Query 020816
Match_columns 321
No_of_seqs 155 out of 323
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 08:36:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020816.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020816hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kev_A Galieria sulfuraria DCU 100.0 3E-54 1E-58 389.7 13.0 176 6-188 3-196 (199)
2 3tdu_A DCN1-like protein 1; E2 100.0 4.6E-54 1.6E-58 388.7 13.4 174 8-187 2-194 (200)
3 4gba_A DCN1-like protein 3; E3 100.0 8.6E-53 3E-57 385.5 13.2 178 6-189 2-202 (221)
4 3bq3_A Defective in cullin ned 100.0 2.7E-51 9.3E-56 384.8 10.9 174 5-184 69-269 (270)
5 3akb_A Putative calcium bindin 62.4 50 0.0017 25.3 8.9 24 164-187 141-164 (166)
6 2bl0_B Myosin regulatory light 61.0 49 0.0017 24.8 8.4 23 161-183 118-140 (145)
7 1y1x_A Leishmania major homolo 60.2 68 0.0023 26.1 11.1 80 102-182 105-188 (191)
8 3bux_B E3 ubiquitin-protein li 59.6 16 0.00055 35.2 6.3 70 106-179 158-238 (329)
9 3fwb_A Cell division control p 58.8 57 0.002 24.9 8.6 79 105-183 74-160 (161)
10 2znd_A Programmed cell death p 54.1 65 0.0022 25.3 8.4 79 103-181 87-168 (172)
11 3sjs_A URE3-BP sequence specif 53.0 1E+02 0.0035 26.0 10.2 81 102-183 129-217 (220)
12 1alv_A Calpain, S-camld; calci 52.0 68 0.0023 25.3 8.2 100 68-169 45-156 (173)
13 1s1e_A KV channel interacting 50.1 97 0.0033 26.1 9.3 135 46-184 48-202 (224)
14 2ovk_C Myosin catalytic light 48.3 88 0.003 24.0 8.1 118 63-185 24-153 (159)
15 1s6c_A KV4 potassium channel-i 48.0 71 0.0024 25.2 7.7 11 172-182 157-167 (183)
16 3dd4_A KV channel-interacting 47.6 1.1E+02 0.0037 25.9 9.2 82 102-183 114-214 (229)
17 3ox6_A Calcium-binding protein 42.7 1E+02 0.0035 23.0 10.0 11 172-182 142-152 (153)
18 4ds7_A Calmodulin, CAM; protei 42.6 1E+02 0.0035 22.9 7.6 11 172-182 136-146 (147)
19 3j04_B Myosin regulatory light 40.7 44 0.0015 25.1 5.1 12 172-183 129-140 (143)
20 2jul_A Calsenilin; EF-hand, ca 39.4 1.5E+02 0.005 25.4 8.9 136 45-184 87-242 (256)
21 2jnf_A Troponin C; stretch act 39.4 1.2E+02 0.0042 22.9 8.3 11 172-182 144-154 (158)
22 3qrx_A Centrin; calcium-bindin 37.5 85 0.0029 24.2 6.5 13 172-184 154-166 (169)
23 2hpk_A Photoprotein berovin; s 37.0 82 0.0028 25.6 6.6 51 138-188 141-195 (208)
24 2i7a_A Calpain 13; calcium-dep 35.7 1.3E+02 0.0045 24.6 7.7 135 44-180 19-170 (174)
25 2f2o_A Calmodulin fused with c 35.3 57 0.0019 25.6 5.1 15 172-186 137-151 (179)
26 2sas_A Sarcoplasmic calcium-bi 35.3 1.5E+02 0.0053 22.8 10.7 98 91-188 61-172 (185)
27 1jba_A GCAP-2, protein (guanyl 35.0 1.8E+02 0.0061 23.5 9.0 11 172-182 165-175 (204)
28 1nya_A Calerythrin; EF-hand, m 33.5 94 0.0032 24.0 6.1 22 164-185 145-166 (176)
29 2boy_A 3-chlorocatechol 1,2-di 33.4 39 0.0013 31.2 4.3 49 126-184 13-61 (254)
30 2lvv_A Flagellar calcium-bindi 32.4 62 0.0021 27.3 5.2 123 64-186 65-201 (226)
31 2d8n_A Recoverin; structural g 32.1 2E+02 0.0068 23.2 10.6 82 103-184 84-186 (207)
32 1wdc_C Scallop myosin; calcium 31.3 1.7E+02 0.0058 22.2 8.0 22 164-185 131-152 (156)
33 1g8i_A Frequenin, neuronal cal 30.6 2E+02 0.0067 22.6 8.4 21 164-184 156-176 (190)
34 1ggw_A Protein (CDC4P); light 30.6 95 0.0033 23.2 5.6 11 172-182 128-138 (140)
35 1top_A Troponin C; contractIle 29.9 1.8E+02 0.0061 22.0 8.1 11 172-182 149-159 (162)
36 2y1n_A E3 ubiquitin-protein li 29.8 1.4E+02 0.0049 29.0 7.9 73 106-182 134-217 (389)
37 1dtl_A Cardiac troponin C; hel 27.9 1.7E+02 0.0057 22.2 6.6 11 172-182 148-158 (161)
38 1fpw_A Yeast frequenin, calciu 27.0 2.3E+02 0.0078 22.2 8.7 12 172-183 164-175 (190)
39 2ccm_A Calexcitin; EF hand, ca 26.2 2.4E+02 0.0082 22.2 8.0 52 136-187 120-175 (191)
40 1bjf_A Neurocalcin delta; calc 24.9 2.5E+02 0.0086 22.0 10.0 22 161-182 153-174 (193)
41 3dtp_E RLC, myosin regulatory 24.6 1.1E+02 0.0037 25.0 5.2 110 65-183 72-189 (196)
42 1juo_A Sorcin; calcium-binding 23.4 2.9E+02 0.0099 22.2 8.7 98 68-167 71-179 (198)
43 1jw2_A Hemolysin expression mo 23.3 61 0.0021 24.8 3.1 40 46-93 6-45 (72)
44 2mys_C Myosin; muscle protein, 23.0 2.3E+02 0.0079 20.9 10.6 11 172-182 137-147 (149)
45 3bow_A Calpain-2 catalytic sub 22.2 6.4E+02 0.022 25.7 11.5 119 67-187 572-701 (714)
46 1m45_A MLC1P, myosin light cha 21.8 2.2E+02 0.0075 21.2 6.2 23 161-183 125-147 (148)
47 4drw_A Protein S100-A10/annexi 21.8 29 0.00098 28.1 1.0 53 44-98 29-84 (121)
48 2ehb_A Calcineurin B-like prot 20.1 3.4E+02 0.012 21.7 7.8 22 164-185 164-185 (207)
49 2mys_B Myosin; muscle protein, 20.0 3E+02 0.01 21.0 8.6 23 162-184 138-160 (166)
No 1
>3kev_A Galieria sulfuraria DCUN1 domain-containing prote; cullin, neddylation, DCN-1, center for eukaryotic structural genomics, PSI; HET: CSO MSE; 1.30A {Galdieria sulphuraria}
Probab=100.00 E-value=3e-54 Score=389.67 Aligned_cols=176 Identities=31% Similarity=0.590 Sum_probs=154.9
Q ss_pred CCChhHHHHHHHHHhccccc------ccccccccCccCCCCC-----------CcccccHHHHHHHHhhhhhhhhccccc
Q 020816 6 LSNPLDIFEIYRRFCEIKSQ------NADVCIEDSYREDKES-----------PKAKFSREALAELFNLVELTVHIRIFV 68 (321)
Q Consensus 6 ~~~~~dL~~lF~rY~D~~s~------i~~lC~dLgv~~d~dV-----------m~a~iSre~~t~L~~~~dg~~~lgc~t 68 (321)
+++.++|++||++|+|++++ ++++|+||||+|+..+ ..++|||++| ++|+..+||+|
T Consensus 3 ~~~~~~l~~lF~~Y~d~~~~~I~~dG~~~~~~DLgv~ped~~~LvLaw~l~a~~~g~ftr~ef------~~G~~~l~~ds 76 (199)
T 3kev_A 3 RADKKAILELFQTYKEPLGNYIGAEGLQRLFEDIQVDPSDVVTLVLAWKLKASSTCEFSEKEF------VEGLANLQVDS 76 (199)
T ss_dssp -CCHHHHHHHHHHHCCTTSSEECHHHHHHHHHHTTCCTTSHHHHHHHHHTTCCSTTCEEHHHH------HHHHHHTTCCS
T ss_pred ccCHHHHHHHHHHhcCCCcCccCHHHHHHHHHHcCCChhhHHHHHHHHHcCCCccCcccHHHH------HHHHHHhCCCC
Confidence 46788999999999998653 8999999999996433 3458999988 88999999999
Q ss_pred hHHHHHHHHhcc-ccCChhhhhhhhhhhhhcccccCcccccHHHHHHHHHHhhcCccccHHHHHHHHHhhcCCccCHHhH
Q 020816 69 FDELFKLMSQLD-LMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQWCDFVERNQRHNISEDTW 147 (321)
Q Consensus 69 iDsLkkLl~~L~-l~~D~~~Fk~fY~FtF~fare~gQKsL~letAIa~W~LLL~~~f~~Ld~W~~FL~~~~~k~ISkDtW 147 (321)
+++|++.++.|. .++|+.+|++||+|||+|+|++|||+|++||||+||+|||+++||++++|++||++++ |+||||||
T Consensus 77 i~~lk~~l~~l~~~l~d~~~Fk~~Y~ftF~~~re~gqk~L~~e~Ai~~W~lll~~~~~~l~~W~~FL~~~~-k~IskD~W 155 (199)
T 3kev_A 77 LEKLKRKLSSLRKEIEDPSKFRAFYQFVFQYSKEPSQRSLPAETAMALWDVLLRGRFSLLDSWLEFLKNNT-HSISRDTW 155 (199)
T ss_dssp HHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHSCTTCSSBCHHHHHHHHHHHHTTTCTTHHHHHHHGGGCC-SCBCHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHcCcCcCCCCHHHHHHHHHHHhCCccHHHHHHHHHHHhcC-CCcCHHHH
Confidence 999999999997 4689999999999999999999999999999999999999999999999999999888 99999999
Q ss_pred HHHHHHHhhhcccCCCCCCCCCCchHHHHHHHHHHHhhCCC
Q 020816 148 QQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYRVSGSK 188 (321)
Q Consensus 148 ~q~l~F~~~v~~dls~YDe~gAWP~LIDEFVE~~r~~~gs~ 188 (321)
+|||+|+++|++++++|||+||||+||||||||+|++.+.+
T Consensus 156 ~~~l~F~~~i~~dls~YDe~gAWP~liDeFVe~~r~~~~~~ 196 (199)
T 3kev_A 156 NLLYDFSQLSEKDLSDYDENGAWPVLIDDFVKWLKHEQPNK 196 (199)
T ss_dssp HHHHHHHTC--CTTTTCC---CCCHHHHHHHHHHTTC----
T ss_pred HHHHHHHHHhcccccCCCCCCCchHHHHHHHHHHHHcCCCc
Confidence 99999999999999999999999999999999999876654
No 2
>3tdu_A DCN1-like protein 1; E2:E3, ligase-protein binding complex; 1.50A {Homo sapiens} PDB: 3tdz_A 4gao_A*
Probab=100.00 E-value=4.6e-54 Score=388.70 Aligned_cols=174 Identities=28% Similarity=0.601 Sum_probs=160.4
Q ss_pred ChhHHHHHHHHHhccccc-------ccccccccCccCCCCC-----------CcccccHHHHHHHHhhhhhhhhccccch
Q 020816 8 NPLDIFEIYRRFCEIKSQ-------NADVCIEDSYREDKES-----------PKAKFSREALAELFNLVELTVHIRIFVF 69 (321)
Q Consensus 8 ~~~dL~~lF~rY~D~~s~-------i~~lC~dLgv~~d~dV-----------m~a~iSre~~t~L~~~~dg~~~lgc~ti 69 (321)
+.++|++||++|+|+++. ++++|+||||+|++.+ ..++|||++| ++|+..+||+|+
T Consensus 2 ~~~~l~~lF~~Y~d~~~~d~I~~dG~~~~~~DLgv~ped~~~Lvlaw~l~a~~~g~ftr~ef------~~G~~~l~~dsi 75 (200)
T 3tdu_A 2 SRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEF------MDGMTELGCDSI 75 (200)
T ss_dssp CHHHHHHHHHHHEETTEEEEECHHHHHHHHHHHTCCTTSHHHHHHHHHTTCSSTTCEEHHHH------HHHHHHHTCSSH
T ss_pred CHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCChhhHHHHHHHHHcCCCccCccCHHHH------HHHHHHHccccH
Confidence 357899999999998642 9999999999996543 3458999988 889999999999
Q ss_pred HHHHHHHHhcc-ccCChhhhhhhhhhhhhcccccCcccccHHHHHHHHHHhhcCccccHHHHHHHHHhhcCCccCHHhHH
Q 020816 70 DELFKLMSQLD-LMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRFRLLNQWCDFVERNQRHNISEDTWQ 148 (321)
Q Consensus 70 DsLkkLl~~L~-l~~D~~~Fk~fY~FtF~fare~gQKsL~letAIa~W~LLL~~~f~~Ld~W~~FL~~~~~k~ISkDtW~ 148 (321)
++|++.+++|. .++|+.+|++||+|||+|+|++|||+|++|+||+||+|||+++|++|++|++||+++++|+||||||+
T Consensus 76 ~~lk~~l~~l~~~l~d~~~Fk~~Y~ftF~~~r~~gqk~L~~e~Ai~~W~lll~~~~~~l~~W~~FL~~~~~k~IskD~W~ 155 (200)
T 3tdu_A 76 EKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLVLNGRFKFLDLWNKFLLEHHKRSIPKDTWN 155 (200)
T ss_dssp HHHHHTHHHHHHHTTSHHHHHHHHHHHHHHHSCTTCSSEEHHHHHHHHHHHSTTSCTTHHHHHHHHHHTTCCEECHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHcCcCcCcCCHHHHHHHHHHHcCCCchHHHHHHHHHHhcCCcCcCHhHHH
Confidence 99999999997 45799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcccCCCCCCCCCCchHHHHHHHHHHHhhCC
Q 020816 149 QVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYRVSGS 187 (321)
Q Consensus 149 q~l~F~~~v~~dls~YDe~gAWP~LIDEFVE~~r~~~gs 187 (321)
|||+|+++|++||++|||+||||+||||||||+|++...
T Consensus 156 ~~l~F~~~i~~dls~YDe~gAWP~liDeFVew~r~~~~~ 194 (200)
T 3tdu_A 156 LLLDFSTMIADDMSNYDEEGAWPVLIDDFVEFARPQIAG 194 (200)
T ss_dssp HHHHHHHHCCTTCTTCCTTSSCCHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHhcccccCCCCCCCchHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999988653
No 3
>4gba_A DCN1-like protein 3; E3 ligase, ligase-peptide complex; HET: AME; 2.40A {Homo sapiens}
Probab=100.00 E-value=8.6e-53 Score=385.47 Aligned_cols=178 Identities=24% Similarity=0.447 Sum_probs=159.4
Q ss_pred CCChhHHHHHHHHHhccccc------ccccccccCccCCCCC-----------CcccccHHHHHHHHhhhhhhhhccccc
Q 020816 6 LSNPLDIFEIYRRFCEIKSQ------NADVCIEDSYREDKES-----------PKAKFSREALAELFNLVELTVHIRIFV 68 (321)
Q Consensus 6 ~~~~~dL~~lF~rY~D~~s~------i~~lC~dLgv~~d~dV-----------m~a~iSre~~t~L~~~~dg~~~lgc~t 68 (321)
+++..+|++||++|+|++.+ +++||+||||+|+..+ ..++|||++| ++|+..+||+|
T Consensus 2 ~~~~~~l~~lF~~Y~d~~~d~I~~eGi~~l~~DLgv~ped~~~LvLAw~l~A~~mg~ftr~eF------~~G~~~l~~ds 75 (221)
T 4gba_A 2 SSSLQRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEF------FDGCKAISADS 75 (221)
T ss_dssp ----CHHHHHHHTTSCSSSSEECHHHHHHHHHHTTCCTTSHHHHHHHHHTTCCSTTCEEHHHH------HHHHHHHTCSS
T ss_pred CCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHcCCChhhHHHHHHHHHhCCCccCcCcHHHH------HHHHHHhCcCC
Confidence 45667899999999997543 9999999999996433 2458999988 88999999999
Q ss_pred hHHHHHHHHhcc-ccCChhhhhhhhhhhhhcccc--cCcccccHHHHHHHHHHhhcC-ccccHHHHHHHHHhh--cCCcc
Q 020816 69 FDELFKLMSQLD-LMGDFSEFSRFYDFVFFMCRE--NGQKNITVSRAVTAWRLVLAG-RFRLLNQWCDFVERN--QRHNI 142 (321)
Q Consensus 69 iDsLkkLl~~L~-l~~D~~~Fk~fY~FtF~fare--~gQKsL~letAIa~W~LLL~~-~f~~Ld~W~~FL~~~--~~k~I 142 (321)
+++|++.++.|. .++|+.+||+||+|||.|+|+ +|||+|++|+||+||+|||++ +||+|++|++||+++ .+|+|
T Consensus 76 i~~lk~~l~~L~~~l~d~~~Fk~~Y~ftF~~~~~~e~gqk~L~le~Ai~~W~Lll~~~~~~~l~~W~~FL~~~~~~~k~I 155 (221)
T 4gba_A 76 IDGICARFPSLLTEAKQEDKFKDLYRFTFQFGLDSEEGQRSLHREIAIALWKLVFTQNNPPVLDQWLNFLTENPSGIKGI 155 (221)
T ss_dssp HHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHSCTTTTCSSEEHHHHHHHHHHHTTTCCCTTHHHHHHHHHHCTTCCCEE
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhcCCccccCCCHHHHHHHHHHHcCCCCcHHHHHHHHHHHhcCCCCCCc
Confidence 999999999997 348999999999999999999 999999999999999999998 899999999999987 37999
Q ss_pred CHHhHHHHHHHHhhhcccCCCCCCCCCCchHHHHHHHHHHHhhCCCC
Q 020816 143 SEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYRVSGSKE 189 (321)
Q Consensus 143 SkDtW~q~l~F~~~v~~dls~YDe~gAWP~LIDEFVE~~r~~~gs~~ 189 (321)
|||||+|||+|+++|++||++|||+||||+||||||||+|++...++
T Consensus 156 skDtW~~~l~F~~~i~~dls~YDe~gAWP~liDeFVEw~ke~~~~~~ 202 (221)
T 4gba_A 156 SRDTWNMFLNFTQVIGPDLSNYSEDEAWPSLFDTFVEWEMERRKREG 202 (221)
T ss_dssp CHHHHHHHHHHHHHSCSSCTTCCTTSCCCHHHHHHHHHHHHHHHCC-
T ss_pred CHHHHHHHHHHHHHhcccccCCCCCCCchHHHHHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999999999999999887653
No 4
>3bq3_A Defective in cullin neddylation protein 1; ubiquitin, ubiquitination,SCF,cullin, E3 E2, cell cycle, protein degradation, ligase; 1.90A {Saccharomyces cerevisiae} PDB: 2is9_A* 3o2p_A 3o6b_A 3tdi_B 2l4e_A 2l4f_A
Probab=100.00 E-value=2.7e-51 Score=384.83 Aligned_cols=174 Identities=21% Similarity=0.466 Sum_probs=160.4
Q ss_pred CCCChhHHHHHHHHHhccc----ccccccccccCccCCCCC-----------Cc-ccccHHHHHHHHhhhhhhhhccccc
Q 020816 5 SLSNPLDIFEIYRRFCEIK----SQNADVCIEDSYREDKES-----------PK-AKFSREALAELFNLVELTVHIRIFV 68 (321)
Q Consensus 5 ~~~~~~dL~~lF~rY~D~~----s~i~~lC~dLgv~~d~dV-----------m~-a~iSre~~t~L~~~~dg~~~lgc~t 68 (321)
+.++..+|++||++|++++ .++++||+||||+|+..+ .. ++|||++| ++|+..+||++
T Consensus 69 ~~~~~~~l~~lF~~Y~~~d~I~~dG~~~~~~DLgv~ped~~~Lvla~~l~a~~~~g~ftr~ef------~~G~~~l~~ds 142 (270)
T 3bq3_A 69 PPVYPKELTQVFEHYINNNLFDIDSLVKFIEELGYNLEDLATLCLAHLLGYKKLEEPLKREDF------LSTWFMQGCST 142 (270)
T ss_dssp CCSSCHHHHHHHHHHCBTTBCCHHHHHHHHHHHTCCTTCHHHHHHHHHTTCSCTTSCCCHHHH------HHHHHHTTCCS
T ss_pred ccccHHHHHHHHHHhcCCCccCHhhHHHHHHHcCCChhhHHHHHHHHHcCCCccCceeeHHHH------HHHHHHhCCCC
Confidence 3567788999999999643 239999999999996432 24 78999988 89999999999
Q ss_pred hHHHHHHHHhcc--ccCChhhhhhhhhhhhhcccccCcccccHHHHHHHHHHhhcCcc------ccHHHHHHHHHhhcCC
Q 020816 69 FDELFKLMSQLD--LMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRF------RLLNQWCDFVERNQRH 140 (321)
Q Consensus 69 iDsLkkLl~~L~--l~~D~~~Fk~fY~FtF~fare~gQKsL~letAIa~W~LLL~~~f------~~Ld~W~~FL~~~~~k 140 (321)
+++|++.++.|. +..|+.+|++||+|||+|+|++|||+|++|+||+||+|||+++| ++|++|++||+++++|
T Consensus 143 i~~lk~~l~~l~~~~~~d~~~Fk~~Y~f~F~~~r~~gqk~l~~d~Ai~~W~lll~~~~p~~~~~~~l~~W~~FL~~~~~k 222 (270)
T 3bq3_A 143 ISDMQECIKTLDVKLHEDLQYFTQIYNYAFNLILDPNRKDIDTDEGIQYWKLFFQPEYPVRMEPDLLEAWFRFLRDEGKT 222 (270)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCTTCSEEEHHHHHHHHHHHTSTTSSCCCCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHhcCcCcCcCcHHHHHHHHHHHcCCcccccccchHHHHHHHHHHhcCCC
Confidence 999999999997 67899999999999999999999999999999999999999999 8999999999999999
Q ss_pred ccCHHhHHHHHHHHhhh---cccCCCCCCCCCCchHHHHHHHHHHHh
Q 020816 141 NISEDTWQQVLAFSRCV---HENLEGYDPEGAWPVLIDDFVEHMYRV 184 (321)
Q Consensus 141 ~ISkDtW~q~l~F~~~v---~~dls~YDe~gAWP~LIDEFVE~~r~~ 184 (321)
+||||||+|||+|+++| +++|++|||+||||+||||||||+|++
T Consensus 223 ~IskDtW~~~l~F~~~~~~~~~dls~YDe~~AWP~liDeFVe~~~~~ 269 (270)
T 3bq3_A 223 TISKDTWRMLLLFFKRYPTIQKIISDYDETAAWPFIIDEFYECLQDQ 269 (270)
T ss_dssp EEEHHHHHHHHHHHHHCCSHHHHHHHCCTTSSCCHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHHHhccCCCccccCCccCccHHHHHHHHHHHhcc
Confidence 99999999999999999 899999999999999999999999974
No 5
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A
Probab=62.42 E-value=50 Score=25.26 Aligned_cols=24 Identities=21% Similarity=0.133 Sum_probs=15.7
Q ss_pred CCCCCCCchHHHHHHHHHHHhhCC
Q 020816 164 YDPEGAWPVLIDDFVEHMYRVSGS 187 (321)
Q Consensus 164 YDe~gAWP~LIDEFVE~~r~~~gs 187 (321)
+|.++-==+=++||+.+++...++
T Consensus 141 ~D~d~dg~i~~~ef~~~~~~~~~~ 164 (166)
T 3akb_A 141 LDTDGDGKVGETEIVPAFARYFTV 164 (166)
T ss_dssp HCTTCSSBCCHHHHHHHHHHHTSC
T ss_pred hCCCCCCcCcHHHHHHHHHHHhcC
Confidence 343333336689999999877654
No 6
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=61.03 E-value=49 Score=24.77 Aligned_cols=23 Identities=13% Similarity=0.284 Sum_probs=15.0
Q ss_pred CCCCCCCCCCchHHHHHHHHHHH
Q 020816 161 LEGYDPEGAWPVLIDDFVEHMYR 183 (321)
Q Consensus 161 ls~YDe~gAWP~LIDEFVE~~r~ 183 (321)
+..+|.++-=-+=++||+.++..
T Consensus 118 ~~~~d~~~dg~i~~~eF~~~~~~ 140 (145)
T 2bl0_B 118 MKEVSVSGDGAINYESFVDMLVT 140 (145)
T ss_dssp HTTCCCCTTSEEEHHHHHHHHHH
T ss_pred HHHcCCCCCCcEeHHHHHHHHHh
Confidence 34555544334668999998874
No 7
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=60.22 E-value=68 Score=26.06 Aligned_cols=80 Identities=15% Similarity=0.176 Sum_probs=41.8
Q ss_pred cCcccccHHHHHHHHHHhhcCc--cccHHHHHHHHHhhcCCccCHHhHHHHHHHHhhhcccCCCCCCCCC--CchHHHHH
Q 020816 102 NGQKNITVSRAVTAWRLVLAGR--FRLLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGA--WPVLIDDF 177 (321)
Q Consensus 102 ~gQKsL~letAIa~W~LLL~~~--f~~Ld~W~~FL~~~~~k~ISkDtW~q~l~F~~~v~~dls~YDe~gA--WP~LIDEF 177 (321)
.+.-.|+.+.-..+.+.+ +.. -..++..+.-+..+....|+.+.+..++.-...+..-+..||.++- =..=++||
T Consensus 105 d~~G~i~~~e~~~~l~~~-g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~dG~i~~~~~eF 183 (191)
T 1y1x_A 105 SGDGRLDSNEVRAALLSS-GYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIFVCRVRNVFAFYDRERTGQVTFTFDTF 183 (191)
T ss_dssp TSSSCBCHHHHHHHHHTT-SCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEEEHHHH
T ss_pred CCCCeEcHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHHHHHHHHHHHhCcCCCceEEeeHHHH
Confidence 344456665544444322 111 1234444554444455668888887777655555555566665432 22336777
Q ss_pred HHHHH
Q 020816 178 VEHMY 182 (321)
Q Consensus 178 VE~~r 182 (321)
+..+.
T Consensus 184 ~~~~~ 188 (191)
T 1y1x_A 184 IGGSV 188 (191)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76654
No 8
>3bux_B E3 ubiquitin-protein ligase CBL; TKB, signal transduction, proto-oncogene, complex, ATP-binding, glycoprotein, kinase, membrane, nucleotide-binding; HET: PTR; 1.35A {Homo sapiens} SCOP: a.39.1.7 a.48.1.1 d.93.1.1 PDB: 1yvh_A* 3bun_B* 3buo_B* 3bum_B* 3buw_B* 3ob1_B* 3ob2_B* 3plf_B* 2cbl_A* 1b47_A 3pfv_A*
Probab=59.62 E-value=16 Score=35.22 Aligned_cols=70 Identities=20% Similarity=0.318 Sum_probs=50.6
Q ss_pred cccHHHHHHHHHHhhcCccccHHHHHHHHHhhcC-CccCHHhHHHHHHHHhhhcccCCCCCC----------CCCCchHH
Q 020816 106 NITVSRAVTAWRLVLAGRFRLLNQWCDFVERNQR-HNISEDTWQQVLAFSRCVHENLEGYDP----------EGAWPVLI 174 (321)
Q Consensus 106 sL~letAIa~W~LLL~~~f~~Ld~W~~FL~~~~~-k~ISkDtW~q~l~F~~~v~~dls~YDe----------~gAWP~LI 174 (321)
.|....|.++|+--|+.+-- -.|-.|...-.. .+|.-..|.+-|.+ +++...++|-. -|.||+++
T Consensus 158 rItK~~A~eFW~~~FG~r~i--VpW~~F~~~L~~~~~i~sg~~~laLK~--tiDlT~~d~VSifeFdvFtr~FqPw~~ll 233 (329)
T 3bux_B 158 RITKADAAEFWRKAFGEKTI--VPWKSFRQALHEVHPISSGLEAMALKS--TIDLTCNDYISVFEFDIFTRLFQPWSSLL 233 (329)
T ss_dssp CCSSHHHHHHHHHHHTTCSE--EEHHHHHHHHHHHSCCCCHHHHHHHHH--HHCTTCSSEEEHHHHHHHHHHTCCGGGHH
T ss_pred eecChHHHHHHHHhCCCCcC--CcHHHHHHHHHHhCCCCCCchhhhhhh--eeCCCcCCceeeeecccHHHhhCchHHHH
Confidence 56778999999999998732 468899876543 67777888888877 44444444421 48999999
Q ss_pred HHHHH
Q 020816 175 DDFVE 179 (321)
Q Consensus 175 DEFVE 179 (321)
..+-.
T Consensus 234 ~nw~~ 238 (329)
T 3bux_B 234 RNWNS 238 (329)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87744
No 9
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=58.83 E-value=57 Score=24.86 Aligned_cols=79 Identities=10% Similarity=0.109 Sum_probs=36.5
Q ss_pred ccccHHHHHHHHHHhhcCc--cccHHHHHHHHHhhcCCccCHHhHHHHHHHHh------hhcccCCCCCCCCCCchHHHH
Q 020816 105 KNITVSRAVTAWRLVLAGR--FRLLNQWCDFVERNQRHNISEDTWQQVLAFSR------CVHENLEGYDPEGAWPVLIDD 176 (321)
Q Consensus 105 KsL~letAIa~W~LLL~~~--f~~Ld~W~~FL~~~~~k~ISkDtW~q~l~F~~------~v~~dls~YDe~gAWP~LIDE 176 (321)
..|+.+.-+.++...+... ...+...+..+...+...|+++....++.-+. .+..-+..+|.++-=-+=++|
T Consensus 74 g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~e 153 (161)
T 3fwb_A 74 HLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENE 153 (161)
T ss_dssp SCEEHHHHHHHHHHHHHTCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCSSSSSSEEHHH
T ss_pred CeEeHHHHHHHHHHHHhcCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHH
Confidence 3455555555554433322 12233333333334445566666666554221 011224455543221245789
Q ss_pred HHHHHHH
Q 020816 177 FVEHMYR 183 (321)
Q Consensus 177 FVE~~r~ 183 (321)
|+.+++.
T Consensus 154 F~~~~~~ 160 (161)
T 3fwb_A 154 FIAICTD 160 (161)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9988764
No 10
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=54.09 E-value=65 Score=25.31 Aligned_cols=79 Identities=11% Similarity=0.040 Sum_probs=36.9
Q ss_pred CcccccHHHHHHHHHHhhc-CccccHHHHHHHHHhhcCCccCHHhHHHHHHHHhhhcccCCCCCCCCCCchH--HHHHHH
Q 020816 103 GQKNITVSRAVTAWRLVLA-GRFRLLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVL--IDDFVE 179 (321)
Q Consensus 103 gQKsL~letAIa~W~LLL~-~~f~~Ld~W~~FL~~~~~k~ISkDtW~q~l~F~~~v~~dls~YDe~gAWP~L--IDEFVE 179 (321)
+.-.|+.+.-..+.+.+-. ..-..+...+.-+.......|+.+.+..++.-...+..-+..||.++-=-.- +.+|+.
T Consensus 87 ~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~dG~i~~~~~ef~~ 166 (172)
T 2znd_A 87 NSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLS 166 (172)
T ss_dssp CSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHCTTSSSCCCCCHHHHHH
T ss_pred CCCccCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEeeeHHHHHH
Confidence 3344555544444433210 0112234444444444445677777776665544444555555554332111 455555
Q ss_pred HH
Q 020816 180 HM 181 (321)
Q Consensus 180 ~~ 181 (321)
.+
T Consensus 167 ~~ 168 (172)
T 2znd_A 167 MV 168 (172)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 11
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=52.98 E-value=1e+02 Score=25.95 Aligned_cols=81 Identities=9% Similarity=0.007 Sum_probs=49.1
Q ss_pred cCcccccHHHHHHHHHHhhcC-ccccHHHHHHHHHhhcCCccCHHhHHHHHHHHhhhcccCCCC-CCCCCC------chH
Q 020816 102 NGQKNITVSRAVTAWRLVLAG-RFRLLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGY-DPEGAW------PVL 173 (321)
Q Consensus 102 ~gQKsL~letAIa~W~LLL~~-~f~~Ld~W~~FL~~~~~k~ISkDtW~q~l~F~~~v~~dls~Y-De~gAW------P~L 173 (321)
.|.-.|+.+.-..+.+-+-.. .-..++..+.-+. +....|+.+.+..++.+...+..-+..| |.++.= ++=
T Consensus 129 d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~l~~~~~~F~~~~D~~~~G~i~~~~~i~ 207 (220)
T 3sjs_A 129 ARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFA-RGMAFCDLNCWIAICAFAAQTRSAYQMIFMNPYYGPMKPFNPME 207 (220)
T ss_dssp SSTTEECHHHHHHHHHHHTCCCCHHHHHHHHHHHC---CCSEEHHHHHHHHHHHHHHHHHHHHHHTSGGGCSCCCCCHHH
T ss_pred CCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHHHHHHHHHHHHhcccCCCCCccccccee
Confidence 445567776655555533111 1123555666655 5556799999999888888777777777 654333 455
Q ss_pred HHHHHHHHHH
Q 020816 174 IDDFVEHMYR 183 (321)
Q Consensus 174 IDEFVE~~r~ 183 (321)
.+||+.++..
T Consensus 208 ~~ef~~~~~~ 217 (220)
T 3sjs_A 208 FGKFLDVVTS 217 (220)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6777776653
No 12
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=52.01 E-value=68 Score=25.30 Aligned_cols=100 Identities=14% Similarity=0.163 Sum_probs=44.9
Q ss_pred chHHHHHHHHhcccc----CChhhhhhhhh------hhhhcccccCcccccHHHHHHHHHHhhcCc--cccHHHHHHHHH
Q 020816 68 VFDELFKLMSQLDLM----GDFSEFSRFYD------FVFFMCRENGQKNITVSRAVTAWRLVLAGR--FRLLNQWCDFVE 135 (321)
Q Consensus 68 tiDsLkkLl~~L~l~----~D~~~Fk~fY~------FtF~fare~gQKsL~letAIa~W~LLL~~~--f~~Ld~W~~FL~ 135 (321)
+.+.++.++..++.. .+...|..++. -+|...-..+.-.|+.+.-..+.+.+ +.. -..++.++.-+.
T Consensus 45 ~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~~~~d 123 (173)
T 1alv_A 45 GIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQAIYKQFDVDRSGTIGSSELPGAFEAA-GFHLNEHLYSMIIRRYS 123 (173)
T ss_dssp CHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHHHCTTCCSSBCTTTHHHHHHHH-TCCCCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHcCCCCCccCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHc-CCCCCHHHHHHHHHHhc
Confidence 345666666665422 12344444432 23433322333445554444443332 111 122333333333
Q ss_pred hhcCCccCHHhHHHHHHHHhhhcccCCCCCCCCC
Q 020816 136 RNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGA 169 (321)
Q Consensus 136 ~~~~k~ISkDtW~q~l~F~~~v~~dls~YDe~gA 169 (321)
.....|+.+.+..++.-...+..-+..||.++-
T Consensus 124 -d~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~~ 156 (173)
T 1alv_A 124 -DEGGNMDFDNFISCLVRLDAMFRAFKSLDKDGT 156 (173)
T ss_dssp -CSSSCBCHHHHHHHHHHHHHHHHHHHHHSSSCC
T ss_pred -CCCCcCcHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 334557777776665544444444555555443
No 13
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=50.06 E-value=97 Score=26.13 Aligned_cols=135 Identities=13% Similarity=0.152 Sum_probs=66.3
Q ss_pred ccHHHHHHHHhhhhhhhhccccchHHHHHHHHhcccc-CChhhhhhhhhhhhhcccccCcccccHHHHHHHHHHhhcCc-
Q 020816 46 FSREALAELFNLVELTVHIRIFVFDELFKLMSQLDLM-GDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGR- 123 (321)
Q Consensus 46 iSre~~t~L~~~~dg~~~lgc~tiDsLkkLl~~L~l~-~D~~~Fk~fY~FtF~fare~gQKsL~letAIa~W~LLL~~~- 123 (321)
++++++.++....+.....|.-+.++++.++..+... ......+.+++ ..-..+.-.|+.+.-+.++..+..+.
T Consensus 48 ~s~~ei~~l~~~Fd~~d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~----~~D~d~~G~I~~~Ef~~~l~~~~~~~~ 123 (224)
T 1s1e_A 48 FTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFN----AFDTTQTGSVKFEDFVTALSILLRGTV 123 (224)
T ss_dssp CCHHHHHHHHHHHHHHCTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHH----HHCTTCSSCBCHHHHHHHHHHHHHCCH
T ss_pred CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHH----HhcCCCCCcEeHHHHHHHHHHHccCCH
Confidence 4445444444333322134555666677666665421 22233333322 22223444577766666665544321
Q ss_pred cccHHHHHHHHHhhcCCccCHHhHHHHHHHH------------------hhhcccCCCCCCCCCCchHHHHHHHHHHHh
Q 020816 124 FRLLNQWCDFVERNQRHNISEDTWQQVLAFS------------------RCVHENLEGYDPEGAWPVLIDDFVEHMYRV 184 (321)
Q Consensus 124 f~~Ld~W~~FL~~~~~k~ISkDtW~q~l~F~------------------~~v~~dls~YDe~gAWP~LIDEFVE~~r~~ 184 (321)
-..+...+..+.......|+.+.+..++.-. ..+..-+..+|.++-==+=++||+.+++..
T Consensus 124 ~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~~ 202 (224)
T 1s1e_A 124 HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQED 202 (224)
T ss_dssp HHHHHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGGCSSSHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCCCHhHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhC
Confidence 1223333444444445668888887776432 112222444554433335678999888743
No 14
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=48.29 E-value=88 Score=24.02 Aligned_cols=118 Identities=8% Similarity=0.023 Sum_probs=59.1
Q ss_pred hccccchHHHHHHHHhccccCChhhhhhhhhhhhhcccccCcccccHHHHHHHHHHhhcCc----cccHHHHHHHHHhhc
Q 020816 63 HIRIFVFDELFKLMSQLDLMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGR----FRLLNQWCDFVERNQ 138 (321)
Q Consensus 63 ~lgc~tiDsLkkLl~~L~l~~D~~~Fk~fY~FtF~fare~gQKsL~letAIa~W~LLL~~~----f~~Ld~W~~FL~~~~ 138 (321)
..|.-+.+++++++..+...........++.-. +.+...|+.+.-+.++..+.... ...+..-+..+-..+
T Consensus 24 ~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~-----d~~~g~i~~~eF~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~ 98 (159)
T 2ovk_C 24 RDGDVDAAKVGDLLRCLGMNPTEAQVHQHGGTK-----KMGEKAYKLEEILPIYEEMSSKDTGTAADEFMEAFKTFDREG 98 (159)
T ss_dssp SSSEEEGGGHHHHHHHTTCCCCHHHHHHTTCCS-----STTSCEEEHHHHHHHHHHHTTCSTTCCHHHHHHHHHHTCTTS
T ss_pred CCCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHh-----cCCCCeEcHHHHHHHHHHHhhccCCCcHHHHHHHHHHHCCCC
Confidence 345556777777777766433344444443322 22335677766666654322211 111222222223334
Q ss_pred CCccCHHhHHHHHHHHh------hhcccCC--CCCCCCCCchHHHHHHHHHHHhh
Q 020816 139 RHNISEDTWQQVLAFSR------CVHENLE--GYDPEGAWPVLIDDFVEHMYRVS 185 (321)
Q Consensus 139 ~k~ISkDtW~q~l~F~~------~v~~dls--~YDe~gAWP~LIDEFVE~~r~~~ 185 (321)
...|+++....++.-+. .+..-+. .+|.++-==+=++||+.++....
T Consensus 99 ~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~ 153 (159)
T 2ovk_C 99 QGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMAGP 153 (159)
T ss_dssp SSEECHHHHHHHHHHSSSCCCHHHHHHHHHHTTCCCCTTCCEEHHHHHHHHHHCS
T ss_pred CCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCCcEeHHHHHHHHhcCC
Confidence 45577776666654221 1112245 55654443456899999988653
No 15
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=48.02 E-value=71 Score=25.22 Aligned_cols=11 Identities=36% Similarity=0.621 Sum_probs=7.8
Q ss_pred hHHHHHHHHHH
Q 020816 172 VLIDDFVEHMY 182 (321)
Q Consensus 172 ~LIDEFVE~~r 182 (321)
+=++||+.+++
T Consensus 157 i~~~Ef~~~~~ 167 (183)
T 1s6c_A 157 VTLDEFLESXQ 167 (183)
T ss_dssp ECHHHHHHHTT
T ss_pred EeHHHHHHHHh
Confidence 55678887765
No 16
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=47.63 E-value=1.1e+02 Score=25.89 Aligned_cols=82 Identities=16% Similarity=0.238 Sum_probs=46.2
Q ss_pred cCcccccHHHHHHHHHHhhcCcc-ccHHHHHHHHHhhcCCccCHHhHHHHHHHHh------------------hhcccCC
Q 020816 102 NGQKNITVSRAVTAWRLVLAGRF-RLLNQWCDFVERNQRHNISEDTWQQVLAFSR------------------CVHENLE 162 (321)
Q Consensus 102 ~gQKsL~letAIa~W~LLL~~~f-~~Ld~W~~FL~~~~~k~ISkDtW~q~l~F~~------------------~v~~dls 162 (321)
.+...|+.+.-+.++..+..+.. ..+..-++.+...+...|+++....++.-+. .+..-+.
T Consensus 114 d~~G~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 193 (229)
T 3dd4_A 114 DHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQ 193 (229)
T ss_dssp SCCSSCCHHHHHHHHHHHHHSCHHHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC-----------CCTHHHHHHH
T ss_pred CCCCeEeHHHHHHHHHHHcCCChHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHH
Confidence 45566777777777666554321 2233334444444556788888887775431 1112244
Q ss_pred CCCCCCCCchHHHHHHHHHHH
Q 020816 163 GYDPEGAWPVLIDDFVEHMYR 183 (321)
Q Consensus 163 ~YDe~gAWP~LIDEFVE~~r~ 183 (321)
.+|.++-==.=++||+++++.
T Consensus 194 ~~D~d~dG~Is~~EF~~~~~~ 214 (229)
T 3dd4_A 194 KMDKNKDGVVTIDEFIESCQK 214 (229)
T ss_dssp HHCSSCSSBCCHHHHHHHHHT
T ss_pred HhcCCCCCcEeHHHHHHHHHh
Confidence 455444333557899988874
No 17
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=42.69 E-value=1e+02 Score=22.97 Aligned_cols=11 Identities=36% Similarity=0.537 Sum_probs=7.2
Q ss_pred hHHHHHHHHHH
Q 020816 172 VLIDDFVEHMY 182 (321)
Q Consensus 172 ~LIDEFVE~~r 182 (321)
+=++||+.+++
T Consensus 142 i~~~eF~~~~~ 152 (153)
T 3ox6_A 142 VDFEEFVRMMS 152 (153)
T ss_dssp BCHHHHHHHTC
T ss_pred EeHHHHHHHHh
Confidence 34678877764
No 18
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=42.60 E-value=1e+02 Score=22.89 Aligned_cols=11 Identities=18% Similarity=0.353 Sum_probs=7.0
Q ss_pred hHHHHHHHHHH
Q 020816 172 VLIDDFVEHMY 182 (321)
Q Consensus 172 ~LIDEFVE~~r 182 (321)
+=++||+.+++
T Consensus 136 i~~~eF~~~l~ 146 (147)
T 4ds7_A 136 INIKQFAALLS 146 (147)
T ss_dssp EEHHHHHHHTT
T ss_pred CcHHHHHHHHh
Confidence 44677777654
No 19
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=40.74 E-value=44 Score=25.13 Aligned_cols=12 Identities=8% Similarity=0.077 Sum_probs=7.9
Q ss_pred hHHHHHHHHHHH
Q 020816 172 VLIDDFVEHMYR 183 (321)
Q Consensus 172 ~LIDEFVE~~r~ 183 (321)
+=++||+..++.
T Consensus 129 i~~~eF~~~~~~ 140 (143)
T 3j04_B 129 FNYVEFTRILKH 140 (143)
T ss_dssp CCSTHHHHHHHS
T ss_pred CcHHHHHHHHhc
Confidence 345778877764
No 20
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=39.37 E-value=1.5e+02 Score=25.45 Aligned_cols=136 Identities=17% Similarity=0.169 Sum_probs=68.9
Q ss_pred cccHHHHHHHHhhhhhhhhccccchHHHHHHHHhcc-ccCChhhhhhhhhhhhhcccccCcccccHHHHHHHHHHhhcCc
Q 020816 45 KFSREALAELFNLVELTVHIRIFVFDELFKLMSQLD-LMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGR 123 (321)
Q Consensus 45 ~iSre~~t~L~~~~dg~~~lgc~tiDsLkkLl~~L~-l~~D~~~Fk~fY~FtF~fare~gQKsL~letAIa~W~LLL~~~ 123 (321)
.++++++..+-...+.....|.-+.+++++++..+. ........+. .|...-..+.-.|+.+.-+.++..+..+.
T Consensus 87 ~~s~~ei~~l~~~fd~~~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~----~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~ 162 (256)
T 2jul_A 87 KFTKKELQSLYRGFKNECPTGLVDEDTFKLIYSQFFPQGDATTYAHF----LFNAFDADGNGAIHFEDFVVGLSILLRGT 162 (256)
T ss_dssp TSCHHHHHHHHHHHHHHCTTSSEEHHHHHHHHHHHCCSSCCHHHHHH----HHHHSSCSCCSEECSHHHHHHHHHHHSCC
T ss_pred CCCHHHHHHHHHHHHhhCCCCcCCHHHHHHHHHHHcccCCcHHHHHH----HHHHhccCCCCcCcHHHHHHHHHHHhccC
Confidence 355666655544333322345566777777777653 2112222222 33333334455677777777776654322
Q ss_pred -cccHHHHHHHHHhhcCCccCHHhHHHHHHHHh------------------hhcccCCCCCCCCCCchHHHHHHHHHHHh
Q 020816 124 -FRLLNQWCDFVERNQRHNISEDTWQQVLAFSR------------------CVHENLEGYDPEGAWPVLIDDFVEHMYRV 184 (321)
Q Consensus 124 -f~~Ld~W~~FL~~~~~k~ISkDtW~q~l~F~~------------------~v~~dls~YDe~gAWP~LIDEFVE~~r~~ 184 (321)
-..+...+.-+.......|+.+....++.-.. .+..-+..+|.++-==+=++||+.++...
T Consensus 163 ~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~~ 242 (256)
T 2jul_A 163 VHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQKD 242 (256)
T ss_dssp HHHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCCSTTCSBCHHHHHHHHHHC
T ss_pred hHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhC
Confidence 12233333333333445688887777664321 11222445554433234578999888753
No 21
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=39.35 E-value=1.2e+02 Score=22.95 Aligned_cols=11 Identities=27% Similarity=0.425 Sum_probs=7.4
Q ss_pred hHHHHHHHHHH
Q 020816 172 VLIDDFVEHMY 182 (321)
Q Consensus 172 ~LIDEFVE~~r 182 (321)
+=++||+.++.
T Consensus 144 i~~~eF~~~~~ 154 (158)
T 2jnf_A 144 VDFEEFMGVMT 154 (158)
T ss_dssp ECSHHHHHHTS
T ss_pred EeHHHHHHHHh
Confidence 45677777765
No 22
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=37.47 E-value=85 Score=24.21 Aligned_cols=13 Identities=23% Similarity=0.437 Sum_probs=8.8
Q ss_pred hHHHHHHHHHHHh
Q 020816 172 VLIDDFVEHMYRV 184 (321)
Q Consensus 172 ~LIDEFVE~~r~~ 184 (321)
+=++||+.+++..
T Consensus 154 i~~~eF~~~~~~~ 166 (169)
T 3qrx_A 154 IDEDEFIRIMKKT 166 (169)
T ss_dssp BCHHHHHHHHC--
T ss_pred EeHHHHHHHHHhc
Confidence 4579999988743
No 23
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=37.05 E-value=82 Score=25.63 Aligned_cols=51 Identities=8% Similarity=0.019 Sum_probs=26.2
Q ss_pred cCCccCHHhHHHHHHHHh----hhcccCCCCCCCCCCchHHHHHHHHHHHhhCCC
Q 020816 138 QRHNISEDTWQQVLAFSR----CVHENLEGYDPEGAWPVLIDDFVEHMYRVSGSK 188 (321)
Q Consensus 138 ~~k~ISkDtW~q~l~F~~----~v~~dls~YDe~gAWP~LIDEFVE~~r~~~gs~ 188 (321)
....|+++....++.-.. .+..-+..+|.++-=-+=++||+.++....++.
T Consensus 141 ~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~ 195 (208)
T 2hpk_A 141 GDGTVDVDELKTMMKAFDVPQEAAYTFFEKADTDKSGKLERTELVHLFRKFWMEP 195 (208)
T ss_dssp CSSSBCHHHHHHHHHHTTSCTTHHHHHHHHHCTTCCSSBCHHHHHHHHHHHHC--
T ss_pred CCCcCCHHHHHHHHHHhCcCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCC
Confidence 344566666655552211 001113334444333467899999999776543
No 24
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=35.73 E-value=1.3e+02 Score=24.63 Aligned_cols=135 Identities=17% Similarity=0.119 Sum_probs=70.6
Q ss_pred ccccHHHHHHHHhhhhhhhhcc-ccchHHHHHHHHhcccc----CChhhhhhhh------hhhhhcccccCcccccHHHH
Q 020816 44 AKFSREALAELFNLVELTVHIR-IFVFDELFKLMSQLDLM----GDFSEFSRFY------DFVFFMCRENGQKNITVSRA 112 (321)
Q Consensus 44 a~iSre~~t~L~~~~dg~~~lg-c~tiDsLkkLl~~L~l~----~D~~~Fk~fY------~FtF~fare~gQKsL~letA 112 (321)
+.|+.+++..++...-.....| ..+.++++.++..++.. -+...|..++ +.+|...= .+.-.|+.+.-
T Consensus 19 G~I~~~EL~~~l~~l~~~~~~g~~~~~~~~~~l~~~~D~d~~G~I~f~EF~~~~~~~~~l~~aF~~fD-d~~G~I~~~El 97 (174)
T 2i7a_A 19 SDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFARLWKRLVHYQHVFQKVQ-TSPGVLLSSDL 97 (174)
T ss_dssp CCEEHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHHHHHHHHHHHHHC-SBTTBEEGGGH
T ss_pred CcCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHHHHHHHHHHhc-CCCCcCCHHHH
Confidence 4677877754443220000001 34577888888877632 2345565543 34565444 55556777655
Q ss_pred HHHHHHhh---cCc--cccHHHHHHHHHhhcCCccCHHhHHHHHHHHhhhcccCCCCCCCCC-CchHHHHHHHH
Q 020816 113 VTAWRLVL---AGR--FRLLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGA-WPVLIDDFVEH 180 (321)
Q Consensus 113 Ia~W~LLL---~~~--f~~Ld~W~~FL~~~~~k~ISkDtW~q~l~F~~~v~~dls~YDe~gA-WP~LIDEFVE~ 180 (321)
..+.+.+. +.. -..++..+.-+. .....|+.+.|..++.-...+..-+..||.++. =..-.+||++.
T Consensus 98 ~~~l~~l~~~~G~~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~~~~~~~~~F~~~D~d~~GI~~~~~Ef~~~ 170 (174)
T 2i7a_A 98 WKAIENTDFLRGIFISRELLHLVTLRYS-DSVGRVSFPSLVCFLMRLEAMAKTFRNLSKDGKGLYLTEMEWMSL 170 (174)
T ss_dssp HHHHHTCGGGTTCCCCHHHHHHHHHHHS-CTTSEECHHHHHHHHHHHHHHHHHHHHHCSSSSCCCCCHHHHHHH
T ss_pred HHHHHHhHhccCCCCCHHHHHHHHHHHc-CCCCeEcHHHHHHHHHHHHHHHHHHHHhCCCCCCceecHHHHHHH
Confidence 55555441 111 122334443333 334568888887777655555555666665433 23346676654
No 25
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=35.33 E-value=57 Score=25.62 Aligned_cols=15 Identities=33% Similarity=0.512 Sum_probs=9.5
Q ss_pred hHHHHHHHHHHHhhC
Q 020816 172 VLIDDFVEHMYRVSG 186 (321)
Q Consensus 172 ~LIDEFVE~~r~~~g 186 (321)
+=++||+.++....+
T Consensus 137 i~~~eF~~~~~~~~~ 151 (179)
T 2f2o_A 137 VNYEEFVQMMTAKGG 151 (179)
T ss_dssp EEHHHHHHHSCC---
T ss_pred CcHHHHHHHHHHcCC
Confidence 567899998875443
No 26
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=35.31 E-value=1.5e+02 Score=22.84 Aligned_cols=98 Identities=10% Similarity=0.031 Sum_probs=51.5
Q ss_pred hhhhhhhcccccCcccccHHHHHHHHHHhhcC-----c-----cccHHHHHHHHHhhcCCccCHHhHHHHHHHHh----h
Q 020816 91 FYDFVFFMCRENGQKNITVSRAVTAWRLVLAG-----R-----FRLLNQWCDFVERNQRHNISEDTWQQVLAFSR----C 156 (321)
Q Consensus 91 fY~FtF~fare~gQKsL~letAIa~W~LLL~~-----~-----f~~Ld~W~~FL~~~~~k~ISkDtW~q~l~F~~----~ 156 (321)
+++..|...-..+...|+.+.-+.++..+... . -..+...+.-+.......||.+.+..++.-.. .
T Consensus 61 ~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g~~~~~ 140 (185)
T 2sas_A 61 EWRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQCAD 140 (185)
T ss_dssp HHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCCCCSS
T ss_pred HHHHHHHhcCCCCCCeEcHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhCCCHHH
Confidence 33444544434455567777666666665432 0 02234444444444556688887777662110 0
Q ss_pred hcccCCCCCCCCCCchHHHHHHHHHHHhhCCC
Q 020816 157 VHENLEGYDPEGAWPVLIDDFVEHMYRVSGSK 188 (321)
Q Consensus 157 v~~dls~YDe~gAWP~LIDEFVE~~r~~~gs~ 188 (321)
+..-+..+|.++.=-+-++||+.+++....+.
T Consensus 141 ~~~~~~~~D~d~dG~i~~~ef~~~~~~~~~s~ 172 (185)
T 2sas_A 141 VPAVYNVITDGGKVTFDLNRYKELYYRLLTSP 172 (185)
T ss_dssp HHHHHHHHHTTTTSCCSHHHHHHHHHHHHHCS
T ss_pred HHHHHHHhcCCCCCcCcHHHHHHHHHHHhcCC
Confidence 01112334443333466899999999776553
No 27
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=34.99 E-value=1.8e+02 Score=23.46 Aligned_cols=11 Identities=27% Similarity=0.531 Sum_probs=8.6
Q ss_pred hHHHHHHHHHH
Q 020816 172 VLIDDFVEHMY 182 (321)
Q Consensus 172 ~LIDEFVE~~r 182 (321)
+=++||+.++.
T Consensus 165 Is~~Ef~~~~~ 175 (204)
T 1jba_A 165 LSLNEFVEGAR 175 (204)
T ss_dssp BCHHHHHHHHT
T ss_pred EcHHHHHHHHH
Confidence 55788888876
No 28
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=33.47 E-value=94 Score=23.99 Aligned_cols=22 Identities=14% Similarity=0.283 Sum_probs=14.3
Q ss_pred CCCCCCCchHHHHHHHHHHHhh
Q 020816 164 YDPEGAWPVLIDDFVEHMYRVS 185 (321)
Q Consensus 164 YDe~gAWP~LIDEFVE~~r~~~ 185 (321)
+|.++-=-+-++||+.+++...
T Consensus 145 ~D~d~dg~i~~~ef~~~~~~~~ 166 (176)
T 1nya_A 145 VDTNGNGELSLDELLTAVRDFH 166 (176)
T ss_dssp HCTTCSSEEEHHHHHHHHSCCS
T ss_pred hCCCCCCCCcHHHHHHHHHHHh
Confidence 3444333467899999987544
No 29
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=33.43 E-value=39 Score=31.17 Aligned_cols=49 Identities=16% Similarity=0.415 Sum_probs=40.5
Q ss_pred cHHHHHHHHHhhcCCccCHHhHHHHHHHHhhhcccCCCCCCCCCCchHHHHHHHHHHHh
Q 020816 126 LLNQWCDFVERNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYRV 184 (321)
Q Consensus 126 ~Ld~W~~FL~~~~~k~ISkDtW~q~l~F~~~v~~dls~YDe~gAWP~LIDEFVE~~r~~ 184 (321)
++..-.+|+++. .+|.|.|..-++|+..+. ..+-|+.|+|-||+.+-..
T Consensus 13 lv~hlh~f~re~---~lT~~E~~~~i~~l~~~G-------~r~E~~Lll~~lvd~~~~~ 61 (254)
T 2boy_A 13 MIAAINAVIKDE---KVSYSEYKASTGWLISVG-------EKNEWPLFLDVFFEHAIES 61 (254)
T ss_dssp HHHHHHHHHHHH---TCCHHHHHHHHHHHHHHH-------HTTCHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHh---CCCHHHHHHHHHHHHHHh-------hcCcHHHHHHHHHHHHhcc
Confidence 455666777764 599999999999999987 7789999999999877643
No 30
>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}
Probab=32.35 E-value=62 Score=27.34 Aligned_cols=123 Identities=11% Similarity=0.061 Sum_probs=58.2
Q ss_pred ccccchHHHHH-HHHhccccCChhhhhhhhhhhhhcc-----cccCcccccHHHHHHHHHHhhcC-ccccHHHHHHHHHh
Q 020816 64 IRIFVFDELFK-LMSQLDLMGDFSEFSRFYDFVFFMC-----RENGQKNITVSRAVTAWRLVLAG-RFRLLNQWCDFVER 136 (321)
Q Consensus 64 lgc~tiDsLkk-Ll~~L~l~~D~~~Fk~fY~FtF~fa-----re~gQKsL~letAIa~W~LLL~~-~f~~Ld~W~~FL~~ 136 (321)
.|.-+.+++.+ ++..+.+.......+.++.-.|... -..+...|+.+.-+.++..+-.. ....+...+..+..
T Consensus 65 dG~Is~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~ 144 (226)
T 2lvv_A 65 TGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLVEFLEFRLMLCYIYDIFELTVMFDTMDK 144 (226)
T ss_dssp CSCBCSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred CCcCcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHHHHHHHHHHHHhccCHHHHHHHHHHHcC
Confidence 35556677776 4444443222334444444444433 12333345554433322111110 01123333333334
Q ss_pred hcCCccCHHhHHHHHHHHhh-------hcccCCCCCCCCCCchHHHHHHHHHHHhhC
Q 020816 137 NQRHNISEDTWQQVLAFSRC-------VHENLEGYDPEGAWPVLIDDFVEHMYRVSG 186 (321)
Q Consensus 137 ~~~k~ISkDtW~q~l~F~~~-------v~~dls~YDe~gAWP~LIDEFVE~~r~~~g 186 (321)
.....||++....++.=+.. +..-+..+|.++-=-+=++||+.+++....
T Consensus 145 d~dG~Is~~El~~~l~~~~~~g~~~~e~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~ 201 (226)
T 2lvv_A 145 DGSLLLELQEFKEALPKLKEWGVDITDATTVFNEIDTNGSGVVTFDEFSCWAVTKKL 201 (226)
T ss_dssp SSCCEECHHHHHHHHHHHHHHTCCCCSCHHHHHHHCCSCSSCEEHHHHHHHHHHHHH
T ss_pred CCCCeEcHHHHHHHHHHHhhcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhcCC
Confidence 44456888887777643311 111234455444334668999999986554
No 31
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=32.10 E-value=2e+02 Score=23.15 Aligned_cols=82 Identities=11% Similarity=0.067 Sum_probs=41.1
Q ss_pred CcccccHHHHHHHHHHhhcC-ccccHHHHHHHHHhhcCCccCHHhHHHHHHHHh--------------------hhcccC
Q 020816 103 GQKNITVSRAVTAWRLVLAG-RFRLLNQWCDFVERNQRHNISEDTWQQVLAFSR--------------------CVHENL 161 (321)
Q Consensus 103 gQKsL~letAIa~W~LLL~~-~f~~Ld~W~~FL~~~~~k~ISkDtW~q~l~F~~--------------------~v~~dl 161 (321)
+.-.|+.+.-+.++..+... .-..+...+..+.......|+.+.+..++.-.. .+..-+
T Consensus 84 ~~G~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~f 163 (207)
T 2d8n_A 84 LDGTLDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIW 163 (207)
T ss_dssp CCSEEEHHHHHHHHHHHSCSSSSTTHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCHHHHHTSCTTTSSHHHHHHHHH
T ss_pred CCCeEeHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeEcHHHHHHHHHHHHHHhccccCCCcccccccHHHHHHHHH
Confidence 34456665555555443321 112344444444444445677777766664320 122224
Q ss_pred CCCCCCCCCchHHHHHHHHHHHh
Q 020816 162 EGYDPEGAWPVLIDDFVEHMYRV 184 (321)
Q Consensus 162 s~YDe~gAWP~LIDEFVE~~r~~ 184 (321)
..+|.++-==+=++||+.++...
T Consensus 164 ~~~D~d~dG~I~~~Ef~~~~~~~ 186 (207)
T 2d8n_A 164 KYFGKNDDDKLTEKEFIEGTLAN 186 (207)
T ss_dssp HHTTCCTTCCEEHHHHHHHHHHC
T ss_pred HHcCCCCCCcCcHHHHHHHHHhC
Confidence 44554332235579999988743
No 32
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=31.34 E-value=1.7e+02 Score=22.15 Aligned_cols=22 Identities=18% Similarity=0.182 Sum_probs=14.6
Q ss_pred CCCCCCCchHHHHHHHHHHHhh
Q 020816 164 YDPEGAWPVLIDDFVEHMYRVS 185 (321)
Q Consensus 164 YDe~gAWP~LIDEFVE~~r~~~ 185 (321)
+|.++.==+=++||+.++....
T Consensus 131 ~D~d~dg~i~~~eF~~~~~~~~ 152 (156)
T 1wdc_C 131 LQEDLEGNVKYEDFVKKVMAGP 152 (156)
T ss_dssp CCCCTTSEEEHHHHHHHHHHCS
T ss_pred CCCCCCCcEeHHHHHHHHhcCC
Confidence 4544443466899999988643
No 33
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Probab=30.60 E-value=2e+02 Score=22.62 Aligned_cols=21 Identities=14% Similarity=0.129 Sum_probs=12.4
Q ss_pred CCCCCCCchHHHHHHHHHHHh
Q 020816 164 YDPEGAWPVLIDDFVEHMYRV 184 (321)
Q Consensus 164 YDe~gAWP~LIDEFVE~~r~~ 184 (321)
+|.++.==+=++||+.+++..
T Consensus 156 ~D~d~dG~i~~~ef~~~~~~~ 176 (190)
T 1g8i_A 156 MDKNADGKLTLQEFQEGSKAD 176 (190)
T ss_dssp HCSSCSSEEEHHHHHHHHHHC
T ss_pred hcCCCCCcEeHHHHHHHHHhC
Confidence 343333235678888887753
No 34
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=30.60 E-value=95 Score=23.17 Aligned_cols=11 Identities=36% Similarity=0.549 Sum_probs=7.0
Q ss_pred hHHHHHHHHHH
Q 020816 172 VLIDDFVEHMY 182 (321)
Q Consensus 172 ~LIDEFVE~~r 182 (321)
+=++||+.++.
T Consensus 128 i~~~eF~~~~~ 138 (140)
T 1ggw_A 128 VNYHDFVQMIL 138 (140)
T ss_dssp STTTHHHHHHH
T ss_pred EeHHHHHHHHh
Confidence 44567777765
No 35
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=29.91 E-value=1.8e+02 Score=21.96 Aligned_cols=11 Identities=27% Similarity=0.540 Sum_probs=8.0
Q ss_pred hHHHHHHHHHH
Q 020816 172 VLIDDFVEHMY 182 (321)
Q Consensus 172 ~LIDEFVE~~r 182 (321)
+=++||+.++.
T Consensus 149 i~~~eF~~~~~ 159 (162)
T 1top_A 149 IDFDEFLKMME 159 (162)
T ss_dssp BCHHHHHHHHH
T ss_pred CcHHHHHHHHh
Confidence 55788888775
No 36
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=29.77 E-value=1.4e+02 Score=29.03 Aligned_cols=73 Identities=19% Similarity=0.276 Sum_probs=43.6
Q ss_pred cccHHHHHHHHHHhhcCccccHHHHHHHHHhhcC-CccCHHhHHHHHHHHhhhcccCCCCC----------CCCCCchHH
Q 020816 106 NITVSRAVTAWRLVLAGRFRLLNQWCDFVERNQR-HNISEDTWQQVLAFSRCVHENLEGYD----------PEGAWPVLI 174 (321)
Q Consensus 106 sL~letAIa~W~LLL~~~f~~Ld~W~~FL~~~~~-k~ISkDtW~q~l~F~~~v~~dls~YD----------e~gAWP~LI 174 (321)
.|....|.++|+--|+++-- -+|-.|...-.+ .+|.-..-.+-|.- +++...++|- =-|.||.++
T Consensus 134 ~i~k~~A~~fW~~~fg~~~~--v~W~~f~~~~~~~~~~~~~~~~~~lk~--~~~~t~~~~vs~~~f~~f~~~f~p~~~l~ 209 (389)
T 2y1n_A 134 RITKADAAEFWRKAFGEKTI--VPWKSFRQALHEVHPISSGLEAMALKS--TIDLTCNDYISVFEFDIFTRLFQPWSSLL 209 (389)
T ss_dssp CCSSHHHHHHHHHHHTTCSE--EEHHHHHHHHHTTSCCCCHHHHHHHHH--HHCTTCSSEEEHHHHHHHHHHTCCGGGHH
T ss_pred EecChHHHHHHHHhCCCCee--eeHHHHHHHHHHhcCCCCCchhhhHhh--ccCcccCCccchhhhchHHHHhccHHHHH
Confidence 46668899999999998732 468888765443 55555544443322 1222222221 138999998
Q ss_pred HHHHHHHH
Q 020816 175 DDFVEHMY 182 (321)
Q Consensus 175 DEFVE~~r 182 (321)
+.+-.-.+
T Consensus 210 ~~~~~~~~ 217 (389)
T 2y1n_A 210 RNWNSLAV 217 (389)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHh
Confidence 87655333
No 37
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=27.89 E-value=1.7e+02 Score=22.21 Aligned_cols=11 Identities=36% Similarity=0.615 Sum_probs=8.0
Q ss_pred hHHHHHHHHHH
Q 020816 172 VLIDDFVEHMY 182 (321)
Q Consensus 172 ~LIDEFVE~~r 182 (321)
+=++||+.+++
T Consensus 148 i~~~eF~~~~~ 158 (161)
T 1dtl_A 148 IDYDEFLEFMK 158 (161)
T ss_dssp EEHHHHHHHHH
T ss_pred EeHHHHHHHHH
Confidence 55778888775
No 38
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A
Probab=26.99 E-value=2.3e+02 Score=22.22 Aligned_cols=12 Identities=25% Similarity=0.382 Sum_probs=8.8
Q ss_pred hHHHHHHHHHHH
Q 020816 172 VLIDDFVEHMYR 183 (321)
Q Consensus 172 ~LIDEFVE~~r~ 183 (321)
+=++||+.+++.
T Consensus 164 I~~~Ef~~~~~~ 175 (190)
T 1fpw_A 164 ITLDEFREGSKV 175 (190)
T ss_dssp EEHHHHHHHHHS
T ss_pred CcHHHHHHHHHh
Confidence 557888888774
No 39
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=26.23 E-value=2.4e+02 Score=22.19 Aligned_cols=52 Identities=12% Similarity=0.013 Sum_probs=26.8
Q ss_pred hhcCCccCHHhHHHHHHHHh----hhcccCCCCCCCCCCchHHHHHHHHHHHhhCC
Q 020816 136 RNQRHNISEDTWQQVLAFSR----CVHENLEGYDPEGAWPVLIDDFVEHMYRVSGS 187 (321)
Q Consensus 136 ~~~~k~ISkDtW~q~l~F~~----~v~~dls~YDe~gAWP~LIDEFVE~~r~~~gs 187 (321)
......|+.+....++.-.. .+..-+..+|.++-=-+=++||+..+++...+
T Consensus 120 ~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~~~~s 175 (191)
T 2ccm_A 120 TSGDNIIDKHEYSTVYMSYGIPKSDCDAAFDTLSDGGKTMVTREIFARLWTEYFVS 175 (191)
T ss_dssp TTCSSBCCHHHHHHHHHTTTCCHHHHHHHHHHHTTTTTSCCBHHHHHHHHHHHHHC
T ss_pred CCCCCcCcHHHHHHHHHHhCCCHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhcC
Confidence 33344566666555542110 01112333444333336689999999877644
No 40
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=24.88 E-value=2.5e+02 Score=22.01 Aligned_cols=22 Identities=9% Similarity=0.232 Sum_probs=13.8
Q ss_pred CCCCCCCCCCchHHHHHHHHHH
Q 020816 161 LEGYDPEGAWPVLIDDFVEHMY 182 (321)
Q Consensus 161 ls~YDe~gAWP~LIDEFVE~~r 182 (321)
+..+|.++-==+=++||+.++.
T Consensus 153 f~~~D~d~dG~I~~~Ef~~~~~ 174 (193)
T 1bjf_A 153 FRQMDTNRDGKLSLEEFIRGAK 174 (193)
T ss_dssp HHHSCTTCSSEECHHHHHHHHH
T ss_pred HHHhCCCCCCeEeHHHHHHHHh
Confidence 3445555444466788888876
No 41
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=24.61 E-value=1.1e+02 Score=24.98 Aligned_cols=110 Identities=11% Similarity=0.077 Sum_probs=52.3
Q ss_pred cccchHHHHHHHHhccccCChhhhhhhhhhhhhcccccCcccccHHHHHHHHHHhhcCcc--ccHHHHHHHHHhhcCCcc
Q 020816 65 RIFVFDELFKLMSQLDLMGDFSEFSRFYDFVFFMCRENGQKNITVSRAVTAWRLVLAGRF--RLLNQWCDFVERNQRHNI 142 (321)
Q Consensus 65 gc~tiDsLkkLl~~L~l~~D~~~Fk~fY~FtF~fare~gQKsL~letAIa~W~LLL~~~f--~~Ld~W~~FL~~~~~k~I 142 (321)
|.-+.+++..++..|.+......+..++.-. .-.|+.+.-+.++...+.... ..+...+..+.......|
T Consensus 72 G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~--------~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I 143 (196)
T 3dtp_E 72 GFISKNDIRATFDSLGRLCTEQELDSMVAEA--------PGPINFTMFLTIFGDRIAGTDEEDVIVNAFNLFDEGDGKCK 143 (196)
T ss_dssp SBCCHHHHHHHHHTTSCCCCHHHHHHHHTTS--------SSCCBHHHHHHHHHHCCCSSCCHHHHHHHHHTTCSSSSCCB
T ss_pred CcCCHHHHHHHHHHhCCCCCHHHHHHHHHHc--------cCCCcHHHHHHHHHHHhcCCCcHHHHHHHHHHHCCCCCCcC
Confidence 4455666666666655333334444443322 234555555555554443321 112222222222334456
Q ss_pred CHHhHHHHHHHHh------hhcccCCCCCCCCCCchHHHHHHHHHHH
Q 020816 143 SEDTWQQVLAFSR------CVHENLEGYDPEGAWPVLIDDFVEHMYR 183 (321)
Q Consensus 143 SkDtW~q~l~F~~------~v~~dls~YDe~gAWP~LIDEFVE~~r~ 183 (321)
+.+....++ -+. .+..-+..+|.++-==+=++||+.+++.
T Consensus 144 s~~El~~~l-~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~ 189 (196)
T 3dtp_E 144 EETLKRSLT-TWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQILTK 189 (196)
T ss_dssp HHHHHHHHH-HSSSCCCHHHHHHHHHSSCEETTEECHHHHHHHHHSS
T ss_pred cHHHHHHHH-HcCCCCCHHHHHHHHHHcCCCCCCEEeHHHHHHHHHc
Confidence 666666665 111 0112244566544334668899998874
No 42
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=23.39 E-value=2.9e+02 Score=22.16 Aligned_cols=98 Identities=13% Similarity=0.122 Sum_probs=45.1
Q ss_pred chHHHHHHHHhccccCC----hhhhhhhhh------hhhhcccccCcccccHHHHHHHHHHhhcC-ccccHHHHHHHHHh
Q 020816 68 VFDELFKLMSQLDLMGD----FSEFSRFYD------FVFFMCRENGQKNITVSRAVTAWRLVLAG-RFRLLNQWCDFVER 136 (321)
Q Consensus 68 tiDsLkkLl~~L~l~~D----~~~Fk~fY~------FtF~fare~gQKsL~letAIa~W~LLL~~-~f~~Ld~W~~FL~~ 136 (321)
+.+.++.++..++...+ ...|..++. -+|...=..+.-.|+.+.-..+.+-+-.. .-..++..+.-+
T Consensus 71 ~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~-- 148 (198)
T 1juo_A 71 NLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY-- 148 (198)
T ss_dssp CHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHT--
T ss_pred CHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHh--
Confidence 45666666666553222 233433322 22433322344456665544444432110 111233333333
Q ss_pred hcCCccCHHhHHHHHHHHhhhcccCCCCCCC
Q 020816 137 NQRHNISEDTWQQVLAFSRCVHENLEGYDPE 167 (321)
Q Consensus 137 ~~~k~ISkDtW~q~l~F~~~v~~dls~YDe~ 167 (321)
.....|+.+.|..++.-...+..-+..+|.+
T Consensus 149 d~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d 179 (198)
T 1juo_A 149 STNGKITFDDYIACCVKLRALTDSFRRRDTA 179 (198)
T ss_dssp CSSSSEEHHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred CCCCeEcHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3345577777776665555554555556554
No 43
>1jw2_A Hemolysin expression modulating protein HHA; structural genomics, protein structure initiative, OCSP, NESG, PSI; NMR {Escherichia coli} SCOP: a.23.5.1 PDB: 2jvp_A 2k5s_A
Probab=23.35 E-value=61 Score=24.82 Aligned_cols=40 Identities=18% Similarity=0.221 Sum_probs=27.0
Q ss_pred ccHHHHHHHHhhhhhhhhccccchHHHHHHHHhccccCChhhhhhhhh
Q 020816 46 FSREALAELFNLVELTVHIRIFVFDELFKLMSQLDLMGDFSEFSRFYD 93 (321)
Q Consensus 46 iSre~~t~L~~~~dg~~~lgc~tiDsLkkLl~~L~l~~D~~~Fk~fY~ 93 (321)
+++++| | +.+-+|.++|+|.+++.++.-.-.++....||.
T Consensus 6 Mtk~d~--L------~k~Rrc~s~eTLEkv~e~~~y~Lt~~el~~f~~ 45 (72)
T 1jw2_A 6 LTKTDY--L------MRLRRCQTIDTLERVIEKNKYELSDNELAVFYS 45 (72)
T ss_dssp CCHHHH--H------HHHHTSSCHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred ccHHHH--H------HHHHhcCcHHHHHHHHHHhhccCCHHHHHHHHH
Confidence 477777 3 355689999999999999872223335555553
No 44
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=23.00 E-value=2.3e+02 Score=20.89 Aligned_cols=11 Identities=27% Similarity=0.658 Sum_probs=8.4
Q ss_pred hHHHHHHHHHH
Q 020816 172 VLIDDFVEHMY 182 (321)
Q Consensus 172 ~LIDEFVE~~r 182 (321)
+=++||+.++.
T Consensus 137 i~~~eF~~~~~ 147 (149)
T 2mys_C 137 INYEAFVKHIM 147 (149)
T ss_pred EeHHHHHHHHh
Confidence 66788888775
No 45
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=22.22 E-value=6.4e+02 Score=25.71 Aligned_cols=119 Identities=12% Similarity=0.078 Sum_probs=55.4
Q ss_pred cchHHHHHHHHhcccc----CChhhhhhhh------hhhhhcccccCcccccHHHHHHHHHHh-hcCccccHHHHHHHHH
Q 020816 67 FVFDELFKLMSQLDLM----GDFSEFSRFY------DFVFFMCRENGQKNITVSRAVTAWRLV-LAGRFRLLNQWCDFVE 135 (321)
Q Consensus 67 ~tiDsLkkLl~~L~l~----~D~~~Fk~fY------~FtF~fare~gQKsL~letAIa~W~LL-L~~~f~~Ld~W~~FL~ 135 (321)
.+.+.++.++..++.. .+.+.|..++ +.+|...=..+.-.|+.+.-..+.+.+ +...-..++..+.-+.
T Consensus 572 ~s~~~~~~l~~~~D~d~~G~I~f~EF~~l~~~~~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~~ls~~~~~~l~~~~D 651 (714)
T 3bow_A 572 FSIETCKIMVDMLDEDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFA 651 (714)
T ss_dssp CCHHHHHHHHHHHCCSSCSSBCHHHHHHHHHHHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTEECCHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhC
Confidence 3456666666665532 2335555443 334443323344456665444433322 0011123444444443
Q ss_pred hhcCCccCHHhHHHHHHHHhhhcccCCCCCCCCCCchHHHHHHHHHHHhhCC
Q 020816 136 RNQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYRVSGS 187 (321)
Q Consensus 136 ~~~~k~ISkDtW~q~l~F~~~v~~dls~YDe~gAWP~LIDEFVE~~r~~~gs 187 (321)
.....|+.+.+..++.-...+..-+..+|.++.=-.-++|+ +|+...+.+
T Consensus 652 -d~dG~Isf~EF~~~l~~~~~l~~~F~~~D~d~dG~Is~~el-~~l~~~~~~ 701 (714)
T 3bow_A 652 -DDELIIDFDNFVRCLVRLEILFKIFKQLDPENTGTIQLDLI-SWLSFSVLG 701 (714)
T ss_dssp -CTTCEECHHHHHHHHHHHHHHHHHHSSSCSSCCSEEEEEHH-HHHHHHHHC
T ss_pred -CCCCeEcHHHHHHHHHHHHHHHHHHHHhCCCCCCcEEHHHH-HHHHHHHHH
Confidence 33455777777666655445555566666654422223442 455444433
No 46
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=21.82 E-value=2.2e+02 Score=21.22 Aligned_cols=23 Identities=22% Similarity=0.431 Sum_probs=15.2
Q ss_pred CCCCCCCCCCchHHHHHHHHHHH
Q 020816 161 LEGYDPEGAWPVLIDDFVEHMYR 183 (321)
Q Consensus 161 ls~YDe~gAWP~LIDEFVE~~r~ 183 (321)
+..+|.++.=-+=++||+.+++.
T Consensus 125 ~~~~d~d~dg~i~~~eF~~~~~~ 147 (148)
T 1m45_A 125 LKGVEVDSNGEIDYKKFIEDVLR 147 (148)
T ss_dssp HTTCCCCTTSEEEHHHHHHHHHC
T ss_pred HHHhCCCCCCeEeHHHHHHHHhc
Confidence 34556555445778999988763
No 47
>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}
Probab=21.76 E-value=29 Score=28.09 Aligned_cols=53 Identities=19% Similarity=0.160 Sum_probs=33.0
Q ss_pred ccccHHHHHHHHhh--hhhhhhccccchHHHHHHHHhccccCCh-hhhhhhhhhhhhc
Q 020816 44 AKFSREALAELFNL--VELTVHIRIFVFDELFKLMSQLDLMGDF-SEFSRFYDFVFFM 98 (321)
Q Consensus 44 a~iSre~~t~L~~~--~dg~~~lgc~tiDsLkkLl~~L~l~~D~-~~Fk~fY~FtF~f 98 (321)
+.||+.++.++.+- +..+ -...+-+.+.+++..++.-.|. -.|.+|..+....
T Consensus 29 G~Is~~EL~~~l~~~~~~~l--~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~l 84 (121)
T 4drw_A 29 GYLTKEDLRVLMEKEFPGFL--ENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL 84 (121)
T ss_dssp CSCCHHHHHHHTTTSCHHHH--TTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHHH
T ss_pred CEEcHHHHHHHHHHHhhhhc--ccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 45788888666542 1111 1234677889999998864443 5677777666543
No 48
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=20.10 E-value=3.4e+02 Score=21.71 Aligned_cols=22 Identities=14% Similarity=0.138 Sum_probs=14.1
Q ss_pred CCCCCCCchHHHHHHHHHHHhh
Q 020816 164 YDPEGAWPVLIDDFVEHMYRVS 185 (321)
Q Consensus 164 YDe~gAWP~LIDEFVE~~r~~~ 185 (321)
+|.++.==+=++||+.++....
T Consensus 164 ~D~d~dG~I~~~Ef~~~~~~~~ 185 (207)
T 2ehb_A 164 ADRKNDGKIDIDEWKDFVSLNP 185 (207)
T ss_dssp HCTTCSSEECHHHHHHHHHHCG
T ss_pred hCCCCCCcCcHHHHHHHHHhCh
Confidence 3443333366899999998643
No 49
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=20.01 E-value=3e+02 Score=21.04 Aligned_cols=23 Identities=13% Similarity=0.075 Sum_probs=14.4
Q ss_pred CCCCCCCCCchHHHHHHHHHHHh
Q 020816 162 EGYDPEGAWPVLIDDFVEHMYRV 184 (321)
Q Consensus 162 s~YDe~gAWP~LIDEFVE~~r~~ 184 (321)
..+|.++-==+=++||+..+...
T Consensus 138 ~~~D~d~dg~I~~~eF~~~~~~~ 160 (166)
T 2mys_B 138 AAFPPDVAGNVDYKNICYVITHG 160 (166)
T ss_pred HhcCCCCCCeEeHHHHHHHHHhc
Confidence 34554433336678999988754
Done!