Query 020832
Match_columns 321
No_of_seqs 114 out of 195
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 08:50:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020832.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020832hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lpz_A GET4 (YOR164C homolog); 100.0 2E-89 6.7E-94 656.2 31.9 281 11-319 9-313 (336)
2 2wpv_A GET4, UPF0363 protein Y 100.0 5.6E-87 1.9E-91 635.7 29.4 276 13-319 12-309 (312)
3 2ifu_A Gamma-SNAP; membrane fu 98.2 0.00025 8.6E-09 64.8 20.1 245 27-297 29-274 (307)
4 4b4t_Q 26S proteasome regulato 98.1 0.0011 3.6E-08 62.1 23.6 252 17-297 7-338 (434)
5 1qqe_A Vesicular transport pro 97.9 0.00066 2.3E-08 61.5 17.6 249 29-301 32-284 (292)
6 3edt_B KLC 2, kinesin light ch 96.9 0.15 5.2E-06 43.3 21.8 246 24-306 11-267 (283)
7 2ifu_A Gamma-SNAP; membrane fu 96.9 0.061 2.1E-06 48.6 17.3 177 26-244 3-187 (307)
8 3nf1_A KLC 1, kinesin light ch 96.8 0.23 7.9E-06 43.0 22.1 256 10-305 22-292 (311)
9 2y4t_A DNAJ homolog subfamily 96.4 0.55 1.9E-05 43.4 20.6 134 158-304 175-342 (450)
10 3txn_A 26S proteasome regulato 96.2 0.089 3E-06 51.1 14.6 208 57-295 22-296 (394)
11 3sf4_A G-protein-signaling mod 96.0 0.61 2.1E-05 42.0 18.7 186 17-244 12-219 (406)
12 1qqe_A Vesicular transport pro 96.0 0.79 2.7E-05 40.8 22.2 152 49-241 32-187 (292)
13 3ro3_A PINS homolog, G-protein 96.0 0.071 2.4E-06 41.1 10.5 136 22-187 17-153 (164)
14 3gw4_A Uncharacterized protein 95.9 0.19 6.5E-06 41.0 13.3 176 24-244 2-179 (203)
15 3uq3_A Heat shock protein STI1 95.7 0.34 1.2E-05 40.6 14.7 152 139-305 58-221 (258)
16 3ulq_A Response regulator aspa 95.7 1.3 4.3E-05 40.6 20.1 93 139-244 163-256 (383)
17 3q15_A PSP28, response regulat 95.7 1.3 4.4E-05 40.6 20.6 149 139-306 202-351 (378)
18 3q15_A PSP28, response regulat 95.6 1.2 4.1E-05 40.8 18.9 148 139-305 161-314 (378)
19 3ro2_A PINS homolog, G-protein 95.5 1.1 3.8E-05 38.6 18.0 184 19-244 10-215 (338)
20 3ulq_A Response regulator aspa 95.4 1.6 5.4E-05 39.9 23.0 149 139-306 204-354 (383)
21 3ro2_A PINS homolog, G-protein 95.3 1.2 4.1E-05 38.3 22.2 200 25-244 54-255 (338)
22 3edt_B KLC 2, kinesin light ch 95.3 0.89 3.1E-05 38.3 15.9 47 139-188 147-194 (283)
23 2xpi_A Anaphase-promoting comp 95.3 2.2 7.7E-05 40.9 24.9 22 222-243 485-506 (597)
24 4a1s_A PINS, partner of inscut 95.2 1.8 6.2E-05 39.3 20.5 92 139-243 203-294 (411)
25 3uq3_A Heat shock protein STI1 94.8 1.5 5.3E-05 36.5 21.9 66 158-241 137-202 (258)
26 1w3b_A UDP-N-acetylglucosamine 94.6 2.5 8.5E-05 38.3 25.1 27 158-187 235-261 (388)
27 3fp2_A TPR repeat-containing p 94.6 2 7E-05 40.4 17.9 97 208-305 375-476 (537)
28 4a1s_A PINS, partner of inscut 94.5 2.7 9.2E-05 38.1 19.5 182 22-244 56-255 (411)
29 3ro3_A PINS homolog, G-protein 94.5 1.2 4E-05 33.9 15.5 156 28-242 3-159 (164)
30 3mkr_A Coatomer subunit epsilo 94.5 2.6 8.8E-05 37.8 21.4 133 158-305 99-248 (291)
31 3hym_B Cell division cycle pro 94.3 2.4 8.1E-05 36.8 21.2 91 208-304 190-283 (330)
32 2xpi_A Anaphase-promoting comp 94.3 3.9 0.00013 39.1 22.1 21 221-241 450-470 (597)
33 3sf4_A G-protein-signaling mod 94.1 3 0.0001 37.3 21.4 92 139-244 167-259 (406)
34 3gw4_A Uncharacterized protein 94.1 0.32 1.1E-05 39.5 9.7 45 139-187 127-171 (203)
35 3ieg_A DNAJ homolog subfamily 94.0 2.9 9.9E-05 36.5 23.0 135 158-305 152-320 (359)
36 4eqf_A PEX5-related protein; a 93.6 2.8 9.5E-05 37.5 16.0 222 17-304 68-294 (365)
37 3vtx_A MAMA; tetratricopeptide 93.5 2.4 8.1E-05 34.0 17.4 68 158-243 105-172 (184)
38 2qfc_A PLCR protein; TPR, HTH, 93.5 3.6 0.00012 36.2 16.2 88 139-239 175-264 (293)
39 3cv0_A Peroxisome targeting si 92.8 4.3 0.00015 35.0 23.6 248 15-306 22-301 (327)
40 2q7f_A YRRB protein; TPR, prot 92.8 3 0.0001 34.4 13.9 25 159-186 124-148 (243)
41 3u4t_A TPR repeat-containing p 92.7 4.1 0.00014 34.4 21.0 164 19-241 8-171 (272)
42 4eqf_A PEX5-related protein; a 92.2 3.7 0.00012 36.7 14.5 37 208-245 278-314 (365)
43 3as5_A MAMA; tetratricopeptide 92.1 3.4 0.00012 32.1 14.4 80 139-243 96-175 (186)
44 1w3b_A UDP-N-acetylglucosamine 91.9 7 0.00024 35.2 22.9 118 158-304 269-386 (388)
45 1xnf_A Lipoprotein NLPI; TPR, 91.3 5.8 0.0002 33.3 16.8 208 27-305 18-229 (275)
46 2gw1_A Mitochondrial precursor 91.2 9.4 0.00032 35.3 22.8 233 27-305 202-463 (514)
47 4gco_A Protein STI-1; structur 90.8 2.8 9.5E-05 32.5 10.8 111 161-300 14-124 (126)
48 3u3w_A Transcriptional activat 90.6 8.2 0.00028 33.8 15.9 91 139-243 175-268 (293)
49 3u3w_A Transcriptional activat 90.5 6.6 0.00023 34.4 14.2 130 26-187 127-261 (293)
50 4i17_A Hypothetical protein; T 90.3 6.9 0.00024 32.4 15.3 134 139-304 27-166 (228)
51 4abn_A Tetratricopeptide repea 90.2 6.6 0.00022 37.7 14.9 29 274-302 275-303 (474)
52 4ga2_A E3 SUMO-protein ligase 90.1 1.6 5.3E-05 34.9 8.9 65 159-241 30-94 (150)
53 2qfc_A PLCR protein; TPR, HTH, 89.9 1.7 5.8E-05 38.4 9.7 143 15-187 76-261 (293)
54 2fo7_A Synthetic consensus TPR 89.6 4.6 0.00016 29.3 11.5 26 159-187 102-127 (136)
55 3nf1_A KLC 1, kinesin light ch 89.4 9.2 0.00031 32.5 18.3 48 139-189 173-221 (311)
56 1fch_A Peroxisomal targeting s 89.4 11 0.00037 33.3 15.7 144 139-305 118-299 (368)
57 1xi4_A Clathrin heavy chain; a 89.3 14 0.00049 41.6 18.0 54 23-76 1058-1127(1630)
58 2lni_A Stress-induced-phosphop 89.3 4.7 0.00016 29.6 10.6 118 157-303 13-130 (133)
59 1fch_A Peroxisomal targeting s 89.0 11 0.00039 33.1 23.9 80 139-241 201-280 (368)
60 1elr_A TPR2A-domain of HOP; HO 88.9 2.2 7.6E-05 31.3 8.4 46 139-187 58-103 (131)
61 1xi4_A Clathrin heavy chain; a 88.1 8.5 0.00029 43.4 15.2 149 36-199 987-1141(1630)
62 4gco_A Protein STI-1; structur 87.9 4.8 0.00016 31.1 10.1 91 36-187 15-105 (126)
63 4gcn_A Protein STI-1; structur 87.5 7.5 0.00026 29.8 11.0 114 161-296 9-124 (127)
64 2r5s_A Uncharacterized protein 87.2 10 0.00035 30.4 12.4 126 13-187 5-132 (176)
65 3as5_A MAMA; tetratricopeptide 86.8 9.2 0.00031 29.5 12.7 118 157-305 39-158 (186)
66 3sz7_A HSC70 cochaperone (SGT) 86.7 1.8 6E-05 34.5 7.0 67 157-241 8-74 (164)
67 3qky_A Outer membrane assembly 85.9 15 0.00052 31.1 17.5 69 13-84 14-82 (261)
68 2ho1_A Type 4 fimbrial biogene 85.8 14 0.00048 30.6 17.8 65 158-240 139-203 (252)
69 2y4t_A DNAJ homolog subfamily 85.1 22 0.00075 32.3 27.5 138 139-299 197-371 (450)
70 2fbn_A 70 kDa peptidylprolyl i 85.1 6.8 0.00023 32.0 10.1 110 33-187 37-146 (198)
71 4b4t_Q 26S proteasome regulato 84.9 6.1 0.00021 36.1 10.6 132 27-187 108-240 (434)
72 2yhc_A BAMD, UPF0169 lipoprote 84.9 16 0.00055 30.5 16.1 66 16-84 6-71 (225)
73 1hz4_A MALT regulatory protein 84.2 11 0.00037 33.8 11.8 44 139-187 155-198 (373)
74 3mv2_B Coatomer subunit epsilo 84.0 26 0.00088 32.5 14.5 95 142-243 116-242 (310)
75 2ho1_A Type 4 fimbrial biogene 83.0 19 0.00064 29.8 21.4 133 139-305 91-223 (252)
76 2vq2_A PILW, putative fimbrial 82.8 17 0.00057 29.1 21.6 162 21-241 15-176 (225)
77 2vq2_A PILW, putative fimbrial 82.5 17 0.00059 29.1 16.4 79 139-241 133-211 (225)
78 3n71_A Histone lysine methyltr 82.1 31 0.001 33.8 14.9 138 19-188 314-460 (490)
79 3sz7_A HSC70 cochaperone (SGT) 81.9 12 0.00042 29.3 10.1 39 139-187 65-103 (164)
80 4abn_A Tetratricopeptide repea 81.5 27 0.00094 33.2 14.1 140 157-306 99-273 (474)
81 2vyi_A SGTA protein; chaperone 81.4 10 0.00035 27.3 8.9 115 159-304 11-127 (131)
82 4gcn_A Protein STI-1; structur 81.3 16 0.00055 27.9 11.4 101 33-187 7-107 (127)
83 1na0_A Designed protein CTPR3; 81.0 13 0.00043 26.5 10.1 116 158-302 7-122 (125)
84 3ieg_A DNAJ homolog subfamily 80.9 26 0.0009 30.1 26.3 130 158-304 186-353 (359)
85 2c2l_A CHIP, carboxy terminus 80.7 18 0.00062 31.7 11.7 28 158-188 70-97 (281)
86 3upv_A Heat shock protein STI1 80.5 11 0.00038 28.0 8.9 82 139-245 24-105 (126)
87 2xcb_A PCRH, regulatory protei 80.0 16 0.00054 28.1 9.9 39 139-187 72-110 (142)
88 3mv2_B Coatomer subunit epsilo 80.0 38 0.0013 31.3 15.9 62 20-88 88-150 (310)
89 3cv0_A Peroxisome targeting si 80.0 27 0.00093 29.7 18.0 84 208-305 169-254 (327)
90 3rkv_A Putative peptidylprolyl 79.9 20 0.00067 28.0 11.6 122 159-301 10-142 (162)
91 2q7f_A YRRB protein; TPR, prot 79.5 23 0.00077 28.9 11.3 22 22-43 65-86 (243)
92 3q49_B STIP1 homology and U bo 79.5 16 0.00055 27.1 9.6 40 139-188 63-102 (137)
93 2xm6_A Protein corresponding t 78.7 42 0.0014 31.6 14.3 43 141-188 346-392 (490)
94 4gyw_A UDP-N-acetylglucosamine 78.3 34 0.0012 35.2 14.4 131 139-305 29-159 (723)
95 3mkr_A Coatomer subunit epsilo 77.6 37 0.0013 29.9 23.2 90 143-241 118-229 (291)
96 3gyz_A Chaperone protein IPGC; 77.3 18 0.0006 29.2 9.7 122 13-187 7-128 (151)
97 3hym_B Cell division cycle pro 76.5 35 0.0012 29.1 21.2 122 159-304 192-317 (330)
98 3ma5_A Tetratricopeptide repea 76.5 19 0.00065 26.1 9.0 68 158-243 5-72 (100)
99 4b4t_P 26S proteasome regulato 76.5 56 0.0019 31.4 15.8 69 159-239 136-204 (445)
100 2gw1_A Mitochondrial precursor 76.4 46 0.0016 30.5 19.0 93 209-306 184-285 (514)
101 4ga2_A E3 SUMO-protein ligase 76.3 11 0.00039 29.6 8.2 111 13-186 12-122 (150)
102 2vgx_A Chaperone SYCD; alterna 76.1 23 0.00078 27.8 10.0 39 139-187 75-113 (148)
103 2vsy_A XCC0866; transferase, g 76.1 28 0.00097 33.5 12.5 27 158-187 21-47 (568)
104 3gyz_A Chaperone protein IPGC; 76.0 20 0.00068 28.8 9.7 78 139-241 56-133 (151)
105 3e4b_A ALGK; tetratricopeptide 75.7 54 0.0019 30.9 16.4 43 143-188 304-347 (452)
106 3qky_A Outer membrane assembly 74.4 38 0.0013 28.5 13.9 120 160-304 52-198 (261)
107 2e2e_A Formate-dependent nitri 74.1 30 0.001 27.2 12.7 39 139-187 101-139 (177)
108 4gyw_A UDP-N-acetylglucosamine 73.8 84 0.0029 32.2 17.8 116 139-284 63-179 (723)
109 4b4t_P 26S proteasome regulato 73.7 56 0.0019 31.4 13.8 112 158-289 212-327 (445)
110 2pl2_A Hypothetical conserved 73.3 38 0.0013 28.0 17.9 77 139-241 104-180 (217)
111 2r5s_A Uncharacterized protein 73.1 23 0.0008 28.1 9.5 29 158-189 38-66 (176)
112 4g1t_A Interferon-induced prot 72.0 59 0.002 29.7 20.0 52 13-64 30-81 (472)
113 2kck_A TPR repeat; tetratricop 71.4 12 0.00042 26.2 6.6 42 139-188 60-102 (112)
114 3u4t_A TPR repeat-containing p 71.2 44 0.0015 27.8 19.0 244 13-301 18-265 (272)
115 3upv_A Heat shock protein STI1 70.6 29 0.001 25.5 10.8 112 160-300 4-121 (126)
116 2pzi_A Probable serine/threoni 70.1 24 0.00082 35.5 10.6 84 139-241 411-496 (681)
117 1ihg_A Cyclophilin 40; ppiase 69.9 28 0.00094 32.3 10.3 111 32-187 221-331 (370)
118 1hz4_A MALT regulatory protein 68.7 63 0.0021 28.6 18.4 134 24-187 24-159 (373)
119 1ihg_A Cyclophilin 40; ppiase 68.6 48 0.0016 30.7 11.7 124 22-186 231-364 (370)
120 2pl2_A Hypothetical conserved 68.3 50 0.0017 27.3 13.8 124 159-306 4-133 (217)
121 1elr_A TPR2A-domain of HOP; HO 68.2 30 0.001 24.7 9.8 66 160-243 4-69 (131)
122 3rkv_A Putative peptidylprolyl 68.1 40 0.0014 26.1 11.9 112 31-187 8-121 (162)
123 1na3_A Designed protein CTPR2; 68.0 25 0.00084 23.9 7.5 67 157-241 6-72 (91)
124 2v5f_A Prolyl 4-hydroxylase su 67.8 9.9 0.00034 28.3 5.6 46 139-187 25-70 (104)
125 2fbn_A 70 kDa peptidylprolyl i 67.4 32 0.0011 27.7 9.2 121 22-183 46-176 (198)
126 3q49_B STIP1 homology and U bo 67.3 35 0.0012 25.1 10.0 66 158-241 7-72 (137)
127 3k9i_A BH0479 protein; putativ 67.1 25 0.00086 25.8 7.8 82 139-242 10-91 (117)
128 3vtx_A MAMA; tetratricopeptide 66.8 44 0.0015 26.2 15.4 103 158-290 71-174 (184)
129 3urz_A Uncharacterized protein 65.5 55 0.0019 26.8 12.6 128 159-303 3-134 (208)
130 3e4b_A ALGK; tetratricopeptide 64.1 69 0.0024 30.1 12.0 29 271-302 231-259 (452)
131 2yhc_A BAMD, UPF0169 lipoprote 63.4 63 0.0021 26.7 12.8 70 159-243 3-72 (225)
132 2kat_A Uncharacterized protein 63.0 39 0.0013 24.4 8.2 68 158-243 17-84 (115)
133 1hh8_A P67PHOX, NCF-2, neutrop 62.7 57 0.002 26.0 11.9 26 159-187 120-145 (213)
134 2pzi_A Probable serine/threoni 62.4 1.2E+02 0.0041 30.3 14.0 29 158-189 532-560 (681)
135 2vsy_A XCC0866; transferase, g 62.0 87 0.003 30.0 12.5 39 139-187 111-152 (568)
136 1klx_A Cysteine rich protein B 62.0 53 0.0018 25.4 11.0 29 157-188 90-122 (138)
137 1na0_A Designed protein CTPR3; 61.6 39 0.0013 23.7 9.4 39 139-187 63-101 (125)
138 1elw_A TPR1-domain of HOP; HOP 60.3 40 0.0014 23.5 12.1 112 160-300 4-115 (118)
139 3ubc_A Hemoglobin-like flavopr 60.1 29 0.00099 27.1 7.3 86 210-308 3-90 (131)
140 1elw_A TPR1-domain of HOP; HOP 59.8 41 0.0014 23.4 9.4 27 158-187 70-96 (118)
141 2e2e_A Formate-dependent nitri 58.2 64 0.0022 25.1 13.2 79 139-241 30-110 (177)
142 3rjv_A Putative SEL1 repeat pr 58.0 78 0.0027 26.1 15.9 141 18-189 6-155 (212)
143 1a17_A Serine/threonine protei 57.6 58 0.002 24.5 14.6 81 139-243 67-148 (166)
144 2crb_A Nuclear receptor bindin 57.4 16 0.00054 28.2 4.8 35 32-67 14-48 (97)
145 1ouv_A Conserved hypothetical 56.9 87 0.003 26.3 16.5 17 225-241 235-251 (273)
146 4i17_A Hypothetical protein; T 56.9 78 0.0027 25.7 12.2 121 157-305 4-131 (228)
147 2if4_A ATFKBP42; FKBP-like, al 56.8 1.1E+02 0.0038 27.4 11.7 41 139-189 250-290 (338)
148 1hh8_A P67PHOX, NCF-2, neutrop 56.7 74 0.0025 25.3 10.5 60 160-240 6-65 (213)
149 1ouv_A Conserved hypothetical 56.4 88 0.003 26.2 17.8 15 47-61 55-69 (273)
150 2kck_A TPR repeat; tetratricop 55.3 45 0.0016 23.0 7.1 79 139-242 26-107 (112)
151 3mkq_A Coatomer beta'-subunit; 54.2 1.7E+02 0.0058 28.8 14.6 75 157-237 678-761 (814)
152 1na3_A Designed protein CTPR2; 54.0 12 0.00042 25.5 3.6 39 139-187 29-67 (91)
153 2dba_A Smooth muscle cell asso 54.0 63 0.0021 23.7 13.2 26 159-187 98-123 (148)
154 3fp2_A TPR repeat-containing p 53.8 1.4E+02 0.0046 27.5 19.2 38 139-186 79-116 (537)
155 3qou_A Protein YBBN; thioredox 52.8 1.1E+02 0.0039 26.4 14.4 27 158-187 217-243 (287)
156 1p5q_A FKBP52, FK506-binding p 52.4 70 0.0024 28.8 9.4 25 37-61 150-174 (336)
157 4g1t_A Interferon-induced prot 50.6 1.5E+02 0.005 27.0 14.3 131 159-302 50-183 (472)
158 2dba_A Smooth muscle cell asso 49.7 74 0.0025 23.3 13.0 115 157-300 25-142 (148)
159 2fo7_A Synthetic consensus TPR 49.0 67 0.0023 22.6 13.4 77 139-240 55-131 (136)
160 2h6f_A Protein farnesyltransfe 49.0 1.7E+02 0.0057 27.1 17.4 91 207-304 230-322 (382)
161 2ijq_A Hypothetical protein; s 48.1 68 0.0023 26.9 7.9 74 14-87 32-108 (161)
162 2lni_A Stress-induced-phosphop 46.4 77 0.0026 22.6 11.6 118 13-174 15-132 (133)
163 1hxi_A PEX5, peroxisome target 45.9 90 0.0031 23.2 7.8 39 139-187 71-109 (121)
164 1klx_A Cysteine rich protein B 45.9 54 0.0018 25.4 6.7 40 145-189 44-87 (138)
165 2vyi_A SGTA protein; chaperone 45.5 77 0.0026 22.3 10.1 39 139-187 66-104 (131)
166 2l6j_A TPR repeat-containing p 44.2 19 0.00066 25.4 3.4 39 139-187 24-62 (111)
167 2ooe_A Cleavage stimulation fa 42.1 2.2E+02 0.0077 26.7 12.6 83 158-243 319-422 (530)
168 2c2l_A CHIP, carboxy terminus 41.8 1.7E+02 0.0058 25.2 12.9 81 139-244 24-104 (281)
169 3qou_A Protein YBBN; thioredox 41.2 1.7E+02 0.006 25.2 13.6 28 158-188 149-176 (287)
170 2kc7_A BFR218_protein; tetratr 41.0 22 0.00074 25.0 3.3 39 139-187 20-59 (99)
171 2cwy_A Hypothetical protein TT 40.8 1.1E+02 0.0039 22.9 8.1 24 21-44 8-31 (94)
172 3ffl_A Anaphase-promoting comp 40.0 1.7E+02 0.0058 24.7 12.0 104 56-186 22-145 (167)
173 2wm9_A Dedicator of cytokinesi 39.9 1.4E+02 0.0047 28.6 9.7 71 17-87 13-121 (428)
174 1a17_A Serine/threonine protei 38.8 1.2E+02 0.0041 22.6 11.7 118 23-187 22-141 (166)
175 2ond_A Cleavage stimulation fa 38.1 2E+02 0.0067 24.9 17.2 17 223-239 214-230 (308)
176 3ma5_A Tetratricopeptide repea 37.7 96 0.0033 22.0 6.6 73 24-105 17-89 (100)
177 1hxi_A PEX5, peroxisome target 37.3 93 0.0032 23.1 6.6 78 139-241 37-114 (121)
178 1p5q_A FKBP52, FK506-binding p 36.2 2.3E+02 0.0079 25.2 10.8 129 159-305 146-278 (336)
179 3k9i_A BH0479 protein; putativ 36.0 29 0.00098 25.5 3.3 39 139-187 47-85 (117)
180 2xcb_A PCRH, regulatory protei 34.5 1.5E+02 0.005 22.3 14.3 65 159-241 17-81 (142)
181 3a1y_A 50S ribosomal protein P 33.9 82 0.0028 21.7 5.1 41 60-104 6-46 (58)
182 1wao_1 Serine/threonine protei 33.8 69 0.0023 30.6 6.5 116 25-187 17-134 (477)
183 1wao_1 Serine/threonine protei 33.5 1.2E+02 0.004 29.0 8.1 39 139-187 60-98 (477)
184 3lpz_A GET4 (YOR164C homolog); 32.2 3.2E+02 0.011 25.5 11.1 76 22-100 43-118 (336)
185 3rjv_A Putative SEL1 repeat pr 32.1 2.1E+02 0.0071 23.3 10.9 30 157-189 15-44 (212)
186 1kt0_A FKBP51, 51 kDa FK506-bi 31.5 2E+02 0.0067 27.0 9.3 114 160-301 268-395 (457)
187 2fvh_A Urease gamma subunit; p 31.1 79 0.0027 25.3 5.2 44 40-85 39-85 (120)
188 2if4_A ATFKBP42; FKBP-like, al 30.2 82 0.0028 28.3 6.1 62 161-240 231-292 (338)
189 2xm6_A Protein corresponding t 29.9 3.4E+02 0.011 25.1 21.4 28 158-188 181-212 (490)
190 1xnf_A Lipoprotein NLPI; TPR, 28.6 2.4E+02 0.0081 22.9 18.6 51 12-62 19-71 (275)
191 2kat_A Uncharacterized protein 28.6 45 0.0015 24.1 3.3 39 139-187 39-77 (115)
192 3t5x_A PCI domain-containing p 27.9 2.8E+02 0.0095 23.5 10.2 104 161-299 15-123 (203)
193 2v5f_A Prolyl 4-hydroxylase su 26.5 1.5E+02 0.0051 21.5 6.0 54 23-76 14-68 (104)
194 2ond_A Cleavage stimulation fa 26.1 3.1E+02 0.011 23.5 13.8 144 139-302 84-252 (308)
195 4fur_A Urease subunit gamma 2; 25.9 82 0.0028 24.6 4.3 46 40-87 23-71 (104)
196 4ep8_A Urease subunit gamma; a 25.8 1.2E+02 0.004 23.5 5.2 46 40-87 19-67 (100)
197 2x6h_A GH13170P, VPS34, phosph 24.8 64 0.0022 33.3 4.6 125 86-226 31-155 (696)
198 3spa_A Mtrpol, DNA-directed RN 24.6 1.8E+02 0.0061 31.8 8.1 69 31-103 123-210 (1134)
199 1b79_A DNAB helicase; hexamer, 23.7 2E+02 0.007 22.2 6.5 27 23-49 43-70 (119)
200 1mba_A Myoglobin; oxygen stora 21.8 2.5E+02 0.0087 21.9 6.9 89 209-303 4-98 (147)
201 4ac7_A Urease subunit gamma; h 21.7 1.5E+02 0.0052 22.9 5.1 45 41-87 20-67 (100)
202 2p9x_A Hypothetical protein PH 21.6 1E+02 0.0035 23.7 4.0 38 68-106 58-96 (99)
203 2lbf_A 60S acidic ribosomal pr 21.2 97 0.0033 22.2 3.7 40 61-104 13-52 (69)
204 1wfd_A Hypothetical protein 15 20.4 2.5E+02 0.0085 20.9 6.1 22 45-66 26-47 (93)
205 2vgx_A Chaperone SYCD; alterna 20.3 2.9E+02 0.0099 21.0 14.3 64 159-240 20-83 (148)
No 1
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=100.00 E-value=2e-89 Score=656.21 Aligned_cols=281 Identities=25% Similarity=0.416 Sum_probs=268.6
Q ss_pred CChhHHHHHHHHHHhccCCh---hHHHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhC
Q 020832 11 LPPAQENIDKLEKIVNEGNF---YGAQQMYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKG 87 (321)
Q Consensus 11 ~~~~~r~l~rl~~~i~~G~~---YEAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~ 87 (321)
+.+++||++||+++|++|+| |||||||||+++||++++||+||+||||+||+.|+++||++||+||+++|||||+++
T Consensus 9 ~~~~~~~i~rl~~~I~~G~y~~~YEAHQ~~RTi~~Ry~~~k~y~eAidLL~~GA~~ll~~~Q~~sg~DL~~llvevy~~~ 88 (336)
T 3lpz_A 9 SNKIERIIARLQRRIAEGQPEEQYEAAQETRLVAARYSKQGNWAAAVDILASVSQTLLRSGQGGSGGDLAVLLVDTFRQA 88 (336)
T ss_dssp -CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhCCCCccccHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHc
Confidence 46899999999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHhCCCCCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q 020832 88 KVAYDNENLDRVRKIYELFPQIPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVMLA 167 (321)
Q Consensus 88 ~~~~~~~~~~rl~~l~~~~p~~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~la 167 (321)
+++||+++++||++|++.||+++|+| ++||++||+||+++|++|+|||+||+++|
T Consensus 89 ~~~~~~~~~~rL~~L~~~~~~~~p~r-------------------------~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig 143 (336)
T 3lpz_A 89 GQRVDGASRGKLLGCLRLFQPGEPVR-------------------------KRFVKEMIDWSKKFGDYPAGDPELHHVVG 143 (336)
T ss_dssp TCCCCHHHHHHHHHHHTTSCTTCHHH-------------------------HHHHHHHHHHHHHHSSCTTCCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhCCCCCcHH-------------------------HHHHHHHHHHHhhcCCCCCCCHHHHHHHH
Confidence 99999999999999999999999877 99999999999999999999999999999
Q ss_pred HHHHhcCCCCChHHHhhHhhcCCCh--HHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHhhhh
Q 020832 168 EYLYSESPELDMARVSFHFVRGNNP--EKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYIMDEVKKQVENK 245 (321)
Q Consensus 168 ~~~~~e~~~~~~~~A~~Hfl~~~~~--~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f~~~~~~~ 245 (321)
++||+|+ +|++|++|||+|+|+ +.||+||++|+++++++|.|+|++||||+|||++|+++|+++++.|++++++.
T Consensus 144 ~~~~~e~---~~~~Ae~H~ilg~~~s~~~~a~mL~ew~~~~~~~e~dlfiaRaVL~yL~l~n~~~A~~~~~~f~~~l~~~ 220 (336)
T 3lpz_A 144 TLYVEEG---EFEAAEKHLVLGTKESPEVLARMEYEWYKQDESHTAPLYCARAVLPYLLVANVRAANTAYRIFTSALVED 220 (336)
T ss_dssp HHHHHTT---CHHHHHHHHTTSCTTHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHccC---CHHHHHHHHHhcCCchHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhc
Confidence 9999999 999999999999996 59999999999999999999999999999999999999999999999988543
Q ss_pred ccC---------------CCCChhhhHHHHHHHHhccCChhHHHHHHHHhHHhhhcch-hHHHHHHHHHHHhcCCCC---
Q 020832 246 QLQ---------------LQPSDLIQFVFYVLQTLERDALPLFNMLRANYKASIEREP-AFNEMLDDIAEKFFGVKR--- 306 (321)
Q Consensus 246 ~~~---------------~~~~PlLnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l~rd~-~~~~~L~~Ig~~yFgi~~--- 306 (321)
.++ +|++|||||+|||++|||+++.++|+.||++|+++|+||| +|.+|||+||++||||+|
T Consensus 221 ~p~L~~q~~~~~~~~~~~~p~~PLLNFl~lLllt~q~~~~~lF~~L~~~Y~~~l~rd~~~~~~~L~~IG~~YFgi~~prq 300 (336)
T 3lpz_A 221 NKGLTVQNIGSQSAELRIFPSLPLLNFISMLLLSVQKGSPDLFRQLKSKYEANLNELNGIWDTALELIAEMYFGIQRPRQ 300 (336)
T ss_dssp CTTSCCEESCC--CCCEECTTCHHHHHHHHHHHHHHSCCHHHHHHHHHHTHHHHHTTTTTTHHHHHHHHHHHHCCCCCCC
T ss_pred CCCccccccccCCcccccCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHcCCCCCCC
Confidence 322 5679999999999999999999999999999999999999 999999999999999986
Q ss_pred CCCchHhHHHhhh
Q 020832 307 RNPMQGIFGDIFK 319 (321)
Q Consensus 307 ~~~l~~m~~~lf~ 319 (321)
+|+|+||||+|||
T Consensus 301 ~n~L~~mmg~lFg 313 (336)
T 3lpz_A 301 SNPLLDMMGSLFG 313 (336)
T ss_dssp CCHHHHHHHHHHC
T ss_pred CCchHHHHHHhcC
Confidence 4679999999996
No 2
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=100.00 E-value=5.6e-87 Score=635.65 Aligned_cols=276 Identities=19% Similarity=0.319 Sum_probs=252.6
Q ss_pred hhHHHHHHHHHHhccCChhHHHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCCC
Q 020832 13 PAQENIDKLEKIVNEGNFYGAQQMYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAYD 92 (321)
Q Consensus 13 ~~~r~l~rl~~~i~~G~~YEAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~ 92 (321)
|++||++||+++|++|+||||||||||+++||++++||+||+|||++||+.|+++||++||+|||+++||||++++++++
T Consensus 12 ~~~r~l~rl~~~I~~G~yYEAhQ~~Rtl~~Ry~~~~~~~eAidlL~~ga~~ll~~~Q~~sa~DLa~llvev~~~~~~~~~ 91 (312)
T 2wpv_A 12 KLAKTLQRFENKIKAGDYYEAHQTLRTIANRYVRSKSYEHAIELISQGALSFLKAKQGGSGTDLIFYLLEVYDLAEVKVD 91 (312)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred HHHHHHHHHHHHhhccChHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhCCCCCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHh
Q 020832 93 NENLDRVRKIYELFPQIPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYS 172 (321)
Q Consensus 93 ~~~~~rl~~l~~~~p~~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~ 172 (321)
+++++||++|++.||+++|+| ++|+++||+||++.|++++|||+||+++|++||+
T Consensus 92 ~~~~~rl~~l~~~~p~~~~~r-------------------------~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~ 146 (312)
T 2wpv_A 92 DISVARLVRLIAELDPSEPNL-------------------------KDVITGMNNWSIKFSEYKFGDPYLHNTIGSKLLE 146 (312)
T ss_dssp HHHHHHHHHHHTTCCTTCTTH-------------------------HHHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCchH-------------------------HHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhh
Confidence 999999999999999999887 9999999999999998999999999999999999
Q ss_pred cCCCCChHHHhhHhhcCC--ChHHHHHHHHHHhhc---cCCChhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHhhh---
Q 020832 173 ESPELDMARVSFHFVRGN--NPEKFASTIVNFMGK---CYPGEDDLAVARAILMYLSLGNMKDANYIMDEVKKQVEN--- 244 (321)
Q Consensus 173 e~~~~~~~~A~~Hfl~~~--~~~~~a~~L~ew~~~---~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f~~~~~~--- 244 (321)
|+ ++.+|++|||+|+ |++.|++||++|+++ |+|+|.|+|++|+||+|||++|+++|+++++.|++++++
T Consensus 147 e~---~~~~A~~H~i~~~~~s~~~~a~~l~~w~~~~~~~~~~e~dlf~~RaVL~yL~l~n~~~A~~~~~~f~~~~~~~~~ 223 (312)
T 2wpv_A 147 GD---FVYEAERYFMLGTHDSMIKYVDLLWDWLCQVDDIEDSTVAEFFSRLVFNYLFISNISFAHESKDIFLERFIEKFH 223 (312)
T ss_dssp TT---CHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHHHHHHHC
T ss_pred cC---CHHHHHHHHHhCCCccHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhcc
Confidence 99 9999999999999 588999999999988 999999999999999999999999999999999999853
Q ss_pred ----------hccCC-CCChhhhHHHHHHHHhccCChhHHHHHHHHhHHhhhcchhHHHHHHHHHHHhcCCCCC---CCc
Q 020832 245 ----------KQLQL-QPSDLIQFVFYVLQTLERDALPLFNMLRANYKASIEREPAFNEMLDDIAEKFFGVKRR---NPM 310 (321)
Q Consensus 245 ----------~~~~~-~~~PlLnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l~rd~~~~~~L~~Ig~~yFgi~~~---~~l 310 (321)
...++ |++|+|||++||++|||+++.++|+.||++|+++|+ +|.+|||+||++||||+|+ |+|
T Consensus 224 ~~~~~~~~~~~~~~~~p~~pllnF~~lLl~t~e~~~~~lF~~L~~~Y~~~L~---~~~~~L~~Ig~~yFgi~~~~q~~~l 300 (312)
T 2wpv_A 224 PKYEKIDKNGYEIVFFEDYSDLNFLQLLLITCQTKDKSYFLNLKNHYLDFSQ---AYKSELEFLGQEYFNIVAPKQTNFL 300 (312)
T ss_dssp CCEEEEEETTEEEEEESSCHHHHHHHHHHHHHHHTCHHHHHHHHHHCHHHHH---HTHHHHHHHHHHHHCCC--------
T ss_pred cccccccccccCCCCCCCCccHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhcCCCCCCCCCcH
Confidence 12233 679999999999999999999999999999999998 8999999999999999874 468
Q ss_pred hHhHHHhhh
Q 020832 311 QGIFGDIFK 319 (321)
Q Consensus 311 ~~m~~~lf~ 319 (321)
+||||+|||
T Consensus 301 ~~mm~~lfg 309 (312)
T 2wpv_A 301 QDMMSGFLG 309 (312)
T ss_dssp ---------
T ss_pred HHHHHHHhC
Confidence 899999886
No 3
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.15 E-value=0.00025 Score=64.76 Aligned_cols=245 Identities=10% Similarity=0.018 Sum_probs=144.5
Q ss_pred cCChhHHHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCC-CChhHHHHHHHHHHh
Q 020832 27 EGNFYGAQQMYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVA-YDNENLDRVRKIYEL 105 (321)
Q Consensus 27 ~G~~YEAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~-~~~~~~~rl~~l~~~ 105 (321)
.|+|=+|...|.-..+-|..+++|++|++.+...+...-+.+.....+..-..+-.+|...+-. --.+.+.+.+++...
T Consensus 29 ~~~~~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~ 108 (307)
T 2ifu_A 29 KPDYDSAASEYAKAAVAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVE 108 (307)
T ss_dssp SCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 5788899999999999899999999999988888777766665544444444444455443311 111223333333321
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhH
Q 020832 106 FPQIPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFH 185 (321)
Q Consensus 106 ~p~~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~H 185 (321)
..... . ...-...+-+.... ...+.-..+.++|+.+....+. +.+....+..+|.+|.+.+ +|.+|..+
T Consensus 109 ~g~~~--~---~a~~~~~lg~~~~~--g~~~~A~~~~~~Al~~~~~~~~-~~~~~~~~~~lg~~~~~~g---~~~~A~~~ 177 (307)
T 2ifu_A 109 NGTPD--T---AAMALDRAGKLMEP--LDLSKAVHLYQQAAAVFENEER-LRQAAELIGKASRLLVRQQ---KFDEAAAS 177 (307)
T ss_dssp TTCHH--H---HHHHHHHHHHHHTT--TCHHHHHHHHHHHHHHHHHTTC-HHHHHHHHHHHHHHHHHTT---CHHHHHHH
T ss_pred cCCHH--H---HHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHhCCC-hhHHHHHHHHHHHHHHHcC---CHHHHHHH
Confidence 10000 0 00000000000000 0111126778888888875442 1233577889999999999 99999987
Q ss_pred hhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHhhhhccCCCCChhhhHHHHHHHHh
Q 020832 186 FVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYIMDEVKKQVENKQLQLQPSDLIQFVFYVLQTL 265 (321)
Q Consensus 186 fl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f~~~~~~~~~~~~~~PlLnF~~lLl~t~ 265 (321)
|-.+-. -.-..+............++.+++.++...|...++... ..| .+.......++.-|+.++
T Consensus 178 ~~~al~---------~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p----~~~~~~e~~~l~~l~~~~ 243 (307)
T 2ifu_A 178 LQKEKS---------MYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIP----GFSGSEDCAALEDLLQAY 243 (307)
T ss_dssp HHHHHH---------HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TST----TSTTSHHHHHHHHHHHHH
T ss_pred HHHHHH---------HHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCC----CCCCCHHHHHHHHHHHHH
Confidence 753211 111111111112234455667888999999999887766 322 333455566777788888
Q ss_pred ccCChhHHHHHHHHhHHhhhcchhHHHHHHHH
Q 020832 266 ERDALPLFNMLRANYKASIEREPAFNEMLDDI 297 (321)
Q Consensus 266 e~~~~~~F~~L~~~Y~~~l~rd~~~~~~L~~I 297 (321)
+.++...|..+ .+|.....-||.....+.++
T Consensus 244 ~~~d~~~~~~~-~~~~~~~~ld~~~~~~~~~l 274 (307)
T 2ifu_A 244 DEQDEEQLLRV-CRSPLVTYMDNDYAKLAISL 274 (307)
T ss_dssp HTTCHHHHHHH-TTSHHHHTSCHHHHHHHHTC
T ss_pred HhcCHHHHHHH-HhCchhhhhhHHHHHHHHhC
Confidence 88899999984 55887776776655554443
No 4
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.10 E-value=0.0011 Score=62.05 Aligned_cols=252 Identities=13% Similarity=0.064 Sum_probs=146.7
Q ss_pred HHHHHHHHhccCChhHHHHHHHHHHHHHhhhhC-----------HHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHh
Q 020832 17 NIDKLEKIVNEGNFYGAQQMYKSISARYVAAQR-----------YSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALV 85 (321)
Q Consensus 17 ~l~rl~~~i~~G~~YEAhQ~~RTl~~Ry~~~~k-----------~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~ 85 (321)
.++.-+..+++|+|-||.+.|+.+......... ..+--+.|..=+..+.+.|++..+.++....++...
T Consensus 7 ~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~ 86 (434)
T 4b4t_Q 7 KLEEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMM 86 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 455667789999999999999999876543221 112222345556777888999988888777777665
Q ss_pred hCCCCCChhHHHHHHHHHHhCCCCCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 020832 86 KGKVAYDNENLDRVRKIYELFPQIPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVM 165 (321)
Q Consensus 86 ~~~~~~~~~~~~rl~~l~~~~p~~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~ 165 (321)
+.+-.. ....+..++..+..... + ..+ ...+...++.|..+.+. .++-..++..
T Consensus 87 ~~~~~~---~~~~~~~~l~~~~~~~~------~-----~~~-----------a~~~~~~~~~~~~~~~~-~~~~~~~~~~ 140 (434)
T 4b4t_Q 87 QFAKSK---TVKVLKTLIEKFEQVPD------S-----LDD-----------QIFVCEKSIEFAKREKR-VFLKHSLSIK 140 (434)
T ss_dssp TSCHHH---HHHHHHHHHHHHCSCCS------C-----HHH-----------HHHHHHHHHHHHHHSSC-CSSHHHHHHH
T ss_pred HccchH---HHHHHHHHHHHHHhCCC------C-----HHH-----------HHHHHHHHHHHHHHhCc-cHHHHHHHHH
Confidence 542211 12223333333332211 0 111 17888999999987763 4677899999
Q ss_pred HHHHHHhcCCCCChHHHhhHhh-------cCCChHHHHHHHHH---H-hhcc------------------CCChh---HH
Q 020832 166 LAEYLYSESPELDMARVSFHFV-------RGNNPEKFASTIVN---F-MGKC------------------YPGED---DL 213 (321)
Q Consensus 166 la~~~~~e~~~~~~~~A~~Hfl-------~~~~~~~~a~~L~e---w-~~~~------------------~~~e~---dl 213 (321)
+|.+|...| +|.+|..++- ..+|....++.+.. . ...+ .+... ..
T Consensus 141 la~~~~~~g---~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~ 217 (434)
T 4b4t_Q 141 LATLHYQKK---QYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQTVAE 217 (434)
T ss_dssp HHHHHHHHT---CHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHH
T ss_pred HHHHHHHcc---ChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCchHHHHH
Confidence 999999999 9998877653 12222222222221 1 1111 11111 11
Q ss_pred HHHHHHHHHHhcCChhHHHHHHHHHHHHhhhhcc-------------------------------------CCCCChhhh
Q 020832 214 AVARAILMYLSLGNMKDANYIMDEVKKQVENKQL-------------------------------------QLQPSDLIQ 256 (321)
Q Consensus 214 fi~RaVL~~L~l~n~~~A~~~~~~f~~~~~~~~~-------------------------------------~~~~~PlLn 256 (321)
+.......+...++...|...|....+....... .....|.+.
T Consensus 218 ~~~~~g~~~~~~~~y~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (434)
T 4b4t_Q 218 LDLMSGILHCEDKDYKTAFSYFFESFESYHNLTTHNSYEKACQVLKYMLLSKIMLNLIDDVKNILNAKYTKETYQSRGID 297 (434)
T ss_dssp HHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCSSSSTTCCCHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHhccchhHHHhHHHHHHHHHHhcchhhh
Confidence 2222222334456777666554443332211100 012345555
Q ss_pred HHHHHHHHhccCChhHHHHHHHHhHHhhhcchhHHHHHHHH
Q 020832 257 FVFYVLQTLERDALPLFNMLRANYKASIEREPAFNEMLDDI 297 (321)
Q Consensus 257 F~~lLl~t~e~~~~~~F~~L~~~Y~~~l~rd~~~~~~L~~I 297 (321)
....|+.+........|......|...+..|+.....++.+
T Consensus 298 ~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 338 (434)
T 4b4t_Q 298 AMKAVAEAYNNRSLLDFNTALKQYEKELMGDELTRSHFNAL 338 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTHHHHTCSHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 66667777777788888888999999988887665544433
No 5
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.90 E-value=0.00066 Score=61.46 Aligned_cols=249 Identities=13% Similarity=0.061 Sum_probs=140.8
Q ss_pred ChhHHHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCCC-hhHHHHHHHHHHhCC
Q 020832 29 NFYGAQQMYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAYD-NENLDRVRKIYELFP 107 (321)
Q Consensus 29 ~~YEAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~-~~~~~rl~~l~~~~p 107 (321)
+|=||...|.-..+-|..+++|++|++...+.....-+.|.....+..-..+-.+|.+.+-.-. .+...+.+++.....
T Consensus 32 ~~~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g 111 (292)
T 1qqe_A 32 KFEEAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRG 111 (292)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcC
Confidence 3777888888888888888888888887777766655555443333333333334433321100 012223333322110
Q ss_pred CCCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhh
Q 020832 108 QIPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFV 187 (321)
Q Consensus 108 ~~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl 187 (321)
... . .......+-+.....-...+.-..+.++|+.+....+. +.+....+..+|.+|.+.+ +|.+|..+|-
T Consensus 112 ~~~--~---~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~-~~~~~~~~~~lg~~~~~~g---~~~~A~~~~~ 182 (292)
T 1qqe_A 112 QFR--R---GANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQS-VALSNKCFIKCADLKALDG---QYIEASDIYS 182 (292)
T ss_dssp CHH--H---HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTC-HHHHHHHHHHHHHHHHHTT---CHHHHHHHHH
T ss_pred CHH--H---HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCC-hHHHHHHHHHHHHHHHHhC---CHHHHHHHHH
Confidence 000 0 00000000000000000112226788899988875432 1223567889999999999 9999987664
Q ss_pred cCCChHHHHHHHHHHhhccCC---ChhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHhhhhccCCCCChhhhHHHHHHHH
Q 020832 188 RGNNPEKFASTIVNFMGKCYP---GEDDLAVARAILMYLSLGNMKDANYIMDEVKKQVENKQLQLQPSDLIQFVFYVLQT 264 (321)
Q Consensus 188 ~~~~~~~~a~~L~ew~~~~~~---~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f~~~~~~~~~~~~~~PlLnF~~lLl~t 264 (321)
.. .+....... +..+ +..+..+.++.+|+...|...++.+.+..| .++...-..++.-|..+
T Consensus 183 ~a----------l~~~~~~~~~~~~~~~-~~~~lg~~~~~~g~~~~A~~~~~~al~l~p----~~~~~~~~~~l~~l~~~ 247 (292)
T 1qqe_A 183 KL----------IKSSMGNRLSQWSLKD-YFLKKGLCQLAATDAVAAARTLQEGQSEDP----NFADSRESNFLKSLIDA 247 (292)
T ss_dssp HH----------HHTTSSCTTTGGGHHH-HHHHHHHHHHHTTCHHHHHHHHHGGGCC-------------HHHHHHHHHH
T ss_pred HH----------HHHHhcCCcccHHHHH-HHHHHHHHHHHcCCHHHHHHHHHHHHhhCC----CCCCcHHHHHHHHHHHH
Confidence 21 111001000 1122 345556678899999999998877665333 22222334566667788
Q ss_pred hccCChhHHHHHHHHhHHhhhcchhHHHHHHHHHHHh
Q 020832 265 LERDALPLFNMLRANYKASIEREPAFNEMLDDIAEKF 301 (321)
Q Consensus 265 ~e~~~~~~F~~L~~~Y~~~l~rd~~~~~~L~~Ig~~y 301 (321)
++.++...|..-...|...+.-||.....+-+|....
T Consensus 248 ~~~~~~~~~~~A~~~~~~~~~l~~~~~~~~~~~k~~~ 284 (292)
T 1qqe_A 248 VNEGDSEQLSEHCKEFDNFMRLDKWKITILNKIKESI 284 (292)
T ss_dssp HHTTCTTTHHHHHHHHTTSSCCCHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHhccCCccHHHHHHHHHHHHHHh
Confidence 8888888999999999999999999999999988765
No 6
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=96.93 E-value=0.15 Score=43.29 Aligned_cols=246 Identities=14% Similarity=0.089 Sum_probs=136.4
Q ss_pred HhccCChhHHHHHHHHHHHHHhhhh--CHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCC---CCChhHHHH
Q 020832 24 IVNEGNFYGAQQMYKSISARYVAAQ--RYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKV---AYDNENLDR 98 (321)
Q Consensus 24 ~i~~G~~YEAhQ~~RTl~~Ry~~~~--k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~---~~~~~~~~r 98 (321)
....|++-+|.+.|+.....+.+.. ....-.+.++.-+..+...|++..|.+.....++...+..- +........
T Consensus 11 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~ 90 (283)
T 3edt_B 11 SSGLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNN 90 (283)
T ss_dssp --CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHH
Confidence 4567788888888887777665443 33556677777777888888888888887777776655411 112233455
Q ss_pred HHHHHHhCCCCCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCC-CCCCHHHHHHHHHHHHhcCCCC
Q 020832 99 VRKIYELFPQIPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAP-KTGSPELHVMLAEYLYSESPEL 177 (321)
Q Consensus 99 l~~l~~~~p~~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~-~~Gdp~LH~~la~~~~~e~~~~ 177 (321)
+..++.... + .+++ ..+..+|+....+.++. ....+..+..+|.+|+..+
T Consensus 91 l~~~~~~~g-----~----------~~~A-----------~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g--- 141 (283)
T 3edt_B 91 LAVLYGKRG-----K----------YKEA-----------EPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQG--- 141 (283)
T ss_dssp HHHHHHTTT-----C----------HHHH-----------HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTT---
T ss_pred HHHHHHHhc-----c----------HHHH-----------HHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcC---
Confidence 555554221 0 1222 66777777776554321 1234578889999999999
Q ss_pred ChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHhhhhccCCCCChhhhH
Q 020832 178 DMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYIMDEVKKQVENKQLQLQPSDLIQF 257 (321)
Q Consensus 178 ~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f~~~~~~~~~~~~~~PlLnF 257 (321)
++.+|..+|-.+-+ ..........|.....+.. ....|...|+...|...+....+..+...... ..|....
T Consensus 142 ~~~~A~~~~~~al~------~~~~~~~~~~~~~~~~~~~-la~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~-~~~~~~~ 213 (283)
T 3edt_B 142 KAEEVEYYYRRALE------IYATRLGPDDPNVAKTKNN-LASCYLKQGKYQDAETLYKEILTRAHEKEFGS-VNGDNKP 213 (283)
T ss_dssp CHHHHHHHHHHHHH------HHHHHSCTTCHHHHHHHHH-HHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSS-CCSSCCC
T ss_pred CHHHHHHHHHHHHH------HHHHhcCCCCHHHHHHHHH-HHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCC-cchhHHH
Confidence 99999977642211 1111101111222222333 33445678999999999998887655432211 1122222
Q ss_pred HHHHHHHhcc-----CChhHHHHHHHHhHHhhhcchhHHHHHHHHHHHhcCCCC
Q 020832 258 VFYVLQTLER-----DALPLFNMLRANYKASIEREPAFNEMLDDIAEKFFGVKR 306 (321)
Q Consensus 258 ~~lLl~t~e~-----~~~~~F~~L~~~Y~~~l~rd~~~~~~L~~Ig~~yFgi~~ 306 (321)
+++.+..+.. .....+......++.....+|.....+..+|..|+....
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~ 267 (283)
T 3edt_B 214 IWMHAEEREESKDKRRDSAPYGEYGSWYKACKVDSPTVNTTLRSLGALYRRQGK 267 (283)
T ss_dssp HHHHHHHHHHTTCCCCC------------CCCCCCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCCchhHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCC
Confidence 2222222221 223456666666666666678888889999999876543
No 7
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=96.86 E-value=0.061 Score=48.65 Aligned_cols=177 Identities=10% Similarity=0.118 Sum_probs=113.8
Q ss_pred ccCChhHHHHHHHHHHHHHh----h-hhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCCCh-hHHHHH
Q 020832 26 NEGNFYGAQQMYKSISARYV----A-AQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAYDN-ENLDRV 99 (321)
Q Consensus 26 ~~G~~YEAhQ~~RTl~~Ry~----~-~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~~-~~~~rl 99 (321)
..|+|=||.++++-.-.+.. + .++|++|+++..+.+..+...|++..+.+.....++++.+.+.+... .....+
T Consensus 3 ~~~~~~eA~~~~~~a~k~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~l 82 (307)
T 2ifu_A 3 AAQKISEAHEHIAKAEKYLKTSFMKWKPDYDSAASEYAKAAVAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQA 82 (307)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCCSSSCSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHccccccCCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 34555566666664443322 2 57999999999999999999999999999999999998877643321 244566
Q ss_pred HHHHHhCCCCCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCCh
Q 020832 100 RKIYELFPQIPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDM 179 (321)
Q Consensus 100 ~~l~~~~p~~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~ 179 (321)
..++.....- +| -....++|+.-....|.+ .+....+..+|.+|.. + ++
T Consensus 83 g~~~~~~g~~---------------~~-----------A~~~~~~Al~l~~~~g~~-~~~a~~~~~lg~~~~~-g---~~ 131 (307)
T 2ifu_A 83 GMMLKDLQRM---------------PE-----------AVQYIEKASVMYVENGTP-DTAAMALDRAGKLMEP-L---DL 131 (307)
T ss_dssp HHHHHHTTCG---------------GG-----------GHHHHHHHHHHHHTTTCH-HHHHHHHHHHHHHHTT-T---CH
T ss_pred HHHHHhCCCH---------------HH-----------HHHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHc-C---CH
Confidence 6666543211 11 166777777765543321 2223577889999988 9 99
Q ss_pred HHHhhHhhcCCChHHHHHHHHHHhh-ccCCC-hhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHhhh
Q 020832 180 ARVSFHFVRGNNPEKFASTIVNFMG-KCYPG-EDDLAVARAILMYLSLGNMKDANYIMDEVKKQVEN 244 (321)
Q Consensus 180 ~~A~~Hfl~~~~~~~~a~~L~ew~~-~~~~~-e~dlfi~RaVL~~L~l~n~~~A~~~~~~f~~~~~~ 244 (321)
.+|..||-.+- ++.. .+.+. ....+. ..-..|..+|+...|...+..-.+..+.
T Consensus 132 ~~A~~~~~~Al----------~~~~~~~~~~~~~~~~~-~lg~~~~~~g~~~~A~~~~~~al~~~~~ 187 (307)
T 2ifu_A 132 SKAVHLYQQAA----------AVFENEERLRQAAELIG-KASRLLVRQQKFDEAAASLQKEKSMYKE 187 (307)
T ss_dssp HHHHHHHHHHH----------HHHHHTTCHHHHHHHHH-HHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH----------HHHHhCCChhHHHHHHH-HHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 99998875321 1111 11111 122222 2233467789999999998887766553
No 8
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=96.78 E-value=0.23 Score=43.01 Aligned_cols=256 Identities=14% Similarity=0.142 Sum_probs=144.6
Q ss_pred CCChhHHHHHHH-HHHhccCChhHHHHHHHHHHHHHhhhh--CHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhh
Q 020832 10 ALPPAQENIDKL-EKIVNEGNFYGAQQMYKSISARYVAAQ--RYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVK 86 (321)
Q Consensus 10 ~~~~~~r~l~rl-~~~i~~G~~YEAhQ~~RTl~~Ry~~~~--k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~ 86 (321)
+.|...+++..+ ......|+|=+|.+.++.........+ ........+..-+..+...|++..|.+.....++.+++
T Consensus 22 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 101 (311)
T 3nf1_A 22 EIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREK 101 (311)
T ss_dssp TSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 444444444443 566788999999999998888776665 55666777888888899999999999888888777665
Q ss_pred C--CC-CCChhHHHHHHHHHHhCCCCCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhc-CCCCCCCHHH
Q 020832 87 G--KV-AYDNENLDRVRKIYELFPQIPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEF-GAPKTGSPEL 162 (321)
Q Consensus 87 ~--~~-~~~~~~~~rl~~l~~~~p~~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~-g~~~~Gdp~L 162 (321)
. +. +........+..++.... . ..++ ..++.++++...+. +......+..
T Consensus 102 ~~~~~~~~~~~~~~~l~~~~~~~g--~-------------~~~A-----------~~~~~~a~~~~~~~~~~~~~~~~~~ 155 (311)
T 3nf1_A 102 TLGKDHPAVAATLNNLAVLYGKRG--K-------------YKEA-----------EPLCKRALEIREKVLGKDHPDVAKQ 155 (311)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHTTT--C-------------HHHH-----------HHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HhCCCChHHHHHHHHHHHHHHHcC--c-------------HHHH-----------HHHHHHHHHHHHHhcCCCChHHHHH
Confidence 4 11 112233345555554221 0 1222 66777777766543 2222335577
Q ss_pred HHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhcc----CCChhHHHHHHHHHHHHhcCChhHHHHHHHHH
Q 020832 163 HVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKC----YPGEDDLAVARAILMYLSLGNMKDANYIMDEV 238 (321)
Q Consensus 163 H~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~----~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f 238 (321)
+..+|.+++..+ ++.+|..+|-.+ .+...+. .+.....+. .....|+..|+.+.|...+...
T Consensus 156 ~~~la~~~~~~~---~~~~A~~~~~~a----------~~~~~~~~~~~~~~~~~~~~-~la~~~~~~g~~~~A~~~~~~a 221 (311)
T 3nf1_A 156 LNNLALLCQNQG---KYEEVEYYYQRA----------LEIYQTKLGPDDPNVAKTKN-NLASCYLKQGKFKQAETLYKEI 221 (311)
T ss_dssp HHHHHHHHHTTT---CHHHHHHHHHHH----------HHHHHHTSCTTCHHHHHHHH-HHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC---CHHHHHHHHHHH----------HHHHHHHhCCCCHHHHHHHH-HHHHHHHHcCCHHHHHHHHHHH
Confidence 889999999999 999999776422 1111111 122222222 3334456789999999999888
Q ss_pred HHHhhhhccC---CCCChhhhHHHHHHHHhcc-CChhHHHHHHHHhHHhhhcchhHHHHHHHHHHHhcCCC
Q 020832 239 KKQVENKQLQ---LQPSDLIQFVFYVLQTLER-DALPLFNMLRANYKASIEREPAFNEMLDDIAEKFFGVK 305 (321)
Q Consensus 239 ~~~~~~~~~~---~~~~PlLnF~~lLl~t~e~-~~~~~F~~L~~~Y~~~l~rd~~~~~~L~~Ig~~yFgi~ 305 (321)
.+..+..... +...+.......+...... .....+......|+..+..+|.....+..+|..|+...
T Consensus 222 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g 292 (311)
T 3nf1_A 222 LTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQG 292 (311)
T ss_dssp HHHHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCC
Confidence 8765543211 1111222222211111111 11222222334455555566777788888888887654
No 9
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=96.35 E-value=0.55 Score=43.37 Aligned_cols=134 Identities=15% Similarity=0.048 Sum_probs=70.2
Q ss_pred CCHHHHHHHHHHHHhcCCCCChHHHhhHhhcC-----CChHHHHHHHHHHhh---------------ccCCChhHHHHHH
Q 020832 158 GSPELHVMLAEYLYSESPELDMARVSFHFVRG-----NNPEKFASTIVNFMG---------------KCYPGEDDLAVAR 217 (321)
Q Consensus 158 Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~-----~~~~~~a~~L~ew~~---------------~~~~~e~dlfi~R 217 (321)
.++..+..+|.+|.+.| ++.+|..+|-.. +++..+..+-.-... +-.|.....+...
T Consensus 175 ~~~~~~~~l~~~~~~~g---~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~~ 251 (450)
T 2y4t_A 175 WDAELRELRAECFIKEG---EPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHY 251 (450)
T ss_dssp TCHHHHHHHHHHHHHTT---CGGGGHHHHHHHHHHHCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CChHHHHHHHHHHHHCC---CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHHHH
Confidence 47899999999999999 998888887632 233322221111111 1123222222111
Q ss_pred -----------HHHHHHhcCChhHHHHHHHHHHHHhhhhccCCCCChhhhH-HHHHH--HHhccCChhHHHHHHHHhHHh
Q 020832 218 -----------AILMYLSLGNMKDANYIMDEVKKQVENKQLQLQPSDLIQF-VFYVL--QTLERDALPLFNMLRANYKAS 283 (321)
Q Consensus 218 -----------aVL~~L~l~n~~~A~~~~~~f~~~~~~~~~~~~~~PlLnF-~~lLl--~t~e~~~~~~F~~L~~~Y~~~ 283 (321)
..-.+...++...|...|....+..+ ..|.... ++..+ .-...+ -+..-.+.|+..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p-------~~~~~~~~~~~~l~~~~~~~g---~~~~A~~~~~~a 321 (450)
T 2y4t_A 252 KQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEP-------SIAEYTVRSKERICHCFSKDE---KPVEAIRVCSEV 321 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCC-------SSHHHHHHHHHHHHHHHHTTT---CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC-------cchHHHHHHHHHHHHHHHHCC---CHHHHHHHHHHH
Confidence 13345557888888888777665322 2232211 11111 111222 233445556666
Q ss_pred hhcchhHHHHHHHHHHHhcCC
Q 020832 284 IEREPAFNEMLDDIAEKFFGV 304 (321)
Q Consensus 284 l~rd~~~~~~L~~Ig~~yFgi 304 (321)
++.+|.....+..+|..|+..
T Consensus 322 ~~~~p~~~~~~~~l~~~~~~~ 342 (450)
T 2y4t_A 322 LQMEPDNVNALKDRAEAYLIE 342 (450)
T ss_dssp HHHCTTCHHHHHHHHHHHHHT
T ss_pred HHhCcccHHHHHHHHHHHHHh
Confidence 666666666666777776644
No 10
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=96.20 E-value=0.089 Score=51.06 Aligned_cols=208 Identities=11% Similarity=0.065 Sum_probs=113.4
Q ss_pred HHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHhCCCCCCCCCCCCCchhHHHHHHHhhhhhhhh
Q 020832 57 LHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAYDNENLDRVRKIYELFPQIPVPHNLEDDDDLHELTEALGAAKLRVE 136 (321)
Q Consensus 57 L~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~~~~~~rl~~l~~~~p~~~~~r~l~~~~~~~~~~e~~~~~~~~~~ 136 (321)
+++-+..+.+.|+...-.+|...+...+..-...-+++.+..|++.+...|.+ .+.
T Consensus 22 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~kak~~k~v~~l~~~~~~~~~~---------~~~--------------- 77 (394)
T 3txn_A 22 ILQQGELYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAG---------TGI--------------- 77 (394)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTTTGGGGSCHHHHHHHHHHHHHHHTTSCCC---------HHH---------------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCc---------HHH---------------
Confidence 44444555555665555555444444443332222344555555555544421 111
Q ss_pred hhhHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhh-------cCCChHHHHHHHH---HHhh-c
Q 020832 137 GCSSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFV-------RGNNPEKFASTIV---NFMG-K 205 (321)
Q Consensus 137 ~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl-------~~~~~~~~a~~L~---ew~~-~ 205 (321)
...+...+|+|++..-- .+=.-.|...+|..|+..| +|.+|...+- ..+|+.-+.++.. +++. .
T Consensus 78 -~~~~~~~~~~~a~~~~r-~flr~~l~~kL~~l~~~~~---~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~ 152 (394)
T 3txn_A 78 -EVQLCKDCIEWAKQEKR-TFLRQSLEARLIALYFDTA---LYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHAL 152 (394)
T ss_dssp -HHHHHHHHHHHHHHTTC-HHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHh
Confidence 17788899999985421 0111124557899999999 9988744332 2344443222221 2211 0
Q ss_pred ---------------------cCCChhH-HHHHHHHHHHH-hcCChhHHHHHH-HHHHHHhhhhc---------------
Q 020832 206 ---------------------CYPGEDD-LAVARAILMYL-SLGNMKDANYIM-DEVKKQVENKQ--------------- 246 (321)
Q Consensus 206 ---------------------~~~~e~d-lfi~RaVL~~L-~l~n~~~A~~~~-~~f~~~~~~~~--------------- 246 (321)
++|.-.+ +-..-+ +.++ +.++.+.|...| +.|. ......
T Consensus 153 ~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~~~~G-i~~l~~~rdyk~A~~~F~eaf~-~f~~~~~~~~~~~lkYlvL~a 230 (394)
T 3txn_A 153 SNLPKARAALTSARTTANAIYCPPKVQGALDLQSG-ILHAADERDFKTAFSYFYEAFE-GFDSVDSVKALTSLKYMLLCK 230 (394)
T ss_dssp TCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHH-HHHHHTTSCHHHHHHHHHHHHH-HHTTTCHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhhhccCCCCHHHHHHHHHHhh-HHHHHhccCHHHHHHHHHHHHh-cccccccHHHHHHHHHHHHHH
Confidence 1121122 223333 3445 788887665544 3332 221110
Q ss_pred ----c-------------CCCCChhhhHHHHHHHHhccCChhHHHHHHHHhHHhhhcchhHHHHHH
Q 020832 247 ----L-------------QLQPSDLIQFVFYVLQTLERDALPLFNMLRANYKASIEREPAFNEMLD 295 (321)
Q Consensus 247 ----~-------------~~~~~PlLnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l~rd~~~~~~L~ 295 (321)
. ....-|-+....-|+.+...++...|..+.+.|++.+..||-+...++
T Consensus 231 Ll~~~r~el~~~l~~~~~~~~~~pei~~l~~L~~a~~~~dl~~f~~iL~~~~~~l~~D~~l~~h~~ 296 (394)
T 3txn_A 231 IMLGQSDDVNQLVSGKLAITYSGRDIDAMKSVAEASHKRSLADFQAALKEYKKELAEDVIVQAHLG 296 (394)
T ss_dssp HHTTCGGGHHHHHHSHHHHTTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHSTTTTTTSHHHHHHHH
T ss_pred HHcCCHHHHHHHhccccccccCCccHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcChHHHHHHH
Confidence 0 011346677777788899999999999999999999999987655443
No 11
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=96.04 E-value=0.61 Score=41.98 Aligned_cols=186 Identities=9% Similarity=0.029 Sum_probs=117.2
Q ss_pred HHHHHHHHhccCChhHHHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCCCh-hH
Q 020832 17 NIDKLEKIVNEGNFYGAQQMYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAYDN-EN 95 (321)
Q Consensus 17 ~l~rl~~~i~~G~~YEAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~~-~~ 95 (321)
...+=......|+|=+|.+.++..... ..+.......+++.-+..+...|++..+.+.....++.....+.+... ..
T Consensus 12 l~~~g~~~~~~g~~~~A~~~~~~al~~--~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 89 (406)
T 3sf4_A 12 LALEGERLCKSGDCRAGVSFFEAAVQV--GTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKA 89 (406)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH--CCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhc--CcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHHH
Confidence 344456678899999999999888776 334555556778888888889999999999888888877766533222 23
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCC
Q 020832 96 LDRVRKIYELFPQIPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESP 175 (321)
Q Consensus 96 ~~rl~~l~~~~p~~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~ 175 (321)
...+..++.... . ..++ ..+..+|+....+.++ +.+.+..+..+|.+|+..+
T Consensus 90 ~~~la~~~~~~g--~-------------~~~A-----------~~~~~~al~~~~~~~~-~~~~~~~~~~l~~~~~~~g- 141 (406)
T 3sf4_A 90 SGNLGNTLKVLG--N-------------FDEA-----------IVCCQRHLDISRELND-KVGEARALYNLGNVYHAKG- 141 (406)
T ss_dssp HHHHHHHHHHTT--C-------------HHHH-----------HHHHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHcC--C-------------HHHH-----------HHHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHcC-
Confidence 344445544321 0 1222 6677777777765542 2334678899999999998
Q ss_pred CCC--------------------hHHHhhHhhcCCChHHHHHHHHHHhhc-cCCChhHHHHHHHHHHHHhcCChhHHHHH
Q 020832 176 ELD--------------------MARVSFHFVRGNNPEKFASTIVNFMGK-CYPGEDDLAVARAILMYLSLGNMKDANYI 234 (321)
Q Consensus 176 ~~~--------------------~~~A~~Hfl~~~~~~~~a~~L~ew~~~-~~~~e~dlfi~RaVL~~L~l~n~~~A~~~ 234 (321)
+ +.+|..++-.+ .+...+ +.+.............|...|+...|...
T Consensus 142 --~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a----------l~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 209 (406)
T 3sf4_A 142 --KSFGCPGPQDVGEFPEEVRDALQAAVDFYEEN----------LSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIA 209 (406)
T ss_dssp --HTCC-------CCCCHHHHHHHHHHHHHHHHH----------HHHHHHTTCHHHHHHHHHHHHHHHHHHTBHHHHHHH
T ss_pred --CcccccccchhhhhhhhHHHHHHHHHHHHHHH----------HHHHHhccCcHHHHHHHHHHHHHHHHccCHHHHHHH
Confidence 8 77777666321 111111 11111111222333445668999999998
Q ss_pred HHHHHHHhhh
Q 020832 235 MDEVKKQVEN 244 (321)
Q Consensus 235 ~~~f~~~~~~ 244 (321)
+....+..+.
T Consensus 210 ~~~al~~~~~ 219 (406)
T 3sf4_A 210 HEQRLLIAKE 219 (406)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 8887776554
No 12
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.00 E-value=0.79 Score=40.82 Aligned_cols=152 Identities=14% Similarity=0.106 Sum_probs=102.0
Q ss_pred CHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCCC-hhHHHHHHHHHHhCCCCCCCCCCCCCchhHHHHHH
Q 020832 49 RYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAYD-NENLDRVRKIYELFPQIPVPHNLEDDDDLHELTEA 127 (321)
Q Consensus 49 k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~-~~~~~rl~~l~~~~p~~~~~r~l~~~~~~~~~~e~ 127 (321)
+|++|++...+.+..+...|++..|.+.....++++.+.+.+.+ ......+..++.... + .+|+
T Consensus 32 ~~~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g-----~----------~~~A 96 (292)
T 1qqe_A 32 KFEEAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGG-----N----------SVNA 96 (292)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-----C----------HHHH
T ss_pred cHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCC-----C----------HHHH
Confidence 69999999999999999999999999999988998887764433 234466666665432 0 2233
Q ss_pred HhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhc-CCCCChHHHhhHhhcCCChHHHHHHHHHHhh-c
Q 020832 128 LGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSE-SPELDMARVSFHFVRGNNPEKFASTIVNFMG-K 205 (321)
Q Consensus 128 ~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e-~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~-~ 205 (321)
....++|+.-....|. +.+....+..+|.+|... + ++.+|..||-.+- ++.. .
T Consensus 97 -----------~~~~~~Al~l~~~~g~-~~~~a~~~~~lg~~~~~~lg---~~~~A~~~~~~Al----------~~~~~~ 151 (292)
T 1qqe_A 97 -----------VDSLENAIQIFTHRGQ-FRRGANFKFELGEILENDLH---DYAKAIDCYELAG----------EWYAQD 151 (292)
T ss_dssp -----------HHHHHHHHHHHHHTTC-HHHHHHHHHHHHHHHHHTTC---CHHHHHHHHHHHH----------HHHHHT
T ss_pred -----------HHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHhhc---CHHHHHHHHHHHH----------HHHHhC
Confidence 5677788876654432 122346788999999997 9 9999998875321 1111 1
Q ss_pred cCCC-hhHHHHHHHHHHHHhcCChhHHHHHHHHHHHH
Q 020832 206 CYPG-EDDLAVARAILMYLSLGNMKDANYIMDEVKKQ 241 (321)
Q Consensus 206 ~~~~-e~dlfi~RaVL~~L~l~n~~~A~~~~~~f~~~ 241 (321)
+.+. ..+.+ ......|+.+|+...|...++.-.+.
T Consensus 152 ~~~~~~~~~~-~~lg~~~~~~g~~~~A~~~~~~al~~ 187 (292)
T 1qqe_A 152 QSVALSNKCF-IKCADLKALDGQYIEASDIYSKLIKS 187 (292)
T ss_dssp TCHHHHHHHH-HHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred CChHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 1111 11222 23334467789999999887776653
No 13
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=95.96 E-value=0.071 Score=41.08 Aligned_cols=136 Identities=9% Similarity=-0.057 Sum_probs=96.3
Q ss_pred HHHhccCChhHHHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCCCh-hHHHHHH
Q 020832 22 EKIVNEGNFYGAQQMYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAYDN-ENLDRVR 100 (321)
Q Consensus 22 ~~~i~~G~~YEAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~~-~~~~rl~ 100 (321)
......|+|=+|.+.++.........+........+..-+..+...|++..+.+.....++...+.+.+... .....+.
T Consensus 17 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~ 96 (164)
T 3ro3_A 17 NTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLG 96 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHH
Confidence 344677889999999988888887777777777788888888899999999998888888877766433221 1223444
Q ss_pred HHHHhCCCCCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChH
Q 020832 101 KIYELFPQIPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMA 180 (321)
Q Consensus 101 ~l~~~~p~~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~ 180 (321)
.++..... ..++ ...+++|+......+. +...+..+..+|.+++..+ ++.
T Consensus 97 ~~~~~~~~---------------~~~A-----------~~~~~~a~~~~~~~~~-~~~~~~~~~~la~~~~~~g---~~~ 146 (164)
T 3ro3_A 97 NTYTLLQD---------------YEKA-----------IDYHLKHLAIAQELKD-RIGEGRACWSLGNAYTALG---NHD 146 (164)
T ss_dssp HHHHHTTC---------------HHHH-----------HHHHHHHHHHHHHTTC-HHHHHHHHHHHHHHHHHHT---CHH
T ss_pred HHHHHHhh---------------HHHH-----------HHHHHHHHHHHHHccc-hHhHHHHHHHHHHHHHHcc---CHH
Confidence 44432210 1222 6777888887765542 2344678899999999999 999
Q ss_pred HHhhHhh
Q 020832 181 RVSFHFV 187 (321)
Q Consensus 181 ~A~~Hfl 187 (321)
+|..++-
T Consensus 147 ~A~~~~~ 153 (164)
T 3ro3_A 147 QAMHFAE 153 (164)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9988774
No 14
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=95.88 E-value=0.19 Score=40.97 Aligned_cols=176 Identities=7% Similarity=-0.067 Sum_probs=98.2
Q ss_pred HhccCChhHHHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCCCh-hHHHHHHHH
Q 020832 24 IVNEGNFYGAQQMYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAYDN-ENLDRVRKI 102 (321)
Q Consensus 24 ~i~~G~~YEAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~~-~~~~rl~~l 102 (321)
.+.+|+|=+|.+.++.+ .+........+..-+..+...|++..+.+.....++.+.+.+.+... .....+..+
T Consensus 2 ~~~~g~~~~A~~~~~~~------~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~ 75 (203)
T 3gw4_A 2 AFEAHDYALAERQAQAL------LAHPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMV 75 (203)
T ss_dssp -----CHHHHHHHHHHH------HTSTTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHh------cCChHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHH
Confidence 35677777777744333 11222334555666667777777777777777777777666543322 222344444
Q ss_pred HHhCCCCCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHH
Q 020832 103 YELFPQIPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARV 182 (321)
Q Consensus 103 ~~~~p~~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A 182 (321)
+.... . ..++ ..++.+|+......++.+.+....+..+|.+++..| ++.+|
T Consensus 76 ~~~~g--~-------------~~~A-----------~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g---~~~~A 126 (203)
T 3gw4_A 76 ERMAG--N-------------WDAA-----------RRCFLEERELLASLPEDPLAASANAYEVATVALHFG---DLAGA 126 (203)
T ss_dssp HHHTT--C-------------HHHH-----------HHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHT---CHHHH
T ss_pred HHHcC--C-------------HHHH-----------HHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhC---CHHHH
Confidence 44321 0 1222 677888888877655332344567889999999999 99999
Q ss_pred hhHhhcCCChHHHHHHHHHHhh-ccCCChhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHhhh
Q 020832 183 SFHFVRGNNPEKFASTIVNFMG-KCYPGEDDLAVARAILMYLSLGNMKDANYIMDEVKKQVEN 244 (321)
Q Consensus 183 ~~Hfl~~~~~~~~a~~L~ew~~-~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f~~~~~~ 244 (321)
..+|-.+- +... .+.+.............++..|+...|...+..-.+....
T Consensus 127 ~~~~~~al----------~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 179 (203)
T 3gw4_A 127 RQEYEKSL----------VYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAE 179 (203)
T ss_dssp HHHHHHHH----------HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH----------HHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHH
Confidence 98775331 1111 1111111111222333456678999998888776665543
No 15
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=95.74 E-value=0.34 Score=40.63 Aligned_cols=152 Identities=14% Similarity=0.091 Sum_probs=83.5
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCC----hHHHHH------HHHHH--hhcc
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFVRGNN----PEKFAS------TIVNF--MGKC 206 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~----~~~~a~------~L~ew--~~~~ 206 (321)
...+.+++.-..+.+......+..+..+|.+|.+.+ ++.+|..+|-.+-. +..+.. .+..+ ..+.
T Consensus 58 ~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 134 (258)
T 3uq3_A 58 ISTLNDAVEQGREMRADYKVISKSFARIGNAYHKLG---DLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYV 134 (258)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHcc---cHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHc
Confidence 455566666554332111122688999999999999 99999988864322 221111 11111 1123
Q ss_pred CCChhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHhhhhccCCCCChhhhHHHHHHHHhccCChhHHHHHHHHhHHhhhc
Q 020832 207 YPGEDDLAVARAILMYLSLGNMKDANYIMDEVKKQVENKQLQLQPSDLIQFVFYVLQTLERDALPLFNMLRANYKASIER 286 (321)
Q Consensus 207 ~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f~~~~~~~~~~~~~~PlLnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l~r 286 (321)
.|.....+...+.+ +...++...|...+....+..+ ..|.+ +..+-..-+..+. |..-...|...++.
T Consensus 135 ~~~~~~~~~~~~~~-~~~~~~~~~A~~~~~~a~~~~~-------~~~~~-~~~l~~~~~~~~~---~~~A~~~~~~al~~ 202 (258)
T 3uq3_A 135 NPEKAEEARLEGKE-YFTKSDWPNAVKAYTEMIKRAP-------EDARG-YSNRAAALAKLMS---FPEAIADCNKAIEK 202 (258)
T ss_dssp CHHHHHHHHHHHHH-HHHTTCHHHHHHHHHHHHHHCT-------TCHHH-HHHHHHHHHHTTC---HHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHH-HHHhcCHHHHHHHHHHHHhcCc-------ccHHH-HHHHHHHHHHhCC---HHHHHHHHHHHHHh
Confidence 34455555555544 5677889988888877665432 12211 1111111122233 33445566666766
Q ss_pred chhHHHHHHHHHHHhcCCC
Q 020832 287 EPAFNEMLDDIAEKFFGVK 305 (321)
Q Consensus 287 d~~~~~~L~~Ig~~yFgi~ 305 (321)
+|........+|..|+...
T Consensus 203 ~~~~~~~~~~l~~~~~~~g 221 (258)
T 3uq3_A 203 DPNFVRAYIRKATAQIAVK 221 (258)
T ss_dssp CTTCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHh
Confidence 7777777777888777654
No 16
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=95.66 E-value=1.3 Score=40.58 Aligned_cols=93 Identities=14% Similarity=0.051 Sum_probs=56.7
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhc-cCCChhHHHHHH
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGK-CYPGEDDLAVAR 217 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~-~~~~e~dlfi~R 217 (321)
..+..+|++-..+.++...+....+..+|.+|...| ++.+|..||-.+-+ ...+ +.+.........
T Consensus 163 ~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g---~~~~A~~~~~~al~----------~~~~~~~~~~~~~~~~~ 229 (383)
T 3ulq_A 163 MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLK---QYEDAISHFQKAYS----------MAEAEKQPQLMGRTLYN 229 (383)
T ss_dssp HHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHH----------HHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHH----------HHHHcCChHHHHHHHHH
Confidence 567777777766554333445578899999999999 99999988753221 1111 111111111222
Q ss_pred HHHHHHhcCChhHHHHHHHHHHHHhhh
Q 020832 218 AILMYLSLGNMKDANYIMDEVKKQVEN 244 (321)
Q Consensus 218 aVL~~L~l~n~~~A~~~~~~f~~~~~~ 244 (321)
.-..|...|+...|...+....+....
T Consensus 230 lg~~y~~~g~~~~A~~~~~~al~~~~~ 256 (383)
T 3ulq_A 230 IGLCKNSQSQYEDAIPYFKRAIAVFEE 256 (383)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHh
Confidence 233456678888888888777765443
No 17
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=95.65 E-value=1.3 Score=40.60 Aligned_cols=149 Identities=10% Similarity=0.026 Sum_probs=84.6
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHH
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARA 218 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~Ra 218 (321)
.....+|+.-..+.+. +.+....+..+|.+|...+ ++.+|..||--+-. + .-..+.|.... .....
T Consensus 202 ~~~~~~al~~~~~~~~-~~~~~~~~~~lg~~y~~~~---~~~~A~~~~~~al~------~---~~~~~~~~~~~-~~~~l 267 (378)
T 3q15_A 202 LPHLEAALELAMDIQN-DRFIAISLLNIANSYDRSG---DDQMAVEHFQKAAK------V---SREKVPDLLPK-VLFGL 267 (378)
T ss_dssp HHHHHHHHHHHHHTTC-HHHHHHHHHHHHHHHHHHT---CHHHHHHHHHHHHH------H---HHHHCGGGHHH-HHHHH
T ss_pred HHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHH------H---HHhhCChhHHH-HHHHH
Confidence 6677888887765542 1234467788999999999 99999988854321 0 00112222222 22233
Q ss_pred HHHHHhcCChhHHHHHHHHHHHHhhhhccCCCCChhhhHHHHHHHH-hccCChhHHHHHHHHhHHhhhcchhHHHHHHHH
Q 020832 219 ILMYLSLGNMKDANYIMDEVKKQVENKQLQLQPSDLIQFVFYVLQT-LERDALPLFNMLRANYKASIEREPAFNEMLDDI 297 (321)
Q Consensus 219 VL~~L~l~n~~~A~~~~~~f~~~~~~~~~~~~~~PlLnF~~lLl~t-~e~~~~~~F~~L~~~Y~~~l~rd~~~~~~L~~I 297 (321)
...|...|+...|...++.-.+..+....+ ....-+..|-.. .+.+....+......++. ....|....+...+
T Consensus 268 a~~~~~~g~~~~A~~~~~~al~~~~~~~~~----~~~~~~~~l~~ly~~~~~~~~~~~al~~~~~-~~~~~~~~~~~~~l 342 (378)
T 3q15_A 268 SWTLCKAGQTQKAFQFIEEGLDHITARSHK----FYKELFLFLQAVYKETVDERKIHDLLSYFEK-KNLHAYIEACARSA 342 (378)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCCTTCCS----CHHHHHHHHHHHHSSSCCHHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHcCCH----HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHh-CCChhHHHHHHHHH
Confidence 334567899999999888777654432211 111112222222 223333334443333333 33456777788899
Q ss_pred HHHhcCCCC
Q 020832 298 AEKFFGVKR 306 (321)
Q Consensus 298 g~~yFgi~~ 306 (321)
|..|+....
T Consensus 343 a~~y~~~g~ 351 (378)
T 3q15_A 343 AAVFESSCH 351 (378)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHCCC
Confidence 999987653
No 18
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=95.56 E-value=1.2 Score=40.80 Aligned_cols=148 Identities=8% Similarity=-0.023 Sum_probs=81.3
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhc-cCCChhHHHHHH
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGK-CYPGEDDLAVAR 217 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~-~~~~e~dlfi~R 217 (321)
..+..+|+.-..+.++.+.+....+..+|.+|...+ ++.+|..||-.+-+ ...+ +.+.........
T Consensus 161 ~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~---~~~~A~~~~~~al~----------~~~~~~~~~~~~~~~~~ 227 (378)
T 3q15_A 161 MYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFK---HYDKALPHLEAALE----------LAMDIQNDRFIAISLLN 227 (378)
T ss_dssp HHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHH----------HHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHH----------HHHHcCCHHHHHHHHHH
Confidence 566777777666544333345677889999999999 99999988753211 1111 111111112222
Q ss_pred HHHHHHhcCChhHHHHHHHHHHHHhhhhccCCCCChhhhHHHHHHHHhccCChhHHHHHHHHhHHhhh-----cchhHHH
Q 020832 218 AILMYLSLGNMKDANYIMDEVKKQVENKQLQLQPSDLIQFVFYVLQTLERDALPLFNMLRANYKASIE-----REPAFNE 292 (321)
Q Consensus 218 aVL~~L~l~n~~~A~~~~~~f~~~~~~~~~~~~~~PlLnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l~-----rd~~~~~ 292 (321)
.-..|...|+...|...+..-.+.......+.....+.|... .-...++.+. -.+.|+..++ .+|.+..
T Consensus 228 lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~---~~~~~g~~~~---A~~~~~~al~~~~~~~~~~~~~ 301 (378)
T 3q15_A 228 IANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSW---TLCKAGQTQK---AFQFIEEGLDHITARSHKFYKE 301 (378)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHH---HHHHTTCHHH---HHHHHHHHHHHCCTTCCSCHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHH---HHHHCCCHHH---HHHHHHHHHHHHHHcCCHHHHH
Confidence 334456689999999988887765443322111111111111 1222343332 2233333332 2567777
Q ss_pred HHHHHHHHhcCCC
Q 020832 293 MLDDIAEKFFGVK 305 (321)
Q Consensus 293 ~L~~Ig~~yFgi~ 305 (321)
.+..++.+|....
T Consensus 302 ~~~~l~~ly~~~~ 314 (378)
T 3q15_A 302 LFLFLQAVYKETV 314 (378)
T ss_dssp HHHHHHHHHSSSC
T ss_pred HHHHHHHHHhCCC
Confidence 7888888887654
No 19
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=95.46 E-value=1.1 Score=38.56 Aligned_cols=184 Identities=9% Similarity=0.023 Sum_probs=110.2
Q ss_pred HHHHHHhccCChhHHHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCCC-hhHHH
Q 020832 19 DKLEKIVNEGNFYGAQQMYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAYD-NENLD 97 (321)
Q Consensus 19 ~rl~~~i~~G~~YEAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~-~~~~~ 97 (321)
.+=......|+|=+|...++...... .+.......++..-+..+...|++..+.+.....++.....+.+.. .....
T Consensus 10 ~~g~~~~~~g~~~~A~~~~~~al~~~--~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 87 (338)
T 3ro2_A 10 LEGERLCKSGDCRAGVSFFEAAVQVG--TEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASG 87 (338)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHC--CSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHhhC--cccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHHHH
Confidence 33456678888888888888877752 3344445667777788888888888888887777777665543222 12223
Q ss_pred HHHHHHHhCCCCCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCC
Q 020832 98 RVRKIYELFPQIPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPEL 177 (321)
Q Consensus 98 rl~~l~~~~p~~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~ 177 (321)
.+..++.... . .+++ ..++.+|+....+.+. +.+....+..+|.+|...+
T Consensus 88 ~l~~~~~~~g--~-------------~~~A-----------~~~~~~al~~~~~~~~-~~~~~~~~~~l~~~~~~~~--- 137 (338)
T 3ro2_A 88 NLGNTLKVLG--N-------------FDEA-----------IVCCQRHLDISRELND-KVGEARALYNLGNVYHAKG--- 137 (338)
T ss_dssp HHHHHHHHTT--C-------------HHHH-----------HHHHHHHHHHHHHTTC-HHHHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHcc--C-------------HHHH-----------HHHHHHHHHHHHHhcC-chHHHHHHHHHHHHHHHcC---
Confidence 4444443221 0 1222 6677778877765432 1223458888999999888
Q ss_pred C--------------------hHHHhhHhhcCCChHHHHHHHHHHhhc-cCCChhHHHHHHHHHHHHhcCChhHHHHHHH
Q 020832 178 D--------------------MARVSFHFVRGNNPEKFASTIVNFMGK-CYPGEDDLAVARAILMYLSLGNMKDANYIMD 236 (321)
Q Consensus 178 ~--------------------~~~A~~Hfl~~~~~~~~a~~L~ew~~~-~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~ 236 (321)
+ +.+|..++-.+ .+.... +.+.............|+..++...|...+.
T Consensus 138 ~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a----------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 207 (338)
T 3ro2_A 138 KSFGCPGPQDTGEFPEDVRNALQAAVDLYEEN----------LSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHE 207 (338)
T ss_dssp HTSSSSSCC----CCHHHHHHHHHHHHHHHHH----------HHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred cccccchhhhhhhhhhhHHHHHHHHHHHHHHH----------HHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 7 77777666321 111111 1111111122223344566899999999888
Q ss_pred HHHHHhhh
Q 020832 237 EVKKQVEN 244 (321)
Q Consensus 237 ~f~~~~~~ 244 (321)
...+..+.
T Consensus 208 ~a~~~~~~ 215 (338)
T 3ro2_A 208 QRLLIAKE 215 (338)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 87766554
No 20
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=95.38 E-value=1.6 Score=39.91 Aligned_cols=149 Identities=11% Similarity=-0.026 Sum_probs=86.1
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhc-cC-CChhHHHHH
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGK-CY-PGEDDLAVA 216 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~-~~-~~e~dlfi~ 216 (321)
....++|+.-..+.++ +.+....+..+|.+|...| ++.+|..||-.+- +...+ +. |.....+..
T Consensus 204 ~~~~~~al~~~~~~~~-~~~~~~~~~~lg~~y~~~g---~~~~A~~~~~~al----------~~~~~~~~~~~~~~~~~~ 269 (383)
T 3ulq_A 204 ISHFQKAYSMAEAEKQ-PQLMGRTLYNIGLCKNSQS---QYEDAIPYFKRAI----------AVFEESNILPSLPQAYFL 269 (383)
T ss_dssp HHHHHHHHHHHHHTTC-HHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHH----------HHHHHTTCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHcCC-hHHHHHHHHHHHHHHHHCC---CHHHHHHHHHHHH----------HHHHhhccchhHHHHHHH
Confidence 6777888887765432 2233457888999999999 9999998875321 11121 22 333333333
Q ss_pred HHHHHHHhcCChhHHHHHHHHHHHHhhhhccCCCCChhhhHHHHHHHHhccCChhHHHHHHHHhHHhhhcchhHHHHHHH
Q 020832 217 RAILMYLSLGNMKDANYIMDEVKKQVENKQLQLQPSDLIQFVFYVLQTLERDALPLFNMLRANYKASIEREPAFNEMLDD 296 (321)
Q Consensus 217 RaVL~~L~l~n~~~A~~~~~~f~~~~~~~~~~~~~~PlLnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l~rd~~~~~~L~~ 296 (321)
.+ ..|...|+...|...+..-.+..+....+ ... ..+..+-..-...++...+......++.. ...|........
T Consensus 270 l~-~~~~~~g~~~~A~~~~~~al~~~~~~~~~--~~~-~~~~~l~~~~~~~~~~~~~~~al~~~~~~-~~~~~~~~~~~~ 344 (383)
T 3ulq_A 270 IT-QIHYKLGKIDKAHEYHSKGMAYSQKAGDV--IYL-SEFEFLKSLYLSGPDEEAIQGFFDFLESK-MLYADLEDFAID 344 (383)
T ss_dssp HH-HHHHHTTCHHHHHHHHHHHHHHHHHHTCH--HHH-HHHHHHHHHHTSSCCHHHHHHHHHHHHHT-TCHHHHHHHHHH
T ss_pred HH-HHHHHCCCHHHHHHHHHHHHHHHHHcCCH--HHH-HHHHHHHHHHhCCCcHHHHHHHHHHHHHC-cCHHHHHHHHHH
Confidence 33 34567899999999988877655433211 111 11222222233334434444444444443 445667778888
Q ss_pred HHHHhcCCCC
Q 020832 297 IAEKFFGVKR 306 (321)
Q Consensus 297 Ig~~yFgi~~ 306 (321)
+|..|+....
T Consensus 345 la~~y~~~g~ 354 (383)
T 3ulq_A 345 VAKYYHERKN 354 (383)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHCCC
Confidence 9999887653
No 21
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=95.35 E-value=1.2 Score=38.32 Aligned_cols=200 Identities=6% Similarity=-0.080 Sum_probs=104.7
Q ss_pred hccCChhHHHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCCCh-hHHHHHHHHH
Q 020832 25 VNEGNFYGAQQMYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAYDN-ENLDRVRKIY 103 (321)
Q Consensus 25 i~~G~~YEAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~~-~~~~rl~~l~ 103 (321)
...|+|=+|.+.++.........+........+..-+..+...|++..|.+.....++...+.+.+... .....+..++
T Consensus 54 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~ 133 (338)
T 3ro2_A 54 FYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVY 133 (338)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Confidence 445556666666655555544444444555555556666777778877777777777766665432221 1223333333
Q ss_pred HhCCCCCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHh
Q 020832 104 ELFPQIPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVS 183 (321)
Q Consensus 104 ~~~p~~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~ 183 (321)
......... .+..+.+....++. ...+....+..+++......+. +...+..+..+|.+++..+ ++.+|.
T Consensus 134 ~~~~~~~~~--~~~~~~~~~~~~a~----~~~~~A~~~~~~a~~~~~~~~~-~~~~~~~~~~l~~~~~~~~---~~~~A~ 203 (338)
T 3ro2_A 134 HAKGKSFGC--PGPQDTGEFPEDVR----NALQAAVDLYEENLSLVTALGD-RAAQGRAFGNLGNTHYLLG---NFRDAV 203 (338)
T ss_dssp HHHHHTSSS--SSCC----CCHHHH----HHHHHHHHHHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHHT---CHHHHH
T ss_pred HHcCccccc--chhhhhhhhhhhHH----HHHHHHHHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHhC---CHHHHH
Confidence 321110000 00000000011111 1112226667777777665442 2334568889999999999 999998
Q ss_pred hHhhcCCChHHHHHHHHHHhh-ccCCChhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHhhh
Q 020832 184 FHFVRGNNPEKFASTIVNFMG-KCYPGEDDLAVARAILMYLSLGNMKDANYIMDEVKKQVEN 244 (321)
Q Consensus 184 ~Hfl~~~~~~~~a~~L~ew~~-~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f~~~~~~ 244 (321)
.++-.+- +... .+.+.............|...|+...|...+....+..+.
T Consensus 204 ~~~~~a~----------~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 255 (338)
T 3ro2_A 204 IAHEQRL----------LIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQ 255 (338)
T ss_dssp HHHHHHH----------HHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH----------HHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh
Confidence 8764221 1111 1111111122333344467789999999998887766554
No 22
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=95.30 E-value=0.89 Score=38.34 Aligned_cols=47 Identities=6% Similarity=0.031 Sum_probs=34.4
Q ss_pred hHHHHHHHHHhhhcCC-CCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhc
Q 020832 139 SSFLKAAIKWSIEFGA-PKTGSPELHVMLAEYLYSESPELDMARVSFHFVR 188 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~-~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~ 188 (321)
...+.++++...+... .....+..+..+|.+|...+ ++.+|..+|-.
T Consensus 147 ~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g---~~~~A~~~~~~ 194 (283)
T 3edt_B 147 EYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQG---KYQDAETLYKE 194 (283)
T ss_dssp HHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHT---CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcC---CHHHHHHHHHH
Confidence 6777888887555421 11234577889999999999 99999988853
No 23
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=95.25 E-value=2.2 Score=40.88 Aligned_cols=22 Identities=14% Similarity=0.083 Sum_probs=12.7
Q ss_pred HHhcCChhHHHHHHHHHHHHhh
Q 020832 222 YLSLGNMKDANYIMDEVKKQVE 243 (321)
Q Consensus 222 ~L~l~n~~~A~~~~~~f~~~~~ 243 (321)
|...|+.+.|..+|+...+..+
T Consensus 485 ~~~~g~~~~A~~~~~~~~~~~~ 506 (597)
T 2xpi_A 485 AFNKSDMQTAINHFQNALLLVK 506 (597)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHhhh
Confidence 3455666666666666555443
No 24
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=95.18 E-value=1.8 Score=39.35 Aligned_cols=92 Identities=13% Similarity=0.029 Sum_probs=51.0
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHH
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARA 218 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~Ra 218 (321)
..+..+|+.-....+. +.+.+..+..+|.+|...+ ++.+|..+|-.+-. + .-..+.+..........
T Consensus 203 ~~~~~~al~~~~~~~~-~~~~~~~~~~la~~~~~~g---~~~~A~~~~~~al~------~---~~~~~~~~~~~~~~~~l 269 (411)
T 4a1s_A 203 VEFYQENLKLMRDLGD-RGAQGRACGNLGNTYYLLG---DFQAAIEHHQERLR------I---AREFGDRAAERRANSNL 269 (411)
T ss_dssp HHHHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHH------H---HHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHcC---ChHHHHHHHHHHHH------H---HHhcCCcHHHHHHHHHH
Confidence 5556666665554432 2344568889999999999 99999988753211 0 00011111111112222
Q ss_pred HHHHHhcCChhHHHHHHHHHHHHhh
Q 020832 219 ILMYLSLGNMKDANYIMDEVKKQVE 243 (321)
Q Consensus 219 VL~~L~l~n~~~A~~~~~~f~~~~~ 243 (321)
...|+..++...|...++......+
T Consensus 270 a~~~~~~g~~~~A~~~~~~al~~~~ 294 (411)
T 4a1s_A 270 GNSHIFLGQFEDAAEHYKRTLALAV 294 (411)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 2335556777777777666665444
No 25
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=94.76 E-value=1.5 Score=36.46 Aligned_cols=66 Identities=12% Similarity=0.038 Sum_probs=46.7
Q ss_pred CCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHHHHH
Q 020832 158 GSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYIMDE 237 (321)
Q Consensus 158 Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~ 237 (321)
.++..+..+|.+++..+ ++.+|..+|-.+- . ..|.....+...+. .|...++...|...++.
T Consensus 137 ~~~~~~~~~~~~~~~~~---~~~~A~~~~~~a~-------------~-~~~~~~~~~~~l~~-~~~~~~~~~~A~~~~~~ 198 (258)
T 3uq3_A 137 EKAEEARLEGKEYFTKS---DWPNAVKAYTEMI-------------K-RAPEDARGYSNRAA-ALAKLMSFPEAIADCNK 198 (258)
T ss_dssp HHHHHHHHHHHHHHHTT---CHHHHHHHHHHHH-------------H-HCTTCHHHHHHHHH-HHHHTTCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhc---CHHHHHHHHHHHH-------------h-cCcccHHHHHHHHH-HHHHhCCHHHHHHHHHH
Confidence 36788999999999999 9999987664321 1 12344455555554 45778999999998887
Q ss_pred HHHH
Q 020832 238 VKKQ 241 (321)
Q Consensus 238 f~~~ 241 (321)
..+.
T Consensus 199 al~~ 202 (258)
T 3uq3_A 199 AIEK 202 (258)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7664
No 26
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=94.64 E-value=2.5 Score=38.31 Aligned_cols=27 Identities=15% Similarity=0.075 Sum_probs=20.4
Q ss_pred CCHHHHHHHHHHHHhcCCCCChHHHhhHhh
Q 020832 158 GSPELHVMLAEYLYSESPELDMARVSFHFV 187 (321)
Q Consensus 158 Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl 187 (321)
.++..|..+|.+|.+.+ ++.+|..+|-
T Consensus 235 ~~~~~~~~l~~~~~~~g---~~~~A~~~~~ 261 (388)
T 1w3b_A 235 NHAVVHGNLACVYYEQG---LIDLAIDTYR 261 (388)
T ss_dssp TCHHHHHHHHHHHHHTT---CHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcC---CHHHHHHHHH
Confidence 36777888888888888 8877777664
No 27
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=94.61 E-value=2 Score=40.38 Aligned_cols=97 Identities=14% Similarity=0.039 Sum_probs=56.4
Q ss_pred CChhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHhhhhccCCCCC-hhhhHHHHHHHHhc----cCChhHHHHHHHHhHH
Q 020832 208 PGEDDLAVARAILMYLSLGNMKDANYIMDEVKKQVENKQLQLQPS-DLIQFVFYVLQTLE----RDALPLFNMLRANYKA 282 (321)
Q Consensus 208 ~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f~~~~~~~~~~~~~~-PlLnF~~lLl~t~e----~~~~~~F~~L~~~Y~~ 282 (321)
|...+.+...+ ..+...|+...|...+....+..+......... .+++-...+...-. .-...-+..-...|+.
T Consensus 375 ~~~~~~~~~l~-~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 453 (537)
T 3fp2_A 375 PTLPEVPTFFA-EILTDRGDFDTAIKQYDIAKRLEEVQEKIHVGIGPLIGKATILARQSSQDPTQLDEEKFNAAIKLLTK 453 (537)
T ss_dssp TTCTHHHHHHH-HHHHHTTCHHHHHHHHHHHHHHHHHCSSCSSTTHHHHHHHHHHHHHHTC----CCHHHHHHHHHHHHH
T ss_pred CCChHHHHHHH-HHHHHhCCHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHhhccchhhhHhHHHHHHHHHHH
Confidence 44444444443 345678999999999988877665432211111 11121222211100 0011556667778888
Q ss_pred hhhcchhHHHHHHHHHHHhcCCC
Q 020832 283 SIEREPAFNEMLDDIAEKFFGVK 305 (321)
Q Consensus 283 ~l~rd~~~~~~L~~Ig~~yFgi~ 305 (321)
.++.+|........+|..|+...
T Consensus 454 a~~~~p~~~~~~~~l~~~~~~~g 476 (537)
T 3fp2_A 454 ACELDPRSEQAKIGLAQLKLQME 476 (537)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHhCCCCHHHHHHHHHHHHHhc
Confidence 88888888888899999988664
No 28
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=94.50 E-value=2.7 Score=38.14 Aligned_cols=182 Identities=8% Similarity=0.053 Sum_probs=107.3
Q ss_pred HHHhccCChhHHHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCCC-hhHHHHHH
Q 020832 22 EKIVNEGNFYGAQQMYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAYD-NENLDRVR 100 (321)
Q Consensus 22 ~~~i~~G~~YEAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~-~~~~~rl~ 100 (321)
......|+|=+|.+.|+...... .+.......+++.-+..+...|++..+.+.....++.....+.... ......+.
T Consensus 56 ~~~~~~g~~~~A~~~~~~al~~~--~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~ 133 (411)
T 4a1s_A 56 ERLCNAGDCRAGVAFFQAAIQAG--TEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLG 133 (411)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHC--CSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHhCcHHHHHHHHHHHHHhc--ccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHH
Confidence 45577788888888777776652 3344444456666677777888888888887777777666543222 12234444
Q ss_pred HHHHhCCCCCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCC--
Q 020832 101 KIYELFPQIPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELD-- 178 (321)
Q Consensus 101 ~l~~~~p~~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~-- 178 (321)
.++..... ..++ .....+|+.-....++ +......+..+|.+|...+ +
T Consensus 134 ~~~~~~g~---------------~~~A-----------~~~~~~al~~~~~~~~-~~~~~~~~~~l~~~~~~~g---~~~ 183 (411)
T 4a1s_A 134 NTLKVMGR---------------FDEA-----------AICCERHLTLARQLGD-RLSEGRALYNLGNVYHAKG---KHL 183 (411)
T ss_dssp HHHHHTTC---------------HHHH-----------HHHHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHHH---HHH
T ss_pred HHHHHCCC---------------HHHH-----------HHHHHHHHHHHHHhhc-hHHHHHHHHHHHHHHHHcC---ccc
Confidence 44443210 1222 5667777777665442 2344578889999999999 8
Q ss_pred ---------------hHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHhh
Q 020832 179 ---------------MARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYIMDEVKKQVE 243 (321)
Q Consensus 179 ---------------~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f~~~~~ 243 (321)
+.+|..++-.+- ++.- ..+.+.............|+..++...|...+....+..+
T Consensus 184 ~~~~~~~~~~~a~~~~~~A~~~~~~al------~~~~---~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 254 (411)
T 4a1s_A 184 GQRNPGKFGDDVKEALTRAVEFYQENL------KLMR---DLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAR 254 (411)
T ss_dssp HHHSTTCCCHHHHHHHHHHHHHHHHHH------HHHH---HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred ccccchhhhhhhhHHHHHHHHHHHHHH------HHHH---HcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Confidence 777776653211 1101 1111111111223333446778999999999888777665
Q ss_pred h
Q 020832 244 N 244 (321)
Q Consensus 244 ~ 244 (321)
.
T Consensus 255 ~ 255 (411)
T 4a1s_A 255 E 255 (411)
T ss_dssp H
T ss_pred h
Confidence 4
No 29
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=94.49 E-value=1.2 Score=33.90 Aligned_cols=156 Identities=9% Similarity=0.035 Sum_probs=85.7
Q ss_pred CChhHHHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHhCC
Q 020832 28 GNFYGAQQMYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAYDNENLDRVRKIYELFP 107 (321)
Q Consensus 28 G~~YEAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~~~~~~rl~~l~~~~p 107 (321)
|+...--..+..+..=|...+++++|++.+.++....-+.+....-+. ....+..++....
T Consensus 3 ~d~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~-------------------~~~~l~~~~~~~g 63 (164)
T 3ro3_A 3 GSRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERI-------------------AYSNLGNAYIFLG 63 (164)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHH-------------------HHHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHH-------------------HHHHHHHHHHHcC
Confidence 344445556667777777788888888877766655444332211111 1122223322211
Q ss_pred CCCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhh
Q 020832 108 QIPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFV 187 (321)
Q Consensus 108 ~~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl 187 (321)
+ ..++ ..+.++|+......+. +......+..+|.+++..+ ++.+|..++-
T Consensus 64 -----~----------~~~A-----------~~~~~~a~~~~~~~~~-~~~~~~~~~~l~~~~~~~~---~~~~A~~~~~ 113 (164)
T 3ro3_A 64 -----E----------FETA-----------SEYYKKTLLLARQLKD-RAVEAQSCYSLGNTYTLLQ---DYEKAIDYHL 113 (164)
T ss_dssp -----C----------HHHH-----------HHHHHHHHHHHHHTTC-HHHHHHHHHHHHHHHHHTT---CHHHHHHHHH
T ss_pred -----C----------HHHH-----------HHHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHh---hHHHHHHHHH
Confidence 0 1122 6677777777665432 1233567888999999999 9999997774
Q ss_pred cCCChHHHHHHHHHHhh-ccCCChhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHh
Q 020832 188 RGNNPEKFASTIVNFMG-KCYPGEDDLAVARAILMYLSLGNMKDANYIMDEVKKQV 242 (321)
Q Consensus 188 ~~~~~~~~a~~L~ew~~-~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f~~~~ 242 (321)
.+ ++... .+.+.............|+..|+...|...+....+..
T Consensus 114 ~a----------~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 159 (164)
T 3ro3_A 114 KH----------LAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEIS 159 (164)
T ss_dssp HH----------HHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HH----------HHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 32 11111 11111111122222334567899999999887766543
No 30
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=94.46 E-value=2.6 Score=37.75 Aligned_cols=133 Identities=13% Similarity=0.149 Sum_probs=72.9
Q ss_pred CCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhh---------------ccCCChhHHHHHHHHHHH
Q 020832 158 GSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMG---------------KCYPGEDDLAVARAILMY 222 (321)
Q Consensus 158 Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~---------------~~~~~e~dlfi~RaVL~~ 222 (321)
.++..|..+|..|...| ++.+|..+|-.+++++.+..+..-... +..|.....-++.+.+.+
T Consensus 99 ~~~~~~~~la~~~~~~g---~~~~Al~~l~~~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l 175 (291)
T 3mkr_A 99 TNTTFLLMAASIYFYDQ---NPDAALRTLHQGDSLECMAMTVQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSL 175 (291)
T ss_dssp SCHHHHHHHHHHHHHTT---CHHHHHHHHTTCCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCC---CHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHH
Confidence 36777777777777777 777777777665554422221111111 112333223333443333
Q ss_pred Hh-cCChhHHHHHHHHHHHHhhhhccCCCCChh-hhHHHHHHHHhccCChhHHHHHHHHhHHhhhcchhHHHHHHHHHHH
Q 020832 223 LS-LGNMKDANYIMDEVKKQVENKQLQLQPSDL-IQFVFYVLQTLERDALPLFNMLRANYKASIEREPAFNEMLDDIAEK 300 (321)
Q Consensus 223 L~-l~n~~~A~~~~~~f~~~~~~~~~~~~~~Pl-LnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l~rd~~~~~~L~~Ig~~ 300 (321)
+. .++...|..+|+...+.. |..|. +|-+.. .-++.+ -|..-.+.|+..|..+|.....+..+|..
T Consensus 176 ~~~~~~~~eA~~~~~~~l~~~-------p~~~~~~~~la~--~~~~~g---~~~eA~~~l~~al~~~p~~~~~l~~l~~~ 243 (291)
T 3mkr_A 176 AAGGEKLQDAYYIFQEMADKC-------SPTLLLLNGQAA--CHMAQG---RWEAAEGVLQEALDKDSGHPETLINLVVL 243 (291)
T ss_dssp HHCTTHHHHHHHHHHHHHHHS-------CCCHHHHHHHHH--HHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HhCchHHHHHHHHHHHHHHhC-------CCcHHHHHHHHH--HHHHcC---CHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 32 367777877776666532 22332 222222 222333 34446677888888888888888888877
Q ss_pred hcCCC
Q 020832 301 FFGVK 305 (321)
Q Consensus 301 yFgi~ 305 (321)
+....
T Consensus 244 ~~~~g 248 (291)
T 3mkr_A 244 SQHLG 248 (291)
T ss_dssp HHHTT
T ss_pred HHHcC
Confidence 76543
No 31
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=94.33 E-value=2.4 Score=36.75 Aligned_cols=91 Identities=9% Similarity=0.009 Sum_probs=49.5
Q ss_pred CChhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHhhhhccCC--CCC-hhhhHHHHHHHHhccCChhHHHHHHHHhHHhh
Q 020832 208 PGEDDLAVARAILMYLSLGNMKDANYIMDEVKKQVENKQLQL--QPS-DLIQFVFYVLQTLERDALPLFNMLRANYKASI 284 (321)
Q Consensus 208 ~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f~~~~~~~~~~~--~~~-PlLnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l 284 (321)
|.....+...+. .+...++...|...+....+..+...... +.. ..++.+..+. ...+. +..-.+.|+..+
T Consensus 190 ~~~~~~~~~l~~-~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~--~~~g~---~~~A~~~~~~a~ 263 (330)
T 3hym_B 190 PEDPFVMHEVGV-VAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVC--RKLKK---YAEALDYHRQAL 263 (330)
T ss_dssp TTCHHHHHHHHH-HHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHH--HHTTC---HHHHHHHHHHHH
T ss_pred CCChHHHHHHHH-HHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHH--HHhcC---HHHHHHHHHHHH
Confidence 444444554444 45678999999999988887665432221 111 1222211111 22232 333445566666
Q ss_pred hcchhHHHHHHHHHHHhcCC
Q 020832 285 EREPAFNEMLDDIAEKFFGV 304 (321)
Q Consensus 285 ~rd~~~~~~L~~Ig~~yFgi 304 (321)
+.+|.....+..+|..|+..
T Consensus 264 ~~~~~~~~~~~~la~~~~~~ 283 (330)
T 3hym_B 264 VLIPQNASTYSAIGYIHSLM 283 (330)
T ss_dssp HHSTTCSHHHHHHHHHHHHH
T ss_pred hhCccchHHHHHHHHHHHHh
Confidence 66666666667777777644
No 32
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=94.29 E-value=3.9 Score=39.14 Aligned_cols=21 Identities=24% Similarity=0.195 Sum_probs=13.9
Q ss_pred HHHhcCChhHHHHHHHHHHHH
Q 020832 221 MYLSLGNMKDANYIMDEVKKQ 241 (321)
Q Consensus 221 ~~L~l~n~~~A~~~~~~f~~~ 241 (321)
.|...|++..|...|+...+.
T Consensus 450 ~~~~~g~~~~A~~~~~~~~~~ 470 (597)
T 2xpi_A 450 QHMQLGNILLANEYLQSSYAL 470 (597)
T ss_dssp HHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHh
Confidence 345567777777777766543
No 33
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=94.14 E-value=3 Score=37.27 Aligned_cols=92 Identities=10% Similarity=0.032 Sum_probs=54.4
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCC-hhHHHHHH
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPG-EDDLAVAR 217 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~-e~dlfi~R 217 (321)
..+..+|++-..+.+. +......+..+|.+|+..+ ++.+|..+|-.+-. -.-..+.+. ....+...
T Consensus 167 ~~~~~~al~~~~~~~~-~~~~~~~~~~la~~~~~~g---~~~~A~~~~~~al~---------~~~~~~~~~~~~~~~~~l 233 (406)
T 3sf4_A 167 VDFYEENLSLVTALGD-RAAQGRAFGNLGNTHYLLG---NFRDAVIAHEQRLL---------IAKEFGDKAAERRAYSNL 233 (406)
T ss_dssp HHHHHHHHHHHHHTTC-HHHHHHHHHHHHHHHHHHT---BHHHHHHHHHHHHH---------HHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccC-cHHHHHHHHHHHHHHHHcc---CHHHHHHHHHHHHH---------HHHhcCCcHHHHHHHHHH
Confidence 5666777776655432 1233467888999999999 99999877643211 111111111 11122333
Q ss_pred HHHHHHhcCChhHHHHHHHHHHHHhhh
Q 020832 218 AILMYLSLGNMKDANYIMDEVKKQVEN 244 (321)
Q Consensus 218 aVL~~L~l~n~~~A~~~~~~f~~~~~~ 244 (321)
+ ..|...|+...|...++...+..+.
T Consensus 234 a-~~~~~~g~~~~A~~~~~~al~~~~~ 259 (406)
T 3sf4_A 234 G-NAYIFLGEFETASEYYKKTLLLARQ 259 (406)
T ss_dssp H-HHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred H-HHHHHcCChHHHHHHHHHHHHHHHh
Confidence 3 3356678899998888777765543
No 34
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=94.12 E-value=0.32 Score=39.54 Aligned_cols=45 Identities=7% Similarity=0.104 Sum_probs=32.6
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhh
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFV 187 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl 187 (321)
...+.+|+......+. +......+..+|.+++..| ++.+|..+|-
T Consensus 127 ~~~~~~al~~~~~~~~-~~~~~~~~~~la~~~~~~g---~~~~A~~~~~ 171 (203)
T 3gw4_A 127 RQEYEKSLVYAQQADD-QVAIACAFRGLGDLAQQEK---NLLEAQQHWL 171 (203)
T ss_dssp HHHHHHHHHHHHHTTC-HHHHHHHHHHHHHHHHHTT---CHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccc-hHHHHHHHHHHHHHHHHCc---CHHHHHHHHH
Confidence 6778888887765442 1223345688999999999 9999887775
No 35
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=93.98 E-value=2.9 Score=36.48 Aligned_cols=135 Identities=14% Similarity=0.047 Sum_probs=76.4
Q ss_pred CCHHHHHHHHHHHHhcCCCCChHHHhhHhhcC-----CChHH---HHHHHHH---------Hhh---ccCCChhHHHHH-
Q 020832 158 GSPELHVMLAEYLYSESPELDMARVSFHFVRG-----NNPEK---FASTIVN---------FMG---KCYPGEDDLAVA- 216 (321)
Q Consensus 158 Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~-----~~~~~---~a~~L~e---------w~~---~~~~~e~dlfi~- 216 (321)
.++..+..+|.++...+ ++.+|..+|-.. +++.. ++..... ++. +..|...+.+..
T Consensus 152 ~~~~~~~~~~~~~~~~~---~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 228 (359)
T 3ieg_A 152 WDAELRELRAECFIKEG---EPRKAISDLKAASKLKSDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHY 228 (359)
T ss_dssp TCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHTTCSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CchHHHHHHHHHHHHCC---CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCccchHHHHHH
Confidence 57899999999999999 999998887532 22332 2222111 111 112333222111
Q ss_pred ----------HHHHHHHhcCChhHHHHHHHHHHHHhhhhccCCCCChhhhH-HHHHH--HHhccCChhHHHHHHHHhHHh
Q 020832 217 ----------RAILMYLSLGNMKDANYIMDEVKKQVENKQLQLQPSDLIQF-VFYVL--QTLERDALPLFNMLRANYKAS 283 (321)
Q Consensus 217 ----------RaVL~~L~l~n~~~A~~~~~~f~~~~~~~~~~~~~~PlLnF-~~lLl--~t~e~~~~~~F~~L~~~Y~~~ 283 (321)
.....+...++...|...+....+..+ ..|.... +++.+ .-...+. +..-.+.|+..
T Consensus 229 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~~~~~la~~~~~~~~---~~~A~~~~~~~ 298 (359)
T 3ieg_A 229 KQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEP-------SVAEYTVRSKERICHCFSKDEK---PVEAIRICSEV 298 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-------SSHHHHHHHHHHHHHHHHHTTC---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC-------CchHHHHHHHHHHHHHHHHccC---HHHHHHHHHHH
Confidence 113346678999999988877766432 2222211 11111 1112232 44455667777
Q ss_pred hhcchhHHHHHHHHHHHhcCCC
Q 020832 284 IEREPAFNEMLDDIAEKFFGVK 305 (321)
Q Consensus 284 l~rd~~~~~~L~~Ig~~yFgi~ 305 (321)
++.+|.....+-.+|..|+...
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~g 320 (359)
T 3ieg_A 299 LQMEPDNVNALKDRAEAYLIEE 320 (359)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHhCcccHHHHHHHHHHHHHcC
Confidence 7777877778888888887654
No 36
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=93.65 E-value=2.8 Score=37.53 Aligned_cols=222 Identities=14% Similarity=0.094 Sum_probs=92.7
Q ss_pred HHHHHHHHhccCChhHHHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCCChhHH
Q 020832 17 NIDKLEKIVNEGNFYGAQQMYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAYDNENL 96 (321)
Q Consensus 17 ~l~rl~~~i~~G~~YEAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~~~~~ 96 (321)
.+.+-......|+|=+|.+.|+........ -.+.++.-+..+.+.|++..|.+.....++. .|-+....
T Consensus 68 ~~~~~~~~~~~g~~~~A~~~~~~al~~~p~------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-----~p~~~~~~ 136 (365)
T 4eqf_A 68 AFEEGLKRLKEGDLPVTILFMEAAILQDPG------DAEAWQFLGITQAENENEQAAIVALQRCLEL-----QPNNLKAL 136 (365)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCcC------CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc-----CCCCHHHH
Confidence 444455556666777776666665544321 1233444455555666666655554444332 12223334
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCC---CCCCHHHHHHHHHHHHhc
Q 020832 97 DRVRKIYELFPQIPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAP---KTGSPELHVMLAEYLYSE 173 (321)
Q Consensus 97 ~rl~~l~~~~p~~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~---~~Gdp~LH~~la~~~~~e 173 (321)
..+..++..... ..++ ...++++++-..+.... ..|.+.+...+|..+...
T Consensus 137 ~~l~~~~~~~g~---------------~~~A-----------~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~ 190 (365)
T 4eqf_A 137 MALAVSYTNTSH---------------QQDA-----------CEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDS 190 (365)
T ss_dssp HHHHHHHHHTTC---------------HHHH-----------HHHHHHHHHHCHHHHCC-------------------CC
T ss_pred HHHHHHHHcccc---------------HHHH-----------HHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhh
Confidence 444444432210 1222 44455555433222111 114566666777777777
Q ss_pred CCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCC--hhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHhhhhccCCCC
Q 020832 174 SPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPG--EDDLAVARAILMYLSLGNMKDANYIMDEVKKQVENKQLQLQP 251 (321)
Q Consensus 174 ~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~--e~dlfi~RaVL~~L~l~n~~~A~~~~~~f~~~~~~~~~~~~~ 251 (321)
+ ++.+|..+|-.. + + -.|. ..+.+...+. .|...|+...|...+....+..+. .
T Consensus 191 g---~~~~A~~~~~~a---------l-~----~~p~~~~~~~~~~l~~-~~~~~g~~~~A~~~~~~al~~~p~------~ 246 (365)
T 4eqf_A 191 S---VLEGVKELYLEA---------A-H----QNGDMIDPDLQTGLGV-LFHLSGEFNRAIDAFNAALTVRPE------D 246 (365)
T ss_dssp H---HHHHHHHHHHHH---------H-H----HSCSSCCHHHHHHHHH-HHHHHTCHHHHHHHHHHHHHHCTT------C
T ss_pred h---hHHHHHHHHHHH---------H-H----hCcCccCHHHHHHHHH-HHHHCCCHHHHHHHHHHHHHhCCC------C
Confidence 7 777776555321 0 0 0122 3333433332 334556666666666555543221 1
Q ss_pred ChhhhHHHHHHHHhccCChhHHHHHHHHhHHhhhcchhHHHHHHHHHHHhcCC
Q 020832 252 SDLIQFVFYVLQTLERDALPLFNMLRANYKASIEREPAFNEMLDDIAEKFFGV 304 (321)
Q Consensus 252 ~PlLnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l~rd~~~~~~L~~Ig~~yFgi 304 (321)
...++-+..+. ...+ -+..-.+.|+..++.+|.....+..+|..|+..
T Consensus 247 ~~~~~~l~~~~--~~~g---~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 294 (365)
T 4eqf_A 247 YSLWNRLGATL--ANGD---RSEEAVEAYTRALEIQPGFIRSRYNLGISCINL 294 (365)
T ss_dssp HHHHHHHHHHH--HHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH--HHcC---CHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHC
Confidence 11111111111 1112 233344555555555566555666666666544
No 37
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=93.53 E-value=2.4 Score=34.01 Aligned_cols=68 Identities=15% Similarity=0.054 Sum_probs=50.3
Q ss_pred CCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHHHHH
Q 020832 158 GSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYIMDE 237 (321)
Q Consensus 158 Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~ 237 (321)
.+++.+..+|.+|.+.+ ++.+|..+|-. .+ +-.|...+.+..++.+ |...|+...|...|+.
T Consensus 105 ~~~~~~~~lg~~~~~~g---~~~~A~~~~~~---------~l-----~~~p~~~~~~~~lg~~-~~~~g~~~~A~~~~~~ 166 (184)
T 3vtx_A 105 VYADAYYKLGLVYDSMG---EHDKAIEAYEK---------TI-----SIKPGFIRAYQSIGLA-YEGKGLRDEAVKYFKK 166 (184)
T ss_dssp TCHHHHHHHHHHHHHTT---CHHHHHHHHHH---------HH-----HHCTTCHHHHHHHHHH-HHHTTCHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHhC---CchhHHHHHHH---------HH-----HhcchhhhHHHHHHHH-HHHCCCHHHHHHHHHH
Confidence 47899999999999999 99999876632 11 1235556666666654 6788999999998887
Q ss_pred HHHHhh
Q 020832 238 VKKQVE 243 (321)
Q Consensus 238 f~~~~~ 243 (321)
-.+.-|
T Consensus 167 al~~~p 172 (184)
T 3vtx_A 167 ALEKEE 172 (184)
T ss_dssp HHHTTH
T ss_pred HHhCCc
Confidence 766443
No 38
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=93.48 E-value=3.6 Score=36.19 Aligned_cols=88 Identities=8% Similarity=-0.067 Sum_probs=50.6
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCC-ChhHHHHHH
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYP-GEDDLAVAR 217 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~-~e~dlfi~R 217 (321)
..+.++|++-....+..+.-.+..+.-+|.+|.+.+ +|.+|..+|-.+-+- ....+.. ....++. .
T Consensus 175 ~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~---~y~~Al~~~~kal~~---------~~~~~~~~~~~~~~~-~ 241 (293)
T 2qfc_A 175 IDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDS---RYEESLYQVNKAIEI---------SCRINSMALIGQLYY-Q 241 (293)
T ss_dssp HHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHH---------HHHTTBCSSHHHHHH-H
T ss_pred HHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHh---hHHHHHHHHHHHHHH---------HHhcCcHHHHHHHHH-H
Confidence 677788887665543211112257889999999999 999999887532211 0011111 2233333 3
Q ss_pred HHHHHHhcCChhHH-HHHHHHHH
Q 020832 218 AILMYLSLGNMKDA-NYIMDEVK 239 (321)
Q Consensus 218 aVL~~L~l~n~~~A-~~~~~~f~ 239 (321)
.-..|..+|+.+.| ...+..-.
T Consensus 242 lg~~y~~~g~~~~Ai~~~~~~Al 264 (293)
T 2qfc_A 242 RGECLRKLEYEEAEIEDAYKKAS 264 (293)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCcHHHHHHHHHHHH
Confidence 33445677888777 55555443
No 39
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=92.85 E-value=4.3 Score=35.02 Aligned_cols=248 Identities=13% Similarity=0.102 Sum_probs=128.8
Q ss_pred HHHHHHHHHHhccCChhHHHHHHHHHHHH--------------HhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHH
Q 020832 15 QENIDKLEKIVNEGNFYGAQQMYKSISAR--------------YVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSF 80 (321)
Q Consensus 15 ~r~l~rl~~~i~~G~~YEAhQ~~RTl~~R--------------y~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~l 80 (321)
...+.+-...+..|+|=+|.+.++..... |...+++++|++.+.+.... .-+. .+....+
T Consensus 22 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~--~~~~----~~~~~~l 95 (327)
T 3cv0_A 22 ENPMEEGLSMLKLANLAEAALAFEAVCQAAPEREEAWRSLGLTQAENEKDGLAIIALNHARML--DPKD----IAVHAAL 95 (327)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTC----HHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--CcCC----HHHHHHH
Confidence 34456667778889998998888776543 34566777777776654432 0011 2222333
Q ss_pred HHHHhhCCCCCChhHHHHHHHHHHhCCCCCCCCCCCC-----CchhHHHHHH-HhhhhhhhhhhhHHHHHHHHHhhhcCC
Q 020832 81 VEALVKGKVAYDNENLDRVRKIYELFPQIPVPHNLED-----DDDLHELTEA-LGAAKLRVEGCSSFLKAAIKWSIEFGA 154 (321)
Q Consensus 81 vev~~~~~~~~~~~~~~rl~~l~~~~p~~~~~r~l~~-----~~~~~~~~e~-~~~~~~~~~~~~~fl~~ai~WS~~~g~ 154 (321)
..++...+- -++.+.-+.+.+...|........-. ......+--. ........+...+++.++++...
T Consensus 96 a~~~~~~~~--~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~---- 169 (327)
T 3cv0_A 96 AVSHTNEHN--ANAALASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALEMNP---- 169 (327)
T ss_dssp HHHHHHTTC--HHHHHHHHHHHHHTSTTTTTC--------------------CCTTSHHHHHHHHHHHHHHHHHST----
T ss_pred HHHHHHcCC--HHHHHHHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHHHHHHHHHHHhhCC----
Confidence 344443331 12334444455554443332110000 0000000000 00001111122556666665432
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHH
Q 020832 155 PKTGSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYI 234 (321)
Q Consensus 155 ~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~ 234 (321)
.++..+..+|.++.+.+ ++.+|..+|-..- +..|.....+...+. .+...++...|...
T Consensus 170 ---~~~~~~~~la~~~~~~~---~~~~A~~~~~~~~--------------~~~~~~~~~~~~l~~-~~~~~~~~~~A~~~ 228 (327)
T 3cv0_A 170 ---NDAQLHASLGVLYNLSN---NYDSAAANLRRAV--------------ELRPDDAQLWNKLGA-TLANGNRPQEALDA 228 (327)
T ss_dssp ---TCHHHHHHHHHHHHHTT---CHHHHHHHHHHHH--------------HHCTTCHHHHHHHHH-HHHHTTCHHHHHHH
T ss_pred ---CCHHHHHHHHHHHHHhc---cHHHHHHHHHHHH--------------HhCCCcHHHHHHHHH-HHHHcCCHHHHHHH
Confidence 37899999999999999 9999987764321 112344444544444 34668999999988
Q ss_pred HHHHHHHhhhhccCCCCChhhhHHHHHHHHhccCChhHHHHHHHHhHHhhhcchh------------HHHHHHHHHHHhc
Q 020832 235 MDEVKKQVENKQLQLQPSDLIQFVFYVLQTLERDALPLFNMLRANYKASIEREPA------------FNEMLDDIAEKFF 302 (321)
Q Consensus 235 ~~~f~~~~~~~~~~~~~~PlLnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l~rd~~------------~~~~L~~Ig~~yF 302 (321)
+....+..+ ..+...+ .+-..-...+. +..-.+.|+..++.+|. .......+|..|.
T Consensus 229 ~~~a~~~~~-------~~~~~~~-~l~~~~~~~g~---~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 297 (327)
T 3cv0_A 229 YNRALDINP-------GYVRVMY-NMAVSYSNMSQ---YDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLN 297 (327)
T ss_dssp HHHHHHHCT-------TCHHHHH-HHHHHHHHTTC---HHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHH
T ss_pred HHHHHHcCC-------CCHHHHH-HHHHHHHHhcc---HHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHH
Confidence 877665322 1221111 11111122233 44455666666766777 7778888888888
Q ss_pred CCCC
Q 020832 303 GVKR 306 (321)
Q Consensus 303 gi~~ 306 (321)
....
T Consensus 298 ~~g~ 301 (327)
T 3cv0_A 298 VMNR 301 (327)
T ss_dssp HTTC
T ss_pred hcCC
Confidence 7653
No 40
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=92.84 E-value=3 Score=34.45 Aligned_cols=25 Identities=16% Similarity=0.038 Sum_probs=15.0
Q ss_pred CHHHHHHHHHHHHhcCCCCChHHHhhHh
Q 020832 159 SPELHVMLAEYLYSESPELDMARVSFHF 186 (321)
Q Consensus 159 dp~LH~~la~~~~~e~~~~~~~~A~~Hf 186 (321)
++..+..+|.++...+ ++.+|..++
T Consensus 124 ~~~~~~~~a~~~~~~~---~~~~A~~~~ 148 (243)
T 2q7f_A 124 NGDLFYMLGTVLVKLE---QPKLALPYL 148 (243)
T ss_dssp SHHHHHHHHHHHHHTS---CHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhc---cHHHHHHHH
Confidence 4556666666666666 666655554
No 41
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=92.69 E-value=4.1 Score=34.42 Aligned_cols=164 Identities=10% Similarity=0.096 Sum_probs=92.0
Q ss_pred HHHHHHhccCChhHHHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCCChhHHHH
Q 020832 19 DKLEKIVNEGNFYGAQQMYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAYDNENLDR 98 (321)
Q Consensus 19 ~rl~~~i~~G~~YEAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~~~~~~r 98 (321)
.+-...+..|+|=+|.+.++......... .+.++.-+..+.+.|++..|.+.....++ .. .+..+.......
T Consensus 8 ~~a~~~~~~~~~~~A~~~~~~~l~~~p~~------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~-~~~~~~~~~~~~ 79 (272)
T 3u4t_A 8 RYADFLFKNNNYAEAIEVFNKLEAKKYNS------PYIYNRRAVCYYELAKYDLAQKDIETYFS-KV-NATKAKSADFEY 79 (272)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHTTCCC------STTHHHHHHHHHHTTCHHHHHHHHHHHHT-TS-CTTTCCHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHHhhHHHHHHHHHHHHh-cc-CchhHHHHHHHH
Confidence 33455567777777777777766543221 22344445566777777777666544444 11 111222223445
Q ss_pred HHHHHHhCCCCCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCC
Q 020832 99 VRKIYELFPQIPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELD 178 (321)
Q Consensus 99 l~~l~~~~p~~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~ 178 (321)
+..++..... .+++ .+.++++++-.. .++..+..+|.+|...+ +
T Consensus 80 lg~~~~~~~~---------------~~~A-----------~~~~~~a~~~~~-------~~~~~~~~l~~~~~~~~---~ 123 (272)
T 3u4t_A 80 YGKILMKKGQ---------------DSLA-----------IQQYQAAVDRDT-------TRLDMYGQIGSYFYNKG---N 123 (272)
T ss_dssp HHHHHHHTTC---------------HHHH-----------HHHHHHHHHHST-------TCTHHHHHHHHHHHHTT---C
T ss_pred HHHHHHHccc---------------HHHH-----------HHHHHHHHhcCc-------ccHHHHHHHHHHHHHcc---C
Confidence 5555543210 1222 566666666332 36789999999999999 9
Q ss_pred hHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHHHHHHHHH
Q 020832 179 MARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYIMDEVKKQ 241 (321)
Q Consensus 179 ~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f~~~ 241 (321)
+.+|..+|-.+-.- .|.....+..++...|.. ++...|...+....+.
T Consensus 124 ~~~A~~~~~~al~~--------------~~~~~~~~~~l~~~~~~~-~~~~~A~~~~~~a~~~ 171 (272)
T 3u4t_A 124 FPLAIQYMEKQIRP--------------TTTDPKVFYELGQAYYYN-KEYVKADSSFVKVLEL 171 (272)
T ss_dssp HHHHHHHHGGGCCS--------------SCCCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhc--------------CCCcHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHh
Confidence 99999888643321 233344445555333332 3777777766665543
No 42
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=92.17 E-value=3.7 Score=36.73 Aligned_cols=37 Identities=16% Similarity=0.101 Sum_probs=24.9
Q ss_pred CChhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHhhhh
Q 020832 208 PGEDDLAVARAILMYLSLGNMKDANYIMDEVKKQVENK 245 (321)
Q Consensus 208 ~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f~~~~~~~ 245 (321)
|.....+...+. .|...|+...|...+....+..++.
T Consensus 278 p~~~~~~~~l~~-~~~~~g~~~~A~~~~~~al~~~~~~ 314 (365)
T 4eqf_A 278 PGFIRSRYNLGI-SCINLGAYREAVSNFLTALSLQRKS 314 (365)
T ss_dssp TTCHHHHHHHHH-HHHHHTCCHHHHHHHHHHHHHHHCC
T ss_pred CCchHHHHHHHH-HHHHCCCHHHHHHHHHHHHHhCccc
Confidence 444444444443 3567799999999998888766643
No 43
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=92.09 E-value=3.4 Score=32.11 Aligned_cols=80 Identities=15% Similarity=0.111 Sum_probs=51.7
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHH
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARA 218 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~Ra 218 (321)
...++++++-. -.++..+..+|.++...+ ++.+|..+|-.. + .. .|.....+...
T Consensus 96 ~~~~~~~~~~~-------~~~~~~~~~~a~~~~~~~---~~~~A~~~~~~~---------~----~~-~~~~~~~~~~l- 150 (186)
T 3as5_A 96 VPLLIKVAEAN-------PINFNVRFRLGVALDNLG---RFDEAIDSFKIA---------L----GL-RPNEGKVHRAI- 150 (186)
T ss_dssp HHHHHHHHHHC-------TTCHHHHHHHHHHHHHTT---CHHHHHHHHHHH---------H----HH-CTTCHHHHHHH-
T ss_pred HHHHHHHHhcC-------cHhHHHHHHHHHHHHHcC---cHHHHHHHHHHH---------H----hc-CccchHHHHHH-
Confidence 45555555432 247889999999999999 998888665321 1 11 13333333333
Q ss_pred HHHHHhcCChhHHHHHHHHHHHHhh
Q 020832 219 ILMYLSLGNMKDANYIMDEVKKQVE 243 (321)
Q Consensus 219 VL~~L~l~n~~~A~~~~~~f~~~~~ 243 (321)
...+...|+...|...+....+..+
T Consensus 151 a~~~~~~~~~~~A~~~~~~~~~~~~ 175 (186)
T 3as5_A 151 AFSYEQMGRHEEALPHFKKANELDE 175 (186)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 3345678999999999888876554
No 44
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=91.87 E-value=7 Score=35.24 Aligned_cols=118 Identities=14% Similarity=0.152 Sum_probs=74.5
Q ss_pred CCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHHHHH
Q 020832 158 GSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYIMDE 237 (321)
Q Consensus 158 Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~ 237 (321)
.+|..+..+|..+.+.| ++.+|..+|-. ++ +..|...+.+...+.+ +...|+...|...++.
T Consensus 269 ~~~~~~~~l~~~~~~~g---~~~~A~~~~~~---------al-----~~~p~~~~~~~~l~~~-~~~~g~~~~A~~~~~~ 330 (388)
T 1w3b_A 269 HFPDAYCNLANALKEKG---SVAEAEDCYNT---------AL-----RLCPTHADSLNNLANI-KREQGNIEEAVRLYRK 330 (388)
T ss_dssp SCHHHHHHHHHHHHHHS---CHHHHHHHHHH---------HH-----HHCTTCHHHHHHHHHH-HHTTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcC---CHHHHHHHHHH---------HH-----hhCcccHHHHHHHHHH-HHHcCCHHHHHHHHHH
Confidence 47889999999999999 99999866532 11 1124445555544443 5678999999888766
Q ss_pred HHHHhhhhccCCCCChhhhHHHHHHHHhccCChhHHHHHHHHhHHhhhcchhHHHHHHHHHHHhcCC
Q 020832 238 VKKQVENKQLQLQPSDLIQFVFYVLQTLERDALPLFNMLRANYKASIEREPAFNEMLDDIAEKFFGV 304 (321)
Q Consensus 238 f~~~~~~~~~~~~~~PlLnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l~rd~~~~~~L~~Ig~~yFgi 304 (321)
..+.. |..+...+ .+...-+..+. +..-.+.|+..++.+|.+...+..+|..|..+
T Consensus 331 al~~~-------p~~~~~~~-~l~~~~~~~g~---~~~A~~~~~~a~~~~p~~~~a~~~lg~~~~~~ 386 (388)
T 1w3b_A 331 ALEVF-------PEFAAAHS-NLASVLQQQGK---LQEALMHYKEAIRISPTFADAYSNMGNTLKEM 386 (388)
T ss_dssp HTTSC-------TTCHHHHH-HHHHHHHTTTC---CHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHT
T ss_pred HHhcC-------CCcHHHHH-HHHHHHHHcCC---HHHHHHHHHHHHhhCCCCHHHHHhHHHHHHHc
Confidence 55421 22222211 11112223333 33455777888888999999999999887643
No 45
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=91.34 E-value=5.8 Score=33.31 Aligned_cols=208 Identities=10% Similarity=-0.068 Sum_probs=106.1
Q ss_pred cCChhHHHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHhC
Q 020832 27 EGNFYGAQQMYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAYDNENLDRVRKIYELF 106 (321)
Q Consensus 27 ~G~~YEAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~~~~~~rl~~l~~~~ 106 (321)
+|+|=+|.+.++.+..+.. .....-.+.++.-+..+...|++..|.+.....++. .|-+......+..++...
T Consensus 18 ~~~~~~A~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~-----~~~~~~~~~~la~~~~~~ 90 (275)
T 1xnf_A 18 TLQQEVILARMEQILASRA--LTDDERAQLLYERGVLYDSLGLRALARNDFSQALAI-----RPDMPEVFNYLGIYLTQA 90 (275)
T ss_dssp CHHHHHHHHHHHHHHTSSC--CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CCCCHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHhccc--ccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHc-----CCCcHHHHHHHHHHHHHc
Confidence 3445555555554443311 112233444445555555555555555444433332 122334445555555432
Q ss_pred CCCCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHh
Q 020832 107 PQIPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHF 186 (321)
Q Consensus 107 p~~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hf 186 (321)
. + .+++ .+++++|++-. -.++..+..+|.+|...+ ++.+|..+|
T Consensus 91 ~-----~----------~~~A-----------~~~~~~al~~~-------~~~~~~~~~la~~~~~~g---~~~~A~~~~ 134 (275)
T 1xnf_A 91 G-----N----------FDAA-----------YEAFDSVLELD-------PTYNYAHLNRGIALYYGG---RDKLAQDDL 134 (275)
T ss_dssp T-----C----------HHHH-----------HHHHHHHHHHC-------TTCTHHHHHHHHHHHHTT---CHHHHHHHH
T ss_pred c-----C----------HHHH-----------HHHHHHHHhcC-------ccccHHHHHHHHHHHHhc---cHHHHHHHH
Confidence 1 0 1222 56677777642 136789999999999999 999998766
Q ss_pred hcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHhhhhccCCCCChhhhHHHHHHHHhc
Q 020832 187 VRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYIMDEVKKQVENKQLQLQPSDLIQFVFYVLQTLE 266 (321)
Q Consensus 187 l~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f~~~~~~~~~~~~~~PlLnF~~lLl~t~e 266 (321)
-.+-. ..|......+..++. ...++...|...+.......+ +.....+ +....+.
T Consensus 135 ~~a~~--------------~~~~~~~~~~~~~~~--~~~~~~~~A~~~~~~~~~~~~------~~~~~~~---~~~~~~~ 189 (275)
T 1xnf_A 135 LAFYQ--------------DDPNDPFRSLWLYLA--EQKLDEKQAKEVLKQHFEKSD------KEQWGWN---IVEFYLG 189 (275)
T ss_dssp HHHHH--------------HCTTCHHHHHHHHHH--HHHHCHHHHHHHHHHHHHHSC------CCSTHHH---HHHHHTT
T ss_pred HHHHH--------------hCCCChHHHHHHHHH--HHhcCHHHHHHHHHHHHhcCC------cchHHHH---HHHHHHH
Confidence 43211 112222222222222 445888888888766555322 1112222 2222233
Q ss_pred cCChhHHHHHHHHhHHhhhcchhH----HHHHHHHHHHhcCCC
Q 020832 267 RDALPLFNMLRANYKASIEREPAF----NEMLDDIAEKFFGVK 305 (321)
Q Consensus 267 ~~~~~~F~~L~~~Y~~~l~rd~~~----~~~L~~Ig~~yFgi~ 305 (321)
.... ..-.+.|...++.+|.. ......+|..|+...
T Consensus 190 ~~~~---~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g 229 (275)
T 1xnf_A 190 NISE---QTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLG 229 (275)
T ss_dssp SSCH---HHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hcCH---HHHHHHHHHHhcccccccccccHHHHHHHHHHHHcC
Confidence 3332 33445566666665543 466777888887654
No 46
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=91.15 E-value=9.4 Score=35.32 Aligned_cols=233 Identities=8% Similarity=0.017 Sum_probs=120.1
Q ss_pred cCChhHHHHHHHHHHHHH---h--hhhC---HHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCCChhHHHH
Q 020832 27 EGNFYGAQQMYKSISARY---V--AAQR---YSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAYDNENLDR 98 (321)
Q Consensus 27 ~G~~YEAhQ~~RTl~~Ry---~--~~~k---~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~~~~~~r 98 (321)
.|+|=+|...++....++ . .... ...-.+.++.-+..+...|++..+.++....++. ... ......
T Consensus 202 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~---~~~---~~~~~~ 275 (514)
T 2gw1_A 202 PESYDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFLKNDPLGAHEDIKKAIEL---FPR---VNSYIY 275 (514)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHH---CCC---HHHHHH
T ss_pred hccHHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhh---Ccc---HHHHHH
Confidence 788888888887777654 2 0001 1344555666666777777777766665444432 111 333344
Q ss_pred HHHHHHhCCCCCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCC
Q 020832 99 VRKIYELFPQIPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELD 178 (321)
Q Consensus 99 l~~l~~~~p~~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~ 178 (321)
+..++.....-+ .....++++++.. -.++..+..+|.++...+ +
T Consensus 276 l~~~~~~~~~~~--------------------------~A~~~~~~~~~~~-------~~~~~~~~~l~~~~~~~~---~ 319 (514)
T 2gw1_A 276 MALIMADRNDST--------------------------EYYNYFDKALKLD-------SNNSSVYYHRGQMNFILQ---N 319 (514)
T ss_dssp HHHHHHTSSCCT--------------------------TGGGHHHHHHTTC-------TTCTHHHHHHHHHHHHTT---C
T ss_pred HHHHHHHCCCHH--------------------------HHHHHHHHHhhcC-------cCCHHHHHHHHHHHHHhC---C
Confidence 444443322111 0134444444321 134566777777777777 6
Q ss_pred hHHHhhHhhcC-----CChHHHHHHHHH------------Hhh---ccCCChhHHHHHHHHHHHHhcCChhHHHHHHHHH
Q 020832 179 MARVSFHFVRG-----NNPEKFASTIVN------------FMG---KCYPGEDDLAVARAILMYLSLGNMKDANYIMDEV 238 (321)
Q Consensus 179 ~~~A~~Hfl~~-----~~~~~~a~~L~e------------w~~---~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f 238 (321)
+.+|..+|-.. +++..+..+-.- ++. +..|...+.+...+ ..|...|+...|...+...
T Consensus 320 ~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la-~~~~~~~~~~~A~~~~~~a 398 (514)
T 2gw1_A 320 YDQAGKDFDKAKELDPENIFPYIQLACLAYRENKFDDCETLFSEAKRKFPEAPEVPNFFA-EILTDKNDFDKALKQYDLA 398 (514)
T ss_dssp TTHHHHHHHHHHHTCSSCSHHHHHHHHHTTTTTCHHHHHHHHHHHHHHSTTCSHHHHHHH-HHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHcccCHHHHHHHH-HHHHHCCCHHHHHHHHHHH
Confidence 66666666421 122211111000 000 11233444444443 3457789999999998887
Q ss_pred HHHhhhhccCCC-CChhhhHHHHHHHHhccCChhHHHHHHHHhHHhhhcchhHHHHHHHHHHHhcCCC
Q 020832 239 KKQVENKQLQLQ-PSDLIQFVFYVLQTLERDALPLFNMLRANYKASIEREPAFNEMLDDIAEKFFGVK 305 (321)
Q Consensus 239 ~~~~~~~~~~~~-~~PlLnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l~rd~~~~~~L~~Ig~~yFgi~ 305 (321)
.+..+....... ...+.+....+ .......-+..-.+.|+..++.+|........+|..|+...
T Consensus 399 ~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g 463 (514)
T 2gw1_A 399 IELENKLDGIYVGIAPLVGKATLL---TRNPTVENFIEATNLLEKASKLDPRSEQAKIGLAQMKLQQE 463 (514)
T ss_dssp HHHHHTSSSCSSCSHHHHHHHHHH---HTSCCTTHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHhhhccchHHHHHHHHHHHHHHH---hhhhhcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhc
Confidence 765543211000 00222222211 11000334556667777777778887788888888888654
No 47
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=90.85 E-value=2.8 Score=32.48 Aligned_cols=111 Identities=14% Similarity=0.127 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHHHHHHHH
Q 020832 161 ELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYIMDEVKK 240 (321)
Q Consensus 161 ~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f~~ 240 (321)
+-|.-.|..|++.| +|.+|..+|-.+ + +-.|...+.+..++.. |+.+|+...|...++.-++
T Consensus 14 ~~~~~~G~~~~~~g---~~~~A~~~~~~a---------l-----~~~p~~~~~~~~~~~~-~~~~~~~~~A~~~~~~al~ 75 (126)
T 4gco_A 14 QEEKNKGNEYFKKG---DYPTAMRHYNEA---------V-----KRDPENAILYSNRAAC-LTKLMEFQRALDDCDTCIR 75 (126)
T ss_dssp HHHHHHHHHHHHTT---CHHHHHHHHHHH---------H-----HHCTTCHHHHHHHHHH-HHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC---CHHHHHHHHHHH---------H-----HhCCCCHHHHHHHhhH-HHhhccHHHHHHHHHHHHH
Confidence 55888999999999 999999877321 1 1235666677777654 5788999999998877665
Q ss_pred HhhhhccCCCCChhhhHHHHHHHHhccCChhHHHHHHHHhHHhhhcchhHHHHHHHHHHH
Q 020832 241 QVENKQLQLQPSDLIQFVFYVLQTLERDALPLFNMLRANYKASIEREPAFNEMLDDIAEK 300 (321)
Q Consensus 241 ~~~~~~~~~~~~PlLnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l~rd~~~~~~L~~Ig~~ 300 (321)
.-+ . ....+.|... +... ..-|..-.+.|+..|+-||...+....|+..
T Consensus 76 ~~p----~-~~~a~~~lg~-~~~~-----~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~ 124 (126)
T 4gco_A 76 LDS----K-FIKGYIRKAA-CLVA-----MREWSKAQRAYEDALQVDPSNEEAREGVRNC 124 (126)
T ss_dssp HCT----T-CHHHHHHHHH-HHHH-----TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hhh----h-hhHHHHHHHH-HHHH-----CCCHHHHHHHHHHHHHHCcCCHHHHHHHHHh
Confidence 321 1 1112222222 2222 2345667788999999999988888888764
No 48
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=90.63 E-value=8.2 Score=33.80 Aligned_cols=91 Identities=9% Similarity=0.011 Sum_probs=56.9
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhh-cc-CCChhHHHHH
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMG-KC-YPGEDDLAVA 216 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~-~~-~~~e~dlfi~ 216 (321)
..+..+|++-..+.+..+.+.+.++.-+|.+|++.+ +|.+|..++-.+ .+... .+ ......++..
T Consensus 175 ~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~---~y~~A~~~~~~a----------l~~~~~~~~~~~~~~~~~~ 241 (293)
T 3u3w_A 175 IDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDS---RYEESLYQVNKA----------IEISCRINSMALIGQLYYQ 241 (293)
T ss_dssp HHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHH----------HHHHHHTTBCTTHHHHHHH
T ss_pred HHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHh---HHHHHHHHHHHH----------HHHHHHcCcHHHHHHHHHH
Confidence 667777777665543233345567889999999999 999999776432 22222 12 2234555555
Q ss_pred HHHHHHHhcCC-hhHHHHHHHHHHHHhh
Q 020832 217 RAILMYLSLGN-MKDANYIMDEVKKQVE 243 (321)
Q Consensus 217 RaVL~~L~l~n-~~~A~~~~~~f~~~~~ 243 (321)
.+.. |..+|+ ...|...+..-.....
T Consensus 242 lg~~-~~~~g~~~~~A~~~~~~Al~i~~ 268 (293)
T 3u3w_A 242 RGEC-LRKLEYEEAEIEDAYKKASFFFD 268 (293)
T ss_dssp HHHH-HHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHH-HHHhCCcHHHHHHHHHHHHHHHH
Confidence 5554 455674 5888887776665443
No 49
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=90.48 E-value=6.6 Score=34.44 Aligned_cols=130 Identities=15% Similarity=0.029 Sum_probs=74.2
Q ss_pred ccCChhHHHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCCChh----HHHHHHH
Q 020832 26 NEGNFYGAQQMYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAYDNE----NLDRVRK 101 (321)
Q Consensus 26 ~~G~~YEAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~~~----~~~rl~~ 101 (321)
..|+|=+|.+.++-...-....+.+...+.++..-+....+.|++..|.+.....++.+.+... +.. ....+..
T Consensus 127 ~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~--~~~~~~~~~~nlg~ 204 (293)
T 3u3w_A 127 KKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHD--NEEFDVKVRYNHAK 204 (293)
T ss_dssp TSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSC--CHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhccc--chhHHHHHHHHHHH
Confidence 3445555555554444422222222223334444455556667777776666666665555411 211 2234444
Q ss_pred HHHhCCCCCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCCh-H
Q 020832 102 IYELFPQIPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDM-A 180 (321)
Q Consensus 102 l~~~~p~~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~-~ 180 (321)
++.... +.++| ..+.++|++.+.+.+. ..+-+.++..+|.+|.+.| +. .
T Consensus 205 ~y~~~~---------------~y~~A-----------~~~~~~al~~~~~~~~-~~~~~~~~~~lg~~~~~~g---~~~~ 254 (293)
T 3u3w_A 205 ALYLDS---------------RYEES-----------LYQVNKAIEISCRINS-MALIGQLYYQRGECLRKLE---YEEA 254 (293)
T ss_dssp HHHHTT---------------CHHHH-----------HHHHHHHHHHHHHTTB-CTTHHHHHHHHHHHHHHTT---CCHH
T ss_pred HHHHHh---------------HHHHH-----------HHHHHHHHHHHHHcCc-HHHHHHHHHHHHHHHHHhC---CcHH
Confidence 443221 01222 7889999999987654 3566789999999999988 64 7
Q ss_pred HHhhHhh
Q 020832 181 RVSFHFV 187 (321)
Q Consensus 181 ~A~~Hfl 187 (321)
+|..+|-
T Consensus 255 ~A~~~~~ 261 (293)
T 3u3w_A 255 EIEDAYK 261 (293)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8887764
No 50
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=90.32 E-value=6.9 Score=32.44 Aligned_cols=134 Identities=10% Similarity=0.008 Sum_probs=86.3
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHH
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARA 218 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~Ra 218 (321)
..+.+++++-.. ..++..+..+|.++...+ ++.+|..+|-.+- +..|...+.+..++
T Consensus 27 ~~~~~~al~~~~------~~~~~~~~~~~~~~~~~~---~~~~A~~~~~~al--------------~~~p~~~~~~~~l~ 83 (228)
T 4i17_A 27 FEKYSEYLKLTN------NQDSVTAYNCGVCADNIK---KYKEAADYFDIAI--------------KKNYNLANAYIGKS 83 (228)
T ss_dssp HHHHHHHHHHTT------TCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHH--------------HTTCSHHHHHHHHH
T ss_pred HHHHHHHHhccC------CCCcHHHHHHHHHHHHhh---cHHHHHHHHHHHH--------------HhCcchHHHHHHHH
Confidence 555666665432 246788888999999999 9999987764221 22345555566665
Q ss_pred HHHHHhcCChhHHHHHHHHHHHHhhhhccCCCCChhh--hH--HHHHHHHhccCChhHHHHHHHHhHHhhhcchh--HHH
Q 020832 219 ILMYLSLGNMKDANYIMDEVKKQVENKQLQLQPSDLI--QF--VFYVLQTLERDALPLFNMLRANYKASIEREPA--FNE 292 (321)
Q Consensus 219 VL~~L~l~n~~~A~~~~~~f~~~~~~~~~~~~~~PlL--nF--~~lLl~t~e~~~~~~F~~L~~~Y~~~l~rd~~--~~~ 292 (321)
.+ |...++...|...+....+..| ..|.+ +. +++.+-.+. ....-|..-.+.|+..++.+|. ...
T Consensus 84 ~~-~~~~~~~~~A~~~~~~al~~~p-------~~~~~~~~~~~~~~~~g~~~-~~~~~~~~A~~~~~~al~~~p~~~~~~ 154 (228)
T 4i17_A 84 AA-YRDMKNNQEYIATLTEGIKAVP-------GNATIEKLYAIYYLKEGQKF-QQAGNIEKAEENYKHATDVTSKKWKTD 154 (228)
T ss_dssp HH-HHHTTCHHHHHHHHHHHHHHST-------TCHHHHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHTTSSCHHHHHH
T ss_pred HH-HHHcccHHHHHHHHHHHHHHCC-------CcHHHHHHHHHHHHHHhHHH-HHhccHHHHHHHHHHHHhcCCCcccHH
Confidence 54 5778999999998887776433 22211 00 111111111 1123456677889999999999 899
Q ss_pred HHHHHHHHhcCC
Q 020832 293 MLDDIAEKFFGV 304 (321)
Q Consensus 293 ~L~~Ig~~yFgi 304 (321)
.+..+|..|+..
T Consensus 155 ~~~~l~~~~~~~ 166 (228)
T 4i17_A 155 ALYSLGVLFYNN 166 (228)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999854
No 51
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=90.18 E-value=6.6 Score=37.69 Aligned_cols=29 Identities=10% Similarity=0.104 Sum_probs=15.5
Q ss_pred HHHHHHhHHhhhcchhHHHHHHHHHHHhc
Q 020832 274 NMLRANYKASIEREPAFNEMLDDIAEKFF 302 (321)
Q Consensus 274 ~~L~~~Y~~~l~rd~~~~~~L~~Ig~~yF 302 (321)
..-.+.|+..++.+|........+|..+.
T Consensus 275 ~~A~~~~~~al~l~p~~~~a~~~l~~~~~ 303 (474)
T 4abn_A 275 GEALEGFSQAAALDPAWPEPQQREQQLLE 303 (474)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 33445555555555555555555555444
No 52
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=90.14 E-value=1.6 Score=34.89 Aligned_cols=65 Identities=9% Similarity=-0.037 Sum_probs=46.9
Q ss_pred CHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHHHHHH
Q 020832 159 SPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYIMDEV 238 (321)
Q Consensus 159 dp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f 238 (321)
+|..|..+|.+|++.+ +|.+|..+|-.+- +-.|...+.+..++.+ |...++...|...|...
T Consensus 30 ~~~~~~~la~~y~~~~---~~~~A~~~~~~al--------------~~~p~~~~a~~~lg~~-~~~~~~~~~A~~~~~~a 91 (150)
T 4ga2_A 30 KSIKGFYFAKLYYEAK---EYDLAKKYICTYI--------------NVQERDPKAHRFLGLL-YELEENTDKAVECYRRS 91 (150)
T ss_dssp HHTTHHHHHHHHHHTT---CHHHHHHHHHHHH--------------HHCTTCHHHHHHHHHH-HHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcC---CHHHHHHHHHHHH--------------HhCCCCHHHHHHHHHH-HHHcCchHHHHHHHHHH
Confidence 5567889999999999 9999997764211 1134555556666654 56789999999988776
Q ss_pred HHH
Q 020832 239 KKQ 241 (321)
Q Consensus 239 ~~~ 241 (321)
++.
T Consensus 92 l~~ 94 (150)
T 4ga2_A 92 VEL 94 (150)
T ss_dssp HHH
T ss_pred HHh
Confidence 653
No 53
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=89.92 E-value=1.7 Score=38.41 Aligned_cols=143 Identities=13% Similarity=-0.021 Sum_probs=83.5
Q ss_pred HHHHHHHHHHhccCChhHHHHHHHHHH--------------------HHHhhhhCHHHHHHHHHHHH-------------
Q 020832 15 QENIDKLEKIVNEGNFYGAQQMYKSIS--------------------ARYVAAQRYSEALDLLHAGA------------- 61 (321)
Q Consensus 15 ~r~l~rl~~~i~~G~~YEAhQ~~RTl~--------------------~Ry~~~~k~~eAi~lL~~ga------------- 61 (321)
...+.++...+..|+|=+|.+.+.... .-|...++|++|++.+.++.
T Consensus 76 ~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~ 155 (293)
T 2qfc_A 76 KQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNL 155 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHH
Confidence 344567778899999988887775322 22355679999998776553
Q ss_pred -------HHHHHCCCcchHHHHHHHHHHHHhhCCCCCC--hhHHHHHHHHHHhCCCCCCCCCCCCCchhHHHHHHHhhhh
Q 020832 62 -------CLQLKNNQLTCGAELAVSFVEALVKGKVAYD--NENLDRVRKIYELFPQIPVPHNLEDDDDLHELTEALGAAK 132 (321)
Q Consensus 62 -------~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~--~~~~~rl~~l~~~~p~~~~~r~l~~~~~~~~~~e~~~~~~ 132 (321)
..+.+.|++..|.+.....++.++....... ......+..++.... +.+||
T Consensus 156 ~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~---------------~y~~A----- 215 (293)
T 2qfc_A 156 YIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDS---------------RYEES----- 215 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTT---------------CHHHH-----
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHh---------------hHHHH-----
Confidence 2333444444444444333333333221000 011222222222111 01222
Q ss_pred hhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHH-hhHhh
Q 020832 133 LRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARV-SFHFV 187 (321)
Q Consensus 133 ~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A-~~Hfl 187 (321)
..+.++|++...+.+ ...+-+.++..+|.+|.+.| ++.+| ..||-
T Consensus 216 ------l~~~~kal~~~~~~~-~~~~~~~~~~~lg~~y~~~g---~~~~Ai~~~~~ 261 (293)
T 2qfc_A 216 ------LYQVNKAIEISCRIN-SMALIGQLYYQRGECLRKLE---YEEAEIEDAYK 261 (293)
T ss_dssp ------HHHHHHHHHHHHHTT-BCSSHHHHHHHHHHHHHHTT---CCHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHHcC---CcHHHHHHHHH
Confidence 778888998886544 34666889999999999999 99999 66554
No 54
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=89.57 E-value=4.6 Score=29.27 Aligned_cols=26 Identities=19% Similarity=0.187 Sum_probs=18.2
Q ss_pred CHHHHHHHHHHHHhcCCCCChHHHhhHhh
Q 020832 159 SPELHVMLAEYLYSESPELDMARVSFHFV 187 (321)
Q Consensus 159 dp~LH~~la~~~~~e~~~~~~~~A~~Hfl 187 (321)
++..+..+|.++++.+ ++.+|..+|-
T Consensus 102 ~~~~~~~la~~~~~~~---~~~~A~~~~~ 127 (136)
T 2fo7_A 102 SAEAWYNLGNAYYKQG---DYDEAIEYYQ 127 (136)
T ss_dssp CHHHHHHHHHHHHTTT---CHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHc---cHHHHHHHHH
Confidence 5667777777777777 7777766654
No 55
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=89.43 E-value=9.2 Score=32.54 Aligned_cols=48 Identities=8% Similarity=0.081 Sum_probs=35.0
Q ss_pred hHHHHHHHHHhhhc-CCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcC
Q 020832 139 SSFLKAAIKWSIEF-GAPKTGSPELHVMLAEYLYSESPELDMARVSFHFVRG 189 (321)
Q Consensus 139 ~~fl~~ai~WS~~~-g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~ 189 (321)
..+++++++...+. +......+..+..+|.+|...| ++.+|..+|-.+
T Consensus 173 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g---~~~~A~~~~~~a 221 (311)
T 3nf1_A 173 EYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQG---KFKQAETLYKEI 221 (311)
T ss_dssp HHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHT---CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcC---CHHHHHHHHHHH
Confidence 67777887765544 2122334578899999999999 999999888643
No 56
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=89.40 E-value=11 Score=33.28 Aligned_cols=144 Identities=12% Similarity=0.091 Sum_probs=81.5
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcC--CCh---HH-------------------
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFVRG--NNP---EK------------------- 194 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~--~~~---~~------------------- 194 (321)
...++++++-. -.++..+..+|.+|...| ++.+|..+|-.. .+| ..
T Consensus 118 ~~~~~~al~~~-------~~~~~~~~~l~~~~~~~g---~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (368)
T 1fch_A 118 ISALRRCLELK-------PDNQTALMALAVSFTNES---LQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRI 187 (368)
T ss_dssp HHHHHHHHHHC-------TTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSTTTGGGCC---------------CT
T ss_pred HHHHHHHHhcC-------CCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHH
Confidence 55566666432 247899999999999999 999998887521 111 10
Q ss_pred HHHHH--------HHHhh---ccCCC--hhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHhhhhccCCCCCh-hhhHHHH
Q 020832 195 FASTI--------VNFMG---KCYPG--EDDLAVARAILMYLSLGNMKDANYIMDEVKKQVENKQLQLQPSD-LIQFVFY 260 (321)
Q Consensus 195 ~a~~L--------~ew~~---~~~~~--e~dlfi~RaVL~~L~l~n~~~A~~~~~~f~~~~~~~~~~~~~~P-lLnF~~l 260 (321)
++.++ .+++. +-.|. ....+...+. .|...|+...|...+....+..+ ..| .++.+..
T Consensus 188 ~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~-~~~~~g~~~~A~~~~~~al~~~~-------~~~~~~~~l~~ 259 (368)
T 1fch_A 188 LGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGV-LFNLSGEYDKAVDCFTAALSVRP-------NDYLLWNKLGA 259 (368)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHH-HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHH
T ss_pred HHHHhhcccHHHHHHHHHHHHHhCcCcccHHHHHHHHH-HHHHcCCHHHHHHHHHHHHHhCc-------CCHHHHHHHHH
Confidence 01110 01111 22344 4455554444 45678999999998877665422 122 1221111
Q ss_pred HHHHhccCChhHHHHHHHHhHHhhhcchhHHHHHHHHHHHhcCCC
Q 020832 261 VLQTLERDALPLFNMLRANYKASIEREPAFNEMLDDIAEKFFGVK 305 (321)
Q Consensus 261 Ll~t~e~~~~~~F~~L~~~Y~~~l~rd~~~~~~L~~Ig~~yFgi~ 305 (321)
+ -...+. +..-.+.|+..++.+|........+|..|+...
T Consensus 260 ~--~~~~g~---~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g 299 (368)
T 1fch_A 260 T--LANGNQ---SEEAVAAYRRALELQPGYIRSRYNLGISCINLG 299 (368)
T ss_dssp H--HHHTTC---HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred H--HHHcCC---HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCC
Confidence 1 122232 444556666777777777777778888887553
No 57
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=89.33 E-value=14 Score=41.61 Aligned_cols=54 Identities=11% Similarity=0.124 Sum_probs=37.3
Q ss_pred HHhccCChhHHHHHHHHHH------HHHh-hhhCHHHHHHHH---------HHHHHHHHHCCCcchHHHH
Q 020832 23 KIVNEGNFYGAQQMYKSIS------ARYV-AAQRYSEALDLL---------HAGACLQLKNNQLTCGAEL 76 (321)
Q Consensus 23 ~~i~~G~~YEAhQ~~RTl~------~Ry~-~~~k~~eAi~lL---------~~ga~~ll~~~Q~~s~~DL 76 (321)
-.++-|.|-||-+.|+-.- +.+. +.++|++|+++. ++-|+.+++.|++..|.|-
T Consensus 1058 Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn~p~vWsqLAKAql~~G~~kEAIds 1127 (1630)
T 1xi4_A 1058 IAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDS 1127 (1630)
T ss_pred HHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCHHHHHHH
Confidence 3577888999988887642 2233 456778877766 6677777788887766543
No 58
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=89.26 E-value=4.7 Score=29.64 Aligned_cols=118 Identities=11% Similarity=0.069 Sum_probs=73.4
Q ss_pred CCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHHHH
Q 020832 157 TGSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYIMD 236 (321)
Q Consensus 157 ~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~ 236 (321)
..++.-+..+|..++..+ ++.+|..+|-..-. ..|...+.+..++.+ |...++...|...++
T Consensus 13 ~~~~~~~~~~~~~~~~~~---~~~~A~~~~~~al~--------------~~~~~~~~~~~la~~-~~~~~~~~~A~~~~~ 74 (133)
T 2lni_A 13 PDLALMVKNKGNECFQKG---DYPQAMKHYTEAIK--------------RNPKDAKLYSNRAAC-YTKLLEFQLALKDCE 74 (133)
T ss_dssp SCHHHHHHHHHHHHHHTT---CSHHHHHHHHHHHT--------------TCTTCHHHHHHHHHH-HTTTTCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcC---CHHHHHHHHHHHHH--------------cCCCcHHHHHHHHHH-HHHhccHHHHHHHHH
Confidence 457788899999999999 99888876643211 123344555555544 567789999988887
Q ss_pred HHHHHhhhhccCCCCChhhhHHHHHHHHhccCChhHHHHHHHHhHHhhhcchhHHHHHHHHHHHhcC
Q 020832 237 EVKKQVENKQLQLQPSDLIQFVFYVLQTLERDALPLFNMLRANYKASIEREPAFNEMLDDIAEKFFG 303 (321)
Q Consensus 237 ~f~~~~~~~~~~~~~~PlLnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l~rd~~~~~~L~~Ig~~yFg 303 (321)
...+..+. ....+.+....+. ..+ -|..-.+.|...++.+|........++..|+.
T Consensus 75 ~a~~~~~~-----~~~~~~~la~~~~---~~~---~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~ 130 (133)
T 2lni_A 75 ECIQLEPT-----FIKGYTRKAAALE---AMK---DYTKAMDVYQKALDLDSSCKEAADGYQRCMMA 130 (133)
T ss_dssp HHHHHCTT-----CHHHHHHHHHHHH---HTT---CHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHH
T ss_pred HHHHhCCC-----chHHHHHHHHHHH---HHh---hHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence 76653221 1112222222221 222 34555667777777788877888888887764
No 59
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=88.99 E-value=11 Score=33.08 Aligned_cols=80 Identities=10% Similarity=0.051 Sum_probs=52.8
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHH
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARA 218 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~Ra 218 (321)
..+++++++... ..+++..+..+|.+|.+.+ ++.+|..+|-.+- +-.|.....+...+
T Consensus 201 ~~~~~~a~~~~p-----~~~~~~~~~~l~~~~~~~g---~~~~A~~~~~~al--------------~~~~~~~~~~~~l~ 258 (368)
T 1fch_A 201 KELFLAAVRLDP-----TSIDPDVQCGLGVLFNLSG---EYDKAVDCFTAAL--------------SVRPNDYLLWNKLG 258 (368)
T ss_dssp HHHHHHHHHHST-----TSCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHH--------------HHCTTCHHHHHHHH
T ss_pred HHHHHHHHHhCc-----CcccHHHHHHHHHHHHHcC---CHHHHHHHHHHHH--------------HhCcCCHHHHHHHH
Confidence 455666665432 2348899999999999999 9999987764211 01233344444444
Q ss_pred HHHHHhcCChhHHHHHHHHHHHH
Q 020832 219 ILMYLSLGNMKDANYIMDEVKKQ 241 (321)
Q Consensus 219 VL~~L~l~n~~~A~~~~~~f~~~ 241 (321)
. .+...|+...|...++...+.
T Consensus 259 ~-~~~~~g~~~~A~~~~~~al~~ 280 (368)
T 1fch_A 259 A-TLANGNQSEEAVAAYRRALEL 280 (368)
T ss_dssp H-HHHHTTCHHHHHHHHHHHHHH
T ss_pred H-HHHHcCCHHHHHHHHHHHHHh
Confidence 3 346688889888888776654
No 60
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=88.90 E-value=2.2 Score=31.25 Aligned_cols=46 Identities=9% Similarity=0.049 Sum_probs=31.5
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhh
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFV 187 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl 187 (321)
..+++++++.....+....+.+..+..+|.++...+ ++.+|..+|-
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~---~~~~A~~~~~ 103 (131)
T 1elr_A 58 RELCEKAIEVGRENREDYRQIAKAYARIGNSYFKEE---KYKDAIHFYN 103 (131)
T ss_dssp HHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHTT---CHHHHHHHHH
T ss_pred HHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhc---cHHHHHHHHH
Confidence 556666666554332111111788999999999999 9999998775
No 61
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=88.10 E-value=8.5 Score=43.38 Aligned_cols=149 Identities=12% Similarity=0.195 Sum_probs=83.9
Q ss_pred HHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHhCCCCCCCCCC
Q 020832 36 MYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAYDNENLDRVRKIYELFPQIPVPHNL 115 (321)
Q Consensus 36 ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~~~~~~rl~~l~~~~p~~~~~r~l 115 (321)
..-.++.-|+.++.+.||+++|.++. ++......-.+|+.+++-+.-+. | +.|.++.++..+.-..+ .+
T Consensus 987 eVs~~vKaf~~aglp~EaieLLEKiv---l~~s~fs~n~~LqnlLi~tAIka----D---~~Rv~eyI~kLd~~d~~-eI 1055 (1630)
T 1xi4_A 987 EVSVTVKAFMTADLPNELIELLEKIV---LDNSVFSEHRNLQNLLILTAIKA----D---RTRVMEYINRLDNYDAP-DI 1055 (1630)
T ss_pred HhHHHHHHHHhCCCHHHHHHHHHHHH---cCCCcccccHHHHHHHHHHHHHh----C---hhhHHHHHHHhhhccHH-HH
Confidence 44566777888889999999888766 33444555667777766444333 2 23333333332211100 00
Q ss_pred CCC--chhHHHHHHHhhhhh---hhhhhhHHHHHHHHHhhhcCC-CCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcC
Q 020832 116 EDD--DDLHELTEALGAAKL---RVEGCSSFLKAAIKWSIEFGA-PKTGSPELHVMLAEYLYSESPELDMARVSFHFVRG 189 (321)
Q Consensus 116 ~~~--~~~~~~~e~~~~~~~---~~~~~~~fl~~ai~WS~~~g~-~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~ 189 (321)
+. .+....+||...=+. ..+....++.+.-.|.....- .+.-+|..|..+|..+.+.| .+.+|...|+.+
T Consensus 1056 -A~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn~p~vWsqLAKAql~~G---~~kEAIdsYiKA 1131 (1630)
T 1xi4_A 1056 -ANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKG---MVKEAIDSYIKA 1131 (1630)
T ss_pred -HHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcCCHHHHHHHHHHHHhCC---CHHHHHHHHHhc
Confidence 00 111223444322111 111123344444445442110 12457999999999999999 999999999999
Q ss_pred CChHHHHHHH
Q 020832 190 NNPEKFASTI 199 (321)
Q Consensus 190 ~~~~~~a~~L 199 (321)
+|++.+.+..
T Consensus 1132 dD~say~eVa 1141 (1630)
T 1xi4_A 1132 DDPSSYMEVV 1141 (1630)
T ss_pred CChHHHHHHH
Confidence 9998766643
No 62
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=87.91 E-value=4.8 Score=31.06 Aligned_cols=91 Identities=9% Similarity=0.007 Sum_probs=57.9
Q ss_pred HHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHhCCCCCCCCCC
Q 020832 36 MYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAYDNENLDRVRKIYELFPQIPVPHNL 115 (321)
Q Consensus 36 ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~~~~~~rl~~l~~~~p~~~~~r~l 115 (321)
.++-.-+.|.++|+|++|++...+.... .|-+......+..++.....
T Consensus 15 ~~~~~G~~~~~~g~~~~A~~~~~~al~~-------------------------~p~~~~~~~~~~~~~~~~~~------- 62 (126)
T 4gco_A 15 EEKNKGNEYFKKGDYPTAMRHYNEAVKR-------------------------DPENAILYSNRAACLTKLME------- 62 (126)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-------------------------CTTCHHHHHHHHHHHHHTTC-------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh-------------------------CCCCHHHHHHHhhHHHhhcc-------
Confidence 4566778888899999999887655321 12222333344444432210
Q ss_pred CCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhh
Q 020832 116 EDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFV 187 (321)
Q Consensus 116 ~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl 187 (321)
..++ ....++||+-. -.++..|..+|.+|...+ ++.+|..+|-
T Consensus 63 --------~~~A-----------~~~~~~al~~~-------p~~~~a~~~lg~~~~~~~---~~~~A~~~~~ 105 (126)
T 4gco_A 63 --------FQRA-----------LDDCDTCIRLD-------SKFIKGYIRKAACLVAMR---EWSKAQRAYE 105 (126)
T ss_dssp --------HHHH-----------HHHHHHHHHHC-------TTCHHHHHHHHHHHHHTT---CHHHHHHHHH
T ss_pred --------HHHH-----------HHHHHHHHHhh-------hhhhHHHHHHHHHHHHCC---CHHHHHHHHH
Confidence 1222 45556666532 237889999999999999 9999998875
No 63
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=87.52 E-value=7.5 Score=29.83 Aligned_cols=114 Identities=11% Similarity=0.172 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHHHHHHHH
Q 020832 161 ELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYIMDEVKK 240 (321)
Q Consensus 161 ~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f~~ 240 (321)
.-|+-+|..+++.| +|.+|..||-.+ + +-.|.....+.-++.. |+.+++...|...+...++
T Consensus 9 ~a~~~lG~~~~~~~---~~~~A~~~y~~A---------l-----~~~p~~~~~~~nlg~~-~~~~~~~~~A~~~~~~al~ 70 (127)
T 4gcn_A 9 IAEKDLGNAAYKQK---DFEKAHVHYDKA---------I-----ELDPSNITFYNNKAAV-YFEEKKFAECVQFCEKAVE 70 (127)
T ss_dssp HHHHHHHHHHHHTT---CHHHHHHHHHHH---------H-----HHCTTCHHHHHHHHHH-HHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC---CHHHHHHHHHHH---------H-----HhCCCCHHHHHhHHHH-HHHhhhHHHHHHHHHHHHH
Confidence 34677999999999 999999888421 1 1145666777777764 6789999999998888776
Q ss_pred HhhhhccCCCCChhhhHHHHHHHHhccCChhHHHHHHHHhHHhhh--cchhHHHHHHH
Q 020832 241 QVENKQLQLQPSDLIQFVFYVLQTLERDALPLFNMLRANYKASIE--REPAFNEMLDD 296 (321)
Q Consensus 241 ~~~~~~~~~~~~PlLnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l~--rd~~~~~~L~~ 296 (321)
.-+... ...+.+=-++.-+-.|. ....-|..-.+.|+..|. +||....-|..
T Consensus 71 ~~~~~~---~~~~~~a~~~~~lg~~~-~~~~~~~~A~~~~~kal~~~~~~~~~~~l~~ 124 (127)
T 4gcn_A 71 VGRETR---ADYKLIAKAMSRAGNAF-QKQNDLSLAVQWFHRSLSEFRDPELVKKVKE 124 (127)
T ss_dssp HHHHTT---CCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHSCCHHHHHHHHH
T ss_pred hCcccc---hhhHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHhhCcCHHHHHHHHH
Confidence 544321 12222211111111111 112234555667777664 55665554444
No 64
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=87.23 E-value=10 Score=30.40 Aligned_cols=126 Identities=18% Similarity=0.150 Sum_probs=76.7
Q ss_pred hhHHHHHHHHHHhccCChhHHHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCC--CC
Q 020832 13 PAQENIDKLEKIVNEGNFYGAQQMYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGK--VA 90 (321)
Q Consensus 13 ~~~r~l~rl~~~i~~G~~YEAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~--~~ 90 (321)
.++..+.+-...+..|+|=+|...|+...... .+-.+..+.-+..+.+.|++..|.+. +++.- .|
T Consensus 5 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~------P~~~~a~~~la~~~~~~g~~~~A~~~-------~~~a~~~~p 71 (176)
T 2r5s_A 5 PDEQLLKQVSELLQQGEHAQALNVIQTLSDEL------QSRGDVKLAKADCLLETKQFELAQEL-------LATIPLEYQ 71 (176)
T ss_dssp -CTTHHHHHHHHHHTTCHHHHHHHHHTSCHHH------HTSHHHHHHHHHHHHHTTCHHHHHHH-------HTTCCGGGC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC------CCcHHHHHHHHHHHHHCCCHHHHHHH-------HHHhhhccC
Confidence 35566777778889999999998888766543 22345566667788888888776544 23221 12
Q ss_pred CChhHHHHHHHHHHhCCCCCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 020832 91 YDNENLDRVRKIYELFPQIPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVMLAEYL 170 (321)
Q Consensus 91 ~~~~~~~rl~~l~~~~p~~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~ 170 (321)
+.........+ ........ .+ -...++++++-. -++++.|..+|.++
T Consensus 72 -~~~~~~~~~~~-~~~~~~~~-------------~~-----------a~~~~~~al~~~-------P~~~~~~~~la~~~ 118 (176)
T 2r5s_A 72 -DNSYKSLIAKL-ELHQQAAE-------------SP-----------ELKRLEQELAAN-------PDNFELACELAVQY 118 (176)
T ss_dssp -CHHHHHHHHHH-HHHHHHTS-------------CH-----------HHHHHHHHHHHS-------TTCHHHHHHHHHHH
T ss_pred -ChHHHHHHHHH-HHHhhccc-------------ch-----------HHHHHHHHHHhC-------CCCHHHHHHHHHHH
Confidence 33222111111 10000000 00 045566666532 24899999999999
Q ss_pred HhcCCCCChHHHhhHhh
Q 020832 171 YSESPELDMARVSFHFV 187 (321)
Q Consensus 171 ~~e~~~~~~~~A~~Hfl 187 (321)
...| ++.+|..+|-
T Consensus 119 ~~~g---~~~~A~~~~~ 132 (176)
T 2r5s_A 119 NQVG---RDEEALELLW 132 (176)
T ss_dssp HHTT---CHHHHHHHHH
T ss_pred HHcc---cHHHHHHHHH
Confidence 9999 9999998875
No 65
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=86.82 E-value=9.2 Score=29.50 Aligned_cols=118 Identities=11% Similarity=0.047 Sum_probs=67.0
Q ss_pred CCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHHHH
Q 020832 157 TGSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYIMD 236 (321)
Q Consensus 157 ~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~ 236 (321)
-.++..+..+|.+++..+ ++.+|..++-..- . ..|.....+...+. .+...++...|...+.
T Consensus 39 ~~~~~~~~~~~~~~~~~~---~~~~A~~~~~~~~-------------~-~~~~~~~~~~~~a~-~~~~~~~~~~A~~~~~ 100 (186)
T 3as5_A 39 AFDVDVALHLGIAYVKTG---AVDRGTELLERSL-------------A-DAPDNVKVATVLGL-TYVQVQKYDLAVPLLI 100 (186)
T ss_dssp SCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHH-------------H-HCTTCHHHHHHHHH-HHHHHTCHHHHHHHHH
T ss_pred ccChHHHHHHHHHHHHcC---CHHHHHHHHHHHH-------------h-cCCCCHHHHHHHHH-HHHHhcCHHHHHHHHH
Confidence 357899999999999999 9998886653211 0 12333444444433 3566788888888777
Q ss_pred HHHHHhhhhccCCCCChh--hhHHHHHHHHhccCChhHHHHHHHHhHHhhhcchhHHHHHHHHHHHhcCCC
Q 020832 237 EVKKQVENKQLQLQPSDL--IQFVFYVLQTLERDALPLFNMLRANYKASIEREPAFNEMLDDIAEKFFGVK 305 (321)
Q Consensus 237 ~f~~~~~~~~~~~~~~Pl--LnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l~rd~~~~~~L~~Ig~~yFgi~ 305 (321)
...+..+ ..+. .+.... -...++ +..-.+.|...++.+|........+|..|+...
T Consensus 101 ~~~~~~~-------~~~~~~~~~a~~---~~~~~~---~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~ 158 (186)
T 3as5_A 101 KVAEANP-------INFNVRFRLGVA---LDNLGR---FDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMG 158 (186)
T ss_dssp HHHHHCT-------TCHHHHHHHHHH---HHHTTC---HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHhcCc-------HhHHHHHHHHHH---HHHcCc---HHHHHHHHHHHHhcCccchHHHHHHHHHHHHcC
Confidence 6665322 1121 111111 122232 333444555555555665666677777776554
No 66
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=86.73 E-value=1.8 Score=34.51 Aligned_cols=67 Identities=10% Similarity=0.023 Sum_probs=47.1
Q ss_pred CCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHHHH
Q 020832 157 TGSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYIMD 236 (321)
Q Consensus 157 ~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~ 236 (321)
..+++.+..+|..+++.+ ++.+|..+|-..- +-.|.....+..++.. |+..++...|...++
T Consensus 8 ~~~a~~~~~~g~~~~~~g---~~~~A~~~~~~al--------------~~~p~~~~~~~~l~~~-~~~~g~~~~A~~~~~ 69 (164)
T 3sz7_A 8 TPESDKLKSEGNAAMARK---EYSKAIDLYTQAL--------------SIAPANPIYLSNRAAA-YSASGQHEKAAEDAE 69 (164)
T ss_dssp CHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHH--------------HHSTTCHHHHHHHHHH-HHHTTCHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHcC---CHHHHHHHHHHHH--------------HhCCcCHHHHHHHHHH-HHHccCHHHHHHHHH
Confidence 346788999999999999 9999987764211 1124445555555554 567889998888887
Q ss_pred HHHHH
Q 020832 237 EVKKQ 241 (321)
Q Consensus 237 ~f~~~ 241 (321)
..++.
T Consensus 70 ~al~~ 74 (164)
T 3sz7_A 70 LATVV 74 (164)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 76654
No 67
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=85.92 E-value=15 Score=31.14 Aligned_cols=69 Identities=17% Similarity=0.152 Sum_probs=49.0
Q ss_pred hhHHHHHHHHHHhccCChhHHHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHH
Q 020832 13 PAQENIDKLEKIVNEGNFYGAQQMYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEAL 84 (321)
Q Consensus 13 ~~~r~l~rl~~~i~~G~~YEAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~ 84 (321)
..+....+-...+..|+|=+|.+.++.+...+... ..+.+.++.-+..+.+.|++..|.+....+++.+
T Consensus 14 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~---~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~ 82 (261)
T 3qky_A 14 SPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTH---EWAADAQFYLARAYYQNKEYLLAASEYERFIQIY 82 (261)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCS---TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC---cchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHC
Confidence 45666677778889999999999998887765432 2234556666777778888877777766665554
No 68
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=85.83 E-value=14 Score=30.64 Aligned_cols=65 Identities=9% Similarity=-0.010 Sum_probs=34.4
Q ss_pred CCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHHHHH
Q 020832 158 GSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYIMDE 237 (321)
Q Consensus 158 Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~ 237 (321)
+++..+..+|.++...+ ++.+|..+|-.. . . ..|.....+... ...|...++...|...+..
T Consensus 139 ~~~~~~~~la~~~~~~g---~~~~A~~~~~~~----------~---~-~~~~~~~~~~~l-a~~~~~~g~~~~A~~~~~~ 200 (252)
T 2ho1_A 139 ERSRVFENLGLVSLQMK---KPAQAKEYFEKS----------L---R-LNRNQPSVALEM-ADLLYKEREYVPARQYYDL 200 (252)
T ss_dssp THHHHHHHHHHHHHHTT---CHHHHHHHHHHH----------H---H-HCSCCHHHHHHH-HHHHHHTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcC---CHHHHHHHHHHH----------H---h-cCcccHHHHHHH-HHHHHHcCCHHHHHHHHHH
Confidence 35566666666666666 666666544311 0 1 123333333332 3345566777777777666
Q ss_pred HHH
Q 020832 238 VKK 240 (321)
Q Consensus 238 f~~ 240 (321)
..+
T Consensus 201 ~~~ 203 (252)
T 2ho1_A 201 FAQ 203 (252)
T ss_dssp HHT
T ss_pred HHH
Confidence 543
No 69
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=85.14 E-value=22 Score=32.30 Aligned_cols=138 Identities=13% Similarity=0.085 Sum_probs=77.7
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcC-----CChHHH---------------HHH
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFVRG-----NNPEKF---------------AST 198 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~-----~~~~~~---------------a~~ 198 (321)
...++++++-. -.++..+..+|.+|...+ ++.+|..+|-.. +++... +..
T Consensus 197 ~~~~~~~~~~~-------~~~~~~~~~l~~~~~~~g---~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 266 (450)
T 2y4t_A 197 ISDLKAASKLK-------NDNTEAFYKISTLYYQLG---DHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEE 266 (450)
T ss_dssp HHHHHHHHHHH-------CSCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC-------CCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566666543 247899999999999999 999999888632 222211 222
Q ss_pred HHH---------Hhh---ccCCChhH----HHHHHHHHHHHhcCChhHHHHHHHHHHHHhhhhccCCCCChhhhHHHHHH
Q 020832 199 IVN---------FMG---KCYPGEDD----LAVARAILMYLSLGNMKDANYIMDEVKKQVENKQLQLQPSDLIQFVFYVL 262 (321)
Q Consensus 199 L~e---------w~~---~~~~~e~d----lfi~RaVL~~L~l~n~~~A~~~~~~f~~~~~~~~~~~~~~PlLnF~~lLl 262 (321)
+.. ++. +..|...+ .+..+ +..+...|+...|...++...+..| ..+.. ...+.
T Consensus 267 ~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~l-~~~~~~~g~~~~A~~~~~~a~~~~p-------~~~~~--~~~l~ 336 (450)
T 2y4t_A 267 LIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERI-CHCFSKDEKPVEAIRVCSEVLQMEP-------DNVNA--LKDRA 336 (450)
T ss_dssp HHHHTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHH-HHHHHTTTCHHHHHHHHHHHHHHCT-------TCHHH--HHHHH
T ss_pred HHHcCCHHHHHHHHHHHHhcCCcchHHHHHHHHHH-HHHHHHCCCHHHHHHHHHHHHHhCc-------ccHHH--HHHHH
Confidence 211 111 12233322 23333 3345668999999998877665322 22211 11222
Q ss_pred HHh-ccCChhHHHHHHHHhHHhhhcchhHHHHHHHHHH
Q 020832 263 QTL-ERDALPLFNMLRANYKASIEREPAFNEMLDDIAE 299 (321)
Q Consensus 263 ~t~-e~~~~~~F~~L~~~Y~~~l~rd~~~~~~L~~Ig~ 299 (321)
.++ ..+ -|..-.+.|+..++.+|........++.
T Consensus 337 ~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~l~~ 371 (450)
T 2y4t_A 337 EAYLIEE---MYDEAIQDYETAQEHNENDQQIREGLEK 371 (450)
T ss_dssp HHHHHTT---CHHHHHHHHHHHHTTSSSCHHHHHHHHH
T ss_pred HHHHHhc---CHHHHHHHHHHHHHhCcchHHHHHHHHH
Confidence 222 223 3445667777777777777766666663
No 70
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=85.10 E-value=6.8 Score=31.99 Aligned_cols=110 Identities=8% Similarity=-0.020 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHhCCCCCCC
Q 020832 33 AQQMYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAYDNENLDRVRKIYELFPQIPVP 112 (321)
Q Consensus 33 AhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~~~~~~rl~~l~~~~p~~~~~ 112 (321)
.-+.++.+...+..+++|++|++.+.+.....-+...+..+. + ......+.......+..++....
T Consensus 37 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~la~~~~~~~----- 102 (198)
T 2fbn_A 37 SAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQI-L--------LDKKKNIEISCNLNLATCYNKNK----- 102 (198)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHH-H--------HHHHHHHHHHHHHHHHHHHHHTT-----
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhh-H--------HHHHHHHHHHHHHHHHHHHHHhc-----
Confidence 445667778888888999999988776654333333332220 0 00000000112223333332211
Q ss_pred CCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhh
Q 020832 113 HNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFV 187 (321)
Q Consensus 113 r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl 187 (321)
+ ..|+ ....++|++-. -.++..+..+|.+|...+ ++.+|..+|-
T Consensus 103 ~----------~~~A-----------~~~~~~al~~~-------p~~~~~~~~lg~~~~~~~---~~~~A~~~~~ 146 (198)
T 2fbn_A 103 D----------YPKA-----------IDHASKVLKID-------KNNVKALYKLGVANMYFG---FLEEAKENLY 146 (198)
T ss_dssp C----------HHHH-----------HHHHHHHHHHS-------TTCHHHHHHHHHHHHHHT---CHHHHHHHHH
T ss_pred C----------HHHH-----------HHHHHHHHHhC-------cccHHHHHHHHHHHHHcc---cHHHHHHHHH
Confidence 0 1222 55666666542 247889999999999999 9999988775
No 71
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=84.91 E-value=6.1 Score=36.10 Aligned_cols=132 Identities=14% Similarity=0.034 Sum_probs=76.4
Q ss_pred cCChhHHHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCCC-hhHHHHHHHHHHh
Q 020832 27 EGNFYGAQQMYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAYD-NENLDRVRKIYEL 105 (321)
Q Consensus 27 ~G~~YEAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~-~~~~~rl~~l~~~ 105 (321)
.|++=+|.+.++.........++.-.-..+...=|..+.+.|++..|.++..-++........... .+....+..++..
T Consensus 108 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (434)
T 4b4t_Q 108 PDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHK 187 (434)
T ss_dssp CSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHH
Confidence 355556666666665555444433333345555566777778877777776666555544432211 2333444455443
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhH
Q 020832 106 FPQIPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFH 185 (321)
Q Consensus 106 ~p~~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~H 185 (321)
... . .+ ...+.++|++...+.+.++..--.+....|.++..++ +|..|..|
T Consensus 188 ~~~------------~---~~-----------A~~~~~~al~~~~~~~~~~~~~~~~~~~~g~~~~~~~---~y~~A~~~ 238 (434)
T 4b4t_Q 188 LRN------------L---AK-----------SKASLTAARTAANSIYCPTQTVAELDLMSGILHCEDK---DYKTAFSY 238 (434)
T ss_dssp TTC------------H---HH-----------HHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSSS---CHHHHHHH
T ss_pred hCc------------H---HH-----------HHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHH---hHHHHHHH
Confidence 220 0 11 1677888888776554321222256777888999999 99999988
Q ss_pred hh
Q 020832 186 FV 187 (321)
Q Consensus 186 fl 187 (321)
|.
T Consensus 239 ~~ 240 (434)
T 4b4t_Q 239 FF 240 (434)
T ss_dssp HH
T ss_pred HH
Confidence 86
No 72
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=84.87 E-value=16 Score=30.53 Aligned_cols=66 Identities=15% Similarity=0.150 Sum_probs=39.7
Q ss_pred HHHHHHHHHhccCChhHHHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHH
Q 020832 16 ENIDKLEKIVNEGNFYGAQQMYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEAL 84 (321)
Q Consensus 16 r~l~rl~~~i~~G~~YEAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~ 84 (321)
....+-...++.|+|=+|.+.+..+..++..... +.+.++.-+..+.+.|++..|.+....+++.+
T Consensus 6 ~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~---~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~ 71 (225)
T 2yhc_A 6 EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPY---SQQVQLDLIYAYYKNADLPLAQAAIDRFIRLN 71 (225)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTT---HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChH---HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHC
Confidence 3445556678889999999988888876543221 22334444455556666666655554444433
No 73
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=84.23 E-value=11 Score=33.82 Aligned_cols=44 Identities=9% Similarity=0.109 Sum_probs=32.0
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhh
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFV 187 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl 187 (321)
..++.+++......+.. .....+..+|.+++..| ++.+|..++-
T Consensus 155 ~~~~~~al~~~~~~~~~--~~~~~~~~la~~~~~~g---~~~~A~~~l~ 198 (373)
T 1hz4_A 155 EASARSGIEVLSSYQPQ--QQLQCLAMLIQCSLARG---DLDNARSQLN 198 (373)
T ss_dssp HHHHHHHHHHTTTSCGG--GGHHHHHHHHHHHHHHT---CHHHHHHHHH
T ss_pred HHHHHHHHHHhhccCcH--HHHHHHHHHHHHHHHcC---CHHHHHHHHH
Confidence 66777888776544321 13356788999999999 9999988874
No 74
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=84.04 E-value=26 Score=32.49 Aligned_cols=95 Identities=15% Similarity=0.174 Sum_probs=63.7
Q ss_pred HHHHHHHhhhc-CCCC-CCCHHHHHHHHHHHHhcCCCCChHHHhhHhh--cCCC-------hHHHHHHHHHHhh--cc--
Q 020832 142 LKAAIKWSIEF-GAPK-TGSPELHVMLAEYLYSESPELDMARVSFHFV--RGNN-------PEKFASTIVNFMG--KC-- 206 (321)
Q Consensus 142 l~~ai~WS~~~-g~~~-~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl--~~~~-------~~~~a~~L~ew~~--~~-- 206 (321)
...|++|..+. +..+ .|+.++..+.+.++.+.+ +..+|+..|- ...+ .+.+..+.--|.. .|
T Consensus 116 ~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~---r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~ 192 (310)
T 3mv2_B 116 LDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNN---NVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNKE 192 (310)
T ss_dssp HHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCC---CHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhCCc
Confidence 46778887765 3222 589999999999999999 9999999993 2223 2455555555643 11
Q ss_pred ---------------CCC--hhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHhh
Q 020832 207 ---------------YPG--EDDLAVARAILMYLSLGNMKDANYIMDEVKKQVE 243 (321)
Q Consensus 207 ---------------~~~--e~dlfi~RaVL~~L~l~n~~~A~~~~~~f~~~~~ 243 (321)
+|. ...+.+. .++.+|++..|...++...+..|
T Consensus 193 ~~q~A~~~f~El~~~~p~~~~~~lLln----~~~~~g~~~eAe~~L~~l~~~~p 242 (310)
T 3mv2_B 193 TATSNFYYYEELSQTFPTWKTQLGLLN----LHLQQRNIAEAQGIVELLLSDYY 242 (310)
T ss_dssp TTTHHHHHHHHHHTTSCSHHHHHHHHH----HHHHHTCHHHHHHHHHHHHSHHH
T ss_pred cHHHHHHHHHHHHHhCCCcccHHHHHH----HHHHcCCHHHHHHHHHHHHHhcc
Confidence 121 1223333 57788999999999986665544
No 75
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=83.00 E-value=19 Score=29.83 Aligned_cols=133 Identities=8% Similarity=0.017 Sum_probs=74.1
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHH
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARA 218 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~Ra 218 (321)
...+.++++.. -.++..+..+|.+|...+ ++.+|..+|-..-.. ...|.....+...+
T Consensus 91 ~~~~~~a~~~~-------~~~~~~~~~la~~~~~~g---~~~~A~~~~~~~~~~------------~~~~~~~~~~~~la 148 (252)
T 2ho1_A 91 DEEYRKALASD-------SRNARVLNNYGGFLYEQK---RYEEAYQRLLEASQD------------TLYPERSRVFENLG 148 (252)
T ss_dssp HHHHHHHHHHC-------TTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHTTC------------TTCTTHHHHHHHHH
T ss_pred HHHHHHHHHHC-------cCcHHHHHHHHHHHHHHh---HHHHHHHHHHHHHhC------------ccCcccHHHHHHHH
Confidence 55566666542 236889999999999999 999999998764330 01122333333333
Q ss_pred HHHHHhcCChhHHHHHHHHHHHHhhhhccCCCCChhhhHHHHHHHHhccCChhHHHHHHHHhHHhhhcchhHHHHHHHHH
Q 020832 219 ILMYLSLGNMKDANYIMDEVKKQVENKQLQLQPSDLIQFVFYVLQTLERDALPLFNMLRANYKASIEREPAFNEMLDDIA 298 (321)
Q Consensus 219 VL~~L~l~n~~~A~~~~~~f~~~~~~~~~~~~~~PlLnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l~rd~~~~~~L~~Ig 298 (321)
..|...++...|...+....+..+ ..+... ..+...-+..++. ..-.+.|+..++.+|.....+..++
T Consensus 149 -~~~~~~g~~~~A~~~~~~~~~~~~-------~~~~~~-~~la~~~~~~g~~---~~A~~~~~~~~~~~~~~~~~~~~~~ 216 (252)
T 2ho1_A 149 -LVSLQMKKPAQAKEYFEKSLRLNR-------NQPSVA-LEMADLLYKEREY---VPARQYYDLFAQGGGQNARSLLLGI 216 (252)
T ss_dssp -HHHHHTTCHHHHHHHHHHHHHHCS-------CCHHHH-HHHHHHHHHTTCH---HHHHHHHHHHHTTSCCCHHHHHHHH
T ss_pred -HHHHHcCCHHHHHHHHHHHHhcCc-------ccHHHH-HHHHHHHHHcCCH---HHHHHHHHHHHHhCcCcHHHHHHHH
Confidence 345667888888888777665321 112111 1111122223332 2233445555555555556666666
Q ss_pred HHhcCCC
Q 020832 299 EKFFGVK 305 (321)
Q Consensus 299 ~~yFgi~ 305 (321)
..|+...
T Consensus 217 ~~~~~~g 223 (252)
T 2ho1_A 217 RLAKVFE 223 (252)
T ss_dssp HHHHHTT
T ss_pred HHHHHcc
Confidence 6666443
No 76
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=82.82 E-value=17 Score=29.13 Aligned_cols=162 Identities=7% Similarity=-0.089 Sum_probs=95.6
Q ss_pred HHHHhccCChhHHHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCCChhHHHHHH
Q 020832 21 LEKIVNEGNFYGAQQMYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAYDNENLDRVR 100 (321)
Q Consensus 21 l~~~i~~G~~YEAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~~~~~~rl~ 100 (321)
-......|+|=+|.+.++......... .+..+.-+..+...|++..|.+.....++.. |-+......+.
T Consensus 15 ~~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-----~~~~~~~~~l~ 83 (225)
T 2vq2_A 15 AMEYMRGQDYRQATASIEDALKSDPKN------ELAWLVRAEIYQYLKVNDKAQESFRQALSIK-----PDSAEINNNYG 83 (225)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTCHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHHhCccc------hHHHHHHHHHHHHcCChHHHHHHHHHHHHhC-----CCChHHHHHHH
Confidence 345566777888877777666543221 3345555666777777777766655554431 22333444555
Q ss_pred HHHHhCCCCCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChH
Q 020832 101 KIYELFPQIPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMA 180 (321)
Q Consensus 101 ~l~~~~p~~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~ 180 (321)
.++...+ .. .+++ ..+++++++ .+ ...+++..+..+|.++...+ ++.
T Consensus 84 ~~~~~~~-~~-------------~~~A-----------~~~~~~~~~----~~-~~~~~~~~~~~l~~~~~~~~---~~~ 130 (225)
T 2vq2_A 84 WFLCGRL-NR-------------PAES-----------MAYFDKALA----DP-TYPTPYIANLNKGICSAKQG---QFG 130 (225)
T ss_dssp HHHHTTT-CC-------------HHHH-----------HHHHHHHHT----ST-TCSCHHHHHHHHHHHHHHTT---CHH
T ss_pred HHHHHhc-Cc-------------HHHH-----------HHHHHHHHc----Cc-CCcchHHHHHHHHHHHHHcC---CHH
Confidence 5544220 00 1222 566677776 11 12356899999999999999 999
Q ss_pred HHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHHHHHHHHH
Q 020832 181 RVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYIMDEVKKQ 241 (321)
Q Consensus 181 ~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f~~~ 241 (321)
+|..+|-.+ .+ ..|...+.+... ...+...++...|...++...+.
T Consensus 131 ~A~~~~~~~----------~~----~~~~~~~~~~~l-a~~~~~~~~~~~A~~~~~~~~~~ 176 (225)
T 2vq2_A 131 LAEAYLKRS----------LA----AQPQFPPAFKEL-ARTKMLAGQLGDADYYFKKYQSR 176 (225)
T ss_dssp HHHHHHHHH----------HH----HSTTCHHHHHHH-HHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH----------HH----hCCCCchHHHHH-HHHHHHcCCHHHHHHHHHHHHHh
Confidence 998776422 11 122333333333 33466789999999988877664
No 77
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=82.52 E-value=17 Score=29.05 Aligned_cols=79 Identities=14% Similarity=0.124 Sum_probs=50.4
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHH
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARA 218 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~Ra 218 (321)
..+++++++.. -.++..+..+|.++++.+ ++.+|..+|-.. ....+...... ....
T Consensus 133 ~~~~~~~~~~~-------~~~~~~~~~la~~~~~~~---~~~~A~~~~~~~-------------~~~~~~~~~~~-~~~~ 188 (225)
T 2vq2_A 133 EAYLKRSLAAQ-------PQFPPAFKELARTKMLAG---QLGDADYYFKKY-------------QSRVEVLQADD-LLLG 188 (225)
T ss_dssp HHHHHHHHHHS-------TTCHHHHHHHHHHHHHHT---CHHHHHHHHHHH-------------HHHHCSCCHHH-HHHH
T ss_pred HHHHHHHHHhC-------CCCchHHHHHHHHHHHcC---CHHHHHHHHHHH-------------HHhCCCCCHHH-HHHH
Confidence 45566666543 246889999999999999 999988665421 11121022222 2445
Q ss_pred HHHHHhcCChhHHHHHHHHHHHH
Q 020832 219 ILMYLSLGNMKDANYIMDEVKKQ 241 (321)
Q Consensus 219 VL~~L~l~n~~~A~~~~~~f~~~ 241 (321)
...+...++...|...+....+.
T Consensus 189 ~~~~~~~~~~~~a~~~~~~~~~~ 211 (225)
T 2vq2_A 189 WKIAKALGNAQAAYEYEAQLQAN 211 (225)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCcHHHHHHHHHHHHHh
Confidence 55566788888888877776553
No 78
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=82.13 E-value=31 Score=33.80 Aligned_cols=138 Identities=14% Similarity=0.093 Sum_probs=93.5
Q ss_pred HHHHHHhccCChhHHHHHHHHHHHHHhh--hhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCC---CCCCh
Q 020832 19 DKLEKIVNEGNFYGAQQMYKSISARYVA--AQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGK---VAYDN 93 (321)
Q Consensus 19 ~rl~~~i~~G~~YEAhQ~~RTl~~Ry~~--~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~---~~~~~ 93 (321)
++.+..-..|+|=||..+|+-......+ ...+.+-...+..-+..+...|++..|..+....++++++.- .|-..
T Consensus 314 e~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a 393 (490)
T 3n71_A 314 EKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLG 393 (490)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 3444455789999999998766555433 236777888888888899999999999999999998887652 22223
Q ss_pred hHHHHHHHHHHhCCCCCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhh-cCCCCCCCHH---HHHHHHHH
Q 020832 94 ENLDRVRKIYELFPQIPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIE-FGAPKTGSPE---LHVMLAEY 169 (321)
Q Consensus 94 ~~~~rl~~l~~~~p~~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~-~g~~~~Gdp~---LH~~la~~ 169 (321)
.++.+|..++..-. + ..|| ..+..+|+.--.. .|. .||. +..+++..
T Consensus 394 ~~l~nLa~~~~~~G-----~----------~~eA-----------~~~~~~Al~i~~~~lG~---~Hp~~~~~~~~l~~~ 444 (490)
T 3n71_A 394 MAVMRAGLTNWHAG-----H----------IEVG-----------HGMICKAYAILLVTHGP---SHPITKDLEAMRMQT 444 (490)
T ss_dssp HHHHHHHHHHHHTT-----C----------HHHH-----------HHHHHHHHHHHHHHTCT---TSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCC-----C----------HHHH-----------HHHHHHHHHHHHHHhCC---CChHHHHHHHHHHHH
Confidence 56677777776422 1 2333 6677777765444 363 4774 44577777
Q ss_pred HHhcCCCCChHHHhhHhhc
Q 020832 170 LYSESPELDMARVSFHFVR 188 (321)
Q Consensus 170 ~~~e~~~~~~~~A~~Hfl~ 188 (321)
+.+-+ .|..|+..+-.
T Consensus 445 ~~e~~---~~~~ae~~~~~ 460 (490)
T 3n71_A 445 EMELR---MFRQNEFMYHK 460 (490)
T ss_dssp HHHHH---HHHHHHHHHHH
T ss_pred HHHHH---HHHHHHHHHHH
Confidence 77666 67777766644
No 79
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=81.94 E-value=12 Score=29.34 Aligned_cols=39 Identities=8% Similarity=-0.094 Sum_probs=30.0
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhh
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFV 187 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl 187 (321)
...+++|++-.. .++..|..+|.+|...+ ++.+|..+|-
T Consensus 65 ~~~~~~al~~~p-------~~~~~~~~lg~~~~~~g---~~~~A~~~~~ 103 (164)
T 3sz7_A 65 AEDAELATVVDP-------KYSKAWSRLGLARFDMA---DYKGAKEAYE 103 (164)
T ss_dssp HHHHHHHHHHCT-------TCHHHHHHHHHHHHHTT---CHHHHHHHHH
T ss_pred HHHHHHHHHhCC-------CCHHHHHHHHHHHHHcc---CHHHHHHHHH
Confidence 555666665432 36899999999999999 9999987664
No 80
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=81.48 E-value=27 Score=33.23 Aligned_cols=140 Identities=6% Similarity=-0.065 Sum_probs=82.7
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCh-HHHhhHhhc-----CCChH---HHHHHHHH---------Hhh---ccCCChhHHHH
Q 020832 157 TGSPELHVMLAEYLYSESPELDM-ARVSFHFVR-----GNNPE---KFASTIVN---------FMG---KCYPGEDDLAV 215 (321)
Q Consensus 157 ~Gdp~LH~~la~~~~~e~~~~~~-~~A~~Hfl~-----~~~~~---~~a~~L~e---------w~~---~~~~~e~dlfi 215 (321)
-.+++.+..+|..|+..+ ++ .+|..+|-. .+++. .++..++. ++. +-.|. ...+.
T Consensus 99 ~~~a~~~~~lg~~~~~~g---~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~ 174 (474)
T 4abn_A 99 QVEAQALMLKGKALNVTP---DYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQ 174 (474)
T ss_dssp CCCHHHHHHHHHHHTSSS---SCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHH
T ss_pred chhHHHHHHHHHHHHhcc---ccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHH
Confidence 478999999999999999 99 999988853 22233 22222221 111 11233 23333
Q ss_pred HHHHHHHHhc---------CChhHHHHHHHHHHHHhhhhccCCCCChhhhHHHHHHHHh--ccCChhHHHHHHHHhHHhh
Q 020832 216 ARAILMYLSL---------GNMKDANYIMDEVKKQVENKQLQLQPSDLIQFVFYVLQTL--ERDALPLFNMLRANYKASI 284 (321)
Q Consensus 216 ~RaVL~~L~l---------~n~~~A~~~~~~f~~~~~~~~~~~~~~PlLnF~~lLl~t~--e~~~~~~F~~L~~~Y~~~l 284 (321)
..+. .|... ++...|...+..-.+..+.. ...+.|....+...+ ...+..-|..-.+.|+..+
T Consensus 175 ~lg~-~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al 248 (474)
T 4abn_A 175 NLSM-VLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLD-----GRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAE 248 (474)
T ss_dssp HHHH-HHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHH-HHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Confidence 3332 33445 77777877776665532211 112233333333221 1113356777788899989
Q ss_pred hcch---hHHHHHHHHHHHhcCCCC
Q 020832 285 EREP---AFNEMLDDIAEKFFGVKR 306 (321)
Q Consensus 285 ~rd~---~~~~~L~~Ig~~yFgi~~ 306 (321)
+.+| ........+|..|+....
T Consensus 249 ~~~p~~~~~~~~~~~lg~~~~~~g~ 273 (474)
T 4abn_A 249 KVDRKASSNPDLHLNRATLHKYEES 273 (474)
T ss_dssp HHCGGGGGCHHHHHHHHHHHHHTTC
T ss_pred HhCCCcccCHHHHHHHHHHHHHcCC
Confidence 8888 888899999999987643
No 81
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=81.44 E-value=10 Score=27.31 Aligned_cols=115 Identities=12% Similarity=0.025 Sum_probs=70.8
Q ss_pred CHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHHHHHH
Q 020832 159 SPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYIMDEV 238 (321)
Q Consensus 159 dp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f 238 (321)
++..+..+|..++..+ ++.+|..+|-.+- . ..|.....+...+.+ +...++...|...+...
T Consensus 11 ~~~~~~~~~~~~~~~~---~~~~A~~~~~~~~-------------~-~~~~~~~~~~~~a~~-~~~~~~~~~A~~~~~~~ 72 (131)
T 2vyi_A 11 EAERLKTEGNEQMKVE---NFEAAVHFYGKAI-------------E-LNPANAVYFCNRAAA-YSKLGNYAGAVQDCERA 72 (131)
T ss_dssp HHHHHHHHHHHHHHTT---CHHHHHHHHHHHH-------------H-HCTTCHHHHHHHHHH-HHHTTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHcc---CHHHHHHHHHHHH-------------H-cCCCCHHHHHHHHHH-HHHhhchHHHHHHHHHH
Confidence 5678889999999999 9998887653211 1 123444455555544 46689999999888776
Q ss_pred HHHhhhhccCCCCChh--hhHHHHHHHHhccCChhHHHHHHHHhHHhhhcchhHHHHHHHHHHHhcCC
Q 020832 239 KKQVENKQLQLQPSDL--IQFVFYVLQTLERDALPLFNMLRANYKASIEREPAFNEMLDDIAEKFFGV 304 (321)
Q Consensus 239 ~~~~~~~~~~~~~~Pl--LnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l~rd~~~~~~L~~Ig~~yFgi 304 (321)
.+..+ ..|. .+.... -...+ -|..-...|+..++.+|........+|..|..+
T Consensus 73 ~~~~~-------~~~~~~~~~~~~---~~~~~---~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~ 127 (131)
T 2vyi_A 73 ICIDP-------AYSKAYGRMGLA---LSSLN---KHVEAVAYYKKALELDPDNETYKSNLKIAELKL 127 (131)
T ss_dssp HHHCT-------TCHHHHHHHHHH---HHHTT---CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred HhcCc-------cCHHHHHHHHHH---HHHhC---CHHHHHHHHHHHHhcCccchHHHHHHHHHHHHH
Confidence 65422 1221 222111 11222 344556677777777777777778888877644
No 82
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=81.25 E-value=16 Score=27.86 Aligned_cols=101 Identities=12% Similarity=0.027 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHhCCCCCCC
Q 020832 33 AQQMYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAYDNENLDRVRKIYELFPQIPVP 112 (321)
Q Consensus 33 AhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~~~~~~rl~~l~~~~p~~~~~ 112 (321)
+-..++-+-+-+.++|+|++|++...+.... .|-+......+..++....
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~-------------------------~p~~~~~~~nlg~~~~~~~----- 56 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIEL-------------------------DPSNITFYNNKAAVYFEEK----- 56 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------------------------CTTCHHHHHHHHHHHHHTT-----
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------------------------CCCCHHHHHhHHHHHHHhh-----
Confidence 3445667778888899999999887654321 1112223334444443221
Q ss_pred CCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhh
Q 020832 113 HNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFV 187 (321)
Q Consensus 113 r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl 187 (321)
+ .+|+ ....++||+-..+.......-...|..+|.++...+ ++.+|..+|-
T Consensus 57 ~----------~~~A-----------~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~~~~~~---~~~~A~~~~~ 107 (127)
T 4gcn_A 57 K----------FAEC-----------VQFCEKAVEVGRETRADYKLIAKAMSRAGNAFQKQN---DLSLAVQWFH 107 (127)
T ss_dssp C----------HHHH-----------HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT---CHHHHHHHHH
T ss_pred h----------HHHH-----------HHHHHHHHHhCcccchhhHHHHHHHHHHHHHHHHcC---CHHHHHHHHH
Confidence 0 1222 455566665544332110111246788999999999 9999988774
No 83
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=81.01 E-value=13 Score=26.54 Aligned_cols=116 Identities=12% Similarity=0.137 Sum_probs=67.8
Q ss_pred CCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHHHHH
Q 020832 158 GSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYIMDE 237 (321)
Q Consensus 158 Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~ 237 (321)
+.+..+..+|..+...+ ++.+|..+|-.. + .. .|...+.+...+. .+...++...|...+..
T Consensus 7 ~~~~~~~~~~~~~~~~~---~~~~A~~~~~~~---------~----~~-~~~~~~~~~~la~-~~~~~~~~~~A~~~~~~ 68 (125)
T 1na0_A 7 NSAEAWYNLGNAYYKQG---DYDEAIEYYQKA---------L----EL-DPNNAEAWYNLGN-AYYKQGDYDEAIEYYQK 68 (125)
T ss_dssp CHHHHHHHHHHHHHHTT---CHHHHHHHHHHH---------H----HH-CTTCHHHHHHHHH-HHHHTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcC---CHHHHHHHHHHH---------H----HH-CcCcHHHHHHHHH-HHHHhCCHHHHHHHHHH
Confidence 44678889999999999 999998766422 1 11 2333444444433 35567899999998877
Q ss_pred HHHHhhhhccCCCCChhhhHHHHHHHHhccCChhHHHHHHHHhHHhhhcchhHHHHHHHHHHHhc
Q 020832 238 VKKQVENKQLQLQPSDLIQFVFYVLQTLERDALPLFNMLRANYKASIEREPAFNEMLDDIAEKFF 302 (321)
Q Consensus 238 f~~~~~~~~~~~~~~PlLnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l~rd~~~~~~L~~Ig~~yF 302 (321)
..+..+. ....+.+..... .+.++ +..-.+.|...++.+|........+|..+.
T Consensus 69 ~~~~~~~-----~~~~~~~la~~~---~~~~~---~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 122 (125)
T 1na0_A 69 ALELDPN-----NAEAWYNLGNAY---YKQGD---YDEAIEYYQKALELDPNNAEAKQNLGNAKQ 122 (125)
T ss_dssp HHHHCTT-----CHHHHHHHHHHH---HHTTC---HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHhCCc-----cHHHHHHHHHHH---HHhcC---HHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 6654221 011122222211 22232 344455666667767777777777777654
No 84
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=80.92 E-value=26 Score=30.13 Aligned_cols=130 Identities=12% Similarity=0.055 Sum_probs=75.8
Q ss_pred CCHHHHHHHHHHHHhcCCCCChHHHhhHhhcC-----CChHHH---------------HHHHHH---------Hhh---c
Q 020832 158 GSPELHVMLAEYLYSESPELDMARVSFHFVRG-----NNPEKF---------------ASTIVN---------FMG---K 205 (321)
Q Consensus 158 Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~-----~~~~~~---------------a~~L~e---------w~~---~ 205 (321)
.++..+..+|.++...+ ++.+|..+|-.. +++..+ +..+.. ++. +
T Consensus 186 ~~~~~~~~la~~~~~~~---~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 262 (359)
T 3ieg_A 186 DNTEAFYKISTLYYQLG---DHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMK 262 (359)
T ss_dssp CCHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHhhCccchHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 57899999999999999 999988877532 222211 111110 000 1
Q ss_pred cCCChhHH----HHHHHHHHHHhcCChhHHHHHHHHHHHHhhhhccCCCCChh--hhHHHHHHHHhccCChhHHHHHHHH
Q 020832 206 CYPGEDDL----AVARAILMYLSLGNMKDANYIMDEVKKQVENKQLQLQPSDL--IQFVFYVLQTLERDALPLFNMLRAN 279 (321)
Q Consensus 206 ~~~~e~dl----fi~RaVL~~L~l~n~~~A~~~~~~f~~~~~~~~~~~~~~Pl--LnF~~lLl~t~e~~~~~~F~~L~~~ 279 (321)
..|..... +... ...+...++...|...++...+..| ..|. .+....+ ...+ -+..-.+.
T Consensus 263 ~~~~~~~~~~~~~~~l-a~~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~~~~~~---~~~g---~~~~A~~~ 328 (359)
T 3ieg_A 263 TEPSVAEYTVRSKERI-CHCFSKDEKPVEAIRICSEVLQMEP-------DNVNALKDRAEAY---LIEE---MYDEAIQD 328 (359)
T ss_dssp HCCSSHHHHHHHHHHH-HHHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHH---HHTT---CHHHHHHH
T ss_pred cCCCchHHHHHHHHHH-HHHHHHccCHHHHHHHHHHHHHhCc-------ccHHHHHHHHHHH---HHcC---CHHHHHHH
Confidence 12333221 2222 2345668999999999888776422 2222 2222211 1222 35566788
Q ss_pred hHHhhhcchhHHHHHHHHHHHhcCC
Q 020832 280 YKASIEREPAFNEMLDDIAEKFFGV 304 (321)
Q Consensus 280 Y~~~l~rd~~~~~~L~~Ig~~yFgi 304 (321)
|+..++.+|........+++.+.-+
T Consensus 329 ~~~a~~~~p~~~~~~~~l~~~~~~~ 353 (359)
T 3ieg_A 329 YEAAQEHNENDQQIREGLEKAQRLL 353 (359)
T ss_dssp HHHHHTTCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCChHHHHHHHHHHHHH
Confidence 8888888888887777777766543
No 85
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=80.69 E-value=18 Score=31.74 Aligned_cols=28 Identities=14% Similarity=0.150 Sum_probs=25.1
Q ss_pred CCHHHHHHHHHHHHhcCCCCChHHHhhHhhc
Q 020832 158 GSPELHVMLAEYLYSESPELDMARVSFHFVR 188 (321)
Q Consensus 158 Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~ 188 (321)
+++..|..+|.+|...| ++.+|..+|-.
T Consensus 70 ~~~~~~~~lg~~~~~~g---~~~~A~~~~~~ 97 (281)
T 2c2l_A 70 QSVKAHFFLGQCQLEME---SYDEAIANLQR 97 (281)
T ss_dssp TCHHHHHHHHHHHHHTT---CHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcC---CHHHHHHHHHH
Confidence 57899999999999999 99999998863
No 86
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=80.48 E-value=11 Score=28.00 Aligned_cols=82 Identities=10% Similarity=-0.027 Sum_probs=57.3
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHH
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARA 218 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~Ra 218 (321)
....++|++-. -.++..+..+|.+|.+.+ ++.+|..+|-.+- +-.|.....+..++
T Consensus 24 ~~~~~~al~~~-------p~~~~~~~~~a~~~~~~~---~~~~A~~~~~~al--------------~~~p~~~~~~~~lg 79 (126)
T 3upv_A 24 VKAYTEMIKRA-------PEDARGYSNRAAALAKLM---SFPEAIADCNKAI--------------EKDPNFVRAYIRKA 79 (126)
T ss_dssp HHHHHHHHHHC-------TTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHH--------------HHCTTCHHHHHHHH
T ss_pred HHHHHHHHHhC-------CCChHHHHHHHHHHHHhc---CHHHHHHHHHHHH--------------HhCCCcHHHHHHHH
Confidence 55566666543 247899999999999999 9999987663211 11244455566665
Q ss_pred HHHHHhcCChhHHHHHHHHHHHHhhhh
Q 020832 219 ILMYLSLGNMKDANYIMDEVKKQVENK 245 (321)
Q Consensus 219 VL~~L~l~n~~~A~~~~~~f~~~~~~~ 245 (321)
.+ +..+|+...|...+....+..|+.
T Consensus 80 ~~-~~~~~~~~~A~~~~~~al~~~p~~ 105 (126)
T 3upv_A 80 TA-QIAVKEYASALETLDAARTKDAEV 105 (126)
T ss_dssp HH-HHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HH-HHHHhCHHHHHHHHHHHHHhCccc
Confidence 54 567899999999998888766543
No 87
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=79.98 E-value=16 Score=28.09 Aligned_cols=39 Identities=13% Similarity=0.057 Sum_probs=30.7
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhh
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFV 187 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl 187 (321)
....++|+.-. -.+|..|..+|.+|...| ++.+|..+|-
T Consensus 72 ~~~~~~al~~~-------p~~~~~~~~lg~~~~~~g---~~~~A~~~~~ 110 (142)
T 2xcb_A 72 LQSYSYGALMD-------INEPRFPFHAAECHLQLG---DLDGAESGFY 110 (142)
T ss_dssp HHHHHHHHHHC-------TTCTHHHHHHHHHHHHTT---CHHHHHHHHH
T ss_pred HHHHHHHHhcC-------CCCcHHHHHHHHHHHHcC---CHHHHHHHHH
Confidence 55666666533 247899999999999999 9999998774
No 88
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=79.98 E-value=38 Score=31.35 Aligned_cols=62 Identities=16% Similarity=0.200 Sum_probs=40.5
Q ss_pred HHHHHhccC-ChhHHHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCC
Q 020832 20 KLEKIVNEG-NFYGAQQMYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGK 88 (321)
Q Consensus 20 rl~~~i~~G-~~YEAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~ 88 (321)
.|++.++.+ .-+.+++..=|++.+ .|++++|+.++.+| ++.++..-..++..+.|++|-+.+
T Consensus 88 ~l~~l~~~~~~~~~~~~~la~i~~~---~g~~eeAL~~l~~~----i~~~~~~~~lea~~l~vqi~L~~~ 150 (310)
T 3mv2_B 88 ELENLLKDKQNSPYELYLLATAQAI---LGDLDKSLETCVEG----IDNDEAEGTTELLLLAIEVALLNN 150 (310)
T ss_dssp HHHHTTTTSCCCHHHHHHHHHHHHH---HTCHHHHHHHHHHH----HTSSCSTTHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhcCCCCcHHHHHHHHHHHH---cCCHHHHHHHHHHH----hccCCCcCcHHHHHHHHHHHHHCC
Confidence 456666653 446667665555544 79999999999987 345443345666667777776654
No 89
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=79.96 E-value=27 Score=29.72 Aligned_cols=84 Identities=10% Similarity=0.168 Sum_probs=48.2
Q ss_pred CChhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHhhhhccCCCCCh--hhhHHHHHHHHhccCChhHHHHHHHHhHHhhh
Q 020832 208 PGEDDLAVARAILMYLSLGNMKDANYIMDEVKKQVENKQLQLQPSD--LIQFVFYVLQTLERDALPLFNMLRANYKASIE 285 (321)
Q Consensus 208 ~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f~~~~~~~~~~~~~~P--lLnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l~ 285 (321)
|.....+...+. .|...++...|...+....+..+ ..+ +.+....+ ...+. +..-.+.|+..++
T Consensus 169 ~~~~~~~~~la~-~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~l~~~~---~~~~~---~~~A~~~~~~a~~ 234 (327)
T 3cv0_A 169 PNDAQLHASLGV-LYNLSNNYDSAAANLRRAVELRP-------DDAQLWNKLGATL---ANGNR---PQEALDAYNRALD 234 (327)
T ss_dssp TTCHHHHHHHHH-HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHH---HHTTC---HHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHH-HHHHhccHHHHHHHHHHHHHhCC-------CcHHHHHHHHHHH---HHcCC---HHHHHHHHHHHHH
Confidence 444444444443 45678999999998887765422 222 12222211 12232 3444566666676
Q ss_pred cchhHHHHHHHHHHHhcCCC
Q 020832 286 REPAFNEMLDDIAEKFFGVK 305 (321)
Q Consensus 286 rd~~~~~~L~~Ig~~yFgi~ 305 (321)
.+|........+|..|+...
T Consensus 235 ~~~~~~~~~~~l~~~~~~~g 254 (327)
T 3cv0_A 235 INPGYVRVMYNMAVSYSNMS 254 (327)
T ss_dssp HCTTCHHHHHHHHHHHHHTT
T ss_pred cCCCCHHHHHHHHHHHHHhc
Confidence 67776777778888887654
No 90
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=79.87 E-value=20 Score=28.02 Aligned_cols=122 Identities=14% Similarity=0.105 Sum_probs=67.6
Q ss_pred CHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccC----------CChhHHHHHHHHHHHHhcCCh
Q 020832 159 SPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCY----------PGEDDLAVARAILMYLSLGNM 228 (321)
Q Consensus 159 dp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~----------~~e~dlfi~RaVL~~L~l~n~ 228 (321)
...-+...|..+++.+ +|.+|..+|-.+- .++-....... |....++..++. .|+.+++.
T Consensus 10 ~a~~~~~~G~~~~~~~---~~~~A~~~y~~al------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~-~~~~~~~~ 79 (162)
T 3rkv_A 10 SVEALRQKGNELFVQK---DYKEAIDAYRDAL------TRLDTLILREKPGEPEWVELDRKNIPLYANMSQ-CYLNIGDL 79 (162)
T ss_dssp HHHHHHHHHHHHHHTT---CHHHHHHHHHHHH------HHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHH-HHHHHTCH
T ss_pred HHHHHHHHHHHHHHcC---CHHHHHHHHHHHH------HHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH-HHHhcCcH
Confidence 4466788899999999 9999998875321 11111111111 233455666654 46788999
Q ss_pred hHHHHHHHHHHHHhhhhccCCCCChhhhHHHHHHHHhccCChhHHHHHHHHhHHhhhcchhHH-HHHHHHHHHh
Q 020832 229 KDANYIMDEVKKQVENKQLQLQPSDLIQFVFYVLQTLERDALPLFNMLRANYKASIEREPAFN-EMLDDIAEKF 301 (321)
Q Consensus 229 ~~A~~~~~~f~~~~~~~~~~~~~~PlLnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l~rd~~~~-~~L~~Ig~~y 301 (321)
..|...++..++.-|. ....+.+....+ ... .-|..-...|+..++-+|... .....|+.+.
T Consensus 80 ~~A~~~~~~al~~~p~-----~~~a~~~~g~~~---~~~---g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~ 142 (162)
T 3rkv_A 80 HEAEETSSEVLKREET-----NEKALFRRAKAR---IAA---WKLDEAEEDLKLLLRNHPAAASVVAREMKIVT 142 (162)
T ss_dssp HHHHHHHHHHHHHSTT-----CHHHHHHHHHHH---HHT---TCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCc-----chHHHHHHHHHH---HHH---hcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 9999987776653211 011112221111 112 234555677777777676655 3344444433
No 91
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=79.52 E-value=23 Score=28.87 Aligned_cols=22 Identities=9% Similarity=0.074 Sum_probs=13.5
Q ss_pred HHHhccCChhHHHHHHHHHHHH
Q 020832 22 EKIVNEGNFYGAQQMYKSISAR 43 (321)
Q Consensus 22 ~~~i~~G~~YEAhQ~~RTl~~R 43 (321)
......|+|=+|...++.....
T Consensus 65 ~~~~~~~~~~~A~~~~~~~~~~ 86 (243)
T 2q7f_A 65 NLLSSVNELERALAFYDKALEL 86 (243)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHc
Confidence 3445667777777766665543
No 92
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=79.46 E-value=16 Score=27.11 Aligned_cols=40 Identities=13% Similarity=0.107 Sum_probs=30.3
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhc
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFVR 188 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~ 188 (321)
...+++|++-. -+++..+..+|.+|...+ ++.+|..+|-.
T Consensus 63 ~~~~~~al~~~-------p~~~~~~~~l~~~~~~~~---~~~~A~~~~~~ 102 (137)
T 3q49_B 63 LADCRRALELD-------GQSVKAHFFLGQCQLEME---SYDEAIANLQR 102 (137)
T ss_dssp HHHHHHHHHHC-------TTCHHHHHHHHHHHHHTT---CHHHHHHHHHH
T ss_pred HHHHHHHHHhC-------chhHHHHHHHHHHHHHHh---hHHHHHHHHHH
Confidence 45556666532 237889999999999999 99999888753
No 93
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=78.72 E-value=42 Score=31.58 Aligned_cols=43 Identities=19% Similarity=0.274 Sum_probs=29.0
Q ss_pred HHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHh----cCCCCChHHHhhHhhc
Q 020832 141 FLKAAIKWSIEFGAPKTGSPELHVMLAEYLYS----ESPELDMARVSFHFVR 188 (321)
Q Consensus 141 fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~----e~~~~~~~~A~~Hfl~ 188 (321)
=.+.|+.|-.+.-. .|+|+-+..+|.+|.+ .+ ++.+|..+|-.
T Consensus 346 ~~~~A~~~~~~a~~--~~~~~a~~~Lg~~y~~g~g~~~---~~~~A~~~~~~ 392 (490)
T 2xm6_A 346 EHKKAVEWFRKAAA--KGEKAAQFNLGNALLQGKGVKK---DEQQAAIWMRK 392 (490)
T ss_dssp HHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHTSSSCC---CHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCCC---CHHHHHHHHHH
Confidence 34556666554421 3788888888888887 56 77777777654
No 94
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=78.27 E-value=34 Score=35.16 Aligned_cols=131 Identities=12% Similarity=0.087 Sum_probs=72.4
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHH
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARA 218 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~Ra 218 (321)
.+..++||+-. -.+++.|..+|.+|.+.| ++.+|..+|-.+- +-.|...+.+..++
T Consensus 29 i~~~~kAl~l~-------P~~~~a~~nLg~~l~~~g---~~~eA~~~~~~Al--------------~l~P~~~~a~~nLg 84 (723)
T 4gyw_A 29 VRLYRKALEVF-------PEFAAAHSNLASVLQQQG---KLQEALMHYKEAI--------------RISPTFADAYSNMG 84 (723)
T ss_dssp HHHHHHHHHHC-------SCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHH--------------HHCTTCHHHHHHHH
T ss_pred HHHHHHHHHhC-------CCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHH--------------HhCCCCHHHHHHHH
Confidence 56677777642 247899999999999999 9999998874210 11233344444444
Q ss_pred HHHHHhcCChhHHHHHHHHHHHHhhhhccCCCCChhhhHHHHHHHHhccCChhHHHHHHHHhHHhhhcchhHHHHHHHHH
Q 020832 219 ILMYLSLGNMKDANYIMDEVKKQVENKQLQLQPSDLIQFVFYVLQTLERDALPLFNMLRANYKASIEREPAFNEMLDDIA 298 (321)
Q Consensus 219 VL~~L~l~n~~~A~~~~~~f~~~~~~~~~~~~~~PlLnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l~rd~~~~~~L~~Ig 298 (321)
.+ |..+++...|...|+.-.+.-++ .....+-+..++.. . .-+..-.+.|+..|+.+|.....+..+|
T Consensus 85 ~~-l~~~g~~~~A~~~~~kAl~l~P~------~~~a~~~Lg~~~~~--~---g~~~eAi~~~~~Al~l~P~~~~a~~~L~ 152 (723)
T 4gyw_A 85 NT-LKEMQDVQGALQCYTRAIQINPA------FADAHSNLASIHKD--S---GNIPEAIASYRTALKLKPDFPDAYCNLA 152 (723)
T ss_dssp HH-HHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHH--T---TCHHHHHHHHHHHHHHCSCCHHHHHHHH
T ss_pred HH-HHHcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHH--c---CCHHHHHHHHHHHHHhCCCChHHHhhhh
Confidence 33 35566777776666555442211 11111111111111 1 1233445566666666666666666666
Q ss_pred HHhcCCC
Q 020832 299 EKFFGVK 305 (321)
Q Consensus 299 ~~yFgi~ 305 (321)
..|..+.
T Consensus 153 ~~l~~~g 159 (723)
T 4gyw_A 153 HCLQIVC 159 (723)
T ss_dssp HHHHHTT
T ss_pred hHHHhcc
Confidence 6665443
No 95
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=77.63 E-value=37 Score=29.94 Aligned_cols=90 Identities=12% Similarity=0.096 Sum_probs=60.2
Q ss_pred HHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcC--CChH-HHHHHHHHHh---h------------
Q 020832 143 KAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFVRG--NNPE-KFASTIVNFM---G------------ 204 (321)
Q Consensus 143 ~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~--~~~~-~~a~~L~ew~---~------------ 204 (321)
..|+++-.+ -++++.|..+|.+|.+.| ++.+|..+|-.. .+|+ ....+...|. .
T Consensus 118 ~~Al~~l~~-----~~~~~~~~~l~~~~~~~g---~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~ 189 (291)
T 3mkr_A 118 DAALRTLHQ-----GDSLECMAMTVQILLKLD---RLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIF 189 (291)
T ss_dssp HHHHHHHTT-----CCSHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHHHHHHHHH
T ss_pred HHHHHHHhC-----CCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCchHHHHHHHHH
Confidence 455666554 368999999999999999 999998887532 1232 2222222221 1
Q ss_pred ----ccCCChhHHHHHHHHHHHHhcCChhHHHHHHHHHHHH
Q 020832 205 ----KCYPGEDDLAVARAILMYLSLGNMKDANYIMDEVKKQ 241 (321)
Q Consensus 205 ----~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f~~~ 241 (321)
+..|...+++..+++. +...|+...|...+..-.+.
T Consensus 190 ~~~l~~~p~~~~~~~~la~~-~~~~g~~~eA~~~l~~al~~ 229 (291)
T 3mkr_A 190 QEMADKCSPTLLLLNGQAAC-HMAQGRWEAAEGVLQEALDK 229 (291)
T ss_dssp HHHHHHSCCCHHHHHHHHHH-HHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCcHHHHHHHHHH-HHHcCCHHHHHHHHHHHHHh
Confidence 1245666667777664 57889999999998877664
No 96
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=77.34 E-value=18 Score=29.17 Aligned_cols=122 Identities=8% Similarity=0.019 Sum_probs=72.9
Q ss_pred hhHHHHHHHHHHhccCChhHHHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCCC
Q 020832 13 PAQENIDKLEKIVNEGNFYGAQQMYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAYD 92 (321)
Q Consensus 13 ~~~r~l~rl~~~i~~G~~YEAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~ 92 (321)
-++.+-.++..-+.+|..|+-- -+-..+-.+.++.-+..+.+.|++..|.+.....++. .|-+
T Consensus 7 ~~~~~~~~l~~~~~~~~~l~~a------------l~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~-----~P~~ 69 (151)
T 3gyz_A 7 ENESISTAVIDAINSGATLKDI------------NAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIY-----DFYN 69 (151)
T ss_dssp --CHHHHHHHHHHHTSCCTGGG------------CCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC
T ss_pred HHHHHHHHHHHHHHCCCCHHHH------------hCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC
Confidence 3455667777777777665321 1112334455666666667777776666654444432 2333
Q ss_pred hhHHHHHHHHHHhCCCCCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHh
Q 020832 93 NENLDRVRKIYELFPQIPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYS 172 (321)
Q Consensus 93 ~~~~~rl~~l~~~~p~~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~ 172 (321)
......+..++.... + .+|| ....++|++-. -.+|..|..+|.+|.+
T Consensus 70 ~~~~~~lg~~~~~~g-----~----------~~~A-----------i~~~~~al~l~-------P~~~~~~~~lg~~~~~ 116 (151)
T 3gyz_A 70 VDYIMGLAAIYQIKE-----Q----------FQQA-----------ADLYAVAFALG-------KNDYTPVFHTGQCQLR 116 (151)
T ss_dssp HHHHHHHHHHHHHTT-----C----------HHHH-----------HHHHHHHHHHS-------SSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc-----c----------HHHH-----------HHHHHHHHhhC-------CCCcHHHHHHHHHHHH
Confidence 444455555554322 1 2333 55566666532 2478999999999999
Q ss_pred cCCCCChHHHhhHhh
Q 020832 173 ESPELDMARVSFHFV 187 (321)
Q Consensus 173 e~~~~~~~~A~~Hfl 187 (321)
.| ++.+|..+|-
T Consensus 117 lg---~~~eA~~~~~ 128 (151)
T 3gyz_A 117 LK---APLKAKECFE 128 (151)
T ss_dssp TT---CHHHHHHHHH
T ss_pred cC---CHHHHHHHHH
Confidence 99 9999998885
No 97
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=76.54 E-value=35 Score=29.07 Aligned_cols=122 Identities=6% Similarity=-0.049 Sum_probs=68.9
Q ss_pred CHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccC----CChhHHHHHHHHHHHHhcCChhHHHHH
Q 020832 159 SPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCY----PGEDDLAVARAILMYLSLGNMKDANYI 234 (321)
Q Consensus 159 dp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~----~~e~dlfi~RaVL~~L~l~n~~~A~~~ 234 (321)
++..+..+|.++...+ ++.+|..+|-. .+-..-..+. +.....+...+. .|...|+...|...
T Consensus 192 ~~~~~~~l~~~~~~~~---~~~~A~~~~~~---------a~~~~~~~~~~~~~~~~~~~~~~la~-~~~~~g~~~~A~~~ 258 (330)
T 3hym_B 192 DPFVMHEVGVVAFQNG---EWKTAEKWFLD---------ALEKIKAIGNEVTVDKWEPLLNNLGH-VCRKLKKYAEALDY 258 (330)
T ss_dssp CHHHHHHHHHHHHHTT---CHHHHHHHHHH---------HHHHHTTTSCSCTTTTCCHHHHHHHH-HHHHTTCHHHHHHH
T ss_pred ChHHHHHHHHHHHHcc---cHHHHHHHHHH---------HHHHhhhccccccccHHHHHHHHHHH-HHHHhcCHHHHHHH
Confidence 4556666666666666 66665544321 1111111111 222344555444 46788999999999
Q ss_pred HHHHHHHhhhhccCCCCChhhhHHHHHHHHhccCChhHHHHHHHHhHHhhhcchhHHHHHHHHHHHhcCC
Q 020832 235 MDEVKKQVENKQLQLQPSDLIQFVFYVLQTLERDALPLFNMLRANYKASIEREPAFNEMLDDIAEKFFGV 304 (321)
Q Consensus 235 ~~~f~~~~~~~~~~~~~~PlLnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l~rd~~~~~~L~~Ig~~yFgi 304 (321)
+....+..+. ....+.+....+. ..+ -+..-.+.|+..++.+|........+|..|...
T Consensus 259 ~~~a~~~~~~-----~~~~~~~la~~~~---~~g---~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 317 (330)
T 3hym_B 259 HRQALVLIPQ-----NASTYSAIGYIHS---LMG---NFENAVDYFHTALGLRRDDTFSVTMLGHCIEMY 317 (330)
T ss_dssp HHHHHHHSTT-----CSHHHHHHHHHHH---HHT---CHHHHHHHHHTTTTTCSCCHHHHHHHHHHHHTT
T ss_pred HHHHHhhCcc-----chHHHHHHHHHHH---Hhc---cHHHHHHHHHHHHccCCCchHHHHHHHHHHHHH
Confidence 8887764321 1112223222222 122 345566788888888888888899999887544
No 98
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=76.52 E-value=19 Score=26.05 Aligned_cols=68 Identities=15% Similarity=0.027 Sum_probs=47.6
Q ss_pred CCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHHHHH
Q 020832 158 GSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYIMDE 237 (321)
Q Consensus 158 Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~ 237 (321)
.+|..+..+|.+|++.+ ++.+|..+|-..- +-.|...+.+...+. .|...|+...|...+..
T Consensus 5 ~~~~~~~~lg~~~~~~g---~~~~A~~~~~~al--------------~~~p~~~~a~~~lg~-~~~~~g~~~~A~~~~~~ 66 (100)
T 3ma5_A 5 EDPFTRYALAQEHLKHD---NASRALALFEELV--------------ETDPDYVGTYYHLGK-LYERLDRTDDAIDTYAQ 66 (100)
T ss_dssp CCHHHHHHHHHHHHHTT---CHHHHHHHHHHHH--------------HHSTTCTHHHHHHHH-HHHHTTCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcC---CHHHHHHHHHHHH--------------HhCCCcHHHHHHHHH-HHHHcCCHHHHHHHHHH
Confidence 47899999999999999 9999997764211 112344444555554 35678888888888877
Q ss_pred HHHHhh
Q 020832 238 VKKQVE 243 (321)
Q Consensus 238 f~~~~~ 243 (321)
..+..+
T Consensus 67 al~l~~ 72 (100)
T 3ma5_A 67 GIEVAR 72 (100)
T ss_dssp HHHHHH
T ss_pred HHhhhh
Confidence 765443
No 99
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=76.46 E-value=56 Score=31.39 Aligned_cols=69 Identities=12% Similarity=0.119 Sum_probs=44.2
Q ss_pred CHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHHHHHH
Q 020832 159 SPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYIMDEV 238 (321)
Q Consensus 159 dp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f 238 (321)
...|...+|..|..+| ++.+|. +.+.++..|........+.=-|++.-+=.|+..+|..-|..++..-
T Consensus 136 rarl~~~La~i~e~~g---~~~eA~---------~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki 203 (445)
T 4b4t_P 136 RARVTKDLVEIKKEEG---KIDEAA---------DILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKI 203 (445)
T ss_dssp HHHHHHHHHHHHHHHT---CHHHHH---------HHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcc---CHHHHH---------HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 3467788888888888 887776 3455555554332222222225555666678889999998876654
Q ss_pred H
Q 020832 239 K 239 (321)
Q Consensus 239 ~ 239 (321)
.
T Consensus 204 ~ 204 (445)
T 4b4t_P 204 L 204 (445)
T ss_dssp H
T ss_pred H
Confidence 3
No 100
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=76.43 E-value=46 Score=30.46 Aligned_cols=93 Identities=11% Similarity=0.008 Sum_probs=52.0
Q ss_pred ChhHHHHHHHHHHHHh---cCChhHHHHHHHHHHHHhhhhccCCCCC----hhhhHHHHHHH--HhccCChhHHHHHHHH
Q 020832 209 GEDDLAVARAILMYLS---LGNMKDANYIMDEVKKQVENKQLQLQPS----DLIQFVFYVLQ--TLERDALPLFNMLRAN 279 (321)
Q Consensus 209 ~e~dlfi~RaVL~~L~---l~n~~~A~~~~~~f~~~~~~~~~~~~~~----PlLnF~~lLl~--t~e~~~~~~F~~L~~~ 279 (321)
.+.+.++.++.. ++. .++...|...+....+..+......|.. |..--+++.+- -...+ -|..-.+.
T Consensus 184 ~~~~~~~~~~~~-~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~A~~~ 259 (514)
T 2gw1_A 184 NEADKELMNGLS-NLYKRSPESYDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFLKN---DPLGAHED 259 (514)
T ss_dssp CHHHHHHHHHHH-HHSSCCTTHHHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHHSS---CHHHHHHH
T ss_pred cHHHHHHHHHHH-HHHhhhhccHHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHHCC---CHHHHHHH
Confidence 335556666554 344 7899999998888776432111000111 21111222221 11223 34455667
Q ss_pred hHHhhhcchhHHHHHHHHHHHhcCCCC
Q 020832 280 YKASIEREPAFNEMLDDIAEKFFGVKR 306 (321)
Q Consensus 280 Y~~~l~rd~~~~~~L~~Ig~~yFgi~~ 306 (321)
|...++.+|. ......+|..|+....
T Consensus 260 ~~~~l~~~~~-~~~~~~l~~~~~~~~~ 285 (514)
T 2gw1_A 260 IKKAIELFPR-VNSYIYMALIMADRND 285 (514)
T ss_dssp HHHHHHHCCC-HHHHHHHHHHHHTSSC
T ss_pred HHHHHhhCcc-HHHHHHHHHHHHHCCC
Confidence 7777777888 8888888998887753
No 101
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=76.32 E-value=11 Score=29.62 Aligned_cols=111 Identities=13% Similarity=0.093 Sum_probs=62.1
Q ss_pred hhHHHHHHHHHHhccCChhHHHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCCC
Q 020832 13 PAQENIDKLEKIVNEGNFYGAQQMYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAYD 92 (321)
Q Consensus 13 ~~~r~l~rl~~~i~~G~~YEAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~ 92 (321)
.+++.++.++..+.... |-...+-.+..=|...|+|++|++.+.+.... .|-+
T Consensus 12 ~~e~ai~~~~~a~~~~p--~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~-------------------------~p~~ 64 (150)
T 4ga2_A 12 DVERYIASVQGSTPSPR--QKSIKGFYFAKLYYEAKEYDLAKKYICTYINV-------------------------QERD 64 (150)
T ss_dssp HHHHHHHHHHHHSCSHH--HHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHH-------------------------CTTC
T ss_pred hHHHHHHHHHHhcccCc--ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------------------------CCCC
Confidence 56677777777666422 22222334556667777888887776654321 1222
Q ss_pred hhHHHHHHHHHHhCCCCCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHh
Q 020832 93 NENLDRVRKIYELFPQIPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYS 172 (321)
Q Consensus 93 ~~~~~rl~~l~~~~p~~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~ 172 (321)
.+....+..++..... .+++ ....++|++-. -.+++.|..+|.+|.+
T Consensus 65 ~~a~~~lg~~~~~~~~---------------~~~A-----------~~~~~~al~~~-------p~~~~~~~~la~~~~~ 111 (150)
T 4ga2_A 65 PKAHRFLGLLYELEEN---------------TDKA-----------VECYRRSVELN-------PTQKDLVLKIAELLCK 111 (150)
T ss_dssp HHHHHHHHHHHHHTTC---------------HHHH-----------HHHHHHHHHHC-------TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCc---------------hHHH-----------HHHHHHHHHhC-------CCCHHHHHHHHHHHHH
Confidence 3333444455443210 1222 45555665432 2478899999999998
Q ss_pred cCCCCChHHHhhHh
Q 020832 173 ESPELDMARVSFHF 186 (321)
Q Consensus 173 e~~~~~~~~A~~Hf 186 (321)
.+ ++.+|..+|
T Consensus 112 ~~---~~~~aa~~~ 122 (150)
T 4ga2_A 112 ND---VTDGRAKYW 122 (150)
T ss_dssp HC---SSSSHHHHH
T ss_pred cC---ChHHHHHHH
Confidence 88 776654443
No 102
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=76.14 E-value=23 Score=27.80 Aligned_cols=39 Identities=13% Similarity=0.113 Sum_probs=30.3
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhh
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFV 187 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl 187 (321)
....++|+.-. -.+|..|..+|.+|...| ++.+|..+|-
T Consensus 75 ~~~~~~al~l~-------p~~~~~~~~lg~~~~~~g---~~~~A~~~~~ 113 (148)
T 2vgx_A 75 IHSYSYGAVMD-------IXEPRFPFHAAECLLQXG---ELAEAESGLF 113 (148)
T ss_dssp HHHHHHHHHHS-------TTCTHHHHHHHHHHHHTT---CHHHHHHHHH
T ss_pred HHHHHHHHhcC-------CCCchHHHHHHHHHHHcC---CHHHHHHHHH
Confidence 45556665532 247899999999999999 9999998875
No 103
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=76.10 E-value=28 Score=33.55 Aligned_cols=27 Identities=15% Similarity=0.017 Sum_probs=23.9
Q ss_pred CCHHHHHHHHHHHHhcCCCCChHHHhhHhh
Q 020832 158 GSPELHVMLAEYLYSESPELDMARVSFHFV 187 (321)
Q Consensus 158 Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl 187 (321)
++++.+..+|..|...+ ++.+|..+|-
T Consensus 21 ~~~~~~~~lg~~~~~~g---~~~~A~~~~~ 47 (568)
T 2vsy_A 21 QDFVAWLMLADAELGMG---DTTAGEMAVQ 47 (568)
T ss_dssp CCHHHHHHHHHHHHHHT---CHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcC---CHHHHHHHHH
Confidence 57899999999999999 9999988775
No 104
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=75.98 E-value=20 Score=28.84 Aligned_cols=78 Identities=9% Similarity=-0.019 Sum_probs=53.2
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHH
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARA 218 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~Ra 218 (321)
....++++.-. -.+|..|..+|.+|...+ +|.+|..+|-.+ -+-.|...+.+...+
T Consensus 56 ~~~~~~al~~~-------P~~~~~~~~lg~~~~~~g---~~~~Ai~~~~~a--------------l~l~P~~~~~~~~lg 111 (151)
T 3gyz_A 56 EVFFRFLCIYD-------FYNVDYIMGLAAIYQIKE---QFQQAADLYAVA--------------FALGKNDYTPVFHTG 111 (151)
T ss_dssp HHHHHHHHHHC-------TTCHHHHHHHHHHHHHTT---CHHHHHHHHHHH--------------HHHSSSCCHHHHHHH
T ss_pred HHHHHHHHHhC-------CCCHHHHHHHHHHHHHHc---cHHHHHHHHHHH--------------HhhCCCCcHHHHHHH
Confidence 45555665432 247889999999999999 998888665321 111344455555555
Q ss_pred HHHHHhcCChhHHHHHHHHHHHH
Q 020832 219 ILMYLSLGNMKDANYIMDEVKKQ 241 (321)
Q Consensus 219 VL~~L~l~n~~~A~~~~~~f~~~ 241 (321)
+ .|+.+|+...|...|+...+.
T Consensus 112 ~-~~~~lg~~~eA~~~~~~al~l 133 (151)
T 3gyz_A 112 Q-CQLRLKAPLKAKECFELVIQH 133 (151)
T ss_dssp H-HHHHTTCHHHHHHHHHHHHHH
T ss_pred H-HHHHcCCHHHHHHHHHHHHHh
Confidence 4 467899999999998887764
No 105
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=75.71 E-value=54 Score=30.89 Aligned_cols=43 Identities=12% Similarity=-0.069 Sum_probs=28.5
Q ss_pred HHHHHHhhhcCCCCCCCHHHHHHHHHHHHhc-CCCCChHHHhhHhhc
Q 020832 143 KAAIKWSIEFGAPKTGSPELHVMLAEYLYSE-SPELDMARVSFHFVR 188 (321)
Q Consensus 143 ~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e-~~~~~~~~A~~Hfl~ 188 (321)
..|++|-.+.- .|+|.-+..+|.+|.+. +...++.+|..+|-.
T Consensus 304 ~~A~~~~~~Aa---~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~ 347 (452)
T 3e4b_A 304 KAAEAHFEKAV---GREVAADYYLGQIYRRGYLGKVYPQKALDHLLT 347 (452)
T ss_dssp HHHHHHHHTTT---TTCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHh---CCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHH
Confidence 45667766544 67888888888888762 112377777777765
No 106
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=74.44 E-value=38 Score=28.52 Aligned_cols=120 Identities=16% Similarity=0.238 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHh--------cCChhHH
Q 020832 160 PELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLS--------LGNMKDA 231 (321)
Q Consensus 160 p~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~--------l~n~~~A 231 (321)
++.+..+|.+|++.+ ++.+|..+|-. .+-.. ...+...+.+...+. .+.. .++...|
T Consensus 52 ~~a~~~lg~~~~~~~---~~~~A~~~~~~---------~l~~~--p~~~~~~~a~~~lg~-~~~~~~~~~~~~~~~~~~A 116 (261)
T 3qky_A 52 ADAQFYLARAYYQNK---EYLLAASEYER---------FIQIY--QIDPRVPQAEYERAM-CYYKLSPPYELDQTDTRKA 116 (261)
T ss_dssp HHHHHHHHHHHHHTT---CHHHHHHHHHH---------HHHHC--TTCTTHHHHHHHHHH-HHHHHCCCTTSCCHHHHHH
T ss_pred HHHHHHHHHHHHHhC---cHHHHHHHHHH---------HHHHC--CCCchhHHHHHHHHH-HHHHhcccccccchhHHHH
Confidence 789999999999999 99998866532 11100 001122223333333 3444 7889999
Q ss_pred HHHHHHHHHHhhhhccCCCCChhhhHHH--------------HHH--HHhccCChhHHHHHHHHhHHhhhcchh---HHH
Q 020832 232 NYIMDEVKKQVENKQLQLQPSDLIQFVF--------------YVL--QTLERDALPLFNMLRANYKASIEREPA---FNE 292 (321)
Q Consensus 232 ~~~~~~f~~~~~~~~~~~~~~PlLnF~~--------------lLl--~t~e~~~~~~F~~L~~~Y~~~l~rd~~---~~~ 292 (321)
...|..+.+..|. .|...-+. +.+ .-.+.+ -|..-...|+..++.+|. ..+
T Consensus 117 ~~~~~~~l~~~p~-------~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g---~~~~A~~~~~~~l~~~p~~~~~~~ 186 (261)
T 3qky_A 117 IEAFQLFIDRYPN-------HELVDDATQKIRELRAKLARKQYEAARLYERRE---LYEAAAVTYEAVFDAYPDTPWADD 186 (261)
T ss_dssp HHHHHHHHHHCTT-------CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCTTSTTHHH
T ss_pred HHHHHHHHHHCcC-------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc---CHHHHHHHHHHHHHHCCCCchHHH
Confidence 9998888875542 22222111 111 111222 234455666666666655 677
Q ss_pred HHHHHHHHhcCC
Q 020832 293 MLDDIAEKFFGV 304 (321)
Q Consensus 293 ~L~~Ig~~yFgi 304 (321)
.+-.+|..|+.+
T Consensus 187 a~~~l~~~~~~~ 198 (261)
T 3qky_A 187 ALVGAMRAYIAY 198 (261)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 888888888854
No 107
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=74.12 E-value=30 Score=27.15 Aligned_cols=39 Identities=10% Similarity=0.176 Sum_probs=29.4
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhh
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFV 187 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl 187 (321)
...++++++-. -.++..+..+|.+|...+ ++.+|..+|-
T Consensus 101 ~~~~~~al~~~-------p~~~~~~~~la~~~~~~g---~~~~A~~~~~ 139 (177)
T 2e2e_A 101 RAMIDKALALD-------SNEITALMLLASDAFMQA---NYAQAIELWQ 139 (177)
T ss_dssp HHHHHHHHHHC-------TTCHHHHHHHHHHHHHTT---CHHHHHHHHH
T ss_pred HHHHHHHHHhC-------CCcHHHHHHHHHHHHHcc---cHHHHHHHHH
Confidence 45556665432 247899999999999999 9999887664
No 108
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=73.81 E-value=84 Score=32.20 Aligned_cols=116 Identities=15% Similarity=0.079 Sum_probs=68.0
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHH
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARA 218 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~Ra 218 (321)
....++||+-. -.+++.|..+|.+|.+.+ ++.+|..+|-.+ + +-.|...+.+..++
T Consensus 63 ~~~~~~Al~l~-------P~~~~a~~nLg~~l~~~g---~~~~A~~~~~kA---------l-----~l~P~~~~a~~~Lg 118 (723)
T 4gyw_A 63 LMHYKEAIRIS-------PTFADAYSNMGNTLKEMQ---DVQGALQCYTRA---------I-----QINPAFADAHSNLA 118 (723)
T ss_dssp HHHHHHHHHHC-------TTCHHHHHHHHHHHHHTT---CHHHHHHHHHHH---------H-----HHCTTCHHHHHHHH
T ss_pred HHHHHHHHHhC-------CCCHHHHHHHHHHHHHcC---CHHHHHHHHHHH---------H-----HhCCCCHHHHHHHH
Confidence 44555565432 246788888888888888 888887665321 0 11344455555555
Q ss_pred HHHHHhcCChhHHHHHHHHHHHHhhhhccCCCCChhhhHHHHHHHHhccCC-hhHHHHHHHHhHHhh
Q 020832 219 ILMYLSLGNMKDANYIMDEVKKQVENKQLQLQPSDLIQFVFYVLQTLERDA-LPLFNMLRANYKASI 284 (321)
Q Consensus 219 VL~~L~l~n~~~A~~~~~~f~~~~~~~~~~~~~~PlLnF~~lLl~t~e~~~-~~~F~~L~~~Y~~~l 284 (321)
.+ |..+|+...|...|+.-.+.-|+ ....+.|....+...++.+. ...|+.+.+.....+
T Consensus 119 ~~-~~~~g~~~eAi~~~~~Al~l~P~-----~~~a~~~L~~~l~~~g~~~~A~~~~~kal~l~~~~~ 179 (723)
T 4gyw_A 119 SI-HKDSGNIPEAIASYRTALKLKPD-----FPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQL 179 (723)
T ss_dssp HH-HHHTTCHHHHHHHHHHHHHHCSC-----CHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHHH
T ss_pred HH-HHHcCCHHHHHHHHHHHHHhCCC-----ChHHHhhhhhHHHhcccHHHHHHHHHHHHHhChhHH
Confidence 54 45678888888777665543221 12345666666666666554 356666655554443
No 109
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=73.69 E-value=56 Score=31.38 Aligned_cols=112 Identities=6% Similarity=0.032 Sum_probs=55.7
Q ss_pred CCHHH----HHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHH
Q 020832 158 GSPEL----HVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANY 233 (321)
Q Consensus 158 Gdp~L----H~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~ 233 (321)
.+|++ ....|.++..++ +|.+|-+||.-.-+ .....+.+....-.+-.+|+..+.......-..
T Consensus 212 ~~~~lk~~~~~~~~~~~~~e~---~y~~a~~~y~e~~~---------~~~~~~d~~~~~~~L~~~v~~~iLa~~~~~~~~ 279 (445)
T 4b4t_P 212 KYESLKLEYYNLLVKISLHKR---EYLEVAQYLQEIYQ---------TDAIKSDEAKWKPVLSHIVYFLVLSPYGNLQND 279 (445)
T ss_dssp CCHHHHHHHHHHHHHHHHHHC---CHHHHHHHHHHHHH---------HHHHHSCHHHHHHHHHHHHHHHHHSSCSSTTHH
T ss_pred CcHHHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHh---------cccccCCHHHHHHHHHHHHHHHHhCCCCchHHH
Confidence 46654 456788888899 99988888763211 111112111111123333333333222221122
Q ss_pred HHHHHHHHhhhhccCCCCChhhhHHHHHHHHhccCChhHHHHHHHHhHHhhhcchh
Q 020832 234 IMDEVKKQVENKQLQLQPSDLIQFVFYVLQTLERDALPLFNMLRANYKASIEREPA 289 (321)
Q Consensus 234 ~~~~f~~~~~~~~~~~~~~PlLnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l~rd~~ 289 (321)
++..... .. ..+-+--..-|+.+.......-|..+.+.|.+.|..||.
T Consensus 280 ll~~~~~-----~~---~~~~l~~~~~L~k~f~~~~L~~~~~~~~~~~~~L~~~~~ 327 (445)
T 4b4t_P 280 LIHKIQN-----DN---NLKKLESQESLVKLFTTNELMRWPIVQKTYEPVLNEDDL 327 (445)
T ss_dssp HHHSHHH-----HS---SCHHHHHHHHHHHHHHHCCSSSHHHHHHHTCSSTTTCCS
T ss_pred HHHHHhh-----cc---cccccHHHHHHHHHHHhchHhhhHHHHHHHHHHhcccch
Confidence 2211111 01 112233334567777777777888888888888776654
No 110
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=73.26 E-value=38 Score=28.03 Aligned_cols=77 Identities=19% Similarity=0.184 Sum_probs=51.2
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHH
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARA 218 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~Ra 218 (321)
...+++|++=. -.++..+..+|.+|...| ++.+|..+|-.. ++. . ...+.+...+
T Consensus 104 ~~~~~~al~~~-------P~~~~~~~~lg~~~~~~g---~~~~A~~~~~~a----------l~~---~--~~~~~~~~la 158 (217)
T 2pl2_A 104 LSVLKDAERVN-------PRYAPLHLQRGLVYALLG---ERDKAEASLKQA----------LAL---E--DTPEIRSALA 158 (217)
T ss_dssp HHHHHHHHHHC-------TTCHHHHHHHHHHHHHTT---CHHHHHHHHHHH----------HHH---C--CCHHHHHHHH
T ss_pred HHHHHHHHHhC-------cccHHHHHHHHHHHHHcC---ChHHHHHHHHHH----------Hhc---c--cchHHHHHHH
Confidence 45556665421 248899999999999999 999998666421 111 1 2233444444
Q ss_pred HHHHHhcCChhHHHHHHHHHHHH
Q 020832 219 ILMYLSLGNMKDANYIMDEVKKQ 241 (321)
Q Consensus 219 VL~~L~l~n~~~A~~~~~~f~~~ 241 (321)
.+ |...|+...|...++...+.
T Consensus 159 ~~-~~~~g~~~~A~~~~~~al~~ 180 (217)
T 2pl2_A 159 EL-YLSMGRLDEALAQYAKALEQ 180 (217)
T ss_dssp HH-HHHHTCHHHHHHHHHHHHHH
T ss_pred HH-HHHcCCHHHHHHHHHHHHHh
Confidence 43 67789999999888777664
No 111
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=73.14 E-value=23 Score=28.13 Aligned_cols=29 Identities=7% Similarity=0.045 Sum_probs=25.5
Q ss_pred CCHHHHHHHHHHHHhcCCCCChHHHhhHhhcC
Q 020832 158 GSPELHVMLAEYLYSESPELDMARVSFHFVRG 189 (321)
Q Consensus 158 Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~ 189 (321)
++++.|..+|.++...| ++.+|..+|-..
T Consensus 38 ~~~~a~~~la~~~~~~g---~~~~A~~~~~~a 66 (176)
T 2r5s_A 38 SRGDVKLAKADCLLETK---QFELAQELLATI 66 (176)
T ss_dssp TSHHHHHHHHHHHHHTT---CHHHHHHHHTTC
T ss_pred CcHHHHHHHHHHHHHCC---CHHHHHHHHHHh
Confidence 47899999999999999 999999888643
No 112
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=71.99 E-value=59 Score=29.67 Aligned_cols=52 Identities=15% Similarity=-0.040 Sum_probs=33.9
Q ss_pred hhHHHHHHHHHHhccCChhHHHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHH
Q 020832 13 PAQENIDKLEKIVNEGNFYGAQQMYKSISARYVAAQRYSEALDLLHAGACLQ 64 (321)
Q Consensus 13 ~~~r~l~rl~~~i~~G~~YEAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~l 64 (321)
.+....+++...++..+.-.--.+|-.+..=|..+|+|++|++.+.+...+.
T Consensus 30 ~l~~~e~~~~~~~~~~~~~~~a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~ 81 (472)
T 4g1t_A 30 SLDDFEDKVFYRTEFQNREFKATMCNLLAYLKHLKGQNEAALECLRKAEELI 81 (472)
T ss_dssp CHHHHHHHHHHHTTSCC---CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 3555666776666654432223466667777788999999999988765544
No 113
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=71.40 E-value=12 Score=26.20 Aligned_cols=42 Identities=10% Similarity=-0.044 Sum_probs=30.6
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhc-CCCCChHHHhhHhhc
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSE-SPELDMARVSFHFVR 188 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e-~~~~~~~~A~~Hfl~ 188 (321)
..+++++++-.. ...++..+..+|.++... + ++.+|..+|-.
T Consensus 60 ~~~~~~a~~~~~-----~~~~~~~~~~l~~~~~~~~~---~~~~A~~~~~~ 102 (112)
T 2kck_A 60 VDCYNYVINVIE-----DEYNKDVWAAKADALRYIEG---KEVEAEIAEAR 102 (112)
T ss_dssp HHHHHHHHHTSC-----CTTCHHHHHHHHHHHTTCSS---CSHHHHHHHHH
T ss_pred HHHHHHHHHhCc-----ccchHHHHHHHHHHHHHHhC---CHHHHHHHHHH
Confidence 455566664321 134789999999999999 9 99999888754
No 114
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=71.17 E-value=44 Score=27.77 Aligned_cols=244 Identities=13% Similarity=0.067 Sum_probs=115.0
Q ss_pred hhHHHHHHHHHHhccC-ChhHHHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCC
Q 020832 13 PAQENIDKLEKIVNEG-NFYGAQQMYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAY 91 (321)
Q Consensus 13 ~~~r~l~rl~~~i~~G-~~YEAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~ 91 (321)
..++.+.-+++.++.. +.-++ +..+..=|...++|++|++.+..... .- +....-+..-..+-.++...+-.
T Consensus 18 ~~~~A~~~~~~~l~~~p~~~~~---~~~l~~~~~~~~~~~~A~~~~~~a~~-~~--~~~~~~~~~~~~lg~~~~~~~~~- 90 (272)
T 3u4t_A 18 NYAEAIEVFNKLEAKKYNSPYI---YNRRAVCYYELAKYDLAQKDIETYFS-KV--NATKAKSADFEYYGKILMKKGQD- 90 (272)
T ss_dssp CHHHHHHHHHHHHHTTCCCSTT---HHHHHHHHHHTTCHHHHHHHHHHHHT-TS--CTTTCCHHHHHHHHHHHHHTTCH-
T ss_pred CHHHHHHHHHHHHHhCCCcHHH---HHHHHHHHHHHhhHHHHHHHHHHHHh-cc--CchhHHHHHHHHHHHHHHHcccH-
Confidence 4555556565555432 22222 33344456678888888888876554 11 11111111122333444443311
Q ss_pred ChhHHHHHHHHHHhCCCCCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 020832 92 DNENLDRVRKIYELFPQIPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLY 171 (321)
Q Consensus 92 ~~~~~~rl~~l~~~~p~~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~ 171 (321)
++.+.-+.+.++..|.... -+..+-..... ..=.+.|+.+-.+.-...-.++..+..+|..++
T Consensus 91 -~~A~~~~~~a~~~~~~~~~--------~~~~l~~~~~~--------~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~ 153 (272)
T 3u4t_A 91 -SLAIQQYQAAVDRDTTRLD--------MYGQIGSYFYN--------KGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYY 153 (272)
T ss_dssp -HHHHHHHHHHHHHSTTCTH--------HHHHHHHHHHH--------TTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHhcCcccHH--------HHHHHHHHHHH--------ccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 2334444444444332210 01111000000 111233444444332223468899999995555
Q ss_pred hcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCC---hhHHHHHHHHHHHHhhhhccC
Q 020832 172 SESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGN---MKDANYIMDEVKKQVENKQLQ 248 (321)
Q Consensus 172 ~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n---~~~A~~~~~~f~~~~~~~~~~ 248 (321)
..+ ++.+|..+|-.+ . +-.|.....+..++.+.. .+++ ...|...+....+.......+
T Consensus 154 ~~~---~~~~A~~~~~~a-------------~-~~~p~~~~~~~~~~~~~~-~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 215 (272)
T 3u4t_A 154 YNK---EYVKADSSFVKV-------------L-ELKPNIYIGYLWRARANA-AQDPDTKQGLAKPYYEKLIEVCAPGGAK 215 (272)
T ss_dssp HTT---CHHHHHHHHHHH-------------H-HHSTTCHHHHHHHHHHHH-HHSTTCSSCTTHHHHHHHHHHHGGGGGG
T ss_pred HHH---HHHHHHHHHHHH-------------H-HhCccchHHHHHHHHHHH-HcCcchhhHHHHHHHHHHHHHHhccccc
Confidence 577 888888766422 1 112333444555554443 3365 666888887777665422111
Q ss_pred CCCChhhhHHHHHHHHhccCChhHHHHHHHHhHHhhhcchhHHHHHHHHHHHh
Q 020832 249 LQPSDLIQFVFYVLQTLERDALPLFNMLRANYKASIEREPAFNEMLDDIAEKF 301 (321)
Q Consensus 249 ~~~~PlLnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l~rd~~~~~~L~~Ig~~y 301 (321)
....+......|-.+... ..-+..-.+.|+..++.+|.-....+.++..-
T Consensus 216 -~~~~~~~~~~~l~~~~~~--~~~~~~A~~~~~~al~~~p~~~~a~~~l~~~~ 265 (272)
T 3u4t_A 216 -YKDELIEANEYIAYYYTI--NRDKVKADAAWKNILALDPTNKKAIDGLKMKL 265 (272)
T ss_dssp -GHHHHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHCTTCHHHHHHHC---
T ss_pred -chHHHHHHHHHHHHHHHH--cCCHHHHHHHHHHHHhcCccHHHHHHHhhhhh
Confidence 011112222222222221 12344566778888888887777777776643
No 115
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=70.60 E-value=29 Score=25.53 Aligned_cols=112 Identities=13% Similarity=0.024 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHHHHHHH
Q 020832 160 PELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYIMDEVK 239 (321)
Q Consensus 160 p~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f~ 239 (321)
++.+...|..+++.+ ++.+|..+|-.+ + +-.|...+.+..++.. |..+++...|...++..+
T Consensus 4 a~~~~~~g~~~~~~~---~~~~A~~~~~~a---------l-----~~~p~~~~~~~~~a~~-~~~~~~~~~A~~~~~~al 65 (126)
T 3upv_A 4 AEEARLEGKEYFTKS---DWPNAVKAYTEM---------I-----KRAPEDARGYSNRAAA-LAKLMSFPEAIADCNKAI 65 (126)
T ss_dssp HHHHHHHHHHHHHTT---CHHHHHHHHHHH---------H-----HHCTTCHHHHHHHHHH-HHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc---CHHHHHHHHHHH---------H-----HhCCCChHHHHHHHHH-HHHhcCHHHHHHHHHHHH
Confidence 466788899999999 999998776321 1 1134555666666654 567899999999887776
Q ss_pred HHhhhhccCCCCChhhhHHHHHHHHhccCChhHHHHHHHHhHHhhhcc------hhHHHHHHHHHHH
Q 020832 240 KQVENKQLQLQPSDLIQFVFYVLQTLERDALPLFNMLRANYKASIERE------PAFNEMLDDIAEK 300 (321)
Q Consensus 240 ~~~~~~~~~~~~~PlLnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l~rd------~~~~~~L~~Ig~~ 300 (321)
+.-|.. ...+.+....+ . ..+ -|..-.+.|+..++.+ |.-......++..
T Consensus 66 ~~~p~~-----~~~~~~lg~~~-~--~~~---~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~ 121 (126)
T 3upv_A 66 EKDPNF-----VRAYIRKATAQ-I--AVK---EYASALETLDAARTKDAEVNNGSSAREIDQLYYKA 121 (126)
T ss_dssp HHCTTC-----HHHHHHHHHHH-H--HTT---CHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHH
T ss_pred HhCCCc-----HHHHHHHHHHH-H--HHh---CHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHH
Confidence 643211 11222222211 1 122 2444556666666666 6666666666554
No 116
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=70.07 E-value=24 Score=35.55 Aligned_cols=84 Identities=21% Similarity=0.071 Sum_probs=49.6
Q ss_pred hHHHHHHH--HHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHH
Q 020832 139 SSFLKAAI--KWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVA 216 (321)
Q Consensus 139 ~~fl~~ai--~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~ 216 (321)
...+++|+ .|..... ..-.+++.+..+|..|...+ ++.+|..+|-.. + +..|...+.+..
T Consensus 411 ~~~~~~al~~~~~~~~~-~~p~~~~~~~~~a~~~~~~g---~~~~A~~~~~~a---------l-----~~~p~~~~a~~~ 472 (681)
T 2pzi_A 411 LDSLRAARHGALDADGV-DFSESVELPLMEVRALLDLG---DVAKATRKLDDL---------A-----ERVGWRWRLVWY 472 (681)
T ss_dssp HHHHHHHHTC--------CCTTCSHHHHHHHHHHHHHT---CHHHHHHHHHHH---------H-----HHHCCCHHHHHH
T ss_pred HHHHHHhhhhccccccc-ccccchhHHHHHHHHHHhcC---CHHHHHHHHHHH---------h-----ccCcchHHHHHH
Confidence 45566665 2322211 11357789999999999999 999998766321 1 112344555666
Q ss_pred HHHHHHHhcCChhHHHHHHHHHHHH
Q 020832 217 RAILMYLSLGNMKDANYIMDEVKKQ 241 (321)
Q Consensus 217 RaVL~~L~l~n~~~A~~~~~~f~~~ 241 (321)
++.+ |+..++...|...|+...+.
T Consensus 473 lg~~-~~~~g~~~~A~~~~~~al~l 496 (681)
T 2pzi_A 473 RAVA-ELLTGDYDSATKHFTEVLDT 496 (681)
T ss_dssp HHHH-HHHHTCHHHHHHHHHHHHHH
T ss_pred HHHH-HHHcCCHHHHHHHHHHHHHh
Confidence 6654 45667777777776665543
No 117
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=69.86 E-value=28 Score=32.31 Aligned_cols=111 Identities=8% Similarity=-0.070 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHhCCCCCC
Q 020832 32 GAQQMYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAYDNENLDRVRKIYELFPQIPV 111 (321)
Q Consensus 32 EAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~~~~~~rl~~l~~~~p~~~~ 111 (321)
+.-+.++.+.+.|.++++|++|++.+.+....+-+.. .+.. .+-..+ ..+.+.....++..++....
T Consensus 221 ~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~-----~~~~---~~~~~~-~~~~~~~~~~nla~~~~~~g---- 287 (370)
T 1ihg_A 221 LISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSR-----AAAE---DADGAK-LQPVALSCVLNIGACKLKMS---- 287 (370)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH-----HHSC---HHHHGG-GHHHHHHHHHHHHHHHHHTT----
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCc-----cccC---hHHHHH-HHHHHHHHHHHHHHHHHhcc----
Confidence 3445688888999999999999998776665432211 0000 000000 00111122233444433211
Q ss_pred CCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhh
Q 020832 112 PHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFV 187 (321)
Q Consensus 112 ~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl 187 (321)
+ .+|| ....++|++-. -.++..|..+|.+|...+ ++.+|..+|-
T Consensus 288 -~----------~~~A-----------~~~~~~al~~~-------p~~~~a~~~lg~~~~~~g---~~~eA~~~l~ 331 (370)
T 1ihg_A 288 -D----------WQGA-----------VDSCLEALEID-------PSNTKALYRRAQGWQGLK---EYDQALADLK 331 (370)
T ss_dssp -C----------HHHH-----------HHHHHHHHTTC-------TTCHHHHHHHHHHHHHTT---CHHHHHHHHH
T ss_pred -C----------HHHH-----------HHHHHHHHHhC-------chhHHHHHHHHHHHHHcc---CHHHHHHHHH
Confidence 0 1222 45566666522 247899999999999999 9999987765
No 118
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=68.70 E-value=63 Score=28.61 Aligned_cols=134 Identities=13% Similarity=-0.026 Sum_probs=79.0
Q ss_pred HhccCChhHHHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCCChh-HHHHHHHH
Q 020832 24 IVNEGNFYGAQQMYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAYDNE-NLDRVRKI 102 (321)
Q Consensus 24 ~i~~G~~YEAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~~~-~~~rl~~l 102 (321)
.+..|++=+|...++...... .......-...+..-+..+...|++..+.++....++.....+.+.... ....+..+
T Consensus 24 ~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~ 102 (373)
T 1hz4_A 24 AINDGNPDEAERLAKLALEEL-PPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEI 102 (373)
T ss_dssp HHHTTCHHHHHHHHHHHHHTC-CTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHcC-CCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 456778878887777665544 2222222233444445566677888777777777666666654332211 12233333
Q ss_pred HHhCCCCCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCC-CCCCHHHHHHHHHHHHhcCCCCChHH
Q 020832 103 YELFPQIPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAP-KTGSPELHVMLAEYLYSESPELDMAR 181 (321)
Q Consensus 103 ~~~~p~~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~-~~Gdp~LH~~la~~~~~e~~~~~~~~ 181 (321)
..... + ..++ .....+++......+.. ..+....+..+|.+++..| ++.+
T Consensus 103 ~~~~G-----~----------~~~A-----------~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g---~~~~ 153 (373)
T 1hz4_A 103 LFAQG-----F----------LQTA-----------WETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWA---RLDE 153 (373)
T ss_dssp HHHTT-----C----------HHHH-----------HHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTT---CHHH
T ss_pred HHHCC-----C----------HHHH-----------HHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhc---CHHH
Confidence 32211 0 1222 56777888877665432 1234567888999999999 9999
Q ss_pred HhhHhh
Q 020832 182 VSFHFV 187 (321)
Q Consensus 182 A~~Hfl 187 (321)
|+.++-
T Consensus 154 A~~~~~ 159 (373)
T 1hz4_A 154 AEASAR 159 (373)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998875
No 119
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=68.59 E-value=48 Score=30.65 Aligned_cols=124 Identities=12% Similarity=0.043 Sum_probs=84.5
Q ss_pred HHHhccCChhHHHHHHHHHHHHHhhh----------hCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCC
Q 020832 22 EKIVNEGNFYGAQQMYKSISARYVAA----------QRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAY 91 (321)
Q Consensus 22 ~~~i~~G~~YEAhQ~~RTl~~Ry~~~----------~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~ 91 (321)
......|+|-+|.+.|+....-.-.. +.......+++.-|..+++.|++..|.+.+...++. .|-
T Consensus 231 ~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~-----~p~ 305 (370)
T 1ihg_A 231 NTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEI-----DPS 305 (370)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT-----CTT
T ss_pred HHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh-----Cch
Confidence 44678899999999998877633221 134456678888889999999999988776655542 123
Q ss_pred ChhHHHHHHHHHHhCCCCCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 020832 92 DNENLDRVRKIYELFPQIPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLY 171 (321)
Q Consensus 92 ~~~~~~rl~~l~~~~p~~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~ 171 (321)
+....-++..++..... .+|| .+.+++|++-. -.++..+..++.++.
T Consensus 306 ~~~a~~~lg~~~~~~g~---------------~~eA-----------~~~l~~Al~l~-------P~~~~~~~~l~~~~~ 352 (370)
T 1ihg_A 306 NTKALYRRAQGWQGLKE---------------YDQA-----------LADLKKAQEIA-------PEDKAIQAELLKVKQ 352 (370)
T ss_dssp CHHHHHHHHHHHHHTTC---------------HHHH-----------HHHHHHHHHHC-------TTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHccC---------------HHHH-----------HHHHHHHHHhC-------CCCHHHHHHHHHHHH
Confidence 34555666666654321 2233 55666666543 248899999999999
Q ss_pred hcCCCCChHHHhhHh
Q 020832 172 SESPELDMARVSFHF 186 (321)
Q Consensus 172 ~e~~~~~~~~A~~Hf 186 (321)
..+ ++.+|++..
T Consensus 353 ~~~---~~~~a~k~~ 364 (370)
T 1ihg_A 353 KIK---AQKDKEKAA 364 (370)
T ss_dssp HHH---HHHHHHHCC
T ss_pred HHH---HHHHHHHHH
Confidence 888 888777654
No 120
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=68.31 E-value=50 Score=27.31 Aligned_cols=124 Identities=14% Similarity=0.028 Sum_probs=78.0
Q ss_pred CHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHHHHHH
Q 020832 159 SPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYIMDEV 238 (321)
Q Consensus 159 dp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f 238 (321)
+++.+..+|..+.+.+ ++.+|..+|-.. -+-.|...+.+..++.+ ++..|+...|...++..
T Consensus 4 ~~~~~~~lg~~~~~~g---~~~~A~~~~~~a--------------l~~~p~~~~a~~~lg~~-~~~~g~~~~A~~~~~~a 65 (217)
T 2pl2_A 4 AEQNPLRLGVQLYALG---RYDAALTLFERA--------------LKENPQDPEALYWLART-QLKLGLVNPALENGKTL 65 (217)
T ss_dssp CCHHHHHHHHHHHHTT---CHHHHHHHHHHH--------------HTTSSSCHHHHHHHHHH-HHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcC---CHHHHHHHHHHH--------------HHhCCCCHHHHHHHHHH-HHHcCCHHHHHHHHHHH
Confidence 6778999999999999 999988665321 12234555555555554 46689999999888776
Q ss_pred HHHhhhhccCCCCChhhhHHHHHHHHhccCC------hhHHHHHHHHhHHhhhcchhHHHHHHHHHHHhcCCCC
Q 020832 239 KKQVENKQLQLQPSDLIQFVFYVLQTLERDA------LPLFNMLRANYKASIEREPAFNEMLDDIAEKFFGVKR 306 (321)
Q Consensus 239 ~~~~~~~~~~~~~~PlLnF~~lLl~t~e~~~------~~~F~~L~~~Y~~~l~rd~~~~~~L~~Ig~~yFgi~~ 306 (321)
++.-|.. .....|....+.. ..... ..-+..-.+.|+..++.+|........+|..|+....
T Consensus 66 l~~~P~~-----~~a~~~lg~~~~~-~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~ 133 (217)
T 2pl2_A 66 VARTPRY-----LGGYMVLSEAYVA-LYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGE 133 (217)
T ss_dssp HHHCTTC-----HHHHHHHHHHHHH-HHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHhCCCc-----HHHHHHHHHHHHH-hhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCC
Confidence 6532211 1122333332222 10000 0345566677888888888888888888888886643
No 121
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=68.18 E-value=30 Score=24.73 Aligned_cols=66 Identities=12% Similarity=0.186 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHHHHHHH
Q 020832 160 PELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYIMDEVK 239 (321)
Q Consensus 160 p~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f~ 239 (321)
++.+..+|..++..+ ++.+|..+|-.+-. ..|...+.+...+. .|...++...|...+....
T Consensus 4 ~~~~~~l~~~~~~~~---~~~~A~~~~~~a~~--------------~~~~~~~~~~~la~-~~~~~~~~~~A~~~~~~~~ 65 (131)
T 1elr_A 4 ALKEKELGNDAYKKK---DFDTALKHYDKAKE--------------LDPTNMTYITNQAA-VYFEKGDYNKCRELCEKAI 65 (131)
T ss_dssp HHHHHHHHHHHHHTT---CHHHHHHHHHHHHH--------------HCTTCHHHHHHHHH-HHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc---CHHHHHHHHHHHHh--------------cCCccHHHHHHHHH-HHHHhccHHHHHHHHHHHH
Confidence 466788999999999 99999877642211 12334444444444 4567899999999988877
Q ss_pred HHhh
Q 020832 240 KQVE 243 (321)
Q Consensus 240 ~~~~ 243 (321)
+..+
T Consensus 66 ~~~~ 69 (131)
T 1elr_A 66 EVGR 69 (131)
T ss_dssp HHHH
T ss_pred hhcc
Confidence 7655
No 122
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=68.07 E-value=40 Score=26.13 Aligned_cols=112 Identities=11% Similarity=0.007 Sum_probs=64.7
Q ss_pred hHHHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCC--cchHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHHhCCC
Q 020832 31 YGAQQMYKSISARYVAAQRYSEALDLLHAGACLQLKNNQ--LTCGAELAVSFVEALVKGKVAYDNENLDRVRKIYELFPQ 108 (321)
Q Consensus 31 YEAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q--~~s~~DL~~~lvev~~~~~~~~~~~~~~rl~~l~~~~p~ 108 (321)
.+.-..++...+.+.++++|++|++....+...+-.... .....+. ..+ .|.+......+..++....
T Consensus 8 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~-----~~~----~~~~~~~~~nla~~~~~~~- 77 (162)
T 3rkv_A 8 LKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEW-----VEL----DRKNIPLYANMSQCYLNIG- 77 (162)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHH-----HHH----HHTHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHH-----HHH----HHHHHHHHHHHHHHHHhcC-
Confidence 455567888889999999999999987766554332110 0000000 000 0111122233333332211
Q ss_pred CCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhh
Q 020832 109 IPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFV 187 (321)
Q Consensus 109 ~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl 187 (321)
+ ..++ ....++||+.. -.++..|..+|.+|...| ++.+|..+|-
T Consensus 78 ----~----------~~~A-----------~~~~~~al~~~-------p~~~~a~~~~g~~~~~~g---~~~~A~~~~~ 121 (162)
T 3rkv_A 78 ----D----------LHEA-----------EETSSEVLKRE-------ETNEKALFRRAKARIAAW---KLDEAEEDLK 121 (162)
T ss_dssp ----C----------HHHH-----------HHHHHHHHHHS-------TTCHHHHHHHHHHHHHTT---CHHHHHHHHH
T ss_pred ----c----------HHHH-----------HHHHHHHHhcC-------CcchHHHHHHHHHHHHHh---cHHHHHHHHH
Confidence 0 1222 55566666653 247889999999999999 9999998875
No 123
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=67.99 E-value=25 Score=23.86 Aligned_cols=67 Identities=13% Similarity=0.123 Sum_probs=46.2
Q ss_pred CCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHHHH
Q 020832 157 TGSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYIMD 236 (321)
Q Consensus 157 ~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~ 236 (321)
.+++..+..+|..++..+ ++.+|..+|-.+-. ..|.....+...+. .|...++...|...+.
T Consensus 6 ~~~~~~~~~la~~~~~~~---~~~~A~~~~~~a~~--------------~~~~~~~~~~~l~~-~~~~~~~~~~A~~~~~ 67 (91)
T 1na3_A 6 GNSAEAWYNLGNAYYKQG---DYDEAIEYYQKALE--------------LDPNNAEAWYNLGN-AYYKQGDYDEAIEYYQ 67 (91)
T ss_dssp CHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHH--------------HCTTCHHHHHHHHH-HHHHTTCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcc---CHHHHHHHHHHHHh--------------cCCCCHHHHHHHHH-HHHHHhhHHHHHHHHH
Confidence 346788999999999999 99999987743211 12333444444444 3567899999999887
Q ss_pred HHHHH
Q 020832 237 EVKKQ 241 (321)
Q Consensus 237 ~f~~~ 241 (321)
...+.
T Consensus 68 ~a~~~ 72 (91)
T 1na3_A 68 KALEL 72 (91)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 77664
No 124
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=67.77 E-value=9.9 Score=28.34 Aligned_cols=46 Identities=11% Similarity=0.097 Sum_probs=34.8
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhh
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFV 187 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl 187 (321)
..++..|++............++++..+|.+|++.| ++..|..|+-
T Consensus 25 ~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g---~~~~A~~~~~ 70 (104)
T 2v5f_A 25 ELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQG---DLDKALLLTK 70 (104)
T ss_dssp HHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTT---CHHHHHHHHH
T ss_pred HHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHcc---CHHHHHHHHH
Confidence 667777776654332223567899999999999999 9999988764
No 125
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=67.40 E-value=32 Score=27.74 Aligned_cols=121 Identities=12% Similarity=0.087 Sum_probs=77.5
Q ss_pred HHHhccCChhHHHHHHHHHHHHHhhhhCHHH----------HHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCC
Q 020832 22 EKIVNEGNFYGAQQMYKSISARYVAAQRYSE----------ALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAY 91 (321)
Q Consensus 22 ~~~i~~G~~YEAhQ~~RTl~~Ry~~~~k~~e----------Ai~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~ 91 (321)
...+..|+|-+|.+.|+...........+.. .+.+++.-+..+++.|++..|.+.+...++. .|-
T Consensus 46 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~-----~p~ 120 (198)
T 2fbn_A 46 NEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKI-----DKN 120 (198)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----STT
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-----Ccc
Confidence 4567889999999999988765433221111 2477788888899999999988887776664 223
Q ss_pred ChhHHHHHHHHHHhCCCCCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 020832 92 DNENLDRVRKIYELFPQIPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLY 171 (321)
Q Consensus 92 ~~~~~~rl~~l~~~~p~~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~ 171 (321)
+....-++..++..... .++| ..++.+|++-. -.++..+..++.++.
T Consensus 121 ~~~~~~~lg~~~~~~~~---------------~~~A-----------~~~~~~al~~~-------p~~~~~~~~l~~~~~ 167 (198)
T 2fbn_A 121 NVKALYKLGVANMYFGF---------------LEEA-----------KENLYKAASLN-------PNNLDIRNSYELCVN 167 (198)
T ss_dssp CHHHHHHHHHHHHHHTC---------------HHHH-----------HHHHHHHHHHS-------TTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccc---------------HHHH-----------HHHHHHHHHHC-------CCcHHHHHHHHHHHH
Confidence 34445555555543210 1222 55666676543 247899999999998
Q ss_pred hcCCCCChHHHh
Q 020832 172 SESPELDMARVS 183 (321)
Q Consensus 172 ~e~~~~~~~~A~ 183 (321)
..+ +..++.
T Consensus 168 ~~~---~~~~~~ 176 (198)
T 2fbn_A 168 KLK---EARKKD 176 (198)
T ss_dssp HHH---HHHC--
T ss_pred HHH---HHHHHH
Confidence 776 555554
No 126
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=67.32 E-value=35 Score=25.14 Aligned_cols=66 Identities=14% Similarity=0.039 Sum_probs=45.8
Q ss_pred CCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHHHHH
Q 020832 158 GSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYIMDE 237 (321)
Q Consensus 158 Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~ 237 (321)
-++..+..+|..+++.+ ++.+|..+|-.+-. -.|...+.+..++.+ +...++...|...+..
T Consensus 7 ~~~~~~~~~g~~~~~~~---~~~~A~~~~~~al~--------------~~~~~~~~~~~l~~~-~~~~~~~~~A~~~~~~ 68 (137)
T 3q49_B 7 PSAQELKEQGNRLFVGR---KYPEAAACYGRAIT--------------RNPLVAVYYTNRALC-YLKMQQPEQALADCRR 68 (137)
T ss_dssp CCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHH--------------HCTTCHHHHHHHHHH-HHHTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhC---cHHHHHHHHHHHHh--------------hCcCcHHHHHHHHHH-HHHhcCHHHHHHHHHH
Confidence 46889999999999999 99999876642111 123344555555544 5678888888888777
Q ss_pred HHHH
Q 020832 238 VKKQ 241 (321)
Q Consensus 238 f~~~ 241 (321)
..+.
T Consensus 69 al~~ 72 (137)
T 3q49_B 69 ALEL 72 (137)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6654
No 127
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=67.08 E-value=25 Score=25.85 Aligned_cols=82 Identities=15% Similarity=0.259 Sum_probs=55.7
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHH
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARA 218 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~Ra 218 (321)
..+.++|++-... + -.++..+..+|.+|+..+ ++.+|..+|-.+ + +-.|...+.+...+
T Consensus 10 ~~~~~~al~~~~~--~--p~~~~~~~~lg~~~~~~~---~~~~A~~~~~~a---------l-----~~~p~~~~~~~~l~ 68 (117)
T 3k9i_A 10 VPYYEKAIASGLQ--G--KDLAECYLGLGSTFRTLG---EYRKAEAVLANG---------V-----KQFPNHQALRVFYA 68 (117)
T ss_dssp HHHHHHHHSSCCC--H--HHHHHHHHHHHHHHHHTT---CHHHHHHHHHHH---------H-----HHCTTCHHHHHHHH
T ss_pred HHHHHHHHHcCCC--C--ccHHHHHHHHHHHHHHcC---CHHHHHHHHHHH---------H-----HhCCCchHHHHHHH
Confidence 5677777763100 0 135688999999999999 999999777421 1 11344455555555
Q ss_pred HHHHHhcCChhHHHHHHHHHHHHh
Q 020832 219 ILMYLSLGNMKDANYIMDEVKKQV 242 (321)
Q Consensus 219 VL~~L~l~n~~~A~~~~~~f~~~~ 242 (321)
. .+...|+...|...+....+..
T Consensus 69 ~-~~~~~g~~~~A~~~~~~al~~~ 91 (117)
T 3k9i_A 69 M-VLYNLGRYEQGVELLLKIIAET 91 (117)
T ss_dssp H-HHHHHTCHHHHHHHHHHHHHHH
T ss_pred H-HHHHcCCHHHHHHHHHHHHHhC
Confidence 4 4677899999999888877644
No 128
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=66.81 E-value=44 Score=26.16 Aligned_cols=103 Identities=14% Similarity=0.021 Sum_probs=63.9
Q ss_pred CCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHHHHH
Q 020832 158 GSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYIMDE 237 (321)
Q Consensus 158 Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~ 237 (321)
.++..+..+|..+...+ ++..|..++-.+ .+..|...+.+..++.+ |...|+...|...|+.
T Consensus 71 ~~~~~~~~~~~~~~~~~---~~~~a~~~~~~a--------------~~~~~~~~~~~~~lg~~-~~~~g~~~~A~~~~~~ 132 (184)
T 3vtx_A 71 TSAEAYYILGSANFMID---EKQAAIDALQRA--------------IALNTVYADAYYKLGLV-YDSMGEHDKAIEAYEK 132 (184)
T ss_dssp CCHHHHHHHHHHHHHTT---CHHHHHHHHHHH--------------HHHCTTCHHHHHHHHHH-HHHTTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcC---CHHHHHHHHHHH--------------HHhCccchHHHHHHHHH-HHHhCCchhHHHHHHH
Confidence 47888999999999999 888877554321 12234555555555554 5778999999998887
Q ss_pred HHHHhhhhccCCCCChh-hhHHHHHHHHhccCChhHHHHHHHHhHHhhhcchhH
Q 020832 238 VKKQVENKQLQLQPSDL-IQFVFYVLQTLERDALPLFNMLRANYKASIEREPAF 290 (321)
Q Consensus 238 f~~~~~~~~~~~~~~Pl-LnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l~rd~~~ 290 (321)
..+..| ..|. .+-+..+.. ..+ -|..-.+.|+..|+.||.-
T Consensus 133 ~l~~~p-------~~~~~~~~lg~~~~--~~g---~~~~A~~~~~~al~~~p~~ 174 (184)
T 3vtx_A 133 TISIKP-------GFIRAYQSIGLAYE--GKG---LRDEAVKYFKKALEKEEKK 174 (184)
T ss_dssp HHHHCT-------TCHHHHHHHHHHHH--HTT---CHHHHHHHHHHHHHTTHHH
T ss_pred HHHhcc-------hhhhHHHHHHHHHH--HCC---CHHHHHHHHHHHHhCCccC
Confidence 776432 2222 221222221 122 3455667788888888764
No 129
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=65.46 E-value=55 Score=26.80 Aligned_cols=128 Identities=13% Similarity=0.029 Sum_probs=70.3
Q ss_pred CHHHHHHHHHHHHhcCCCCChHHHhhHhhc--CCChHHHHHHHHHHhhccCCCh--hHHHHHHHHHHHHhcCChhHHHHH
Q 020832 159 SPELHVMLAEYLYSESPELDMARVSFHFVR--GNNPEKFASTIVNFMGKCYPGE--DDLAVARAILMYLSLGNMKDANYI 234 (321)
Q Consensus 159 dp~LH~~la~~~~~e~~~~~~~~A~~Hfl~--~~~~~~~a~~L~ew~~~~~~~e--~dlfi~RaVL~~L~l~n~~~A~~~ 234 (321)
+++-...-|..+++.| ++.+|..+|-. ..+|+. ++. +-|.......+ ..+...++ ..|...|+...|...
T Consensus 3 ~~~~~~~~g~~~~~~g---~~~~A~~~~~~al~~~p~~-~~~-~~~~~~~~~~~~~~~~~~~lg-~~~~~~g~~~~A~~~ 76 (208)
T 3urz_A 3 SVDEMLQKVSAAIEAG---QNGQAVSYFRQTIALNIDR-TEM-YYWTNVDKNSEISSKLATELA-LAYKKNRNYDKAYLF 76 (208)
T ss_dssp CHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHCHHH-HHH-HHHHHSCTTSHHHHHHHHHHH-HHHHHTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHhCCCC-hHH-HHHhhhcchhhhhHHHHHHHH-HHHHHCCCHHHHHHH
Confidence 3445566778888889 99999888864 334441 111 22211111111 12222233 345667888888888
Q ss_pred HHHHHHHhhhhccCCCCChhhhHHHHHHHHhccCChhHHHHHHHHhHHhhhcchhHHHHHHHHHHHhcC
Q 020832 235 MDEVKKQVENKQLQLQPSDLIQFVFYVLQTLERDALPLFNMLRANYKASIEREPAFNEMLDDIAEKFFG 303 (321)
Q Consensus 235 ~~~f~~~~~~~~~~~~~~PlLnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l~rd~~~~~~L~~Ig~~yFg 303 (321)
|....+..|.. ...+.+....+.. .+ -+..-.+.|+..++.+|........+|..||.
T Consensus 77 ~~~al~~~p~~-----~~~~~~lg~~~~~---~g---~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~ 134 (208)
T 3urz_A 77 YKELLQKAPNN-----VDCLEACAEMQVC---RG---QEKDALRMYEKILQLEADNLAANIFLGNYYYL 134 (208)
T ss_dssp HHHHHHHCTTC-----HHHHHHHHHHHHH---HT---CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCC-----HHHHHHHHHHHHH---cC---CHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 87776643211 1122222222221 12 24445677777777788877777777777763
No 130
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=64.12 E-value=69 Score=30.13 Aligned_cols=29 Identities=14% Similarity=0.203 Sum_probs=22.0
Q ss_pred hHHHHHHHHhHHhhhcchhHHHHHHHHHHHhc
Q 020832 271 PLFNMLRANYKASIEREPAFNEMLDDIAEKFF 302 (321)
Q Consensus 271 ~~F~~L~~~Y~~~l~rd~~~~~~L~~Ig~~yF 302 (321)
.-+..-.+.|+... |........+|.+|+
T Consensus 231 ~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~ 259 (452)
T 3e4b_A 231 PDEKTAQALLEKIA---PGYPASWVSLAQLLY 259 (452)
T ss_dssp CCHHHHHHHHHHHG---GGSTHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHc---CCCHHHHHHHHHHHH
Confidence 56677778888877 677778888999854
No 131
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=63.37 E-value=63 Score=26.71 Aligned_cols=70 Identities=9% Similarity=0.054 Sum_probs=44.5
Q ss_pred CHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHHHHHH
Q 020832 159 SPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYIMDEV 238 (321)
Q Consensus 159 dp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f 238 (321)
+|+-+...|..+++.| ++.+|..+|-- ++-.. ...+...+.+..++ ..|...++...|...|+.+
T Consensus 3 ~~~~~~~~a~~~~~~g---~~~~A~~~~~~---------~~~~~--p~~~~~~~a~~~lg-~~~~~~~~~~~A~~~~~~~ 67 (225)
T 2yhc_A 3 PPNEIYATAQQKLQDG---NWRQAITQLEA---------LDNRY--PFGPYSQQVQLDLI-YAYYKNADLPLAQAAIDRF 67 (225)
T ss_dssp CHHHHHHHHHHHHHHT---CHHHHHHHHHH---------HHHHC--TTSTTHHHHHHHHH-HHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcC---CHHHHHHHHHH---------HHHhC--CCChHHHHHHHHHH-HHHHhcCCHHHHHHHHHHH
Confidence 3566777888999999 99988866532 11110 00111123333333 4567789999999999999
Q ss_pred HHHhh
Q 020832 239 KKQVE 243 (321)
Q Consensus 239 ~~~~~ 243 (321)
.+..|
T Consensus 68 l~~~P 72 (225)
T 2yhc_A 68 IRLNP 72 (225)
T ss_dssp HHHCT
T ss_pred HHHCc
Confidence 87654
No 132
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=62.99 E-value=39 Score=24.43 Aligned_cols=68 Identities=9% Similarity=-0.062 Sum_probs=47.3
Q ss_pred CCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHHHHH
Q 020832 158 GSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYIMDE 237 (321)
Q Consensus 158 Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~ 237 (321)
.++..+..+|.+|+..+ ++.+|..+|-..- +..|...+.+...+. .|...|+...|...+..
T Consensus 17 ~~~~~~~~lg~~~~~~g---~~~~A~~~~~~al--------------~~~p~~~~~~~~la~-~~~~~g~~~~A~~~~~~ 78 (115)
T 2kat_A 17 DNMLLRFTLGKTYAEHE---QFDAALPHLRAAL--------------DFDPTYSVAWKWLGK-TLQGQGDRAGARQAWES 78 (115)
T ss_dssp CCHHHHHHHHHHHHHTT---CHHHHHHHHHHHH--------------HHCTTCHHHHHHHHH-HHHHHTCHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcc---CHHHHHHHHHHHH--------------HHCCCcHHHHHHHHH-HHHHcCCHHHHHHHHHH
Confidence 57899999999999999 9999987764211 112333444444443 35668999999998887
Q ss_pred HHHHhh
Q 020832 238 VKKQVE 243 (321)
Q Consensus 238 f~~~~~ 243 (321)
..+..+
T Consensus 79 al~~~~ 84 (115)
T 2kat_A 79 GLAAAQ 84 (115)
T ss_dssp HHHHHH
T ss_pred HHHhcc
Confidence 776544
No 133
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=62.68 E-value=57 Score=26.02 Aligned_cols=26 Identities=8% Similarity=0.032 Sum_probs=23.0
Q ss_pred CHHHHHHHHHHHHhcCCCCChHHHhhHhh
Q 020832 159 SPELHVMLAEYLYSESPELDMARVSFHFV 187 (321)
Q Consensus 159 dp~LH~~la~~~~~e~~~~~~~~A~~Hfl 187 (321)
++..+..+|.+|++.+ ++.+|..+|-
T Consensus 120 ~~~~~~~l~~~~~~~g---~~~~A~~~~~ 145 (213)
T 1hh8_A 120 ACEVLYNIAFMYAKKE---EWKKAEEQLA 145 (213)
T ss_dssp HHHHHHHHHHHHHHTT---CHHHHHHHHH
T ss_pred chHHHHHHHHHHHHcc---CHHHHHHHHH
Confidence 4589999999999999 9999987765
No 134
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=62.38 E-value=1.2e+02 Score=30.32 Aligned_cols=29 Identities=17% Similarity=-0.028 Sum_probs=25.1
Q ss_pred CCHHHHHHHHHHHHhcCCCCChHHHhhHhhcC
Q 020832 158 GSPELHVMLAEYLYSESPELDMARVSFHFVRG 189 (321)
Q Consensus 158 Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~ 189 (321)
.++..|..+|.+|.+.| ++.+|..+|-..
T Consensus 532 ~~~~a~~~lg~~~~~~g---~~~~A~~~~~~a 560 (681)
T 2pzi_A 532 GVISAAFGLARARSAEG---DRVGAVRTLDEV 560 (681)
T ss_dssp TCHHHHHHHHHHHHHTT---CHHHHHHHHHTS
T ss_pred chHHHHHHHHHHHHHcC---CHHHHHHHHHhh
Confidence 47889999999999999 999999888653
No 135
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=62.03 E-value=87 Score=30.01 Aligned_cols=39 Identities=10% Similarity=0.054 Sum_probs=27.8
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhc---CCCCChHHHhhHhh
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSE---SPELDMARVSFHFV 187 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e---~~~~~~~~A~~Hfl 187 (321)
...+++|++-. -.++..+..+|.++... + ++.+|..++-
T Consensus 111 ~~~~~~al~~~-------p~~~~~~~~l~~~~~~~~~~g---~~~~A~~~~~ 152 (568)
T 2vsy_A 111 AAAYTRAHQLL-------PEEPYITAQLLNWRRRLCDWR---ALDVLSAQVR 152 (568)
T ss_dssp HHHHHHHHHHC-------TTCHHHHHHHHHHHHHTTCCT---THHHHHHHHH
T ss_pred HHHHHHHHHhC-------CCCHHHHHHHHHHHHHhhccc---cHHHHHHHHH
Confidence 45556665432 24788899999999988 7 8888876654
No 136
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=61.99 E-value=53 Score=25.39 Aligned_cols=29 Identities=10% Similarity=0.123 Sum_probs=24.0
Q ss_pred CCCHHHHHHHHHHHHh----cCCCCChHHHhhHhhc
Q 020832 157 TGSPELHVMLAEYLYS----ESPELDMARVSFHFVR 188 (321)
Q Consensus 157 ~Gdp~LH~~la~~~~~----e~~~~~~~~A~~Hfl~ 188 (321)
.|+|.-+..+|.+|.+ .+ ++.+|..+|-.
T Consensus 90 ~g~~~a~~~Lg~~y~~G~g~~~---d~~~A~~~~~~ 122 (138)
T 1klx_A 90 LNDQDGCLILGYKQYAGKGVVK---NEKQAVKTFEK 122 (138)
T ss_dssp TTCHHHHHHHHHHHHHTSSSCC---CHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCCCCc---CHHHHHHHHHH
Confidence 4889999999999988 66 88888887765
No 137
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=61.58 E-value=39 Score=23.74 Aligned_cols=39 Identities=13% Similarity=0.210 Sum_probs=28.6
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhh
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFV 187 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl 187 (321)
.++++++++-. -.++..+..+|.++...+ ++.+|..+|-
T Consensus 63 ~~~~~~~~~~~-------~~~~~~~~~la~~~~~~~---~~~~A~~~~~ 101 (125)
T 1na0_A 63 IEYYQKALELD-------PNNAEAWYNLGNAYYKQG---DYDEAIEYYQ 101 (125)
T ss_dssp HHHHHHHHHHC-------TTCHHHHHHHHHHHHHTT---CHHHHHHHHH
T ss_pred HHHHHHHHHhC-------CccHHHHHHHHHHHHHhc---CHHHHHHHHH
Confidence 45555555421 246888999999999999 9999887764
No 138
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=60.34 E-value=40 Score=23.47 Aligned_cols=112 Identities=9% Similarity=0.009 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHHHHHHH
Q 020832 160 PELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYIMDEVK 239 (321)
Q Consensus 160 p~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f~ 239 (321)
++.+..+|..++..+ ++.+|..+|-..- . ..|...+.+...+. .+...++...|...+....
T Consensus 4 ~~~~~~~~~~~~~~~---~~~~A~~~~~~~~-------------~-~~~~~~~~~~~~a~-~~~~~~~~~~A~~~~~~~~ 65 (118)
T 1elw_A 4 VNELKEKGNKALSVG---NIDDALQCYSEAI-------------K-LDPHNHVLYSNRSA-AYAKKGDYQKAYEDGCKTV 65 (118)
T ss_dssp HHHHHHHHHHHHHTT---CHHHHHHHHHHHH-------------H-HCTTCHHHHHHHHH-HHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcc---cHHHHHHHHHHHH-------------H-HCCCcHHHHHHHHH-HHHhhccHHHHHHHHHHHH
Confidence 567788899999999 9999887664221 1 12344454554444 4567899999998887776
Q ss_pred HHhhhhccCCCCChhhhHHHHHHHHhccCChhHHHHHHHHhHHhhhcchhHHHHHHHHHHH
Q 020832 240 KQVENKQLQLQPSDLIQFVFYVLQTLERDALPLFNMLRANYKASIEREPAFNEMLDDIAEK 300 (321)
Q Consensus 240 ~~~~~~~~~~~~~PlLnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l~rd~~~~~~L~~Ig~~ 300 (321)
+..+. ....+.+....+ ...+ -+..-.+.|+..++.+|........++.+
T Consensus 66 ~~~~~-----~~~~~~~~a~~~---~~~~---~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 115 (118)
T 1elw_A 66 DLKPD-----WGKGYSRKAAAL---EFLN---RFEEAKRTYEEGLKHEANNPQLKEGLQNM 115 (118)
T ss_dssp HHCTT-----CHHHHHHHHHHH---HHTT---CHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred HhCcc-----cHHHHHHHHHHH---HHHh---hHHHHHHHHHHHHHcCCCCHHHHHHHHHh
Confidence 54321 011222222221 1222 34445567777777777766666666654
No 139
>3ubc_A Hemoglobin-like flavoprotein; oxygen-bound, autoxidation, nanotemplate, langmuir-blodgett, films, oxygen transport; HET: HEM; 1.65A {Methylacidiphilum infernorum V4} PDB: 3ubv_A* 3s1i_A* 3s1j_A*
Probab=60.14 E-value=29 Score=27.09 Aligned_cols=86 Identities=9% Similarity=0.138 Sum_probs=57.4
Q ss_pred hhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHhhhhccCCCCChhhhHHHHHHHHhccCChhHHHHHHHHhHHhhhcchh
Q 020832 210 EDDLAVARAILMYLSLGNMKDANYIMDEVKKQVENKQLQLQPSDLIQFVFYVLQTLERDALPLFNMLRANYKASIEREPA 289 (321)
Q Consensus 210 e~dlfi~RaVL~~L~l~n~~~A~~~~~~f~~~~~~~~~~~~~~PlLnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l~rd~~ 289 (321)
+.+.-+.|....-+.-.....+..+|..+.+.+|.....|+. ++ ......++.. ...+-..|+.-+.
T Consensus 3 ~~~~~~i~~sw~~v~~~~~~~g~~fy~rlf~~~P~~k~~F~~----d~--------~~h~~~l~~a-l~~~v~~ld~~~~ 69 (131)
T 3ubc_A 3 QKEKELIKESWKRIEPNKNEIGLLFYANLFKEEPTVSVLFQN----PI--------SSQSRKLMQV-LGILVQGIDNLEG 69 (131)
T ss_dssp HHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHCGGGGGGCCS----CH--------HHHHHHHHHH-HHHHHHTGGGGGG
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhChHHHHHccc----cH--------HHHHHHHHHH-HHHHHHhCCChHH
Confidence 445567777777777666678888888888888877665553 21 1111223333 3556667766678
Q ss_pred HHHHHHHHHHHh--cCCCCCC
Q 020832 290 FNEMLDDIAEKF--FGVKRRN 308 (321)
Q Consensus 290 ~~~~L~~Ig~~y--Fgi~~~~ 308 (321)
+..+|.+||..+ +||.|.+
T Consensus 70 l~~~l~~L~~~H~~~gV~p~~ 90 (131)
T 3ubc_A 70 LIPTLQDLGRRHKQYGVVDSH 90 (131)
T ss_dssp GHHHHHHHHHHHHHTTCCTTH
T ss_pred HHHHHHHHHHHHHHcCCCHHH
Confidence 889999999987 7777753
No 140
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=59.80 E-value=41 Score=23.41 Aligned_cols=27 Identities=7% Similarity=-0.202 Sum_probs=23.9
Q ss_pred CCHHHHHHHHHHHHhcCCCCChHHHhhHhh
Q 020832 158 GSPELHVMLAEYLYSESPELDMARVSFHFV 187 (321)
Q Consensus 158 Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl 187 (321)
.++..+..+|.++...+ ++.+|..+|-
T Consensus 70 ~~~~~~~~~a~~~~~~~---~~~~A~~~~~ 96 (118)
T 1elw_A 70 DWGKGYSRKAAALEFLN---RFEEAKRTYE 96 (118)
T ss_dssp TCHHHHHHHHHHHHHTT---CHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHh---hHHHHHHHHH
Confidence 47889999999999999 9999998775
No 141
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=58.21 E-value=64 Score=25.12 Aligned_cols=79 Identities=15% Similarity=0.216 Sum_probs=55.3
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHH
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARA 218 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~Ra 218 (321)
...++++++=. -.++..+..+|.+|...+ ++.+|..+|-.+- +-.|...+.+...+
T Consensus 30 ~~~~~~al~~~-------p~~~~~~~~lg~~~~~~~---~~~~A~~~~~~al--------------~~~p~~~~~~~~la 85 (177)
T 2e2e_A 30 LQALQDKIRAN-------PQNSEQWALLGEYYLWQN---DYSNSLLAYRQAL--------------QLRGENAELYAALA 85 (177)
T ss_dssp CHHHHHHHHHC-------CSCHHHHHHHHHHHHHTT---CHHHHHHHHHHHH--------------HHHCSCHHHHHHHH
T ss_pred HHHHHHHHHhC-------CCcHHHHHHHHHHHHHcC---CHHHHHHHHHHHH--------------HcCCCCHHHHHHHH
Confidence 55666666521 247899999999999999 9999987663211 11234456667777
Q ss_pred HHHHHhcCCh--hHHHHHHHHHHHH
Q 020832 219 ILMYLSLGNM--KDANYIMDEVKKQ 241 (321)
Q Consensus 219 VL~~L~l~n~--~~A~~~~~~f~~~ 241 (321)
.+.|...++. ..|...+....+.
T Consensus 86 ~~l~~~~~~~~~~~A~~~~~~al~~ 110 (177)
T 2e2e_A 86 TVLYYQASQHMTAQTRAMIDKALAL 110 (177)
T ss_dssp HHHHHHTTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHhcCCcchHHHHHHHHHHHHh
Confidence 7767778887 8898888776654
No 142
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=58.01 E-value=78 Score=26.06 Aligned_cols=141 Identities=15% Similarity=0.082 Sum_probs=73.5
Q ss_pred HHHHHHHhccCChhHHHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCCChh-HH
Q 020832 18 IDKLEKIVNEGNFYGAQQMYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAYDNE-NL 96 (321)
Q Consensus 18 l~rl~~~i~~G~~YEAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~~~-~~ 96 (321)
+.-+++..+.|+. +|+-. +..-|...+++++|++.+...+ +.|...+-..|+.++ ...+++.+.+ .+
T Consensus 6 ~~~~~~aa~~g~~-~a~~~---lg~~~~~~~~~~~A~~~~~~a~----~~g~~~a~~~lg~~y----~~~g~~~~~~~A~ 73 (212)
T 3rjv_A 6 GSQYQQQAEAGDR-RAQYY---LADTWVSSGDYQKAEYWAQKAA----AQGDGDALALLAQLK----IRNPQQADYPQAR 73 (212)
T ss_dssp THHHHHHHHTTCH-HHHHH---HHHHHHHHTCHHHHHHHHHHHH----HTTCHHHHHHHHHHT----TSSTTSCCHHHHH
T ss_pred HHHHHHHHHCCCH-HHHHH---HHHHHhcCCCHHHHHHHHHHHH----HcCCHHHHHHHHHHH----HcCCCCCCHHHHH
Confidence 4456677777753 44333 3333444899999999999876 446655555555544 3445555532 22
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCC----HHHHHHHHHHHHh
Q 020832 97 DRVRKIYELFPQIPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGS----PELHVMLAEYLYS 172 (321)
Q Consensus 97 ~rl~~l~~~~p~~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gd----p~LH~~la~~~~~ 172 (321)
.-+....+ +..+ +-.. .++..-....+..+=...|+.|-.+.- ..|+ |.-+..+|.+|..
T Consensus 74 ~~~~~A~~---~g~~-------~a~~----~Lg~~y~~g~g~~~d~~~A~~~~~~A~--~~~~~~~~~~a~~~Lg~~y~~ 137 (212)
T 3rjv_A 74 QLAEKAVE---AGSK-------SGEI----VLARVLVNRQAGATDVAHAITLLQDAA--RDSESDAAVDAQMLLGLIYAS 137 (212)
T ss_dssp HHHHHHHH---TTCH-------HHHH----HHHHHHTCGGGSSCCHHHHHHHHHHHT--SSTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH---CCCH-------HHHH----HHHHHHHcCCCCccCHHHHHHHHHHHH--HcCCCcchHHHHHHHHHHHHc
Confidence 22222211 0110 0000 000000000000111355666766553 3566 8888899999888
Q ss_pred ----cCCCCChHHHhhHhhcC
Q 020832 173 ----ESPELDMARVSFHFVRG 189 (321)
Q Consensus 173 ----e~~~~~~~~A~~Hfl~~ 189 (321)
.+ ++.+|..+|-.+
T Consensus 138 g~g~~~---d~~~A~~~~~~A 155 (212)
T 3rjv_A 138 GVHGPE---DDVKASEYFKGS 155 (212)
T ss_dssp TSSSSC---CHHHHHHHHHHH
T ss_pred CCCCCC---CHHHHHHHHHHH
Confidence 55 788888777653
No 143
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=57.61 E-value=58 Score=24.47 Aligned_cols=81 Identities=9% Similarity=-0.104 Sum_probs=49.0
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHH-HHH
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLA-VAR 217 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlf-i~R 217 (321)
...++++++-. -.++..+..+|.++...+ ++.+|..+|-.+- . ..|...+.+ ...
T Consensus 67 ~~~~~~a~~~~-------~~~~~~~~~~a~~~~~~~---~~~~A~~~~~~a~-------------~-~~p~~~~~~~~~~ 122 (166)
T 1a17_A 67 LGDATRAIELD-------KKYIKGYYRRAASNMALG---KFRAALRDYETVV-------------K-VKPHDKDAKMKYQ 122 (166)
T ss_dssp HHHHHHHHHHC-------TTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHH-------------H-HSTTCHHHHHHHH
T ss_pred HHHHHHHHHhC-------cccHHHHHHHHHHHHHhc---cHHHHHHHHHHHH-------------H-hCCCCHHHHHHHH
Confidence 44555555432 247889999999999999 9999987664211 1 112222222 122
Q ss_pred HHHHHHhcCChhHHHHHHHHHHHHhh
Q 020832 218 AILMYLSLGNMKDANYIMDEVKKQVE 243 (321)
Q Consensus 218 aVL~~L~l~n~~~A~~~~~~f~~~~~ 243 (321)
....++..++...|...+........
T Consensus 123 ~~~~~~~~~~~~~A~~~~~~~~~~~~ 148 (166)
T 1a17_A 123 ECNKIVKQKAFERAIAGDEHKRSVVD 148 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccchHHHhc
Confidence 22334567888888888776665544
No 144
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=57.40 E-value=16 Score=28.24 Aligned_cols=35 Identities=23% Similarity=0.240 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHC
Q 020832 32 GAQQMYKSISARYVAAQRYSEALDLLHAGACLQLKN 67 (321)
Q Consensus 32 EAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~ 67 (321)
-||+.-| .+-|+++.++|+|||+-..+.|..|-++
T Consensus 14 ~AH~~~R-rAe~ll~~gkydeAIech~kAa~yL~eA 48 (97)
T 2crb_A 14 LAHQQSR-RADRLLAAGKYEEAISCHRKATTYLSEA 48 (97)
T ss_dssp HHHHHHH-HHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred hhhHhhh-HHHHHHhcCCHHHHHHHHHHHHHHHHHH
Confidence 3888777 5889999999999999988887666544
No 145
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=56.93 E-value=87 Score=26.26 Aligned_cols=17 Identities=24% Similarity=-0.066 Sum_probs=11.9
Q ss_pred cCChhHHHHHHHHHHHH
Q 020832 225 LGNMKDANYIMDEVKKQ 241 (321)
Q Consensus 225 l~n~~~A~~~~~~f~~~ 241 (321)
.++...|...+..-.+.
T Consensus 235 ~~~~~~A~~~~~~a~~~ 251 (273)
T 1ouv_A 235 TRNEKQAIENFKKGCKL 251 (273)
T ss_dssp SCCSTTHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHc
Confidence 67888888877665543
No 146
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=56.90 E-value=78 Score=25.71 Aligned_cols=121 Identities=12% Similarity=-0.060 Sum_probs=70.8
Q ss_pred CCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHHHH
Q 020832 157 TGSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYIMD 236 (321)
Q Consensus 157 ~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~ 236 (321)
..||+.+...|..+++.+ ++.+|..+|-..- ...++.....+..+ ...+...++...|...+.
T Consensus 4 ~~~~~~~~~~g~~~~~~~---~~~~A~~~~~~al-------------~~~~~~~~~~~~~~-~~~~~~~~~~~~A~~~~~ 66 (228)
T 4i17_A 4 TTDPNQLKNEGNDALNAK---NYAVAFEKYSEYL-------------KLTNNQDSVTAYNC-GVCADNIKKYKEAADYFD 66 (228)
T ss_dssp CCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHH-------------HHTTTCCHHHHHHH-HHHHHHTTCHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcc---CHHHHHHHHHHHH-------------hccCCCCcHHHHHH-HHHHHHhhcHHHHHHHHH
Confidence 358899999999999999 9999987764211 11111333344444 344677899999999887
Q ss_pred HHHHHhhhhccCCCCChhhhHHHHHHHHhccCChhHHHHHHHHhHHhhhcchhHH-------HHHHHHHHHhcCCC
Q 020832 237 EVKKQVENKQLQLQPSDLIQFVFYVLQTLERDALPLFNMLRANYKASIEREPAFN-------EMLDDIAEKFFGVK 305 (321)
Q Consensus 237 ~f~~~~~~~~~~~~~~PlLnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l~rd~~~~-------~~L~~Ig~~yFgi~ 305 (321)
...+..|.. ...+.+....+ ...+ -|..-.+.|+..++.+|.-. ...-.+|..|+...
T Consensus 67 ~al~~~p~~-----~~~~~~l~~~~---~~~~---~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~ 131 (228)
T 4i17_A 67 IAIKKNYNL-----ANAYIGKSAAY---RDMK---NNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAG 131 (228)
T ss_dssp HHHHTTCSH-----HHHHHHHHHHH---HHTT---CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCcch-----HHHHHHHHHHH---HHcc---cHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhc
Confidence 766532210 01112211111 1222 33445566777776666654 45667777776554
No 147
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=56.76 E-value=1.1e+02 Score=27.44 Aligned_cols=41 Identities=7% Similarity=-0.004 Sum_probs=32.0
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcC
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFVRG 189 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~ 189 (321)
....++|++-. -.++..|..+|.+|...+ ++.+|..+|-.+
T Consensus 250 ~~~~~~al~~~-------p~~~~a~~~lg~a~~~~g---~~~~A~~~l~~a 290 (338)
T 2if4_A 250 IGHCNIVLTEE-------EKNPKALFRRGKAKAELG---QMDSARDDFRKA 290 (338)
T ss_dssp HHHHHHHHHHC-------TTCHHHHHHHHHHHHTTT---CHHHHHHHHHHT
T ss_pred HHHHHHHHHhC-------CCCHHHHHHHHHHHHHcC---CHHHHHHHHHHH
Confidence 55566666532 147889999999999999 999999888754
No 148
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=56.65 E-value=74 Score=25.35 Aligned_cols=60 Identities=15% Similarity=0.081 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHHHHHHH
Q 020832 160 PELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYIMDEVK 239 (321)
Q Consensus 160 p~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f~ 239 (321)
..-|..+|..++..+ ++.+|..+|-..-++. ...+..++. .|...|+...|...+....
T Consensus 6 ~~~~~~~g~~~~~~~---~~~~A~~~~~~a~~~~-----------------~~~~~~lg~-~~~~~g~~~~A~~~~~~al 64 (213)
T 1hh8_A 6 AISLWNEGVLAADKK---DWKGALDAFSAVQDPH-----------------SRICFNIGC-MYTILKNMTEAEKAFTRSI 64 (213)
T ss_dssp HHHHHHHHHHHHHTT---CHHHHHHHHHTSSSCC-----------------HHHHHHHHH-HHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC---CHHHHHHHHHHHcCCC-----------------hHHHHHHHH-HHHHcCCHHHHHHHHHHHH
Confidence 344677888999999 9999998887664331 223333333 3456777777777766655
Q ss_pred H
Q 020832 240 K 240 (321)
Q Consensus 240 ~ 240 (321)
+
T Consensus 65 ~ 65 (213)
T 1hh8_A 65 N 65 (213)
T ss_dssp H
T ss_pred H
Confidence 4
No 149
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=56.44 E-value=88 Score=26.20 Aligned_cols=15 Identities=7% Similarity=0.149 Sum_probs=9.6
Q ss_pred hhCHHHHHHHHHHHH
Q 020832 47 AQRYSEALDLLHAGA 61 (321)
Q Consensus 47 ~~k~~eAi~lL~~ga 61 (321)
.+++++|++.+...+
T Consensus 55 ~~~~~~A~~~~~~a~ 69 (273)
T 1ouv_A 55 EKNLKKAASFYAKAC 69 (273)
T ss_dssp CCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 666777776666554
No 150
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=55.35 E-value=45 Score=22.98 Aligned_cols=79 Identities=15% Similarity=0.140 Sum_probs=51.0
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCC--hhHHHHH
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPG--EDDLAVA 216 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~--e~dlfi~ 216 (321)
....+++++-. -.++..+..+|.++...+ ++.+|..+|-.+ + +..|. ..+.+..
T Consensus 26 ~~~~~~a~~~~-------~~~~~~~~~~a~~~~~~~---~~~~A~~~~~~a---------~-----~~~~~~~~~~~~~~ 81 (112)
T 2kck_A 26 IDLFEKAIQLD-------PEESKYWLMKGKALYNLE---RYEEAVDCYNYV---------I-----NVIEDEYNKDVWAA 81 (112)
T ss_dssp HHHHHHHHHHC-------CCCHHHHHHHHHHHHHTT---CHHHHHHHHHHH---------H-----HTSCCTTCHHHHHH
T ss_pred HHHHHHHHHhC-------cCCHHHHHHHHHHHHHcc---CHHHHHHHHHHH---------H-----HhCcccchHHHHHH
Confidence 45555565422 247889999999999999 999887665321 1 11233 4444444
Q ss_pred HHHHHHHhc-CChhHHHHHHHHHHHHh
Q 020832 217 RAILMYLSL-GNMKDANYIMDEVKKQV 242 (321)
Q Consensus 217 RaVL~~L~l-~n~~~A~~~~~~f~~~~ 242 (321)
.+.+ +..+ ++.+.|...+...+...
T Consensus 82 l~~~-~~~~~~~~~~A~~~~~~~~~~~ 107 (112)
T 2kck_A 82 KADA-LRYIEGKEVEAEIAEARAKLEH 107 (112)
T ss_dssp HHHH-HTTCSSCSHHHHHHHHHHGGGC
T ss_pred HHHH-HHHHhCCHHHHHHHHHHHhhcc
Confidence 4443 5678 99999999887766543
No 151
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=54.24 E-value=1.7e+02 Score=28.81 Aligned_cols=75 Identities=11% Similarity=-0.000 Sum_probs=49.6
Q ss_pred CCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCCh----hHHHH-----HHHHHHHHhcCC
Q 020832 157 TGSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGE----DDLAV-----ARAILMYLSLGN 227 (321)
Q Consensus 157 ~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e----~dlfi-----~RaVL~~L~l~n 227 (321)
..+|.+-..+|+.+.+.+ ++..|++-|....|.+.+..+ +.- .+.+.. ..+.. ..|+..|+..|+
T Consensus 678 ~~~~~~W~~la~~al~~~---~~~~A~~~y~~~~d~~~l~~l-~~~--~~~~~~~~~~~~~a~~~~~~~~A~~~~~~~g~ 751 (814)
T 3mkq_A 678 ESAEMKWRALGDASLQRF---NFKLAIEAFTNAHDLESLFLL-HSS--FNNKEGLVTLAKDAETTGKFNLAFNAYWIAGD 751 (814)
T ss_dssp CCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHTCHHHHHHH-HHH--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTC
T ss_pred hCcHhHHHHHHHHHHHcC---CHHHHHHHHHHccChhhhHHH-HHH--cCCHHHHHHHHHHHHHcCchHHHHHHHHHcCC
Confidence 357889999999999999 999999999999997643332 211 110000 01111 225666888899
Q ss_pred hhHHHHHHHH
Q 020832 228 MKDANYIMDE 237 (321)
Q Consensus 228 ~~~A~~~~~~ 237 (321)
++.|.+++..
T Consensus 752 ~~~a~~~~~~ 761 (814)
T 3mkq_A 752 IQGAKDLLIK 761 (814)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9988887533
No 152
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=54.03 E-value=12 Score=25.52 Aligned_cols=39 Identities=13% Similarity=0.210 Sum_probs=29.8
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhh
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFV 187 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl 187 (321)
.++.++|++-. -.++..+..+|.++.+.+ ++.+|..+|-
T Consensus 29 ~~~~~~a~~~~-------~~~~~~~~~l~~~~~~~~---~~~~A~~~~~ 67 (91)
T 1na3_A 29 IEYYQKALELD-------PNNAEAWYNLGNAYYKQG---DYDEAIEYYQ 67 (91)
T ss_dssp HHHHHHHHHHC-------TTCHHHHHHHHHHHHHTT---CHHHHHHHHH
T ss_pred HHHHHHHHhcC-------CCCHHHHHHHHHHHHHHh---hHHHHHHHHH
Confidence 45555665422 247899999999999999 9999988775
No 153
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=53.98 E-value=63 Score=23.72 Aligned_cols=26 Identities=4% Similarity=-0.034 Sum_probs=19.6
Q ss_pred CHHHHHHHHHHHHhcCCCCChHHHhhHhh
Q 020832 159 SPELHVMLAEYLYSESPELDMARVSFHFV 187 (321)
Q Consensus 159 dp~LH~~la~~~~~e~~~~~~~~A~~Hfl 187 (321)
++..+..+|.+|...+ ++.+|..+|-
T Consensus 98 ~~~~~~~~a~~~~~~~---~~~~A~~~~~ 123 (148)
T 2dba_A 98 DVKALYRRSQALEKLG---RLDQAVLDLQ 123 (148)
T ss_dssp CHHHHHHHHHHHHHHT---CHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcC---CHHHHHHHHH
Confidence 5677778888888888 7777776664
No 154
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=53.79 E-value=1.4e+02 Score=27.54 Aligned_cols=38 Identities=13% Similarity=0.104 Sum_probs=28.1
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHh
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHF 186 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hf 186 (321)
.+..+++++-. -+++..+..+|.++...| ++.+|..+|
T Consensus 79 ~~~~~~al~~~-------p~~~~~~~~la~~~~~~g---~~~~A~~~~ 116 (537)
T 3fp2_A 79 IEFTTKALEIK-------PDHSKALLRRASANESLG---NFTDAMFDL 116 (537)
T ss_dssp HHHHHHHHHHC-------TTCHHHHHHHHHHHHHHT---CHHHHHHHH
T ss_pred HHHHHHHHhcC-------CchHHHHHHHHHHHHHcC---CHHHHHHHH
Confidence 45556665432 247788899999999989 888888877
No 155
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=52.85 E-value=1.1e+02 Score=26.41 Aligned_cols=27 Identities=15% Similarity=-0.037 Sum_probs=24.9
Q ss_pred CCHHHHHHHHHHHHhcCCCCChHHHhhHhh
Q 020832 158 GSPELHVMLAEYLYSESPELDMARVSFHFV 187 (321)
Q Consensus 158 Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl 187 (321)
++++.|..+|..|...| ++.+|..+|.
T Consensus 217 ~~~~~~~~la~~l~~~g---~~~~A~~~l~ 243 (287)
T 3qou_A 217 EDAALATQLALQLHQVG---RNEEALELLF 243 (287)
T ss_dssp TCHHHHHHHHHHHHHTT---CHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcc---cHHHHHHHHH
Confidence 58999999999999999 9999998776
No 156
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=52.39 E-value=70 Score=28.76 Aligned_cols=25 Identities=20% Similarity=0.193 Sum_probs=12.9
Q ss_pred HHHHHHHHhhhhCHHHHHHHHHHHH
Q 020832 37 YKSISARYVAAQRYSEALDLLHAGA 61 (321)
Q Consensus 37 ~RTl~~Ry~~~~k~~eAi~lL~~ga 61 (321)
+..+.+-|.++++|++|++.+....
T Consensus 150 ~~~~g~~~~~~g~~~~A~~~y~~Al 174 (336)
T 1p5q_A 150 VKERGTVYFKEGKYKQALLQYKKIV 174 (336)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 3444455555556666555544433
No 157
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=50.61 E-value=1.5e+02 Score=26.96 Aligned_cols=131 Identities=12% Similarity=0.058 Sum_probs=72.8
Q ss_pred CHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhh-ccCCChhHHHHHHHHHHHHhcCChhHHHHHHHH
Q 020832 159 SPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMG-KCYPGEDDLAVARAILMYLSLGNMKDANYIMDE 237 (321)
Q Consensus 159 dp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~-~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~ 237 (321)
...+|..+|.++..-| ++.+|..+|--+- ++.-+... ...+.-...+.-.| ..|..+|+...|...++.
T Consensus 50 ~a~~yn~Lg~~~~~~G---~~~eAl~~~~kAl------~~~~~~~~~~~~~~~~~~~~nla-~~y~~~g~~~~A~~~~~k 119 (472)
T 4g1t_A 50 KATMCNLLAYLKHLKG---QNEAALECLRKAE------ELIQQEHADQAEIRSLVTWGNYA-WVYYHMGRLSDVQIYVDK 119 (472)
T ss_dssp CCHHHHHHHHHHHHTT---CHHHHHHHHHHHH------HHHHHHSGGGCTTTTHHHHHHHH-HHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCC---CHHHHHHHHHHHH------HHHHhcCccccchHHHHHHHHHH-HHHHHcCChHHHHHHHHH
Confidence 3468999999999999 9999998885431 11111111 11111111222233 346778999999998877
Q ss_pred HHHHhhhhccC-CCCChhhhH-HHHHHHHhccCChhHHHHHHHHhHHhhhcchhHHHHHHHHHHHhc
Q 020832 238 VKKQVENKQLQ-LQPSDLIQF-VFYVLQTLERDALPLFNMLRANYKASIEREPAFNEMLDDIAEKFF 302 (321)
Q Consensus 238 f~~~~~~~~~~-~~~~PlLnF-~~lLl~t~e~~~~~~F~~L~~~Y~~~l~rd~~~~~~L~~Ig~~yF 302 (321)
..+..+....+ .+..|.+.. ....+..+.+ .-|..-.+.|+..++-+|....+...+|..++
T Consensus 120 a~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~ 183 (472)
T 4g1t_A 120 VKHVCEKFSSPYRIESPELDCEEGWTRLKCGG---NQNERAKVCFEKALEKKPKNPEFTSGLAIASY 183 (472)
T ss_dssp HHHHHHHSCCSSCCCCHHHHHHHHHHHHHHCT---THHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHHhHhcccccchhhHHHHHHHHHHHHHHcc---ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 76554433221 123343222 1122222222 23555667777777777766666666665554
No 158
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=49.72 E-value=74 Score=23.30 Aligned_cols=115 Identities=12% Similarity=0.051 Sum_probs=66.1
Q ss_pred CCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCCh---hHHHHHHHHHHHHhcCChhHHHH
Q 020832 157 TGSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGE---DDLAVARAILMYLSLGNMKDANY 233 (321)
Q Consensus 157 ~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e---~dlfi~RaVL~~L~l~n~~~A~~ 233 (321)
..++..+..+|..++..+ ++.+|..+|-..- . ..|.. ...+..++. .|...++...|..
T Consensus 25 ~~~~~~~~~~a~~~~~~~---~~~~A~~~~~~a~-------------~-~~~~~~~~~~~~~~~a~-~~~~~~~~~~A~~ 86 (148)
T 2dba_A 25 ASSVEQLRKEGNELFKCG---DYGGALAAYTQAL-------------G-LDATPQDQAVLHRNRAA-CHLKLEDYDKAET 86 (148)
T ss_dssp CCCHHHHHHHHHHHHTTT---CHHHHHHHHHHHH-------------T-SCCCHHHHHHHHHHHHH-HHHHTTCHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHH-------------H-HcccchHHHHHHHHHHH-HHHHHccHHHHHH
Confidence 357888999999999999 9999887664211 1 11222 334444444 4677899999999
Q ss_pred HHHHHHHHhhhhccCCCCChhhhHHHHHHHHhccCChhHHHHHHHHhHHhhhcchhHHHHHHHHHHH
Q 020832 234 IMDEVKKQVENKQLQLQPSDLIQFVFYVLQTLERDALPLFNMLRANYKASIEREPAFNEMLDDIAEK 300 (321)
Q Consensus 234 ~~~~f~~~~~~~~~~~~~~PlLnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l~rd~~~~~~L~~Ig~~ 300 (321)
.+....+..+. ....+.+....+. ..+ -+..-...|+..++.+|........++++
T Consensus 87 ~~~~~~~~~~~-----~~~~~~~~a~~~~---~~~---~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 142 (148)
T 2dba_A 87 EASKAIEKDGG-----DVKALYRRSQALE---KLG---RLDQAVLDLQRCVSLEPKNKVFQEALRNI 142 (148)
T ss_dssp HHHHHHHHTSC-----CHHHHHHHHHHHH---HHT---CHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred HHHHHHhhCcc-----CHHHHHHHHHHHH---HcC---CHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Confidence 88777654221 1112222222221 122 23444566666666666555555555443
No 159
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=49.03 E-value=67 Score=22.60 Aligned_cols=77 Identities=13% Similarity=0.118 Sum_probs=49.1
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHH
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARA 218 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~Ra 218 (321)
.++++++++.. .+++..+..+|.++...+ ++.+|..+|-.+- .. .|.....+...
T Consensus 55 ~~~~~~~~~~~-------~~~~~~~~~l~~~~~~~~---~~~~A~~~~~~~~-------------~~-~~~~~~~~~~l- 109 (136)
T 2fo7_A 55 IEYYQKALELD-------PRSAEAWYNLGNAYYKQG---DYDEAIEYYQKAL-------------EL-DPRSAEAWYNL- 109 (136)
T ss_dssp HHHHHHHHHHC-------TTCHHHHHHHHHHHHTTT---CHHHHHHHHHHHH-------------HH-CTTCHHHHHHH-
T ss_pred HHHHHHHHHHC-------CCchHHHHHHHHHHHHhc---CHHHHHHHHHHHH-------------Hh-CCCChHHHHHH-
Confidence 45555665432 246888999999999999 9999887664211 11 12223333333
Q ss_pred HHHHHhcCChhHHHHHHHHHHH
Q 020832 219 ILMYLSLGNMKDANYIMDEVKK 240 (321)
Q Consensus 219 VL~~L~l~n~~~A~~~~~~f~~ 240 (321)
...+...++...|...+.....
T Consensus 110 a~~~~~~~~~~~A~~~~~~~~~ 131 (136)
T 2fo7_A 110 GNAYYKQGDYDEAIEYYQKALE 131 (136)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHccHHHHHHHHHHHHc
Confidence 3345678999999988877665
No 160
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=48.96 E-value=1.7e+02 Score=27.15 Aligned_cols=91 Identities=9% Similarity=0.041 Sum_probs=44.3
Q ss_pred CCChhHHHHHHHHHHHHhcCChhHHHH--HHHHHHHHhhhhccCCCCChhhhHHHHHHHHhccCChhHHHHHHHHhHHhh
Q 020832 207 YPGEDDLAVARAILMYLSLGNMKDANY--IMDEVKKQVENKQLQLQPSDLIQFVFYVLQTLERDALPLFNMLRANYKASI 284 (321)
Q Consensus 207 ~~~e~dlfi~RaVL~~L~l~n~~~A~~--~~~~f~~~~~~~~~~~~~~PlLnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l 284 (321)
.|...+.+..|+.+-.-..+....|.. -+..|.+-+. ..+ ......+.+..++.. .+ ..-+....+.+...
T Consensus 230 ~P~~~~a~~~lg~~l~~l~~~~~eA~~~~el~~~~~Al~-l~P--~~~~a~~~l~~ll~~--~g-~~~~~~a~~~~~~~- 302 (382)
T 2h6f_A 230 DVRNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIK-LVP--HNESAWNYLKGILQD--RG-LSKYPNLLNQLLDL- 302 (382)
T ss_dssp CTTCHHHHHHHHHHHHHTTCSCSHHHHHHHHHHHHHHHH-HST--TCHHHHHHHHHHHTT--TC-GGGCHHHHHHHHHH-
T ss_pred CCCCHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHH-HCC--CCHHHHHHHHHHHHc--cC-ccchHHHHHHHHHh-
Confidence 355566677777765443555455531 1222222221 221 122234443334333 22 11233333444444
Q ss_pred hcchhHHHHHHHHHHHhcCC
Q 020832 285 EREPAFNEMLDDIAEKFFGV 304 (321)
Q Consensus 285 ~rd~~~~~~L~~Ig~~yFgi 304 (321)
+.+|.....+..+|.+|...
T Consensus 303 ~~~p~~~~al~~La~~~~~~ 322 (382)
T 2h6f_A 303 QPSHSSPYLIAFLVDIYEDM 322 (382)
T ss_dssp TTTCCCHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHH
Confidence 66777778888888888765
No 161
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=48.10 E-value=68 Score=26.90 Aligned_cols=74 Identities=12% Similarity=0.066 Sum_probs=42.0
Q ss_pred hHHHHHHHHHHhccCChhHHHHHHHHHHHHHhhhhCHHHHHHHHHH---HHHHHHHCCCcchHHHHHHHHHHHHhhC
Q 020832 14 AQENIDKLEKIVNEGNFYGAQQMYKSISARYVAAQRYSEALDLLHA---GACLQLKNNQLTCGAELAVSFVEALVKG 87 (321)
Q Consensus 14 ~~r~l~rl~~~i~~G~~YEAhQ~~RTl~~Ry~~~~k~~eAi~lL~~---ga~~ll~~~Q~~s~~DL~~~lvev~~~~ 87 (321)
..+.+..-...++.|+|||||..+-.+-.+.-....-.+.+.=|-+ +|..-++.|....|.=|..--+.-+...
T Consensus 32 ~~~~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~L~~~ 108 (161)
T 2ijq_A 32 LRRAVVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQYFRGV 108 (161)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTS
T ss_pred ccHHHHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 3456666677889999999999988877665322001122222222 2233345666666665555555555443
No 162
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=46.37 E-value=77 Score=22.58 Aligned_cols=118 Identities=13% Similarity=0.045 Sum_probs=70.9
Q ss_pred hhHHHHHHHHHHhccCChhHHHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCCC
Q 020832 13 PAQENIDKLEKIVNEGNFYGAQQMYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAYD 92 (321)
Q Consensus 13 ~~~r~l~rl~~~i~~G~~YEAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~ 92 (321)
.+......-......|+|=+|...++........ -.+.++.-+..+.+.|++..|.+.....++.. |-+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~------~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~-----~~~ 83 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPK------DAKLYSNRAACYTKLLEFQLALKDCEECIQLE-----PTF 83 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTT------CHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHC-----TTC
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC------cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-----CCc
Confidence 4444555556678888888888888776654321 24556666777778888877776655555431 223
Q ss_pred hhHHHHHHHHHHhCCCCCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHh
Q 020832 93 NENLDRVRKIYELFPQIPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYS 172 (321)
Q Consensus 93 ~~~~~rl~~l~~~~p~~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~ 172 (321)
......+..++..... ..++ .++++++++... .+++.+..+|.++..
T Consensus 84 ~~~~~~la~~~~~~~~---------------~~~A-----------~~~~~~~~~~~p-------~~~~~~~~l~~~~~~ 130 (133)
T 2lni_A 84 IKGYTRKAAALEAMKD---------------YTKA-----------MDVYQKALDLDS-------SCKEAADGYQRCMMA 130 (133)
T ss_dssp HHHHHHHHHHHHHTTC---------------HHHH-----------HHHHHHHHHHCG-------GGTHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhh---------------HHHH-----------HHHHHHHHHhCC-------CchHHHHHHHHHHHH
Confidence 3444555555543210 1222 566667776543 256788888888876
Q ss_pred cC
Q 020832 173 ES 174 (321)
Q Consensus 173 e~ 174 (321)
.+
T Consensus 131 ~~ 132 (133)
T 2lni_A 131 QY 132 (133)
T ss_dssp HT
T ss_pred hc
Confidence 54
No 163
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=45.90 E-value=90 Score=23.22 Aligned_cols=39 Identities=15% Similarity=0.001 Sum_probs=29.7
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhh
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFV 187 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl 187 (321)
...+++|++-. -.+++.|..+|.+|...| ++.+|..+|-
T Consensus 71 ~~~~~~al~l~-------P~~~~~~~~la~~~~~~g---~~~~A~~~~~ 109 (121)
T 1hxi_A 71 IIALNHARMLD-------PKDIAVHAALAVSHTNEH---NANAALASLR 109 (121)
T ss_dssp HHHHHHHHHHC-------TTCHHHHHHHHHHHHHHH---HHHHHHHHHH
T ss_pred HHHHHHHHHhC-------CCCHHHHHHHHHHHHHcC---CHHHHHHHHH
Confidence 44556666532 147889999999999999 9999988875
No 164
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=45.87 E-value=54 Score=25.35 Aligned_cols=40 Identities=8% Similarity=0.162 Sum_probs=31.0
Q ss_pred HHHHhhhcCCCCCCCHHHHHHHHHHHHh----cCCCCChHHHhhHhhcC
Q 020832 145 AIKWSIEFGAPKTGSPELHVMLAEYLYS----ESPELDMARVSFHFVRG 189 (321)
Q Consensus 145 ai~WS~~~g~~~~Gdp~LH~~la~~~~~----e~~~~~~~~A~~Hfl~~ 189 (321)
|++|-.+.- ..|+|.-+..+|.+|.+ ++ ++.+|..+|-.+
T Consensus 44 A~~~~~~Aa--~~g~~~a~~~Lg~~y~~G~g~~~---d~~~A~~~~~~A 87 (138)
T 1klx_A 44 LFQYLSKAC--ELNSGNGCRFLGDFYENGKYVKK---DLRKAAQYYSKA 87 (138)
T ss_dssp HHHHHHHHH--HTTCHHHHHHHHHHHHHCSSSCC---CHHHHHHHHHHH
T ss_pred HHHHHHHHH--cCCCHHHHHHHHHHHHcCCCCCc---cHHHHHHHHHHH
Confidence 666655543 25899999999999998 66 889998888753
No 165
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=45.50 E-value=77 Score=22.30 Aligned_cols=39 Identities=10% Similarity=-0.113 Sum_probs=28.9
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhh
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFV 187 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl 187 (321)
..+++++++-. -.++..+..+|.++...+ ++.+|..+|-
T Consensus 66 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~---~~~~A~~~~~ 104 (131)
T 2vyi_A 66 VQDCERAICID-------PAYSKAYGRMGLALSSLN---KHVEAVAYYK 104 (131)
T ss_dssp HHHHHHHHHHC-------TTCHHHHHHHHHHHHHTT---CHHHHHHHHH
T ss_pred HHHHHHHHhcC-------ccCHHHHHHHHHHHHHhC---CHHHHHHHHH
Confidence 45555665421 236889999999999999 9999887764
No 166
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=44.18 E-value=19 Score=25.44 Aligned_cols=39 Identities=10% Similarity=-0.104 Sum_probs=30.0
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhh
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFV 187 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl 187 (321)
....++|++-. -.++..+..+|.+|.+.+ ++.+|..+|-
T Consensus 24 ~~~~~~al~~~-------p~~~~~~~~lg~~~~~~g---~~~~A~~~~~ 62 (111)
T 2l6j_A 24 VHCYDQLITAQ-------PQNPVGYSNKAMALIKLG---EYTQAIQMCQ 62 (111)
T ss_dssp HHHHHHHHHHC-------TTCHHHHHHHHHHHHHTT---CHHHHHHHHH
T ss_pred HHHHHHHHhcC-------CCCHHHHHHHHHHHHHhc---CHHHHHHHHH
Confidence 45566666542 247899999999999999 9999987775
No 167
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=42.08 E-value=2.2e+02 Score=26.69 Aligned_cols=83 Identities=16% Similarity=0.118 Sum_probs=56.2
Q ss_pred CCHHHHHHHHHHHHhcCCCCChHHHhhHhhc--CCC---hH----HHHHHHHH---------Hhh---ccCCChhHHHHH
Q 020832 158 GSPELHVMLAEYLYSESPELDMARVSFHFVR--GNN---PE----KFASTIVN---------FMG---KCYPGEDDLAVA 216 (321)
Q Consensus 158 Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~--~~~---~~----~~a~~L~e---------w~~---~~~~~e~dlfi~ 216 (321)
.++.+|...|..+.+.| ++.+|+..|-. ..+ +. .++.++.. .+. +..|...++++.
T Consensus 319 ~~~~l~~~~~~~~~~~g---~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~ 395 (530)
T 2ooe_A 319 KNMLLYFAYADYEESRM---KYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVT 395 (530)
T ss_dssp SCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHH
T ss_pred ccHHHHHHHHHHHHhcC---CHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHH
Confidence 47899999999999999 99988877652 222 21 12222110 111 223455677888
Q ss_pred HHHHHHHhcCChhHHHHHHHHHHHHhh
Q 020832 217 RAILMYLSLGNMKDANYIMDEVKKQVE 243 (321)
Q Consensus 217 RaVL~~L~l~n~~~A~~~~~~f~~~~~ 243 (321)
.+.+.+.+.|+...|...|+.-.+..|
T Consensus 396 ~a~~~~~~~~~~~~A~~~~e~al~~~p 422 (530)
T 2ooe_A 396 AALMEYYCSKDKSVAFKIFELGLKKYG 422 (530)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCChhHHHHHHHHHHHHCC
Confidence 887877789999999999988777554
No 168
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=41.78 E-value=1.7e+02 Score=25.21 Aligned_cols=81 Identities=7% Similarity=-0.107 Sum_probs=54.0
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHH
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARA 218 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~Ra 218 (321)
....++|++-. -.++.++..+|.+|.+.+ ++.+|..++-.+-. ..|.....+..++
T Consensus 24 ~~~~~~al~~~-------p~~~~~~~~la~~~~~~~---~~~~A~~~~~~al~--------------~~p~~~~~~~~lg 79 (281)
T 2c2l_A 24 AACYGRAITRN-------PLVAVYYTNRALCYLKMQ---QPEQALADCRRALE--------------LDGQSVKAHFFLG 79 (281)
T ss_dssp HHHHHHHHHHC-------SCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHTT--------------SCTTCHHHHHHHH
T ss_pred HHHHHHHHHhC-------CccHHHHHHHHHHHHHhc---CHHHHHHHHHHHHH--------------hCCCCHHHHHHHH
Confidence 44555555431 237899999999999999 99999876643221 1234444455555
Q ss_pred HHHHHhcCChhHHHHHHHHHHHHhhh
Q 020832 219 ILMYLSLGNMKDANYIMDEVKKQVEN 244 (321)
Q Consensus 219 VL~~L~l~n~~~A~~~~~~f~~~~~~ 244 (321)
.. |..+|+...|...|....+..++
T Consensus 80 ~~-~~~~g~~~~A~~~~~~al~l~p~ 104 (281)
T 2c2l_A 80 QC-QLEMESYDEAIANLQRAYSLAKE 104 (281)
T ss_dssp HH-HHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HH-HHHcCCHHHHHHHHHHHHHhCcc
Confidence 44 56788888888888877765553
No 169
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=41.18 E-value=1.7e+02 Score=25.18 Aligned_cols=28 Identities=18% Similarity=0.175 Sum_probs=20.9
Q ss_pred CCHHHHHHHHHHHHhcCCCCChHHHhhHhhc
Q 020832 158 GSPELHVMLAEYLYSESPELDMARVSFHFVR 188 (321)
Q Consensus 158 Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~ 188 (321)
++++.|..+|.++...| ++.+|..+|-.
T Consensus 149 ~~~~a~~~la~~~~~~g---~~~~A~~~l~~ 176 (287)
T 3qou_A 149 QNGEIGLLLAETLIALN---RSEDAEAVLXT 176 (287)
T ss_dssp SCHHHHHHHHHHHHHTT---CHHHHHHHHTT
T ss_pred cchhHHHHHHHHHHHCC---CHHHHHHHHHh
Confidence 46777888888888777 77777777654
No 170
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=40.95 E-value=22 Score=24.98 Aligned_cols=39 Identities=5% Similarity=0.012 Sum_probs=29.5
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHH-HHHHHHHHHHhcCCCCChHHHhhHhh
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPE-LHVMLAEYLYSESPELDMARVSFHFV 187 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~-LH~~la~~~~~e~~~~~~~~A~~Hfl 187 (321)
....+++++-. -.++. .+..+|.+|...+ ++.+|..+|-
T Consensus 20 ~~~~~~al~~~-------p~~~~~~~~~lg~~~~~~~---~~~~A~~~~~ 59 (99)
T 2kc7_A 20 LQALEEFLQTE-------PVGKDEAYYLMGNAYRKLG---DWQKALNNYQ 59 (99)
T ss_dssp HHHHHHHHHHC-------SSTHHHHHHHHHHHHHHHT---CHHHHHHHHH
T ss_pred HHHHHHHHHHC-------CCcHHHHHHHHHHHHHHcC---CHHHHHHHHH
Confidence 45555555422 24788 9999999999999 9999998775
No 171
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=40.77 E-value=1.1e+02 Score=22.94 Aligned_cols=24 Identities=8% Similarity=0.264 Sum_probs=20.0
Q ss_pred HHHHhccCChhHHHHHHHHHHHHH
Q 020832 21 LEKIVNEGNFYGAQQMYKSISARY 44 (321)
Q Consensus 21 l~~~i~~G~~YEAhQ~~RTl~~Ry 44 (321)
-...+++|+|||||..+-.+-...
T Consensus 8 ~~~lfn~g~~~eaHEvlE~~W~~~ 31 (94)
T 2cwy_A 8 VLGLWRAGRYYEVHEVLEPYWLKA 31 (94)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHhCCChHHHHHHHHHHHhhC
Confidence 345678899999999999988776
No 172
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=40.01 E-value=1.7e+02 Score=24.65 Aligned_cols=104 Identities=9% Similarity=-0.090 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHH--hCCCCCCCCCCCCCchhHHHHHHHhhhhh
Q 020832 56 LLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAYDNENLDRVRKIYE--LFPQIPVPHNLEDDDDLHELTEALGAAKL 133 (321)
Q Consensus 56 lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~~~~~~rl~~l~~--~~p~~~~~r~l~~~~~~~~~~e~~~~~~~ 133 (321)
.|++-...|+++|++.|+.=|+.+++..........+.+..-++.-.+. .|...+=
T Consensus 22 ~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~ey---------------------- 79 (167)
T 3ffl_A 22 NVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEY---------------------- 79 (167)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCH----------------------
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHH----------------------
Confidence 3556667888999999999888888888766655556555544444433 1211110
Q ss_pred hhhhhhHHHHHHHHHhhhcCC------------------CCCCCHHHHHHHHHHHHhcCCCCChHHHhhHh
Q 020832 134 RVEGCSSFLKAAIKWSIEFGA------------------PKTGSPELHVMLAEYLYSESPELDMARVSFHF 186 (321)
Q Consensus 134 ~~~~~~~fl~~ai~WS~~~g~------------------~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hf 186 (321)
+.. .++.++|++-.+.... .-..+-++-..+|.+|.+-+ ++.+|..-+
T Consensus 80 -rrA-~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~---~~~~Ai~~L 145 (167)
T 3ffl_A 80 -RNA-VSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLK---QDKDAIAIL 145 (167)
T ss_dssp -HHH-HHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTT---CHHHHHHHH
T ss_pred -HHH-HHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHC---CHHHHHHHH
Confidence 000 3444444443331110 01234489999999999999 888887544
No 173
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A*
Probab=39.95 E-value=1.4e+02 Score=28.65 Aligned_cols=71 Identities=18% Similarity=0.209 Sum_probs=53.1
Q ss_pred HHHHH-HHHhccCChhHHHHHHHHHHH---HHhhhh----------------------------------CHHHHHHHHH
Q 020832 17 NIDKL-EKIVNEGNFYGAQQMYKSISA---RYVAAQ----------------------------------RYSEALDLLH 58 (321)
Q Consensus 17 ~l~rl-~~~i~~G~~YEAhQ~~RTl~~---Ry~~~~----------------------------------k~~eAi~lL~ 58 (321)
-+.+| +...+.|+|=||=+.+..++. +|.+.. .-+..+++|.
T Consensus 13 wl~~La~~h~~~~n~~EAa~cl~~~aaliae~L~~~~~~~~~~~~f~~i~p~~~ee~~~~~d~g~~~~~fte~~l~~ll~ 92 (428)
T 2wm9_A 13 WLDSMARIHVKNGDLSEAAMCYVHVTALVAEYLTRKGVFRQGCTAFRVITPNIDEEASMMEDVGMQDVHFNEDVLMELLE 92 (428)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHTTSSSCCGGGGTTTCGGGGGGC---------CCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhcCCCccchhccccccCCCccccCHHHHHHHHH
Confidence 34444 456889999999999875443 544322 1223466888
Q ss_pred HHHHHHHHCCCcchHHHHHHHHHHHHhhC
Q 020832 59 AGACLQLKNNQLTCGAELAVSFVEALVKG 87 (321)
Q Consensus 59 ~ga~~ll~~~Q~~s~~DL~~~lvev~~~~ 87 (321)
+.+..|-+.+-|..|.+++..++..|++.
T Consensus 93 ~ai~~f~kg~~~E~ai~~~k~L~~~ye~~ 121 (428)
T 2wm9_A 93 QCADGLWKAERYELIADIYKLIIPIYEKR 121 (428)
T ss_dssp HHHHHHHHTTCGGGHHHHHTTTHHHHHHT
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHHHh
Confidence 88888888899999999999999999986
No 174
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=38.80 E-value=1.2e+02 Score=22.59 Aligned_cols=118 Identities=8% Similarity=-0.024 Sum_probs=60.1
Q ss_pred HHhccCChhHHHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCCChhHHHHHHHH
Q 020832 23 KIVNEGNFYGAQQMYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAYDNENLDRVRKI 102 (321)
Q Consensus 23 ~~i~~G~~YEAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~~~~~~rl~~l 102 (321)
..+..|+|=+|...++........ -.+.++.-+..+...|++..|.+.....++.. |-+......+..+
T Consensus 22 ~~~~~~~~~~A~~~~~~al~~~~~------~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~-----~~~~~~~~~~a~~ 90 (166)
T 1a17_A 22 DYFKAKDYENAIKFYSQAIELNPS------NAIYYGNRSLAYLRTECYGYALGDATRAIELD-----KKYIKGYYRRAAS 90 (166)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTCHHHHHHHHHH
T ss_pred HHHHccCHHHHHHHHHHHHHhCCC------ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----cccHHHHHHHHHH
Confidence 345566666666666555543221 13444555556666777766665554444432 2223333444444
Q ss_pred HHhCCCCCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHHHHHH--HHhcCCCCChH
Q 020832 103 YELFPQIPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVMLAEY--LYSESPELDMA 180 (321)
Q Consensus 103 ~~~~p~~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~--~~~e~~~~~~~ 180 (321)
+..... ..++ ...+.++++-. -.++..+..++.. +.+.+ ++.
T Consensus 91 ~~~~~~---------------~~~A-----------~~~~~~a~~~~-------p~~~~~~~~~~~~~~~~~~~---~~~ 134 (166)
T 1a17_A 91 NMALGK---------------FRAA-----------LRDYETVVKVK-------PHDKDAKMKYQECNKIVKQK---AFE 134 (166)
T ss_dssp HHHTTC---------------HHHH-----------HHHHHHHHHHS-------TTCHHHHHHHHHHHHHHHHH---HHH
T ss_pred HHHhcc---------------HHHH-----------HHHHHHHHHhC-------CCCHHHHHHHHHHHHHHHHH---HHH
Confidence 432210 1222 45556665432 1366666444444 77777 888
Q ss_pred HHhhHhh
Q 020832 181 RVSFHFV 187 (321)
Q Consensus 181 ~A~~Hfl 187 (321)
+|...+-
T Consensus 135 ~A~~~~~ 141 (166)
T 1a17_A 135 RAIAGDE 141 (166)
T ss_dssp HHHHHHH
T ss_pred HHHHccc
Confidence 8776653
No 175
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=38.11 E-value=2e+02 Score=24.87 Aligned_cols=17 Identities=12% Similarity=0.229 Sum_probs=8.9
Q ss_pred HhcCChhHHHHHHHHHH
Q 020832 223 LSLGNMKDANYIMDEVK 239 (321)
Q Consensus 223 L~l~n~~~A~~~~~~f~ 239 (321)
...|+...|..+|+..+
T Consensus 214 ~~~g~~~~A~~~~~~al 230 (308)
T 2ond_A 214 SHLNEDNNTRVLFERVL 230 (308)
T ss_dssp HTTCCHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHH
Confidence 34455555555555444
No 176
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=37.74 E-value=96 Score=22.03 Aligned_cols=73 Identities=7% Similarity=-0.033 Sum_probs=34.9
Q ss_pred HhccCChhHHHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCCChhHHHHHHHHH
Q 020832 24 IVNEGNFYGAQQMYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAYDNENLDRVRKIY 103 (321)
Q Consensus 24 ~i~~G~~YEAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~~~~~~rl~~l~ 103 (321)
.+..|+|=+|...++........ -.+..+.-+..+.+.|++..|.+.....++.-.+. -+......+..++
T Consensus 17 ~~~~g~~~~A~~~~~~al~~~p~------~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~---~~~~~~~~l~~~l 87 (100)
T 3ma5_A 17 HLKHDNASRALALFEELVETDPD------YVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREE---GTQKDLSELQDAK 87 (100)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTT------CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH---SCHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCC------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcC---CchhHHHHHHHHH
Confidence 44566666666666665544321 11233334455556666666555544444433222 1333444455555
Q ss_pred Hh
Q 020832 104 EL 105 (321)
Q Consensus 104 ~~ 105 (321)
..
T Consensus 88 ~~ 89 (100)
T 3ma5_A 88 LK 89 (100)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 177
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=37.29 E-value=93 Score=23.13 Aligned_cols=78 Identities=10% Similarity=-0.089 Sum_probs=50.6
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHH
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARA 218 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~Ra 218 (321)
...+++|++-. -.+++.|..+|.++...+ ++.+|..+|-.. + +-.|...+.+...+
T Consensus 37 ~~~~~~al~~~-------P~~~~a~~~lg~~~~~~g---~~~~A~~~~~~a---------l-----~l~P~~~~~~~~la 92 (121)
T 1hxi_A 37 ALAFEAVCQKE-------PEREEAWRSLGLTQAENE---KDGLAIIALNHA---------R-----MLDPKDIAVHAALA 92 (121)
T ss_dssp HHHHHHHHHHS-------TTCHHHHHHHHHHHHHTT---CHHHHHHHHHHH---------H-----HHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHC-------CCCHHHHHHHHHHHHHcC---CHHHHHHHHHHH---------H-----HhCCCCHHHHHHHH
Confidence 45556666522 247899999999999999 998888665321 1 11244444455555
Q ss_pred HHHHHhcCChhHHHHHHHHHHHH
Q 020832 219 ILMYLSLGNMKDANYIMDEVKKQ 241 (321)
Q Consensus 219 VL~~L~l~n~~~A~~~~~~f~~~ 241 (321)
++ |...|+...|...++...+.
T Consensus 93 ~~-~~~~g~~~~A~~~~~~al~~ 114 (121)
T 1hxi_A 93 VS-HTNEHNANAALASLRAWLLS 114 (121)
T ss_dssp HH-HHHHHHHHHHHHHHHHHHC-
T ss_pred HH-HHHcCCHHHHHHHHHHHHHh
Confidence 43 56678888888887776653
No 178
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=36.17 E-value=2.3e+02 Score=25.15 Aligned_cols=129 Identities=12% Similarity=0.053 Sum_probs=72.6
Q ss_pred CHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCC--hHH--HHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHH
Q 020832 159 SPELHVMLAEYLYSESPELDMARVSFHFVRGNN--PEK--FASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYI 234 (321)
Q Consensus 159 dp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~--~~~--~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~ 234 (321)
++..+..+|..|++.+ ++.+|..+|-.+-. |.. +.. -++ .+..+.....+..++. .|+.+++...|...
T Consensus 146 ~a~~~~~~g~~~~~~g---~~~~A~~~y~~Al~~~p~~~~~~~--~~~-~~~~~~~~~~~~nla~-~~~~~g~~~~A~~~ 218 (336)
T 1p5q_A 146 QSTIVKERGTVYFKEG---KYKQALLQYKKIVSWLEYESSFSN--EEA-QKAQALRLASHLNLAM-CHLKLQAFSAAIES 218 (336)
T ss_dssp HHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHTTTCCCCCS--HHH-HHHHHHHHHHHHHHHH-HHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHHhhccccCCh--HHH-HHHHHHHHHHHHHHHH-HHHHcCCHHHHHHH
Confidence 5678899999999999 99999877752110 100 000 000 0000001234444444 56778999999988
Q ss_pred HHHHHHHhhhhccCCCCChhhhHHHHHHHHhccCChhHHHHHHHHhHHhhhcchhHHHHHHHHHHHhcCCC
Q 020832 235 MDEVKKQVENKQLQLQPSDLIQFVFYVLQTLERDALPLFNMLRANYKASIEREPAFNEMLDDIAEKFFGVK 305 (321)
Q Consensus 235 ~~~f~~~~~~~~~~~~~~PlLnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l~rd~~~~~~L~~Ig~~yFgi~ 305 (321)
++.-.+.-|.. ...+.|....+. .. .-|..-.+.|+..++.+|........+|..|..+.
T Consensus 219 ~~~al~~~p~~-----~~a~~~lg~~~~---~~---g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~ 278 (336)
T 1p5q_A 219 CNKALELDSNN-----EKGLSRRGEAHL---AV---NDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIR 278 (336)
T ss_dssp HHHHHHHCTTC-----HHHHHHHHHHHH---HT---TCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCc-----HHHHHHHHHHHH---HC---CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Confidence 87766543211 112222222221 11 23455567777777777877777777887777654
No 179
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=35.95 E-value=29 Score=25.54 Aligned_cols=39 Identities=18% Similarity=0.173 Sum_probs=30.7
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhh
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFV 187 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl 187 (321)
...+.+|++-. -.++..+..+|.+|.+.| ++.+|..+|-
T Consensus 47 ~~~~~~al~~~-------p~~~~~~~~l~~~~~~~g---~~~~A~~~~~ 85 (117)
T 3k9i_A 47 EAVLANGVKQF-------PNHQALRVFYAMVLYNLG---RYEQGVELLL 85 (117)
T ss_dssp HHHHHHHHHHC-------TTCHHHHHHHHHHHHHHT---CHHHHHHHHH
T ss_pred HHHHHHHHHhC-------CCchHHHHHHHHHHHHcC---CHHHHHHHHH
Confidence 55666666542 236899999999999999 9999997765
No 180
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=34.45 E-value=1.5e+02 Score=22.29 Aligned_cols=65 Identities=12% Similarity=-0.094 Sum_probs=45.2
Q ss_pred CHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHHHHHH
Q 020832 159 SPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYIMDEV 238 (321)
Q Consensus 159 dp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f 238 (321)
+++.+..+|..+.+.+ ++.+|..+|-. . -...|...+.+...+.. |...++...|...|+.-
T Consensus 17 ~~~~~~~~a~~~~~~g---~~~~A~~~~~~---------a-----l~~~p~~~~~~~~lg~~-~~~~g~~~~A~~~~~~a 78 (142)
T 2xcb_A 17 TLEQLYALGFNQYQAG---KWDDAQKIFQA---------L-----CMLDHYDARYFLGLGAC-RQSLGLYEQALQSYSYG 78 (142)
T ss_dssp HHHHHHHHHHHHHHTT---CHHHHHHHHHH---------H-----HHHCTTCHHHHHHHHHH-HHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc---cHHHHHHHHHH---------H-----HHhCCccHHHHHHHHHH-HHHHhhHHHHHHHHHHH
Confidence 5677888999999999 99999877631 1 11234555555555554 46788888888887776
Q ss_pred HHH
Q 020832 239 KKQ 241 (321)
Q Consensus 239 ~~~ 241 (321)
.+.
T Consensus 79 l~~ 81 (142)
T 2xcb_A 79 ALM 81 (142)
T ss_dssp HHH
T ss_pred Hhc
Confidence 653
No 181
>3a1y_A 50S ribosomal protein P1 (L12P); stalk, helix SPIN, ribonucleoprotein; 2.13A {Pyrococcus horikoshii}
Probab=33.87 E-value=82 Score=21.73 Aligned_cols=41 Identities=15% Similarity=0.080 Sum_probs=32.5
Q ss_pred HHHHHHHCCCcchHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHH
Q 020832 60 GACLQLKNNQLTCGAELAVSFVEALVKGKVAYDNENLDRVRKIYE 104 (321)
Q Consensus 60 ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~~~~~~rl~~l~~ 104 (321)
.+..|...|.--++-|+ -.+++..|+++++.|...+++-++
T Consensus 6 AallL~~~g~~~t~~~I----~~il~aaGveve~~~~~~~~~~L~ 46 (58)
T 3a1y_A 6 AALLLHSVGKEINEENL----KAVLQAAGVEPEEARIKALVAALE 46 (58)
T ss_dssp HHHHHHHTTCCCCHHHH----HHHHHHTTCCCCHHHHHHHHHHHS
T ss_pred HHHHHHhCCCCCCHHHH----HHHHHHcCCCccHHHHHHHHHHHC
Confidence 45566677777788887 567799999999999998888775
No 182
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=33.81 E-value=69 Score=30.64 Aligned_cols=116 Identities=9% Similarity=-0.021 Sum_probs=62.0
Q ss_pred hccCChhHHHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHH
Q 020832 25 VNEGNFYGAQQMYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAYDNENLDRVRKIYE 104 (321)
Q Consensus 25 i~~G~~YEAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~~~~~~rl~~l~~ 104 (321)
...|+|=+|.+.|+........ ..+.++.-+..+.+.|++..|.+.....++. .|-+.....++..++.
T Consensus 17 ~~~g~~~~A~~~~~~Al~~~p~------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l-----~p~~~~~~~~lg~~~~ 85 (477)
T 1wao_1 17 FKAKDYENAIKFYSQAIELNPS------NAIYYGNRSLAYLRTECYGYALGDATRAIEL-----DKKYIKGYYRRAASNM 85 (477)
T ss_dssp TTTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS-----CTTCHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHhCCc------cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-----CCCCHHHHHHHHHHHH
Confidence 4567777777777766554211 1445556666777777777766654444332 1223344455555554
Q ss_pred hCCCCCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHHHHHH--HHhcCCCCChHHH
Q 020832 105 LFPQIPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVMLAEY--LYSESPELDMARV 182 (321)
Q Consensus 105 ~~p~~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~--~~~e~~~~~~~~A 182 (321)
... +.+|| .+..++|++-. -.+++.+..+|.+ +.+.+ ++.+|
T Consensus 86 ~~g---------------~~~eA-----------~~~~~~al~~~-------p~~~~~~~~l~~~~~~~~~g---~~~~A 129 (477)
T 1wao_1 86 ALG---------------KFRAA-----------LRDYETVVKVK-------PHDKDAKMKYQECNKIVKQK---AFERA 129 (477)
T ss_dssp HHT---------------CHHHH-----------HHHHHHHHHHS-------TTCTTHHHHHHHHHHHHHHH---HHCCC
T ss_pred HcC---------------CHHHH-----------HHHHHHHHHhC-------CCCHHHHHHHHHHHHHHHHH---HHHHH
Confidence 321 12233 45566666532 1345667777777 77777 77777
Q ss_pred hhHhh
Q 020832 183 SFHFV 187 (321)
Q Consensus 183 ~~Hfl 187 (321)
..++-
T Consensus 130 ~~~~~ 134 (477)
T 1wao_1 130 IAGDE 134 (477)
T ss_dssp -----
T ss_pred hcccc
Confidence 76654
No 183
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=33.48 E-value=1.2e+02 Score=28.99 Aligned_cols=39 Identities=8% Similarity=-0.177 Sum_probs=30.2
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhh
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFV 187 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl 187 (321)
....++|++-. -.++..+..+|.+|.+.+ ++.+|..+|-
T Consensus 60 ~~~~~~al~l~-------p~~~~~~~~lg~~~~~~g---~~~eA~~~~~ 98 (477)
T 1wao_1 60 LGDATRAIELD-------KKYIKGYYRRAASNMALG---KFRAALRDYE 98 (477)
T ss_dssp HHHHHHHHHSC-------TTCHHHHHHHHHHHHHHT---CHHHHHHHHH
T ss_pred HHHHHHHHHhC-------CCCHHHHHHHHHHHHHcC---CHHHHHHHHH
Confidence 45556666431 247889999999999999 9999998875
No 184
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=32.15 E-value=3.2e+02 Score=25.49 Aligned_cols=76 Identities=13% Similarity=0.044 Sum_probs=58.7
Q ss_pred HHHhccCChhHHHHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhCCCCCChhHHHHHH
Q 020832 22 EKIVNEGNFYGAQQMYKSISARYVAAQRYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKGKVAYDNENLDRVR 100 (321)
Q Consensus 22 ~~~i~~G~~YEAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~~~~~~rl~ 100 (321)
-..+..++|=||..++-.-+..+.+.|++..|.||..--...+-+.+.. +..|-..-+++++.. +|.++.++.+++
T Consensus 43 ~Ry~~~k~y~eAidLL~~GA~~ll~~~Q~~sg~DL~~llvevy~~~~~~-~~~~~~~rL~~L~~~--~~~~~p~r~~fi 118 (336)
T 3lpz_A 43 ARYSKQGNWAAAVDILASVSQTLLRSGQGGSGGDLAVLLVDTFRQAGQR-VDGASRGKLLGCLRL--FQPGEPVRKRFV 118 (336)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCC-CCHHHHHHHHHHHTT--SCTTCHHHHHHH
T ss_pred HHHHhhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCC-CCHHHHHHHHHHHHh--CCCCCcHHHHHH
Confidence 3468899999999999999999999999999999998878777777654 334666778888875 455444554444
No 185
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=32.09 E-value=2.1e+02 Score=23.34 Aligned_cols=30 Identities=17% Similarity=0.281 Sum_probs=27.4
Q ss_pred CCCHHHHHHHHHHHHhcCCCCChHHHhhHhhcC
Q 020832 157 TGSPELHVMLAEYLYSESPELDMARVSFHFVRG 189 (321)
Q Consensus 157 ~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~ 189 (321)
.|+|+-+..+|.+|.+.+ ++.+|..+|-.+
T Consensus 15 ~g~~~a~~~lg~~~~~~~---~~~~A~~~~~~a 44 (212)
T 3rjv_A 15 AGDRRAQYYLADTWVSSG---DYQKAEYWAQKA 44 (212)
T ss_dssp TTCHHHHHHHHHHHHHHT---CHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhcCC---CHHHHHHHHHHH
Confidence 489999999999999999 999999998864
No 186
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=31.55 E-value=2e+02 Score=27.03 Aligned_cols=114 Identities=10% Similarity=-0.018 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChh--------------HHHHHHHHHHHHhc
Q 020832 160 PELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGED--------------DLAVARAILMYLSL 225 (321)
Q Consensus 160 p~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~--------------dlfi~RaVL~~L~l 225 (321)
+..+...|..|++.+ +|.+|..+|-.+-.-. |... -......-..|+.+
T Consensus 268 a~~~~~~G~~~~~~g---~~~~A~~~y~~Al~~~--------------p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~ 330 (457)
T 1kt0_A 268 AAIVKEKGTVYFKGG---KYMQAVIQYGKIVSWL--------------EMEYGLSEKESKASESFLLAAFLNLAMCYLKL 330 (457)
T ss_dssp HHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHH--------------TTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCC---CHHHHHHHHHHHHHHh--------------cccccCChHHHHHHHHHHHHHHHHHHHHHHHh
Q ss_pred CChhHHHHHHHHHHHHhhhhccCCCCChhhhHHHHHHHHhccCChhHHHHHHHHhHHhhhcchhHHHHHHHHHHHh
Q 020832 226 GNMKDANYIMDEVKKQVENKQLQLQPSDLIQFVFYVLQTLERDALPLFNMLRANYKASIEREPAFNEMLDDIAEKF 301 (321)
Q Consensus 226 ~n~~~A~~~~~~f~~~~~~~~~~~~~~PlLnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l~rd~~~~~~L~~Ig~~y 301 (321)
++...|...++...+..+. |.--+.-++.-.-...-|..-...|+..++.+|........++.+|
T Consensus 331 g~~~~A~~~~~~al~~~p~-----------~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~ 395 (457)
T 1kt0_A 331 REYTKAVECCDKALGLDSA-----------NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQ 395 (457)
T ss_dssp TCHHHHHHHHHHHHHHSTT-----------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCCc-----------cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
No 187
>2fvh_A Urease gamma subunit; protein: UREA homolog, structural genomics, PSI, protein STR initiative, TB structural genomics consortium; 1.80A {Mycobacterium tuberculosis}
Probab=31.05 E-value=79 Score=25.26 Aligned_cols=44 Identities=23% Similarity=0.143 Sum_probs=32.5
Q ss_pred HHHHHhhhh---CHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHh
Q 020832 40 ISARYVAAQ---RYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALV 85 (321)
Q Consensus 40 l~~Ry~~~~---k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~ 85 (321)
++.|-..+| +|.||+.++..-.....+.|. +-+||..+=-++|.
T Consensus 39 LA~rR~aRGlkLN~pEAvAlIs~~ilE~aRDG~--sVAeLM~~G~~vL~ 85 (120)
T 2fvh_A 39 LARRRRARGLRLNHPEAIAVIADHILEGARDGR--TVAELMASGREVLG 85 (120)
T ss_dssp HHHHHHHTTCCBCHHHHHHHHHHHHHHHHHHTC--CHHHHHHHTTSSSC
T ss_pred HHHHHHHcccccCcHHHHHHHHHHHHHHhHcCC--CHHHHHHHhhhhcC
Confidence 344555555 899999999999999999988 78888654444443
No 188
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=30.19 E-value=82 Score=28.34 Aligned_cols=62 Identities=16% Similarity=0.065 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHHHHHHHH
Q 020832 161 ELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYIMDEVKK 240 (321)
Q Consensus 161 ~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f~~ 240 (321)
.+|..+|.+|.+.+ +|.+|..+|-.+ | +..|.....+..++. .|+.+++...|...|....+
T Consensus 231 ~~~~nla~~~~~~g---~~~~A~~~~~~a---------l-----~~~p~~~~a~~~lg~-a~~~~g~~~~A~~~l~~al~ 292 (338)
T 2if4_A 231 PCHLNIAACLIKLK---RYDEAIGHCNIV---------L-----TEEEKNPKALFRRGK-AKAELGQMDSARDDFRKAQK 292 (338)
T ss_dssp HHHHHHHHHHHTTT---CCHHHHHHHHHH---------H-----HHCTTCHHHHHHHHH-HHHTTTCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcC---CHHHHHHHHHHH---------H-----HhCCCCHHHHHHHHH-HHHHcCCHHHHHHHHHHHHH
Confidence 37888999999999 999998776321 1 112344444555554 46889999999998776554
No 189
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=29.89 E-value=3.4e+02 Score=25.11 Aligned_cols=28 Identities=14% Similarity=-0.004 Sum_probs=19.2
Q ss_pred CCHHHHHHHHHHHHh----cCCCCChHHHhhHhhc
Q 020832 158 GSPELHVMLAEYLYS----ESPELDMARVSFHFVR 188 (321)
Q Consensus 158 Gdp~LH~~la~~~~~----e~~~~~~~~A~~Hfl~ 188 (321)
|++.-+..+|.+|.. .+ ++.+|..+|-.
T Consensus 181 ~~~~a~~~Lg~~y~~g~g~~~---~~~~A~~~~~~ 212 (490)
T 2xm6_A 181 GNVWSCNQLGYMYSRGLGVER---NDAISAQWYRK 212 (490)
T ss_dssp TCHHHHHHHHHHHHHTSSSCC---CHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhcCCCCCc---CHHHHHHHHHH
Confidence 677777777777776 55 67777666653
No 190
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=28.64 E-value=2.4e+02 Score=22.93 Aligned_cols=51 Identities=10% Similarity=0.004 Sum_probs=34.3
Q ss_pred ChhHHHHHHHHHHhccCC--hhHHHHHHHHHHHHHhhhhCHHHHHHHHHHHHH
Q 020832 12 PPAQENIDKLEKIVNEGN--FYGAQQMYKSISARYVAAQRYSEALDLLHAGAC 62 (321)
Q Consensus 12 ~~~~r~l~rl~~~i~~G~--~YEAhQ~~RTl~~Ry~~~~k~~eAi~lL~~ga~ 62 (321)
...++.+..+++.++.+. --.--..+..+..-|...+++++|++.+.++..
T Consensus 19 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 71 (275)
T 1xnf_A 19 LQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALA 71 (275)
T ss_dssp HHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 356677777777777531 122334566777778888999999888776543
No 191
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=28.59 E-value=45 Score=24.08 Aligned_cols=39 Identities=18% Similarity=0.166 Sum_probs=29.5
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhh
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFV 187 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl 187 (321)
...+++|++-. -.++..+..+|.+|...| ++.+|..+|-
T Consensus 39 ~~~~~~al~~~-------p~~~~~~~~la~~~~~~g---~~~~A~~~~~ 77 (115)
T 2kat_A 39 LPHLRAALDFD-------PTYSVAWKWLGKTLQGQG---DRAGARQAWE 77 (115)
T ss_dssp HHHHHHHHHHC-------TTCHHHHHHHHHHHHHHT---CHHHHHHHHH
T ss_pred HHHHHHHHHHC-------CCcHHHHHHHHHHHHHcC---CHHHHHHHHH
Confidence 45556666421 246889999999999999 9999997765
No 192
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=27.87 E-value=2.8e+02 Score=23.50 Aligned_cols=104 Identities=22% Similarity=0.304 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHH-----hcCChhHHHHHH
Q 020832 161 ELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYL-----SLGNMKDANYIM 235 (321)
Q Consensus 161 ~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L-----~l~n~~~A~~~~ 235 (321)
..+-.+|++++-++ +|.+|+.||..+ | ..|++.-. =--|.||.|| .+|.+... .++
T Consensus 15 ~Y~YYlGr~~~~~~---~y~~A~~~L~~A------------~-~~~~~~~~--~~k~~IL~yLIp~~Ll~G~iP~~-~ll 75 (203)
T 3t5x_A 15 TYKYYVGRKAMFDS---DFKQAEEYLSFA------------F-EHCHRSSQ--KNKRMILIYLLPVKMLLGHMPTV-ELL 75 (203)
T ss_dssp HHHHHHHHHHHHTT---CHHHHHHHHHHH------------H-HHSCTTCH--HHHHHHHHHHHHHHHHTTCEECH-HHH
T ss_pred HHHHHHHHHHHHHh---CHHHHHHHHHHH------------H-HHCCHhHH--HHHHHHHHHHHHHHHHcCCCCCH-HHh
Confidence 46788999999999 999999887532 1 12322111 1234455554 34665532 222
Q ss_pred HHHHHHhhhhccCCCCChhhhHHHHHHHHhccCChhHHHHHHHHhHHhhhcchhHHHHHHHHHH
Q 020832 236 DEVKKQVENKQLQLQPSDLIQFVFYVLQTLERDALPLFNMLRANYKASIEREPAFNEMLDDIAE 299 (321)
Q Consensus 236 ~~f~~~~~~~~~~~~~~PlLnF~~lLl~t~e~~~~~~F~~L~~~Y~~~l~rd~~~~~~L~~Ig~ 299 (321)
..| ++..|. -|+.++.+++...|....++++..+.+|-.+ -.++++..
T Consensus 76 ~~~--------------~~~~y~-~L~~Avr~Gdl~~f~~~l~~~~~~f~~~~~~-lll~rlr~ 123 (203)
T 3t5x_A 76 KKY--------------HLMQFA-EVTRAVSEGNLLLLHEALAKHEAFFIRCGIF-LILEKLKI 123 (203)
T ss_dssp HHT--------------TCGGGH-HHHHHHHHTCHHHHHHHHHHTHHHHHHHTCH-HHHHTHHH
T ss_pred hhC--------------chhHHH-HHHHHHHhCCHHHHHHHHHHhHHHHHHCChH-HHHHHHHH
Confidence 211 112243 3678999999999999999999988777544 33444444
No 193
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=26.47 E-value=1.5e+02 Score=21.47 Aligned_cols=54 Identities=9% Similarity=0.089 Sum_probs=30.7
Q ss_pred HHhccCChhHHHHHHHHHHHHHhhhhCH-HHHHHHHHHHHHHHHHCCCcchHHHH
Q 020832 23 KIVNEGNFYGAQQMYKSISARYVAAQRY-SEALDLLHAGACLQLKNNQLTCGAEL 76 (321)
Q Consensus 23 ~~i~~G~~YEAhQ~~RTl~~Ry~~~~k~-~eAi~lL~~ga~~ll~~~Q~~s~~DL 76 (321)
...+.|+|+.|.+-|+....|+...... ..-.+++..-+..+.+.|++..|.++
T Consensus 14 ~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~ 68 (104)
T 2v5f_A 14 VAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLL 68 (104)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHH
Confidence 4556677777777777777666432110 11235555556666666666555444
No 194
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=26.14 E-value=3.1e+02 Score=23.50 Aligned_cols=144 Identities=15% Similarity=0.133 Sum_probs=82.1
Q ss_pred hHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhcCCCCChHHHhhHhhc--CCC---hH----HHHHHHHH--------
Q 020832 139 SSFLKAAIKWSIEFGAPKTGSPELHVMLAEYLYSESPELDMARVSFHFVR--GNN---PE----KFASTIVN-------- 201 (321)
Q Consensus 139 ~~fl~~ai~WS~~~g~~~~Gdp~LH~~la~~~~~e~~~~~~~~A~~Hfl~--~~~---~~----~~a~~L~e-------- 201 (321)
....++|++= ..-+++.+|..+|..+.+.+ ++.+|+..|-. ..+ ++ .++.++..
T Consensus 84 ~~~~~rAl~~------~~p~~~~~~~~~~~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~ 154 (308)
T 2ond_A 84 ANIYERAIST------LLKKNMLLYFAYADYEESRM---KYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGR 154 (308)
T ss_dssp HHHHHHHHTT------TTTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHH------hCcccHHHHHHHHHHHHhcC---CHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHH
Confidence 5566666641 01257889999999999999 99999887753 222 22 22222221
Q ss_pred -Hhh---ccCCChhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHhhhhccCCCCChhhhHHHHHHHHhccCChhHHHHHH
Q 020832 202 -FMG---KCYPGEDDLAVARAILMYLSLGNMKDANYIMDEVKKQVENKQLQLQPSDLIQFVFYVLQTLERDALPLFNMLR 277 (321)
Q Consensus 202 -w~~---~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f~~~~~~~~~~~~~~PlLnF~~lLl~t~e~~~~~~F~~L~ 277 (321)
.+. +..|...++++..+.+.+.+.|+...|...|+.-++..|. ...-+++++.++. ..+. +....
T Consensus 155 ~~~~~a~~~~p~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~-----~~~~~~~~~~~~~---~~g~---~~~A~ 223 (308)
T 2ond_A 155 MIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGD-----IPEYVLAYIDYLS---HLNE---DNNTR 223 (308)
T ss_dssp HHHHHHHTSTTCCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTT-----CHHHHHHHHHHHH---TTCC---HHHHH
T ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-----cHHHHHHHHHHHH---HCCC---HHHHH
Confidence 111 2234456677777777666788999998888777664431 1122233333332 2233 34456
Q ss_pred HHhHHhhhc---chh-HHHHHHHHHHHhc
Q 020832 278 ANYKASIER---EPA-FNEMLDDIAEKFF 302 (321)
Q Consensus 278 ~~Y~~~l~r---d~~-~~~~L~~Ig~~yF 302 (321)
..|...+.. +|. -.......+..+.
T Consensus 224 ~~~~~al~~~~l~p~~~~~l~~~~~~~~~ 252 (308)
T 2ond_A 224 VLFERVLTSGSLPPEKSGEIWARFLAFES 252 (308)
T ss_dssp HHHHHHHHSSSSCGGGCHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCHHHHHHHHHHHHHHHH
Confidence 667777764 443 4445555555443
No 195
>4fur_A Urease subunit gamma 2; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Brucella melitensis biovar abortus}
Probab=25.88 E-value=82 Score=24.57 Aligned_cols=46 Identities=13% Similarity=0.037 Sum_probs=34.1
Q ss_pred HHHHHhhhh---CHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhC
Q 020832 40 ISARYVAAQ---RYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKG 87 (321)
Q Consensus 40 l~~Ry~~~~---k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~ 87 (321)
++.|-..+| +|.||+.++.+......+.|. +-+||+.+=-.++...
T Consensus 23 lA~rR~~RGlkLN~pEAvAlIs~~v~E~aRdG~--sVaelM~~g~~~L~~~ 71 (104)
T 4fur_A 23 VALKRKNKGLKLNHPEAVAVLSAYVLDGAREGK--TVEEVMDGARSVLKAD 71 (104)
T ss_dssp HHHHHHHTTCCBCHHHHHHHHHHHHHHHHHTTC--CHHHHHHHHTTTSCGG
T ss_pred HHHHHHHcCcccCcHHHHHHHHHHHHHHHHCCC--CHHHHHHHHhhhCCHH
Confidence 344445555 899999999999999999885 7888876655555444
No 196
>4ep8_A Urease subunit gamma; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_A 1a5k_A 1a5n_A 1a5o_A 1ef2_C* 1ejr_A* 1ejs_A* 1ejt_A* 1eju_A* 1ejv_A* 1a5m_A* 1ejw_A* 1fwa_A* 1fwb_A* 1fwc_A* 1fwd_A* 1fwe_A* 1fwf_A* 1fwg_A* 1fwh_A* ...
Probab=25.81 E-value=1.2e+02 Score=23.51 Aligned_cols=46 Identities=20% Similarity=0.208 Sum_probs=33.3
Q ss_pred HHHHHhhhh---CHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhC
Q 020832 40 ISARYVAAQ---RYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKG 87 (321)
Q Consensus 40 l~~Ry~~~~---k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~ 87 (321)
++.|-..+| +|.||+.++.+......+.|. +-+||..+=-.++...
T Consensus 19 lA~rR~~RGlkLN~pEAvAlIs~~v~E~aRdG~--sVaelm~~g~~~L~~~ 67 (100)
T 4ep8_A 19 VAERRLARGLKLNYPESVALISAFIMEGARDGK--SVASLMEEGRHVLTRE 67 (100)
T ss_dssp HHHHHHHTTCCBCHHHHHHHHHHHHHHHHHHTC--CHHHHHHHGGGSCCGG
T ss_pred HHHHHHHcCcccCcHHHHHHHHHHHHHHHhcCC--CHHHHHHHHhhhcCHH
Confidence 344555555 899999999999999999886 7788865544444433
No 197
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=24.82 E-value=64 Score=33.32 Aligned_cols=125 Identities=14% Similarity=0.095 Sum_probs=61.5
Q ss_pred hCCCCCChhHHHHHHHHHHhCCCCCCCCCCCCCchhHHHHHHHhhhhhhhhhhhHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 020832 86 KGKVAYDNENLDRVRKIYELFPQIPVPHNLEDDDDLHELTEALGAAKLRVEGCSSFLKAAIKWSIEFGAPKTGSPELHVM 165 (321)
Q Consensus 86 ~~~~~~~~~~~~rl~~l~~~~p~~~~~r~l~~~~~~~~~~e~~~~~~~~~~~~~~fl~~ai~WS~~~g~~~~Gdp~LH~~ 165 (321)
....+++.+..++|..|++..|+.. .|+.++ .+-+=+-..--...-+...+|+. ++.|+.... -.+.+.+
T Consensus 31 d~~lkP~~~~r~~L~~i~~r~~p~~---~Lt~ee-k~llWk~R~~l~~~~~aL~kfL~-sv~W~~~~e-----~~~a~~l 100 (696)
T 2x6h_A 31 DRDAKPTASIRDQLHTIVYRYPPTY---VLSSEE-QDLVWKFRFYLSSHKKALTKFLK-CINWKLEDE-----VTQALWM 100 (696)
T ss_dssp -------CTTHHHHHHHHHHSCSSC---CCCSSH-HHHHHHHHTTCCCCHHHHHHHGG-GTTTSCHHH-----HHHHHHH
T ss_pred CccCCCCHHHHHHHHHHHhcCCCCC---cCCHHH-HHHHHHhHHHHhhChhHHHHHHh-hCCCCCHHH-----HHHHHHH
Confidence 3456788888999999999777665 443332 11110000000000112267776 678885322 1245555
Q ss_pred HHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcC
Q 020832 166 LAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLG 226 (321)
Q Consensus 166 la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~ 226 (321)
+.. |..- +...|..-|=-.=.....=.+-++|..+....|--+|+.+-| |-|--.
T Consensus 101 L~~--W~~~---~~~dALeLL~~~f~~~~VR~yAV~~L~~~~de~L~~YLlQLV-QALKyE 155 (696)
T 2x6h_A 101 LAN--WAPM---DVEDALELLSPTFTHPQVRKYAVSRLAQAPDEDLLLYLLQLV-QALKYE 155 (696)
T ss_dssp HHH--SCCC---CHHHHHHHHSTTCCCHHHHHHHHHHHHHSCHHHHHHHHHHHH-HHGGGS
T ss_pred Hhc--CCCC---CHHHHHHHhcccCCCHHHHHHHHHHHHhCChHHHHHHHHHHH-HHHHhc
Confidence 543 6555 777776544221112234455577777765566666777766 334444
No 198
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=24.57 E-value=1.8e+02 Score=31.79 Aligned_cols=69 Identities=9% Similarity=-0.079 Sum_probs=50.0
Q ss_pred hHH-HHHHHHHHHHHhhhhCHHHHHHHHHHH------------------HHHHHHCCCcchHHHHHHHHHHHHhhCCCCC
Q 020832 31 YGA-QQMYKSISARYVAAQRYSEALDLLHAG------------------ACLQLKNNQLTCGAELAVSFVEALVKGKVAY 91 (321)
Q Consensus 31 YEA-hQ~~RTl~~Ry~~~~k~~eAi~lL~~g------------------a~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~ 91 (321)
|++ ||+|.|+..=|.+.|+.++|.+++..- ..-+-++|....|.+|- +-..+.|+.+
T Consensus 123 ~~~~~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf----~eM~~~G~~P 198 (1134)
T 3spa_A 123 LSGQQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVL----FMVKDAGLTP 198 (1134)
T ss_dssp CCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHH----HHHHHTTCCC
T ss_pred HHhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHH----HHHHHcCCCC
Confidence 444 558999999999999999999998431 12255788887777764 4446788888
Q ss_pred ChhHHHHHHHHH
Q 020832 92 DNENLDRVRKIY 103 (321)
Q Consensus 92 ~~~~~~rl~~l~ 103 (321)
|.-+.+-|+.-+
T Consensus 199 DvvTYntLI~gl 210 (1134)
T 3spa_A 199 DLLSYAAALQCM 210 (1134)
T ss_dssp CHHHHHHHHHHH
T ss_pred cHHHHHHHHHHH
Confidence 876666555544
No 199
>1b79_A DNAB helicase; hexamer, DNA replication, hydrolase; 2.30A {Escherichia coli} SCOP: a.81.1.1 PDB: 1jwe_A
Probab=23.71 E-value=2e+02 Score=22.17 Aligned_cols=27 Identities=19% Similarity=0.208 Sum_probs=12.4
Q ss_pred HHhccCChh-HHHHHHHHHHHHHhhhhC
Q 020832 23 KIVNEGNFY-GAQQMYKSISARYVAAQR 49 (321)
Q Consensus 23 ~~i~~G~~Y-EAhQ~~RTl~~Ry~~~~k 49 (321)
..+...+|| ++||.+=........+++
T Consensus 43 ~~L~~edFy~~~H~~If~ai~~L~~~g~ 70 (119)
T 1b79_A 43 ERVVADDFYTRPHRHIFTEMARLQESGS 70 (119)
T ss_dssp TTCCGGGSSSHHHHHHHHHHHHHHHTTC
T ss_pred hhCCHHHCCcHHHHHHHHHHHHHHHcCC
Confidence 345566666 345543333333334433
No 200
>1mba_A Myoglobin; oxygen storage; HET: HEM; 1.60A {Aplysia limacina} SCOP: a.1.1.2 PDB: 2fal_A* 3mba_A* 4mba_A* 5mba_A* 2fam_A* 1dm1_A*
Probab=21.80 E-value=2.5e+02 Score=21.87 Aligned_cols=89 Identities=7% Similarity=0.060 Sum_probs=52.1
Q ss_pred ChhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHhhhhccCCCCChhhhHHHHHHHHhccCC-----h-hHHHHHHHHhHH
Q 020832 209 GEDDLAVARAILMYLSLGNMKDANYIMDEVKKQVENKQLQLQPSDLIQFVFYVLQTLERDA-----L-PLFNMLRANYKA 282 (321)
Q Consensus 209 ~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f~~~~~~~~~~~~~~PlLnF~~lLl~t~e~~~-----~-~~F~~L~~~Y~~ 282 (321)
++.+.-+.|....-+.-.....+..+|..+.+.+|.....|+...-++- ..+.... . .++. -...+-.
T Consensus 4 t~~~~~~v~~sw~~v~~~~~~~g~~~~~rlF~~~P~~k~~F~~~~~~~~-----~~l~~~~~~~~h~~~v~~-~l~~~v~ 77 (147)
T 1mba_A 4 SAAEADLAGKSWAPVFANKNANGLDFLVALFEKFPDSANFFADFKGKSV-----ADIKASPKLRDVSSRIFT-RLNEFVN 77 (147)
T ss_dssp CHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCGGGGGGCTTTTTCCH-----HHHHTCTTHHHHHHHHHH-HHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcHHHhHHHHHHHHHHhCchHHHhhHhhcCCCH-----HHHhcCHHHHHHHHHHHH-HHHHHHH
Confidence 3455667788888777666678888888888888877665543211110 1111110 0 1222 2244555
Q ss_pred hhhcchhHHHHHHHHHHHhcC
Q 020832 283 SIEREPAFNEMLDDIAEKFFG 303 (321)
Q Consensus 283 ~l~rd~~~~~~L~~Ig~~yFg 303 (321)
.|+..+.+..+|.+||+.+-.
T Consensus 78 ~ld~~~~l~~~l~~L~~~H~~ 98 (147)
T 1mba_A 78 NAANAGKMSAMLSQFAKEHVG 98 (147)
T ss_dssp HTTCHHHHHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHhhc
Confidence 565556778888888887763
No 201
>4ac7_A Urease subunit gamma; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_A* 1ie7_A* 1ubp_A* 4ubp_A* 3ubp_A* 2ubp_A* 4ep8_A* 1a5l_A 1a5k_A 1a5n_A 1a5o_A 1ef2_C* 1ejr_A* 1ejs_A* 1ejt_A* 1eju_A* 1ejv_A* 1a5m_A* 1ejw_A* 1fwa_A* ...
Probab=21.69 E-value=1.5e+02 Score=22.92 Aligned_cols=45 Identities=18% Similarity=0.100 Sum_probs=31.9
Q ss_pred HHHHhhhh---CHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHhhC
Q 020832 41 SARYVAAQ---RYSEALDLLHAGACLQLKNNQLTCGAELAVSFVEALVKG 87 (321)
Q Consensus 41 ~~Ry~~~~---k~~eAi~lL~~ga~~ll~~~Q~~s~~DL~~~lvev~~~~ 87 (321)
+.|-..+| +|.||+.++..-.....+.| .+-+||..+=-.++...
T Consensus 20 A~rR~arGlkLN~pEAvAlI~~~ilE~aRdG--~sVaelm~~g~~~L~r~ 67 (100)
T 4ac7_A 20 LLRRKARGLKLNYPEAVAIITSFIMEGARDG--KTVAMLMEEGKHVLTRD 67 (100)
T ss_dssp HHHHHHTTCCBCHHHHHHHHHHHHHHHHHHT--CCHHHHHHHGGGSCCGG
T ss_pred HHHHHHcccccccHHHHHHHHHHHHHHHHCC--CCHHHHHHHhcccCCHH
Confidence 34444444 89999999999888888888 38888865544444433
No 202
>2p9x_A Hypothetical protein PH0832; pyrococcus horikoshii OT3, NPPSFA, national project on prote structural and functional analyses; 1.65A {Pyrococcus horikoshii}
Probab=21.56 E-value=1e+02 Score=23.66 Aligned_cols=38 Identities=8% Similarity=0.103 Sum_probs=26.4
Q ss_pred CCcchHHHHHHHHHHHHh-hCCCCCChhHHHHHHHHHHhC
Q 020832 68 NQLTCGAELAVSFVEALV-KGKVAYDNENLDRVRKIYELF 106 (321)
Q Consensus 68 ~Q~~s~~DL~~~lvev~~-~~~~~~~~~~~~rl~~l~~~~ 106 (321)
|++ ||.=|-+.++.-+. .-+.+++...++.++++++.+
T Consensus 58 GEy-sarllem~i~~~~~~~L~l~~~~~~lE~lve~lkk~ 96 (99)
T 2p9x_A 58 GEY-SARLLEMVIISKLKGRLGEDIEANSLEELVSEIRKI 96 (99)
T ss_dssp CHH-HHHHHHHHHHHHHHHHSCTTCCCSSHHHHHHHHHHH
T ss_pred HHH-HHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHH
Confidence 445 55545556665555 778899988899888888743
No 203
>2lbf_A 60S acidic ribosomal protein P1; ribosome, stalk, P1/P2; NMR {Homo sapiens}
Probab=21.19 E-value=97 Score=22.19 Aligned_cols=40 Identities=8% Similarity=-0.048 Sum_probs=30.1
Q ss_pred HHHHHHCCCcchHHHHHHHHHHHHhhCCCCCChhHHHHHHHHHH
Q 020832 61 ACLQLKNNQLTCGAELAVSFVEALVKGKVAYDNENLDRVRKIYE 104 (321)
Q Consensus 61 a~~ll~~~Q~~s~~DL~~~lvev~~~~~~~~~~~~~~rl~~l~~ 104 (321)
|.+|...|.--++-|+ -.+++..++++++.|...++..++
T Consensus 13 AllL~~~g~~~ta~~I----~~il~AaGveve~~~~~lf~~aL~ 52 (69)
T 2lbf_A 13 ALILHDDEVTVTEDKI----NALIKAAGVNVEPFWPGLFAKALA 52 (69)
T ss_dssp HHHHHHHTCCCCHHHH----HHHHHHHTCCCCTHHHHHHHHHTT
T ss_pred HHHHHcCCCCCCHHHH----HHHHHHcCCCccHHHHHHHHHHHC
Confidence 3444455766677777 567799999999999998887765
No 204
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=20.35 E-value=2.5e+02 Score=20.87 Aligned_cols=22 Identities=32% Similarity=0.404 Sum_probs=13.7
Q ss_pred hhhhCHHHHHHHHHHHHHHHHH
Q 020832 45 VAAQRYSEALDLLHAGACLQLK 66 (321)
Q Consensus 45 ~~~~k~~eAi~lL~~ga~~ll~ 66 (321)
=+.++|++|+.+-.+|+..|+.
T Consensus 26 D~~g~y~eAl~~Y~~Aie~l~~ 47 (93)
T 1wfd_A 26 DAESRYQQALVCYQEGIDMLLQ 47 (93)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHHHH
Confidence 4456777777776665555544
No 205
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=20.34 E-value=2.9e+02 Score=21.03 Aligned_cols=64 Identities=11% Similarity=-0.084 Sum_probs=44.9
Q ss_pred CHHHHHHHHHHHHhcCCCCChHHHhhHhhcCCChHHHHHHHHHHhhccCCChhHHHHHHHHHHHHhcCChhHHHHHHHHH
Q 020832 159 SPELHVMLAEYLYSESPELDMARVSFHFVRGNNPEKFASTIVNFMGKCYPGEDDLAVARAILMYLSLGNMKDANYIMDEV 238 (321)
Q Consensus 159 dp~LH~~la~~~~~e~~~~~~~~A~~Hfl~~~~~~~~a~~L~ew~~~~~~~e~dlfi~RaVL~~L~l~n~~~A~~~~~~f 238 (321)
+++.+..+|..+...| ++.+|..+|-.. ..-.|...+.+..+++. |...|+...|...|+.-
T Consensus 20 ~~~~~~~~g~~~~~~g---~~~~A~~~~~~a--------------l~~~p~~~~~~~~lg~~-~~~~g~~~~A~~~~~~a 81 (148)
T 2vgx_A 20 TLEQLYSLAFNQYQSG---XYEDAHXVFQAL--------------CVLDHYDSRFFLGLGAC-RQAMGQYDLAIHSYSYG 81 (148)
T ss_dssp HHHHHHHHHHHHHHTT---CHHHHHHHHHHH--------------HHHCTTCHHHHHHHHHH-HHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcC---ChHHHHHHHHHH--------------HHcCcccHHHHHHHHHH-HHHHhhHHHHHHHHHHH
Confidence 5678889999999999 999998776421 11234555556655553 45778888888887766
Q ss_pred HH
Q 020832 239 KK 240 (321)
Q Consensus 239 ~~ 240 (321)
.+
T Consensus 82 l~ 83 (148)
T 2vgx_A 82 AV 83 (148)
T ss_dssp HH
T ss_pred Hh
Confidence 55
Done!