Query 020831
Match_columns 321
No_of_seqs 251 out of 693
Neff 4.0
Searched_HMMs 13730
Date Mon Mar 25 08:50:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020831.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/020831hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wj2a_ g.79.1.1 (A:) WRKY DNA 100.0 1.5E-34 1.1E-38 222.0 5.5 65 153-218 7-71 (71)
2 d1wrda1 a.7.8.1 (A:215-307) Ta 77.0 3.2 0.00023 30.7 6.6 43 45-87 2-60 (93)
3 d2oa5a1 d.362.1.1 (A:7-102) Un 62.1 2.6 0.00019 32.3 3.1 24 46-69 4-27 (96)
4 d1o3xa_ a.7.8.1 (A:) ADP-ribos 44.3 30 0.0022 25.9 6.8 46 42-87 16-78 (112)
5 d2p90a1 c.56.8.1 (A:6-274) Hyp 42.4 12 0.0009 31.4 4.7 34 44-77 231-264 (269)
6 d1wmib1 a.137.13.1 (B:7-67) Hy 37.9 9.2 0.00067 26.2 2.4 20 49-68 3-22 (61)
7 d1fxkc_ a.2.5.1 (C:) Prefoldin 30.7 64 0.0047 23.7 6.7 44 44-87 88-131 (133)
8 d2azeb1 e.63.1.2 (B:201-301) T 25.7 51 0.0037 24.5 5.2 28 46-73 3-30 (101)
9 d1fxka_ a.2.5.1 (A:) Prefoldin 20.6 78 0.0057 22.8 5.3 43 43-85 64-106 (107)
10 d2azea1 e.63.1.1 (A:199-346) T 17.9 1.2E+02 0.0086 24.2 6.1 35 45-79 3-37 (148)
No 1
>d1wj2a_ g.79.1.1 (A:) WRKY DNA-binding protein 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=100.00 E-value=1.5e-34 Score=221.95 Aligned_cols=65 Identities=55% Similarity=1.137 Sum_probs=61.8
Q ss_pred cccccCCccccccCccccCCCCCCcccccccCCCCCccccceeecCCCCCEEEEEeeccCCCCCCC
Q 020831 153 TLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPT 218 (321)
Q Consensus 153 ~~~~~DGy~WRKYGQK~ikgnp~PRsYYrCs~~~~C~akKqVqr~~~d~~~~~~TY~G~HnH~~p~ 218 (321)
..+++|||+|||||||.|+|+++||+||||++ ++|+|+|+|||+++|+.+++|||+|+|||+.|+
T Consensus 7 ~~~~dDGy~WRKYGQK~ikgs~~pRsYYrCt~-~~C~a~K~Vqr~~~d~~~~~vtY~G~H~h~~Ps 71 (71)
T d1wj2a_ 7 VDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTT-PGCGVRKHVERAATDPKAVVTTYEGKHNHDLPA 71 (71)
T ss_dssp CCCCCSSSCBCCCEEECCTTCSSCEEEEEEEC-SSCEEEEEEEEETTTTSEEEEEEESCCSSCCCC
T ss_pred cccCCCCcEecccCceeccCCCCceEEEEccc-cCCCCcceEEEEcCCCCEEEEEEeeEeCCCCCC
Confidence 35789999999999999999999999999998 699999999999999999999999999998874
No 2
>d1wrda1 a.7.8.1 (A:215-307) Target of Myb protein 1, TOM1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=76.99 E-value=3.2 Score=30.66 Aligned_cols=43 Identities=26% Similarity=0.449 Sum_probs=35.2
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHHH----------------HHHhHHHHHHHHHHHhhh
Q 020831 45 ETGILVEELNRISTENKKLNEMLSI----------------LCKNYNNLRQQYMDLMNK 87 (321)
Q Consensus 45 ~~~~L~~EL~Rv~eENkrL~~mL~~----------------v~~nY~aLq~ql~~~~~~ 87 (321)
.++.|..||..|+.--+-|.+||.. ++..|..+|..|+.++..
T Consensus 2 ~~~kl~~eLe~v~~n~~lL~eML~~~~p~~~~~~d~eli~eL~~~C~~~q~~i~~li~~ 60 (93)
T d1wrda1 2 QIGKLRSELEMVSGNVRVMSEMLTELVPTQAEPADLELLQELNRTCRAMQQRVLELIPQ 60 (93)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHSCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4577999999999999999999975 466777788888888765
No 3
>d2oa5a1 d.362.1.1 (A:7-102) Uncharacterized protein BQLF2 {Murid herpesvirus 4 [TaxId: 33708]}
Probab=62.12 E-value=2.6 Score=32.28 Aligned_cols=24 Identities=29% Similarity=0.425 Sum_probs=19.3
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHH
Q 020831 46 TGILVEELNRISTENKKLNEMLSI 69 (321)
Q Consensus 46 ~~~L~~EL~Rv~eENkrL~~mL~~ 69 (321)
++.|.+||.|++-||+.|+.-|.+
T Consensus 4 ~EeLaaeL~rL~~ENk~LKkkl~~ 27 (96)
T d2oa5a1 4 YEEMVKEVERLKLENKTLKQKVKS 27 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 356999999999999999976654
No 4
>d1o3xa_ a.7.8.1 (A:) ADP-ribosylation factor binding protein Gga1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.34 E-value=30 Score=25.95 Aligned_cols=46 Identities=17% Similarity=0.277 Sum_probs=34.0
Q ss_pred hhhhHHHHHHHHHhHHHHHHHHHHHHHH-----------------HHHhHHHHHHHHHHHhhh
Q 020831 42 VKQETGILVEELNRISTENKKLNEMLSI-----------------LCKNYNNLRQQYMDLMNK 87 (321)
Q Consensus 42 k~e~~~~L~~EL~Rv~eENkrL~~mL~~-----------------v~~nY~aLq~ql~~~~~~ 87 (321)
+.+.++.+..||..|+.--+-|.+||.. ++..|.++|-.|+.++..
T Consensus 16 ~~e~~~k~~~eLe~v~~n~~lL~eML~~~~~~~~~~~~~~ell~eL~~~c~~~qp~i~~li~~ 78 (112)
T d1o3xa_ 16 RMEKISKRVNAIEEVNNNVKLLTEMVMSHSQGGAAAGSSEDLMKELYQRCERMRPTLFRLASD 78 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3345567788999999999999999964 344566677777777643
No 5
>d2p90a1 c.56.8.1 (A:6-274) Hypothetical protein Cgl1923 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=42.39 E-value=12 Score=31.44 Aligned_cols=34 Identities=12% Similarity=0.291 Sum_probs=30.2
Q ss_pred hhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHH
Q 020831 44 QETGILVEELNRISTENKKLNEMLSILCKNYNNL 77 (321)
Q Consensus 44 e~~~~L~~EL~Rv~eENkrL~~mL~~v~~nY~aL 77 (321)
++++..+++|+++-++|..|.+|++++.+.|.+-
T Consensus 231 e~Ae~~e~~i~~l~e~~~e~~~~v~~LE~~yD~~ 264 (269)
T d2p90a1 231 RDAEKVHRQLMEQTEESSEIQRVVGALEQQYDSE 264 (269)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCHHHHHHHHHHHHhHhhh
Confidence 4567899999999999999999999999999763
No 6
>d1wmib1 a.137.13.1 (B:7-67) Hypothetical protein PHS014 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=37.87 E-value=9.2 Score=26.21 Aligned_cols=20 Identities=35% Similarity=0.629 Sum_probs=17.1
Q ss_pred HHHHHHhHHHHHHHHHHHHH
Q 020831 49 LVEELNRISTENKKLNEMLS 68 (321)
Q Consensus 49 L~~EL~Rv~eENkrL~~mL~ 68 (321)
+-.||.|++-|-+||..||-
T Consensus 3 vlkelerlkveiqrleamlm 22 (61)
T d1wmib1 3 VLKELERLKVEIQRLEAMLM 22 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHhC
Confidence 45689999999999999983
No 7
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=30.72 E-value=64 Score=23.74 Aligned_cols=44 Identities=16% Similarity=0.197 Sum_probs=37.7
Q ss_pred hhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhh
Q 020831 44 QETGILVEELNRISTENKKLNEMLSILCKNYNNLRQQYMDLMNK 87 (321)
Q Consensus 44 e~~~~L~~EL~Rv~eENkrL~~mL~~v~~nY~aLq~ql~~~~~~ 87 (321)
+....|..-+..+....++|...+..+...+..|+..+..++++
T Consensus 88 eA~~~l~~ri~~l~~~~~~l~~~~~~~~~~i~~l~~~~~~l~~a 131 (133)
T d1fxkc_ 88 DAMESIKSQKNELESTLQKMGENLRAITDIMMKLSPQAEELLAA 131 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34467888888899999999999999999999999999888764
No 8
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.73 E-value=51 Score=24.50 Aligned_cols=28 Identities=14% Similarity=0.364 Sum_probs=22.8
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHh
Q 020831 46 TGILVEELNRISTENKKLNEMLSILCKN 73 (321)
Q Consensus 46 ~~~L~~EL~Rv~eENkrL~~mL~~v~~n 73 (321)
+..|++||..+.++-++|-+++..+...
T Consensus 3 ~~~L~~El~~L~~~E~~LD~li~~~~~~ 30 (101)
T d2azeb1 3 LEGLTQDLRQLQESEQQLDHLMNICTTQ 30 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3569999999999999999888766544
No 9
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=20.65 E-value=78 Score=22.83 Aligned_cols=43 Identities=16% Similarity=0.226 Sum_probs=35.2
Q ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Q 020831 43 KQETGILVEELNRISTENKKLNEMLSILCKNYNNLRQQYMDLM 85 (321)
Q Consensus 43 ~e~~~~L~~EL~Rv~eENkrL~~mL~~v~~nY~aLq~ql~~~~ 85 (321)
++-...|.+.+.-+..+-++|..-+..+.+.+..|+..|..++
T Consensus 64 ~e~~~~l~~~~e~l~~~i~~l~~q~~~l~~~l~~~~~~l~~~~ 106 (107)
T d1fxka_ 64 DELTEELQEKLETLQLREKTIERQEERVMKKLQEMQVNIQEAM 106 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333568888888899999999999999999999999887664
No 10
>d2azea1 e.63.1.1 (A:199-346) Transcription factor DP-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.95 E-value=1.2e+02 Score=24.16 Aligned_cols=35 Identities=20% Similarity=0.054 Sum_probs=28.4
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHH
Q 020831 45 ETGILVEELNRISTENKKLNEMLSILCKNYNNLRQ 79 (321)
Q Consensus 45 ~~~~L~~EL~Rv~eENkrL~~mL~~v~~nY~aLq~ 79 (321)
|...|++|..+..+.-++-+..|..+...+.+++.
T Consensus 3 e~~~Le~E~~~~~erI~~K~~~LqeLi~Q~iafkn 37 (148)
T d2azea1 3 ECQNLEVERQRRLERIKQKQSQLQELILQQIAFKN 37 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44678889888888888888888888888877774
Done!