BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020824
(321 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|D4GYG5|AGLP_HALVD Methyltransferase AglP OS=Haloferax volcanii (strain ATCC 29605 /
DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM
B-1768 / DS2) GN=aglP PE=1 SV=1
Length = 239
Score = 40.0 bits (92), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 16/150 (10%)
Query: 122 QEILEKMKKEGKNGLVV-DVGANVGMASFAAAVMGFRVLSFEPVFENLQRICDGVWFNRV 180
Q+++ + +E + V+ DVG+N+G + + V +FEP + R+ + +R
Sbjct: 54 QDVIRLLLEEAEEDDVLWDVGSNIGTHACICSTKA-NVFAFEPNPDTFDRLTEN--SDRA 110
Query: 181 GDLVTVYEAAVSDRIGNITFHKLVGRLDNSAVSATGAKLAFKSNEEIALQVRSIPLDEVI 240
V +S G+I+F S ++A G K + E ++ +++I DE++
Sbjct: 111 PGTVIPLRYGLSSSSGDISFEP-------SPIAANGT---HKVSTEGSMTIKTISGDELV 160
Query: 241 PEAE--PVLLLKIDVQGWEYHVLKGATKLL 268
E ++K+DV+G E VLKG T L
Sbjct: 161 ESGEVPKPNVVKVDVEGHELEVLKGMTNAL 190
>sp|P55473|NOEI_RHISN 2-O-methyltransferase NoeI OS=Rhizobium sp. (strain NGR234) GN=noeI
PE=1 SV=1
Length = 243
Score = 39.3 bits (90), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 84/180 (46%), Gaps = 30/180 (16%)
Query: 112 FRKPDISVTI-QEILEKMKKEGKNGLVVDVGANVGMASFAAAVMGFR----VLSFEPVFE 166
RKP S+ + ++I+ ++K + +++D+G N G S A + R + FEP
Sbjct: 26 IRKPTSSLKVHRQIVSLLEK--PDPVILDIGCNDG--SDARRFLQLRPKAQLFCFEPDPR 81
Query: 167 NLQRICDGVWFNRVG--DLVTVYEAAVSDRIGNITFHKLVGRLDNSAVSATGAKLAFKS- 223
R + + G D + ++E A+SDR G I FH G D +G+ K+
Sbjct: 82 AAARCRENM-----GPLDRMRLFEVAISDRNGRIDFHPSNGDGDAKEWDLSGSIRQPKNH 136
Query: 224 ---------NEEIALQVRSIPLDEVIPEA--EPVLLLKIDVQGWEYHVLKGATKLLSRKK 272
+ I+++ R LD+ EA E + L+ +DVQG E V+ G + L++ +
Sbjct: 137 LSEYQWVRFDGPISVETRR--LDDWCSEAGLESIDLIWMDVQGAESDVIAGGKETLTKTR 194
>sp|B7GKD0|PRMA_ANOFW Ribosomal protein L11 methyltransferase OS=Anoxybacillus
flavithermus (strain DSM 21510 / WK1) GN=prmA PE=3 SV=1
Length = 312
Score = 38.1 bits (87), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 125 LEKMKKEGKNGLVVDVGANVGMASFAAAVMGFR---VLSFEPVFENLQRICDGVWFNRVG 181
LEK K+G VVDVG G+ S AAA++G + L +PV ++ V N+V
Sbjct: 169 LEKTVKKGDT--VVDVGTGSGILSIAAAMLGAKRVHALDLDPVAVESAKL--NVKLNKVH 224
Query: 182 DLVTVYEAAVSDRI 195
D+VTV + + DR+
Sbjct: 225 DVVTVSQNNLLDRM 238
>sp|A4IR29|PRMA_GEOTN Ribosomal protein L11 methyltransferase OS=Geobacillus
thermodenitrificans (strain NG80-2) GN=prmA PE=3 SV=1
Length = 312
Score = 36.2 bits (82), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 118 SVTIQEILEKMKKEGKNGLVVDVGANVGMASFAAAVMG---FRVLSFEPVFENLQRICDG 174
+V + LEK G N V+DVG G+ S AAA++G R L +PV + R+
Sbjct: 162 TVMCLQALEKYVHPGDN--VIDVGTGSGILSIAAAMLGAHSVRALDLDPVAIDSARL--N 217
Query: 175 VWFNRVGDLVTVYEAAVSDRI 195
V N+V +VTV + + D I
Sbjct: 218 VKLNKVQHVVTVAQNNLLDHI 238
>sp|Q5KWZ9|PRMA_GEOKA Ribosomal protein L11 methyltransferase OS=Geobacillus kaustophilus
(strain HTA426) GN=prmA PE=3 SV=1
Length = 312
Score = 35.8 bits (81), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 118 SVTIQEILEKMKKEGKNGLVVDVGANVGMASFAAAVMG---FRVLSFEPVFENLQRICDG 174
+V + LEK + G + V+DVG G+ S AAA++G R L +PV + R+
Sbjct: 162 TVMCLQALEKYVRPGDH--VIDVGTGSGILSIAAAMLGAQSVRALDLDPVAVDSARL--N 217
Query: 175 VWFNRVGDLVTVYEAAVSDRI 195
V N+V +VTV + + D I
Sbjct: 218 VKLNKVQHIVTVSQNNLLDHI 238
>sp|Q6GC92|AHPF_STAAS Alkyl hydroperoxide reductase subunit F OS=Staphylococcus aureus
(strain MSSA476) GN=ahpF PE=3 SV=1
Length = 507
Score = 35.4 bits (80), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 110/272 (40%), Gaps = 55/272 (20%)
Query: 52 SSFHSPSFPAFNCLKCPQSHPIIANVVENVKYPFIYSLSDLGNLPDKPHKNIVRL----L 107
SFH +F + C KCP + N++ + +S+ D G + + +NI+ + L
Sbjct: 115 GSFHFETFISLTCQKCPDVVQAL-NLMSVINPNITHSMID-GAVFREESENIMAVPAVFL 172
Query: 108 KGKPFRKPDISVTIQEILEKM----------KKEGKNGLVVDVGANVGMASFAAAVMGFR 157
G+ F +TIQ+IL K+ KE + L+V G G A+ A G R
Sbjct: 173 NGEEFGNG--RMTIQDILSKLGSTADASEFENKEPYDVLIVGGGPASGSAAIYTARKGLR 230
Query: 158 VLSFEPVFENLQRICDGVWFNRVG----------DLVTVYEAAVSDRIGNITFHKLVGRL 207
G+ +R+G + +TV E S+ N+ H + +
Sbjct: 231 T---------------GIVADRIGGQVNDTAGIENFITVKETTGSEFSSNLAAH--IDQY 273
Query: 208 DNSAVSATGAKLAFKSNEEIALQVRSIPLDEVIPEAEPVLLLKIDVQGWEYHVLKGATKL 267
D A++ A K++E I + + + + E++ V++ GW + G +L
Sbjct: 274 DIDAMTGIRATDIEKTDEAIKVTLE----NGAVLESKTVIIAT--GAGWRKLNIPGEEQL 327
Query: 268 LSRKKGESPY----LIYEEDEHLLQASNSSAK 295
+++ P+ L +D ++ NS +
Sbjct: 328 INKGVAFCPHCDGPLFENKDVAVIGGGNSGVE 359
>sp|Q6GJR8|AHPF_STAAR Alkyl hydroperoxide reductase subunit F OS=Staphylococcus aureus
(strain MRSA252) GN=ahpF PE=3 SV=1
Length = 507
Score = 35.0 bits (79), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 110/272 (40%), Gaps = 55/272 (20%)
Query: 52 SSFHSPSFPAFNCLKCPQSHPIIANVVENVKYPFIYSLSDLGNLPDKPHKNIVRL----L 107
SFH +F + C KCP + N++ + +S+ D G + + +NI+ + L
Sbjct: 115 GSFHFETFISLTCQKCPDVVQAL-NLMSVINPNITHSMID-GAVFREESENIMAVPAVFL 172
Query: 108 KGKPFRKPDISVTIQEILEKM----------KKEGKNGLVVDVGANVGMASFAAAVMGFR 157
G+ F +TIQ+IL K+ KE + L+V G G A+ A G R
Sbjct: 173 NGEEFGNG--RMTIQDILSKLGSTADASEFENKEPYDVLIVGGGPASGSAAIYTARKGLR 230
Query: 158 VLSFEPVFENLQRICDGVWFNRVG----------DLVTVYEAAVSDRIGNITFHKLVGRL 207
G+ +R+G + +TV E S+ N+ H + +
Sbjct: 231 T---------------GIVADRIGGQVNDTAGIENFITVKETTGSEFSSNLAAH--IDQY 273
Query: 208 DNSAVSATGAKLAFKSNEEIALQVRSIPLDEVIPEAEPVLLLKIDVQGWEYHVLKGATKL 267
D A++ A K++E I + + + + E++ V++ GW + G +L
Sbjct: 274 DIDAMTGIRATDIEKTDEAIKVTLE----NGAVLESKTVIIAT--GAGWRKLNIPGEEQL 327
Query: 268 LSRKKGESPY----LIYEEDEHLLQASNSSAK 295
+++ P+ L +D ++ NS +
Sbjct: 328 INKGVAFCPHCDGPLFENKDVAVIGGGNSGVE 359
>sp|P66013|AHPF_STAAW Alkyl hydroperoxide reductase subunit F OS=Staphylococcus aureus
(strain MW2) GN=ahpF PE=3 SV=1
Length = 507
Score = 35.0 bits (79), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 110/272 (40%), Gaps = 55/272 (20%)
Query: 52 SSFHSPSFPAFNCLKCPQSHPIIANVVENVKYPFIYSLSDLGNLPDKPHKNIVRL----L 107
SFH +F + C KCP + N++ + +S+ D G + + +NI+ + L
Sbjct: 115 GSFHFETFISLTCQKCPDVVQAL-NLMSVINPNITHSMID-GAVFREESENIMAVPAVFL 172
Query: 108 KGKPFRKPDISVTIQEILEKM----------KKEGKNGLVVDVGANVGMASFAAAVMGFR 157
G+ F +TIQ+IL K+ KE + L+V G G A+ A G R
Sbjct: 173 NGEEFGNG--RMTIQDILSKLGSTADASEFENKEPYDVLIVGGGPASGSAAIYTARKGLR 230
Query: 158 VLSFEPVFENLQRICDGVWFNRVG----------DLVTVYEAAVSDRIGNITFHKLVGRL 207
G+ +R+G + +TV E S+ N+ H + +
Sbjct: 231 T---------------GIVADRIGGQVNDTAGIENFITVKETTGSEFSSNLAAH--IDQY 273
Query: 208 DNSAVSATGAKLAFKSNEEIALQVRSIPLDEVIPEAEPVLLLKIDVQGWEYHVLKGATKL 267
D A++ A K++E I + + + + E++ V++ GW + G +L
Sbjct: 274 DIDAMTGIRATDIEKTDEAIKVTLE----NGAVLESKTVIIAT--GAGWRKLNIPGEEQL 327
Query: 268 LSRKKGESPY----LIYEEDEHLLQASNSSAK 295
+++ P+ L +D ++ NS +
Sbjct: 328 INKGVAFCPHCDGPLFENKDVAVIGGGNSGVE 359
>sp|P99118|AHPF_STAAN Alkyl hydroperoxide reductase subunit F OS=Staphylococcus aureus
(strain N315) GN=ahpF PE=1 SV=1
Length = 507
Score = 35.0 bits (79), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 110/272 (40%), Gaps = 55/272 (20%)
Query: 52 SSFHSPSFPAFNCLKCPQSHPIIANVVENVKYPFIYSLSDLGNLPDKPHKNIVRL----L 107
SFH +F + C KCP + N++ + +S+ D G + + +NI+ + L
Sbjct: 115 GSFHFETFISLTCQKCPDVVQAL-NLMSVINPNITHSMID-GAVFREESENIMAVPAVFL 172
Query: 108 KGKPFRKPDISVTIQEILEKM----------KKEGKNGLVVDVGANVGMASFAAAVMGFR 157
G+ F +TIQ+IL K+ KE + L+V G G A+ A G R
Sbjct: 173 NGEEFGNG--RMTIQDILSKLGSTADASEFENKEPYDVLIVGGGPASGSAAIYTARKGLR 230
Query: 158 VLSFEPVFENLQRICDGVWFNRVG----------DLVTVYEAAVSDRIGNITFHKLVGRL 207
G+ +R+G + +TV E S+ N+ H + +
Sbjct: 231 T---------------GIVADRIGGQVNDTAGIENFITVKETTGSEFSSNLAAH--IDQY 273
Query: 208 DNSAVSATGAKLAFKSNEEIALQVRSIPLDEVIPEAEPVLLLKIDVQGWEYHVLKGATKL 267
D A++ A K++E I + + + + E++ V++ GW + G +L
Sbjct: 274 DIDAMTGIRATDIEKTDEAIKVTLE----NGAVLESKTVIIAT--GAGWRKLNIPGEEQL 327
Query: 268 LSRKKGESPY----LIYEEDEHLLQASNSSAK 295
+++ P+ L +D ++ NS +
Sbjct: 328 INKGVAFCPHCDGPLFENKDVAVIGGGNSGVE 359
>sp|P66012|AHPF_STAAM Alkyl hydroperoxide reductase subunit F OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=ahpF PE=1 SV=1
Length = 507
Score = 35.0 bits (79), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 110/272 (40%), Gaps = 55/272 (20%)
Query: 52 SSFHSPSFPAFNCLKCPQSHPIIANVVENVKYPFIYSLSDLGNLPDKPHKNIVRL----L 107
SFH +F + C KCP + N++ + +S+ D G + + +NI+ + L
Sbjct: 115 GSFHFETFISLTCQKCPDVVQAL-NLMSVINPNITHSMID-GAVFREESENIMAVPAVFL 172
Query: 108 KGKPFRKPDISVTIQEILEKM----------KKEGKNGLVVDVGANVGMASFAAAVMGFR 157
G+ F +TIQ+IL K+ KE + L+V G G A+ A G R
Sbjct: 173 NGEEFGNG--RMTIQDILSKLGSTADASEFENKEPYDVLIVGGGPASGSAAIYTARKGLR 230
Query: 158 VLSFEPVFENLQRICDGVWFNRVG----------DLVTVYEAAVSDRIGNITFHKLVGRL 207
G+ +R+G + +TV E S+ N+ H + +
Sbjct: 231 T---------------GIVADRIGGQVNDTAGIENFITVKETTGSEFSSNLAAH--IDQY 273
Query: 208 DNSAVSATGAKLAFKSNEEIALQVRSIPLDEVIPEAEPVLLLKIDVQGWEYHVLKGATKL 267
D A++ A K++E I + + + + E++ V++ GW + G +L
Sbjct: 274 DIDAMTGIRATDIEKTDEAIKVTLE----NGAVLESKTVIIAT--GAGWRKLNIPGEEQL 327
Query: 268 LSRKKGESPY----LIYEEDEHLLQASNSSAK 295
+++ P+ L +D ++ NS +
Sbjct: 328 INKGVAFCPHCDGPLFENKDVAVIGGGNSGVE 359
>sp|Q5HIR6|AHPF_STAAC Alkyl hydroperoxide reductase subunit F OS=Staphylococcus aureus
(strain COL) GN=ahpF PE=3 SV=1
Length = 507
Score = 35.0 bits (79), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 110/272 (40%), Gaps = 55/272 (20%)
Query: 52 SSFHSPSFPAFNCLKCPQSHPIIANVVENVKYPFIYSLSDLGNLPDKPHKNIVRL----L 107
SFH +F + C KCP + N++ + +S+ D G + + +NI+ + L
Sbjct: 115 GSFHFETFISLTCQKCPDVVQAL-NLMSVINPNITHSMID-GAVFREESENIMAVPAVFL 172
Query: 108 KGKPFRKPDISVTIQEILEKM----------KKEGKNGLVVDVGANVGMASFAAAVMGFR 157
G+ F +TIQ+IL K+ KE + L+V G G A+ A G R
Sbjct: 173 NGEEFGNG--RMTIQDILSKLGSTADASEFENKEPYDVLIVGGGPASGSAAIYTARKGLR 230
Query: 158 VLSFEPVFENLQRICDGVWFNRVG----------DLVTVYEAAVSDRIGNITFHKLVGRL 207
G+ +R+G + +TV E S+ N+ H + +
Sbjct: 231 T---------------GIVADRIGGQVNDTAGIENFITVKETTGSEFSSNLAAH--IDQY 273
Query: 208 DNSAVSATGAKLAFKSNEEIALQVRSIPLDEVIPEAEPVLLLKIDVQGWEYHVLKGATKL 267
D A++ A K++E I + + + + E++ V++ GW + G +L
Sbjct: 274 DIDAMTGIRATDIEKTDEAIKVTLE----NGAVLESKTVIIAT--GAGWRKLNIPGEEQL 327
Query: 268 LSRKKGESPY----LIYEEDEHLLQASNSSAK 295
+++ P+ L +D ++ NS +
Sbjct: 328 INKGVAFCPHCDGPLFENKDVAVIGGGNSGVE 359
>sp|O05204|AHPF_STAA8 Alkyl hydroperoxide reductase subunit F OS=Staphylococcus aureus
(strain NCTC 8325) GN=ahpF PE=3 SV=1
Length = 507
Score = 35.0 bits (79), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 110/272 (40%), Gaps = 55/272 (20%)
Query: 52 SSFHSPSFPAFNCLKCPQSHPIIANVVENVKYPFIYSLSDLGNLPDKPHKNIVRL----L 107
SFH +F + C KCP + N++ + +S+ D G + + +NI+ + L
Sbjct: 115 GSFHFETFISLTCQKCPDVVQAL-NLMSVINPNITHSMID-GAVFREESENIMAVPAVFL 172
Query: 108 KGKPFRKPDISVTIQEILEKM----------KKEGKNGLVVDVGANVGMASFAAAVMGFR 157
G+ F +TIQ+IL K+ KE + L+V G G A+ A G R
Sbjct: 173 NGEEFGNG--RMTIQDILSKLGSTADASEFENKEPYDVLIVGGGPASGSAAIYTARKGLR 230
Query: 158 VLSFEPVFENLQRICDGVWFNRVG----------DLVTVYEAAVSDRIGNITFHKLVGRL 207
G+ +R+G + +TV E S+ N+ H + +
Sbjct: 231 T---------------GIVADRIGGQVNDTAGIENFITVKETTGSEFSSNLAAH--IDQY 273
Query: 208 DNSAVSATGAKLAFKSNEEIALQVRSIPLDEVIPEAEPVLLLKIDVQGWEYHVLKGATKL 267
D A++ A K++E I + + + + E++ V++ GW + G +L
Sbjct: 274 DIDAMTGIRATDIEKTDEAIKVTLE----NGAVLESKTVIIAT--GAGWRKLNIPGEEQL 327
Query: 268 LSRKKGESPY----LIYEEDEHLLQASNSSAK 295
+++ P+ L +D ++ NS +
Sbjct: 328 INKGVAFCPHCDGPLFENKDVAVIGGGNSGVE 359
>sp|Q96512|PER9_ARATH Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1
Length = 346
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 18 ILLSLLFPCLLLFFIFYFNSHSYNPNPN----PYLSVTSSFHSPSFPAFNCLKCPQSHPI 73
+ +S L P L+LF +F F+ +P + SF+S +P F CPQ+ I
Sbjct: 1 MAISKLIPTLVLFVLFSFDVSVAHPGLGFGWGSNSPIGGSFYSNLYPQFYQFSCPQADEI 60
Query: 74 IANVVE 79
+ V+E
Sbjct: 61 VMTVLE 66
>sp|B0T1G7|PRMA_CAUSK Ribosomal protein L11 methyltransferase OS=Caulobacter sp. (strain
K31) GN=prmA PE=3 SV=1
Length = 288
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 85 FIYSLSDLGNLPDKPHKNIVRLLKGKPFRKPDISVTIQEIL--EKMKKEGKNGLVVDVGA 142
F+Y + D G LP +R+ G F T+ ++ +K+ K K V+DVGA
Sbjct: 101 FVYGMHDRGRLPASTVN--LRIEAGAAFGTGHHGTTVGCLMAYDKLIKARKFKKVLDVGA 158
Query: 143 NVGMASFAAAVMGFRV 158
G+ + AAA G R+
Sbjct: 159 GTGLLAIAAARTGSRI 174
>sp|Q818F1|PRMA_BACCR Ribosomal protein L11 methyltransferase OS=Bacillus cereus (strain
ATCC 14579 / DSM 31) GN=prmA PE=3 SV=1
Length = 312
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 96 PDKPHKNIVRLLKGKPFRK---PDISVTIQEILEKMKKEGKNGLVVDVGANVGMASFAAA 152
P P + I+ L G F P ++ I+ LEK + G N ++DVG G+ S AAA
Sbjct: 138 PSSPDEKIIELDPGMAFGTGTHPTTTMCIRA-LEKTVQPGDN--IIDVGTGSGVLSIAAA 194
Query: 153 VMG---FRVLSFEPVFENLQRICDGVWFNRVGDLVTV 186
+G + +PV ++ V N+ D+V+V
Sbjct: 195 KLGASSVQAYDLDPV--AVESAEMNVRLNKTDDIVSV 229
>sp|B7HCT8|PRMA_BACC4 Ribosomal protein L11 methyltransferase OS=Bacillus cereus (strain
B4264) GN=prmA PE=3 SV=1
Length = 312
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 96 PDKPHKNIVRLLKGKPFRK---PDISVTIQEILEKMKKEGKNGLVVDVGANVGMASFAAA 152
P P + I+ L G F P ++ I+ LEK + G N ++DVG G+ S AAA
Sbjct: 138 PSSPDEKIIELDPGMAFGTGTHPTTTMCIRA-LEKTVQPGDN--IIDVGTGSGVLSIAAA 194
Query: 153 VMG---FRVLSFEPVFENLQRICDGVWFNRVGDLVTV 186
+G + +PV ++ V N+ D+V+V
Sbjct: 195 KLGASSVQAYDLDPV--AVESAEMNVRLNKTDDIVSV 229
>sp|Q730M3|PRMA_BACC1 Ribosomal protein L11 methyltransferase OS=Bacillus cereus (strain
ATCC 10987) GN=prmA PE=3 SV=1
Length = 312
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 96 PDKPHKNIVRLLKGKPFRK---PDISVTIQEILEKMKKEGKNGLVVDVGANVGMASFAAA 152
P P + I+ L G F P ++ I+ LEK ++G ++DVG G+ S AAA
Sbjct: 138 PSSPEEKIIELDPGMAFGTGTHPTTTMCIR-ALEKTVQQGDT--IIDVGTGSGVLSIAAA 194
Query: 153 VMG---FRVLSFEPVFENLQRICDGVWFNRVGDLVTV 186
+G + +PV ++ V N+ D+V+V
Sbjct: 195 KLGASSVQAYDLDPV--AVESAEMNVRLNKTDDIVSV 229
>sp|B8I305|DNAK_CLOCE Chaperone protein DnaK OS=Clostridium cellulolyticum (strain ATCC
35319 / DSM 5812 / JCM 6584 / H10) GN=dnaK PE=3 SV=1
Length = 616
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Query: 73 IIANVVENVKYPFIYSLSDLGNLPDKPHKNIVRLLKGKPFRKPDISVTIQEILEKMKKEG 132
I A++VEN P ++ D G PDK K LL G R P + +++ L K +G
Sbjct: 279 ITADLVENTMVPTRQAMQDAGLTPDKIDK---ILLVGGSTRIPAVQEAVKKYLGKDPFKG 335
Query: 133 KN-GLVVDVGANVGMASFAAAVMGFRVLSFEPVFENLQRICDGVW 176
N V VGA + V G +L P+ L+ + GV+
Sbjct: 336 INPDECVAVGAAIQAGVLTGDVTGLLLLDVTPLSLGLETLG-GVF 379
>sp|O13022|DPY3A_XENLA Dihydropyrimidinase-related protein 3-A OS=Xenopus laevis
GN=dpysl3-a PE=2 SV=2
Length = 571
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 20/89 (22%)
Query: 236 LDEVIPEAEPVLL-------------------LKIDVQGWEYHVLKGATKLLSRKKGESP 276
+D VIPE E L L +D+ W V K + L ++KG +
Sbjct: 105 VDHVIPEPEASLTEAFEKWREWADGKTCCDYSLHVDITHWSDSV-KQEVETLVKQKGVNS 163
Query: 277 YLIYEEDEHLLQASNSSAKEIREFLHSVG 305
+++Y + L Q SN+ EI FL S+G
Sbjct: 164 FMVYMAYKDLYQMSNTELYEIFTFLGSLG 192
>sp|A7GT06|PRMA_BACCN Ribosomal protein L11 methyltransferase OS=Bacillus cereus subsp.
cytotoxis (strain NVH 391-98) GN=prmA PE=3 SV=1
Length = 312
Score = 33.5 bits (75), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 96 PDKPHKNIVRLLKGKPFRK---PDISVTIQEILEKMKKEGKNGLVVDVGANVGMASFAAA 152
P P + I+ L G F P ++ I+ LEK K G V+DVG G+ S AAA
Sbjct: 138 PSSPDEKIIELDPGMAFGTGTHPTTTMCIRA-LEKTVKPGDT--VIDVGTGSGVLSIAAA 194
Query: 153 VMG---FRVLSFEPVFENLQRICDGVWFNRVGDLVTV 186
+G + +PV ++ V N+ D+V+V
Sbjct: 195 KLGAASVQAYDLDPV--AVESAEMNVRLNKTDDVVSV 229
>sp|Q6HES5|PYRB_BACHK Aspartate carbamoyltransferase OS=Bacillus thuringiensis subsp.
konkukian (strain 97-27) GN=pyrB PE=3 SV=1
Length = 304
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 195 IGNITFHKLVGRLDNSAVSATGAKLAFKSNEEIALQVRSI----PLDEVIPEAEPVLLLK 250
+G++ H V R + A++ GA + F S EE + + PLDE++PE + ++LL+
Sbjct: 153 VGDVR-HSRVARSNAEALTKLGATIYFASPEEWKDEDNTFGTYKPLDELVPEVDVMMLLR 211
Query: 251 I 251
+
Sbjct: 212 V 212
>sp|Q636D7|PYRB_BACCZ Aspartate carbamoyltransferase OS=Bacillus cereus (strain ZK /
E33L) GN=pyrB PE=3 SV=1
Length = 304
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 195 IGNITFHKLVGRLDNSAVSATGAKLAFKSNEEIALQVRSI----PLDEVIPEAEPVLLLK 250
+G++ H V R + A++ GA + F S EE + + PLDE++PE + ++LL+
Sbjct: 153 VGDVR-HSRVARSNAEALTKLGATIYFASPEEWKDEDNTFGTYKPLDELVPEVDVMMLLR 211
Query: 251 I 251
+
Sbjct: 212 V 212
>sp|B9IVW6|PYRB_BACCQ Aspartate carbamoyltransferase OS=Bacillus cereus (strain Q1)
GN=pyrB PE=3 SV=1
Length = 304
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 195 IGNITFHKLVGRLDNSAVSATGAKLAFKSNEEIALQVRSI----PLDEVIPEAEPVLLLK 250
+G++ H V R + A++ GA + F S EE + + PLDE++PE + ++LL+
Sbjct: 153 VGDVR-HSRVARSNAEALTKLGATIYFASPEEWKDEDNTFGTYKPLDELVPEVDVMMLLR 211
Query: 251 I 251
+
Sbjct: 212 V 212
>sp|B7HLM3|PYRB_BACC7 Aspartate carbamoyltransferase OS=Bacillus cereus (strain AH187)
GN=pyrB PE=3 SV=1
Length = 304
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 195 IGNITFHKLVGRLDNSAVSATGAKLAFKSNEEIALQVRSI----PLDEVIPEAEPVLLLK 250
+G++ H V R + A++ GA + F S EE + + PLDE++PE + ++LL+
Sbjct: 153 VGDVR-HSRVARSNAEALTKLGATIYFASPEEWKDEDNTFGTYKPLDELVPEVDVMMLLR 211
Query: 251 I 251
+
Sbjct: 212 V 212
>sp|B7H6M5|PYRB_BACC4 Aspartate carbamoyltransferase OS=Bacillus cereus (strain B4264)
GN=pyrB PE=3 SV=1
Length = 304
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 195 IGNITFHKLVGRLDNSAVSATGAKLAFKSNEEIALQVRSI----PLDEVIPEAEPVLLLK 250
+G++ H V R + A++ GA + F S EE + + PLDE++PE + ++LL+
Sbjct: 153 VGDVR-HSRVARSNAEALTKLGATIYFASPEEWKDEDNTFGTYKPLDELVPEVDVMMLLR 211
Query: 251 I 251
+
Sbjct: 212 V 212
>sp|B7JJX6|PYRB_BACC0 Aspartate carbamoyltransferase OS=Bacillus cereus (strain AH820)
GN=pyrB PE=3 SV=1
Length = 304
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 195 IGNITFHKLVGRLDNSAVSATGAKLAFKSNEEIALQVRSI----PLDEVIPEAEPVLLLK 250
+G++ H V R + A++ GA + F S EE + + PLDE++PE + ++LL+
Sbjct: 153 VGDVR-HSRVARSNAEALTKLGATIYFASPEEWKDEDNTFGTYKPLDELVPEVDVMMLLR 211
Query: 251 I 251
+
Sbjct: 212 V 212
>sp|Q81WE9|PYRB_BACAN Aspartate carbamoyltransferase OS=Bacillus anthracis GN=pyrB PE=3
SV=1
Length = 304
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 195 IGNITFHKLVGRLDNSAVSATGAKLAFKSNEEIALQVRSI----PLDEVIPEAEPVLLLK 250
+G++ H V R + A++ GA + F S EE + + PLDE++PE + ++LL+
Sbjct: 153 VGDVR-HSRVARSNAEALTKLGATIYFASPEEWKDEDNTFGTYKPLDELVPEVDVMMLLR 211
Query: 251 I 251
+
Sbjct: 212 V 212
>sp|C3L737|PYRB_BACAC Aspartate carbamoyltransferase OS=Bacillus anthracis (strain CDC
684 / NRRL 3495) GN=pyrB PE=3 SV=1
Length = 304
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 195 IGNITFHKLVGRLDNSAVSATGAKLAFKSNEEIALQVRSI----PLDEVIPEAEPVLLLK 250
+G++ H V R + A++ GA + F S EE + + PLDE++PE + ++LL+
Sbjct: 153 VGDVR-HSRVARSNAEALTKLGATIYFASPEEWKDEDNTFGTYKPLDELVPEVDVMMLLR 211
Query: 251 I 251
+
Sbjct: 212 V 212
>sp|C3P659|PYRB_BACAA Aspartate carbamoyltransferase OS=Bacillus anthracis (strain A0248)
GN=pyrB PE=3 SV=1
Length = 304
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 195 IGNITFHKLVGRLDNSAVSATGAKLAFKSNEEIALQVRSI----PLDEVIPEAEPVLLLK 250
+G++ H V R + A++ GA + F S EE + + PLDE++PE + ++LL+
Sbjct: 153 VGDVR-HSRVARSNAEALTKLGATIYFASPEEWKDEDNTFGTYKPLDELVPEVDVMMLLR 211
Query: 251 I 251
+
Sbjct: 212 V 212
>sp|B7IUP9|PYRB_BACC2 Aspartate carbamoyltransferase OS=Bacillus cereus (strain G9842)
GN=pyrB PE=3 SV=1
Length = 304
Score = 33.1 bits (74), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 14/99 (14%)
Query: 195 IGNITFHKLVGRLDNSAVSATGAKLAFKSNEEIALQVRSI----PLDEVIPEAEPVLLLK 250
+G++ H V R + A++ GA + F S EE + + PLDE++PE + ++LL+
Sbjct: 153 VGDVR-HSRVARSNAEALTKLGATIYFASPEEWKDEDSTFGTYKPLDELVPEVDVMMLLR 211
Query: 251 IDVQGW---------EYHVLKGATKLLSRKKGESPYLIY 280
+ + EYH G T ++ E +++
Sbjct: 212 VQHERHDHYETDIMKEYHERHGLTVEREKRMKEGSIIMH 250
>sp|Q819S0|PYRB_BACCR Aspartate carbamoyltransferase OS=Bacillus cereus (strain ATCC
14579 / DSM 31) GN=pyrB PE=3 SV=1
Length = 301
Score = 33.1 bits (74), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 195 IGNITFHKLVGRLDNSAVSATGAKLAFKSNEEIALQVRSI----PLDEVIPEAEPVLLLK 250
+G++ H V R + A++ GA + F S EE + + PLDE++PE + ++LL+
Sbjct: 150 VGDVR-HSRVARSNAEALTKLGATIYFASPEEWKDEDNTFGTYKPLDELVPEVDVMMLLR 208
Query: 251 I 251
+
Sbjct: 209 V 209
>sp|A0RHR1|PYRB_BACAH Aspartate carbamoyltransferase OS=Bacillus thuringiensis (strain Al
Hakam) GN=pyrB PE=3 SV=1
Length = 306
Score = 33.1 bits (74), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 195 IGNITFHKLVGRLDNSAVSATGAKLAFKSNEEIALQVRSI----PLDEVIPEAEPVLLLK 250
+G++ H V R + A++ GA + F S EE + + PLDE++PE + ++LL+
Sbjct: 155 VGDVR-HSRVARSNAEALTKLGATIYFASPEEWKDEDNTFGTYKPLDELVPEVDVMMLLR 213
Query: 251 I 251
+
Sbjct: 214 V 214
>sp|C1EPQ3|PYRB_BACC3 Aspartate carbamoyltransferase OS=Bacillus cereus (strain 03BB102)
GN=pyrB PE=3 SV=1
Length = 304
Score = 33.1 bits (74), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 195 IGNITFHKLVGRLDNSAVSATGAKLAFKSNEEIALQVRSI----PLDEVIPEAEPVLLLK 250
+G++ H V R + A++ GA + F S EE + + PLDE++PE + ++LL+
Sbjct: 153 VGDVR-HSRVARSNAEALTKLGATIYFASPEEWKDEDNTFGTYKPLDELVPEVDVMMLLR 211
Query: 251 I 251
+
Sbjct: 212 V 212
>sp|Q732I0|PYRB_BACC1 Aspartate carbamoyltransferase OS=Bacillus cereus (strain ATCC
10987) GN=pyrB PE=3 SV=1
Length = 304
Score = 33.1 bits (74), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 195 IGNITFHKLVGRLDNSAVSATGAKLAFKSNEEIALQVRSI----PLDEVIPEAEPVLLLK 250
+G++ H V R + A++ GA + F S EE + + PLDE++PE + ++LL+
Sbjct: 153 VGDVR-HSRVARSNAEALTKLGATIYFASPEEWKDEDNTFGTYKPLDELVPEVDVMMLLR 211
Query: 251 I 251
+
Sbjct: 212 V 212
>sp|C4L423|PRMA_EXISA Ribosomal protein L11 methyltransferase OS=Exiguobacterium sp.
(strain ATCC BAA-1283 / AT1b) GN=prmA PE=3 SV=1
Length = 312
Score = 32.7 bits (73), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 11/95 (11%)
Query: 98 KPHKNIVRLLKGKPFRK---PDISVTIQEILEKMKKEGKNGLVVDVGANVGMASFAAAVM 154
+P +N++ L G F P + IQ I E +EG + V+DVG G+ S AAA +
Sbjct: 140 QPEENVILLDPGMAFGTGTHPTTMLCIQAI-ENYIREGDH--VIDVGTGSGVLSIAAAKL 196
Query: 155 G---FRVLSFEPVFENLQRICDGVWFNRVGDLVTV 186
G + L + V R V N VG+LV V
Sbjct: 197 GAASVKALDLDSVAVESAR--QNVETNGVGELVQV 229
>sp|A7GRL4|PYRB_BACCN Aspartate carbamoyltransferase OS=Bacillus cereus subsp. cytotoxis
(strain NVH 391-98) GN=pyrB PE=3 SV=1
Length = 304
Score = 32.7 bits (73), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 195 IGNITFHKLVGRLDNSAVSATGAKLAFKSNEEIALQVRSI----PLDEVIPEAEPVLLLK 250
+G+I H V R + A++ GA + F S EE + + LDE+IPE + ++LL+
Sbjct: 153 VGDIR-HSRVARSNAEALTKLGATIYFASPEEWKDETNTFGTYRSLDELIPEVDVMMLLR 211
Query: 251 I 251
+
Sbjct: 212 V 212
>sp|Q5DTJ9|MYPN_MOUSE Myopalladin OS=Mus musculus GN=Mypn PE=2 SV=2
Length = 1315
Score = 32.7 bits (73), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 53/131 (40%), Gaps = 23/131 (17%)
Query: 58 SFPAFNCLKCPQSHPIIANVVENVKYPFIYSLSDLGNLPDKPHKNIVRLLKGKPFRKPDI 117
S P+ N + P + ++ P + S L +LP P N + L K P
Sbjct: 796 SIPSGNQFQPHCVSPTPVSPTGRIQNPVAFLSSVLPSLPSIPPTNAMGLPKSAP------ 849
Query: 118 SVTIQEILEKMKK-----------EGKNGLVVDVGANVGMASFAAAVMGFRVLSFEPVFE 166
SV Q +++K K E KN +++D+G V + +++ SFE
Sbjct: 850 SVPSQGLMKKTTKAPQAVSDDYIRETKNSVILDLGKKVNFGDVRSHQQEYKISSFE---- 905
Query: 167 NLQRICDGVWF 177
QR+ + + F
Sbjct: 906 --QRLMNEIEF 914
>sp|B7HPL1|PRMA_BACC7 Ribosomal protein L11 methyltransferase OS=Bacillus cereus (strain
AH187) GN=prmA PE=3 SV=1
Length = 312
Score = 32.3 bits (72), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 96 PDKPHKNIVRLLKGKPFRK---PDISVTIQEILEKMKKEGKNGLVVDVGANVGMASFAAA 152
P P + I+ L G F P ++ I+ LEK + G ++DVG G+ S AAA
Sbjct: 138 PSSPEEKIIELDPGMAFGTGTHPTTTMCIRA-LEKTVQPGNT--IIDVGTGSGVLSIAAA 194
Query: 153 VMG---FRVLSFEPVFENLQRICDGVWFNRVGDLVTV 186
+G + +PV ++ V N+ D+V+V
Sbjct: 195 KLGASSVQAYDLDPV--AVESAEMNVRLNKTDDIVSV 229
>sp|Q6ICH7|ASPH2_HUMAN Aspartate beta-hydroxylase domain-containing protein 2 OS=Homo
sapiens GN=ASPHD2 PE=2 SV=1
Length = 369
Score = 32.0 bits (71), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 20/107 (18%)
Query: 26 CLLLFFIFYFNSHSYNPNPNPYLSVTSSFHSPSFPAFN----------CLKCPQSHPIIA 75
CLL+ F++Y H P PY+SV S + C++C + +
Sbjct: 66 CLLVLFVWYC-YHVGREQPRPYVSVNSLMQAADANGLQNGYVYCQSPECVRCTHNEGLNQ 124
Query: 76 NVVENVK-YPFIYSLSDLGNLPDKPHKNIV---RLLKGKP-FRKPDI 117
+ N++ Y YS S +G + HK I R L +P +KP++
Sbjct: 125 KLYHNLQEYAKRYSWSGMGRI----HKGIREQGRYLNSRPSIQKPEV 167
>sp|P13568|MDR_PLAFF Multidrug resistance protein OS=Plasmodium falciparum (isolate FC27
/ Papua New Guinea) GN=MDR1 PE=3 SV=1
Length = 1419
Score = 31.6 bits (70), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 80 NVKYPFIYSLSDLGNLPDKPHKNIVRLLKGKPFRKPDISVTIQEILEKMKKEG---KNGL 136
N+KY +YSL DL + + +N + K F S+T E+LE MKKE K+
Sbjct: 474 NIKYS-LYSLKDLEAMENYYEENTNDTYENKNFSLISNSMTSNELLE-MKKEYQTIKDSD 531
Query: 137 VVDVGANVGMASFAAAV 153
VVDV V + F +++
Sbjct: 532 VVDVSKKVLIHDFVSSL 548
>sp|Q640K6|DPY3B_XENLA Dihydropyrimidinase-related protein 3-B OS=Xenopus laevis
GN=dpysl3-b PE=2 SV=1
Length = 571
Score = 31.6 bits (70), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 20/89 (22%)
Query: 236 LDEVIPEAEPVLL-------------------LKIDVQGWEYHVLKGATKLLSRKKGESP 276
+D VIPE E L L +D+ W V K + L ++KG +
Sbjct: 105 VDHVIPEPEASLTEALEKWREWADGKTCCDYSLHVDITHWSDSV-KQEVETLVKQKGVNS 163
Query: 277 YLIYEEDEHLLQASNSSAKEIREFLHSVG 305
+++Y + + Q SN+ EI FL +G
Sbjct: 164 FMVYMAYKDMYQMSNTELYEIFTFLGGLG 192
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,183,086
Number of Sequences: 539616
Number of extensions: 5084074
Number of successful extensions: 14992
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 14985
Number of HSP's gapped (non-prelim): 59
length of query: 321
length of database: 191,569,459
effective HSP length: 117
effective length of query: 204
effective length of database: 128,434,387
effective search space: 26200614948
effective search space used: 26200614948
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)