Query 020840
Match_columns 320
No_of_seqs 193 out of 901
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 08:57:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020840.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020840hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zkd_A DUF185; NESG, RPR58, st 100.0 6.8E-60 2.3E-64 463.2 21.3 197 82-299 3-199 (387)
2 4f3n_A Uncharacterized ACR, CO 100.0 1.8E-55 6.3E-60 436.7 22.2 194 82-297 57-255 (432)
3 4gek_A TRNA (CMO5U34)-methyltr 97.8 0.00016 5.4E-09 66.2 11.1 117 126-264 27-154 (261)
4 1kpg_A CFA synthase;, cyclopro 96.9 0.0092 3.2E-07 53.6 11.9 91 148-263 52-143 (287)
5 3fut_A Dimethyladenosine trans 96.9 0.0045 1.6E-07 57.4 9.9 66 124-212 24-89 (271)
6 3hem_A Cyclopropane-fatty-acyl 96.8 0.011 3.8E-07 53.8 12.2 97 143-264 55-152 (302)
7 3bus_A REBM, methyltransferase 96.8 0.013 4.3E-07 52.0 12.1 90 150-263 51-143 (273)
8 2aot_A HMT, histamine N-methyl 96.8 0.0026 8.8E-08 58.0 7.2 73 138-212 29-103 (292)
9 2o57_A Putative sarcosine dime 96.7 0.02 6.8E-07 51.6 12.6 48 157-212 79-126 (297)
10 4htf_A S-adenosylmethionine-de 96.7 0.016 5.3E-07 52.1 11.7 64 139-212 48-111 (285)
11 3gjy_A Spermidine synthase; AP 96.7 0.0043 1.5E-07 59.1 8.2 68 138-212 67-134 (317)
12 2f8l_A Hypothetical protein LM 96.6 0.0082 2.8E-07 56.3 9.9 77 127-212 104-180 (344)
13 2fk8_A Methoxy mycolic acid sy 96.6 0.02 6.7E-07 52.4 12.1 91 149-264 79-170 (318)
14 3dlc_A Putative S-adenosyl-L-m 96.5 0.017 6E-07 48.7 10.2 48 156-212 40-87 (219)
15 3gru_A Dimethyladenosine trans 96.5 0.0087 3E-07 56.2 9.0 63 130-212 31-93 (295)
16 4dzr_A Protein-(glutamine-N5) 96.4 0.0052 1.8E-07 51.8 6.2 61 143-212 15-75 (215)
17 3hnr_A Probable methyltransfer 96.4 0.013 4.5E-07 50.1 8.7 42 162-212 47-88 (220)
18 3lcc_A Putative methyl chlorid 96.3 0.011 3.8E-07 51.5 8.2 85 153-263 60-146 (235)
19 3iv6_A Putative Zn-dependent a 96.3 0.028 9.5E-07 51.8 10.8 51 154-213 39-89 (261)
20 1xtp_A LMAJ004091AAA; SGPP, st 96.2 0.013 4.4E-07 51.2 8.1 57 148-212 81-137 (254)
21 3bkw_A MLL3908 protein, S-aden 96.2 0.025 8.7E-07 48.8 9.9 45 160-212 43-87 (243)
22 3gu3_A Methyltransferase; alph 96.2 0.011 3.6E-07 53.6 7.6 48 159-212 21-68 (284)
23 3dtn_A Putative methyltransfer 96.2 0.027 9.4E-07 48.7 9.7 80 160-265 44-125 (234)
24 3ofk_A Nodulation protein S; N 96.2 0.03 1E-06 47.8 9.9 79 157-263 48-128 (216)
25 3bkx_A SAM-dependent methyltra 96.1 0.06 2E-06 47.7 12.0 68 139-212 22-95 (275)
26 1wzn_A SAM-dependent methyltra 96.1 0.017 5.9E-07 50.5 8.3 56 147-211 28-83 (252)
27 2pbf_A Protein-L-isoaspartate 96.1 0.033 1.1E-06 48.1 10.0 90 111-212 41-130 (227)
28 2p35_A Trans-aconitate 2-methy 96.1 0.034 1.1E-06 48.6 10.0 49 155-210 28-76 (259)
29 2gs9_A Hypothetical protein TT 96.1 0.047 1.6E-06 46.4 10.7 52 147-211 24-76 (211)
30 3sm3_A SAM-dependent methyltra 96.1 0.031 1.1E-06 47.8 9.5 82 161-263 31-115 (235)
31 3ccf_A Cyclopropane-fatty-acyl 96.1 0.011 3.8E-07 53.0 6.9 43 160-211 57-99 (279)
32 3g5l_A Putative S-adenosylmeth 96.1 0.048 1.6E-06 47.8 10.9 45 160-212 44-88 (253)
33 1x19_A CRTF-related protein; m 96.0 0.052 1.8E-06 50.7 11.7 73 132-212 154-234 (359)
34 3p9n_A Possible methyltransfer 96.0 0.022 7.4E-07 48.1 8.3 44 161-212 45-88 (189)
35 1qam_A ERMC' methyltransferase 96.0 0.011 3.6E-07 53.2 6.6 47 157-212 27-73 (244)
36 3tqs_A Ribosomal RNA small sub 96.0 0.0071 2.4E-07 55.4 5.5 47 157-212 26-72 (255)
37 3bxo_A N,N-dimethyltransferase 96.0 0.025 8.5E-07 48.8 8.6 43 160-211 40-82 (239)
38 3l8d_A Methyltransferase; stru 96.0 0.03 1E-06 48.4 9.1 42 161-211 54-95 (242)
39 3hm2_A Precorrin-6Y C5,15-meth 95.9 0.021 7.2E-07 46.9 7.6 49 157-212 22-70 (178)
40 3i9f_A Putative type 11 methyl 95.9 0.014 4.7E-07 48.0 6.3 43 159-210 16-58 (170)
41 1r18_A Protein-L-isoaspartate( 95.9 0.014 4.9E-07 50.8 6.7 99 103-212 34-135 (227)
42 3uzu_A Ribosomal RNA small sub 95.9 0.016 5.6E-07 53.7 7.4 69 124-210 19-87 (279)
43 3ou2_A SAM-dependent methyltra 95.9 0.054 1.8E-06 45.8 10.1 40 161-209 47-86 (218)
44 2yxd_A Probable cobalt-precorr 95.9 0.023 7.8E-07 46.6 7.5 44 160-212 35-78 (183)
45 1pjz_A Thiopurine S-methyltran 95.9 0.017 6E-07 49.8 7.1 50 153-211 15-64 (203)
46 3jwh_A HEN1; methyltransferase 95.8 0.041 1.4E-06 47.2 9.0 44 162-212 31-74 (217)
47 1ne2_A Hypothetical protein TA 95.8 0.03 1E-06 47.5 8.1 45 160-212 51-95 (200)
48 2p7i_A Hypothetical protein; p 95.8 0.03 1E-06 48.1 8.2 42 162-212 44-85 (250)
49 3lkd_A Type I restriction-modi 95.8 0.012 4.3E-07 59.6 6.6 73 127-211 195-268 (542)
50 3vc1_A Geranyl diphosphate 2-C 95.8 0.064 2.2E-06 49.1 10.8 84 158-265 115-201 (312)
51 1wy7_A Hypothetical protein PH 95.8 0.036 1.2E-06 47.1 8.5 68 129-212 26-93 (207)
52 2yqz_A Hypothetical protein TT 95.7 0.07 2.4E-06 46.5 10.6 43 160-211 39-81 (263)
53 3h2b_A SAM-dependent methyltra 95.7 0.055 1.9E-06 45.7 9.5 41 162-211 43-83 (203)
54 3gwz_A MMCR; methyltransferase 95.7 0.083 2.8E-06 49.9 11.7 71 134-212 172-246 (369)
55 3e23_A Uncharacterized protein 95.7 0.051 1.7E-06 46.3 9.3 42 161-211 44-85 (211)
56 3orh_A Guanidinoacetate N-meth 95.7 0.0098 3.4E-07 52.8 4.9 44 161-212 61-104 (236)
57 3mti_A RRNA methylase; SAM-dep 95.7 0.022 7.5E-07 47.6 6.8 44 160-212 22-65 (185)
58 3jwg_A HEN1, methyltransferase 95.7 0.039 1.3E-06 47.3 8.6 44 162-212 31-74 (219)
59 1y8c_A S-adenosylmethionine-de 95.7 0.019 6.5E-07 49.5 6.5 57 146-212 24-80 (246)
60 1ri5_A MRNA capping enzyme; me 95.7 0.032 1.1E-06 49.7 8.2 61 144-212 48-108 (298)
61 1jsx_A Glucose-inhibited divis 95.7 0.023 7.8E-07 48.2 6.9 44 162-212 67-110 (207)
62 3f4k_A Putative methyltransfer 95.6 0.072 2.5E-06 46.5 10.1 82 159-264 45-129 (257)
63 1nkv_A Hypothetical protein YJ 95.6 0.031 1.1E-06 48.8 7.8 48 157-212 33-80 (256)
64 3lbf_A Protein-L-isoaspartate 95.6 0.035 1.2E-06 47.3 7.8 66 128-213 56-121 (210)
65 3pfg_A N-methyltransferase; N, 95.6 0.067 2.3E-06 47.2 9.9 44 160-212 50-93 (263)
66 3e05_A Precorrin-6Y C5,15-meth 95.6 0.03 1E-06 47.7 7.4 49 157-212 37-85 (204)
67 3evz_A Methyltransferase; NYSG 95.6 0.073 2.5E-06 45.9 9.9 45 160-212 55-100 (230)
68 1dus_A MJ0882; hypothetical pr 95.6 0.028 9.5E-07 46.4 6.9 44 160-212 52-95 (194)
69 3khk_A Type I restriction-modi 95.5 0.011 3.9E-07 59.8 5.3 73 127-211 223-303 (544)
70 2okc_A Type I restriction enzy 95.5 0.036 1.2E-06 54.1 8.7 74 127-211 149-228 (445)
71 3dli_A Methyltransferase; PSI- 95.5 0.016 5.3E-07 50.8 5.5 41 161-210 42-82 (240)
72 3dh0_A SAM dependent methyltra 95.5 0.027 9.2E-07 48.1 6.9 50 157-212 34-83 (219)
73 1zq9_A Probable dimethyladenos 95.5 0.025 8.5E-07 52.0 7.1 47 157-212 25-71 (285)
74 3ujc_A Phosphoethanolamine N-m 95.5 0.025 8.5E-07 49.5 6.8 81 156-263 51-134 (266)
75 1qyr_A KSGA, high level kasuga 95.5 0.018 6.1E-07 52.6 6.0 43 161-212 22-64 (252)
76 2yxe_A Protein-L-isoaspartate 95.5 0.041 1.4E-06 47.0 7.9 47 160-212 77-123 (215)
77 2pxx_A Uncharacterized protein 95.5 0.031 1.1E-06 47.1 7.1 76 161-263 43-121 (215)
78 3eey_A Putative rRNA methylase 95.5 0.034 1.2E-06 46.9 7.2 47 161-213 23-69 (197)
79 1l3i_A Precorrin-6Y methyltran 95.5 0.032 1.1E-06 45.9 6.8 46 158-212 31-76 (192)
80 1vbf_A 231AA long hypothetical 95.4 0.042 1.4E-06 47.4 7.8 44 160-212 70-113 (231)
81 3m70_A Tellurite resistance pr 95.4 0.049 1.7E-06 48.8 8.5 43 161-212 121-163 (286)
82 3kkz_A Uncharacterized protein 95.4 0.08 2.7E-06 46.9 9.8 82 159-264 45-129 (267)
83 3mgg_A Methyltransferase; NYSG 95.3 0.087 3E-06 46.7 9.8 81 159-263 36-119 (276)
84 2ih2_A Modification methylase 95.3 0.021 7.3E-07 54.1 6.0 63 126-205 16-78 (421)
85 1u2z_A Histone-lysine N-methyl 95.2 0.019 6.6E-07 56.8 5.6 50 151-207 233-282 (433)
86 3g5t_A Trans-aconitate 3-methy 95.2 0.052 1.8E-06 49.2 8.0 47 160-212 36-82 (299)
87 4e2x_A TCAB9; kijanose, tetron 95.2 0.044 1.5E-06 52.2 7.9 77 110-210 72-148 (416)
88 4fsd_A Arsenic methyltransfera 95.2 0.063 2.2E-06 51.1 9.0 47 160-212 83-129 (383)
89 3ftd_A Dimethyladenosine trans 95.2 0.019 6.5E-07 52.1 5.0 46 157-210 28-73 (249)
90 2fhp_A Methylase, putative; al 95.1 0.039 1.3E-06 45.6 6.5 44 161-212 45-88 (187)
91 3adn_A Spermidine synthase; am 95.1 0.039 1.3E-06 51.4 7.1 62 139-212 67-128 (294)
92 2gb4_A Thiopurine S-methyltran 95.1 0.089 3.1E-06 47.5 9.3 94 161-265 69-168 (252)
93 2xvm_A Tellurite resistance pr 95.1 0.048 1.6E-06 45.5 6.9 43 161-212 33-75 (199)
94 3thr_A Glycine N-methyltransfe 95.1 0.052 1.8E-06 48.6 7.6 41 162-211 59-99 (293)
95 1jg1_A PIMT;, protein-L-isoasp 95.1 0.049 1.7E-06 47.7 7.2 44 161-212 92-135 (235)
96 1vl5_A Unknown conserved prote 95.1 0.03 1E-06 49.4 5.9 44 160-212 37-80 (260)
97 3dr5_A Putative O-methyltransf 95.1 0.065 2.2E-06 47.3 8.0 46 162-213 58-103 (221)
98 3i53_A O-methyltransferase; CO 95.0 0.06 2E-06 49.7 8.0 71 134-212 139-213 (332)
99 1zx0_A Guanidinoacetate N-meth 95.0 0.03 1E-06 49.0 5.7 44 161-212 61-104 (236)
100 1iy9_A Spermidine synthase; ro 95.0 0.055 1.9E-06 49.5 7.7 62 139-212 59-120 (275)
101 1ve3_A Hypothetical protein PH 95.0 0.056 1.9E-06 46.1 7.2 43 161-212 39-81 (227)
102 3bwc_A Spermidine synthase; SA 95.0 0.065 2.2E-06 49.6 8.2 60 140-211 80-139 (304)
103 3e8s_A Putative SAM dependent 95.0 0.03 1E-06 47.5 5.3 40 162-210 54-93 (227)
104 3grz_A L11 mtase, ribosomal pr 95.0 0.085 2.9E-06 44.7 8.2 44 161-212 61-104 (205)
105 2fca_A TRNA (guanine-N(7)-)-me 95.0 0.035 1.2E-06 48.4 5.9 44 162-212 40-83 (213)
106 3cgg_A SAM-dependent methyltra 94.9 0.086 2.9E-06 43.4 7.9 43 160-211 46-88 (195)
107 3fzg_A 16S rRNA methylase; met 94.9 0.061 2.1E-06 48.3 7.4 46 161-213 50-95 (200)
108 3mb5_A SAM-dependent methyltra 94.9 0.074 2.5E-06 46.7 7.9 51 156-212 89-139 (255)
109 1yzh_A TRNA (guanine-N(7)-)-me 94.9 0.04 1.4E-06 47.4 6.1 44 162-212 43-86 (214)
110 3m33_A Uncharacterized protein 94.9 0.059 2E-06 46.9 7.1 62 131-210 28-89 (226)
111 1ws6_A Methyltransferase; stru 94.9 0.068 2.3E-06 43.4 7.1 42 162-212 43-84 (171)
112 3uwp_A Histone-lysine N-methyl 94.9 0.049 1.7E-06 54.2 7.3 65 138-209 151-215 (438)
113 3u81_A Catechol O-methyltransf 94.8 0.058 2E-06 46.8 6.9 45 162-212 60-104 (221)
114 3ocj_A Putative exported prote 94.8 0.027 9.3E-07 51.4 4.9 48 160-213 118-165 (305)
115 2esr_A Methyltransferase; stru 94.8 0.074 2.5E-06 44.0 7.2 44 161-212 32-75 (177)
116 3gdh_A Trimethylguanosine synt 94.8 0.077 2.6E-06 46.2 7.6 42 162-212 80-121 (241)
117 3njr_A Precorrin-6Y methylase; 94.8 0.065 2.2E-06 46.4 7.1 47 157-212 52-98 (204)
118 2hnk_A SAM-dependent O-methylt 94.7 0.1 3.5E-06 45.8 8.3 45 162-212 62-106 (239)
119 2ex4_A Adrenal gland protein A 94.7 0.035 1.2E-06 48.5 5.2 45 161-213 80-124 (241)
120 3mq2_A 16S rRNA methyltransfer 94.7 0.057 1.9E-06 46.3 6.5 40 160-206 27-66 (218)
121 2avd_A Catechol-O-methyltransf 94.7 0.078 2.7E-06 45.7 7.4 45 162-212 71-115 (229)
122 1i9g_A Hypothetical protein RV 94.7 0.078 2.7E-06 47.2 7.6 50 157-212 96-145 (280)
123 1p91_A Ribosomal RNA large sub 94.7 0.1 3.6E-06 46.1 8.3 44 161-211 86-129 (269)
124 2pwy_A TRNA (adenine-N(1)-)-me 94.7 0.089 3E-06 46.0 7.8 50 157-212 93-142 (258)
125 3ntv_A MW1564 protein; rossman 94.7 0.097 3.3E-06 45.9 8.0 44 162-212 73-116 (232)
126 1inl_A Spermidine synthase; be 94.6 0.071 2.4E-06 49.3 7.4 61 140-212 75-135 (296)
127 1uir_A Polyamine aminopropyltr 94.6 0.083 2.8E-06 49.2 7.8 62 139-212 61-122 (314)
128 3c3p_A Methyltransferase; NP_9 94.6 0.098 3.3E-06 44.7 7.7 45 162-212 58-102 (210)
129 1xxl_A YCGJ protein; structura 94.5 0.043 1.5E-06 48.1 5.4 48 156-212 17-64 (239)
130 2b25_A Hypothetical protein; s 94.5 0.068 2.3E-06 49.6 7.0 47 160-212 105-151 (336)
131 2o07_A Spermidine synthase; st 94.5 0.085 2.9E-06 49.1 7.7 63 138-212 78-140 (304)
132 2i7c_A Spermidine synthase; tr 94.5 0.09 3.1E-06 48.2 7.7 63 139-213 62-124 (283)
133 1tw3_A COMT, carminomycin 4-O- 94.5 0.14 4.8E-06 47.5 9.1 70 135-212 154-227 (360)
134 3dxy_A TRNA (guanine-N(7)-)-me 94.5 0.07 2.4E-06 47.0 6.7 43 162-211 36-78 (218)
135 2kw5_A SLR1183 protein; struct 94.5 0.05 1.7E-06 45.9 5.5 41 163-212 32-72 (202)
136 3tr6_A O-methyltransferase; ce 94.5 0.11 3.6E-06 44.7 7.7 45 162-212 66-110 (225)
137 1o54_A SAM-dependent O-methylt 94.5 0.1 3.5E-06 46.8 7.9 50 157-212 109-158 (277)
138 2gpy_A O-methyltransferase; st 94.4 0.1 3.6E-06 45.3 7.7 44 162-212 56-99 (233)
139 1qzz_A RDMB, aclacinomycin-10- 94.4 0.09 3.1E-06 49.1 7.7 48 157-212 179-226 (374)
140 2avn_A Ubiquinone/menaquinone 94.4 0.1 3.6E-06 46.2 7.8 43 161-212 55-97 (260)
141 4dcm_A Ribosomal RNA large sub 94.4 0.12 4.1E-06 49.6 8.7 46 161-213 223-268 (375)
142 3ege_A Putative methyltransfer 94.4 0.073 2.5E-06 47.3 6.6 40 157-205 31-70 (261)
143 3g2m_A PCZA361.24; SAM-depende 94.4 0.059 2E-06 48.8 6.1 42 162-212 84-125 (299)
144 3duw_A OMT, O-methyltransferas 94.4 0.12 4E-06 44.5 7.7 45 162-212 60-104 (223)
145 1fbn_A MJ fibrillarin homologu 94.4 0.044 1.5E-06 47.9 5.1 46 160-212 74-119 (230)
146 3d2l_A SAM-dependent methyltra 94.4 0.076 2.6E-06 45.8 6.5 41 162-212 35-75 (243)
147 2h1r_A Dimethyladenosine trans 94.3 0.042 1.4E-06 50.9 5.2 67 124-212 19-85 (299)
148 1i4w_A Mitochondrial replicati 94.3 0.065 2.2E-06 51.7 6.6 82 113-211 15-102 (353)
149 3c3y_A Pfomt, O-methyltransfer 94.3 0.12 4.3E-06 45.6 8.0 45 162-212 72-116 (237)
150 1o9g_A RRNA methyltransferase; 94.3 0.11 3.9E-06 45.7 7.7 48 160-212 51-98 (250)
151 2yvl_A TRMI protein, hypotheti 94.3 0.12 4E-06 44.9 7.7 47 157-212 88-134 (248)
152 2b2c_A Spermidine synthase; be 94.3 0.096 3.3E-06 49.2 7.6 62 140-213 93-154 (314)
153 3cc8_A Putative methyltransfer 94.3 0.08 2.7E-06 44.9 6.4 43 160-211 32-74 (230)
154 4gqb_A Protein arginine N-meth 94.3 0.19 6.6E-06 52.0 10.4 61 139-202 335-396 (637)
155 2ozv_A Hypothetical protein AT 94.2 0.072 2.5E-06 47.9 6.3 47 160-213 36-82 (260)
156 3q87_B N6 adenine specific DNA 94.2 0.061 2.1E-06 45.0 5.5 35 162-206 25-59 (170)
157 1xj5_A Spermidine synthase 1; 94.2 0.11 3.8E-06 49.2 7.9 62 139-212 104-165 (334)
158 1sui_A Caffeoyl-COA O-methyltr 94.2 0.13 4.4E-06 46.1 7.8 45 162-212 81-125 (247)
159 4df3_A Fibrillarin-like rRNA/T 94.1 0.065 2.2E-06 48.7 5.8 54 153-212 70-123 (233)
160 1g8a_A Fibrillarin-like PRE-rR 94.1 0.059 2E-06 46.6 5.3 47 160-212 73-119 (227)
161 3bgv_A MRNA CAP guanine-N7 met 94.1 0.17 5.8E-06 46.2 8.5 45 160-212 34-78 (313)
162 3mcz_A O-methyltransferase; ad 94.1 0.12 4E-06 47.9 7.6 71 133-211 148-222 (352)
163 2vdw_A Vaccinia virus capping 94.0 0.11 3.8E-06 48.1 7.3 44 160-211 48-91 (302)
164 1xdz_A Methyltransferase GIDB; 93.9 0.084 2.9E-06 46.4 5.9 44 161-211 71-114 (240)
165 3tfw_A Putative O-methyltransf 93.9 0.12 4.2E-06 45.9 7.1 45 162-212 65-109 (248)
166 2pt6_A Spermidine synthase; tr 93.9 0.1 3.6E-06 48.9 6.9 63 139-213 100-162 (321)
167 1i1n_A Protein-L-isoaspartate 93.8 0.18 6.2E-06 43.3 7.9 46 161-212 78-123 (226)
168 3g07_A 7SK snRNA methylphospha 93.8 0.08 2.7E-06 48.3 5.9 46 161-213 47-92 (292)
169 2ar0_A M.ecoki, type I restric 93.8 0.08 2.8E-06 53.4 6.4 74 127-211 147-231 (541)
170 2b3t_A Protein methyltransfera 93.8 0.1 3.5E-06 46.9 6.5 45 161-212 110-154 (276)
171 3ggd_A SAM-dependent methyltra 93.8 0.075 2.6E-06 46.3 5.3 42 161-211 57-98 (245)
172 1ej0_A FTSJ; methyltransferase 93.8 0.16 5.6E-06 40.6 7.0 37 161-204 23-59 (180)
173 1mjf_A Spermidine synthase; sp 93.7 0.067 2.3E-06 49.0 5.1 59 140-211 60-118 (281)
174 1nt2_A Fibrillarin-like PRE-rR 93.7 0.079 2.7E-06 46.3 5.4 38 160-204 57-94 (210)
175 3ckk_A TRNA (guanine-N(7)-)-me 93.7 0.075 2.6E-06 47.4 5.3 43 161-210 47-89 (235)
176 3cbg_A O-methyltransferase; cy 93.7 0.15 5E-06 44.9 7.1 45 162-212 74-118 (232)
177 1dl5_A Protein-L-isoaspartate 93.7 0.17 5.7E-06 46.8 7.8 47 160-212 75-121 (317)
178 4azs_A Methyltransferase WBDD; 93.7 0.26 8.8E-06 49.6 9.8 46 155-211 63-108 (569)
179 2h00_A Methyltransferase 10 do 93.6 0.12 4.3E-06 45.4 6.6 45 161-212 66-110 (254)
180 3lst_A CALO1 methyltransferase 93.6 0.13 4.5E-06 48.0 7.0 65 133-204 153-221 (348)
181 1nv8_A HEMK protein; class I a 93.6 0.23 7.7E-06 45.6 8.5 43 162-212 125-167 (284)
182 1af7_A Chemotaxis receptor met 93.6 0.42 1.4E-05 44.1 10.3 119 81-211 35-157 (274)
183 2vdv_E TRNA (guanine-N(7)-)-me 93.5 0.11 3.8E-06 45.9 6.0 45 160-211 49-93 (246)
184 3dmg_A Probable ribosomal RNA 93.5 0.27 9.1E-06 47.4 9.1 43 161-212 234-276 (381)
185 2cmg_A Spermidine synthase; tr 93.5 0.075 2.6E-06 48.5 4.9 45 159-212 71-115 (262)
186 2plw_A Ribosomal RNA methyltra 93.3 0.19 6.5E-06 42.2 6.9 49 149-202 10-59 (201)
187 3tm4_A TRNA (guanine N2-)-meth 93.3 0.24 8.2E-06 47.1 8.4 44 162-212 219-262 (373)
188 2p8j_A S-adenosylmethionine-de 93.3 0.097 3.3E-06 44.1 5.1 44 161-212 24-67 (209)
189 1yb2_A Hypothetical protein TA 93.2 0.14 4.9E-06 46.0 6.4 50 157-212 107-156 (275)
190 2fpo_A Methylase YHHF; structu 93.2 0.19 6.4E-06 43.2 6.9 43 162-212 56-98 (202)
191 2ipx_A RRNA 2'-O-methyltransfe 93.1 0.12 3.9E-06 45.1 5.4 39 160-204 77-115 (233)
192 2pjd_A Ribosomal RNA small sub 93.0 0.21 7E-06 46.8 7.4 44 162-212 198-241 (343)
193 3bzb_A Uncharacterized protein 93.0 0.12 4.1E-06 47.0 5.6 59 142-211 64-123 (281)
194 2r3s_A Uncharacterized protein 92.9 0.19 6.4E-06 45.9 6.8 45 159-211 164-208 (335)
195 2nxc_A L11 mtase, ribosomal pr 92.9 0.32 1.1E-05 43.4 8.2 42 162-212 122-163 (254)
196 2ift_A Putative methylase HI07 92.9 0.089 3E-06 45.2 4.3 43 162-212 55-97 (201)
197 2ip2_A Probable phenazine-spec 92.8 0.21 7.1E-06 45.9 7.0 70 134-212 139-211 (334)
198 2y1w_A Histone-arginine methyl 92.8 0.18 6.2E-06 47.4 6.7 43 161-212 51-93 (348)
199 3g89_A Ribosomal RNA small sub 92.6 0.29 9.9E-06 43.9 7.5 46 160-212 80-125 (249)
200 2bm8_A Cephalosporin hydroxyla 92.5 0.29 9.9E-06 43.4 7.2 41 162-205 83-123 (236)
201 3lpm_A Putative methyltransfer 92.5 0.13 4.4E-06 45.8 4.9 44 161-212 50-93 (259)
202 2a14_A Indolethylamine N-methy 92.4 0.084 2.9E-06 47.2 3.7 60 145-212 37-99 (263)
203 3fpf_A Mtnas, putative unchara 92.4 0.35 1.2E-05 45.6 8.1 52 154-212 116-167 (298)
204 1fp1_D Isoliquiritigenin 2'-O- 92.4 0.27 9.1E-06 46.3 7.3 64 133-204 177-245 (372)
205 3reo_A (ISO)eugenol O-methyltr 92.3 0.22 7.4E-06 47.2 6.5 64 133-204 171-239 (368)
206 3id6_C Fibrillarin-like rRNA/T 92.3 0.16 5.6E-06 45.8 5.5 41 158-204 74-114 (232)
207 2i62_A Nicotinamide N-methyltr 92.2 0.13 4.3E-06 45.0 4.4 48 157-212 53-100 (265)
208 3ufb_A Type I restriction-modi 92.2 0.25 8.7E-06 49.7 7.2 74 126-210 194-273 (530)
209 1fp2_A Isoflavone O-methyltran 92.1 0.12 4E-06 48.3 4.3 64 133-204 156-224 (352)
210 2fyt_A Protein arginine N-meth 92.0 0.26 9E-06 46.2 6.7 44 160-212 64-107 (340)
211 3s1s_A Restriction endonucleas 92.0 0.71 2.4E-05 49.5 10.6 72 127-207 293-364 (878)
212 3p2e_A 16S rRNA methylase; met 92.0 0.12 4.1E-06 45.7 4.1 37 162-205 26-63 (225)
213 1yub_A Ermam, rRNA methyltrans 91.9 0.074 2.5E-06 47.3 2.7 57 130-206 10-66 (245)
214 3r3h_A O-methyltransferase, SA 91.9 0.11 3.8E-06 46.3 3.9 44 162-211 62-105 (242)
215 3kr9_A SAM-dependent methyltra 91.9 0.61 2.1E-05 42.0 8.7 45 162-213 17-61 (225)
216 4hg2_A Methyltransferase type 91.9 0.097 3.3E-06 47.6 3.4 36 161-205 40-75 (257)
217 3opn_A Putative hemolysin; str 91.5 0.24 8.1E-06 44.2 5.5 39 160-206 37-75 (232)
218 3lec_A NADB-rossmann superfami 91.1 0.82 2.8E-05 41.4 8.7 46 161-213 22-67 (230)
219 2nyu_A Putative ribosomal RNA 91.1 0.52 1.8E-05 39.2 7.0 42 161-202 23-66 (196)
220 3p9c_A Caffeic acid O-methyltr 91.0 0.47 1.6E-05 44.8 7.4 62 134-203 170-236 (364)
221 3gnl_A Uncharacterized protein 90.8 0.79 2.7E-05 41.9 8.4 46 161-213 22-67 (244)
222 3r0q_C Probable protein argini 90.7 0.41 1.4E-05 45.6 6.6 45 159-212 62-106 (376)
223 2qfm_A Spermine synthase; sper 90.7 0.26 9E-06 47.8 5.3 46 159-212 187-232 (364)
224 3frh_A 16S rRNA methylase; met 90.7 0.44 1.5E-05 44.2 6.5 44 159-212 104-147 (253)
225 3tma_A Methyltransferase; thum 90.6 0.55 1.9E-05 43.9 7.4 50 157-212 200-249 (354)
226 1zg3_A Isoflavanone 4'-O-methy 90.4 0.31 1.1E-05 45.5 5.4 63 133-203 159-228 (358)
227 3ldu_A Putative methylase; str 90.4 0.93 3.2E-05 43.5 8.9 67 143-212 181-278 (385)
228 3dp7_A SAM-dependent methyltra 90.3 0.43 1.5E-05 44.9 6.3 44 161-212 180-223 (363)
229 3ajd_A Putative methyltransfer 90.1 1 3.4E-05 40.6 8.4 68 128-212 62-129 (274)
230 1g6q_1 HnRNP arginine N-methyl 90.1 0.36 1.2E-05 44.9 5.5 42 162-212 40-81 (328)
231 3k0b_A Predicted N6-adenine-sp 90.0 1.9 6.5E-05 41.6 10.8 67 143-212 187-284 (393)
232 3htx_A HEN1; HEN1, small RNA m 90.0 0.77 2.6E-05 49.5 8.5 87 162-265 723-812 (950)
233 4hc4_A Protein arginine N-meth 89.9 0.9 3.1E-05 43.9 8.4 41 163-212 86-126 (376)
234 3q7e_A Protein arginine N-meth 89.6 0.42 1.5E-05 44.9 5.7 41 162-211 68-108 (349)
235 2qe6_A Uncharacterized protein 89.5 0.96 3.3E-05 41.1 7.8 44 162-212 79-125 (274)
236 2k4m_A TR8_protein, UPF0146 pr 89.2 0.81 2.8E-05 39.4 6.5 57 135-205 16-73 (153)
237 3ua3_A Protein arginine N-meth 89.0 0.92 3.2E-05 47.8 8.1 63 139-203 390-458 (745)
238 2g72_A Phenylethanolamine N-me 88.9 0.48 1.6E-05 42.5 5.3 45 160-212 71-115 (289)
239 3ldg_A Putative uncharacterize 88.9 2.3 7.7E-05 41.0 10.3 67 143-212 180-277 (384)
240 1vlm_A SAM-dependent methyltra 88.9 0.34 1.1E-05 41.6 4.1 37 161-210 48-84 (219)
241 1m6y_A S-adenosyl-methyltransf 88.3 1 3.4E-05 42.1 7.2 45 162-213 28-72 (301)
242 3b3j_A Histone-arginine methyl 88.3 0.62 2.1E-05 46.2 6.1 42 161-211 159-200 (480)
243 3a27_A TYW2, uncharacterized p 88.0 0.49 1.7E-05 42.8 4.7 45 161-212 120-164 (272)
244 2igt_A SAM dependent methyltra 87.9 1.4 4.9E-05 41.3 8.0 42 162-212 155-196 (332)
245 2frn_A Hypothetical protein PH 87.7 0.45 1.5E-05 43.2 4.3 43 162-212 127-169 (278)
246 1uwv_A 23S rRNA (uracil-5-)-me 87.7 1.1 3.8E-05 43.4 7.3 59 142-212 271-329 (433)
247 2zig_A TTHA0409, putative modi 87.6 0.71 2.4E-05 42.4 5.6 58 143-213 222-279 (297)
248 2zfu_A Nucleomethylin, cerebra 87.5 0.54 1.8E-05 39.9 4.5 31 160-202 67-97 (215)
249 3dou_A Ribosomal RNA large sub 87.1 0.78 2.7E-05 39.3 5.3 44 150-202 14-58 (191)
250 4a6d_A Hydroxyindole O-methylt 86.3 4.7 0.00016 37.7 10.6 71 134-212 149-223 (353)
251 2qy6_A UPF0209 protein YFCK; s 86.2 1.1 3.9E-05 40.7 6.1 42 160-201 60-106 (257)
252 3lcv_B Sisomicin-gentamicin re 85.0 0.64 2.2E-05 43.7 3.8 48 159-213 131-178 (281)
253 2jjq_A Uncharacterized RNA met 85.0 1.5 5E-05 42.8 6.6 42 162-212 292-333 (425)
254 3hp7_A Hemolysin, putative; st 84.7 1.4 4.9E-05 41.1 6.1 46 153-206 77-123 (291)
255 3v97_A Ribosomal RNA large sub 84.5 5 0.00017 41.7 10.7 67 143-212 176-277 (703)
256 1ixk_A Methyltransferase; open 84.1 2.1 7E-05 39.6 6.9 46 161-212 119-164 (315)
257 3bt7_A TRNA (uracil-5-)-methyl 82.7 2 6.7E-05 40.6 6.3 42 162-212 215-256 (369)
258 3o4f_A Spermidine synthase; am 81.2 3.5 0.00012 38.6 7.3 73 128-212 56-128 (294)
259 1wxx_A TT1595, hypothetical pr 81.2 2 6.8E-05 40.7 5.7 43 161-212 210-252 (382)
260 1sqg_A SUN protein, FMU protei 80.6 3.4 0.00012 39.8 7.2 67 128-212 225-291 (429)
261 2b78_A Hypothetical protein SM 79.9 1.8 6.1E-05 41.3 4.9 43 162-212 214-256 (385)
262 2dul_A N(2),N(2)-dimethylguano 79.1 5.2 0.00018 38.3 7.9 45 162-213 49-93 (378)
263 2oyr_A UPF0341 protein YHIQ; a 78.7 3 0.0001 38.1 5.8 41 162-211 90-130 (258)
264 3axs_A Probable N(2),N(2)-dime 77.5 8.4 0.00029 37.3 8.9 77 126-212 22-98 (392)
265 2qm3_A Predicted methyltransfe 77.3 6.4 0.00022 37.0 7.9 44 161-212 173-216 (373)
266 3m6w_A RRNA methylase; rRNA me 77.2 9.2 0.00032 37.9 9.3 46 161-212 102-147 (464)
267 3m4x_A NOL1/NOP2/SUN family pr 76.9 8.5 0.00029 38.0 8.9 46 161-212 106-151 (456)
268 1g60_A Adenine-specific methyl 76.1 3.6 0.00012 36.8 5.5 56 144-212 200-255 (260)
269 3c0k_A UPF0064 protein YCCW; P 76.0 2.5 8.6E-05 40.1 4.7 43 162-212 222-264 (396)
270 2as0_A Hypothetical protein PH 75.9 2.9 9.8E-05 39.7 5.1 43 162-212 219-261 (396)
271 2oxt_A Nucleoside-2'-O-methylt 75.2 2.7 9.2E-05 38.2 4.5 32 161-202 75-106 (265)
272 2r6z_A UPF0341 protein in RSP 74.7 2.2 7.6E-05 38.6 3.7 33 162-203 85-117 (258)
273 2yx1_A Hypothetical protein MJ 73.8 2.5 8.5E-05 39.4 3.9 41 162-212 197-237 (336)
274 2yxl_A PH0851 protein, 450AA l 72.7 6.4 0.00022 38.2 6.7 45 162-212 261-305 (450)
275 2wa2_A Non-structural protein 72.0 3.2 0.00011 38.0 4.1 32 161-202 83-114 (276)
276 3k6r_A Putative transferase PH 69.1 4.1 0.00014 37.6 4.2 43 162-212 127-169 (278)
277 3ll7_A Putative methyltransfer 69.0 3.4 0.00011 40.5 3.8 68 131-212 68-136 (410)
278 3giw_A Protein of unknown func 68.4 11 0.00037 35.0 7.0 46 162-213 80-127 (277)
279 3pvc_A TRNA 5-methylaminomethy 67.1 9.4 0.00032 38.9 6.8 53 152-205 51-108 (689)
280 3sso_A Methyltransferase; macr 65.5 8.5 0.00029 38.0 5.8 38 160-203 216-259 (419)
281 3v97_A Ribosomal RNA large sub 64.6 13 0.00044 38.6 7.3 43 162-212 541-583 (703)
282 3c6k_A Spermine synthase; sper 64.2 8.6 0.00029 37.4 5.5 60 140-213 191-250 (381)
283 4dmg_A Putative uncharacterize 63.9 7 0.00024 37.6 4.9 42 162-212 216-257 (393)
284 2frx_A Hypothetical protein YE 62.9 8.5 0.00029 38.0 5.4 45 162-212 119-163 (479)
285 2b9e_A NOL1/NOP2/SUN domain fa 62.6 16 0.00056 33.8 7.0 45 162-212 104-148 (309)
286 3ps9_A TRNA 5-methylaminomethy 57.9 12 0.00042 37.8 5.7 45 160-204 66-115 (676)
287 2p41_A Type II methyltransfera 51.0 14 0.00047 34.2 4.3 28 162-199 84-111 (305)
288 3vyw_A MNMC2; tRNA wobble urid 50.2 24 0.00084 33.2 6.0 70 129-201 64-136 (308)
289 3cvo_A Methyltransferase-like 48.6 43 0.0015 29.4 7.0 42 162-213 32-73 (202)
290 3b5i_A S-adenosyl-L-methionine 46.6 13 0.00045 35.7 3.6 23 159-181 51-73 (374)
291 2py6_A Methyltransferase FKBM; 46.0 37 0.0013 32.5 6.7 48 160-212 226-273 (409)
292 2vz8_A Fatty acid synthase; tr 42.1 5.1 0.00017 47.5 -0.2 50 160-211 1240-1289(2512)
293 2ba3_A NIKA; dimer, bacterial 39.5 28 0.00095 23.4 3.4 29 83-113 23-51 (51)
294 1boo_A Protein (N-4 cytosine-s 34.9 49 0.0017 30.5 5.4 43 162-213 254-296 (323)
295 2efj_A 3,7-dimethylxanthine me 34.5 50 0.0017 31.8 5.5 40 161-200 53-102 (384)
296 3mag_A VP39; methylated adenin 34.1 67 0.0023 30.4 6.1 55 146-203 46-100 (307)
297 1wg8_A Predicted S-adenosylmet 31.0 1E+02 0.0036 28.6 6.9 41 162-212 24-64 (285)
298 1eg2_A Modification methylase 30.9 80 0.0028 29.2 6.2 58 143-213 229-289 (319)
299 3l6b_A Serine racemase; pyrido 27.5 1.9E+02 0.0064 26.8 8.1 46 150-202 168-214 (346)
300 2k9i_A Plasmid PRN1, complete 25.8 64 0.0022 21.3 3.4 29 83-113 17-45 (55)
301 2xyq_A Putative 2'-O-methyl tr 23.1 96 0.0033 28.5 5.1 38 157-202 60-103 (290)
302 2btq_B Tubulin btubb; structur 22.0 82 0.0028 30.6 4.6 72 110-187 84-162 (426)
303 3iau_A Threonine deaminase; py 20.3 3.3E+02 0.011 25.2 8.3 47 149-202 199-246 (366)
No 1
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=100.00 E-value=6.8e-60 Score=463.22 Aligned_cols=197 Identities=40% Similarity=0.789 Sum_probs=177.4
Q ss_pred chHHHHHHHHHHHHhcCCcccHHHHHHHhhcCCCCcccCCCCCCCCCCCeecCCChhHHHHHHHHHHHHHHHHHcCCCCc
Q 020840 82 LESELVKHLKGIIKFRGGPISVAEYMEEVLTNPKAGFYINRDVFGAEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNR 161 (320)
Q Consensus 82 ~~~~L~~~i~~~I~~~~GpIsf~dfM~~aLY~P~~GYY~~~~~~G~~GDFiTSpEIsp~FGe~IA~~i~~~w~~~g~p~~ 161 (320)
+++.|.++|+++|+.+ |||||++||++|||||++|||+++++||+.|||||||||||+|||+||+|++++|+.+|.|.+
T Consensus 3 ~~~~L~~~i~~~I~~~-G~i~f~~fM~~aLy~P~~GYY~~~~~~G~~GDF~Tapeis~~FGe~la~~~~~~w~~~g~p~~ 81 (387)
T 1zkd_A 3 DQTALATEIKRLIKAA-GPMPVWRYMELCLGHPEHGYYVTRDPLGREGDFTTSPEISQMFGELLGLWSASVWKAADEPQT 81 (387)
T ss_dssp CSSHHHHHHHHHHHHH-CSEEHHHHHHHHHHCTTTCTTTCC--------CCSHHHHCHHHHHHHHHHHHHHHHHTTCCSS
T ss_pred chHHHHHHHHHHHHhc-CCeeHHHHHHHHhcCCCCcccCCCCCCCCCCCeeCCCchHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 3567999999999986 899999999999999999999998899999999999999999999999999999999999999
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccccccCCcCcccchhhhcccCCCCeEeecc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKCMDENNANDNVEERTISSLAGTPVSWHAA 241 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~~~~~~~~~~~~~~~~~~~~~~~i~W~~s 241 (320)
++|||+|||+|+||.|||++++..|+++.+++|+|||+||.|+++|+++|+.. .+|.|+++
T Consensus 82 ~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~-------------------~~v~W~~~ 142 (387)
T 1zkd_A 82 LRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGI-------------------RNIHWHDS 142 (387)
T ss_dssp EEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTC-------------------SSEEEESS
T ss_pred cEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCC-------------------CCeEEeCC
Confidence 99999999999999999999998899999999999999999999999999741 16999999
Q ss_pred cccCCCCCCEEEEEecccccccceeEEEeCCeeEEEEEEEcCCCceEEEeecCCCccc
Q 020840 242 LEQVPSGFPTIIVAHEFYDALPVHQFQKTTRGWCEKLVDIAEDSSLHQQLSFCCSAAS 299 (320)
Q Consensus 242 leelp~~~~~~iiANE~fDALPv~~f~~~~~~w~E~~V~v~~~g~f~~v~~p~~~~~~ 299 (320)
++++|.+ +|||||||||||||||+|++++++|+|++|+++++|+|.|+..|.+++..
T Consensus 143 l~~lp~~-~~~viANE~fDAlPv~~~~~~~~~w~E~~V~~~~~g~~~~~~~~~~~~~~ 199 (387)
T 1zkd_A 143 FEDVPEG-PAVILANEYFDVLPIHQAIKRETGWHERVIEIGASGELVFGVAADPIPGF 199 (387)
T ss_dssp GGGSCCS-SEEEEEESSGGGSCCEEEEEETTEEEEEEEEECTTSCEEEEECSSCCTTC
T ss_pred hhhcCCC-CeEEEeccccccCceEEEEecCCeEEEEEEEECCCCcEEEecCCCCchhh
Confidence 9999987 99999999999999999999999999999999888889999998777643
No 2
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=100.00 E-value=1.8e-55 Score=436.69 Aligned_cols=194 Identities=29% Similarity=0.476 Sum_probs=164.1
Q ss_pred chHHHHHHHHHHHHhcCCcccHHHHHHHhhcCCCCcccCCC-CCCC----CCCCeecCCChhHHHHHHHHHHHHHHHHHc
Q 020840 82 LESELVKHLKGIIKFRGGPISVAEYMEEVLTNPKAGFYINR-DVFG----AEGDFITSPEVSQMFGEMVGVWAMCLWEQM 156 (320)
Q Consensus 82 ~~~~L~~~i~~~I~~~~GpIsf~dfM~~aLY~P~~GYY~~~-~~~G----~~GDFiTSpEIsp~FGe~IA~~i~~~w~~~ 156 (320)
.++.|.++|+++|++.+|||||++||++|||||++|||+++ ++|| ++|||||||||||+|||+||+|+.++|+++
T Consensus 57 ~s~~L~~~i~~~I~~~~GpI~fa~yM~~aLy~P~~GYY~~~~~~~G~~~~~~GDFiTAPeiS~~FGe~la~~~~~~~~~~ 136 (432)
T 4f3n_A 57 QSEALAASLRAEIASAGGWIPFSRYMERVLYAPGMGYYSGGAQKFGRRADDGSDFVTAPELSPLFAQTLARPVAQALDAS 136 (432)
T ss_dssp HHHHHHHHHHHHHHHTTSCEEHHHHHHHHHHSTTTSSSCC-------------CCSSCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCeeHHHHHHHHhcCCCCCcccCCCCCCCCCCCCCCCccCchhhhHHHHHHHHHHHHHHHHhc
Confidence 36889999999998766999999999999999999999986 6899 999999999999999999999999999999
Q ss_pred CCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccccccCCcCcccchhhhcccCCCCe
Q 020840 157 GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKCMDENNANDNVEERTISSLAGTPV 236 (320)
Q Consensus 157 g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~~~~~~~~~~~~~~~~~~~~~~~i 236 (320)
| +++|||+|||+|+||.|||++++++... ..+|+|||+||.|+++|+++|+...+. .+.+|
T Consensus 137 g---~~~ivE~GaG~GtLa~DiL~~l~~~~~~--~~~y~iVE~Sp~Lr~~Q~~~L~~~~~~--------------~~~~v 197 (432)
T 4f3n_A 137 G---TRRVMEFGAGTGKLAAGLLTALAALGVE--LDEYAIVDLSGELRARQRETLGAQAPG--------------LAARV 197 (432)
T ss_dssp T---CCEEEEESCTTSHHHHHHHHHHHHTTCC--CSEEEEECTTSSSHHHHHHHHHHHSTT--------------TGGGE
T ss_pred C---CCeEEEeCCCccHHHHHHHHHHHhcCCC--CceEEEEEcCHHHHHHHHHHHhccccc--------------cCCCc
Confidence 8 4799999999999999999999865322 348999999999999999999753221 23479
Q ss_pred EeecccccCCCCCCEEEEEecccccccceeEEEeCCeeEEEEEEEcCCCceEEEeecCCCc
Q 020840 237 SWHAALEQVPSGFPTIIVAHEFYDALPVHQFQKTTRGWCEKLVDIAEDSSLHQQLSFCCSA 297 (320)
Q Consensus 237 ~W~~sleelp~~~~~~iiANE~fDALPv~~f~~~~~~w~E~~V~v~~~g~f~~v~~p~~~~ 297 (320)
.|+++ +|++.+|||||||||||||||+|++++++|+|++|.++++|+|.|...|.+++
T Consensus 198 ~W~~~---lP~~~~g~iiANE~fDAlPv~~~~~~~~~w~E~~V~~~~~~~~~~~~~p~~~~ 255 (432)
T 4f3n_A 198 RWLDA---LPERFEGVVVGNEVLDAMPVRLVAKQARGWCERGVSIDDAGAFVFADRPFARA 255 (432)
T ss_dssp EEESS---CCSCEEEEEEEESCGGGSCCEEEEEETTEEEEEEEEECTTSCEEEEEECCSST
T ss_pred eeccc---CCccCceEEEeehhhccCceeEEEEeCCcEEEEEEEEcCCCcEEeccCCCCcH
Confidence 99864 67666899999999999999999999999999999998888898887776444
No 3
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=97.76 E-value=0.00016 Score=66.22 Aligned_cols=117 Identities=19% Similarity=0.264 Sum_probs=69.8
Q ss_pred CCCCCeecCCChhHHHHHHHHHH----------HHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEE
Q 020840 126 GAEGDFITSPEVSQMFGEMVGVW----------AMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIH 195 (320)
Q Consensus 126 G~~GDFiTSpEIsp~FGe~IA~~----------i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~ 195 (320)
++.+||.=--++..+|-.+|-+- +..+.+..-.| .-+|+|+|||+|.++..+++.+.. ...+++
T Consensus 27 ~~~~~f~F~~~va~~fdd~i~rsvP~Y~~~~~~i~~l~~~~~~~-~~~vLDlGcGtG~~~~~la~~~~~-----~~~~v~ 100 (261)
T 4gek_A 27 ARLGDWTFDERVAEVFPDMIQRSVPGYSNIISMIGMLAERFVQP-GTQVYDLGCSLGAATLSVRRNIHH-----DNCKII 100 (261)
T ss_dssp -----CCCCHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHCCT-TCEEEEETCTTTHHHHHHHHTCCS-----SSCEEE
T ss_pred ccCCCceeCcchhhhhhhhHhhcCCCHHHHHHHHHHHHHHhCCC-CCEEEEEeCCCCHHHHHHHHhcCC-----CCCEEE
Confidence 44566643445566666665441 12222222333 358999999999998887764321 235799
Q ss_pred EEecChhhHHHHHHhccccccCCcCcccchhhhcccCCCCeEee-cccccCCCCCCEEEEEecccccccc
Q 020840 196 LVECSPTLQKLQHHNLKCMDENNANDNVEERTISSLAGTPVSWH-AALEQVPSGFPTIIVAHEFYDALPV 264 (320)
Q Consensus 196 iVE~Sp~Lr~~Q~e~L~~~~~~~~~~~~~~~~~~~~~~~~i~W~-~sleelp~~~~~~iiANE~fDALPv 264 (320)
-||+|+.+.+.-++++.... ...+|.+. .++.++|.+..-+|+++..|--+|.
T Consensus 101 gvD~s~~ml~~A~~~~~~~~----------------~~~~v~~~~~D~~~~~~~~~d~v~~~~~l~~~~~ 154 (261)
T 4gek_A 101 AIDNSPAMIERCRRHIDAYK----------------APTPVDVIEGDIRDIAIENASMVVLNFTLQFLEP 154 (261)
T ss_dssp EEESCHHHHHHHHHHHHTSC----------------CSSCEEEEESCTTTCCCCSEEEEEEESCGGGSCH
T ss_pred EEECCHHHHHHHHHHHHhhc----------------cCceEEEeecccccccccccccceeeeeeeecCc
Confidence 99999999888777775421 11245554 2345555443468889888877764
No 4
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=96.89 E-value=0.0092 Score=53.56 Aligned_cols=91 Identities=13% Similarity=0.094 Sum_probs=58.5
Q ss_pred HHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccccccCCcCcccchhh
Q 020840 148 WAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKCMDENNANDNVEERT 227 (320)
Q Consensus 148 ~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~~~~~~~~~~~~~~~ 227 (320)
.+..+.+.++.+...+|+|+|||.|.++..+++.. + .+++.||+|+.+.+.-++++.....
T Consensus 52 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~-----~~v~gvd~s~~~~~~a~~~~~~~~~----------- 112 (287)
T 1kpg_A 52 KIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKY---D-----VNVVGLTLSKNQANHVQQLVANSEN----------- 112 (287)
T ss_dssp HHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHH---C-----CEEEEEESCHHHHHHHHHHHHTCCC-----------
T ss_pred HHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHc---C-----CEEEEEECCHHHHHHHHHHHHhcCC-----------
Confidence 33334444555555699999999999999887543 1 2799999999998877776643110
Q ss_pred hcccCCCCeEe-ecccccCCCCCCEEEEEeccccccc
Q 020840 228 ISSLAGTPVSW-HAALEQVPSGFPTIIVAHEFYDALP 263 (320)
Q Consensus 228 ~~~~~~~~i~W-~~sleelp~~~~~~iiANE~fDALP 263 (320)
...+.+ ..++.+++.. .-+|+++++|..+|
T Consensus 113 -----~~~~~~~~~d~~~~~~~-fD~v~~~~~l~~~~ 143 (287)
T 1kpg_A 113 -----LRSKRVLLAGWEQFDEP-VDRIVSIGAFEHFG 143 (287)
T ss_dssp -----CSCEEEEESCGGGCCCC-CSEEEEESCGGGTC
T ss_pred -----CCCeEEEECChhhCCCC-eeEEEEeCchhhcC
Confidence 012332 1233445532 45788888888885
No 5
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=96.88 E-value=0.0045 Score=57.38 Aligned_cols=66 Identities=24% Similarity=0.382 Sum_probs=47.0
Q ss_pred CCCCCCCeecCCChhHHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhh
Q 020840 124 VFGAEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTL 203 (320)
Q Consensus 124 ~~G~~GDFiTSpEIsp~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~L 203 (320)
.+| -.|++.+.+-. .++ +..+.... +|+|+|||+|.|+..+++.. .+++.||+++.+
T Consensus 24 ~~G--QnfL~d~~i~~--------~Iv---~~~~~~~~-~VLEIG~G~G~lt~~L~~~~---------~~V~avEid~~~ 80 (271)
T 3fut_A 24 RFG--QNFLVSEAHLR--------RIV---EAARPFTG-PVFEVGPGLGALTRALLEAG---------AEVTAIEKDLRL 80 (271)
T ss_dssp TSS--CCEECCHHHHH--------HHH---HHHCCCCS-CEEEECCTTSHHHHHHHHTT---------CCEEEEESCGGG
T ss_pred cCC--ccccCCHHHHH--------HHH---HhcCCCCC-eEEEEeCchHHHHHHHHHcC---------CEEEEEECCHHH
Confidence 355 47888766532 222 22344445 89999999999999887642 258999999999
Q ss_pred HHHHHHhcc
Q 020840 204 QKLQHHNLK 212 (320)
Q Consensus 204 r~~Q~e~L~ 212 (320)
.+.-++++.
T Consensus 81 ~~~l~~~~~ 89 (271)
T 3fut_A 81 RPVLEETLS 89 (271)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHhcC
Confidence 988777664
No 6
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=96.85 E-value=0.011 Score=53.78 Aligned_cols=97 Identities=11% Similarity=0.082 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccccccCCcCcc
Q 020840 143 EMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKCMDENNANDN 222 (320)
Q Consensus 143 e~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~~~~~~~~~~ 222 (320)
+.-.+.+..+.+.++.....+|+|+|||+|.++..+++.. + .+++.||+|+.+.+.-++++....
T Consensus 55 ~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~---~-----~~v~gvD~s~~~~~~a~~~~~~~~------- 119 (302)
T 3hem_A 55 EAQYAKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEY---D-----VNVIGLTLSENQYAHDKAMFDEVD------- 119 (302)
T ss_dssp HHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH---C-----CEEEEEECCHHHHHHHHHHHHHSC-------
T ss_pred HHHHHHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhC---C-----CEEEEEECCHHHHHHHHHHHHhcC-------
Confidence 3333444445555555555699999999999998887653 1 369999999999887777664310
Q ss_pred cchhhhcccCCCCeEee-cccccCCCCCCEEEEEecccccccc
Q 020840 223 VEERTISSLAGTPVSWH-AALEQVPSGFPTIIVAHEFYDALPV 264 (320)
Q Consensus 223 ~~~~~~~~~~~~~i~W~-~sleelp~~~~~~iiANE~fDALPv 264 (320)
....+.+. .++.+++ +..-+|+++++|..+|-
T Consensus 120 ---------~~~~v~~~~~d~~~~~-~~fD~v~~~~~~~~~~d 152 (302)
T 3hem_A 120 ---------SPRRKEVRIQGWEEFD-EPVDRIVSLGAFEHFAD 152 (302)
T ss_dssp ---------CSSCEEEEECCGGGCC-CCCSEEEEESCGGGTTC
T ss_pred ---------CCCceEEEECCHHHcC-CCccEEEEcchHHhcCc
Confidence 01123332 2233442 22458889999988853
No 7
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=96.83 E-value=0.013 Score=52.04 Aligned_cols=90 Identities=12% Similarity=0.132 Sum_probs=57.0
Q ss_pred HHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccccccCCcCcccchhhhc
Q 020840 150 MCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKCMDENNANDNVEERTIS 229 (320)
Q Consensus 150 ~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~~~~~~~~~~~~~~~~~ 229 (320)
..+.+.++.....+|+|+|||.|.++..+.+.. ..+++.||+|+.+.+.-++++....
T Consensus 51 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--------~~~v~gvD~s~~~~~~a~~~~~~~~-------------- 108 (273)
T 3bus_A 51 DEMIALLDVRSGDRVLDVGCGIGKPAVRLATAR--------DVRVTGISISRPQVNQANARATAAG-------------- 108 (273)
T ss_dssp HHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHS--------CCEEEEEESCHHHHHHHHHHHHHTT--------------
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc--------CCEEEEEeCCHHHHHHHHHHHHhcC--------------
Confidence 334445555455699999999999998877642 2479999999998877666554210
Q ss_pred ccCCCCeEee-cccccCC--CCCCEEEEEeccccccc
Q 020840 230 SLAGTPVSWH-AALEQVP--SGFPTIIVAHEFYDALP 263 (320)
Q Consensus 230 ~~~~~~i~W~-~sleelp--~~~~~~iiANE~fDALP 263 (320)
...++.+. .++.+++ .+..-+|+++++|..+|
T Consensus 109 --~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 143 (273)
T 3bus_A 109 --LANRVTFSYADAMDLPFEDASFDAVWALESLHHMP 143 (273)
T ss_dssp --CTTTEEEEECCTTSCCSCTTCEEEEEEESCTTTSS
T ss_pred --CCcceEEEECccccCCCCCCCccEEEEechhhhCC
Confidence 00123332 1223333 22246888998888876
No 8
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=96.77 E-value=0.0026 Score=57.95 Aligned_cols=73 Identities=14% Similarity=0.244 Sum_probs=48.8
Q ss_pred hHHHHHHHHHHHHHHHHHcCC-CCcceEEEecCCchhHHHHHHHHHh-cCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 138 SQMFGEMVGVWAMCLWEQMGQ-PNRVNLVELGPGRGTLMADLLRGAS-KFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 138 sp~FGe~IA~~i~~~w~~~g~-p~~l~IvEiGaG~GtLa~DIL~~l~-~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
++.+-+.+...+-.+....+. ....+|+|+|||+|.++..+|..+. ..|.. .+.|+.||+|+.+.+.-++++.
T Consensus 29 ~~~~~~~~~~~l~~~l~~~~~~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~--~v~~~~vD~S~~ml~~a~~~~~ 103 (292)
T 2aot_A 29 HQCMQEFMDKKLPGIIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQAQYPGV--CINNEVVEPSAEQIAKYKELVA 103 (292)
T ss_dssp HHHHHHHHHHTHHHHSSSTTTTCSEEEEEEETCTTSHHHHHHHHHHHHHSTTC--EEEEEEECSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhchhHHhhccCCCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCc--eeeEEEEeCCHHHHHHHHHHHH
Confidence 444444444444434333442 3457999999999999999988874 34442 2357999999999887777654
No 9
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=96.70 E-value=0.02 Score=51.60 Aligned_cols=48 Identities=19% Similarity=0.225 Sum_probs=37.4
Q ss_pred CCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 157 GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 157 g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
+.+...+|+|+|||.|.++..+++.. ..+++.||+|+.+.+.-++++.
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~--------~~~v~gvD~s~~~~~~a~~~~~ 126 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKF--------GVSIDCLNIAPVQNKRNEEYNN 126 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHH--------CCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHh--------CCEEEEEeCCHHHHHHHHHHHH
Confidence 43445699999999999999887754 1279999999998877666553
No 10
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=96.68 E-value=0.016 Score=52.10 Aligned_cols=64 Identities=13% Similarity=0.199 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 139 QMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 139 p~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.+--..+...+..+...+..+ +.+|+|+|||+|.++..+.+. ..+++.||+|+.+.+.-++++.
T Consensus 48 ~~~~~~~~~~l~~~l~~~~~~-~~~vLDiGcG~G~~~~~l~~~---------~~~v~gvD~s~~~~~~a~~~~~ 111 (285)
T 4htf_A 48 QLRQAILWQDLDRVLAEMGPQ-KLRVLDAGGGEGQTAIKMAER---------GHQVILCDLSAQMIDRAKQAAE 111 (285)
T ss_dssp HHHHHHHHHHHHHHHHHTCSS-CCEEEEETCTTCHHHHHHHHT---------TCEEEEEESCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhcCCC-CCEEEEeCCcchHHHHHHHHC---------CCEEEEEECCHHHHHHHHHHHH
Confidence 344444445555555555543 469999999999998877653 2379999999999887776664
No 11
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=96.67 E-value=0.0043 Score=59.08 Aligned_cols=68 Identities=13% Similarity=0.191 Sum_probs=51.6
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 138 SQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 138 sp~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
--.|-++|+..+...+.....|++.+|++||||.|.++..+++. +|. .+++.||++|.+.+.-++.+.
T Consensus 67 e~~Y~e~m~~~~~~l~~~~p~p~~~rVLdIG~G~G~la~~la~~---~p~----~~v~~VEidp~vi~~Ar~~~~ 134 (317)
T 3gjy_A 67 EFEYMRWIATGARAFIDAHQDASKLRITHLGGGACTMARYFADV---YPQ----SRNTVVELDAELARLSREWFD 134 (317)
T ss_dssp CSHHHHHHHHHHHHHHHHHSCGGGCEEEEESCGGGHHHHHHHHH---STT----CEEEEEESCHHHHHHHHHHSC
T ss_pred hhHHHHHHHHHHHhhcccCCCCCCCEEEEEECCcCHHHHHHHHH---CCC----cEEEEEECCHHHHHHHHHhcc
Confidence 34677888887765433334455679999999999999888765 233 378999999999998888775
No 12
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=96.63 E-value=0.0082 Score=56.32 Aligned_cols=77 Identities=10% Similarity=0.133 Sum_probs=54.0
Q ss_pred CCCCeecCCChhHHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHH
Q 020840 127 AEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKL 206 (320)
Q Consensus 127 ~~GDFiTSpEIsp~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~ 206 (320)
..|.|+|+.++..+..+++.. + . ......+|+|+|||+|.++..+++.+..... ...+++-+|+++...+.
T Consensus 104 ~~g~~~TP~~i~~~~~~ll~~-l----~--~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~--~~~~v~GiDi~~~~~~~ 174 (344)
T 2f8l_A 104 QVNHQMTPDSIGFIVAYLLEK-V----I--QKKKNVSILDPACGTANLLTTVINQLELKGD--VDVHASGVDVDDLLISL 174 (344)
T ss_dssp CGGGCCCCHHHHHHHHHHHHH-H----H--TTCSEEEEEETTCTTSHHHHHHHHHHHTTSS--CEEEEEEEESCHHHHHH
T ss_pred ccCcCCChHHHHHHHHHHHHH-h----c--CCCCCCEEEeCCCCccHHHHHHHHHHHHhcC--CCceEEEEECCHHHHHH
Confidence 358899998777665555432 1 1 2224479999999999999999888753200 12579999999999877
Q ss_pred HHHhcc
Q 020840 207 QHHNLK 212 (320)
Q Consensus 207 Q~e~L~ 212 (320)
-+..+.
T Consensus 175 a~~n~~ 180 (344)
T 2f8l_A 175 ALVGAD 180 (344)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666553
No 13
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=96.62 E-value=0.02 Score=52.39 Aligned_cols=91 Identities=14% Similarity=0.145 Sum_probs=58.6
Q ss_pred HHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccccccCCcCcccchhhh
Q 020840 149 AMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKCMDENNANDNVEERTI 228 (320)
Q Consensus 149 i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~~~~~~~~~~~~~~~~ 228 (320)
+..+.+.++.....+|+|+|||.|.++..+++.. ..+++.||+|+.+.+.-++++.....
T Consensus 79 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~--------~~~v~gvD~s~~~~~~a~~~~~~~~~------------ 138 (318)
T 2fk8_A 79 VDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERF--------DVNVIGLTLSKNQHARCEQVLASIDT------------ 138 (318)
T ss_dssp HHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHH--------CCEEEEEESCHHHHHHHHHHHHTSCC------------
T ss_pred HHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHC--------CCEEEEEECCHHHHHHHHHHHHhcCC------------
Confidence 3334444555455699999999999998887654 12799999999998877776643110
Q ss_pred cccCCCCeEee-cccccCCCCCCEEEEEecccccccc
Q 020840 229 SSLAGTPVSWH-AALEQVPSGFPTIIVAHEFYDALPV 264 (320)
Q Consensus 229 ~~~~~~~i~W~-~sleelp~~~~~~iiANE~fDALPv 264 (320)
...+.+. .++.+++.. .-+|+++++|..+|.
T Consensus 139 ----~~~v~~~~~d~~~~~~~-fD~v~~~~~l~~~~~ 170 (318)
T 2fk8_A 139 ----NRSRQVLLQGWEDFAEP-VDRIVSIEAFEHFGH 170 (318)
T ss_dssp ----SSCEEEEESCGGGCCCC-CSEEEEESCGGGTCG
T ss_pred ----CCceEEEECChHHCCCC-cCEEEEeChHHhcCH
Confidence 0123322 223445433 447888888888863
No 14
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=96.51 E-value=0.017 Score=48.69 Aligned_cols=48 Identities=19% Similarity=0.429 Sum_probs=37.1
Q ss_pred cCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 156 MGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 156 ~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
++.+.. +|+|+|||+|.++..+++. + ..+++.||+|+.+.+.-++++.
T Consensus 40 ~~~~~~-~vLdiG~G~G~~~~~l~~~----~----~~~v~~~D~s~~~~~~a~~~~~ 87 (219)
T 3dlc_A 40 FGITAG-TCIDIGSGPGALSIALAKQ----S----DFSIRALDFSKHMNEIALKNIA 87 (219)
T ss_dssp HCCCEE-EEEEETCTTSHHHHHHHHH----S----EEEEEEEESCHHHHHHHHHHHH
T ss_pred cCCCCC-EEEEECCCCCHHHHHHHHc----C----CCeEEEEECCHHHHHHHHHHHH
Confidence 444433 9999999999998887764 2 2479999999999887777664
No 15
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=96.49 E-value=0.0087 Score=56.17 Aligned_cols=63 Identities=17% Similarity=0.266 Sum_probs=45.2
Q ss_pred CeecCCChhHHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHH
Q 020840 130 DFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHH 209 (320)
Q Consensus 130 DFiTSpEIsp~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e 209 (320)
.|.+.+.+- ..+++ .++....-+|+|+|||+|.|+..+++.. .+++-||+++.+.+.-++
T Consensus 31 nfL~d~~i~--------~~Iv~---~l~~~~~~~VLEIG~G~G~lT~~La~~~---------~~V~aVEid~~li~~a~~ 90 (295)
T 3gru_A 31 CFLIDKNFV--------NKAVE---SANLTKDDVVLEIGLGKGILTEELAKNA---------KKVYVIEIDKSLEPYANK 90 (295)
T ss_dssp CEECCHHHH--------HHHHH---HTTCCTTCEEEEECCTTSHHHHHHHHHS---------SEEEEEESCGGGHHHHHH
T ss_pred cccCCHHHH--------HHHHH---hcCCCCcCEEEEECCCchHHHHHHHhcC---------CEEEEEECCHHHHHHHHH
Confidence 588876552 22222 2333334589999999999999888741 268999999999988777
Q ss_pred hcc
Q 020840 210 NLK 212 (320)
Q Consensus 210 ~L~ 212 (320)
++.
T Consensus 91 ~~~ 93 (295)
T 3gru_A 91 LKE 93 (295)
T ss_dssp HHH
T ss_pred Hhc
Confidence 764
No 16
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=96.40 E-value=0.0052 Score=51.85 Aligned_cols=61 Identities=16% Similarity=0.323 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 143 EMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 143 e~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
+.+..++.+..... ....+|+|+|||+|.++..+++.. | ..+++.||+|+.+.+.-++++.
T Consensus 15 ~~~~~~~~~~l~~~--~~~~~vLDiG~G~G~~~~~l~~~~---~----~~~v~~vD~~~~~~~~a~~~~~ 75 (215)
T 4dzr_A 15 EVLVEEAIRFLKRM--PSGTRVIDVGTGSGCIAVSIALAC---P----GVSVTAVDLSMDALAVARRNAE 75 (215)
T ss_dssp HHHHHHHHHHHTTC--CTTEEEEEEESSBCHHHHHHHHHC---T----TEEEEEEECC------------
T ss_pred HHHHHHHHHHhhhc--CCCCEEEEecCCHhHHHHHHHHhC---C----CCeEEEEECCHHHHHHHHHHHH
Confidence 44455555444321 344699999999999998887753 2 3479999999998776655543
No 17
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=96.36 E-value=0.013 Score=50.10 Aligned_cols=42 Identities=26% Similarity=0.381 Sum_probs=34.5
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.+|+|+|||+|.++..+.+. ..+++.||+|+.+.+.-++++.
T Consensus 47 ~~vLDiGcG~G~~~~~l~~~---------~~~v~~vD~s~~~~~~a~~~~~ 88 (220)
T 3hnr_A 47 GNVLEFGVGTGNLTNKLLLA---------GRTVYGIEPSREMRMIAKEKLP 88 (220)
T ss_dssp SEEEEECCTTSHHHHHHHHT---------TCEEEEECSCHHHHHHHHHHSC
T ss_pred CeEEEeCCCCCHHHHHHHhC---------CCeEEEEeCCHHHHHHHHHhCC
Confidence 58999999999998887653 2379999999999887777654
No 18
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=96.34 E-value=0.011 Score=51.48 Aligned_cols=85 Identities=11% Similarity=0.063 Sum_probs=53.4
Q ss_pred HHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccccccCCcCcccchhhhcccC
Q 020840 153 WEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKCMDENNANDNVEERTISSLA 232 (320)
Q Consensus 153 w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~~~~~~~~~~~~~~~~~~~~ 232 (320)
+...+.+. .+|+|+|||+|.++..+.+ ...+++.||+|+.+.+.-++++.....
T Consensus 60 ~~~~~~~~-~~vLDiGcG~G~~~~~l~~---------~~~~v~gvD~s~~~~~~a~~~~~~~~~---------------- 113 (235)
T 3lcc_A 60 VDTSSLPL-GRALVPGCGGGHDVVAMAS---------PERFVVGLDISESALAKANETYGSSPK---------------- 113 (235)
T ss_dssp HHTTCSCC-EEEEEETCTTCHHHHHHCB---------TTEEEEEECSCHHHHHHHHHHHTTSGG----------------
T ss_pred HHhcCCCC-CCEEEeCCCCCHHHHHHHh---------CCCeEEEEECCHHHHHHHHHHhhccCC----------------
Confidence 33344444 4999999999998886532 124799999999998877776643100
Q ss_pred CCCeEee-cccccCC-CCCCEEEEEeccccccc
Q 020840 233 GTPVSWH-AALEQVP-SGFPTIIVAHEFYDALP 263 (320)
Q Consensus 233 ~~~i~W~-~sleelp-~~~~~~iiANE~fDALP 263 (320)
..++.+. .++.+++ .+..-+|+++.+|..+|
T Consensus 114 ~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~~ 146 (235)
T 3lcc_A 114 AEYFSFVKEDVFTWRPTELFDLIFDYVFFCAIE 146 (235)
T ss_dssp GGGEEEECCCTTTCCCSSCEEEEEEESSTTTSC
T ss_pred CcceEEEECchhcCCCCCCeeEEEEChhhhcCC
Confidence 0123332 1122222 22245889999999887
No 19
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=96.26 E-value=0.028 Score=51.83 Aligned_cols=51 Identities=10% Similarity=0.036 Sum_probs=38.8
Q ss_pred HHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccc
Q 020840 154 EQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (320)
Q Consensus 154 ~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~ 213 (320)
..++.+...+|+|+|||+|.++..+.+. ..+++.||+|+.+.+.-++++..
T Consensus 39 ~~l~l~~g~~VLDlGcGtG~~a~~La~~---------g~~V~gvD~S~~ml~~Ar~~~~~ 89 (261)
T 3iv6_A 39 FLENIVPGSTVAVIGASTRFLIEKALER---------GASVTVFDFSQRMCDDLAEALAD 89 (261)
T ss_dssp HTTTCCTTCEEEEECTTCHHHHHHHHHT---------TCEEEEEESCHHHHHHHHHHTSS
T ss_pred HhcCCCCcCEEEEEeCcchHHHHHHHhc---------CCEEEEEECCHHHHHHHHHHHHh
Confidence 3345545569999999999998877642 12699999999999877777653
No 20
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=96.24 E-value=0.013 Score=51.20 Aligned_cols=57 Identities=14% Similarity=0.162 Sum_probs=42.2
Q ss_pred HHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 148 WAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 148 ~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
|+..+.+.+......+|+|+|||+|.++..+++.. ..+++.||+|+.+.+.-++++.
T Consensus 81 ~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~--------~~~v~~vD~s~~~~~~a~~~~~ 137 (254)
T 1xtp_A 81 GSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKL--------YATTDLLEPVKHMLEEAKRELA 137 (254)
T ss_dssp HHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHH--------CSEEEEEESCHHHHHHHHHHTT
T ss_pred HHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhh--------cCEEEEEeCCHHHHHHHHHHhc
Confidence 44444444544455799999999999998887653 1269999999999887777664
No 21
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=96.23 E-value=0.025 Score=48.82 Aligned_cols=45 Identities=13% Similarity=0.045 Sum_probs=34.6
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
...+|+|+|||+|.++..+++. + ..+++.||+|+.+.+.-++++.
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~----~----~~~v~~vD~s~~~~~~a~~~~~ 87 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEH----G----ASYVLGLDLSEKMLARARAAGP 87 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT----T----CSEEEEEESCHHHHHHHHHTSC
T ss_pred CCCEEEEEcCcCCHHHHHHHHC----C----CCeEEEEcCCHHHHHHHHHhcc
Confidence 3469999999999998776553 1 1179999999999887776653
No 22
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=96.20 E-value=0.011 Score=53.62 Aligned_cols=48 Identities=19% Similarity=0.211 Sum_probs=36.7
Q ss_pred CCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 159 PNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 159 p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
..+.+|+|+|||+|.++..+++. +|. ..+++.||+||.+.+.-++++.
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~---~~~---~~~v~gvD~s~~~~~~a~~~~~ 68 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPL---LPE---GSKYTGIDSGETLLAEARELFR 68 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTT---SCT---TCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCeEEEecCCCCHHHHHHHHh---CCC---CCEEEEEECCHHHHHHHHHHHH
Confidence 34569999999999998887543 221 3579999999999887776654
No 23
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=96.16 E-value=0.027 Score=48.65 Aligned_cols=80 Identities=18% Similarity=0.209 Sum_probs=53.6
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccccccCCcCcccchhhhcccCCCCeEee
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKCMDENNANDNVEERTISSLAGTPVSWH 239 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~~~~~~~~~~~~~~~~~~~~~~~i~W~ 239 (320)
...+|+|+|||+|.++..+++.. | ..+++.||+|+.+.+.-++++.... .+.+.
T Consensus 44 ~~~~vLDiG~G~G~~~~~l~~~~---~----~~~v~~vD~s~~~~~~a~~~~~~~~-------------------~~~~~ 97 (234)
T 3dtn_A 44 ENPDILDLGAGTGLLSAFLMEKY---P----EATFTLVDMSEKMLEIAKNRFRGNL-------------------KVKYI 97 (234)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHC---T----TCEEEEEESCHHHHHHHHHHTCSCT-------------------TEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHhC---C----CCeEEEEECCHHHHHHHHHhhccCC-------------------CEEEE
Confidence 45799999999999998887653 2 2479999999999887777664311 22222
Q ss_pred -cccccCCC-CCCEEEEEecccccccce
Q 020840 240 -AALEQVPS-GFPTIIVAHEFYDALPVH 265 (320)
Q Consensus 240 -~sleelp~-~~~~~iiANE~fDALPv~ 265 (320)
.++.+++. +..-+|+++.++.-++-.
T Consensus 98 ~~d~~~~~~~~~fD~v~~~~~l~~~~~~ 125 (234)
T 3dtn_A 98 EADYSKYDFEEKYDMVVSALSIHHLEDE 125 (234)
T ss_dssp ESCTTTCCCCSCEEEEEEESCGGGSCHH
T ss_pred eCchhccCCCCCceEEEEeCccccCCHH
Confidence 12233322 224578888888877643
No 24
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=96.16 E-value=0.03 Score=47.78 Aligned_cols=79 Identities=18% Similarity=0.238 Sum_probs=51.8
Q ss_pred CCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccccccCCcCcccchhhhcccCCCCe
Q 020840 157 GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKCMDENNANDNVEERTISSLAGTPV 236 (320)
Q Consensus 157 g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~~~~~~~~~~~~~~~~~~~~~~~i 236 (320)
......+|+|+|||+|.++..+++. ..+++.||+|+.+.+.-++++... ..+
T Consensus 48 ~~~~~~~vLDiGcG~G~~~~~l~~~---------~~~v~~vD~s~~~~~~a~~~~~~~-------------------~~~ 99 (216)
T 3ofk_A 48 SSGAVSNGLEIGCAAGAFTEKLAPH---------CKRLTVIDVMPRAIGRACQRTKRW-------------------SHI 99 (216)
T ss_dssp TTSSEEEEEEECCTTSHHHHHHGGG---------EEEEEEEESCHHHHHHHHHHTTTC-------------------SSE
T ss_pred ccCCCCcEEEEcCCCCHHHHHHHHc---------CCEEEEEECCHHHHHHHHHhcccC-------------------CCe
Confidence 3334569999999999988776542 137999999999988777766431 023
Q ss_pred Eee-cccccCC-CCCCEEEEEeccccccc
Q 020840 237 SWH-AALEQVP-SGFPTIIVAHEFYDALP 263 (320)
Q Consensus 237 ~W~-~sleelp-~~~~~~iiANE~fDALP 263 (320)
.+. .++.+++ .+..-+|+++.+|.-+|
T Consensus 100 ~~~~~d~~~~~~~~~fD~v~~~~~l~~~~ 128 (216)
T 3ofk_A 100 SWAATDILQFSTAELFDLIVVAEVLYYLE 128 (216)
T ss_dssp EEEECCTTTCCCSCCEEEEEEESCGGGSS
T ss_pred EEEEcchhhCCCCCCccEEEEccHHHhCC
Confidence 332 1223332 22245888888887777
No 25
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=96.13 E-value=0.06 Score=47.66 Aligned_cols=68 Identities=16% Similarity=0.169 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChh------hHHHHHHhcc
Q 020840 139 QMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPT------LQKLQHHNLK 212 (320)
Q Consensus 139 p~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~------Lr~~Q~e~L~ 212 (320)
.-+...-......+...++.....+|+|+|||+|.++..+++... | ..+++.||+|+. +.+.-++++.
T Consensus 22 ~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g--~----~~~v~gvD~s~~~~~~~~~~~~a~~~~~ 95 (275)
T 3bkx_A 22 RTIQRRQTAHRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVG--S----SGHVTGIDIASPDYGAPLTLGQAWNHLL 95 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHC--T----TCEEEEECSSCTTCCSSSCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhC--C----CCEEEEEECCccccccHHHHHHHHHHHH
Confidence 344455555555566666655556999999999999998876541 1 137999999996 5554444443
No 26
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=96.12 E-value=0.017 Score=50.55 Aligned_cols=56 Identities=7% Similarity=0.164 Sum_probs=40.8
Q ss_pred HHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhc
Q 020840 147 VWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (320)
Q Consensus 147 ~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L 211 (320)
.++.........+...+|+|+|||+|.++..+++. ..+++.||+|+.+.+.-++++
T Consensus 28 ~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~---------~~~v~gvD~s~~~l~~a~~~~ 83 (252)
T 1wzn_A 28 DFVEEIFKEDAKREVRRVLDLACGTGIPTLELAER---------GYEVVGLDLHEEMLRVARRKA 83 (252)
T ss_dssp HHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHT---------TCEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHC---------CCeEEEEECCHHHHHHHHHHH
Confidence 44555555555444569999999999998877652 137999999999987666654
No 27
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=96.11 E-value=0.033 Score=48.13 Aligned_cols=90 Identities=12% Similarity=0.109 Sum_probs=53.8
Q ss_pred hcCCCCcccCCCCCCCCCCCeecCCChhHHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCccc
Q 020840 111 LTNPKAGFYINRDVFGAEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTE 190 (320)
Q Consensus 111 LY~P~~GYY~~~~~~G~~GDFiTSpEIsp~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~ 190 (320)
.+-|+..||.....+| .|..++.|.+.. ++.+.... ......+|+|+|||+|.++..+.+.....+ ..
T Consensus 41 ~f~p~~~y~d~~~~~~-~~~~~~~p~~~~--------~~~~~l~~-~~~~~~~VLdiG~G~G~~~~~la~~~~~~~--~~ 108 (227)
T 2pbf_A 41 KYIKEIPYIDTPVYIS-HGVTISAPHMHA--------LSLKRLIN-VLKPGSRAIDVGSGSGYLTVCMAIKMNVLE--NK 108 (227)
T ss_dssp GTCSSSTTSSSCEEEE-TTEEECCHHHHH--------HHHHHHTT-TSCTTCEEEEESCTTSHHHHHHHHHTTTTT--CT
T ss_pred HcCCcccCCCCccccC-CCCccCChHHHH--------HHHHHHHh-hCCCCCEEEEECCCCCHHHHHHHHHhcccC--CC
Confidence 4556655665443344 244566554321 22222211 122335899999999999998877542100 01
Q ss_pred ceeEEEEecChhhHHHHHHhcc
Q 020840 191 SLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 191 ~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
..+++.||+|+.+.+.-++++.
T Consensus 109 ~~~v~~vD~~~~~~~~a~~~~~ 130 (227)
T 2pbf_A 109 NSYVIGLERVKDLVNFSLENIK 130 (227)
T ss_dssp TCEEEEEESCHHHHHHHHHHHH
T ss_pred CCEEEEEeCCHHHHHHHHHHHH
Confidence 2479999999999887777664
No 28
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=96.09 E-value=0.034 Score=48.64 Aligned_cols=49 Identities=16% Similarity=0.078 Sum_probs=37.5
Q ss_pred HcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHh
Q 020840 155 QMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHN 210 (320)
Q Consensus 155 ~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~ 210 (320)
.++.....+|+|+|||+|.++..+.+.+ |. .+++.||+|+.+.+.-+++
T Consensus 28 ~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~----~~v~~~D~s~~~~~~a~~~ 76 (259)
T 2p35_A 28 QVPLERVLNGYDLGCGPGNSTELLTDRY---GV----NVITGIDSDDDMLEKAADR 76 (259)
T ss_dssp TCCCSCCSSEEEETCTTTHHHHHHHHHH---CT----TSEEEEESCHHHHHHHHHH
T ss_pred hcCCCCCCEEEEecCcCCHHHHHHHHhC---CC----CEEEEEECCHHHHHHHHHh
Confidence 3444445689999999999999887764 22 3699999999998776655
No 29
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=96.08 E-value=0.047 Score=46.37 Aligned_cols=52 Identities=17% Similarity=0.135 Sum_probs=36.8
Q ss_pred HHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccce-eEEEEecChhhHHHHHHhc
Q 020840 147 VWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESL-HIHLVECSPTLQKLQHHNL 211 (320)
Q Consensus 147 ~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l-~y~iVE~Sp~Lr~~Q~e~L 211 (320)
............ ...+|+|+|||+|.++..+ .. +++.||+|+.+.+.-++++
T Consensus 24 ~~~~~~l~~~~~-~~~~vLdiG~G~G~~~~~l------------~~~~v~~vD~s~~~~~~a~~~~ 76 (211)
T 2gs9_A 24 AEEERALKGLLP-PGESLLEVGAGTGYWLRRL------------PYPQKVGVEPSEAMLAVGRRRA 76 (211)
T ss_dssp HHHHHHHHTTCC-CCSEEEEETCTTCHHHHHC------------CCSEEEEECCCHHHHHHHHHHC
T ss_pred HHHHHHHHHhcC-CCCeEEEECCCCCHhHHhC------------CCCeEEEEeCCHHHHHHHHHhC
Confidence 333444444433 4469999999999987755 12 7999999999987766654
No 30
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=96.07 E-value=0.031 Score=47.77 Aligned_cols=82 Identities=12% Similarity=0.255 Sum_probs=51.9
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccccccCCcCcccchhhhcccCCCCeEee-
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKCMDENNANDNVEERTISSLAGTPVSWH- 239 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~~~~~~~~~~~~~~~~~~~~~~~i~W~- 239 (320)
..+|+|+|||+|.++..+++. ..+++.||+|+.+.+.-++++....... .....+.+.
T Consensus 31 ~~~vLdiG~G~G~~~~~l~~~---------~~~v~~vD~s~~~~~~a~~~~~~~~~~~------------~~~~~~~~~~ 89 (235)
T 3sm3_A 31 DDEILDIGCGSGKISLELASK---------GYSVTGIDINSEAIRLAETAARSPGLNQ------------KTGGKAEFKV 89 (235)
T ss_dssp TCEEEEETCTTSHHHHHHHHT---------TCEEEEEESCHHHHHHHHHHTTCCSCCS------------SSSCEEEEEE
T ss_pred CCeEEEECCCCCHHHHHHHhC---------CCeEEEEECCHHHHHHHHHHHHhcCCcc------------ccCcceEEEE
Confidence 458999999999998877653 2379999999999887777665321000 001123332
Q ss_pred cccccCC--CCCCEEEEEeccccccc
Q 020840 240 AALEQVP--SGFPTIIVAHEFYDALP 263 (320)
Q Consensus 240 ~sleelp--~~~~~~iiANE~fDALP 263 (320)
.++.+++ .+..-+|+++.++..+|
T Consensus 90 ~d~~~~~~~~~~~D~v~~~~~l~~~~ 115 (235)
T 3sm3_A 90 ENASSLSFHDSSFDFAVMQAFLTSVP 115 (235)
T ss_dssp CCTTSCCSCTTCEEEEEEESCGGGCC
T ss_pred ecccccCCCCCceeEEEEcchhhcCC
Confidence 2223332 23246788888888886
No 31
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=96.06 E-value=0.011 Score=53.01 Aligned_cols=43 Identities=16% Similarity=0.270 Sum_probs=34.4
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhc
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L 211 (320)
...+|+|+|||+|.++..+++ + ..+++.||+|+.+.+.-++++
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~-----~----~~~v~gvD~s~~~~~~a~~~~ 99 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQ-----S----GAEVLGTDNAATMIEKARQNY 99 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHH-----T----TCEEEEEESCHHHHHHHHHHC
T ss_pred CCCEEEEecCCCCHHHHHHHh-----C----CCeEEEEECCHHHHHHHHhhC
Confidence 345899999999999988876 2 137999999999988766654
No 32
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=96.05 E-value=0.048 Score=47.80 Aligned_cols=45 Identities=13% Similarity=0.113 Sum_probs=35.4
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
...+|+|+|||+|.++..+++.. + .+++.||+|+.+.+.-++++.
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~---~-----~~v~~vD~s~~~~~~a~~~~~ 88 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHG---A-----KKVLGIDLSERMLTEAKRKTT 88 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT---C-----SEEEEEESCHHHHHHHHHHCC
T ss_pred CCCEEEEECCCCCHHHHHHHHcC---C-----CEEEEEECCHHHHHHHHHhhc
Confidence 45699999999999888876531 1 169999999999887777654
No 33
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=96.04 E-value=0.052 Score=50.75 Aligned_cols=73 Identities=19% Similarity=0.316 Sum_probs=51.0
Q ss_pred ecCCC---hhHHHHHHHHHHHH-----HHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhh
Q 020840 132 ITSPE---VSQMFGEMVGVWAM-----CLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTL 203 (320)
Q Consensus 132 iTSpE---Isp~FGe~IA~~i~-----~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~L 203 (320)
...|+ ....|...++.+.. .+.+..+.+...+|+|+|||+|.++..+++. +| .++++.+|+ |.+
T Consensus 154 ~~~p~~~~~~~~f~~~m~~~~~~~~~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~---~p----~~~~~~~D~-~~~ 225 (359)
T 1x19_A 154 VPYPPVTREDNLYFEEIHRSNAKFAIQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKH---FP----ELDSTILNL-PGA 225 (359)
T ss_dssp SCSSCCSHHHHHHHHHHHHTTCHHHHHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHH---CT----TCEEEEEEC-GGG
T ss_pred ccCchhhHHHHHHHHHHHHhccchhHHHHHHhcCCCCCCEEEEECCcccHHHHHHHHH---CC----CCeEEEEec-HHH
Confidence 45577 77777776654322 3334455555579999999999999988775 33 347999999 888
Q ss_pred HHHHHHhcc
Q 020840 204 QKLQHHNLK 212 (320)
Q Consensus 204 r~~Q~e~L~ 212 (320)
.+.-++++.
T Consensus 226 ~~~a~~~~~ 234 (359)
T 1x19_A 226 IDLVNENAA 234 (359)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777666654
No 34
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=96.03 E-value=0.022 Score=48.08 Aligned_cols=44 Identities=18% Similarity=0.290 Sum_probs=34.2
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.-+|+|+|||+|.++..++.. + ..+++.||+|+.+.+.-++++.
T Consensus 45 ~~~vLDlgcG~G~~~~~~~~~----~----~~~v~~vD~~~~~~~~a~~~~~ 88 (189)
T 3p9n_A 45 GLAVLDLYAGSGALGLEALSR----G----AASVLFVESDQRSAAVIARNIE 88 (189)
T ss_dssp TCEEEEETCTTCHHHHHHHHT----T----CSEEEEEECCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcCHHHHHHHHC----C----CCeEEEEECCHHHHHHHHHHHH
Confidence 358999999999998876541 1 2369999999999887766654
No 35
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=96.03 E-value=0.011 Score=53.22 Aligned_cols=47 Identities=21% Similarity=0.372 Sum_probs=37.4
Q ss_pred CCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 157 GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 157 g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
+....-+|+|+|||+|.++..+++.. .+++.||+|+.+.+.-++++.
T Consensus 27 ~~~~~~~VLDiG~G~G~lt~~l~~~~---------~~v~~vD~~~~~~~~a~~~~~ 73 (244)
T 1qam_A 27 RLNEHDNIFEIGSGKGHFTLELVQRC---------NFVTAIEIDHKLCKTTENKLV 73 (244)
T ss_dssp CCCTTCEEEEECCTTSHHHHHHHHHS---------SEEEEECSCHHHHHHHHHHTT
T ss_pred CCCCCCEEEEEeCCchHHHHHHHHcC---------CeEEEEECCHHHHHHHHHhhc
Confidence 33334589999999999999887642 369999999999888777664
No 36
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=96.02 E-value=0.0071 Score=55.39 Aligned_cols=47 Identities=32% Similarity=0.464 Sum_probs=36.8
Q ss_pred CCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 157 GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 157 g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
+....-+|+|+|||+|.|+..+++.. .+++.||+++.+.+.-++++.
T Consensus 26 ~~~~~~~VLEIG~G~G~lt~~La~~~---------~~V~avEid~~~~~~~~~~~~ 72 (255)
T 3tqs_A 26 HPQKTDTLVEIGPGRGALTDYLLTEC---------DNLALVEIDRDLVAFLQKKYN 72 (255)
T ss_dssp CCCTTCEEEEECCTTTTTHHHHTTTS---------SEEEEEECCHHHHHHHHHHHT
T ss_pred CCCCcCEEEEEcccccHHHHHHHHhC---------CEEEEEECCHHHHHHHHHHHh
Confidence 33334589999999999998876531 369999999999988777764
No 37
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=96.00 E-value=0.025 Score=48.75 Aligned_cols=43 Identities=16% Similarity=0.237 Sum_probs=35.0
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhc
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L 211 (320)
...+|+|+|||+|.++..+++... +++.||+|+.+.+.-++++
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~~---------~v~~~D~s~~~~~~a~~~~ 82 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEFG---------DTAGLELSEDMLTHARKRL 82 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHHS---------EEEEEESCHHHHHHHHHHC
T ss_pred CCCeEEEecccCCHHHHHHHHhCC---------cEEEEeCCHHHHHHHHHhC
Confidence 346999999999999988776531 6899999999988777665
No 38
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=95.98 E-value=0.03 Score=48.42 Aligned_cols=42 Identities=17% Similarity=0.157 Sum_probs=33.9
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L 211 (320)
..+|+|+|||+|.++..+.+. ..+++.||+|+.+.+..+++.
T Consensus 54 ~~~vLDiG~G~G~~~~~l~~~---------~~~v~~vD~s~~~~~~a~~~~ 95 (242)
T 3l8d_A 54 EAEVLDVGCGDGYGTYKLSRT---------GYKAVGVDISEVMIQKGKERG 95 (242)
T ss_dssp TCEEEEETCTTSHHHHHHHHT---------TCEEEEEESCHHHHHHHHTTT
T ss_pred CCeEEEEcCCCCHHHHHHHHc---------CCeEEEEECCHHHHHHHHhhc
Confidence 359999999999998877653 237999999999988777653
No 39
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=95.95 E-value=0.021 Score=46.93 Aligned_cols=49 Identities=18% Similarity=0.207 Sum_probs=36.9
Q ss_pred CCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 157 GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 157 g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
+.....+|+|+|||+|.++..+++.. ...+++.||+|+.+.+.-++++.
T Consensus 22 ~~~~~~~vldiG~G~G~~~~~l~~~~-------~~~~v~~vD~~~~~~~~a~~~~~ 70 (178)
T 3hm2_A 22 APKPHETLWDIGGGSGSIAIEWLRST-------PQTTAVCFEISEERRERILSNAI 70 (178)
T ss_dssp CCCTTEEEEEESTTTTHHHHHHHTTS-------SSEEEEEECSCHHHHHHHHHHHH
T ss_pred cccCCCeEEEeCCCCCHHHHHHHHHC-------CCCeEEEEeCCHHHHHHHHHHHH
Confidence 43344699999999999988776532 23579999999998877666654
No 40
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=95.91 E-value=0.014 Score=48.03 Aligned_cols=43 Identities=19% Similarity=0.187 Sum_probs=33.7
Q ss_pred CCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHh
Q 020840 159 PNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHN 210 (320)
Q Consensus 159 p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~ 210 (320)
....+|+|+|||.|.++..+.+.. . +++.||+|+.+.+.-+++
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~--------~-~v~~vD~s~~~~~~a~~~ 58 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFA--------T-KLYCIDINVIALKEVKEK 58 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTE--------E-EEEEECSCHHHHHHHHHH
T ss_pred CCCCeEEEECCCCCHHHHHHHhhc--------C-eEEEEeCCHHHHHHHHHh
Confidence 344699999999999988776532 1 799999999988766665
No 41
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=95.90 E-value=0.014 Score=50.75 Aligned_cols=99 Identities=21% Similarity=0.252 Sum_probs=59.1
Q ss_pred HHHHHHH---hhcCCCCcccCCCCCCCCCCCeecCCChhHHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHH
Q 020840 103 VAEYMEE---VLTNPKAGFYINRDVFGAEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLL 179 (320)
Q Consensus 103 f~dfM~~---aLY~P~~GYY~~~~~~G~~GDFiTSpEIsp~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL 179 (320)
+.+-|.. ..|.|..-|+.....+| .|.+++.|.+....-+.++. ......+|+|+|||+|.++..+.
T Consensus 34 ~~~a~~~~~r~~f~~~~~y~d~~~~~~-~~~~~~~p~~~~~~~~~l~~---------~~~~~~~VLdiG~G~G~~~~~la 103 (227)
T 1r18_A 34 VAQAMKETDRKHYSPRNPYMDAPQPIG-GGVTISAPHMHAFALEYLRD---------HLKPGARILDVGSGSGYLTACFY 103 (227)
T ss_dssp HHHHHHTSCGGGTCSSCTTBSSCEEEE-TTEEECCHHHHHHHHHHTTT---------TCCTTCEEEEESCTTSHHHHHHH
T ss_pred HHHHHHhCCHHHcCCcccccCCCcccC-CCCccCChHHHHHHHHHHHh---------hCCCCCEEEEECCCccHHHHHHH
Confidence 4444442 35666665655544455 34566666654332222110 12223589999999999999888
Q ss_pred HHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 180 RGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 180 ~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
+...... .....+++.||+|+.+.+.-++++.
T Consensus 104 ~~~~~~~-~~~~~~v~~vD~~~~~~~~a~~~~~ 135 (227)
T 1r18_A 104 RYIKAKG-VDADTRIVGIEHQAELVRRSKANLN 135 (227)
T ss_dssp HHHHHSC-CCTTCEEEEEESCHHHHHHHHHHHH
T ss_pred Hhccccc-CCccCEEEEEEcCHHHHHHHHHHHH
Confidence 7653200 0012379999999999887777664
No 42
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=95.88 E-value=0.016 Score=53.69 Aligned_cols=69 Identities=22% Similarity=0.332 Sum_probs=46.9
Q ss_pred CCCCCCCeecCCChhHHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhh
Q 020840 124 VFGAEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTL 203 (320)
Q Consensus 124 ~~G~~GDFiTSpEIsp~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~L 203 (320)
.+| -.|++.+.+-. .+++. .+....-+|+|+|||+|.|+..+++..... ..+++.||+++.+
T Consensus 19 ~~G--Q~fL~d~~i~~--------~iv~~---~~~~~~~~VLEIG~G~G~lt~~La~~~~~~-----~~~V~avDid~~~ 80 (279)
T 3uzu_A 19 RFG--QNFLVDHGVID--------AIVAA---IRPERGERMVEIGPGLGALTGPVIARLATP-----GSPLHAVELDRDL 80 (279)
T ss_dssp CCS--CCEECCHHHHH--------HHHHH---HCCCTTCEEEEECCTTSTTHHHHHHHHCBT-----TBCEEEEECCHHH
T ss_pred cCC--ccccCCHHHHH--------HHHHh---cCCCCcCEEEEEccccHHHHHHHHHhCCCc-----CCeEEEEECCHHH
Confidence 455 37988876532 22222 233334589999999999999988764210 1348999999999
Q ss_pred HHHHHHh
Q 020840 204 QKLQHHN 210 (320)
Q Consensus 204 r~~Q~e~ 210 (320)
.+.-+++
T Consensus 81 l~~a~~~ 87 (279)
T 3uzu_A 81 IGRLEQR 87 (279)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8876665
No 43
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=95.88 E-value=0.054 Score=45.79 Aligned_cols=40 Identities=18% Similarity=0.191 Sum_probs=32.2
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHH
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHH 209 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e 209 (320)
..+|+|+|||+|.++..+.+. ..+++.||+|+.+.+.-++
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~---------~~~v~~~D~s~~~~~~a~~ 86 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLSGL---------ADRVTALDGSAEMIAEAGR 86 (218)
T ss_dssp CSEEEEESCTTSHHHHHHHHH---------SSEEEEEESCHHHHHHHGG
T ss_pred CCeEEEECCCCCHHHHHHHhc---------CCeEEEEeCCHHHHHHHHh
Confidence 359999999999999887764 1379999999998765554
No 44
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=95.87 E-value=0.023 Score=46.57 Aligned_cols=44 Identities=14% Similarity=0.292 Sum_probs=35.2
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
...+|+|+|||+|.++..+.+ ...+++.||+|+.+.+.-++++.
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~---------~~~~v~~vD~~~~~~~~a~~~~~ 78 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAK---------RCKFVYAIDYLDGAIEVTKQNLA 78 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHT---------TSSEEEEEECSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHh---------cCCeEEEEeCCHHHHHHHHHHHH
Confidence 345899999999999887765 12479999999999887777664
No 45
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=95.87 E-value=0.017 Score=49.83 Aligned_cols=50 Identities=14% Similarity=0.077 Sum_probs=37.6
Q ss_pred HHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhc
Q 020840 153 WEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (320)
Q Consensus 153 w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L 211 (320)
+..++.+...+|+|+|||+|.++..+.+. ..+++-||+|+.+.+.-+++.
T Consensus 15 ~~~l~~~~~~~vLD~GCG~G~~~~~la~~---------g~~V~gvD~S~~~l~~a~~~~ 64 (203)
T 1pjz_A 15 WSSLNVVPGARVLVPLCGKSQDMSWLSGQ---------GYHVVGAELSEAAVERYFTER 64 (203)
T ss_dssp HHHHCCCTTCEEEETTTCCSHHHHHHHHH---------CCEEEEEEECHHHHHHHHHHH
T ss_pred HHhcccCCCCEEEEeCCCCcHhHHHHHHC---------CCeEEEEeCCHHHHHHHHHHc
Confidence 34445545569999999999999876652 126999999999988766654
No 46
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=95.79 E-value=0.041 Score=47.20 Aligned_cols=44 Identities=25% Similarity=0.322 Sum_probs=35.1
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.+|+|+|||+|.++..+.+. .+ ..+++.||+|+.+.+.-++++.
T Consensus 31 ~~vLDiGcG~G~~~~~l~~~---~~----~~~v~gvD~s~~~~~~a~~~~~ 74 (217)
T 3jwh_A 31 RRVIDLGCGQGNLLKILLKD---SF----FEQITGVDVSYRSLEIAQERLD 74 (217)
T ss_dssp CEEEEETCTTCHHHHHHHHC---TT----CSEEEEEESCHHHHHHHHHHHT
T ss_pred CEEEEeCCCCCHHHHHHHhh---CC----CCEEEEEECCHHHHHHHHHHHH
Confidence 48999999999998876652 12 2479999999999888777764
No 47
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=95.78 E-value=0.03 Score=47.55 Aligned_cols=45 Identities=13% Similarity=0.201 Sum_probs=34.4
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
..-+|+|+|||+|.++..+.+. + ..+++-||+|+.+.+.-++++.
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~----~----~~~v~~vD~~~~~~~~a~~~~~ 95 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLL----G----AESVTAFDIDPDAIETAKRNCG 95 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHT----T----BSEEEEEESCHHHHHHHHHHCT
T ss_pred CCCEEEEEeCCccHHHHHHHHc----C----CCEEEEEECCHHHHHHHHHhcC
Confidence 3458999999999988776542 1 1269999999999887776653
No 48
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=95.78 E-value=0.03 Score=48.11 Aligned_cols=42 Identities=33% Similarity=0.400 Sum_probs=32.7
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.+|+|+|||+|.++..+.+. .+ +++.||+|+.+.+.-++++.
T Consensus 44 ~~vLDiGcG~G~~~~~l~~~---~~------~v~gvD~s~~~~~~a~~~~~ 85 (250)
T 2p7i_A 44 GNLLELGSFKGDFTSRLQEH---FN------DITCVEASEEAISHAQGRLK 85 (250)
T ss_dssp SCEEEESCTTSHHHHHHTTT---CS------CEEEEESCHHHHHHHHHHSC
T ss_pred CcEEEECCCCCHHHHHHHHh---CC------cEEEEeCCHHHHHHHHHhhh
Confidence 48999999999988776542 11 58999999998877766553
No 49
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=95.78 E-value=0.012 Score=59.59 Aligned_cols=73 Identities=16% Similarity=0.238 Sum_probs=54.8
Q ss_pred CCCCeecCCChhHHHHHHHHHHHHHHHHHcCCC-CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHH
Q 020840 127 AEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQP-NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQK 205 (320)
Q Consensus 127 ~~GDFiTSpEIsp~FGe~IA~~i~~~w~~~g~p-~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~ 205 (320)
+.|.|||+++|..+..+++.. ...| ...+|+|.+||+|.|...+++.++..+ ..+++-+|+++....
T Consensus 195 ~~G~fyTP~~Vv~lmv~ll~~--------~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~----~~~i~G~Eid~~~~~ 262 (542)
T 3lkd_A 195 KAGEFYTPQPVAKLMTQIAFL--------GREDKQGFTLYDATMGSGSLLLNAKRYSRQPQ----TVVYFGQELNTSTYN 262 (542)
T ss_dssp CCSSCCCCHHHHHHHHHHHHT--------TCTTCTTCEEEETTCTTSTTGGGHHHHCSCTT----TCEEEEEESCHHHHH
T ss_pred cCCeecccHHHHHHHHHHHhc--------ccCCCCCCEEeecccchhHHHHHHHHHHHhcc----CceEEEEECcHHHHH
Confidence 479999999998776665432 1111 346899999999999998888775322 457999999999888
Q ss_pred HHHHhc
Q 020840 206 LQHHNL 211 (320)
Q Consensus 206 ~Q~e~L 211 (320)
.-+..+
T Consensus 263 lA~~Nl 268 (542)
T 3lkd_A 263 LARMNM 268 (542)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776655
No 50
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=95.76 E-value=0.064 Score=49.06 Aligned_cols=84 Identities=19% Similarity=0.152 Sum_probs=54.5
Q ss_pred CCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccccccCCcCcccchhhhcccCCCCeE
Q 020840 158 QPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKCMDENNANDNVEERTISSLAGTPVS 237 (320)
Q Consensus 158 ~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~~~~~~~~~~~~~~~~~~~~~~~i~ 237 (320)
.....+|+|+|||.|.++..+.+.. ..+++.||+|+.+.+.-++++.... ....+.
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~--------~~~v~gvD~s~~~~~~a~~~~~~~~----------------~~~~v~ 170 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRF--------GSRVEGVTLSAAQADFGNRRARELR----------------IDDHVR 170 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH--------CCEEEEEESCHHHHHHHHHHHHHTT----------------CTTTEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHc--------CCEEEEEeCCHHHHHHHHHHHHHcC----------------CCCceE
Confidence 3345699999999999998887653 1369999999998887766654310 001233
Q ss_pred ee-cccccCC--CCCCEEEEEecccccccce
Q 020840 238 WH-AALEQVP--SGFPTIIVAHEFYDALPVH 265 (320)
Q Consensus 238 W~-~sleelp--~~~~~~iiANE~fDALPv~ 265 (320)
+. .++.+++ .+..-+|++++++..++..
T Consensus 171 ~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~ 201 (312)
T 3vc1_A 171 SRVCNMLDTPFDKGAVTASWNNESTMYVDLH 201 (312)
T ss_dssp EEECCTTSCCCCTTCEEEEEEESCGGGSCHH
T ss_pred EEECChhcCCCCCCCEeEEEECCchhhCCHH
Confidence 32 2233333 2334688899888887633
No 51
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=95.75 E-value=0.036 Score=47.10 Aligned_cols=68 Identities=19% Similarity=0.182 Sum_probs=44.4
Q ss_pred CCeecCCChhHHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHH
Q 020840 129 GDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQH 208 (320)
Q Consensus 129 GDFiTSpEIsp~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~ 208 (320)
|.|.|++++....-+. + ...+....-+|+|+|||+|.++..+.+. + ..+++.||+|+.+.+.-+
T Consensus 26 ~~~~~~~~~~~~l~~~----~----~~~~~~~~~~vlD~g~G~G~~~~~l~~~----~----~~~v~~vD~~~~~~~~a~ 89 (207)
T 1wy7_A 26 EQYRTPGNAASELLWL----A----YSLGDIEGKVVADLGAGTGVLSYGALLL----G----AKEVICVEVDKEAVDVLI 89 (207)
T ss_dssp TCCCCCHHHHHHHHHH----H----HHTTSSTTCEEEEETCTTCHHHHHHHHT----T----CSEEEEEESCHHHHHHHH
T ss_pred eeecCchHHHHHHHHH----H----HHcCCCCcCEEEEeeCCCCHHHHHHHHc----C----CCEEEEEECCHHHHHHHH
Confidence 3477876654432222 1 1223223458999999999988876542 1 126999999999988777
Q ss_pred Hhcc
Q 020840 209 HNLK 212 (320)
Q Consensus 209 e~L~ 212 (320)
+++.
T Consensus 90 ~~~~ 93 (207)
T 1wy7_A 90 ENLG 93 (207)
T ss_dssp HHTG
T ss_pred HHHH
Confidence 7664
No 52
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=95.75 E-value=0.07 Score=46.55 Aligned_cols=43 Identities=14% Similarity=0.327 Sum_probs=34.8
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhc
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L 211 (320)
...+|+|+|||+|.++..+++. ..+++.||+|+.+.+.-++++
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~---------~~~v~~vD~s~~~~~~a~~~~ 81 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIAR---------GYRYIALDADAAMLEVFRQKI 81 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTT---------TCEEEEEESCHHHHHHHHHHT
T ss_pred CCCEEEEeCCcCCHHHHHHHHC---------CCEEEEEECCHHHHHHHHHHh
Confidence 4469999999999998877642 136999999999988777765
No 53
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=95.73 E-value=0.055 Score=45.68 Aligned_cols=41 Identities=20% Similarity=0.263 Sum_probs=32.8
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L 211 (320)
.+|+|+|||+|.++..+.+. ..+++.||+|+.+.+.-+++.
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~---------~~~v~gvD~s~~~~~~a~~~~ 83 (203)
T 3h2b_A 43 GVILDVGSGTGRWTGHLASL---------GHQIEGLEPATRLVELARQTH 83 (203)
T ss_dssp SCEEEETCTTCHHHHHHHHT---------TCCEEEECCCHHHHHHHHHHC
T ss_pred CeEEEecCCCCHHHHHHHhc---------CCeEEEEeCCHHHHHHHHHhC
Confidence 48999999999988877653 126999999999887766653
No 54
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=95.72 E-value=0.083 Score=49.90 Aligned_cols=71 Identities=25% Similarity=0.417 Sum_probs=47.5
Q ss_pred CCChhHHHHHHHHHHH----HHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHH
Q 020840 134 SPEVSQMFGEMVGVWA----MCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHH 209 (320)
Q Consensus 134 SpEIsp~FGe~IA~~i----~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e 209 (320)
.|+....|...++.+. ..+.+..+.+...+|+|+|||+|.++..+++. +| .++++.+|+ |...+.-++
T Consensus 172 ~~~~~~~f~~~m~~~~~~~~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~---~p----~~~~~~~D~-~~~~~~a~~ 243 (369)
T 3gwz_A 172 DPKARELFNRAMGSVSLTEAGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDA---FP----GLRGTLLER-PPVAEEARE 243 (369)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHH---CT----TCEEEEEEC-HHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhhhHHHHHHhCCCccCcEEEEeCCCccHHHHHHHHH---CC----CCeEEEEcC-HHHHHHHHH
Confidence 4566666666555432 22333344445579999999999999888775 33 347899999 887666665
Q ss_pred hcc
Q 020840 210 NLK 212 (320)
Q Consensus 210 ~L~ 212 (320)
++.
T Consensus 244 ~~~ 246 (369)
T 3gwz_A 244 LLT 246 (369)
T ss_dssp HHH
T ss_pred hhh
Confidence 553
No 55
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=95.72 E-value=0.051 Score=46.26 Aligned_cols=42 Identities=24% Similarity=0.406 Sum_probs=33.5
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L 211 (320)
..+|+|+|||+|.++..+++. ..+++.||+|+.+.+.-++++
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~---------~~~v~~vD~s~~~~~~a~~~~ 85 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAA---------GFDVDATDGSPELAAEASRRL 85 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHT---------TCEEEEEESCHHHHHHHHHHH
T ss_pred CCcEEEECCCCCHHHHHHHHc---------CCeEEEECCCHHHHHHHHHhc
Confidence 458999999999998877653 237999999999887666654
No 56
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=95.70 E-value=0.0098 Score=52.84 Aligned_cols=44 Identities=11% Similarity=0.098 Sum_probs=33.6
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.-+|+|||||.|.++..|.+ ..| -+++.||+||.+.+.-+++..
T Consensus 61 G~rVLdiG~G~G~~~~~~~~---~~~-----~~v~~id~~~~~~~~a~~~~~ 104 (236)
T 3orh_A 61 GGRVLEVGFGMAIAASKVQE---API-----DEHWIIECNDGVFQRLRDWAP 104 (236)
T ss_dssp CEEEEEECCTTSHHHHHHTT---SCE-----EEEEEEECCHHHHHHHHHHGG
T ss_pred CCeEEEECCCccHHHHHHHH---hCC-----cEEEEEeCCHHHHHHHHHHHh
Confidence 35999999999998876643 223 268999999999887766554
No 57
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=95.70 E-value=0.022 Score=47.56 Aligned_cols=44 Identities=16% Similarity=0.070 Sum_probs=35.0
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
..-+|+|+|||+|.++..+.+. ..+++-||+|+.+.+.-++++.
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~---------~~~v~~vD~s~~~l~~a~~~~~ 65 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGL---------SKKVYAFDVQEQALGKTSQRLS 65 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTT---------SSEEEEEESCHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCHHHHHHHHh---------CCEEEEEECCHHHHHHHHHHHH
Confidence 3458999999999999876543 2479999999999887776664
No 58
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=95.69 E-value=0.039 Score=47.27 Aligned_cols=44 Identities=27% Similarity=0.372 Sum_probs=35.0
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.+|+|+|||+|.++..+.+. .| ..+++-||+|+.+.+.-++++.
T Consensus 31 ~~vLDiGcG~G~~~~~l~~~---~~----~~~v~gvD~s~~~~~~a~~~~~ 74 (219)
T 3jwg_A 31 KKVIDLGCGEGNLLSLLLKD---KS----FEQITGVDVSYSVLERAKDRLK 74 (219)
T ss_dssp CEEEEETCTTCHHHHHHHTS---TT----CCEEEEEESCHHHHHHHHHHHT
T ss_pred CEEEEecCCCCHHHHHHHhc---CC----CCEEEEEECCHHHHHHHHHHHH
Confidence 59999999999988776542 12 2479999999999988887764
No 59
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=95.67 E-value=0.019 Score=49.49 Aligned_cols=57 Identities=12% Similarity=0.104 Sum_probs=39.8
Q ss_pred HHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 146 GVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 146 A~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
..++.......+ +...+|+|+|||+|.++..+++. ..+++.||+|+.+.+.-++++.
T Consensus 24 ~~~~~~~l~~~~-~~~~~vLdiG~G~G~~~~~l~~~---------~~~~~~~D~s~~~~~~a~~~~~ 80 (246)
T 1y8c_A 24 SDFIIEKCVENN-LVFDDYLDLACGTGNLTENLCPK---------FKNTWAVDLSQEMLSEAENKFR 80 (246)
T ss_dssp HHHHHHHHHTTT-CCTTEEEEETCTTSTTHHHHGGG---------SSEEEEECSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC-CCCCeEEEeCCCCCHHHHHHHHC---------CCcEEEEECCHHHHHHHHHHHh
Confidence 344444444332 23469999999999998876542 1369999999999887766653
No 60
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=95.67 E-value=0.032 Score=49.67 Aligned_cols=61 Identities=10% Similarity=0.022 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 144 MVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 144 ~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.+..|+.........+...+|+|+|||+|.++..+.+. + ..+++.||+|+.+.+.-++++.
T Consensus 48 ~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~----~----~~~v~gvD~s~~~~~~a~~~~~ 108 (298)
T 1ri5_A 48 NANNFIKACLIRLYTKRGDSVLDLGCGKGGDLLKYERA----G----IGEYYGVDIAEVSINDARVRAR 108 (298)
T ss_dssp HHHHHHHHHHHHHHCCTTCEEEEETCTTTTTHHHHHHH----T----CSEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHC----C----CCEEEEEECCHHHHHHHHHHHH
Confidence 34445544433322233469999999999988875542 1 1379999999999887777664
No 61
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=95.67 E-value=0.023 Score=48.20 Aligned_cols=44 Identities=14% Similarity=0.169 Sum_probs=35.0
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.+|+|+|||+|.++..++... | ..+++.||+|+.+.+.-++++.
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~---~----~~~v~~vD~s~~~~~~a~~~~~ 110 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVR---P----EAHFTLLDSLGKRVRFLRQVQH 110 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHC---T----TSEEEEEESCHHHHHHHHHHHH
T ss_pred CeEEEECCCCCHHHHHHHHHC---C----CCEEEEEeCCHHHHHHHHHHHH
Confidence 489999999999998877643 2 2479999999998876666554
No 62
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=95.62 E-value=0.072 Score=46.54 Aligned_cols=82 Identities=13% Similarity=0.153 Sum_probs=52.4
Q ss_pred CCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccccccCCcCcccchhhhcccCCCCeEe
Q 020840 159 PNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKCMDENNANDNVEERTISSLAGTPVSW 238 (320)
Q Consensus 159 p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~~~~~~~~~~~~~~~~~~~~~~~i~W 238 (320)
+...+|+|+|||+|.++..+.+.. + .+++.||+|+.+.+.-++++.... ...++.+
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~---~-----~~v~~vD~s~~~~~~a~~~~~~~~----------------~~~~~~~ 100 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYV---K-----GQITGIDLFPDFIEIFNENAVKAN----------------CADRVKG 100 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHC---C-----SEEEEEESCHHHHHHHHHHHHHTT----------------CTTTEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhC---C-----CeEEEEECCHHHHHHHHHHHHHcC----------------CCCceEE
Confidence 344599999999999998887653 2 179999999999887766654311 0012332
Q ss_pred e-cccccCC--CCCCEEEEEecccccccc
Q 020840 239 H-AALEQVP--SGFPTIIVAHEFYDALPV 264 (320)
Q Consensus 239 ~-~sleelp--~~~~~~iiANE~fDALPv 264 (320)
. .++.+++ .+..-+|+++.++..++.
T Consensus 101 ~~~d~~~~~~~~~~fD~v~~~~~l~~~~~ 129 (257)
T 3f4k_A 101 ITGSMDNLPFQNEELDLIWSEGAIYNIGF 129 (257)
T ss_dssp EECCTTSCSSCTTCEEEEEEESCSCCCCH
T ss_pred EECChhhCCCCCCCEEEEEecChHhhcCH
Confidence 2 2233333 222458888888777643
No 63
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=95.62 E-value=0.031 Score=48.84 Aligned_cols=48 Identities=13% Similarity=0.254 Sum_probs=37.2
Q ss_pred CCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 157 GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 157 g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
+.+...+|+|+|||+|.++..+++.. ..+++.||+|+.+.+.-++++.
T Consensus 33 ~~~~~~~VLDiGcG~G~~~~~la~~~--------~~~v~gvD~s~~~l~~a~~~~~ 80 (256)
T 1nkv_A 33 RMKPGTRILDLGSGSGEMLCTWARDH--------GITGTGIDMSSLFTAQAKRRAE 80 (256)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHHT--------CCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHhc--------CCeEEEEeCCHHHHHHHHHHHH
Confidence 44445699999999999998887653 1368999999999887766654
No 64
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=95.61 E-value=0.035 Score=47.30 Aligned_cols=66 Identities=26% Similarity=0.280 Sum_probs=45.8
Q ss_pred CCCeecCCChhHHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHH
Q 020840 128 EGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQ 207 (320)
Q Consensus 128 ~GDFiTSpEIsp~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q 207 (320)
.|.+++.|.+....- +.++.....+|+|+|||+|.++..+.+. ..+++.||+|+.+.+.-
T Consensus 56 ~~~~~~~~~~~~~~~-----------~~l~~~~~~~vLdiG~G~G~~~~~la~~---------~~~v~~vD~~~~~~~~a 115 (210)
T 3lbf_A 56 QGQTISQPYMVARMT-----------ELLELTPQSRVLEIGTGSGYQTAILAHL---------VQHVCSVERIKGLQWQA 115 (210)
T ss_dssp TSCEECCHHHHHHHH-----------HHTTCCTTCEEEEECCTTSHHHHHHHHH---------SSEEEEEESCHHHHHHH
T ss_pred CCCEeCCHHHHHHHH-----------HhcCCCCCCEEEEEcCCCCHHHHHHHHh---------CCEEEEEecCHHHHHHH
Confidence 466777665433221 1223334469999999999999877664 13799999999998877
Q ss_pred HHhccc
Q 020840 208 HHNLKC 213 (320)
Q Consensus 208 ~e~L~~ 213 (320)
++++..
T Consensus 116 ~~~~~~ 121 (210)
T 3lbf_A 116 RRRLKN 121 (210)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776653
No 65
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=95.60 E-value=0.067 Score=47.24 Aligned_cols=44 Identities=14% Similarity=0.185 Sum_probs=33.9
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
...+|+|+|||+|.++..+++. ..+++.||+|+.+.+.-++++.
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~---------~~~v~gvD~s~~~~~~a~~~~~ 93 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADS---------FGTVEGLELSADMLAIARRRNP 93 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTT---------SSEEEEEESCHHHHHHHHHHCT
T ss_pred CCCcEEEeCCcCCHHHHHHHHc---------CCeEEEEECCHHHHHHHHhhCC
Confidence 3468999999999988776542 1268999999999887766543
No 66
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=95.60 E-value=0.03 Score=47.71 Aligned_cols=49 Identities=16% Similarity=0.234 Sum_probs=37.4
Q ss_pred CCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 157 GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 157 g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
+.....+|+|+|||+|.++..+.+.. | ..+++.||+|+.+.+.-++++.
T Consensus 37 ~~~~~~~vLDiG~G~G~~~~~la~~~---~----~~~v~~vD~s~~~~~~a~~~~~ 85 (204)
T 3e05_A 37 RLQDDLVMWDIGAGSASVSIEASNLM---P----NGRIFALERNPQYLGFIRDNLK 85 (204)
T ss_dssp TCCTTCEEEEETCTTCHHHHHHHHHC---T----TSEEEEEECCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHHC---C----CCEEEEEeCCHHHHHHHHHHHH
Confidence 44344699999999999998877652 2 2479999999999877666553
No 67
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=95.59 E-value=0.073 Score=45.91 Aligned_cols=45 Identities=11% Similarity=0.142 Sum_probs=36.1
Q ss_pred CcceEEEecCC-chhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 160 NRVNLVELGPG-RGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 160 ~~l~IvEiGaG-~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
...+|+|+||| +|.++..+.+.. ..+++.||+|+.+.+.-++++.
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~--------~~~v~~vD~s~~~~~~a~~~~~ 100 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFF--------NCKVTATEVDEEFFEYARRNIE 100 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHH--------CCEEEEEECCHHHHHHHHHHHH
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhc--------CCEEEEEECCHHHHHHHHHHHH
Confidence 34699999999 999998877653 2379999999999887776654
No 68
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=95.58 E-value=0.028 Score=46.36 Aligned_cols=44 Identities=20% Similarity=0.310 Sum_probs=35.0
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
...+|+|+|||+|.++..+++. ..+++.||+|+.+.+.-++++.
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~---------~~~v~~~D~~~~~~~~a~~~~~ 95 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADE---------VKSTTMADINRRAIKLAKENIK 95 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGG---------SSEEEEEESCHHHHHHHHHHHH
T ss_pred CCCeEEEeCCCCCHHHHHHHHc---------CCeEEEEECCHHHHHHHHHHHH
Confidence 4458999999999998876543 2379999999999887777664
No 69
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=95.54 E-value=0.011 Score=59.79 Aligned_cols=73 Identities=19% Similarity=0.271 Sum_probs=54.2
Q ss_pred CCCCeecCCChhHHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcC-cCc-------ccceeEEEEe
Q 020840 127 AEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKF-KNF-------TESLHIHLVE 198 (320)
Q Consensus 127 ~~GDFiTSpEIsp~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~-p~~-------~~~l~y~iVE 198 (320)
+.|.|+|+++|..+..+++ .|.+.+|+|.+||+|.|...+++++... +.. .....++-+|
T Consensus 223 ~~G~fyTP~~Vv~lmv~ll------------~p~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~E 290 (544)
T 3khk_A 223 QGGQYYTPKSIVTLIVEML------------EPYKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQE 290 (544)
T ss_dssp CSTTTCCCHHHHHHHHHHH------------CCCSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECC
T ss_pred cCCeEeCCHHHHHHHHHHH------------hcCCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEe
Confidence 4689999999987766654 2334599999999999999988877531 110 1146799999
Q ss_pred cChhhHHHHHHhc
Q 020840 199 CSPTLQKLQHHNL 211 (320)
Q Consensus 199 ~Sp~Lr~~Q~e~L 211 (320)
+++...+.-+..+
T Consensus 291 id~~~~~lA~~Nl 303 (544)
T 3khk_A 291 SNPTTWKLAAMNM 303 (544)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 9999988766654
No 70
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=95.54 E-value=0.036 Score=54.06 Aligned_cols=74 Identities=16% Similarity=0.241 Sum_probs=51.1
Q ss_pred CCCCeecCCChhHHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCc-C-----cccceeEEEEecC
Q 020840 127 AEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFK-N-----FTESLHIHLVECS 200 (320)
Q Consensus 127 ~~GDFiTSpEIsp~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p-~-----~~~~l~y~iVE~S 200 (320)
..|.|+|+.+|..+..+++ ......+|+|.|||+|.+...+.+.++... + .....+++-+|++
T Consensus 149 ~~G~fyTP~~v~~~mv~~l-----------~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~ 217 (445)
T 2okc_A 149 GAGQYFTPRPLIQAMVDCI-----------NPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNT 217 (445)
T ss_dssp CCGGGCCCHHHHHHHHHHH-----------CCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESC
T ss_pred cCCcccCcHHHHHHHHHHh-----------CCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCC
Confidence 4689999988755444332 112235899999999999999988875321 0 0112468999999
Q ss_pred hhhHHHHHHhc
Q 020840 201 PTLQKLQHHNL 211 (320)
Q Consensus 201 p~Lr~~Q~e~L 211 (320)
|...+.-+..+
T Consensus 218 ~~~~~lA~~nl 228 (445)
T 2okc_A 218 PLVVTLASMNL 228 (445)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99887666655
No 71
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=95.53 E-value=0.016 Score=50.78 Aligned_cols=41 Identities=15% Similarity=0.225 Sum_probs=31.9
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHh
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHN 210 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~ 210 (320)
..+|+|+|||+|.++..+.+. ..+++-||+|+.+.+.-+++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~---------~~~v~gvD~s~~~~~~a~~~ 82 (240)
T 3dli_A 42 CRRVLDIGCGRGEFLELCKEE---------GIESIGVDINEDMIKFCEGK 82 (240)
T ss_dssp CSCEEEETCTTTHHHHHHHHH---------TCCEEEECSCHHHHHHHHTT
T ss_pred CCeEEEEeCCCCHHHHHHHhC---------CCcEEEEECCHHHHHHHHhh
Confidence 358999999999998766543 12589999999987766554
No 72
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=95.53 E-value=0.027 Score=48.07 Aligned_cols=50 Identities=10% Similarity=0.275 Sum_probs=38.6
Q ss_pred CCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 157 GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 157 g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
+.....+|+|+|||+|.++..+++... | ..+++.||+|+.+.+.-++++.
T Consensus 34 ~~~~~~~vLDiG~G~G~~~~~l~~~~~--~----~~~v~~vD~s~~~~~~a~~~~~ 83 (219)
T 3dh0_A 34 GLKEGMTVLDVGTGAGFYLPYLSKMVG--E----KGKVYAIDVQEEMVNYAWEKVN 83 (219)
T ss_dssp TCCTTCEEEESSCTTCTTHHHHHHHHT--T----TCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEEecCCCHHHHHHHHHhC--C----CcEEEEEECCHHHHHHHHHHHH
Confidence 444456999999999999998887642 1 2379999999999887776654
No 73
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=95.53 E-value=0.025 Score=52.02 Aligned_cols=47 Identities=26% Similarity=0.408 Sum_probs=36.9
Q ss_pred CCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 157 GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 157 g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
+....-+|+|+|||+|.++..+++.. .+++-||+|+.+.+.-++++.
T Consensus 25 ~~~~~~~VLDiG~G~G~lt~~L~~~~---------~~v~~vD~~~~~~~~a~~~~~ 71 (285)
T 1zq9_A 25 ALRPTDVVLEVGPGTGNMTVKLLEKA---------KKVVACELDPRLVAELHKRVQ 71 (285)
T ss_dssp CCCTTCEEEEECCTTSTTHHHHHHHS---------SEEEEEESCHHHHHHHHHHHT
T ss_pred CCCCCCEEEEEcCcccHHHHHHHhhC---------CEEEEEECCHHHHHHHHHHHH
Confidence 33344589999999999999887641 268999999999887777664
No 74
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=95.53 E-value=0.025 Score=49.46 Aligned_cols=81 Identities=10% Similarity=0.152 Sum_probs=54.1
Q ss_pred cCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccccccCCcCcccchhhhcccCCCC
Q 020840 156 MGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKCMDENNANDNVEERTISSLAGTP 235 (320)
Q Consensus 156 ~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~~~~~~~~~~~~~~~~~~~~~~~ 235 (320)
++.....+|+|+|||+|.++..+++.. ..+++.||+|+.+.+.-++++... ..
T Consensus 51 ~~~~~~~~vLdiG~G~G~~~~~l~~~~--------~~~v~~vD~s~~~~~~a~~~~~~~-------------------~~ 103 (266)
T 3ujc_A 51 IELNENSKVLDIGSGLGGGCMYINEKY--------GAHTHGIDICSNIVNMANERVSGN-------------------NK 103 (266)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHH--------CCEEEEEESCHHHHHHHHHTCCSC-------------------TT
T ss_pred cCCCCCCEEEEECCCCCHHHHHHHHHc--------CCEEEEEeCCHHHHHHHHHHhhcC-------------------CC
Confidence 444455699999999999999888754 137999999999988777765431 12
Q ss_pred eEee-cccccCC--CCCCEEEEEeccccccc
Q 020840 236 VSWH-AALEQVP--SGFPTIIVAHEFYDALP 263 (320)
Q Consensus 236 i~W~-~sleelp--~~~~~~iiANE~fDALP 263 (320)
+.+. .++.+++ .+..-+|+++.++..+|
T Consensus 104 ~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 134 (266)
T 3ujc_A 104 IIFEANDILTKEFPENNFDLIYSRDAILALS 134 (266)
T ss_dssp EEEEECCTTTCCCCTTCEEEEEEESCGGGSC
T ss_pred eEEEECccccCCCCCCcEEEEeHHHHHHhcC
Confidence 2221 1222222 23346888888887774
No 75
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=95.51 E-value=0.018 Score=52.56 Aligned_cols=43 Identities=21% Similarity=0.250 Sum_probs=33.1
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.-+|+|+|||+|.|+. |.. . ...+++.||+++.+.+.-++++.
T Consensus 22 ~~~VLEIG~G~G~lt~--l~~---~----~~~~v~avEid~~~~~~a~~~~~ 64 (252)
T 1qyr_A 22 GQAMVEIGPGLAALTE--PVG---E----RLDQLTVIELDRDLAARLQTHPF 64 (252)
T ss_dssp TCCEEEECCTTTTTHH--HHH---T----TCSCEEEECCCHHHHHHHHTCTT
T ss_pred cCEEEEECCCCcHHHH--hhh---C----CCCeEEEEECCHHHHHHHHHHhc
Confidence 3589999999999999 432 1 11248999999999988777664
No 76
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=95.50 E-value=0.041 Score=47.03 Aligned_cols=47 Identities=19% Similarity=0.233 Sum_probs=37.1
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
...+|+|+|||+|.++..+++... | ..+++.||+|+.+.+.-++++.
T Consensus 77 ~~~~vLdiG~G~G~~~~~l~~~~~--~----~~~v~~vD~~~~~~~~a~~~~~ 123 (215)
T 2yxe_A 77 PGMKVLEIGTGCGYHAAVTAEIVG--E----DGLVVSIERIPELAEKAERTLR 123 (215)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHC--T----TSEEEEEESCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHHHHhC--C----CCEEEEEeCCHHHHHHHHHHHH
Confidence 345999999999999998887651 1 1379999999999887777664
No 77
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=95.49 E-value=0.031 Score=47.06 Aligned_cols=76 Identities=18% Similarity=0.280 Sum_probs=50.4
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccccccCCcCcccchhhhcccCCCCeEee-
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKCMDENNANDNVEERTISSLAGTPVSWH- 239 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~~~~~~~~~~~~~~~~~~~~~~~i~W~- 239 (320)
..+|+|+|||+|.++..+++. .+ .+++.||+|+.+.+.-++++... ..+.+.
T Consensus 43 ~~~vLdiGcG~G~~~~~l~~~---~~-----~~v~~~D~s~~~~~~a~~~~~~~-------------------~~i~~~~ 95 (215)
T 2pxx_A 43 EDRILVLGCGNSALSYELFLG---GF-----PNVTSVDYSSVVVAAMQACYAHV-------------------PQLRWET 95 (215)
T ss_dssp TCCEEEETCTTCSHHHHHHHT---TC-----CCEEEEESCHHHHHHHHHHTTTC-------------------TTCEEEE
T ss_pred CCeEEEECCCCcHHHHHHHHc---CC-----CcEEEEeCCHHHHHHHHHhcccC-------------------CCcEEEE
Confidence 358999999999999887653 11 16999999999988777766420 012221
Q ss_pred cccccC--CCCCCEEEEEeccccccc
Q 020840 240 AALEQV--PSGFPTIIVAHEFYDALP 263 (320)
Q Consensus 240 ~sleel--p~~~~~~iiANE~fDALP 263 (320)
.++.++ +.+..-+|+++-.+++++
T Consensus 96 ~d~~~~~~~~~~fD~v~~~~~~~~~~ 121 (215)
T 2pxx_A 96 MDVRKLDFPSASFDVVLEKGTLDALL 121 (215)
T ss_dssp CCTTSCCSCSSCEEEEEEESHHHHHT
T ss_pred cchhcCCCCCCcccEEEECcchhhhc
Confidence 112222 223246889999998876
No 78
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=95.46 E-value=0.034 Score=46.87 Aligned_cols=47 Identities=13% Similarity=-0.006 Sum_probs=37.0
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~ 213 (320)
..+|+|+|||+|.++..+++.+. | ..+++.||+|+.+.+.-++++..
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~--~----~~~v~~vD~s~~~~~~a~~~~~~ 69 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLVG--E----NGRVFGFDIQDKAIANTTKKLTD 69 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHHC--T----TCEEEEECSCHHHHHHHHHHHHH
T ss_pred CCEEEEcCCCCCHHHHHHHHHhC--C----CCEEEEEECCHHHHHHHHHHHHH
Confidence 35899999999999998887652 1 13799999999998877776643
No 79
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=95.45 E-value=0.032 Score=45.94 Aligned_cols=46 Identities=17% Similarity=0.249 Sum_probs=35.6
Q ss_pred CCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 158 QPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 158 ~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.....+|+|+|||+|.++..+++.. .+++.||+|+.+.+.-++++.
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~---------~~v~~~D~~~~~~~~a~~~~~ 76 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRV---------RRVYAIDRNPEAISTTEMNLQ 76 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTS---------SEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhc---------CEEEEEECCHHHHHHHHHHHH
Confidence 3344699999999999988776532 379999999998887766654
No 80
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=95.42 E-value=0.042 Score=47.45 Aligned_cols=44 Identities=18% Similarity=0.194 Sum_probs=36.1
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
...+|+|+|||+|.++..+.+.. .+++.||+|+.+.+.-++++.
T Consensus 70 ~~~~vLdiG~G~G~~~~~l~~~~---------~~v~~vD~~~~~~~~a~~~~~ 113 (231)
T 1vbf_A 70 KGQKVLEIGTGIGYYTALIAEIV---------DKVVSVEINEKMYNYASKLLS 113 (231)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS---------SEEEEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEEcCCCCHHHHHHHHHc---------CEEEEEeCCHHHHHHHHHHHh
Confidence 34589999999999998877642 369999999999888777664
No 81
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=95.42 E-value=0.049 Score=48.81 Aligned_cols=43 Identities=12% Similarity=0.107 Sum_probs=34.0
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
..+|+|+|||+|.++..+.+. ..+++.||+|+.+.+.-++++.
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~---------g~~v~~vD~s~~~~~~a~~~~~ 163 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLL---------GYDVTSWDHNENSIAFLNETKE 163 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHT---------TCEEEEEESCHHHHHHHHHHHH
T ss_pred CCcEEEECCCCCHHHHHHHHC---------CCeEEEEECCHHHHHHHHHHHH
Confidence 358999999999988876653 1379999999998877666554
No 82
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=95.41 E-value=0.08 Score=46.93 Aligned_cols=82 Identities=10% Similarity=0.107 Sum_probs=52.1
Q ss_pred CCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccccccCCcCcccchhhhcccCCCCeEe
Q 020840 159 PNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKCMDENNANDNVEERTISSLAGTPVSW 238 (320)
Q Consensus 159 p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~~~~~~~~~~~~~~~~~~~~~~~i~W 238 (320)
+...+|+|+|||+|.++..+.+. + ..+++.||+|+.+.+.-++++.... ...++.+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~----~----~~~v~gvD~s~~~~~~a~~~~~~~~----------------~~~~v~~ 100 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGH----V----TGQVTGLDFLSGFIDIFNRNARQSG----------------LQNRVTG 100 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTT----C----SSEEEEEESCHHHHHHHHHHHHHTT----------------CTTTEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHhc----c----CCEEEEEeCCHHHHHHHHHHHHHcC----------------CCcCcEE
Confidence 34569999999999998877643 2 2479999999998887776654310 0012332
Q ss_pred e-cccccCC--CCCCEEEEEecccccccc
Q 020840 239 H-AALEQVP--SGFPTIIVAHEFYDALPV 264 (320)
Q Consensus 239 ~-~sleelp--~~~~~~iiANE~fDALPv 264 (320)
. .++.+++ .+..-+|+++.++..+..
T Consensus 101 ~~~d~~~~~~~~~~fD~i~~~~~~~~~~~ 129 (267)
T 3kkz_A 101 IVGSMDDLPFRNEELDLIWSEGAIYNIGF 129 (267)
T ss_dssp EECCTTSCCCCTTCEEEEEESSCGGGTCH
T ss_pred EEcChhhCCCCCCCEEEEEEcCCceecCH
Confidence 2 2233343 232468888888777643
No 83
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=95.33 E-value=0.087 Score=46.70 Aligned_cols=81 Identities=19% Similarity=0.182 Sum_probs=52.6
Q ss_pred CCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccccccCCcCcccchhhhcccCCCCeEe
Q 020840 159 PNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKCMDENNANDNVEERTISSLAGTPVSW 238 (320)
Q Consensus 159 p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~~~~~~~~~~~~~~~~~~~~~~~i~W 238 (320)
+...+|+|+|||+|.++..+.+. .| ..+++.||+|+.+.+.-++++..... ..+.+
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~---~~----~~~v~~vD~s~~~~~~a~~~~~~~~~-----------------~~~~~ 91 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKN---NP----DAEITSIDISPESLEKARENTEKNGI-----------------KNVKF 91 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHH---CT----TSEEEEEESCHHHHHHHHHHHHHTTC-----------------CSEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHh---CC----CCEEEEEECCHHHHHHHHHHHHHcCC-----------------CCcEE
Confidence 44569999999999999887764 23 24799999999998877776543110 02322
Q ss_pred e-cccccCC--CCCCEEEEEeccccccc
Q 020840 239 H-AALEQVP--SGFPTIIVAHEFYDALP 263 (320)
Q Consensus 239 ~-~sleelp--~~~~~~iiANE~fDALP 263 (320)
. .++.+++ .+..-+|+++.+|..+|
T Consensus 92 ~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 119 (276)
T 3mgg_A 92 LQANIFSLPFEDSSFDHIFVCFVLEHLQ 119 (276)
T ss_dssp EECCGGGCCSCTTCEEEEEEESCGGGCS
T ss_pred EEcccccCCCCCCCeeEEEEechhhhcC
Confidence 2 1222332 23245788888887776
No 84
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=95.31 E-value=0.021 Score=54.14 Aligned_cols=63 Identities=17% Similarity=0.244 Sum_probs=39.8
Q ss_pred CCCCCeecCCChhHHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHH
Q 020840 126 GAEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQK 205 (320)
Q Consensus 126 G~~GDFiTSpEIsp~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~ 205 (320)
+..|.|+|++++.....+. +..+...+|+|+|||+|.++..+++... ...+++-||+++.+.+
T Consensus 16 ~~~g~~~TP~~l~~~~~~~-----------~~~~~~~~vLD~gcGtG~~~~~~~~~~~------~~~~i~gvDi~~~~~~ 78 (421)
T 2ih2_A 16 RSLGRVETPPEVVDFMVSL-----------AEAPRGGRVLEPACAHGPFLRAFREAHG------TAYRFVGVEIDPKALD 78 (421)
T ss_dssp -----CCCCHHHHHHHHHH-----------CCCCTTCEEEEETCTTCHHHHHHHHHHC------SCSEEEEEESCTTTCC
T ss_pred ccCceEeCCHHHHHHHHHh-----------hccCCCCEEEECCCCChHHHHHHHHHhC------CCCeEEEEECCHHHHH
Confidence 3578999987765443322 1222335999999999999988877642 1236889999987653
No 85
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=95.22 E-value=0.019 Score=56.77 Aligned_cols=50 Identities=14% Similarity=0.129 Sum_probs=36.2
Q ss_pred HHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHH
Q 020840 151 CLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQ 207 (320)
Q Consensus 151 ~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q 207 (320)
.+.+.++....-+|+|+|||+|.++..+.+.. + ..+++-||+|+.+.+.-
T Consensus 233 ~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~---g----~~~V~GVDis~~~l~~A 282 (433)
T 1u2z_A 233 DVYQQCQLKKGDTFMDLGSGVGNCVVQAALEC---G----CALSFGCEIMDDASDLT 282 (433)
T ss_dssp HHHHHTTCCTTCEEEEESCTTSHHHHHHHHHH---C----CSEEEEEECCHHHHHHH
T ss_pred HHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHC---C----CCEEEEEeCCHHHHHHH
Confidence 34444554455699999999999998877643 1 23689999999986544
No 86
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=95.21 E-value=0.052 Score=49.19 Aligned_cols=47 Identities=23% Similarity=0.181 Sum_probs=36.9
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
...+|+|+|||+|.++..+++.+. ...+++.||+|+.+.+.-++++.
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~------~~~~v~gvD~s~~~~~~a~~~~~ 82 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELK------PFEQIIGSDLSATMIKTAEVIKE 82 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSS------CCSEEEEEESCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHhCC------CCCEEEEEeCCHHHHHHHHHHHH
Confidence 346999999999999999886542 12479999999999877766654
No 87
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=95.21 E-value=0.044 Score=52.21 Aligned_cols=77 Identities=12% Similarity=0.081 Sum_probs=48.7
Q ss_pred hhcCCCCcccCCCCCCCCCCCeecCCChhHHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcc
Q 020840 110 VLTNPKAGFYINRDVFGAEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFT 189 (320)
Q Consensus 110 aLY~P~~GYY~~~~~~G~~GDFiTSpEIsp~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~ 189 (320)
.+|+.++.|+... ++.+-+.....+..+.+.++.....+|+|+|||+|.++..+.+.
T Consensus 72 ~~y~~~y~~~~~~---------------~~~~~~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~-------- 128 (416)
T 4e2x_A 72 LMFHEVYPYHSSG---------------SSVMREHFAMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEA-------- 128 (416)
T ss_dssp HHSSTTCCCCGGG---------------CHHHHHHHHHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHT--------
T ss_pred HhccCCccCcCcC---------------CHHHHHHHHHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHc--------
Confidence 4677666666542 12233333333333444455445569999999999988776542
Q ss_pred cceeEEEEecChhhHHHHHHh
Q 020840 190 ESLHIHLVECSPTLQKLQHHN 210 (320)
Q Consensus 190 ~~l~y~iVE~Sp~Lr~~Q~e~ 210 (320)
..+++-||+|+.+.+.-+++
T Consensus 129 -g~~v~gvD~s~~~~~~a~~~ 148 (416)
T 4e2x_A 129 -GVRHLGFEPSSGVAAKAREK 148 (416)
T ss_dssp -TCEEEEECCCHHHHHHHHTT
T ss_pred -CCcEEEECCCHHHHHHHHHc
Confidence 12799999999987765554
No 88
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=95.20 E-value=0.063 Score=51.05 Aligned_cols=47 Identities=11% Similarity=0.094 Sum_probs=36.9
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
...+|+|+|||+|.++..+++.... ..+++.||+|+.+.+.-++++.
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~------~~~v~gvD~s~~~l~~a~~~~~ 129 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGE------HGKVIGVDMLDNQLEVARKYVE 129 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTT------TCEEEEEECCHHHHHHHHHTHH
T ss_pred CCCEEEEecCccCHHHHHHHHHhCC------CCEEEEEECCHHHHHHHHHHHH
Confidence 3468999999999999888776521 2379999999998887776653
No 89
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=95.16 E-value=0.019 Score=52.15 Aligned_cols=46 Identities=20% Similarity=0.233 Sum_probs=34.7
Q ss_pred CCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHh
Q 020840 157 GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHN 210 (320)
Q Consensus 157 g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~ 210 (320)
+....-+|+|+|||+|.++..+++. + ..+++.||+++.+.+.-+++
T Consensus 28 ~~~~~~~VLDiG~G~G~lt~~L~~~----~----~~~v~avEid~~~~~~~~~~ 73 (249)
T 3ftd_A 28 NIEEGNTVVEVGGGTGNLTKVLLQH----P----LKKLYVIELDREMVENLKSI 73 (249)
T ss_dssp TCCTTCEEEEEESCHHHHHHHHTTS----C----CSEEEEECCCHHHHHHHTTS
T ss_pred CCCCcCEEEEEcCchHHHHHHHHHc----C----CCeEEEEECCHHHHHHHHhc
Confidence 3333458999999999998877542 1 23799999999998876654
No 90
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=95.15 E-value=0.039 Score=45.64 Aligned_cols=44 Identities=16% Similarity=0.089 Sum_probs=34.2
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.-+|+|+|||+|.++..+++. + ..+++.||+|+.+.+.-++++.
T Consensus 45 ~~~vLD~GcG~G~~~~~~~~~----~----~~~v~~vD~~~~~~~~a~~~~~ 88 (187)
T 2fhp_A 45 GGMALDLYSGSGGLAIEAVSR----G----MDKSICIEKNFAALKVIKENIA 88 (187)
T ss_dssp SCEEEETTCTTCHHHHHHHHT----T----CSEEEEEESCHHHHHHHHHHHH
T ss_pred CCCEEEeCCccCHHHHHHHHc----C----CCEEEEEECCHHHHHHHHHHHH
Confidence 358999999999998876651 1 2379999999999877666654
No 91
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=95.15 E-value=0.039 Score=51.35 Aligned_cols=62 Identities=16% Similarity=0.283 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 139 QMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 139 p~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
-.|-|+++...+. ..|.+-+|+++|||+|.++..+++. .+ ..+++.||+|+.+.+.-++.+.
T Consensus 67 ~~Y~e~l~~~~l~-----~~~~~~~VLdiG~G~G~~~~~l~~~---~~----~~~V~~VDid~~vi~~ar~~~~ 128 (294)
T 3adn_A 67 FIYHEMMTHVPLL-----AHGHAKHVLIIGGGDGAMLREVTRH---KN----VESITMVEIDAGVVSFCRQYLP 128 (294)
T ss_dssp HHHHHHHHHHHHH-----HSTTCCEEEEESCTTCHHHHHHHTC---TT----CCEEEEECSCTTHHHHHHHHCH
T ss_pred hHHHHHHHHHHHh-----cCCCCCEEEEEeCChhHHHHHHHhC---CC----CCEEEEEECCHHHHHHHHHhhh
Confidence 3567777654331 1234469999999999999888753 11 2479999999999998887764
No 92
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=95.11 E-value=0.089 Score=47.54 Aligned_cols=94 Identities=13% Similarity=-0.035 Sum_probs=52.4
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcccc--ccCCcCcccchhhhcccCCCCeEe
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKCM--DENNANDNVEERTISSLAGTPVSW 238 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~~--~~~~~~~~~~~~~~~~~~~~~i~W 238 (320)
..+|+|+|||+|.++..+.+. ..+++-||+|+.+.+.-+++.... .+...... .... -...+..+.|
T Consensus 69 ~~~vLD~GCG~G~~~~~La~~---------G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~i~~ 137 (252)
T 2gb4_A 69 GLRVFFPLCGKAIEMKWFADR---------GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIA-GAKV-FKSSSGSISL 137 (252)
T ss_dssp SCEEEETTCTTCTHHHHHHHT---------TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTST-TCEE-EEETTSSEEE
T ss_pred CCeEEEeCCCCcHHHHHHHHC---------CCeEEEEECCHHHHHHHHHhcccccccccccccc-cccc-cccCCCceEE
Confidence 458999999999998766542 126999999999987655543210 00000000 0000 0000124554
Q ss_pred e-cccccCCC---CCCEEEEEecccccccce
Q 020840 239 H-AALEQVPS---GFPTIIVAHEFYDALPVH 265 (320)
Q Consensus 239 ~-~sleelp~---~~~~~iiANE~fDALPv~ 265 (320)
. .++.+++. +..-+|+++-+|.++|..
T Consensus 138 ~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~ 168 (252)
T 2gb4_A 138 YCCSIFDLPRANIGKFDRIWDRGALVAINPG 168 (252)
T ss_dssp EESCTTTGGGGCCCCEEEEEESSSTTTSCGG
T ss_pred EECccccCCcccCCCEEEEEEhhhhhhCCHH
Confidence 3 23344432 334678899999999864
No 93
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=95.11 E-value=0.048 Score=45.45 Aligned_cols=43 Identities=12% Similarity=0.027 Sum_probs=34.2
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
+-+|+|+|||+|.++..+.+. ..+++.||+|+.+.+.-++++.
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~---------~~~v~~vD~s~~~~~~a~~~~~ 75 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAAN---------GYDVDAWDKNAMSIANVERIKS 75 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHT---------TCEEEEEESCHHHHHHHHHHHH
T ss_pred CCeEEEEcCCCCHHHHHHHHC---------CCeEEEEECCHHHHHHHHHHHH
Confidence 359999999999998876653 1379999999998887766554
No 94
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=95.10 E-value=0.052 Score=48.60 Aligned_cols=41 Identities=15% Similarity=0.211 Sum_probs=32.6
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L 211 (320)
.+|+|+|||+|.++..+++. ..+++-||+|+.+.+.-++++
T Consensus 59 ~~vLDiGcG~G~~~~~l~~~---------~~~v~gvD~s~~~l~~a~~~~ 99 (293)
T 3thr_A 59 HRVLDVACGTGVDSIMLVEE---------GFSVTSVDASDKMLKYALKER 99 (293)
T ss_dssp CEEEETTCTTSHHHHHHHHT---------TCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEecCCCCHHHHHHHHC---------CCeEEEEECCHHHHHHHHHhh
Confidence 58999999999998887653 127999999999877655543
No 95
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=95.08 E-value=0.049 Score=47.67 Aligned_cols=44 Identities=25% Similarity=0.355 Sum_probs=35.9
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
..+|+|+|||+|.++..+.+... .+++.||+|+.+.+.-++++.
T Consensus 92 ~~~vLdiG~G~G~~~~~la~~~~--------~~v~~vD~~~~~~~~a~~~~~ 135 (235)
T 1jg1_A 92 GMNILEVGTGSGWNAALISEIVK--------TDVYTIERIPELVEFAKRNLE 135 (235)
T ss_dssp TCCEEEECCTTSHHHHHHHHHHC--------SCEEEEESCHHHHHHHHHHHH
T ss_pred CCEEEEEeCCcCHHHHHHHHHhC--------CEEEEEeCCHHHHHHHHHHHH
Confidence 35899999999999998877542 269999999999887777664
No 96
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=95.07 E-value=0.03 Score=49.37 Aligned_cols=44 Identities=7% Similarity=0.176 Sum_probs=34.2
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
...+|+|+|||+|.++..+.+.. -+++.||+|+.+.+.-++++.
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~---------~~v~gvD~s~~~l~~a~~~~~ 80 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFV---------KKVVAFDLTEDILKVARAFIE 80 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGS---------SEEEEEESCHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCHHHHHHHHhC---------CEEEEEeCCHHHHHHHHHHHH
Confidence 34699999999999888765421 179999999999887766653
No 97
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=95.05 E-value=0.065 Score=47.31 Aligned_cols=46 Identities=11% Similarity=0.227 Sum_probs=36.8
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~ 213 (320)
.+|+|+|||+|..+..+++.+. ...+++.||+|+.+.+.-++++..
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~------~~~~v~~vD~~~~~~~~a~~~~~~ 103 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLA------DNTTLTCIDPESEHQRQAKALFRE 103 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSC------TTSEEEEECSCHHHHHHHHHHHHH
T ss_pred CCEEEEcCCchHHHHHHHHhCC------CCCEEEEEECCHHHHHHHHHHHHH
Confidence 4899999999999998887642 124799999999998877776643
No 98
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=95.03 E-value=0.06 Score=49.71 Aligned_cols=71 Identities=17% Similarity=0.262 Sum_probs=46.5
Q ss_pred CCChhHHHHHHHHHHHHHHHHH----cCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHH
Q 020840 134 SPEVSQMFGEMVGVWAMCLWEQ----MGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHH 209 (320)
Q Consensus 134 SpEIsp~FGe~IA~~i~~~w~~----~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e 209 (320)
.|+....|...++.+....... ...+...+|+|+|||+|.++..+++.. |. ++++.+|+ |.+.+.-++
T Consensus 139 ~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~---p~----~~~~~~D~-~~~~~~a~~ 210 (332)
T 3i53_A 139 DPVLSASFDTLMSHHLELDYTGIAAKYDWAALGHVVDVGGGSGGLLSALLTAH---ED----LSGTVLDL-QGPASAAHR 210 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTGGGSSCCGGGSEEEEETCTTSHHHHHHHHHC---TT----CEEEEEEC-HHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhHHhhHHHHHHhCCCCCCCEEEEeCCChhHHHHHHHHHC---CC----CeEEEecC-HHHHHHHHH
Confidence 4566666766665543322211 222345699999999999999887653 33 47899999 877766665
Q ss_pred hcc
Q 020840 210 NLK 212 (320)
Q Consensus 210 ~L~ 212 (320)
++.
T Consensus 211 ~~~ 213 (332)
T 3i53_A 211 RFL 213 (332)
T ss_dssp HHH
T ss_pred hhh
Confidence 554
No 99
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=95.03 E-value=0.03 Score=49.03 Aligned_cols=44 Identities=11% Similarity=0.110 Sum_probs=33.4
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
..+|+|+|||+|.++..+.+ .+ ..+++.||+|+.+.+.-+++..
T Consensus 61 ~~~vLDiGcGtG~~~~~l~~----~~----~~~v~gvD~s~~~l~~a~~~~~ 104 (236)
T 1zx0_A 61 GGRVLEVGFGMAIAASKVQE----AP----IDEHWIIECNDGVFQRLRDWAP 104 (236)
T ss_dssp CEEEEEECCTTSHHHHHHHT----SC----EEEEEEEECCHHHHHHHHHHGG
T ss_pred CCeEEEEeccCCHHHHHHHh----cC----CCeEEEEcCCHHHHHHHHHHHH
Confidence 36899999999998877632 11 1268999999999887776654
No 100
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=95.02 E-value=0.055 Score=49.49 Aligned_cols=62 Identities=19% Similarity=0.325 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 139 QMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 139 p~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
..|-|+|+...+.. .|.+.+|+++|+|.|.++..+++. .+ ..+++.||++|.+.+.-++.+.
T Consensus 59 ~~y~e~l~~~~l~~-----~~~~~~VLdiG~G~G~~~~~l~~~---~~----~~~v~~vEid~~~v~~ar~~~~ 120 (275)
T 1iy9_A 59 FVYHEMVAHVPLFT-----HPNPEHVLVVGGGDGGVIREILKH---PS----VKKATLVDIDGKVIEYSKKFLP 120 (275)
T ss_dssp HHHHHHHHHHHHHH-----SSSCCEEEEESCTTCHHHHHHTTC---TT----CSEEEEEESCHHHHHHHHHHCH
T ss_pred hHHHHHHHHHHHhh-----CCCCCEEEEECCchHHHHHHHHhC---CC----CceEEEEECCHHHHHHHHHHhH
Confidence 35667776543211 244569999999999998877642 12 2479999999999888777663
No 101
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=95.00 E-value=0.056 Score=46.10 Aligned_cols=43 Identities=19% Similarity=0.075 Sum_probs=33.4
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
..+|+|+|||+|.++..+.+. .+ +++.||+|+.+.+.-++++.
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~---~~------~v~~vD~s~~~~~~a~~~~~ 81 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDY---GF------EVVGVDISEDMIRKAREYAK 81 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHT---TC------EEEEEESCHHHHHHHHHHHH
T ss_pred CCeEEEEeccCCHHHHHHHHc---CC------EEEEEECCHHHHHHHHHHHH
Confidence 469999999999988665542 12 79999999999887666653
No 102
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=94.99 E-value=0.065 Score=49.64 Aligned_cols=60 Identities=18% Similarity=0.389 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhc
Q 020840 140 MFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (320)
Q Consensus 140 ~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L 211 (320)
.|-++++...+ ...+.+.+|+|+|||.|.++..+++. . ...+++.||+|+.+.+..++.+
T Consensus 80 ~y~e~l~~~~l-----~~~~~~~~VLdiG~G~G~~~~~l~~~---~----~~~~v~~vDid~~~i~~a~~~~ 139 (304)
T 3bwc_A 80 VYHEVLGHTSL-----CSHPKPERVLIIGGGDGGVLREVLRH---G----TVEHCDLVDIDGEVMEQSKQHF 139 (304)
T ss_dssp HHHHHHHHHHH-----TTSSSCCEEEEEECTTSHHHHHHHTC---T----TCCEEEEEESCHHHHHHHHHHC
T ss_pred HHHHHHhhhhh-----hcCCCCCeEEEEcCCCCHHHHHHHhC---C----CCCEEEEEECCHHHHHHHHHHh
Confidence 56666654322 22344569999999999999888753 1 1247999999999998888776
No 103
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=94.97 E-value=0.03 Score=47.52 Aligned_cols=40 Identities=23% Similarity=0.280 Sum_probs=31.8
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHh
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHN 210 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~ 210 (320)
.+|+|+|||+|.++..+++. ..+++.||+|+.+.+.-+++
T Consensus 54 ~~vLdiG~G~G~~~~~l~~~---------~~~v~~vD~s~~~~~~a~~~ 93 (227)
T 3e8s_A 54 ERVLDLGCGEGWLLRALADR---------GIEAVGVDGDRTLVDAARAA 93 (227)
T ss_dssp SEEEEETCTTCHHHHHHHTT---------TCEEEEEESCHHHHHHHHHT
T ss_pred CEEEEeCCCCCHHHHHHHHC---------CCEEEEEcCCHHHHHHHHHh
Confidence 69999999999988776543 23799999999987766554
No 104
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=94.95 E-value=0.085 Score=44.74 Aligned_cols=44 Identities=14% Similarity=0.229 Sum_probs=33.8
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
..+|+|+|||+|.++..+.+ .+ ..+++.||+|+.+.+.-++++.
T Consensus 61 ~~~vLDiG~G~G~~~~~l~~----~~----~~~v~~vD~s~~~~~~a~~~~~ 104 (205)
T 3grz_A 61 PLTVADVGTGSGILAIAAHK----LG----AKSVLATDISDESMTAAEENAA 104 (205)
T ss_dssp CCEEEEETCTTSHHHHHHHH----TT----CSEEEEEESCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHH----CC----CCEEEEEECCHHHHHHHHHHHH
Confidence 35899999999998887543 22 2379999999999877666654
No 105
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=94.95 E-value=0.035 Score=48.36 Aligned_cols=44 Identities=14% Similarity=0.258 Sum_probs=33.8
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
-.|+|+|||+|.++..+.+. .|+ .+++-||+|+.+.+.-++++.
T Consensus 40 ~~vLDiGcG~G~~~~~la~~---~p~----~~v~giD~s~~~l~~a~~~~~ 83 (213)
T 2fca_A 40 PIHIEVGTGKGQFISGMAKQ---NPD----INYIGIELFKSVIVTAVQKVK 83 (213)
T ss_dssp CEEEEECCTTSHHHHHHHHH---CTT----SEEEEECSCHHHHHHHHHHHH
T ss_pred ceEEEEecCCCHHHHHHHHH---CCC----CCEEEEEechHHHHHHHHHHH
Confidence 48999999999998877553 333 479999999998776655543
No 106
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=94.91 E-value=0.086 Score=43.37 Aligned_cols=43 Identities=14% Similarity=0.294 Sum_probs=34.2
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhc
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L 211 (320)
...+|+|+|||.|.++..+.+. ..+++.||+|+.+.+.-++++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~---------~~~v~~~D~~~~~~~~a~~~~ 88 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQ---------GHDVLGTDLDPILIDYAKQDF 88 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHT---------TCEEEEEESCHHHHHHHHHHC
T ss_pred CCCeEEEECCCCCHHHHHHHHC---------CCcEEEEcCCHHHHHHHHHhC
Confidence 3459999999999998877653 137999999999887776655
No 107
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=94.91 E-value=0.061 Score=48.28 Aligned_cols=46 Identities=9% Similarity=0.044 Sum_probs=36.8
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~ 213 (320)
+-+|+|+|||.|.+|.-+... .| ..+|+.+|+|+.+.+.-++++..
T Consensus 50 ~~~VLDlGCG~GplAl~l~~~---~p----~a~~~A~Di~~~~leiar~~~~~ 95 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQWNE---NE----KIIYHAYDIDRAEIAFLSSIIGK 95 (200)
T ss_dssp CSEEEEETCTTHHHHHHHHCS---SC----CCEEEEECSCHHHHHHHHHHHHH
T ss_pred CCeEEEecCCCCHHHHHHHhc---CC----CCEEEEEeCCHHHHHHHHHHHHh
Confidence 459999999999999876432 23 23899999999999988887753
No 108
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=94.90 E-value=0.074 Score=46.70 Aligned_cols=51 Identities=25% Similarity=0.225 Sum_probs=38.9
Q ss_pred cCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 156 MGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 156 ~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
++.....+|+|+|||+|.++..+++.+. ...+++.||+|+.+.+.-++++.
T Consensus 89 ~~~~~~~~vldiG~G~G~~~~~l~~~~~------~~~~v~~~D~~~~~~~~a~~~~~ 139 (255)
T 3mb5_A 89 AGISPGDFIVEAGVGSGALTLFLANIVG------PEGRVVSYEIREDFAKLAWENIK 139 (255)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHHHC------TTSEEEEECSCHHHHHHHHHHHH
T ss_pred hCCCCCCEEEEecCCchHHHHHHHHHhC------CCeEEEEEecCHHHHHHHHHHHH
Confidence 3443446899999999999999887642 12479999999998887777664
No 109
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=94.90 E-value=0.04 Score=47.45 Aligned_cols=44 Identities=11% Similarity=0.246 Sum_probs=34.4
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
-.|+|+|||+|.++..+.+. .| ..+++-||+|+.+.+.-++++.
T Consensus 43 ~~vLDiGcG~G~~~~~la~~---~p----~~~v~gvD~s~~~l~~a~~~~~ 86 (214)
T 1yzh_A 43 PIHVEVGSGKGAFVSGMAKQ---NP----DINYIGIDIQKSVLSYALDKVL 86 (214)
T ss_dssp CEEEEESCTTSHHHHHHHHH---CT----TSEEEEEESCHHHHHHHHHHHH
T ss_pred CeEEEEccCcCHHHHHHHHH---CC----CCCEEEEEcCHHHHHHHHHHHH
Confidence 48999999999998877654 23 2479999999999876666553
No 110
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=94.88 E-value=0.059 Score=46.87 Aligned_cols=62 Identities=21% Similarity=0.274 Sum_probs=43.1
Q ss_pred eecCCChhHHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHh
Q 020840 131 FITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHN 210 (320)
Q Consensus 131 FiTSpEIsp~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~ 210 (320)
.+..|+...++...+...+ +...+|+|+|||+|.++..+.+. ..+++-||+|+.+.+.-+++
T Consensus 28 ~~~~~~~~~l~~~~~~~~~---------~~~~~vLDiGcG~G~~~~~l~~~---------~~~v~~vD~s~~~~~~a~~~ 89 (226)
T 3m33_A 28 VLSGPDPELTFDLWLSRLL---------TPQTRVLEAGCGHGPDAARFGPQ---------AARWAAYDFSPELLKLARAN 89 (226)
T ss_dssp EESSSCTTHHHHHHHHHHC---------CTTCEEEEESCTTSHHHHHHGGG---------SSEEEEEESCHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHhcC---------CCCCeEEEeCCCCCHHHHHHHHc---------CCEEEEEECCHHHHHHHHHh
Confidence 3455666666666554321 22358999999999988776543 23799999999988766655
No 111
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=94.88 E-value=0.068 Score=43.38 Aligned_cols=42 Identities=19% Similarity=0.185 Sum_probs=33.2
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
-+|+|+|||+|.++..+.+. .+ .++-||+|+.+.+.-++++.
T Consensus 43 ~~vLD~GcG~G~~~~~l~~~---~~------~v~~vD~~~~~~~~a~~~~~ 84 (171)
T 1ws6_A 43 GRFLDPFAGSGAVGLEAASE---GW------EAVLVEKDPEAVRLLKENVR 84 (171)
T ss_dssp CEEEEETCSSCHHHHHHHHT---TC------EEEEECCCHHHHHHHHHHHH
T ss_pred CeEEEeCCCcCHHHHHHHHC---CC------eEEEEeCCHHHHHHHHHHHH
Confidence 48999999999998877653 11 38999999999887776654
No 112
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=94.86 E-value=0.049 Score=54.16 Aligned_cols=65 Identities=17% Similarity=0.206 Sum_probs=48.6
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHH
Q 020840 138 SQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHH 209 (320)
Q Consensus 138 sp~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e 209 (320)
+..|||+....+..+...++....-.|+++|||+|.++..+... .+ .-+++-||+|+.+.+.-++
T Consensus 151 ~~vYGEt~~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~---~g----~~kVvGIDiS~~~lelAr~ 215 (438)
T 3uwp_A 151 PEVYGETSFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAA---TN----CKHHYGVEKADIPAKYAET 215 (438)
T ss_dssp GGGGGGTHHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHH---CC----CSEEEEEECCHHHHHHHHH
T ss_pred CcccCCCCHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHH---CC----CCEEEEEeCCHHHHHHHHH
Confidence 45788888888888888777655669999999999998877543 12 1258999999977654443
No 113
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=94.81 E-value=0.058 Score=46.76 Aligned_cols=45 Identities=18% Similarity=0.207 Sum_probs=35.4
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
-+|+|+|||+|.++..+.+.+. ...+++.||+||.+.+.-++++.
T Consensus 60 ~~vLdiG~G~G~~~~~la~~~~------~~~~v~~vD~~~~~~~~a~~~~~ 104 (221)
T 3u81_A 60 SLVLELGAYCGYSAVRMARLLQ------PGARLLTMEINPDCAAITQQMLN 104 (221)
T ss_dssp SEEEEECCTTSHHHHHHHTTSC------TTCEEEEEESCHHHHHHHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHhCC------CCCEEEEEeCChHHHHHHHHHHH
Confidence 4899999999999988776432 13479999999999887666554
No 114
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=94.79 E-value=0.027 Score=51.42 Aligned_cols=48 Identities=6% Similarity=-0.044 Sum_probs=35.6
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccc
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~ 213 (320)
...+|+|+|||+|.++..+... ..| ..+++.||+|+.+.+.-++++..
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~--~~~----~~~v~gvD~s~~~~~~a~~~~~~ 165 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYS--ACP----GVQLVGIDYDPEALDGATRLAAG 165 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCT--TCT----TCEEEEEESCHHHHHHHHHHHTT
T ss_pred CCCEEEEecCCCCHHHHHHHHh--cCC----CCeEEEEECCHHHHHHHHHHHHh
Confidence 3468999999999987765311 122 35799999999998887777653
No 115
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=94.78 E-value=0.074 Score=43.95 Aligned_cols=44 Identities=20% Similarity=0.200 Sum_probs=34.9
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
..+|+|+|||+|.++..+++. + ..+++.||+|+.+.+.-++++.
T Consensus 32 ~~~vLDlGcG~G~~~~~l~~~----~----~~~v~~vD~~~~~~~~a~~~~~ 75 (177)
T 2esr_A 32 GGRVLDLFAGSGGLAIEAVSR----G----MSAAVLVEKNRKAQAIIQDNII 75 (177)
T ss_dssp SCEEEEETCTTCHHHHHHHHT----T----CCEEEEECCCHHHHHHHHHHHH
T ss_pred CCeEEEeCCCCCHHHHHHHHc----C----CCEEEEEECCHHHHHHHHHHHH
Confidence 358999999999998877642 2 2379999999999887777664
No 116
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=94.76 E-value=0.077 Score=46.18 Aligned_cols=42 Identities=14% Similarity=0.150 Sum_probs=34.1
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
-+|+|+|||+|.++..+.+. ..+++-||+|+.+.+.-++++.
T Consensus 80 ~~vLD~gcG~G~~~~~la~~---------~~~v~~vD~s~~~~~~a~~~~~ 121 (241)
T 3gdh_A 80 DVVVDAFCGVGGNTIQFALT---------GMRVIAIDIDPVKIALARNNAE 121 (241)
T ss_dssp SEEEETTCTTSHHHHHHHHT---------TCEEEEEESCHHHHHHHHHHHH
T ss_pred CEEEECccccCHHHHHHHHc---------CCEEEEEECCHHHHHHHHHHHH
Confidence 48999999999999888753 1479999999998887666554
No 117
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=94.75 E-value=0.065 Score=46.38 Aligned_cols=47 Identities=13% Similarity=0.120 Sum_probs=35.9
Q ss_pred CCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 157 GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 157 g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
+....-+|+|+|||+|.++..+.+. ..+++.||+|+.+.+.-++++.
T Consensus 52 ~~~~~~~vLDlGcG~G~~~~~la~~---------~~~v~~vD~s~~~~~~a~~~~~ 98 (204)
T 3njr_A 52 APRRGELLWDIGGGSGSVSVEWCLA---------GGRAITIEPRADRIENIQKNID 98 (204)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHT---------TCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHc---------CCEEEEEeCCHHHHHHHHHHHH
Confidence 3334468999999999998877653 2369999999999877666553
No 118
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=94.74 E-value=0.1 Score=45.76 Aligned_cols=45 Identities=16% Similarity=0.139 Sum_probs=36.1
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.+|+|+|||+|.++..+++.+. ...+++.||+|+.+.+.-++++.
T Consensus 62 ~~VLdiG~G~G~~~~~la~~~~------~~~~v~~vD~~~~~~~~a~~~~~ 106 (239)
T 2hnk_A 62 KRIIEIGTFTGYSSLCFASALP------EDGKILCCDVSEEWTNVARKYWK 106 (239)
T ss_dssp SEEEEECCTTCHHHHHHHHHSC------TTCEEEEEESCHHHHHHHHHHHH
T ss_pred CEEEEEeCCCCHHHHHHHHhCC------CCCEEEEEECCHHHHHHHHHHHH
Confidence 4899999999999998877542 12479999999999887777664
No 119
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=94.72 E-value=0.035 Score=48.55 Aligned_cols=45 Identities=16% Similarity=0.181 Sum_probs=35.4
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~ 213 (320)
..+|+|+|||+|.++..+++.. ..+++.||+|+.+.+.-++++..
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~--------~~~v~~vD~s~~~~~~a~~~~~~ 124 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPL--------FREVDMVDITEDFLVQAKTYLGE 124 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTT--------CSEEEEEESCHHHHHHHHHHTGG
T ss_pred CCEEEEECCCCCHHHHHHHHhc--------CCEEEEEeCCHHHHHHHHHHhhh
Confidence 4699999999999888765431 23799999999998887776643
No 120
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=94.71 E-value=0.057 Score=46.32 Aligned_cols=40 Identities=13% Similarity=0.135 Sum_probs=31.3
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHH
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKL 206 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~ 206 (320)
...+|+|+|||+|.++..+.+. .| ..+++-||+|+.+.+.
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~---~p----~~~v~gvD~s~~~l~~ 66 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQ---NP----SRLVVALDADKSRMEK 66 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHH---CT----TEEEEEEESCGGGGHH
T ss_pred CCCEEEEecCCCCHHHHHHHHH---CC----CCEEEEEECCHHHHHH
Confidence 3468999999999999888763 22 2479999999996553
No 121
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=94.71 E-value=0.078 Score=45.69 Aligned_cols=45 Identities=13% Similarity=0.065 Sum_probs=35.9
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.+|+|+|||.|.++..+++.+ | ...+++.||+|+.+.+.-++++.
T Consensus 71 ~~vLdiG~G~G~~~~~la~~~---~---~~~~v~~vD~~~~~~~~a~~~~~ 115 (229)
T 2avd_A 71 KKALDLGTFTGYSALALALAL---P---ADGRVVTCEVDAQPPELGRPLWR 115 (229)
T ss_dssp CEEEEECCTTSHHHHHHHTTS---C---TTCEEEEEESCSHHHHHHHHHHH
T ss_pred CEEEEEcCCccHHHHHHHHhC---C---CCCEEEEEECCHHHHHHHHHHHH
Confidence 489999999999988876543 2 13479999999999888777764
No 122
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=94.69 E-value=0.078 Score=47.25 Aligned_cols=50 Identities=20% Similarity=0.242 Sum_probs=38.2
Q ss_pred CCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 157 GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 157 g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
+.....+|+|+|||+|.++..+++.+. | ..+++.||+|+.+.+.-++++.
T Consensus 96 ~~~~~~~vLdiG~G~G~~~~~l~~~~~--~----~~~v~~vD~~~~~~~~a~~~~~ 145 (280)
T 1i9g_A 96 DIFPGARVLEAGAGSGALTLSLLRAVG--P----AGQVISYEQRADHAEHARRNVS 145 (280)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHC--T----TSEEEEECSCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEEcccccHHHHHHHHHhC--C----CCEEEEEeCCHHHHHHHHHHHH
Confidence 333345899999999999998887642 1 2379999999999887776654
No 123
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=94.68 E-value=0.1 Score=46.12 Aligned_cols=44 Identities=11% Similarity=0.179 Sum_probs=34.7
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L 211 (320)
..+|+|+|||+|.++..+++.+ | ..+++.||+|+.+.+.-+++.
T Consensus 86 ~~~vLdiG~G~G~~~~~l~~~~---~----~~~v~~vD~s~~~~~~a~~~~ 129 (269)
T 1p91_A 86 ATAVLDIGCGEGYYTHAFADAL---P----EITTFGLDVSKVAIKAAAKRY 129 (269)
T ss_dssp CCEEEEETCTTSTTHHHHHHTC---T----TSEEEEEESCHHHHHHHHHHC
T ss_pred CCEEEEECCCCCHHHHHHHHhC---C----CCeEEEEeCCHHHHHHHHHhC
Confidence 3589999999999998877643 2 237999999999887766654
No 124
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=94.66 E-value=0.089 Score=45.98 Aligned_cols=50 Identities=20% Similarity=0.266 Sum_probs=38.2
Q ss_pred CCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 157 GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 157 g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
+.....+|+|+|||+|.++..+++.+. | ..+++.||+|+.+.+.-++++.
T Consensus 93 ~~~~~~~vLdiG~G~G~~~~~l~~~~~--~----~~~v~~~D~~~~~~~~a~~~~~ 142 (258)
T 2pwy_A 93 DLAPGMRVLEAGTGSGGLTLFLARAVG--E----KGLVESYEARPHHLAQAERNVR 142 (258)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHC--T----TSEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHhC--C----CCEEEEEeCCHHHHHHHHHHHH
Confidence 333445899999999999998887642 1 2379999999999887777654
No 125
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=94.66 E-value=0.097 Score=45.93 Aligned_cols=44 Identities=20% Similarity=0.325 Sum_probs=35.2
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.+|+|+|||+|.++..+++. .| ..+++.||+|+.+.+.-++++.
T Consensus 73 ~~vLDiG~G~G~~~~~la~~---~~----~~~v~~vD~~~~~~~~a~~~~~ 116 (232)
T 3ntv_A 73 KNILEIGTAIGYSSMQFASI---SD----DIHVTTIERNETMIQYAKQNLA 116 (232)
T ss_dssp CEEEEECCSSSHHHHHHHTT---CT----TCEEEEEECCHHHHHHHHHHHH
T ss_pred CEEEEEeCchhHHHHHHHHh---CC----CCEEEEEECCHHHHHHHHHHHH
Confidence 48999999999998877652 22 3479999999999887777664
No 126
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=94.64 E-value=0.071 Score=49.27 Aligned_cols=61 Identities=25% Similarity=0.378 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 140 MFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 140 ~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.|-|+++...... .+.+.+|+|+|||+|.++..+++.. + ..+++.||+||.+.+.-++.+.
T Consensus 75 ~y~e~l~~~~l~~-----~~~~~~VLdiG~G~G~~~~~l~~~~---~----~~~v~~vDid~~~~~~a~~~~~ 135 (296)
T 1inl_A 75 MYHEMLAHVPMFL-----HPNPKKVLIIGGGDGGTLREVLKHD---S----VEKAILCEVDGLVIEAARKYLK 135 (296)
T ss_dssp HHHHHHHHHHHHH-----SSSCCEEEEEECTTCHHHHHHTTST---T----CSEEEEEESCHHHHHHHHHHCH
T ss_pred HHHHHHhHHHHhc-----CCCCCEEEEEcCCcCHHHHHHHhcC---C----CCEEEEEECCHHHHHHHHHHhH
Confidence 5667776543211 2344699999999999988876531 2 2479999999999888777663
No 127
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=94.60 E-value=0.083 Score=49.25 Aligned_cols=62 Identities=16% Similarity=0.291 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 139 QMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 139 p~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
-.|-++++...+. ..+.+.+|+|+|||.|.++..+++.. ...+++.||++|.+.+.-++.+.
T Consensus 61 ~~Y~e~l~~~~l~-----~~~~~~~VLdiG~G~G~~~~~l~~~~-------~~~~v~~vDid~~~i~~ar~~~~ 122 (314)
T 1uir_A 61 YIYHETLVHPAML-----THPEPKRVLIVGGGEGATLREVLKHP-------TVEKAVMVDIDGELVEVAKRHMP 122 (314)
T ss_dssp HHHHHHHHHHHHH-----HSSCCCEEEEEECTTSHHHHHHTTST-------TCCEEEEEESCHHHHHHHHHHCH
T ss_pred hHHHHHHHHHHHh-----cCCCCCeEEEEcCCcCHHHHHHHhcC-------CCCEEEEEECCHHHHHHHHHHhH
Confidence 3566776643221 12344699999999999988776531 12479999999999888777664
No 128
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=94.57 E-value=0.098 Score=44.73 Aligned_cols=45 Identities=16% Similarity=0.070 Sum_probs=35.5
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.+|+|+|||+|..+..+++.+ |. ..+++.||+|+.+.+.-++++.
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~---~~---~~~v~~vD~~~~~~~~a~~~~~ 102 (210)
T 3c3p_A 58 QLVVVPGDGLGCASWWFARAI---SI---SSRVVMIDPDRDNVEHARRMLH 102 (210)
T ss_dssp SEEEEESCGGGHHHHHHHTTS---CT---TCEEEEEESCHHHHHHHHHHHH
T ss_pred CEEEEEcCCccHHHHHHHHhC---CC---CCEEEEEECCHHHHHHHHHHHH
Confidence 489999999999988876543 21 3479999999999887777664
No 129
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=94.54 E-value=0.043 Score=48.06 Aligned_cols=48 Identities=8% Similarity=0.092 Sum_probs=36.1
Q ss_pred cCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 156 MGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 156 ~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
++.....+|+|+|||+|.++..+.+. . .+++.||+|+.+.+.-++++.
T Consensus 17 ~~~~~~~~vLDiGcG~G~~~~~l~~~---~------~~v~~vD~s~~~~~~a~~~~~ 64 (239)
T 1xxl_A 17 AECRAEHRVLDIGAGAGHTALAFSPY---V------QECIGVDATKEMVEVASSFAQ 64 (239)
T ss_dssp HTCCTTCEEEEESCTTSHHHHHHGGG---S------SEEEEEESCHHHHHHHHHHHH
T ss_pred hCcCCCCEEEEEccCcCHHHHHHHHh---C------CEEEEEECCHHHHHHHHHHHH
Confidence 34445569999999999988876532 1 169999999999887766654
No 130
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=94.53 E-value=0.068 Score=49.60 Aligned_cols=47 Identities=19% Similarity=0.229 Sum_probs=36.5
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
...+|+|+|||+|.++..+++.+. ...+++-||+||.+.+.-++++.
T Consensus 105 ~g~~VLDiG~G~G~~~~~la~~~g------~~~~v~~vD~~~~~~~~a~~~~~ 151 (336)
T 2b25_A 105 PGDTVLEAGSGSGGMSLFLSKAVG------SQGRVISFEVRKDHHDLAKKNYK 151 (336)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHC------TTCEEEEEESSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcCHHHHHHHHHhC------CCceEEEEeCCHHHHHHHHHHHH
Confidence 345899999999999998887541 12368999999998877666654
No 131
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=94.51 E-value=0.085 Score=49.12 Aligned_cols=63 Identities=14% Similarity=0.284 Sum_probs=44.4
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 138 SQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 138 sp~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
...|-++|+...+ ...+.+.+|+|+|||+|.++..+++. .+ ..+++.||+++.+.+.-++.+.
T Consensus 78 e~~y~e~l~~~~l-----~~~~~~~~VLdiG~G~G~~~~~l~~~---~~----~~~v~~vDid~~~i~~ar~~~~ 140 (304)
T 2o07_A 78 EFSYQEMIANLPL-----CSHPNPRKVLIIGGGDGGVLREVVKH---PS----VESVVQCEIDEDVIQVSKKFLP 140 (304)
T ss_dssp HHHHHHHHHHHHH-----TTSSSCCEEEEEECTTSHHHHHHTTC---TT----CCEEEEEESCHHHHHHHHHHCH
T ss_pred chHHHHHHHHHHH-----hhCCCCCEEEEECCCchHHHHHHHHc---CC----CCEEEEEECCHHHHHHHHHHhH
Confidence 4566677654221 22344569999999999998877643 12 2479999999999888777664
No 132
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=94.49 E-value=0.09 Score=48.21 Aligned_cols=63 Identities=17% Similarity=0.214 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccc
Q 020840 139 QMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (320)
Q Consensus 139 p~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~ 213 (320)
..|-++++.-. ....+.+.+|+|+|||.|.++..+++. .| ..+++.||++|.+.+.-++.+..
T Consensus 62 ~~Y~e~l~~~~-----l~~~~~~~~VLdiG~G~G~~~~~l~~~---~~----~~~v~~vDid~~~i~~a~~~~~~ 124 (283)
T 2i7c_A 62 FAYHEMMTHVP-----MTVSKEPKNVLVVGGGDGGIIRELCKY---KS----VENIDICEIDETVIEVSKIYFKN 124 (283)
T ss_dssp HHHHHHHHHHH-----HTTSSSCCEEEEEECTTSHHHHHHTTC---TT----CCEEEEEESCHHHHHHHHHHCTT
T ss_pred hhHHHHHHHHH-----HhcCCCCCeEEEEeCCcCHHHHHHHHc---CC----CCEEEEEECCHHHHHHHHHHhHH
Confidence 34566654321 123345569999999999998887642 11 24799999999999988887753
No 133
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=94.49 E-value=0.14 Score=47.55 Aligned_cols=70 Identities=17% Similarity=0.247 Sum_probs=44.0
Q ss_pred CChhHHHHHHHHHH----HHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHh
Q 020840 135 PEVSQMFGEMVGVW----AMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHN 210 (320)
Q Consensus 135 pEIsp~FGe~IA~~----i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~ 210 (320)
|+....|...+... +..+.+..+.....+|+|+|||+|.++..+++.. | .++++.+|+ |.+.+.-+++
T Consensus 154 p~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~---~----~~~~~~~D~-~~~~~~a~~~ 225 (360)
T 1tw3_A 154 PDLRASFDSLLACDQDVAFDAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRA---P----HVSATVLEM-AGTVDTARSY 225 (360)
T ss_dssp HHHHHHHHHHHTTTTTTTTHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHC---T----TCEEEEEEC-TTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhHHHHHHhCCCccCcEEEEeCCcCcHHHHHHHHhC---C----CCEEEEecC-HHHHHHHHHH
Confidence 44555565554311 1122333444445699999999999998887652 3 347899999 7776665555
Q ss_pred cc
Q 020840 211 LK 212 (320)
Q Consensus 211 L~ 212 (320)
+.
T Consensus 226 ~~ 227 (360)
T 1tw3_A 226 LK 227 (360)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 134
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=94.48 E-value=0.07 Score=47.00 Aligned_cols=43 Identities=12% Similarity=0.054 Sum_probs=32.9
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L 211 (320)
-.|+|+|||+|.++..+.+. .|+ ..++-||+|+.+.+.-++++
T Consensus 36 ~~vLDiGcG~G~~~~~lA~~---~p~----~~v~giD~s~~~l~~a~~~~ 78 (218)
T 3dxy_A 36 PVTLEIGFGMGASLVAMAKD---RPE----QDFLGIEVHSPGVGACLASA 78 (218)
T ss_dssp CEEEEESCTTCHHHHHHHHH---CTT----SEEEEECSCHHHHHHHHHHH
T ss_pred CeEEEEeeeChHHHHHHHHH---CCC----CeEEEEEecHHHHHHHHHHH
Confidence 48999999999988877653 333 36999999999876555544
No 135
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=94.47 E-value=0.05 Score=45.89 Aligned_cols=41 Identities=15% Similarity=0.079 Sum_probs=32.6
Q ss_pred eEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 163 NLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 163 ~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
+|+|+|||+|.++..+++. ..+++.||+|+.+.+.-++++.
T Consensus 32 ~vLdiGcG~G~~~~~l~~~---------~~~v~~vD~s~~~~~~a~~~~~ 72 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL---------GYEVTAVDQSSVGLAKAKQLAQ 72 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT---------TCEEEEECSSHHHHHHHHHHHH
T ss_pred CEEEECCCCCHhHHHHHhC---------CCeEEEEECCHHHHHHHHHHHH
Confidence 9999999999998766542 1379999999999877666653
No 136
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=94.47 E-value=0.11 Score=44.72 Aligned_cols=45 Identities=7% Similarity=0.054 Sum_probs=35.5
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.+|+|+|||+|..+..+++.+ | ...+++.||+|+.+.+.-++++.
T Consensus 66 ~~vLdiG~G~G~~~~~la~~~---~---~~~~v~~vD~~~~~~~~a~~~~~ 110 (225)
T 3tr6_A 66 KKVIDIGTFTGYSAIAMGLAL---P---KDGTLITCDVDEKSTALAKEYWE 110 (225)
T ss_dssp SEEEEECCTTSHHHHHHHTTC---C---TTCEEEEEESCHHHHHHHHHHHH
T ss_pred CEEEEeCCcchHHHHHHHHhC---C---CCCEEEEEeCCHHHHHHHHHHHH
Confidence 489999999999988876543 2 13579999999998887777664
No 137
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=94.46 E-value=0.1 Score=46.83 Aligned_cols=50 Identities=24% Similarity=0.315 Sum_probs=38.1
Q ss_pred CCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 157 GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 157 g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
+.....+|+|+|||+|.++..+++.+. | ..+++.||+|+...+.-++++.
T Consensus 109 ~~~~~~~VLDiG~G~G~~~~~la~~~~--~----~~~v~~vD~s~~~~~~a~~~~~ 158 (277)
T 1o54_A 109 DVKEGDRIIDTGVGSGAMCAVLARAVG--S----SGKVFAYEKREEFAKLAESNLT 158 (277)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHTT--T----TCEEEEECCCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCcCCHHHHHHHHHhC--C----CcEEEEEECCHHHHHHHHHHHH
Confidence 433445899999999999998877532 1 2479999999998887776654
No 138
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=94.45 E-value=0.1 Score=45.28 Aligned_cols=44 Identities=16% Similarity=0.220 Sum_probs=35.6
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.+|+|+|||.|.++..+++.+ | ..+++.||+|+.+.+.-++++.
T Consensus 56 ~~vLdiG~G~G~~~~~la~~~---~----~~~v~~vD~~~~~~~~a~~~~~ 99 (233)
T 2gpy_A 56 ARILEIGTAIGYSAIRMAQAL---P----EATIVSIERDERRYEEAHKHVK 99 (233)
T ss_dssp SEEEEECCTTSHHHHHHHHHC---T----TCEEEEECCCHHHHHHHHHHHH
T ss_pred CEEEEecCCCcHHHHHHHHHC---C----CCEEEEEECCHHHHHHHHHHHH
Confidence 489999999999998877653 2 2479999999999887776654
No 139
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=94.43 E-value=0.09 Score=49.06 Aligned_cols=48 Identities=19% Similarity=0.250 Sum_probs=35.9
Q ss_pred CCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 157 GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 157 g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
+.....+|+|+|||+|.++..+++.. | .++++.+|+ |.+.+.-++++.
T Consensus 179 ~~~~~~~vlDvG~G~G~~~~~l~~~~---~----~~~~~~~D~-~~~~~~a~~~~~ 226 (374)
T 1qzz_A 179 DWSAVRHVLDVGGGNGGMLAAIALRA---P----HLRGTLVEL-AGPAERARRRFA 226 (374)
T ss_dssp CCTTCCEEEEETCTTSHHHHHHHHHC---T----TCEEEEEEC-HHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHC---C----CCEEEEEeC-HHHHHHHHHHHH
Confidence 33445699999999999998887653 3 347999999 877766665553
No 140
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=94.43 E-value=0.1 Score=46.15 Aligned_cols=43 Identities=19% Similarity=0.264 Sum_probs=33.8
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
..+|+|+|||+|.++..+.+. ..+++.||+|+.+.+.-+++..
T Consensus 55 ~~~vLDiGcG~G~~~~~l~~~---------~~~v~gvD~s~~~l~~a~~~~~ 97 (260)
T 2avn_A 55 PCRVLDLGGGTGKWSLFLQER---------GFEVVLVDPSKEMLEVAREKGV 97 (260)
T ss_dssp CCEEEEETCTTCHHHHHHHTT---------TCEEEEEESCHHHHHHHHHHTC
T ss_pred CCeEEEeCCCcCHHHHHHHHc---------CCeEEEEeCCHHHHHHHHhhcC
Confidence 459999999999998876542 1379999999999887666543
No 141
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=94.40 E-value=0.12 Score=49.58 Aligned_cols=46 Identities=24% Similarity=0.340 Sum_probs=36.5
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~ 213 (320)
.-+|+|+|||+|.++..+.+.. | ..+++.||+|+.+.+.-++++..
T Consensus 223 ~~~VLDlGcG~G~~s~~la~~~---p----~~~V~gvD~s~~al~~Ar~n~~~ 268 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLLDKN---P----QAKVVFVDESPMAVASSRLNVET 268 (375)
T ss_dssp CSEEEEETCTTCHHHHHHHHHC---T----TCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCeEEEEeCcchHHHHHHHHHC---C----CCEEEEEECcHHHHHHHHHHHHH
Confidence 3689999999999998887642 2 24799999999998877776643
No 142
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=94.38 E-value=0.073 Score=47.32 Aligned_cols=40 Identities=23% Similarity=0.389 Sum_probs=31.0
Q ss_pred CCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHH
Q 020840 157 GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQK 205 (320)
Q Consensus 157 g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~ 205 (320)
+.+...+|+|+|||+|.++..+.+ + ..+++-||+|+.+.+
T Consensus 31 ~~~~~~~vLDiGcG~G~~~~~l~~-----~----~~~v~gvD~s~~~~~ 70 (261)
T 3ege_A 31 NLPKGSVIADIGAGTGGYSVALAN-----Q----GLFVYAVEPSIVMRQ 70 (261)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHT-----T----TCEEEEECSCHHHHH
T ss_pred CCCCCCEEEEEcCcccHHHHHHHh-----C----CCEEEEEeCCHHHHH
Confidence 333456999999999999988764 2 247999999997754
No 143
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=94.37 E-value=0.059 Score=48.79 Aligned_cols=42 Identities=21% Similarity=0.250 Sum_probs=33.7
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
-+|+|+|||+|.++..+++. ..+++-||+|+.+.+.-++++.
T Consensus 84 ~~vLDlGcG~G~~~~~l~~~---------~~~v~gvD~s~~~~~~a~~~~~ 125 (299)
T 3g2m_A 84 GPVLELAAGMGRLTFPFLDL---------GWEVTALELSTSVLAAFRKRLA 125 (299)
T ss_dssp SCEEEETCTTTTTHHHHHTT---------TCCEEEEESCHHHHHHHHHHHH
T ss_pred CcEEEEeccCCHHHHHHHHc---------CCeEEEEECCHHHHHHHHHHHh
Confidence 38999999999998877653 1369999999999887766654
No 144
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=94.36 E-value=0.12 Score=44.48 Aligned_cols=45 Identities=22% Similarity=0.273 Sum_probs=35.1
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.+|+|+|||+|.++..+++.+ | ...+++.||+|+.+.+.-++++.
T Consensus 60 ~~vLdiG~G~G~~~~~la~~~---~---~~~~v~~vD~~~~~~~~a~~~~~ 104 (223)
T 3duw_A 60 RNILEIGTLGGYSTIWLARGL---S---SGGRVVTLEASEKHADIARSNIE 104 (223)
T ss_dssp SEEEEECCTTSHHHHHHHTTC---C---SSCEEEEEESCHHHHHHHHHHHH
T ss_pred CEEEEecCCccHHHHHHHHhC---C---CCCEEEEEECCHHHHHHHHHHHH
Confidence 489999999999998876543 2 13479999999998877666654
No 145
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=94.36 E-value=0.044 Score=47.90 Aligned_cols=46 Identities=15% Similarity=0.164 Sum_probs=35.1
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
..-+|+|+|||+|+++..+++.. + ..+++-||+|+.+.+.-+++..
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~---~----~~~v~gvD~s~~~~~~a~~~~~ 119 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIA---D----KGIVYAIEYAPRIMRELLDACA 119 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHT---T----TSEEEEEESCHHHHHHHHHHTT
T ss_pred CCCEEEEEcccCCHHHHHHHHHc---C----CcEEEEEECCHHHHHHHHHHhh
Confidence 44589999999999998887653 2 2368999999998776555543
No 146
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=94.35 E-value=0.076 Score=45.76 Aligned_cols=41 Identities=17% Similarity=0.245 Sum_probs=32.9
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.+|+|+|||+|.++..+++. .+++.||+|+.+.+.-++++.
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~----------~~v~~vD~s~~~~~~a~~~~~ 75 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADH----------YEVTGVDLSEEMLEIAQEKAM 75 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTT----------SEEEEEESCHHHHHHHHHHHH
T ss_pred CeEEEecCCCCHHHHHHhhC----------CeEEEEECCHHHHHHHHHhhh
Confidence 58999999999988766432 379999999999887766653
No 147
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=94.35 E-value=0.042 Score=50.89 Aligned_cols=67 Identities=13% Similarity=0.195 Sum_probs=43.2
Q ss_pred CCCCCCCeecCCChhHHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhh
Q 020840 124 VFGAEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTL 203 (320)
Q Consensus 124 ~~G~~GDFiTSpEIsp~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~L 203 (320)
.+|. .|.+.+++.. .+++. ++....-+|+|+|||+|.++..+++. ..+++-||+|+.+
T Consensus 19 ~~Gq--~fl~~~~i~~--------~i~~~---~~~~~~~~VLDiG~G~G~lt~~La~~---------~~~v~~vDi~~~~ 76 (299)
T 2h1r_A 19 FQGQ--HLLKNPGILD--------KIIYA---AKIKSSDIVLEIGCGTGNLTVKLLPL---------AKKVITIDIDSRM 76 (299)
T ss_dssp ------CEECCHHHHH--------HHHHH---HCCCTTCEEEEECCTTSTTHHHHTTT---------SSEEEEECSCHHH
T ss_pred cccc--ceecCHHHHH--------HHHHh---cCCCCcCEEEEEcCcCcHHHHHHHhc---------CCEEEEEECCHHH
Confidence 3553 6888776532 22222 23333458999999999999876542 1369999999999
Q ss_pred HHHHHHhcc
Q 020840 204 QKLQHHNLK 212 (320)
Q Consensus 204 r~~Q~e~L~ 212 (320)
.+.-++++.
T Consensus 77 ~~~a~~~~~ 85 (299)
T 2h1r_A 77 ISEVKKRCL 85 (299)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 887766653
No 148
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=94.34 E-value=0.065 Score=51.66 Aligned_cols=82 Identities=18% Similarity=0.263 Sum_probs=52.9
Q ss_pred CCCCcccCC---CCCCCCCCCeecCCChhHHHHHHHHHHHHHHHHHcC---CCCcceEEEecCCchhHHHHHHHHHhcCc
Q 020840 113 NPKAGFYIN---RDVFGAEGDFITSPEVSQMFGEMVGVWAMCLWEQMG---QPNRVNLVELGPGRGTLMADLLRGASKFK 186 (320)
Q Consensus 113 ~P~~GYY~~---~~~~G~~GDFiTSpEIsp~FGe~IA~~i~~~w~~~g---~p~~l~IvEiGaG~GtLa~DIL~~l~~~p 186 (320)
-|-.||..- +..+|. .|++.+.|.. .|++...-.. .+....|+|||||.|.|...+|+..+
T Consensus 15 ~~~~~~~~~~~~kk~lGQ--nFL~d~~i~~--------~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~--- 81 (353)
T 1i4w_A 15 VPIPGIKDISKLKFFYGF--KYLWNPTVYN--------KIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYC--- 81 (353)
T ss_dssp -CCCCCCTTCSSCCGGGC--CCBCCHHHHH--------HHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHC---
T ss_pred CcccchhhccCCCCCCCc--CccCCHHHHH--------HHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCC---
Confidence 355566543 234664 5999877642 2222221111 11236899999999999999998542
Q ss_pred CcccceeEEEEecChhhHHHHHHhc
Q 020840 187 NFTESLHIHLVECSPTLQKLQHHNL 211 (320)
Q Consensus 187 ~~~~~l~y~iVE~Sp~Lr~~Q~e~L 211 (320)
.-+++.||+.+.|...-++++
T Consensus 82 ----~~~vvavE~D~~l~~~L~~~~ 102 (353)
T 1i4w_A 82 ----PRQYSLLEKRSSLYKFLNAKF 102 (353)
T ss_dssp ----CSEEEEECCCHHHHHHHHHHT
T ss_pred ----CCEEEEEecCHHHHHHHHHhc
Confidence 125899999999988777765
No 149
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=94.33 E-value=0.12 Score=45.62 Aligned_cols=45 Identities=9% Similarity=0.039 Sum_probs=36.9
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
-+|+|+|||.|..+..+++.+.. ..+++.||+|+.+.+.-++++.
T Consensus 72 ~~VLeiG~G~G~~~~~la~~~~~------~~~v~~iD~~~~~~~~a~~~~~ 116 (237)
T 3c3y_A 72 KKTIEVGVFTGYSLLLTALSIPD------DGKITAIDFDREAYEIGLPFIR 116 (237)
T ss_dssp CEEEEECCTTSHHHHHHHHHSCT------TCEEEEEESCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCCHHHHHHHHhCCC------CCEEEEEECCHHHHHHHHHHHH
Confidence 48999999999999988876421 2479999999999888877764
No 150
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=94.32 E-value=0.11 Score=45.73 Aligned_cols=48 Identities=21% Similarity=0.140 Sum_probs=36.4
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
...+|+|+|||+|.++..+++.++ .+ ..+++-||+|+.+.+.-++++.
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~-~~----~~~v~gvDis~~~l~~A~~~~~ 98 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHR-RS----LRQVIASDVDPAPLELAAKNLA 98 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTG-GG----EEEEEEEESCHHHHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhc-cC----CCeEEEEECCHHHHHHHHHHHH
Confidence 457999999999999888876531 11 2479999999999876665553
No 151
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=94.32 E-value=0.12 Score=44.94 Aligned_cols=47 Identities=26% Similarity=0.342 Sum_probs=36.7
Q ss_pred CCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 157 GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 157 g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
+....-+|+|+|||.|.++..+++. ..+++.||+|+...+.-++++.
T Consensus 88 ~~~~~~~vldiG~G~G~~~~~l~~~---------~~~v~~vD~~~~~~~~a~~~~~ 134 (248)
T 2yvl_A 88 NLNKEKRVLEFGTGSGALLAVLSEV---------AGEVWTFEAVEEFYKTAQKNLK 134 (248)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHH---------SSEEEEECSCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCccHHHHHHHHh---------CCEEEEEecCHHHHHHHHHHHH
Confidence 4333458999999999999988775 1379999999998887776653
No 152
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=94.29 E-value=0.096 Score=49.17 Aligned_cols=62 Identities=16% Similarity=0.323 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccc
Q 020840 140 MFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (320)
Q Consensus 140 ~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~ 213 (320)
.|-++++...+. . .+.+.+|+|+|+|.|.++..+++. .| ..+++.||+||.+.+.-++.+..
T Consensus 93 ~Y~e~l~~l~l~---~--~~~~~~VLdIG~G~G~~~~~l~~~---~~----~~~v~~vDid~~~i~~Ar~~~~~ 154 (314)
T 2b2c_A 93 SYQEMLAHLPMF---A--HPDPKRVLIIGGGDGGILREVLKH---ES----VEKVTMCEIDEMVIDVAKKFLPG 154 (314)
T ss_dssp HHHHHHHHHHHH---H--SSSCCEEEEESCTTSHHHHHHTTC---TT----CCEEEEECSCHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHh---h--CCCCCEEEEEcCCcCHHHHHHHHc---CC----CCEEEEEECCHHHHHHHHHHHHH
Confidence 456666543221 1 233469999999999998887653 12 24799999999999988887753
No 153
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=94.28 E-value=0.08 Score=44.87 Aligned_cols=43 Identities=16% Similarity=0.273 Sum_probs=33.7
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhc
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L 211 (320)
...+|+|+|||+|.++..+++. + .+++.||+|+.+.+.-++++
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~----~-----~~~~~~D~~~~~~~~~~~~~ 74 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKEN----G-----TRVSGIEAFPEAAEQAKEKL 74 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTT----T-----CEEEEEESSHHHHHHHHTTS
T ss_pred CCCcEEEeCCCCCHHHHHHHhc----C-----CeEEEEeCCHHHHHHHHHhC
Confidence 3469999999999988876542 2 37999999999887666554
No 154
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=94.27 E-value=0.19 Score=52.04 Aligned_cols=61 Identities=23% Similarity=0.305 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHHHHcCC-CCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChh
Q 020840 139 QMFGEMVGVWAMCLWEQMGQ-PNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPT 202 (320)
Q Consensus 139 p~FGe~IA~~i~~~w~~~g~-p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~ 202 (320)
..|-++|...+.+...+... .....|+.+|||||-|..-.+++.+... .+++++-||.||.
T Consensus 335 ~~Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~---~~vkVyAVEknp~ 396 (637)
T 4gqb_A 335 SQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQAD---RRIKLYAVEKNPN 396 (637)
T ss_dssp HHHHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTT---CEEEEEEEESCHH
T ss_pred HHHHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcC---CCcEEEEEECCHH
Confidence 56888998888764433222 2345788999999999888888876422 3467899999984
No 155
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=94.25 E-value=0.072 Score=47.94 Aligned_cols=47 Identities=17% Similarity=0.304 Sum_probs=36.9
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccc
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~ 213 (320)
...+|+|+|||+|.++..+.... | ..+++.||+++.+.+.-++++..
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~---~----~~~v~gvDi~~~~~~~a~~n~~~ 82 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARL---E----KAEVTLYERSQEMAEFARRSLEL 82 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHC---T----TEEEEEEESSHHHHHHHHHHTTS
T ss_pred CCCEEEEeCChHhHHHHHHHHhC---C----CCeEEEEECCHHHHHHHHHHHHh
Confidence 34589999999999988776542 2 25799999999998887777653
No 156
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=94.23 E-value=0.061 Score=45.05 Aligned_cols=35 Identities=11% Similarity=0.165 Sum_probs=28.7
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHH
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKL 206 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~ 206 (320)
-+|+|+|||+|.++..+.+. . +++-||+|+.+.+.
T Consensus 25 ~~vLD~GcG~G~~~~~l~~~------~----~v~gvD~s~~~~~~ 59 (170)
T 3q87_B 25 KIVLDLGTSTGVITEQLRKR------N----TVVSTDLNIRALES 59 (170)
T ss_dssp CEEEEETCTTCHHHHHHTTT------S----EEEEEESCHHHHHT
T ss_pred CeEEEeccCccHHHHHHHhc------C----cEEEEECCHHHHhc
Confidence 48999999999988776432 1 79999999998766
No 157
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=94.22 E-value=0.11 Score=49.18 Aligned_cols=62 Identities=16% Similarity=0.306 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 139 QMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 139 p~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
..|-|+|+...+ ...+.+.+|+|+|||+|.++..+++. .| ..+++.||+|+.+.+.-++++.
T Consensus 104 ~~y~e~L~~l~l-----~~~~~~~~VLdIG~G~G~~a~~la~~---~~----~~~V~~VDis~~~l~~Ar~~~~ 165 (334)
T 1xj5_A 104 CAYQEMITHLPL-----CSIPNPKKVLVIGGGDGGVLREVARH---AS----IEQIDMCEIDKMVVDVSKQFFP 165 (334)
T ss_dssp HHHHHHHHHHHH-----TTSSCCCEEEEETCSSSHHHHHHTTC---TT----CCEEEEEESCHHHHHHHHHHCH
T ss_pred hHHHHHHHHHHH-----hhCCCCCEEEEECCCccHHHHHHHHc---CC----CCEEEEEECCHHHHHHHHHHHH
Confidence 456676664321 22344569999999999988877642 12 2479999999999888777664
No 158
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=94.16 E-value=0.13 Score=46.08 Aligned_cols=45 Identities=16% Similarity=0.083 Sum_probs=36.6
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
-+|+|+|||+|..+..+++.+. . ..+++.||+|+.+.+.-++++.
T Consensus 81 ~~VLeiG~G~G~~~~~la~~~~---~---~~~v~~iD~s~~~~~~a~~~~~ 125 (247)
T 1sui_A 81 KNTMEIGVYTGYSLLATALAIP---E---DGKILAMDINKENYELGLPVIK 125 (247)
T ss_dssp CEEEEECCGGGHHHHHHHHHSC---T---TCEEEEEESCCHHHHHHHHHHH
T ss_pred CEEEEeCCCcCHHHHHHHHhCC---C---CCEEEEEECCHHHHHHHHHHHH
Confidence 4899999999999998877642 1 2479999999999888777664
No 159
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=94.13 E-value=0.065 Score=48.69 Aligned_cols=54 Identities=15% Similarity=0.092 Sum_probs=38.7
Q ss_pred HHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 153 WEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 153 w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
...++..+.-+|+|+|||+|+++..+.+.... .-+++-||+||.+.+.-+++..
T Consensus 70 l~~l~ikpG~~VldlG~G~G~~~~~la~~VG~------~G~V~avD~s~~~~~~l~~~a~ 123 (233)
T 4df3_A 70 LIELPVKEGDRILYLGIASGTTASHMSDIIGP------RGRIYGVEFAPRVMRDLLTVVR 123 (233)
T ss_dssp CSCCCCCTTCEEEEETCTTSHHHHHHHHHHCT------TCEEEEEECCHHHHHHHHHHST
T ss_pred hhhcCCCCCCEEEEecCcCCHHHHHHHHHhCC------CceEEEEeCCHHHHHHHHHhhH
Confidence 33444434469999999999999998876532 2358899999998765555443
No 160
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=94.12 E-value=0.059 Score=46.61 Aligned_cols=47 Identities=17% Similarity=0.102 Sum_probs=34.9
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
..-+|+|+|||+|+++..+.+.+.. ..+++-||+|+.+.+..+++..
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~------~~~v~~vD~s~~~~~~~~~~~~ 119 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGW------EGKIFGIEFSPRVLRELVPIVE 119 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCT------TSEEEEEESCHHHHHHHHHHHS
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCC------CeEEEEEECCHHHHHHHHHHHh
Confidence 3458999999999999988776421 1268999999987665555443
No 161
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=94.06 E-value=0.17 Score=46.16 Aligned_cols=45 Identities=13% Similarity=0.269 Sum_probs=34.0
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
...+|+|+|||+|.++..+++. + ..+|+.||+|+.+.+.-++++.
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~----~----~~~v~gvD~s~~~l~~a~~~~~ 78 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKG----R----INKLVCTDIADVSVKQCQQRYE 78 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHT----T----CSEEEEEESCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHhc----C----CCEEEEEeCCHHHHHHHHHHHH
Confidence 3458999999999988877651 1 2379999999998876666553
No 162
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=94.06 E-value=0.12 Score=47.94 Aligned_cols=71 Identities=17% Similarity=0.300 Sum_probs=45.5
Q ss_pred cCCChhHHHHHHHHHHHH---HHHHHcCCCC-cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHH
Q 020840 133 TSPEVSQMFGEMVGVWAM---CLWEQMGQPN-RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQH 208 (320)
Q Consensus 133 TSpEIsp~FGe~IA~~i~---~~w~~~g~p~-~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~ 208 (320)
+.|+....|......... .+....+... ..+|+|+|||+|.++..+++. +|. ++++.+|+ |...+.-+
T Consensus 148 ~~~~~~~~f~~~m~~~~~~~~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~---~p~----~~~~~~D~-~~~~~~a~ 219 (352)
T 3mcz_A 148 HDTRARDAFNDAMVRLSQPMVDVVSELGVFARARTVIDLAGGHGTYLAQVLRR---HPQ----LTGQIWDL-PTTRDAAR 219 (352)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTCCEEEEETCTTCHHHHHHHHH---CTT----CEEEEEEC-GGGHHHHH
T ss_pred cCHHHHHHHHHHHHhhhhhHHHHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHh---CCC----CeEEEEEC-HHHHHHHH
Confidence 456666667665554322 2333333333 569999999999999988764 333 57899999 66555444
Q ss_pred Hhc
Q 020840 209 HNL 211 (320)
Q Consensus 209 e~L 211 (320)
+++
T Consensus 220 ~~~ 222 (352)
T 3mcz_A 220 KTI 222 (352)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 163
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=94.00 E-value=0.11 Score=48.13 Aligned_cols=44 Identities=7% Similarity=0.055 Sum_probs=31.6
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhc
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L 211 (320)
...+|+|+|||+|.++...++ .. ..+++-||+|+.+.+.-+++.
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~---~~-----~~~v~GiD~S~~~l~~A~~~~ 91 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFY---GE-----IALLVATDPDADAIARGNERY 91 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHH---TT-----CSEEEEEESCHHHHHHHHHHH
T ss_pred CCCeEEEEecCCcHhHHHHHh---cC-----CCeEEEEECCHHHHHHHHHHH
Confidence 346899999999975554332 11 126999999999987666654
No 164
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=93.90 E-value=0.084 Score=46.41 Aligned_cols=44 Identities=16% Similarity=0.221 Sum_probs=33.3
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L 211 (320)
..+|+|+|||+|.++..+... .| ..+++.||+|+.+.+.-+++.
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~---~~----~~~v~~vD~s~~~~~~a~~~~ 114 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKIC---FP----HLHVTIVDSLNKRITFLEKLS 114 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHH---CT----TCEEEEEESCHHHHHHHHHHH
T ss_pred CCEEEEecCCCCHHHHHHHHh---CC----CCEEEEEeCCHHHHHHHHHHH
Confidence 358999999999988876642 22 247999999998877665544
No 165
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=93.90 E-value=0.12 Score=45.93 Aligned_cols=45 Identities=16% Similarity=0.189 Sum_probs=35.4
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.+|+|+|||+|.++..+++.+ | ...+++.||+|+.+.+.-++++.
T Consensus 65 ~~VLdiG~G~G~~~~~la~~~---~---~~~~v~~vD~s~~~~~~a~~~~~ 109 (248)
T 3tfw_A 65 KRILEIGTLGGYSTIWMAREL---P---ADGQLLTLEADAHHAQVARENLQ 109 (248)
T ss_dssp SEEEEECCTTSHHHHHHHTTS---C---TTCEEEEEECCHHHHHHHHHHHH
T ss_pred CEEEEecCCchHHHHHHHHhC---C---CCCEEEEEECCHHHHHHHHHHHH
Confidence 489999999999998776543 2 13579999999998887766654
No 166
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=93.88 E-value=0.1 Score=48.89 Aligned_cols=63 Identities=19% Similarity=0.242 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccc
Q 020840 139 QMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (320)
Q Consensus 139 p~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~ 213 (320)
..|-|+++..... ..+.+.+|+|+|||+|.++..+++. .| ..+++.||+||.+.+.-++++..
T Consensus 100 ~~y~e~l~~~~l~-----~~~~~~~VLdiG~G~G~~~~~l~~~---~~----~~~v~~vDis~~~l~~ar~~~~~ 162 (321)
T 2pt6_A 100 FAYHEMMTHVPMT-----VSKEPKNVLVVGGGDGGIIRELCKY---KS----VENIDICEIDETVIEVSKIYFKN 162 (321)
T ss_dssp HHHHHHHHHHHHH-----HSSSCCEEEEEECTTCHHHHHHTTC---TT----CCEEEEEESCHHHHHHHHHHCTT
T ss_pred hHHHHHHHHHHHh-----cCCCCCEEEEEcCCccHHHHHHHHc---CC----CCEEEEEECCHHHHHHHHHHHHh
Confidence 3566776643221 1234469999999999998887642 12 24799999999999888877753
No 167
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=93.84 E-value=0.18 Score=43.31 Aligned_cols=46 Identities=17% Similarity=0.215 Sum_probs=36.1
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
..+|+|+|||+|.++..+.+.+. ...+++.||+|+.+.+.-++++.
T Consensus 78 ~~~vLDiG~G~G~~~~~la~~~~------~~~~v~~vD~s~~~~~~a~~~~~ 123 (226)
T 1i1n_A 78 GAKALDVGSGSGILTACFARMVG------CTGKVIGIDHIKELVDDSVNNVR 123 (226)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHC------TTCEEEEEESCHHHHHHHHHHHH
T ss_pred CCEEEEEcCCcCHHHHHHHHHhC------CCcEEEEEeCCHHHHHHHHHHHH
Confidence 45899999999999998876542 12379999999999887666654
No 168
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=93.84 E-value=0.08 Score=48.30 Aligned_cols=46 Identities=13% Similarity=0.171 Sum_probs=35.8
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~ 213 (320)
..+|+|+|||+|.++..+.+.+ + ..+++-||+|+.+.+.-++++..
T Consensus 47 ~~~VLDiGCG~G~~~~~la~~~---~----~~~v~gvDis~~~i~~A~~~~~~ 92 (292)
T 3g07_A 47 GRDVLDLGCNVGHLTLSIACKW---G----PSRMVGLDIDSRLIHSARQNIRH 92 (292)
T ss_dssp TSEEEEESCTTCHHHHHHHHHT---C----CSEEEEEESCHHHHHHHHHTC--
T ss_pred CCcEEEeCCCCCHHHHHHHHHc---C----CCEEEEECCCHHHHHHHHHHHHh
Confidence 3589999999999998887653 2 23799999999998877776643
No 169
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=93.84 E-value=0.08 Score=53.41 Aligned_cols=74 Identities=12% Similarity=0.147 Sum_probs=50.8
Q ss_pred CCCCeecCCChhHHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcC-cCc----------ccceeEE
Q 020840 127 AEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKF-KNF----------TESLHIH 195 (320)
Q Consensus 127 ~~GDFiTSpEIsp~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~-p~~----------~~~l~y~ 195 (320)
..|.|+|+.+|..+..+++ ......+|+|.+||+|.|...+.++++.. ++. .....++
T Consensus 147 ~~G~fyTP~~iv~~mv~~l-----------~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~ 215 (541)
T 2ar0_A 147 GAGQYFTPRPLIKTIIHLL-----------KPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFI 215 (541)
T ss_dssp ---CCCCCHHHHHHHHHHH-----------CCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEE
T ss_pred cCCeeeCCHHHHHHHHHHh-----------ccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEE
Confidence 4699999998876644432 11123589999999999999999988642 221 0123699
Q ss_pred EEecChhhHHHHHHhc
Q 020840 196 LVECSPTLQKLQHHNL 211 (320)
Q Consensus 196 iVE~Sp~Lr~~Q~e~L 211 (320)
-+|+++...+.-+.++
T Consensus 216 GiEid~~~~~lA~~nl 231 (541)
T 2ar0_A 216 GLELVPGTRRLALMNC 231 (541)
T ss_dssp EEESCHHHHHHHHHHH
T ss_pred EEcCCHHHHHHHHHHH
Confidence 9999999887766554
No 170
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=93.82 E-value=0.1 Score=46.91 Aligned_cols=45 Identities=22% Similarity=0.367 Sum_probs=35.3
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
..+|+|+|||+|.++..++... | ..+++.||+|+.+.+.-++++.
T Consensus 110 ~~~vLDlG~GsG~~~~~la~~~---~----~~~v~~vD~s~~~l~~a~~n~~ 154 (276)
T 2b3t_A 110 PCRILDLGTGTGAIALALASER---P----DCEIIAVDRMPDAVSLAQRNAQ 154 (276)
T ss_dssp CCEEEEETCTTSHHHHHHHHHC---T----TSEEEEECSSHHHHHHHHHHHH
T ss_pred CCEEEEecCCccHHHHHHHHhC---C----CCEEEEEECCHHHHHHHHHHHH
Confidence 3589999999999998876543 2 2479999999998877666554
No 171
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=93.77 E-value=0.075 Score=46.29 Aligned_cols=42 Identities=14% Similarity=0.146 Sum_probs=34.0
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L 211 (320)
..+|+|+|||+|.++..+.+.. + +++-||+|+.+.+.-++++
T Consensus 57 ~~~vLD~GcG~G~~~~~la~~~---~------~v~gvD~s~~~~~~a~~~~ 98 (245)
T 3ggd_A 57 ELPLIDFACGNGTQTKFLSQFF---P------RVIGLDVSKSALEIAAKEN 98 (245)
T ss_dssp TSCEEEETCTTSHHHHHHHHHS---S------CEEEEESCHHHHHHHHHHS
T ss_pred CCeEEEEcCCCCHHHHHHHHhC---C------CEEEEECCHHHHHHHHHhC
Confidence 3589999999999998887642 1 5899999999887776655
No 172
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=93.76 E-value=0.16 Score=40.62 Aligned_cols=37 Identities=16% Similarity=0.255 Sum_probs=29.2
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhH
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQ 204 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr 204 (320)
..+|+|+|||+|.++..+++.+. + ..+++.||+|+ +.
T Consensus 23 ~~~vLd~G~G~G~~~~~l~~~~~--~----~~~v~~~D~~~-~~ 59 (180)
T 1ej0_A 23 GMTVVDLGAAPGGWSQYVVTQIG--G----KGRIIACDLLP-MD 59 (180)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHC--T----TCEEEEEESSC-CC
T ss_pred CCeEEEeCCCCCHHHHHHHHHhC--C----CCeEEEEECcc-cc
Confidence 45899999999999998877641 1 23799999999 54
No 173
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=93.74 E-value=0.067 Score=48.96 Aligned_cols=59 Identities=17% Similarity=0.253 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhc
Q 020840 140 MFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (320)
Q Consensus 140 ~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L 211 (320)
.|-++++...+ . . .+.+.+|+|+|||+|.++..+++. + ..+++.||++|.+.+.-++.+
T Consensus 60 ~y~e~l~~~~l--~-~--~~~~~~VLdiG~G~G~~~~~l~~~----~----~~~v~~vDid~~~i~~ar~~~ 118 (281)
T 1mjf_A 60 SYHEPLVHPAM--L-A--HPKPKRVLVIGGGDGGTVREVLQH----D----VDEVIMVEIDEDVIMVSKDLI 118 (281)
T ss_dssp HHHHHHHHHHH--H-H--SSCCCEEEEEECTTSHHHHHHTTS----C----CSEEEEEESCHHHHHHHHHHT
T ss_pred HHHHHHHHHHH--h-h--CCCCCeEEEEcCCcCHHHHHHHhC----C----CCEEEEEECCHHHHHHHHHHH
Confidence 46666653211 1 1 234468999999999999887653 2 247999999999998877776
No 174
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=93.71 E-value=0.079 Score=46.29 Aligned_cols=38 Identities=24% Similarity=0.164 Sum_probs=29.3
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhH
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQ 204 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr 204 (320)
..-+|+|+|||+|.++..+.+... ..+++-||+||.+.
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~-------~~~V~gvD~s~~~l 94 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVD-------EGIIYAVEYSAKPF 94 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTT-------TSEEEEECCCHHHH
T ss_pred CCCEEEEECCcCCHHHHHHHHHcC-------CCEEEEEECCHHHH
Confidence 345899999999998887765431 13689999999754
No 175
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=93.70 E-value=0.075 Score=47.39 Aligned_cols=43 Identities=21% Similarity=0.343 Sum_probs=32.1
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHh
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHN 210 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~ 210 (320)
...|+|||||+|.++..+.+ .+|+ ..++-||+|+.+.+.-+++
T Consensus 47 ~~~vLDiGcG~G~~~~~la~---~~p~----~~v~GiDis~~~l~~A~~~ 89 (235)
T 3ckk_A 47 QVEFADIGCGYGGLLVELSP---LFPD----TLILGLEIRVKVSDYVQDR 89 (235)
T ss_dssp CEEEEEETCTTCHHHHHHGG---GSTT----SEEEEEESCHHHHHHHHHH
T ss_pred CCeEEEEccCCcHHHHHHHH---HCCC----CeEEEEECCHHHHHHHHHH
Confidence 35899999999998877643 2343 4799999999987654443
No 176
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=93.69 E-value=0.15 Score=44.86 Aligned_cols=45 Identities=13% Similarity=0.137 Sum_probs=35.5
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.+|+|+|||.|..+..+++.+ | ...+++.||+|+.+.+.-++++.
T Consensus 74 ~~vLdiG~G~G~~~~~la~~~---~---~~~~v~~iD~~~~~~~~a~~~~~ 118 (232)
T 3cbg_A 74 KQVLEIGVFRGYSALAMALQL---P---PDGQIIACDQDPNATAIAKKYWQ 118 (232)
T ss_dssp CEEEEECCTTSHHHHHHHTTS---C---TTCEEEEEESCHHHHHHHHHHHH
T ss_pred CEEEEecCCCCHHHHHHHHhC---C---CCCEEEEEECCHHHHHHHHHHHH
Confidence 489999999999998887643 2 12479999999999887776654
No 177
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=93.68 E-value=0.17 Score=46.78 Aligned_cols=47 Identities=23% Similarity=0.304 Sum_probs=36.6
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
..-+|+|+|||.|.++..+.+... ...+++.||+|+.+.+.-++++.
T Consensus 75 ~~~~VLDiGcG~G~~~~~la~~~~------~~~~v~gvD~s~~~~~~a~~~~~ 121 (317)
T 1dl5_A 75 KGMRVLEIGGGTGYNAAVMSRVVG------EKGLVVSVEYSRKICEIAKRNVE 121 (317)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHC------TTCEEEEEESCHHHHHHHHHHHH
T ss_pred CcCEEEEecCCchHHHHHHHHhcC------CCCEEEEEECCHHHHHHHHHHHH
Confidence 345999999999999988876532 12469999999999887777654
No 178
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=93.67 E-value=0.26 Score=49.65 Aligned_cols=46 Identities=17% Similarity=0.275 Sum_probs=35.0
Q ss_pred HcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhc
Q 020840 155 QMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (320)
Q Consensus 155 ~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L 211 (320)
.++.| ++|+++|||.|.|+..+.+. ..+++-||+|+.+.+.-+...
T Consensus 63 ~~~~~--~~vLDvGCG~G~~~~~la~~---------ga~V~giD~~~~~i~~a~~~a 108 (569)
T 4azs_A 63 ALGRP--LNVLDLGCAQGFFSLSLASK---------GATIVGIDFQQENINVCRALA 108 (569)
T ss_dssp HHTSC--CEEEEETCTTSHHHHHHHHT---------TCEEEEEESCHHHHHHHHHHH
T ss_pred hcCCC--CeEEEECCCCcHHHHHHHhC---------CCEEEEECCCHHHHHHHHHHH
Confidence 34554 79999999999998887552 126999999999877655543
No 179
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=93.65 E-value=0.12 Score=45.41 Aligned_cols=45 Identities=11% Similarity=0.092 Sum_probs=35.9
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
..+|+|+|||+|.++..++.... ..+++.||+|+.+.+.-++++.
T Consensus 66 ~~~vLDlG~G~G~~~~~la~~~~-------~~~v~gvD~s~~~~~~a~~~~~ 110 (254)
T 2h00_A 66 LRRGIDIGTGASCIYPLLGATLN-------GWYFLATEVDDMCFNYAKKNVE 110 (254)
T ss_dssp CCEEEEESCTTTTHHHHHHHHHH-------CCEEEEEESCHHHHHHHHHHHH
T ss_pred CCEEEEeCCChhHHHHHHHHhCC-------CCeEEEEECCHHHHHHHHHHHH
Confidence 45899999999999888776542 2479999999999887776664
No 180
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=93.62 E-value=0.13 Score=47.99 Aligned_cols=65 Identities=20% Similarity=0.301 Sum_probs=44.3
Q ss_pred cCCChhHHHHHHHHHHH----HHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhH
Q 020840 133 TSPEVSQMFGEMVGVWA----MCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQ 204 (320)
Q Consensus 133 TSpEIsp~FGe~IA~~i----~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr 204 (320)
+.|+....|....+.+. ..+.+..+.+...+|+|+|||+|.++..+++.. | .++++.+|.++.+.
T Consensus 153 ~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~---p----~~~~~~~D~~~~~~ 221 (348)
T 3lst_A 153 GDAEVEALYYEGMETVSAAEHLILARAGDFPATGTVADVGGGRGGFLLTVLREH---P----GLQGVLLDRAEVVA 221 (348)
T ss_dssp TCHHHHHHHHHHHHHHHHTTHHHHHHHSCCCSSEEEEEETCTTSHHHHHHHHHC---T----TEEEEEEECHHHHT
T ss_pred hCHHHHHHHHHHHHHhhhhhHHHHHHhCCccCCceEEEECCccCHHHHHHHHHC---C----CCEEEEecCHHHhh
Confidence 34666667777665542 233344555566799999999999999888753 3 35789999955443
No 181
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=93.61 E-value=0.23 Score=45.59 Aligned_cols=43 Identities=12% Similarity=0.273 Sum_probs=34.8
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.+|+|+|||+|.++..+... | ..+++.||+|+...+.-++++.
T Consensus 125 ~~vLDlG~GsG~~~~~la~~----~----~~~v~~vDis~~al~~A~~n~~ 167 (284)
T 1nv8_A 125 KTVADIGTGSGAIGVSVAKF----S----DAIVFATDVSSKAVEIARKNAE 167 (284)
T ss_dssp CEEEEESCTTSHHHHHHHHH----S----SCEEEEEESCHHHHHHHHHHHH
T ss_pred CEEEEEeCchhHHHHHHHHC----C----CCEEEEEECCHHHHHHHHHHHH
Confidence 48999999999999887764 2 2479999999999887776654
No 182
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=93.61 E-value=0.42 Score=44.08 Aligned_cols=119 Identities=7% Similarity=0.030 Sum_probs=67.9
Q ss_pred CchHHHHHHHHHHHHhcCCcccHHHHHHHhhcCCCCcccCC---CCCCCCCCCeecCCChhHHHHHHHHHHHHHHHHHcC
Q 020840 81 KLESELVKHLKGIIKFRGGPISVAEYMEEVLTNPKAGFYIN---RDVFGAEGDFITSPEVSQMFGEMVGVWAMCLWEQMG 157 (320)
Q Consensus 81 ~~~~~L~~~i~~~I~~~~GpIsf~dfM~~aLY~P~~GYY~~---~~~~G~~GDFiTSpEIsp~FGe~IA~~i~~~w~~~g 157 (320)
.+...|...|..+++.. |-=+|++|.+....+....-... .--+|.. .|+-=|+--.++.+. ++.. .
T Consensus 35 ~k~~~~~~Rl~~r~~~~-~~~~~~~y~~~l~~~~~~~e~~~l~~~lt~~~t-~FfRd~~~f~~l~~~----llp~----~ 104 (274)
T 1af7_A 35 HKRDMVYNRLVRRLRAL-GLDDFGRYLSMLEANQNSAEWQAFINALTTNLT-AFFREAHHFPILAEH----ARRR----H 104 (274)
T ss_dssp GGHHHHHHHHHHHHHHH-TCCCHHHHHHHHHHCTTCTHHHHHHHHHCCCCC-CTTTTTTHHHHHHHH----HHHS----C
T ss_pred hhHHHHHHHHHHHHHHc-CCCCHHHHHHHHccCCCHHHHHHHHHHHhhcCc-cccCChHHHHHHHHH----ccCC----C
Confidence 45678888899888887 65689999877664332222111 1112322 343333332333322 1111 1
Q ss_pred CCCcceEEEecCCchhHHHHHHHHHhc-CcCcccceeEEEEecChhhHHHHHHhc
Q 020840 158 QPNRVNLVELGPGRGTLMADLLRGASK-FKNFTESLHIHLVECSPTLQKLQHHNL 211 (320)
Q Consensus 158 ~p~~l~IvEiGaG~GtLa~DIL~~l~~-~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L 211 (320)
.+.+|+++|||+|.-+..|.-.+.+ .+......+++-+|+|+.+-+.-++.+
T Consensus 105 --~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~ 157 (274)
T 1af7_A 105 --GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGI 157 (274)
T ss_dssp --SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTE
T ss_pred --CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcC
Confidence 3589999999999954443333322 121111358999999999987766654
No 183
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=93.47 E-value=0.11 Score=45.86 Aligned_cols=45 Identities=22% Similarity=0.284 Sum_probs=34.0
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhc
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L 211 (320)
....|+|+|||+|.++..+.+.. | ..+++-||+|+.+.+.-++++
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~---~----~~~v~gvD~s~~~l~~a~~~~ 93 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAF---P----EDLILGMEIRVQVTNYVEDRI 93 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHS---T----TSEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCHHHHHHHHhC---C----CCCEEEEEcCHHHHHHHHHHH
Confidence 34589999999999988876542 2 247999999999876555544
No 184
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=93.46 E-value=0.27 Score=47.36 Aligned_cols=43 Identities=23% Similarity=0.229 Sum_probs=35.0
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
..+|+|+|||+|.++..+++. ..+++.||+|+.+.+.-++++.
T Consensus 234 ~~~VLDlGcG~G~~~~~la~~---------g~~V~gvDis~~al~~A~~n~~ 276 (381)
T 3dmg_A 234 GRQVLDLGAGYGALTLPLARM---------GAEVVGVEDDLASVLSLQKGLE 276 (381)
T ss_dssp TCEEEEETCTTSTTHHHHHHT---------TCEEEEEESBHHHHHHHHHHHH
T ss_pred CCEEEEEeeeCCHHHHHHHHc---------CCEEEEEECCHHHHHHHHHHHH
Confidence 358999999999999887653 1379999999999887777664
No 185
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=93.45 E-value=0.075 Score=48.54 Aligned_cols=45 Identities=11% Similarity=0.053 Sum_probs=35.5
Q ss_pred CCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 159 PNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 159 p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
+.+-+|+|+|+|+|.++..+++. + .+++.||++|.+.+.-++.+.
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~----~-----~~v~~veid~~~i~~ar~~~~ 115 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY----D-----THIDFVQADEKILDSFISFFP 115 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS----S-----CEEEEECSCHHHHGGGTTTST
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC----C-----CEEEEEECCHHHHHHHHHHHH
Confidence 44569999999999998877653 1 279999999999887666653
No 186
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=93.30 E-value=0.19 Score=42.19 Aligned_cols=49 Identities=10% Similarity=0.005 Sum_probs=33.2
Q ss_pred HHHHHHHcCC-CCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChh
Q 020840 149 AMCLWEQMGQ-PNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPT 202 (320)
Q Consensus 149 i~~~w~~~g~-p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~ 202 (320)
+.+..+..+. ....+|+|+|||+|.++..+++.... ...+++-||+|+.
T Consensus 10 l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~-----~~~~v~gvD~s~~ 59 (201)
T 2plw_A 10 LIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKN-----YKNKIIGIDKKIM 59 (201)
T ss_dssp HHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTT-----SCEEEEEEESSCC
T ss_pred HHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCC-----CCceEEEEeCCcc
Confidence 3344444442 23468999999999999888765321 0247999999994
No 187
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=93.27 E-value=0.24 Score=47.13 Aligned_cols=44 Identities=18% Similarity=0.011 Sum_probs=34.1
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
-.|+|+|||+|+++..+.... + ..+++-+|+|+.+.+.-++++.
T Consensus 219 ~~vLD~gCGsG~~~i~~a~~~---~----~~~v~g~Dis~~~l~~A~~n~~ 262 (373)
T 3tm4_A 219 GSVLDPMCGSGTILIELALRR---Y----SGEIIGIEKYRKHLIGAEMNAL 262 (373)
T ss_dssp CCEEETTCTTCHHHHHHHHTT---C----CSCEEEEESCHHHHHHHHHHHH
T ss_pred CEEEEccCcCcHHHHHHHHhC---C----CCeEEEEeCCHHHHHHHHHHHH
Confidence 589999999999887765432 1 1268999999999887777664
No 188
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=93.26 E-value=0.097 Score=44.10 Aligned_cols=44 Identities=11% Similarity=0.064 Sum_probs=33.0
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
..+|+|+|||+|.++..++.. + ..+++.||+|+.+.+.-++++.
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~~----~----~~~v~~vD~s~~~~~~a~~~~~ 67 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFVE----D----GYKTYGIEISDLQLKKAENFSR 67 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHHH----T----TCEEEEEECCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHh----C----CCEEEEEECCHHHHHHHHHHHH
Confidence 358999999999986555532 1 1379999999999887666553
No 189
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=93.23 E-value=0.14 Score=46.02 Aligned_cols=50 Identities=22% Similarity=0.307 Sum_probs=38.3
Q ss_pred CCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 157 GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 157 g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
+.....+|+|+|||.|.++..+++.+. | ..+++.||+|+...+.-++++.
T Consensus 107 ~~~~~~~VLD~G~G~G~~~~~la~~~~--~----~~~v~~vD~s~~~~~~a~~~~~ 156 (275)
T 1yb2_A 107 GLRPGMDILEVGVGSGNMSSYILYALN--G----KGTLTVVERDEDNLKKAMDNLS 156 (275)
T ss_dssp CCCTTCEEEEECCTTSHHHHHHHHHHT--T----SSEEEEECSCHHHHHHHHHHHH
T ss_pred CCCCcCEEEEecCCCCHHHHHHHHHcC--C----CCEEEEEECCHHHHHHHHHHHH
Confidence 333446999999999999998887542 1 2379999999999887777664
No 190
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=93.19 E-value=0.19 Score=43.19 Aligned_cols=43 Identities=19% Similarity=0.203 Sum_probs=33.5
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.+|+|+|||+|.++..++..- ..+++.||+|+.+.+.-++++.
T Consensus 56 ~~vLDlgcG~G~~~~~l~~~~--------~~~V~~vD~s~~~l~~a~~~~~ 98 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEALSRY--------AAGATLIEMDRAVSQQLIKNLA 98 (202)
T ss_dssp CEEEETTCTTCHHHHHHHHTT--------CSEEEEECSCHHHHHHHHHHHH
T ss_pred CeEEEeCCCcCHHHHHHHhcC--------CCEEEEEECCHHHHHHHHHHHH
Confidence 489999999999988765421 1269999999999887776654
No 191
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=93.06 E-value=0.12 Score=45.11 Aligned_cols=39 Identities=18% Similarity=0.128 Sum_probs=30.1
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhH
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQ 204 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr 204 (320)
..-+|+|+|||+|+++..+++.+. | ..+++-||+|+.+.
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g--~----~~~v~gvD~s~~~i 115 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVG--P----DGLVYAVEFSHRSG 115 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHC--T----TCEEEEECCCHHHH
T ss_pred CCCEEEEEcccCCHHHHHHHHHhC--C----CcEEEEEECCHHHH
Confidence 345899999999999998887641 1 13689999998753
No 192
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=93.02 E-value=0.21 Score=46.76 Aligned_cols=44 Identities=18% Similarity=0.345 Sum_probs=34.9
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
-+|+|+|||+|.++..+++.. | ..+++.||+|+.+.+.-++++.
T Consensus 198 ~~VLDlGcG~G~~~~~la~~~---~----~~~v~~vD~s~~~l~~a~~~~~ 241 (343)
T 2pjd_A 198 GKVLDVGCGAGVLSVAFARHS---P----KIRLTLCDVSAPAVEASRATLA 241 (343)
T ss_dssp SBCCBTTCTTSHHHHHHHHHC---T----TCBCEEEESBHHHHHHHHHHHH
T ss_pred CeEEEecCccCHHHHHHHHHC---C----CCEEEEEECCHHHHHHHHHHHH
Confidence 489999999999998876642 2 2368999999998877776664
No 193
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=93.00 E-value=0.12 Score=46.99 Aligned_cols=59 Identities=12% Similarity=0.085 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEec-ChhhHHHHHHhc
Q 020840 142 GEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVEC-SPTLQKLQHHNL 211 (320)
Q Consensus 142 Ge~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~-Sp~Lr~~Q~e~L 211 (320)
++.++.++.... ......+|+|+|||+|.++.-+.+. . ..+++.||+ |+.+.+.-++++
T Consensus 64 ~~~l~~~l~~~~---~~~~~~~vLDlG~G~G~~~~~~a~~----~----~~~v~~~D~s~~~~~~~a~~n~ 123 (281)
T 3bzb_A 64 ARALADTLCWQP---ELIAGKTVCELGAGAGLVSIVAFLA----G----ADQVVATDYPDPEILNSLESNI 123 (281)
T ss_dssp HHHHHHHHHHCG---GGTTTCEEEETTCTTSHHHHHHHHT----T----CSEEEEEECSCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcc---hhcCCCeEEEecccccHHHHHHHHc----C----CCEEEEEeCCCHHHHHHHHHHH
Confidence 566777765432 1112348999999999988754431 1 126999999 888877666655
No 194
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=92.91 E-value=0.19 Score=45.94 Aligned_cols=45 Identities=11% Similarity=0.225 Sum_probs=33.8
Q ss_pred CCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhc
Q 020840 159 PNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (320)
Q Consensus 159 p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L 211 (320)
....+|+|+|||+|.++..+++.. |. .+++.+|+| .+.+.-++++
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~---p~----~~~~~~D~~-~~~~~a~~~~ 208 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHN---PN----AEIFGVDWA-SVLEVAKENA 208 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHC---TT----CEEEEEECH-HHHHHHHHHH
T ss_pred CCCCEEEEECCCcCHHHHHHHHHC---CC----CeEEEEecH-HHHHHHHHHH
Confidence 445799999999999998887653 32 479999999 6655555544
No 195
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=92.90 E-value=0.32 Score=43.43 Aligned_cols=42 Identities=21% Similarity=0.265 Sum_probs=33.1
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.+|+|+|||+|.++..+.+. .. +++.||+||...+.-++++.
T Consensus 122 ~~VLDiGcG~G~l~~~la~~--------g~-~v~gvDi~~~~v~~a~~n~~ 163 (254)
T 2nxc_A 122 DKVLDLGTGSGVLAIAAEKL--------GG-KALGVDIDPMVLPQAEANAK 163 (254)
T ss_dssp CEEEEETCTTSHHHHHHHHT--------TC-EEEEEESCGGGHHHHHHHHH
T ss_pred CEEEEecCCCcHHHHHHHHh--------CC-eEEEEECCHHHHHHHHHHHH
Confidence 58999999999998765441 11 79999999999887776654
No 196
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=92.89 E-value=0.089 Score=45.24 Aligned_cols=43 Identities=19% Similarity=0.222 Sum_probs=33.5
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.+|+|+|||+|.++..++.. . ..+++.||+|+.+.+.-++++.
T Consensus 55 ~~vLDlGcGtG~~~~~~~~~---~-----~~~v~gvD~s~~~l~~a~~~~~ 97 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEALSR---Q-----AKKVTFLELDKTVANQLKKNLQ 97 (201)
T ss_dssp CEEEETTCTTCHHHHHHHHT---T-----CSEEEEECSCHHHHHHHHHHHH
T ss_pred CeEEEcCCccCHHHHHHHHc---c-----CCEEEEEECCHHHHHHHHHHHH
Confidence 48999999999998876542 1 1269999999999887776664
No 197
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=92.82 E-value=0.21 Score=45.91 Aligned_cols=70 Identities=16% Similarity=0.225 Sum_probs=44.1
Q ss_pred CCChhHHHHHHH--HHHHH-HHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHh
Q 020840 134 SPEVSQMFGEMV--GVWAM-CLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHN 210 (320)
Q Consensus 134 SpEIsp~FGe~I--A~~i~-~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~ 210 (320)
.|+....|.+.+ ..... .+....+... .+|+|+|||+|.++..+++.. |. .+++.+|+ |.+.+.-+++
T Consensus 139 ~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~---p~----~~~~~~D~-~~~~~~a~~~ 209 (334)
T 2ip2_A 139 CPDAGRRFLLAMKASNLAFHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAE---PS----ARGVMLDR-EGSLGVARDN 209 (334)
T ss_dssp CHHHHHHHHHHHGGGHHHHHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHC---TT----CEEEEEEC-TTCTHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHC---CC----CEEEEeCc-HHHHHHHHHH
Confidence 455555565554 11111 2223334344 699999999999998887653 33 47999999 7776665555
Q ss_pred cc
Q 020840 211 LK 212 (320)
Q Consensus 211 L~ 212 (320)
+.
T Consensus 210 ~~ 211 (334)
T 2ip2_A 210 LS 211 (334)
T ss_dssp TH
T ss_pred Hh
Confidence 53
No 198
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=92.82 E-value=0.18 Score=47.40 Aligned_cols=43 Identities=21% Similarity=0.202 Sum_probs=30.7
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
..+|+|+|||+|.++..+++. + ..+++.||+|+ +.+.-++++.
T Consensus 51 ~~~VLDiGcGtG~ls~~la~~----g----~~~V~~vD~s~-~~~~a~~~~~ 93 (348)
T 2y1w_A 51 DKIVLDVGCGSGILSFFAAQA----G----ARKIYAVEAST-MAQHAEVLVK 93 (348)
T ss_dssp TCEEEEETCTTSHHHHHHHHT----T----CSEEEEEECST-HHHHHHHHHH
T ss_pred cCEEEEcCCCccHHHHHHHhC----C----CCEEEEECCHH-HHHHHHHHHH
Confidence 358999999999998766542 1 23799999997 5454444443
No 199
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=92.63 E-value=0.29 Score=43.91 Aligned_cols=46 Identities=17% Similarity=0.231 Sum_probs=35.3
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
...+|+|+|||+|.++..+... .| ..+++.||+|+...+.-++++.
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~---~~----~~~v~~vD~s~~~~~~a~~~~~ 125 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIV---RP----ELELVLVDATRKKVAFVERAIE 125 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHH---CT----TCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCHHHHHHHHH---CC----CCEEEEEECCHHHHHHHHHHHH
Confidence 4468999999999988776543 23 3479999999998877666554
No 200
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=92.48 E-value=0.29 Score=43.43 Aligned_cols=41 Identities=15% Similarity=0.045 Sum_probs=31.3
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHH
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQK 205 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~ 205 (320)
-+|+|+|||+|..+.-+.+.++.. ....+++-||+|+.+.+
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~---~~~~~V~gvD~s~~~l~ 123 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIM---GIDCQVIGIDRDLSRCQ 123 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHT---TCCCEEEEEESCCTTCC
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhc---CCCCEEEEEeCChHHHH
Confidence 489999999999999887764321 12347999999998743
No 201
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=92.47 E-value=0.13 Score=45.79 Aligned_cols=44 Identities=20% Similarity=0.275 Sum_probs=33.6
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.-+|+|+|||+|.++..+.+. .+ . +++.||+++.+.+.-++++.
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~---~~----~-~v~gvDi~~~~~~~a~~n~~ 93 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTR---TK----A-KIVGVEIQERLADMAKRSVA 93 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTT---CC----C-EEEEECCSHHHHHHHHHHHH
T ss_pred CCEEEEcCCchhHHHHHHHHh---cC----C-cEEEEECCHHHHHHHHHHHH
Confidence 458999999999988765432 11 1 79999999999887666654
No 202
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=92.44 E-value=0.084 Score=47.23 Aligned_cols=60 Identities=13% Similarity=0.120 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHc---CCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 145 VGVWAMCLWEQM---GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 145 IA~~i~~~w~~~---g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
+..|+...+.++ +.....+|+|+|||+|.++.-.+ + +. .-+++.||+|+.+.+.-++.+.
T Consensus 37 ~~~~~~~~~~~~~~~~~~~g~~vLDiGCG~G~~~~~~~---~--~~---~~~v~g~D~s~~~l~~a~~~~~ 99 (263)
T 2a14_A 37 MLKFNLECLHKTFGPGGLQGDTLIDIGSGPTIYQVLAA---C--DS---FQDITLSDFTDRNREELEKWLK 99 (263)
T ss_dssp HHHHHHHHHHHHHSTTSCCEEEEEESSCTTCCGGGTTG---G--GT---EEEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCceEEEeCCCccHHHHHHH---H--hh---hcceeeccccHHHHHHHHHHHh
Confidence 344554444433 33345689999999998653211 1 11 1269999999999887766654
No 203
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=92.42 E-value=0.35 Score=45.60 Aligned_cols=52 Identities=19% Similarity=0.224 Sum_probs=38.3
Q ss_pred HHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 154 EQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 154 ~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
..++....-+|+|+|||.|.++.-++..+ + ..+++-||+||.+.+.-++++.
T Consensus 116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~---~----ga~V~gIDis~~~l~~Ar~~~~ 167 (298)
T 3fpf_A 116 ALGRFRRGERAVFIGGGPLPLTGILLSHV---Y----GMRVNVVEIEPDIAELSRKVIE 167 (298)
T ss_dssp HHTTCCTTCEEEEECCCSSCHHHHHHHHT---T----CCEEEEEESSHHHHHHHHHHHH
T ss_pred HHcCCCCcCEEEEECCCccHHHHHHHHHc---c----CCEEEEEECCHHHHHHHHHHHH
Confidence 34455556799999999998877665432 2 2479999999999887776654
No 204
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=92.38 E-value=0.27 Score=46.27 Aligned_cols=64 Identities=14% Similarity=0.158 Sum_probs=43.4
Q ss_pred cCCChhHHHHHHHHHHHH----HHHHHcC-CCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhH
Q 020840 133 TSPEVSQMFGEMVGVWAM----CLWEQMG-QPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQ 204 (320)
Q Consensus 133 TSpEIsp~FGe~IA~~i~----~~w~~~g-~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr 204 (320)
..|+....|.+.++.+.. .+..... .+...+|+|+|||+|.++..+++.. |. ++++.+|+ |.+.
T Consensus 177 ~~~~~~~~f~~~m~~~~~~~~~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~---~~----~~~~~~D~-~~~~ 245 (372)
T 1fp1_D 177 KDKKMNQIFNKSMVDVCATEMKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKY---PL----IKGINFDL-PQVI 245 (372)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHC---TT----CEEEEEEC-HHHH
T ss_pred hCHHHHHHHHHHHHhhhHHHHHHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHC---CC----CeEEEeCh-HHHH
Confidence 457777778777655432 2233333 3455699999999999999887653 33 47889999 6554
No 205
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=92.31 E-value=0.22 Score=47.15 Aligned_cols=64 Identities=13% Similarity=0.228 Sum_probs=42.9
Q ss_pred cCCChhHHHHHHHHHHHHHHH----HHcC-CCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhH
Q 020840 133 TSPEVSQMFGEMVGVWAMCLW----EQMG-QPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQ 204 (320)
Q Consensus 133 TSpEIsp~FGe~IA~~i~~~w----~~~g-~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr 204 (320)
+-|+....|....+.+-...+ .... .+...+|+|+|||+|.++..+++.. |. ++++.+|. |.+.
T Consensus 171 ~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~---p~----~~~~~~D~-~~~~ 239 (368)
T 3reo_A 171 TDHRINKVFNKGMSSNSTITMKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKY---PS----INAINFDL-PHVI 239 (368)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHC---TT----CEEEEEEC-HHHH
T ss_pred hCHHHHHHHHHHHHhhhhhHHHHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhC---CC----CEEEEEeh-HHHH
Confidence 346777778777665533222 2222 3445699999999999999887753 33 47899998 6543
No 206
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=92.30 E-value=0.16 Score=45.80 Aligned_cols=41 Identities=20% Similarity=0.162 Sum_probs=31.5
Q ss_pred CCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhH
Q 020840 158 QPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQ 204 (320)
Q Consensus 158 ~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr 204 (320)
....-+|+|+|||+|.++..+.+.+.. .-+++-||+||.+.
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~------~G~V~avD~s~~~l 114 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIEL------NGKAYGVEFSPRVV 114 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTT------TSEEEEEECCHHHH
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCC------CCEEEEEECcHHHH
Confidence 334469999999999999988776532 23689999999763
No 207
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=92.18 E-value=0.13 Score=44.95 Aligned_cols=48 Identities=15% Similarity=0.034 Sum_probs=34.2
Q ss_pred CCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 157 GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 157 g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
+.....+|+|+|||+|.++..+.. .. ..+++.||+|+.+.+.-++++.
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~---~~-----~~~v~gvD~s~~~l~~a~~~~~ 100 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSAC---ES-----FTEIIVSDYTDQNLWELQKWLK 100 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGG---GT-----EEEEEEEESCHHHHHHHHHHHT
T ss_pred cccCCCEEEEECCCccHHHHHHhh---cc-----cCeEEEecCCHHHHHHHHHHHh
Confidence 333456899999999987765432 11 1379999999998877666664
No 208
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=92.16 E-value=0.25 Score=49.67 Aligned_cols=74 Identities=18% Similarity=0.229 Sum_probs=54.5
Q ss_pred CCCCCeecCCChhHHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcC-cCc-----ccceeEEEEec
Q 020840 126 GAEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKF-KNF-----TESLHIHLVEC 199 (320)
Q Consensus 126 G~~GDFiTSpEIsp~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~-p~~-----~~~l~y~iVE~ 199 (320)
|+.|-|||+.+|..+..+++. ....-+|++-.||+|.|.....+++++. +.. .....++-+|+
T Consensus 194 g~~GqfyTP~~Vv~lmv~l~~-----------p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~ 262 (530)
T 3ufb_A 194 GDSGEFYTPRPVVRFMVEVMD-----------PQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEA 262 (530)
T ss_dssp SSCCCCCCCHHHHHHHHHHHC-----------CCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECC
T ss_pred CcCceECCcHHHHHHHHHhhc-----------cCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhc
Confidence 678999999999887665531 1122489999999999999999998642 221 22356899999
Q ss_pred ChhhHHHHHHh
Q 020840 200 SPTLQKLQHHN 210 (320)
Q Consensus 200 Sp~Lr~~Q~e~ 210 (320)
.+....+-+-.
T Consensus 263 ~~~~~~la~mN 273 (530)
T 3ufb_A 263 KSLPYLLVQMN 273 (530)
T ss_dssp SHHHHHHHHHH
T ss_pred cHHHHHHHHHH
Confidence 99987766543
No 209
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=92.08 E-value=0.12 Score=48.32 Aligned_cols=64 Identities=17% Similarity=0.270 Sum_probs=40.8
Q ss_pred cCCChhHHHHHHHHHHHHHH---HHHc--CCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhH
Q 020840 133 TSPEVSQMFGEMVGVWAMCL---WEQM--GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQ 204 (320)
Q Consensus 133 TSpEIsp~FGe~IA~~i~~~---w~~~--g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr 204 (320)
..|+....|.+.++.+.... .... +.+...+|+|+|||+|.++..+++. +|. ++++.+|+ |.+.
T Consensus 156 ~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~---~p~----~~~~~~D~-~~~~ 224 (352)
T 1fp2_A 156 KNPEYNTSFNDAMASDSKLINLALRDCDFVFDGLESIVDVGGGTGTTAKIICET---FPK----LKCIVFDR-PQVV 224 (352)
T ss_dssp HCHHHHHHHHHHHHHTHHHHHHHHHTCHHHHTTCSEEEEETCTTSHHHHHHHHH---CTT----CEEEEEEC-HHHH
T ss_pred hChHHHHHHHHHHHhcchhhhhHHHhcccccccCceEEEeCCCccHHHHHHHHH---CCC----CeEEEeeC-HHHH
Confidence 34566666776655433221 2222 1223469999999999999888764 343 47999999 7664
No 210
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=92.00 E-value=0.26 Score=46.24 Aligned_cols=44 Identities=14% Similarity=0.143 Sum_probs=31.2
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
..-+|+|+|||+|.++..+.+. + ..+++.||+|+ +.+.-++++.
T Consensus 64 ~~~~VLDiGcGtG~ls~~la~~----g----~~~v~gvD~s~-~~~~a~~~~~ 107 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAAKA----G----AKKVLGVDQSE-ILYQAMDIIR 107 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT----T----CSEEEEEESST-HHHHHHHHHH
T ss_pred CCCEEEEeeccCcHHHHHHHHc----C----CCEEEEEChHH-HHHHHHHHHH
Confidence 3458999999999998766542 1 23799999998 5554455443
No 211
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=92.00 E-value=0.71 Score=49.45 Aligned_cols=72 Identities=15% Similarity=0.176 Sum_probs=49.0
Q ss_pred CCCCeecCCChhHHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHH
Q 020840 127 AEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKL 206 (320)
Q Consensus 127 ~~GDFiTSpEIsp~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~ 206 (320)
..|.|+|+++|..+..++. ..+. ....+...+|+|.|||+|.|+..+.+.+... ...+++-+|+++.+.+.
T Consensus 293 k~GqFYTP~eLA~lMVeLA-~ill----~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei----~~~~IyGvEIDp~Al~L 363 (878)
T 3s1s_A 293 HEGVVPTDIELGKVLSIIS-QHIL----GRPLTEDEVISDPAAGSGNLLATVSAGFNNV----MPRQIWANDIETLFLEL 363 (878)
T ss_dssp CCBSSSCCHHHHHHHHHHH-HHHH----CSCCCTTCEEEETTCTTSHHHHHHHHTSTTC----CGGGEEEECSCGGGHHH
T ss_pred cCceEcCCHHHHHHHHHHH-hhhc----cccCCCCCEEEECCCCccHHHHHHHHHhccc----CCCeEEEEECCHHHHHH
Confidence 4689999999876655442 1111 1112244699999999999988877655321 23568999999988765
Q ss_pred H
Q 020840 207 Q 207 (320)
Q Consensus 207 Q 207 (320)
-
T Consensus 364 A 364 (878)
T 3s1s_A 364 L 364 (878)
T ss_dssp H
T ss_pred H
Confidence 5
No 212
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=91.98 E-value=0.12 Score=45.69 Aligned_cols=37 Identities=16% Similarity=0.133 Sum_probs=28.1
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecC-hhhHH
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECS-PTLQK 205 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~S-p~Lr~ 205 (320)
-.|+|+|||+|.++..+.+. .| ..+++-||+| +.+.+
T Consensus 26 ~~vLDiGCG~G~~~~~la~~---~~----~~~v~GvD~s~~~ml~ 63 (225)
T 3p2e_A 26 RVHIDLGTGDGRNIYKLAIN---DQ----NTFYIGIDPVKENLFD 63 (225)
T ss_dssp EEEEEETCTTSHHHHHHHHT---CT----TEEEEEECSCCGGGHH
T ss_pred CEEEEEeccCcHHHHHHHHh---CC----CCEEEEEeCCHHHHHH
Confidence 58999999999988876542 22 3479999999 77733
No 213
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=91.93 E-value=0.074 Score=47.26 Aligned_cols=57 Identities=25% Similarity=0.387 Sum_probs=39.9
Q ss_pred CeecCCChhHHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHH
Q 020840 130 DFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKL 206 (320)
Q Consensus 130 DFiTSpEIsp~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~ 206 (320)
.|.+.+.+....-+ .++....-+|+|+|||.|.++..+++.. .+++.||+|+.+.+.
T Consensus 10 ~fl~~~~~~~~i~~-----------~~~~~~~~~VLDiG~G~G~~~~~l~~~~---------~~v~~id~~~~~~~~ 66 (245)
T 1yub_A 10 NFLTSEKVLNQIIK-----------QLNLKETDTVYEIGTGKGHLTTKLAKIS---------KQVTSIELDSHLFNL 66 (245)
T ss_dssp CBCCCTTTHHHHHH-----------HCCCCSSEEEEECSCCCSSCSHHHHHHS---------SEEEESSSSCSSSSS
T ss_pred CCCCCHHHHHHHHH-----------hcCCCCCCEEEEEeCCCCHHHHHHHHhC---------CeEEEEECCHHHHHH
Confidence 48888776433222 2333344689999999999998877641 368999999988643
No 214
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=91.92 E-value=0.11 Score=46.30 Aligned_cols=44 Identities=14% Similarity=0.108 Sum_probs=33.1
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L 211 (320)
-+|+|+|||+|..+..+.+.+. ...+++.||+|+.+.+.-++++
T Consensus 62 ~~VLDiG~G~G~~t~~la~~~~------~~~~v~~iD~~~~~~~~a~~~~ 105 (242)
T 3r3h_A 62 KKVLELGTFTGYSALAMSLALP------DDGQVITCDINEGWTKHAHPYW 105 (242)
T ss_dssp SEEEEEESCCSHHHHHHHHTSC------TTCEEEEEECCCSSCCCSHHHH
T ss_pred CEEEEeeCCcCHHHHHHHHhCC------CCCEEEEEECCHHHHHHHHHHH
Confidence 4899999999999988876542 1347999999998755444444
No 215
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=91.91 E-value=0.61 Score=42.00 Aligned_cols=45 Identities=13% Similarity=0.072 Sum_probs=34.9
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~ 213 (320)
-+|+++|||+|.++.-+... .| ..+++.||++|...+.-++++..
T Consensus 17 ~~VlDIGtGsG~l~i~la~~---~~----~~~V~avDi~~~al~~A~~N~~~ 61 (225)
T 3kr9_A 17 AILLDVGSDHAYLPIELVER---GQ----IKSAIAGEVVEGPYQSAVKNVEA 61 (225)
T ss_dssp EEEEEETCSTTHHHHHHHHT---TS----EEEEEEEESSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHh---CC----CCEEEEEECCHHHHHHHHHHHHH
Confidence 58999999999999877542 12 23689999999988877776653
No 216
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=91.85 E-value=0.097 Score=47.58 Aligned_cols=36 Identities=22% Similarity=0.294 Sum_probs=28.0
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHH
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQK 205 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~ 205 (320)
.-+|+|+|||+|.++..+.+. + .+++-||+|+.+.+
T Consensus 40 ~~~vLDvGcGtG~~~~~l~~~------~---~~v~gvD~s~~ml~ 75 (257)
T 4hg2_A 40 RGDALDCGCGSGQASLGLAEF------F---ERVHAVDPGEAQIR 75 (257)
T ss_dssp SSEEEEESCTTTTTHHHHHTT------C---SEEEEEESCHHHHH
T ss_pred CCCEEEEcCCCCHHHHHHHHh------C---CEEEEEeCcHHhhh
Confidence 358999999999988876542 1 25899999998764
No 217
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=91.52 E-value=0.24 Score=44.24 Aligned_cols=39 Identities=10% Similarity=0.206 Sum_probs=30.2
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHH
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKL 206 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~ 206 (320)
...+|+|+|||+|.++..+++. + ..+++-||+|+.+.+.
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~----g----~~~V~gvDis~~ml~~ 75 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQN----G----AKLVYALDVGTNQLAW 75 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT----T----CSEEEEECSSCCCCCH
T ss_pred CCCEEEEEccCCCHHHHHHHhc----C----CCEEEEEcCCHHHHHH
Confidence 3458999999999998877653 1 1269999999988654
No 218
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=91.12 E-value=0.82 Score=41.37 Aligned_cols=46 Identities=15% Similarity=-0.021 Sum_probs=35.4
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~ 213 (320)
.-+|+++|||+|.++.-+... .| ..+++-||++|...+.-++++..
T Consensus 22 g~~VlDIGtGsG~l~i~la~~---~~----~~~V~AvDi~~~al~~A~~N~~~ 67 (230)
T 3lec_A 22 GARLLDVGSDHAYLPIFLLQM---GY----CDFAIAGEVVNGPYQSALKNVSE 67 (230)
T ss_dssp TEEEEEETCSTTHHHHHHHHT---TC----EEEEEEEESSHHHHHHHHHHHHH
T ss_pred CCEEEEECCchHHHHHHHHHh---CC----CCEEEEEECCHHHHHHHHHHHHH
Confidence 358999999999999876542 11 23689999999998877776653
No 219
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=91.10 E-value=0.52 Score=39.16 Aligned_cols=42 Identities=7% Similarity=0.031 Sum_probs=29.2
Q ss_pred cceEEEecCCchhHHHHHHHHHhcC--cCcccceeEEEEecChh
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKF--KNFTESLHIHLVECSPT 202 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~--p~~~~~l~y~iVE~Sp~ 202 (320)
..+|+|+|||+|.++..+.+.+... +..-...+++.||+|+.
T Consensus 23 ~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~ 66 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHI 66 (196)
T ss_dssp TCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCC
T ss_pred CCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhc
Confidence 4589999999999999887764210 00001147999999984
No 220
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=91.04 E-value=0.47 Score=44.78 Aligned_cols=62 Identities=19% Similarity=0.264 Sum_probs=40.9
Q ss_pred CCChhHHHHHHHHHHHHH----HHHHcC-CCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhh
Q 020840 134 SPEVSQMFGEMVGVWAMC----LWEQMG-QPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTL 203 (320)
Q Consensus 134 SpEIsp~FGe~IA~~i~~----~w~~~g-~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~L 203 (320)
-|+....|....+.+-.. +..... .....+|+|+|||+|.++..+++.. |. ++++.+|. |.+
T Consensus 170 ~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~---p~----~~~~~~D~-~~~ 236 (364)
T 3p9c_A 170 DPRFNRVFNEGMKNHSIIITKKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHY---PT----IKGVNFDL-PHV 236 (364)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHC---TT----CEEEEEEC-HHH
T ss_pred CHHHHHHHHHHHHHhhHHHHHHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHC---CC----CeEEEecC-HHH
Confidence 456666777666554322 222233 3445699999999999999888753 43 46899998 544
No 221
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=90.83 E-value=0.79 Score=41.88 Aligned_cols=46 Identities=7% Similarity=0.043 Sum_probs=35.3
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~ 213 (320)
.-+|+++|||+|.++..+... . ...+++.||++|...+.-++++..
T Consensus 22 g~~VlDIGtGsG~l~i~la~~---~----~~~~V~avDi~~~al~~A~~N~~~ 67 (244)
T 3gnl_A 22 NERIADIGSDHAYLPCFAVKN---Q----TASFAIAGEVVDGPFQSAQKQVRS 67 (244)
T ss_dssp SEEEEEETCSTTHHHHHHHHT---T----SEEEEEEEESSHHHHHHHHHHHHH
T ss_pred CCEEEEECCccHHHHHHHHHh---C----CCCEEEEEECCHHHHHHHHHHHHH
Confidence 358999999999999876542 1 123689999999998877776653
No 222
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=90.73 E-value=0.41 Score=45.57 Aligned_cols=45 Identities=16% Similarity=0.210 Sum_probs=32.4
Q ss_pred CCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 159 PNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 159 p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
....+|+|+|||+|.++..+++. . ..+++.||+| .+.+.-++++.
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~----g----~~~V~gvD~s-~~~~~a~~~~~ 106 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQA----G----ARKVYAVEAT-KMADHARALVK 106 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHT----T----CSEEEEEESS-TTHHHHHHHHH
T ss_pred CCCCEEEEeccCcCHHHHHHHhc----C----CCEEEEEccH-HHHHHHHHHHH
Confidence 34469999999999998876653 1 1279999999 66555555554
No 223
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=90.71 E-value=0.26 Score=47.79 Aligned_cols=46 Identities=15% Similarity=0.296 Sum_probs=38.1
Q ss_pred CCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 159 PNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 159 p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
|.+.+|+++|+|.|.++..+++. + ..++++||++|.+.+.-++.+.
T Consensus 187 p~pkrVL~IGgG~G~~arellk~----~----~~~Vt~VEID~~vie~Ar~~~~ 232 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKL----K----PKMVTMVEIDQMVIDGCKKYMR 232 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTT----C----CSEEEEEESCHHHHHHHHHHCC
T ss_pred CCCCEEEEEECChhHHHHHHHHC----C----CCEEEEEECCHHHHHHHHHHHH
Confidence 55679999999999998887753 2 1369999999999999888875
No 224
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=90.65 E-value=0.44 Score=44.16 Aligned_cols=44 Identities=7% Similarity=-0.016 Sum_probs=36.1
Q ss_pred CCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 159 PNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 159 p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
+.+-+|+|+|||.|-|+.-+. ...+|+.+|+++.+.+.-++.+.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~----------~~~~y~a~DId~~~i~~ar~~~~ 147 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER----------GIASVWGCDIHQGLGDVITPFAR 147 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT----------TCSEEEEEESBHHHHHHHHHHHH
T ss_pred CCCCeEEEecCCccHHHHHhc----------cCCeEEEEeCCHHHHHHHHHHHH
Confidence 345699999999999998765 23579999999999988777664
No 225
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=90.65 E-value=0.55 Score=43.87 Aligned_cols=50 Identities=8% Similarity=0.030 Sum_probs=37.4
Q ss_pred CCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 157 GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 157 g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
+....-.|+|+|||+|+++..+..... | ..+++-+|+|+.+.+.-++++.
T Consensus 200 ~~~~~~~vLD~gcGsG~~~ie~a~~~~--~----~~~v~g~Di~~~~i~~a~~n~~ 249 (354)
T 3tma_A 200 DARPGMRVLDPFTGSGTIALEAASTLG--P----TSPVYAGDLDEKRLGLAREAAL 249 (354)
T ss_dssp TCCTTCCEEESSCTTSHHHHHHHHHHC--T----TSCEEEEESCHHHHHHHHHHHH
T ss_pred CCCCCCEEEeCCCCcCHHHHHHHHhhC--C----CceEEEEECCHHHHHHHHHHHH
Confidence 433445899999999999887766541 1 2368999999999887777664
No 226
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=90.44 E-value=0.31 Score=45.52 Aligned_cols=63 Identities=17% Similarity=0.216 Sum_probs=39.4
Q ss_pred cCCChhH--HHHHHHHHHHH---HHHHHc--CCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhh
Q 020840 133 TSPEVSQ--MFGEMVGVWAM---CLWEQM--GQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTL 203 (320)
Q Consensus 133 TSpEIsp--~FGe~IA~~i~---~~w~~~--g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~L 203 (320)
..|+... .|.+.++.+.. .+.... +.....+|+|+|||+|.++..+++.. |. ++++.+|. |.+
T Consensus 159 ~~p~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~---p~----~~~~~~D~-~~~ 228 (358)
T 1zg3_A 159 KDSESSTLSMFQDAMASDSRMFKLVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIF---PH----LKCTVFDQ-PQV 228 (358)
T ss_dssp SGGGHHHHHHHHHHHHHHHHTHHHHHHHTHHHHHTCSEEEEETCTTSHHHHHHHHHC---TT----SEEEEEEC-HHH
T ss_pred cChhhhhHHHHHHHHhcccHHHHHHHHhcchhccCCCEEEEECCCcCHHHHHHHHHC---CC----CeEEEecc-HHH
Confidence 3466666 77666554321 122222 11123589999999999999887653 33 46889998 544
No 227
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=90.42 E-value=0.93 Score=43.53 Aligned_cols=67 Identities=12% Similarity=0.046 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhc-CcCc------------------------------ccc
Q 020840 143 EMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASK-FKNF------------------------------TES 191 (320)
Q Consensus 143 e~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~-~p~~------------------------------~~~ 191 (320)
|.||..++. ..+......|++.|||+|+++........+ .|.+ ...
T Consensus 181 e~lAa~ll~---~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 257 (385)
T 3ldu_A 181 ETLAAGLIY---LTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESK 257 (385)
T ss_dssp HHHHHHHHH---TSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCC
T ss_pred HHHHHHHHH---hhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCC
Confidence 445555442 234444468999999999998777655432 1211 012
Q ss_pred eeEEEEecChhhHHHHHHhcc
Q 020840 192 LHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 192 l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.+++-+|+++.+.+.-++++.
T Consensus 258 ~~V~GvDid~~ai~~Ar~Na~ 278 (385)
T 3ldu_A 258 FKIYGYDIDEESIDIARENAE 278 (385)
T ss_dssp CCEEEEESCHHHHHHHHHHHH
T ss_pred ceEEEEECCHHHHHHHHHHHH
Confidence 469999999999887777664
No 228
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=90.31 E-value=0.43 Score=44.87 Aligned_cols=44 Identities=14% Similarity=0.303 Sum_probs=34.2
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.-+|+|+|||+|.++..+++. +|. ++++.+|+ |.+.+.-++++.
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~---~p~----~~~~~~D~-~~~~~~a~~~~~ 223 (363)
T 3dp7_A 180 PKRLLDIGGNTGKWATQCVQY---NKE----VEVTIVDL-PQQLEMMRKQTA 223 (363)
T ss_dssp CSEEEEESCTTCHHHHHHHHH---STT----CEEEEEEC-HHHHHHHHHHHT
T ss_pred CCEEEEeCCCcCHHHHHHHHh---CCC----CEEEEEeC-HHHHHHHHHHHH
Confidence 359999999999999988775 343 47999999 777666666554
No 229
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=90.11 E-value=1 Score=40.65 Aligned_cols=68 Identities=16% Similarity=0.108 Sum_probs=47.7
Q ss_pred CCCeecCCChhHHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHH
Q 020840 128 EGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQ 207 (320)
Q Consensus 128 ~GDFiTSpEIsp~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q 207 (320)
.|-|++-.+.+++-.+++ +....-+|+|+|||.|..+..+...+.. ..+++-||+|+...+.-
T Consensus 62 ~G~~~~qd~~s~l~~~~l-----------~~~~g~~VLDlgaG~G~~t~~la~~~~~------~~~v~avD~~~~~l~~~ 124 (274)
T 3ajd_A 62 FGYYMPQSISSMIPPIVL-----------NPREDDFILDMCAAPGGKTTHLAQLMKN------KGTIVAVEISKTRTKAL 124 (274)
T ss_dssp TTSEEECCSGGGHHHHHH-----------CCCTTCEEEETTCTTCHHHHHHHHHTTT------CSEEEEEESCHHHHHHH
T ss_pred CCeEEEeCHHHHHHHHHh-----------CCCCcCEEEEeCCCccHHHHHHHHHcCC------CCEEEEECCCHHHHHHH
Confidence 677877777766544332 2222358999999999999988775421 24799999999987766
Q ss_pred HHhcc
Q 020840 208 HHNLK 212 (320)
Q Consensus 208 ~e~L~ 212 (320)
++++.
T Consensus 125 ~~~~~ 129 (274)
T 3ajd_A 125 KSNIN 129 (274)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66554
No 230
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=90.10 E-value=0.36 Score=44.94 Aligned_cols=42 Identities=17% Similarity=0.237 Sum_probs=29.8
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.+|+|+|||+|.++..+.+. + ..+++.||+|+ +.+.-++++.
T Consensus 40 ~~VLDiGcGtG~ls~~la~~----g----~~~v~~vD~s~-~~~~a~~~~~ 81 (328)
T 1g6q_1 40 KIVLDVGCGTGILSMFAAKH----G----AKHVIGVDMSS-IIEMAKELVE 81 (328)
T ss_dssp CEEEEETCTTSHHHHHHHHT----C----CSEEEEEESST-HHHHHHHHHH
T ss_pred CEEEEecCccHHHHHHHHHC----C----CCEEEEEChHH-HHHHHHHHHH
Confidence 48999999999998765542 2 13799999996 5444444443
No 231
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=90.03 E-value=1.9 Score=41.58 Aligned_cols=67 Identities=13% Similarity=0.065 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhc-CcCc------------------------------ccc
Q 020840 143 EMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASK-FKNF------------------------------TES 191 (320)
Q Consensus 143 e~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~-~p~~------------------------------~~~ 191 (320)
|.||..++. ..+......|++.|||+||++........+ .|.+ -..
T Consensus 187 e~lAa~ll~---l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 263 (393)
T 3k0b_A 187 ETMAAALVL---LTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQP 263 (393)
T ss_dssp HHHHHHHHH---HSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCC
T ss_pred HHHHHHHHH---HhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCC
Confidence 445555442 244444468999999999998665544332 1211 012
Q ss_pred eeEEEEecChhhHHHHHHhcc
Q 020840 192 LHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 192 l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.+++-+|+|+.+.+.-++++.
T Consensus 264 ~~V~GvDid~~al~~Ar~Na~ 284 (393)
T 3k0b_A 264 LNIIGGDIDARLIEIAKQNAV 284 (393)
T ss_dssp CCEEEEESCHHHHHHHHHHHH
T ss_pred ceEEEEECCHHHHHHHHHHHH
Confidence 469999999999887777664
No 232
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=89.97 E-value=0.77 Score=49.49 Aligned_cols=87 Identities=18% Similarity=0.119 Sum_probs=51.8
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccccccCCcCcccchhhhcccCCCCeEee-c
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKCMDENNANDNVEERTISSLAGTPVSWH-A 240 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~~~~~~~~~~~~~~~~~~~~~~~i~W~-~ 240 (320)
.+|+|+|||+|.++..+.+. .+ ...+++-||+|+.+.+.-++++....... . .....+.+. .
T Consensus 723 ~rVLDVGCGTG~lai~LAr~---g~---p~a~VtGVDIS~emLe~AReRLa~~lnAk-r----------~gl~nVefiqG 785 (950)
T 3htx_A 723 STLVDFGCGSGSLLDSLLDY---PT---SLQTIIGVDISPKGLARAAKMLHVKLNKE-A----------CNVKSATLYDG 785 (950)
T ss_dssp SEEEEETCSSSHHHHHHTSS---CC---CCCEEEEEESCHHHHHHHHHHHHHHTTTT-C----------SSCSEEEEEES
T ss_pred CEEEEECCCCCHHHHHHHHh---CC---CCCeEEEEECCHHHHHHHHHHhhhccchh-h----------cCCCceEEEEC
Confidence 58999999999988766432 11 12379999999999887777664311000 0 000124332 2
Q ss_pred ccccCCC--CCCEEEEEecccccccce
Q 020840 241 ALEQVPS--GFPTIIVAHEFYDALPVH 265 (320)
Q Consensus 241 sleelp~--~~~~~iiANE~fDALPv~ 265 (320)
++.+++. +..-+|++++++.-+|-.
T Consensus 786 Da~dLp~~d~sFDlVV~~eVLeHL~dp 812 (950)
T 3htx_A 786 SILEFDSRLHDVDIGTCLEVIEHMEED 812 (950)
T ss_dssp CTTSCCTTSCSCCEEEEESCGGGSCHH
T ss_pred chHhCCcccCCeeEEEEeCchhhCChH
Confidence 2333332 223578888988888843
No 233
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=89.91 E-value=0.9 Score=43.91 Aligned_cols=41 Identities=17% Similarity=0.294 Sum_probs=27.2
Q ss_pred eEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 163 NLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 163 ~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.|+++|||+|.|+.-..++ .+-+++-||.|+ +.+.-++.+.
T Consensus 86 ~VLDvG~GtGiLs~~Aa~a--------GA~~V~ave~s~-~~~~a~~~~~ 126 (376)
T 4hc4_A 86 TVLDVGAGTGILSIFCAQA--------GARRVYAVEASA-IWQQAREVVR 126 (376)
T ss_dssp EEEEETCTTSHHHHHHHHT--------TCSEEEEEECST-THHHHHHHHH
T ss_pred EEEEeCCCccHHHHHHHHh--------CCCEEEEEeChH-HHHHHHHHHH
Confidence 7999999999886433221 123689999998 4444444443
No 234
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=89.59 E-value=0.42 Score=44.91 Aligned_cols=41 Identities=17% Similarity=0.318 Sum_probs=29.6
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L 211 (320)
.+|+|+|||+|.++..+++. + ..+++-||+|+ +.+.-++++
T Consensus 68 ~~VLDvGcG~G~~~~~la~~----g----~~~v~gvD~s~-~l~~a~~~~ 108 (349)
T 3q7e_A 68 KVVLDVGSGTGILCMFAAKA----G----ARKVIGIECSS-ISDYAVKIV 108 (349)
T ss_dssp CEEEEESCTTSHHHHHHHHT----T----CSEEEEEECST-HHHHHHHHH
T ss_pred CEEEEEeccchHHHHHHHHC----C----CCEEEEECcHH-HHHHHHHHH
Confidence 58999999999998776653 2 23799999997 444434434
No 235
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=89.53 E-value=0.96 Score=41.06 Aligned_cols=44 Identities=14% Similarity=0.155 Sum_probs=32.6
Q ss_pred ceEEEecCCc---hhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGR---GTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~---GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
-+|+|+|||. |.++.-+.+ ..|. .+++-||.||.+.+.-++++.
T Consensus 79 ~~vLDlGcG~pt~G~~~~~~~~---~~p~----~~v~~vD~sp~~l~~Ar~~~~ 125 (274)
T 2qe6_A 79 SQFLDLGSGLPTVQNTHEVAQS---VNPD----ARVVYVDIDPMVLTHGRALLA 125 (274)
T ss_dssp CEEEEETCCSCCSSCHHHHHHH---HCTT----CEEEEEESSHHHHHHHHHHHT
T ss_pred CEEEEECCCCCCCChHHHHHHH---hCCC----CEEEEEECChHHHHHHHHhcC
Confidence 4899999999 987543322 2333 479999999999887777664
No 236
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=89.16 E-value=0.81 Score=39.41 Aligned_cols=57 Identities=21% Similarity=0.302 Sum_probs=37.4
Q ss_pred CChhHHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchh-HHHHHHHHHhcCcCcccceeEEEEecChhhHH
Q 020840 135 PEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGT-LMADLLRGASKFKNFTESLHIHLVECSPTLQK 205 (320)
Q Consensus 135 pEIsp~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~Gt-La~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~ 205 (320)
|+-+.| -|.||.||.+.+ . .+-++||+|+|+|. .|.-+-+. ..+.+..+|+||.-..
T Consensus 16 ~~~~~m-~e~LaeYI~~~~---~--~~~rVlEVG~G~g~~vA~~La~~--------~g~~V~atDInp~Av~ 73 (153)
T 2k4m_A 16 PRGSHM-WNDLAVYIIRCS---G--PGTRVVEVGAGRFLYVSDYIRKH--------SKVDLVLTDIKPSHGG 73 (153)
T ss_dssp CCCCHH-HHHHHHHHHHHS---C--SSSEEEEETCTTCCHHHHHHHHH--------SCCEEEEECSSCSSTT
T ss_pred cchhhH-HHHHHHHHHhcC---C--CCCcEEEEccCCChHHHHHHHHh--------CCCeEEEEECCccccc
Confidence 455667 778999986543 2 23589999999995 66544321 1235788888876443
No 237
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=88.99 E-value=0.92 Score=47.82 Aligned_cols=63 Identities=22% Similarity=0.328 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCc------CcccceeEEEEecChhh
Q 020840 139 QMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFK------NFTESLHIHLVECSPTL 203 (320)
Q Consensus 139 p~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p------~~~~~l~y~iVE~Sp~L 203 (320)
..|-++|...+.+.... ......|+++|||||-|..-.+++.+... ....+.+++.||.||..
T Consensus 390 ~~Y~~AI~~al~d~~~~--~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A 458 (745)
T 3ua3_A 390 DVYGEAVVGALKDLGAD--GRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNA 458 (745)
T ss_dssp HHHHHHHHHHHHHHHTT--CCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHH
T ss_pred HHHHHHHHHHHHHhhcc--cCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHH
Confidence 34455555544332211 11346899999999999877777764211 12245689999999843
No 238
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=88.91 E-value=0.48 Score=42.49 Aligned_cols=45 Identities=13% Similarity=0.132 Sum_probs=30.9
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
...+|+|+|||+|.++. +. ...+ ..+++-||+|+.+.+.-++++.
T Consensus 71 ~~~~vLDiGcG~G~~~~--l~--~~~~----~~~v~gvD~s~~~l~~a~~~~~ 115 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQL--LS--ACSH----FEDITMTDFLEVNRQELGRWLQ 115 (289)
T ss_dssp CCSEEEEETCTTCCGGG--TT--GGGG----CSEEEEECSCHHHHHHHHHHHT
T ss_pred CCCeEEEECCCcChHHH--Hh--hccC----CCeEEEeCCCHHHHHHHHHHHh
Confidence 34689999999999432 11 1111 1379999999999887666554
No 239
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=88.91 E-value=2.3 Score=41.01 Aligned_cols=67 Identities=13% Similarity=0.086 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhc-CcCc------------------------------ccc
Q 020840 143 EMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASK-FKNF------------------------------TES 191 (320)
Q Consensus 143 e~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~-~p~~------------------------------~~~ 191 (320)
|.||..++. ..+....-.|++.+||+||++........+ .|.+ -..
T Consensus 180 e~LAaall~---l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 256 (384)
T 3ldg_A 180 ENMAAAIIL---LSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQ 256 (384)
T ss_dssp HHHHHHHHH---HTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCC
T ss_pred HHHHHHHHH---HhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCC
Confidence 445555443 234434468999999999998766544332 1211 012
Q ss_pred eeEEEEecChhhHHHHHHhcc
Q 020840 192 LHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 192 l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.+++-+|+|+.+.+.-++++.
T Consensus 257 ~~v~GvDid~~al~~Ar~Na~ 277 (384)
T 3ldg_A 257 LDISGFDFDGRMVEIARKNAR 277 (384)
T ss_dssp CCEEEEESCHHHHHHHHHHHH
T ss_pred ceEEEEECCHHHHHHHHHHHH
Confidence 469999999999887777664
No 240
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=88.89 E-value=0.34 Score=41.59 Aligned_cols=37 Identities=24% Similarity=0.249 Sum_probs=28.7
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHh
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHN 210 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~ 210 (320)
..+|+|+|||+|.++..++. . +.||+|+.+.+.-+++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~----------~---~~vD~s~~~~~~a~~~ 84 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKI----------K---IGVEPSERMAEIARKR 84 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTC----------C---EEEESCHHHHHHHHHT
T ss_pred CCcEEEeCCCCCHHHHHHHH----------H---hccCCCHHHHHHHHhc
Confidence 45899999999998876532 1 8899999987765553
No 241
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=88.33 E-value=1 Score=42.12 Aligned_cols=45 Identities=13% Similarity=0.203 Sum_probs=37.1
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~ 213 (320)
-.|+|+|||+|.++..+++.+ | ..+++-||+|+.+.+.-++++..
T Consensus 28 ~~vLD~g~G~G~~s~~la~~~---~----~~~VigvD~d~~al~~A~~~~~~ 72 (301)
T 1m6y_A 28 KIILDCTVGEGGHSRAILEHC---P----GCRIIGIDVDSEVLRIAEEKLKE 72 (301)
T ss_dssp CEEEETTCTTSHHHHHHHHHC---T----TCEEEEEESCHHHHHHHHHHTGG
T ss_pred CEEEEEeCCcCHHHHHHHHHC---C----CCEEEEEECCHHHHHHHHHHHHh
Confidence 589999999999999988764 2 23689999999998887777754
No 242
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=88.30 E-value=0.62 Score=46.20 Aligned_cols=42 Identities=19% Similarity=0.159 Sum_probs=29.8
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L 211 (320)
..+|+|+|||+|.++.-+.+ .+ ..+++.||+|+ +.+.-++++
T Consensus 159 ~~~VLDiGcGtG~la~~la~----~~----~~~V~gvD~s~-~l~~A~~~~ 200 (480)
T 3b3j_A 159 DKIVLDVGCGSGILSFFAAQ----AG----ARKIYAVEAST-MAQHAEVLV 200 (480)
T ss_dssp TCEEEEESCSTTHHHHHHHH----TT----CSEEEEEECHH-HHHHHHHHH
T ss_pred CCEEEEecCcccHHHHHHHH----cC----CCEEEEEEcHH-HHHHHHHHH
Confidence 35899999999998875543 22 23799999999 544444444
No 243
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=88.05 E-value=0.49 Score=42.84 Aligned_cols=45 Identities=22% Similarity=0.243 Sum_probs=35.2
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.-+|+|+|||+|+++..+.+.. + ..+++.||+||.+.+.-++++.
T Consensus 120 ~~~VLDlgcG~G~~s~~la~~~---~----~~~V~~vD~s~~av~~a~~n~~ 164 (272)
T 3a27_A 120 NEVVVDMFAGIGYFTIPLAKYS---K----PKLVYAIEKNPTAYHYLCENIK 164 (272)
T ss_dssp TCEEEETTCTTTTTHHHHHHHT---C----CSEEEEEECCHHHHHHHHHHHH
T ss_pred CCEEEEecCcCCHHHHHHHHhC---C----CCEEEEEeCCHHHHHHHHHHHH
Confidence 3589999999999998876643 1 2369999999998877666554
No 244
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=87.89 E-value=1.4 Score=41.33 Aligned_cols=42 Identities=12% Similarity=0.033 Sum_probs=33.4
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.+|+|+|||+|.++..+++. .. +++.||+|+.+.+.-++++.
T Consensus 155 ~~VLDlgcGtG~~sl~la~~--------ga-~V~~VD~s~~al~~a~~n~~ 196 (332)
T 2igt_A 155 LKVLNLFGYTGVASLVAAAA--------GA-EVTHVDASKKAIGWAKENQV 196 (332)
T ss_dssp CEEEEETCTTCHHHHHHHHT--------TC-EEEEECSCHHHHHHHHHHHH
T ss_pred CcEEEcccccCHHHHHHHHc--------CC-EEEEEECCHHHHHHHHHHHH
Confidence 48999999999999877652 12 69999999998877666553
No 245
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=87.66 E-value=0.45 Score=43.15 Aligned_cols=43 Identities=19% Similarity=0.205 Sum_probs=33.8
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
-+|+|+|||+|.++..+.+.. .. +++-||+||.+.+.-++++.
T Consensus 127 ~~VLDlgcG~G~~~~~la~~~-------~~-~V~~vD~s~~~~~~a~~n~~ 169 (278)
T 2frn_A 127 ELVVDMFAGIGHLSLPIAVYG-------KA-KVIAIEKDPYTFKFLVENIH 169 (278)
T ss_dssp CEEEETTCTTTTTHHHHHHHT-------CC-EEEEECCCHHHHHHHHHHHH
T ss_pred CEEEEecccCCHHHHHHHHhC-------CC-EEEEEECCHHHHHHHHHHHH
Confidence 489999999999998876642 11 68999999998876666554
No 246
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=87.65 E-value=1.1 Score=43.39 Aligned_cols=59 Identities=17% Similarity=0.147 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 142 GEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 142 Ge~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.+.+..++.+.. +....-+|+|+|||+|+++..+.+. ..+++-||+|+.+.+.-++++.
T Consensus 271 ~e~l~~~~~~~l---~~~~~~~VLDlgcG~G~~~~~la~~---------~~~V~gvD~s~~al~~A~~n~~ 329 (433)
T 1uwv_A 271 NQKMVARALEWL---DVQPEDRVLDLFCGMGNFTLPLATQ---------AASVVGVEGVPALVEKGQQNAR 329 (433)
T ss_dssp HHHHHHHHHHHH---TCCTTCEEEEESCTTTTTHHHHHTT---------SSEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh---cCCCCCEEEECCCCCCHHHHHHHhh---------CCEEEEEeCCHHHHHHHHHHHH
Confidence 444445554333 2223358999999999999876542 2369999999998776666553
No 247
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=87.59 E-value=0.71 Score=42.36 Aligned_cols=58 Identities=14% Similarity=0.075 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccc
Q 020840 143 EMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (320)
Q Consensus 143 e~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~ 213 (320)
..|...++... ..+. -.|++++||+||++...++. .-+++.||++|...+.-++++..
T Consensus 222 ~~l~~~~i~~~---~~~~-~~vlD~f~GsGt~~~~a~~~---------g~~~~g~e~~~~~~~~a~~r~~~ 279 (297)
T 2zig_A 222 LELAERLVRMF---SFVG-DVVLDPFAGTGTTLIAAARW---------GRRALGVELVPRYAQLAKERFAR 279 (297)
T ss_dssp HHHHHHHHHHH---CCTT-CEEEETTCTTTHHHHHHHHT---------TCEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh---CCCC-CEEEECCCCCCHHHHHHHHc---------CCeEEEEeCCHHHHHHHHHHHHH
Confidence 34445554443 2333 38999999999998876542 12699999999999888887754
No 248
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=87.55 E-value=0.54 Score=39.89 Aligned_cols=31 Identities=13% Similarity=0.279 Sum_probs=25.0
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChh
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPT 202 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~ 202 (320)
...+|+|+|||+|.++..+ ..+++.||+|+.
T Consensus 67 ~~~~vLDiG~G~G~~~~~l------------~~~v~~~D~s~~ 97 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSI------------RNPVHCFDLASL 97 (215)
T ss_dssp TTSCEEEETCTTCHHHHHC------------CSCEEEEESSCS
T ss_pred CCCeEEEECCcCCHHHHHh------------hccEEEEeCCCC
Confidence 3458999999999987755 136899999987
No 249
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=87.12 E-value=0.78 Score=39.30 Aligned_cols=44 Identities=14% Similarity=0.120 Sum_probs=30.3
Q ss_pred HHHHHHcCC-CCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChh
Q 020840 150 MCLWEQMGQ-PNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPT 202 (320)
Q Consensus 150 ~~~w~~~g~-p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~ 202 (320)
.++.++.+. ....+|+|+|||+|.++..+.+. ..+++-||+||.
T Consensus 14 ~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~---------~~~V~gvD~~~~ 58 (191)
T 3dou_A 14 EFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL---------ARKIISIDLQEM 58 (191)
T ss_dssp HHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT---------CSEEEEEESSCC
T ss_pred HHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc---------CCcEEEEecccc
Confidence 344444432 23468999999999988876542 246889999985
No 250
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=86.29 E-value=4.7 Score=37.68 Aligned_cols=71 Identities=13% Similarity=0.154 Sum_probs=41.5
Q ss_pred CCChhHHHHHHHHHHHH----HHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHH
Q 020840 134 SPEVSQMFGEMVGVWAM----CLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHH 209 (320)
Q Consensus 134 SpEIsp~FGe~IA~~i~----~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e 209 (320)
.|+....|....+.... .+......+..-+||++|||+|.++..|++. +|+ ++.++.|. |...+.-++
T Consensus 149 ~~~~~~~f~~aM~~~~~~~~~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~---~p~----~~~~~~dl-p~v~~~a~~ 220 (353)
T 4a6d_A 149 SEGERLQFMQALQEVWSVNGRSVLTAFDLSVFPLMCDLGGGAGALAKECMSL---YPG----CKITVFDI-PEVVWTAKQ 220 (353)
T ss_dssp SHHHHHHHHHHHHTTHHHHHHHHHHSSCGGGCSEEEEETCTTSHHHHHHHHH---CSS----CEEEEEEC-HHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCeEEeeCCCCCHHHHHHHHh---CCC----ceeEeccC-HHHHHHHHH
Confidence 34445556554432211 1222223333348999999999999888764 454 46777776 555555555
Q ss_pred hcc
Q 020840 210 NLK 212 (320)
Q Consensus 210 ~L~ 212 (320)
.+.
T Consensus 221 ~~~ 223 (353)
T 4a6d_A 221 HFS 223 (353)
T ss_dssp HSC
T ss_pred hhh
Confidence 553
No 251
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=86.22 E-value=1.1 Score=40.72 Aligned_cols=42 Identities=21% Similarity=0.196 Sum_probs=32.4
Q ss_pred CcceEEEecCCchhHHHHHHHHH---hc-CcCc-ccceeEEEEecCh
Q 020840 160 NRVNLVELGPGRGTLMADLLRGA---SK-FKNF-TESLHIHLVECSP 201 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l---~~-~p~~-~~~l~y~iVE~Sp 201 (320)
..++|+|+|.|+|..+.-+++.+ ++ .|+- ...++|+-||..|
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p 106 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFP 106 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSC
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCc
Confidence 45799999999999999988876 22 4532 1247899999987
No 252
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=85.03 E-value=0.64 Score=43.70 Aligned_cols=48 Identities=17% Similarity=0.160 Sum_probs=37.6
Q ss_pred CCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccc
Q 020840 159 PNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (320)
Q Consensus 159 p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~ 213 (320)
+.+-+|+++|||.|-|+.-++. .....+|+.+|+++.+.+.-++++..
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~-------~~p~a~y~a~DId~~~le~a~~~l~~ 178 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMG-------LPAETVYIASDIDARLVGFVDEALTR 178 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTT-------CCTTCEEEEEESBHHHHHHHHHHHHH
T ss_pred CCCceeeeeccCccHHHHHHHh-------hCCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 3456999999999999876543 12345899999999999988887753
No 253
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=84.98 E-value=1.5 Score=42.82 Aligned_cols=42 Identities=12% Similarity=0.249 Sum_probs=33.1
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
-+|+|+|||+|+++.-+.+. ..+++-||+|+.+.+.-++++.
T Consensus 292 ~~VLDlgcG~G~~sl~la~~---------~~~V~gvD~s~~ai~~A~~n~~ 333 (425)
T 2jjq_A 292 EKILDMYSGVGTFGIYLAKR---------GFNVKGFDSNEFAIEMARRNVE 333 (425)
T ss_dssp SEEEEETCTTTHHHHHHHHT---------TCEEEEEESCHHHHHHHHHHHH
T ss_pred CEEEEeeccchHHHHHHHHc---------CCEEEEEECCHHHHHHHHHHHH
Confidence 48999999999999876542 1269999999999876666553
No 254
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=84.71 E-value=1.4 Score=41.09 Aligned_cols=46 Identities=9% Similarity=0.162 Sum_probs=32.4
Q ss_pred HHHcCCC-CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHH
Q 020840 153 WEQMGQP-NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKL 206 (320)
Q Consensus 153 w~~~g~p-~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~ 206 (320)
.+.++.. ....++|+|||+|.++..+++. + .-+++-||+|+.+-+.
T Consensus 77 l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~----g----a~~V~aVDvs~~mL~~ 123 (291)
T 3hp7_A 77 LAVFNLSVEDMITIDIGASTGGFTDVMLQN----G----AKLVYAVDVGTNQLVW 123 (291)
T ss_dssp HHHTTCCCTTCEEEEETCTTSHHHHHHHHT----T----CSEEEEECSSSSCSCH
T ss_pred HHhcCCCccccEEEecCCCccHHHHHHHhC----C----CCEEEEEECCHHHHHH
Confidence 3444432 3458999999999999776652 1 2368999999987543
No 255
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=84.48 E-value=5 Score=41.66 Aligned_cols=67 Identities=16% Similarity=0.130 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhc-CcCccc-------------------------------
Q 020840 143 EMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASK-FKNFTE------------------------------- 190 (320)
Q Consensus 143 e~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~-~p~~~~------------------------------- 190 (320)
|.||..++.. .+......|++.+||+||++......... .|.+..
T Consensus 176 e~LAa~ll~~---~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~ 252 (703)
T 3v97_A 176 ETLAAAIVMR---SGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGL 252 (703)
T ss_dssp HHHHHHHHHH---TTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh---hCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhcc
Confidence 4555555432 34434458999999999998766554322 232211
Q ss_pred ---ceeEEEEecChhhHHHHHHhcc
Q 020840 191 ---SLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 191 ---~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
..+++-+|++|.+.+.-++++.
T Consensus 253 ~~~~~~i~G~Did~~av~~A~~N~~ 277 (703)
T 3v97_A 253 AEYSSHFYGSDSDARVIQRARTNAR 277 (703)
T ss_dssp HHCCCCEEEEESCHHHHHHHHHHHH
T ss_pred ccCCccEEEEECCHHHHHHHHHHHH
Confidence 1579999999999887777664
No 256
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=84.15 E-value=2.1 Score=39.62 Aligned_cols=46 Identities=11% Similarity=0.030 Sum_probs=35.7
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.-+|+|+|||.|..+..+.+.+. ...+++-||+|+...+.-++++.
T Consensus 119 g~~VLDlg~G~G~~t~~la~~~~------~~~~v~avD~s~~~l~~a~~~~~ 164 (315)
T 1ixk_A 119 GEIVADMAAAPGGKTSYLAQLMR------NDGVIYAFDVDENRLRETRLNLS 164 (315)
T ss_dssp TCEEEECCSSCSHHHHHHHHHTT------TCSEEEEECSCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHhC------CCCEEEEEcCCHHHHHHHHHHHH
Confidence 35899999999999998877542 12469999999998776666554
No 257
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=82.70 E-value=2 Score=40.63 Aligned_cols=42 Identities=21% Similarity=0.187 Sum_probs=31.7
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
-.|+|+|||+|+++.-+.+ . .-+++-||+|+.+.+.-++++.
T Consensus 215 ~~vLDl~cG~G~~~l~la~---~------~~~V~gvd~~~~ai~~a~~n~~ 256 (369)
T 3bt7_A 215 GDLLELYCGNGNFSLALAR---N------FDRVLATEIAKPSVAAAQYNIA 256 (369)
T ss_dssp SEEEEESCTTSHHHHHHGG---G------SSEEEEECCCHHHHHHHHHHHH
T ss_pred CEEEEccCCCCHHHHHHHh---c------CCEEEEEECCHHHHHHHHHHHH
Confidence 3799999999999975432 1 1268999999998876666553
No 258
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=81.25 E-value=3.5 Score=38.65 Aligned_cols=73 Identities=18% Similarity=0.294 Sum_probs=50.0
Q ss_pred CCCeecCCChhHHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHH
Q 020840 128 EGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQ 207 (320)
Q Consensus 128 ~GDFiTSpEIsp~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q 207 (320)
.|+.-++--=--.|=|+|+.--+. -.|.+-+|+=||.|.|..++.+|++. . -.++.+||+.|...+.-
T Consensus 56 Dg~~q~te~De~~YhE~l~h~~l~-----~~p~pk~VLIiGgGdG~~~revlk~~----~---v~~v~~VEID~~Vv~~a 123 (294)
T 3o4f_A 56 DGVVQTTERDEFIYHEMMTHVPLL-----AHGHAKHVLIIGGGDGAMLREVTRHK----N---VESITMVEIDAGVVSFC 123 (294)
T ss_dssp TTEEEEETTTHHHHHHHHHHHHHH-----HSSCCCEEEEESCTTSHHHHHHHTCT----T---CCEEEEEESCHHHHHHH
T ss_pred CCchhhccccHHHHHHHHHHHHHh-----hCCCCCeEEEECCCchHHHHHHHHcC----C---cceEEEEcCCHHHHHHH
Confidence 355444322124677887764432 23455689999999999988887642 1 13699999999999988
Q ss_pred HHhcc
Q 020840 208 HHNLK 212 (320)
Q Consensus 208 ~e~L~ 212 (320)
++.|.
T Consensus 124 ~~~lp 128 (294)
T 3o4f_A 124 RQYLP 128 (294)
T ss_dssp HHHCH
T ss_pred HhcCc
Confidence 88774
No 259
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=81.17 E-value=2 Score=40.73 Aligned_cols=43 Identities=14% Similarity=0.109 Sum_probs=34.3
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.-+|+|+|||+|+++..+... ..+++.||+|+...+.-++++.
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~---------~~~v~~vD~s~~~~~~a~~n~~ 252 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALG---------FREVVAVDSSAEALRRAEENAR 252 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHH---------EEEEEEEESCHHHHHHHHHHHH
T ss_pred CCeEEEeeeccCHHHHHHHHh---------CCEEEEEECCHHHHHHHHHHHH
Confidence 358999999999999887764 1368999999998876666554
No 260
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=80.58 E-value=3.4 Score=39.82 Aligned_cols=67 Identities=16% Similarity=0.135 Sum_probs=45.5
Q ss_pred CCCeecCCChhHHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHH
Q 020840 128 EGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQ 207 (320)
Q Consensus 128 ~GDFiTSpEIsp~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q 207 (320)
.|.|+.-.+.+++...++ +....-+|+|+|||.|..+..++... + ..+++.+|+|+...+.-
T Consensus 225 ~G~~~~qd~~s~~~~~~l-----------~~~~g~~VLDlgaG~G~~t~~la~~~---~----~~~v~a~D~~~~~l~~~ 286 (429)
T 1sqg_A 225 DGWVTVQDASAQGCMTWL-----------APQNGEHILDLCAAPGGKTTHILEVA---P----EAQVVAVDIDEQRLSRV 286 (429)
T ss_dssp GTSEEECCHHHHTHHHHH-----------CCCTTCEEEEESCTTCHHHHHHHHHC---T----TCEEEEEESSTTTHHHH
T ss_pred CCCeEeeCHHHHHHHHHc-----------CCCCcCeEEEECCCchHHHHHHHHHc---C----CCEEEEECCCHHHHHHH
Confidence 466665555555544332 22223489999999999999887753 2 14799999999987766
Q ss_pred HHhcc
Q 020840 208 HHNLK 212 (320)
Q Consensus 208 ~e~L~ 212 (320)
++++.
T Consensus 287 ~~~~~ 291 (429)
T 1sqg_A 287 YDNLK 291 (429)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66654
No 261
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=79.86 E-value=1.8 Score=41.31 Aligned_cols=43 Identities=9% Similarity=0.091 Sum_probs=33.4
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
-+|+|+|||+|+++..+... ..-+++.||+|+...+.-++++.
T Consensus 214 ~~VLDl~cGtG~~sl~la~~--------ga~~V~~vD~s~~al~~A~~N~~ 256 (385)
T 2b78_A 214 KTVLNLFSYTAAFSVAAAMG--------GAMATTSVDLAKRSRALSLAHFE 256 (385)
T ss_dssp CEEEEETCTTTHHHHHHHHT--------TBSEEEEEESCTTHHHHHHHHHH
T ss_pred CeEEEEeeccCHHHHHHHHC--------CCCEEEEEECCHHHHHHHHHHHH
Confidence 48999999999999877642 11268999999998876666554
No 262
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=79.06 E-value=5.2 Score=38.34 Aligned_cols=45 Identities=11% Similarity=0.041 Sum_probs=35.8
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~ 213 (320)
.+|+|+|||+|.++..++..+ + ..+++.||+++...+.-++++..
T Consensus 49 ~~VLDl~aGtG~~~l~~a~~~---~----~~~V~avDi~~~av~~a~~N~~~ 93 (378)
T 2dul_A 49 KIVLDALSATGIRGIRFALET---P----AEEVWLNDISEDAYELMKRNVML 93 (378)
T ss_dssp SEEEESSCTTSHHHHHHHHHS---S----CSEEEEEESCHHHHHHHHHHHHH
T ss_pred CEEEECCCchhHHHHHHHHhC---C----CCeEEEEECCHHHHHHHHHHHHH
Confidence 489999999999998877643 2 23699999999998877776643
No 263
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=78.72 E-value=3 Score=38.07 Aligned_cols=41 Identities=20% Similarity=0.270 Sum_probs=31.6
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L 211 (320)
-+|+|+|||.|+.+.-+... ..+++.||++|.+.+.-++.+
T Consensus 90 ~~VLDl~~G~G~dal~lA~~---------g~~V~~vE~~~~~~~l~~~~l 130 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASV---------GCRVRMLERNPVVAALLDDGL 130 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHH---------TCCEEEEECCHHHHHHHHHHH
T ss_pred CEEEEcCCcCCHHHHHHHHc---------CCEEEEEECCHHHHHHHHHHH
Confidence 58999999999998877653 125999999998765555544
No 264
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=77.47 E-value=8.4 Score=37.29 Aligned_cols=77 Identities=12% Similarity=0.006 Sum_probs=49.3
Q ss_pred CCCCCeecCCChhHHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHH
Q 020840 126 GAEGDFITSPEVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQK 205 (320)
Q Consensus 126 G~~GDFiTSpEIsp~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~ 205 (320)
|..+.|+ ...+-+.+.+...++..+.+...+ ..+|+|++||+|.++.-++...+ .+-+++.||+++...+
T Consensus 22 ~~~~~Ff---n~~~~~nR~l~~~~~~~~~~~~~~-g~~VLDlfaGtG~~sl~aa~~~~------ga~~V~avDi~~~av~ 91 (392)
T 3axs_A 22 SDMPVFY---NPRMRVNRDLAVLGLEYLCKKLGR-PVKVADPLSASGIRAIRFLLETS------CVEKAYANDISSKAIE 91 (392)
T ss_dssp TTCCSSC---CGGGHHHHHHHHHHHHHHHHHHCS-CEEEEESSCTTSHHHHHHHHHCS------CEEEEEEECSCHHHHH
T ss_pred CCCCEEE---cCCcHHHHHHHHHHHHHHhhccCC-CCEEEECCCcccHHHHHHHHhCC------CCCEEEEEECCHHHHH
Confidence 4456676 223455665554444433321011 25899999999999987776431 1236999999999988
Q ss_pred HHHHhcc
Q 020840 206 LQHHNLK 212 (320)
Q Consensus 206 ~Q~e~L~ 212 (320)
.-++++.
T Consensus 92 ~~~~N~~ 98 (392)
T 3axs_A 92 IMKENFK 98 (392)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777665
No 265
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=77.25 E-value=6.4 Score=37.04 Aligned_cols=44 Identities=14% Similarity=0.151 Sum_probs=33.3
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.-+|+|+| |+|.++..+... .+ ..+++.||+||.+.+.-++++.
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~---~~----~~~v~~vDi~~~~l~~a~~~~~ 216 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLS---GL----PKRIAVLDIDERLTKFIEKAAN 216 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHH---TC----CSEEEEECSCHHHHHHHHHHHH
T ss_pred CCEEEEEC-CCCHHHHHHHHh---CC----CCEEEEEECCHHHHHHHHHHHH
Confidence 35899999 999998776432 12 2379999999999887776654
No 266
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=77.18 E-value=9.2 Score=37.86 Aligned_cols=46 Identities=11% Similarity=0.031 Sum_probs=35.9
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.-+|+|+|||.|..+..+...+.. ..+++-||+|+...+.-++++.
T Consensus 102 g~~VLDlgaGpG~kt~~LA~~~~~------~g~V~AvDis~~~l~~a~~n~~ 147 (464)
T 3m6w_A 102 GERVLDLAAAPGGKTTHLAARMGG------KGLLLANEVDGKRVRGLLENVE 147 (464)
T ss_dssp TCEEEESSCTTCHHHHHHHHHTTT------CSEEEEECSCHHHHHHHHHHHH
T ss_pred CCEEEEEcCCcCHHHHHHHHhCCC------CCEEEEEECCHHHHHHHHHHHH
Confidence 358999999999999988876532 2368999999998776666553
No 267
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=76.90 E-value=8.5 Score=37.99 Aligned_cols=46 Identities=15% Similarity=0.130 Sum_probs=35.5
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.-+|+|+|||.|..+..+...+.. .-+++-||+|+...+.-++++.
T Consensus 106 g~~VLDlcaGpGgkt~~lA~~~~~------~g~V~AvDis~~rl~~~~~n~~ 151 (456)
T 3m4x_A 106 GEKVLDLCAAPGGKSTQLAAQMKG------KGLLVTNEIFPKRAKILSENIE 151 (456)
T ss_dssp TCEEEESSCTTCHHHHHHHHHHTT------CSEEEEECSSHHHHHHHHHHHH
T ss_pred CCEEEEECCCcCHHHHHHHHHcCC------CCEEEEEeCCHHHHHHHHHHHH
Confidence 358999999999999988876532 2368999999988776666553
No 268
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=76.08 E-value=3.6 Score=36.84 Aligned_cols=56 Identities=11% Similarity=-0.043 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 144 MVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 144 ~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
.|...++... ..+. -.|++..||+||.+...++. .-+++.||++|...+.-++++.
T Consensus 200 ~l~~~~i~~~---~~~~-~~vlD~f~GsGtt~~~a~~~---------gr~~ig~e~~~~~~~~~~~r~~ 255 (260)
T 1g60_A 200 DLIERIIRAS---SNPN-DLVLDCFMGSGTTAIVAKKL---------GRNFIGCDMNAEYVNQANFVLN 255 (260)
T ss_dssp HHHHHHHHHH---CCTT-CEEEESSCTTCHHHHHHHHT---------TCEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHh---CCCC-CEEEECCCCCCHHHHHHHHc---------CCeEEEEeCCHHHHHHHHHHHH
Confidence 4455554443 2233 48999999999998876553 1269999999999888888775
No 269
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=76.00 E-value=2.5 Score=40.12 Aligned_cols=43 Identities=14% Similarity=0.169 Sum_probs=33.5
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
-+|+|+|||+|+++..+.+. ...+++-||+|+...+.-++++.
T Consensus 222 ~~VLDl~cG~G~~sl~la~~--------g~~~V~~vD~s~~al~~a~~n~~ 264 (396)
T 3c0k_A 222 KRVLNCFSYTGGFAVSALMG--------GCSQVVSVDTSQEALDIARQNVE 264 (396)
T ss_dssp CEEEEESCTTCSHHHHHHHT--------TCSEEEEEESCHHHHHHHHHHHH
T ss_pred CeEEEeeccCCHHHHHHHHC--------CCCEEEEEECCHHHHHHHHHHHH
Confidence 48999999999999887652 12369999999988776666553
No 270
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=75.93 E-value=2.9 Score=39.66 Aligned_cols=43 Identities=12% Similarity=0.058 Sum_probs=33.6
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
-+|+|+|||+|+++..+... + ..+++-||+|+...+.-++++.
T Consensus 219 ~~VLDl~~G~G~~~~~la~~----g----~~~v~~vD~s~~~l~~a~~n~~ 261 (396)
T 2as0_A 219 DRVLDVFTYTGGFAIHAAIA----G----ADEVIGIDKSPRAIETAKENAK 261 (396)
T ss_dssp CEEEETTCTTTHHHHHHHHT----T----CSEEEEEESCHHHHHHHHHHHH
T ss_pred CeEEEecCCCCHHHHHHHHC----C----CCEEEEEeCCHHHHHHHHHHHH
Confidence 48999999999999877652 1 2369999999998776666554
No 271
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=75.18 E-value=2.7 Score=38.19 Aligned_cols=32 Identities=25% Similarity=0.221 Sum_probs=24.8
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChh
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPT 202 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~ 202 (320)
.-+|+|+|||+|.++.-+++. -+++-||+|+.
T Consensus 75 g~~VLDlGcGtG~~s~~la~~----------~~V~gvD~s~m 106 (265)
T 2oxt_A 75 TGRVVDLGCGRGGWSYYAASR----------PHVMDVRAYTL 106 (265)
T ss_dssp CEEEEEESCTTSHHHHHHHTS----------TTEEEEEEECC
T ss_pred CCEEEEeCcCCCHHHHHHHHc----------CcEEEEECchh
Confidence 358999999999988665432 25889999983
No 272
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=74.70 E-value=2.2 Score=38.61 Aligned_cols=33 Identities=18% Similarity=0.141 Sum_probs=25.9
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhh
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTL 203 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~L 203 (320)
-+|+|+|||+|.++.-+.+. ..+++.||+||.+
T Consensus 85 ~~VLDlgcG~G~~a~~lA~~---------g~~V~~vD~s~~~ 117 (258)
T 2r6z_A 85 PTVWDATAGLGRDSFVLASL---------GLTVTAFEQHPAV 117 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHT---------TCCEEEEECCHHH
T ss_pred CeEEEeeCccCHHHHHHHHh---------CCEEEEEECChhh
Confidence 48999999999998766542 1268999999944
No 273
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=73.76 E-value=2.5 Score=39.43 Aligned_cols=41 Identities=20% Similarity=0.312 Sum_probs=32.3
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
-+|+|+|||+|.++.. ++ . ..+++.||+||...+.-++++.
T Consensus 197 ~~VLDlg~G~G~~~l~-a~--~-------~~~V~~vD~s~~ai~~a~~n~~ 237 (336)
T 2yx1_A 197 DVVVDMFAGVGPFSIA-CK--N-------AKKIYAIDINPHAIELLKKNIK 237 (336)
T ss_dssp CEEEETTCTTSHHHHH-TT--T-------SSEEEEEESCHHHHHHHHHHHH
T ss_pred CEEEEccCccCHHHHh-cc--C-------CCEEEEEECCHHHHHHHHHHHH
Confidence 4899999999999876 43 1 2369999999998877666654
No 274
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=72.67 E-value=6.4 Score=38.18 Aligned_cols=45 Identities=16% Similarity=0.090 Sum_probs=35.6
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
-+|+|+|||.|..+..+...+.. ..+++.+|+|+...+.-++++.
T Consensus 261 ~~VLDlgaG~G~~t~~la~~~~~------~~~v~a~D~s~~~l~~~~~~~~ 305 (450)
T 2yxl_A 261 ETVVDLAAAPGGKTTHLAELMKN------KGKIYAFDVDKMRMKRLKDFVK 305 (450)
T ss_dssp CEEEESSCTTCHHHHHHHHHTTT------CSEEEEECSCHHHHHHHHHHHH
T ss_pred CEEEEeCCCccHHHHHHHHHcCC------CCEEEEEcCCHHHHHHHHHHHH
Confidence 48999999999999988776421 2479999999998776666654
No 275
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=71.95 E-value=3.2 Score=38.00 Aligned_cols=32 Identities=22% Similarity=0.270 Sum_probs=24.9
Q ss_pred cceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChh
Q 020840 161 RVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPT 202 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~ 202 (320)
.-+|+|+|||+|.++.-+++. -+++-||+|+.
T Consensus 83 g~~VLDlGcGtG~~s~~la~~----------~~V~gVD~s~m 114 (276)
T 2wa2_A 83 KGTVVDLGCGRGSWSYYAASQ----------PNVREVKAYTL 114 (276)
T ss_dssp CEEEEEESCTTCHHHHHHHTS----------TTEEEEEEECC
T ss_pred CCEEEEeccCCCHHHHHHHHc----------CCEEEEECchh
Confidence 358999999999988665442 25889999993
No 276
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=69.15 E-value=4.1 Score=37.58 Aligned_cols=43 Identities=19% Similarity=0.169 Sum_probs=33.2
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
-.|+++|||.|.++..++.. .+.+++.||+||...+.-++++.
T Consensus 127 ~~VlD~~aG~G~~~i~~a~~--------g~~~V~avD~np~a~~~~~~N~~ 169 (278)
T 3k6r_A 127 ELVVDMFAGIGHLSLPIAVY--------GKAKVIAIEKDPYTFKFLVENIH 169 (278)
T ss_dssp CEEEETTCTTTTTTHHHHHH--------TCCEEEEECCCHHHHHHHHHHHH
T ss_pred CEEEEecCcCcHHHHHHHHh--------cCCeEEEEECCHHHHHHHHHHHH
Confidence 38999999999998776643 12368999999988776666554
No 277
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=68.97 E-value=3.4 Score=40.47 Aligned_cols=68 Identities=18% Similarity=0.223 Sum_probs=43.7
Q ss_pred eecCC-ChhHHHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHH
Q 020840 131 FITSP-EVSQMFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHH 209 (320)
Q Consensus 131 FiTSp-EIsp~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e 209 (320)
++|.. .+-|.=.+.+|.+..... . + .-+|+|+|||.|..+..+.+. ..+++.||+|+.+.+.-++
T Consensus 68 ~~p~~~~~eQat~e~vA~~~a~~l---~-~-g~~VLDLgcG~G~~al~LA~~---------g~~V~~VD~s~~~l~~Ar~ 133 (410)
T 3ll7_A 68 YIPSRLSLEQSSGAVTSSYKSRFI---R-E-GTKVVDLTGGLGIDFIALMSK---------ASQGIYIERNDETAVAARH 133 (410)
T ss_dssp CCCCHHHHHHSCCHHHHHHGGGGS---C-T-TCEEEESSCSSSHHHHHHHTT---------CSEEEEEESCHHHHHHHHH
T ss_pred ecCCCCChhhcCHHHHHHHHHHhc---C-C-CCEEEEeCCCchHHHHHHHhc---------CCEEEEEECCHHHHHHHHH
Confidence 34433 344444566666643221 1 1 248999999999987654321 1379999999999887776
Q ss_pred hcc
Q 020840 210 NLK 212 (320)
Q Consensus 210 ~L~ 212 (320)
++.
T Consensus 134 N~~ 136 (410)
T 3ll7_A 134 NIP 136 (410)
T ss_dssp HHH
T ss_pred hHH
Confidence 654
No 278
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=68.40 E-value=11 Score=34.99 Aligned_cols=46 Identities=15% Similarity=0.288 Sum_probs=33.6
Q ss_pred ceEEEecCCchh--HHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccc
Q 020840 162 VNLVELGPGRGT--LMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (320)
Q Consensus 162 l~IvEiGaG~Gt--La~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~ 213 (320)
-+|++||||.|| +...++..+ .|+ .+++-||.||.+.++-+++|..
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~--~P~----arVv~VD~sp~mLa~Ar~~l~~ 127 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSV--APE----SRVVYVDNDPIVLTLSQGLLAS 127 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHH--CTT----CEEEEEECCHHHHHTTHHHHCC
T ss_pred CEEEEeCCCCCcccHHHHHHHHH--CCC----CEEEEEeCChHHHHHHHHHhcc
Confidence 489999999844 445555433 343 4799999999998877777754
No 279
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=67.09 E-value=9.4 Score=38.87 Aligned_cols=53 Identities=23% Similarity=0.151 Sum_probs=38.3
Q ss_pred HHHHcCCCCcceEEEecCCchhHHHHHHHHHhc----CcCc-ccceeEEEEecChhhHH
Q 020840 152 LWEQMGQPNRVNLVELGPGRGTLMADLLRGASK----FKNF-TESLHIHLVECSPTLQK 205 (320)
Q Consensus 152 ~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~----~p~~-~~~l~y~iVE~Sp~Lr~ 205 (320)
.|+..+. ..++|+|+|=|+|....-.++.+++ .|+. ..+++|+-+|.-|--++
T Consensus 51 ~~~~~~~-~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~ 108 (689)
T 3pvc_A 51 RFASHPQ-QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVA 108 (689)
T ss_dssp HHHHCCS-SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHH
T ss_pred HHhhCCC-CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHH
Confidence 4443332 4699999999999999999888743 3432 34689999999774443
No 280
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=65.52 E-value=8.5 Score=37.95 Aligned_cols=38 Identities=18% Similarity=0.234 Sum_probs=27.7
Q ss_pred CcceEEEecCC------chhHHHHHHHHHhcCcCcccceeEEEEecChhh
Q 020840 160 NRVNLVELGPG------RGTLMADLLRGASKFKNFTESLHIHLVECSPTL 203 (320)
Q Consensus 160 ~~l~IvEiGaG------~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~L 203 (320)
.+.+|+||||| +|..+..+++.. +| ..+++-||+|+.+
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~--fP----~a~V~GVDiSp~m 259 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSF--FP----RGQIYGLDIMDKS 259 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHH--CT----TCEEEEEESSCCG
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHh--CC----CCEEEEEECCHHH
Confidence 34699999999 666666665432 23 2479999999997
No 281
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=64.58 E-value=13 Score=38.58 Aligned_cols=43 Identities=19% Similarity=0.162 Sum_probs=33.5
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
-+|+|+|||+|.++..++.. ..-+++.||+|+...+.-++++.
T Consensus 541 ~~VLDlg~GtG~~sl~aa~~--------ga~~V~aVD~s~~al~~a~~N~~ 583 (703)
T 3v97_A 541 KDFLNLFSYTGSATVHAGLG--------GARSTTTVDMSRTYLEWAERNLR 583 (703)
T ss_dssp CEEEEESCTTCHHHHHHHHT--------TCSEEEEEESCHHHHHHHHHHHH
T ss_pred CcEEEeeechhHHHHHHHHC--------CCCEEEEEeCCHHHHHHHHHHHH
Confidence 48999999999998876642 12368999999998877766654
No 282
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=64.22 E-value=8.6 Score=37.40 Aligned_cols=60 Identities=12% Similarity=0.178 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccc
Q 020840 140 MFGEMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (320)
Q Consensus 140 ~FGe~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~ 213 (320)
.|=|+++.-. +-.+.+-+|+=+|+|.|..++.+|++ |. -++.+||+.|...+.-++.|..
T Consensus 191 ~Y~e~l~h~~------l~~~~pkrVLIIGgGdG~~~revlkh----~~----~~V~~VEIDp~VVe~ar~yfp~ 250 (381)
T 3c6k_A 191 AYTRAIMGSG------KEDYTGKDVLILGGGDGGILCEIVKL----KP----KMVTMVEIDQMVIDGCKKYMRK 250 (381)
T ss_dssp HHHHHHTTTT------CCCCTTCEEEEEECTTCHHHHHHHTT----CC----SEEEEEESCHHHHHHHHHHCCC
T ss_pred HHHHHHHHHH------hhcCCCCeEEEECCCcHHHHHHHHhc----CC----ceeEEEccCHHHHHHHHhhchh
Confidence 4666654432 12233458999999999999888764 21 2689999999999988887753
No 283
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=63.87 E-value=7 Score=37.61 Aligned_cols=42 Identities=7% Similarity=-0.069 Sum_probs=32.9
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
-+|+++|||+|.++..+.+. . ..++-||+|+...+.-++++.
T Consensus 216 ~~VLDlg~GtG~~sl~~a~~--------g-a~V~avDis~~al~~a~~n~~ 257 (393)
T 4dmg_A 216 ERVLDVYSYVGGFALRAARK--------G-AYALAVDKDLEALGVLDQAAL 257 (393)
T ss_dssp CEEEEESCTTTHHHHHHHHT--------T-CEEEEEESCHHHHHHHHHHHH
T ss_pred CeEEEcccchhHHHHHHHHc--------C-CeEEEEECCHHHHHHHHHHHH
Confidence 48999999999999887652 1 138999999998876666553
No 284
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=62.91 E-value=8.5 Score=38.05 Aligned_cols=45 Identities=16% Similarity=0.196 Sum_probs=35.2
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
-+|+|+|||.|..+..+...+.. .-+++-+|+|+...+.-++++.
T Consensus 119 ~~VLDl~aGpG~kt~~lA~~~~~------~g~V~avDis~~~l~~~~~n~~ 163 (479)
T 2frx_A 119 QRVMDVAAAPGSKTTQISARMNN------EGAILANEFSASRVKVLHANIS 163 (479)
T ss_dssp SEEEESSCTTSHHHHHHHHHTTT------CSEEEEECSSHHHHHHHHHHHH
T ss_pred CEEEEeCCCCCHHHHHHHHhCCC------CCEEEEEECCHHHHHHHHHHHH
Confidence 48999999999999988876421 2368999999998776666553
No 285
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=62.60 E-value=16 Score=33.79 Aligned_cols=45 Identities=9% Similarity=0.013 Sum_probs=35.8
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
-+|+|+|||.|..+..++..+.. .-+++-+|+++...+.-++++.
T Consensus 104 ~~VLDlcaG~G~kt~~la~~~~~------~g~V~a~D~~~~~l~~~~~n~~ 148 (309)
T 2b9e_A 104 SHVIDACAAPGNKTSHLAALLKN------QGKIFAFDLDAKRLASMATLLA 148 (309)
T ss_dssp CEEEESSCTTCHHHHHHHHHHTT------CSEEEEEESCHHHHHHHHHHHH
T ss_pred CEEEEeCCChhHHHHHHHHHhCC------CCEEEEEeCCHHHHHHHHHHHH
Confidence 48999999999999998876532 2368999999998776666664
No 286
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=57.94 E-value=12 Score=37.77 Aligned_cols=45 Identities=20% Similarity=0.182 Sum_probs=34.8
Q ss_pred CcceEEEecCCchhHHHHHHHHHhc----CcCc-ccceeEEEEecChhhH
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASK----FKNF-TESLHIHLVECSPTLQ 204 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~----~p~~-~~~l~y~iVE~Sp~Lr 204 (320)
..++|+|+|=|+|..+.-.+..+++ .|+. ..+++|+-+|.-|--+
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~ 115 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTR 115 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCH
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCH
Confidence 4689999999999999999988753 3443 3578999999954333
No 287
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=51.04 E-value=14 Score=34.16 Aligned_cols=28 Identities=25% Similarity=0.168 Sum_probs=21.5
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEec
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVEC 199 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~ 199 (320)
-+|+++|||+|.++..+++. -+++-||+
T Consensus 84 ~~VLDlGcG~G~~s~~la~~----------~~V~gvD~ 111 (305)
T 2p41_A 84 GKVVDLGCGRGGWSYYCGGL----------KNVREVKG 111 (305)
T ss_dssp EEEEEETCTTSHHHHHHHTS----------TTEEEEEE
T ss_pred CEEEEEcCCCCHHHHHHHhc----------CCEEEEec
Confidence 59999999999998766542 13667777
No 288
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=50.24 E-value=24 Score=33.18 Aligned_cols=70 Identities=16% Similarity=0.120 Sum_probs=41.2
Q ss_pred CCeecCCChhHHHHHHHHHHHHH--HHHHcCCCCcceEEEecCCchhHHHHHHHHHh-cCcCcccceeEEEEecCh
Q 020840 129 GDFITSPEVSQMFGEMVGVWAMC--LWEQMGQPNRVNLVELGPGRGTLMADLLRGAS-KFKNFTESLHIHLVECSP 201 (320)
Q Consensus 129 GDFiTSpEIsp~FGe~IA~~i~~--~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~-~~p~~~~~l~y~iVE~Sp 201 (320)
||-|=|..-+ ...|+.-+++.. ++++......++|+|+|=|+|..+.-.++.+. ..|. .+++|+-+|.-|
T Consensus 64 ~e~YhS~~~G-Al~Es~hVFi~~~~L~~r~~~~~~~~IlE~GFGTGLNfl~t~~~~~~~~~~--~~L~~iS~Ek~p 136 (308)
T 3vyw_A 64 GEPYHSQTAG-AIRESLYKFVRPSRILEKAKERKVIRILDVGFGLGYNLAVALKHLWEVNPK--LRVEIISFEKEL 136 (308)
T ss_dssp TEESSCTTTC-HHHHHHHHTHHHHTHHHHHHHCSEEEEEEECCTTSHHHHHHHHHHHHHCTT--CEEEEEEEESSC
T ss_pred CCccCCCCCc-HHHHHHHHHhccCCchHHhcCCCCcEEEEeCCCccHHHHHHHHHHHHhCCC--cceEEEeecHHH
Confidence 5666554322 224555555432 12221112458999999999998776676653 4454 357888888643
No 289
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=48.56 E-value=43 Score=29.38 Aligned_cols=42 Identities=21% Similarity=0.350 Sum_probs=29.9
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~ 213 (320)
-+|+|+|+|-.|+... +.+ .-+++-||.++.+.+..++.+..
T Consensus 32 ~~VLEiGtGySTl~lA------~~~----~g~VvtvE~d~~~~~~ar~~l~~ 73 (202)
T 3cvo_A 32 EVILEYGSGGSTVVAA------ELP----GKHVTSVESDRAWARMMKAWLAA 73 (202)
T ss_dssp SEEEEESCSHHHHHHH------TST----TCEEEEEESCHHHHHHHHHHHHH
T ss_pred CEEEEECchHHHHHHH------HcC----CCEEEEEeCCHHHHHHHHHHHHH
Confidence 3899999874333221 111 24799999999999988887764
No 290
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=46.55 E-value=13 Score=35.71 Aligned_cols=23 Identities=22% Similarity=0.338 Sum_probs=18.4
Q ss_pred CCcceEEEecCCchhHHHHHHHH
Q 020840 159 PNRVNLVELGPGRGTLMADLLRG 181 (320)
Q Consensus 159 p~~l~IvEiGaG~GtLa~DIL~~ 181 (320)
|++++|+++|||+|.++.-++..
T Consensus 51 ~~~~~IaDlGCssG~Nt~~~v~~ 73 (374)
T 3b5i_A 51 PPPFTAVDLGCSSGANTVHIIDF 73 (374)
T ss_dssp CCCEEEEEETCCSSHHHHHHHHH
T ss_pred CCceEEEecCCCCChhHHHHHHH
Confidence 45799999999999887765443
No 291
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=45.99 E-value=37 Score=32.47 Aligned_cols=48 Identities=15% Similarity=0.185 Sum_probs=34.4
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
+.-.++++||+.|..+..++... .+ ...+++.+|++|...+.-++++.
T Consensus 226 ~~~~viDvGAn~G~~s~~~a~~~--~~---~~~~V~afEP~p~~~~~L~~n~~ 273 (409)
T 2py6_A 226 DSEKMVDCGASIGESLAGLIGVT--KG---KFERVWMIEPDRINLQTLQNVLR 273 (409)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHH--TS---CCSEEEEECCCHHHHHHHHHHHH
T ss_pred CCCEEEECCCCcCHHHHHHHHHh--cC---CCCEEEEEcCCHHHHHHHHHHHH
Confidence 34589999999999877655222 11 12379999999998877666654
No 292
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=42.12 E-value=5.1 Score=47.49 Aligned_cols=50 Identities=16% Similarity=0.222 Sum_probs=36.8
Q ss_pred CcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhc
Q 020840 160 NRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNL 211 (320)
Q Consensus 160 ~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L 211 (320)
..++|+|+|+|+|.+...||..+...|..+ .+|++.++|+.+-+.-++++
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~--~~yt~td~s~~~~~~a~~~f 1289 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMD--LDYTATDRNPQALEAAQAKL 1289 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCE--EEEEEECSSSSSTTTTTTTH
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCccc--ceEEEecCChHHHHHHHHHh
Confidence 358999999999999999998885433222 47999999987754333433
No 293
>2ba3_A NIKA; dimer, bacterial conjugation, relaxase, DNA binding, ribbon- helix-helix, DNA binding protein; NMR {Plasmid R64}
Probab=39.51 E-value=28 Score=23.41 Aligned_cols=29 Identities=14% Similarity=0.235 Sum_probs=22.9
Q ss_pred hHHHHHHHHHHHHhcCCcccHHHHHHHhhcC
Q 020840 83 ESELVKHLKGIIKFRGGPISVAEYMEEVLTN 113 (320)
Q Consensus 83 ~~~L~~~i~~~I~~~~GpIsf~dfM~~aLY~ 113 (320)
+++-.+.|.+..+.. | +++++||..++.+
T Consensus 23 t~eE~~~l~~~A~~~-g-~s~SeyiR~~~l~ 51 (51)
T 2ba3_A 23 SPVEDETIRKKAEDS-G-LTVSAYIRNAALN 51 (51)
T ss_dssp CHHHHHHHHHHHHHH-T-CCHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHh-C-CCHHHHHHHHHcC
Confidence 455577788888887 5 8999999998753
No 294
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=34.92 E-value=49 Score=30.48 Aligned_cols=43 Identities=16% Similarity=-0.025 Sum_probs=35.6
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhccc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLKC 213 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~~ 213 (320)
-.|++.=||+||.+...++. .-+++.||++|...+.-+++|..
T Consensus 254 ~~VlDpF~GsGtt~~aa~~~---------gr~~ig~e~~~~~~~~~~~r~~~ 296 (323)
T 1boo_A 254 DLVVDIFGGSNTTGLVAERE---------SRKWISFEMKPEYVAASAFRFLD 296 (323)
T ss_dssp CEEEETTCTTCHHHHHHHHT---------TCEEEEEESCHHHHHHHHGGGSC
T ss_pred CEEEECCCCCCHHHHHHHHc---------CCCEEEEeCCHHHHHHHHHHHHh
Confidence 47999999999988776543 13699999999999999998865
No 295
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=34.52 E-value=50 Score=31.84 Aligned_cols=40 Identities=18% Similarity=0.210 Sum_probs=26.1
Q ss_pred cceEEEecCCchhHHHHHHH----HHhcC-cC-----cccceeEEEEecC
Q 020840 161 RVNLVELGPGRGTLMADLLR----GASKF-KN-----FTESLHIHLVECS 200 (320)
Q Consensus 161 ~l~IvEiGaG~GtLa~DIL~----~l~~~-p~-----~~~~l~y~iVE~S 200 (320)
.+.|.++||++|.++.-++. .+++. .. -...+++++-|..
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp 102 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLF 102 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCC
Confidence 79999999999987765544 44431 11 0124677888876
No 296
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=34.07 E-value=67 Score=30.39 Aligned_cols=55 Identities=16% Similarity=0.215 Sum_probs=36.5
Q ss_pred HHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhh
Q 020840 146 GVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTL 203 (320)
Q Consensus 146 A~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~L 203 (320)
..+++....+.|..+.-.||=+|||.|+-..-+-+. +|+...+++.++||+.|..
T Consensus 46 EIeFLt~~~~~~~~~~~~VVYVGSApG~HL~~L~~~---fp~~f~~ikWvLiDPap~~ 100 (307)
T 3mag_A 46 ELFFLSKLQRHGILDGATVVYIGSAPGTHIRYLRDH---FYNLGVIIKWMLIDGRHHD 100 (307)
T ss_dssp HHHHHHHHHHTTCSTTCEEEEESCCSCHHHHHHHHH---HHHTTCCCEEEEEESSCCC
T ss_pred HHHHHHHHHhcCCCCCcEEEEecccCccHHHHHHHh---chhhCCCeEEEEEcCCcch
Confidence 345555555555443359999999999966544443 4544456789999987753
No 297
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=31.04 E-value=1e+02 Score=28.60 Aligned_cols=41 Identities=12% Similarity=0.048 Sum_probs=34.2
Q ss_pred ceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecChhhHHHHHHhcc
Q 020840 162 VNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSPTLQKLQHHNLK 212 (320)
Q Consensus 162 l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~Lr~~Q~e~L~ 212 (320)
-.+|+.++|.|.-+..||+. ..+++-+|.+|...+.-++ |.
T Consensus 24 g~~VD~T~G~GGHS~~il~~---------~g~VigiD~Dp~Ai~~A~~-L~ 64 (285)
T 1wg8_A 24 GVYVDATLGGAGHARGILER---------GGRVIGLDQDPEAVARAKG-LH 64 (285)
T ss_dssp CEEEETTCTTSHHHHHHHHT---------TCEEEEEESCHHHHHHHHH-TC
T ss_pred CEEEEeCCCCcHHHHHHHHC---------CCEEEEEeCCHHHHHHHHh-hc
Confidence 48999999999999999874 2368999999998877666 64
No 298
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=30.92 E-value=80 Score=29.19 Aligned_cols=58 Identities=12% Similarity=0.096 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhcCcCcccceeEEEEecCh---hhHHHHHHhccc
Q 020840 143 EMVGVWAMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASKFKNFTESLHIHLVECSP---TLQKLQHHNLKC 213 (320)
Q Consensus 143 e~IA~~i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp---~Lr~~Q~e~L~~ 213 (320)
..|...++..+. .+. -.|++.=||+||-+...++.= -+++.||++| ...+.-+++|..
T Consensus 229 ~~l~~~~i~~~~---~~~-~~vlDpF~GsGtt~~aa~~~~---------r~~ig~e~~~~~~~~~~~~~~Rl~~ 289 (319)
T 1eg2_A 229 AAVIERLVRALS---HPG-STVLDFFAGSGVTARVAIQEG---------RNSICTDAAPVFKEYYQKQLTFLQD 289 (319)
T ss_dssp HHHHHHHHHHHS---CTT-CEEEETTCTTCHHHHHHHHHT---------CEEEEEESSTHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHhC---CCC-CEEEecCCCCCHHHHHHHHcC---------CcEEEEECCccHHHHHHHHHHHHHH
Confidence 445555555442 232 479999999999888776541 2699999999 888888888864
No 299
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=27.48 E-value=1.9e+02 Score=26.76 Aligned_cols=46 Identities=17% Similarity=0.187 Sum_probs=34.5
Q ss_pred HHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhc-CcCcccceeEEEEecChh
Q 020840 150 MCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASK-FKNFTESLHIHLVECSPT 202 (320)
Q Consensus 150 ~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~-~p~~~~~l~y~iVE~Sp~ 202 (320)
.++|++++. +..|=++.|+|.++..|..+++. .| .++++.||+...
T Consensus 168 ~Ei~~q~~~---~d~vvv~vG~GG~~aGi~~~~k~~~p----~~~vigVe~~~~ 214 (346)
T 3l6b_A 168 LEVLNQVPL---VDALVVPVGGGGMLAGIAITVKALKP----SVKVYAAEPSNA 214 (346)
T ss_dssp HHHHHHSTT---CCEEEEECSSSHHHHHHHHHHHHHCT----TSEEEEEEEGGG
T ss_pred HHHHHhCCC---CCEEEEecCccHHHHHHHHHHHHhCC----CCEEEEEecCCC
Confidence 456777754 35677888999999999999975 34 368999997643
No 300
>2k9i_A Plasmid PRN1, complete sequence; plasmid COPY control protein, ribbon helix helix protein, DNA binding protein; NMR {Sulfolobus islandicus} PDB: 3ft7_A
Probab=25.82 E-value=64 Score=21.35 Aligned_cols=29 Identities=14% Similarity=0.214 Sum_probs=23.6
Q ss_pred hHHHHHHHHHHHHhcCCcccHHHHHHHhhcC
Q 020840 83 ESELVKHLKGIIKFRGGPISVAEYMEEVLTN 113 (320)
Q Consensus 83 ~~~L~~~i~~~I~~~~GpIsf~dfM~~aLY~ 113 (320)
..+|.+.|.+..+.. | +|.+++|+.||-.
T Consensus 17 ~~el~~~l~~~a~~~-g-~s~s~~ir~ai~~ 45 (55)
T 2k9i_A 17 PQEWHDRLMEIAKEK-N-LTLSDVCRLAIKE 45 (55)
T ss_dssp CHHHHHHHHHHHHHH-T-CCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh-C-CCHHHHHHHHHHH
Confidence 477888888888877 5 7999999999854
No 301
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=23.13 E-value=96 Score=28.46 Aligned_cols=38 Identities=18% Similarity=0.330 Sum_probs=23.9
Q ss_pred CCCCcceEEEecCCc------hhHHHHHHHHHhcCcCcccceeEEEEecChh
Q 020840 157 GQPNRVNLVELGPGR------GTLMADLLRGASKFKNFTESLHIHLVECSPT 202 (320)
Q Consensus 157 g~p~~l~IvEiGaG~------GtLa~DIL~~l~~~p~~~~~l~y~iVE~Sp~ 202 (320)
..+...+|+|+|||+ |+ .++. +..| ...+++-||+||.
T Consensus 60 ~l~~g~~VLDLGcGsg~~~GpGs---~~~a--~~~~---~~~~V~gvDis~~ 103 (290)
T 2xyq_A 60 AVPYNMRVIHFGAGSDKGVAPGT---AVLR--QWLP---TGTLLVDSDLNDF 103 (290)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH---HHHH--HHSC---TTCEEEEEESSCC
T ss_pred CCCCCCEEEEeCCCCCCCCCcHH---HHHH--HHcC---CCCEEEEEECCCC
Confidence 334446899999955 76 2222 1222 1237999999998
No 302
>2btq_B Tubulin btubb; structural protein, cytoskeletal protein/complex, bacterial tubulin, cytoskeleton, polymerization, verrucomicrobia; HET: GDP; 3.2A {Prosthecobacter dejongeii}
Probab=21.97 E-value=82 Score=30.63 Aligned_cols=72 Identities=17% Similarity=0.126 Sum_probs=37.9
Q ss_pred hhcCCCCcccCCCCCCCCCCCeecCCChhHHHHHHHHHHHHHHHHHc----CCC-CcceEEEecCCch-hHHHHHHHHHh
Q 020840 110 VLTNPKAGFYINRDVFGAEGDFITSPEVSQMFGEMVGVWAMCLWEQM----GQP-NRVNLVELGPGRG-TLMADLLRGAS 183 (320)
Q Consensus 110 aLY~P~~GYY~~~~~~G~~GDFiTSpEIsp~FGe~IA~~i~~~w~~~----g~p-~~l~IvEiGaG~G-tLa~DIL~~l~ 183 (320)
.||||+.=+..+ . |..++|--- .+-.|+-++..+.+..++. ... .-+.+--+|+|+| -++.-|++.++
T Consensus 84 ~lf~p~~i~~g~-~--gAgnn~a~G---~~~~G~~~~e~~~d~Ir~~~e~cD~lqgf~i~~s~gGGTGSG~~~~l~e~l~ 157 (426)
T 2btq_B 84 QLFDESSIVRKI-P--GAANNWARG---YNVEGEKVIDQIMNVIDSAVEKTKGLQGFLMTHSIGGGSGSGLGSLILERLR 157 (426)
T ss_dssp CCCCTTSEEECC-S--CCTTCHHHH---HTHHHHHHHHHHHHHHHHHHTTCSSEEEEEEEEESSSSTTTHHHHHHHHHHH
T ss_pred cccCcccccccc-c--CccCccccc---ccchhHHHHHHHHHHHHHHHhcCCCcceEEEEEecCCCccccHHHHHHHHHH
Confidence 578876332221 1 555565222 1334555555555444332 211 1345569999997 46666777777
Q ss_pred c-CcC
Q 020840 184 K-FKN 187 (320)
Q Consensus 184 ~-~p~ 187 (320)
. +|+
T Consensus 158 ~~y~~ 162 (426)
T 2btq_B 158 QAYPK 162 (426)
T ss_dssp TTCTT
T ss_pred HHcCc
Confidence 4 454
No 303
>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum}
Probab=20.33 E-value=3.3e+02 Score=25.20 Aligned_cols=47 Identities=19% Similarity=0.102 Sum_probs=35.4
Q ss_pred HHHHHHHcCCCCcceEEEecCCchhHHHHHHHHHhc-CcCcccceeEEEEecChh
Q 020840 149 AMCLWEQMGQPNRVNLVELGPGRGTLMADLLRGASK-FKNFTESLHIHLVECSPT 202 (320)
Q Consensus 149 i~~~w~~~g~p~~l~IvEiGaG~GtLa~DIL~~l~~-~p~~~~~l~y~iVE~Sp~ 202 (320)
..+.|++++. +..+=++.|+|.++..+..+++. .| .++++.||+...
T Consensus 199 ~~Ei~~q~~~---~d~vvvpvG~GG~~~Gi~~~~k~~~~----~~~vigVe~~~~ 246 (366)
T 3iau_A 199 GTEINRQLKD---IHAVFIPVGGGGLIAGVATFFKQIAP----NTKIIGVEPYGA 246 (366)
T ss_dssp HHHHHHHCCS---EEEEEEECSSSHHHHHHHHHHHHHST----TSEEEEEEEGGG
T ss_pred HHHHHHhcCC---CCEEEEccCchHHHHHHHHHHHHhCC----CCeEEEEeecCC
Confidence 3566777743 46778899999999999999875 33 357899987654
Done!