BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020834
(321 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O14197|YDQ4_SCHPO Uncharacterized transporter C5D6.04 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC5D6.04 PE=3 SV=1
Length = 452
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 139/329 (42%), Gaps = 48/329 (14%)
Query: 11 NIGNVPLVLIAALCRDPSN------PFAEPETCSTQMTAYISFGQWVGAIILYTYVFHML 64
N ++PL L+++L + P P+ +++ Y+ +G + ++Y + +L
Sbjct: 122 NSNSLPLALVSSLATTVKDLLWDKIPDDTPDKVASRGIMYLLIFSQLGQALRWSYGYRIL 181
Query: 65 APPPEGTFDIDEESLPIKNSSKDATPA-PEQIPLLTEEAEPKD--SNNPKRGKDATPATE 121
P + E+ LPI N S + E+I L + D N+ + + +T T+
Sbjct: 182 LSPNQ-----PEDPLPIGNRSWSHSDVNEEEIQNLLASSANVDGVQNSVQANEGSTVQTD 236
Query: 122 QIPLLIEEAEPKDSKNPKRG-------KIAEVLIFIYEKLKLKQILQPPIIASILAMGIG 174
+ + ++ N + G KI++ ++ + + PP+ + +A+ I
Sbjct: 237 SSAISKNDNVQVETSNEEVGGFGAASSKISKFIVLLLD------FFSPPLYSLFIALFIA 290
Query: 175 AVPFLKKLIFTDDAPLFFFTDSCI-----ILGEAMIPCILLALGGNLVDG-----PGSAK 224
VP L++ F + + F + I + G+ +P IL+ LG +L P
Sbjct: 291 VVPPLQRFFFEEGS----FVEGSITSGIRMAGQVAVPMILVVLGASLATDISKTEPTQEV 346
Query: 225 LGFRTTAAII---FGRLVLVPPAGLGIVTLADKLGFIPA-GDKMFKFVLLLQHTMPTSVL 280
T II GR+V+VP A L +L I D +F V+ L PT++
Sbjct: 347 RKNNDTRVIIVCLLGRMVVVPLALLPAFSLLSYFSEISTVDDPVFVVVIFLLVGSPTAIQ 406
Query: 281 SGAVSSLRGC-GREAAAVLFWVHIFAVFS 308
+ L G RE A VL+W +AVF+
Sbjct: 407 LTQICQLNGVFERECAKVLWWS--YAVFT 433
>sp|Q99252|ECM3_YEAST Protein ECM3 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=ECM3 PE=1 SV=1
Length = 613
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 23/141 (16%)
Query: 156 LKQILQPPIIASILAMGIGAVPFLKKLIFT-----------DDAP-LFFFTDSCIILGEA 203
LK L+P +A ILA+ I +P++K L T D+AP L F D +G A
Sbjct: 423 LKNCLRPCSMAVILALIIAFIPWVKALFVTTSNTPKIKQAPDNAPALTFIMDFTSYVGAA 482
Query: 204 MIPCILLALGGNLVDGPGSAKLG------FRTTAAIIFGRLVLVPPAGLGIVTLADKLGF 257
+P L+ LG L G K+G +++ ++F R ++P G+ K G+
Sbjct: 483 SVPFGLILLGATL----GRLKIGKLYPGFWKSAVVLVFLRQCIMPIFGVLWCDRLVKAGW 538
Query: 258 IP-AGDKMFKFVLLLQHTMPT 277
+ DKM FV + +PT
Sbjct: 539 LNWENDKMLLFVTAITWNLPT 559
>sp|P53932|YNJ5_YEAST Uncharacterized transporter YNL095C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YNL095C PE=1 SV=1
Length = 642
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 23/141 (16%)
Query: 156 LKQILQPPIIASILAMGIGAVPFLKKLIFT-----------DDA-PLFFFTDSCIILGEA 203
LK L+P +A I+A+ + +P++K L T D+A PL FF D +G A
Sbjct: 452 LKNCLRPCSMAVIIALTVAFIPWVKALFVTTANTPHISQAPDNAPPLSFFMDFTGYVGAA 511
Query: 204 MIPCILLALGGNLVDGPGSAKLG------FRTTAAIIFGRLVLVPPAGLGIVTLADKLGF 257
+P L+ LG L G K+G ++ ++ R ++P G+ K G+
Sbjct: 512 CVPFGLILLGATL----GRLKIGNLYPGFWKAAVTLVILRQCVMPIFGVLWCDRLVKAGW 567
Query: 258 IP-AGDKMFKFVLLLQHTMPT 277
+ D+M FV+ + +PT
Sbjct: 568 VNWQDDRMLLFVIAISWNLPT 588
>sp|Q62415|ASPP1_MOUSE Apoptosis-stimulating of p53 protein 1 OS=Mus musculus GN=Ppp1r13b
PE=1 SV=2
Length = 1087
Score = 38.5 bits (88), Expect = 0.062, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 67 PPEGTFDIDEESLPIKNSSKDATPAPEQIPLLT-----EEAEPKDSNNPKRGKDATPATE 121
PP T + EE P +++ + P+PE L+ + AEP + NN P+TE
Sbjct: 772 PPRPTAPLPEELAPSSDANDNELPSPEPEELICPQTTHQTAEPTEDNNNNVA--PVPSTE 829
Query: 122 QIPLLIEEAEPKDSKNP 138
QIP + EA ++ + P
Sbjct: 830 QIPSPVAEAPSEEDQVP 846
>sp|P12036|NFH_HUMAN Neurofilament heavy polypeptide OS=Homo sapiens GN=NEFH PE=1 SV=4
Length = 1026
Score = 38.1 bits (87), Expect = 0.086, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 65 APPPEGTFDIDEESLP--IKNSSKDATPAPEQIPLLTEEAEPKDSNNPKRGKDATPATEQ 122
+PP + + +E P +K+ K +PA E+ E P+ + +P + + +PA +
Sbjct: 560 SPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAK 619
Query: 123 IPLLIEEAEPKDSKNPKRGK 142
P+ E P + K+P++ K
Sbjct: 620 SPVKEEAKSPAEVKSPEKAK 639
Score = 35.8 bits (81), Expect = 0.40, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 80 PIKNSSKDATPAPEQIPLLTEEAEPKDSNNPKRGKDATPATEQIPLLIEEAEPKDSKNPK 139
P+K +K +P + P+ E P+ + +P + + TP + P+ E P+ +K+P+
Sbjct: 703 PVKEEAK--SPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPE 760
Query: 140 RGKIAEV 146
+ K +V
Sbjct: 761 KAKTLDV 767
>sp|Q96KQ4|ASPP1_HUMAN Apoptosis-stimulating of p53 protein 1 OS=Homo sapiens GN=PPP1R13B
PE=1 SV=3
Length = 1090
Score = 35.8 bits (81), Expect = 0.47, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Query: 66 PPPEGTFDIDEESLPIKNSSKDATPAPEQIPLLT-----EEAEPKDSNNPKRGKDATPAT 120
PP + T + E P +++ + P+PE L+ + AEP + NN P T
Sbjct: 773 PPAQPTAPLPAEPAPSSDANDNELPSPEPEELICPQTTHQTAEPAEDNNNNVA--TVPTT 830
Query: 121 EQIPLLIEEA-EPKDSKNP 138
EQIP + EA P + + P
Sbjct: 831 EQIPSPVAEAPSPGEEQVP 849
>sp|P80544|PLS_STAAU Surface protein OS=Staphylococcus aureus GN=pls PE=1 SV=2
Length = 1637
Score = 35.0 bits (79), Expect = 0.66, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 5/79 (6%)
Query: 65 APPPEGTFDIDEESLPIKNSSKDAT----PAPEQIPLLTEEAEPKDSNNPKRGKDATPAT 120
AP EGT ++ E P + AT P E+ TEEA PK K + PA
Sbjct: 128 APKAEGTDKVETEEAPKAEETDKATTEEAPKAEETDKATEEA-PKTEETDKATTEEAPAA 186
Query: 121 EQIPLLIEEAEPKDSKNPK 139
E+ E PK + K
Sbjct: 187 EETSKAATEEAPKAEETSK 205
>sp|Q2EG98|PK1L3_MOUSE Polycystic kidney disease protein 1-like 3 OS=Mus musculus
GN=Pkd1l3 PE=2 SV=2
Length = 2201
Score = 34.7 bits (78), Expect = 1.1, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 65 APPPEGTFDIDEESLPIKNSSKDATPAPEQIPLLTEEAEPKDSNNPKRGKDATPATEQIP 124
+ PP+GT D S P + +S TPA P T E SN+P +G TP P
Sbjct: 354 SSPPQGTLDTPSSSSPPQGTSD--TPASSSPPQGTSETPA--SNSPPQGTSETPGFSSPP 409
>sp|C5C3P2|DNAK_BEUC1 Chaperone protein DnaK OS=Beutenbergia cavernae (strain ATCC BAA-8
/ DSM 12333 / NBRC 16432) GN=dnaK PE=3 SV=1
Length = 628
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 27/111 (24%)
Query: 56 LYTYVFHMLAPPPEG------TFDIDEESLPIKNSSKDATPAPEQIPLLTEEAEPKDSNN 109
L T+ +AP P G TFDID + + S+KD EQ +T
Sbjct: 432 LGTFELTGIAPAPRGMPQIEVTFDIDANGI-VHVSAKDRGTGKEQSMTIT---------- 480
Query: 110 PKRGKDATPATEQIPLLIEEAEPKDSKNPKRGKIAEV------LIFIYEKL 154
G A P E I +I+EAE +++ KR + AEV L++ EKL
Sbjct: 481 ---GGSALPKDE-IDRMIKEAEAHAAEDHKRREEAEVRNTAEQLVYSTEKL 527
>sp|A6NJU9|YP038_HUMAN Putative NPIP-like protein LOC613037 OS=Homo sapiens PE=5 SV=4
Length = 1138
Score = 33.1 bits (74), Expect = 2.7, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 80 PIKNSSKDATPAPEQIPLLTEEAEPKDSNNPKRGKDA--TPATEQIPLLIEEAEPKDSKN 137
P+ S+ D P PL T+EAE + PKR + A P E + + EP S+
Sbjct: 1004 PLPPSADDNLKTP---PLATQEAEAEKPRKPKRQRAAEMEPPPEPKRRRVGDVEP--SRK 1058
Query: 138 PKRGKIAEV 146
PKR + A+V
Sbjct: 1059 PKRRRAADV 1067
>sp|P57071|PRD15_HUMAN PR domain zinc finger protein 15 OS=Homo sapiens GN=PRDM15 PE=2
SV=4
Length = 1507
Score = 33.1 bits (74), Expect = 2.8, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 40/92 (43%), Gaps = 18/92 (19%)
Query: 77 ESLPIKNSSKDATPAPEQIPLLTEEAEPKDSNNPKRGKDATPATEQIPLLIEEAEPKDSK 136
+SLP + S+ A P EQ + P+ A P +E + ++ +P+ +
Sbjct: 590 KSLPPGSQSEAAAPEKEQ-------------DTPRGEPPAVPESENVATKEQKKKPRRGR 636
Query: 137 NPKRGKIAEVLIFIYEKLKLKQILQ-----PP 163
PK K + L+ + +K +Q+ + PP
Sbjct: 637 KPKVSKAEQPLVIVEDKEPTEQVAEIITEVPP 668
>sp|A8MRT5|K220L_HUMAN Putative NPIP-like protein LOC100132247 OS=Homo sapiens PE=5 SV=3
Length = 1133
Score = 33.1 bits (74), Expect = 3.0, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 80 PIKNSSKDATPAPEQIPLLTEEAEPKDSNNPKRGKDA--TPATEQIPLLIEEAEPKDSKN 137
P+ S+ D P PL T+EAE + PKR + A P E + + EP S+
Sbjct: 999 PLPPSADDNLKTP---PLATQEAEAEKPRKPKRQRAAEMEPPPEPKRRRVGDVEP--SRK 1053
Query: 138 PKRGKIAEV 146
PKR + A+V
Sbjct: 1054 PKRRRAADV 1062
>sp|Q92617|NPPL3_HUMAN Nuclear pore complex-interacting protein-like 3 OS=Homo sapiens
GN=NPIPL3 PE=2 SV=5
Length = 1050
Score = 33.1 bits (74), Expect = 3.1, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 80 PIKNSSKDATPAPEQIPLLTEEAEPKDSNNPKRGKDA--TPATEQIPLLIEEAEPKDSKN 137
P+ S+ D P PL T+EAE + PKR + A P E + + EP S+
Sbjct: 916 PLPPSADDNLKTP---PLATQEAEAEKPRKPKRQRAAEMEPPPEPKRRRVGDVEP--SRK 970
Query: 138 PKRGKIAEV 146
PKR + A+V
Sbjct: 971 PKRRRAADV 979
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.141 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 127,433,091
Number of Sequences: 539616
Number of extensions: 5614653
Number of successful extensions: 13882
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 13647
Number of HSP's gapped (non-prelim): 239
length of query: 321
length of database: 191,569,459
effective HSP length: 117
effective length of query: 204
effective length of database: 128,434,387
effective search space: 26200614948
effective search space used: 26200614948
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)