BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020837
(320 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 145/301 (48%), Gaps = 35/301 (11%)
Query: 4 ITSRAAFG----NRSRDQETFVSVIEETTKVISGFNIADMF-----------PSIGLLQR 48
+ + +FG + + Q+ FV E TK + F+ D F P + +L
Sbjct: 161 VITSTSFGVNIDSLNNPQDPFV----ENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNI 216
Query: 49 LTGNKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS 108
+ L + R+ E+ + D +K + D + +++ Q + +S
Sbjct: 217 CVFPREVTNFLRKSVKRMKESRLEDTQKHRV-----------DFLQLMIDSQNSKETESH 265
Query: 109 LTTDSIKAV---IFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVD 165
++ V I IF AG ET+++ + + MYE+ +P V +K Q E+ V K
Sbjct: 266 KALSDLELVAQSIIFIF-AGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPT 324
Query: 166 ETGINEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPM 225
+ +M+YL +VV ETLRL P A + R C EING IP V++ S+A RDP
Sbjct: 325 YDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPK 384
Query: 226 YWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEW 285
YWTEPE F+PERF + D + Y PFG+G R C GM F L +++L L +L +F +
Sbjct: 385 YWTEPEKFLPERFSKKNKD-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSF 443
Query: 286 K 286
K
Sbjct: 444 K 444
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 145/301 (48%), Gaps = 35/301 (11%)
Query: 4 ITSRAAFG----NRSRDQETFVSVIEETTKVISGFNIADMF-----------PSIGLLQR 48
+ + +FG + + Q+ FV E TK + F+ D F P + +L
Sbjct: 162 VITSTSFGVNIDSLNNPQDPFV----ENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNI 217
Query: 49 LTGNKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS 108
+ L + R+ E+ + D +K + D + +++ Q + +S
Sbjct: 218 CVFPREVTNFLRKSVKRMKESRLEDTQKHRV-----------DFLQLMIDSQNSKETESH 266
Query: 109 LTTDSIKAV---IFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVD 165
++ V I IF AG ET+++ + + MYE+ +P V +K Q E+ V K
Sbjct: 267 KALSDLELVAQSIIFIF-AGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPT 325
Query: 166 ETGINEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPM 225
+ +M+YL +VV ETLRL P A + R C EING IP V++ S+A RDP
Sbjct: 326 YDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPK 385
Query: 226 YWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEW 285
YWTEPE F+PERF + D + Y PFG+G R C GM F L +++L L +L +F +
Sbjct: 386 YWTEPEKFLPERFSKKNKD-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSF 444
Query: 286 K 286
K
Sbjct: 445 K 445
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 145/301 (48%), Gaps = 35/301 (11%)
Query: 4 ITSRAAFG----NRSRDQETFVSVIEETTKVISGFNIADMF-----------PSIGLLQR 48
+ + +FG + + Q+ FV E TK + F+ D F P + +L
Sbjct: 163 VITSTSFGVNIDSLNNPQDPFV----ENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNI 218
Query: 49 LTGNKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS 108
+ L + R+ E+ + D +K + D + +++ Q + +S
Sbjct: 219 CVFPREVTNFLRKSVKRMKESRLEDTQKHRV-----------DFLQLMIDSQNSKETESH 267
Query: 109 LTTDSIKAV---IFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVD 165
++ V I IF AG ET+++ + + MYE+ +P V +K Q E+ V K
Sbjct: 268 KALSDLELVAQSIIFIF-AGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPT 326
Query: 166 ETGINEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPM 225
+ +M+YL +VV ETLRL P A + R C EING IP V++ S+A RDP
Sbjct: 327 YDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPK 386
Query: 226 YWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEW 285
YWTEPE F+PERF + D + Y PFG+G R C GM F L +++L L +L +F +
Sbjct: 387 YWTEPEKFLPERFSKKNKD-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSF 445
Query: 286 K 286
K
Sbjct: 446 K 446
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 136/286 (47%), Gaps = 19/286 (6%)
Query: 29 KVISGFNIADMFPSIGLLQRLTGNKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGD 88
+V+ N AD P + L + N + L ++ ++ ++ +H K + G
Sbjct: 199 EVVGSGNPADFIPILRYLPNPSLNA--FKDLNEKFYSFMQKMVKEH------YKTFEKGH 250
Query: 89 DEDLVDVLLKIQGHGDLDSS----LTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNP 144
D+ D L++ LD + L+ + I ++ D+FGAG +T T + W++ ++ NP
Sbjct: 251 IRDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNP 310
Query: 145 RVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPL-ILRECGDSCEIN 203
RV +K Q E+ V R + + + + Y++ + ET R P I +
Sbjct: 311 RVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLK 370
Query: 204 GFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFI--DHSVDYKGTNFEYIPFGAGRRI 261
GF IP V VN W D W P F+PERF+ D ++D K + + I FG G+R
Sbjct: 371 GFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAID-KVLSEKVIIFGMGKRK 429
Query: 262 CPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVR 307
C G + V L LA+LL E+ +P G+K +DMT +G T++
Sbjct: 430 CIGETIARWEVFLFLAILLQRVEFSVPLGVK---VDMTPIYGLTMK 472
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 132/305 (43%), Gaps = 20/305 (6%)
Query: 10 FGNRSRDQETFVSVIEETTKVISGFNIADMFPSIGLLQR--LTGNKSQVEKLLQEADRIV 67
F S + + V E + S N D FP + L L K+ ++ L + V
Sbjct: 185 FPESSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFNQRFLWFLQKTV 244
Query: 68 ENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--LTTDSIKAVIFDIFGAG 125
+ D K D+ L K G S + + I ++ DIFGAG
Sbjct: 245 QEHYQDFDKNSV----------RDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAG 294
Query: 126 SETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRL 185
+T T + W++ ++ P + +K Q E+ V R+ + + ++ YL+ + ET R
Sbjct: 295 FDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRH 354
Query: 186 HPSAPL-ILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFI--DHS 242
P I +NGF IP K V VN W DP W +P F PERF+ D +
Sbjct: 355 SSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGT 414
Query: 243 VDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAF 302
K + + + FG G+R C G + L LA+LL E+ +P G+K +D+T +
Sbjct: 415 AINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVK---VDLTPIY 471
Query: 303 GATVR 307
G T++
Sbjct: 472 GLTMK 476
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 100/191 (52%), Gaps = 7/191 (3%)
Query: 104 DLDSSLTTDS-IKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREV--FNR 160
D DS L +D+ I I DIFGAG ET+ + V W + ++ NP+V KK E+ + F+R
Sbjct: 263 DQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSR 322
Query: 161 KGKVDETGINEMKYLKLVVKETLRLHPSAP-LILRECGDSCEINGFNIPAKARVIVNSWA 219
+ + N + L+ ++E LRL P AP LI + I F + VI+N WA
Sbjct: 323 TPTISDR--NRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWA 380
Query: 220 TGRDPMYWTEPESFIPERFIDHS-VDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAM 278
+ W +P+ F+PERF++ + + Y+PFGAG R C G + L +A
Sbjct: 381 LHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAW 440
Query: 279 LLYHFEWKLPN 289
LL F+ ++P+
Sbjct: 441 LLQRFDLEVPD 451
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 121/245 (49%), Gaps = 11/245 (4%)
Query: 49 LTGNKSQVEKLLQEADRIVENIINDH-KKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDS 107
L G + Q+ ++ +E+ R + + D ++R+ LK + + L +L +G D D
Sbjct: 185 LPGKRKQLREV-RESIRFLRQVGRDWVQRRREALKRGEEVPADILTQILKAEEGAQD-DE 242
Query: 108 SLTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET 167
L + + F AG ETSA + + + E+ + P ++ + QAEV EV K +D
Sbjct: 243 GLLDNFV-----TFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFE 297
Query: 168 GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYW 227
+ ++YL V+KE+LRL+P A R + I+G +P ++ +++ GR Y+
Sbjct: 298 DLGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYF 357
Query: 228 TEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKL 287
+P +F P+RF + F Y PF G R C G F V++ +A LL E++L
Sbjct: 358 EDPLTFNPDRFGPGA---PKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRL 414
Query: 288 PNGMK 292
G +
Sbjct: 415 VPGQR 419
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 3/218 (1%)
Query: 103 GDLDSSLTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKG 162
G+ +SS ++++ V+ D+F AG T++TT+ W + M+ +P V ++ Q E+ +V +
Sbjct: 262 GNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVR 321
Query: 163 KVDETGINEMKYLKLVVKETLRLHPSAPL-ILRECGDSCEINGFNIPAKARVIVNSWATG 221
+ + M Y V+ E R PL + E+ GF IP +I N +
Sbjct: 322 RPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVL 381
Query: 222 RDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLY 281
+D W +P F PE F+D + ++PF AGRR C G + L LL
Sbjct: 382 KDEAVWEKPFRFHPEHFLDAQGHFVKPE-AFLPFSAGRRACLGEPLARMELFLFFTSLLQ 440
Query: 282 HFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPIPH 319
HF + +P G AF + +LC +P H
Sbjct: 441 HFSFSVPTGQPRPSHHGVFAFLVSP-SPYELCAVPRHH 477
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 3/218 (1%)
Query: 103 GDLDSSLTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKG 162
G+ +SS ++++ V+ D+F AG T++TT+ W + M+ +P V ++ Q E+ +V +
Sbjct: 262 GNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVR 321
Query: 163 KVDETGINEMKYLKLVVKETLRLHPSAPL-ILRECGDSCEINGFNIPAKARVIVNSWATG 221
+ + M Y V+ E R PL + E+ GF IP +I N +
Sbjct: 322 RPEMGDQAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVL 381
Query: 222 RDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLY 281
+D W +P F PE F+D + ++PF AGRR C G + L LL
Sbjct: 382 KDEAVWEKPFRFHPEHFLDAQGHFVKPE-AFLPFSAGRRACLGEPLARMELFLFFTSLLQ 440
Query: 282 HFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPIPH 319
HF + +P G AF + +LC +P H
Sbjct: 441 HFSFSVPTGQPRPSHHGVFAFLVSP-SPYELCAVPRHH 477
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 132/302 (43%), Gaps = 28/302 (9%)
Query: 4 ITSRAAFGNRSRDQET----FVSVIEETTKVISGFNI--ADMFPSIGLL-----QRLTGN 52
IT+ FG R ++T + + E ++ + ++ + FP IG+L Q+L N
Sbjct: 164 ITNLIIFGERFTYEDTDFQHMIELFSENVELAASASVFLYNAFPWIGILPFGKHQQLFRN 223
Query: 53 KSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKI--QGHGDLDSSLT 110
+ V L R++E KA++ N K + VD L QG D S+ +
Sbjct: 224 AAVVYDFL---SRLIE---------KASV-NRKPQLPQHFVDAYLDEMDQGKNDPSSTFS 270
Query: 111 TDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDETGIN 170
+++ + ++ AG+ET+ + WA+ M P + + Q E+ + GK
Sbjct: 271 KENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKC 330
Query: 171 EMKYLKLVVKETLRLHPSAPL-ILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTE 229
+M Y + V+ E LR PL I + + G++IP VI N ++ D YW +
Sbjct: 331 KMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRD 390
Query: 230 PESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPN 289
PE F PERF+D S Y +PF GRR C G + L LL F P+
Sbjct: 391 PEVFHPERFLD-SSGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPH 449
Query: 290 GM 291
+
Sbjct: 450 EL 451
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 132/302 (43%), Gaps = 28/302 (9%)
Query: 4 ITSRAAFGNRSRDQET----FVSVIEETTKVISGFNI--ADMFPSIGLL-----QRLTGN 52
IT+ FG R ++T + + E ++ + ++ + FP IG+L Q+L N
Sbjct: 164 ITNLIIFGERFTYEDTDFQHMIELFSENVELAASASVFLYNAFPWIGILPFGKHQQLFRN 223
Query: 53 KSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKI--QGHGDLDSSLT 110
+ V L R++E KA++ N K + VD L QG D S+ +
Sbjct: 224 AAVVYDFL---SRLIE---------KASV-NRKPQLPQHFVDAYLDEMDQGKNDPSSTFS 270
Query: 111 TDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDETGIN 170
+++ + ++ AG+ET+ + WA+ M P + + Q E+ + GK
Sbjct: 271 KENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKC 330
Query: 171 EMKYLKLVVKETLRLHPSAPL-ILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTE 229
+M Y + V+ E LR PL I + + G++IP VI N ++ D YW +
Sbjct: 331 KMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRD 390
Query: 230 PESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPN 289
PE F PERF+D S Y +PF GRR C G + L LL F P+
Sbjct: 391 PEVFHPERFLDSS-GYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPH 449
Query: 290 GM 291
+
Sbjct: 450 EL 451
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 129/265 (48%), Gaps = 12/265 (4%)
Query: 59 LLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDV-LLKIQGHGDLDSSLTTDSIKAV 117
LL+ AD I I+ K+ + L + D +D L+K++ +L+ T +S+
Sbjct: 215 LLKNADYIKNFIMEKVKEHQKLLD---VNNPRDFIDCFLIKMEQENNLE--FTLESLVIA 269
Query: 118 IFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKL 177
+ D+FGAG+ET++TT+ +++ ++K+P V + Q E+ V R + M Y
Sbjct: 270 VSDLFGAGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQDRSRMPYTDA 329
Query: 178 VVKETLRLHPSAPLIL-RECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPE 236
V+ E R P L + IP +I + + D + P+ F P
Sbjct: 330 VIHEIQRFIDLLPTNLPHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPG 389
Query: 237 RFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDL 296
F+D S ++K +++ ++PF AG+R+C G GLA +EL L + +KL + ++ +DL
Sbjct: 390 HFLDESGNFKKSDY-FMPFSAGKRMCVGE--GLARMELFLFLTSILQNFKLQSLVEPKDL 446
Query: 297 DMTEAFGA--TVRRKQDLCMIPIPH 319
D+T +V LC IPI H
Sbjct: 447 DITAVVNGFVSVPPSYQLCFIPIHH 471
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 151/316 (47%), Gaps = 24/316 (7%)
Query: 15 RDQETFVSVIE---ETTKVISG--FNIADMFPSIGLLQRLTGNKSQVEKLLQEADRIVEN 69
+DQ+ F++++E E +++S I + FP+I + G + KLL+ + +
Sbjct: 173 KDQQ-FLNLMEKLNENIRIVSTPWIQICNNFPTI--IDYFPGTHN---KLLKNLAFMESD 226
Query: 70 IINDHKKRKATLKNCKTGDDEDLVDV-LLKIQGHG-DLDSSLTTDSIKAVIFDIFGAGSE 127
I+ K+ + ++ + D +D L+K++ + S T +++ D+ GAG+E
Sbjct: 227 ILEKVKEHQESMD---INNPRDFIDCFLIKMEKEKQNQQSEFTIENLVITAADLLGAGTE 283
Query: 128 TSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHP 187
T++TT+ +A+ ++K+P V K Q E+ V R M Y VV E R
Sbjct: 284 TTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQDRGHMPYTDAVVHEVQRYID 343
Query: 188 SAPLILRECGDSCEINGFN--IPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDY 245
P L +C++ N IP ++ + + D + PE F P F+D ++
Sbjct: 344 LIPTSLPH-AVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLDEGGNF 402
Query: 246 KGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFG-- 303
K +N+ ++PF AG+RIC G GLA +EL L + + L + + +DLD T
Sbjct: 403 KKSNY-FMPFSAGKRICVGE--GLARMELFLFLTFILQNFNLKSLIDPKDLDTTPVVNGF 459
Query: 304 ATVRRKQDLCMIPIPH 319
A+V LC IPI H
Sbjct: 460 ASVPPFYQLCFIPIHH 475
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 153/316 (48%), Gaps = 24/316 (7%)
Query: 15 RDQETFVSVIE---ETTKVISG--FNIADMFPSIGLLQRLTGNKSQVEKLLQEADRIVEN 69
+DQ+ F++++E E +++S + + FP+ LL G + KLL+ +
Sbjct: 171 KDQQ-FLNLMEKLNENIEILSSPWIQVYNNFPA--LLDYFPGTHN---KLLKNVAFMKSY 224
Query: 70 IINDHKKRKATLKNCKTGDDEDLVDV-LLKIQGHG-DLDSSLTTDSIKAVIFDIFGAGSE 127
I+ K+ + ++ + +D +D L+K++ + S T +S++ D+FGAG+E
Sbjct: 225 ILEKVKEHQESMD---MNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTE 281
Query: 128 TSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHP 187
T++TT+ +A+ ++K+P V K Q E+ V R + M Y VV E R
Sbjct: 282 TTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYID 341
Query: 188 SAPLILRECGDSCEINGFN--IPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDY 245
P L +C+I N IP ++++ + D + PE F P F+D ++
Sbjct: 342 LLPTSLPH-AVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNF 400
Query: 246 KGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFG-- 303
K + + ++PF AG+RIC G + + L L +L +F K + + ++LD T
Sbjct: 401 KKSKY-FMPFSAGKRICVGEALAGMELFLFLTSILQNFNLK--SLVDPKNLDTTPVVNGF 457
Query: 304 ATVRRKQDLCMIPIPH 319
A+V LC IP+ H
Sbjct: 458 ASVPPFYQLCFIPVHH 473
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 102/190 (53%), Gaps = 8/190 (4%)
Query: 90 EDLVDVLLKIQGHGDLDSSLTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKK 149
D +L ++ G DS ++ + IKA + ++ G +T++ T+ W +YEM +N +V
Sbjct: 256 HDYRGILYRLLG----DSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDM 311
Query: 150 AQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPA 209
+AEV ++ T + + LK +KETLRLHP + + R + + + IPA
Sbjct: 312 LRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPA 371
Query: 210 KARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGL 269
K V V +A GR+P ++ +PE+F P R++ S D T F + FG G R C G +
Sbjct: 372 KTLVQVAIYALGREPTFFFDPENFDPTRWL--SKDKNITYFRNLGFGWGVRQCLGRR--I 427
Query: 270 ASVELTLAML 279
A +E+T+ ++
Sbjct: 428 AELEMTIFLI 437
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 102/190 (53%), Gaps = 8/190 (4%)
Query: 90 EDLVDVLLKIQGHGDLDSSLTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKK 149
D +L ++ G DS ++ + IKA + ++ G +T++ T+ W +YEM +N +V
Sbjct: 253 HDYRGILYRLLG----DSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDM 308
Query: 150 AQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPA 209
+AEV ++ T + + LK +KETLRLHP + + R + + + IPA
Sbjct: 309 LRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPA 368
Query: 210 KARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGL 269
K V V +A GR+P ++ +PE+F P R++ S D T F + FG G R C G +
Sbjct: 369 KTLVQVAIYALGREPTFFFDPENFDPTRWL--SKDKNITYFRNLGFGWGVRQCLGRR--I 424
Query: 270 ASVELTLAML 279
A +E+T+ ++
Sbjct: 425 AELEMTIFLI 434
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 105/222 (47%), Gaps = 6/222 (2%)
Query: 66 IVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSSLTTDSIKAVIFDIFGAG 125
+V +I+N T K+ D D++DVL+ ++ + D I + + AG
Sbjct: 204 LVADIMNGRIANPPTDKS-----DRDMLDVLIAVKAETGT-PRFSADEITGMFISMMFAG 257
Query: 126 SETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRL 185
TS+ T W + E+M++ E+ E++ V + ++ L+ V+KETLRL
Sbjct: 258 HHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRL 317
Query: 186 HPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDY 245
HP +++R E+ G I V + + R P + +P F+P R+ +
Sbjct: 318 HPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQED 377
Query: 246 KGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKL 287
+ +IPFGAGR C G +F + ++ ++LL +E+++
Sbjct: 378 LLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEM 419
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 105/222 (47%), Gaps = 6/222 (2%)
Query: 66 IVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSSLTTDSIKAVIFDIFGAG 125
+V +I+N T K+ D D++DVL+ ++ + D I + + AG
Sbjct: 204 LVADIMNGRIANPPTDKS-----DRDMLDVLIAVKAETGT-PRFSADEITGMFISMMFAG 257
Query: 126 SETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRL 185
TS+ T W + E+M++ E+ E++ V + ++ L+ V+KETLRL
Sbjct: 258 HHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRL 317
Query: 186 HPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDY 245
HP +++R E+ G I V + + R P + +P F+P R+ +
Sbjct: 318 HPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQED 377
Query: 246 KGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKL 287
+ +IPFGAGR C G +F + ++ ++LL +E+++
Sbjct: 378 LLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEM 419
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 105/222 (47%), Gaps = 6/222 (2%)
Query: 66 IVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSSLTTDSIKAVIFDIFGAG 125
+V +I+N T K+ D D++DVL+ ++ + D I + + AG
Sbjct: 204 LVADIMNGRIANPPTDKS-----DRDMLDVLIAVKAETGT-PRFSADEITGMFISMMFAG 257
Query: 126 SETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRL 185
TS+ T W + E+M++ E+ E++ V + ++ L+ V+KETLRL
Sbjct: 258 HHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRL 317
Query: 186 HPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDY 245
HP +++R E+ G I V + + R P + +P F+P R+ +
Sbjct: 318 HPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQED 377
Query: 246 KGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKL 287
+ +IPFGAGR C G +F + ++ ++LL +E+++
Sbjct: 378 LLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEM 419
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 105/222 (47%), Gaps = 6/222 (2%)
Query: 66 IVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSSLTTDSIKAVIFDIFGAG 125
+V +I+N T K+ D D++DVL+ ++ + D I + + AG
Sbjct: 204 LVADIMNGRIANPPTDKS-----DRDMLDVLIAVKAETGT-PRFSADEITGMFISMMFAG 257
Query: 126 SETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRL 185
TS+ T W + E+M++ E+ E++ V + ++ L+ V+KETLRL
Sbjct: 258 HHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRL 317
Query: 186 HPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDY 245
HP +++R E+ G I V + + R P + +P F+P R+ +
Sbjct: 318 HPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQED 377
Query: 246 KGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKL 287
+ +IPFGAGR C G +F + ++ ++LL +E+++
Sbjct: 378 LLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEM 419
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 129/268 (48%), Gaps = 13/268 (4%)
Query: 58 KLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDV-LLKIQGHG-DLDSSLTTDSIK 115
KLL+ + I+ K+ + ++ + +D +D L+K++ + S T +S++
Sbjct: 215 KLLKNVAFMKSYILEKVKEHQESMD---MNNPQDFIDCFLMKMEKEKHNQPSEFTIESLE 271
Query: 116 AVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYL 175
D+FGAG+ET++TT+ +A+ ++K+P V K Q E+ V R + M Y
Sbjct: 272 NTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYT 331
Query: 176 KLVVKETLRLHPSAPLILRECGDSCEINGFN--IPAKARVIVNSWATGRDPMYWTEPESF 233
VV E R P L +C+I N IP ++++ + D + PE F
Sbjct: 332 DAVVHEVQRYIDLLPTSLPH-AVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMF 390
Query: 234 IPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKH 293
P F+D ++K + + ++PF AG+RIC G + + L L +L +F K + +
Sbjct: 391 DPHHFLDEGGNFKKSKY-FMPFSAGKRICVGEALAGMELFLFLTSILQNFNLK--SLVDP 447
Query: 294 EDLDMTEAFG--ATVRRKQDLCMIPIPH 319
++LD T A+V LC IPI H
Sbjct: 448 KNLDTTPVVNGFASVPPFYQLCFIPIHH 475
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 120/261 (45%), Gaps = 16/261 (6%)
Query: 44 GLLQRLTGNKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDV-LLKIQ-G 101
G L+ G Q+ + LQE + + + H+ ATL + D +DV LL+++
Sbjct: 203 GFLKYFPGTHRQIYRNLQEINTFIGQSVEKHR---ATLD---PSNPRDFIDVYLLRMEKD 256
Query: 102 HGDLDSSLTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVF--N 159
D S ++ + +F AG+ET++TT+ + M+K P V ++ Q E+ +V +
Sbjct: 257 KSDPSSEFHHQNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSH 316
Query: 160 RKGKVDETGINEMKYLKLVVKETLRLHPSAPL-ILRECGDSCEINGFNIPAKARVIVNSW 218
R +D+ +M Y V+ E RL P + + G+ IP V
Sbjct: 317 RPPALDDRA--KMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLS 374
Query: 219 ATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAM 278
+ DP Y+ P +F P F+D + K N ++PF G+RIC G G+A EL L
Sbjct: 375 SALHDPRYFETPNTFNPGHFLDANGALK-RNEGFMPFSLGKRICLGE--GIARTELFLFF 431
Query: 279 LLYHFEWKLPNGMKHEDLDMT 299
+ + + + ED+D+T
Sbjct: 432 TTILQNFSIASPVPPEDIDLT 452
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 120/261 (45%), Gaps = 16/261 (6%)
Query: 44 GLLQRLTGNKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDV-LLKIQ-G 101
G L+ G Q+ + LQE + + + H+ ATL + D +DV LL+++
Sbjct: 203 GFLKYFPGTHRQIYRNLQEINTFIGQSVEKHR---ATLD---PSNPRDFIDVYLLRMEKD 256
Query: 102 HGDLDSSLTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVF--N 159
D S ++ + +F AG+ET++TT+ + M+K P V ++ Q E+ +V +
Sbjct: 257 KSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSH 316
Query: 160 RKGKVDETGINEMKYLKLVVKETLRLHPSAPL-ILRECGDSCEINGFNIPAKARVIVNSW 218
R +D+ +M Y V+ E RL P + + G+ IP V
Sbjct: 317 RPPALDDRA--KMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLS 374
Query: 219 ATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAM 278
+ DP Y+ P +F P F+D + K N ++PF G+RIC G G+A EL L
Sbjct: 375 SALHDPRYFETPNTFNPGHFLDANGALK-RNEGFMPFSLGKRICAGE--GIARTELFLFF 431
Query: 279 LLYHFEWKLPNGMKHEDLDMT 299
+ + + + ED+D+T
Sbjct: 432 TTILQNFSIASPVPPEDIDLT 452
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 120/261 (45%), Gaps = 16/261 (6%)
Query: 44 GLLQRLTGNKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDV-LLKIQ-G 101
G L+ G Q+ + LQE + + + H+ ATL + D +DV LL+++
Sbjct: 203 GFLKHFPGTHRQIYRNLQEINTFIGQSVEKHR---ATLD---PSNPRDFIDVYLLRMEKD 256
Query: 102 HGDLDSSLTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVF--N 159
D S ++ + +F AG+ET++TT+ + M+K P V ++ Q E+ +V +
Sbjct: 257 KSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSH 316
Query: 160 RKGKVDETGINEMKYLKLVVKETLRLHPSAPL-ILRECGDSCEINGFNIPAKARVIVNSW 218
R +D+ +M Y V+ E RL P + + G+ IP V
Sbjct: 317 RPPALDDRA--KMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLS 374
Query: 219 ATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAM 278
+ DP Y+ P +F P F+D + K N ++PF G+RIC G G+A EL L
Sbjct: 375 SALHDPRYFETPNTFNPGHFLDANGALK-RNEGFMPFSLGKRICLGE--GIARTELFLFF 431
Query: 279 LLYHFEWKLPNGMKHEDLDMT 299
+ + + + ED+D+T
Sbjct: 432 TTILQNFSIASPVPPEDIDLT 452
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 134/305 (43%), Gaps = 20/305 (6%)
Query: 4 ITSRAAFGNR--SRDQE--TFVSVIEETTKVISGF--NIADMFPSIGLLQRLTGNKSQVE 57
I FG R +DQE +++ +T +IS + ++F G L+ G QV
Sbjct: 159 IICSIVFGKRFHYQDQEFLKMLNLFYQTFSLISSVFGQLFELFS--GFLKHFPGAHRQVY 216
Query: 58 KLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDV-LLKIQGH-GDLDSSLTTDSIK 115
K LQE + + + + H++ DL+D LL ++ + S + ++
Sbjct: 217 KNLQEINAYIGHSVEKHRE------TLDPSAPRDLIDTYLLHMEKEKSNAHSEFSHQNLN 270
Query: 116 AVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYL 175
+F AG+ET++TT+ + M+K P V ++ E+ +V + +M Y
Sbjct: 271 LNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRAKMPYT 330
Query: 176 KLVVKETLRLHPSAPL-ILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFI 234
+ V+ E R P+ + G+ IP V + DP Y+ +P++F
Sbjct: 331 EAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFN 390
Query: 235 PERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHE 294
P+ F+D + K T +IPF G+RIC G A + L +L +F P + E
Sbjct: 391 PDHFLDANGALKKTE-AFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASP--VAPE 447
Query: 295 DLDMT 299
D+D+T
Sbjct: 448 DIDLT 452
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 129/292 (44%), Gaps = 18/292 (6%)
Query: 34 FNIADMFPSIGLLQRLTGNKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLV 93
+ + FPS L L G+ +V K + E V + +H ++ NC DL
Sbjct: 194 LQLYNNFPS--FLHYLPGSHRKVIKNVAEVKEYVSERVKEH--HQSLDPNCP----RDLT 245
Query: 94 DVLLKIQGHGDLDSS---LTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKA 150
D LL ++ + S+ T D I + D+F AG+ET++TT+ + + +MK P + +K
Sbjct: 246 DCLL-VEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKL 304
Query: 151 QAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPLIL-RECGDSCEINGFNIPA 209
E+ V EM Y+ VV E R P L E G+ IP
Sbjct: 305 HEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPK 364
Query: 210 KARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGL 269
V+ + D + +PE F PE F++ + +K +++ + PF G+R+C G GL
Sbjct: 365 GTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSDY-FKPFSTGKRVCAGE--GL 421
Query: 270 ASVELTLAM--LLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPIPH 319
A +EL L + +L HF K K DL + + LC+IP H
Sbjct: 422 ARMELFLLLCAILQHFNLKPLVDPKDIDLSPIHIGFGCIPPRYKLCVIPRSH 473
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 140/324 (43%), Gaps = 31/324 (9%)
Query: 4 ITSRAAFGNR-SRDQETFVSVI---EETTKVISGFNIADMFPSIGLLQRLTGNKSQVEKL 59
+ S FG R S D F ++ EE + + ++ D+ P LQ V +
Sbjct: 164 VMSAVCFGCRYSHDDPEFRELLSHNEEFGRTVGAGSLVDVMP---WLQYFPNPVRTVFRE 220
Query: 60 LQEADRIVENIINDHKKRKATLKNCKT----GDDEDLVDVLL-----KIQG--HGDLDSS 108
++ +R N I D L++C++ D++D + K G HG +
Sbjct: 221 FEQLNRNFSNFILD-----KFLRHCESLRPGAAPRDMMDAFILSAEKKAAGDSHGG-GAR 274
Query: 109 LTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDETG 168
L +++ A I DIFGA +T +T + W + + P V + QAE+ +V R
Sbjct: 275 LDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGD 334
Query: 169 INEMKYLKLVVKETLRLHPSAPLILRECGDS-CEINGFNIPAKARVIVNSWATGRDPMYW 227
+ Y+ + E +R P+ + + + G++IP V VN W+ DP+ W
Sbjct: 335 QPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKW 394
Query: 228 TEPESFIPERFIDH-SVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWK 286
PE+F P RF+D + K + F G+R C G + L +++L + +++
Sbjct: 395 PNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFR 454
Query: 287 L-PNGMKHEDLDMTEAFGATVRRK 309
PN E M ++G T++ K
Sbjct: 455 ANPN----EPAKMNFSYGLTIKPK 474
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 120/261 (45%), Gaps = 16/261 (6%)
Query: 44 GLLQRLTGNKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDV-LLKIQ-G 101
G L+ G Q+ + LQE + + + H+ ATL + D +DV LL+++
Sbjct: 203 GFLKYFPGTHRQIYRNLQEINTFIGQSVEKHR---ATLD---PSNPRDFIDVYLLRMEKD 256
Query: 102 HGDLDSSLTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVF--N 159
D S ++ + +F AG+ET++TT+ + M+K P V ++ Q E+ +V +
Sbjct: 257 KSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSH 316
Query: 160 RKGKVDETGINEMKYLKLVVKETLRLHPSAPL-ILRECGDSCEINGFNIPAKARVIVNSW 218
R +D+ +M Y V+ E RL P + + G+ IP V
Sbjct: 317 RPPALDDRA--KMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLS 374
Query: 219 ATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAM 278
+ DP Y+ P +F P F+D + K N ++PF G+RIC G G+A EL L
Sbjct: 375 SALHDPRYFETPNTFNPGHFLDANGALK-RNEGFMPFSLGKRICLGE--GIARTELFLFF 431
Query: 279 LLYHFEWKLPNGMKHEDLDMT 299
+ + + + ED+D+T
Sbjct: 432 TTILQNFSIASPVPPEDIDLT 452
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 149/330 (45%), Gaps = 28/330 (8%)
Query: 4 ITSRAAFGNR-SRDQETFVSVIE------ETTKVISGFNIADMFPSIGLLQRLTGNKSQV 56
+ S FG+R + + F+S++ + T +G + +MF S+ ++ L G + Q
Sbjct: 159 VISSIVFGDRFDYEDKEFLSLLRMMLGSFQFTATSTG-QLYEMFSSV--MKHLPGPQQQA 215
Query: 57 EKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVD-VLLKIQGH-GDLDSSLTTDSI 114
K LQ + + + +H +R D +D L+++Q + ++ ++
Sbjct: 216 FKELQGLEDFIAKKV-EHNQR-----TLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNL 269
Query: 115 KAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVF--NRKGKVDETGINEM 172
++F AG+ET +TT+ + +MK+P V K E+ V NR+ K ++ +M
Sbjct: 270 VMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRA--KM 327
Query: 173 KYLKLVVKETLRLHPSAPLIL-RECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPE 231
Y + V+ E R P+ L + F +P V + RDP +++ P
Sbjct: 328 PYTEAVIHEIQRFGDMLPMGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPR 387
Query: 232 SFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTL--AMLLYHFEWKLPN 289
F P+ F+D +K ++ ++PF G+R C G GLA +EL L ++ +F +K P
Sbjct: 388 DFNPQHFLDKKGQFKKSD-AFVPFSIGKRYCFGE--GLARMELFLFFTTIMQNFRFKSPQ 444
Query: 290 GMKHEDLDMTEAFGATVRRKQDLCMIPIPH 319
K D+ AT+ R + +P H
Sbjct: 445 SPKDIDVSPKHVGFATIPRNYTMSFLPRHH 474
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 120/261 (45%), Gaps = 16/261 (6%)
Query: 44 GLLQRLTGNKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDV-LLKIQ-G 101
G L+ G Q+ + LQE + + + H+ ATL + D +DV LL+++
Sbjct: 203 GFLKYFPGTHRQIYRNLQEINTFIGQSVEKHR---ATLD---PSNPRDFIDVYLLRMEKD 256
Query: 102 HGDLDSSLTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVF--N 159
D S ++ + +F AG+ET++TT+ + M+K P V ++ Q E+ +V +
Sbjct: 257 KSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSH 316
Query: 160 RKGKVDETGINEMKYLKLVVKETLRLHPSAPL-ILRECGDSCEINGFNIPAKARVIVNSW 218
R +D+ +M Y V+ E RL P + + G+ IP V
Sbjct: 317 RPPALDDRA--KMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLS 374
Query: 219 ATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAM 278
+ DP Y+ P +F P F+D + K N ++PF G+RIC G G+A EL L
Sbjct: 375 SALHDPRYFETPNTFNPGHFLDANGALK-RNEGFMPFSLGKRICLGE--GIARTELFLFF 431
Query: 279 LLYHFEWKLPNGMKHEDLDMT 299
+ + + + ED+D+T
Sbjct: 432 TTILQNFSIASPVPPEDIDLT 452
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 155/331 (46%), Gaps = 30/331 (9%)
Query: 4 ITSRAAFGNR--SRDQETFVSVIE------ETTKVISGFNIADMFPSIGLLQRLTGNKSQ 55
+ S FG+R +D+E F+S++ + T +G + +MF S+ ++ L G + Q
Sbjct: 159 VISSIVFGDRFDYKDKE-FLSLLRMMLGSFQFTSTSTG-QLYEMFSSV--MKHLPGPQQQ 214
Query: 56 VEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVD-VLLKIQGH-GDLDSSLTTDS 113
+LLQ + + + +H +R D +D L+++Q + ++ +
Sbjct: 215 AFQLLQGLEDFIAKKV-EHNQR-----TLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKN 268
Query: 114 IKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVF--NRKGKVDETGINE 171
+ ++F AG+ET +TT+ + +MK+P V K E+ V NR+ K ++ +
Sbjct: 269 LVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRA--K 326
Query: 172 MKYLKLVVKETLRLHPSAPLIL-RECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEP 230
M Y++ V+ E R P+ L R + F +P V + RDP +++ P
Sbjct: 327 MPYMEAVIHEIQRFGDVIPMGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNP 386
Query: 231 ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNG 290
+ F P+ F++ +K ++ ++PF G+R C G GLA +EL L ++L +
Sbjct: 387 QDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFGE--GLARMELFLFFTTVMQNFRLKSS 443
Query: 291 MKHEDLDMTEAF--GATVRRKQDLCMIPIPH 319
+D+D++ AT+ R + +P H
Sbjct: 444 QSPKDIDVSPKHVGFATIPRNYTMSFLPRHH 474
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 119/243 (48%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 202 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 250
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I AG ET++ + +A+Y ++KNP V++KA E V VD
Sbjct: 251 DDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 305
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+AP + + G + + ++V RD
Sbjct: 306 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 365
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + + PFG G+R CPG F L L L M+L HF
Sbjct: 366 TIWGDDVEEFRPERFENPSAIPQHA---FKPFGNGQRACPGQQFALHEATLVLGMMLKHF 422
Query: 284 EWK 286
+++
Sbjct: 423 DFE 425
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 153/331 (46%), Gaps = 30/331 (9%)
Query: 4 ITSRAAFGNR--SRDQETFVSVIE------ETTKVISGFNIADMFPSIGLLQRLTGNKSQ 55
+ S FG+R +D+E F+S++ + T +G + +MF S+ ++ L G + Q
Sbjct: 159 VISSIVFGDRFDYKDKE-FLSLLRMMLGIFQFTSTSTG-QLYEMFSSV--MKHLPGPQQQ 214
Query: 56 VEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVD-VLLKIQGH-GDLDSSLTTDS 113
+LLQ + + KK + + D +D L+++Q + ++ +
Sbjct: 215 AFQLLQGLEDFIA------KKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKN 268
Query: 114 IKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVF--NRKGKVDETGINE 171
+ ++F G+ET +TT+ + +MK+P V K E+ V NR+ K ++ +
Sbjct: 269 LVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRA--K 326
Query: 172 MKYLKLVVKETLRLHPSAPLIL-RECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEP 230
M Y++ V+ E R P+ L R + F +P V + RDP +++ P
Sbjct: 327 MPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNP 386
Query: 231 ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNG 290
+ F P+ F++ +K ++ ++PF G+R C G GLA +EL L ++L +
Sbjct: 387 QDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFGE--GLARMELFLFFTTVMQNFRLKSS 443
Query: 291 MKHEDLDMTEAF--GATVRRKQDLCMIPIPH 319
+D+D++ AT+ R + +P H
Sbjct: 444 QSPKDIDVSPKHVGFATIPRNYTMSFLPRHH 474
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 123/292 (42%), Gaps = 27/292 (9%)
Query: 4 ITSRAAFGNRSRDQ-ETFVSVIEETTKVISGFNIA--DMFPSIGLLQRLTGNKS--QVEK 58
I FGN+ F +++ K ++I DM P + R N ++++
Sbjct: 172 IICYLTFGNKEDTLVHAFHDCVQDLMKTWDHWSIQILDMVPFL----RFFPNPGLWRLKQ 227
Query: 59 LLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLD---SSLTTDSIK 115
++ D +VE + HK+ + G D+ D +L+ G ++ L +
Sbjct: 228 AIENRDHMVEKQLRRHKE------SMVAGQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVH 281
Query: 116 AVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYL 175
+ D+F G+ET+A+T+ WA+ ++ +P + ++ Q E+ + L
Sbjct: 282 MSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDRARL 341
Query: 176 KLV---VKETLRLHPSAPLIL-RECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPE 231
L+ + E LRL P PL L I G++IP VI N D W +P
Sbjct: 342 PLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPH 401
Query: 232 SFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
F P+RF++ G N + FG G R+C G S + + LA LL F
Sbjct: 402 EFRPDRFLE-----PGANPSALAFGCGARVCLGESLARLELFVVLARLLQAF 448
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 152/331 (45%), Gaps = 30/331 (9%)
Query: 4 ITSRAAFGNR--SRDQETFVSVIE------ETTKVISGFNIADMFPSIGLLQRLTGNKSQ 55
+ S FG+R +D+E F+S++ + T +G + +MF S+ ++ L G + Q
Sbjct: 159 VISSIVFGDRFDYKDKE-FLSLLRMMLGIFQFTSTSTG-QLYEMFSSV--MKHLPGPQQQ 214
Query: 56 VEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVD-VLLKIQGH-GDLDSSLTTDS 113
+LLQ + + KK + + D +D L+++Q + ++ +
Sbjct: 215 AFQLLQGLEDFIA------KKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKN 268
Query: 114 IKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVF--NRKGKVDETGINE 171
+ +F G+ET +TT+ + +MK+P V K E+ V NR+ K ++ +
Sbjct: 269 LVMTTLQLFVGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRA--K 326
Query: 172 MKYLKLVVKETLRLHPSAPLIL-RECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEP 230
M Y++ V+ E R P+ L R + F +P V + RDP +++ P
Sbjct: 327 MPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNP 386
Query: 231 ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNG 290
+ F P+ F++ +K ++ ++PF G+R C G GLA +EL L ++L +
Sbjct: 387 QDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFGE--GLARMELFLFFTTVMQNFRLKSS 443
Query: 291 MKHEDLDMTEAF--GATVRRKQDLCMIPIPH 319
+D+D++ AT+ R + +P H
Sbjct: 444 QSPKDIDVSPKHVGFATIPRNYTMSFLPRHH 474
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 152/331 (45%), Gaps = 30/331 (9%)
Query: 4 ITSRAAFGNR--SRDQETFVSVIE------ETTKVISGFNIADMFPSIGLLQRLTGNKSQ 55
+ S FG+R +D+E F+S++ + T +G + +MF S+ ++ L G + Q
Sbjct: 159 VISSIVFGDRFDYKDKE-FLSLLRMMLGIFQFTSTSTG-QLYEMFSSV--MKHLPGPQQQ 214
Query: 56 VEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVD-VLLKIQGH-GDLDSSLTTDS 113
+LLQ + + KK + + D +D L+++Q + ++ +
Sbjct: 215 AFQLLQGLEDFIA------KKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKN 268
Query: 114 IKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVF--NRKGKVDETGINE 171
+ +F G+ET +TT+ + +MK+P V K E+ V NR+ K ++ +
Sbjct: 269 LVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRA--K 326
Query: 172 MKYLKLVVKETLRLHPSAPLIL-RECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEP 230
M Y++ V+ E R P+ L R + F +P V + RDP +++ P
Sbjct: 327 MPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNP 386
Query: 231 ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNG 290
+ F P+ F++ +K ++ ++PF G+R C G GLA +EL L ++L +
Sbjct: 387 QDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFGE--GLARMELFLFFTTVMQNFRLKSS 443
Query: 291 MKHEDLDMTEAF--GATVRRKQDLCMIPIPH 319
+D+D++ AT+ R + +P H
Sbjct: 444 QSPKDIDVSPKHVGFATIPRNYTMSFLPRHH 474
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 152/331 (45%), Gaps = 30/331 (9%)
Query: 4 ITSRAAFGNR--SRDQETFVSVIE------ETTKVISGFNIADMFPSIGLLQRLTGNKSQ 55
+ S FG+R +D+E F+S++ + T +G + +MF S+ ++ L G + Q
Sbjct: 159 VISSIVFGDRFDYKDKE-FLSLLRMMLGIFQFTSTSTG-QLYEMFSSV--MKHLPGPQQQ 214
Query: 56 VEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVD-VLLKIQGH-GDLDSSLTTDS 113
+ LQ + + + +H +R D +D L+++Q + ++ +
Sbjct: 215 AFQCLQGLEDFIAKKV-EHNQR-----TLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKN 268
Query: 114 IKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVF--NRKGKVDETGINE 171
+ +F G+ET +TT+ + +MK+P V K E+ V NR+ K ++ +
Sbjct: 269 LVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRA--K 326
Query: 172 MKYLKLVVKETLRLHPSAPLIL-RECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEP 230
M Y++ V+ E R P+ L R + F +P V + RDP +++ P
Sbjct: 327 MPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNP 386
Query: 231 ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNG 290
+ F P+ F++ +K ++ ++PF G+R C G GLA +EL L ++L +
Sbjct: 387 QDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFGE--GLARMELFLFFTTVMQNFRLKSS 443
Query: 291 MKHEDLDMTEAF--GATVRRKQDLCMIPIPH 319
+D+D++ AT+ R + +P H
Sbjct: 444 QSPKDIDVSPKHVGFATIPRNYTMSFLPRHH 474
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 118/243 (48%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 249
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I AG ET++ + +A+Y ++KNP V++KA E V VD
Sbjct: 250 DDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 304
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+AP + + G + + ++V RD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + + PFG G+R C G F L L L M+L HF
Sbjct: 365 TIWGDDVEEFRPERFENPSAIPQHA---FKPFGNGQRACEGQQFALHEATLVLGMMLKHF 421
Query: 284 EWK 286
+++
Sbjct: 422 DFE 424
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 118/243 (48%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 249
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I AG ET++ + +A+Y ++KNP V++KA E V VD
Sbjct: 250 DDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 304
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+AP + + G + + ++V RD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + + PFG G+R C G F L L L M+L HF
Sbjct: 365 TIWGDDVEEFRPERFENPSAIPQHA---FKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 284 EWK 286
+++
Sbjct: 422 DFE 424
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 118/243 (48%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 204 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 252
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I AG ET++ + +A+Y ++KNP V++KA E V VD
Sbjct: 253 DDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 307
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+AP + + G + + ++V RD
Sbjct: 308 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 367
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + + PFG G+R C G F L L L M+L HF
Sbjct: 368 TIWGDDVEEFRPERFENPSAIPQHA---FKPFGNGQRACIGQQFALHEATLVLGMMLKHF 424
Query: 284 EWK 286
+++
Sbjct: 425 DFE 427
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 118/243 (48%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 249
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I AG ET++ + +A+Y ++KNP V++KA E V VD
Sbjct: 250 DDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 304
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+AP + + G + + ++V RD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + + PFG G+R C G F L L L M+L HF
Sbjct: 365 TIWGDDVEEFRPERFENPSAIPQHA---FKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 284 EWK 286
+++
Sbjct: 422 DFE 424
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 118/243 (48%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 249
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I AG ET++ + +A+Y ++KNP V++KA E V VD
Sbjct: 250 DDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 304
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+AP + + G + + ++V RD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + + PFG G+R C G F L L L M+L HF
Sbjct: 365 TIWGDDVEEFRPERFENPSAIPQHA---FKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 284 EWK 286
+++
Sbjct: 422 DFE 424
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 118/243 (48%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 249
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I AG ET++ + +A+Y ++KNP V++KA E V VD
Sbjct: 250 DDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 304
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+AP + + G + + ++V RD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + + PFG G+R C G F L L L M+L HF
Sbjct: 365 TIWGDDVEEFRPERFENPSAIPQHA---FKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 284 EWK 286
+++
Sbjct: 422 DFE 424
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 117/243 (48%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 249
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I AG ET++ + +A+Y ++KNP V++KA E V VD
Sbjct: 250 DDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 304
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+AP + + G + + ++V RD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + PFG G+R C G F L L L M+L HF
Sbjct: 365 TIWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 284 EWK 286
+++
Sbjct: 422 DFE 424
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 118/243 (48%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 202 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 250
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I AG ET++ + +A+Y ++KNP V++KA E V VD
Sbjct: 251 DDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 305
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+AP + + G + + ++V RD
Sbjct: 306 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 365
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + + PFG G+R C G F L L L M+L HF
Sbjct: 366 TIWGDDVEEFRPERFENPSAIPQHA---FKPFGNGQRACIGQQFALHEATLVLGMMLKHF 422
Query: 284 EWK 286
+++
Sbjct: 423 DFE 425
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 117/243 (48%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 249
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I AG ET++ + +A+Y ++KNP V++KA E V VD
Sbjct: 250 DDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 304
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+AP + + G + + ++V RD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + PFG G+R C G F L L L M+L HF
Sbjct: 365 TIWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 284 EWK 286
+++
Sbjct: 422 DFE 424
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 118/243 (48%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 249
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I AG ET++ + +A+Y ++KNP V++KA E V VD
Sbjct: 250 DDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 304
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+AP + + G + + ++V RD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + + PFG G+R C G F L L L M+L HF
Sbjct: 365 TIWGDDVEEFRPERFENPSAIPQHA---FKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 284 EWK 286
+++
Sbjct: 422 DFE 424
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 118/243 (48%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 202 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 250
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I AG ET++ + +A+Y ++KNP V++KA E V VD
Sbjct: 251 DDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 305
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+AP + + G + + ++V RD
Sbjct: 306 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 365
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + + PFG G+R C G F L L L M+L HF
Sbjct: 366 TIWGDDVEEFRPERFENPSAIPQHA---FKPFGNGQRACIGQQFALHEATLVLGMMLKHF 422
Query: 284 EWK 286
+++
Sbjct: 423 DFE 425
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 117/243 (48%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 249
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I AG ET++ + +A+Y ++KNP V++KA E V VD
Sbjct: 250 DDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 304
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+AP + + G + + ++V RD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + PFG G+R C G F L L L M+L HF
Sbjct: 365 TIWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGKQFALHEATLVLGMMLKHF 421
Query: 284 EWK 286
+++
Sbjct: 422 DFE 424
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 118/243 (48%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 202 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 250
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I AG ET++ + +A+Y ++KNP V++KA E V VD
Sbjct: 251 DDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 305
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+AP + + G + + ++V RD
Sbjct: 306 YKQVKQLKYVGMVLNEALRLWPTAPPFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 365
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + + PFG G+R C G F L L L M+L HF
Sbjct: 366 TIWGDDVEEFRPERFENPSAIPQHA---FKPFGNGQRACIGQQFALHEATLVLGMMLKHF 422
Query: 284 EWK 286
+++
Sbjct: 423 DFE 425
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 118/243 (48%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 204 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 252
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I AG ET++ + +A+Y ++KNP V++KA E V VD
Sbjct: 253 DDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 307
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P++P + + G + + ++V RD
Sbjct: 308 YKQVKQLKYVGMVLNEALRLWPTSPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 367
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + + PFG G+R C G F L L L M+L HF
Sbjct: 368 TIWGDDVEEFRPERFENPSAIPQHA---FKPFGNGQRACIGQQFALHEATLVLGMMLKHF 424
Query: 284 EWK 286
+++
Sbjct: 425 DFE 427
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 118/243 (48%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 249
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I AG E+++ + +A+Y ++KNP V++KA E V VD
Sbjct: 250 DDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 304
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+AP + + G + + ++V RD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + + PFG G+R C G F L L L M+L HF
Sbjct: 365 TIWGDDVEEFRPERFENPSAIPQHA---FKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 284 EWK 286
+++
Sbjct: 422 DFE 424
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 117/243 (48%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 249
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I AG ET++ + +A+Y ++KNP V++KA E V VD
Sbjct: 250 DDENIRYQIITELIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 304
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+AP + + G + + ++V RD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + PFG G+R C G F L L L M+L HF
Sbjct: 365 TIWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 284 EWK 286
+++
Sbjct: 422 DFE 424
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 117/243 (48%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 249
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I AG ET++ + +A+Y ++KNP V++KA E V VD
Sbjct: 250 DDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 304
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+AP + + G + + ++V RD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + P+G G+R C G F L L L M+L HF
Sbjct: 365 TIWGDDVEEFRPERFENPSA---IPQHAFKPYGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 284 EWK 286
+++
Sbjct: 422 DFE 424
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 118/243 (48%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 202 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 250
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I AG E+++ + +A+Y ++KNP V++KA E V VD
Sbjct: 251 DDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 305
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+AP + + G + + ++V RD
Sbjct: 306 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 365
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + + PFG G+R C G F L L L M+L HF
Sbjct: 366 TIWGDDVEEFRPERFENPSAIPQHA---FKPFGNGQRACIGQQFALHEATLVLGMMLKHF 422
Query: 284 EWK 286
+++
Sbjct: 423 DFE 425
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 117/244 (47%), Gaps = 29/244 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHG---DLDSS 108
NK Q ++ ++ + +V+ II D RKA+ + +DL+ +L HG +
Sbjct: 202 NKRQFQEDIKVMNDLVDKIIAD---RKASGEQS-----DDLLTHML----HGKDPETGEP 249
Query: 109 LTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET- 167
L ++I+ I AG ET++ + +A+Y ++KNP V++KA E V VD
Sbjct: 250 LDDENIRYQIITFLIAGHETTSGLLTFALYFLVKNPHVLQKAAEEAARVL-----VDPVP 304
Query: 168 ---GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRD 223
+ ++KY+ +V+ E LR+ P+AP + + G + + ++V RD
Sbjct: 305 SYKQVKQLKYVGMVLNEALRIWPTAPAFSLYAKEDTMLGGEYPLEKGDELMVLIPQLHRD 364
Query: 224 PMYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYH 282
W + E F PERF + S + PFG G+R C G F L L L M+L H
Sbjct: 365 KTVWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKH 421
Query: 283 FEWK 286
F+++
Sbjct: 422 FDFE 425
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 117/243 (48%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 249
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I AG E+++ + +A+Y ++KNP V++KA E V VD
Sbjct: 250 DDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 304
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+AP + + G + + ++V RD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + PFG G+R C G F L L L M+L HF
Sbjct: 365 TIWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 284 EWK 286
+++
Sbjct: 422 DFE 424
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 116/244 (47%), Gaps = 29/244 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHG---DLDSS 108
NK Q ++ ++ + +V+ II D RKA+ + +DL+ +L HG +
Sbjct: 207 NKRQFQEDIKVMNDLVDKIIAD---RKASGEQS-----DDLLTHML----HGKDPETGEP 254
Query: 109 LTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET- 167
L ++I+ I AG ET++ + + +Y ++KNP V++KA E V VD
Sbjct: 255 LDDENIRYQIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAAEEAARVL-----VDPVP 309
Query: 168 ---GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRD 223
+ ++KY+ +V+ E LRL P+AP + + G + + ++V RD
Sbjct: 310 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEIMVLIPQLHRD 369
Query: 224 PMYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYH 282
W + E F PERF + S + PFG G+R C G F L L L M+L H
Sbjct: 370 KTIWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKH 426
Query: 283 FEWK 286
F+++
Sbjct: 427 FDFE 430
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 117/243 (48%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 204 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 252
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I AG ET++ + +A+Y ++KNP V++KA E V VD
Sbjct: 253 DDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 307
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+ P + + G + + ++V RD
Sbjct: 308 YKQVKQLKYVGMVLNEALRLWPTVPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 367
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + + PFG G+R C G F L L L M+L HF
Sbjct: 368 TIWGDDVEEFRPERFENPSAIPQHA---FKPFGNGQRACIGQQFALHEATLVLGMMLKHF 424
Query: 284 EWK 286
+++
Sbjct: 425 DFE 427
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 92/172 (53%), Gaps = 6/172 (3%)
Query: 109 LTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDETG 168
+ + +KA I ++ G T++ T+ W +YEM ++ V + + EV R+ + D +
Sbjct: 272 MLLEDVKANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEVLNA-RRQAEGDISK 330
Query: 169 INEM-KYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYW 227
+ +M LK +KETLRLHP + + R + + IPAK V V +A GRDP ++
Sbjct: 331 MLQMVPLLKASIKETLRLHPISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFF 390
Query: 228 TEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAML 279
+ P+ F P R++ S D +F + FG G R C G +A +E+TL ++
Sbjct: 391 SSPDKFDPTRWL--SKDKDLIHFRNLGFGWGVRQCVGRR--IAELEMTLFLI 438
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 116/243 (47%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 202 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 250
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I AG E ++ + +A+Y ++KNP V++KA E V VD
Sbjct: 251 DDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 305
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+ P + + G + + ++V RD
Sbjct: 306 YKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 365
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + + PFG G+R C G F L L L M+L HF
Sbjct: 366 TIWGDDVEEFRPERFENPSAIPQHA---FKPFGNGQRACIGQQFALHEATLVLGMMLKHF 422
Query: 284 EWK 286
+++
Sbjct: 423 DFE 425
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 116/243 (47%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 249
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I AG E ++ + +A+Y ++KNP V++KA E V VD
Sbjct: 250 DDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 304
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+ P + + G + + ++V RD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + + PFG G+R C G F L L L M+L HF
Sbjct: 365 TIWGDDVEEFRPERFENPSAIPQHA---FKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 284 EWK 286
+++
Sbjct: 422 DFE 424
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 116/243 (47%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 249
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I AG E ++ + +A+Y ++KNP V++KA E V VD
Sbjct: 250 DDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 304
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+AP + + G + + ++V RD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + PFG G+R C G F L L L M+L HF
Sbjct: 365 TIWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 284 EWK 286
+++
Sbjct: 422 DFE 424
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 116/243 (47%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 249
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I G ET++ + +A+Y ++KNP V++KA E V VD
Sbjct: 250 DDENIRYQIITFLICGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 304
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+AP + + G + + ++V RD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + PFG G+R C G F L L L M+L HF
Sbjct: 365 TIWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 284 EWK 286
+++
Sbjct: 422 DFE 424
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 115/243 (47%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSSLTT 111
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L ++ D ++
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTQMLNGKDPETGEPL 249
Query: 112 D--SIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
D +I I AG ET++ + +A+Y ++KNP V++K E V VD
Sbjct: 250 DDGNISYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKVAEEATRVL-----VDPVPS 304
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+AP + + G + + V+V RD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEVMVLIPQLHRDK 364
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + PFG G+R C G F L L L M+L HF
Sbjct: 365 TIWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 284 EWK 286
+++
Sbjct: 422 DFE 424
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 116/243 (47%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 249
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I AG E ++ + +A+Y ++KNP V++KA E V VD
Sbjct: 250 DDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 304
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+AP + + G + + ++V RD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + PFG G+R C G F L L L M+L HF
Sbjct: 365 TIWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 284 EWK 286
+++
Sbjct: 422 DFE 424
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 116/243 (47%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 249
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I G ET++ + +A+Y ++KNP V++KA E V VD
Sbjct: 250 DDENIRYQIITFLIQGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 304
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+AP + + G + + ++V RD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + PFG G+R C G F L L L M+L HF
Sbjct: 365 TIWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 284 EWK 286
+++
Sbjct: 422 DFE 424
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 117/243 (48%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 249
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I AG E ++ + +A+Y ++KNP V++KA E V VD
Sbjct: 250 DDENIRYQIITFLIAGHENTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 304
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+AP + + G + + ++V RD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + + PFG G+R C G F L L L M+L HF
Sbjct: 365 TIWGDDVEEFRPERFENPSAIPQHA---FKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 284 EWK 286
+++
Sbjct: 422 DFE 424
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 116/243 (47%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 249
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I AG E ++ + +A+Y ++KNP V++KA E V VD
Sbjct: 250 DDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 304
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+AP + + G + + ++V RD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + PFG G+R C G F L L L M+L HF
Sbjct: 365 TIWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 284 EWK 286
+++
Sbjct: 422 DFE 424
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 117/243 (48%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 249
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I G ET++ + +A+Y ++KNP V++KA E V VD
Sbjct: 250 DDENIRYQIITFLIEGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 304
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+AP + + G + + ++V RD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + + PFG G+R C G F L L L M+L HF
Sbjct: 365 TIWGDDVEEFRPERFENPSAIPQHA---FKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 284 EWK 286
+++
Sbjct: 422 DFE 424
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 117/243 (48%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 249
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I G ET++ + +A+Y ++KNP V++KA E V VD
Sbjct: 250 DDENIRYQIITFLIMGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 304
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+AP + + G + + ++V RD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + + PFG G+R C G F L L L M+L HF
Sbjct: 365 TIWGDDVEEFRPERFENPSAIPQHA---FKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 284 EWK 286
+++
Sbjct: 422 DFE 424
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 116/243 (47%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 249
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I G ET++ + +A+Y ++KNP V++KA E V VD
Sbjct: 250 DDENIRYQIITFLIKGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 304
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+AP + + G + + ++V RD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + PFG G+R C G F L L L M+L HF
Sbjct: 365 TIWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 284 EWK 286
+++
Sbjct: 422 DFE 424
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 117/243 (48%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 249
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I G ET++ + +A+Y ++KNP V++KA E V VD
Sbjct: 250 DDENIRYQIITFLIHGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 304
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+AP + + G + + ++V RD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + + PFG G+R C G F L L L M+L HF
Sbjct: 365 TIWGDDVEEFRPERFENPSAIPQHA---FKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 284 EWK 286
+++
Sbjct: 422 DFE 424
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 117/243 (48%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 249
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I AG ET++ + +A+Y ++KNP V++KA E V VD
Sbjct: 250 DDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 304
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+AP + + G + + ++V RD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + P+G G+R C G F L L L M+L HF
Sbjct: 365 TIWGDDVEEFRPERFENPSA---IPQHAFKPWGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 284 EWK 286
+++
Sbjct: 422 DFE 424
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 115/243 (47%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 202 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 250
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVD---- 165
++I+ I AG E ++ + +A+Y ++KNP ++KA E V VD
Sbjct: 251 DDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVL-----VDPVPS 305
Query: 166 ETGINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+AP + + G + + ++V RD
Sbjct: 306 HKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 365
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + PFG G+R C G F L L L M+L HF
Sbjct: 366 TVWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 422
Query: 284 EWK 286
+++
Sbjct: 423 DFE 425
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 115/243 (47%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 249
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I AG E ++ + +A+Y ++KNP ++KA E V VD
Sbjct: 250 DDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVL-----VDPVPS 304
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+AP + + G + + ++V RD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + PFG G+R C G F L L L M+L HF
Sbjct: 365 TIWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 284 EWK 286
+++
Sbjct: 422 DFE 424
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 116/243 (47%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 249
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I AG ET++ + +A+Y ++KNP V++KA E V VD
Sbjct: 250 DDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 304
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+AP + + G + + ++V RD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + P G G+R C G F L L L M+L HF
Sbjct: 365 TIWGDDVEEFRPERFENPSA---IPQHAFKPHGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 284 EWK 286
+++
Sbjct: 422 DFE 424
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 116/243 (47%), Gaps = 27/243 (11%)
Query: 52 NKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS--L 109
NK Q ++ ++ + +V+ II D RKA+ G+ D D+L + D ++ L
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIAD---RKAS------GEQSD--DLLTHMLNGKDPETGEPL 249
Query: 110 TTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET-- 167
++I+ I AG ET++ + +A+Y ++KNP V++KA E V VD
Sbjct: 250 DDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPS 304
Query: 168 --GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEING-FNIPAKARVIVNSWATGRDP 224
+ ++KY+ +V+ E LRL P+AP + + G + + ++V RD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 225 MYWTEP-ESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
W + E F PERF + S + P G G+R C G F L L L M+L HF
Sbjct: 365 TIWGDDVEEFRPERFENPSA---IPQHAFKPAGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 284 EWK 286
+++
Sbjct: 422 DFE 424
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 2/183 (1%)
Query: 109 LTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRK-GKVDET 167
LT D + ++ + AG TS+TT W + + ++ + KK E + V +
Sbjct: 248 LTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYD 307
Query: 168 GINEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYW 227
+ ++ L +KETLRL P +++R + G+ IP +V V+ R W
Sbjct: 308 QLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSW 367
Query: 228 TEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKL 287
E F P+R++ + G F Y+PFGAGR C G +F ++ + +L +E+ L
Sbjct: 368 VERLDFNPDRYLQDN-PASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDL 426
Query: 288 PNG 290
+G
Sbjct: 427 IDG 429
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 105/242 (43%), Gaps = 13/242 (5%)
Query: 53 KSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSSLTTD 112
KSQ + L A+ +E II +++ + +ED + +LL D + L+
Sbjct: 195 KSQRARALLLAE--LEKIIKARQQQPPS--------EEDALGILLA--ARDDNNQPLSLP 242
Query: 113 SIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDETGINEM 172
+K I + AG ET + + + ++ + ++ + E ++ + ET + +M
Sbjct: 243 ELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQELTAET-LKKM 301
Query: 173 KYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPES 232
YL V++E LRL P RE C+ GF+ P V T DP + +PE
Sbjct: 302 PYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEK 361
Query: 233 FIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMK 292
F PERF F ++PFG G R C G F ++L L+ F+W L G
Sbjct: 362 FDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQN 421
Query: 293 HE 294
E
Sbjct: 422 LE 423
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 4/170 (2%)
Query: 109 LTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDETG 168
L+ + A + ++ A ET+A ++ W +Y + +NP+ ++ EV+ V
Sbjct: 279 LSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAED 338
Query: 169 INEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWT 228
+ M YLK +KE++RL PS P R + + +P + +N+ G +
Sbjct: 339 LRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFE 398
Query: 229 EPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAM 278
+ F PER++ + K F ++PFG G+R+C G LA ++L LA+
Sbjct: 399 DSHKFRPERWLQK--EKKINPFAHLPFGIGKRMCIGRR--LAELQLHLAL 444
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 111/248 (44%), Gaps = 7/248 (2%)
Query: 75 KKRKATLKNCKTGDDEDLVDV-LLKIQGHGD-LDSSLTTDSIKAVIFDIFGAGSETSATT 132
K+ +A+L + D +D L+K++ D S +++ + D+F AG+ET++TT
Sbjct: 231 KEHQASLD---VNNPRDFIDCFLIKMEQEKDNQKSEFNIENLVGTVADLFVAGTETTSTT 287
Query: 133 VDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPL- 191
+ + + ++K+P V K Q E+ V R + M Y VV E R P
Sbjct: 288 LRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCMQDRSHMPYTDAVVHEIQRYSDLVPTG 347
Query: 192 ILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFE 251
+ + + IP ++ + D + P F P F+D + ++K +++
Sbjct: 348 VPHAVTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKKSDY- 406
Query: 252 YIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQD 311
++PF AG+RIC G + L L +L +F K + +K+ + ++
Sbjct: 407 FMPFSAGKRICAGEGLARMELFLFLTTILQNFNLKSVDDLKNLNTTAVTKGIVSLPPSYQ 466
Query: 312 LCMIPIPH 319
+C IP+ H
Sbjct: 467 ICFIPVHH 474
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 2/160 (1%)
Query: 105 LDSSLTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKV 164
L + L+ ++IKA ++ +T+A + ++E+ +NP V + + E +
Sbjct: 269 LKAELSLEAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAASISEH 328
Query: 165 DETGINEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDP 224
+ E+ L+ +KETLRL+P + R + ++IPA V V ++ GR+
Sbjct: 329 PQKATTELPLLRAALKETLRLYPVGLFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGRNA 388
Query: 225 MYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPG 264
+ PE + P+R++D + G NF ++PFG G R C G
Sbjct: 389 ALFPRPERYNPQRWLD--IRGSGRNFHHVPFGFGMRQCLG 426
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 6/197 (3%)
Query: 90 EDLVDVLLKIQGHGDLDSSLTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKK 149
+DL+ LL + D + I + I GSET A+T+ W + + +P +
Sbjct: 242 DDLLTALL--EAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADR 299
Query: 150 AQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPA 209
+ EV V + E + ++++ V+ E +RL P+ ++ R E+ G+ IPA
Sbjct: 300 IRDEVEAVTGGRPVAFED-VRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESELGGYRIPA 358
Query: 210 KARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGL 269
A +I + +A RDP + + F P+R++ + PF AG+R CP F +
Sbjct: 359 GADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERA-ANVPKYAMKPFSAGKRKCPSDHFSM 417
Query: 270 ASVELTLAMLL--YHFE 284
A + L A L Y FE
Sbjct: 418 AQLTLITAALATKYRFE 434
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 121 IFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGK----------VDETGIN 170
+ A + W++++M++NP MK A EV+ G+ + + +N
Sbjct: 265 VLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELN 324
Query: 171 EMKYLKLVVKETLRLHPSAPLILRECGD----SCEINGFNIPAKARVIVNSWATGRDPMY 226
++ L ++KE+LRL SA L +R + E +NI + + DP
Sbjct: 325 DLPVLDSIIKESLRL-SSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEI 383
Query: 227 WTEPESFIPERFIDHSVDYKGT--------NFEYIPFGAGRRICPGMSFGLASVELTLAM 278
+ +P +F +R++D + K T + Y+PFG+G ICPG F + ++ L +
Sbjct: 384 YPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLIL 443
Query: 279 LLYHFEWKLPNGM-KHEDLDMTEA 301
+L +FE +L G K LD + A
Sbjct: 444 MLSYFELELIEGQAKCPPLDQSRA 467
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 121 IFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGK----------VDETGIN 170
+ A + W++++M++NP MK A EV+ G+ + + +N
Sbjct: 265 VLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELN 324
Query: 171 EMKYLKLVVKETLRLHPSAPLILRECGD----SCEINGFNIPAKARVIVNSWATGRDPMY 226
++ L ++KE+LRL SA L +R + E +NI + + DP
Sbjct: 325 DLPVLDSIIKESLRL-SSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEI 383
Query: 227 WTEPESFIPERFIDHSVDYKGT--------NFEYIPFGAGRRICPGMSFGLASVELTLAM 278
+ +P +F +R++D + K T + Y+PFG+G ICPG F + ++ L +
Sbjct: 384 YPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLIL 443
Query: 279 LLYHFEWKLPNGM-KHEDLDMTEA 301
+L +FE +L G K LD + A
Sbjct: 444 MLSYFELELIEGQAKCPPLDQSRA 467
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 17/228 (7%)
Query: 62 EADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSSLTTDSIKAVIFDI 121
E +I+ II +K +A+ K + DL+ LLK SL + +I
Sbjct: 212 ELQKILGEIIVAREKEEAS----KDNNTSDLLGGLLKAVYRDGTRMSL--HEVCGMIVAA 265
Query: 122 FGAGSETSATTVDWAMYEMM--KNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVV 179
AG TS T W+M +M KN + + K E+ E F + D ++EM + + V
Sbjct: 266 MFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDE-FPAQLNYDNV-MDEMPFAERCV 323
Query: 180 KETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFI 239
+E++R P +++R ++ + +P + + + D + P + PER
Sbjct: 324 RESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER-- 381
Query: 240 DHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKL 287
D VD +I FGAG C G F L V+ LA ++++L
Sbjct: 382 DEKVDGA-----FIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQL 424
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 17/228 (7%)
Query: 62 EADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSSLTTDSIKAVIFDI 121
E +I+ II +K +A+ K + DL+ LLK SL + +I
Sbjct: 221 ELQKILGEIIVAREKEEAS----KDNNTSDLLGGLLKAVYRDGTRMSL--HEVCGMIVAA 274
Query: 122 FGAGSETSATTVDWAMYEMM--KNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVV 179
AG TS T W+M +M KN + + K E+ E F + D ++EM + + V
Sbjct: 275 MFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDE-FPAQLNYDNV-MDEMPFAERCV 332
Query: 180 KETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFI 239
+E++R P +++R ++ + +P + + + D + P + PER
Sbjct: 333 RESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER-- 390
Query: 240 DHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKL 287
D VD +I FGAG C G F L V+ LA ++++L
Sbjct: 391 DEKVDGA-----FIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQL 433
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 17/228 (7%)
Query: 62 EADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSSLTTDSIKAVIFDI 121
E +I+ II +K +A+ K + DL+ LLK SL + +I
Sbjct: 206 ELQKILGEIIVAREKEEAS----KDNNTSDLLGGLLKAVYRDGTRMSL--HEVCGMIVAA 259
Query: 122 FGAGSETSATTVDWAMYEMM--KNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVV 179
AG TS T W+M +M KN + + K E+ E F + D ++EM + + V
Sbjct: 260 MFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDE-FPAQLNYDNV-MDEMPFAERCV 317
Query: 180 KETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFI 239
+E++R P +++R ++ + +P + + + D + P + PER
Sbjct: 318 RESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER-- 375
Query: 240 DHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKL 287
D VD +I FGAG C G F L V+ LA ++++L
Sbjct: 376 DEKVDGA-----FIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQL 418
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 102/227 (44%), Gaps = 15/227 (6%)
Query: 62 EADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSSLTTDSIKAVIFDI 121
E +I+ II RKA N + + L +L + G + ++ + +I
Sbjct: 221 ELQKILSEII---IARKAAAVNKDSSTSDLLSGLLSAVYRDG---TPMSLHEVCGMIVAA 274
Query: 122 FGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDETGI-NEMKYLKLVVK 180
AG TS+ T W+M +M +P +K +A +E+ +++ + +EM + + +
Sbjct: 275 MFAGQHTSSITTTWSMLHLM-HPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCAR 333
Query: 181 ETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFID 240
E++R P +++R+ ++ + +P + + + D + EP + PER D
Sbjct: 334 ESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--D 391
Query: 241 HSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKL 287
V+ +I FGAG C G FGL V+ LA ++++L
Sbjct: 392 EKVEGA-----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 433
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 117/258 (45%), Gaps = 29/258 (11%)
Query: 38 DMFPSIGLLQRLTGNKSQVEKLLQEADRIVENIINDHKKRKAT---LKNCKTGDDEDLVD 94
D+F I L + + EK +++ +E +I + ++R +T L+ C D
Sbjct: 232 DIFFKISWLYK------KYEKSVKDLKDAIEVLIAEKRRRISTEEKLEECM-----DFAT 280
Query: 95 VLLKIQGHGDLDSSLTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEV 154
L+ + GDL T +++ I ++ A +T + ++ + ++ + K+P V + E+
Sbjct: 281 ELILAEKRGDL----TRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEI 336
Query: 155 REVFN-RKGKVDETGINEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARV 213
+ V R K+D+ I ++K ++ + E++R P L++R+ + I+G+ + +
Sbjct: 337 QTVIGERDIKIDD--IQKLKVMENFIYESMRYQPVVDLVMRKALEDDVIDGYPVKKGTNI 394
Query: 214 IVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYI-PFGAGRRICPGMSFGLASV 272
I+N R ++ +P F E F K + Y PFG G R C G + +
Sbjct: 395 ILNIGRMHRLE-FFPKPNEFTLENFA------KNVPYRYFQPFGFGPRGCAGKYIAMVMM 447
Query: 273 ELTLAMLLYHFEWKLPNG 290
+ L LL F K G
Sbjct: 448 KAILVTLLRRFHVKTLQG 465
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 99/227 (43%), Gaps = 15/227 (6%)
Query: 62 EADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSSLTTDSIKAVIFDI 121
E +I+ II K+ + K DL+ LL SL + +I
Sbjct: 221 ELQKILSEIIIARKEEEVN----KDSSTSDLLSGLLSAVYRDGTPMSL--HEVCGMIVAA 274
Query: 122 FGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDETGI-NEMKYLKLVVK 180
AG TS+ T W+M +M +P +K +A +E+ +++ + +EM + + +
Sbjct: 275 MFAGQHTSSITTTWSMLHLM-HPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCAR 333
Query: 181 ETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFID 240
E++R P +++R+ ++ + +P + + + D + EP + PER D
Sbjct: 334 ESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--D 391
Query: 241 HSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKL 287
V+ +I FGAG C G FGL V+ LA ++++L
Sbjct: 392 EKVEGA-----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 433
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 99/227 (43%), Gaps = 15/227 (6%)
Query: 62 EADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSSLTTDSIKAVIFDI 121
E +I+ II K+ + K DL+ LL SL + +I
Sbjct: 208 ELQKILSEIIIARKEEEVN----KDSSTSDLLSGLLSAVYRDGTPMSL--HEVCGMIVAA 261
Query: 122 FGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDETGI-NEMKYLKLVVK 180
AG TS+ T W+M +M +P +K +A +E+ +++ + +EM + + +
Sbjct: 262 MFAGQHTSSITTTWSMLHLM-HPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCAR 320
Query: 181 ETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFID 240
E++R P +++R+ ++ + +P + + + D + EP + PER D
Sbjct: 321 ESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--D 378
Query: 241 HSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKL 287
V+ +I FGAG C G FGL V+ LA ++++L
Sbjct: 379 EKVEGA-----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 420
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 99/227 (43%), Gaps = 15/227 (6%)
Query: 62 EADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSSLTTDSIKAVIFDI 121
E +I+ II K+ + K DL+ LL SL + +I
Sbjct: 207 ELQKILSEIIIARKEEEVN----KDSSTSDLLSGLLSAVYRDGTPMSL--HEVCGMIVAA 260
Query: 122 FGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDETGI-NEMKYLKLVVK 180
AG TS+ T W+M +M +P +K +A +E+ +++ + +EM + + +
Sbjct: 261 MFAGQHTSSITTTWSMLHLM-HPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCAR 319
Query: 181 ETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFID 240
E++R P +++R+ ++ + +P + + + D + EP + PER D
Sbjct: 320 ESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--D 377
Query: 241 HSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKL 287
V+ +I FGAG C G FGL V+ LA ++++L
Sbjct: 378 EKVEGA-----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 419
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 99/227 (43%), Gaps = 15/227 (6%)
Query: 62 EADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSSLTTDSIKAVIFDI 121
E +I+ II K+ + K DL+ LL SL + +I
Sbjct: 209 ELQKILSEIIIARKEEEVN----KDSSTSDLLSGLLSAVYRDGTPMSL--HEVCGMIVAA 262
Query: 122 FGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDETGI-NEMKYLKLVVK 180
AG TS+ T W+M +M +P +K +A +E+ +++ + +EM + + +
Sbjct: 263 MFAGQHTSSITTTWSMLHLM-HPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCAR 321
Query: 181 ETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFID 240
E++R P +++R+ ++ + +P + + + D + EP + PER D
Sbjct: 322 ESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--D 379
Query: 241 HSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKL 287
V+ +I FGAG C G FGL V+ LA ++++L
Sbjct: 380 EKVEGA-----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 421
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 99/227 (43%), Gaps = 15/227 (6%)
Query: 62 EADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSSLTTDSIKAVIFDI 121
E +I+ II K+ + K DL+ LL SL + +I
Sbjct: 208 ELQKILSEIIIARKEEEVN----KDSSTSDLLSGLLSAVYRDGTPMSL--HEVCGMIVAA 261
Query: 122 FGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDETGI-NEMKYLKLVVK 180
AG TS+ T W+M +M +P +K +A +E+ +++ + +EM + + +
Sbjct: 262 MFAGQHTSSITTTWSMLHLM-HPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCAR 320
Query: 181 ETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFID 240
E++R P +++R+ ++ + +P + + + D + EP + PER D
Sbjct: 321 ESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--D 378
Query: 241 HSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKL 287
V+ +I FGAG C G FGL V+ LA ++++L
Sbjct: 379 EKVEGA-----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 420
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 100/229 (43%), Gaps = 18/229 (7%)
Query: 62 EADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS-LTTDSIKAVIFD 120
E I+ II +K +A D + D+L + G D + ++ + +I
Sbjct: 207 ELQDILSEIIIAREKEEAQ-------KDTNTSDLLAGLLGAVYRDGTRMSQHEVCGMIVA 259
Query: 121 IFGAGSETSATTVDWAMYEMM--KNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLV 178
AG TS T W++ +M +N R + K E+ E F + D + EM + +
Sbjct: 260 AMFAGQHTSTITTTWSLLHLMDPRNKRHLAKLHQEIDE-FPAQLNYDNV-MEEMPFAEQC 317
Query: 179 VKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERF 238
+E++R P +++R+ ++ + +P + + + +D + P + PER
Sbjct: 318 ARESIRRDPPLVMLMRKVLKPVQVGKYVVPEGDIIACSPLLSHQDEEAFPNPREWNPER- 376
Query: 239 IDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKL 287
+ K + + FGAG C G FGL V+ LA +L ++++L
Sbjct: 377 -----NMKLVDGAFCGFGAGVHKCIGEKFGLLQVKTVLATVLRDYDFEL 420
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 8/125 (6%)
Query: 169 INEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWT 228
+ + Y +L V+E R +P P ++ E G P +V+++ + + D W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFGPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 327
Query: 229 EPESFIPERFIDHSVDYKGTNFEYIPFGAGRRI----CPGMSFGLASVELTLAMLLYHFE 284
+P+ F PERF D +F +IP G G CPG LA +++ +L+
Sbjct: 328 DPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMR 383
Query: 285 WKLPN 289
+ +P+
Sbjct: 384 YDVPD 388
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 8/125 (6%)
Query: 169 INEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWT 228
+ + Y +L V+E R +P P ++ E G P +V+++ + + D W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 327
Query: 229 EPESFIPERFIDHSVDYKGTNFEYIPFGAGRRI----CPGMSFGLASVELTLAMLLYHFE 284
+P+ F PERF D +F +IP G G CPG LA +++ +L+
Sbjct: 328 DPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMR 383
Query: 285 WKLPN 289
+ +P+
Sbjct: 384 YDVPD 388
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 8/125 (6%)
Query: 169 INEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWT 228
+ + Y +L V+E R +P P ++ E G P +V+++ + + D W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 319
Query: 229 EPESFIPERFIDHSVDYKGTNFEYIPFGAGRRI----CPGMSFGLASVELTLAMLLYHFE 284
+P+ F PERF D +F +IP G G CPG LA +++ +L+
Sbjct: 320 DPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMR 375
Query: 285 WKLPN 289
+ +P+
Sbjct: 376 YDVPD 380
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 8/125 (6%)
Query: 169 INEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWT 228
+ + Y +L V+E R +P P ++ E G P +V+++ + + D W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 319
Query: 229 EPESFIPERFIDHSVDYKGTNFEYIPFGAGRRI----CPGMSFGLASVELTLAMLLYHFE 284
+P+ F PERF D +F +IP G G CPG LA +++ +L+
Sbjct: 320 DPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMR 375
Query: 285 WKLPN 289
+ +P+
Sbjct: 376 YDVPD 380
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 8/125 (6%)
Query: 169 INEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWT 228
+ + Y +L V+E R +P P ++ E G P +V+++ + + D W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 327
Query: 229 EPESFIPERFIDHSVDYKGTNFEYIPFGAGRRI----CPGMSFGLASVELTLAMLLYHFE 284
+P+ F PERF D +F +IP G G CPG LA +++ +L+
Sbjct: 328 DPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMR 383
Query: 285 WKLPN 289
+ +P+
Sbjct: 384 YDVPD 388
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 8/125 (6%)
Query: 169 INEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWT 228
+ + Y +L V+E R +P P ++ E G P +V+++ + + D W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 319
Query: 229 EPESFIPERFIDHSVDYKGTNFEYIPFGAGRRI----CPGMSFGLASVELTLAMLLYHFE 284
+P+ F PERF D +F +IP G G CPG LA +++ +L+
Sbjct: 320 DPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMR 375
Query: 285 WKLPN 289
+ +P+
Sbjct: 376 YDVPD 380
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 80/202 (39%), Gaps = 23/202 (11%)
Query: 80 TLKNCKTGDDEDLVDVLLKIQGHGDLDSSLTTDSIKAVIFDIFGAGSETSATTVDWAMYE 139
+K + DL+ +L + G +L+ I A+I ++ A +E + T+ +Y
Sbjct: 228 VIKERRVNPGSDLISILCTSEYEG---MALSDKDILALILNVLLAATEPADKTLALMIYH 284
Query: 140 MMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPLILRECGDS 199
++ NP M A+ R + R + ETLR P LI R+
Sbjct: 285 LLNNPEQMNDVLAD-RSLVPR-----------------AIAETLRYKPPVQLIPRQLSQD 326
Query: 200 CEINGFNIPAKARVIVNSWATGRDPMYWTEPESF-IPERFIDHSVDYKGTNFEYIPFGAG 258
+ G I V A RDP + +P+ F I + + G ++ FG+G
Sbjct: 327 TVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIKSAFSGAA-RHLAFGSG 385
Query: 259 RRICPGMSFGLASVELTLAMLL 280
C G +F +E+ ++L
Sbjct: 386 IHNCVGTAFAKNEIEIVANIVL 407
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 63/160 (39%), Gaps = 23/160 (14%)
Query: 124 AGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETL 183
AG ET A+ + W+ + P K+ + +E L
Sbjct: 221 AGHETVASALTWSFLLLSHRPDWQKRVA------------------ESEEAALAAFQEAL 262
Query: 184 RLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSV 243
RL+P A ++ R + +P ++++ + T R +Y+ E E+F PERF+
Sbjct: 263 RLYPPAWILTRRLERPLLLGEDRLPQGTTLVLSPYVTQR--LYFPEGEAFQPERFLAERG 320
Query: 244 DYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
G Y PFG G+R+C G F L + L F
Sbjct: 321 TPSG---RYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRF 357
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 73/189 (38%), Gaps = 33/189 (17%)
Query: 90 EDLVDVLLKIQGHGDLDSSLTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKK 149
EDL+ L+ ++ GD LT D I A + AG ET+ + A M++ P
Sbjct: 225 EDLMSGLVAVEESGD---QLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAA 281
Query: 150 AQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPA 209
A+ V++ET+R P L+ R GD I +P
Sbjct: 282 LAADGSRA------------------SAVIEETMRYDPPVQLVSRYAGDDLTIGTHTVPK 323
Query: 210 KARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGL 269
+++ A RDP P+ F P+R ++ FG G C G L
Sbjct: 324 GDTMLLLLAAAHRDPTIVGAPDRFDPDR----------AQIRHLGFGKGAHFCLGAP--L 371
Query: 270 ASVELTLAM 278
A +E T+A+
Sbjct: 372 ARLEATVAL 380
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 52/125 (41%), Gaps = 8/125 (6%)
Query: 176 KLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIP 235
++ V+E R +P P + N V+++ + T DP W P+ F P
Sbjct: 277 EMFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRP 336
Query: 236 ERFIDHSVDYKGTNFEYIPFGAGR----RICPGMSFGLASVELTLAMLLYHFEWKLPNGM 291
ERF + + F+ IP G G CPG + ++ +L L++ E+ +P
Sbjct: 337 ERFAEREENL----FDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQS 392
Query: 292 KHEDL 296
H L
Sbjct: 393 LHYSL 397
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 64/160 (40%), Gaps = 23/160 (14%)
Query: 124 AGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETL 183
AG ET A+ + W+ + P K+ + +E L
Sbjct: 221 AGHETVASALTWSFLLLSHRPDWQKRVA------------------ESEEAALAAFQEAL 262
Query: 184 RLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSV 243
RL+P A ++ R + +P ++++ + T R +++ + E+F PERF++
Sbjct: 263 RLYPPAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQR--LHFPDGEAFRPERFLEERG 320
Query: 244 DYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
G Y PFG G+R+C G F L + L F
Sbjct: 321 TPSG---RYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRF 357
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 22/177 (12%)
Query: 135 WAMYEMMKNPRVMKKAQAEVREVF-------NRKGKVDETGINEMKYLKLVVKETLRLHP 187
W + ++KNP + + E+ + ++ + + ++ L V+ E+LRL
Sbjct: 284 WLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRL-T 342
Query: 188 SAPLILRECGDSCEI-----NGFNIPAKARVIVNSW-ATGRDPMYWTEPESFIPERFI-- 239
+AP I RE + FN+ R+++ + + RDP +T+PE F RF+
Sbjct: 343 AAPFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNP 402
Query: 240 ------DHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNG 290
D D K +P+GAG C G S+ + S++ + ++L H + +L N
Sbjct: 403 DGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINA 459
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 28/180 (15%)
Query: 135 WAMYEMMKNPRVMKKAQAEVREVF-------NRKGKVDETGINEMKYLKLVVKETLRLHP 187
W + ++KNP + + E+ + ++ + + ++ L V+ E+LRL
Sbjct: 272 WLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRL-T 330
Query: 188 SAPLILREC--------GDSCEINGFNIPAKARVIVNSW-ATGRDPMYWTEPESFIPERF 238
+AP I RE D E FN+ R+++ + + RDP +T+PE F RF
Sbjct: 331 AAPFITREVVVDLAMPMADGRE---FNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRF 387
Query: 239 I--------DHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNG 290
+ D D K +P+GAG C G S+ + S++ + ++L H + +L N
Sbjct: 388 LNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINA 447
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 79/189 (41%), Gaps = 37/189 (19%)
Query: 90 EDLVDVLLKIQGHGDLDSSLTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKK 149
+DLV L+ D LT D + ++ G+ET+ + A++ + P ++
Sbjct: 227 DDLVSTLVT-------DDDLTIDDVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTA 279
Query: 150 AQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPA 209
R G D + VV+E LR A +LR ING ++P+
Sbjct: 280 L---------RDGSAD---------VDTVVEEVLRWTSPAMHVLRVTTADVTINGRDLPS 321
Query: 210 KARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGL 269
V+ A RDP + +P++F+P R + +I FG G C G + L
Sbjct: 322 GTPVVAWLPAANRDPAEFDDPDTFLPGRKPN----------RHITFGHGMHHCLGSA--L 369
Query: 270 ASVELTLAM 278
A +EL++ +
Sbjct: 370 ARIELSVVL 378
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 99/231 (42%), Gaps = 41/231 (17%)
Query: 49 LTGNKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS 108
L+ ++ + K+ Q R+ + ++ +KRK + GDD L +++ G LD
Sbjct: 179 LSNDQDILVKVEQGLGRMFDYLVAAIEKRK-----VEPGDD--LTSDIVRAFHDGVLDDY 231
Query: 109 LTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDETG 168
++ ++ + AG ET+ + AMY+ ++P ++ K+ E
Sbjct: 232 ----ELRTLVATVLVAGYETTNHQLALAMYDFAQHP--------------DQWMKIKENP 273
Query: 169 INEMKYLKLVVKETLRLHPSAPLI-LRECGDSCEINGFNIPAKARVIVNSWATGRDPMYW 227
+ V+E LR P+ P+ R + E+NG IP V + + RDP +
Sbjct: 274 ----ELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVF 329
Query: 228 TEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAM 278
+ + F D +V + + I FG G C G + LA +ELT A+
Sbjct: 330 ADADRF------DITVKREAPS---IAFGGGPHFCLGTA--LARLELTEAV 369
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 99/231 (42%), Gaps = 41/231 (17%)
Query: 49 LTGNKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS 108
L+ ++ + K+ Q R+ + ++ +KRK + GDD L +++ G LD
Sbjct: 189 LSNDQDILVKVEQGLGRMFDYLVAAIEKRK-----VEPGDD--LTSDIVRAFHDGVLDDY 241
Query: 109 LTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDETG 168
++ ++ + AG ET+ + AMY+ ++P ++ K+ E
Sbjct: 242 ----ELRTLVATVLVAGYETTNHQLALAMYDFAQHP--------------DQWMKIKENP 283
Query: 169 INEMKYLKLVVKETLRLHPSAPLIL-RECGDSCEINGFNIPAKARVIVNSWATGRDPMYW 227
+ V+E LR P+ P+ R + E+NG IP V + + RDP +
Sbjct: 284 ----ELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVF 339
Query: 228 TEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAM 278
+ + F D +V + + I FG G C G + LA +ELT A+
Sbjct: 340 ADADRF------DITVKREAPS---IAFGGGPHFCLGTA--LARLELTEAV 379
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 109/249 (43%), Gaps = 46/249 (18%)
Query: 43 IGLLQRLTGNKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGH 102
+GL+ R+ + + E ++ ++++ +R+ L+N D++ +LL+ +
Sbjct: 185 VGLVPRVDEETKTLVASVTEGLALLHGVLDE--RRRNPLEN-------DVLTMLLQAEAD 235
Query: 103 GDLDSSLTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKG 162
G S L+T + A++ I AG++T+ + +A+ ++++P ++ +AE + N
Sbjct: 236 G---SRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEPGLMRN--- 289
Query: 163 KVDETGINEMKYLKLVVKETLRLHPSAPLILRECGDSC---EINGFNIPAKARVIVNSWA 219
+DE +++ ++ T+R A L CG S E+ IP+ R
Sbjct: 290 ALDEV----LRFENILRIGTVRF---ARQDLEYCGASIKKGEMVFLLIPSALR------- 335
Query: 220 TGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAML 279
D ++ P+ F R S+ Y G G +CPG+S E+ + +
Sbjct: 336 ---DGTVFSRPDVFDVRRDTSASLAY----------GRGPHVCPGVSLARLEAEIAVGTI 382
Query: 280 LYHF-EWKL 287
F E KL
Sbjct: 383 FRRFPEMKL 391
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 109/249 (43%), Gaps = 46/249 (18%)
Query: 43 IGLLQRLTGNKSQVEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGH 102
+GL+ R+ + + E ++ ++++ +R+ L+N D++ +LL+ +
Sbjct: 185 VGLVPRVDEETKTLVASVTEGLALLHGVLDE--RRRNPLEN-------DVLTMLLQAEAD 235
Query: 103 GDLDSSLTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKG 162
G S L+T + A++ I AG++T+ + +A+ ++++P ++ +AE + N
Sbjct: 236 G---SRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEPGLMRN--- 289
Query: 163 KVDETGINEMKYLKLVVKETLRLHPSAPLILRECGDSC---EINGFNIPAKARVIVNSWA 219
+DE +++ ++ T+R A L CG S E+ IP+ R
Sbjct: 290 ALDEV----LRFDNILRIGTVRF---ARQDLEYCGASIKKGEMVFLLIPSALR------- 335
Query: 220 TGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAML 279
D ++ P+ F R S+ Y G G +CPG+S E+ + +
Sbjct: 336 ---DGTVFSRPDVFDVRRDTSASLAY----------GRGPHVCPGVSLARLEAEIAVGTI 382
Query: 280 LYHF-EWKL 287
F E KL
Sbjct: 383 FRRFPEMKL 391
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 82/217 (37%), Gaps = 40/217 (18%)
Query: 78 KATLKNCKTGDDEDLVDVLLKIQGHGDLDSSLTTDSIKAVIFDIFGAGSETSATTVDWAM 137
K ++ K +D++ +LLK G LT + + + AG ET+ + ++
Sbjct: 192 KELIQKRKRHPQQDMISMLLK----GREKDKLTEEEAASTCILLAIAGHETTVNLISNSV 247
Query: 138 YEMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPLILRECG 197
++++P + K +RE + G V+E LR + R
Sbjct: 248 LCLLQHPEQLLK----LRENPDLIGTA--------------VEECLRYESPTQMTARVAS 289
Query: 198 DSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGA 257
+ +I G I +V + A RDP +T P+ F D + ++ FG
Sbjct: 290 EDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVF----------DITRSPNPHLSFGH 339
Query: 258 GRRICPGMSFGLASVELTLAMLLYH--------FEWK 286
G +C G S ++ + LL FEW+
Sbjct: 340 GHHVCLGSSLARLEAQIAINTLLQRMPSLNLADFEWR 376
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 12/111 (10%)
Query: 175 LKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSW--ATGRDPMYWTEPES 232
+ +V+E LR P P + R + E+ G IPA V+VN+W + RD +P+
Sbjct: 274 IPAIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPAD--VMVNTWVLSANRDSDAHDDPDR 331
Query: 233 FIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
F P R K + FG G C G + L ++ F
Sbjct: 332 FDPSR--------KSGGAAQLSFGHGVHFCLGAPLARLENRVALEEIIARF 374
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 12/111 (10%)
Query: 175 LKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSW--ATGRDPMYWTEPES 232
+ +V+E LR P P + R + E+ G IPA V+VN+W + RD +P+
Sbjct: 294 IPAIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPAD--VMVNTWVLSANRDSDAHDDPDR 351
Query: 233 FIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHF 283
F P R K + FG G C G + L ++ F
Sbjct: 352 FDPSR--------KSGGAAQLSFGHGVHFCLGAPLARLENRVALEEIIARF 394
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 76/188 (40%), Gaps = 29/188 (15%)
Query: 94 DVLLKIQGHGDLDSSLTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAE 153
D++ K+ + ++TT+ + + + AG ET+ + + + ++ P + AE
Sbjct: 219 DLISKLVTDHLVPGNVTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPEL----PAE 274
Query: 154 VREVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPLI-LRECGDSCEINGFNIPAKAR 212
+R+ + + V E LR+ A I LR + E++G +PA
Sbjct: 275 LRK--------------DPDLMPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDG 320
Query: 213 VIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASV 272
VI DP + +PE VD+ T+ ++ FG G C G +
Sbjct: 321 VIALLAGANHDPEQFDDPE----------RVDFHRTDNHHVAFGYGVHQCVGQHLARLEL 370
Query: 273 ELTLAMLL 280
E+ L LL
Sbjct: 371 EVALETLL 378
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 82/200 (41%), Gaps = 36/200 (18%)
Query: 82 KNCKTGDD-EDLVDVLLKIQGHGDLDSSLTTDSIKAVIFDIFGAGSETSATTVDWAMYEM 140
K GDD L+ +G GD L+ + ++ + + AG ET+ +D A++ +
Sbjct: 202 KRATPGDDMTSLLIAARDDEGDGD---RLSPEELRDTLLLMISAGYETTVNVIDQAVHTL 258
Query: 141 MKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAP-LILRECGDS 199
+ P + RKG+V VV+ETLR P+ L LR
Sbjct: 259 LTRPDQL---------ALVRKGEVTWAD---------VVEETLRHEPAVKHLPLRYAVTD 300
Query: 200 CEINGFNIPAKARVIVNSWATG-RDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAG 258
+ A+ I+ S+A R P + + ++F D T E++ FG G
Sbjct: 301 IALPDGRTIARGEPILASYAAANRHPDWHEDADTF----------DATRTVKEHLAFGHG 350
Query: 259 RRICPGMSFGLASVELTLAM 278
C G LA +E+TLA+
Sbjct: 351 VHFCLGAP--LARMEVTLAL 368
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 81/207 (39%), Gaps = 40/207 (19%)
Query: 82 KNCKTGDDEDLVDVLLKIQGHGDLDSSLTTDSIKAVIFDIFGAGSETSATTVDWAMYEMM 141
K GDD L L++ +GD LT I + + + AG ET+ + + A+ +
Sbjct: 205 KRAAPGDD--LTSALIQASENGD---HLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLS 259
Query: 142 KNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLH-PSAPLILRECGDSC 200
+P + G+ + + VV+ETLR P++ +++R +
Sbjct: 260 THPE---------QRALVLSGEAEWSA---------VVEETLRFSTPTSHVLIRFAAEDV 301
Query: 201 EINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVD----YKGTNFEYIPFG 256
+ IPA +IV+ A GRD ER + D + + +I FG
Sbjct: 302 PVGDRVIPAGDALIVSYGALGRD------------ERAHGPTADRFDLTRTSGNRHISFG 349
Query: 257 AGRRICPGMSFGLASVELTLAMLLYHF 283
G +CPG + + L L F
Sbjct: 350 HGPHVCPGAALSRMEAGVALPALYARF 376
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 78/204 (38%), Gaps = 36/204 (17%)
Query: 81 LKNCKTGDD-EDLVDVLLKIQGHGDLDSS-LTTDSIKAVIFDIFGAGSETSATTVDWAMY 138
L + K G D EDL+ L++ D D S LT++ + + + AG ET+ + MY
Sbjct: 221 LIDSKRGQDGEDLLSALVRTS---DEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMY 277
Query: 139 EMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLH-PSAPLILRECG 197
++ +P + +A +M L V+E LR P R
Sbjct: 278 ALLSHPDQLAALRA------------------DMTLLDGAVEEMLRYEGPVESATYRFPV 319
Query: 198 DSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFID-HSVDYKGTNFEYIPFG 256
+ +++G IPA V+V R PERF D H D + ++ FG
Sbjct: 320 EPVDLDGTVIPAGDTVLVVLADAHR-----------TPERFPDPHRFDIRRDTAGHLAFG 368
Query: 257 AGRRICPGMSFGLASVELTLAMLL 280
G C G + + LL
Sbjct: 369 HGIHFCIGAPLARLEARIAVRALL 392
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 78/204 (38%), Gaps = 36/204 (17%)
Query: 81 LKNCKTGDD-EDLVDVLLKIQGHGDLDSS-LTTDSIKAVIFDIFGAGSETSATTVDWAMY 138
L + K G D EDL+ L++ D D S LT++ + + + AG ET+ + MY
Sbjct: 221 LIDSKRGQDGEDLLSALVRTS---DEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMY 277
Query: 139 EMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLH-PSAPLILRECG 197
++ +P + +A +M L V+E LR P R
Sbjct: 278 ALLSHPDQLAALRA------------------DMTLLDGAVEEMLRYEGPVESATYRFPV 319
Query: 198 DSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFID-HSVDYKGTNFEYIPFG 256
+ +++G IPA V+V R PERF D H D + ++ FG
Sbjct: 320 EPVDLDGTVIPAGDTVLVVLADAHR-----------TPERFPDPHRFDIRRDTAGHLAFG 368
Query: 257 AGRRICPGMSFGLASVELTLAMLL 280
G C G + + LL
Sbjct: 369 HGIHFCIGAPLARLEARIAVRALL 392
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 78/204 (38%), Gaps = 36/204 (17%)
Query: 81 LKNCKTGDD-EDLVDVLLKIQGHGDLDSS-LTTDSIKAVIFDIFGAGSETSATTVDWAMY 138
L + K G D EDL+ L++ D D S LT++ + + + AG ET+ + MY
Sbjct: 221 LIDSKRGQDGEDLLSALVRTS---DEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMY 277
Query: 139 EMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLH-PSAPLILRECG 197
++ +P + +A +M L V+E LR P R
Sbjct: 278 ALLSHPDQLAALRA------------------DMTLLDGAVEEMLRYEGPVESATYRFPV 319
Query: 198 DSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFID-HSVDYKGTNFEYIPFG 256
+ +++G IPA V+V R PERF D H D + ++ FG
Sbjct: 320 EPVDLDGTVIPAGDTVLVVLADAHR-----------TPERFPDPHRFDIRRDTAGHLAFG 368
Query: 257 AGRRICPGMSFGLASVELTLAMLL 280
G C G + + LL
Sbjct: 369 HGIHFCIGAPLARLEARIAVRALL 392
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 75/198 (37%), Gaps = 34/198 (17%)
Query: 85 KTGDDED-LVDVLLKIQ-GHGDLDSSLTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMK 142
K + ED L+D L+ Q GDLD D + + + AG ET+ + +++
Sbjct: 206 KQAEPEDGLLDELIARQLEEGDLDH----DEVVMIALVLLVAGHETTVNAIALGALTLIQ 261
Query: 143 NPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPLILRECGDSCEI 202
+P ++ + G V VV+E LR + I+R + E+
Sbjct: 262 HPE-------QIDVLLRDPGAVSG-----------VVEELLRFTSVSDHIVRMAKEDIEV 303
Query: 203 NGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRIC 262
G I A V+V+ RD + P+ F R H V FG G C
Sbjct: 304 GGATIKAGDAVLVSITLMNRDAKAYENPDIFDARRNARHHVG----------FGHGIHQC 353
Query: 263 PGMSFGLASVELTLAMLL 280
G + A +E+ L L
Sbjct: 354 LGQNLARAELEIALGGLF 371
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 78/167 (46%), Gaps = 18/167 (10%)
Query: 135 WAMYEMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPLILR 194
W M ++ +P ++ + E++ + +++E N V+ ETLRL +A LI R
Sbjct: 275 WVMGYLLTHPEALRAVREEIQG--GKHLRLEERQKN-TPVFDSVLWETLRL-TAAALITR 330
Query: 195 ECGDS---CEING--FNIPAKARVIVNSWATGR-DPMYWTEPESFIPERFIDHSVDYK-- 246
+ C NG +++ R+ V + + + DP +PE F +RF++ K
Sbjct: 331 DVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKKD 390
Query: 247 ----GTNFEY--IPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKL 287
G +Y +P+G +CPG F + +++ + +L F+ +L
Sbjct: 391 FFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVEL 437
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 69/178 (38%), Gaps = 35/178 (19%)
Query: 109 LTTD-SIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET 167
LT D IK ++ I G G+ET+ + + + +NP ++ A NR G
Sbjct: 173 LTMDEKIKYIMLLIIG-GNETTTNLIGNMIRVIDENPDIIDDALK------NRSG----- 220
Query: 168 GINEMKYLKLVVKETLRLH-PSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMY 226
V+ETLR + P L R + IN I +VIV + RD +
Sbjct: 221 ----------FVEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETF 270
Query: 227 WTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFE 284
+ EP+ F R H + FG G +C G + L +L HF+
Sbjct: 271 FDEPDLFKIGRREMH-----------LAFGIGIHMCLGAPLARLEASIALNDILNHFK 317
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 51/129 (39%), Gaps = 8/129 (6%)
Query: 156 EVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIV 215
E+F R+ +V N+ ++ E +R+ P LR + EI G I A + +
Sbjct: 245 ELFARRPEVFTAFRNDESARAAIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRF 304
Query: 216 NSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELT 275
A RDP + +P+ F DH+ + + FG G C G A
Sbjct: 305 MIGAANRDPEVFDDPDVF------DHTRPPAASR--NLSFGLGPHSCAGQIISRAEATTV 356
Query: 276 LAMLLYHFE 284
A+L +E
Sbjct: 357 FAVLAERYE 365
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 51/129 (39%), Gaps = 8/129 (6%)
Query: 156 EVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIV 215
E+F R+ +V N+ ++ E +R+ P LR + EI G I A + +
Sbjct: 247 ELFARRPEVFTAFRNDESARAAIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRF 306
Query: 216 NSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELT 275
A RDP + +P+ F DH+ + + FG G C G A
Sbjct: 307 MIGAANRDPEVFDDPDVF------DHTRPPAASR--NLSFGLGPHSCAGQIISRAEATTV 358
Query: 276 LAMLLYHFE 284
A+L +E
Sbjct: 359 FAVLAERYE 367
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 10/106 (9%)
Query: 175 LKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFI 234
L +V+E +R +R E+ G I A +++N A DP + EP F
Sbjct: 322 LPGIVEEAIRWTTPVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFD 381
Query: 235 PERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLL 280
P R + ++ FGAG C G+ + + L +LL
Sbjct: 382 PTRPANR----------HLAFGAGSHQCLGLHLARLEMRVLLDVLL 417
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 63/177 (35%), Gaps = 28/177 (15%)
Query: 104 DLDSSLTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGK 163
D S L+ D I + AG ET+ + A+ + + R+V +
Sbjct: 234 DTGSPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAH-----------RDVLDELRT 282
Query: 164 VDETGINEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRD 223
E+ V+E +R P + R + + +IP +RV+ + RD
Sbjct: 283 TPES-------TPAAVEELMRYDPPVQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRD 335
Query: 224 PMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLL 280
P + +P+ R + V FG G C G + A E+ L LL
Sbjct: 336 PARFPDPDVLDVHRAAERQVG----------FGLGIHYCLGATLARAEAEIGLRALL 382
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 179 VKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERF 238
V+E LR P +R + +I I V V + RD + +P+SFIP+R
Sbjct: 244 VEEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDR- 302
Query: 239 IDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLD 297
T ++ FG+G +C G LA +E +A+ + ++++ +K E +D
Sbjct: 303 ---------TPNPHLSFGSGIHLCLGAP--LARLEARIALEEFAKKFRVKEIVKKEKID 350
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 68/175 (38%), Gaps = 32/175 (18%)
Query: 90 EDLVDVLLKIQGHGDLDSSLTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKK 149
EDL+ ++L G + + ++ IF G ET A+ V A+ ++ +P +
Sbjct: 203 EDLLALMLDAHDRGLMSRNEIVSTVVTFIF----TGHETVASQVGNAVLSLLAHPDQL-- 256
Query: 150 AQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPA 209
++ R+ + L V+E LR PS R+ E+ G +
Sbjct: 257 ------DLLRRRPDL----------LAQAVEECLRYDPSVQSNTRQLDVDVELRGRRLRR 300
Query: 210 KARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPG 264
V+V + A RDP + P+ F ER + FGAG R C G
Sbjct: 301 DDVVVVLAGAANRDPRRYDRPDDFDIER----------DPVPSMSFGAGMRYCLG 345
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 50/130 (38%), Gaps = 9/130 (6%)
Query: 116 AVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDET--GINEMK 173
AV F+ FG T+ W + + + E+R G + T I +M
Sbjct: 272 AVCFNTFGGVKILFPNTLKWIG---LAGENLHTQLAEEIRGAIKSYGDGNVTLEAIEQMP 328
Query: 174 YLKLVVKETLRLHPSAPLILRECGDSCEING----FNIPAKARVIVNSWATGRDPMYWTE 229
K VV E+LR+ P P + + I F + + +DP +
Sbjct: 329 LTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVFDR 388
Query: 230 PESFIPERFI 239
PE ++P+RF+
Sbjct: 389 PEEYVPDRFV 398
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 76/197 (38%), Gaps = 34/197 (17%)
Query: 80 TLKNCKTGDDEDLVDVLLKIQGHGDLDSSLTTDSIKAVIFDIFGAGSETSATTVDWAMYE 139
T K + GDD + + Q G LD + + ++ F + AG ET+A + +
Sbjct: 206 TRKESEPGDDLFSRQIARQRQ-EGTLDHA----GLVSLAFLLLTAGHETTANMISLGVVG 260
Query: 140 MMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPLILRECGDS 199
++ +P + +A G+ ++Y + T RL +
Sbjct: 261 LLSHPEQLTVVKAN-------PGRTPMAVEELLRYFTIADGVTSRL----------ATED 303
Query: 200 CEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGR 259
EI G +I A VIV+ + DP + +P ER H ++ FG G
Sbjct: 304 VEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVERGARH----------HLAFGFGP 353
Query: 260 RICPGMSFGLASVELTL 276
C G + LA +EL +
Sbjct: 354 HQCLGQN--LARMELQI 368
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 12/104 (11%)
Query: 179 VKETLRL--HPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPE 236
+ E LR H +A + R + EI G I A V V+ A RDP + +P+
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPD----- 332
Query: 237 RFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLL 280
+D++ + ++ FG G CPG EL + +L
Sbjct: 333 -----RIDFERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVL 371
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 12/104 (11%)
Query: 179 VKETLRL--HPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPE 236
+ E LR H +A + R + EI G I A V V+ A RDP + +P+
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPD----- 332
Query: 237 RFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLL 280
+D++ + ++ FG G CPG EL + +L
Sbjct: 333 -----RIDFERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVL 371
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 12/104 (11%)
Query: 179 VKETLRL--HPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPE 236
+ E LR H +A + R + EI G I A V V+ A RDP + +P+
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPD----- 332
Query: 237 RFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLL 280
+D++ + ++ FG G CPG EL + +L
Sbjct: 333 -----RIDFERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVL 371
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 12/104 (11%)
Query: 179 VKETLRL--HPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPE 236
+ E LR H +A + R + EI G I A V V+ A RDP + +P+
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPD----- 332
Query: 237 RFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLL 280
+D++ + ++ FG G CPG EL + +L
Sbjct: 333 -----RIDFERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVL 371
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 12/104 (11%)
Query: 179 VKETLRL--HPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPE 236
+ E LR H +A + R + EI G I A V V+ A RDP + +P+
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPD----- 332
Query: 237 RFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLL 280
+D++ + ++ FG G CPG EL + +L
Sbjct: 333 -----RIDFERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVL 371
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 12/104 (11%)
Query: 179 VKETLRL--HPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPE 236
+ E LR H +A + R + EI G I A V V+ A RDP + +P+
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPD----- 332
Query: 237 RFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLL 280
+D++ + ++ FG G CPG EL + +L
Sbjct: 333 -----RIDFERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVL 371
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 12/104 (11%)
Query: 179 VKETLRL--HPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPE 236
+ E LR H +A + R + EI G I A V V+ A RDP + +P+
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPD----- 332
Query: 237 RFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLL 280
+D++ + ++ FG G CPG EL + +L
Sbjct: 333 -----RIDFERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVL 371
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 75/197 (38%), Gaps = 33/197 (16%)
Query: 74 HKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSS-LTTDSIKAVIFDIFGAGSETSATT 132
H L+ +T D+ L+ LL + D+D L+ + + A+ + AG ET+
Sbjct: 188 HGYLSDLLERKRTEPDDALLSSLLAVS---DMDGDRLSQEELVAMAMLLLIAGHETTVNL 244
Query: 133 VDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRL-HPSAPL 191
+ + ++ +P +K AE + + V+E LR P +
Sbjct: 245 IGNGVLALLTHPD-QRKLLAE-----------------DPSLISSAVEEFLRFDSPVSQA 286
Query: 192 ILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFE 251
+R + +G IPA V++ A RD + EP+ +D + D G F
Sbjct: 287 PIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDR------LDITRDASGGVF- 339
Query: 252 YIPFGAGRRICPGMSFG 268
FG G C G
Sbjct: 340 ---FGHGIHFCLGAQLA 353
>pdb|3CY1|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 S279a
Mutant From M. Tuberculosis
Length = 396
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 74/176 (42%), Gaps = 31/176 (17%)
Query: 108 SLTTDSIKAVI-FDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDE 166
S +D + A I FGAG ++ + + A+ +++ P ++R + + K ++
Sbjct: 216 SHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRP--------QLRNLLHEKPELIP 267
Query: 167 TGINEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMY 226
G+ E+ + L + L +A + + GD V+V G +
Sbjct: 268 AGVEELLRINLAFADGLPRLATADI---QVGD--------------VLVRK---GELVLV 307
Query: 227 WTEPESFIPERFIDH-SVDYKGTN-FEYIPFGAGRRICPGMSFGLASVELTLAMLL 280
E +F PE F + S++ N ++ FG G+ CPG + G ++ + LL
Sbjct: 308 LLEGANFDPEHFPNPGSIELDRPNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALL 363
>pdb|4DNZ|A Chain A, The Crystal Structures Of Cyp199a4
pdb|4DNZ|B Chain B, The Crystal Structures Of Cyp199a4
pdb|4DNZ|C Chain C, The Crystal Structures Of Cyp199a4
pdb|4DNZ|D Chain D, The Crystal Structures Of Cyp199a4
pdb|4DO1|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|B Chain B, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|C Chain C, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|D Chain D, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4EGM|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGN|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGO|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGP|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
pdb|4EGP|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
Length = 410
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/171 (17%), Positives = 63/171 (36%), Gaps = 28/171 (16%)
Query: 109 LTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDETG 168
+T D ++ + AG +T+ + A+Y + + P +++ +++ N
Sbjct: 234 ITPDEAPLLVRSLLSAGLDTTVNGIGAAVYCLARFPGELQRLRSDPTLARN--------- 284
Query: 169 INEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWT 228
+E +R R E+ G I +V++ + RDP W+
Sbjct: 285 ---------AFEEAVRFESPVQTFFRTTTREVELGGAVIGEGEKVLMFLGSANRDPRRWS 335
Query: 229 EPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAML 279
+P+ + D ++ FG+G +C G E+ L+ L
Sbjct: 336 DPDLY----------DITRKTSGHVGFGSGVHMCVGQLVARLEGEVMLSAL 376
>pdb|4G1X|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4-(1h-1,2,4-Triazol-1-Yl)quinolin-6-Amine
pdb|4G2G|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4,4'-(1h-1,2,3-Triazole-1,5-Diyl)diphenol
Length = 395
Score = 31.2 bits (69), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 74/176 (42%), Gaps = 31/176 (17%)
Query: 108 SLTTDSIKAVI-FDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDE 166
S +D + A I FGAG ++ + + A+ +++ P ++R + + K ++
Sbjct: 215 SHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRP--------QLRNLLHEKPELIP 266
Query: 167 TGINEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMY 226
G+ E+ + L + L +A + + GD V+V G +
Sbjct: 267 AGVEELLRINLSFADGLPRLATADI---QVGD--------------VLVRK---GELVLV 306
Query: 227 WTEPESFIPERFIDH-SVDYKGTN-FEYIPFGAGRRICPGMSFGLASVELTLAMLL 280
E +F PE F + S++ N ++ FG G+ CPG + G ++ + LL
Sbjct: 307 LLEGANFDPEHFPNPGSIELDRPNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALL 362
>pdb|3CXZ|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 R386l Mutant
From M. Tuberculosis
Length = 396
Score = 31.2 bits (69), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 74/176 (42%), Gaps = 31/176 (17%)
Query: 108 SLTTDSIKAVI-FDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDE 166
S +D + A I FGAG ++ + + A+ +++ P ++R + + K ++
Sbjct: 216 SHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRP--------QLRNLLHEKPELIP 267
Query: 167 TGINEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMY 226
G+ E+ + L + L +A + + GD V+V G +
Sbjct: 268 AGVEELLRINLSFADGLPRLATADI---QVGD--------------VLVRK---GELVLV 307
Query: 227 WTEPESFIPERFIDH-SVDYKGTN-FEYIPFGAGRRICPGMSFGLASVELTLAMLL 280
E +F PE F + S++ N ++ FG G+ CPG + G ++ + LL
Sbjct: 308 LLEGANFDPEHFPNPGSIELDRPNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALL 363
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 31.2 bits (69), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 39/100 (39%), Gaps = 5/100 (5%)
Query: 145 RVMKKAQAEVREVF-NRKGKVDETGINEMKYLKLVVKETLRLHPSAPLILRECGDSCEIN 203
+V + E+R V + G++ I +M+ K VV E LR P I
Sbjct: 316 QVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIE 375
Query: 204 ----GFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFI 239
F + A + RDP + + F+PERF+
Sbjct: 376 SHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFV 415
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 31.2 bits (69), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 39/100 (39%), Gaps = 5/100 (5%)
Query: 145 RVMKKAQAEVREVF-NRKGKVDETGINEMKYLKLVVKETLRLHPSAPLILRECGDSCEIN 203
+V + E+R V + G++ I +M+ K VV E LR P I
Sbjct: 316 QVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIE 375
Query: 204 ----GFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFI 239
F + A + RDP + + F+PERF+
Sbjct: 376 SHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFV 415
>pdb|1N40|A Chain A, Atomic Structure Of Cyp121, A Mycobacterial P450
pdb|1N4G|A Chain A, Structure Of Cyp121, A Mycobacterial P450, In Complex With
Iodopyrazole
pdb|2IJ5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|B Chain B, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|C Chain C, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|D Chain D, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|E Chain E, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|F Chain F, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ7|A Chain A, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|B Chain B, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|C Chain C, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|D Chain D, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|E Chain E, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|F Chain F, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|3G5F|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|3G5H|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|4G44|A Chain A, Structure Of P450 Cyp121 In Complex With Lead Compound
Mb286, 3-((1h- 1,2,4-Triazol-1-Yl)methyl)aniline
pdb|4G45|A Chain A, Structure Of Cytochrome Cyp121 In Complex With
2-Methylquinolin-6- Amine
pdb|4G46|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-Oxo-4,5,6,7- Tetrahydrobenzofuran-3-Carboxylate
pdb|4G47|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-(1h-1,2,4- Triazol-1-Yl)phenol
pdb|4G48|A Chain A, Structure Of Cyp121 In Complex With
4-(4-Phenoxy-1h-Pyrazol-3-Yl) Benzene-1,3-Diol
Length = 396
Score = 31.2 bits (69), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 74/176 (42%), Gaps = 31/176 (17%)
Query: 108 SLTTDSIKAVI-FDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDE 166
S +D + A I FGAG ++ + + A+ +++ P ++R + + K ++
Sbjct: 216 SHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRP--------QLRNLLHEKPELIP 267
Query: 167 TGINEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMY 226
G+ E+ + L + L +A + + GD V+V G +
Sbjct: 268 AGVEELLRINLSFADGLPRLATADI---QVGD--------------VLVRK---GELVLV 307
Query: 227 WTEPESFIPERFIDH-SVDYKGTN-FEYIPFGAGRRICPGMSFGLASVELTLAMLL 280
E +F PE F + S++ N ++ FG G+ CPG + G ++ + LL
Sbjct: 308 LLEGANFDPEHFPNPGSIELDRPNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALL 363
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 30.8 bits (68), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 31/171 (18%), Positives = 60/171 (35%), Gaps = 28/171 (16%)
Query: 109 LTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDETG 168
+T + ++ + AG +T+ + A+Y + + P + +A+ N
Sbjct: 236 ITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRADPSLARN--------- 286
Query: 169 INEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWT 228
+E +R R E+ G I +V++ + RDP W
Sbjct: 287 ---------AFEEAVRFESPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWD 337
Query: 229 EPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAML 279
+P+ + D ++ FG+G +C G E+ LA L
Sbjct: 338 DPDRY----------DITRKTSGHVGFGSGVHMCVGQLVARLEGEVVLAAL 378
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 30.8 bits (68), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 74/197 (37%), Gaps = 33/197 (16%)
Query: 74 HKKRKATLKNCKTGDDEDLVDVLLKIQGH-GDLDSSLTTDSIKAVIFDIFGAGSETSATT 132
H L+ +T D+ L+ LL + GD L+ + + A+ + AG ET+
Sbjct: 188 HGYLSDLLERKRTEPDDALLSSLLAVSDEDGD---RLSQEELVAMAMLLLIAGHETTVNL 244
Query: 133 VDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRL-HPSAPL 191
+ + ++ +P +K AE + + V+E LR P +
Sbjct: 245 IGNGVLALLTHPD-QRKLLAE-----------------DPSLISSAVEEFLRFDSPVSQA 286
Query: 192 ILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFE 251
+R + +G IPA V++ A RD + EP+ +D + D G F
Sbjct: 287 PIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDR------LDITRDASGGVF- 339
Query: 252 YIPFGAGRRICPGMSFG 268
FG G C G
Sbjct: 340 ---FGHGIHFCLGAQLA 353
>pdb|3CY0|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 S237a Mutant
From Mycobacterium Tuberculosis
Length = 396
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 73/176 (41%), Gaps = 31/176 (17%)
Query: 108 SLTTDSIKAVI-FDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDE 166
S +D + A I FGAG + + + A+ +++ P ++R + + K ++
Sbjct: 216 SHVSDELFATIGVTFFGAGVIATGSFLTTALISLIQRP--------QLRNLLHEKPELIP 267
Query: 167 TGINEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMY 226
G+ E+ + L + L +A + + GD V+V G +
Sbjct: 268 AGVEELLRINLSFADGLPRLATADI---QVGD--------------VLVRK---GELVLV 307
Query: 227 WTEPESFIPERFIDH-SVDYKGTN-FEYIPFGAGRRICPGMSFGLASVELTLAMLL 280
E +F PE F + S++ N ++ FG G+ CPG + G ++ + LL
Sbjct: 308 LLEGANFDPEHFPNPGSIELDRPNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALL 363
>pdb|3DH7|A Chain A, Structure Of T. Thermophilus Idi-2 In Complex With Ppi
pdb|3DH7|B Chain B, Structure Of T. Thermophilus Idi-2 In Complex With Ppi
pdb|3DH7|C Chain C, Structure Of T. Thermophilus Idi-2 In Complex With Ppi
pdb|3DH7|D Chain D, Structure Of T. Thermophilus Idi-2 In Complex With Ppi
Length = 332
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Query: 95 VLLKIQGHG-DLDSSLTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMK----- 148
V++K GHG +++L + D+ GAG + A +W + +++P + +
Sbjct: 184 VMVKEVGHGLSREAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPT 243
Query: 149 -KAQAEVREVFNRKGKVDETGI 169
+A EVREV V G+
Sbjct: 244 ARAILEVREVLPHLPLVASGGV 265
>pdb|4APY|A Chain A, Ethylene Glycol-bound Form Of P450 Cyp125a3 From
Mycobacterium Smegmatis
Length = 433
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/238 (18%), Positives = 83/238 (34%), Gaps = 44/238 (18%)
Query: 90 EDLVDVLLKIQGHGDLDSSLTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKK 149
ED+V L++ G+ L+ D + + AG+ET+ ++ M +NP
Sbjct: 220 EDIVTKLIEADIDGE---KLSDDEFGFFVVMLAVAGNETTRNSITHGMIAFAQNP----- 271
Query: 150 AQAEVREVFNRKGKVDETGINEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPA 209
D+ + + + + E +R R + E+ G I
Sbjct: 272 ---------------DQWELYKKERPETAADEIVRWATPVSAFQRTALEDVELGGVQIKK 316
Query: 210 KARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGL 269
RV+++ + D + +P +F R + V + GT Y C G +
Sbjct: 317 GQRVVMSYRSANFDEEVFEDPHTFNILRSPNPHVGFGGTGAHY---------CIGANLAR 367
Query: 270 ASVELTLAMLLYHFEWKLP------------NGMKHEDLDMTEAFGATVRRKQDLCMI 315
++ L + + P NG+KH +D T A A+V C +
Sbjct: 368 MTINLIFNAIADNMPDLKPIGAPERLKSGWLNGIKHWQVDYTGAGKASVSGAPGTCPV 425
>pdb|1VCF|A Chain A, Crystal Structure Of Ipp Isomerase At I422
pdb|1VCF|B Chain B, Crystal Structure Of Ipp Isomerase At I422
pdb|1VCG|A Chain A, Crystal Structure Of Ipp Isomerase At P43212
pdb|1VCG|B Chain B, Crystal Structure Of Ipp Isomerase At P43212
pdb|1VCG|C Chain C, Crystal Structure Of Ipp Isomerase At P43212
pdb|1VCG|D Chain D, Crystal Structure Of Ipp Isomerase At P43212
Length = 332
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 7/82 (8%)
Query: 95 VLLKIQGHG-DLDSSLTTDSIKAVIFDIFGAGSETSATTVDWAMYEMMKNPRVMK----- 148
V +K GHG +++L + D+ GAG + A +W + +++P + +
Sbjct: 184 VXVKEVGHGLSREAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPT 243
Query: 149 -KAQAEVREVFNRKGKVDETGI 169
+A EVREV V G+
Sbjct: 244 ARAILEVREVLPHLPLVASGGV 265
>pdb|3CXV|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 A233g
Mutant From Mycobacterium Tuberculosis
Length = 396
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 73/176 (41%), Gaps = 31/176 (17%)
Query: 108 SLTTDSIKAVI-FDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDE 166
S +D + A I FG G ++ + + A+ +++ P ++R + + K ++
Sbjct: 216 SHVSDELFATIGVTFFGGGVISTGSFLTTALISLIQRP--------QLRNLLHEKPELIP 267
Query: 167 TGINEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMY 226
G+ E+ + L + L +A + + GD V+V G +
Sbjct: 268 AGVEELLRINLSFADGLPRLATADI---QVGD--------------VLVRK---GELVLV 307
Query: 227 WTEPESFIPERFIDH-SVDYKGTN-FEYIPFGAGRRICPGMSFGLASVELTLAMLL 280
E +F PE F + S++ N ++ FG G+ CPG + G ++ + LL
Sbjct: 308 LLEGANFDPEHFPNPGSIELDRPNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALL 363
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 174 YLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESF 233
YLK ++E LR P +R+ + ++ I V V + RD + + E F
Sbjct: 240 YLK-AIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKF 298
Query: 234 IPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAM 278
IP+R + ++ FG+G +C G LA +E +A+
Sbjct: 299 IPDRNPN----------PHLSFGSGIHLCLGAP--LARLEARIAI 331
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 174 YLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESF 233
YLK ++E LR P +R+ + ++ I V V + RD + + E F
Sbjct: 240 YLK-AIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKF 298
Query: 234 IPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAM 278
IP+R + ++ FG+G +C G LA +E +A+
Sbjct: 299 IPDRNPN----------PHLSFGSGIHLCLGAP--LARLEARIAI 331
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 19/120 (15%)
Query: 144 PRVMKKAQAEVREVFNRKGKVDET--GINEMKYLKLVVKETLRLHPSAPL--ILRECGDS 199
PR +K +Q +++E+ +D+ G M+ LK + R+ P L +L+EC
Sbjct: 5 PRRVKLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECPGQ 64
Query: 200 CEINGFNIPAKARVIVNSWATGRDP---------MYWTEPESFIPERFIDHSVDYKGTNF 250
F + +G DP M+ + + FIPE ++ ++ G NF
Sbjct: 65 LNFTAF------LTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNF 118
>pdb|1U0O|C Chain C, The Mouse Von Willebrand Factor A1-Botrocetin Complex
Length = 208
Score = 28.5 bits (62), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 57/130 (43%), Gaps = 4/130 (3%)
Query: 56 VEKLLQEADRIVENIINDHKKRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSSLTTDSIK 115
+E+L RI ++ H +A L+ +L + +I+ G +S T++ +K
Sbjct: 44 MERLHISQKRIRVAVVEYHDGSRAYLELKARKRPSELRRITSQIKYTGSQVAS-TSEVLK 102
Query: 116 AVIFDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDETGIN---EM 172
+F IFG A+ + + + PR+ + V+ + +K V GI +
Sbjct: 103 YTLFQIFGKIDRPEASHITLLLTASQEPPRMARNLVRYVQGLKKKKVIVIPVGIGPHASL 162
Query: 173 KYLKLVVKET 182
K ++L+ K+
Sbjct: 163 KQIRLIEKQA 172
>pdb|3CXX|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 F338h From M.
Tuberculosis
Length = 396
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 73/176 (41%), Gaps = 31/176 (17%)
Query: 108 SLTTDSIKAVI-FDIFGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVDE 166
S +D + A I FGAG ++ + + A+ +++ P ++R + + K ++
Sbjct: 216 SHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRP--------QLRNLLHEKPELIP 267
Query: 167 TGINEMKYLKLVVKETLRLHPSAPLILRECGDSCEINGFNIPAKARVIVNSWATGRDPMY 226
G+ E+ + L + L +A + + GD V+V G +
Sbjct: 268 AGVEELLRINLSFADGLPRLATADI---QVGD--------------VLVRK---GELVLV 307
Query: 227 WTEPESFIPERFIDH-SVDYKGTN-FEYIPFGAGRRICPGMSFGLASVELTLAMLL 280
E +F PE F + S++ N ++ G G+ CPG + G ++ + LL
Sbjct: 308 LLEGANFDPEHFPNPGSIELDRPNPTSHLAHGRGQHFCPGSALGRRHAQIGIEALL 363
>pdb|2XFC|A Chain A, The Chikungunya E1 E2 Envelope Glycoprotein Complex Fit
Into The Semliki Forest Virus Cryo-Em Map
pdb|2XFC|D Chain D, The Chikungunya E1 E2 Envelope Glycoprotein Complex Fit
Into The Semliki Forest Virus Cryo-Em Map
pdb|2XFC|F Chain F, The Chikungunya E1 E2 Envelope Glycoprotein Complex Fit
Into The Semliki Forest Virus Cryo-Em Map
pdb|2XFC|H Chain H, The Chikungunya E1 E2 Envelope Glycoprotein Complex Fit
Into The Semliki Forest Virus Cryo-Em Map
Length = 439
Score = 28.1 bits (61), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 203 NGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKG--TNFEYIPFGAGRR 260
G NI A + T +D + P S F + V YKG N +Y PFGAGR
Sbjct: 138 QGNNITVTAYANGDHAVTVKDAKFIVGPMSSAWTPFDNKIVVYKGDVYNMDYPPFGAGR- 196
Query: 261 ICPGMSFG 268
PG FG
Sbjct: 197 --PGQ-FG 201
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 28.1 bits (61), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 10/83 (12%)
Query: 198 DSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGA 257
+ E++G I A V V+ A RDP + +P+ +D ++ +G
Sbjct: 302 EDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPD----------RIDLDRDPNPHLAYGN 351
Query: 258 GRRICPGMSFGLASVELTLAMLL 280
G C G EL + LL
Sbjct: 352 GHHFCTGAVLARMQTELLVDTLL 374
>pdb|4EBA|G Chain G, Crystal Structure Of The Rna14-Rna15 Complex
pdb|4EBA|I Chain I, Crystal Structure Of The Rna14-Rna15 Complex
pdb|4EBA|H Chain H, Crystal Structure Of The Rna14-Rna15 Complex
Length = 174
Score = 28.1 bits (61), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 52/106 (49%), Gaps = 16/106 (15%)
Query: 16 DQETFVSVIEETTKVISGFNIADMFPSIGLLQRLTGNKSQVEKLLQEADRIVENIINDHK 75
D+ETFV+++EE ++ + IA++ S G+ V++L Q A + + +
Sbjct: 73 DKETFVALLEEAPQL--SYAIAELLLSNGV--------CSVDQLTQLA------MASKQR 116
Query: 76 KRKATLKNCKTGDDEDLVDVLLKIQGHGDLDSSLTTDSIKAVIFDI 121
+ T + G DE+ VD+L ++ D D ++ K ++++
Sbjct: 117 PEEQTDNTVEDGLDEEKVDLLRQVLQLQDSDIAMLPQDEKMAVWEL 162
>pdb|1FEP|A Chain A, Ferric Enterobactin Receptor
Length = 724
Score = 28.1 bits (61), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 18/44 (40%)
Query: 122 FGAGSETSATTVDWAMYEMMKNPRVMKKAQAEVREVFNRKGKVD 165
+ G + TT +W YE +N R+ + FN K D
Sbjct: 293 WNGGWDNGVTTSNWVQYEHTRNSRIPEGLAGGTEGKFNEKATQD 336
>pdb|2XFB|A Chain A, The Chikungunya E1 E2 Envelope Glycoprotein Complex Fit
Into The Sindbis Virus Cryo-Em Map
pdb|2XFB|D Chain D, The Chikungunya E1 E2 Envelope Glycoprotein Complex Fit
Into The Sindbis Virus Cryo-Em Map
pdb|2XFB|F Chain F, The Chikungunya E1 E2 Envelope Glycoprotein Complex Fit
Into The Sindbis Virus Cryo-Em Map
pdb|2XFB|H Chain H, The Chikungunya E1 E2 Envelope Glycoprotein Complex Fit
Into The Sindbis Virus Cryo-Em Map
Length = 391
Score = 27.7 bits (60), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 203 NGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKG--TNFEYIPFGAGRR 260
G NI A + T +D + P S F + V YKG N +Y PFGAGR
Sbjct: 138 QGNNITVTAYANGDHAVTVKDAKFIVGPMSSAWTPFDNKIVVYKGDVYNMDYPPFGAGR- 196
Query: 261 ICPGMSFG 268
PG FG
Sbjct: 197 --PGQ-FG 201
>pdb|3N40|F Chain F, Crystal Structure Of The Immature Envelope Glycoprotein
Complex Of Chikungunya Virus
Length = 393
Score = 27.7 bits (60), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 203 NGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKG--TNFEYIPFGAGRR 260
G NI A + T +D + P S F + V YKG N +Y PFGAGR
Sbjct: 140 QGNNITVTAYANGDHAVTVKDAKFIVGPMSSAWTPFDNKIVVYKGDVYNMDYPPFGAGR- 198
Query: 261 ICPGMSFG 268
PG FG
Sbjct: 199 --PGQ-FG 203
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 27.7 bits (60), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 10/83 (12%)
Query: 198 DSCEINGFNIPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGA 257
+ E++G I A V V+ A RDP + +P+ +D ++ +G
Sbjct: 302 EDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPD----------RIDLDRDPNPHLAYGN 351
Query: 258 GRRICPGMSFGLASVELTLAMLL 280
G C G EL + LL
Sbjct: 352 GHHFCTGAVLARMQTELLVDTLL 374
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,607,206
Number of Sequences: 62578
Number of extensions: 406864
Number of successful extensions: 1278
Number of sequences better than 100.0: 173
Number of HSP's better than 100.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 965
Number of HSP's gapped (non-prelim): 189
length of query: 320
length of database: 14,973,337
effective HSP length: 99
effective length of query: 221
effective length of database: 8,778,115
effective search space: 1939963415
effective search space used: 1939963415
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)