +..++.+|.||+|+|...
T Consensus 56 ~~~~~~~~~~~~~~~~v~~~~~-~v~~i~~~~~~~-~v~~~--------------~g~~~~~d~vviAtG~~~ 112 (297)
T 3fbs_A 56 GEIIAEARRQIERYPTIHWVEG-RVTDAKGSFGEF-IVEID--------------GGRRETAGRLILAMGVTD 112 (297)
T ss_dssp HHHHHHHHHHHTTCTTEEEEES-CEEEEEEETTEE-EEEET--------------TSCEEEEEEEEECCCCEE
T ss_pred HHHHHHHHHHHHhcCCeEEEEe-EEEEEEEcCCeE-EEEEC--------------CCCEEEcCEEEECCCCCC
Confidence 5677777777765458888766 899998877642 23332 225799999999999653
No 111
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.12 E-value=1.2e-10 Score=111.30 Aligned_cols=131 Identities=17% Similarity=0.227 Sum_probs=79.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchH-HHHH---HHcCCCcccC-CCeE
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPA-HIFL---DELGIDYDEQ-DNYV 164 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~-~~~l---~~~g~~~~~~-~~~~ 164 (321)
+|||+|||||++|+++|+.|++. |++|+|||+. ..||.|++.+|++.+.+..... .+.+ ..+|++.... .++.
T Consensus 20 ~~dVvIIGgG~aGl~aA~~la~~-G~~V~liE~~-~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 97 (478)
T 3dk9_A 20 SYDYLVIGGGSGGLASARRAAEL-GARAAVVESH-KLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNWR 97 (478)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT-TCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCCHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCeEEEEecC-CCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccCHH
Confidence 68999999999999999999999 9999999986 7899998888887766544322 1222 2234332211 0110
Q ss_pred E-EecH----HHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCC
Q 020815 165 V-IKHA----ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCG 239 (321)
Q Consensus 165 ~-~~~~----~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG 239 (321)
. .... ..+...+...+ +..+++++.+. +..+ +... ..+.. +..++++|+||+|||
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~-~~~gv~~~~g~-~~~~--~~~~-~~v~~---------------~g~~~~~d~lviAtG 157 (478)
T 3dk9_A 98 VIKEKRDAYVSRLNAIYQNNL-TKSHIEIIRGH-AAFT--SDPK-PTIEV---------------SGKKYTAPHILIATG 157 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHTTCEEEESC-EEEC--SCSS-CEEEE---------------TTEEEECSCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HhCCcEEEEeE-EEEe--eCCe-EEEEE---------------CCEEEEeeEEEEccC
Confidence 0 0011 11222222333 35789998874 2222 2211 11222 226799999999999
Q ss_pred CCC
Q 020815 240 HDG 242 (321)
Q Consensus 240 ~~~ 242 (321)
...
T Consensus 158 ~~p 160 (478)
T 3dk9_A 158 GMP 160 (478)
T ss_dssp EEE
T ss_pred CCC
Confidence 643
No 112
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.12 E-value=3.3e-10 Score=108.88 Aligned_cols=47 Identities=30% Similarity=0.463 Sum_probs=39.8
Q ss_pred cccEEEECCChHHHHHHHHhhcC-C-CCeEEEEeccCCCCCccccCcccc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKN-P-NIQIAIIEQSVSPGGGAWLGGQLF 137 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~-~-G~~V~liEk~~~~gg~~~~~g~~~ 137 (321)
+|||+|||||++|+++|++|++. + |.+|+|||+.. +||.|.+.++.+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~p 50 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVP 50 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccc
Confidence 48999999999999999999984 3 79999999987 888876655443
No 113
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.11 E-value=7.5e-11 Score=112.38 Aligned_cols=135 Identities=16% Similarity=0.217 Sum_probs=83.1
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccch-HHHH----HHHcCCCcccC-CCe
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKP-AHIF----LDELGIDYDEQ-DNY 163 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~-~~~~----l~~~g~~~~~~-~~~ 163 (321)
+|||+|||||++|+++|+.|++. |.+|+|||+.+.+||.|+..++.+.+.+.... ..+. +..+|+++... .++
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~-g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 84 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQL-GFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDL 84 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCH
Confidence 58999999999999999999999 99999999998899998877777665443321 1112 33455542210 000
Q ss_pred EE-EecHHH----HHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcC
Q 020815 164 VV-IKHAAL----FTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSC 238 (321)
Q Consensus 164 ~~-~~~~~~----~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~At 238 (321)
.. ...... +...+.+.+. +.+++++.++.+. .+.+.+ .+.. .+|+..++++|.||+||
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~-~~gv~~~~g~~~~---~~~~~~---~v~~----------~~G~~~~i~~d~lIiAt 147 (470)
T 1dxl_A 85 AAMMGQKDKAVSNLTRGIEGLFK-KNKVTYVKGYGKF---VSPSEI---SVDT----------IEGENTVVKGKHIIIAT 147 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-HHTCEEEESCEEE---EETTEE---EECC----------SSSCCEEEECSEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hCCCEEEEeEEEE---ecCCEE---EEEe----------CCCceEEEEcCEEEECC
Confidence 00 000111 2222233333 5689999997543 344432 2211 11122679999999999
Q ss_pred CCCC
Q 020815 239 GHDG 242 (321)
Q Consensus 239 G~~~ 242 (321)
|..+
T Consensus 148 Gs~p 151 (470)
T 1dxl_A 148 GSDV 151 (470)
T ss_dssp CEEE
T ss_pred CCCC
Confidence 9654
No 114
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.10 E-value=1.3e-10 Score=105.17 Aligned_cols=113 Identities=15% Similarity=0.198 Sum_probs=75.4
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEec----cCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEE
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQ----SVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVV 165 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk----~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~ 165 (321)
.+||+|||||++|+++|+.|++. |++|+|||+ ....||......... .. ..+..
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~-g~~v~lie~~~~~~~~~gg~~~~~~~~~----------------~~-----~~~~~ 65 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARA-ELKPLLFEGWMANDIAPGGQLTTTTDVE----------------NF-----PGFPE 65 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCCEEECCSSBTTBCTTCGGGGCSEEC----------------CS-----TTCTT
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCeEEEEeccCccccCCCceeeeccccc----------------cC-----CCCcc
Confidence 58999999999999999999999 999999999 334444322111000 00 00000
Q ss_pred EecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 166 IKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 166 ~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
......+...+.+.+. +.+++++.++ ++++..+++.+. |.+ + ..++++|+||+|+|..+
T Consensus 66 ~~~~~~~~~~l~~~~~-~~gv~~~~~~-v~~i~~~~~~~~-v~~-~--------------~~~~~~~~vv~A~G~~~ 124 (333)
T 1vdc_A 66 GILGVELTDKFRKQSE-RFGTTIFTET-VTKVDFSSKPFK-LFT-D--------------SKAILADAVILAIGAVA 124 (333)
T ss_dssp CEEHHHHHHHHHHHHH-HTTCEEECCC-CCEEECSSSSEE-EEC-S--------------SEEEEEEEEEECCCEEE
T ss_pred CCCHHHHHHHHHHHHH-HCCCEEEEeE-EEEEEEcCCEEE-EEE-C--------------CcEEEcCEEEECCCCCc
Confidence 1234566677766665 5789999986 888876555322 222 1 26799999999999654
No 115
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.10 E-value=2.4e-10 Score=104.98 Aligned_cols=130 Identities=14% Similarity=0.202 Sum_probs=77.9
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCC-ccc--CCCe--
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGID-YDE--QDNY-- 163 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~-~~~--~~~~-- 163 (321)
++||+|||||++|+++|+.|++. |. +|+|||+.. +||.+....... ... .... ....+|+. +.. ....
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~-g~~~v~lie~~~-~Gg~~~~~~~~~-~~~-~~~~--~~~~~g~~~~~~~~~~~~~~ 77 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDF-GITDVIILEKGT-VGHSFKHWPKST-RTI-TPSF--TSNGFGMPDMNAISMDTSPA 77 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCCEEEECSSS-TTHHHHTSCTTC-BCS-SCCC--CCGGGTCCCTTCSSTTCCHH
T ss_pred cCcEEEECcCHHHHHHHHHHHHc-CCCcEEEEecCC-CCCccccCcccc-ccc-Ccch--hcccCCchhhhhcccccccc
Confidence 58999999999999999999999 99 999999987 666432211000 000 0000 00011220 000 0000
Q ss_pred ----EEEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCC
Q 020815 164 ----VVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCG 239 (321)
Q Consensus 164 ----~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG 239 (321)
........+...+.+.+. +.|++++.+++|+++..+++.+ .|.+. + .++.+|+||+|+|
T Consensus 78 ~~~~~~~~~~~~~~~~l~~~~~-~~gv~i~~~~~v~~i~~~~~~~-~v~~~--------------~-g~~~~d~vVlAtG 140 (369)
T 3d1c_A 78 FTFNEEHISGETYAEYLQVVAN-HYELNIFENTVVTNISADDAYY-TIATT--------------T-ETYHADYIFVATG 140 (369)
T ss_dssp HHHCCSSCBHHHHHHHHHHHHH-HTTCEEECSCCEEEEEECSSSE-EEEES--------------S-CCEEEEEEEECCC
T ss_pred ccccccCCCHHHHHHHHHHHHH-HcCCeEEeCCEEEEEEECCCeE-EEEeC--------------C-CEEEeCEEEECCC
Confidence 001133455555555554 5799999999999998765432 23331 1 2588999999999
Q ss_pred CCC
Q 020815 240 HDG 242 (321)
Q Consensus 240 ~~~ 242 (321)
...
T Consensus 141 ~~~ 143 (369)
T 3d1c_A 141 DYN 143 (369)
T ss_dssp STT
T ss_pred CCC
Confidence 865
No 116
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.09 E-value=1.7e-10 Score=110.27 Aligned_cols=131 Identities=19% Similarity=0.255 Sum_probs=81.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccch-HHHHH----HHcCCCcccCCCeE
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKP-AHIFL----DELGIDYDEQDNYV 164 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~-~~~~l----~~~g~~~~~~~~~~ 164 (321)
+|||+|||||++|+++|+.|++. |++|+|||+.+.+||.|...++++.+.+.... ..+.+ ..+|+++. ...
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~-G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~--~~~- 80 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQL-GFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVN--GDI- 80 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEEC--SCE-
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccC--CCC-
Confidence 58999999999999999999999 99999999988899988777776655443321 12222 22343321 011
Q ss_pred EEecHHH-----------HHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceE-----
Q 020815 165 VIKHAAL-----------FTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNV----- 228 (321)
Q Consensus 165 ~~~~~~~-----------~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~----- 228 (321)
.. +... +...+.+.+. +.|++++.++.+. .+++.+ .|.+. ++...+
T Consensus 81 ~~-~~~~~~~~~~~~~~~l~~~~~~~~~-~~gv~~~~g~~~~---~~~~~v-~V~~~------------~G~~~~~~~~~ 142 (478)
T 1v59_A 81 KI-NVANFQKAKDDAVKQLTGGIELLFK-KNKVTYYKGNGSF---EDETKI-RVTPV------------DGLEGTVKEDH 142 (478)
T ss_dssp EE-CHHHHHHHHHHHHHHHHHHHHHHHH-HTTCEEEESEEEE---SSSSEE-EEECC------------TTCTTCCSSCE
T ss_pred cc-CHHHHHHHHHHHHHHHHHHHHHHHH-hCCCEEEEEEEEE---ccCCeE-EEEec------------CCCcccccccc
Confidence 11 1111 1122333343 5799999997654 133332 22221 111134
Q ss_pred -EEcCeEEEcCCCCC
Q 020815 229 -MEAKVVVSSCGHDG 242 (321)
Q Consensus 229 -i~a~~VI~AtG~~~ 242 (321)
+++|+||+|||...
T Consensus 143 ~i~~d~lViAtGs~p 157 (478)
T 1v59_A 143 ILDVKNIIVATGSEV 157 (478)
T ss_dssp EEEEEEEEECCCEEE
T ss_pred eEEeCEEEECcCCCC
Confidence 99999999999654
No 117
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.09 E-value=3.4e-10 Score=101.37 Aligned_cols=111 Identities=20% Similarity=0.277 Sum_probs=75.4
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEE-EeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEec
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAI-IEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKH 168 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~l-iEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~ 168 (321)
.+||+|||||++|+++|+.|++. |.+|+| +|+ ..+||.+........ ...+.....
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~li~e~-~~~gG~~~~~~~~~~---------------------~~~~~~~~~ 60 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRG-GLKNVVMFEK-GMPGGQITSSSEIEN---------------------YPGVAQVMD 60 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-TCSCEEEECS-SSTTGGGGGCSCBCC---------------------STTCCSCBC
T ss_pred CceEEEECCCHHHHHHHHHHHHC-CCCeEEEEeC-CCCCceeeeeceecc---------------------CCCCCCCCC
Confidence 58999999999999999999999 999999 999 566665432211100 001110123
Q ss_pred HHHHHHHHHHHHHcCCCcEEEcCceEEEEEEEC--CEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 169 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG--GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 169 ~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~--~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
..++...+.+.+. +.+++++.+ +|+++ .++ +.+. +.... +. ++.+|+||+|+|..
T Consensus 61 ~~~~~~~~~~~~~-~~~v~~~~~-~v~~i-~~~~~~~~~-v~~~~-------------~~-~~~~d~lvlAtG~~ 117 (315)
T 3r9u_A 61 GISFMAPWSEQCM-RFGLKHEMV-GVEQI-LKNSDGSFT-IKLEG-------------GK-TELAKAVIVCTGSA 117 (315)
T ss_dssp HHHHHHHHHHHHT-TTCCEEECC-CEEEE-EECTTSCEE-EEETT-------------SC-EEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHH-HcCcEEEEE-EEEEE-ecCCCCcEE-EEEec-------------CC-EEEeCEEEEeeCCC
Confidence 4566677666665 689999998 88888 665 4332 11211 22 89999999999963
No 118
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.08 E-value=6.4e-10 Score=99.61 Aligned_cols=113 Identities=19% Similarity=0.287 Sum_probs=75.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecH
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 169 (321)
+|||+|||||++|+++|+.|++. |.+|+|||+. .||.+........ +... . ....
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~-g~~v~li~~~--~gG~~~~~~~~~~------------------~~~~-~---~~~~ 55 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARK-GIRTGLMGER--FGGQILDTVDIEN------------------YISV-P---KTEG 55 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTT-TCCEEEECSS--TTGGGGGCCEECC------------------BTTB-S---SEEH
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCcEEEEeCC--CCceecccccccc------------------ccCc-C---CCCH
Confidence 37999999999999999999999 9999999864 5554332111100 0000 0 1133
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCceEEEEEEEC--CEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG--GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~--~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
..+...+.+.+. +.+++++.+++|+.+..++ +....+.+. ++.++.+|+||+|+|...
T Consensus 56 ~~~~~~~~~~~~-~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~--------------~g~~~~~~~lv~AtG~~~ 115 (310)
T 1fl2_A 56 QKLAGALKVHVD-EYDVDVIDSQSASKLIPAAVEGGLHQIETA--------------SGAVLKARSIIVATGAKW 115 (310)
T ss_dssp HHHHHHHHHHHH-TSCEEEECSCCEEEEECCSSTTCCEEEEET--------------TSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHH-HcCCeEEccCEEEEEEecccCCceEEEEEC--------------CCCEEEeCEEEECcCCCc
Confidence 556666666665 6799999999999886542 122233332 125789999999999643
No 119
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.08 E-value=1.6e-10 Score=110.27 Aligned_cols=135 Identities=21% Similarity=0.303 Sum_probs=75.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCC------CCCccccCcccchhhhccch-HHHH----HHHcCCCcc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVS------PGGGAWLGGQLFSAMVVRKP-AHIF----LDELGIDYD 158 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~------~gg~~~~~g~~~~~~~~~~~-~~~~----l~~~g~~~~ 158 (321)
+|||+|||||++|+++|+.|++. |++|+|||++.. .||.|.+.+|.+.+.+.... .... +..+|+.+.
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~-G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~ 81 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQL-GLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTG 81 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHH-TCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECS
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-CCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 69999999999999999999999 999999999874 44444444555544443321 1111 233443321
Q ss_pred cC-CCeEE-EecHHHHHHHH---HHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCe
Q 020815 159 EQ-DNYVV-IKHAALFTSTI---MSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKV 233 (321)
Q Consensus 159 ~~-~~~~~-~~~~~~~~~~l---~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~ 233 (321)
.. .++.. ......+...+ ++...++.+++++.+..+. .+.+.+ .|.. .+++..++.+|.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~---~~~~~~-~v~~------------~~g~~~~~~~d~ 145 (476)
T 3lad_A 82 EVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKL---LAGKKV-EVTA------------ADGSSQVLDTEN 145 (476)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEE---CSTTCE-EEEC------------TTSCEEEECCSC
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE---ecCCEE-EEEc------------CCCceEEEEcCE
Confidence 10 00000 00111111111 2223335689998884332 233322 1221 112336799999
Q ss_pred EEEcCCCC
Q 020815 234 VVSSCGHD 241 (321)
Q Consensus 234 VI~AtG~~ 241 (321)
||+|||..
T Consensus 146 lvlAtG~~ 153 (476)
T 3lad_A 146 VILASGSK 153 (476)
T ss_dssp EEECCCEE
T ss_pred EEEcCCCC
Confidence 99999964
No 120
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.08 E-value=7e-10 Score=105.30 Aligned_cols=132 Identities=22% Similarity=0.289 Sum_probs=80.8
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccch-HHH---HHHHcCCCcccC-CCeE
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKP-AHI---FLDELGIDYDEQ-DNYV 164 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~-~~~---~l~~~g~~~~~~-~~~~ 164 (321)
+|||+|||||++|+++|++|++. |.+|+|||+. ..||.|...++++.+.+.... ..+ ++..+|+++... .++.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 80 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQL-GQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDFA 80 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT-TCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCHH
Confidence 58999999999999999999999 9999999998 788888777776655443321 112 222334432110 0000
Q ss_pred E-EecHHH----HHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCc-eEEEcCeEEEcC
Q 020815 165 V-IKHAAL----FTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDP-NVMEAKVVVSSC 238 (321)
Q Consensus 165 ~-~~~~~~----~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~-~~i~a~~VI~At 238 (321)
. ..+... +...+.+.+ ++.|++++.++.+. .+++.+ .|... ++ .++++|+||+||
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~~-~~~gv~~~~g~~~~---id~~~v-~V~~~--------------~G~~~i~~d~lViAT 141 (455)
T 1ebd_A 81 KVQEWKASVVKKLTGGVEGLL-KGNKVEIVKGEAYF---VDANTV-RVVNG--------------DSAQTYTFKNAIIAT 141 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HTTTCEEEESEEEE---EETTEE-EEEET--------------TEEEEEECSEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HhCCCEEEEEEEEE---ccCCeE-EEEeC--------------CCcEEEEeCEEEEec
Confidence 0 000111 222333334 36799999986543 355532 22221 12 578999999999
Q ss_pred CCCC
Q 020815 239 GHDG 242 (321)
Q Consensus 239 G~~~ 242 (321)
|...
T Consensus 142 Gs~p 145 (455)
T 1ebd_A 142 GSRP 145 (455)
T ss_dssp CEEE
T ss_pred CCCC
Confidence 9643
No 121
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.08 E-value=3e-10 Score=108.14 Aligned_cols=129 Identities=16% Similarity=0.238 Sum_probs=79.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccch-HH---HHHHHcCCCcccC-CCeE
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKP-AH---IFLDELGIDYDEQ-DNYV 164 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~-~~---~~l~~~g~~~~~~-~~~~ 164 (321)
++||+|||||++|+++|..|++. |.+|+|||+.. .||.|.+.++++.+.+.... .. +.+..+|++ ... .++.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~-g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~-~~~~~~~~ 82 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQL-GLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLK-AKPELDLK 82 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEE-CCCEECHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCC-CCCCcCHH
Confidence 58999999999999999999999 99999999986 88888877777765544321 11 222334443 100 0000
Q ss_pred -EEecHHHHHHHH---HHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCC
Q 020815 165 -VIKHAALFTSTI---MSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGH 240 (321)
Q Consensus 165 -~~~~~~~~~~~l---~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~ 240 (321)
+......+.+.+ +....++.|++++.++.+. .+... +.+. +.++++|+||+|||.
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~~~---v~v~---------------g~~~~~d~lViATGs 141 (464)
T 2eq6_A 83 KLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARL---VGPKE---VEVG---------------GERYGAKSLILATGS 141 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEE---EETTE---EEET---------------TEEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEE---ccCCE---EEEc---------------cEEEEeCEEEEcCCC
Confidence 000111122222 1222335799999886442 24442 2221 157899999999996
Q ss_pred CC
Q 020815 241 DG 242 (321)
Q Consensus 241 ~~ 242 (321)
..
T Consensus 142 ~p 143 (464)
T 2eq6_A 142 EP 143 (464)
T ss_dssp EE
T ss_pred CC
Confidence 43
No 122
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=99.08 E-value=9.5e-11 Score=113.20 Aligned_cols=56 Identities=14% Similarity=0.168 Sum_probs=44.1
Q ss_pred HHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 176 IMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 176 l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
+...+....|++++.++.|.+++.++++++||..... +...++.|+.||+|.|+.+
T Consensus 216 ~~~~~~~r~nl~v~~~~~v~~i~~~~~~a~gv~~~~~-----------~~~~~~~a~~VILsAGai~ 271 (526)
T 3t37_A 216 LTKAVRGRKNLTILTGSRVRRLKLEGNQVRSLEVVGR-----------QGSAEVFADQIVLCAGALE 271 (526)
T ss_dssp SCHHHHTCTTEEEECSCEEEEEEEETTEEEEEEEEET-----------TEEEEEEEEEEEECSHHHH
T ss_pred ccccccCCCCeEEEeCCEEEEEEecCCeEEEEEEEec-----------CceEEEeecceEEcccccC
Confidence 3344445789999999999999999999999987531 1236788999999999654
No 123
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.08 E-value=7.1e-11 Score=112.56 Aligned_cols=134 Identities=16% Similarity=0.180 Sum_probs=82.4
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccch-HHHH----HHHcCCCcccCC--C
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKP-AHIF----LDELGIDYDEQD--N 162 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~-~~~~----l~~~g~~~~~~~--~ 162 (321)
+|||+|||||++|+++|++|++. |++|+|||+.+.+||.|.+.++++.+.+.... ..+. +..+|+++.... +
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 80 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQL-GMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMD 80 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccC
Confidence 58999999999999999999999 99999999998899988877777665443321 1122 344565531110 0
Q ss_pred eEE-EecHHH----HHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEc
Q 020815 163 YVV-IKHAAL----FTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSS 237 (321)
Q Consensus 163 ~~~-~~~~~~----~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~A 237 (321)
+.. ...... +...+.+.+ ++.|++++.++.+ . .+.+.+. |... +|+..++.+|++|+|
T Consensus 81 ~~~~~~~~~~~~~~l~~~~~~~~-~~~~v~~~~g~~~-~--i~~~~~~-v~~~------------~G~~~~~~~d~lviA 143 (468)
T 2qae_A 81 SAKMQQQKERAVKGLTGGVEYLF-KKNKVTYYKGEGS-F--ETAHSIR-VNGL------------DGKQEMLETKKTIIA 143 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-HHHTCEEEEEEEE-E--EETTEEE-EEET------------TSCEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HhCCCEEEEEEEE-E--eeCCEEE-EEec------------CCceEEEEcCEEEEC
Confidence 000 000111 112222333 3568999988643 2 3444322 2221 112267999999999
Q ss_pred CCCC
Q 020815 238 CGHD 241 (321)
Q Consensus 238 tG~~ 241 (321)
||..
T Consensus 144 tG~~ 147 (468)
T 2qae_A 144 TGSE 147 (468)
T ss_dssp CCEE
T ss_pred CCCC
Confidence 9964
No 124
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.07 E-value=4.6e-10 Score=100.94 Aligned_cols=112 Identities=12% Similarity=0.158 Sum_probs=74.7
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecH
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 169 (321)
.+||+|||||++|+++|+.|++. |++|+|||+. .+||.+........ . ..+......
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~-~~gg~~~~~~~~~~----------------~-----~~~~~~~~~ 61 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARA-NLQPVLITGM-EKGGQLTTTTEVEN----------------W-----PGDPNDLTG 61 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT-TCCCEEECCS-STTGGGGGCSBCCC----------------S-----TTCCSSCBH
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCcEEEEccC-CCCceEecchhhhh----------------C-----CCCCCCCCH
Confidence 58999999999999999999999 9999999975 56665432111000 0 001001133
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
..+...+.+.+. +.+++++.++ ++.+..+++.+.. .. +..++.+|+||+|+|...
T Consensus 62 ~~~~~~~~~~~~-~~~~~~~~~~-v~~i~~~~~~~~v--~~--------------~~~~~~~~~lv~AtG~~~ 116 (320)
T 1trb_A 62 PLLMERMHEHAT-KFETEIIFDH-INKVDLQNRPFRL--NG--------------DNGEYTCDALIIATGASA 116 (320)
T ss_dssp HHHHHHHHHHHH-HTTCEEECCC-EEEEECSSSSEEE--EE--------------SSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHH-HCCCEEEEee-eeEEEecCCEEEE--Ee--------------CCCEEEcCEEEECCCCCc
Confidence 456666665554 5789999985 8887665554322 21 125789999999999754
No 125
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.06 E-value=7.5e-11 Score=112.60 Aligned_cols=131 Identities=18% Similarity=0.218 Sum_probs=81.9
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccch-H---HH--HHHHcCCCcccCCCe
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKP-A---HI--FLDELGIDYDEQDNY 163 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~-~---~~--~l~~~g~~~~~~~~~ 163 (321)
+|||+|||||++|+++|+.|++. |++|+|||+.+.+||.|...++.+.+.+.... . .. .+..+|++.. ..
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~---~~ 81 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQL-GFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMS---EV 81 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEES---CE
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccC---CC
Confidence 58999999999999999999999 99999999998899988777777765544321 1 11 3334555321 11
Q ss_pred EEEecH------HHHH----HHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCe
Q 020815 164 VVIKHA------ALFT----STIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKV 233 (321)
Q Consensus 164 ~~~~~~------~~~~----~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~ 233 (321)
..... ..+. ..+.+.+ ++.+++++.++.+ . .+.+.+. |.+. ++...++++|+
T Consensus 82 -~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~gv~~~~g~~~-~--~~~~~~~-v~~~------------~gg~~~~~~d~ 143 (474)
T 1zmd_A 82 -RLNLDKMMEQKSTAVKALTGGIAHLF-KQNKVVHVNGYGK-I--TGKNQVT-ATKA------------DGGTQVIDTKN 143 (474)
T ss_dssp -EECHHHHHHHHHHHHHHHHHHHHHHH-HHTTCEEEESEEE-E--EETTEEE-EECT------------TSCEEEEEEEE
T ss_pred -ccCHHHHHHHHHHHHHHHHHHHHHHH-HhCCCEEEEEEEE-E--ecCCEEE-EEec------------CCCcEEEEeCE
Confidence 11111 1111 1223333 3579999988542 2 2444322 2211 00125799999
Q ss_pred EEEcCCCCC
Q 020815 234 VVSSCGHDG 242 (321)
Q Consensus 234 VI~AtG~~~ 242 (321)
||+|||...
T Consensus 144 lViAtGs~p 152 (474)
T 1zmd_A 144 ILIATGSEV 152 (474)
T ss_dssp EEECCCEEE
T ss_pred EEECCCCCC
Confidence 999999643
No 126
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.06 E-value=2.5e-10 Score=108.52 Aligned_cols=130 Identities=17% Similarity=0.265 Sum_probs=81.0
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccch-HHHHHHH------cCCCcccC-C
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKP-AHIFLDE------LGIDYDEQ-D 161 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~-~~~~l~~------~g~~~~~~-~ 161 (321)
+|||+|||||++|+++|+.|++. |.+|+|||+ ...||.|++.++++.+.+.... ..+.+.+ +|+++... .
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~-g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 82 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQL-GIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASPRL 82 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHH-TCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCCCcc
Confidence 58999999999999999999999 999999999 6789998877777765544321 2222222 45543211 0
Q ss_pred CeEE-EecHHHHHHHH---HHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEc
Q 020815 162 NYVV-IKHAALFTSTI---MSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSS 237 (321)
Q Consensus 162 ~~~~-~~~~~~~~~~l---~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~A 237 (321)
++.. ......+...+ .+...++.|++++.++.+. .++.. |.+. + .++.+|++|+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~---~~~~~---v~v~--------------~-~~~~~d~lviA 141 (458)
T 1lvl_A 83 DIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKV---LDGKQ---VEVD--------------G-QRIQCEHLLLA 141 (458)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEE---EETTE---EEET--------------T-EEEECSEEEEC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEE---ccCCE---EEEe--------------e-EEEEeCEEEEe
Confidence 1100 00111111111 1223346799999986543 24442 2221 1 57899999999
Q ss_pred CCCCC
Q 020815 238 CGHDG 242 (321)
Q Consensus 238 tG~~~ 242 (321)
||...
T Consensus 142 TGs~p 146 (458)
T 1lvl_A 142 TGSSS 146 (458)
T ss_dssp CCEEE
T ss_pred CCCCC
Confidence 99643
No 127
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.06 E-value=3.1e-10 Score=103.15 Aligned_cols=112 Identities=21% Similarity=0.256 Sum_probs=73.7
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecH
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 169 (321)
.+||+|||||++|+++|+.|++. |++|+|||+. .+||.+....... . .+ .+......
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~-~~gg~~~~~~~~~-----~-----------~~-----~~~~~~~~ 70 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAARA-QLAPLVFEGT-SFGGALMTTTDVE-----N-----------YP-----GFRNGITG 70 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHT-TCCCEEECCS-SCSCGGGSCSCBC-----C-----------ST-----TCTTCBCH
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEecC-CCCCceeccchhh-----h-----------cC-----CCCCCCCH
Confidence 68999999999999999999999 9999999986 5565432211100 0 00 00001123
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEE-EEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGV-VTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv-~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
..+...+.+.+. +.+++++.++ ++++.. ++.+ .+ .+. +..++.+|+||+|+|...
T Consensus 71 ~~~~~~l~~~~~-~~~v~~~~~~-v~~i~~-~~~~-~v~~~~--------------~g~~~~~d~lviAtG~~~ 126 (335)
T 2a87_A 71 PELMDEMREQAL-RFGADLRMED-VESVSL-HGPL-KSVVTA--------------DGQTHRARAVILAMGAAA 126 (335)
T ss_dssp HHHHHHHHHHHH-HTTCEEECCC-EEEEEC-SSSS-EEEEET--------------TSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHH-HcCCEEEEee-EEEEEe-CCcE-EEEEeC--------------CCCEEEeCEEEECCCCCc
Confidence 456666666665 5799999986 877765 3221 12 221 125799999999999754
No 128
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.06 E-value=1.2e-09 Score=103.63 Aligned_cols=41 Identities=29% Similarity=0.361 Sum_probs=38.3
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCcc
Q 020815 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA 130 (321)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~ 130 (321)
.++||||||+|++||++|+.|++. |++|+|+|+++.+||.+
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~-G~~V~vlE~~~~~GG~~ 50 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVD-GKKVLHIDKQDHYGGEA 50 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCGGG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCCCCCccc
Confidence 368999999999999999999999 99999999999998864
No 129
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.05 E-value=2.2e-10 Score=109.98 Aligned_cols=40 Identities=38% Similarity=0.659 Sum_probs=37.6
Q ss_pred cccEEEECCChHHHHHHHHhhc-CCCCeEEEEeccCCCCCcc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSK-NPNIQIAIIEQSVSPGGGA 130 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~-~~G~~V~liEk~~~~gg~~ 130 (321)
++||||||||++||+||++|++ . |.+|+|+|+++.+||.+
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~-G~~V~VlE~~~~~GG~~ 50 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQID-GPSWMIVDSNETPGGLA 50 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHC-CSCEEEEESSSSCCGGG
T ss_pred CCCEEEECCcHHHHHHHHHHHhhC-CCCEEEEECCCCCcCCe
Confidence 6899999999999999999997 6 99999999999999865
No 130
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.04 E-value=1.7e-10 Score=110.94 Aligned_cols=51 Identities=27% Similarity=0.485 Sum_probs=44.7
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVV 142 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~ 142 (321)
+|||+|||||++|+++|+.|++. |.+|+|||++ ..||.|.+.++++.+.+.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~-g~~V~liE~~-~~GG~c~~~gc~P~k~l~ 52 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARH-NAKVALVEKS-RLGGTCVNVGCVPKKIMF 52 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-TCCEEEEESS-STTHHHHHTSHHHHHHHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHC-CCcEEEEeCC-CcCccccccCCcchHHHH
Confidence 58999999999999999999999 9999999998 588888877887765543
No 131
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.03 E-value=1.2e-09 Score=103.89 Aligned_cols=52 Identities=27% Similarity=0.465 Sum_probs=45.8
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhcc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVR 143 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~ 143 (321)
++||+|||||++|+++|++|++. |.+|+|||++ .+||.|.+.|+++.+.+..
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~-~~GG~~~~~g~ip~k~l~~ 55 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQ-GAQVTLIERG-TIGGTCVNVGCVPSKIMIR 55 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESS-STTHHHHHHSHHHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCEEEEEeCC-CCCccccCCCccchHHHHH
Confidence 58999999999999999999999 9999999998 6899888888877665544
No 132
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.03 E-value=6.8e-10 Score=105.66 Aligned_cols=40 Identities=35% Similarity=0.600 Sum_probs=37.1
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC--eEEEEeccCCCCCccc
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQSVSPGGGAW 131 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~liEk~~~~gg~~~ 131 (321)
+||+|||||++||++|++|++. |. +|+|+|+++.+||.+.
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~-G~~~~V~vlEa~~~~GG~~~ 44 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRA-PCPPKVVLVESSERLGGWIR 44 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTS-SSCCEEEEECSSSSSBTTCC
T ss_pred ceEEEECCcHHHHHHHHHHHhC-CCCCcEEEEeCCCCCCCceE
Confidence 6999999999999999999999 99 9999999988888663
No 133
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.01 E-value=1.7e-10 Score=110.61 Aligned_cols=54 Identities=28% Similarity=0.472 Sum_probs=46.7
Q ss_pred cccEEEECCChHHHHHHHHhhc-CCCCeEEEEe--------ccCCCCCccccCcccchhhhccc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSK-NPNIQIAIIE--------QSVSPGGGAWLGGQLFSAMVVRK 144 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~-~~G~~V~liE--------k~~~~gg~~~~~g~~~~~~~~~~ 144 (321)
+|||+|||||++|+++|++|++ . |++|+||| +...+||.|.+.+|++.+.+...
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~-G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~ 65 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLH-KKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTG 65 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHH-CCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHH
T ss_pred cccEEEECCCHHHHHHHHHHHHHc-CCEEEEEecccccccccCCCcCccccCCCcchhhHHHHH
Confidence 5899999999999999999999 9 99999999 35578999888888877665543
No 134
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.01 E-value=1.7e-10 Score=110.27 Aligned_cols=52 Identities=21% Similarity=0.309 Sum_probs=45.4
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhcc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVR 143 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~ 143 (321)
+|||+|||||++|+++|+.|++. |.+|+|||++ ..||.|.+.+|++.+.+..
T Consensus 11 ~~dVvVIGgG~aGl~aA~~l~~~-g~~V~liE~~-~~GG~~~n~gciP~k~l~~ 62 (479)
T 2hqm_A 11 HYDYLVIGGGSGGVASARRAASY-GAKTLLVEAK-ALGGTCVNVGCVPKKVMWY 62 (479)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-SCCEEEEESS-CTTHHHHHHSHHHHHHHHH
T ss_pred cCCEEEEcCCHHHHHHHHHHHHC-CCcEEEEeCC-CcCCcCcccCcHHHHHHHH
Confidence 68999999999999999999999 9999999997 6888887777777665543
No 135
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.01 E-value=9.2e-10 Score=104.72 Aligned_cols=129 Identities=17% Similarity=0.173 Sum_probs=79.0
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccc-hHHHHHH----HcCCCcccCCCeE
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRK-PAHIFLD----ELGIDYDEQDNYV 164 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~-~~~~~l~----~~g~~~~~~~~~~ 164 (321)
+|||+|||||++|+++|+.|++. |++|+|||+. ..||.|...++++.+.+... ...+.+. .+|++ . ..
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~-G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~-~---~~- 75 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQL-GLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGIS-G---EV- 75 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEE-E---CC-
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCC-C---CC-
Confidence 48999999999999999999999 9999999998 67887766666655443332 1112222 22332 0 00
Q ss_pred EEecH----------HHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeE
Q 020815 165 VIKHA----------ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVV 234 (321)
Q Consensus 165 ~~~~~----------~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~V 234 (321)
..... ..+...+.+.+. +.|++++.++.+. .+++.+ .+.+. +++..++++|+|
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~gv~~~~g~~~~---id~~~v-~V~~~------------~G~~~~~~~d~l 138 (464)
T 2a8x_A 76 TFDYGIAYDRSRKVAEGRVAGVHFLMK-KNKITEIHGYGTF---ADANTL-LVDLN------------DGGTESVTFDNA 138 (464)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHH-HTTCEEECEEEEE---SSSSEE-EEEET------------TSCCEEEEEEEE
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHH-hCCCEEEEeEEEE---ecCCeE-EEEeC------------CCceEEEEcCEE
Confidence 01100 112233344444 5799999886543 244432 22221 112267999999
Q ss_pred EEcCCCCC
Q 020815 235 VSSCGHDG 242 (321)
Q Consensus 235 I~AtG~~~ 242 (321)
|+|||..+
T Consensus 139 ViAtG~~~ 146 (464)
T 2a8x_A 139 IIATGSST 146 (464)
T ss_dssp EECCCEEE
T ss_pred EECCCCCC
Confidence 99999654
No 136
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.00 E-value=1.8e-09 Score=102.51 Aligned_cols=40 Identities=23% Similarity=0.333 Sum_probs=37.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCcc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA 130 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~ 130 (321)
+|||+|||+|++|+++|+.|++. |++|++||+++..||.+
T Consensus 20 ~~dv~iiG~G~~g~~~a~~l~~~-g~~v~~~e~~~~~Gg~~ 59 (475)
T 3p1w_A 20 HYDVIILGTGLKECILSGLLSHY-GKKILVLDRNPYYGGET 59 (475)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCGGG
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCcEEEEeccCCCCCCc
Confidence 69999999999999999999999 99999999998888653
No 137
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.99 E-value=5.8e-10 Score=105.83 Aligned_cols=51 Identities=24% Similarity=0.438 Sum_probs=45.4
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhc
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVV 142 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~ 142 (321)
|||+|||||++|+++|+.|++. |++|+|||+.+.+||.|.+.++.+.+.+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~-g~~V~lie~~~~~GG~~~~~g~~p~k~l~ 52 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQL-GMKVGVVEKEKALGGTCLRVGCIPSKALL 52 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSSSHHHHHHSHHHHHHHH
T ss_pred CCEEEECCChhHHHHHHHHHHC-CCeEEEEeCCCCCCCccceecchhHHHHH
Confidence 7999999999999999999999 99999999998899988877777665443
No 138
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.99 E-value=1.6e-09 Score=102.52 Aligned_cols=40 Identities=30% Similarity=0.623 Sum_probs=36.8
Q ss_pred cccEEEECCChHHHHHHHHhhcCCC------CeEEEEeccCCCCCcc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPN------IQIAIIEQSVSPGGGA 130 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G------~~V~liEk~~~~gg~~ 130 (321)
.+||+|||||++||+||++|++. | .+|+|+|+.+.+||.+
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~-G~~~~~~~~V~vlEa~~~~GG~~ 50 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKE-IKEKNLPLELTLVEASPRVGGKI 50 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-HTTTTCSEEEEEECSSSSSCTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHHh-ccccCCCCCEEEEECCCCCCceE
Confidence 47999999999999999999998 8 9999999998888754
No 139
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.98 E-value=2.7e-09 Score=103.11 Aligned_cols=114 Identities=17% Similarity=0.300 Sum_probs=76.8
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEec
Q 020815 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKH 168 (321)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~ 168 (321)
..+||+|||||++|+++|++|++. |++|+|||+. .||.+.....+.. + .+.+ ...
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~-G~~v~lie~~--~GG~~~~~~~~~~-~------------~~~~---------~~~ 265 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARK-GIRTGLMGER--FGGQVLDTVDIEN-Y------------ISVP---------KTE 265 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSS--TTGGGTTCSCBCC-B------------TTBS---------SBC
T ss_pred CcccEEEECCcHHHHHHHHHHHhC-CCeEEEEECC--CCCcccccccccc-c------------CCCC---------CCC
Confidence 468999999999999999999999 9999999973 5554331111000 0 0000 123
Q ss_pred HHHHHHHHHHHHHcCCCcEEEcCceEEEEEEEC--CEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 169 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG--GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 169 ~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~--~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
...+...+.+.+. +.|++++.+++|+.+..+. +....|.+. ++.++++|.||+|||...
T Consensus 266 ~~~l~~~l~~~~~-~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~--------------~g~~~~~d~vVlAtG~~~ 326 (521)
T 1hyu_A 266 GQKLAGALKAHVS-DYDVDVIDSQSASKLVPAATEGGLHQIETA--------------SGAVLKARSIIIATGAKW 326 (521)
T ss_dssp HHHHHHHHHHHHH-TSCEEEECSCCEEEEECCSSTTSCEEEEET--------------TSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHH-HcCCEEEcCCEEEEEEeccCCCceEEEEEC--------------CCCEEEcCEEEECCCCCc
Confidence 4566667666665 6799999999999986532 212233332 125799999999999643
No 140
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.97 E-value=2.2e-09 Score=102.20 Aligned_cols=129 Identities=16% Similarity=0.170 Sum_probs=78.4
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccch-HHHHH---HHcCCCcccC-CCeE
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKP-AHIFL---DELGIDYDEQ-DNYV 164 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~-~~~~l---~~~g~~~~~~-~~~~ 164 (321)
+|||+|||||++|+++|++|++. |++|+|||++ ..||.|.+.+|++.+.+.... ....+ ..+|+..... .++.
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~-g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~ 81 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAF-GKRVALIESK-ALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTLDWP 81 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---CCHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhC-CCcEEEEcCC-CCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCcCHH
Confidence 58999999999999999999998 9999999998 688888877777766554322 11122 2334332210 0110
Q ss_pred E-EecHHHHH----HHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCC
Q 020815 165 V-IKHAALFT----STIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCG 239 (321)
Q Consensus 165 ~-~~~~~~~~----~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG 239 (321)
. ......+. ..+.+.+ ++.|++++.+. ++.+ +...+ .+ + ..++++|++|+|||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~-~~~gv~~~~g~-~~~i--~~~~v---~~-~--------------g~~~~~d~lviAtG 139 (463)
T 2r9z_A 82 RLVAGRDRYIGAINSFWDGYV-ERLGITRVDGH-ARFV--DAHTI---EV-E--------------GQRLSADHIVIATG 139 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHTTCEEEESC-EEEE--ETTEE---EE-T--------------TEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHCCCEEEEeE-EEEc--cCCEE---EE-C--------------CEEEEcCEEEECCC
Confidence 0 00111111 2222223 35799999884 3332 34332 22 1 15789999999999
Q ss_pred CCC
Q 020815 240 HDG 242 (321)
Q Consensus 240 ~~~ 242 (321)
...
T Consensus 140 s~p 142 (463)
T 2r9z_A 140 GRP 142 (463)
T ss_dssp EEE
T ss_pred CCC
Confidence 643
No 141
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.97 E-value=3.1e-10 Score=109.01 Aligned_cols=138 Identities=17% Similarity=0.200 Sum_probs=79.9
Q ss_pred cccEEEECCChHHHHHHHHhhc-CCCCeEEEEe--------ccCCCCCccccCcccchhhhccchH----HHHHHHcCCC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSK-NPNIQIAIIE--------QSVSPGGGAWLGGQLFSAMVVRKPA----HIFLDELGID 156 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~-~~G~~V~liE--------k~~~~gg~~~~~g~~~~~~~~~~~~----~~~l~~~g~~ 156 (321)
+|||+|||||++|+++|+.|++ . |++|+||| +...+||.|.+.+|++.+.+..... .+....+|+.
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~-G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~ 85 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLY-GKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWE 85 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHH-CCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred ccCEEEECCChhHHHHHHHHHHhc-CCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCcc
Confidence 5899999999999999999999 9 99999999 3457888888888877765544321 1222334443
Q ss_pred cccC---CCeEE-EecHHH----HHHHHHHHHHcCC-CcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCce
Q 020815 157 YDEQ---DNYVV-IKHAAL----FTSTIMSKLLARP-NVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPN 227 (321)
Q Consensus 157 ~~~~---~~~~~-~~~~~~----~~~~l~~~~~~~~-gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~ 227 (321)
.... .++.. ...... +...+...+. +. +++++.++ ++.+ ++..+ .+.. ..+.......
T Consensus 86 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~-~~~gv~~~~g~-~~~i--~~~~v---~v~~------~~~~~~~~~~ 152 (495)
T 2wpf_A 86 FDGSSVKANWKKLIAAKNEAVLDINKSYEGMFN-DTEGLDFFLGW-GSLE--SKNVV---VVRE------TADPKSAVKE 152 (495)
T ss_dssp CCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHH-HCTTEEEEESE-EEEE--ETTEE---EEES------SSSTTSCEEE
T ss_pred cCCcccccCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCeEEEEeE-EEEe--eCCEE---EEee------cCCccCCCCe
Confidence 2110 00000 000111 1122222333 45 99999884 4433 44432 2210 0000000036
Q ss_pred EEEcCeEEEcCCCC
Q 020815 228 VMEAKVVVSSCGHD 241 (321)
Q Consensus 228 ~i~a~~VI~AtG~~ 241 (321)
++.+|++|+|||..
T Consensus 153 ~~~~d~lViATGs~ 166 (495)
T 2wpf_A 153 RLQADHILLATGSW 166 (495)
T ss_dssp EEEEEEEEECCCEE
T ss_pred EEEcCEEEEeCCCC
Confidence 79999999999964
No 142
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.96 E-value=4.2e-09 Score=100.20 Aligned_cols=45 Identities=31% Similarity=0.480 Sum_probs=37.0
Q ss_pred cccCCcccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCcc
Q 020815 85 MITYADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA 130 (321)
Q Consensus 85 ~~~~~~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~ 130 (321)
|+....+||+|||||++|+++|+.|++. |.+|+|+|++..+||.+
T Consensus 11 ~~~~~~~~v~iiG~G~~Gl~aa~~l~~~-g~~v~v~E~~~~~GGr~ 55 (478)
T 2ivd_A 11 MPRTTGMNVAVVGGGISGLAVAHHLRSR-GTDAVLLESSARLGGAV 55 (478)
T ss_dssp ------CCEEEECCBHHHHHHHHHHHTT-TCCEEEECSSSSSBTTC
T ss_pred CCCCCCCcEEEECCCHHHHHHHHHHHHC-CCCEEEEEcCCCCCcee
Confidence 4444578999999999999999999999 99999999999888765
No 143
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.96 E-value=1.1e-09 Score=100.60 Aligned_cols=37 Identities=30% Similarity=0.534 Sum_probs=33.7
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPG 127 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~g 127 (321)
++||+|||||++|+++|++|++. |.+|+|||+.....
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~-G~~V~vle~~~~~~ 42 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARK-GYSVHILARDLPED 42 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSCTTC
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCEEEEEeccCCCC
Confidence 68999999999999999999999 99999999976433
No 144
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.95 E-value=4.7e-10 Score=96.87 Aligned_cols=40 Identities=30% Similarity=0.547 Sum_probs=37.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCcc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA 130 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~ 130 (321)
++||+||||||+||+||+.|++. |++|+||||.+.+||..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~-G~~V~v~Ek~~~~GG~~ 41 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAA-GHQVHLFDKSRGSGGRM 41 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCCCCCCcc
Confidence 58999999999999999999999 99999999999888754
No 145
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.95 E-value=3.7e-09 Score=98.75 Aligned_cols=138 Identities=19% Similarity=0.223 Sum_probs=95.8
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.++|||+|..|+.+|..|.+. |.+|+++|+.+.+.... ...
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtvv~~~~~~~~~~-------------------------------------~~~ 184 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAK-GLEVDVVELAPRVMARV-------------------------------------VTP 184 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSTTTTT-------------------------------------SCH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCCcchhhc-------------------------------------cCH
Confidence 4799999999999999999999 99999999976431100 012
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCCCcchhhh
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK 250 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~~~~~~~~ 250 (321)
.+.+.+.+.+. +.|++++.++.++++..+++++.+|.+.+ +.++.||.||+|+|..... .
T Consensus 185 ~~~~~l~~~l~-~~GV~i~~~~~v~~i~~~~~~v~~V~~~d--------------G~~i~aD~Vv~a~G~~p~~-----~ 244 (404)
T 3fg2_P 185 EISSYFHDRHS-GAGIRMHYGVRATEIAAEGDRVTGVVLSD--------------GNTLPCDLVVVGVGVIPNV-----E 244 (404)
T ss_dssp HHHHHHHHHHH-HTTCEEECSCCEEEEEEETTEEEEEEETT--------------SCEEECSEEEECCCEEECC-----H
T ss_pred HHHHHHHHHHH-hCCcEEEECCEEEEEEecCCcEEEEEeCC--------------CCEEEcCEEEECcCCccCH-----H
Confidence 34444455554 67999999999999998888888888743 2689999999999954332 2
Q ss_pred hhhhcCCcccccCCceeecccccchhhcccccccccccccccchhhc
Q 020815 251 RLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEI 297 (321)
Q Consensus 251 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~g~~~~~~ 297 (321)
.+...++.. . .++..+. ..+...|++|++|+++...
T Consensus 245 l~~~~gl~~--~--~Gi~vd~-------~~~t~~~~iya~GD~a~~~ 280 (404)
T 3fg2_P 245 IAAAAGLPT--A--AGIIVDQ-------QLLTSDPHISAIGDCALFE 280 (404)
T ss_dssp HHHHTTCCB--S--SSEEECT-------TSBCSSTTEEECGGGEEEE
T ss_pred HHHhCCCCC--C--CCEEECC-------CcccCCCCEEEeecceeec
Confidence 233334311 1 2233332 2234579999999987543
No 146
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.94 E-value=2.2e-10 Score=106.15 Aligned_cols=124 Identities=17% Similarity=0.093 Sum_probs=75.8
Q ss_pred cEEEECCChHHHHHHHHhhcC-CCCeEEEEeccCCC---CCccccCcccchhhhccchHH-HH-HHH------------c
Q 020815 92 DVVVVGAGSAGLSCAYELSKN-PNIQIAIIEQSVSP---GGGAWLGGQLFSAMVVRKPAH-IF-LDE------------L 153 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~-~G~~V~liEk~~~~---gg~~~~~g~~~~~~~~~~~~~-~~-l~~------------~ 153 (321)
||+|||||++|+++|+.|++. ||++|+|+|+.+.+ |.+....+..... ....... +. +.. .
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQH-PANPLSYLDAPERLNPQFLEDFKLVHH 80 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTC-TTCGGGGSSCGGGGCCEEECCEEEEES
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHh-hcCcchhhhhhHHHhhccccceEEEeC
Confidence 899999999999999999984 48999999998765 3221111110000 0000000 00 000 1
Q ss_pred CCCcccC-CCeEEEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcC
Q 020815 154 GIDYDEQ-DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAK 232 (321)
Q Consensus 154 g~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~ 232 (321)
|..+... +......+...+.+.|.+.+.+ .|++++++++|+++... .+++||
T Consensus 81 g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~-~gv~i~~~~~v~~i~~~--------------------------~~~~ad 133 (381)
T 3c4a_A 81 NEPSLMSTGVLLCGVERRGLVHALRDKCRS-QGIAIRFESPLLEHGEL--------------------------PLADYD 133 (381)
T ss_dssp SSEEECCCCSCEEEEEHHHHHHHHHHHHHH-TTCEEETTCCCCSGGGC--------------------------CGGGCS
T ss_pred CeeEEecCCCceeeecHHHHHHHHHHHHHH-CCCEEEeCCEeccchhc--------------------------ccccCC
Confidence 1111111 1122355678888998888874 59999999988776310 125789
Q ss_pred eEEEcCCCCCC
Q 020815 233 VVVSSCGHDGP 243 (321)
Q Consensus 233 ~VI~AtG~~~~ 243 (321)
.||+|+|..+.
T Consensus 134 ~vV~AdG~~S~ 144 (381)
T 3c4a_A 134 LVVLANGVNHK 144 (381)
T ss_dssp EEEECCGGGGG
T ss_pred EEEECCCCCch
Confidence 99999996654
No 147
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.92 E-value=1.3e-08 Score=97.29 Aligned_cols=40 Identities=28% Similarity=0.508 Sum_probs=37.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCcc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA 130 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~ 130 (321)
++||+|||||++|++||+.|++. |++|+|+|+++.+||.+
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~-g~~v~v~E~~~~~GGr~ 78 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVA-GFKTLLLEARDRIGGRS 78 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSBSBTTC
T ss_pred CCCEEEECCcHHHHHHHHHHHHC-CCCEEEEeCCCCCCCcc
Confidence 48999999999999999999999 99999999999888764
No 148
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.91 E-value=2.9e-09 Score=104.49 Aligned_cols=136 Identities=18% Similarity=0.246 Sum_probs=78.0
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEecc-C-------CCCCccccCcccchhhhccch----HHHHHHHcCCC
Q 020815 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS-V-------SPGGGAWLGGQLFSAMVVRKP----AHIFLDELGID 156 (321)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~-~-------~~gg~~~~~g~~~~~~~~~~~----~~~~l~~~g~~ 156 (321)
..|||+|||||++|+++|..|++. |++|+|||+. + ..||.|++.++++...+.... ....+..+|+.
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~-g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~~ 184 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKY-GAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWS 184 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ccccEEEECCCccHHHHHHHHHhC-CCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCcc
Confidence 469999999999999999999999 9999999973 2 256666666666655443321 22345566765
Q ss_pred cccC---CCeEEE-ecHHHHHHH----HHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceE
Q 020815 157 YDEQ---DNYVVI-KHAALFTST----IMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNV 228 (321)
Q Consensus 157 ~~~~---~~~~~~-~~~~~~~~~----l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~ 228 (321)
+... .++... .....+... +...+ +..+++++.+. +..+ +...+. +.. .+|+..+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~V~~~~~~-~~~~--~~~~v~-v~~------------~~g~~~~ 247 (598)
T 2x8g_A 185 LDRSKISHNWSTMVEGVQSHIGSLNWGYKVAL-RDNQVTYLNAK-GRLI--SPHEVQ-ITD------------KNQKVST 247 (598)
T ss_dssp CCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHH-HHTTCEEECSE-EEEE--ETTEEE-EEC------------TTCCEEE
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHH-hhCCcEEEEEE-EEEc--CCCEEE-EEe------------CCCCeEE
Confidence 4321 111000 000111111 11122 24688888763 3222 333221 111 1112257
Q ss_pred EEcCeEEEcCCCCC
Q 020815 229 MEAKVVVSSCGHDG 242 (321)
Q Consensus 229 i~a~~VI~AtG~~~ 242 (321)
+.+|+||+|||...
T Consensus 248 ~~~d~lviAtGs~p 261 (598)
T 2x8g_A 248 ITGNKIILATGERP 261 (598)
T ss_dssp EEEEEEEECCCEEE
T ss_pred EEeCEEEEeCCCCC
Confidence 89999999999643
No 149
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.91 E-value=1.7e-09 Score=105.33 Aligned_cols=37 Identities=43% Similarity=0.693 Sum_probs=33.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSP 126 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~ 126 (321)
+||+||||||.+|+.+|.+|++.++.+|+|||++...
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 5899999999999999999999549999999997643
No 150
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.91 E-value=2.9e-10 Score=104.00 Aligned_cols=41 Identities=29% Similarity=0.423 Sum_probs=35.0
Q ss_pred cEEEECCChHHHHHHHHhhcCCC------CeEEEEeccCCCCCccccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPN------IQIAIIEQSVSPGGGAWLG 133 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G------~~V~liEk~~~~gg~~~~~ 133 (321)
||+|||||++|+++|++|++. | .+|+|||+....++.+...
T Consensus 2 dVvIIGgGi~Gls~A~~La~~-G~~~~p~~~V~vlE~~~~~~~aS~~~ 48 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHER-YHSVLQPLDIKVYADRFTPLTTTDVA 48 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-HTTTSSSCEEEEEESSCGGGSGGGTC
T ss_pred cEEEECCCHHHHHHHHHHHHh-ccccCCCceEEEEECCCCCCCccccC
Confidence 899999999999999999998 7 9999999986555544433
No 151
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.90 E-value=9.4e-09 Score=99.08 Aligned_cols=40 Identities=33% Similarity=0.576 Sum_probs=37.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCcc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA 130 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~ 130 (321)
.+||+|||||++|++||+.|++. |++|+|+|+++.+||.+
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~-G~~V~vlE~~~~~GGr~ 43 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDS-GLNVVVLEARDRVGGRT 43 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSSSBTTC
T ss_pred CceEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCCCCCce
Confidence 57999999999999999999999 99999999999888765
No 152
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.89 E-value=1.2e-08 Score=97.92 Aligned_cols=137 Identities=15% Similarity=0.144 Sum_probs=83.0
Q ss_pred cccEEEECCChHHHHHHHHhhcC-------------CCCeEEEEeccCCCCCccccCcccchhh----------h--cc-
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKN-------------PNIQIAIIEQSVSPGGGAWLGGQLFSAM----------V--VR- 143 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~-------------~G~~V~liEk~~~~gg~~~~~g~~~~~~----------~--~~- 143 (321)
-|||||||+|++||++|+.|.+. ++..++.+|+.+..+ |..+.++... . .+
T Consensus 39 i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~---Wh~g~~~p~~~~q~~fl~Dlvtl~~P 115 (501)
T 4b63_A 39 LHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFA---WHSGMLVPGSKMQISFIKDLATLRDP 115 (501)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCC---SSGGGCCTTCBCSSCGGGSSSTTTCT
T ss_pred cCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCC---cCCCCCCCCccccccchhhhccccCC
Confidence 48999999999999999998753 145677888876544 4444322110 0 00
Q ss_pred ---chHHHHHHHcCCC--cccCCCeEEEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECC-------EEEEEEEee
Q 020815 144 ---KPAHIFLDELGID--YDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG-------RVGGVVTNW 211 (321)
Q Consensus 144 ---~~~~~~l~~~g~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~-------~v~gv~~~~ 211 (321)
.....+|.+.+-- |.....+ .....++.++|...+. +.+..++++++|+++...+. ...-|.+.+
T Consensus 116 ~s~~sf~~yl~~~~rl~~f~~~~~~--~p~r~E~~~Yl~~~A~-~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~ 192 (501)
T 4b63_A 116 RSSFTFLNYLHQKGRLIHFTNLSTF--LPARLEFEDYMRWCAQ-QFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRN 192 (501)
T ss_dssp TCTTSHHHHHHHHTCHHHHHTTCCS--CCBHHHHHHHHHHHHH-TTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEE
T ss_pred CCccchHHHHHHhCCccCCccccCC--CCCHHHHHHHHHHHHH-HcCCceEcceEEEeeccccccccccccceEEEEEec
Confidence 0123455544421 1111111 1234566666554444 67788999999999987642 134444433
Q ss_pred cceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 212 ALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 212 ~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
+ .+++..++.|+.||+|+|..
T Consensus 193 ~---------~~g~~~~~~ar~vVlatG~~ 213 (501)
T 4b63_A 193 V---------ETGEISARRTRKVVIAIGGT 213 (501)
T ss_dssp T---------TTCCEEEEEEEEEEECCCCE
T ss_pred C---------CCceEEEEEeCEEEECcCCC
Confidence 1 23356789999999999964
No 153
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.88 E-value=5.5e-09 Score=102.92 Aligned_cols=39 Identities=31% Similarity=0.446 Sum_probs=35.8
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGG 129 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~ 129 (321)
+|||||||||++|+++|+.|++. |++|+|||+....+|.
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~~-G~~V~liE~~~~~gg~ 84 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVGA-GYKVAMFDIGEIDSGL 84 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCCCSSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhC-CCcEEEEeccCCCCCc
Confidence 68999999999999999999999 9999999998776653
No 154
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.84 E-value=5.9e-09 Score=99.99 Aligned_cols=111 Identities=28% Similarity=0.351 Sum_probs=76.2
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecH
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 169 (321)
.+||+|||||++|+++|++|++. .+|+|||+++.+||..+...... +|++ . ..
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~--~~V~vie~~~~~GG~~~~~~~~~---------------~g~~------~----~~ 160 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY--LTVALIEERGWLGGDMWLKGIKQ---------------EGFN------K----DS 160 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT--CCEEEECTTSSSSCSGGGTCSEE---------------TTTT------E----EH
T ss_pred cCCEEEECccHHHHHHHHHHHhc--CCEEEEeCCCCCCCeeecccccc---------------CCCC------C----CH
Confidence 58999999999999999999997 99999999988877654211000 1111 0 23
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
.++...+.+.+ ..+++++.++.+.++..+++.+....... ++..++.+|++|+|||..
T Consensus 161 ~~~~~~l~~~l--~~~v~~~~~~~v~~i~~~~~~~~~~~~~~------------~~~~~~~~d~lvlAtGa~ 218 (493)
T 1y56_A 161 RKVVEELVGKL--NENTKIYLETSALGVFDKGEYFLVPVVRG------------DKLIEILAKRVVLATGAI 218 (493)
T ss_dssp HHHHHHHHHTC--CTTEEEETTEEECCCEECSSSEEEEEEET------------TEEEEEEESCEEECCCEE
T ss_pred HHHHHHHHHHH--hcCCEEEcCCEEEEEEcCCcEEEEEEecC------------CeEEEEECCEEEECCCCC
Confidence 44445555444 56999999999988877665433222111 122478999999999964
No 155
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.83 E-value=1.7e-08 Score=104.21 Aligned_cols=124 Identities=19% Similarity=0.219 Sum_probs=79.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecH
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 169 (321)
++||||||||++|+++|+.|++. |++|+|||+.+.+||.++. . .+.... . ...
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~-G~~V~lie~~~~~GG~~~~-~---~k~~i~------------------~----~~~ 180 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRS-GARVMLLDERAEAGGTLLD-T---AGEQID------------------G----MDS 180 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSSGGGGG-S---SCCEET------------------T----EEH
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCcEEEEeCCCCCCceecc-C---CccccC------------------C----CCH
Confidence 58999999999999999999999 9999999999888876652 1 000000 0 012
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCC-CCCCCceEEEcCeEEEcCCCC
Q 020815 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDT-QSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~-~~~g~~~~i~a~~VI~AtG~~ 241 (321)
.++...+.+++.+..+++++.+++|..+. .++.+..+............. ..+.+..++.+|+||+|||..
T Consensus 181 ~~~~~~~~~~l~~~~~v~~~~~~~V~~i~-~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~ 252 (965)
T 2gag_A 181 SAWIEQVTSELAEAEETTHLQRTTVFGSY-DANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAH 252 (965)
T ss_dssp HHHHHHHHHHHHHSTTEEEESSEEEEEEE-TTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHhhcCCcEEEeCCEEEeee-cCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCc
Confidence 34455566666655699999999998875 344444433211000010000 000122479999999999964
No 156
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.82 E-value=1.6e-08 Score=96.61 Aligned_cols=138 Identities=18% Similarity=0.241 Sum_probs=89.9
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecH
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 169 (321)
..+|+|||+|..|+.+|..|++. |.+|+|+|+.+.+... + .
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~---------------------------~-----------~ 226 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVEL-GKKVRMIERNDHIGTI---------------------------Y-----------D 226 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHT-TCEEEEECCGGGTTSS---------------------------S-----------C
T ss_pred CCeEEEECCCHHHHHHHHHHHhc-CCeEEEEEeCCchhhc---------------------------C-----------C
Confidence 35899999999999999999999 9999999997532110 0 0
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCCCcchhh
Q 020815 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGV 249 (321)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~~~~~~~ 249 (321)
..+.+.+.+.+. +.|++++.+++++++..+ +++..+.+. ..++.+|.||+|+|.....
T Consensus 227 ~~~~~~l~~~l~-~~Gv~i~~~~~v~~i~~~-~~v~~v~~~---------------~~~i~~D~vi~a~G~~p~~----- 284 (480)
T 3cgb_A 227 GDMAEYIYKEAD-KHHIEILTNENVKAFKGN-ERVEAVETD---------------KGTYKADLVLVSVGVKPNT----- 284 (480)
T ss_dssp HHHHHHHHHHHH-HTTCEEECSCCEEEEEES-SBEEEEEET---------------TEEEECSEEEECSCEEESC-----
T ss_pred HHHHHHHHHHHH-HcCcEEEcCCEEEEEEcC-CcEEEEEEC---------------CCEEEcCEEEECcCCCcCh-----
Confidence 234445555554 579999999999998754 555555542 2579999999999954332
Q ss_pred hhhhhcCCcccccCCceeecccccchhhcccccccccccccccchhhc
Q 020815 250 KRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEI 297 (321)
Q Consensus 250 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~g~~~~~~ 297 (321)
..+...+.. +.....+.++. +.+...|++|++|+++...
T Consensus 285 ~~l~~~g~~--~~~~G~I~Vd~-------~~~ts~p~IyA~GD~~~~~ 323 (480)
T 3cgb_A 285 DFLEGTNIR--TNHKGAIEVNA-------YMQTNVQDVYAAGDCATHY 323 (480)
T ss_dssp GGGTTSCCC--BCTTSCBCCCT-------TSBCSSTTEEECGGGBCEE
T ss_pred HHHHhCCcc--cCCCCCEEECC-------CccCCCCCEEEeeeEEEec
Confidence 122222220 11111122222 2234579999999987543
No 157
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.81 E-value=6.6e-08 Score=86.70 Aligned_cols=101 Identities=18% Similarity=0.214 Sum_probs=76.1
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.|+|||+|..|+.+|..|++. |.+|+++++.+.+.. ..
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~~~----------------------------------------~~ 184 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNI-ASEVHLIHRRDGFRA----------------------------------------EK 184 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTT-SSEEEEECSSSSCCC----------------------------------------CH
T ss_pred CeEEEECCCHHHHHHHHHHHhc-CCeEEEEEeCCcccc----------------------------------------CH
Confidence 5799999999999999999999 999999998753210 02
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCC-CCceEEEcCeEEEcCCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSC-MDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~-g~~~~i~a~~VI~AtG~~~ 242 (321)
.+.+.+.+.+. +.|++++.+++++++..+++++.+|.+.+. .+ ++..++.+|.||+|+|...
T Consensus 185 ~~~~~l~~~l~-~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~---------~~~g~~~~i~~D~vv~a~G~~p 247 (320)
T 1trb_A 185 ILIKRLMDKVE-NGNIILHTNRTLEEVTGDQMGVTGVRLRDT---------QNSDNIESLDVAGLFVAIGHSP 247 (320)
T ss_dssp HHHHHHHHHHH-TSSEEEECSCEEEEEEECSSSEEEEEEECC---------TTCCCCEEEECSEEEECSCEEE
T ss_pred HHHHHHHHhcc-cCCeEEEcCceeEEEEcCCCceEEEEEEec---------cCCCceEEEEcCEEEEEeCCCC
Confidence 23344555554 689999999999999877767777776421 01 2346899999999999443
No 158
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.80 E-value=3.6e-08 Score=93.24 Aligned_cols=98 Identities=27% Similarity=0.372 Sum_probs=72.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecH
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 169 (321)
..+++|||+|++|+.+|..|++. |.+|+|+|+.+.+.... + .
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~~--------------------------~-----------~ 190 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKA-GKKVTVIDILDRPLGVY--------------------------L-----------D 190 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSTTTTT--------------------------C-----------C
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCeEEEEecCccccccc--------------------------C-----------C
Confidence 46999999999999999999999 99999999976432100 0 1
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
..+.+.+.+.+. +.|++++.++.++++..+ +++..+.+. ..++.+|.||+|+|...
T Consensus 191 ~~~~~~l~~~l~-~~gv~i~~~~~v~~i~~~-~~v~~v~~~---------------~~~i~~d~vi~a~G~~p 246 (447)
T 1nhp_A 191 KEFTDVLTEEME-ANNITIATGETVERYEGD-GRVQKVVTD---------------KNAYDADLVVVAVGVRP 246 (447)
T ss_dssp HHHHHHHHHHHH-TTTEEEEESCCEEEEECS-SBCCEEEES---------------SCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHH-hCCCEEEcCCEEEEEEcc-CcEEEEEEC---------------CCEEECCEEEECcCCCC
Confidence 234455555565 689999999999998754 444344431 25799999999999543
No 159
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=98.79 E-value=8.3e-09 Score=100.18 Aligned_cols=59 Identities=27% Similarity=0.334 Sum_probs=43.9
Q ss_pred HHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEE---EcCeEEEcCCCCC
Q 020815 175 TIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVM---EAKVVVSSCGHDG 242 (321)
Q Consensus 175 ~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i---~a~~VI~AtG~~~ 242 (321)
.+++.+.+..|++++.++.|++|+.+++++.||++.. . .+|+..++ .+|.||+|+|+.+
T Consensus 200 ~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~gV~~~~------~---~~g~~~~~~v~~~~~VIlaaG~~~ 261 (546)
T 1kdg_A 200 TYLQTALARPNFTFKTNVMVSNVVRNGSQILGVQTND------P---TLGPNGFIPVTPKGRVILSAGAFG 261 (546)
T ss_dssp THHHHHHTCTTEEEECSCCEEEEEEETTEEEEEEESC------T---TSSGGGEEEEEEEEEEEECSHHHH
T ss_pred HHHHHHhhCCCcEEEeCCEEEEEEEeCCEEEEEEEEe------c---CCCceeEEEEEeCCEEEEcCChhc
Confidence 3566666567999999999999999989999998843 0 01222233 7899999999653
No 160
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.79 E-value=7.4e-09 Score=96.92 Aligned_cols=136 Identities=13% Similarity=0.125 Sum_probs=91.0
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.|+|||+|..|+.+|..|++. |.+|+++|+.+.+... . ...
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtvv~~~~~~l~~-------------------~------------------~~~ 185 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKL-GLSVTILEAGDELLVR-------------------V------------------LGR 185 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSSHH-------------------H------------------HCH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEecCCccchh-------------------h------------------cCH
Confidence 5899999999999999999999 9999999997542100 0 002
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCCCcchhhh
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK 250 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~~~~~~~~ 250 (321)
.+.+.+.+.+. +.|++++.++.++++..++ ++.+|.+.+ +.++.||.||+|+|..... .
T Consensus 186 ~~~~~l~~~l~-~~GV~i~~~~~v~~i~~~~-~~~~v~~~d--------------g~~i~aD~Vv~a~G~~p~~-----~ 244 (410)
T 3ef6_A 186 RIGAWLRGLLT-ELGVQVELGTGVVGFSGEG-QLEQVMASD--------------GRSFVADSALICVGAEPAD-----Q 244 (410)
T ss_dssp HHHHHHHHHHH-HHTCEEECSCCEEEEECSS-SCCEEEETT--------------SCEEECSEEEECSCEEECC-----H
T ss_pred HHHHHHHHHHH-HCCCEEEeCCEEEEEeccC-cEEEEEECC--------------CCEEEcCEEEEeeCCeecH-----H
Confidence 33344444444 5799999999999987543 555666632 3689999999999954332 2
Q ss_pred hhhhcCCcccccCCceeecccccchhhcccccccccccccccchhh
Q 020815 251 RLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAE 296 (321)
Q Consensus 251 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~g~~~~~ 296 (321)
.+...++.. . .++.++. +.+...|++|++|+++..
T Consensus 245 l~~~~gl~~--~--~gi~vd~-------~~~t~~~~IyA~GD~a~~ 279 (410)
T 3ef6_A 245 LARQAGLAC--D--RGVIVDH-------CGATLAKGVFAVGDVASW 279 (410)
T ss_dssp HHHHTTCCB--S--SSEECCT-------TSBCSSTTEEECGGGEEE
T ss_pred HHHhCCCcc--C--CeEEEcc-------CeeECCCCEEEEEcceec
Confidence 234444311 1 2233332 223467999999998754
No 161
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.78 E-value=1.8e-08 Score=92.63 Aligned_cols=104 Identities=18% Similarity=0.193 Sum_probs=64.4
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhh-----------cc-chHHHHHHHcCCCcc
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMV-----------VR-KPAHIFLDELGIDYD 158 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~-----------~~-~~~~~~l~~~g~~~~ 158 (321)
+||+|||||++|+.+|++|++. |.+|+|||++...+......+.+. .+. .. ....+.++.+|-..-
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~-G~~V~liE~~~~~~tp~h~~d~i~-eL~CnpSigG~~~~~akGlL~~EIdaLGg~m~ 79 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRL-GVPVRLFEMRPKRMTPAHGTDRFA-EIVCSNSLGGEGETNAKGLLQAEMRRAGSLVM 79 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEECCTTTSCCSSCCSSCTT-CCCSCCEEEECSTTCHHHHHHHHHHHHTCHHH
T ss_pred CCEEEECchHHHHHHHHHHHHC-CCcEEEEeccCCcCCccccCCCcc-ccccCcCCCccccccchhHHHHHHHHcCChHh
Confidence 5999999999999999999999 999999999764332211111100 000 00 012334444433211
Q ss_pred c-------CCCeEEEecHHHHHHHHHHHHHcCCCcEEEcCceEEEE
Q 020815 159 E-------QDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDL 197 (321)
Q Consensus 159 ~-------~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l 197 (321)
. ........+...|...+.+.+.+.++++++.+ +|++|
T Consensus 80 ~~aD~~~ipAg~al~vDR~~f~~~~~~~le~~pni~l~q~-eV~~l 124 (443)
T 3g5s_A 80 EAADLARVPAGGALAVDREEFSGYITERLTGHPLLEVVRE-EVREI 124 (443)
T ss_dssp HHHHHSEECCTTEEEECHHHHHHHHHHHHHTCTTEEEECS-CCCSC
T ss_pred hhhhhcCCCCCccccCCcHHHHHHHHHHHHcCCCeEEEhh-hhhhh
Confidence 0 01222345678888899999998899999865 44443
No 162
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.78 E-value=7e-08 Score=86.99 Aligned_cols=99 Identities=10% Similarity=0.138 Sum_probs=75.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecH
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 169 (321)
.-.++|||+|..|+.+|..|++. |.+|.++++...+..
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~-g~~v~~v~~~~~~~~----------------------------------------- 210 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKY-GSKVFMLVRKDHLRA----------------------------------------- 210 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTT-SSEEEEECSSSSCCS-----------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhc-CCEEEEEEcCCccCC-----------------------------------------
Confidence 35799999999999999999999 999999998753210
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
...+.+++.+..|++++.++.++++..+++++.+|.+.+. .+++..++.+|.||+|+|...
T Consensus 211 ---~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~---------~~g~~~~i~~D~vi~a~G~~p 271 (338)
T 3itj_A 211 ---STIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNT---------KKNEETDLPVSGLFYAIGHTP 271 (338)
T ss_dssp ---CHHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEET---------TTTEEEEEECSEEEECSCEEE
T ss_pred ---CHHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEEC---------CCCceEEEEeCEEEEEeCCCC
Confidence 1233445544569999999999999887777777777531 112347899999999999443
No 163
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.78 E-value=4.6e-08 Score=92.94 Aligned_cols=39 Identities=31% Similarity=0.579 Sum_probs=36.2
Q ss_pred cccEEEECCChHHHHHHHHhhcCCC--CeEEEEeccCCCCCc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPN--IQIAIIEQSVSPGGG 129 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G--~~V~liEk~~~~gg~ 129 (321)
.+||+|||||++|+++|++|++. | .+|+|+|+...+||.
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~-g~~~~v~v~E~~~~~GG~ 44 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERA-FPDLNITLLEAGERLGGK 44 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHH-CTTSEEEEECSSSSSBTT
T ss_pred cccEEEECCCHHHHHHHHHHHHh-CCCCCEEEEECCCCCCce
Confidence 47999999999999999999998 8 999999998888774
No 164
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.77 E-value=4.1e-08 Score=90.95 Aligned_cols=135 Identities=17% Similarity=0.188 Sum_probs=91.0
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-+++|||+|..|+.+|..|++. |.+|+|+|+.+.+.... ...
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~~~~~-------------------------------------~~~ 187 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSG-GYQLDVVAPCEQVMPGL-------------------------------------LHP 187 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSSSTTT-------------------------------------SCH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEecCcchhhcc-------------------------------------cCH
Confidence 5899999999999999999999 99999999975422100 012
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCCCcchhhh
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK 250 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~~~~~~~~ 250 (321)
.+.+.+.+.+. +.|++++.+++++++..+++.+ .+.+. ++.++.+|.||+|+|..+.. .
T Consensus 188 ~~~~~l~~~l~-~~gv~i~~~~~v~~i~~~~~~~-~v~~~--------------~g~~i~~d~vv~a~G~~p~~-----~ 246 (384)
T 2v3a_A 188 AAAKAVQAGLE-GLGVRFHLGPVLASLKKAGEGL-EAHLS--------------DGEVIPCDLVVSAVGLRPRT-----E 246 (384)
T ss_dssp HHHHHHHHHHH-TTTCEEEESCCEEEEEEETTEE-EEEET--------------TSCEEEESEEEECSCEEECC-----H
T ss_pred HHHHHHHHHHH-HcCCEEEeCCEEEEEEecCCEE-EEEEC--------------CCCEEECCEEEECcCCCcCH-----H
Confidence 34455555555 6899999999999998776643 34432 22679999999999954432 1
Q ss_pred hhhhcCCcccccCCceeecccccchhhcccccccccccccccchh
Q 020815 251 RLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVA 295 (321)
Q Consensus 251 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~g~~~~ 295 (321)
.+.+.++.. . .++.++. +.+...|++|++|+++.
T Consensus 247 l~~~~g~~~--~--~gi~vd~-------~~~t~~~~IyA~GD~~~ 280 (384)
T 2v3a_A 247 LAFAAGLAV--N--RGIVVDR-------SLRTSHANIYALGDCAE 280 (384)
T ss_dssp HHHHTTCCB--S--SSEEECT-------TCBCSSTTEEECGGGEE
T ss_pred HHHHCCCCC--C--CCEEECC-------CCCCCCCCEEEeeeeee
Confidence 233444311 1 1233332 12345789999999874
No 165
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.77 E-value=1.1e-08 Score=103.05 Aligned_cols=38 Identities=34% Similarity=0.670 Sum_probs=35.9
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGG 128 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg 128 (321)
.+||+|||||++|+++|+.|++. |++|+|+|+...+||
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNF-GIKVTVLEAKDRIGG 373 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCcEEEEecccceec
Confidence 58999999999999999999999 999999999888877
No 166
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.76 E-value=7.6e-08 Score=90.65 Aligned_cols=137 Identities=15% Similarity=0.172 Sum_probs=91.9
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.|+|||+|..|+.+|..|++. |.+|+|+|+.+.+.... ...
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~-G~~Vtlv~~~~~~l~~~-------------------------------------~~~ 191 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKA-NMHVTLLDTAARVLERV-------------------------------------TAP 191 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSTTTTT-------------------------------------SCH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEEEEEeCCccccch-------------------------------------hhH
Confidence 4899999999999999999999 99999999975421100 002
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEE--ECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCCCcchh
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIV--KGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATG 248 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~--~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~~~~~~ 248 (321)
.+...+.+.+. +.|++++.++.++++.. +++++..|.+.+ +.++.+|.||+|+|.....
T Consensus 192 ~~~~~l~~~l~-~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~--------------G~~i~~D~Vv~a~G~~p~~---- 252 (431)
T 1q1r_A 192 PVSAFYEHLHR-EAGVDIRTGTQVCGFEMSTDQQKVTAVLCED--------------GTRLPADLVIAGIGLIPNC---- 252 (431)
T ss_dssp HHHHHHHHHHH-HHTCEEECSCCEEEEEECTTTCCEEEEEETT--------------SCEEECSEEEECCCEEECC----
T ss_pred HHHHHHHHHHH-hCCeEEEeCCEEEEEEeccCCCcEEEEEeCC--------------CCEEEcCEEEECCCCCcCc----
Confidence 23344444454 57999999999999986 456776776632 2679999999999944321
Q ss_pred hhhhhhcCCcccccCCceeecccccchhhcccccccccccccccchhh
Q 020815 249 VKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAE 296 (321)
Q Consensus 249 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~g~~~~~ 296 (321)
..+...++. +. .++.++. +.+...|++|+.|+++..
T Consensus 253 -~l~~~~gl~--~~--~gi~Vd~-------~~~ts~~~IyA~GD~~~~ 288 (431)
T 1q1r_A 253 -ELASAAGLQ--VD--NGIVINE-------HMQTSDPLIMAVGDCARF 288 (431)
T ss_dssp -HHHHHTTCC--BS--SSEECCT-------TSBCSSTTEEECGGGEEE
T ss_pred -chhhccCCC--CC--CCEEECC-------CcccCCCCEEEEEeEEEE
Confidence 223333331 11 2233332 123457899999998754
No 167
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.76 E-value=2.6e-08 Score=96.72 Aligned_cols=57 Identities=21% Similarity=0.253 Sum_probs=43.3
Q ss_pred HHHHHHcCCCcEEEcCceEEEEEEEC-CEEEEEEEeecceecccCCCCCCCceEEEcC-eEEEcCCCC
Q 020815 176 IMSKLLARPNVKLFNAVAAEDLIVKG-GRVGGVVTNWALVSMNHDTQSCMDPNVMEAK-VVVSSCGHD 241 (321)
Q Consensus 176 l~~~~~~~~gv~i~~~~~v~~l~~~~-~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~-~VI~AtG~~ 241 (321)
++..+.+..|++|+.++.|++|+.++ +++.||.+.. . .+++..+++|+ .||+|+|++
T Consensus 214 ~l~~a~~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~------~---~~g~~~~i~A~k~VIlaaG~~ 272 (546)
T 2jbv_A 214 YIHPIVEQENFTLLTGLRARQLVFDADRRCTGVDIVD------S---AFGHTHRLTARNEVVLSTGAI 272 (546)
T ss_dssp HTGGGTTCTTEEEECSCEEEEEEECTTSBEEEEEEES------S---TTSCEEEEEEEEEEEECSHHH
T ss_pred HHHHHhcCCCcEEEeCCEEEEEEECCCCeEEEEEEEE------C---CCCcEEEEEeCccEEEecCcc
Confidence 34444446799999999999999987 8899998742 1 01244689998 999999964
No 168
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.75 E-value=4.6e-09 Score=98.96 Aligned_cols=34 Identities=24% Similarity=0.484 Sum_probs=31.8
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.+||+|||||++|+++|+.|++. |++|+|||+..
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~-G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQH-DVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHT-TCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHC-CCeEEEEcCCC
Confidence 57999999999999999999999 99999999975
No 169
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.74 E-value=5.4e-09 Score=104.35 Aligned_cols=41 Identities=34% Similarity=0.518 Sum_probs=37.8
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAW 131 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~ 131 (321)
.+||+|||||++|+++|+.|++. |++|+|||+....||.++
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~-G~~V~liE~~~~~GG~~~ 431 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVR-GYDVVLAEAGRDLGGRVT 431 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSSSCTHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCCCCCEee
Confidence 58999999999999999999999 999999999988887654
No 170
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.74 E-value=2.3e-08 Score=95.22 Aligned_cols=120 Identities=13% Similarity=0.128 Sum_probs=61.1
Q ss_pred ccEEEECCChHHHHHHHHhhcC-CCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~-~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 169 (321)
.||+|||||++|+++|+.|++. +|.+|+|||+.+..+- ....+.. ++ +-.+.....+.. ..
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~---~~~gl~~----------~~---~g~~~~~~~~~~--~~ 65 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISY---GGCGIPY----------YV---SGEVSNIESLQA--TP 65 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC----------------------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccc---cccccch----------hh---cCCCCchHHhcc--cc
Confidence 5999999999999999999983 4799999999876431 1100000 00 000000000000 00
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
..+. ...+.+.+..+++++.+++|+++..+++.+. +... .+++..++.+|.+|+|||..
T Consensus 66 ~~~~-~~~~~~~~~~gi~~~~~~~V~~id~~~~~v~-~~~~-----------~~g~~~~~~~d~lviAtG~~ 124 (472)
T 3iwa_A 66 YNVV-RDPEFFRINKDVEALVETRAHAIDRAAHTVE-IENL-----------RTGERRTLKYDKLVLALGSK 124 (472)
T ss_dssp ----------------CEEECSEEEEEEETTTTEEE-EEET-----------TTCCEEEEECSEEEECCCEE
T ss_pred chhc-cCHHHHhhhcCcEEEECCEEEEEECCCCEEE-Eeec-----------CCCCEEEEECCEEEEeCCCC
Confidence 0011 1123333357899999999999876666432 1110 01233589999999999963
No 171
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.73 E-value=1.1e-07 Score=90.06 Aligned_cols=99 Identities=13% Similarity=0.159 Sum_probs=73.7
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.++|||+|..|+.+|..|++. |.+|+|+|+.+.+-... + ..
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~~~--------------------------~-----------~~ 191 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQ-NYNVNLIDGHERVLYKY--------------------------F-----------DK 191 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSSTTTTT--------------------------S-----------CH
T ss_pred CeEEEECcCHHHHHHHHHHHhc-CCEEEEEEcCCchhhhh--------------------------h-----------hh
Confidence 4799999999999999999999 99999999975321100 0 02
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~ 243 (321)
.+.+.+.+.+. +.|++++.+++|+++..+++++..+.. ++.++.+|.||+|+|....
T Consensus 192 ~~~~~l~~~l~-~~Gv~i~~~~~v~~i~~~~~~v~~v~~---------------~g~~i~~D~vv~a~G~~p~ 248 (452)
T 2cdu_A 192 EFTDILAKDYE-AHGVNLVLGSKVAAFEEVDDEIITKTL---------------DGKEIKSDIAILCIGFRPN 248 (452)
T ss_dssp HHHHHHHHHHH-HTTCEEEESSCEEEEEEETTEEEEEET---------------TSCEEEESEEEECCCEEEC
T ss_pred hHHHHHHHHHH-HCCCEEEcCCeeEEEEcCCCeEEEEEe---------------CCCEEECCEEEECcCCCCC
Confidence 34445555554 679999999999999876776655543 1267999999999995443
No 172
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.73 E-value=1.8e-08 Score=95.29 Aligned_cols=110 Identities=15% Similarity=0.161 Sum_probs=63.9
Q ss_pred cccEEEECCChHHHHHHHHhhcC-CCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEec
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKH 168 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~-~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~ 168 (321)
.+||+|||||++|+++|+.|++. ++.+|+|||+.+..+.... .++. ++... ..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~---~~p~----------~~~~~-------------~~ 56 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPC---GIPY----------VVEGL-------------ST 56 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC-----------------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCc---CCcc----------ccCCC-------------CC
Confidence 37999999999999999999984 3789999999875432110 0000 00000 00
Q ss_pred HHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 169 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 169 ~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
...+.....+.+.++.+++++.+++|+.+..++. .+.+.. ...++.+|.||+|||..
T Consensus 57 ~~~~~~~~~~~~~~~~gi~v~~~~~v~~i~~~~~---~v~~~~-------------g~~~~~~d~lviAtG~~ 113 (449)
T 3kd9_A 57 PDKLMYYPPEVFIKKRGIDLHLNAEVIEVDTGYV---RVRENG-------------GEKSYEWDYLVFANGAS 113 (449)
T ss_dssp ---------CTHHHHTTCEEETTCEEEEECSSEE---EEECSS-------------SEEEEECSEEEECCCEE
T ss_pred HHHhhhcCHHHHHHhcCcEEEecCEEEEEecCCC---EEEECC-------------ceEEEEcCEEEECCCCC
Confidence 1111222223332357999999999988743221 122210 12579999999999954
No 173
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.72 E-value=4e-08 Score=91.85 Aligned_cols=133 Identities=17% Similarity=0.215 Sum_probs=88.2
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.|+|||+|..|+.+|..|++. |.+|+|+|+.+.+.... ...
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~~~-------------------------------------~~~ 187 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTA-GVHVSLVETQPRLMSRA-------------------------------------APA 187 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSSSTTT-------------------------------------SCH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEEEEEeCCcccccc-------------------------------------cCH
Confidence 5899999999999999999999 99999999986431100 002
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCCCcchhhh
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK 250 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~~~~~~~~ 250 (321)
.+...+.+.+. +.|++++.+++++++. ++ .|.+. ++.++.+|.||+|+|..... .
T Consensus 188 ~~~~~l~~~l~-~~GV~i~~~~~v~~i~--~~---~v~~~--------------~g~~i~~D~vi~a~G~~p~~-----~ 242 (408)
T 2gqw_A 188 TLADFVARYHA-AQGVDLRFERSVTGSV--DG---VVLLD--------------DGTRIAADMVVVGIGVLAND-----A 242 (408)
T ss_dssp HHHHHHHHHHH-HTTCEEEESCCEEEEE--TT---EEEET--------------TSCEEECSEEEECSCEEECC-----H
T ss_pred HHHHHHHHHHH-HcCcEEEeCCEEEEEE--CC---EEEEC--------------CCCEEEcCEEEECcCCCccH-----H
Confidence 23344455554 6799999999999987 44 34442 22679999999999954332 2
Q ss_pred hhhhcCCcccccCCceeecccccchhhcccccccccccccccchhhc
Q 020815 251 RLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEI 297 (321)
Q Consensus 251 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~g~~~~~~ 297 (321)
.+.+.++. .. .++.++. +.+...|++|+.|+++...
T Consensus 243 l~~~~gl~--~~--~gi~Vd~-------~~~t~~~~IyA~GD~~~~~ 278 (408)
T 2gqw_A 243 LARAAGLA--CD--DGIFVDA-------YGRTTCPDVYALGDVTRQR 278 (408)
T ss_dssp HHHHHTCC--BS--SSEECCT-------TCBCSSTTEEECGGGEEEE
T ss_pred HHHhCCCC--CC--CCEEECC-------CCccCCCCEEEEEEEEEec
Confidence 23333331 11 2233332 1234579999999987543
No 174
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.71 E-value=1.4e-07 Score=86.17 Aligned_cols=138 Identities=17% Similarity=0.196 Sum_probs=91.0
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.|+|||+|..|+.+|..|++. +.+|+++++.+.+... .
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~-g~~V~lv~~~~~~~~~----------------------------------------~ 202 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKN-AASVTLVHRGHEFQGH----------------------------------------G 202 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTT-SSEEEEECSSSSCSSC----------------------------------------S
T ss_pred CcEEEECCCHHHHHHHHHHHhc-CCEEEEEEcCCCCCCC----------------------------------------H
Confidence 4799999999999999999999 9999999987532110 0
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCCCcchhhh
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK 250 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~~~~~~~~ 250 (321)
.+...+.+... +.|++++.+++++++..+++++.+|.+.. .+|+..++.+|.||+|+|......
T Consensus 203 ~~~~~l~~~~~-~~gv~i~~~~~v~~i~~~~~~v~~v~~~~----------~~g~~~~i~~D~vi~a~G~~p~~~----- 266 (360)
T 3ab1_A 203 KTAHEVERARA-NGTIDVYLETEVASIEESNGVLTRVHLRS----------SDGSKWTVEADRLLILIGFKSNLG----- 266 (360)
T ss_dssp HHHHSSHHHHH-HTSEEEESSEEEEEEEEETTEEEEEEEEE----------TTCCEEEEECSEEEECCCBCCSCG-----
T ss_pred HHHHHHHHHhh-cCceEEEcCcCHHHhccCCCceEEEEEEe----------cCCCeEEEeCCEEEECCCCCCCHH-----
Confidence 11222333333 56999999999999998888877777631 122346899999999999544321
Q ss_pred hhhhcCCcccccCCceeecccccchhhcccccccccccccccchh
Q 020815 251 RLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVA 295 (321)
Q Consensus 251 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~g~~~~ 295 (321)
.+...+.. +. ...+.++. ..+...|++|++|+++.
T Consensus 267 ~l~~~~~~--~~-~g~i~vd~-------~~~t~~~~vya~GD~~~ 301 (360)
T 3ab1_A 267 PLARWDLE--LY-ENALVVDS-------HMKTSVDGLYAAGDIAY 301 (360)
T ss_dssp GGGGSSCC--EE-TTEEECCT-------TSBCSSTTEEECSTTEE
T ss_pred HHHhhccc--cc-cCeeeecC-------CCcCCCCCEEEecCccC
Confidence 12222221 11 12222222 12345799999999874
No 175
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.71 E-value=1.7e-07 Score=88.84 Aligned_cols=100 Identities=17% Similarity=0.264 Sum_probs=72.4
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-+|+|||+|..|+.+|..|++. |.+|+|+|+.+.+... + ..
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~---------------------------~-----------~~ 211 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANF-GTKVTILEGAGEILSG---------------------------F-----------EK 211 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSSSTT---------------------------S-----------CH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCCccccc---------------------------c-----------CH
Confidence 5899999999999999999999 9999999997543110 0 02
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
.+...+.+.+. +.|++++.+++++++..+++.+. +.+.. +++..++.+|.||+|+|...
T Consensus 212 ~~~~~l~~~l~-~~gv~i~~~~~v~~i~~~~~~~~-v~~~~-----------~g~~~~~~~D~vv~a~G~~p 270 (455)
T 1ebd_A 212 QMAAIIKKRLK-KKGVEVVTNALAKGAEEREDGVT-VTYEA-----------NGETKTIDADYVLVTVGRRP 270 (455)
T ss_dssp HHHHHHHHHHH-HTTCEEEESEEEEEEEEETTEEE-EEEEE-----------TTEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHH-HCCCEEEeCCEEEEEEEeCCeEE-EEEEe-----------CCceeEEEcCEEEECcCCCc
Confidence 33444555554 57999999999999987766432 33210 01236799999999999543
No 176
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=98.71 E-value=6e-08 Score=94.94 Aligned_cols=54 Identities=15% Similarity=0.072 Sum_probs=42.0
Q ss_pred HHcCCCcEEEcCceEEEEEEEC----CEEEEEEEeecceecccCCCCCCCceEEEc-CeEEEcCCCCCC
Q 020815 180 LLARPNVKLFNAVAAEDLIVKG----GRVGGVVTNWALVSMNHDTQSCMDPNVMEA-KVVVSSCGHDGP 243 (321)
Q Consensus 180 ~~~~~gv~i~~~~~v~~l~~~~----~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a-~~VI~AtG~~~~ 243 (321)
+.++.|++|+.++.|++|+.++ ++++||...+ .++...+++| |.||+|+|+++.
T Consensus 240 ~~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~----------~~g~~~~v~A~k~VILaaG~~~s 298 (587)
T 1gpe_A 240 NYQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGT----------NKAVNFDVFAKHEVLLAAGSAIS 298 (587)
T ss_dssp TTTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEE----------ETTEEEEEEEEEEEEECSCTTTH
T ss_pred hhcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEe----------CCCcEEEEEecccEEEccCCCCC
Confidence 3346899999999999999874 4899998752 1123467899 899999998763
No 177
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.70 E-value=2.8e-07 Score=87.60 Aligned_cols=103 Identities=13% Similarity=0.102 Sum_probs=73.3
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-+|+|||||..|+.+|..|++. |.+|+|+|+.+.+... ...
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~--------------------------------------~~~ 210 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRL-GAEVTLIEYMPEILPQ--------------------------------------GDP 210 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSSTT--------------------------------------SCH
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCeEEEEEcCCccccc--------------------------------------cCH
Confidence 4899999999999999999999 9999999997543110 012
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~ 243 (321)
++.+.+.+.+. +.|++++.+++++++..+++.+. +.... . ..|+..++.+|.||+|+|..+.
T Consensus 211 ~~~~~l~~~l~-~~gV~i~~~~~v~~i~~~~~~~~-v~~~~------~---~~g~~~~i~~D~vv~a~G~~p~ 272 (464)
T 2eq6_A 211 ETAALLRRALE-KEGIRVRTKTKAVGYEKKKDGLH-VRLEP------A---EGGEGEEVVVDKVLVAVGRKPR 272 (464)
T ss_dssp HHHHHHHHHHH-HTTCEEECSEEEEEEEEETTEEE-EEEEE------T---TCCSCEEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHH-hcCCEEEcCCEEEEEEEeCCEEE-EEEee------c---CCCceeEEEcCEEEECCCcccC
Confidence 33444555554 57999999999999987776532 33320 0 0023348999999999995543
No 178
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.70 E-value=1.4e-08 Score=98.40 Aligned_cols=34 Identities=29% Similarity=0.508 Sum_probs=31.8
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVS 125 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~ 125 (321)
+||+||||+|.+|+.+|.+|++ |.+|+|||++..
T Consensus 26 ~yD~IIVGsG~AG~v~A~rLse--g~~VlvLEaG~~ 59 (536)
T 1ju2_A 26 SYDYVIVGGGTSGCPLAATLSE--KYKVLVLERGSL 59 (536)
T ss_dssp EEEEEEECCSTTHHHHHHHHTT--TSCEEEECSSBC
T ss_pred cccEEEECccHHHHHHHHHHhc--CCcEEEEecCCC
Confidence 6999999999999999999998 799999999854
No 179
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.70 E-value=2.7e-08 Score=94.29 Aligned_cols=112 Identities=19% Similarity=0.279 Sum_probs=68.4
Q ss_pred ccEEEECCChHHHHHHHHhhcC-CCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~-~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 169 (321)
.||+|||||++|+++|+.|++. +|.+|+|||+.+..|- ....... ++.. .+.. .
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~---~~~~~~~----------~~~~---~~~~---------~ 57 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGY---LSGGLSA----------YFNH---TINE---------L 57 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSS---CCC-----------------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcc---cCccchh----------hhcC---CCCC---------H
Confidence 5999999999999999999983 4799999999876541 1110000 0000 0000 0
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
..+...+.+.+. +.+++++.+++|+.+..+++.+.- .... +..++.+|.+|+|||...
T Consensus 58 ~~~~~~~~~~~~-~~gi~~~~~~~V~~id~~~~~v~v-~~~~-------------~~~~~~~d~lviAtG~~p 115 (452)
T 3oc4_A 58 HEARYITEEELR-RQKIQLLLNREVVAMDVENQLIAW-TRKE-------------EQQWYSYDKLILATGASQ 115 (452)
T ss_dssp ---CCCCHHHHH-HTTEEEECSCEEEEEETTTTEEEE-EETT-------------EEEEEECSEEEECCCCCB
T ss_pred HHhhcCCHHHHH-HCCCEEEECCEEEEEECCCCEEEE-EecC-------------ceEEEEcCEEEECCCccc
Confidence 000000112222 468999999999998776664432 1110 236899999999999754
No 180
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.69 E-value=4.5e-07 Score=80.90 Aligned_cols=99 Identities=11% Similarity=0.132 Sum_probs=73.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecH
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 169 (321)
.-.|+|||+|..|+.+|..|++. |.+|+++++.+.+.. .
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~~~---------------------------------------~- 181 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANI-CKKVYLIHRRDGFRC---------------------------------------A- 181 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTT-SSEEEEECSSSSCCS---------------------------------------C-
T ss_pred CCEEEEECCCHHHHHHHHHHHhc-CCEEEEEeeCCccCC---------------------------------------C-
Confidence 35899999999999999999999 999999998753210 0
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
..+.+++.++.|++++.++.++++..+++++.++..... .+|+..++.+|.||+|+|...
T Consensus 182 ----~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~---------~~g~~~~i~~D~vi~a~G~~p 241 (311)
T 2q0l_A 182 ----PITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNT---------ATNEKRELVVPGFFIFVGYDV 241 (311)
T ss_dssp ----HHHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEET---------TTCCEEEEECSEEEECSCEEE
T ss_pred ----HHHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEec---------CCCceEEEecCEEEEEecCcc
Confidence 113344444579999999999999877677766666420 112335899999999999443
No 181
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.69 E-value=6.6e-08 Score=94.07 Aligned_cols=137 Identities=15% Similarity=0.233 Sum_probs=87.7
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.|+|||+|..|+.+|..|++. |.+|+++++.+.+... ...
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~--------------------------------------~~~ 192 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHL-GIKTTLLELADQVMTP--------------------------------------VDR 192 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSSCTT--------------------------------------SCH
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCcEEEEEcCCccchh--------------------------------------cCH
Confidence 4899999999999999999999 9999999997532110 012
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEE-------------------CCEEEEEEEeecceecccCCCCCCCceEEEc
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVK-------------------GGRVGGVVTNWALVSMNHDTQSCMDPNVMEA 231 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~-------------------~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a 231 (321)
.+...+.+.+. +.|++++.++.++++..+ ++++. +... ++.++.+
T Consensus 193 ~~~~~l~~~l~-~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~--------------~g~~i~~ 256 (565)
T 3ntd_A 193 EMAGFAHQAIR-DQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLS-LTLS--------------NGELLET 256 (565)
T ss_dssp HHHHHHHHHHH-HTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEE-EEET--------------TSCEEEE
T ss_pred HHHHHHHHHHH-HCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEE-EEEc--------------CCCEEEc
Confidence 23344445554 679999999999999873 44433 2221 2358999
Q ss_pred CeEEEcCCCCCCCcchhhhhhhhcCCcccccCCceeecccccchhhcccccccccccccccchhh
Q 020815 232 KVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAE 296 (321)
Q Consensus 232 ~~VI~AtG~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~g~~~~~ 296 (321)
|.||+|+|...... .+...|+ .+.....+.++. +.+...|++|++|+++..
T Consensus 257 D~vi~a~G~~p~~~-----l~~~~g~--~~~~~g~i~vd~-------~~~t~~~~IyA~GD~~~~ 307 (565)
T 3ntd_A 257 DLLIMAIGVRPETQ-----LARDAGL--AIGELGGIKVNA-------MMQTSDPAIYAVGDAVEE 307 (565)
T ss_dssp SEEEECSCEEECCH-----HHHHHTC--CBCTTSSBCCCT-------TCBCSSTTEEECGGGBCE
T ss_pred CEEEECcCCccchH-----HHHhCCc--ccCCCCCEEECC-------CcccCCCCEEEeeeeEee
Confidence 99999999544321 2222332 111111222221 223457999999998743
No 182
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.69 E-value=2.6e-08 Score=95.10 Aligned_cols=115 Identities=11% Similarity=0.096 Sum_probs=69.5
Q ss_pred ccEEEECCChHHHHHHHHhhcC-CCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~-~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 169 (321)
+||+|||||++|+++|+.|++. +|.+|+|||+....+.... .+. .++......+..
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~---~~~----------~~~~~~~~~~~~---------- 93 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQC---GLP----------YVISGAIASTEK---------- 93 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGG---GHH----------HHHTTSSSCGGG----------
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCC---Ccc----------hhhcCCcCCHHH----------
Confidence 5999999999999999999983 3899999999865532110 000 011100000110
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
+.....+.+.++.|++++.+++|+.+..+++.+. +... .+++..++.+|+||+|||...
T Consensus 94 --l~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~-v~~~-----------~~g~~~~~~~d~lviAtG~~p 152 (480)
T 3cgb_A 94 --LIARNVKTFRDKYGIDAKVRHEVTKVDTEKKIVY-AEHT-----------KTKDVFEFSYDRLLIATGVRP 152 (480)
T ss_dssp --GBSSCHHHHHHTTCCEEESSEEEEEEETTTTEEE-EEET-----------TTCCEEEEECSEEEECCCEEE
T ss_pred --hhhcCHHHHHhhcCCEEEeCCEEEEEECCCCEEE-EEEc-----------CCCceEEEEcCEEEECCCCcc
Confidence 0011123333356999999999988876565432 1110 011224799999999999543
No 183
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.68 E-value=2.5e-07 Score=88.14 Aligned_cols=103 Identities=14% Similarity=0.167 Sum_probs=73.0
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.++|||||..|+.+|..|++. |.+|+|+|+.+.+... + ..
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~-~-------------------------------------~~ 224 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRL-GSKVTVVEFQPQIGAS-M-------------------------------------DG 224 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSSSS-S-------------------------------------CH
T ss_pred ceEEEECCCHHHHHHHHHHHHc-CCEEEEEEeCCccccc-c-------------------------------------CH
Confidence 5899999999999999999999 9999999998643210 0 02
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEE-CCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~-~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
.+...+.+.+. +.|++++.+++++++..+ ++....+.+.. . .+++..++.+|.||+|+|...
T Consensus 225 ~~~~~l~~~l~-~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~------~---~~g~~~~~~~D~vv~a~G~~p 287 (478)
T 1v59_A 225 EVAKATQKFLK-KQGLDFKLSTKVISAKRNDDKNVVEIVVED------T---KTNKQENLEAEVLLVAVGRRP 287 (478)
T ss_dssp HHHHHHHHHHH-HTTCEEECSEEEEEEEEETTTTEEEEEEEE------T---TTTEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHH-HCCCEEEeCCEEEEEEEecCCCeEEEEEEE------c---CCCCceEEECCEEEECCCCCc
Confidence 34445555554 579999999999999862 33333444421 0 011346799999999999543
No 184
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.68 E-value=6.2e-08 Score=92.25 Aligned_cols=139 Identities=19% Similarity=0.243 Sum_probs=89.7
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-+++|||+|..|+.+|..|++..|.+|+++|+.+.+.... ...
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~-------------------------------------~~~ 202 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGF-------------------------------------TSK 202 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTT-------------------------------------SCH
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccc-------------------------------------cCH
Confidence 5899999999999999999884268999999875321100 012
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCCCcchhhh
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK 250 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~~~~~~~~ 250 (321)
.+.+.+.+.+. +.|++++.+++++++..+++++. +...+ +.++.+|.||+|+|..... .
T Consensus 203 ~~~~~l~~~l~-~~GV~i~~~~~v~~i~~~~~~v~-v~~~~--------------g~~i~aD~Vv~a~G~~p~~-----~ 261 (472)
T 3iwa_A 203 SLSQMLRHDLE-KNDVVVHTGEKVVRLEGENGKVA-RVITD--------------KRTLDADLVILAAGVSPNT-----Q 261 (472)
T ss_dssp HHHHHHHHHHH-HTTCEEECSCCEEEEEESSSBEE-EEEES--------------SCEEECSEEEECSCEEECC-----H
T ss_pred HHHHHHHHHHH-hcCCEEEeCCEEEEEEccCCeEE-EEEeC--------------CCEEEcCEEEECCCCCcCH-----H
Confidence 34455555554 67999999999999987677655 44322 2589999999999954332 1
Q ss_pred hhhhcCCcccccCCceeecccccchhhcccccccccccccccchhh
Q 020815 251 RLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAE 296 (321)
Q Consensus 251 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~g~~~~~ 296 (321)
.+.+.|+ .+.....+.++. ..+...|++|++|+++..
T Consensus 262 l~~~~gl--~~~~~g~i~vd~-------~~~t~~~~Iya~GD~~~~ 298 (472)
T 3iwa_A 262 LARDAGL--ELDPRGAIIVDT-------RMRTSDPDIFAGGDCVTI 298 (472)
T ss_dssp HHHHHTC--CBCTTCCEECCT-------TCBCSSTTEEECGGGEEE
T ss_pred HHHhCCc--cCCCCCCEEECC-------CcccCCCCEEEeccceec
Confidence 2222332 111112222222 223457999999998743
No 185
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.68 E-value=3.4e-07 Score=86.67 Aligned_cols=98 Identities=12% Similarity=0.109 Sum_probs=74.0
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.++|||+|..|+.+|..|++. |.+|+++|+.+.+.... + ..
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~~~--------------------------~-----------d~ 189 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKM-KKTVHVFESLENLLPKY--------------------------F-----------DK 189 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSSSTTT--------------------------C-----------CH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCeEEEEEccCcccccc--------------------------C-----------CH
Confidence 4799999999999999999999 99999999975421100 0 12
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~ 243 (321)
.+.+.+.+.+. +.|++++.++.|+++..+++++ .+.+. + .++.+|.||+|+|....
T Consensus 190 ~~~~~l~~~l~-~~GV~i~~~~~v~~i~~~~~~v-~v~~~--------------~-g~i~aD~Vv~A~G~~p~ 245 (452)
T 3oc4_A 190 EMVAEVQKSLE-KQAVIFHFEETVLGIEETANGI-VLETS--------------E-QEISCDSGIFALNLHPQ 245 (452)
T ss_dssp HHHHHHHHHHH-TTTEEEEETCCEEEEEECSSCE-EEEES--------------S-CEEEESEEEECSCCBCC
T ss_pred HHHHHHHHHHH-HcCCEEEeCCEEEEEEccCCeE-EEEEC--------------C-CEEEeCEEEECcCCCCC
Confidence 34455555554 7899999999999998777766 55542 1 37999999999996543
No 186
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.67 E-value=1.4e-07 Score=89.34 Aligned_cols=98 Identities=14% Similarity=0.159 Sum_probs=72.0
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.|+|||||.+|+.+|..|++. |.+|+|+|+.+.+... ...
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~-g~~V~lv~~~~~~l~~--------------------------------------~~~ 208 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRL-GAEVIVLEYMDRILPT--------------------------------------MDL 208 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSCTT--------------------------------------SCH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCEEEEEecCCccccc--------------------------------------cCH
Confidence 4799999999999999999999 9999999997542110 002
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~ 243 (321)
.+.+.+.+.+. +.|++++.+++|+++..+++.+ .+.+. ++.++.+|.||+|+|..+.
T Consensus 209 ~~~~~l~~~l~-~~Gv~i~~~~~V~~i~~~~~~v-~v~~~--------------~g~~i~~D~vv~A~G~~p~ 265 (455)
T 2yqu_A 209 EVSRAAERVFK-KQGLTIRTGVRVTAVVPEAKGA-RVELE--------------GGEVLEADRVLVAVGRRPY 265 (455)
T ss_dssp HHHHHHHHHHH-HHTCEEECSCCEEEEEEETTEE-EEEET--------------TSCEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHH-HCCCEEEECCEEEEEEEeCCEE-EEEEC--------------CCeEEEcCEEEECcCCCcC
Confidence 33444455554 5699999999999998777643 23321 1267999999999995543
No 187
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.66 E-value=4.3e-08 Score=90.98 Aligned_cols=107 Identities=16% Similarity=0.156 Sum_probs=69.0
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecH
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 169 (321)
...|+|||||+||+++|..|.+. +.+|+|||+.+..+.. ......++.. ..+.+.
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~-~~~itlie~~~~~~y~-------------~~~l~~~l~g-~~~~~~---------- 63 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGK-CDDITMINSEKYLPYY-------------RPRLNEIIAK-NKSIDD---------- 63 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTT-CSCEEEECSSSSCCBC-------------GGGHHHHHHS-CCCGGG----------
T ss_pred CCCEEEEcCcHHHHHHHHHHhCC-CCEEEEEECCCCCCcc-------------cChhhHHHcC-CCCHHH----------
Confidence 57899999999999999999766 8999999998754311 0011111211 011110
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
+.....+.+. +.+++++.+++|+.+..++.. |.+. ++.++.+|++|+|||..
T Consensus 64 --l~~~~~~~~~-~~~i~~~~~~~V~~id~~~~~---v~~~--------------~g~~~~yd~lvlAtG~~ 115 (385)
T 3klj_A 64 --ILIKKNDWYE-KNNIKVITSEFATSIDPNNKL---VTLK--------------SGEKIKYEKLIIASGSI 115 (385)
T ss_dssp --TBSSCHHHHH-HTTCEEECSCCEEEEETTTTE---EEET--------------TSCEEECSEEEECCCEE
T ss_pred --ccCCCHHHHH-HCCCEEEeCCEEEEEECCCCE---EEEC--------------CCCEEECCEEEEecCCC
Confidence 0001111122 469999999999999766653 3332 23689999999999964
No 188
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.65 E-value=4e-07 Score=81.20 Aligned_cols=97 Identities=20% Similarity=0.236 Sum_probs=72.8
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.|+|||+|..|+.+|..|++. +.+|+++++.+.+. ++
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~~-----------------------------~~------------ 182 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGI-VEHVTLLEFAPEMK-----------------------------AD------------ 182 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-BSEEEEECSSSSCC-----------------------------SC------------
T ss_pred CEEEEECCCHHHHHHHHHHHHh-CCEEEEEEeCcccC-----------------------------cc------------
Confidence 4899999999999999999999 99999999875320 00
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
..+.+++.+..|++++.+++++++..+++++.++.+.+. .+++..++.+|.||+|+|..
T Consensus 183 ---~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~---------~~g~~~~i~~D~vi~a~G~~ 241 (310)
T 1fl2_A 183 ---QVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDR---------VSGDIHNIELAGIFVQIGLL 241 (310)
T ss_dssp ---HHHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEET---------TTCCEEEEECSEEEECSCEE
T ss_pred ---HHHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEEC---------CCCcEEEEEcCEEEEeeCCc
Confidence 123344443479999999999999876677777776431 11234689999999999944
No 189
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.65 E-value=3.5e-07 Score=82.10 Aligned_cols=136 Identities=20% Similarity=0.255 Sum_probs=88.0
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.|+|||+|..|+..|..|++. +.+|.++++.+.... .
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~-g~~V~~i~~~~~~~~---------------------------------------~-- 193 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEY-VKNVTIIEYMPKYMC---------------------------------------E-- 193 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT-BSEEEEECSSSSCCS---------------------------------------C--
T ss_pred CeEEEECCCHHHHHHHHHHHhh-CCcEEEEEcCCccCC---------------------------------------C--
Confidence 5799999999999999999999 999999998753210 0
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCCCcchhhh
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK 250 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~~~~~~~~ 250 (321)
..+.+++. +.|++++.+++++++..+++++.++.+... .+|+..++.+|.||+|+|..... .
T Consensus 194 ---~~l~~~l~-~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~---------~~g~~~~i~~D~vi~a~G~~p~~-----~ 255 (319)
T 3cty_A 194 ---NAYVQEIK-KRNIPYIMNAQVTEIVGDGKKVTGVKYKDR---------TTGEEKLIETDGVFIYVGLIPQT-----S 255 (319)
T ss_dssp ---HHHHHHHH-HTTCCEECSEEEEEEEESSSSEEEEEEEET---------TTCCEEEECCSEEEECCCEEECC-----G
T ss_pred ---HHHHHHHh-cCCcEEEcCCeEEEEecCCceEEEEEEEEc---------CCCceEEEecCEEEEeeCCccCh-----H
Confidence 11233333 479999999999999876666777766420 11233579999999999944332 1
Q ss_pred hhhhcCCcccccCCceeecccccchhhcccccccccccccccchh
Q 020815 251 RLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVA 295 (321)
Q Consensus 251 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~g~~~~ 295 (321)
.+.+.++ .+.....+.++. +.+...|++|++|+++.
T Consensus 256 ~l~~~gl--~~~~~g~i~vd~-------~~~t~~~~vya~GD~~~ 291 (319)
T 3cty_A 256 FLKDSGV--KLDERGYIVVDS-------RQRTSVPGVYAAGDVTS 291 (319)
T ss_dssp GGTTSCC--CBCTTSCBCCCT-------TCBCSSTTEEECSTTBT
T ss_pred HHhhccc--cccCCccEeCCC-------CCccCCCCEEEeecccC
Confidence 1222222 011011111211 22345799999999874
No 190
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.65 E-value=2e-07 Score=89.23 Aligned_cols=97 Identities=20% Similarity=0.296 Sum_probs=71.3
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.|+|||+|..|+.+|..|++. |.+|+|+|+.+.+.... + ..
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~~l~~~--------------------------~-----------~~ 236 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRK-GKEVVLIDVVDTCLAGY--------------------------Y-----------DR 236 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSTTTTT--------------------------S-----------CH
T ss_pred ceEEEECCCHHHHHHHHHHHHC-CCeEEEEEcccchhhhH--------------------------H-----------HH
Confidence 5799999999999999999999 99999999975421100 0 02
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
.+.+.+.+.+. +.|++++.+++++++.. ++++..+.+ + +.++.+|.||+|+|...
T Consensus 237 ~~~~~l~~~l~-~~GV~i~~~~~v~~i~~-~~~v~~v~~-~--------------g~~i~~D~Vi~a~G~~p 291 (490)
T 2bc0_A 237 DLTDLMAKNME-EHGIQLAFGETVKEVAG-NGKVEKIIT-D--------------KNEYDVDMVILAVGFRP 291 (490)
T ss_dssp HHHHHHHHHHH-TTTCEEEETCCEEEEEC-SSSCCEEEE-S--------------SCEEECSEEEECCCEEE
T ss_pred HHHHHHHHHHH-hCCeEEEeCCEEEEEEc-CCcEEEEEE-C--------------CcEEECCEEEECCCCCc
Confidence 34445555554 68999999999999875 444444443 1 25799999999999543
No 191
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.65 E-value=4.3e-07 Score=81.90 Aligned_cols=98 Identities=16% Similarity=0.256 Sum_probs=72.7
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.|+|||+|..|+.+|..|++. |.+|.++++.+.+.. .
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~-g~~V~lv~~~~~~~~----------------------------------------~- 197 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKY-GSKVYIIHRRDAFRA----------------------------------------S- 197 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT-SSEEEEECSSSSCCS----------------------------------------C-
T ss_pred CeEEEECCChHHHHHHHHHHhc-CCeEEEEecCCcCCc----------------------------------------c-
Confidence 5799999999999999999999 999999999753210 0
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECC--EEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~--~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
..+.+++.++.|++++.+++++++..+++ ++.++.+... .+++..++.+|.||+|+|...
T Consensus 198 ---~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~---------~~g~~~~i~~D~vi~a~G~~p 259 (333)
T 1vdc_A 198 ---KIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNV---------VTGDVSDLKVSGLFFAIGHEP 259 (333)
T ss_dssp ---HHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEET---------TTCCEEEEECSEEEECSCEEE
T ss_pred ---HHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEec---------CCCceEEEecCEEEEEeCCcc
Confidence 12233444478999999999999986654 6666666421 122446899999999999543
No 192
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.64 E-value=4.3e-08 Score=90.77 Aligned_cols=108 Identities=17% Similarity=0.248 Sum_probs=65.9
Q ss_pred cccEEEECCChHHHHHHHHhhcCCC--CeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEe
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPN--IQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIK 167 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G--~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~ 167 (321)
++||+|||||++|+++|+.|++. | .+|+|+|++. | +.+....... .+... .
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~-g~~~~V~lie~~~--g-------~~~~~~~l~~---------~~~~~--------~ 56 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKL-DGETPLLMITADD--G-------RSYSKPMLST---------GFSKN--------K 56 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTT-CSSSCEEEECSSC--C-------CEECGGGGGG---------TTTTT--------C
T ss_pred CCcEEEECChHHHHHHHHHHHhh-CCCCCEEEEECCC--C-------CccCcccccH---------HHhCC--------C
Confidence 48999999999999999999998 7 5689999874 1 1111111100 00000 0
Q ss_pred cHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 168 HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 168 ~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
....+.....+.+.++.+++++.+++++.+..++..+ .+. ..++.+|.+|+|||...
T Consensus 57 ~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v---~~~---------------~~~~~~d~lviAtG~~p 113 (384)
T 2v3a_A 57 DADGLAMAEPGAMAEQLNARILTHTRVTGIDPGHQRI---WIG---------------EEEVRYRDLVLAWGAEP 113 (384)
T ss_dssp CHHHHEEECHHHHHHHTTCEEECSCCCCEEEGGGTEE---EET---------------TEEEECSEEEECCCEEE
T ss_pred CHHHhhccCHHHHHHhCCcEEEeCCEEEEEECCCCEE---EEC---------------CcEEECCEEEEeCCCCc
Confidence 1111111112222235689999998888876544432 221 15799999999999643
No 193
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.63 E-value=6e-08 Score=92.83 Aligned_cols=111 Identities=16% Similarity=0.195 Sum_probs=68.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCC---CeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEE
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPN---IQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVI 166 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G---~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 166 (321)
++||+|||||++|+++|..|++. | .+|+|||+....+.. ...+. .++...-..+.. ..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~-g~~~~~V~lie~~~~~~~~---~~~~~----------~~~~~~~~~~~~---~~-- 95 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTN-YGDANEIVVFDQNSNISFL---GAGMA----------LWIGEQIAGPEG---LF-- 95 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-HGGGSEEEEECSSSCCSBC---GGGHH----------HHHTTSSSCSGG---GB--
T ss_pred CCcEEEECCCHHHHHHHHHHHhc-CCCCCeEEEEECCCCCCcc---ccccc----------hhhcCccCCHHH---hh--
Confidence 58999999999999999999997 6 999999998654321 10000 011110000100 00
Q ss_pred ecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 167 KHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 167 ~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
. .+.+.+. +.|++++.+++|+.+..+++.+. +.. + ++..++++|+||+|||..
T Consensus 96 ~-------~~~~~~~-~~gv~v~~~~~v~~i~~~~~~v~-v~~-~------------g~~~~~~~d~lviAtG~~ 148 (490)
T 2bc0_A 96 Y-------SDKEELE-SLGAKVYMESPVQSIDYDAKTVT-ALV-D------------GKNHVETYDKLIFATGSQ 148 (490)
T ss_dssp S-------CCHHHHH-HTTCEEETTCCEEEEETTTTEEE-EEE-T------------TEEEEEECSEEEECCCEE
T ss_pred h-------cCHHHHH-hCCCEEEeCCEEEEEECCCCEEE-EEe-C------------CcEEEEECCEEEECCCCC
Confidence 0 0112222 46899999999998866565432 110 1 123679999999999954
No 194
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.63 E-value=9.7e-08 Score=89.90 Aligned_cols=109 Identities=17% Similarity=0.237 Sum_probs=67.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC--eEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEe
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIK 167 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~--~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~ 167 (321)
.+||+|||||++|+++|..|++. |. +|+|||+.+...... ....+.+ +.. ..... ... .
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~-g~~~~V~lie~~~~~~~~~----~~l~~~~--------~~~-~~~~~---~~~--~ 64 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRAS-GWEGNIRLVGDATVIPHHL----PPLSKAY--------LAG-KATAE---SLY--L 64 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSCCSCCBCS----GGGGTTT--------TTT-CSCSG---GGB--S
T ss_pred CCcEEEEcCHHHHHHHHHHHHcc-CcCCCEEEEECCCCCCCcC----CCCcHHH--------hCC-CCChH---Hhc--c
Confidence 58999999999999999999998 87 899999975432110 0000000 000 00000 000 0
Q ss_pred cHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 168 HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 168 ~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
.+.+.+. +.|++++.+++|+.+..++.. |.+. ++.++.+|.||+|||...
T Consensus 65 -------~~~~~~~-~~gv~~~~~~~v~~i~~~~~~---v~~~--------------~g~~~~~d~lviAtG~~p 114 (431)
T 1q1r_A 65 -------RTPDAYA-AQNIQLLGGTQVTAINRDRQQ---VILS--------------DGRALDYDRLVLATGGRP 114 (431)
T ss_dssp -------SCHHHHH-HTTEEEECSCCEEEEETTTTE---EEET--------------TSCEEECSEEEECCCEEE
T ss_pred -------cCHHHHH-hCCCEEEeCCEEEEEECCCCE---EEEC--------------CCCEEECCEEEEcCCCCc
Confidence 0112222 468999999999888655443 3332 125799999999999754
No 195
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.62 E-value=3.8e-07 Score=82.27 Aligned_cols=138 Identities=15% Similarity=0.211 Sum_probs=89.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.|+|||+|..|+.+|..|++. |.+|.++++.+.+.. . .
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~-g~~V~~v~~~~~~~~--------------~--------------------------~ 191 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDT-ARRITLIHRRPQFRA--------------H--------------------------E 191 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTT-SSEEEEECSSSSCCS--------------C--------------------------H
T ss_pred CEEEEECCCHHHHHHHHHHHhh-CCEEEEEEcCCccCc--------------c--------------------------H
Confidence 4899999999999999999999 999999998753210 0 1
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCCCcchhhh
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK 250 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~~~~~~~~ 250 (321)
...+.+.+.+. +.|++++.++.+.++.. ++++.++.+... .+++..++.+|.||+|+|..... .
T Consensus 192 ~~~~~l~~~l~-~~gv~v~~~~~v~~i~~-~~~~~~v~~~~~---------~~g~~~~i~~D~vi~a~G~~p~~-----~ 255 (335)
T 2zbw_A 192 ASVKELMKAHE-EGRLEVLTPYELRRVEG-DERVRWAVVFHN---------QTQEELALEVDAVLILAGYITKL-----G 255 (335)
T ss_dssp HHHHHHHHHHH-TTSSEEETTEEEEEEEE-SSSEEEEEEEET---------TTCCEEEEECSEEEECCCEEEEC-----G
T ss_pred HHHHHHHhccc-cCCeEEecCCcceeEcc-CCCeeEEEEEEC---------CCCceEEEecCEEEEeecCCCCc-----h
Confidence 12234444444 67999999999999976 455656665310 02234689999999999944321 1
Q ss_pred hhhhcCCcccccCCceeecccccchhhcccccccccccccccchh
Q 020815 251 RLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVA 295 (321)
Q Consensus 251 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~g~~~~ 295 (321)
.+.+.+.. .. ...+.++. ..+...|++|++|+++.
T Consensus 256 ~l~~~~~~--~~-~g~i~vd~-------~~~t~~~~vya~GD~~~ 290 (335)
T 2zbw_A 256 PLANWGLA--LE-KNKIKVDT-------TMATSIPGVYACGDIVT 290 (335)
T ss_dssp GGGGSCCC--EE-TTEEECCT-------TCBCSSTTEEECSTTEE
T ss_pred Hhhhccee--cc-CCeeeeCC-------CCCCCCCCEEEeccccc
Confidence 22232321 11 12232322 12345799999999874
No 196
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.62 E-value=3.3e-07 Score=87.96 Aligned_cols=138 Identities=9% Similarity=0.108 Sum_probs=87.6
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.|+|||+|..|+.+|..|++. |.+|+|+|+.+.+... + ..
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~~l~~---------------------------~-----------d~ 217 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRL-GIDSYIFARGNRILRK---------------------------F-----------DE 217 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTT-TCEEEEECSSSSSCTT---------------------------S-----------CH
T ss_pred CeEEEECChHHHHHHHHHHHHc-CCeEEEEecCCccCcc---------------------------c-----------ch
Confidence 4899999999999999999999 9999999997542110 0 02
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceE-EEcCeEEEcCCCCCCCcchhh
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNV-MEAKVVVSSCGHDGPFGATGV 249 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~-i~a~~VI~AtG~~~~~~~~~~ 249 (321)
.+...+.+.+. +.|++++.+++++++..+++....+...+ +.+ +.+|.||+|+|...... .+
T Consensus 218 ~~~~~l~~~l~-~~gv~i~~~~~v~~i~~~~~~~~~v~~~~--------------g~~~~~~D~vi~a~G~~p~~~--~l 280 (500)
T 1onf_A 218 SVINVLENDMK-KNNINIVTFADVVEIKKVSDKNLSIHLSD--------------GRIYEHFDHVIYCVGRSPDTE--NL 280 (500)
T ss_dssp HHHHHHHHHHH-HTTCEEECSCCEEEEEESSTTCEEEEETT--------------SCEEEEESEEEECCCBCCTTT--TS
T ss_pred hhHHHHHHHHH-hCCCEEEECCEEEEEEEcCCceEEEEECC--------------CcEEEECCEEEECCCCCcCCC--CC
Confidence 33344555554 67999999999999976543223344321 134 99999999999554321 00
Q ss_pred hhhhhcCCcccccCCceeecccccchhhcccccccccccccccchh
Q 020815 250 KRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVA 295 (321)
Q Consensus 250 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~g~~~~ 295 (321)
.+.+.+.. + ....+.++. +.+...|++|+.|+++.
T Consensus 281 -~~~~~g~~--~-~~G~i~vd~-------~~~t~~~~iya~GD~~~ 315 (500)
T 1onf_A 281 -KLEKLNVE--T-NNNYIVVDE-------NQRTSVNNIYAVGDCCM 315 (500)
T ss_dssp -SCTTTTCC--B-SSSCEEECT-------TCBCSSSSEEECSTTEE
T ss_pred -CchhcCcc--c-cCCEEEECC-------CcccCCCCEEEEecccc
Confidence 01122221 1 111122222 22345799999999983
No 197
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.62 E-value=8.1e-08 Score=94.00 Aligned_cols=115 Identities=17% Similarity=0.152 Sum_probs=70.2
Q ss_pred cccEEEECCChHHHHHHHHhhcC-CCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEec
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKH 168 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~-~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~ 168 (321)
..||+|||||++|+++|+.|++. +|.+|+|||+.+..+- ....+. .+ ++-.+....
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~---~~~~lp----------~~---~~g~~~~~~------- 92 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISF---ANCGLP----------YY---IGGVITERQ------- 92 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSB---CGGGHH----------HH---HTTSSCCGG-------
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccc---cCCCCc----------hh---hcCcCCChH-------
Confidence 46999999999999999999984 3789999999876541 110000 00 111000000
Q ss_pred HHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 169 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 169 ~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
..+... ++.+.++.+++++.+++|+++..+++.+..... .+++..++.+|.||+|||..
T Consensus 93 -~~~~~~-~~~~~~~~gi~v~~~~~V~~id~~~~~v~v~~~------------~~g~~~~~~~d~lviAtG~~ 151 (588)
T 3ics_A 93 -KLLVQT-VERMSKRFNLDIRVLSEVVKINKEEKTITIKNV------------TTNETYNEAYDVLILSPGAK 151 (588)
T ss_dssp -GGBSSC-HHHHHHHTTCEEECSEEEEEEETTTTEEEEEET------------TTCCEEEEECSEEEECCCEE
T ss_pred -HhhccC-HHHHHHhcCcEEEECCEEEEEECCCCEEEEeec------------CCCCEEEEeCCEEEECCCCC
Confidence 001111 222223568999999999999776664432111 01233578999999999964
No 198
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.61 E-value=6.3e-07 Score=79.83 Aligned_cols=97 Identities=15% Similarity=0.188 Sum_probs=74.2
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.++|||+|..|+.+|..|++. +.+|.++++.+.+.. . .
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~-g~~v~~~~~~~~~~~---------------------------------------~-~ 186 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANI-CSKIYLIHRRDEFRA---------------------------------------A-P 186 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTT-SSEEEEECSSSSCBS---------------------------------------C-H
T ss_pred CEEEEECCCHHHHHHHHHHHhh-CCEEEEEEeCCCCCC---------------------------------------C-H
Confidence 5899999999999999999999 999999998753200 0 1
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
.+++++.++.|++++.++.+.++..+++++.++.+.. .+|+..++.+|.||+|+|...
T Consensus 187 ----~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~----------~~g~~~~~~~D~vv~a~G~~p 244 (315)
T 3r9u_A 187 ----STVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKL----------KDGSIRDLNVPGIFTFVGLNV 244 (315)
T ss_dssp ----HHHHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEEC----------TTSCEEEECCSCEEECSCEEE
T ss_pred ----HHHHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEc----------CCCCeEEeecCeEEEEEcCCC
Confidence 1223333478999999999999998888888887641 123445899999999999443
No 199
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.61 E-value=1.3e-07 Score=89.35 Aligned_cols=136 Identities=20% Similarity=0.236 Sum_probs=87.3
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-+++|||+|..|+.+|..|++. |.+|+|+++.+.+.... + ..
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~~~--------------------------~-----------~~ 190 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQ-GKNVTMIVRGERVLRRS--------------------------F-----------DK 190 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSTTTTT--------------------------S-----------CH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEEcCCccchhh--------------------------c-----------CH
Confidence 4899999999999999999999 99999999976421100 0 02
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCCCcchhhh
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK 250 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~~~~~~~~ 250 (321)
.+...+.+.+. +. ++++.++.+.++..++ ++..+.. +..++.+|.||+|+|..... .
T Consensus 191 ~~~~~l~~~l~-~~-v~i~~~~~v~~i~~~~-~v~~v~~---------------~g~~i~~D~Vv~a~G~~p~~-----~ 247 (449)
T 3kd9_A 191 EVTDILEEKLK-KH-VNLRLQEITMKIEGEE-RVEKVVT---------------DAGEYKAELVILATGIKPNI-----E 247 (449)
T ss_dssp HHHHHHHHHHT-TT-SEEEESCCEEEEECSS-SCCEEEE---------------TTEEEECSEEEECSCEEECC-----H
T ss_pred HHHHHHHHHHH-hC-cEEEeCCeEEEEeccC-cEEEEEe---------------CCCEEECCEEEEeeCCccCH-----H
Confidence 34455555554 55 9999999999886443 3433433 23689999999999954332 1
Q ss_pred hhhhcCCcccccCCceeecccccchhhcccccccccccccccchhh
Q 020815 251 RLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAE 296 (321)
Q Consensus 251 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~g~~~~~ 296 (321)
.+...+.. +.....+.++. ..+...|++|++|+++..
T Consensus 248 l~~~~gl~--~~~~G~i~vd~-------~~~t~~~~IyA~GD~~~~ 284 (449)
T 3kd9_A 248 LAKQLGVR--IGETGAIWTNE-------KMQTSVENVYAAGDVAET 284 (449)
T ss_dssp HHHHTTCC--BCTTSSBCCCT-------TCBCSSTTEEECSTTBCE
T ss_pred HHHhCCcc--CCCCCCEEECC-------CCccCCCCEEEeeeeeee
Confidence 23333331 11111122221 223467999999998753
No 200
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.61 E-value=7e-07 Score=85.38 Aligned_cols=103 Identities=16% Similarity=0.224 Sum_probs=74.2
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.|+|||+|..|+..|..|++. |.+|+|+|+.+.+... ...
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~~--------------------------------------~d~ 239 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARL-GAKVTVVEFLDTILGG--------------------------------------MDG 239 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSSSSSS--------------------------------------SCH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCEEEEEecccccccc--------------------------------------CCH
Confidence 4799999999999999999999 9999999987642110 012
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~ 243 (321)
.+.+.+.+.+. +.|++++.+++++++..+++.+. +...+ . .+|+..++.+|.||+|+|....
T Consensus 240 ~~~~~l~~~l~-~~gV~v~~~~~v~~i~~~~~~~~-v~~~~------~---~~g~~~~i~~D~Vi~a~G~~p~ 301 (491)
T 3urh_A 240 EVAKQLQRMLT-KQGIDFKLGAKVTGAVKSGDGAK-VTFEP------V---KGGEATTLDAEVVLIATGRKPS 301 (491)
T ss_dssp HHHHHHHHHHH-HTTCEEECSEEEEEEEEETTEEE-EEEEE------T---TSCCCEEEEESEEEECCCCEEC
T ss_pred HHHHHHHHHHH-hCCCEEEECCeEEEEEEeCCEEE-EEEEe------c---CCCceEEEEcCEEEEeeCCccC
Confidence 34445555554 67999999999999988777543 33321 0 0123468999999999995443
No 201
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.61 E-value=1.1e-07 Score=87.57 Aligned_cols=105 Identities=17% Similarity=0.190 Sum_probs=64.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecH
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 169 (321)
..||+|||||++|+++|..|++. | +|+|||+..... +.... . ...+.. .++++... ..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~-g-~V~lie~~~~~~---~~~~~-l---------~~~~~g-~~~~~~~~-----~~- 65 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQT-Y-EVTVIDKEPVPY---YSKPM-L---------SHYIAG-FIPRNRLF-----PY- 65 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTT-S-EEEEECSSSSCC---CCSTT-H---------HHHHTT-SSCGGGGC-----SS-
T ss_pred CCcEEEECCcHHHHHHHHHHhhc-C-CEEEEECCCCCc---cccch-h---------HHHHhC-CCCHHHhc-----cC-
Confidence 36999999999999999999999 8 999999986432 10000 0 011110 01111100 00
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
+.+.+. +.|++++.+++|+.+..++..+. . +..++.+|++|+|||..
T Consensus 66 ------~~~~~~-~~~v~~~~g~~v~~id~~~~~V~---~---------------~g~~~~~d~lViATGs~ 112 (367)
T 1xhc_A 66 ------SLDWYR-KRGIEIRLAEEAKLIDRGRKVVI---T---------------EKGEVPYDTLVLATGAR 112 (367)
T ss_dssp ------CHHHHH-HHTEEEECSCCEEEEETTTTEEE---E---------------SSCEEECSEEEECCCEE
T ss_pred ------CHHHHH-hCCcEEEECCEEEEEECCCCEEE---E---------------CCcEEECCEEEECCCCC
Confidence 011111 45899999988888754443322 1 12579999999999964
No 202
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.60 E-value=5.4e-07 Score=85.72 Aligned_cols=105 Identities=16% Similarity=0.136 Sum_probs=73.0
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.|+|||+|..|+.+|..|++. |.+|+|+|+.+.+.... + ..
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~~~--------------------------~-----------~~ 220 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRL-GADVTAVEFLGHVGGVG--------------------------I-----------DM 220 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSSCSS--------------------------C-----------CH
T ss_pred ceEEEECCCHHHHHHHHHHHHc-CCEEEEEeccCccCCcc--------------------------c-----------CH
Confidence 4899999999999999999999 99999999975421100 0 12
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~ 243 (321)
++...+.+.+. +.|++++.+++++++..+++....+.... . ..++..++.+|.||+|+|....
T Consensus 221 ~~~~~l~~~l~-~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~------~---~~~~~~~i~~D~vv~a~G~~p~ 283 (474)
T 1zmd_A 221 EISKNFQRILQ-KQGFKFKLNTKVTGATKKSDGKIDVSIEA------A---SGGKAEVITCDVLLVCIGRRPF 283 (474)
T ss_dssp HHHHHHHHHHH-HTTCEEECSEEEEEEEECTTSCEEEEEEE------T---TSCCCEEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHH-HCCCEEEeCceEEEEEEcCCceEEEEEEe------c---CCCCceEEEcCEEEECcCCCcC
Confidence 33445555554 57999999999999987665412233210 0 0113468999999999995543
No 203
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.60 E-value=2.1e-08 Score=95.24 Aligned_cols=40 Identities=33% Similarity=0.455 Sum_probs=36.4
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCc
Q 020815 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGG 129 (321)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~ 129 (321)
..+||+|||||++|+++|+.|++. |++|+|+|+.+.+||.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~-G~~V~v~e~~~~~GG~ 160 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK-GYEVHVYDRYDRMGGL 160 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-TCCEEEECSSSSCSTH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeccCCCCCe
Confidence 358999999999999999999999 9999999998877763
No 204
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.59 E-value=3.2e-07 Score=87.14 Aligned_cols=97 Identities=14% Similarity=0.153 Sum_probs=71.2
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.|+|||+|..|+.+|..|++. |.+|+|+|+.+.+... + ..
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~-G~~Vtlv~~~~~~l~~---------------------------~-----------~~ 207 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSF-GSEVTVVALEDRLLFQ---------------------------F-----------DP 207 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSSTT---------------------------S-----------CH
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCEEEEEEcCCccccc---------------------------c-----------CH
Confidence 4799999999999999999999 9999999987532100 0 01
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCce-EEEcCeEEEcCCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPN-VMEAKVVVSSCGHDG 242 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~-~i~a~~VI~AtG~~~ 242 (321)
.+...+.+.+. +.|++++.+++++++..+++. ..+.+.+ +. ++.+|.||+|+|...
T Consensus 208 ~~~~~l~~~l~-~~gv~i~~~~~v~~i~~~~~~-~~v~~~~--------------G~~~i~~D~vv~a~G~~p 264 (463)
T 2r9z_A 208 LLSATLAENMH-AQGIETHLEFAVAALERDAQG-TTLVAQD--------------GTRLEGFDSVIWAVGRAP 264 (463)
T ss_dssp HHHHHHHHHHH-HTTCEEESSCCEEEEEEETTE-EEEEETT--------------CCEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHH-HCCCEEEeCCEEEEEEEeCCe-EEEEEeC--------------CcEEEEcCEEEECCCCCc
Confidence 23344445554 579999999999999877664 3344421 24 799999999999544
No 205
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.59 E-value=9.4e-07 Score=79.47 Aligned_cols=97 Identities=21% Similarity=0.251 Sum_probs=71.4
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.|+|||+|..|+.+|..|++. |.+|+++++.+.+.. .
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~~~---------------------------------------~-- 190 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKF-ADEVTVIHRRDTLRA---------------------------------------N-- 190 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT-CSEEEEECSSSSCCS---------------------------------------C--
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCEEEEEeCCCcCCc---------------------------------------c--
Confidence 5799999999999999999999 999999998753210 0
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
..+.+++.++.|++++.+++++++.. ++++.+|.+... .+|+..++.+|.||+|+|...
T Consensus 191 ---~~~~~~l~~~~gv~i~~~~~v~~i~~-~~~v~~v~~~~~---------~~g~~~~i~~D~vi~a~G~~p 249 (325)
T 2q7v_A 191 ---KVAQARAFANPKMKFIWDTAVEEIQG-ADSVSGVKLRNL---------KTGEVSELATDGVFIFIGHVP 249 (325)
T ss_dssp ---HHHHHHHHTCTTEEEECSEEEEEEEE-SSSEEEEEEEET---------TTCCEEEEECSEEEECSCEEE
T ss_pred ---hHHHHHHHhcCCceEecCCceEEEcc-CCcEEEEEEEEC---------CCCcEEEEEcCEEEEccCCCC
Confidence 12334454457999999999999976 455666766420 122345899999999999443
No 206
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.58 E-value=1.4e-07 Score=92.38 Aligned_cols=135 Identities=14% Similarity=0.196 Sum_probs=87.7
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.++|||+|..|+.+|..|++. |.+|+++++.+.+... + ..
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~---------------------------~-----------~~ 228 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRER-GIEVTLVEMANQVMPP---------------------------I-----------DY 228 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSCTT---------------------------S-----------CH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEecCCccccc---------------------------C-----------CH
Confidence 4899999999999999999999 9999999987532110 0 12
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCCCcchhhh
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK 250 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~~~~~~~~ 250 (321)
.+...+.+.+. +.|++++.++.++++..+++ +|... ++.++.+|.||+|+|..... .
T Consensus 229 ~~~~~l~~~l~-~~GV~i~~~~~v~~i~~~~~---~v~~~--------------~g~~i~~D~Vi~a~G~~p~~-----~ 285 (588)
T 3ics_A 229 EMAAYVHEHMK-NHDVELVFEDGVDALEENGA---VVRLK--------------SGSVIQTDMLILAIGVQPES-----S 285 (588)
T ss_dssp HHHHHHHHHHH-HTTCEEECSCCEEEEEGGGT---EEEET--------------TSCEEECSEEEECSCEEECC-----H
T ss_pred HHHHHHHHHHH-HcCCEEEECCeEEEEecCCC---EEEEC--------------CCCEEEcCEEEEccCCCCCh-----H
Confidence 33445555554 67999999999999865444 34442 22579999999999954332 1
Q ss_pred hhhhcCCcccccCCceeecccccchhhcccccccccccccccchhh
Q 020815 251 RLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAE 296 (321)
Q Consensus 251 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~g~~~~~ 296 (321)
.+...+.. +.....+.++ ...+...|++|++|+++..
T Consensus 286 ~l~~~g~~--~~~~g~i~vd-------~~~~t~~~~IyA~GD~~~~ 322 (588)
T 3ics_A 286 LAKGAGLA--LGVRGTIKVN-------EKFQTSDPHIYAIGDAIEV 322 (588)
T ss_dssp HHHHTTCC--BCGGGCBCCC-------TTSBCSSTTEEECGGGBCE
T ss_pred HHHhcCce--EcCCCCEEEC-------CccccCCCCEEEeeeeeec
Confidence 23333331 1111112222 1233457999999998743
No 207
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.58 E-value=6e-07 Score=85.69 Aligned_cols=101 Identities=12% Similarity=0.059 Sum_probs=71.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.++|||||..|+.+|..|++. |.+|+|+|+.+.+... + ..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~-G~~Vtlv~~~~~~l~~---------------------------~-----------~~ 226 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTL-GSRLDVVEMMDGLMQG---------------------------A-----------DR 226 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHH-TCEEEEECSSSSSSTT---------------------------S-----------CH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEECCccccc---------------------------c-----------CH
Confidence 4899999999999999999999 9999999997542110 0 12
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
++...+.+.+. +.|++++.++++.++..+++.+ .+.+.+ .. +++.++.+|.||+|+|...
T Consensus 227 ~~~~~l~~~l~-~~gV~i~~~~~v~~i~~~~~~~-~v~~~~------~~----~~g~~~~~D~vv~a~G~~p 286 (482)
T 1ojt_A 227 DLVKVWQKQNE-YRFDNIMVNTKTVAVEPKEDGV-YVTFEG------AN----APKEPQRYDAVLVAAGRAP 286 (482)
T ss_dssp HHHHHHHHHHG-GGEEEEECSCEEEEEEEETTEE-EEEEES------SS----CCSSCEEESCEEECCCEEE
T ss_pred HHHHHHHHHHH-hcCCEEEECCEEEEEEEcCCeE-EEEEec------cC----CCceEEEcCEEEECcCCCc
Confidence 33444455554 6799999999999998776542 333321 00 0125688999999999443
No 208
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.57 E-value=6.2e-07 Score=85.08 Aligned_cols=101 Identities=19% Similarity=0.270 Sum_probs=71.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.|+|||||..|+.+|..|++. |.+|+|+|+.+.+... + ..
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~~---------------------------~-----------~~ 212 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNY-GVDVTIVEFLPRALPN---------------------------E-----------DA 212 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSSTT---------------------------S-----------CH
T ss_pred CeEEEECCcHHHHHHHHHHHHc-CCeEEEEEcCCccccc---------------------------c-----------CH
Confidence 4899999999999999999999 9999999997542110 0 02
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~ 243 (321)
.+...+.+.+. +.|++++.+++++++..+++.+. +.... +++..++.+|.||+|+|....
T Consensus 213 ~~~~~l~~~l~-~~gv~i~~~~~v~~i~~~~~~~~-v~~~~-----------~g~~~~~~~D~vv~a~G~~p~ 272 (464)
T 2a8x_A 213 DVSKEIEKQFK-KLGVTILTATKVESIADGGSQVT-VTVTK-----------DGVAQELKAEKVLQAIGFAPN 272 (464)
T ss_dssp HHHHHHHHHHH-HHTCEEECSCEEEEEEECSSCEE-EEEES-----------SSCEEEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHH-HcCCEEEeCcEEEEEEEcCCeEE-EEEEc-----------CCceEEEEcCEEEECCCCCcc
Confidence 23344444454 57999999999999986655432 33210 123367999999999995443
No 209
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.57 E-value=3.8e-07 Score=86.97 Aligned_cols=99 Identities=13% Similarity=0.138 Sum_probs=70.9
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.++|||||..|+.+|..|++. |.+|+|+|+.+.+... + ..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~~l~~---------------------------~-----------d~ 226 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGL-GSETHLVIRGETVLRK---------------------------F-----------DE 226 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHT-TCEEEEECSSSSSCTT---------------------------S-----------CH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCceEEEEeCCccccc---------------------------c-----------CH
Confidence 4899999999999999999999 9999999997542110 0 02
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCE-EEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGR-VGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~-v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
.+.+.+.+.+. +.|++++.+++++++..+++. +..+.+.+ |+ .++.+|.||+|+|...
T Consensus 227 ~~~~~l~~~l~-~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~------------G~-~~i~~D~vv~a~G~~p 285 (479)
T 2hqm_A 227 CIQNTITDHYV-KEGINVHKLSKIVKVEKNVETDKLKIHMND------------SK-SIDDVDELIWTIGRKS 285 (479)
T ss_dssp HHHHHHHHHHH-HHTCEEECSCCEEEEEECC-CCCEEEEETT------------SC-EEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHH-hCCeEEEeCCEEEEEEEcCCCcEEEEEECC------------Cc-EEEEcCEEEECCCCCC
Confidence 23344455554 579999999999999765432 34444421 12 5799999999999543
No 210
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.57 E-value=2.1e-07 Score=86.73 Aligned_cols=108 Identities=18% Similarity=0.181 Sum_probs=66.2
Q ss_pred cEEEECCChHHHHHHHHhhc---CCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEec
Q 020815 92 DVVVVGAGSAGLSCAYELSK---NPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKH 168 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~---~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~ 168 (321)
||+|||||++|+++|+.|++ . |.+|+|||+++...... ... ...........+ ..
T Consensus 3 ~VvIIGgG~aGl~aA~~L~~~~~~-g~~V~vie~~~~~~~~~----~~~--------------~~~~~~~~~~~~--~~- 60 (409)
T 3h8l_A 3 KVLVLGGRFGALTAAYTLKRLVGS-KADVKVINKSRFSYFRP----ALP--------------HVAIGVRDVDEL--KV- 60 (409)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHGG-GSEEEEEESSSEEEECC----SSC--------------CCCSSCCCCCCE--EE-
T ss_pred eEEEECCCHHHHHHHHHHHhhCCC-CCeEEEEeCCCCceecc----chh--------------hcccCCcCHHHH--HH-
Confidence 79999999999999999999 7 99999999986331110 000 000000011111 11
Q ss_pred HHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 169 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 169 ~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
.+.+.+ ++.+++++.+ +|+.+..++.. |.+.++ .+...++.+|.||+|+|...
T Consensus 61 ------~~~~~~-~~~gv~~~~~-~v~~i~~~~~~---V~~~~g----------~~~~~~~~~d~lViAtG~~~ 113 (409)
T 3h8l_A 61 ------DLSEAL-PEKGIQFQEG-TVEKIDAKSSM---VYYTKP----------DGSMAEEEYDYVIVGIGAHL 113 (409)
T ss_dssp ------EHHHHT-GGGTCEEEEC-EEEEEETTTTE---EEEECT----------TSCEEEEECSEEEECCCCEE
T ss_pred ------HHHHHH-hhCCeEEEEe-eEEEEeCCCCE---EEEccC----------CcccceeeCCEEEECCCCCc
Confidence 112222 3568999988 88888665553 333221 11235699999999999743
No 211
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.56 E-value=3.1e-07 Score=87.28 Aligned_cols=102 Identities=19% Similarity=0.216 Sum_probs=72.0
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.|+|||+|..|+.+|..|++. |.+|+|+|+.+.+... ...
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtli~~~~~~l~~--------------------------------------~~~ 218 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRI-GSEVTVVEFASEIVPT--------------------------------------MDA 218 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHH-TCEEEEECSSSSSSTT--------------------------------------SCH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCCccccc--------------------------------------ccH
Confidence 4899999999999999999999 9999999998542110 002
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
.+.+.+.+.+. +.|++++.++++.++..+++.+ .+.+.. . .+++..++.+|.||+|+|...
T Consensus 219 ~~~~~l~~~l~-~~gv~i~~~~~v~~i~~~~~~~-~v~~~~------~---~~g~~~~~~~D~vv~a~G~~p 279 (470)
T 1dxl_A 219 EIRKQFQRSLE-KQGMKFKLKTKVVGVDTSGDGV-KLTVEP------S---AGGEQTIIEADVVLVSAGRTP 279 (470)
T ss_dssp HHHHHHHHHHH-HSSCCEECSEEEEEEECSSSSE-EEEEEE------S---SSCCCEEEEESEEECCCCEEE
T ss_pred HHHHHHHHHHH-HcCCEEEeCCEEEEEEEcCCeE-EEEEEe------c---CCCcceEEECCEEEECCCCCc
Confidence 33444555554 5799999999999987655433 233321 0 012346899999999999543
No 212
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.56 E-value=1.3e-06 Score=77.86 Aligned_cols=138 Identities=20% Similarity=0.243 Sum_probs=90.2
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecH
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 169 (321)
.-.|+|||+|..|+.+|..|++. +.+|+++++...+.. .
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~-g~~v~~~~~~~~~~~---------------------------------------~- 192 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSY-STKVYLIHRRDTFKA---------------------------------------Q- 192 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-SSEEEEECSSSSCCS---------------------------------------C-
T ss_pred CCEEEEECCCHHHHHHHHHHHHh-CCeEEEEEeCCCCCc---------------------------------------C-
Confidence 35899999999999999999999 999999998753211 0
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCCCcchhh
Q 020815 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGV 249 (321)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~~~~~~~ 249 (321)
..+++++.++.|++++.++.++++..+ +++.++.+.+. .+|+..++.+|.||+|+|.... .
T Consensus 193 ----~~~~~~~~~~~gv~~~~~~~v~~i~~~-~~~~~v~~~~~---------~~g~~~~~~~D~vv~a~G~~p~-----~ 253 (323)
T 3f8d_A 193 ----PIYVETVKKKPNVEFVLNSVVKEIKGD-KVVKQVVVENL---------KTGEIKELNVNGVFIEIGFDPP-----T 253 (323)
T ss_dssp ----HHHHHHHHTCTTEEEECSEEEEEEEES-SSEEEEEEEET---------TTCCEEEEECSEEEECCCEECC-----H
T ss_pred ----HHHHHHHHhCCCcEEEeCCEEEEEecc-CceeEEEEEEC---------CCCceEEEEcCEEEEEECCCCC-----h
Confidence 123445554569999999999998765 55666666430 1123458999999999994433 1
Q ss_pred hhhhhcCCcccccCCceeecccccchhhcccccccccccccccchhh
Q 020815 250 KRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAE 296 (321)
Q Consensus 250 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~g~~~~~ 296 (321)
..+...+.. +.....+..+. ..+...|++|++|+++..
T Consensus 254 ~~~~~~g~~--~~~~g~i~vd~-------~~~t~~~~vya~GD~~~~ 291 (323)
T 3f8d_A 254 DFAKSNGIE--TDTNGYIKVDE-------WMRTSVPGVFAAGDCTSA 291 (323)
T ss_dssp HHHHHTTCC--BCTTSSBCCCT-------TCBCSSTTEEECSTTBST
T ss_pred hHHhhcCee--ecCCCcEecCC-------CceecCCCEEEcceecCC
Confidence 223333321 11112222222 123457999999998743
No 213
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.55 E-value=1.3e-07 Score=89.54 Aligned_cols=115 Identities=11% Similarity=0.083 Sum_probs=68.0
Q ss_pred ccEEEECCChHHHHHHHHhhcC-CCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCC-cccCCCeEEEec
Q 020815 91 TDVVVVGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGID-YDEQDNYVVIKH 168 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~-~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~-~~~~~~~~~~~~ 168 (321)
+||+|||||++|+++|..|++. +|.+|+|||+....+.. ...+. .++... +. ++.. .+
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~---~~~~~----------~~~~g~-~~~~~~~-~~----- 60 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFL---SCGIA----------LYLGKE-IKNNDPR-GL----- 60 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBC---GGGHH----------HHHTTC-BGGGCGG-GG-----
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcc---cccch----------hhhcCC-cccCCHH-Hh-----
Confidence 4899999999999999999984 38999999998654321 00000 011000 00 0000 00
Q ss_pred HHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 169 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 169 ~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
...+.+.+. +.|++++.++++..+..+++.+. +.+ . .+++..++++|++|+|||...
T Consensus 61 ----~~~~~~~~~-~~gv~~~~~~~v~~i~~~~~~v~---v~~------~---~~g~~~~~~~d~lviAtGs~p 117 (452)
T 2cdu_A 61 ----FYSSPEELS-NLGANVQMRHQVTNVDPETKTIK---VKD------L---ITNEEKTEAYDKLIMTTGSKP 117 (452)
T ss_dssp ----BSCCHHHHH-HTTCEEEESEEEEEEEGGGTEEE---EEE------T---TTCCEEEEECSEEEECCCEEE
T ss_pred ----hhcCHHHHH-HcCCEEEeCCEEEEEEcCCCEEE---EEe------c---CCCceEEEECCEEEEccCCCc
Confidence 001112222 46899999988988866555432 211 0 011236799999999999543
No 214
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.54 E-value=3.1e-07 Score=86.74 Aligned_cols=112 Identities=17% Similarity=0.156 Sum_probs=66.7
Q ss_pred cEEEECCChHHHHHHHHhhcC-CCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 92 DVVVVGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~-~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
||+|||||++|+++|..|++. +|.+|+|||+.+..+. + ...+. .++...-..+.. .
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~--~-~~~~~----------~~~~~~~~~~~~---~------- 58 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISF--L-SAGMQ----------LYLEGKVKDVNS---V------- 58 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSB--C-GGGHH----------HHHTTSSCCGGG---S-------
T ss_pred eEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCc--c-cccch----------hhhcCccCCHHH---h-------
Confidence 899999999999999999983 3799999999865431 1 10000 011100001111 0
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
...+.+.+. +.|++++.++.++.+..+++.+. +.. . .+++..++++|++|+|||..
T Consensus 59 --~~~~~~~~~-~~gv~~~~~~~v~~i~~~~~~v~---~~~------~---~~g~~~~~~~d~lviAtG~~ 114 (447)
T 1nhp_A 59 --RYMTGEKME-SRGVNVFSNTEITAIQPKEHQVT---VKD------L---VSGEERVENYDKLIISPGAV 114 (447)
T ss_dssp --BSCCHHHHH-HTTCEEEETEEEEEEETTTTEEE---EEE------T---TTCCEEEEECSEEEECCCEE
T ss_pred --hcCCHHHHH-HCCCEEEECCEEEEEeCCCCEEE---EEe------c---CCCceEEEeCCEEEEcCCCC
Confidence 001112222 35899999999988866665432 211 0 01122468999999999954
No 215
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.54 E-value=1.3e-07 Score=90.91 Aligned_cols=34 Identities=24% Similarity=0.360 Sum_probs=32.4
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
+||++|||+|++|+.+|++|++. |.+|+|||++.
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~-~~~v~~~e~~~ 38 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEA-GVQTLMLEMGQ 38 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCcEEEEeCCC
Confidence 68999999999999999999998 99999999876
No 216
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.53 E-value=2.5e-07 Score=89.93 Aligned_cols=114 Identities=13% Similarity=0.047 Sum_probs=68.5
Q ss_pred ccEEEECCChHHHHHHHHhhcC-CCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~-~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 169 (321)
.||+|||||++|+++|+.|++. ++.+|+|||+.+..+-. ...+. .++ .-.+...... +...
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~---~~~l~----------~~~---~~~~~~~~~~-~~~~- 63 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFA---NCGLP----------YHI---SGEIAQRSAL-VLQT- 63 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBC---GGGHH----------HHH---TSSSCCGGGG-BCCC-
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcccc---ccCch----------HHh---cCCcCChHHh-hccC-
Confidence 3899999999999999999984 37899999998765411 10000 000 0000000000 0001
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
.+.+.++.+++++.+++|+++..+++.+..... .+++..++.+|+||+|||..
T Consensus 64 -------~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~~------------~~g~~~~~~~d~lviAtG~~ 116 (565)
T 3ntd_A 64 -------PESFKARFNVEVRVKHEVVAIDRAAKLVTVRRL------------LDGSEYQESYDTLLLSPGAA 116 (565)
T ss_dssp -------HHHHHHHHCCEEETTEEEEEEETTTTEEEEEET------------TTCCEEEEECSEEEECCCEE
T ss_pred -------HHHHHHhcCcEEEECCEEEEEECCCCEEEEEec------------CCCCeEEEECCEEEECCCCC
Confidence 111222358999999999999766664432111 11233589999999999964
No 217
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.52 E-value=8.4e-08 Score=95.40 Aligned_cols=40 Identities=30% Similarity=0.504 Sum_probs=36.7
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCcc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA 130 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~ 130 (321)
.+||+|||||++|+.+|+.|++. |.+|+|||+.+..||..
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~-g~~V~lie~~~~~gg~~ 412 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAAR-GHQVTLFDAHSEIGGQF 412 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSSSCTTH
T ss_pred CCeEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCCCCee
Confidence 57999999999999999999999 99999999988777753
No 218
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.52 E-value=1.2e-06 Score=83.30 Aligned_cols=102 Identities=14% Similarity=0.184 Sum_probs=71.7
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.++|||+|..|+.+|..|++. |.+|+|+|+.+.+... + ..
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~~---------------------------~-----------d~ 215 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARL-GAEVTVVEFAPRCAPT---------------------------L-----------DE 215 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSSTT---------------------------S-----------CH
T ss_pred ceEEEECCCHHHHHHHHHHHHh-CCEEEEEecCCccccc---------------------------C-----------CH
Confidence 5899999999999999999999 9999999997542110 0 02
Q ss_pred HHHHHHHHHH-HcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCC
Q 020815 171 LFTSTIMSKL-LARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (321)
Q Consensus 171 ~~~~~l~~~~-~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~ 243 (321)
.+.+.+.+.+ . +.|++++.+++++++..+++.+ .+.+.. .+|+..++.+|.||+|+|....
T Consensus 216 ~~~~~l~~~l~~-~~gv~i~~~~~v~~i~~~~~~~-~v~~~~----------~~g~~~~i~~D~vv~a~G~~p~ 277 (468)
T 2qae_A 216 DVTNALVGALAK-NEKMKFMTSTKVVGGTNNGDSV-SLEVEG----------KNGKRETVTCEALLVSVGRRPF 277 (468)
T ss_dssp HHHHHHHHHHHH-HTCCEEECSCEEEEEEECSSSE-EEEEEC----------C---EEEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHhh-cCCcEEEeCCEEEEEEEcCCeE-EEEEEc----------CCCceEEEECCEEEECCCcccC
Confidence 3344555555 4 5799999999999998765533 233310 0122367999999999995543
No 219
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.52 E-value=1.6e-07 Score=88.60 Aligned_cols=104 Identities=18% Similarity=0.319 Sum_probs=65.8
Q ss_pred ccEEEECCChHHHHHHHHhhc---CCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEe
Q 020815 91 TDVVVVGAGSAGLSCAYELSK---NPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIK 167 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~---~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~ 167 (321)
.||||||||++|+++|+.|++ . |.+|+|||+.+...- . ....++.. +..
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~-g~~Vtlie~~~~~~~---------~------~~~~~~~~-g~~----------- 56 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGS-GHEVTLISANDYFQF---------V------PSNPWVGV-GWK----------- 56 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGG-GSEEEEECSSSEEEC---------G------GGHHHHHH-TSS-----------
T ss_pred CcEEEECCcHHHHHHHHHHhccCCC-cCEEEEEeCCCCCcc---------c------CCcccccc-Ccc-----------
Confidence 599999999999999999999 7 999999999863110 0 00001100 100
Q ss_pred cHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 168 HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 168 ~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
...++...+.+.+. +.|++++.. +|+.+..+++. |.+. +..++.+|+||+|+|..
T Consensus 57 ~~~~~~~~l~~~~~-~~gv~~~~~-~v~~id~~~~~---V~~~--------------~g~~i~~d~lviAtG~~ 111 (437)
T 3sx6_A 57 ERDDIAFPIRHYVE-RKGIHFIAQ-SAEQIDAEAQN---ITLA--------------DGNTVHYDYLMIATGPK 111 (437)
T ss_dssp CHHHHEEECHHHHH-TTTCEEECS-CEEEEETTTTE---EEET--------------TSCEEECSEEEECCCCE
T ss_pred CHHHHHHHHHHHHH-HCCCEEEEe-EEEEEEcCCCE---EEEC--------------CCCEEECCEEEECCCCC
Confidence 11122222233333 679999864 88888655553 3332 22579999999999964
No 220
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.51 E-value=1.9e-06 Score=76.83 Aligned_cols=135 Identities=16% Similarity=0.191 Sum_probs=87.7
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.|+|||+|..|+.+|..|++. |.+|+|+|+....-. . .
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~-G~~Vt~v~~~~~~~~---------------------------------------~-~ 191 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKY-GSKVIILHRRDAFRA---------------------------------------S-K 191 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTT-SSEEEEECSSSSCCS---------------------------------------C-H
T ss_pred CeEEEECCChHHHHHHHHHHHh-CCeeeeecccccccc---------------------------------------c-c
Confidence 4799999999999999999999 999999998642100 0 0
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCCCcchhhh
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK 250 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~~~~~~~~ 250 (321)
.+..+.....+++.+....+.++...++...++..... ..++..++.+|.||+|+|......
T Consensus 192 ----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---------~~~~~~~i~~d~vi~a~G~~pn~~----- 253 (314)
T 4a5l_A 192 ----TMQERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNL---------VSGEYKVVPVAGLFYAIGHSPNSK----- 253 (314)
T ss_dssp ----HHHHHHHTCTTEEEECSEEEEEEEESSSSEEEEEEEET---------TTCCEEEEECSEEEECSCEEESCG-----
T ss_pred ----hhhhhhhcccceeeEeeeeeEEEEeeeeccceeEEeec---------ccccceeeccccceEecccccChh-----
Confidence 11222334678888888888888877766667666431 122457899999999999443211
Q ss_pred hhhhcCCcccccCCceeecccccchhhcccccccccccccccchh
Q 020815 251 RLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVA 295 (321)
Q Consensus 251 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~g~~~~ 295 (321)
.+. .+ ...+.....+....+...||+|++||.+.
T Consensus 254 ~l~-~~----------~~~~~~G~iv~~~~~Ts~pgIyA~GDv~~ 287 (314)
T 4a5l_A 254 FLG-GQ----------VKTADDGYILTEGPKTSVDGVFACGDVCD 287 (314)
T ss_dssp GGT-TS----------SCBCTTSCBCCBTTBCSSTTEEECSTTTC
T ss_pred Hhc-cc----------ceEcCCeeEeCCCCccCCCCEEEEEeccC
Confidence 111 11 11111111122334567899999999873
No 221
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.50 E-value=1.2e-06 Score=83.77 Aligned_cols=99 Identities=17% Similarity=0.268 Sum_probs=70.6
Q ss_pred ccEEEECCChHHHHHHHHhhc----CCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEE
Q 020815 91 TDVVVVGAGSAGLSCAYELSK----NPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVI 166 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~----~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 166 (321)
-.|+|||||..|+.+|..|++ . |.+|+++++.+.+.....
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~~-g~~V~~v~~~~~~~~~~l----------------------------------- 224 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARAL-GTEVIQLFPEKGNMGKIL----------------------------------- 224 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHH-TCEEEEECSSSSTTTTTS-----------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhhc-CCEEEEEecCcccccccC-----------------------------------
Confidence 479999999999999999876 4 788999998643211000
Q ss_pred ecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCC
Q 020815 167 KHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (321)
Q Consensus 167 ~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~ 243 (321)
...+...+.+.+. +.|++++.++.|+++..+++.+ .|.+. ++.++.||.||+|+|....
T Consensus 225 --~~~~~~~~~~~l~-~~GV~v~~~~~V~~i~~~~~~~-~v~l~--------------dG~~i~aD~Vv~a~G~~pn 283 (493)
T 1m6i_A 225 --PEYLSNWTMEKVR-REGVKVMPNAIVQSVGVSSGKL-LIKLK--------------DGRKVETDHIVAAVGLEPN 283 (493)
T ss_dssp --CHHHHHHHHHHHH-TTTCEEECSCCEEEEEEETTEE-EEEET--------------TSCEEEESEEEECCCEEEC
T ss_pred --CHHHHHHHHHHHH-hcCCEEEeCCEEEEEEecCCeE-EEEEC--------------CCCEEECCEEEECCCCCcc
Confidence 0223344445554 7899999999999998776654 45442 2268999999999995543
No 222
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.49 E-value=1.4e-06 Score=82.66 Aligned_cols=96 Identities=9% Similarity=0.152 Sum_probs=71.9
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.|+|||+|..|+.+|..|++. |.+|+++|+.+.+-. + ..
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~----------------------------~-----------~~ 216 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARL-GSKVTVLARNTLFFR----------------------------E-----------DP 216 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCTTTT----------------------------S-----------CH
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCEEEEEEECCccCC----------------------------C-----------CH
Confidence 4899999999999999999999 999999999753210 0 02
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~ 243 (321)
.+.+.+.+.+. +.|++++.+++|+++..+++. ..+.+. ..++.+|.||+|+|....
T Consensus 217 ~~~~~l~~~l~-~~Gv~i~~~~~v~~i~~~~~~-~~v~~~---------------~~~i~aD~Vv~a~G~~p~ 272 (467)
T 1zk7_A 217 AIGEAVTAAFR-AEGIEVLEHTQASQVAHMDGE-FVLTTT---------------HGELRADKLLVATGRTPN 272 (467)
T ss_dssp HHHHHHHHHHH-HTTCEEETTCCEEEEEEETTE-EEEEET---------------TEEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHH-hCCCEEEcCCEEEEEEEeCCE-EEEEEC---------------CcEEEcCEEEECCCCCcC
Confidence 34455555555 579999999999999876653 234431 257999999999995443
No 223
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.49 E-value=5.1e-07 Score=85.60 Aligned_cols=98 Identities=20% Similarity=0.210 Sum_probs=69.2
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-+|+|||||.+|+.+|..|++. |.+|+|+|+.+.+... + ..
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~---------------------------~-----------~~ 212 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKL-GAQVSVVEARERILPT---------------------------Y-----------DS 212 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSSSSTT---------------------------S-----------CH
T ss_pred CeEEEECcCHHHHHHHHHHHHC-CCeEEEEEcCCccccc---------------------------c-----------CH
Confidence 4899999999999999999999 9999999998643210 0 02
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~ 243 (321)
.+...+.+.+. +.|++++.+++++++.. +++ .+.. .+|+..++.+|.||+|+|....
T Consensus 213 ~~~~~l~~~l~-~~gv~i~~~~~v~~i~~--~~v-~v~~------------~~G~~~~i~~D~vv~a~G~~p~ 269 (458)
T 1lvl_A 213 ELTAPVAESLK-KLGIALHLGHSVEGYEN--GCL-LAND------------GKGGQLRLEADRVLVAVGRRPR 269 (458)
T ss_dssp HHHHHHHHHHH-HHTCEEETTCEEEEEET--TEE-EEEC------------SSSCCCEECCSCEEECCCEEEC
T ss_pred HHHHHHHHHHH-HCCCEEEECCEEEEEEe--CCE-EEEE------------CCCceEEEECCEEEECcCCCcC
Confidence 23334444454 56999999999999864 332 1221 1123367999999999995443
No 224
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.48 E-value=1.7e-06 Score=82.24 Aligned_cols=99 Identities=15% Similarity=0.110 Sum_probs=71.7
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.|+|||+|..|+..|..|++. |.+|+++++.+.+... + ..
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~---------------------------~-----------~~ 221 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARL-GAEVTVLEAMDKFLPA---------------------------V-----------DE 221 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSSSTT---------------------------S-----------CH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCcEEEEecCCCcCcc---------------------------c-----------CH
Confidence 4799999999999999999999 9999999997532110 0 12
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
.+.+.+.+.+. +.|++++.+++++++..+++.+. +...++ ++ ..++.+|.||+|+|..
T Consensus 222 ~~~~~l~~~l~-~~Gv~v~~~~~v~~i~~~~~~~~-v~~~~~----------~g-~~~~~~D~vi~a~G~~ 279 (476)
T 3lad_A 222 QVAKEAQKILT-KQGLKILLGARVTGTEVKNKQVT-VKFVDA----------EG-EKSQAFDKLIVAVGRR 279 (476)
T ss_dssp HHHHHHHHHHH-HTTEEEEETCEEEEEEECSSCEE-EEEESS----------SE-EEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHH-hCCCEEEECCEEEEEEEcCCEEE-EEEEeC----------CC-cEEEECCEEEEeeCCc
Confidence 34445555554 67999999999999987766543 333210 01 2579999999999944
No 225
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.48 E-value=7.5e-07 Score=85.22 Aligned_cols=99 Identities=12% Similarity=0.093 Sum_probs=71.3
Q ss_pred ccEEEECCChHHHHHHHHhhcC--CCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEec
Q 020815 91 TDVVVVGAGSAGLSCAYELSKN--PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKH 168 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~--~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~ 168 (321)
-.++|||+|..|+.+|..|++. +|.+|+|+|+.+.+... +
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~---------------------------~----------- 229 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRG---------------------------F----------- 229 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTT---------------------------S-----------
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccc---------------------------c-----------
Confidence 4899999999999999999874 27999999998532110 0
Q ss_pred HHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 169 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 169 ~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
...+.+.+.+.+. +.|++++.+++|+++..+++....|.+.+ +.++.+|.||+|+|...
T Consensus 230 d~~~~~~l~~~l~-~~GV~i~~~~~v~~i~~~~~~~~~v~~~~--------------G~~i~~D~vv~a~G~~p 288 (490)
T 1fec_A 230 DSELRKQLTEQLR-ANGINVRTHENPAKVTKNADGTRHVVFES--------------GAEADYDVVMLAIGRVP 288 (490)
T ss_dssp CHHHHHHHHHHHH-HTTEEEEETCCEEEEEECTTSCEEEEETT--------------SCEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHH-hCCCEEEeCCEEEEEEEcCCCEEEEEECC--------------CcEEEcCEEEEccCCCc
Confidence 0234445555555 57999999999999987654333444421 24799999999999543
No 226
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.48 E-value=2.8e-07 Score=86.95 Aligned_cols=112 Identities=16% Similarity=0.138 Sum_probs=66.1
Q ss_pred cEEEECCChHHHHHHHHhhcCCC--CeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecH
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPN--IQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G--~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 169 (321)
.|||||||++|++||..|++. | .+|+|||+++..... ..++. .++.. ...+..... ....
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~-g~~~~V~lie~~~~~~~~---~~~l~----------~~~~~--~~~~~~~~~--~~~~ 63 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL-DKESDIIIFEKDRDMSFA---NCALP----------YVIGE--VVEDRRYAL--AYTP 63 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-CSSSCEEEEESSSCSSBC---GGGHH----------HHHTT--SSCCGGGTB--CCCH
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCCCcEEEEeCCCCCCCC---cchhH----------HHHcC--Cccchhhhh--hcCH
Confidence 599999999999999999986 5 679999997643221 11111 01110 000000000 0111
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
.. ++ ++.+++++.+++|+.+..+...+..... ..++..++.+|++|+|||..
T Consensus 64 ~~----~~----~~~~i~~~~~~~V~~id~~~~~~~~~~~------------~~~~~~~~~yd~lVIATGs~ 115 (437)
T 4eqs_A 64 EK----FY----DRKQITVKTYHEVIAINDERQTVSVLNR------------KTNEQFEESYDKLILSPGAS 115 (437)
T ss_dssp HH----HH----HHHCCEEEETEEEEEEETTTTEEEEEET------------TTTEEEEEECSEEEECCCEE
T ss_pred HH----HH----HhcCCEEEeCCeEEEEEccCcEEEEEec------------cCCceEEEEcCEEEECCCCc
Confidence 11 11 2458999999999888655554332111 11234678999999999964
No 227
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.47 E-value=3.3e-07 Score=85.59 Aligned_cols=105 Identities=20% Similarity=0.197 Sum_probs=66.8
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC--eEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEe
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIK 167 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~--~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~ 167 (321)
.+||+|||||++|+++|+.|++. |. +|+|||+....+.. . +...+ .++... . .+. .. .
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-g~~~~V~lie~~~~~~~~---~-~~~~~--------~~~~~~-~-~~~---~~--~ 66 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQA-GYQGLITVVGDEAERPYD---R-PPLSK--------DFMAHG-D-AEK---IR--L 66 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHH-TCCSCEEEEESSCSCCBC---S-GGGGT--------HHHHHC-C-GGG---SB--C
T ss_pred CCcEEEECChHHHHHHHHHHHcc-CCCCeEEEEECCCCCccc---C-CCCCH--------HHhCCC-c-hhh---hh--H
Confidence 58999999999999999999998 76 59999998643211 0 00000 111111 0 110 00 0
Q ss_pred cHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 168 HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 168 ~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
+ .+ ++.+++++.+++|+.+..++.. |.+. ++.++.+|++|+|||...
T Consensus 67 ------~----~~-~~~~v~~~~~~~v~~i~~~~~~---v~~~--------------~g~~~~~d~lviAtG~~~ 113 (408)
T 2gqw_A 67 ------D----CK-RAPEVEWLLGVTAQSFDPQAHT---VALS--------------DGRTLPYGTLVLATGAAP 113 (408)
T ss_dssp ------C----CT-TSCSCEEEETCCEEEEETTTTE---EEET--------------TSCEEECSEEEECCCEEE
T ss_pred ------H----HH-HHCCCEEEcCCEEEEEECCCCE---EEEC--------------CCCEEECCEEEECCCCCC
Confidence 0 12 3679999999889888654443 2232 125799999999999643
No 228
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.47 E-value=1.9e-06 Score=82.35 Aligned_cols=101 Identities=15% Similarity=0.173 Sum_probs=69.7
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.++|||+|..|+..|..|++. |.+|+++++...... + ..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~l~~----------------------------~-----------d~ 225 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGI-GLDTTVMMRSIPLRG----------------------------F-----------DQ 225 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCSSTT----------------------------S-----------CH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCceEEEEcCccccc----------------------------C-----------CH
Confidence 3799999999999999999999 999999998531100 0 02
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
++.+.+.+.+. +.|++++.++.+.++...++....+...+ .. +++..++.+|.||+|+|..
T Consensus 226 ~~~~~l~~~l~-~~gv~~~~~~~v~~i~~~~~~~~~v~~~~------~~---~g~~~~~~~D~vi~a~G~~ 286 (488)
T 3dgz_A 226 QMSSLVTEHME-SHGTQFLKGCVPSHIKKLPTNQLQVTWED------HA---SGKEDTGTFDTVLWAIGRV 286 (488)
T ss_dssp HHHHHHHHHHH-HTTCEEEETEEEEEEEECTTSCEEEEEEE------TT---TTEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHH-HCCCEEEeCCEEEEEEEcCCCcEEEEEEe------CC---CCeeEEEECCEEEEcccCC
Confidence 34445555554 67999999999999977443322333321 00 1122468999999999944
No 229
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.47 E-value=9.2e-07 Score=84.72 Aligned_cols=99 Identities=12% Similarity=0.166 Sum_probs=70.9
Q ss_pred ccEEEECCChHHHHHHHHhhcC-C-CCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEec
Q 020815 91 TDVVVVGAGSAGLSCAYELSKN-P-NIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKH 168 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~-~-G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~ 168 (321)
-.++|||+|..|+.+|..|++. + |.+|+|+|+.+.+-.. +
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~---------------------------~----------- 233 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRG---------------------------F----------- 233 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTT---------------------------S-----------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccc---------------------------c-----------
Confidence 4899999999999999999874 1 7999999997532110 0
Q ss_pred HHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 169 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 169 ~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
...+...+.+.+. +.|++++.+++|+++..+++....|.+.+ +.++.+|.||+|+|...
T Consensus 234 d~~~~~~l~~~l~-~~GV~i~~~~~v~~i~~~~~~~~~v~~~~--------------G~~i~~D~vv~a~G~~p 292 (495)
T 2wpf_A 234 DETIREEVTKQLT-ANGIEIMTNENPAKVSLNTDGSKHVTFES--------------GKTLDVDVVMMAIGRIP 292 (495)
T ss_dssp CHHHHHHHHHHHH-HTTCEEEESCCEEEEEECTTSCEEEEETT--------------SCEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHH-hCCCEEEeCCEEEEEEEcCCceEEEEECC--------------CcEEEcCEEEECCCCcc
Confidence 0233445555554 67999999999999987654333444421 25799999999999543
No 230
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.46 E-value=4.8e-07 Score=84.30 Aligned_cols=106 Identities=19% Similarity=0.218 Sum_probs=65.2
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC--eEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEec
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKH 168 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~ 168 (321)
.||+|||||++|+++|+.|++. |. +|+|||+.+...... ..+....+.. .... ..+. ..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~-g~~~~V~lie~~~~~~y~~---~~l~~~~l~~----------~~~~---~~~~--~~ 62 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQA-KYPGRIALINDEKHLPYQR---PPLSKAYLKS----------GGDP---NSLM--FR 62 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCSCEEEECCSSSSSBCS---GGGGTGGGGS----------CCCT---TSSB--SS
T ss_pred CCEEEEcChHHHHHHHHHHHhh-CcCCCEEEEeCCCCCCCCC---ccCCHHHHCC----------CCCH---HHcc--CC
Confidence 4899999999999999999998 87 899999986433210 0000000000 0000 0000 01
Q ss_pred HHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 169 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 169 ~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
..+.+. +.+++++. ++++.+..++.. +.+. ++.++.+|.+|+|||..
T Consensus 63 -------~~~~~~-~~~i~~~~-~~v~~id~~~~~---v~~~--------------~g~~~~~d~lvlAtG~~ 109 (404)
T 3fg2_P 63 -------PEKFFQ-DQAIELIS-DRMVSIDREGRK---LLLA--------------SGTAIEYGHLVLATGAR 109 (404)
T ss_dssp -------CHHHHH-HTTEEEEC-CCEEEEETTTTE---EEES--------------SSCEEECSEEEECCCEE
T ss_pred -------CHHHHH-hCCCEEEE-EEEEEEECCCCE---EEEC--------------CCCEEECCEEEEeeCCC
Confidence 011122 46899999 899888665553 2332 22678999999999964
No 231
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.46 E-value=8e-07 Score=80.39 Aligned_cols=98 Identities=12% Similarity=0.207 Sum_probs=69.4
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecH
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 169 (321)
.-.|+|||+|..|+..|..|++. +.+|+++++.+.+.. .
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~-g~~V~l~~~~~~~~~-----------------------------~----------- 193 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRF-ARSVTLVHRRDEFRA-----------------------------S----------- 193 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTT-CSEEEEECSSSSCSS-----------------------------C-----------
T ss_pred CCEEEEECCCHHHHHHHHHHHHh-CCeEEEEEcCCcCCc-----------------------------c-----------
Confidence 35899999999999999999999 999999998753210 0
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
..+.+++.++.|++++.+++++++..++ ++.++.+... .+++..++.+|.||+|+|...
T Consensus 194 ----~~~~~~~~~~~gV~v~~~~~v~~i~~~~-~~~~v~~~~~---------~~g~~~~i~~D~vi~a~G~~p 252 (335)
T 2a87_A 194 ----KIMLDRARNNDKIRFLTNHTVVAVDGDT-TVTGLRVRDT---------NTGAETTLPVTGVFVAIGHEP 252 (335)
T ss_dssp ----TTHHHHHHHCTTEEEECSEEEEEEECSS-SCCEEEEEEE---------TTSCCEEECCSCEEECSCEEE
T ss_pred ----HHHHHHHhccCCcEEEeCceeEEEecCC-cEeEEEEEEc---------CCCceEEeecCEEEEccCCcc
Confidence 0112233346899999999999987544 3444554320 112346899999999999443
No 232
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.46 E-value=3.2e-07 Score=86.49 Aligned_cols=134 Identities=17% Similarity=0.203 Sum_probs=84.2
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.++|||||..|+..|..+++. |.+|+|+|+.+.+... ++ .
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~ll~~---------------------------~d-----------~ 188 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYER-GLHPTLIHRSDKINKL---------------------------MD-----------A 188 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSCCSTT---------------------------SC-----------G
T ss_pred cEEEEECCccchhhhHHHHHhc-CCcceeeeeecccccc---------------------------cc-----------c
Confidence 4799999999999999999999 9999999997643110 00 1
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCCCcchhhh
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK 250 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~~~~~~~~ 250 (321)
++.+.+.+.+. +.|++++.+++++++ +.+. +... ++.++.+|.||+|+|..... .
T Consensus 189 ~~~~~~~~~l~-~~gV~i~~~~~v~~~--~~~~---v~~~--------------~g~~~~~D~vl~a~G~~Pn~-----~ 243 (437)
T 4eqs_A 189 DMNQPILDELD-KREIPYRLNEEINAI--NGNE---ITFK--------------SGKVEHYDMIIEGVGTHPNS-----K 243 (437)
T ss_dssp GGGHHHHHHHH-HTTCCEEESCCEEEE--ETTE---EEET--------------TSCEEECSEEEECCCEEESC-----G
T ss_pred hhHHHHHHHhh-ccceEEEeccEEEEe--cCCe---eeec--------------CCeEEeeeeEEEEeceecCc-----H
Confidence 12233344444 679999999998876 3443 3332 23689999999999944321 1
Q ss_pred hhhhcCCcccccCCceeecccccchhhcccccccccccccccchhhc
Q 020815 251 RLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEI 297 (321)
Q Consensus 251 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~g~~~~~~ 297 (321)
.+...+.. +.....+..+ .+.+...|++|++||++...
T Consensus 244 ~~~~~gl~--~~~~G~I~vd-------~~~~Ts~p~IyA~GDva~~~ 281 (437)
T 4eqs_A 244 FIESSNIK--LDRKGFIPVN-------DKFETNVPNIYAIGDIATSH 281 (437)
T ss_dssp GGTTSSCC--CCTTSCEECC-------TTCBCSSTTEEECGGGEEEE
T ss_pred HHHhhhhh--hccCCcEecC-------CCccCCCCCEEEEEEccCcc
Confidence 12222220 0011112222 23345679999999987543
No 233
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.45 E-value=1.6e-06 Score=83.53 Aligned_cols=97 Identities=16% Similarity=0.211 Sum_probs=73.1
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.|+|||+|..|+.+|..|++. +.+|+++++.+.+.. .
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~-g~~Vtlv~~~~~l~~---------------------------------------~-- 393 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGI-VEHVTLLEFAPEMKA---------------------------------------D-- 393 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH-BSEEEEECSSSSCCS---------------------------------------C--
T ss_pred CeEEEECCCHHHHHHHHHHHhh-CCEEEEEEeCcccCc---------------------------------------C--
Confidence 4899999999999999999998 999999998753210 0
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
..+.+++.+..|++++.++.++++..+++++.++...+. .+|+..++.+|.||+|+|..
T Consensus 394 ---~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~---------~~g~~~~i~~D~vi~a~G~~ 452 (521)
T 1hyu_A 394 ---QVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDR---------VSGDIHSVALAGIFVQIGLL 452 (521)
T ss_dssp ---HHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEET---------TTCCEEEEECSEEEECCCEE
T ss_pred ---HHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeC---------CCCceEEEEcCEEEECcCCC
Confidence 123444443369999999999999877777877776431 12244689999999999944
No 234
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.45 E-value=3e-07 Score=85.95 Aligned_cols=106 Identities=18% Similarity=0.244 Sum_probs=66.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCe--EEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEec
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQ--IAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKH 168 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~--V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~ 168 (321)
.||+|||||++|+++|..|++. |.+ |+|||+.+..+... ..+.. .++. ...... .+ ..
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~-g~~~~V~li~~~~~~~y~~---~~l~~---------~~~~-g~~~~~---~~---~~ 62 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAE-GFEGRISLIGDEPHLPYDR---PSLSK---------AVLD-GSLERP---PI---LA 62 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCSEEEEEECSSSSSBCS---GGGGT---------HHHH-TSSSSC---CB---SS
T ss_pred CCEEEEcccHHHHHHHHHHHcc-CcCCeEEEEECCCCCCcCC---ccccH---------HHhC-CCCCHH---Hh---cC
Confidence 4899999999999999999998 776 99999986543210 00000 0111 011110 11 11
Q ss_pred HHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 169 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 169 ~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
.. +.+. +.+++++.+++|+.+..++.. |.+. ++.++.+|.+|+|||..
T Consensus 63 ~~-------~~~~-~~~i~~~~~~~v~~id~~~~~---v~~~--------------~g~~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 63 EA-------DWYG-EARIDMLTGPEVTALDVQTRT---ISLD--------------DGTTLSADAIVIATGSR 110 (410)
T ss_dssp CT-------THHH-HTTCEEEESCCEEEEETTTTE---EEET--------------TSCEEECSEEEECCCEE
T ss_pred CH-------HHHH-HCCCEEEeCCEEEEEECCCCE---EEEC--------------CCCEEECCEEEEccCCc
Confidence 01 1111 468999999999988655543 2232 22579999999999964
No 235
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.44 E-value=2.4e-06 Score=81.38 Aligned_cols=103 Identities=13% Similarity=0.105 Sum_probs=71.7
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.++|||+|..|+.+|..|++. |.+|+|+++.+.+... ...
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~~--------------------------------------~d~ 228 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSAL-GSKTSLMIRHDKVLRS--------------------------------------FDS 228 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSCTT--------------------------------------SCH
T ss_pred ccEEEECCCHHHHHHHHHHHHc-CCeEEEEEeCCccccc--------------------------------------cCH
Confidence 4799999999999999999999 9999999987532110 012
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCE-EEEEEEeecceecccCCCCCCC--ceEEEcCeEEEcCCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGR-VGGVVTNWALVSMNHDTQSCMD--PNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~-v~gv~~~~~~~~~~~~~~~~g~--~~~i~a~~VI~AtG~~~ 242 (321)
.+.+.+.+.+. +.|++++.++.++++..+++. ...+...+ .. .++ +.++.+|.||+|+|...
T Consensus 229 ~~~~~~~~~l~-~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~------~~---~g~~~g~~~~~D~vi~a~G~~p 293 (478)
T 3dk9_A 229 MISTNCTEELE-NAGVEVLKFSQVKEVKKTLSGLEVSMVTAV------PG---RLPVMTMIPDVDCLLWAIGRVP 293 (478)
T ss_dssp HHHHHHHHHHH-HTTCEEETTEEEEEEEECSSSEEEEEEECC------TT---SCCEEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHH-HCCCEEEeCCEEEEEEEcCCCcEEEEEEcc------CC---CCcccceEEEcCEEEEeecccc
Confidence 33444455554 679999999999999875443 23344321 00 012 26799999999999443
No 236
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.44 E-value=9.2e-07 Score=81.40 Aligned_cols=129 Identities=19% Similarity=0.216 Sum_probs=85.3
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-+++|||+|..|+.+|..|++. |.+|+|+|+.+.+.. + ..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~----------------------------~-----------~~ 183 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEA-GYHVKLIHRGAMFLG----------------------------L-----------DE 183 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHT-TCEEEEECSSSCCTT----------------------------C-----------CH
T ss_pred CcEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCCeecc----------------------------C-----------CH
Confidence 4799999999999999999999 999999999764211 0 02
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCCCcchhhh
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK 250 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~~~~~~~~ 250 (321)
.+.+.+.+.+. +.|++++.+++++++. .+ ++.+.+ +. +.+|.||+|+|..... .
T Consensus 184 ~~~~~l~~~l~-~~gV~i~~~~~v~~i~--~~---~v~~~~--------------g~-i~~D~vi~a~G~~p~~-----~ 237 (367)
T 1xhc_A 184 ELSNMIKDMLE-ETGVKFFLNSELLEAN--EE---GVLTNS--------------GF-IEGKVKICAIGIVPNV-----D 237 (367)
T ss_dssp HHHHHHHHHHH-HTTEEEECSCCEEEEC--SS---EEEETT--------------EE-EECSCEEEECCEEECC-----H
T ss_pred HHHHHHHHHHH-HCCCEEEcCCEEEEEE--ee---EEEECC--------------CE-EEcCEEEECcCCCcCH-----H
Confidence 33344455554 5799999999999885 22 344421 24 9999999999954432 1
Q ss_pred hhhhcCCcccccCCceeecccccchhhcccccccccccccccchhh
Q 020815 251 RLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAE 296 (321)
Q Consensus 251 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~g~~~~~ 296 (321)
.+.+.++.. ..++.++. +.+...|++|+.|+++..
T Consensus 238 ll~~~gl~~----~~gi~Vd~-------~~~t~~~~IyA~GD~a~~ 272 (367)
T 1xhc_A 238 LARRSGIHT----GRGILIDD-------NFRTSAKDVYAIGDCAEY 272 (367)
T ss_dssp HHHHTTCCB----SSSEECCT-------TSBCSSTTEEECGGGEEB
T ss_pred HHHhCCCCC----CCCEEECC-------CcccCCCCEEEeEeeeec
Confidence 233344311 12233332 123357899999998643
No 237
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.44 E-value=2.6e-07 Score=86.87 Aligned_cols=104 Identities=26% Similarity=0.392 Sum_probs=64.8
Q ss_pred ccEEEECCChHHHHHHHHhhc--CCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEec
Q 020815 91 TDVVVVGAGSAGLSCAYELSK--NPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKH 168 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~--~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~ 168 (321)
.||+|||||++|+++|+.|++ . |.+|+|||+++..+... ...++. .+.. .. ......
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~-g~~Vtlie~~~~~~~~~---------------~~~~~~-~g~~-~~-~~~~~~-- 61 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMP-DLKITLISDRPYFGFTP---------------AFPHLA-MGWR-KF-EDISVP-- 61 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCT-TCEEEEECSSSEEECGG---------------GHHHHH-HTCS-CG-GGSEEE--
T ss_pred CCEEEECccHHHHHHHHHHHcCCC-CCeEEEECCCCCCCcCC---------------Ccchhc-cCcc-CH-HHHHHH--
Confidence 599999999999999999999 7 89999999986433210 000111 1110 00 011110
Q ss_pred HHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 169 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 169 ~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
+.+ ..++.|++++.+ +++.+..++.. |.+. +..++.+|++|+|+|..
T Consensus 62 -------~~~-~~~~~gv~~~~~-~v~~id~~~~~---v~~~--------------~g~~i~~d~liiAtG~~ 108 (430)
T 3h28_A 62 -------LAP-LLPKFNIEFINE-KAESIDPDANT---VTTQ--------------SGKKIEYDYLVIATGPK 108 (430)
T ss_dssp -------STT-TGGGGTEEEECS-CEEEEETTTTE---EEET--------------TCCEEECSEEEECCCCE
T ss_pred -------HHH-HHHhcCCEEEEE-EEEEEECCCCE---EEEC--------------CCcEEECCEEEEcCCcc
Confidence 111 122468999875 88887655442 2232 12579999999999965
No 238
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.44 E-value=1.4e-06 Score=84.24 Aligned_cols=96 Identities=18% Similarity=0.233 Sum_probs=71.4
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.++|||||..|+..|..+++. |.+|+|+++.....+ + ..
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~l-G~~VTii~~~~~L~~----------------------------~-----------D~ 263 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSL-GYDVTVAVRSIVLRG----------------------------F-----------DQ 263 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-TCCEEEEESSCSSTT----------------------------S-----------CH
T ss_pred ceEEEECCCHHHHHHHHHHHhc-CCeEEEecccccccc----------------------------c-----------ch
Confidence 3799999999999999999999 999999987532110 0 13
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
++...+.+.+. +.|++++.++.+..+...++.+. |... +..++.+|.|++|+|...
T Consensus 264 ei~~~l~~~l~-~~gi~~~~~~~v~~~~~~~~~~~-v~~~--------------~~~~~~~D~vLvAvGR~P 319 (542)
T 4b1b_A 264 QCAVKVKLYME-EQGVMFKNGILPKKLTKMDDKIL-VEFS--------------DKTSELYDTVLYAIGRKG 319 (542)
T ss_dssp HHHHHHHHHHH-HTTCEEEETCCEEEEEEETTEEE-EEET--------------TSCEEEESEEEECSCEEE
T ss_pred hHHHHHHHHHH-hhcceeecceEEEEEEecCCeEE-EEEc--------------CCCeEEEEEEEEcccccC
Confidence 34455555554 67999999999999998887544 3332 235678999999999443
No 239
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.42 E-value=1.9e-07 Score=87.39 Aligned_cols=40 Identities=30% Similarity=0.576 Sum_probs=37.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCC-CeEEEEeccCCCCCcc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPN-IQIAIIEQSVSPGGGA 130 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G-~~V~liEk~~~~gg~~ 130 (321)
.+||+|||||++|++||+.|++. | .+|+|+|+++.+||.+
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~-g~~~v~v~E~~~~~GG~~ 46 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQA-GFHDYTILERTDHVGGKC 46 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHT-TCCCEEEECSSSCSSTTC
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEECCCCCCCcc
Confidence 57999999999999999999999 9 8999999999888764
No 240
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.41 E-value=1.9e-06 Score=77.28 Aligned_cols=134 Identities=15% Similarity=0.241 Sum_probs=87.2
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.++|||+|..|+.+|..|++. +.+|+++++.+.+... .
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~-~~~v~~~~~~~~~~~~----------------------------------------~ 193 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPI-AKEVSIIHRRDKFRAH----------------------------------------E 193 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTT-BSEEEEECSSSSCSSC----------------------------------------H
T ss_pred CEEEEECCCHhHHHHHHHHHhh-CCeEEEEEecCcCCcc----------------------------------------H
Confidence 4799999999999999999999 9999999987532100 0
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCCCcchhhh
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK 250 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~~~~~~~~ 250 (321)
.. ++++. +.|++++.++.+.++..+++ +.++.+.+. .+++..++.+|.||+|+|......
T Consensus 194 ~~----~~~l~-~~gv~~~~~~~v~~i~~~~~-~~~v~~~~~---------~~g~~~~~~~D~vv~a~G~~p~~~----- 253 (332)
T 3lzw_A 194 HS----VENLH-ASKVNVLTPFVPAELIGEDK-IEQLVLEEV---------KGDRKEILEIDDLIVNYGFVSSLG----- 253 (332)
T ss_dssp HH----HHHHH-HSSCEEETTEEEEEEECSSS-CCEEEEEET---------TSCCEEEEECSEEEECCCEECCCG-----
T ss_pred HH----HHHHh-cCCeEEEeCceeeEEecCCc-eEEEEEEec---------CCCceEEEECCEEEEeeccCCCch-----
Confidence 00 12233 57999999999999876554 555655431 122457899999999999544321
Q ss_pred hhhhcCCcccccCCceeecccccchhhcccccccccccccccchh
Q 020815 251 RLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVA 295 (321)
Q Consensus 251 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~g~~~~ 295 (321)
.+...+.. . ....+..+. +.+...|++|++|+++.
T Consensus 254 ~~~~~~~~--~-~~g~i~vd~-------~~~t~~~~vya~GD~~~ 288 (332)
T 3lzw_A 254 PIKNWGLD--I-EKNSIVVKS-------TMETNIEGFFAAGDICT 288 (332)
T ss_dssp GGGGSSCC--E-ETTEEECCT-------TSBCSSTTEEECGGGEE
T ss_pred HHhhcCcc--c-cCCeEEeCC-------CCceecCCEEEccceec
Confidence 23333321 1 112222222 22345799999999874
No 241
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.41 E-value=1.6e-07 Score=87.54 Aligned_cols=42 Identities=29% Similarity=0.496 Sum_probs=38.1
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAW 131 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~ 131 (321)
++||+|||||++|+++|+.|++.+|.+|+|+|+++.+||.+.
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~ 48 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAY 48 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGC
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeee
Confidence 689999999999999999999854799999999999988764
No 242
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.40 E-value=1.3e-07 Score=90.99 Aligned_cols=40 Identities=33% Similarity=0.526 Sum_probs=37.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCC-CeEEEEeccCCCCCcc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPN-IQIAIIEQSVSPGGGA 130 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G-~~V~liEk~~~~gg~~ 130 (321)
.+||+|||||++||+||+.|++. | .+|+|+|+++.+||.+
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~-G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQN-GIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHT-TCCSEEEECSSSSSBTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHhc-CCCCEEEEeCCCCCCCce
Confidence 57999999999999999999999 9 9999999999998865
No 243
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.40 E-value=1e-07 Score=99.12 Aligned_cols=39 Identities=33% Similarity=0.546 Sum_probs=35.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeccCCCCCc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSVSPGGG 129 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~~~~gg~ 129 (321)
.+||+|||||++|+++|+.|++. |+ +|+|+|+...+||.
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~-G~~~Vtv~E~~~~~GG~ 226 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARL-GYSDITIFEKQEYVGGL 226 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHT-TCCCEEEEESSSSCSTH
T ss_pred CCEEEEECccHHHHHHHHHHHhc-CCCcEEEEeCCCCCCcc
Confidence 57999999999999999999999 98 79999998777764
No 244
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.38 E-value=9.2e-08 Score=88.76 Aligned_cols=123 Identities=14% Similarity=0.184 Sum_probs=81.3
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-+|+|||+|..|+.+|..|++. |.+|+|+|+.+.+....+ ..
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~-g~~Vtvv~~~~~~l~~~~-------------------------------------~~ 188 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDS-GTPASIGIILEYPLERQL-------------------------------------DR 188 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH-TCCEEEECSSSSSCTTTS-------------------------------------CH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEEcCCccchhhc-------------------------------------CH
Confidence 4799999999999999999999 999999999864321100 02
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCCCcchhhh
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK 250 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~~~~~~~~ 250 (321)
.+...+.+.+. +.|++++.++.++++ + .++.+|.||+|+|..... .
T Consensus 189 ~~~~~~~~~l~-~~gV~~~~~~~v~~i----g------------------------~~~~~D~vv~a~G~~p~~-----~ 234 (385)
T 3klj_A 189 DGGLFLKDKLD-RLGIKIYTNSNFEEM----G------------------------DLIRSSCVITAVGVKPNL-----D 234 (385)
T ss_dssp HHHHHHHHHHH-TTTCEEECSCCGGGC----H------------------------HHHHHSEEEECCCEEECC-----G
T ss_pred HHHHHHHHHHH-hCCCEEEeCCEEEEc----C------------------------eEEecCeEEECcCcccCh-----h
Confidence 23334444444 789999999887765 1 467899999999944322 2
Q ss_pred hhhhcCCcccccCCceeecccccchhhcccccccccccccccchhh
Q 020815 251 RLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAE 296 (321)
Q Consensus 251 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~g~~~~~ 296 (321)
.+.+.++.. ..++.++. ..+...|++|++|+++..
T Consensus 235 ~~~~~gl~~----~~gi~vd~-------~~~t~~~~IyA~GD~a~~ 269 (385)
T 3klj_A 235 FIKDTEIAS----KRGILVND-------HMETSIKDIYACGDVAEF 269 (385)
T ss_dssp GGTTSCCCB----SSSEEECT-------TCBCSSTTEEECGGGEEE
T ss_pred hhhhcCCCc----CCCEEECC-------CcccCCCCEEEEEeeEec
Confidence 233333211 12233322 223467999999998754
No 245
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.37 E-value=9e-06 Score=76.81 Aligned_cols=136 Identities=14% Similarity=0.169 Sum_probs=76.4
Q ss_pred cccEEEECCChHHHHHHHHhhcC-CCCeEEEEeccCCCCCccccCcccchhhhccchHHH------------HHHHcCCC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHI------------FLDELGID 156 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~-~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~------------~l~~~g~~ 156 (321)
...|+|||+|..|+.+|..|++. ++.+|.++++....--. ....+...+......+ .+....-.
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~---~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~ 303 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPA---DDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNT 303 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBC---CCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGG
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCc---cCCccchhccChhHHHHHhcCCHHHHHHHHHHhhcc
Confidence 45899999999999999999984 47899999997643110 0000000001111111 11111100
Q ss_pred cccCCCeEEEec--HHHHHHH-HHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCe
Q 020815 157 YDEQDNYVVIKH--AALFTST-IMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKV 233 (321)
Q Consensus 157 ~~~~~~~~~~~~--~~~~~~~-l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~ 233 (321)
.|..... ...+... +.+++....+++++.++.|+++..+++.+. +.+.+ . .+|+..++.+|.
T Consensus 304 -----~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~-v~~~~------~---~~g~~~~~~~D~ 368 (463)
T 3s5w_A 304 -----NYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGIE-LALRD------A---GSGELSVETYDA 368 (463)
T ss_dssp -----TSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEEE-EEEEE------T---TTCCEEEEEESE
T ss_pred -----CCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEEE-EEEEE------c---CCCCeEEEECCE
Confidence 0111111 1122222 233444447999999999999988776532 33321 1 123446799999
Q ss_pred EEEcCCCCCC
Q 020815 234 VVSSCGHDGP 243 (321)
Q Consensus 234 VI~AtG~~~~ 243 (321)
||+|+|....
T Consensus 369 Vv~AtG~~p~ 378 (463)
T 3s5w_A 369 VILATGYERQ 378 (463)
T ss_dssp EEECCCEECC
T ss_pred EEEeeCCCCC
Confidence 9999996544
No 246
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.37 E-value=6.7e-08 Score=91.81 Aligned_cols=38 Identities=34% Similarity=0.565 Sum_probs=34.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCC--CeEEEEeccCCCCC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPN--IQIAIIEQSVSPGG 128 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G--~~V~liEk~~~~gg 128 (321)
.+||+|||||++|+.+|..|++. | .+|+|||+.+.++|
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~-g~~~~V~vie~~~~~gg 45 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKH-HSRAHVDIYEKQLVPFG 45 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-CSSCEEEEECSSSSSCT
T ss_pred CceEEEECcCHHHHHHHHHHHhc-CCCCCEEEEeCCCcCCc
Confidence 47999999999999999999997 7 99999999877654
No 247
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.36 E-value=3.8e-06 Score=79.72 Aligned_cols=138 Identities=17% Similarity=0.194 Sum_probs=85.8
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.++|||+|..|+.+|..|++. |.+|+|+++.+.+.... ...
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~~-------------------------------------~d~ 214 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLM-GVQTHIIEMLDRALITL-------------------------------------EDQ 214 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSCTTS-------------------------------------CCH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCEEEEEEeCCcCCCCC-------------------------------------CCH
Confidence 4799999999999999999999 99999999975421100 002
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEEC-CEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCCCcchhh
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGV 249 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~-~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~~~~~~~ 249 (321)
++.+.+.+.+ + ++++.++.++++..++ +.+. +.... .+|+..++.+|.||+|+|...... +
T Consensus 215 ~~~~~l~~~l--~--v~i~~~~~v~~i~~~~~~~v~-v~~~~----------~~G~~~~i~~D~vi~a~G~~p~~~---l 276 (466)
T 3l8k_A 215 DIVNTLLSIL--K--LNIKFNSPVTEVKKIKDDEYE-VIYST----------KDGSKKSIFTNSVVLAAGRRPVIP---E 276 (466)
T ss_dssp HHHHHHHHHH--C--CCEECSCCEEEEEEEETTEEE-EEECC----------TTSCCEEEEESCEEECCCEEECCC---T
T ss_pred HHHHHHHhcC--E--EEEEECCEEEEEEEcCCCcEE-EEEEe----------cCCceEEEEcCEEEECcCCCcccc---c
Confidence 2333433333 2 9999999999998766 6543 33320 022345899999999999443321 0
Q ss_pred hhhhhcCCcccccCCceeecccccchhhcccccccccccccccchh
Q 020815 250 KRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVA 295 (321)
Q Consensus 250 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~g~~~~ 295 (321)
.+.+.++ .+.. .++.++ ...+...|++|++|+++.
T Consensus 277 -~l~~~gl--~~~~-~Gi~vd-------~~~~t~~~~Iya~GD~~~ 311 (466)
T 3l8k_A 277 -GAREIGL--SISK-TGIVVD-------ETMKTNIPNVFATGDANG 311 (466)
T ss_dssp -TTGGGTC--CBCS-SSBCCC-------TTCBCSSTTEEECGGGTC
T ss_pred -chhhcCc--eeCC-CCEeEC-------CCccCCCCCEEEEEecCC
Confidence 0122222 0111 112222 123346799999999874
No 248
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.36 E-value=1.6e-07 Score=90.06 Aligned_cols=128 Identities=13% Similarity=0.172 Sum_probs=69.0
Q ss_pred cccEEEECCChHHHHHHHHhhcC-CCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHc---CCCcccCCCeEE
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDEL---GIDYDEQDNYVV 165 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~-~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~---g~~~~~~~~~~~ 165 (321)
.+||||||||++|+++|..|.+. ++.+|+|||+.+..+-.. +.+.+.+............ +++.... .. .
T Consensus 11 ~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r----~~lsk~l~~~~~~~~~~~~~~~~~~~~~~-~~-~ 84 (493)
T 1m6i_A 11 HVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMR----PPLSKELWFSDDPNVTKTLRFKQWNGKER-SI-Y 84 (493)
T ss_dssp EEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCS----GGGGTGGGCC--CTHHHHCEEECTTSCEE-ES-B
T ss_pred cCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCC----CCCCHHhhcCCccchhhcccccccccccc-cc-c
Confidence 58999999999999999888652 378999999986543211 1111111111000011111 1110000 00 0
Q ss_pred EecHHHHH--HHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 166 IKHAALFT--STIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 166 ~~~~~~~~--~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
+.....+. ..+. ++ .+.|++++.+++|+.+..++.. |.+. ++.++.+|.+|+|||...
T Consensus 85 ~~~~~~~~~~~~l~-~~-~~~gv~~~~g~~v~~id~~~~~---V~~~--------------~g~~i~yd~lviATGs~p 144 (493)
T 1m6i_A 85 FQPPSFYVSAQDLP-HI-ENGGVAVLTGKKVVQLDVRDNM---VKLN--------------DGSQITYEKCLIATGGTP 144 (493)
T ss_dssp SSCGGGSBCTTTTT-TS-TTCEEEEEETCCEEEEEGGGTE---EEET--------------TSCEEEEEEEEECCCEEE
T ss_pred ccchHhhcchhhhh-hh-hcCCeEEEcCCEEEEEECCCCE---EEEC--------------CCCEEECCEEEECCCCCC
Confidence 00000000 0111 11 2568999999999988665543 2332 125789999999999654
No 249
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.35 E-value=3.5e-07 Score=87.21 Aligned_cols=40 Identities=40% Similarity=0.766 Sum_probs=37.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCcc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA 130 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~ 130 (321)
.+||+|||||++||+||+.|++. |.+|+|+|+.+.+||.+
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~-g~~v~v~E~~~~~GG~~ 50 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKA-GYKVTVLEARTRPGGRV 50 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSCTTC
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCCEEEEeccCCCCCce
Confidence 57999999999999999999999 99999999999998864
No 250
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.34 E-value=3.2e-07 Score=85.27 Aligned_cols=41 Identities=32% Similarity=0.502 Sum_probs=38.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAW 131 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~ 131 (321)
.+||+|||||++|+++|++|++. |.+|+|+|+++.+||.+.
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~-g~~v~v~E~~~~~GG~~~ 69 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASS-GQRVLIVDRRPHIGGNAY 69 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSSGGGC
T ss_pred CCCEEEECccHHHHHHHHHHHHC-CCceEEEeccCCCCCccc
Confidence 68999999999999999999999 999999999988888764
No 251
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.33 E-value=7.4e-07 Score=83.78 Aligned_cols=104 Identities=28% Similarity=0.453 Sum_probs=64.4
Q ss_pred cEEEECCChHHHHHHHHhhcC-CCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 92 DVVVVGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~-~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
.|||||||++|+++|..|++. ++.+|+|||+++... +. +...++-.-....+. ... .
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~---------~~------p~l~~v~~g~~~~~~---i~~--~-- 61 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFG---------FT------PAFPHLAMGWRKFED---ISV--P-- 61 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEE---------CG------GGHHHHHHTCSCGGG---SEE--E--
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCc---------cC------ccHHHHhcCCCCHHH---hhh--c--
Confidence 699999999999999999984 258999999975310 00 001111111111111 110 0
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
++.+.++.|++++.+ +|+.|..++.+| .+. ++.++..|++|+|||..
T Consensus 62 ------~~~~~~~~gv~~i~~-~v~~Id~~~~~V---~~~--------------~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 62 ------LAPLLPKFNIEFINE-KAESIDPDANTV---TTQ--------------SGKKIEYDYLVIATGPK 108 (430)
T ss_dssp ------STTTGGGGTEEEECS-CEEEEETTTTEE---EET--------------TCCEEECSEEEECCCCE
T ss_pred ------HHHHHHHCCcEEEEe-EEEEEECCCCEE---EEC--------------CCCEEECCEEEEeCCCC
Confidence 111223568999887 788887666643 332 23689999999999964
No 252
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.33 E-value=6.5e-06 Score=79.28 Aligned_cols=101 Identities=20% Similarity=0.272 Sum_probs=67.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.++|||+|..|+..|..|++. |.+|+|+++...... + ..
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~-G~~Vtlv~~~~~l~~----------------------------~-----------d~ 250 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGI-GLDVTVMVRSILLRG----------------------------F-----------DQ 250 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCSSTT----------------------------S-----------CH
T ss_pred CeEEEECCcHHHHHHHHHHHHc-CCeEEEEeccccccc----------------------------C-----------CH
Confidence 3699999999999999999999 999999998521100 0 02
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEEC----CEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKG----GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~----~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
++.+.+.+.+. +.||+++.++.++++...+ +.+. +.... .++ ++..++.+|.||+|+|...
T Consensus 251 ~~~~~~~~~l~-~~GV~v~~~~~v~~v~~~~~~~~~~~~-v~~~~------~~g---~~~~~~~~D~vi~a~G~~p 315 (519)
T 3qfa_A 251 DMANKIGEHME-EHGIKFIRQFVPIKVEQIEAGTPGRLR-VVAQS------TNS---EEIIEGEYNTVMLAIGRDA 315 (519)
T ss_dssp HHHHHHHHHHH-HTTCEEEESEEEEEEEEEECCTTCEEE-EEEEE------SSS---SCEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHH-HCCCEEEeCCeEEEEEEccCCCCceEE-EEEEE------CCC---cEEEEEECCEEEEecCCcc
Confidence 34445555554 6799999999888886532 3322 22211 010 0224678999999999443
No 253
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.33 E-value=1.2e-05 Score=71.74 Aligned_cols=135 Identities=16% Similarity=0.201 Sum_probs=82.8
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.|+|||||..|+.+|..|++. |.+|+|+|+.+.+-.. .
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~~~~~----------------------------------------~ 184 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKF-ADKVTIVHRRDELRAQ----------------------------------------R 184 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT-CSEEEEECSSSSCCSC----------------------------------------H
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCEEEEEecccccCcc----------------------------------------h
Confidence 3799999999999999999999 9999999987532110 0
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCCCcchhhh
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK 250 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~~~~~~~~ 250 (321)
. ..++..++.++.+.....+..+...+........... ..++...+.++.|+.+.|......
T Consensus 185 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~d~v~~~~g~~~~~~----- 246 (312)
T 4gcm_A 185 I----LQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTST---------KDGSEETHEADGVFIYIGMKPLTA----- 246 (312)
T ss_dssp H----HHHHHHHCTTEEEECSEEEEEEEEETTEEEEEEEEET---------TTCCEEEEECSEEEECSCEEESCG-----
T ss_pred h----HHHHHHHhcCcceeeecceeeeeccccccccceeeee---------cCCceeEEeeeeEEeecCCCcCch-----
Confidence 0 0112223667888888777777666654443333211 122457899999999999433211
Q ss_pred hhhhcCCcccccCCceeecccccchhhcccccccccccccccch
Q 020815 251 RLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEV 294 (321)
Q Consensus 251 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~g~~~ 294 (321)
.+...+.. .....+.. ..+.+...|++|++||.+
T Consensus 247 ~~~~~g~~---~~~G~I~v-------d~~~~Ts~pgIyA~GDv~ 280 (312)
T 4gcm_A 247 PFKDLGIT---NDVGYIVT-------KDDMTTSVPGIFAAGDVR 280 (312)
T ss_dssp GGGGGTCB---CTTSCBCC-------CTTSBCSSTTEEECSTTB
T ss_pred hHHhccee---cCCCeEee-------CCCCccCCCCEEEEeecC
Confidence 12222210 00011111 123345689999999986
No 254
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.31 E-value=3.2e-07 Score=86.49 Aligned_cols=40 Identities=40% Similarity=0.659 Sum_probs=37.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCcc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA 130 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~ 130 (321)
++||+|||||++|++||+.|++. |++|+|+|++..+||.+
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~GG~~ 44 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKA-GLSVAVIEARDRVGGRT 44 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCTTC
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCcEEEEECCCCCCCce
Confidence 58999999999999999999999 99999999998888765
No 255
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.31 E-value=4.6e-07 Score=83.61 Aligned_cols=41 Identities=29% Similarity=0.466 Sum_probs=38.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEecc-CCCCCccc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS-VSPGGGAW 131 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~-~~~gg~~~ 131 (321)
.+||+|||||++||++|+.|++. |++|+|+|++ ..+||.++
T Consensus 44 ~~~V~IIGAGiaGL~aA~~L~~~-G~~V~VlE~~~~~vGGr~~ 85 (376)
T 2e1m_A 44 PKRILIVGAGIAGLVAGDLLTRA-GHDVTILEANANRVGGRIK 85 (376)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHT-SCEEEEECSCSSCCBTTCC
T ss_pred CceEEEECCCHHHHHHHHHHHHC-CCcEEEEeccccccCCcee
Confidence 58999999999999999999999 9999999999 88988764
No 256
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.31 E-value=3.8e-07 Score=84.03 Aligned_cols=40 Identities=40% Similarity=0.652 Sum_probs=37.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccc
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAW 131 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~ 131 (321)
+||+|||||++|+++|++|++. |.+|+|+|+++.+||.+.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~-g~~v~v~E~~~~~GG~~~ 41 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKL-NKKVLVIEKRNHIGGNAY 41 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGG-TCCEEEECSSSSSSGGGC
T ss_pred CCEEEECcCHHHHHHHHHHHhC-CCcEEEEecCCCCCcceE
Confidence 7999999999999999999999 999999999988988764
No 257
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.25 E-value=4e-06 Score=80.39 Aligned_cols=123 Identities=20% Similarity=0.322 Sum_probs=68.7
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcC-CCcccCCCeEEEec
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELG-IDYDEQDNYVVIKH 168 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g-~~~~~~~~~~~~~~ 168 (321)
+..|||||||.+|+.+|..|.+. +++|+|||+++. ..+..++..-. .| ++... . ...
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~-~~~VtLId~~~~---------~~~~PlL~~va-------~G~l~~~~---i--~~p 99 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTK-KYNVSIISPRSY---------FLFTPLLPSAP-------VGTVDEKS---I--IEP 99 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTT-TCEEEEEESSSE---------EECGGGGGGTT-------TTSSCGGG---G--EEE
T ss_pred CCCEEEECCcHHHHHHHHHhhhC-CCcEEEECCCCC---------cccccchhHHh-------hccccHHH---h--hhh
Confidence 45799999999999999999998 999999999752 11111110000 01 01000 0 001
Q ss_pred HHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceec----ccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 169 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSM----NHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 169 ~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~----~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
+ ..+. ..+..+++++.+ +|++|..+...|.-... .+.... +......++..++..|++|+|+|...
T Consensus 100 ---~-~~~~--~~~~~~v~~~~~-~v~~ID~~~k~V~l~~~-~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~ 169 (502)
T 4g6h_A 100 ---I-VNFA--LKKKGNVTYYEA-EATSINPDRNTVTIKSL-SAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEP 169 (502)
T ss_dssp ---H-HHHH--TTCSSCEEEEEE-EEEEEEGGGTEEEEEEE-EEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEE
T ss_pred ---H-HHHH--HhhcCCeEEEEE-EEEEEEhhhCEEEEeec-ccceeecccccccccccCCceEEeCCEEEEcCCccc
Confidence 1 1111 112467888876 78888766665432111 100000 00111123457899999999999754
No 258
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.23 E-value=8.6e-07 Score=84.71 Aligned_cols=42 Identities=29% Similarity=0.483 Sum_probs=38.0
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCC-CeEEEEeccCCCCCccc
Q 020815 89 ADTDVVVVGAGSAGLSCAYELSKNPN-IQIAIIEQSVSPGGGAW 131 (321)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G-~~V~liEk~~~~gg~~~ 131 (321)
..+||+|||||++|+++|++|++. | .+|+|+|+.+.+||.+.
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~-g~~~v~v~E~~~~~GG~~~ 50 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTEL-GYKNWHLYECNDTPGGLSR 50 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHT-TCCSEEEEESSSSSSGGGC
T ss_pred cCCCEEEECcCHHHHHHHHHHHHc-CCCCEEEEeCCCCCCCeee
Confidence 368999999999999999999999 7 79999999988887653
No 259
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.22 E-value=2.5e-06 Score=79.08 Aligned_cols=103 Identities=18% Similarity=0.184 Sum_probs=62.1
Q ss_pred cEEEECCChHHHHHHHHhhcC-CCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 92 DVVVVGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~-~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
.|||||||++|+++|.+|++. ++.+|+|||+++.... ..... ..+.. -.+.+. .. ..
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~-----~p~~~---------~v~~g-~~~~~~---~~--~~-- 61 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYT-----CYMSN---------EVIGG-DRELAS---LR--VG-- 61 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEEC-----STTHH---------HHHHT-SSCGGG---GE--EC--
T ss_pred EEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCC-----ccCHH---------HHhcC-CCCHHH---Hh--hC--
Confidence 699999999999999999874 2579999999753111 00000 01100 011110 00 01
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
++.+. ..|++++.+ +|+.|..++..+ .+. ++.++..|++|+|+|..
T Consensus 62 ------~~~~~-~~gv~~i~~-~v~~id~~~~~v---~~~--------------~g~~i~yd~LviAtG~~ 107 (401)
T 3vrd_B 62 ------YDGLR-AHGIQVVHD-SALGIDPDKKLV---KTA--------------GGAEFAYDRCVVAPGID 107 (401)
T ss_dssp ------SHHHH-HTTCEEECS-CEEEEETTTTEE---EET--------------TSCEEECSEEEECCCEE
T ss_pred ------HHHHH-HCCCEEEEe-EEEEEEccCcEE---Eec--------------ccceeecceeeeccCCc
Confidence 11222 358999877 788886655533 232 23689999999999953
No 260
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.22 E-value=9.9e-07 Score=84.36 Aligned_cols=40 Identities=33% Similarity=0.628 Sum_probs=37.4
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCcc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA 130 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~ 130 (321)
.+||+|||||++||++|+.|++. |++|+|+|+.+.+||.+
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~GG~~ 52 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIH-GLNVTVFEAEGKAGGKL 52 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-SCEEEEECSSSSSCSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCcEEEEEeCCCCCCce
Confidence 57999999999999999999999 99999999999988754
No 261
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.21 E-value=2.9e-07 Score=87.33 Aligned_cols=40 Identities=23% Similarity=0.370 Sum_probs=34.6
Q ss_pred cccEEEECCChHHHHHHHHhhc-C-C----CCeEEEEeccCCCCCc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSK-N-P----NIQIAIIEQSVSPGGG 129 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~-~-~----G~~V~liEk~~~~gg~ 129 (321)
.+||+|||||++|+.+|..|++ . + +.+|+|||+.+.++|.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~ 48 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGL 48 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTH
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCc
Confidence 4799999999999999999988 4 1 6899999998777653
No 262
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.20 E-value=1.2e-06 Score=81.14 Aligned_cols=41 Identities=29% Similarity=0.543 Sum_probs=37.8
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAW 131 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~ 131 (321)
++||+|||||++|+++|+.|++. |.+|+|+|+++.+||.+.
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~-g~~v~v~E~~~~~GG~~~ 43 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEK-GHQVHIIDQRDHIGGNSY 43 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSSSSGGGC
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCcEEEEEecCCcCCccc
Confidence 47999999999999999999999 999999999988888753
No 263
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.19 E-value=1.4e-06 Score=82.04 Aligned_cols=40 Identities=23% Similarity=0.328 Sum_probs=37.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCcc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA 130 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~ 130 (321)
++||+|||+|++|+++|+.|++. |++|+|+|++..+||.+
T Consensus 6 ~~~v~iiG~G~~gl~~a~~l~~~-g~~v~~~e~~~~~gg~~ 45 (433)
T 1d5t_A 6 EYDVIVLGTGLTECILSGIMSVN-GKKVLHMDRNPYYGGES 45 (433)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCTTS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCcEEEEecCCCccccc
Confidence 68999999999999999999999 99999999998888764
No 264
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.17 E-value=3.4e-05 Score=75.51 Aligned_cols=99 Identities=16% Similarity=0.222 Sum_probs=64.9
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.|+|||||..|+.+|..|++. |.+|+|+++...... + ..
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~l~~----------------------------~-----------d~ 326 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASL-GGDVTVMVRSILLRG----------------------------F-----------DQ 326 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCSSTT----------------------------S-----------CH
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCEEEEEECCcCcCc----------------------------C-----------CH
Confidence 3799999999999999999999 999999998621100 0 01
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEE------C---CEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVK------G---GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~------~---~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
.+...+.+.+. +.|++++.++.+.++... + +++. +.... .+|+...+.+|.||+|+|..
T Consensus 327 ~~~~~~~~~l~-~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~-v~~~~----------~~g~~~~~~~D~vi~a~G~~ 394 (598)
T 2x8g_A 327 QMAEKVGDYME-NHGVKFAKLCVPDEIKQLKVVDTENNKPGLLL-VKGHY----------TDGKKFEEEFETVIFAVGRE 394 (598)
T ss_dssp HHHHHHHHHHH-HTTCEEEETEEEEEEEEEECCBTTTTBCCEEE-EEEEE----------TTSCEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHH-hCCCEEEECCeEEEEEeccccccccCCCceEE-EEEEe----------CCCcEEeccCCEEEEEeCCc
Confidence 23334444444 579999999888887542 2 3322 22110 11222345699999999944
No 265
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.10 E-value=3.7e-05 Score=69.96 Aligned_cols=105 Identities=16% Similarity=0.249 Sum_probs=65.7
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.|+|||+|..|+.+|..|++. |.+|+++++.+..... . ++.... ...
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~-g~~V~lv~~~~~~~~~----------------------~----~d~~~~-----~~~ 214 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKN-GSDIALYTSTTGLNDP----------------------D----ADPSVR-----LSP 214 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECC------------------------------------CTTS-----CCH
T ss_pred CEEEEECCCcCHHHHHHHHHhc-CCeEEEEecCCCCCCC----------------------C----CCCCcc-----CCH
Confidence 4799999999999999999999 9999999997532100 0 000000 012
Q ss_pred HHHHHHHHHHHcCCC-cEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 171 LFTSTIMSKLLARPN-VKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 171 ~~~~~l~~~~~~~~g-v~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
.+.+.+.+.+. +.| ++++.++.+.++..+++.+ .+...+ |+ ....+|.||+|+|...
T Consensus 215 ~~~~~l~~~l~-~~g~v~~~~~~~v~~i~~~~~~~-~v~~~~------------g~-~~~~~d~vi~a~G~~~ 272 (369)
T 3d1c_A 215 YTRQRLGNVIK-QGARIEMNVHYTVKDIDFNNGQY-HISFDS------------GQ-SVHTPHEPILATGFDA 272 (369)
T ss_dssp HHHHHHHHHHH-TTCCEEEECSCCEEEEEEETTEE-EEEESS------------SC-CEEESSCCEECCCBCG
T ss_pred HHHHHHHHHHh-hCCcEEEecCcEEEEEEecCCce-EEEecC------------Ce-EeccCCceEEeeccCC
Confidence 23344444444 676 9999999999987666542 333321 11 2334699999999443
No 266
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.07 E-value=3.6e-05 Score=73.76 Aligned_cols=99 Identities=18% Similarity=0.199 Sum_probs=65.6
Q ss_pred cEEEECCChHHHHHHHHhhcC-------------CCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcc
Q 020815 92 DVVVVGAGSAGLSCAYELSKN-------------PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYD 158 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~-------------~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~ 158 (321)
.++|||||+.|+.+|..|++. ...+|+|||..+.+-..
T Consensus 219 ~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~----------------------------- 269 (502)
T 4g6h_A 219 SIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNM----------------------------- 269 (502)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTT-----------------------------
T ss_pred ceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccC-----------------------------
Confidence 699999999999999988752 03689999998643110
Q ss_pred cCCCeEEEecHHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCC--CceEEEcCeEEE
Q 020815 159 EQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCM--DPNVMEAKVVVS 236 (321)
Q Consensus 159 ~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g--~~~~i~a~~VI~ 236 (321)
....+.+.+.+.+. +.||+++.++.|+++. ++.+...... .+| ...+|.+|.||.
T Consensus 270 ---------~~~~~~~~~~~~L~-~~GV~v~~~~~v~~v~--~~~~~~~~~~-----------~dg~~~~~~i~ad~viw 326 (502)
T 4g6h_A 270 ---------FEKKLSSYAQSHLE-NTSIKVHLRTAVAKVE--EKQLLAKTKH-----------EDGKITEETIPYGTLIW 326 (502)
T ss_dssp ---------SCHHHHHHHHHHHH-HTTCEEETTEEEEEEC--SSEEEEEEEC-----------TTSCEEEEEEECSEEEE
T ss_pred ---------CCHHHHHHHHHHHH-hcceeeecCceEEEEe--CCceEEEEEe-----------cCcccceeeeccCEEEE
Confidence 01234444455554 6799999999999873 4433221111 111 125799999999
Q ss_pred cCCCCC
Q 020815 237 SCGHDG 242 (321)
Q Consensus 237 AtG~~~ 242 (321)
|+|-..
T Consensus 327 a~Gv~~ 332 (502)
T 4g6h_A 327 ATGNKA 332 (502)
T ss_dssp CCCEEC
T ss_pred ccCCcC
Confidence 999544
No 267
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.06 E-value=2.3e-06 Score=81.66 Aligned_cols=40 Identities=48% Similarity=0.741 Sum_probs=37.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCcc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA 130 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~ 130 (321)
.+||+|||||++|+++|+.|++. |.+|+|+|+.+.+||..
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~-g~~v~vlE~~~~~gg~~ 72 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGA-GHQVTVLEASERPGGRV 72 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHH-TCEEEEECSSSSSBTTC
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCeEEEEECCCCCCCce
Confidence 58999999999999999999999 99999999998888764
No 268
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.01 E-value=7.6e-05 Score=70.69 Aligned_cols=58 Identities=16% Similarity=0.165 Sum_probs=37.0
Q ss_pred CCcEEEcCceEEEEEEEC-C-EEEEEEEeecceeccc--CC-C--CCCCceEEEcCeEEEcCCCCCC
Q 020815 184 PNVKLFNAVAAEDLIVKG-G-RVGGVVTNWALVSMNH--DT-Q--SCMDPNVMEAKVVVSSCGHDGP 243 (321)
Q Consensus 184 ~gv~i~~~~~v~~l~~~~-~-~v~gv~~~~~~~~~~~--~~-~--~~g~~~~i~a~~VI~AtG~~~~ 243 (321)
.|+++++++.++++..++ + ++.+|.+.... ++. +. . .+|+..++.+|.||.|+|..+.
T Consensus 270 ~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~--l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~ 334 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTR--LEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSR 334 (460)
T ss_dssp EEEEEECSEEEEEEEECTTSSSEEEEEEEEEE--EESSGGGCEEEEEEEEEEEECSEEEECCCEECC
T ss_pred ceEEEECCCChheEEcCCCCceEEEEEEEEEE--EccccCCCcccCCCceEEEEcCEEEECCCCCCC
Confidence 789999999999987653 5 67777653210 000 00 0 0123368999999999995543
No 269
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.00 E-value=3.9e-06 Score=79.69 Aligned_cols=40 Identities=40% Similarity=0.607 Sum_probs=36.4
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeccCCCCCcc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSVSPGGGA 130 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~~~~gg~~ 130 (321)
.+||+|||||++|+++|+.|++. |. +|+|+|++..+||.+
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~-g~~~v~~~e~~~~~gg~~ 44 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEA-GITDLLILEATDHIGGRM 44 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHT-TCCCEEEECSSSSSBTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhc-CCCceEEEeCCCCCCCce
Confidence 57999999999999999999999 98 899999998888764
No 270
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.97 E-value=7.5e-06 Score=72.11 Aligned_cols=126 Identities=10% Similarity=0.113 Sum_probs=78.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecH
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 169 (321)
.-.|+|||+|..|+.+|..|++. | +|.++++.... +
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~-g-~v~~v~~~~~~------------------------------~------------ 176 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDW-G-ETTFFTNGIVE------------------------------P------------ 176 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGT-S-EEEEECTTTCC------------------------------C------------
T ss_pred CCEEEEEecCccHHHHHHHhhhc-C-cEEEEECCCCC------------------------------C------------
Confidence 35899999999999999999999 8 99999876420 0
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCCCcchhh
Q 020815 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGV 249 (321)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~~~~~~~ 249 (321)
...+.+.+. +.|++++. +.++++.. +. .+... ++.++.+|.||+|+|......
T Consensus 177 ---~~~~~~~l~-~~gv~i~~-~~v~~i~~--~~--~v~~~--------------~g~~~~~D~vi~a~G~~p~~~---- 229 (297)
T 3fbs_A 177 ---DADQHALLA-ARGVRVET-TRIREIAG--HA--DVVLA--------------DGRSIALAGLFTQPKLRITVD---- 229 (297)
T ss_dssp ---CHHHHHHHH-HTTCEEEC-SCEEEEET--TE--EEEET--------------TSCEEEESEEEECCEEECCCS----
T ss_pred ---CHHHHHHHH-HCCcEEEc-ceeeeeec--CC--eEEeC--------------CCCEEEEEEEEEccCcccCch----
Confidence 011223333 57999986 78888743 22 44442 236799999999999543321
Q ss_pred hhhhhcCCcccccCCce--eecccccchhhcccccccccccccccchh
Q 020815 250 KRLKSIGMIEEVPGMKA--LDMNSAEDAIVRLTREVVPGMIVTGMEVA 295 (321)
Q Consensus 250 ~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~pg~~~~g~~~~ 295 (321)
.+.+.+... -.+..+ +..+. +.+...|++|++|+++.
T Consensus 230 -~~~~~g~~~-~~~~~G~~i~vd~-------~~~t~~~~vya~GD~~~ 268 (297)
T 3fbs_A 230 -WIEKLGCAV-EEGPMGSTIVTDP-------MKQTTARGIFACGDVAR 268 (297)
T ss_dssp -CHHHHTCCE-EEETTEEEECCCT-------TCBCSSTTEEECSGGGC
T ss_pred -hHHhcCCcc-ccCCCCceEEeCC-------CCccCCCCEEEEeecCC
Confidence 122222200 000011 21221 23356799999999874
No 271
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.89 E-value=4.6e-05 Score=72.09 Aligned_cols=106 Identities=14% Similarity=0.175 Sum_probs=66.2
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEec
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKH 168 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~ 168 (321)
.-+|+|||||..|+-+|..+.+. |. +|+++++..... +. . .
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~-Ga~~Vtiv~r~~~~~---~p--------------------------~--------~ 305 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQ-GATSVKCLYRRDRKN---MP--------------------------G--------S 305 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHT-TCSEEEEECSSCSTT---CS--------------------------S--------C
T ss_pred CCEEEEECCChhHHHHHHHHHHc-CCCEEEEEEeCCccC---CC--------------------------C--------C
Confidence 35799999999999999999998 77 599999875320 00 0 0
Q ss_pred HHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeeccee-cccCCC-----CCCCceEEEcCeEEEcCCC
Q 020815 169 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVS-MNHDTQ-----SCMDPNVMEAKVVVSSCGH 240 (321)
Q Consensus 169 ~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~-~~~~~~-----~~g~~~~i~a~~VI~AtG~ 240 (321)
... ++.+. +.|+++++++.++++.. ++++.++.+...... .+.++. .+++..++.+|.||+|+|.
T Consensus 306 ~~e-----~~~~~-~~Gv~~~~~~~~~~i~~-~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~ 376 (456)
T 2vdc_G 306 QRE-----VAHAE-EEGVEFIWQAAPEGFTG-DTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGF 376 (456)
T ss_dssp HHH-----HHHHH-HTTCEEECCSSSCCEEE-EEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCE
T ss_pred HHH-----HHHHH-HCCCEEEeCCCceEEeC-CCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCC
Confidence 011 12233 46999999998888864 455554444210000 000000 0123468999999999994
No 272
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.88 E-value=5.7e-05 Score=78.48 Aligned_cols=104 Identities=18% Similarity=0.232 Sum_probs=70.1
Q ss_pred cEEEECCChHHHHHHHHhhcCCCC-eEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
+|+|||||..|+-+|..|.+. |. +|+|+++.+.. . +.. ...
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~-G~~~Vtvv~r~~~~----~---------~~~------------------------~~~ 375 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRC-GARRVFLVFRKGFV----N---------IRA------------------------VPE 375 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHT-TCSEEEEECSSCGG----G---------CCS------------------------CHH
T ss_pred cEEEECCChHHHHHHHHHHHc-CCCEEEEEEecChh----h---------CCC------------------------CHH
Confidence 899999999999999999999 86 89999987410 0 000 001
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCC---CCCCceEEEcCeEEEcCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQ---SCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~---~~g~~~~i~a~~VI~AtG~~ 241 (321)
+ ++.+. +.|++++.++.++++..+++++.++.+.... .+.++. .+++..++.+|.||+|+|..
T Consensus 376 e-----~~~~~-~~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~--~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~ 441 (1025)
T 1gte_A 376 E-----VELAK-EEKCEFLPFLSPRKVIVKGGRIVAVQFVRTE--QDETGKWNEDEDQIVHLKADVVISAFGSV 441 (1025)
T ss_dssp H-----HHHHH-HTTCEEECSEEEEEEEEETTEEEEEEEEEEE--ECTTSCEEEEEEEEEEEECSEEEECSCEE
T ss_pred H-----HHHHH-HcCCEEEeCCCceEEEccCCeEEEEEEEEeE--EcCCCCcccCCCceEEEECCEEEECCCCC
Confidence 1 12233 4699999999999998778888887764210 000000 01123579999999999954
No 273
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.86 E-value=1.2e-05 Score=80.66 Aligned_cols=41 Identities=24% Similarity=0.400 Sum_probs=37.7
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAW 131 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~ 131 (321)
.+||+|||||++|+++|+.|++. |++|+|||+.+.+||.+.
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~-G~~Vtlie~~~~~GG~~~ 429 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMES-GYTVHLTDTAEKIGGHLN 429 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSTTTTHH
T ss_pred CceEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCcCCeee
Confidence 58999999999999999999999 999999999988887653
No 274
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.80 E-value=1.5e-05 Score=79.11 Aligned_cols=39 Identities=26% Similarity=0.563 Sum_probs=36.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGG 129 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~ 129 (321)
.+||+|||+|++|+++|+.|++. |.+|+|+|+.+.+||.
T Consensus 107 ~~~v~viG~G~~gl~~a~~l~~~-g~~v~~~e~~~~~gg~ 145 (662)
T 2z3y_A 107 TGKVIIIGSGVSGLAAARQLQSF-GMDVTLLEARDRVGGR 145 (662)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHT-TCEEEEECSSSSSBTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHC-CCeEEEEecCCCCCCc
Confidence 58999999999999999999999 9999999999888874
No 275
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.78 E-value=0.00015 Score=68.56 Aligned_cols=57 Identities=18% Similarity=0.169 Sum_probs=35.0
Q ss_pred CCcEEEcCceEEEEEEECCEEEEEEEeecceecccCC------CCCCCceEEEcCeEEEcCCCCCC
Q 020815 184 PNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDT------QSCMDPNVMEAKVVVSSCGHDGP 243 (321)
Q Consensus 184 ~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~------~~~g~~~~i~a~~VI~AtG~~~~ 243 (321)
.|+++++++.+.++..+ +++.++.+.... ++.++ ..+|+..++.|+.||.|+|..+.
T Consensus 265 ~gv~i~~~~~~~~i~~~-~~v~~v~~~~~~--~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~ 327 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKGK-RKVERIVLGRNE--LVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGV 327 (456)
T ss_dssp EEEEEECSEEEEEEECS-SSCCEEEEEEEE--EEECSSSSEEEEEEEEEEEEECSEEEECSCEECC
T ss_pred ceEEEEeCCCCeEEecC-CcEeEEEEEEEE--ecCCCcccccccCCCceEEEEcCEEEEccccccC
Confidence 68999999999998644 455555553210 00000 00123357999999999995543
No 276
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.76 E-value=3.1e-05 Score=68.91 Aligned_cols=128 Identities=13% Similarity=0.126 Sum_probs=80.7
Q ss_pred ccEEEECCCh-HHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecH
Q 020815 91 TDVVVVGAGS-AGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (321)
Q Consensus 91 ~DVvIIGgG~-aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 169 (321)
-+++|||||. +++.+|..+.+. +.+|+++++....
T Consensus 147 ~~~~VIggG~~~~~e~a~~~~~~-~~~v~i~~~~~~~------------------------------------------- 182 (304)
T 4fk1_A 147 QPLIIISENEDHTLHMTKLVYNW-STDLVIATNGNEL------------------------------------------- 182 (304)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTT-CSCEEEECSSCCC-------------------------------------------
T ss_pred CceeeecCCCchhhhHHHHHHhC-CceEEEEeccccc-------------------------------------------
Confidence 4688888885 567888888888 8999999875321
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCCCcchhh
Q 020815 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGV 249 (321)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~~~~~~~ 249 (321)
...+.+.+. +.|++++.+ .+..+..+++++..|.+.+ +.++.++.+|++.|+..+..
T Consensus 183 ---~~~~~~~l~-~~g~~~~~~-~v~~~~~~~~~~~~v~~~~--------------g~~i~~~~~vi~~g~~~~~~---- 239 (304)
T 4fk1_A 183 ---SQTIMDELS-NKNIPVITE-SIRTLQGEGGYLKKVEFHS--------------GLRIERAGGFIVPTFFRPNQ---- 239 (304)
T ss_dssp ---CHHHHHHHH-TTTCCEECS-CEEEEESGGGCCCEEEETT--------------SCEECCCEEEECCEEECSSC----
T ss_pred ---hhhhhhhhh-ccceeEeee-eEEEeecCCCeeeeeeccc--------------cceeeecceeeeeccccCCh----
Confidence 012233343 678888877 4666666666777777642 36788999999999766532
Q ss_pred hhhhhcCCcccccCCceeecccccchhhcccccccccccccccchh
Q 020815 250 KRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVA 295 (321)
Q Consensus 250 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~g~~~~ 295 (321)
.+.+.+.. +.....+..+ .+.+...|++|++||++.
T Consensus 240 -~~~~~g~~--~~~~G~I~vd-------~~~~Ts~p~IyA~GDv~~ 275 (304)
T 4fk1_A 240 -FIEQLGCE--LQSNGTFVID-------DFGRTSEKNIYLAGETTT 275 (304)
T ss_dssp -HHHHTTCC--CCTTSSSCSS-------TTCBCSSTTEEECSHHHH
T ss_pred -hhhhcCeE--ECCCCCEEEC-------cCCccCCCCEEEEeccCC
Confidence 23333321 1001111121 234567899999999874
No 277
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.75 E-value=6.6e-05 Score=77.50 Aligned_cols=97 Identities=15% Similarity=0.212 Sum_probs=69.8
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.|+|||+|..|+.+|..|++. |.+|+|||+.+.+. . .
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~-G~~Vtvv~~~~~~~----------------------------------------~-~ 322 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAAT-GGVVAVIDARSSIS----------------------------------------A-A 322 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGG-TCCSEEEESCSSCC----------------------------------------H-H
T ss_pred CeEEEEcCCHHHHHHHHHHHHc-CCcEEEEECCCccc----------------------------------------h-h
Confidence 4799999999999999999999 99999999975320 0 0
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEE-CCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~-~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
.+.+. +.||+++.++.++++..+ ++++.+|.+.+. +..+ .+|+..++.+|.||+|+|-.
T Consensus 323 ------~~~l~-~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~----~~~~-~~G~~~~i~~D~Vv~a~G~~ 382 (965)
T 2gag_A 323 ------AAQAV-ADGVQVISGSVVVDTEADENGELSAIVVAEL----DEAR-ELGGTQRFEADVLAVAGGFN 382 (965)
T ss_dssp ------HHHHH-HTTCCEEETEEEEEEEECTTSCEEEEEEEEE----CTTC-CEEEEEEEECSEEEEECCEE
T ss_pred ------HHHHH-hCCeEEEeCCEeEEEeccCCCCEEEEEEEec----cccC-CCCceEEEEcCEEEECCCcC
Confidence 12333 579999999999999764 566767766420 0000 00123689999999999943
No 278
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.74 E-value=2.3e-05 Score=79.50 Aligned_cols=39 Identities=26% Similarity=0.563 Sum_probs=36.4
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGG 129 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~ 129 (321)
.+||+|||+|++||++|+.|++. |++|+|+|+...+||.
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~-g~~v~v~E~~~~~GG~ 316 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSF-GMDVTLLEARDRVGGR 316 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSCTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCcEEEEEecCcCCCc
Confidence 47999999999999999999999 9999999999888874
No 279
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.66 E-value=0.00016 Score=68.42 Aligned_cols=34 Identities=15% Similarity=0.098 Sum_probs=31.4
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVS 125 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~ 125 (321)
-.|+|||+|.+|+-+|..|++. |.+|+|+++.+.
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~-g~~V~li~~~~~ 231 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKY-GAKKLISCYRTA 231 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHT-TCSEEEEECSSC
T ss_pred CEEEEEcCCCCHHHHHHHHHHh-CCeEEEEEECCC
Confidence 4799999999999999999999 999999998754
No 280
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.62 E-value=4.3e-05 Score=74.94 Aligned_cols=40 Identities=25% Similarity=0.338 Sum_probs=38.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCcc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA 130 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~ 130 (321)
+|||+|||+|..|...|..|++. |++|++|||++..||.+
T Consensus 8 ~~D~~i~GtGl~~~~~a~~~~~~-g~~vl~id~~~~~gg~~ 47 (650)
T 1vg0_A 8 DFDVIVIGTGLPESIIAAACSRS-GQRVLHVDSRSYYGGNW 47 (650)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCGGG
T ss_pred cCCEEEECCcHHHHHHHHHHHhC-CCEEEEEcCCCcccCcc
Confidence 79999999999999999999999 99999999999999886
No 281
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.57 E-value=4.4e-05 Score=73.22 Aligned_cols=35 Identities=26% Similarity=0.438 Sum_probs=32.7
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.+||+||||+|++|+.+|++|++. |.+|+|||++.
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~-~~~v~~~e~~~ 44 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQA-GIPTQIVEMGR 44 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCcEEEEECCC
Confidence 369999999999999999999998 99999999875
No 282
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.33 E-value=6.4e-05 Score=74.59 Aligned_cols=36 Identities=31% Similarity=0.571 Sum_probs=33.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCC--------CeEEEEeccC-CC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPN--------IQIAIIEQSV-SP 126 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G--------~~V~liEk~~-~~ 126 (321)
..+|+|||||++||++|+.|++. | .+|+|+|+++ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~-g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRL-AATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH-HTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CcccccCCCceEEEEeccCccc
Confidence 36899999999999999999998 7 9999999987 77
No 283
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.29 E-value=0.0024 Score=61.62 Aligned_cols=35 Identities=20% Similarity=0.327 Sum_probs=32.2
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVS 125 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~ 125 (321)
.-.|+|||+|..|+.+|..|++. +.+|+++++.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~-~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPE-VEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTT-CSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhh-CCEEEEEECCCC
Confidence 35899999999999999999999 999999999864
No 284
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.26 E-value=0.00053 Score=68.62 Aligned_cols=109 Identities=13% Similarity=0.103 Sum_probs=66.1
Q ss_pred ccEEEEC--CChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEec
Q 020815 91 TDVVVVG--AGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKH 168 (321)
Q Consensus 91 ~DVvIIG--gG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~ 168 (321)
-.|+||| ||..|+.+|..|++. |.+|+|+++.+ +.... .+.. .
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~-G~~Vtlv~~~~-l~~~~---------------------~~~~------------~ 573 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATA-GHEVTIVSGVH-LANYM---------------------HFTL------------E 573 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHT-TCEEEEEESSC-TTHHH---------------------HHTT------------C
T ss_pred CeEEEEcCCCCchHHHHHHHHHHc-CCEEEEEeccc-ccccc---------------------cccc------------c
Confidence 4799998 999999999999999 99999999975 32100 0000 0
Q ss_pred HHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEe--eccee-cc---c-CCCCCCCceEEEcCeEEEcCCCC
Q 020815 169 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTN--WALVS-MN---H-DTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 169 ~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~--~~~~~-~~---~-~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
...+.+.+. +.||+++.++.++++. ++.+. +... ++... .. . .....++..++.+|.||+|+|..
T Consensus 574 ----~~~~~~~l~-~~GV~i~~~~~v~~i~--~~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~ 645 (729)
T 1o94_A 574 ----YPNMMRRLH-ELHVEELGDHFCSRIE--PGRME-IYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRH 645 (729)
T ss_dssp ----HHHHHHHHH-HTTCEEECSEEEEEEE--TTEEE-EEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEE
T ss_pred ----HHHHHHHHH-hCCCEEEcCcEEEEEE--CCeEE-EEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCC
Confidence 123334443 5799999999999885 33322 1111 00000 00 0 00011233569999999999954
Q ss_pred C
Q 020815 242 G 242 (321)
Q Consensus 242 ~ 242 (321)
.
T Consensus 646 p 646 (729)
T 1o94_A 646 S 646 (729)
T ss_dssp E
T ss_pred C
Confidence 3
No 285
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.26 E-value=0.00084 Score=62.88 Aligned_cols=55 Identities=7% Similarity=0.092 Sum_probs=33.1
Q ss_pred HHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 177 MSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 177 ~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
.+.+. +.||+++.++.++++. ++.+.-.... .++ ..++..++.+|.||+|+|..+
T Consensus 215 ~~~l~-~~gI~~~~~~~v~~v~--~~~v~~~~~~-------~~g-~~~~~~~i~~D~vv~~~g~~~ 269 (437)
T 3sx6_A 215 TKGLK-EEGIEAYTNCKVTKVE--DNKMYVTQVD-------EKG-ETIKEMVLPVKFGMMIPAFKG 269 (437)
T ss_dssp HHHHH-HTTCEEECSEEEEEEE--TTEEEEEEEC-------TTS-CEEEEEEEECSEEEEECCEEC
T ss_pred HHHHH-HCCCEEEcCCEEEEEE--CCeEEEEecc-------cCC-ccccceEEEEeEEEEcCCCcC
Confidence 33343 6799999999998884 4433211110 000 001146899999999999544
No 286
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.25 E-value=0.0008 Score=60.42 Aligned_cols=32 Identities=25% Similarity=0.368 Sum_probs=29.0
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
-.|+|||+|..|+.+|..|++. + +|+++++..
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~-~-~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTV-A-ETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT-S-EEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhh-C-CEEEEECCC
Confidence 5899999999999999999998 7 699998863
No 287
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.03 E-value=0.00084 Score=64.88 Aligned_cols=34 Identities=15% Similarity=0.317 Sum_probs=31.8
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVS 125 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~ 125 (321)
-.|+|||+|..|+.+|..|++. +.+|+|+++.+.
T Consensus 186 krV~VIG~G~tgve~a~~la~~-~~~Vtv~~r~~~ 219 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAET-AKELYVFQRTPN 219 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT-BSEEEEEESSCC
T ss_pred CeEEEECCCccHHHHHHHHHhh-CCEEEEEEcCCC
Confidence 4799999999999999999999 999999999864
No 288
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.00 E-value=0.00069 Score=63.28 Aligned_cols=52 Identities=13% Similarity=0.112 Sum_probs=34.2
Q ss_pred HHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 175 TIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 175 ~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
.+.+.+. +.||+++.++.|+++. ++. +.+.+ .++++.++.+|.||+|+|..+
T Consensus 205 ~l~~~l~-~~GV~i~~~~~v~~v~--~~~---v~~~~----------~~~~g~~i~~D~vv~a~G~~~ 256 (430)
T 3h28_A 205 LVEDLFA-ERNIDWIANVAVKAIE--PDK---VIYED----------LNGNTHEVPAKFTMFMPSFQG 256 (430)
T ss_dssp HHHHHHH-HTTCEEECSCEEEEEC--SSE---EEEEC----------TTSCEEEEECSEEEEECEEEC
T ss_pred HHHHHHH-HCCCEEEeCCEEEEEe--CCe---EEEEe----------cCCCceEEeeeEEEECCCCcc
Confidence 3334443 6799999999999884 333 22321 011347899999999999543
No 289
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=96.98 E-value=0.0012 Score=61.98 Aligned_cols=34 Identities=21% Similarity=0.109 Sum_probs=31.0
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCe-EEEEeccC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQ-IAIIEQSV 124 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~-V~liEk~~ 124 (321)
.-+|+|||+|.+|+-+|..|++. +.+ |+|+++..
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~-~~~~V~l~~r~~ 246 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPV-AKHPIYQSLLGG 246 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTT-SCSSEEEECTTC
T ss_pred CCEEEEEccCcCHHHHHHHHHHH-hCCcEEEEeCCC
Confidence 35899999999999999999999 888 99999874
No 290
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=96.87 E-value=0.002 Score=59.53 Aligned_cols=51 Identities=14% Similarity=0.173 Sum_probs=35.2
Q ss_pred HHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 172 FTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 172 ~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
+...+.+.+. +.||+++.+++++++. .+. |.+. ++.++.+|.||+|+|..+
T Consensus 220 ~~~~~~~~l~-~~gV~~~~~~~v~~i~--~~~---v~~~--------------~g~~~~~D~vi~a~G~~~ 270 (409)
T 3h8l_A 220 SRKAVASIYN-QLGIKLVHNFKIKEIR--EHE---IVDE--------------KGNTIPADITILLPPYTG 270 (409)
T ss_dssp HHHHHHHHHH-HHTCEEECSCCEEEEC--SSE---EEET--------------TSCEEECSEEEEECCEEC
T ss_pred HHHHHHHHHH-HCCCEEEcCCceEEEC--CCe---EEEC--------------CCCEEeeeEEEECCCCCc
Confidence 3444444444 5799999999998884 332 4442 236899999999999544
No 291
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.78 E-value=0.0078 Score=58.11 Aligned_cols=35 Identities=23% Similarity=0.413 Sum_probs=32.1
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVS 125 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~ 125 (321)
.-.|+|||+|..|+.+|..|++. +.+|+++++.+.
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~-~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQ-AEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-BSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHhh-CCEEEEEECCCC
Confidence 35899999999999999999999 999999999864
No 292
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.77 E-value=0.0058 Score=60.44 Aligned_cols=29 Identities=24% Similarity=0.409 Sum_probs=25.0
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEE
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAI 119 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~l 119 (321)
.-.|+|||||..|+.+|..|++. |.+|.+
T Consensus 494 ~~~VvVIGgG~~g~E~A~~l~~~-G~~vtv 522 (671)
T 1ps9_A 494 GNKVAIIGCGGIGFDTAMYLSQP-GESTSQ 522 (671)
T ss_dssp CSEEEEECCHHHHHHHHHHHTCC-SSCGGG
T ss_pred CCeEEEECCChhHHHHHHHHHhc-CCCccc
Confidence 35899999999999999999998 876653
No 293
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.30 E-value=0.018 Score=45.58 Aligned_cols=33 Identities=18% Similarity=0.323 Sum_probs=30.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
-.|+|||+|..|...|..|.+. |.+|++++++.
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~-g~~V~vid~~~ 52 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSS-GHSVVVVDKNE 52 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCG
T ss_pred CcEEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 5799999999999999999999 99999999864
No 294
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=95.23 E-value=0.029 Score=53.23 Aligned_cols=45 Identities=9% Similarity=0.114 Sum_probs=33.2
Q ss_pred CCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 183 RPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 183 ~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
+.|++++.++.++++..+ +++.++... ++.++.+|.||+|+|-..
T Consensus 269 ~~GV~v~~~~~v~~i~~~-~~v~~v~~~--------------~g~~i~aD~Vv~a~G~~p 313 (493)
T 1y56_A 269 RWGIDYVHIPNVKRVEGN-EKVERVIDM--------------NNHEYKVDALIFADGRRP 313 (493)
T ss_dssp HHTCEEEECSSEEEEECS-SSCCEEEET--------------TCCEEECSEEEECCCEEE
T ss_pred hCCcEEEeCCeeEEEecC-CceEEEEeC--------------CCeEEEeCEEEECCCcCc
Confidence 469999999999998744 345455542 236899999999999443
No 295
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.12 E-value=0.023 Score=43.96 Aligned_cols=32 Identities=22% Similarity=0.462 Sum_probs=30.1
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.++|+|+|..|...|..|.+. |.+|+++|+++
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~-g~~V~~id~~~ 39 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAA-GKKVLAVDKSK 39 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCeEEEEECCH
Confidence 699999999999999999999 99999999864
No 296
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.07 E-value=0.029 Score=43.50 Aligned_cols=33 Identities=27% Similarity=0.415 Sum_probs=30.8
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
-.|+|||.|..|...|..|.+. |.+|+++|++.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~-g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS-DIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-TCCEEEEESCH
T ss_pred CCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCH
Confidence 4799999999999999999999 99999999874
No 297
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=95.00 E-value=0.16 Score=48.76 Aligned_cols=34 Identities=21% Similarity=0.475 Sum_probs=31.1
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVS 125 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~ 125 (321)
-.|+|||+|..|+..|..|++. +.+|+++++.+.
T Consensus 187 k~V~VIG~G~sg~e~a~~l~~~-~~~vtv~~r~~~ 220 (542)
T 1w4x_A 187 QRVGVIGTGSSGIQVSPQIAKQ-AAELFVFQRTPH 220 (542)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-BSEEEEEESSCC
T ss_pred CEEEEECCCccHHHHHHHHhhc-CceEEEEEcCCc
Confidence 5799999999999999999998 899999998753
No 298
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.87 E-value=0.029 Score=42.95 Aligned_cols=33 Identities=24% Similarity=0.437 Sum_probs=30.1
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
..|+|||+|..|...|..|.+. |.+|+++|+..
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~-g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK-GHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 3699999999999999999999 99999999863
No 299
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=94.63 E-value=0.029 Score=52.57 Aligned_cols=99 Identities=12% Similarity=0.148 Sum_probs=71.6
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.++|||||..|+.+|..|++. |.+|+|+|+.+.+... + ..
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~---------------------------~-----------~~ 208 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGL-GAKTHLFEMFDAPLPS---------------------------F-----------DP 208 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSSTT---------------------------S-----------CH
T ss_pred CeEEEECCCHHHHHHHHHHHhc-CCEEEEEEeCCchhhh---------------------------h-----------hH
Confidence 4899999999999999999999 9999999997532110 0 01
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~~ 243 (321)
.+.+.+.+.+. +.|++++.+++++++..+++....+.+.+ +.++.+|.||+|+|..+.
T Consensus 209 ~~~~~l~~~l~-~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~--------------g~~i~~D~vv~a~G~~p~ 266 (450)
T 1ges_A 209 MISETLVEVMN-AEGPQLHTNAIPKAVVKNTDGSLTLELED--------------GRSETVDCLIWAIGREPA 266 (450)
T ss_dssp HHHHHHHHHHH-HHSCEEECSCCEEEEEECTTSCEEEEETT--------------SCEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHH-HCCCEEEeCCEEEEEEEeCCcEEEEEECC--------------CcEEEcCEEEECCCCCcC
Confidence 23344455554 57999999999999987654323344421 257999999999995443
No 300
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=94.53 E-value=0.26 Score=46.74 Aligned_cols=34 Identities=24% Similarity=0.447 Sum_probs=29.3
Q ss_pred ccEEEECCChHHHHHHHHhhcC-CCCeEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKN-PNIQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~-~G~~V~liEk~~ 124 (321)
..|+|||+|.+|.-++..|++. ++.+|.++-+.+
T Consensus 247 KrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~ 281 (501)
T 4b63_A 247 YNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDS 281 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSS
T ss_pred cEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCC
Confidence 4799999999999999999863 378999998875
No 301
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.46 E-value=0.045 Score=42.98 Aligned_cols=32 Identities=13% Similarity=0.317 Sum_probs=30.0
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEecc
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS 123 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~ 123 (321)
-.++|+|+|..|...|..|.+. |.+|+++|+.
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~-g~~V~vid~~ 35 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQR-GQNVTVISNL 35 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-TCCEEEEECC
T ss_pred CcEEEECCCHHHHHHHHHHHHC-CCCEEEEECC
Confidence 4699999999999999999999 9999999986
No 302
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.34 E-value=0.042 Score=40.61 Aligned_cols=33 Identities=24% Similarity=0.416 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHhhcCCC-CeEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPN-IQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G-~~V~liEk~~ 124 (321)
..|+|+|+|..|..++..|.+. | .+|.++++..
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~-g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTS-SNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC-SSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCH
Confidence 3699999999999999999999 8 8999999863
No 303
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.21 E-value=0.041 Score=42.19 Aligned_cols=31 Identities=23% Similarity=0.347 Sum_probs=29.2
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEecc
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS 123 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~ 123 (321)
.|+|+|+|..|...|..|.+. |.+|+++|+.
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~-g~~v~~~d~~ 38 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRM-GHEVLAVDIN 38 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCCEEEESC
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 599999999999999999999 9999999985
No 304
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=93.91 E-value=0.05 Score=51.60 Aligned_cols=100 Identities=16% Similarity=0.119 Sum_probs=72.7
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.|+|||+|..|+.+|..|++. |.+|+|+|+.+.+... ...
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~~l~~--------------------------------------~d~ 215 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRL-GVIVKVFGRSGSVANL--------------------------------------QDE 215 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHT-TCEEEEECCTTCCTTC--------------------------------------CCH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEECCccccc--------------------------------------CCH
Confidence 4899999999999999999999 9999999998643210 012
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
.+.+.+.+.+. +. ++++.++.++++..+++.+. +.... .+|+..++.+|.||+|+|...
T Consensus 216 ~~~~~l~~~l~-~~-V~i~~~~~v~~i~~~~~~v~-v~~~~----------~~G~~~~i~~D~Vi~a~G~~p 274 (492)
T 3ic9_A 216 EMKRYAEKTFN-EE-FYFDAKARVISTIEKEDAVE-VIYFD----------KSGQKTTESFQYVLAATGRKA 274 (492)
T ss_dssp HHHHHHHHHHH-TT-SEEETTCEEEEEEECSSSEE-EEEEC----------TTCCEEEEEESEEEECSCCEE
T ss_pred HHHHHHHHHHh-hC-cEEEECCEEEEEEEcCCEEE-EEEEe----------CCCceEEEECCEEEEeeCCcc
Confidence 34455555555 45 99999999999987776544 33210 112336899999999999543
No 305
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=93.82 E-value=0.059 Score=50.17 Aligned_cols=58 Identities=14% Similarity=0.113 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 169 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 169 ~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
...+.+.|.+.+. +.|++|+.+++|++|..+++++.+|.+. +.+++||.||+|+|...
T Consensus 233 ~~~l~~~l~~~~~-~~G~~i~~~~~V~~I~~~~~~v~~v~~~---------------g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 233 LGELPQGFARLSA-IYGGTYMLNKPVDDIIMENGKVVGVKSE---------------GEVARCKQLICDPSYVP 290 (433)
T ss_dssp TTHHHHHHHHHHH-HHTCCCBCSCCCCEEEEETTEEEEEEET---------------TEEEECSEEEECGGGCG
T ss_pred HHHHHHHHHHHHH-HcCCEEECCCEEEEEEEeCCEEEEEEEC---------------CeEEECCEEEECCCCCc
Confidence 3567777777765 5699999999999999999988887752 36899999999999553
No 306
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=93.47 E-value=0.12 Score=49.23 Aligned_cols=56 Identities=11% Similarity=0.001 Sum_probs=42.0
Q ss_pred HHHHHcCCCcEEEcCceEEEEEEEC-C-EEEEEEEeecceecccCCCCCC---CceEEEcCeEEEcCCCCC
Q 020815 177 MSKLLARPNVKLFNAVAAEDLIVKG-G-RVGGVVTNWALVSMNHDTQSCM---DPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 177 ~~~~~~~~gv~i~~~~~v~~l~~~~-~-~v~gv~~~~~~~~~~~~~~~~g---~~~~i~a~~VI~AtG~~~ 242 (321)
+..+.+..|++|+.++.|++|+.++ + +++||++.. .++ ...+++|+.||+|+|+++
T Consensus 233 l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~----------~~g~~~~~~~~~A~~VIlaaGa~~ 293 (507)
T 1coy_A 233 LAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQID----------EQGNVVATKVVTADRVFFAAGSVG 293 (507)
T ss_dssp HHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEEC----------TTSCEEEEEEEEEEEEEECSHHHH
T ss_pred HHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeC----------CCCcccccEEEEeCEEEEccCccC
Confidence 4444446689999999999999986 4 799998742 011 136799999999999553
No 307
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.44 E-value=0.07 Score=50.06 Aligned_cols=33 Identities=21% Similarity=0.284 Sum_probs=30.6
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
-.|.|||.|.+|+++|..|.+. |++|.+.|...
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~-G~~V~~~D~~~ 42 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKL-GAIVTVNDGKP 42 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHT-TCEEEEEESSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-CCEEEEEeCCc
Confidence 4799999999999999999999 99999999854
No 308
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=93.44 E-value=0.057 Score=48.25 Aligned_cols=33 Identities=24% Similarity=0.436 Sum_probs=30.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
-.|.|||+|..|...|..++.. |++|+|+|..+
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~-G~~V~l~D~~~ 39 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASG-GFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred CeEEEECCcHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 4799999999999999999999 99999999864
No 309
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=93.33 E-value=0.12 Score=47.30 Aligned_cols=45 Identities=11% Similarity=-0.017 Sum_probs=32.5
Q ss_pred cCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCC
Q 020815 182 ARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (321)
Q Consensus 182 ~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~ 241 (321)
++.+++++.++.+..+..+++.. .+.+. ++.++.+|.||+|.|..
T Consensus 213 ~~~gi~v~~~~~v~~v~~~~~~~-~v~~~--------------~g~~i~~D~vi~~~g~~ 257 (401)
T 3vrd_B 213 ENALIEWHPGPDAAVVKTDTEAM-TVETS--------------FGETFKAAVINLIPPQR 257 (401)
T ss_dssp TTCSEEEECTTTTCEEEEETTTT-EEEET--------------TSCEEECSEEEECCCEE
T ss_pred HhcCcEEEeCceEEEEEecccce-EEEcC--------------CCcEEEeeEEEEecCcC
Confidence 46899999999888887665422 23332 23689999999999843
No 310
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=92.79 E-value=0.1 Score=48.03 Aligned_cols=35 Identities=29% Similarity=0.472 Sum_probs=32.1
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSP 126 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~ 126 (321)
-.++|||+|..|+.+|..|.+. |.+|+++|+.+.+
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtvv~~~~~~ 187 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKF-GVNVTLLEALPRV 187 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhc-CCeEEEEecCCch
Confidence 4799999999999999999999 9999999998654
No 311
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=92.79 E-value=0.09 Score=44.41 Aligned_cols=33 Identities=18% Similarity=0.342 Sum_probs=30.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEecc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS 123 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~ 123 (321)
.-.|+|||||..|...+..|.+. |.+|+|+++.
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~-GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQE-GAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGG-CCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEECCC
Confidence 45899999999999999999999 9999999875
No 312
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=92.56 E-value=0.091 Score=43.87 Aligned_cols=32 Identities=16% Similarity=0.333 Sum_probs=29.7
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.|+|||+|..|...|..|.+. |.+|+++|++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~-g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR-KYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT-TCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 489999999999999999999 99999999864
No 313
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=92.48 E-value=0.077 Score=46.27 Aligned_cols=34 Identities=21% Similarity=0.598 Sum_probs=31.0
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.-.|+|||||-.|...+..|.+. |.+|+|+++..
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~-Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPT-GCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGG-TCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhC-CCEEEEEcCCC
Confidence 35799999999999999999999 99999999864
No 314
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=92.40 E-value=0.11 Score=46.54 Aligned_cols=33 Identities=15% Similarity=0.359 Sum_probs=30.0
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC-eEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~~ 124 (321)
..|.|||+|..|...|..|++. |+ +|.|+|...
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~-g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR-ELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCh
Confidence 4799999999999999999998 87 999999864
No 315
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=92.03 E-value=0.11 Score=44.64 Aligned_cols=34 Identities=21% Similarity=0.500 Sum_probs=30.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeccC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~~ 124 (321)
...|+|||+|..|..+|..|++. |. +++|+|...
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~-Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASA-GVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHc-CCCeEEEEcCCC
Confidence 35899999999999999999998 86 899999874
No 316
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=92.01 E-value=0.14 Score=45.53 Aligned_cols=32 Identities=22% Similarity=0.422 Sum_probs=30.0
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.|.|||+|..|...|..|++. |.+|.++++..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~-g~~V~~~~r~~ 35 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAKT-GHCVSVVSRSD 35 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHHT-TCEEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCeEEEEeCCh
Confidence 699999999999999999999 99999999864
No 317
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=91.89 E-value=0.14 Score=45.03 Aligned_cols=32 Identities=22% Similarity=0.387 Sum_probs=29.8
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.|.|||+|..|...|..|++. |.+|+++|++.
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~-G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAAT-GHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 599999999999999999999 99999999863
No 318
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=91.88 E-value=0.15 Score=44.60 Aligned_cols=32 Identities=19% Similarity=0.397 Sum_probs=30.0
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.|.|||+|..|...|..|++. |++|+++|++.
T Consensus 6 kV~VIGaG~mG~~iA~~la~~-G~~V~l~d~~~ 37 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFH-GFAVTAYDINT 37 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 699999999999999999999 99999999864
No 319
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=91.81 E-value=0.15 Score=46.99 Aligned_cols=34 Identities=21% Similarity=0.321 Sum_probs=31.2
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
...|+|||+|.+|+.+|..|... |.+|+++|+..
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRL-GAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 46899999999999999999999 99999999874
No 320
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=91.59 E-value=0.16 Score=48.41 Aligned_cols=101 Identities=13% Similarity=0.183 Sum_probs=72.7
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.++|||+|..|+.+|..|++. |.+|+++|+.+.+... ...
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~-G~~Vtlv~~~~~~l~~--------------------------------------~~~ 255 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNAT-GRRTVMLVRTEPLKLI--------------------------------------KDN 255 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCTTTTC--------------------------------------CSH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEecCccccc--------------------------------------ccH
Confidence 5899999999999999999999 9999999997532110 012
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEEC-CEEEEEEEeecceecccCCCCCCCce-EEEcCeEEEcCCCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-GRVGGVVTNWALVSMNHDTQSCMDPN-VMEAKVVVSSCGHDGP 243 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~-~~v~gv~~~~~~~~~~~~~~~~g~~~-~i~a~~VI~AtG~~~~ 243 (321)
.+...+.+.+. +.|++++.+++|+++..++ +++.++.+.. . ++. ++.||.||+|+|....
T Consensus 256 ~~~~~l~~~l~-~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~----------~--~G~~~i~aD~Vv~A~G~~p~ 317 (523)
T 1mo9_A 256 ETRAYVLDRMK-EQGMEIISGSNVTRIEEDANGRVQAVVAMT----------P--NGEMRIETDFVFLGLGEQPR 317 (523)
T ss_dssp HHHHHHHHHHH-HTTCEEESSCEEEEEEECTTSBEEEEEEEE----------T--TEEEEEECSCEEECCCCEEC
T ss_pred HHHHHHHHHHH-hCCcEEEECCEEEEEEEcCCCceEEEEEEE----------C--CCcEEEEcCEEEECcCCccC
Confidence 34455555555 5799999999999998753 4443332211 0 124 7999999999996544
No 321
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=91.51 E-value=0.12 Score=48.17 Aligned_cols=34 Identities=26% Similarity=0.611 Sum_probs=30.8
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSP 126 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~ 126 (321)
.|+|||.|.+|+++|..|.+. |.+|++.|.....
T Consensus 7 ~v~viG~G~~G~~~a~~l~~~-G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 7 NVVIIGLGLTGLSCVDFFLAR-GVTPRVMDTRMTP 40 (439)
T ss_dssp CEEEECCHHHHHHHHHHHHTT-TCCCEEEESSSSC
T ss_pred EEEEEeecHHHHHHHHHHHhC-CCEEEEEECCCCc
Confidence 699999999999999999999 9999999986543
No 322
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=91.45 E-value=0.13 Score=39.90 Aligned_cols=33 Identities=15% Similarity=0.263 Sum_probs=29.7
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEecc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS 123 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~ 123 (321)
...|+|||+|..|...|..|.+. |.+|.++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~-g~~v~v~~r~ 53 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYP-QYKVTVAGRN 53 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTT-TCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEcCC
Confidence 34799999999999999999998 8999999986
No 323
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=91.43 E-value=0.85 Score=42.12 Aligned_cols=50 Identities=18% Similarity=0.209 Sum_probs=34.1
Q ss_pred HHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 178 SKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 178 ~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
++..++.||+++.++.|+++ +++++ .... .+++..++.+|.||+|+|..+
T Consensus 207 ~~~l~~~GV~~~~~~~v~~v--~~~~~---~~~~----------~~g~~~~i~~d~vi~~~G~~~ 256 (430)
T 3hyw_A 207 EDLFAERNIDWIANVAVKAI--EPDKV---IYED----------LNGNTHEVPAKFTMFMPSFQG 256 (430)
T ss_dssp HHHHHHTTCEEECSCEEEEE--CSSEE---EEEC----------TTSCEEEEECSEEEEECEEEC
T ss_pred HHHHHhCCeEEEeCceEEEE--eCCce---EEEe----------eCCCceEeecceEEEeccCCC
Confidence 33334689999999999987 34432 2221 123457899999999999554
No 324
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=91.40 E-value=0.17 Score=45.21 Aligned_cols=33 Identities=24% Similarity=0.436 Sum_probs=30.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
..|.|||+|..|...|..|++. |++|.++|+.+
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~-G~~V~l~d~~~ 39 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASG-GFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred ceEEEEeeCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 3699999999999999999999 99999999864
No 325
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=91.39 E-value=0.14 Score=45.27 Aligned_cols=32 Identities=22% Similarity=0.384 Sum_probs=29.9
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.|.|||+|..|...|..|++. |.+|.++++..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~-g~~V~~~~r~~ 35 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQRS-GEDVHFLLRRD 35 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHHT-SCCEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCeEEEEEcCc
Confidence 699999999999999999999 99999999864
No 326
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=91.30 E-value=0.16 Score=46.44 Aligned_cols=35 Identities=29% Similarity=0.486 Sum_probs=31.8
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCC-eEEEEeccC
Q 020815 89 ADTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (321)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~~ 124 (321)
.+..|||+|+|.+|+.+|..|... |. +|.++|+..
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~-Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAA-GATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHH-TCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHc-CCCeEEEEECCC
Confidence 467999999999999999999988 88 999999974
No 327
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=91.17 E-value=0.22 Score=44.57 Aligned_cols=33 Identities=18% Similarity=0.430 Sum_probs=30.2
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC-eEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~~ 124 (321)
..|.|||+|..|...|..|++. |+ +|.|+|...
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~-g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQK-DLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCH
Confidence 4799999999999999999998 88 999999864
No 328
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=91.12 E-value=0.19 Score=47.63 Aligned_cols=97 Identities=16% Similarity=0.210 Sum_probs=71.8
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.++|||+|..|+..|..|++. |.+|+++|+.+.+... ...
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~~l~~--------------------------------------~d~ 223 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTEL-GVPVTVVASQDHVLPY--------------------------------------EDA 223 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHT-TCCEEEECSSSSSSCC--------------------------------------SSH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEcCCccccc--------------------------------------cCH
Confidence 4799999999999999999999 9999999997542110 012
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
.+...+.+.+. +.|++++.+++|+++..+++.+ .+... ++.++.+|.||+|+|...
T Consensus 224 ~~~~~l~~~l~-~~GV~i~~~~~V~~i~~~~~~v-~v~~~--------------~g~~i~aD~Vv~a~G~~p 279 (499)
T 1xdi_A 224 DAALVLEESFA-ERGVRLFKNARAASVTRTGAGV-LVTMT--------------DGRTVEGSHALMTIGSVP 279 (499)
T ss_dssp HHHHHHHHHHH-HTTCEEETTCCEEEEEECSSSE-EEEET--------------TSCEEEESEEEECCCEEE
T ss_pred HHHHHHHHHHH-HCCCEEEeCCEEEEEEEeCCEE-EEEEC--------------CCcEEEcCEEEECCCCCc
Confidence 34445555554 6799999999999998766543 23321 236799999999999544
No 329
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=91.03 E-value=0.2 Score=44.42 Aligned_cols=33 Identities=27% Similarity=0.530 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC--eEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~liEk~~ 124 (321)
..|+|||+|..|...|..|++. |. +|.++|+..
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~-g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQR-GIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCh
Confidence 3699999999999999999998 88 999999863
No 330
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=90.80 E-value=0.19 Score=47.28 Aligned_cols=32 Identities=28% Similarity=0.502 Sum_probs=30.1
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.|+|+|+|-.|...|..|.+. |.+|++||+++
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~-~~~v~vId~d~ 36 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGE-NNDITIVDKDG 36 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCST-TEEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCCEEEEECCH
Confidence 699999999999999999999 99999999864
No 331
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=90.79 E-value=0.22 Score=45.19 Aligned_cols=33 Identities=27% Similarity=0.377 Sum_probs=30.1
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
-.|+|+|+|.+|..++..|... |.+|+++++..
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~-Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGL-GAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 5799999999999999999999 89999999863
No 332
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=90.76 E-value=0.16 Score=46.30 Aligned_cols=34 Identities=18% Similarity=0.234 Sum_probs=31.0
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
...|+|||+|.+|+.+|..|... |.+|+++|+..
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRL-GAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHH-TCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 45899999999999999999988 99999999874
No 333
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=90.64 E-value=0.24 Score=42.95 Aligned_cols=32 Identities=19% Similarity=0.227 Sum_probs=29.7
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.|.|||+|..|...|..|++. |.+|.++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ-GHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhC-CCCEEEEEcCc
Confidence 489999999999999999999 99999999865
No 334
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=90.56 E-value=0.27 Score=40.75 Aligned_cols=34 Identities=9% Similarity=0.241 Sum_probs=31.0
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVS 125 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~ 125 (321)
..|.|||+|..|...|..|++. |.+|.++++...
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~-g~~V~~~~~~~~ 53 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIA-GHEVTYYGSKDQ 53 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECTTCC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHH
Confidence 4799999999999999999999 999999998753
No 335
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=90.49 E-value=0.23 Score=45.83 Aligned_cols=34 Identities=24% Similarity=0.337 Sum_probs=30.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.-.|+|||+|.+|+.+|..|... |.+|+++|+..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSL-GAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 35799999999999999999888 99999999864
No 336
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=90.39 E-value=0.25 Score=44.19 Aligned_cols=31 Identities=23% Similarity=0.381 Sum_probs=29.3
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEecc
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS 123 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~ 123 (321)
.|.|||+|..|...|..|++. |.+|.++++.
T Consensus 5 kI~IiGaG~~G~~~a~~L~~~-g~~V~~~~r~ 35 (335)
T 3ghy_A 5 RICIVGAGAVGGYLGARLALA-GEAINVLARG 35 (335)
T ss_dssp CEEEESCCHHHHHHHHHHHHT-TCCEEEECCH
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCEEEEEECh
Confidence 699999999999999999999 9999999984
No 337
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=90.32 E-value=0.23 Score=46.71 Aligned_cols=102 Identities=16% Similarity=0.177 Sum_probs=71.4
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-.++|||+|..|+.+|..|++. |.+|+++++...... + ..
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~l~~----------------------------~-----------d~ 227 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGL-GYEPTVMVRSIVLRG----------------------------F-----------DQ 227 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSCSSTT----------------------------S-----------CH
T ss_pred CcEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCCCCcc----------------------------c-----------CH
Confidence 4799999999999999999999 999999998521100 0 02
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
++.+.+.+.+. +.|++++.++.+.++..+++....|...++ .+++..++.+|.||+|+|...
T Consensus 228 ~~~~~l~~~l~-~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~---------~~~~~~~~~~D~vi~a~G~~p 289 (483)
T 3dgh_A 228 QMAELVAASME-ERGIPFLRKTVPLSVEKQDDGKLLVKYKNV---------ETGEESEDVYDTVLWAIGRKG 289 (483)
T ss_dssp HHHHHHHHHHH-HTTCCEEETEEEEEEEECTTSCEEEEEEET---------TTCCEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHH-hCCCEEEeCCEEEEEEEcCCCcEEEEEecC---------CCCceeEEEcCEEEECccccc
Confidence 34445555554 679999999999999875443223444321 112345899999999999543
No 338
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=90.20 E-value=0.23 Score=45.31 Aligned_cols=34 Identities=24% Similarity=0.403 Sum_probs=31.2
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCC-eEEEEecc
Q 020815 89 ADTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQS 123 (321)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~ 123 (321)
.+..|+|+|+|.+|..+|..|... |. +|.++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~-G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDL-GVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH-TCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhC-CCCeEEEEECC
Confidence 467999999999999999999998 87 89999997
No 339
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=90.19 E-value=0.26 Score=43.54 Aligned_cols=32 Identities=25% Similarity=0.476 Sum_probs=29.1
Q ss_pred cEEEECCChHHHHHHHHhhcCCCC--eEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~--~V~liEk~~ 124 (321)
.|.|||+|..|...|+.|+.. |. +|.++|...
T Consensus 2 kI~VIGaG~vG~~la~~la~~-g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLR-GSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCH
Confidence 489999999999999999998 88 999999753
No 340
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=90.15 E-value=0.27 Score=46.32 Aligned_cols=97 Identities=11% Similarity=0.172 Sum_probs=72.4
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecHH
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 170 (321)
-+++|||+|..|+..|..|++. |.+|+++++.+.+... + ..
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~-g~~Vtli~~~~~~l~~---------------------------~-----------~~ 232 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGL-GVKTTLLHRGDLILRN---------------------------F-----------DY 232 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSSTT---------------------------S-----------CH
T ss_pred CcEEEECcCHHHHHHHHHHHHc-CCeEEEEECCCccccc---------------------------c-----------CH
Confidence 4899999999999999999999 9999999997532100 0 02
Q ss_pred HHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
.+...+.+.+. +.|++++.++.|+++..+++.+ .+.+. ++.++.+|.||+|+|...
T Consensus 233 ~~~~~l~~~l~-~~Gv~i~~~~~V~~i~~~~~~v-~v~~~--------------~g~~i~aD~Vi~A~G~~p 288 (484)
T 3o0h_A 233 DLRQLLNDAMV-AKGISIIYEATVSQVQSTENCY-NVVLT--------------NGQTICADRVMLATGRVP 288 (484)
T ss_dssp HHHHHHHHHHH-HHTCEEESSCCEEEEEECSSSE-EEEET--------------TSCEEEESEEEECCCEEE
T ss_pred HHHHHHHHHHH-HCCCEEEeCCEEEEEEeeCCEE-EEEEC--------------CCcEEEcCEEEEeeCCCc
Confidence 33444555554 5799999999999998776654 44442 125799999999999544
No 341
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=90.14 E-value=0.19 Score=40.51 Aligned_cols=34 Identities=24% Similarity=0.208 Sum_probs=29.1
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
-.|+|||+|..|...|..|.+..|.+|+++|++.
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 4799999999999999999873168999999864
No 342
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=90.13 E-value=0.27 Score=42.59 Aligned_cols=32 Identities=19% Similarity=0.360 Sum_probs=29.7
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEecc
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS 123 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~ 123 (321)
..++|+|+|.+|..+|..|++. |.+|+++.+.
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~-G~~V~v~~R~ 151 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSL-DCAVTITNRT 151 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHc-CCEEEEEECC
Confidence 4799999999999999999999 8999999886
No 343
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=90.08 E-value=0.27 Score=45.01 Aligned_cols=34 Identities=21% Similarity=0.296 Sum_probs=30.7
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.-.|+|||+|.+|+.++..|... |.+|+++|+..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRL-GAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 45899999999999999999888 99999999864
No 344
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=90.07 E-value=0.26 Score=46.51 Aligned_cols=34 Identities=18% Similarity=0.351 Sum_probs=30.9
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
...|.|||.|..|+..|..|++. |.+|+++|++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~-G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADI-GHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 35899999999999999999999 99999999753
No 345
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=90.04 E-value=0.28 Score=45.89 Aligned_cols=98 Identities=7% Similarity=0.083 Sum_probs=72.0
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEecH
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 169 (321)
.-.++|||+|..|+..|..|++. |.+|+++++.+.+... ..
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~-g~~Vt~v~~~~~~l~~--------------------------------------~~ 210 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGL-GVKTTLIYRGKEILSR--------------------------------------FD 210 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSSTT--------------------------------------SC
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCeEEEEEcCCccccc--------------------------------------cC
Confidence 35899999999999999999999 9999999997532100 01
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEE-EeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVV-TNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~-~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
..+.+.+.+.+. +.|++++.++.|+++..+++.+..|. +. ++. +.+|.||+|+|...
T Consensus 211 ~~~~~~l~~~l~-~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~--------------~g~-i~aD~Vv~a~G~~p 268 (463)
T 4dna_A 211 QDMRRGLHAAME-EKGIRILCEDIIQSVSADADGRRVATTMK--------------HGE-IVADQVMLALGRMP 268 (463)
T ss_dssp HHHHHHHHHHHH-HTTCEEECSCCEEEEEECTTSCEEEEESS--------------SCE-EEESEEEECSCEEE
T ss_pred HHHHHHHHHHHH-HCCCEEECCCEEEEEEEcCCCEEEEEEcC--------------CCe-EEeCEEEEeeCccc
Confidence 234455555554 67999999999999987655433444 32 124 99999999999543
No 346
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=89.99 E-value=0.37 Score=45.21 Aligned_cols=34 Identities=18% Similarity=0.359 Sum_probs=31.1
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVS 125 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~ 125 (321)
..|.|||+|..|...|..|++. |++|+++|+...
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~a-G~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLA-GIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCeEEEEECcHH
Confidence 3699999999999999999999 999999998753
No 347
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=89.85 E-value=0.28 Score=42.93 Aligned_cols=32 Identities=22% Similarity=0.402 Sum_probs=29.6
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.|.|||+|..|...|..|++. |.+|.+++++.
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~r~~ 36 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQG-GNDVTLIDQWP 36 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred eEEEECcCHHHHHHHHHHHhC-CCcEEEEECCH
Confidence 699999999999999999999 99999999853
No 348
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=89.66 E-value=0.31 Score=44.31 Aligned_cols=33 Identities=24% Similarity=0.392 Sum_probs=30.2
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
-.|+|+|+|..|..+|..|... |.+|+++++..
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~-Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGM-GAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 5799999999999999999999 99999999863
No 349
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=89.56 E-value=0.2 Score=43.97 Aligned_cols=32 Identities=28% Similarity=0.563 Sum_probs=29.7
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.|.|||+|..|...|..|++. |.+|.++++..
T Consensus 4 kI~iiGaGa~G~~~a~~L~~~-g~~V~~~~r~~ 35 (294)
T 3g17_A 4 SVAIIGPGAVGTTIAYELQQS-LPHTTLIGRHA 35 (294)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-CTTCEEEESSC
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCeEEEEEecc
Confidence 699999999999999999998 89999999863
No 350
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=89.52 E-value=0.34 Score=45.27 Aligned_cols=35 Identities=14% Similarity=0.348 Sum_probs=32.1
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVS 125 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~ 125 (321)
...+.|||.|..|+..|..|++. |.+|++++++..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~-G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF-GHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCHH
Confidence 46899999999999999999999 999999998753
No 351
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=89.44 E-value=0.31 Score=45.06 Aligned_cols=33 Identities=15% Similarity=0.353 Sum_probs=30.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
-.|||||.|..|...|..|.+. |.+|++||+++
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~-g~~vvvId~d~ 37 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSS-GVKMVVLDHDP 37 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEEECCH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCCEEEEECCH
Confidence 3699999999999999999999 99999999864
No 352
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=89.41 E-value=0.32 Score=45.67 Aligned_cols=32 Identities=25% Similarity=0.422 Sum_probs=29.9
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.|.|||+|..|...|..|++. |++|+++|+..
T Consensus 39 kV~VIGaG~MG~~iA~~la~~-G~~V~l~D~~~ 70 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARV-GISVVAVESDP 70 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 599999999999999999999 99999999864
No 353
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=89.32 E-value=0.44 Score=42.26 Aligned_cols=33 Identities=27% Similarity=0.333 Sum_probs=30.6
Q ss_pred ccEEEECCChHHHHHHHHhhcCCC-CeEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPN-IQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G-~~V~liEk~~ 124 (321)
..|.|||.|..|...|..|++. | .+|.++++..
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~-G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR-NAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHc-CCCeEEEEeCCC
Confidence 3699999999999999999999 9 9999999874
No 354
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=89.17 E-value=0.4 Score=41.63 Aligned_cols=34 Identities=26% Similarity=0.534 Sum_probs=30.7
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
...++|||+|.+|.++|+.|.+. |.+|.|+.|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~-G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQ-GLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 35799999999999999999999 89999998863
No 355
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=89.17 E-value=0.32 Score=45.51 Aligned_cols=32 Identities=28% Similarity=0.425 Sum_probs=30.0
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.|.|||.|..|+..|..|++. |.+|+++|++.
T Consensus 4 kI~VIG~G~vG~~lA~~La~~-G~~V~~~D~~~ 35 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAEL-GANVRCIDTDR 35 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHhc-CCEEEEEECCH
Confidence 699999999999999999999 99999999864
No 356
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=89.14 E-value=0.39 Score=42.38 Aligned_cols=31 Identities=32% Similarity=0.647 Sum_probs=28.8
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.|+|||+|..|...|..|+ . |.+|.++++..
T Consensus 4 kI~IiGaGa~G~~~a~~L~-~-g~~V~~~~r~~ 34 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLS-L-YHDVTVVTRRQ 34 (307)
T ss_dssp EEEEECCSHHHHHHHHHHH-T-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHh-c-CCceEEEECCH
Confidence 6999999999999999999 8 99999999864
No 357
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=89.08 E-value=0.37 Score=43.38 Aligned_cols=33 Identities=18% Similarity=0.472 Sum_probs=29.9
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeccCC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVS 125 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~ 125 (321)
.|+|||||..|..+++.+.+. |++|+++|.++.
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~-G~~vv~vd~~~~ 35 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKA-GMKVVLVDKNPQ 35 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESCTT
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCCC
Confidence 499999999999999999999 999999997653
No 358
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=89.07 E-value=0.29 Score=43.44 Aligned_cols=33 Identities=24% Similarity=0.559 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC-eEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~~ 124 (321)
..|.|||+|..|...|..|++. |. +|.++|...
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~-g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD-NLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCc
Confidence 3699999999999999999998 88 999999864
No 359
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=89.05 E-value=0.38 Score=42.93 Aligned_cols=33 Identities=21% Similarity=0.401 Sum_probs=29.7
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC-eEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~~ 124 (321)
..|.|||+|..|...|..|+.. |+ +|.|+|...
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~-g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK-NLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCeEEEEeCCH
Confidence 3699999999999999999998 87 999999764
No 360
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=88.86 E-value=0.38 Score=43.87 Aligned_cols=34 Identities=29% Similarity=0.527 Sum_probs=30.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.-.|+|||+|..|..+|..|... |.+|+++++..
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~-Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGM-GATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 35799999999999999999998 99999999863
No 361
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=88.67 E-value=0.4 Score=42.91 Aligned_cols=32 Identities=19% Similarity=0.244 Sum_probs=29.6
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEecc
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS 123 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~ 123 (321)
..|.|||+|..|...|..|++. |.+|.++++.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~-g~~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK-GQSVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEEEEeCC
Confidence 3699999999999999999999 9999999985
No 362
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=88.59 E-value=0.44 Score=41.95 Aligned_cols=33 Identities=18% Similarity=0.412 Sum_probs=29.8
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEecc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQS 123 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~ 123 (321)
...++|||+|.+|..+|..|.+. |. +|+|+.+.
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~-G~~~V~v~nR~ 174 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLST-AAERIDMANRT 174 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCSEEEEECSS
T ss_pred CCEEEEECcHHHHHHHHHHHHHC-CCCEEEEEeCC
Confidence 34799999999999999999999 87 89999886
No 363
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=88.54 E-value=0.37 Score=42.85 Aligned_cols=32 Identities=34% Similarity=0.670 Sum_probs=28.4
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC--eEEEEecc
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQS 123 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~liEk~ 123 (321)
..|+|||+|..|...|+.|+.. +. .+.|+|..
T Consensus 7 ~KI~IIGaG~vG~~la~~l~~~-~~~~ei~L~Di~ 40 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLVNQ-SIVDELVIIDLD 40 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-CSCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCC
Confidence 5899999999999999999987 64 89999864
No 364
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=88.44 E-value=0.51 Score=41.93 Aligned_cols=32 Identities=25% Similarity=0.587 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC-eEEEEecc
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQS 123 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~ 123 (321)
-.|.|||+|..|...|+.|+.. |+ +|.|+|..
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~-g~~~v~l~D~~ 41 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQK-ELADVVLVDIP 41 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCeEEEEecc
Confidence 4799999999999999999998 88 99999987
No 365
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=88.40 E-value=0.3 Score=41.05 Aligned_cols=32 Identities=25% Similarity=0.451 Sum_probs=29.3
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
-.++|+|+|..|...|..|.+. |. |+++|+++
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~-g~-v~vid~~~ 41 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGS-EV-FVLAEDEN 41 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTS-EE-EEEESCGG
T ss_pred CEEEEECCChHHHHHHHHHHhC-Ce-EEEEECCH
Confidence 4799999999999999999998 89 99999874
No 366
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=88.33 E-value=0.41 Score=42.43 Aligned_cols=31 Identities=23% Similarity=0.412 Sum_probs=28.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEecc
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS 123 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~ 123 (321)
..|.|||+|..|...|..|++. |.+|.++ ++
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~-G~~V~l~-~~ 50 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARA-GHEVILI-AR 50 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-TCEEEEE-CC
T ss_pred CcEEEECcCHHHHHHHHHHHHC-CCeEEEE-Ec
Confidence 4799999999999999999999 9999999 54
No 367
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=88.26 E-value=0.44 Score=43.10 Aligned_cols=33 Identities=21% Similarity=0.370 Sum_probs=30.4
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
..|.|||+|..|.+.|..|++. |.+|.++++.+
T Consensus 30 mkI~VIGaG~mG~alA~~La~~-G~~V~l~~r~~ 62 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARK-GQKVRLWSYES 62 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTT-TCCEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 4799999999999999999999 99999999863
No 368
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=88.14 E-value=0.43 Score=44.97 Aligned_cols=34 Identities=26% Similarity=0.433 Sum_probs=30.7
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.-.++|+|+|..|..+|..|+.. |.+|+++|+.+
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~-GA~Viv~D~~~ 298 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQA-GARVIVTEIDP 298 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 35799999999999999999999 99999999753
No 369
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=88.13 E-value=0.46 Score=42.35 Aligned_cols=33 Identities=27% Similarity=0.369 Sum_probs=30.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEecc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS 123 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~ 123 (321)
+..|.|||+|..|...|..|++. |.+|.++++.
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~-G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHEN-GEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-CCeEEEEeCC
Confidence 45899999999999999999999 9999999885
No 370
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=88.11 E-value=0.46 Score=41.45 Aligned_cols=31 Identities=39% Similarity=0.699 Sum_probs=28.6
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEecc
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS 123 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~ 123 (321)
-.++|+|+|..|.++|..|++. | +|+++.+.
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~-G-~V~v~~r~ 159 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKD-N-NIIIANRT 159 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSS-S-EEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHC-C-CEEEEECC
Confidence 4699999999999999999999 8 99999876
No 371
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=88.03 E-value=0.43 Score=40.92 Aligned_cols=34 Identities=21% Similarity=0.480 Sum_probs=30.1
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeccC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~~ 124 (321)
...|+|||+|..|..+|..|++. |. +++|+|...
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~-Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGA-GVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHT-TCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHc-CCCeEEEEeCCC
Confidence 46899999999999999999999 76 788998764
No 372
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=87.95 E-value=0.4 Score=41.70 Aligned_cols=32 Identities=25% Similarity=0.414 Sum_probs=29.5
Q ss_pred cEEEECC-ChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVGA-GSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGg-G~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.|.|||+ |..|...|..|.+. |.+|.++++..
T Consensus 13 ~I~iIG~tG~mG~~la~~l~~~-g~~V~~~~r~~ 45 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIHDS-AHHLAAIEIAP 45 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHHHS-SSEEEEECCSH
T ss_pred EEEEECCCCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 6999999 99999999999999 99999999763
No 373
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=87.94 E-value=0.35 Score=41.93 Aligned_cols=32 Identities=22% Similarity=0.387 Sum_probs=29.8
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEecc
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS 123 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~ 123 (321)
..++|+|+|.+|..+|..|++. |.+|+|+.|.
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~-G~~v~v~~R~ 151 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQA-QQNIVLANRT 151 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHT-TCEEEEEESS
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCEEEEEECC
Confidence 4799999999999999999999 8999999886
No 374
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=87.93 E-value=0.51 Score=41.47 Aligned_cols=33 Identities=24% Similarity=0.397 Sum_probs=30.2
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
+-.|.|||+|..|...|..|+ . |++|+++|+.+
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-a-G~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-S-KHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T-TSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-c-CCEEEEEECCH
Confidence 458999999999999999999 8 99999999864
No 375
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=87.82 E-value=0.46 Score=44.54 Aligned_cols=32 Identities=19% Similarity=0.284 Sum_probs=30.0
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEecc
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS 123 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~ 123 (321)
-.|+|||+|..|...+..|.+. |.+|+|+++.
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~-ga~V~vi~~~ 44 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEA-GARLTVNALT 44 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TBEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-cCEEEEEcCC
Confidence 4799999999999999999999 9999999975
No 376
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=87.80 E-value=0.51 Score=41.92 Aligned_cols=33 Identities=18% Similarity=0.428 Sum_probs=29.7
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEecc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQS 123 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~ 123 (321)
...++|+|+|.+|.++|+.|++. |. +|.|+.|.
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~-Ga~~V~i~nR~ 187 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALD-GVKEISIFNRK 187 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT-TCSEEEEEECS
T ss_pred CCEEEEECCChHHHHHHHHHHHC-CCCEEEEEECC
Confidence 35799999999999999999999 88 89999886
No 377
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=87.74 E-value=0.57 Score=41.82 Aligned_cols=33 Identities=12% Similarity=0.308 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC-eEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~~ 124 (321)
..|.|||+|..|.+.|+.|+.. ++ ++.|+|...
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~-~~~~v~L~Di~~ 41 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLK-ELGDVVLFDIAE 41 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCeEEEEeCCc
Confidence 4799999999999999999998 88 999999864
No 378
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=87.70 E-value=0.52 Score=42.28 Aligned_cols=34 Identities=24% Similarity=0.473 Sum_probs=30.2
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeccC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~~ 124 (321)
...|+|||+|..|..+|..|++. |. +++|+|...
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~a-GVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHc-CCCEEEEecCCE
Confidence 46899999999999999999999 75 688999864
No 379
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=87.67 E-value=1.1 Score=43.78 Aligned_cols=56 Identities=7% Similarity=-0.061 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHcCCCcEEEcCceEEEEEEEC--CEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCC
Q 020815 169 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG--GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCG 239 (321)
Q Consensus 169 ~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~--~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG 239 (321)
...+.+.|.+.+. ..|.+|+.++.|.+|..++ +++.||... ++.+++||.||....
T Consensus 377 ~g~L~qaL~r~~~-~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~--------------~Ge~i~A~~VVs~~~ 434 (650)
T 1vg0_A 377 QGELPQCFCRMCA-VFGGIYCLRHSVQCLVVDKESRKCKAVIDQ--------------FGQRIISKHFIIEDS 434 (650)
T ss_dssp TTHHHHHHHHHHH-HTTCEEESSCCEEEEEEETTTCCEEEEEET--------------TSCEEECSEEEEEGG
T ss_pred hhHHHHHHHHHHH-HcCCEEEeCCEeeEEEEeCCCCeEEEEEeC--------------CCCEEEcCEEEEChh
Confidence 3566677777665 6899999999999999987 889998853 237899999988444
No 380
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=87.60 E-value=0.54 Score=41.58 Aligned_cols=33 Identities=21% Similarity=0.543 Sum_probs=28.8
Q ss_pred cEEEECCChHHHHHHHHhhcCC-CCeEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNP-NIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~-G~~V~liEk~~ 124 (321)
.|.|||+|..|...|..|++.+ +.+|.++|++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4899999999999999999841 68999999864
No 381
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=87.52 E-value=0.41 Score=44.52 Aligned_cols=32 Identities=25% Similarity=0.374 Sum_probs=29.4
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.|.|||+|..|+..|..|++. |.+|++++++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~-G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR-GHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 489999999999999999999 99999999853
No 382
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=87.50 E-value=0.5 Score=41.98 Aligned_cols=33 Identities=36% Similarity=0.621 Sum_probs=28.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC--eEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~liEk~~ 124 (321)
..|.|||+|..|.+.|+.|+.. +. ++.++|...
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~-~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQ-GIADEIVLIDANE 41 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCCCEEEEEeCCc
Confidence 4799999999999999999886 54 899999753
No 383
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=87.49 E-value=0.54 Score=41.57 Aligned_cols=32 Identities=22% Similarity=0.426 Sum_probs=28.9
Q ss_pred cEEEECCChHHHHHHHHhhcCCCC-eEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~~ 124 (321)
.|.|||+|..|...|+.|+.. |. +|.++|...
T Consensus 4 kI~VIGaG~vG~~~a~~la~~-g~~~v~L~Di~~ 36 (309)
T 1ur5_A 4 KISIIGAGFVGSTTAHWLAAK-ELGDIVLLDIVE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCCc
Confidence 699999999999999999998 76 899999753
No 384
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=87.47 E-value=0.62 Score=38.29 Aligned_cols=32 Identities=22% Similarity=0.323 Sum_probs=29.1
Q ss_pred cEEEEC-CChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVG-AGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIG-gG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.|+||| +|..|...|..|++. |.+|.++++..
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~-g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATL-GHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTT-TCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 489999 999999999999999 99999999863
No 385
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=87.44 E-value=0.54 Score=41.09 Aligned_cols=33 Identities=30% Similarity=0.526 Sum_probs=29.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEecc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQS 123 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~ 123 (321)
...++|+|+|.+|.++++.|++. |. +|.|+.|.
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~-G~~~v~i~~R~ 160 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTH-GVQKLQVADLD 160 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-CCCEEEEEECC
Confidence 45799999999999999999999 88 69999886
No 386
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=87.43 E-value=0.51 Score=42.03 Aligned_cols=33 Identities=9% Similarity=0.193 Sum_probs=29.3
Q ss_pred cEEEECCChHHHH-HHHHhhcCCCCeEEEEeccCC
Q 020815 92 DVVVVGAGSAGLS-CAYELSKNPNIQIAIIEQSVS 125 (321)
Q Consensus 92 DVvIIGgG~aGl~-aA~~La~~~G~~V~liEk~~~ 125 (321)
.|.|||.|.+|++ +|..|.+. |++|.+.|+...
T Consensus 6 ~i~~iGiGg~Gms~~A~~L~~~-G~~V~~~D~~~~ 39 (326)
T 3eag_A 6 HIHIIGIGGTFMGGLAAIAKEA-GFEVSGCDAKMY 39 (326)
T ss_dssp EEEEESCCSHHHHHHHHHHHHT-TCEEEEEESSCC
T ss_pred EEEEEEECHHHHHHHHHHHHhC-CCEEEEEcCCCC
Confidence 6999999999996 78888899 999999998653
No 387
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=87.34 E-value=0.43 Score=41.92 Aligned_cols=34 Identities=24% Similarity=0.389 Sum_probs=30.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeccC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~~ 124 (321)
...|+|||+|..|..+|..|++. |. +++|+|...
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~a-GVG~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRC-GIGKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHc-CCCEEEEECCCc
Confidence 46899999999999999999998 75 789999864
No 388
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=87.15 E-value=0.56 Score=40.78 Aligned_cols=32 Identities=25% Similarity=0.314 Sum_probs=30.0
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.|.|||.|..|...|..|++. |.+|.++++..
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 34 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKA-GCSVTIWNRSP 34 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSG
T ss_pred EEEEEeecHHHHHHHHHHHHC-CCeEEEEcCCH
Confidence 589999999999999999999 99999999875
No 389
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=87.13 E-value=0.61 Score=39.59 Aligned_cols=34 Identities=21% Similarity=0.325 Sum_probs=31.0
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
...|.|||+|..|...|..|++. |.+|.++++..
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~-G~~V~~~~r~~ 52 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADL-GHEVTIGTRDP 52 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCh
Confidence 35799999999999999999999 99999999864
No 390
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=87.07 E-value=0.56 Score=41.38 Aligned_cols=33 Identities=21% Similarity=0.431 Sum_probs=30.7
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
..|.|||.|..|...|..|++. |.+|.++++..
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~-G~~V~~~dr~~ 54 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKN-GFKVTVWNRTL 54 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSG
T ss_pred CEEEEECccHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 4799999999999999999999 99999999865
No 391
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=87.06 E-value=0.54 Score=41.18 Aligned_cols=34 Identities=12% Similarity=0.229 Sum_probs=31.2
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVS 125 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~ 125 (321)
..|.|||.|..|...|..|++. |.+|.+++++..
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~-G~~V~~~dr~~~ 49 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEW-PGGVTVYDIRIE 49 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTS-TTCEEEECSSTT
T ss_pred CeEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCHH
Confidence 4799999999999999999999 999999998754
No 392
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=87.04 E-value=0.55 Score=41.66 Aligned_cols=33 Identities=21% Similarity=0.427 Sum_probs=30.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
..|.|||.|..|...|..|++. |.+|.++++..
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEA-GYALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhC-CCeEEEEcCCH
Confidence 4799999999999999999999 99999999864
No 393
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=87.04 E-value=0.77 Score=45.30 Aligned_cols=99 Identities=17% Similarity=0.104 Sum_probs=67.2
Q ss_pred ccEEEEC--CChHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCcccchhhhccchHHHHHHHcCCCcccCCCeEEEec
Q 020815 91 TDVVVVG--AGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKH 168 (321)
Q Consensus 91 ~DVvIIG--gG~aGl~aA~~La~~~G~~V~liEk~~~~gg~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~ 168 (321)
-+|+||| +|..|+.+|..|++. |.+|+++++.+.+..... .
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~-g~~Vtlv~~~~~l~~~~~------~------------------------------ 566 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQK-GYEVSIVTPGAQVSSWTN------N------------------------------ 566 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHT-TCEEEEEESSSSTTGGGG------G------------------------------
T ss_pred CEEEEEcCCCCccHHHHHHHHHhC-CCeeEEEecccccccccc------c------------------------------
Confidence 4699999 999999999999999 999999998764321100 0
Q ss_pred HHHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCCCC
Q 020815 169 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (321)
Q Consensus 169 ~~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~~~ 242 (321)
..+...+.+.+. +.|++++.+++|+++. ++.+. +... .++++.++.+|.||+|+|...
T Consensus 567 -~~~~~~l~~~l~-~~GV~i~~~~~V~~i~--~~~~~-v~~~-----------~~~~~~~i~aD~VV~A~G~~p 624 (690)
T 3k30_A 567 -TFEVNRIQRRLI-ENGVARVTDHAVVAVG--AGGVT-VRDT-----------YASIERELECDAVVMVTARLP 624 (690)
T ss_dssp -GTCHHHHHHHHH-HTTCEEEESEEEEEEE--TTEEE-EEET-----------TTCCEEEEECSEEEEESCEEE
T ss_pred -chhHHHHHHHHH-HCCCEEEcCcEEEEEE--CCeEE-EEEc-----------cCCeEEEEECCEEEECCCCCC
Confidence 001233344444 5799999999999885 33221 2211 112346899999999999443
No 394
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=87.01 E-value=0.63 Score=38.66 Aligned_cols=33 Identities=18% Similarity=0.267 Sum_probs=29.8
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
..|.|||+|..|...|..|.+. |.+|.+++++.
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~-g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGS-GFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 3699999999999999999998 89999999863
No 395
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=87.00 E-value=0.51 Score=44.50 Aligned_cols=35 Identities=17% Similarity=0.366 Sum_probs=31.3
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC-eEEEEeccCC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSVS 125 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~~~ 125 (321)
..|.|||+|..|+..|..|++.+|. +|+++|++..
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 3799999999999999999997578 9999998754
No 396
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=86.97 E-value=0.51 Score=41.13 Aligned_cols=34 Identities=26% Similarity=0.413 Sum_probs=30.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeccC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~~ 124 (321)
...++|||+|.+|.++|+.|.+. |. +|.|+.|..
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~-G~~~v~v~~R~~ 151 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKI-VRPTLTVANRTM 151 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTT-CCSCCEEECSCG
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-CCCEEEEEeCCH
Confidence 35799999999999999999999 87 899998864
No 397
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=86.81 E-value=0.65 Score=41.28 Aligned_cols=33 Identities=24% Similarity=0.510 Sum_probs=29.4
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC--eEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~liEk~~ 124 (321)
..|.|||+|..|...|+.|+.. +. .+.++|...
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~-~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALR-QTANELVLIDVFK 42 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCSSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCh
Confidence 5799999999999999999998 77 899999764
No 398
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=86.75 E-value=0.69 Score=43.16 Aligned_cols=55 Identities=20% Similarity=0.193 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHcC-------CCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCC
Q 020815 170 ALFTSTIMSKLLAR-------PNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCG 239 (321)
Q Consensus 170 ~~~~~~l~~~~~~~-------~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG 239 (321)
..+.+.|.+.+.+. .+.+|+.+++|++|..+++.+. |.+. ++.+++||+||+|++
T Consensus 206 ~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~-v~~~--------------~g~~~~ad~vI~a~~ 267 (472)
T 1b37_A 206 EAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVT-VKTE--------------DNSVYSADYVMVSAS 267 (472)
T ss_dssp THHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEE-EEET--------------TSCEEEESEEEECSC
T ss_pred HHHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEE-EEEC--------------CCCEEEcCEEEEecC
Confidence 35566666655422 2678999999999998877655 5543 225799999999999
No 399
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=86.69 E-value=0.48 Score=42.13 Aligned_cols=32 Identities=25% Similarity=0.482 Sum_probs=28.9
Q ss_pred cEEEECCChHHHHHHHHhhcCCCC--eEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~--~V~liEk~~ 124 (321)
.|.|||+|..|...|..|++. |. +|.++|+..
T Consensus 2 kI~VIGaG~~G~~la~~l~~~-g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK-GFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCeEEEEeCCh
Confidence 489999999999999999998 88 999999863
No 400
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=86.63 E-value=0.62 Score=40.91 Aligned_cols=33 Identities=21% Similarity=0.227 Sum_probs=30.4
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
..|.|||.|..|...|..|++. |.+|.++++..
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 40 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRA-GLSTWGADLNP 40 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCeEEEEECCH
Confidence 4799999999999999999999 99999999864
No 401
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=86.57 E-value=0.75 Score=40.96 Aligned_cols=33 Identities=18% Similarity=0.319 Sum_probs=29.6
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC-eEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~~ 124 (321)
..|.|||+|..|.+.|+.|+.. ++ ++.|+|...
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~-~~~~v~l~Di~~ 39 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIK-QLGDVVLFDIAQ 39 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCh
Confidence 4699999999999999999998 77 999999864
No 402
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=86.55 E-value=0.72 Score=40.60 Aligned_cols=33 Identities=36% Similarity=0.418 Sum_probs=30.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
..|.|||.|..|...|..|++. |.+|.++++..
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~-G~~V~~~dr~~ 42 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQ-GKRVAIWNRSP 42 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 4799999999999999999999 99999999864
No 403
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=86.55 E-value=0.52 Score=43.95 Aligned_cols=33 Identities=15% Similarity=0.203 Sum_probs=30.4
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
..+.|||.|..|+..|..|++. |.+|+.+|.+.
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~-G~~V~g~Did~ 54 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALL-GHRVVGYDVNP 54 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCEEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHHhC-CCcEEEEECCH
Confidence 5799999999999999999999 99999999753
No 404
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=86.55 E-value=0.55 Score=44.33 Aligned_cols=32 Identities=25% Similarity=0.385 Sum_probs=30.0
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.|.|||+|..|...|..|++. |++|+++|++.
T Consensus 7 kVgVIGaG~MG~~IA~~la~a-G~~V~l~D~~~ 38 (483)
T 3mog_A 7 TVAVIGSGTMGAGIAEVAASH-GHQVLLYDISA 38 (483)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCeEEEEECCH
Confidence 699999999999999999999 99999999864
No 405
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=86.51 E-value=0.48 Score=42.74 Aligned_cols=32 Identities=28% Similarity=0.385 Sum_probs=29.6
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.|.|||+|..|...|..|++. |.+|.++++..
T Consensus 17 kI~iIG~G~mG~~la~~L~~~-G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKK-CREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTT-EEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 699999999999999999999 99999998753
No 406
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=86.48 E-value=0.67 Score=39.78 Aligned_cols=31 Identities=35% Similarity=0.579 Sum_probs=29.0
Q ss_pred cEEEECCChHHHHHHHHhhcCCCC-eEEEEecc
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQS 123 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~ 123 (321)
.++|||+|.+|.++++.|.+. |. +|.|+.|.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~-G~~~I~v~nR~ 141 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQM-GVKDIWVVNRT 141 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCCEEEEESC
T ss_pred eEEEECcHHHHHHHHHHHHHc-CCCEEEEEeCC
Confidence 899999999999999999998 87 89999986
No 407
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=86.37 E-value=0.49 Score=41.91 Aligned_cols=30 Identities=27% Similarity=0.375 Sum_probs=28.4
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEec
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQ 122 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk 122 (321)
.|.|||+|..|...|..|++. |.+|.++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~-g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN-GNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH-CCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCeEEEEEc
Confidence 489999999999999999998 999999998
No 408
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=86.26 E-value=0.78 Score=40.02 Aligned_cols=33 Identities=18% Similarity=0.367 Sum_probs=29.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEecc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQS 123 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~ 123 (321)
...++|+|+|.+|.++++.|++. |. +|.|+.|.
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~-G~~~v~v~~R~ 159 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQ-QPASITVTNRT 159 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-CCSEEEEEESS
T ss_pred CCEEEEECchHHHHHHHHHHHhc-CCCeEEEEECC
Confidence 35799999999999999999999 85 89999886
No 409
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=86.12 E-value=0.72 Score=40.88 Aligned_cols=33 Identities=21% Similarity=0.416 Sum_probs=29.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEecc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQS 123 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~ 123 (321)
...++|+|+|.+|.++|+.|++. |. +|.|+.|.
T Consensus 148 gk~~lVlGAGGaaraia~~L~~~-G~~~v~v~nRt 181 (312)
T 3t4e_A 148 GKTMVLLGAGGAATAIGAQAAIE-GIKEIKLFNRK 181 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHc-CCCEEEEEECC
Confidence 35799999999999999999999 87 79999886
No 410
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=86.08 E-value=0.83 Score=40.47 Aligned_cols=33 Identities=27% Similarity=0.351 Sum_probs=30.1
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC--eEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~liEk~~ 124 (321)
..|.|||.|..|.+.|..|.+. |. +|.++++..
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~-G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT-TCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-CCCCEEEEEECCH
Confidence 4799999999999999999999 88 999999864
No 411
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=86.00 E-value=0.62 Score=41.58 Aligned_cols=32 Identities=34% Similarity=0.613 Sum_probs=28.6
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC--eEEEEecc
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQS 123 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~liEk~ 123 (321)
..|.|||+|..|.++|+.|+.. +. .+.|+|..
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~~-~~~~el~l~D~~ 43 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVLQ-GIAQEIGIVDIF 43 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCCeEEEEeCC
Confidence 4799999999999999999987 66 89999974
No 412
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=85.97 E-value=0.74 Score=39.97 Aligned_cols=33 Identities=18% Similarity=0.327 Sum_probs=29.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEecc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQS 123 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~ 123 (321)
...++|+|+|.+|.++|+.|++. |. +|.|+.|.
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~-G~~~v~i~~R~ 153 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQA-GPSELVIANRD 153 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT-CCSEEEEECSC
T ss_pred CCEEEEECccHHHHHHHHHHHHc-CCCEEEEEeCC
Confidence 35799999999999999999999 85 89999886
No 413
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=85.90 E-value=0.64 Score=40.60 Aligned_cols=33 Identities=24% Similarity=0.346 Sum_probs=29.8
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEecc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQS 123 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~ 123 (321)
...++|+|+|.+|.++++.|.+. |. +|.|+.|.
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~-G~~~v~v~nRt 155 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDN-FAKDIYVVTRN 155 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHT-TCSEEEEEESC
T ss_pred CCEEEEECCcHHHHHHHHHHHHc-CCCEEEEEeCC
Confidence 45899999999999999999999 87 89999886
No 414
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=85.88 E-value=0.41 Score=39.93 Aligned_cols=33 Identities=24% Similarity=0.355 Sum_probs=29.3
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEE-EeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAI-IEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~l-iEk~~ 124 (321)
..|.|||+|..|...|..|++. |.+|.+ ++++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~-g~~V~~v~~r~~ 57 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA-QIPAIIANSRGP 57 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT-TCCEEEECTTCG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEECCCH
Confidence 3699999999999999999999 999998 77753
No 415
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=85.85 E-value=1.5 Score=39.71 Aligned_cols=34 Identities=18% Similarity=0.354 Sum_probs=30.8
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVS 125 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~ 125 (321)
..|+|||+|..|...+..+.+. |++|++++..+.
T Consensus 13 ~~IlIlG~G~lg~~la~aa~~l-G~~viv~d~~~~ 46 (377)
T 3orq_A 13 ATIGIIGGGQLGKMMAQSAQKM-GYKVVVLDPSED 46 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEECCCC
Confidence 4799999999999999999999 999999997643
No 416
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=85.79 E-value=0.62 Score=42.65 Aligned_cols=29 Identities=14% Similarity=0.358 Sum_probs=27.3
Q ss_pred cEEEECCChHHHHHHHHhhc-CCCCeEEEEe
Q 020815 92 DVVVVGAGSAGLSCAYELSK-NPNIQIAIIE 121 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~-~~G~~V~liE 121 (321)
.|.|||+|..|...|..|++ . |.+|.+++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~-G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRD-GVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTST-TEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCC-CCEEEEEe
Confidence 69999999999999999987 6 89999999
No 417
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=85.73 E-value=0.78 Score=40.12 Aligned_cols=33 Identities=21% Similarity=0.412 Sum_probs=30.4
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEecc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS 123 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~ 123 (321)
...|.|||.|..|..+|..|... |.+|+++++.
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~dr~ 187 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAAL-GAKVKVGARE 187 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-CCEEEEEECC
Confidence 45799999999999999999998 9999999986
No 418
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=85.67 E-value=0.78 Score=40.24 Aligned_cols=33 Identities=21% Similarity=0.394 Sum_probs=30.4
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEecc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS 123 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~ 123 (321)
...|.|||+|..|..+|..|... |.+|+++++.
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~d~~ 189 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAAL-GANVKVGARS 189 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred CCEEEEEcccHHHHHHHHHHHHC-CCEEEEEECC
Confidence 45799999999999999999999 9999999986
No 419
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=85.50 E-value=0.6 Score=41.03 Aligned_cols=32 Identities=28% Similarity=0.385 Sum_probs=28.6
Q ss_pred cEEEECCChHHHHHHHHhhcCCCC--eEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~--~V~liEk~~ 124 (321)
.|.|||+|..|.+.|+.|++. +. ++.|+|...
T Consensus 2 kI~ViGaG~vG~~la~~l~~~-~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN-LDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-SCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCeEEEEECCh
Confidence 489999999999999999998 77 899999754
No 420
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=85.50 E-value=0.6 Score=41.18 Aligned_cols=32 Identities=19% Similarity=0.328 Sum_probs=28.9
Q ss_pred cEEEECCChHHHHHHHHhhcCCC--CeEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPN--IQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G--~~V~liEk~~ 124 (321)
.|.|||+|..|...|..|++. | .+|.++|+..
T Consensus 3 kI~VIGaG~~G~~la~~L~~~-g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQ-GVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCEEEEEcCCH
Confidence 589999999999999999998 7 6899999853
No 421
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=85.46 E-value=0.61 Score=41.18 Aligned_cols=33 Identities=27% Similarity=0.681 Sum_probs=29.0
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC--eEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~liEk~~ 124 (321)
..|.|||+|..|...|+.|+.. |. .+.|+|...
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~-g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK-GIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCCCEEEEEcCCc
Confidence 4699999999999999999987 77 899999865
No 422
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=85.35 E-value=0.81 Score=39.80 Aligned_cols=32 Identities=19% Similarity=0.377 Sum_probs=29.4
Q ss_pred ccEEEEC-CChHHHHHHHHhhcCCCCeEEEEecc
Q 020815 91 TDVVVVG-AGSAGLSCAYELSKNPNIQIAIIEQS 123 (321)
Q Consensus 91 ~DVvIIG-gG~aGl~aA~~La~~~G~~V~liEk~ 123 (321)
..++|+| +|.+|..+|..|++. |.+|.++.+.
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~-G~~V~i~~R~ 152 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGE-GAEVVLCGRK 152 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHHC-cCEEEEEECC
Confidence 4799999 899999999999999 9999999886
No 423
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=85.34 E-value=0.63 Score=43.91 Aligned_cols=33 Identities=24% Similarity=0.433 Sum_probs=29.0
Q ss_pred cEEEECCChHHHHHHHHhhcCC-CCeEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNP-NIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~-G~~V~liEk~~ 124 (321)
.|.|||.|..|+..|..|++.+ |.+|+++|++.
T Consensus 11 kI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 11 KVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp EEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 6999999999999999999862 68999999753
No 424
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=85.26 E-value=2.5 Score=38.57 Aligned_cols=35 Identities=11% Similarity=0.085 Sum_probs=31.9
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVS 125 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~ 125 (321)
...++|+|+|..+...|..++.. |++|+|+|.++.
T Consensus 204 ~~rL~IfGAGhva~ala~~a~~l-g~~V~v~D~R~~ 238 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQGAFL-GYRVTVCDARPV 238 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHHHHT-TCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEECCchh
Confidence 46899999999999999999999 999999998754
No 425
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=85.16 E-value=0.83 Score=39.35 Aligned_cols=32 Identities=25% Similarity=0.290 Sum_probs=29.1
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.|.|||+|..|...|..|.+. |.+|.++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR-GHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 489999999999999999998 89999998763
No 426
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=85.07 E-value=0.87 Score=39.89 Aligned_cols=32 Identities=28% Similarity=0.395 Sum_probs=29.7
Q ss_pred cEEEEC-CChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVG-AGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIG-gG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.|.||| .|..|.+.|..|++. |.+|.++++..
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~-G~~V~~~~~~~ 55 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRAS-GYPISILDRED 55 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTT-TCCEEEECTTC
T ss_pred EEEEEcCCCHHHHHHHHHHHhC-CCeEEEEECCc
Confidence 699999 999999999999999 99999999864
No 427
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=84.95 E-value=0.64 Score=41.08 Aligned_cols=32 Identities=19% Similarity=0.269 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC-eEEEEecc
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQS 123 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~ 123 (321)
..|.|||.|..|...|..|++. |. +|.++++.
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~-G~~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQA-GAIDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-SCCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC-CCCeEEEEcCC
Confidence 4799999999999999999999 89 99999985
No 428
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=84.93 E-value=0.83 Score=43.86 Aligned_cols=34 Identities=21% Similarity=0.407 Sum_probs=31.7
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccCC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVS 125 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~~ 125 (321)
-.++|||+|-.|...|..|.+. |.+|++||+++.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~-g~~v~vid~d~~ 382 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRK-PVPFILIDRQES 382 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHC-CCCEEEEECChH
Confidence 5799999999999999999999 999999998764
No 429
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=84.86 E-value=0.68 Score=40.11 Aligned_cols=32 Identities=25% Similarity=0.514 Sum_probs=29.4
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEecc
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS 123 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~ 123 (321)
..++|||+|..|.+.|..|.+. |.+|.++++.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~-g~~V~v~~r~ 161 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKE-GAKVFLWNRT 161 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH-TCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHc-CCEEEEEECC
Confidence 4799999999999999999998 8899999886
No 430
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=84.81 E-value=0.82 Score=40.22 Aligned_cols=33 Identities=15% Similarity=0.249 Sum_probs=30.1
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
..|.|||+|..|...|..|++. |.+|.++++..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~-g~~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM-GHTVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 4699999999999999999998 99999999864
No 431
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=84.71 E-value=0.73 Score=40.27 Aligned_cols=32 Identities=19% Similarity=0.343 Sum_probs=29.8
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.|.|||.|..|...|..|++. |.+|.++++..
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~-G~~V~~~d~~~ 36 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKA-GYLLNVFDLVQ 36 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCEEEEECSSH
T ss_pred EEEEEeecHHHHHHHHHHHhC-CCeEEEEcCCH
Confidence 699999999999999999999 99999999864
No 432
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=84.69 E-value=0.69 Score=41.31 Aligned_cols=32 Identities=31% Similarity=0.604 Sum_probs=28.6
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC--eEEEEecc
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQS 123 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~liEk~ 123 (321)
..|.|||+|..|.++|+.|+.. |. ++.++|..
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~-~~~~~l~l~D~~ 39 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQ-GITDELVVIDVN 39 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCceEEEEecc
Confidence 4799999999999999999987 76 89999974
No 433
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=84.67 E-value=0.57 Score=40.74 Aligned_cols=32 Identities=16% Similarity=0.252 Sum_probs=29.9
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.|.|||.|..|...|..|++. |.+|.+++++.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRA-GFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-TCCEEEECSSG
T ss_pred eEEEEccCHHHHHHHHHHHHC-CCeEEEEcCCH
Confidence 589999999999999999999 99999999875
No 434
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=84.61 E-value=0.82 Score=40.79 Aligned_cols=33 Identities=33% Similarity=0.599 Sum_probs=28.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC--eEEEEecc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQS 123 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~--~V~liEk~ 123 (321)
...|.|||+|..|.+.|+.|+.. ++ .+.|+|..
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~-~~~~el~L~Di~ 43 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQ-GIAQEIGIVDIF 43 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHcC-CCCCEEEEEeCC
Confidence 45899999999999999999886 54 79999974
No 435
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=84.41 E-value=0.95 Score=43.70 Aligned_cols=34 Identities=24% Similarity=0.473 Sum_probs=30.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeccC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~~ 124 (321)
...|+|||+|..|..+|..|++. |. +++|+|...
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~a-GVG~ItLvD~D~ 361 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGT 361 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCCEEEEECCSB
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCc
Confidence 46899999999999999999999 76 789998763
No 436
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=84.36 E-value=0.95 Score=42.67 Aligned_cols=34 Identities=21% Similarity=0.342 Sum_probs=31.0
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
+.+|.|||.|..|...|..|++. |.+|.++++..
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~-G~~V~v~~r~~ 48 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESR-GYTVSIFNRSR 48 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTT-TCCEEEECSSH
T ss_pred CCeEEEEccHHHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 35899999999999999999999 99999999853
No 437
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=84.32 E-value=0.86 Score=42.08 Aligned_cols=51 Identities=8% Similarity=0.001 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCceEEEEEEECCE-EEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCC
Q 020815 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGR-VGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGH 240 (321)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~~-v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~ 240 (321)
..+.+.|.+. .|++|+.+++|++|..+++. +. |.+ ++.+++||.||+|++.
T Consensus 215 ~~l~~~l~~~----lg~~i~~~~~V~~i~~~~~~~v~-v~~---------------~~~~~~ad~VI~a~p~ 266 (453)
T 2yg5_A 215 QQVSIRMAEA----LGDDVFLNAPVRTVKWNESGATV-LAD---------------GDIRVEASRVILAVPP 266 (453)
T ss_dssp HHHHHHHHHH----HGGGEECSCCEEEEEEETTEEEE-EET---------------TTEEEEEEEEEECSCG
T ss_pred HHHHHHHHHh----cCCcEEcCCceEEEEEeCCceEE-EEE---------------CCeEEEcCEEEEcCCH
Confidence 3444555443 36899999999999988875 33 332 1267999999999984
No 438
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=84.32 E-value=0.82 Score=45.47 Aligned_cols=32 Identities=25% Similarity=0.349 Sum_probs=30.1
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.|.|||+|..|...|..|++. |++|+++|++.
T Consensus 314 kV~VIGaG~MG~~iA~~la~a-G~~V~l~D~~~ 345 (725)
T 2wtb_A 314 KVAIIGGGLMGSGIATALILS-NYPVILKEVNE 345 (725)
T ss_dssp CEEEECCSHHHHHHHHHHHTT-TCCEEEECSSH
T ss_pred EEEEEcCCHhhHHHHHHHHhC-CCEEEEEECCH
Confidence 599999999999999999999 99999999864
No 439
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=84.28 E-value=0.81 Score=42.36 Aligned_cols=34 Identities=26% Similarity=0.387 Sum_probs=30.8
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.-.|+|||.|..|..+|..|... |.+|+++|+.+
T Consensus 220 GktV~ViG~G~IGk~vA~~Lra~-Ga~Viv~D~dp 253 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALKAM-GSIVYVTEIDP 253 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC-CCEEEEEeCCh
Confidence 45899999999999999999988 99999999763
No 440
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=84.27 E-value=0.9 Score=42.24 Aligned_cols=31 Identities=23% Similarity=0.553 Sum_probs=28.8
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC---eEEEEe
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNI---QIAIIE 121 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~---~V~liE 121 (321)
+..|+|+|+|.+|.++|..|.+. |. +|.|++
T Consensus 186 ~~rvlvlGAGgAg~aia~~L~~~-G~~~~~I~vvd 219 (439)
T 2dvm_A 186 EITLALFGAGAAGFATLRILTEA-GVKPENVRVVE 219 (439)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHT-TCCGGGEEEEE
T ss_pred CCEEEEECccHHHHHHHHHHHHc-CCCcCeEEEEE
Confidence 46899999999999999999999 87 899999
No 441
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=84.27 E-value=1.1 Score=36.61 Aligned_cols=32 Identities=22% Similarity=0.362 Sum_probs=29.0
Q ss_pred cEEEECC-ChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVGA-GSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGg-G~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.|+|.|| |..|...+.+|.+. |.+|.++.+..
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNR-GHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhC-CCEEEEEEcCc
Confidence 3899996 99999999999999 99999999864
No 442
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=84.26 E-value=0.97 Score=42.82 Aligned_cols=34 Identities=9% Similarity=0.234 Sum_probs=31.3
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
...|.|||.|..|...|..|++. |.+|.++++..
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~-G~~V~v~dr~~ 43 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADH-GFTVCAYNRTQ 43 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 46899999999999999999999 99999999854
No 443
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=84.20 E-value=0.95 Score=39.04 Aligned_cols=32 Identities=28% Similarity=0.362 Sum_probs=28.8
Q ss_pred cEEEECCChHHHHHHHHhhcCCCC--eEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~--~V~liEk~~ 124 (321)
.|.|||+|..|...|..|++. |. +|.++++..
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~-g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-TCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhc-CCCcEEEEEeCCH
Confidence 489999999999999999998 87 899998753
No 444
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=84.13 E-value=0.81 Score=41.31 Aligned_cols=34 Identities=26% Similarity=0.526 Sum_probs=30.2
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeccC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~~ 124 (321)
...|+|||+|..|..+|..|++. |. +++|+|...
T Consensus 118 ~~~VlvvG~GglGs~va~~La~a-Gvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATS-GIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-TCSEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhC-CCCeEEEECCCc
Confidence 46899999999999999999998 75 789999864
No 445
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=84.04 E-value=0.91 Score=42.92 Aligned_cols=34 Identities=21% Similarity=0.466 Sum_probs=30.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.-.|+|||.|..|..+|..|... |.+|+++|+.+
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~-Ga~Viv~d~~~ 307 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQ-GARVSVTEIDP 307 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred cCEEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 45799999999999999999988 99999999864
No 446
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=84.04 E-value=0.98 Score=40.40 Aligned_cols=32 Identities=25% Similarity=0.694 Sum_probs=28.7
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC--eEEEEecc
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQS 123 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~liEk~ 123 (321)
..|.|||+|..|.+.|+.|+.. |. .+.|+|..
T Consensus 20 ~kV~ViGaG~vG~~~a~~l~~~-~~~~el~L~Di~ 53 (331)
T 4aj2_A 20 NKITVVGVGAVGMACAISILMK-DLADELALVDVI 53 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCceEEEEeCC
Confidence 5799999999999999999988 76 89999964
No 447
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=84.02 E-value=0.95 Score=43.79 Aligned_cols=34 Identities=24% Similarity=0.473 Sum_probs=30.4
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeccC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~~ 124 (321)
...|+|||+|..|..+|..|++. |. +++|+|...
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~a-GVG~ItLvD~D~ 360 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGT 360 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCC
Confidence 46899999999999999999998 75 789999864
No 448
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=83.98 E-value=0.77 Score=41.05 Aligned_cols=32 Identities=19% Similarity=0.475 Sum_probs=28.8
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC--eEEEEecc
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQS 123 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~liEk~ 123 (321)
..|.|||+|..|..+|+.|+.. |+ .+.++|..
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~-g~~~ev~L~Di~ 55 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMK-DLADEVALVDVM 55 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHH-CCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCCeEEEEECC
Confidence 4799999999999999999988 76 89999964
No 449
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=83.87 E-value=1.7 Score=39.54 Aligned_cols=33 Identities=18% Similarity=0.375 Sum_probs=30.3
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
..|+|||+|..|..++..|.+. |++|++++...
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~-G~~vi~~d~~~ 47 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEM-GYKIAVLDPTK 47 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEESST
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCC
Confidence 4799999999999999999999 99999999764
No 450
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=83.74 E-value=0.82 Score=41.14 Aligned_cols=34 Identities=18% Similarity=0.336 Sum_probs=30.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeccC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~~ 124 (321)
...|+|||+|..|..+|..|++. |. +++|+|...
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~-Gvg~itlvD~d~ 70 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILA-GVKGLTMLDHEQ 70 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCCEEEEEECCC
Confidence 57999999999999999999998 76 799998754
No 451
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=83.64 E-value=1.2 Score=36.67 Aligned_cols=32 Identities=22% Similarity=0.384 Sum_probs=29.2
Q ss_pred cEEEECC-ChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVGA-GSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGg-G~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.|+|.|| |..|...+.+|.+. |.+|.++.+..
T Consensus 2 kilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRR-GHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHC-CCEEEEEEecc
Confidence 3899998 99999999999999 99999999863
No 452
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=83.60 E-value=1.2 Score=37.08 Aligned_cols=33 Identities=24% Similarity=0.261 Sum_probs=30.1
Q ss_pred ccEEEECC-ChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 91 TDVVVVGA-GSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGg-G~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
..|+|.|| |..|..++.+|.+. |.+|.++.+..
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~-G~~V~~~~R~~ 55 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNK-GHEPVAMVRNE 55 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSG
T ss_pred CeEEEECCCChHHHHHHHHHHhC-CCeEEEEECCh
Confidence 46999998 99999999999999 99999999864
No 453
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=83.60 E-value=1 Score=41.16 Aligned_cols=41 Identities=17% Similarity=0.051 Sum_probs=31.3
Q ss_pred CCcEEEcCceEEEEEEECCEEEEEEEeecceecccCCCCCCCceEEEcCeEEEcCCC
Q 020815 184 PNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGH 240 (321)
Q Consensus 184 ~gv~i~~~~~v~~l~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~a~~VI~AtG~ 240 (321)
.+.+++.+++|++|..+++++. |.+.+ .+++||.||+|++.
T Consensus 216 l~~~v~~~~~V~~i~~~~~~v~-v~~~~---------------g~~~ad~Vv~a~~~ 256 (424)
T 2b9w_A 216 LEHPAERNVDITRITREDGKVH-IHTTD---------------WDRESDVLVLTVPL 256 (424)
T ss_dssp SSSCCBCSCCEEEEECCTTCEE-EEESS---------------CEEEESEEEECSCH
T ss_pred hcceEEcCCEEEEEEEECCEEE-EEECC---------------CeEEcCEEEECCCH
Confidence 3457899999999988777654 55421 34899999999994
No 454
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=83.60 E-value=1 Score=38.54 Aligned_cols=31 Identities=26% Similarity=0.561 Sum_probs=29.0
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEecc
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS 123 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~ 123 (321)
.++|||+|..|...|..|.+. |.+|.++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~-g~~v~v~~r~ 148 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREA-GLEVWVWNRT 148 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHHC-CCEEEEEECC
Confidence 799999999999999999998 8899999886
No 455
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=83.59 E-value=0.85 Score=40.46 Aligned_cols=32 Identities=22% Similarity=0.529 Sum_probs=28.4
Q ss_pred cEEEECCChHHHHHHHHhhcCCCC--eEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~--~V~liEk~~ 124 (321)
.|.|||+|..|.+.|+.|+.. ++ .+.++|...
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~-~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQ-DVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCch
Confidence 489999999999999999987 66 899999864
No 456
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=83.58 E-value=0.84 Score=42.40 Aligned_cols=33 Identities=21% Similarity=0.419 Sum_probs=30.6
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
..+-|||.|..|+..|..|++. |.+|+++|++.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~-G~~V~~~D~~~ 44 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKH-GVDVLGVDINQ 44 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CccEEEeeCHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 4788999999999999999999 99999999864
No 457
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=83.57 E-value=1.2 Score=35.92 Aligned_cols=32 Identities=16% Similarity=0.442 Sum_probs=29.5
Q ss_pred cEEEECC-ChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVGA-GSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGg-G~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.|+|+|| |..|...+.+|.+. |.+|.++.+..
T Consensus 5 ~ilVtGatG~iG~~l~~~l~~~-g~~V~~~~r~~ 37 (206)
T 1hdo_A 5 KIAIFGATGQTGLTTLAQAVQA-GYEVTVLVRDS 37 (206)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCG
T ss_pred EEEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeCh
Confidence 5999998 99999999999999 99999999864
No 458
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=83.57 E-value=1.1 Score=39.85 Aligned_cols=33 Identities=15% Similarity=0.129 Sum_probs=28.2
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEecc
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS 123 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~ 123 (321)
-.|+|+|+|..|+.++..|++..|.+|+.++..
T Consensus 165 ~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~ 197 (348)
T 4eez_A 165 DWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDIN 197 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTSCCEEEEEESC
T ss_pred CEEEEEcCCCccHHHHHHHHHhCCCEEEEEECc
Confidence 469999999999999988876548899999875
No 459
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=83.50 E-value=0.89 Score=39.55 Aligned_cols=32 Identities=19% Similarity=0.308 Sum_probs=29.5
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.|.|||+|..|...|..|.+. |.+|.++++..
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~~ 38 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKA-GYSLVVSDRNP 38 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred eEEEECchHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 699999999999999999998 99999998753
No 460
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=83.49 E-value=0.86 Score=38.82 Aligned_cols=32 Identities=25% Similarity=0.359 Sum_probs=28.9
Q ss_pred cEEEECCChHHHHHHHHhhcCCC-CeEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPN-IQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G-~~V~liEk~~ 124 (321)
.|.|||+|..|...|..|++. | .+|.++++..
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~-g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQ-GGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-CSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHC-CCCeEEEECCCH
Confidence 489999999999999999998 8 8999999853
No 461
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=83.38 E-value=0.82 Score=38.98 Aligned_cols=33 Identities=21% Similarity=0.221 Sum_probs=28.9
Q ss_pred ccEEEECC-C-hHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 91 TDVVVVGA-G-SAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGg-G-~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
--++|.|| | ..|..+|.+|++. |.+|++++++.
T Consensus 23 k~vlITGasg~GIG~~~a~~l~~~-G~~V~~~~r~~ 57 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRALLE-GADVVISDYHE 57 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CEEEEECCCCCchHHHHHHHHHHC-CCEEEEecCCH
Confidence 35899999 7 5999999999999 99999998763
No 462
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=83.36 E-value=1 Score=40.09 Aligned_cols=33 Identities=12% Similarity=0.219 Sum_probs=29.8
Q ss_pred cccEEEECCC-hHHHHHHHHhhcCCCCeEEEEecc
Q 020815 90 DTDVVVVGAG-SAGLSCAYELSKNPNIQIAIIEQS 123 (321)
Q Consensus 90 ~~DVvIIGgG-~aGl~aA~~La~~~G~~V~liEk~ 123 (321)
...++|||+| ..|..+|..|... |.+|+++++.
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~-gAtVtv~nR~ 210 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLAND-GATVYSVDVN 210 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTT-SCEEEEECSS
T ss_pred CCEEEEECCCcchHHHHHHHHHHC-CCEEEEEeCc
Confidence 4689999999 6799999999999 9999999876
No 463
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=83.31 E-value=0.9 Score=39.38 Aligned_cols=33 Identities=15% Similarity=0.379 Sum_probs=29.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEecc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQS 123 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~ 123 (321)
...++|||+|.+|.++++.|.+. |. +|.|+.|.
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~~-G~~~i~v~nRt 152 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKNS-GFEKLKIYARN 152 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHT-TCCCEEEECSC
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-CCCEEEEEeCC
Confidence 35799999999999999999998 86 79999886
No 464
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=83.29 E-value=1.1 Score=40.45 Aligned_cols=33 Identities=18% Similarity=0.342 Sum_probs=30.6
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
..|.|||.|..|...|..|++. |.+|.++++..
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~-G~~V~v~dr~~ 55 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKG-GHECVVYDLNV 55 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CEEEEECchHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 4799999999999999999999 99999999864
No 465
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=83.25 E-value=1.2 Score=38.20 Aligned_cols=32 Identities=13% Similarity=0.139 Sum_probs=29.8
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.|+|.|+|..|...+.+|.+. |.+|.++.+..
T Consensus 7 ~ilVtGaG~iG~~l~~~L~~~-g~~V~~~~r~~ 38 (286)
T 3ius_A 7 TLLSFGHGYTARVLSRALAPQ-GWRIIGTSRNP 38 (286)
T ss_dssp EEEEETCCHHHHHHHHHHGGG-TCEEEEEESCG
T ss_pred cEEEECCcHHHHHHHHHHHHC-CCEEEEEEcCh
Confidence 699999999999999999999 99999998864
No 466
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=83.12 E-value=1 Score=44.77 Aligned_cols=33 Identities=24% Similarity=0.424 Sum_probs=30.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
-.|.|||+|..|...|+.++.. |++|+|+|...
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~a-G~~V~l~D~~~ 349 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARV-GISVVAVESDP 349 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEECSSH
T ss_pred cEEEEEcccHHHHHHHHHHHhC-CCchhcccchH
Confidence 3799999999999999999999 99999999764
No 467
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=83.12 E-value=0.95 Score=39.29 Aligned_cols=32 Identities=25% Similarity=0.288 Sum_probs=29.3
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.|.|||.|..|...|..|++. |.+|.++++..
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~-g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKH-GYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHT-TCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 489999999999999999998 99999999864
No 468
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=82.70 E-value=0.75 Score=41.69 Aligned_cols=33 Identities=9% Similarity=0.175 Sum_probs=30.0
Q ss_pred cEEEECCChHHHHHHHHhhcCCC-------CeEEEEeccCC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPN-------IQIAIIEQSVS 125 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G-------~~V~liEk~~~ 125 (321)
.|.|||+|..|...|..|++. | .+|.++++...
T Consensus 23 kI~iIGaG~mG~alA~~L~~~-G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTN-AKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-HHHCTTBCSCEEEECCSCC
T ss_pred EEEEECcCHHHHHHHHHHHHc-CCccCCCCCeEEEEECChh
Confidence 699999999999999999998 8 89999998653
No 469
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=82.65 E-value=1.2 Score=40.42 Aligned_cols=33 Identities=15% Similarity=0.283 Sum_probs=30.0
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEecc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS 123 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~ 123 (321)
...|+|+|.|-.|..+|..|.+. |.+|++.|..
T Consensus 173 GktV~V~G~G~VG~~~A~~L~~~-GakVvv~D~~ 205 (364)
T 1leh_A 173 GLAVSVQGLGNVAKALCKKLNTE-GAKLVVTDVN 205 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred cCEEEEECchHHHHHHHHHHHHC-CCEEEEEcCC
Confidence 46799999999999999999999 9999998864
No 470
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=82.60 E-value=0.66 Score=41.53 Aligned_cols=33 Identities=21% Similarity=0.267 Sum_probs=30.0
Q ss_pred cEEEECCChHHHHHHHHhhcCCC-------CeEEEEeccCC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPN-------IQIAIIEQSVS 125 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G-------~~V~liEk~~~ 125 (321)
.|.|||+|..|...|..|++. | .+|.++++...
T Consensus 10 kI~iIG~G~mG~~~a~~l~~~-g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 10 KVCIVGSGNWGSAIAKIVGGN-AAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-HHHCTTEEEEEEEECCCCB
T ss_pred eEEEECCCHHHHHHHHHHHhc-CCcccCCCCeEEEEEcChh
Confidence 699999999999999999998 8 89999998653
No 471
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=82.25 E-value=0.95 Score=41.59 Aligned_cols=33 Identities=30% Similarity=0.542 Sum_probs=29.6
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEecc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQS 123 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~ 123 (321)
.-.|+|||+|..|..+|..|... |. +|+++++.
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~-G~~~V~v~~r~ 200 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDR-GVRAVLVANRT 200 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHH-CCSEEEEECSS
T ss_pred CCEEEEEChHHHHHHHHHHHHHC-CCCEEEEEeCC
Confidence 35799999999999999999988 87 89999886
No 472
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=82.16 E-value=1.2 Score=42.00 Aligned_cols=32 Identities=13% Similarity=0.396 Sum_probs=29.7
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
+|.|||.|..|...|..|++. |.+|.++++..
T Consensus 4 ~IgvIG~G~mG~~lA~~La~~-G~~V~v~dr~~ 35 (482)
T 2pgd_A 4 DIALIGLAVMGQNLILNMNDH-GFVVCAFNRTV 35 (482)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEECSST
T ss_pred eEEEEChHHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 699999999999999999999 99999999853
No 473
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=82.14 E-value=1.5 Score=37.60 Aligned_cols=32 Identities=22% Similarity=0.457 Sum_probs=29.9
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.|+|.|+|..|...+..|.+. |.+|.++.+..
T Consensus 5 ~ilVtGaG~iG~~l~~~L~~~-g~~V~~~~r~~ 36 (286)
T 3gpi_A 5 KILIAGCGDLGLELARRLTAQ-GHEVTGLRRSA 36 (286)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEEECTT
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCc
Confidence 599999999999999999999 99999999864
No 474
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=81.97 E-value=1.2 Score=37.90 Aligned_cols=33 Identities=18% Similarity=0.210 Sum_probs=29.8
Q ss_pred cEEEECCChHHHHHHHHhhcCCC----CeEEEEeccCC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPN----IQIAIIEQSVS 125 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G----~~V~liEk~~~ 125 (321)
.|.|||+|..|...|..|++. | .+|.++++...
T Consensus 6 ~i~iiG~G~mG~~~a~~l~~~-g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 6 KLGFMGLGQMGSALAHGIANA-NIIKKENLFYYGPSKK 42 (262)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-TSSCGGGEEEECSSCC
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCCCCCeEEEEeCCcc
Confidence 699999999999999999998 8 68999998754
No 475
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=81.88 E-value=1.4 Score=39.55 Aligned_cols=32 Identities=19% Similarity=0.339 Sum_probs=28.0
Q ss_pred ccEEEECC-ChHHHHHHHHhhcCCCC--eEEEEecc
Q 020815 91 TDVVVVGA-GSAGLSCAYELSKNPNI--QIAIIEQS 123 (321)
Q Consensus 91 ~DVvIIGg-G~aGl~aA~~La~~~G~--~V~liEk~ 123 (321)
..|+|||+ |..|..+|+.++.. |. +++|+|..
T Consensus 9 ~KV~ViGaaG~VG~~~a~~l~~~-g~~~evvLiDi~ 43 (343)
T 3fi9_A 9 EKLTIVGAAGMIGSNMAQTAAMM-RLTPNLCLYDPF 43 (343)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHT-TCCSCEEEECSC
T ss_pred CEEEEECCCChHHHHHHHHHHhc-CCCCEEEEEeCC
Confidence 47999998 99999999999987 64 89999974
No 476
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=81.79 E-value=1.3 Score=39.77 Aligned_cols=33 Identities=24% Similarity=0.226 Sum_probs=30.2
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
-.|.|||.|..|.+.|..|.+. |.+|.+++++.
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~-G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAA-NHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 3699999999999999999999 99999999864
No 477
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=81.74 E-value=1.2 Score=41.89 Aligned_cols=32 Identities=28% Similarity=0.534 Sum_probs=29.6
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
+|.|||+|..|...|..|++. |.+|.++++..
T Consensus 3 kIgVIG~G~mG~~lA~~La~~-G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEK-GFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 699999999999999999999 99999999853
No 478
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=81.50 E-value=1.5 Score=39.20 Aligned_cols=34 Identities=18% Similarity=0.208 Sum_probs=28.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.-.|+|+|+|..|+.++..+... |.+|+.++..+
T Consensus 177 g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~ 210 (348)
T 3two_A 177 GTKVGVAGFGGLGSMAVKYAVAM-GAEVSVFARNE 210 (348)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 34799999999999988777668 99999998764
No 479
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=81.40 E-value=1.6 Score=36.49 Aligned_cols=32 Identities=13% Similarity=0.219 Sum_probs=28.7
Q ss_pred cEEEECC-ChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVGA-GSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGg-G~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
-|+|.|| |..|..+|.+|++. |.+|+++.+..
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~~-g~~V~~~~r~~ 35 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLARA-GHTVIGIDRGQ 35 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred EEEEeCCCcHHHHHHHHHHHhC-CCEEEEEeCCh
Confidence 3899987 88999999999999 99999999864
No 480
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=81.32 E-value=1.2 Score=38.68 Aligned_cols=33 Identities=18% Similarity=0.308 Sum_probs=29.8
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
..|.|||+|..|...|..|.+. |.+|.++++..
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~~ 37 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKE-GVTVYAFDLME 37 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHT-TCEEEEECSSH
T ss_pred CEEEEECccHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 3699999999999999999998 99999999753
No 481
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=81.21 E-value=0.87 Score=43.43 Aligned_cols=32 Identities=34% Similarity=0.601 Sum_probs=27.8
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEecc
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS 123 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~ 123 (321)
..++|+|+|.+|.++|+.|++. |.+|+++.+.
T Consensus 365 k~vlV~GaGGig~aia~~L~~~-G~~V~i~~R~ 396 (523)
T 2o7s_A 365 KTVVVIGAGGAGKALAYGAKEK-GAKVVIANRT 396 (523)
T ss_dssp -CEEEECCSHHHHHHHHHHHHH-CC-CEEEESS
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCEEEEEECC
Confidence 3699999999999999999999 8999999876
No 482
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=81.06 E-value=1.4 Score=40.93 Aligned_cols=34 Identities=29% Similarity=0.475 Sum_probs=30.1
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCC-eEEEEeccC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~liEk~~ 124 (321)
...|+|||+|..|..+|..|++. |. +++|+|...
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~a-Gvg~i~ivD~D~ 74 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALS-GFRQIHVIDMDT 74 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHT-TCCCEEEEECCB
T ss_pred CCEEEEECcCHHHHHHHHHHHHc-CCCEEEEEcCCE
Confidence 46899999999999999999998 76 799998753
No 483
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=81.05 E-value=1.5 Score=40.79 Aligned_cols=32 Identities=19% Similarity=0.386 Sum_probs=28.7
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
..|.|||.|..|+..|..|++ |.+|+++|+..
T Consensus 37 mkIaVIGlG~mG~~lA~~La~--G~~V~~~D~~~ 68 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ--NHEVVALDIVQ 68 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT--TSEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHc--CCeEEEEecCH
Confidence 379999999999999999986 79999999864
No 484
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=80.98 E-value=1.1 Score=40.95 Aligned_cols=34 Identities=26% Similarity=0.342 Sum_probs=31.0
Q ss_pred cccEEEECC-ChHHHHHHHHhhcCCCC---eEEEEeccC
Q 020815 90 DTDVVVVGA-GSAGLSCAYELSKNPNI---QIAIIEQSV 124 (321)
Q Consensus 90 ~~DVvIIGg-G~aGl~aA~~La~~~G~---~V~liEk~~ 124 (321)
...|+|||+ |.+|+.|+..|... |. +|.++|.+.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~l-Ga~~~~V~v~D~~~ 251 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKV-GIPDANILKWDIKE 251 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHT-TCCGGGEEEECHHH
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhC-CCCcCceEEeeccc
Confidence 468999999 99999999999999 87 999999875
No 485
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=80.96 E-value=1.5 Score=38.10 Aligned_cols=33 Identities=18% Similarity=0.221 Sum_probs=28.7
Q ss_pred ccEEEECCC---hHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 91 TDVVVVGAG---SAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG---~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
--++|.||+ ..|..+|.+|++. |.+|+++++..
T Consensus 31 k~vlVTGasg~~GIG~~ia~~la~~-G~~V~~~~r~~ 66 (296)
T 3k31_A 31 KKGVIIGVANDKSLAWGIAKAVCAQ-GAEVALTYLSE 66 (296)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHT-TCEEEEEESSG
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHC-CCEEEEEeCCh
Confidence 358999985 7899999999999 99999998863
No 486
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=80.95 E-value=1.6 Score=37.78 Aligned_cols=33 Identities=18% Similarity=0.409 Sum_probs=29.8
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCC---eEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNI---QIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~---~V~liEk~~ 124 (321)
..|.|||+|..|.+.|..|.+. |. +|.+++++.
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~-g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIAN-GYDPNRICVTNRSL 39 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHT-TCCGGGEEEECSSS
T ss_pred CEEEEEcccHHHHHHHHHHHHC-CCCCCeEEEEeCCH
Confidence 4699999999999999999998 88 899999864
No 487
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=80.89 E-value=1.7 Score=35.71 Aligned_cols=32 Identities=16% Similarity=0.336 Sum_probs=28.5
Q ss_pred cEEEECC-ChHHHHHHHHhh-cCCCCeEEEEeccC
Q 020815 92 DVVVVGA-GSAGLSCAYELS-KNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGg-G~aGl~aA~~La-~~~G~~V~liEk~~ 124 (321)
-|+|.|| |..|...+..|+ +. |.+|+++.+..
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~-g~~V~~~~r~~ 40 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYT-DMHITLYGRQL 40 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHC-CCEEEEEESSH
T ss_pred EEEEEeCCcHHHHHHHHHHHhcC-CceEEEEecCc
Confidence 3999995 999999999999 78 99999999864
No 488
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=80.88 E-value=1.2 Score=39.42 Aligned_cols=31 Identities=23% Similarity=0.483 Sum_probs=27.7
Q ss_pred EEEECCChHHHHHHHHhhcCCCC-eEEEEeccC
Q 020815 93 VVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (321)
Q Consensus 93 VvIIGgG~aGl~aA~~La~~~G~-~V~liEk~~ 124 (321)
|.|||+|..|...|+.|+.. ++ .+.|+|...
T Consensus 2 I~IiGaG~vG~~~a~~l~~~-~l~el~L~Di~~ 33 (308)
T 2d4a_B 2 ITILGAGKVGMATAVMLMMR-GYDDLLLIARTP 33 (308)
T ss_dssp EEEECCSHHHHHHHHHHHHH-TCSCEEEECSST
T ss_pred EEEECcCHHHHHHHHHHHhC-CCCEEEEEcCCh
Confidence 79999999999999999987 77 599999863
No 489
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=80.84 E-value=1.5 Score=39.26 Aligned_cols=32 Identities=25% Similarity=0.421 Sum_probs=29.4
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.|.|||.|..|.+.|..|.+. |.+|++.++..
T Consensus 18 ~I~IIG~G~mG~alA~~L~~~-G~~V~~~~~~~ 49 (338)
T 1np3_A 18 KVAIIGYGSQGHAHACNLKDS-GVDVTVGLRSG 49 (338)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECCTT
T ss_pred EEEEECchHHHHHHHHHHHHC-cCEEEEEECCh
Confidence 699999999999999999998 89999998864
No 490
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=80.73 E-value=1.6 Score=41.13 Aligned_cols=33 Identities=12% Similarity=0.390 Sum_probs=30.7
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.+|.|||.|..|...|..|++. |.+|.++++..
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~-G~~V~v~dr~~ 37 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDH-GFVVCAFNRTV 37 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-TCCEEEECSST
T ss_pred CEEEEEChhHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 4799999999999999999999 99999999864
No 491
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=80.72 E-value=1 Score=44.68 Aligned_cols=33 Identities=24% Similarity=0.359 Sum_probs=30.5
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
..|.|||+|..|...|..|++. |++|+++|+..
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~a-G~~V~l~D~~~ 347 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASK-GTPILMKDINE 347 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred CEEEEECCChhhHHHHHHHHhC-CCEEEEEECCH
Confidence 3699999999999999999999 99999999864
No 492
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=80.61 E-value=2 Score=36.75 Aligned_cols=32 Identities=16% Similarity=0.109 Sum_probs=28.6
Q ss_pred cEEEECC---ChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVGA---GSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGg---G~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
-++|.|| |..|..+|..|++. |.+|+++.++.
T Consensus 8 ~vlVTGas~~~gIG~~~a~~l~~~-G~~V~~~~r~~ 42 (275)
T 2pd4_A 8 KGLIVGVANNKSIAYGIAQSCFNQ-GATLAFTYLNE 42 (275)
T ss_dssp EEEEECCCSTTSHHHHHHHHHHTT-TCEEEEEESST
T ss_pred EEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 5899997 58899999999999 99999999864
No 493
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=80.57 E-value=1.6 Score=38.68 Aligned_cols=32 Identities=22% Similarity=0.383 Sum_probs=28.5
Q ss_pred cEEEECC-ChHHHHHHHHhhcCCC--CeEEEEeccC
Q 020815 92 DVVVVGA-GSAGLSCAYELSKNPN--IQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGg-G~aGl~aA~~La~~~G--~~V~liEk~~ 124 (321)
.|+|||+ |..|...|+.|+.. + ..+.++|...
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~-~~~~ev~L~Di~~ 36 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNS-PLVSRLTLYDIAH 36 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTC-TTCSEEEEEESSS
T ss_pred EEEEECCCChHHHHHHHHHHhC-CCCcEEEEEeCCc
Confidence 4899998 99999999999987 7 6899999864
No 494
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=80.52 E-value=1.5 Score=40.13 Aligned_cols=31 Identities=29% Similarity=0.420 Sum_probs=27.9
Q ss_pred cEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.|.|||+|..|+..|..|++ |.+|++++++.
T Consensus 2 kI~VIG~G~vG~~~A~~La~--G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL--QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT--TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC--CCEEEEEECCH
Confidence 48999999999999999997 69999999853
No 495
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=80.39 E-value=1.9 Score=39.76 Aligned_cols=33 Identities=15% Similarity=0.306 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
..|+|+|+|..|...+..+.+. |++|.+++..+
T Consensus 36 ~~IlIlG~G~lg~~~~~aa~~l-G~~v~v~d~~~ 68 (419)
T 4e4t_A 36 AWLGMVGGGQLGRMFCFAAQSM-GYRVAVLDPDP 68 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEECCCC
Confidence 4799999999999999999999 99999998653
No 496
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=80.30 E-value=1.6 Score=40.63 Aligned_cols=36 Identities=22% Similarity=0.434 Sum_probs=31.6
Q ss_pred CcccEEEECCChHHHHHHHHhhcCCCC---eEEEEeccCC
Q 020815 89 ADTDVVVVGAGSAGLSCAYELSKNPNI---QIAIIEQSVS 125 (321)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~---~V~liEk~~~ 125 (321)
.+..|||.|+|.+|+.+|..|... |+ ++.++|+...
T Consensus 218 ~d~riV~~GAGaAGigia~ll~~~-G~~~~~i~l~D~~Gl 256 (487)
T 3nv9_A 218 HECRMVFIGAGSSNTTCLRLIVTA-GADPKKIVMFDSKGS 256 (487)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHT-TCCGGGEEEEETTEE
T ss_pred hhcEEEEECCCHHHHHHHHHHHHc-CCCcccEEEEecccc
Confidence 357899999999999999999888 87 8999998753
No 497
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=80.13 E-value=1.7 Score=39.19 Aligned_cols=33 Identities=18% Similarity=0.255 Sum_probs=28.4
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEecc
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS 123 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~ 123 (321)
.-.|+|+|+|..|+.++..+... |.+|+++++.
T Consensus 188 g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~ 220 (366)
T 1yqd_A 188 GKHIGIVGLGGLGHVAVKFAKAF-GSKVTVISTS 220 (366)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 34799999999999998887778 9999999875
No 498
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=80.00 E-value=1.5 Score=40.88 Aligned_cols=34 Identities=24% Similarity=0.320 Sum_probs=30.5
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
.-.|+|||.|..|..+|..|... |.+|++.|..+
T Consensus 247 GKTVgVIG~G~IGr~vA~~lraf-Ga~Viv~d~dp 280 (464)
T 3n58_A 247 GKVAVVCGYGDVGKGSAQSLAGA-GARVKVTEVDP 280 (464)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-CCEEEEEeCCc
Confidence 35799999999999999999888 99999998754
No 499
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=79.96 E-value=1.9 Score=36.48 Aligned_cols=32 Identities=22% Similarity=0.389 Sum_probs=29.3
Q ss_pred cEEEECCChHHHHHHHHhhcCCCC----eEEEEeccC
Q 020815 92 DVVVVGAGSAGLSCAYELSKNPNI----QIAIIEQSV 124 (321)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~----~V~liEk~~ 124 (321)
.|.|||+|..|...|..|.+. |. +|.+++++.
T Consensus 4 ~i~iIG~G~mG~~~a~~l~~~-g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 4 QIGFIGCGNMGMAMIGGMINK-NIVSSNQIICSDLNT 39 (247)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TSSCGGGEEEECSCH
T ss_pred eEEEECccHHHHHHHHHHHhC-CCCCCCeEEEEeCCH
Confidence 699999999999999999998 87 999999863
No 500
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=79.86 E-value=1.5 Score=40.67 Aligned_cols=34 Identities=24% Similarity=0.385 Sum_probs=30.9
Q ss_pred cccEEEECCChHHHHHHHHhhcCCCCeEEEEeccC
Q 020815 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (321)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~liEk~~ 124 (321)
...|+|||.|..|..+|..|... |.+|+++|+.+
T Consensus 211 GktVgIiG~G~IG~~vA~~Lka~-Ga~Viv~D~~p 244 (436)
T 3h9u_A 211 GKTACVCGYGDVGKGCAAALRGF-GARVVVTEVDP 244 (436)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC-CCEEEEECCCh
Confidence 45799999999999999999999 99999999854
Done!