BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>020824
MANAWKRDTKHPKLTPKILLSLLFPCLLLFFIFYFNSHSYNPNPNPYLSVTSSFHSPSFP
AFNCLKCPQSHPIIANVVENVKYPFIYSLSDLGNLPDKPHKNIVRLLKGKPFRKPDISVT
IQEILEKMKKEGKNGLVVDVGANVGMASFAAAVMGFRVLSFEPVFENLQRICDGVWFNRV
GDLVTVYEAAVSDRIGNITFHKLVGRLDNSAVSATGAKLAFKSNEEIALQVRSIPLDEVI
PEAEPVLLLKIDVQGWEYHVLKGATKLLSRKKGESPYLIYEEDEHLLQASNSSAKEIREF
LHSVGYHHCNQHGTDAHCTKD

High Scoring Gene Products

Symbol, full name Information P value
AT2G26680 protein from Arabidopsis thaliana 1.6e-118
Rv2955c
Conserved protein
protein from Mycobacterium tuberculosis 2.9e-06
MCA1157
Methyltransferase, FkbM family
protein from Methylococcus capsulatus str. Bath 0.00044

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  020824
        (321 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2043863 - symbol:AT2G26680 "AT2G26680" species...  1167  1.6e-118  1
UNIPROTKB|P95137 - symbol:Rv2955c "Conserved protein" spe...   133  2.9e-06   1
UNIPROTKB|Q609S1 - symbol:MCA1157 "Methyltransferase, Fkb...   112  0.00044   1


>TAIR|locus:2043863 [details] [associations]
            symbol:AT2G26680 "AT2G26680" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005794 "Golgi apparatus"
            evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
            GO:GO:0005886 GO:GO:0005794 EMBL:CP002685 GenomeReviews:CT485783_GR
            EMBL:AC003105 InterPro:IPR006342 Pfam:PF05050 IPI:IPI00521109
            PIR:E84663 RefSeq:NP_565628.1 UniGene:At.38860
            ProteinModelPortal:O48783 SMR:O48783 PaxDb:O48783 PRIDE:O48783
            EnsemblPlants:AT2G26680.1 GeneID:817209 KEGG:ath:AT2G26680
            TAIR:At2g26680 eggNOG:NOG321980 HOGENOM:HOG000240185
            InParanoid:O48783 OMA:HPHKNIA PhylomeDB:O48783
            ProtClustDB:CLSN2688455 ArrayExpress:O48783 Genevestigator:O48783
            TIGRFAMs:TIGR01444 Uniprot:O48783
        Length = 319

 Score = 1167 (415.9 bits), Expect = 1.6e-118, P = 1.6e-118
 Identities = 226/322 (70%), Positives = 261/322 (81%)

Query:     1 MANAWKRDTKHPKLTPK-IXXXXXXXXXXXXXXXXXNSHSYXXXXXXYLSVTSSFHSPSF 59
             MA+AWK+D     L+PK +                  S+S        LS+ S +  P  
Sbjct:     1 MASAWKKDKNQKLLSPKTLISLLVLSIIFLSSLFFFFSNSSLQYSNPNLSINSPY--P-I 57

Query:    60 PAFNCLKCPQSHPIIANVVENVKYPFIYSLSDLGNLPDKPHKNIVRLLKGKPFRKPDISV 119
             P F+C KCPQS PIIANVVEN+KYPF+YSL+DLGNLP+KPHKNIVRLLKGKPFRKPDIS 
Sbjct:    58 PPFDCFKCPQSKPIIANVVENLKYPFVYSLADLGNLPEKPHKNIVRLLKGKPFRKPDISA 117

Query:   120 TIQEILEKMKKEGKNGLVVDVGANVGMASFAAAVMGFRVLSFEPVFENLQRICDGVWFNR 179
             TIQE+L+ M+  GKNG+VVDVGANVGMASFAAAVMGF+VL+FEPVFENLQRICDG+WFNR
Sbjct:   118 TIQEVLDSMRASGKNGIVVDVGANVGMASFAAAVMGFKVLAFEPVFENLQRICDGIWFNR 177

Query:   180 VGDLVTVYEAAVSDRIGNITFHKLVGRLDNSAVSATGAKLAFKSNEEIALQVRSIPLDEV 239
             V  LVTV+EAA SDR G+ITFHKLVGRLDNSAVS  GA+LAFKSN+EIA+QV+SIPLD++
Sbjct:   178 VASLVTVFEAAASDRTGDITFHKLVGRLDNSAVSEVGARLAFKSNKEIAVQVKSIPLDKL 237

Query:   240 IPEAEPVLLLKIDVQGWEYHVLKGATKLLSRKKGESPYLIYEEDEHLLQASNSSAKEIRE 299
             IP ++PVLL+KIDVQGWEYHVLKGA KLLS K  E+PYLIYEEDE LL ASNSS+KEIR+
Sbjct:   238 IPPSQPVLLIKIDVQGWEYHVLKGAKKLLSGKPAEAPYLIYEEDERLLTASNSSSKEIRD 297

Query:   300 FLHSVGYHHCNQHGTDAHCTKD 321
             FL SVGY  C+QHGTDAHCTK+
Sbjct:   298 FLKSVGYSKCSQHGTDAHCTKE 319


>UNIPROTKB|P95137 [details] [associations]
            symbol:Rv2955c "Conserved protein" species:1773
            "Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
            evidence=IDA] GO:GO:0005829 GO:GO:0005886 GO:GO:0005618
            GenomeReviews:AL123456_GR EMBL:BX842581 InterPro:IPR006342
            Pfam:PF05050 TIGRFAMs:TIGR01444 EMBL:AL123456 PIR:H70669
            RefSeq:NP_217471.1 RefSeq:YP_006516408.1 ProteinModelPortal:P95137
            SMR:P95137 PRIDE:P95137 EnsemblBacteria:EBMYCT00000002820
            GeneID:13317749 GeneID:887318 KEGG:mtu:Rv2955c KEGG:mtv:RVBD_2955c
            PATRIC:18155161 TubercuList:Rv2955c HOGENOM:HOG000220586
            OMA:YPEEANS ProtClustDB:CLSK792187 Uniprot:P95137
        Length = 321

 Score = 133 (51.9 bits), Expect = 2.9e-06, P = 2.9e-06
 Identities = 56/180 (31%), Positives = 81/180 (45%)

Query:   103 IVRLLKGKPFRKPDISVTIQEILEKMKKEGKNGLVVDVGANVGMASFAAAVMGFRVLSFE 162
             IVRL  G    + DI+  +   L   +       ++DVGANVG+ S A A +   V++ E
Sbjct:   103 IVRLTGGFEETEIDIAAALYSALYPDR------CILDVGANVGIHSLAWARLA-PVVALE 155

Query:   163 PVFENLQRICDGVWFNRVGDLVTVYEAAVSDRIGNITFHKLVGRLDNSAVSATGAKLAFK 222
             P      R+   V  N + D +     A  D +G + F        +SA S+       +
Sbjct:   156 PAPGTHSRLEANVAANGLQDRIRTLRTAAGDAVGEVDFFVAA----DSAFSSLNDTGRIR 211

Query:   223 SNEEIALQVRSIPLDEVIPEAE-PVLLLKIDVQGWEYHVLKGATKLLSRKKGESPYLIYE 281
               E    +V    LD +  E   PV LLKIDV+G E  V+ GA +LL R +   P L+ E
Sbjct:   212 IRERT--RVPCTTLDALAAELPLPVGLLKIDVEGLERAVIAGAAELLRRDR---PVLLVE 266


>UNIPROTKB|Q609S1 [details] [associations]
            symbol:MCA1157 "Methyltransferase, FkbM family"
            species:243233 "Methylococcus capsulatus str. Bath" [GO:0008150
            "biological_process" evidence=ND] GO:GO:0008168 EMBL:AE017282
            GenomeReviews:AE017282_GR InterPro:IPR006342 Pfam:PF05050
            TIGRFAMs:TIGR01444 RefSeq:YP_113626.1 ProteinModelPortal:Q609S1
            GeneID:3102106 KEGG:mca:MCA1157 PATRIC:22606138
            HOGENOM:HOG000128301 OMA:RMERIRI ProtClustDB:CLSK347047
            Uniprot:Q609S1
        Length = 253

 Score = 112 (44.5 bits), Expect = 0.00044, P = 0.00044
 Identities = 49/187 (26%), Positives = 86/187 (45%)

Query:   137 VVDVGANVGMASFAAAVM-----GFRVLSFEP---VFENLQRICDGVWFNRVGDLVTVYE 188
             V+D+GA  G   +A  ++     G  + SFEP    F  L+++       R    +  + 
Sbjct:    54 VLDIGACRG--GYAETILRTNFPGASIHSFEPSPIAFPVLEQVAA-----RSAGRIVAHN 106

Query:   189 AAVSDRIGNITFHKLVGRLDNSAVS-ATGAK-LAFKSN---EEIALQVRSIPLDEVIPEA 243
               + +R   +     +  L +S++  AT    LAF      E++ + +R+  LDEV P  
Sbjct:   107 FGLGERTETLKLRSAINSLPSSSLLLATETNTLAFPQTQLTEDLEVDIRA--LDEVAPML 164

Query:   244 EPV----LLLKIDVQGWEYHVLKGATKLLSRKKGESPYLIYEEDEHLLQASNSSAKEIRE 299
             +P     LL+KIDVQG+E  V++G  + ++R +      I E     L A   S ++I  
Sbjct:   165 DPAIEDDLLVKIDVQGFEDRVIRGGRQTIARARAA----IIEVQVEELYAGQPSFRDIFL 220

Query:   300 FLHSVGY 306
              +  +G+
Sbjct:   221 LMDEMGF 227


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.135   0.402    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      321       298   0.00094  115 3  11 22  0.40    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  611 (65 KB)
  Total size of DFA:  217 KB (2120 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.99u 0.11s 25.10t   Elapsed:  00:00:01
  Total cpu time:  24.99u 0.11s 25.10t   Elapsed:  00:00:01
  Start:  Fri May 10 10:33:42 2013   End:  Fri May 10 10:33:43 2013

Back to top