Your job contains 1 sequence.
>020839
MLDSDDDNSSVSSTSTMRSDRMSVSGTEEVQLEKDTLLDEALDALYEKRGSTREKALSSI
IEAFNNTLQHQFVEKKFATLLHQCLSSIKRGSSREIALASHAIGLLALTVGYGENSREIL
EESVAPISQALKSGFDSSKIASLLECLAVITFVGGNDPEETERTMQIMWQIVHPKLGSNV
VATRPSAPIITAMVSAWSFLLTTMDGCSLDSKKWQQSISYFSTLLDKDDRSIRIAAGEAL
ALILETGSLEKFSSEAKGSNDGSREEYIHLQGLKGKILNQVRNLSVEAGGKGSAKKDLTS
QRNLFKDILEFLEVSSYFLL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 020839
(320 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2199231 - symbol:SAT32 "SALT-TOLERANCE 32" spe... 948 2.6e-95 1
UNIPROTKB|F1NXH4 - symbol:IFRD1 "Uncharacterized protein"... 175 2.1e-13 2
UNIPROTKB|Q5S1U6 - symbol:IFRD1 "Interferon-related devel... 186 2.7e-12 1
UNIPROTKB|F1MN39 - symbol:IFRD1 "Uncharacterized protein"... 175 6.3e-11 1
UNIPROTKB|O00458 - symbol:IFRD1 "Interferon-related devel... 168 4.4e-10 1
ASPGD|ASPL0000037897 - symbol:AN3425 species:162425 "Emer... 168 5.0e-10 1
UNIPROTKB|G4MZN7 - symbol:MGG_07026 "Uncharacterized prot... 167 5.3e-10 1
MGI|MGI:1316717 - symbol:Ifrd1 "interferon-related develo... 166 7.5e-10 1
UNIPROTKB|E2R3H7 - symbol:IFRD1 "Uncharacterized protein"... 162 2.3e-09 1
RGD|2867 - symbol:Ifrd1 "interferon-related developmental... 156 1.1e-08 1
FB|FBgn0051694 - symbol:CG31694 species:7227 "Drosophila ... 153 2.3e-08 1
UNIPROTKB|Q12894 - symbol:IFRD2 "Interferon-related devel... 149 9.1e-08 1
ZFIN|ZDB-GENE-040801-140 - symbol:ifrd2 "interferon-relat... 126 9.4e-08 2
ZFIN|ZDB-GENE-030131-6132 - symbol:ifrd1 "interferon-rela... 128 8.7e-07 2
UNIPROTKB|C9JNM6 - symbol:IFRD1 "Interferon-related devel... 100 8.3e-05 1
>TAIR|locus:2199231 [details] [associations]
symbol:SAT32 "SALT-TOLERANCE 32" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0009651 "response to salt
stress" evidence=IMP] InterPro:IPR016024 EMBL:CP002684
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009651 InterPro:IPR006921
InterPro:IPR007701 Pfam:PF05004 Pfam:PF04836 IPI:IPI00533039
RefSeq:NP_973923.1 UniGene:At.24900 ProteinModelPortal:F4HUS5
PRIDE:F4HUS5 DNASU:839669 EnsemblPlants:AT1G27760.3 GeneID:839669
KEGG:ath:AT1G27760 OMA:SPHLDVR PhylomeDB:F4HUS5 Uniprot:F4HUS5
Length = 441
Score = 948 (338.8 bits), Expect = 2.6e-95, P = 2.6e-95
Identities = 183/295 (62%), Positives = 240/295 (81%)
Query: 26 GTEEVQLEKDTLLDEALDALYEKRGSTREKALSSIIEAFNNTLQHQFVEKKFATLLHQCL 85
G +EV + KD LLD++LDALYEKR STRE+AL++I++AFN+ LQ++FVEKKFATLLHQCL
Sbjct: 37 GMDEVTVLKDALLDQSLDALYEKRSSTREQALATIVDAFNSDLQYEFVEKKFATLLHQCL 96
Query: 86 SSIKRGSSREIALASHAIGLLALTVGYGENSREILEESVAPISQALKSGFDSSKIASLLE 145
K+GS++E +LA+H IGLLALTVG G++++E+LEESV P+SQALKSG + KI S+LE
Sbjct: 97 HCTKKGSTKETSLATHVIGLLALTVGLGDHAQEVLEESVTPLSQALKSGREILKITSILE 156
Query: 146 CLAVITFVGGNDPEETERTMQIMWQIVHPKLGSNVVATRPSAPIITAMVSAWSFLLTTMD 205
CLAVITFVGGNDPE+TE++MQI+WQ++HPKLGSNVVAT+PS +I+A+VS+W+FLLTT+D
Sbjct: 157 CLAVITFVGGNDPEQTEKSMQIIWQMIHPKLGSNVVATKPSPAVISAVVSSWAFLLTTVD 216
Query: 206 GCSLDSKKWQQSISYFSTLLDKDDRSIRXXXXXXXXXXXXTGSLEKFSSEAKGSNDGS-- 263
+L K +Q++++Y STLL+KDDRS+R G+LEKF++E KGS +GS
Sbjct: 217 RWTLGPKIFQETVTYLSTLLEKDDRSVRIAAGEALAVIYELGTLEKFAAEVKGSANGSVK 276
Query: 264 -----REEYIHLQGLKGKILNQVRNLSVEAGGKGSAKKDLTSQRNLFKDILEFLE 313
+E +H+ GLK K+ QVR LSVEAGGKGSAKKDL +QRNLFKD++EFLE
Sbjct: 277 EGGVSQEALMHMHGLKAKVTKQVRELSVEAGGKGSAKKDLNTQRNLFKDLVEFLE 331
>UNIPROTKB|F1NXH4 [details] [associations]
symbol:IFRD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007527 "adult
somatic muscle development" evidence=IEA] [GO:0042692 "muscle cell
differentiation" evidence=IEA] InterPro:IPR016024 GO:GO:0005634
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 OMA:LASKMLY
InterPro:IPR006921 InterPro:IPR007701 Pfam:PF05004 Pfam:PF04836
GeneTree:ENSGT00390000013347 EMBL:AADN02010100 IPI:IPI00599038
Ensembl:ENSGALT00000015379 Uniprot:F1NXH4
Length = 434
Score = 175 (66.7 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 55/214 (25%), Positives = 105/214 (49%)
Query: 28 EEVQLEKDTLLDEALDALYEKRGSTREKALSSIIEAFNNTLQHQFVEKKFATLLHQCLSS 87
E Q + + L +D +K TR+ AL S+ AF++ + ++F+ ++ TL
Sbjct: 57 EATQEDLEYKLKGFIDLTLDKSAKTRQAALESLKSAFSSKILYEFIMERRMTLTDSIERC 116
Query: 88 IKRGSSREIALASHAIGLLALTVGYGENSREILEESVAPISQALKSGFDSSKIA--SLLE 145
IK+G S E+ A+ LL + +G G S EI + ++ P+ + + +S A +
Sbjct: 117 IKKGKSEELCAAAGLACLLCVQMGSGIESEEIFK-TLGPVLKKIVCDGTASVQARQACAT 175
Query: 146 CLAVITFVGGNDPEETERTMQIMWQI---VHPK-LGSNVVATRPSAPIITAMVSAWSFLL 201
CL + F+ +D E TM+ + + +P+ +N V++ PS + + + AW+ LL
Sbjct: 176 CLGICCFIVTDDITELYSTMECLESVFTKAYPRDRDTNGVSSTPSTVLHISALLAWTLLL 235
Query: 202 TTMDGCSLDS--KKWQQSISYFSTLLDKDDRSIR 233
T C ++ KK + + ++L DD ++R
Sbjct: 236 TI---CPMNEVKKKIETHLHKLPSMLSCDDVNMR 266
Score = 59 (25.8 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 277 ILNQVRNLSVEAGGKGSAKKDLTSQRNLFKDILEFLE 313
+ ++R L+ + G K AK D QR++F+D+L +E
Sbjct: 295 LTEKLRALATD-GNKHRAKVDKRKQRSVFRDVLRAVE 330
>UNIPROTKB|Q5S1U6 [details] [associations]
symbol:IFRD1 "Interferon-related developmental regulator 1"
species:9823 "Sus scrofa" [GO:0042692 "muscle cell differentiation"
evidence=IEA] [GO:0007527 "adult somatic muscle development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR016024 GO:GO:0007275 GO:GO:0005634 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0007527 GO:GO:0042692
CTD:3475 eggNOG:NOG269852 HOGENOM:HOG000252918 HOVERGEN:HBG052089
OMA:LASKMLY InterPro:IPR006921 InterPro:IPR007701 Pfam:PF05004
Pfam:PF04836 GeneTree:ENSGT00390000013347 OrthoDB:EOG4KSPJR
EMBL:AY789133 RefSeq:NP_001007520.1 UniGene:Ssc.58494
ProteinModelPortal:Q5S1U6 Ensembl:ENSSSCT00000018124 GeneID:493185
KEGG:ssc:493185 Uniprot:Q5S1U6
Length = 450
Score = 186 (70.5 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 78/296 (26%), Positives = 130/296 (43%)
Query: 26 GTEEVQLEKDTLLDEALDALYEKRGSTREKALSSIIEAFNNTLQHQFVEKKFATLLHQCL 85
GT+E LE L +D +K TR+ AL I A + + ++F+ ++ TL
Sbjct: 74 GTQE-DLEYK--LKGLIDLTLDKSAKTRQAALEGIKNALASRMLYEFILERRMTLTDSIE 130
Query: 86 SSIKRGSSREIALASHAIGLLALTVGYGENSREILEESVAPI-SQALKSGFDSSKIA-SL 143
+K+G S E A+ +L + +G G S E+L+ ++ P+ + + G S + +
Sbjct: 131 RCLKKGKSDEQRAAAALASVLCIQLGPGIESEEVLK-TLGPVLKKIICDGTASIQARQTC 189
Query: 144 LECLAVITFVGGNDPEETERTMQIMWQIVHPKL----GSNVVATRPSAPIITAMVSAWSF 199
C V F+ +D E T+Q + I SNV+ + P+ + + + AW+
Sbjct: 190 ATCFGVCCFIATDDITELYSTLQCLENIFTKSYLKEKDSNVICSTPNTALHISSLLAWTL 249
Query: 200 LLTTMDGCSLDS--KKWQQSISYFSTLLDKDDRSIRXXXXXXXXXXXXTGSLEKFSSEAK 257
LLT C L KK + + +LL DD ++R SL A+
Sbjct: 250 LLTI---CPLSEVKKKLEMHVHKLPSLLSSDDVNMRIAAGE---------SLALLFELAR 297
Query: 258 GSNDGSREEYIHLQGLKGKILNQVRNLSVEAGGKGSAKKDLTSQRNLFKDILEFLE 313
G S Y ++ L +R L+ + G K AK D QR++F+DIL +E
Sbjct: 298 GME--SDFFYEDMESLT----QMLRALATD-GNKHRAKVDKRKQRSVFRDILRAVE 346
>UNIPROTKB|F1MN39 [details] [associations]
symbol:IFRD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042692 "muscle cell differentiation" evidence=IEA]
[GO:0007527 "adult somatic muscle development" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR016024
GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0007527 GO:GO:0042692 OMA:LASKMLY InterPro:IPR006921
InterPro:IPR007701 Pfam:PF05004 Pfam:PF04836
GeneTree:ENSGT00390000013347 EMBL:DAAA02010677 IPI:IPI00711940
UniGene:Bt.14054 Ensembl:ENSBTAT00000013950 Uniprot:F1MN39
Length = 450
Score = 175 (66.7 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 75/296 (25%), Positives = 130/296 (43%)
Query: 26 GTEEVQLEKDTLLDEALDALYEKRGSTREKALSSIIEAFNNTLQHQFVEKKFATLLHQCL 85
GT+E LE L +D +K TR+ AL I A + + ++F+ ++ TL
Sbjct: 74 GTQE-DLEYK--LKGFIDLTLDKSAKTRQAALEGIKNALASKMLYEFILERRMTLTDSIE 130
Query: 86 SSIKRGSSREIALASHAIGLLALTVGYGENSREILEESVAPI-SQALKSGFDSSKIA-SL 143
+K+G E A+ +L + +G G S E+L+ ++ PI + + G S + +
Sbjct: 131 RCLKKGKGDEQRAAAALASVLCIQLGPGIESEEVLK-TLGPILKKIICDGTASIQARQTC 189
Query: 144 LECLAVITFVGGNDPEETERTMQIMWQIVHPKL----GSNVVATRPSAPIITAMVSAWSF 199
C V F+ +D E T+Q + I +NV+ + P+ + + + AW+
Sbjct: 190 ATCFGVCCFIATDDITELYSTLQCLENIFTKSYLKEKDTNVICSTPNTALHISSLLAWTL 249
Query: 200 LLTTMDGCSLDSKKWQQSISYFS--TLLDKDDRSIRXXXXXXXXXXXXTGSLEKFSSEAK 257
LLT C ++ K + + + +LL DD ++R SL A+
Sbjct: 250 LLTI---CPINEVKKKLEVHFHKLPSLLSSDDVNMRIAAGE---------SLALLFELAR 297
Query: 258 GSNDGSREEYIHLQGLKGKILNQVRNLSVEAGGKGSAKKDLTSQRNLFKDILEFLE 313
G S Y ++ L +R L+ + G K AK D QR++F+DIL +E
Sbjct: 298 GME--SDFFYEDMESLT----QMLRTLATD-GNKHRAKVDKRKQRSVFRDILRAVE 346
>UNIPROTKB|O00458 [details] [associations]
symbol:IFRD1 "Interferon-related developmental regulator 1"
species:9606 "Homo sapiens" [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007527 "adult somatic muscle development" evidence=IEA]
[GO:0007518 "myoblast cell fate determination" evidence=TAS]
InterPro:IPR016024 GO:GO:0007275 GO:GO:0005634 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0007527 GO:GO:0007518
EMBL:Y10313 EMBL:AK298894 EMBL:AK315967 EMBL:BT019889 EMBL:BT019890
EMBL:AC002459 EMBL:AC005192 EMBL:AC079741 EMBL:BC001272
IPI:IPI00011735 RefSeq:NP_001007246.1 RefSeq:NP_001184008.1
RefSeq:NP_001184009.1 RefSeq:NP_001541.2 UniGene:Hs.7879
ProteinModelPortal:O00458 IntAct:O00458 MINT:MINT-1433046
STRING:O00458 PhosphoSite:O00458 PaxDb:O00458 PRIDE:O00458
DNASU:3475 Ensembl:ENST00000005558 Ensembl:ENST00000403825
Ensembl:ENST00000535603 GeneID:3475 KEGG:hsa:3475 UCSC:uc003vgh.3
CTD:3475 GeneCards:GC07P112063 HGNC:HGNC:5456 HPA:HPA024122
MIM:603502 neXtProt:NX_O00458 Orphanet:98771 PharmGKB:PA29691
eggNOG:NOG269852 HOGENOM:HOG000252918 HOVERGEN:HBG052089
InParanoid:O00458 OMA:LASKMLY ChiTaRS:IFRD1 GenomeRNAi:3475
NextBio:13666 ArrayExpress:O00458 Bgee:O00458 CleanEx:HS_IFRD1
Genevestigator:O00458 GermOnline:ENSG00000006652 InterPro:IPR006921
InterPro:IPR007701 Pfam:PF05004 Pfam:PF04836 Uniprot:O00458
Length = 451
Score = 168 (64.2 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 75/296 (25%), Positives = 129/296 (43%)
Query: 26 GTEEVQLEKDTLLDEALDALYEKRGSTREKALSSIIEAFNNTLQHQFVEKKFATLLHQCL 85
GT+E LE L +D +K TR+ AL I A + + ++F+ ++ TL
Sbjct: 75 GTQE-DLEYK--LKGLIDLTLDKSAKTRQAALEGIKNALASKMLYEFILERRMTLTDSIE 131
Query: 86 SSIKRGSSREIALASHAIGLLALTVGYGENSREILEESVAPISQALKSGFDSSKIA--SL 143
+K+G S E A+ +L + +G G S EIL+ ++ PI + + +S A +
Sbjct: 132 RCLKKGKSDEQRAAAALASVLCIQLGPGIESEEILK-TLGPILKKIICDGSASMQARQTC 190
Query: 144 LECLAVITFVGGNDPEETERTMQIMWQIVHPKL----GSNVVATRPSAPIITAMVSAWSF 199
C V F+ +D E T++ + I + V+ + P+ + + + AW+
Sbjct: 191 ATCFGVCCFIATDDITELYSTLECLENIFTKSYLKEKDTTVICSTPNTVLHISSLLAWTL 250
Query: 200 LLTTMDGCSLDS--KKWQQSISYFSTLLDKDDRSIRXXXXXXXXXXXXTGSLEKFSSEAK 257
LLT C ++ KK + +LL DD ++R SL A+
Sbjct: 251 LLTI---CPINEVKKKLEMHFHKLPSLLSCDDVNMRIAAGE---------SLALLFELAR 298
Query: 258 GSNDGSREEYIHLQGLKGKILNQVRNLSVEAGGKGSAKKDLTSQRNLFKDILEFLE 313
G S Y ++ L +R L+ + G K AK D QR++F+D+L +E
Sbjct: 299 GIE--SDFFYEDMESLT----QMLRALATD-GNKHRAKVDKRKQRSVFRDVLRAVE 347
>ASPGD|ASPL0000037897 [details] [associations]
symbol:AN3425 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR016024 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:BN001306
InterPro:IPR007701 Pfam:PF05004 EMBL:AACD01000056 eggNOG:NOG245594
OMA:TRTIRDS OrthoDB:EOG4QG0P8 RefSeq:XP_661029.1
EnsemblFungi:CADANIAT00009614 GeneID:2873860 KEGG:ani:AN3425.2
HOGENOM:HOG000193686 Uniprot:Q5B7Q5
Length = 479
Score = 168 (64.2 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 63/216 (29%), Positives = 99/216 (45%)
Query: 28 EEVQLEKDT------LLDEALDALYEKRGS--TREKALSSIIEAFNNTLQHQFVEKKFAT 79
E V +EKD LLD D L KR S +RE+ ++ + + ++
Sbjct: 72 ENVDVEKDNSNWAQELLDVVDDILDRKRSSVLSREENYAAYCRLSKFHYVEESIRRRVPD 131
Query: 80 LLHQCLSSIKRGSS-REIALASHAIGLLALTVGYGENSREILEESVAPISQALK-SGFDS 137
LL SIK +S RE LA A+ LLA+T +N+ I E + +++ ++ S DS
Sbjct: 132 LLAAFARSIKSETSVRETTLAMRALELLAITAT--DNT--IFEHTEPLLTRTIRDSSSDS 187
Query: 138 SKIASLLECLAVITFVGGNDPEETERTMQIMWQIVHPKLGSNVVATRPSAPIITAMVSAW 197
K+A++ CL T GG E E M IV G ++ A +A +TA + W
Sbjct: 188 IKVAAI-HCLGTCTMFGGGGDEAIEDQMTFFLDIVASD-GQSIDAQEGAATCVTAALQEW 245
Query: 198 SFLLTTMDGCSLDSKKWQQSISYFSTLLDKDDRSIR 233
F+ T +D +S+++ I F L D S++
Sbjct: 246 GFMATEIDDLESESEEY---IQIFMDQLSSGDPSVQ 278
>UNIPROTKB|G4MZN7 [details] [associations]
symbol:MGG_07026 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR016024 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:CM001232 InterPro:IPR007701 Pfam:PF05004
RefSeq:XP_003715208.1 EnsemblFungi:MGG_07026T0 GeneID:2683040
KEGG:mgr:MGG_07026 Uniprot:G4MZN7
Length = 433
Score = 167 (63.8 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 71/291 (24%), Positives = 134/291 (46%)
Query: 33 EKDTLLDEALDALYEKRGSTREKA---LSSIIEAFNNTLQHQF----VEKKFATLLHQCL 85
E L ++ LDA + S + + S I++A+ + ++H + +EK + +L L
Sbjct: 77 ESSALWEQRLDACITELPSRKRSSGAGRSGILKAYLHLIRHHYAEAKLEKSVSEVLPSLL 136
Query: 86 SSIKRGSSREIALASHAIGLLALTVGYGENSREILEESVAPISQALKSGFDSSKIASLLE 145
SIK G+S E S AI LA+T+ N ++ E+ V + + D A L
Sbjct: 137 RSIKNGTSTEEK--SFAIKALAVTILTYTND-DMCEQIVETLKNVCEDERDEDVKADALY 193
Query: 146 CLAVITFVGGNDPEETERTMQIMWQIVHPKLGSNVVATRPSAPIITAMVSAWSFLLTTMD 205
+++ GG E E ++ + I+ G V A S +++A + +W+F+ T++D
Sbjct: 194 TMSIAIIYGGGLEAEMEDMLEYLTTIIQSD-GDQVNAL-DSGKVVSAALQSWAFVATSLD 251
Query: 206 GCSLDSKKWQQSISYFSTLLDKDDRSIRXXXXXXXXXXXXTGSLEKFSSEAKGSNDGSRE 265
SLD++ ++ ++ FS LD D ++ L + S + ++ G +
Sbjct: 252 --SLDAQSYE-ALEAFSEQLDSGDVDVQISAGVNIAL------LFEVSRNLEEADTGDKL 302
Query: 266 EYIHLQGLKGKILNQVRNLSVEA-GGKGSAKKDLTSQRNLFKDILEFLEVS 315
+H+ K+L V+ +S A G K +K+ + R+ F I+ LE +
Sbjct: 303 N-LHIDP---KVL--VKRMSELAKGSKSISKRSRRNLRSSFASIITSLETN 347
>MGI|MGI:1316717 [details] [associations]
symbol:Ifrd1 "interferon-related developmental regulator 1"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007527 "adult somatic muscle development" evidence=IMP]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0042692
"muscle cell differentiation" evidence=IMP] InterPro:IPR016024
MGI:MGI:1316717 GO:GO:0007275 GO:GO:0005634 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0007527 GO:GO:0042692
EMBL:CH466526 CTD:3475 eggNOG:NOG269852 HOGENOM:HOG000252918
HOVERGEN:HBG052089 OMA:LASKMLY ChiTaRS:IFRD1 InterPro:IPR006921
InterPro:IPR007701 Pfam:PF05004 Pfam:PF04836 EMBL:X17400
EMBL:BC043723 EMBL:V00756 IPI:IPI00113812 PIR:A44989
RefSeq:NP_038590.2 UniGene:Mm.168 ProteinModelPortal:P19182
IntAct:P19182 STRING:P19182 PhosphoSite:P19182 PaxDb:P19182
PRIDE:P19182 Ensembl:ENSMUST00000001672 GeneID:15982 KEGG:mmu:15982
GeneTree:ENSGT00390000013347 InParanoid:Q80XM4 OrthoDB:EOG4KSPJR
NextBio:288772 Bgee:P19182 CleanEx:MM_IFRD1 Genevestigator:P19182
GermOnline:ENSMUSG00000001627 Uniprot:P19182
Length = 449
Score = 166 (63.5 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 76/296 (25%), Positives = 128/296 (43%)
Query: 26 GTEEVQLEKDTLLDEALDALYEKRGSTREKALSSIIEAFNNTLQHQFVEKKFATLLHQCL 85
GT+E LE L +D +K TR+ AL + A ++ + ++FV ++ TL
Sbjct: 73 GTQE-DLEYK--LKGLIDLTLDKSAKTRQAALEGLKNALSSKVLYEFVLERRMTLTDSIE 129
Query: 86 SSIKRGSSREIALASHAIGLLALTVGYGENSREILEESVAPI-SQALKSGFDSSKIA-SL 143
+K+G S E A+ +L + +G G S EIL+ ++ PI + + G S + +
Sbjct: 130 RCLKKGKSDEQRAAAAVASVLCIQLGPGFESEEILK-TLGPILKKIICDGAASIQARQTC 188
Query: 144 LECLAVITFVGGNDPEETERTMQIMWQIVHPKL----GSNVVATRPSAPIITAMVSAWSF 199
C V F+ +D E T++ I +NV + P+ + + + AW+
Sbjct: 189 ATCFGVCCFIATDDITELYSTLECFENIFTKSYLKEKDTNVTCSTPNTVLHISSLLAWTL 248
Query: 200 LLTTMDGCSLDS--KKWQQSISYFSTLLDKDDRSIRXXXXXXXXXXXXTGSLEKFSSEAK 257
LLT C ++ KK + +LL DD ++R SL A+
Sbjct: 249 LLTI---CPINEVKKKLELHFHKLPSLLSCDDVNMRIAAGE---------SLALLFELAR 296
Query: 258 GSNDGSREEYIHLQGLKGKILNQVRNLSVEAGGKGSAKKDLTSQRNLFKDILEFLE 313
G S Y + L +R L+ + G K AK D QR++F+D+L +E
Sbjct: 297 GME--SDFFYEDMDSLT----QMLRALATD-GNKHRAKVDKRKQRSVFRDVLRAVE 345
>UNIPROTKB|E2R3H7 [details] [associations]
symbol:IFRD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042692 "muscle cell differentiation"
evidence=IEA] [GO:0007527 "adult somatic muscle development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR016024 GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0007527 GO:GO:0042692 CTD:3475 OMA:LASKMLY
InterPro:IPR006921 InterPro:IPR007701 Pfam:PF05004 Pfam:PF04836
GeneTree:ENSGT00390000013347 EMBL:AAEX03009446 RefSeq:XP_539525.2
Ensembl:ENSCAFT00000005325 GeneID:482408 KEGG:cfa:482408
NextBio:20857015 Uniprot:E2R3H7
Length = 450
Score = 162 (62.1 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 74/294 (25%), Positives = 124/294 (42%)
Query: 26 GTEEVQLEKDTLLDEALDALYEKRGSTREKALSSIIEAFNNTLQHQFVEKKFATLLHQCL 85
GT+E LE L +D +K TR+ AL I A + + + + ++ TL
Sbjct: 74 GTQE-DLEYK--LKGFIDLTLDKSAKTRQAALEGIKNALASKMLSELILERRMTLTDSIE 130
Query: 86 SSIKRGSSREIALASHAIGLLALTVGYGENSREILEESVAPI-SQALKSGFDSSKIA-SL 143
+K+G S E A+ +L + +G G S E+L+ ++ PI + + G S + +
Sbjct: 131 RCLKKGKSDEQRAAAALASVLCIQLGPGIESEEVLK-TLGPILKKIICDGTASIQARQTC 189
Query: 144 LECLAVITFVGGNDPEETERTMQIMWQIVHPKL----GSNVVATRPSAPIITAMVSAWSF 199
C V F+ D E T++ + + +NV+ P+ + + + AW+
Sbjct: 190 ATCFGVCCFIATEDITELYSTLECLENVFTKSYLKEKDTNVICNTPNTGLHISSLLAWTL 249
Query: 200 LLTTMDGCSLDSKKWQQSISYFSTLLDKDDRSIRXXXXXXXXXXXXTGSLEKFSSEAKGS 259
LLT S KK + +LL DD ++R SL A+G
Sbjct: 250 LLTICP-ISEVKKKLEMHFHKLPSLLSSDDVNMRIAAGE---------SLALMFELARGM 299
Query: 260 NDGSREEYIHLQGLKGKILNQVRNLSVEAGGKGSAKKDLTSQRNLFKDILEFLE 313
S Y ++ L +R L+ + G K AK D QR++F+DIL +E
Sbjct: 300 E--SDFFYEDMESLT----QMLRALATD-GNKHRAKVDKRKQRSVFRDILRAVE 346
>RGD|2867 [details] [associations]
symbol:Ifrd1 "interferon-related developmental regulator 1"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEP] [GO:0007527 "adult somatic muscle
development" evidence=ISO] [GO:0014009 "glial cell proliferation"
evidence=IEP] [GO:0042692 "muscle cell differentiation"
evidence=ISO;TAS] InterPro:IPR016024 RGD:2867 GO:GO:0005886
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0042692 GO:GO:0014009 GO:GO:0007405 CTD:3475
HOVERGEN:HBG052089 InterPro:IPR006921 InterPro:IPR007701 Pfam:PF05004
Pfam:PF04836 EMBL:J04511 IPI:IPI00201507 PIR:A30303
RefSeq:NP_062115.1 UniGene:Rn.3723 ProteinModelPortal:P20695
PRIDE:P20695 GeneID:29596 KEGG:rno:29596 NextBio:609742
Genevestigator:P20695 Uniprot:P20695
Length = 449
Score = 156 (60.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 75/294 (25%), Positives = 126/294 (42%)
Query: 26 GTEEVQLEKDTLLDEALDALYEKRGSTREKALSSIIEAFNNTLQHQFVEKKFATLLHQCL 85
GT+E LE L +D +K TR+ AL + A ++ + ++FV ++ TL
Sbjct: 73 GTQE-DLEYK--LKGLIDLTLDKSAKTRQAALEGVKNALSSKVLYEFVLERRMTLTDSIE 129
Query: 86 SSIKRGSSREIALASHAIGLLALTVGYGENSREILEESVAPI-SQALKSGFDSSKIA-SL 143
+K+G S A+ +L + +G G S EIL+ ++ PI + + G S + +
Sbjct: 130 RCLKKGKSDGQRAAAALASVLCIQLGPGLESEEILK-TLGPILKKIICDGTASIQARQTC 188
Query: 144 LECLAVITFVGGNDPEETERTMQIMWQIVHPKL----GSNVVATRPSAPIITAMVSAWSF 199
C V F+ +D E T++ + I +NV + P+ + + + AW+
Sbjct: 189 ATCFGVCCFIATDDITELYSTLECLEGIFTKSYLKEKDTNVPCSTPNTVLHISSLLAWTL 248
Query: 200 LLTTMDGCSLDSKKWQQSISYFSTLLDKDDRSIRXXXXXXXXXXXXTGSLEKFSSEAKGS 259
LLT S KK + +LL DD ++R SL A+G
Sbjct: 249 LLTICP-ISEVKKKLELHFHKLPSLLSCDDVNMRIAAGE---------SLALLFELARGM 298
Query: 260 NDGSREEYIHLQGLKGKILNQVRNLSVEAGGKGSAKKDLTSQRNLFKDILEFLE 313
S Y + L +R L+ + G K AK D QR++F+D+L +E
Sbjct: 299 E--SDFFYEDMDSLT----QMLRALATD-GNKHRAKVDKRKQRSVFRDVLRAVE 345
>FB|FBgn0051694 [details] [associations]
symbol:CG31694 species:7227 "Drosophila melanogaster"
[GO:0046427 "positive regulation of JAK-STAT cascade" evidence=IMP]
InterPro:IPR016024 SUPFAM:SSF48371 EMBL:AE014134 GO:GO:0046427
eggNOG:NOG269852 InterPro:IPR006921 InterPro:IPR007701 Pfam:PF05004
Pfam:PF04836 GeneTree:ENSGT00390000013347 EMBL:AY119016
RefSeq:NP_722858.1 UniGene:Dm.11419 DIP:DIP-20393N IntAct:Q9VQI5
MINT:MINT-1589628 EnsemblMetazoa:FBtr0077685 GeneID:33489
KEGG:dme:Dmel_CG31694 UCSC:CG31694-RA FlyBase:FBgn0051694
InParanoid:Q9VQI5 OMA:HEIMDES OrthoDB:EOG4P2NHM GenomeRNAi:33489
NextBio:783850 Uniprot:Q9VQI5
Length = 425
Score = 153 (58.9 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 73/298 (24%), Positives = 122/298 (40%)
Query: 27 TEEVQLEK-DTLLDEALDALYEKRGSTREKALSSIIEAFNNTLQHQFVEKKFATLLHQCL 85
T+E+ E+ + ++AL+ EK TR +AL +I E + FVE + TL+
Sbjct: 43 TDELANERFEEKFEKALEQATEKSAQTRVQALQAICELLMHRYMPDFVEDRKMTLMDFVE 102
Query: 86 SSIKRGSSREIALASHAIGLLALTVGYGENSREILEESVAPISQALKSGFDSSKIASLLE 145
SI+RG +E + LL L +G E + + + + Q GFD+ A
Sbjct: 103 KSIRRGKGQEQVWGARLAPLLVLQMGGDEGISKAMNQFLLNTVQDKSVGFDAR--AKCCT 160
Query: 146 CLAVITFVGGNDPEETERTMQIMWQIVHPKL--GSN---VVATRPSAPIITAMVSAWSFL 200
+ +++F+G D E MQ I G + V T + ++AW L
Sbjct: 161 AVGLLSFLGCEDVGELVHLMQSFEAIFAGSYLRGDDKTPVSVTAEAGTFHAEALNAWGLL 220
Query: 201 LTTM---DGCSL--DSKKWQQSISYFSTLLDKDDRSIRXXXXXXXXXXXXTGSLEKFSSE 255
LT + D SL + SI F LL +R +G +
Sbjct: 221 LTLIPSGDFVSLMTTGQNMFPSIKKFLGLLQSTHLDVRMAAGETIALILESGRAHE---- 276
Query: 256 AKGSNDGSREEYIHLQGLKGKILNQVRNLSVEAGGKGSAKKDLTSQRNLFKDILEFLE 313
E++ L+ ++ V+ L+ ++ K AK+D +QR F+D+L +LE
Sbjct: 277 ---------EDF--LEDDIAELSEAVKQLATDSH-KYRAKRDRKAQRATFRDVLRYLE 322
>UNIPROTKB|Q12894 [details] [associations]
symbol:IFRD2 "Interferon-related developmental regulator 2"
species:9606 "Homo sapiens" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR016024
EMBL:U73167 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
UniGene:Hs.741741 GermOnline:ENSG00000186792 eggNOG:NOG269852
HOGENOM:HOG000252918 HOVERGEN:HBG052089 InterPro:IPR006921
InterPro:IPR007701 Pfam:PF05004 Pfam:PF04836 EMBL:BC001327
EMBL:BC001676 EMBL:BC007265 EMBL:BC007437 EMBL:BI826806 EMBL:U09585
IPI:IPI00926673 RefSeq:NP_006755.4 UniGene:Hs.315177
ProteinModelPortal:Q12894 IntAct:Q12894 STRING:Q12894
PhosphoSite:Q12894 DMDM:7387803 PRIDE:Q12894 DNASU:7866
Ensembl:ENST00000417626 Ensembl:ENST00000429673
Ensembl:ENST00000436390 Ensembl:ENST00000571492
Ensembl:ENST00000575115 Ensembl:ENST00000575887 GeneID:7866
KEGG:hsa:7866 UCSC:uc011bdp.2 CTD:7866 GeneCards:GC03M050325
H-InvDB:HIX0003317 HGNC:HGNC:5457 HPA:HPA019702 MIM:602725
neXtProt:NX_Q12894 PharmGKB:PA29692 InParanoid:Q12894
OrthoDB:EOG4NGGMM ChiTaRS:IFRD2 GenomeRNAi:7866 NextBio:30309
ArrayExpress:Q12894 Bgee:Q12894 CleanEx:HS_IFRD2
Genevestigator:Q12894 Uniprot:Q12894
Length = 506
Score = 149 (57.5 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 65/291 (22%), Positives = 128/291 (43%)
Query: 31 QLEKDTLLDEALDALYEKRGSTREKALSSIIEAFNNTLQHQFVEKKFATLLHQCLSSIKR 90
Q + + L E +D L +K TR+ AL S+ A + L F+ ++ TL +K+
Sbjct: 134 QEDLEEKLKEYVDCLTDKSAKTRQGALESLRLALASRLLPDFLLERRLTLADALEKCLKK 193
Query: 91 GSSREIALASHAIGLLALTVGYGENSREILEESVAPISQALKSGFDSSKIASLLECLAVI 150
G E ALA+ +GLL + +G G E+ S+ P+ ++ S +S A+ L C + +
Sbjct: 194 GKGEEQALAAAVLGLLCVQLGPGPKGEELFH-SLQPLLVSVLSDSTASP-AARLHCASAL 251
Query: 151 ---TFVGGNDPEETERTMQIMWQIVHPKLGSNVVATRPSAP-----IITAMVSAWSFLLT 202
+V D ++ + + + G +T P P +++A + AW+ LLT
Sbjct: 252 GLGCYVAAADIQDLVSCLACLESVFSRFYGLGGSSTSPVVPASLHGLLSAALQAWALLLT 311
Query: 203 TMDGCSLDSKKWQQSISYFSTLLDKDDRSIRXXXXXXXXXXXXTGSLEKFSSEAKGSNDG 262
+ S + + LL + ++R L + + + +
Sbjct: 312 ICPSTQI-SHILDRQLPRLPQLLSSESVNLRIAAGETIAL------LFELARDLE----- 359
Query: 263 SREEYIHLQGLKGKILNQVRNLSVEAGGKGSAKKDLTSQRNLFKDILEFLE 313
EE+++ + ++ + + +R L+ ++ K AK D QR+ F+ +L +E
Sbjct: 360 --EEFVY-EDMEA-LCSVLRTLATDSN-KYRAKADRRRQRSTFRAVLHSVE 405
>ZFIN|ZDB-GENE-040801-140 [details] [associations]
symbol:ifrd2 "interferon-related developmental
regulator 2" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR016024
ZFIN:ZDB-GENE-040801-140 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 HOVERGEN:HBG052089 InterPro:IPR006921
InterPro:IPR007701 Pfam:PF05004 Pfam:PF04836 CTD:7866 EMBL:BC078215
IPI:IPI00508958 RefSeq:NP_001003621.1 UniGene:Dr.33127 PRIDE:Q6DC68
GeneID:445227 KEGG:dre:445227 InParanoid:Q6DC68 NextBio:20831989
ArrayExpress:Q6DC68 Bgee:Q6DC68 Uniprot:Q6DC68
Length = 435
Score = 126 (49.4 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 45/186 (24%), Positives = 90/186 (48%)
Query: 28 EEVQLEKDTLLDEALDALYEKRGSTREKALSSIIEAFNNTLQHQFV-EKKFATLLHQCLS 86
+ Q E + L + +D L +K TR AL S+ AF++ + ++F+ E+++ + CL
Sbjct: 61 QTAQEETEDKLKQCIDNLMDKSAKTRLAALESLRMAFSSRVLYEFLLERRYT--ISDCLE 118
Query: 87 -SIKRGSSREIALASHAIGLLALTVGYGENSREILEESVAPISQALKSGFDS-SKIASLL 144
S+K+G E A A+ LL L +G G E + + P+ + DS + +A+
Sbjct: 119 RSLKKGGGEEQAAAATVFALLCLQLGGGVEGEEGFK-MLRPVLSTIL--IDSCASLAARQ 175
Query: 145 EC---LAVITFVGGNDP-EETERTMQIMWQI---VHPKLGSNVVATRPSAPII-TAMVSA 196
C L + +V +D E+ +++ + + +P ++ + + P + +A + A
Sbjct: 176 SCARALGMCCYVSASDDAEDLLKSLGHLESVFVGAYPLGDGSLPSVKAGTPALHSAALQA 235
Query: 197 WSFLLT 202
W+ L T
Sbjct: 236 WALLCT 241
Score = 63 (27.2 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 11/37 (29%), Positives = 24/37 (64%)
Query: 277 ILNQVRNLSVEAGGKGSAKKDLTSQRNLFKDILEFLE 313
+ + ++ L+ + G K AK D QR++F+++L ++E
Sbjct: 300 LCDSLKGLATD-GNKHRAKNDRRKQRSIFREVLHYIE 335
>ZFIN|ZDB-GENE-030131-6132 [details] [associations]
symbol:ifrd1 "interferon-related developmental
regulator 1" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR016024 ZFIN:ZDB-GENE-030131-6132
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 CTD:3475
eggNOG:NOG269852 HOGENOM:HOG000252918 HOVERGEN:HBG052089
OMA:LASKMLY InterPro:IPR006921 InterPro:IPR007701 Pfam:PF05004
Pfam:PF04836 GeneTree:ENSGT00390000013347 OrthoDB:EOG4KSPJR
EMBL:BX950217 EMBL:BC124536 IPI:IPI00650160 RefSeq:NP_001070023.1
UniGene:Dr.74180 Ensembl:ENSDART00000099467 GeneID:555178
KEGG:dre:555178 InParanoid:Q1LUD0 NextBio:20880837 Uniprot:Q1LUD0
Length = 427
Score = 128 (50.1 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 49/215 (22%), Positives = 95/215 (44%)
Query: 27 TEEVQLEK-DTLLDEALDALYEKRGSTREKALSSIIEAFNNTLQHQFVEKKFATLLHQCL 85
TEE+ E L +D+ +K TR+ AL + A + + F+ ++ T+
Sbjct: 49 TEEMAEEDFQYKLKVYIDSTVDKSAKTRQGALDGLKTAMATKILYDFISERRMTITDGIE 108
Query: 86 SSIKRGSSREIALASHAIGLLALTVGYGENSREILEESVAPISQALKSGFDSSKIASLLE 145
+K+G E + A+ LL + +G G S E+ + S+ P+ + + + ++ I +
Sbjct: 109 RCLKKGKGVEQSAAASLACLLCIQLGSGIESEEVFK-SLKPVFKTILND-GTANIQARQA 166
Query: 146 C---LAVITFVGGNDPEETERTMQIMWQIVHPKL----GSNVVATRPSAPIITAMVSAWS 198
C L + T V +D + TM+ + GS + P + T + +W+
Sbjct: 167 CATSLGLCTLVAEDDIMDVYATMECFESLFTRSYIREDGSRPSVSPPVTQLHTNALLSWA 226
Query: 199 FLLTTMDGCSLDSKKWQQSISYFSTLLDKDDRSIR 233
LLT G + + Q+ ++ LL+ DD ++R
Sbjct: 227 LLLTICTGSHIRAIA-QKHLAKLPRLLENDDVNMR 260
Score = 51 (23.0 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 291 KGSAKKDLTSQRNLFKDILEFLE 313
K AK D QR++F+D+L+ +E
Sbjct: 302 KHRAKTDKRKQRSVFRDVLKAVE 324
>UNIPROTKB|C9JNM6 [details] [associations]
symbol:IFRD1 "Interferon-related developmental regulator 1"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0007527 "adult somatic muscle development" evidence=IEA]
[GO:0042692 "muscle cell differentiation" evidence=IEA]
GO:GO:0005634 GO:GO:0007527 GO:GO:0042692 EMBL:AC002459
EMBL:AC005192 EMBL:AC079741 HGNC:HGNC:5456 HOGENOM:HOG000252918
ChiTaRS:IFRD1 InterPro:IPR007701 Pfam:PF05004 IPI:IPI00926238
ProteinModelPortal:C9JNM6 STRING:C9JNM6 PRIDE:C9JNM6
Ensembl:ENST00000440625 ArrayExpress:C9JNM6 Bgee:C9JNM6
Uniprot:C9JNM6
Length = 127
Score = 100 (40.3 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 31/102 (30%), Positives = 51/102 (50%)
Query: 26 GTEEVQLEKDTLLDEALDALYEKRGSTREKALSSIIEAFNNTLQHQFVEKKFATLLHQCL 85
GT+E LE L +D +K TR+ AL I A + + ++F+ ++ TL
Sbjct: 25 GTQE-DLEYK--LKGLIDLTLDKSAKTRQAALEGIKNALASKMLYEFILERRMTLTDSIE 81
Query: 86 SSIKRGSSREIALASHAIGLLALTVGYGENSREILEESVAPI 127
+K+G S E A+ +L + +G G S EIL+ ++ PI
Sbjct: 82 RCLKKGKSDEQRAAAALASVLCIQLGPGIESEEILK-TLGPI 122
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.130 0.356 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 320 285 0.00085 115 3 11 23 0.41 34
33 0.42 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 611 (65 KB)
Total size of DFA: 188 KB (2107 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.99u 0.18s 23.17t Elapsed: 00:00:01
Total cpu time: 22.99u 0.18s 23.17t Elapsed: 00:00:01
Start: Fri May 10 11:37:54 2013 End: Fri May 10 11:37:55 2013