Query 020843
Match_columns 320
No_of_seqs 258 out of 674
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 09:00:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020843.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020843hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dlx_A UBX domain-containing p 100.0 6.6E-33 2.3E-37 238.4 15.0 136 145-281 7-143 (153)
2 2ec4_A FAS-associated factor 1 99.9 2.3E-27 7.7E-32 208.7 13.9 130 150-279 21-172 (178)
3 3f9u_A Putative exported cytoc 99.6 7.6E-16 2.6E-20 131.6 10.8 111 166-277 33-168 (172)
4 2kuc_A Putative disulphide-iso 99.6 1.3E-14 4.6E-19 117.5 13.4 111 165-276 12-122 (130)
5 2ju5_A Thioredoxin disulfide i 99.6 3E-14 1E-18 120.3 13.8 108 167-276 34-153 (154)
6 3ph9_A Anterior gradient prote 99.6 4.8E-15 1.6E-19 126.6 7.5 109 166-278 30-148 (151)
7 2lst_A Thioredoxin; structural 99.3 3.5E-16 1.2E-20 127.2 0.0 111 170-280 9-121 (130)
8 3ira_A Conserved protein; meth 99.5 5.3E-14 1.8E-18 122.8 9.5 106 168-277 27-146 (173)
9 2fwh_A Thiol:disulfide interch 99.4 4E-13 1.4E-17 110.4 10.8 113 158-274 10-127 (134)
10 3fk8_A Disulphide isomerase; A 99.4 4.2E-13 1.5E-17 109.3 10.6 105 167-273 16-131 (133)
11 1v92_A NSFL1 cofactor P47; 3-h 99.3 2.5E-12 8.5E-17 88.1 4.8 42 9-51 4-45 (46)
12 2dal_A Protein KIAA0794; FAS a 99.3 3.8E-12 1.3E-16 92.9 5.6 45 8-53 13-57 (62)
13 2l57_A Uncharacterized protein 99.2 7.5E-11 2.6E-15 95.0 11.2 98 176-277 22-119 (126)
14 3dml_A Putative uncharacterize 99.2 9.4E-12 3.2E-16 101.8 5.7 97 179-278 17-113 (116)
15 3e21_A HFAF1, FAS-associated f 99.2 3.3E-12 1.1E-16 87.1 2.5 40 9-49 4-44 (45)
16 1ep7_A Thioredoxin CH1, H-type 99.2 1.1E-10 3.9E-15 91.4 11.3 101 167-275 11-111 (112)
17 2dam_A ETEA protein; KIAA0887, 99.2 1.9E-11 6.6E-16 90.5 5.7 45 7-52 15-60 (67)
18 2voc_A Thioredoxin; electron t 99.2 2.5E-10 8.4E-15 90.3 11.4 100 165-276 7-106 (112)
19 2vlu_A Thioredoxin, thioredoxi 99.2 3.1E-10 1.1E-14 90.5 11.5 108 159-275 13-120 (122)
20 1xfl_A Thioredoxin H1; AT3G510 99.1 3.4E-10 1.1E-14 91.8 11.5 98 166-274 24-123 (124)
21 2vm1_A Thioredoxin, thioredoxi 99.1 3.2E-10 1.1E-14 89.4 11.1 100 166-276 14-115 (118)
22 3zzx_A Thioredoxin; oxidoreduc 99.1 2.8E-10 9.5E-15 90.6 10.8 94 167-271 9-102 (105)
23 3qfa_C Thioredoxin; protein-pr 99.1 2.6E-10 9E-15 91.1 10.4 98 163-273 16-115 (116)
24 3tco_A Thioredoxin (TRXA-1); d 99.1 5.1E-10 1.7E-14 86.7 11.6 99 165-274 10-108 (109)
25 3gnj_A Thioredoxin domain prot 99.1 8.4E-10 2.9E-14 86.0 12.5 92 177-275 19-110 (111)
26 3d22_A TRXH4, thioredoxin H-ty 99.1 4.5E-10 1.5E-14 91.9 11.2 101 166-277 32-134 (139)
27 1w4v_A Thioredoxin, mitochondr 99.1 6.8E-10 2.3E-14 88.8 11.8 98 170-274 21-118 (119)
28 3p2a_A Thioredoxin 2, putative 99.1 6.9E-10 2.4E-14 92.0 12.2 102 165-277 44-145 (148)
29 2dml_A Protein disulfide-isome 99.1 3.7E-10 1.2E-14 91.1 9.7 104 166-278 24-127 (130)
30 3die_A Thioredoxin, TRX; elect 99.1 6.7E-10 2.3E-14 85.7 10.8 98 164-273 8-105 (106)
31 2l5l_A Thioredoxin; structural 99.1 4.1E-10 1.4E-14 92.3 10.0 96 178-280 36-131 (136)
32 1ti3_A Thioredoxin H, PTTRXH1; 99.1 4.8E-10 1.6E-14 87.7 9.8 99 166-275 12-112 (113)
33 1dby_A Chloroplast thioredoxin 99.1 9.9E-10 3.4E-14 85.2 11.5 98 170-274 9-106 (107)
34 1thx_A Thioredoxin, thioredoxi 99.1 1.1E-09 3.8E-14 85.7 11.9 101 166-276 14-114 (115)
35 2i4a_A Thioredoxin; acidophIle 99.1 9.1E-10 3.1E-14 85.1 11.1 98 166-273 9-106 (107)
36 2dzl_A Protein FAM100B; UBA-li 99.1 9.7E-11 3.3E-15 86.5 4.8 40 12-52 19-58 (66)
37 1sen_A Thioredoxin-like protei 99.1 2.1E-10 7E-15 98.0 7.5 120 153-280 22-153 (164)
38 1nsw_A Thioredoxin, TRX; therm 99.1 5.8E-10 2E-14 86.3 9.4 93 175-274 12-104 (105)
39 2trx_A Thioredoxin; electron t 99.1 8.5E-10 2.9E-14 85.7 10.4 98 167-274 10-107 (108)
40 2e0q_A Thioredoxin; electron t 99.1 2E-09 6.7E-14 82.3 12.2 98 166-275 6-103 (104)
41 1t00_A Thioredoxin, TRX; redox 99.1 8.6E-10 2.9E-14 86.4 10.3 93 176-275 19-111 (112)
42 2yzu_A Thioredoxin; redox prot 99.1 1.1E-09 3.8E-14 84.5 10.7 98 167-275 9-106 (109)
43 3hz4_A Thioredoxin; NYSGXRC, P 99.1 9.4E-10 3.2E-14 90.7 10.8 102 168-276 12-113 (140)
44 1x5d_A Protein disulfide-isome 99.1 1.3E-09 4.4E-14 87.8 11.3 100 167-276 15-118 (133)
45 3hxs_A Thioredoxin, TRXP; elec 99.0 1E-09 3.6E-14 89.7 10.7 90 179-275 50-139 (141)
46 3d6i_A Monothiol glutaredoxin- 99.0 1.4E-09 4.6E-14 85.4 10.7 97 167-275 9-109 (112)
47 3f3q_A Thioredoxin-1; His TAG, 99.0 1.5E-09 5.1E-14 85.6 11.0 89 174-273 18-108 (109)
48 3ul3_B Thioredoxin, thioredoxi 99.0 7E-10 2.4E-14 89.9 9.1 92 173-271 35-126 (128)
49 1fb6_A Thioredoxin M; electron 99.0 1.4E-09 4.7E-14 83.8 10.1 97 167-273 8-104 (105)
50 2o8v_B Thioredoxin 1; disulfid 99.0 1.1E-09 3.6E-14 89.4 9.7 99 166-274 29-127 (128)
51 3m9j_A Thioredoxin; oxidoreduc 99.0 2.1E-09 7.1E-14 82.9 10.9 96 167-273 9-104 (105)
52 2dj1_A Protein disulfide-isome 99.0 3.5E-09 1.2E-13 86.3 12.6 100 165-276 23-125 (140)
53 2ppt_A Thioredoxin-2; thiredox 99.0 1.9E-09 6.5E-14 91.1 11.2 98 167-275 55-152 (155)
54 4euy_A Uncharacterized protein 99.0 1.1E-09 3.7E-14 85.4 8.8 87 178-274 16-104 (105)
55 3aps_A DNAJ homolog subfamily 99.0 1.8E-09 6.1E-14 86.0 10.2 103 168-277 9-115 (122)
56 1r26_A Thioredoxin; redox-acti 99.0 2.6E-09 8.7E-14 87.0 11.1 97 167-276 28-124 (125)
57 2f51_A Thioredoxin; electron t 99.0 2.7E-09 9.3E-14 85.5 11.1 103 166-275 9-113 (118)
58 1xwb_A Thioredoxin; dimerizati 99.0 4.9E-09 1.7E-13 80.8 11.8 97 167-273 9-105 (106)
59 2i1u_A Thioredoxin, TRX, MPT46 99.0 9.4E-10 3.2E-14 87.2 7.6 93 174-273 24-116 (121)
60 3uvt_A Thioredoxin domain-cont 99.0 5E-09 1.7E-13 81.4 11.4 93 165-272 11-109 (111)
61 1syr_A Thioredoxin; SGPP, stru 99.0 4.1E-09 1.4E-13 83.0 11.0 95 166-273 16-110 (112)
62 1gh2_A Thioredoxin-like protei 99.0 5.8E-09 2E-13 81.2 11.3 98 166-274 9-106 (107)
63 2b5x_A YKUV protein, TRXY; thi 99.0 4.9E-09 1.7E-13 85.1 11.2 98 175-276 24-146 (148)
64 3qou_A Protein YBBN; thioredox 99.0 4.4E-09 1.5E-13 96.3 12.1 103 163-274 11-113 (287)
65 3raz_A Thioredoxin-related pro 98.9 5.9E-09 2E-13 86.2 11.4 99 176-281 20-146 (151)
66 2xc2_A Thioredoxinn; oxidoredu 98.9 5.8E-09 2E-13 82.7 10.8 94 167-273 22-116 (117)
67 3gix_A Thioredoxin-like protei 98.9 1.4E-09 4.7E-14 91.4 7.5 100 168-276 13-122 (149)
68 2j23_A Thioredoxin; immune pro 98.9 4.4E-09 1.5E-13 84.4 9.8 96 167-274 24-120 (121)
69 2wz9_A Glutaredoxin-3; protein 98.9 8.2E-09 2.8E-13 86.4 11.6 97 167-276 21-119 (153)
70 2oe3_A Thioredoxin-3; electron 98.9 9.4E-09 3.2E-13 81.9 11.3 91 172-271 22-112 (114)
71 1v98_A Thioredoxin; oxidoreduc 98.9 8.8E-09 3E-13 84.4 11.3 98 167-275 41-138 (140)
72 2lja_A Putative thiol-disulfid 98.9 1E-08 3.5E-13 84.2 11.5 99 178-280 28-148 (152)
73 3apq_A DNAJ homolog subfamily 98.9 8.5E-09 2.9E-13 90.8 11.5 101 166-277 104-204 (210)
74 3emx_A Thioredoxin; structural 98.9 5.9E-09 2E-13 85.5 9.5 100 167-280 24-131 (135)
75 2vim_A Thioredoxin, TRX; thior 98.9 2.1E-08 7.3E-13 76.8 12.0 94 167-273 8-103 (104)
76 2f9s_A Thiol-disulfide oxidore 98.9 1E-08 3.5E-13 84.4 10.9 95 178-276 24-139 (151)
77 2l6c_A Thioredoxin; oxidoreduc 98.9 8E-09 2.7E-13 81.5 9.8 95 166-275 10-106 (110)
78 1zzo_A RV1677; thioredoxin fol 98.9 8E-09 2.7E-13 82.5 9.5 90 178-275 23-135 (136)
79 1lu4_A Soluble secreted antige 98.9 7.4E-09 2.5E-13 83.0 9.1 90 177-274 21-135 (136)
80 3cxg_A Putative thioredoxin; m 98.9 5.9E-09 2E-13 85.5 8.6 97 167-275 29-129 (133)
81 1kng_A Thiol:disulfide interch 98.9 2.6E-09 9E-14 88.0 6.3 94 176-276 38-153 (156)
82 1zma_A Bacterocin transport ac 98.9 1.8E-08 6.2E-13 80.0 11.0 86 177-270 26-116 (118)
83 1faa_A Thioredoxin F; electron 98.9 2E-08 6.9E-13 80.2 11.2 99 164-274 23-123 (124)
84 1wmj_A Thioredoxin H-type; str 98.9 9.5E-10 3.3E-14 88.3 3.3 100 166-276 22-123 (130)
85 3dxb_A Thioredoxin N-terminall 98.9 8E-09 2.7E-13 91.9 9.6 104 165-278 18-121 (222)
86 2pu9_C TRX-F, thioredoxin F-ty 98.9 1.4E-08 4.9E-13 79.5 10.0 100 165-274 11-110 (111)
87 2av4_A Thioredoxin-like protei 98.8 7.7E-09 2.6E-13 88.8 8.8 98 167-276 30-140 (160)
88 3erw_A Sporulation thiol-disul 98.8 7.5E-09 2.6E-13 83.7 8.3 88 179-270 33-144 (145)
89 4evm_A Thioredoxin family prot 98.8 1.2E-08 4.2E-13 81.1 9.3 91 178-272 20-136 (138)
90 1oaz_A Thioredoxin 1; immune s 98.8 3.4E-09 1.2E-13 85.9 5.9 98 166-273 10-121 (123)
91 3lor_A Thiol-disulfide isomera 98.8 3E-08 1E-12 82.1 11.4 97 173-276 23-156 (160)
92 1mek_A Protein disulfide isome 98.8 5.2E-09 1.8E-13 82.1 6.2 99 165-274 13-116 (120)
93 3h79_A Thioredoxin-like protei 98.8 2.7E-08 9.1E-13 80.2 10.4 98 165-272 21-125 (127)
94 2b1k_A Thiol:disulfide interch 98.8 8.9E-09 3E-13 86.5 7.8 92 178-276 49-161 (168)
95 3or5_A Thiol:disulfide interch 98.8 5E-08 1.7E-12 81.0 12.3 97 178-278 32-154 (165)
96 3kh7_A Thiol:disulfide interch 98.8 1.5E-08 5.1E-13 86.7 9.3 95 175-276 53-168 (176)
97 2qsi_A Putative hydrogenase ex 98.8 7.4E-08 2.5E-12 80.8 13.2 101 163-276 19-124 (137)
98 1qgv_A Spliceosomal protein U5 98.8 2.4E-08 8.2E-13 83.1 9.6 91 179-276 22-122 (142)
99 3fkf_A Thiol-disulfide oxidore 98.8 2E-08 7E-13 81.6 8.8 90 179-275 32-146 (148)
100 2yj7_A LPBCA thioredoxin; oxid 98.3 7.5E-10 2.6E-14 84.9 0.0 94 173-273 12-105 (106)
101 3gl3_A Putative thiol:disulfid 98.8 1E-07 3.5E-12 78.1 12.5 99 175-277 23-144 (152)
102 2qgv_A Hydrogenase-1 operon pr 98.7 5.2E-08 1.8E-12 82.0 10.6 100 163-276 21-126 (140)
103 3lwa_A Secreted thiol-disulfid 98.7 7.9E-08 2.7E-12 82.0 11.9 95 178-276 57-182 (183)
104 2l5o_A Putative thioredoxin; s 98.7 5.4E-08 1.9E-12 79.9 10.4 96 178-277 26-143 (153)
105 3hcz_A Possible thiol-disulfid 98.7 1.8E-08 6.1E-13 81.9 7.3 94 178-275 29-146 (148)
106 2dbc_A PDCL2, unnamed protein 98.7 1.9E-08 6.6E-13 82.7 7.5 81 167-261 18-100 (135)
107 2lrn_A Thiol:disulfide interch 98.7 1.2E-07 4E-12 78.3 12.3 92 179-277 28-143 (152)
108 3eyt_A Uncharacterized protein 98.7 5.9E-08 2E-12 80.3 10.3 95 175-276 23-153 (158)
109 2dj0_A Thioredoxin-related tra 98.7 2.2E-08 7.6E-13 81.8 7.6 93 165-266 13-112 (137)
110 3ia1_A THIO-disulfide isomeras 98.7 4.8E-08 1.7E-12 80.4 9.7 92 181-279 31-148 (154)
111 3kcm_A Thioredoxin family prot 98.7 7.3E-08 2.5E-12 79.2 10.7 99 177-279 25-147 (154)
112 2djj_A PDI, protein disulfide- 98.7 1.7E-08 5.8E-13 80.0 6.5 89 178-275 23-117 (121)
113 1x5e_A Thioredoxin domain cont 98.7 6.8E-08 2.3E-12 77.4 9.9 97 165-275 13-110 (126)
114 2h30_A Thioredoxin, peptide me 98.7 2.5E-08 8.5E-13 82.9 7.2 97 176-275 34-156 (164)
115 3q6o_A Sulfhydryl oxidase 1; p 98.7 1.1E-07 3.6E-12 85.5 11.7 106 165-278 18-130 (244)
116 2ggt_A SCO1 protein homolog, m 98.7 2E-07 6.7E-12 77.4 11.8 95 179-277 22-163 (164)
117 1a8l_A Protein disulfide oxido 98.7 2E-07 6.7E-12 82.0 12.3 92 176-274 129-225 (226)
118 1jfu_A Thiol:disulfide interch 98.7 2.2E-07 7.7E-12 79.2 12.1 95 178-276 58-181 (186)
119 2dj3_A Protein disulfide-isome 98.7 4.6E-08 1.6E-12 78.9 7.2 92 179-276 24-119 (133)
120 3ed3_A Protein disulfide-isome 98.6 7.3E-08 2.5E-12 90.1 9.5 101 167-275 25-142 (298)
121 3idv_A Protein disulfide-isome 98.6 2.6E-07 9E-12 81.6 11.5 100 165-276 21-123 (241)
122 3hdc_A Thioredoxin family prot 98.6 1.7E-07 5.8E-12 78.0 9.7 91 178-272 39-149 (158)
123 3ha9_A Uncharacterized thiored 98.6 2.8E-07 9.6E-12 76.9 10.9 88 178-274 35-163 (165)
124 3ewl_A Uncharacterized conserv 98.6 2.3E-07 7.8E-12 75.3 9.6 92 178-273 25-139 (142)
125 2lrt_A Uncharacterized protein 98.6 2.3E-07 7.8E-12 77.2 9.8 90 179-272 34-145 (152)
126 3t58_A Sulfhydryl oxidase 1; o 98.6 2.6E-07 8.8E-12 93.1 11.5 118 155-278 6-130 (519)
127 2rli_A SCO2 protein homolog, m 98.6 5.3E-07 1.8E-11 75.4 11.5 95 179-277 25-166 (171)
128 3fw2_A Thiol-disulfide oxidore 98.6 3.1E-07 1E-11 75.6 9.8 88 179-276 32-149 (150)
129 1nho_A Probable thioredoxin; b 98.6 1.7E-07 5.9E-12 69.3 7.4 81 183-274 4-84 (85)
130 3eur_A Uncharacterized protein 98.5 2.3E-07 7.9E-12 75.7 7.8 80 179-259 30-132 (142)
131 1i5g_A Tryparedoxin II; electr 98.5 5.1E-07 1.7E-11 73.6 9.8 77 177-256 25-125 (144)
132 1fo5_A Thioredoxin; disulfide 98.5 2.5E-07 8.4E-12 68.4 6.8 82 181-273 3-84 (85)
133 2es7_A Q8ZP25_salty, putative 98.5 3.3E-07 1.1E-11 76.7 8.3 101 164-278 22-128 (142)
134 1wou_A Thioredoxin -related pr 98.5 1.6E-07 5.5E-12 75.6 6.2 89 168-267 14-117 (123)
135 3s9f_A Tryparedoxin; thioredox 98.5 5.5E-07 1.9E-11 76.2 9.6 78 176-256 44-145 (165)
136 1o8x_A Tryparedoxin, TRYX, TXN 98.5 7.4E-07 2.5E-11 73.0 9.8 79 176-257 24-126 (146)
137 2ywi_A Hypothetical conserved 98.5 5.5E-07 1.9E-11 77.3 9.2 97 179-279 44-178 (196)
138 1o73_A Tryparedoxin; electron 98.5 6.9E-07 2.4E-11 72.6 9.3 80 175-257 23-126 (144)
139 3kp8_A Vkorc1/thioredoxin doma 98.5 8.3E-08 2.8E-12 76.3 3.5 86 171-270 3-90 (106)
140 2hyx_A Protein DIPZ; thioredox 98.4 7.4E-07 2.5E-11 85.6 10.2 95 178-276 80-200 (352)
141 2r2j_A Thioredoxin domain-cont 98.4 1.3E-06 4.4E-11 83.8 11.8 100 166-276 12-118 (382)
142 2b5e_A Protein disulfide-isome 98.4 1.1E-06 3.8E-11 86.9 11.7 100 165-275 20-122 (504)
143 1a0r_P Phosducin, MEKA, PP33; 98.4 1.6E-07 5.4E-12 86.0 4.6 100 167-278 121-225 (245)
144 2cvb_A Probable thiol-disulfid 98.4 8.9E-07 3E-11 75.7 8.7 94 179-279 32-163 (188)
145 3f8u_A Protein disulfide-isome 98.4 6.9E-07 2.4E-11 87.7 9.0 103 164-276 357-462 (481)
146 3f8u_A Protein disulfide-isome 98.4 5E-07 1.7E-11 88.7 8.0 103 166-276 8-110 (481)
147 3idv_A Protein disulfide-isome 98.4 2.7E-06 9.2E-11 75.0 11.8 98 166-275 137-237 (241)
148 2p5q_A Glutathione peroxidase 98.4 2.2E-06 7.4E-11 71.4 10.1 93 179-275 31-168 (170)
149 1ilo_A Conserved hypothetical 98.4 1.3E-06 4.6E-11 63.5 7.7 74 183-270 2-76 (77)
150 2vup_A Glutathione peroxidase- 98.4 2.4E-06 8.1E-11 73.7 10.6 94 179-276 47-186 (190)
151 3iv4_A Putative oxidoreductase 98.3 3.1E-06 1.1E-10 68.5 10.5 85 178-270 22-111 (112)
152 3drn_A Peroxiredoxin, bacterio 98.3 1.7E-06 5.9E-11 72.4 9.3 93 179-275 27-145 (161)
153 3bq3_A Defective in cullin ned 98.3 2E-07 6.7E-12 86.5 3.6 44 8-52 13-56 (270)
154 2bmx_A Alkyl hydroperoxidase C 98.3 1.7E-06 6E-11 74.8 9.4 93 179-275 44-170 (195)
155 4fo5_A Thioredoxin-like protei 98.3 5.1E-07 1.7E-11 73.7 5.4 83 178-270 30-140 (143)
156 3cmi_A Peroxiredoxin HYR1; thi 98.3 1.5E-06 5.3E-11 73.3 8.6 93 179-276 31-169 (171)
157 2trc_P Phosducin, MEKA, PP33; 98.3 1.3E-06 4.4E-11 78.1 8.3 99 167-277 108-211 (217)
158 1sji_A Calsequestrin 2, calseq 98.3 2.3E-06 7.7E-11 81.0 10.3 96 167-274 19-121 (350)
159 3uem_A Protein disulfide-isome 98.3 1.3E-06 4.5E-11 82.4 8.4 97 165-271 255-353 (361)
160 3evi_A Phosducin-like protein 98.3 1.7E-06 5.9E-11 70.2 7.9 98 166-277 10-112 (118)
161 1we0_A Alkyl hydroperoxide red 98.3 2.4E-06 8.2E-11 73.2 9.0 94 179-276 30-158 (187)
162 2v1m_A Glutathione peroxidase; 98.3 5E-06 1.7E-10 69.1 10.8 94 179-276 30-168 (169)
163 3us3_A Calsequestrin-1; calciu 98.2 4.1E-06 1.4E-10 80.1 10.6 99 165-275 19-124 (367)
164 1xvw_A Hypothetical protein RV 98.2 2E-06 7E-11 71.3 7.3 86 179-271 34-156 (160)
165 2ywm_A Glutaredoxin-like prote 98.2 7.1E-06 2.4E-10 72.3 11.1 86 178-276 134-221 (229)
166 3dwv_A Glutathione peroxidase- 98.2 4E-06 1.4E-10 72.2 8.4 95 178-276 44-184 (187)
167 1zof_A Alkyl hydroperoxide-red 98.2 4.4E-06 1.5E-10 72.3 8.7 94 179-275 32-161 (198)
168 1z6n_A Hypothetical protein PA 98.2 4.7E-06 1.6E-10 71.6 8.7 85 178-273 52-141 (167)
169 2k6v_A Putative cytochrome C o 98.2 4.5E-06 1.5E-10 69.6 8.3 88 178-273 33-171 (172)
170 1a8l_A Protein disulfide oxido 98.2 1.3E-05 4.6E-10 70.1 11.1 92 178-275 20-113 (226)
171 2ls5_A Uncharacterized protein 97.4 3.4E-07 1.2E-11 75.9 0.0 99 172-273 25-146 (159)
172 2obi_A PHGPX, GPX-4, phospholi 98.1 7.3E-06 2.5E-10 69.9 8.3 90 179-272 46-181 (183)
173 2b7k_A SCO1 protein; metalloch 98.1 2.2E-05 7.7E-10 68.3 11.3 97 178-278 39-182 (200)
174 3kij_A Probable glutathione pe 98.1 2E-05 6.7E-10 67.1 10.7 94 179-276 37-171 (180)
175 3u5r_E Uncharacterized protein 98.1 1.1E-05 3.8E-10 71.3 9.4 97 179-279 57-191 (218)
176 2h01_A 2-Cys peroxiredoxin; th 98.1 1E-05 3.4E-10 69.7 8.9 94 179-275 30-159 (192)
177 1uul_A Tryparedoxin peroxidase 98.1 1E-05 3.5E-10 70.4 8.7 94 179-275 35-165 (202)
178 3ga4_A Dolichyl-diphosphooligo 98.1 3.1E-05 1.1E-09 67.5 11.5 105 164-275 23-153 (178)
179 1qmv_A Human thioredoxin perox 98.1 1.4E-05 4.8E-10 69.1 9.4 93 179-275 33-163 (197)
180 3apo_A DNAJ homolog subfamily 98.1 3E-06 1E-10 88.3 6.0 98 166-274 123-220 (780)
181 2i81_A 2-Cys peroxiredoxin; st 98.1 1.7E-05 5.9E-10 70.1 10.0 93 179-274 51-179 (213)
182 1zye_A Thioredoxin-dependent p 98.1 1.5E-05 5E-10 70.8 9.5 95 179-276 55-186 (220)
183 3apo_A DNAJ homolog subfamily 98.1 1.2E-05 4.1E-10 83.7 10.3 102 168-276 663-768 (780)
184 2p31_A CL683, glutathione pero 98.1 5.1E-06 1.7E-10 71.0 6.1 92 179-274 48-180 (181)
185 2f8a_A Glutathione peroxidase 98.0 1.9E-05 6.6E-10 69.6 9.8 91 178-275 45-207 (208)
186 2djk_A PDI, protein disulfide- 98.0 3.9E-05 1.3E-09 62.5 10.7 96 166-275 13-115 (133)
187 1xzo_A BSSCO, hypothetical pro 98.0 4.4E-05 1.5E-09 63.7 11.1 93 179-275 32-172 (174)
188 3qcp_A QSOX from trypanosoma b 98.0 1E-05 3.5E-10 80.5 8.2 103 166-275 30-152 (470)
189 2b5e_A Protein disulfide-isome 98.0 8.6E-06 2.9E-10 80.5 7.5 99 166-276 365-468 (504)
190 2hls_A Protein disulfide oxido 98.0 3.7E-05 1.3E-09 69.4 11.0 87 179-276 137-227 (243)
191 2gs3_A PHGPX, GPX-4, phospholi 98.0 2.2E-05 7.6E-10 67.2 9.0 92 178-273 47-184 (185)
192 2lus_A Thioredoxion; CR-Trp16, 97.1 2.1E-06 7.2E-11 69.3 0.0 75 178-256 23-124 (143)
193 2jsy_A Probable thiol peroxida 97.8 8.4E-05 2.9E-09 62.0 9.7 89 179-274 43-166 (167)
194 2i3y_A Epididymal secretory gl 97.8 0.00017 5.8E-09 64.2 12.2 96 177-276 53-212 (215)
195 1n8j_A AHPC, alkyl hydroperoxi 97.8 0.00025 8.7E-09 60.9 12.1 122 179-303 29-184 (186)
196 3gkn_A Bacterioferritin comigr 97.8 0.0001 3.5E-09 61.1 9.1 91 179-272 34-159 (163)
197 3ztl_A Thioredoxin peroxidase; 97.8 3.8E-05 1.3E-09 68.1 6.9 91 178-272 67-195 (222)
198 2r37_A Glutathione peroxidase 97.8 0.00022 7.4E-09 63.0 11.7 35 241-276 160-194 (207)
199 2qc7_A ERP31, ERP28, endoplasm 97.7 0.00015 5E-09 66.0 10.4 97 165-274 11-118 (240)
200 1xvq_A Thiol peroxidase; thior 97.7 7.2E-05 2.5E-09 63.5 7.7 74 179-259 43-147 (175)
201 3me7_A Putative uncharacterize 97.7 0.00023 7.8E-09 60.2 10.7 98 179-280 27-167 (170)
202 2c0g_A ERP29 homolog, windbeut 97.7 0.00024 8.4E-09 64.8 11.4 98 164-275 21-132 (248)
203 1wjk_A C330018D20RIK protein; 97.7 8.6E-05 2.9E-09 57.9 7.0 83 179-275 14-96 (100)
204 2ywm_A Glutaredoxin-like prote 97.7 0.00021 7.2E-09 62.7 10.3 91 178-275 18-115 (229)
205 2e7p_A Glutaredoxin; thioredox 97.7 5.8E-05 2E-09 59.2 5.9 76 171-259 11-89 (116)
206 3a2v_A Probable peroxiredoxin; 97.7 0.00012 4.2E-09 66.8 8.9 94 179-275 32-162 (249)
207 3uem_A Protein disulfide-isome 97.6 0.00046 1.6E-08 64.8 12.1 121 148-276 106-231 (361)
208 1ttz_A Conserved hypothetical 97.6 0.00019 6.4E-09 55.0 7.6 76 184-276 3-78 (87)
209 2yzh_A Probable thiol peroxida 97.6 0.00066 2.3E-08 56.9 11.1 88 179-273 46-170 (171)
210 4g2e_A Peroxiredoxin; redox pr 97.5 0.00038 1.3E-08 58.1 9.4 91 178-271 28-154 (157)
211 4hde_A SCO1/SENC family lipopr 97.5 0.00096 3.3E-08 56.5 12.0 94 178-275 30-170 (170)
212 1z96_A DNA-damage, UBA-domain 97.5 0.00012 4.1E-09 47.7 4.9 37 10-48 4-40 (40)
213 2c0d_A Thioredoxin peroxidase 97.5 0.00058 2E-08 60.7 10.8 94 179-275 55-184 (221)
214 4gqc_A Thiol peroxidase, perox 97.5 0.00059 2E-08 57.6 10.3 95 178-275 31-160 (164)
215 3kp9_A Vkorc1/thioredoxin doma 97.5 3.5E-05 1.2E-09 72.1 2.2 89 167-271 186-276 (291)
216 2pn8_A Peroxiredoxin-4; thiore 97.5 0.00063 2.2E-08 59.8 10.3 90 179-275 47-177 (211)
217 1eej_A Thiol:disulfide interch 97.5 0.00028 9.7E-09 62.3 8.0 86 178-275 84-211 (216)
218 1v58_A Thiol:disulfide interch 97.5 0.00031 1E-08 63.3 8.2 94 177-278 94-236 (241)
219 1wj7_A Hypothetical protein (R 97.4 0.00015 5.3E-09 57.5 5.1 41 10-51 39-79 (104)
220 2a4v_A Peroxiredoxin DOT5; yea 97.4 0.00084 2.9E-08 55.5 9.6 93 179-276 34-155 (159)
221 3qpm_A Peroxiredoxin; oxidored 97.4 0.0012 3.9E-08 59.5 11.0 114 179-302 76-232 (240)
222 3ixr_A Bacterioferritin comigr 97.4 0.00076 2.6E-08 57.4 9.3 92 179-273 50-176 (179)
223 3gyk_A 27KDA outer membrane pr 97.3 0.0014 4.6E-08 55.1 9.9 85 178-275 20-173 (175)
224 3p7x_A Probable thiol peroxida 97.2 0.0016 5.3E-08 54.4 9.1 87 179-272 45-165 (166)
225 1psq_A Probable thiol peroxida 97.2 0.0018 6.3E-08 53.8 9.5 87 179-272 41-162 (163)
226 4gew_A 5'-tyrosyl-DNA phosphod 97.2 0.00019 6.7E-09 68.5 3.6 42 9-51 44-85 (362)
227 1oai_A Nuclear RNA export fact 97.1 0.00053 1.8E-08 49.1 4.7 41 8-49 5-45 (59)
228 3tjj_A Peroxiredoxin-4; thiore 97.1 0.00072 2.5E-08 61.6 6.4 118 179-302 90-246 (254)
229 1t3b_A Thiol:disulfide interch 97.0 0.002 6.8E-08 56.7 8.3 83 178-272 84-208 (211)
230 4f9z_D Endoplasmic reticulum r 97.0 0.016 5.4E-07 51.0 14.2 119 150-275 104-225 (227)
231 1q98_A Thiol peroxidase, TPX; 97.0 0.0027 9.4E-08 52.9 8.4 84 179-269 42-163 (165)
232 2g3q_A Protein YBL047C; endocy 96.9 0.0014 4.9E-08 43.5 5.2 39 10-50 4-42 (43)
233 3zrd_A Thiol peroxidase; oxido 96.9 0.0069 2.4E-07 52.6 11.2 86 178-270 76-199 (200)
234 1dv0_A DNA repair protein HHR2 96.9 0.00079 2.7E-08 45.9 3.9 42 9-52 3-44 (47)
235 1vg5_A RSGI RUH-014, rhomboid 96.9 0.0019 6.4E-08 48.2 5.9 42 9-52 28-69 (73)
236 3keb_A Probable thiol peroxida 96.9 0.0032 1.1E-07 56.6 8.5 118 179-314 47-210 (224)
237 2jp7_A MRNA export factor MEX6 96.8 0.0009 3.1E-08 47.5 3.6 41 9-50 5-45 (57)
238 1hyu_A AHPF, alkyl hydroperoxi 96.8 0.0066 2.3E-07 60.4 11.2 82 178-273 115-198 (521)
239 2hls_A Protein disulfide oxido 96.8 0.0062 2.1E-07 54.6 9.9 86 177-275 22-117 (243)
240 4eo3_A Bacterioferritin comigr 96.7 0.012 4.1E-07 55.4 11.7 124 178-313 22-176 (322)
241 1ify_A HHR23A, UV excision rep 96.7 0.0018 6E-08 44.5 4.3 40 9-50 7-46 (49)
242 2knz_A Ubiquilin-4; cytoplasm, 96.7 0.0027 9.2E-08 44.3 5.4 41 10-51 11-51 (53)
243 2fgx_A Putative thioredoxin; N 96.7 0.0033 1.1E-07 50.1 6.6 76 182-270 30-106 (107)
244 2dah_A Ubiquilin-3; UBA domain 96.7 0.0021 7.2E-08 45.1 4.8 42 10-52 9-50 (54)
245 1wji_A Tudor domain containing 96.7 0.0043 1.5E-07 44.9 6.3 41 10-52 9-49 (63)
246 1tp9_A Peroxiredoxin, PRX D (t 96.7 0.0074 2.5E-07 50.2 8.9 77 179-260 34-146 (162)
247 2k8s_A Thioredoxin; dimer, str 96.6 0.0024 8.2E-08 46.9 4.7 60 184-254 4-66 (80)
248 2bwb_A Ubiquitin-like protein 96.6 0.0036 1.2E-07 42.4 5.1 39 10-49 7-45 (46)
249 2v2g_A Peroxiredoxin 6; oxidor 96.6 0.0083 2.8E-07 53.8 8.9 92 180-274 28-164 (233)
250 1nm3_A Protein HI0572; hybrid, 96.5 0.016 5.4E-07 51.3 10.5 90 179-272 32-164 (241)
251 1veg_A NEDD8 ultimate buster-1 96.5 0.003 1E-07 48.2 4.8 41 10-52 29-69 (83)
252 2cq9_A GLRX2 protein, glutared 96.5 0.011 3.6E-07 48.0 8.5 75 167-254 14-91 (130)
253 3h93_A Thiol:disulfide interch 96.5 0.0084 2.9E-07 51.1 8.2 43 230-276 143-185 (192)
254 2jy5_A Ubiquilin-1; UBA, alter 96.3 0.0058 2E-07 42.4 5.1 40 10-50 12-51 (52)
255 1vej_A Riken cDNA 4931431F19; 96.3 0.0078 2.7E-07 44.9 5.9 42 10-52 29-70 (74)
256 1wr1_B Ubiquitin-like protein 96.2 0.006 2.1E-07 43.4 4.8 39 11-50 18-56 (58)
257 1wiv_A UBP14, ubiquitin-specif 96.1 0.0089 3E-07 44.4 5.6 42 9-52 28-69 (73)
258 2wfc_A Peroxiredoxin 5, PRDX5; 96.1 0.045 1.5E-06 46.0 10.5 87 179-270 30-159 (167)
259 2dkl_A Trinucleotide repeat co 96.0 0.011 3.7E-07 45.3 5.5 40 11-52 22-61 (85)
260 1ego_A Glutaredoxin; electron 96.0 0.021 7E-07 41.7 6.9 75 184-274 3-83 (85)
261 2cwb_A Chimera of immunoglobul 95.9 0.01 3.4E-07 47.5 5.3 41 10-51 66-106 (108)
262 2dak_A Ubiquitin carboxyl-term 95.9 0.0084 2.9E-07 43.1 4.4 44 7-52 6-49 (63)
263 2l2d_A OTU domain-containing p 95.9 0.014 4.8E-07 42.0 5.3 42 6-48 13-54 (73)
264 3hd5_A Thiol:disulfide interch 95.8 0.024 8.2E-07 48.3 7.8 39 179-223 24-65 (195)
265 3mng_A Peroxiredoxin-5, mitoch 95.8 0.043 1.5E-06 46.7 9.1 76 179-259 42-155 (173)
266 3uma_A Hypothetical peroxiredo 95.7 0.044 1.5E-06 47.1 9.0 86 179-269 55-183 (184)
267 1wgn_A UBAP1, ubiquitin associ 95.7 0.0096 3.3E-07 42.6 3.9 42 10-53 19-60 (63)
268 3sbc_A Peroxiredoxin TSA1; alp 95.6 0.084 2.9E-06 47.0 10.6 92 179-273 51-179 (216)
269 1prx_A HORF6; peroxiredoxin, h 95.6 0.094 3.2E-06 46.3 10.9 92 181-275 32-169 (224)
270 3gv1_A Disulfide interchange p 95.6 0.0042 1.4E-07 51.9 1.9 98 172-279 6-143 (147)
271 2dna_A Unnamed protein product 95.4 0.035 1.2E-06 40.5 6.0 42 11-53 20-61 (67)
272 2ooa_A E3 ubiquitin-protein li 95.3 0.03 1E-06 38.7 4.9 38 10-49 11-48 (52)
273 2cpw_A CBL-interacting protein 95.2 0.025 8.5E-07 40.9 4.6 41 10-52 19-60 (64)
274 2znm_A Thiol:disulfide interch 95.1 0.14 4.8E-06 43.3 10.2 42 229-276 140-181 (195)
275 1whc_A RSGI RUH-027, UBA/UBX 3 95.0 0.024 8.1E-07 41.0 4.0 41 10-52 9-50 (64)
276 3rhb_A ATGRXC5, glutaredoxin-C 94.9 0.1 3.5E-06 40.5 7.9 75 167-254 6-84 (113)
277 2dai_A Ubadc1, ubiquitin assoc 94.9 0.031 1E-06 42.5 4.6 41 10-52 29-69 (83)
278 1kte_A Thioltransferase; redox 94.8 0.072 2.5E-06 40.5 6.8 60 184-254 14-79 (105)
279 2pwj_A Mitochondrial peroxired 94.8 0.12 4.2E-06 43.3 8.8 56 179-236 42-101 (171)
280 2ht9_A Glutaredoxin-2; thiored 94.8 0.069 2.3E-06 44.3 7.0 74 168-254 37-113 (146)
281 2d9s_A CBL E3 ubiquitin protei 94.6 0.051 1.7E-06 37.7 4.7 40 10-51 9-48 (53)
282 1xcc_A 1-Cys peroxiredoxin; un 94.6 0.092 3.2E-06 46.3 7.7 93 179-274 29-165 (220)
283 2ekk_A UBA domain from E3 ubiq 94.5 0.055 1.9E-06 36.4 4.8 39 9-50 8-46 (47)
284 2hze_A Glutaredoxin-1; thiored 94.5 0.077 2.6E-06 41.5 6.4 69 173-254 12-86 (114)
285 3ic4_A Glutaredoxin (GRX-1); s 94.4 0.24 8E-06 36.6 8.7 73 184-271 14-91 (92)
286 3tue_A Tryparedoxin peroxidase 94.4 0.15 5E-06 45.5 8.6 92 179-273 55-183 (219)
287 2cp9_A EF-TS, EF-TSMT, elongat 94.3 0.039 1.3E-06 39.9 3.8 39 10-49 9-47 (64)
288 1r7h_A NRDH-redoxin; thioredox 94.2 0.27 9.2E-06 34.4 8.2 69 184-270 3-73 (75)
289 2dag_A Ubiquitin carboxyl-term 94.2 0.054 1.8E-06 40.2 4.4 42 9-52 8-50 (74)
290 1wgl_A TOLL-interacting protei 94.0 0.1 3.5E-06 37.1 5.4 44 10-53 9-52 (59)
291 1otr_A Protein CUE2; protein-p 93.9 0.082 2.8E-06 36.2 4.5 42 10-51 4-45 (49)
292 2cp8_A NEXT to BRCA1 gene 1 pr 93.8 0.09 3.1E-06 36.7 4.6 41 11-52 10-50 (54)
293 2rem_A Disulfide oxidoreductas 93.5 0.33 1.1E-05 40.7 8.9 41 229-276 145-185 (193)
294 3msz_A Glutaredoxin 1; alpha-b 93.4 0.35 1.2E-05 35.0 7.8 74 184-274 6-86 (89)
295 1jkg_B TAP; NTF2-like domain, 93.4 0.014 4.9E-07 53.1 0.0 42 9-51 197-238 (250)
296 3c1r_A Glutaredoxin-1; oxidize 93.3 0.23 7.9E-06 39.2 7.1 77 163-254 8-93 (118)
297 1vdl_A Ubiquitin carboxyl-term 93.3 0.39 1.3E-05 35.6 7.5 43 10-52 24-66 (80)
298 1fov_A Glutaredoxin 3, GRX3; a 93.0 0.28 9.6E-06 35.1 6.7 76 184-280 3-78 (82)
299 2yan_A Glutaredoxin-3; oxidore 92.9 0.38 1.3E-05 36.9 7.7 69 171-254 8-83 (105)
300 1h75_A Glutaredoxin-like prote 92.9 0.29 9.8E-06 35.1 6.5 65 184-266 3-69 (81)
301 1vek_A UBP14, ubiquitin-specif 92.5 0.16 5.3E-06 38.6 4.7 41 10-52 29-70 (84)
302 2klx_A Glutaredoxin; thioredox 92.3 0.28 9.7E-06 36.1 5.9 52 184-244 8-60 (89)
303 1z6m_A Conserved hypothetical 92.2 0.64 2.2E-05 38.4 8.8 36 229-271 139-174 (175)
304 2khp_A Glutaredoxin; thioredox 91.9 0.33 1.1E-05 35.8 5.9 51 184-244 8-61 (92)
305 2lbc_A Ubiquitin carboxyl-term 91.5 0.24 8.4E-06 40.1 5.1 42 9-52 77-118 (126)
306 3nzn_A Glutaredoxin; structura 91.0 1.1 3.7E-05 34.0 8.2 73 184-270 24-101 (103)
307 3q6o_A Sulfhydryl oxidase 1; p 90.6 1.4 4.8E-05 38.5 9.7 95 159-268 138-232 (244)
308 1wik_A Thioredoxin-like protei 90.2 0.84 2.9E-05 35.2 7.0 62 178-254 13-81 (109)
309 3bj5_A Protein disulfide-isome 90.2 1.9 6.4E-05 35.4 9.5 64 212-276 61-128 (147)
310 2crn_A Ubash3A protein; compac 90.0 0.28 9.5E-06 35.3 3.7 42 10-53 9-51 (64)
311 3h8q_A Thioredoxin reductase 3 89.8 1.2 4E-05 34.7 7.6 88 169-275 6-101 (114)
312 3ctg_A Glutaredoxin-2; reduced 89.6 0.71 2.4E-05 37.1 6.3 72 168-254 25-105 (129)
313 3qmx_A Glutaredoxin A, glutare 89.4 0.9 3.1E-05 34.7 6.5 60 184-254 18-78 (99)
314 4ae4_A Ubiquitin-associated pr 89.1 0.4 1.4E-05 38.6 4.4 38 12-51 78-115 (118)
315 2lqo_A Putative glutaredoxin R 88.6 2.4 8.3E-05 32.1 8.4 74 185-275 7-84 (92)
316 2dhy_A CUE domain-containing p 87.0 0.63 2.1E-05 33.8 3.9 43 9-51 17-59 (67)
317 2lva_A Ubiquitin carboxyl-term 86.4 0.14 4.7E-06 41.6 0.0 43 10-52 18-60 (129)
318 2juj_A E3 ubiquitin-protein li 86.2 0.94 3.2E-05 31.5 4.1 41 10-52 7-47 (56)
319 1tr8_A Conserved protein (MTH1 85.8 0.76 2.6E-05 36.1 4.0 35 10-45 65-99 (102)
320 1sji_A Calsequestrin 2, calseq 85.5 7.2 0.00025 35.9 11.5 119 149-275 216-346 (350)
321 2in3_A Hypothetical protein; D 85.4 2.3 8E-05 36.1 7.5 47 229-277 166-212 (216)
322 2wci_A Glutaredoxin-4; redox-a 85.0 1.9 6.6E-05 35.1 6.4 66 168-244 23-95 (135)
323 4f82_A Thioredoxin reductase; 84.9 2.5 8.5E-05 36.1 7.3 46 179-227 46-95 (176)
324 3kzq_A Putative uncharacterize 84.6 2.5 8.5E-05 36.1 7.3 46 229-276 159-204 (208)
325 2oo9_A E3 ubiquitin-protein li 83.7 1.9 6.6E-05 28.8 4.6 38 10-49 4-41 (46)
326 2axo_A Hypothetical protein AT 83.4 10 0.00035 34.6 11.1 82 182-276 44-144 (270)
327 3ipz_A Monothiol glutaredoxin- 82.9 3.8 0.00013 31.6 7.1 67 168-245 6-79 (109)
328 4dvc_A Thiol:disulfide interch 82.9 2.2 7.4E-05 35.0 6.0 56 203-275 127-182 (184)
329 3gx8_A Monothiol glutaredoxin- 82.8 4.4 0.00015 32.0 7.5 88 170-276 6-106 (121)
330 2wem_A Glutaredoxin-related pr 82.7 2.9 0.0001 33.1 6.4 67 167-245 7-82 (118)
331 3l4n_A Monothiol glutaredoxin- 82.0 3.9 0.00013 32.8 7.0 62 172-245 6-76 (127)
332 3us3_A Calsequestrin-1; calciu 79.5 6.8 0.00023 36.6 8.8 121 150-276 219-349 (367)
333 3f4s_A Alpha-DSBA1, putative u 78.8 4.5 0.00015 35.5 6.9 48 229-277 160-213 (226)
334 1un2_A DSBA, thiol-disulfide i 78.6 0.77 2.6E-05 39.6 1.7 56 180-235 113-171 (197)
335 3feu_A Putative lipoprotein; a 75.8 4.1 0.00014 34.3 5.5 44 228-275 141-184 (185)
336 3gmf_A Protein-disulfide isome 75.8 5.1 0.00018 34.6 6.3 58 203-280 144-202 (205)
337 3hz8_A Thiol:disulfide interch 75.3 2 7E-05 36.4 3.5 39 179-223 23-64 (193)
338 3gha_A Disulfide bond formatio 74.5 5 0.00017 34.4 5.8 43 228-277 152-194 (202)
339 1nm3_A Protein HI0572; hybrid, 74.2 8.5 0.00029 33.3 7.4 67 167-245 153-225 (241)
340 1aip_C EF-TS, elongation facto 73.2 3.4 0.00012 36.1 4.4 40 10-50 3-42 (196)
341 2h8l_A Protein disulfide-isome 71.8 23 0.00077 30.9 9.7 117 149-276 104-231 (252)
342 1xiy_A Peroxiredoxin, pfaop; a 71.8 7.7 0.00026 33.0 6.3 46 179-227 42-92 (182)
343 3zyw_A Glutaredoxin-3; metal b 71.7 15 0.0005 28.4 7.5 65 168-245 4-77 (111)
344 4ae4_A Ubiquitin-associated pr 71.4 4.6 0.00016 32.3 4.5 41 8-50 6-46 (118)
345 1oqy_A HHR23A, UV excision rep 71.0 2.4 8.3E-05 40.5 3.2 42 9-52 167-208 (368)
346 2qho_B E3 ubiquitin-protein li 69.6 10 0.00035 25.7 5.1 44 9-52 8-51 (53)
347 1xb2_B EF-TS, elongation facto 68.3 4.2 0.00014 37.7 4.1 38 11-49 5-42 (291)
348 2r2j_A Thioredoxin domain-cont 67.8 17 0.00058 33.8 8.4 114 151-276 211-330 (382)
349 3t58_A Sulfhydryl oxidase 1; o 67.7 5.9 0.0002 39.3 5.3 79 177-268 154-232 (519)
350 2di0_A Activating signal coint 66.3 12 0.00043 27.2 5.4 44 8-51 11-54 (71)
351 3bci_A Disulfide bond protein 66.1 7 0.00024 32.4 4.8 41 229-276 139-179 (186)
352 1aba_A Glutaredoxin; electron 65.7 13 0.00045 26.8 5.7 49 187-245 5-70 (87)
353 3fv6_A YQZB protein; CBS domai 64.5 6.1 0.00021 31.7 4.0 121 156-282 22-154 (159)
354 3l9v_A Putative thiol-disulfid 62.5 5.9 0.0002 33.3 3.7 44 181-224 15-60 (189)
355 1t1v_A SH3BGRL3, SH3 domain-bi 62.2 21 0.00072 26.1 6.4 56 186-245 6-66 (93)
356 3hz8_A Thiol:disulfide interch 59.9 17 0.0006 30.4 6.2 42 228-276 143-184 (193)
357 2h8l_A Protein disulfide-isome 59.8 67 0.0023 27.8 10.3 100 158-272 5-110 (252)
358 2xhf_A Peroxiredoxin 5; oxidor 59.6 7.1 0.00024 32.9 3.6 57 179-237 41-100 (171)
359 2ct6_A SH3 domain-binding glut 58.6 23 0.00078 27.1 6.2 55 186-244 12-77 (111)
360 3c7m_A Thiol:disulfide interch 54.5 6.6 0.00022 32.4 2.5 41 231-275 154-194 (195)
361 3sl7_A CBS domain-containing p 53.9 27 0.00091 27.9 6.2 65 205-277 97-161 (180)
362 4gqw_A CBS domain-containing p 53.5 35 0.0012 26.2 6.7 102 166-275 23-146 (152)
363 3gl5_A Putative DSBA oxidoredu 52.2 34 0.0012 29.9 7.0 42 229-276 173-214 (239)
364 3gn3_A Putative protein-disulf 51.2 11 0.00036 31.8 3.4 38 229-270 144-181 (182)
365 1p3q_Q VPS9P, vacuolar protein 51.2 6.1 0.00021 27.4 1.5 41 9-49 11-51 (54)
366 2l4c_A Endoplasmic reticulum r 51.2 86 0.0029 24.5 11.8 89 167-270 27-119 (124)
367 2o16_A Acetoin utilization pro 50.7 53 0.0018 26.0 7.5 102 166-276 21-139 (160)
368 3kxr_A Magnesium transporter, 48.8 25 0.00086 29.8 5.4 110 158-275 61-177 (205)
369 3l9v_A Putative thiol-disulfid 48.5 41 0.0014 27.9 6.7 45 228-276 134-184 (189)
370 2p9m_A Hypothetical protein MJ 48.1 40 0.0014 25.6 6.1 99 166-272 24-136 (138)
371 2cos_A Serine/threonine protei 46.3 24 0.00083 24.3 3.8 39 8-48 7-46 (54)
372 1u6t_A SH3 domain-binding glut 44.8 38 0.0013 26.9 5.5 57 183-244 2-69 (121)
373 2lbc_A Ubiquitin carboxyl-term 44.2 18 0.00063 28.7 3.6 41 10-52 3-44 (126)
374 1pbj_A Hypothetical protein; s 43.0 45 0.0015 24.7 5.6 96 165-271 16-121 (125)
375 1q02_A Sequestosome 1; helical 41.8 16 0.00056 25.0 2.4 35 11-47 11-47 (52)
376 3feu_A Putative lipoprotein; a 41.3 24 0.00082 29.4 4.0 41 180-223 22-62 (185)
377 2yzi_A Hypothetical protein PH 40.3 26 0.0009 26.7 3.9 99 166-274 23-131 (138)
378 1yav_A Hypothetical protein BS 39.5 37 0.0013 26.7 4.8 101 166-276 32-146 (159)
379 2imf_A HCCA isomerase, 2-hydro 38.9 40 0.0014 28.2 5.1 41 229-276 157-197 (203)
380 3gby_A Uncharacterized protein 38.3 15 0.00052 27.9 2.1 108 155-272 9-126 (128)
381 3tdg_A DSBG, putative uncharac 38.0 15 0.0005 33.7 2.2 25 178-202 145-169 (273)
382 2ef7_A Hypothetical protein ST 38.0 34 0.0012 25.8 4.2 101 166-276 20-129 (133)
383 3kpb_A Uncharacterized protein 37.9 23 0.00079 26.3 3.1 109 155-271 5-119 (122)
384 3l9s_A Thiol:disulfide interch 37.7 55 0.0019 27.3 5.8 31 228-262 140-170 (191)
385 2oux_A Magnesium transporter; 37.2 82 0.0028 28.0 7.2 113 155-275 141-262 (286)
386 3q8g_A CRAL-TRIO domain-contai 37.1 34 0.0012 31.4 4.7 42 8-49 37-84 (320)
387 1aua_A Phosphatidylinositol tr 35.4 49 0.0017 29.5 5.4 41 8-48 28-74 (296)
388 4dbg_B Ring finger protein 31; 35.2 26 0.0009 29.5 3.2 37 10-47 102-138 (162)
389 3lqn_A CBS domain protein; csg 34.8 31 0.0011 26.8 3.6 101 166-276 33-147 (150)
390 3nqr_A Magnesium and cobalt ef 33.9 96 0.0033 23.2 6.2 95 166-270 21-124 (127)
391 3ec3_A Protein disulfide-isome 33.5 2.3E+02 0.0078 24.3 10.5 68 168-248 13-81 (250)
392 4fry_A Putative signal-transdu 32.0 75 0.0026 24.7 5.5 98 165-273 28-136 (157)
393 1y5h_A Hypothetical protein RV 31.1 57 0.0019 24.5 4.5 95 166-270 24-129 (133)
394 2hc5_A ORF 99, hypothetical pr 30.9 58 0.002 25.8 4.4 31 239-273 67-97 (117)
395 1v95_A Nuclear receptor coacti 30.1 25 0.00084 28.6 2.1 75 207-282 26-113 (130)
396 3fz5_A Possible 2-hydroxychrom 29.5 99 0.0034 25.8 6.1 50 202-271 149-198 (202)
397 3kts_A Glycerol uptake operon 28.6 43 0.0015 28.9 3.5 99 167-276 41-151 (192)
398 3l9s_A Thiol:disulfide interch 28.6 47 0.0016 27.7 3.8 44 181-224 22-67 (191)
399 3k2v_A Putative D-arabinose 5- 28.5 76 0.0026 24.6 4.9 106 153-267 30-147 (149)
400 2j9u_A VPS28, vacuolar protein 28.4 27 0.00092 26.9 2.0 24 22-49 70-93 (96)
401 2j9l_A Chloride channel protei 28.0 67 0.0023 25.6 4.6 64 204-276 106-169 (185)
402 3lv9_A Putative transporter; C 28.0 84 0.0029 24.2 5.1 98 166-272 41-145 (148)
403 1vkf_A Glycerol uptake operon 27.3 46 0.0016 28.6 3.5 72 167-248 43-114 (188)
404 4f9z_D Endoplasmic reticulum r 25.9 2.9E+02 0.0099 23.1 9.5 94 160-271 11-108 (227)
405 2pfi_A Chloride channel protei 25.6 2.3E+02 0.0077 21.7 7.9 101 166-275 29-150 (164)
406 2nyc_A Nuclear protein SNF4; b 25.5 1.5E+02 0.0052 22.2 6.1 98 166-271 27-140 (144)
407 3ihp_A Ubiquitin carboxyl-term 25.2 68 0.0023 33.8 5.0 40 10-51 720-759 (854)
408 2rc3_A CBS domain; in SITU pro 24.9 38 0.0013 25.7 2.4 96 166-271 25-130 (135)
409 2rih_A Conserved protein with 24.8 53 0.0018 25.1 3.2 108 155-272 9-128 (141)
410 2j9w_A VPS28, VPS28-PROV prote 24.7 39 0.0013 26.3 2.3 24 22-49 75-98 (102)
411 1olm_A SEC14-like protein 2; l 24.6 76 0.0026 29.7 4.9 42 8-49 10-58 (403)
412 3lhh_A CBS domain protein; str 24.2 77 0.0026 25.4 4.3 98 166-272 60-164 (172)
413 2x8g_A Thioredoxin glutathione 24.2 1.4E+02 0.0048 29.3 6.9 63 170-244 8-76 (598)
414 1wj6_A KIAA0049 protein, RSGI 24.2 49 0.0017 25.7 2.7 29 162-190 67-95 (101)
415 2bkf_A Zinc-finger protein NBR 24.0 54 0.0018 24.8 2.9 28 162-189 59-86 (87)
416 1un2_A DSBA, thiol-disulfide i 22.3 2E+02 0.0069 24.0 6.7 35 203-254 27-61 (197)
417 1g63_A Epidermin modifying enz 21.3 87 0.003 26.5 4.1 66 177-274 104-176 (181)
418 1r4w_A Glutathione S-transfera 21.3 3E+02 0.01 23.0 7.8 40 229-271 172-211 (226)
419 3ec3_A Protein disulfide-isome 20.8 3.5E+02 0.012 23.0 8.2 115 150-276 107-229 (250)
420 2l3n_A DNA-binding protein RAP 20.7 2.4E+02 0.0082 20.8 5.8 44 9-53 13-56 (104)
421 3jtf_A Magnesium and cobalt ef 20.6 1.8E+02 0.0063 21.6 5.6 98 166-272 23-126 (129)
422 3p04_A Uncharacterized BCR; SE 20.4 49 0.0017 24.9 2.0 31 160-190 6-38 (87)
423 1o50_A CBS domain-containing p 20.2 1.2E+02 0.004 23.7 4.5 62 203-273 93-154 (157)
No 1
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=100.00 E-value=6.6e-33 Score=238.39 Aligned_cols=136 Identities=42% Similarity=0.833 Sum_probs=127.8
Q ss_pred ccchhHHhhhhhcCCCccccccccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecC
Q 020843 145 TADSSRDNLASLYRPPFHLMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDD 224 (320)
Q Consensus 145 ~~~s~~~~l~~lf~Ppf~~~~~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~ 224 (320)
+.+++.++|+.+|+||+.+++.++|++|++.|++++|||||+|+++||+.|++|+|+||+|++|+++|++|||+|++|++
T Consensus 7 ~~~~~~~~l~~lf~~p~~~~~~~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~ 86 (153)
T 2dlx_A 7 GIDKKLTTLADLFRPPIDLMHKGSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHD 86 (153)
T ss_dssp CCCCCCCCCCCTTSCCTTTSCCSCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESS
T ss_pred CCCchhhHHHHhhCCchhhhcccCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecC
Confidence 34567789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhcCC-Ccc
Q 020843 225 TSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDGGP-REQ 281 (320)
Q Consensus 225 s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~~~-~d~ 281 (320)
++++..++++|++..+|+++||||.||+.+.+|.| +++++|++.|..+++++. .++
T Consensus 87 ~~~~~~l~~~y~v~~~P~~~fld~~~G~~l~~~~g-~~~~~fl~~L~~~l~~~~~~~~ 143 (153)
T 2dlx_A 87 SEEGQRYIQFYKLGDFPYVSILDPRTGQKLVEWHQ-LDVSSFLDQVTGFLGEHGQLDG 143 (153)
T ss_dssp SHHHHHHHHHHTCCSSSEEEEECTTTCCCCEEESS-CCHHHHHHHHHHHHHHTCSCSS
T ss_pred CHhHHHHHHHcCCCCCCEEEEEeCCCCcEeeecCC-CCHHHHHHHHHHHHHhcCCCCC
Confidence 99999999999999999999999988998988876 999999999999998765 443
No 2
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.95 E-value=2.3e-27 Score=208.70 Aligned_cols=130 Identities=21% Similarity=0.276 Sum_probs=112.7
Q ss_pred HHhhhhhcCCCccccccccHHHHHHHH----HhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCC
Q 020843 150 RDNLASLYRPPFHLMFNGSFEKAKDAA----SVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDT 225 (320)
Q Consensus 150 ~~~l~~lf~Ppf~~~~~gsf~~A~~~A----k~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s 225 (320)
.+.+.+.|.+++..|+.|+|++|+++| ++++||||||||+++|++|+.|||+||+|++|.++|++|||+|++|+++
T Consensus 21 ~~~f~~~yg~~~p~F~~gs~~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~nfV~w~~dv~~ 100 (178)
T 2ec4_A 21 TAEFSSRYGDCHPVFFIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQNFITWAWDLTK 100 (178)
T ss_dssp HHHHHHHHCSCCCCCCCSCHHHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHHTEEEEEEECCS
T ss_pred HHHHHHHhCCCCCCeeeCCHHHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHcCEEEEEEeCCC
Confidence 344445554444455679999999999 9999999999999999999999999999999999999999999999999
Q ss_pred hH-------------HHHHHHH---cCCCCCcEEEEEecCC--CceEEEEecCCChHHHHHHHHHHHhcCCC
Q 020843 226 SE-------------GKKVCTY---YKLDSIPVVLVVDPIT--GQKMRSWCGMVQPESLLEDLVPFMDGGPR 279 (320)
Q Consensus 226 ~e-------------g~~~~~~---Y~v~~~P~i~Iidp~t--G~~v~~~~G~~~~~~fl~~L~~fld~~~~ 279 (320)
++ |.+++.. |++.+||+++||+|+. ++.+.+++|.+++++|++.|.++++++..
T Consensus 101 ~e~~~~~~~~~~~~~g~~~a~~~~~~~~~~~P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~~e~~~~ 172 (178)
T 2ec4_A 101 DSNRARFLTMCNRHFGSVVAQTIRTQKTDQFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAMEIFTA 172 (178)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHSCSTTCSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHHHHHHHH
T ss_pred chhhhhhhhhhhhhhHHHHHHHHhhcCCCCCCeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHHHHHhhH
Confidence 99 4466654 8999999999999863 25578899999999999999999998653
No 3
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.64 E-value=7.6e-16 Score=131.56 Aligned_cols=111 Identities=11% Similarity=0.223 Sum_probs=99.4
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChH------------------
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSE------------------ 227 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~e------------------ 227 (320)
-.+|+++++.|+.++|++||+|+++||.+|+.|.+.+|.++.+.+.++++|+++.++.++..
T Consensus 33 ~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~ 112 (172)
T 3f9u_A 33 FDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKTPLTEPVKIMENGTERTLR 112 (172)
T ss_dssp BSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCCCEEEEEEEEEETTEEEEEE
T ss_pred hhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcccccchhhhhhhcchhhhhh
Confidence 46899999999999999999999999999999999999999999999999999999987532
Q ss_pred ------HHHHHHHcCCCCCcEEEEEecCCCceEEEEecCCC-hHHHHHHHHHHHhcC
Q 020843 228 ------GKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQ-PESLLEDLVPFMDGG 277 (320)
Q Consensus 228 ------g~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~-~~~fl~~L~~fld~~ 277 (320)
+.-.++.|++..+|+++|||+ .|+.+.+..|+.+ +++|++.|.+.++++
T Consensus 113 ~~~~~~~~~~~~~~~v~~~Pt~~lid~-~G~~~~~~~G~~~~~~~l~~~l~~~l~~~ 168 (172)
T 3f9u_A 113 TVGDKWSYLQRVKFGANAQPFYVLIDN-EGNPLNKSYAYDEDISKYINFLQTGLENY 168 (172)
T ss_dssp EHHHHHHHHHHHHHSCCCSSEEEEECT-TSCBSSCCBCSCCCHHHHHHHHHHHHHHH
T ss_pred hhhhhhhHHHHHHcCCCCcceEEEECC-CCCEEeeccCCCCCHHHHHHHHHHHHHHh
Confidence 111267899999999999997 6999988889998 999999999998764
No 4
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.60 E-value=1.3e-14 Score=117.48 Aligned_cols=111 Identities=20% Similarity=0.285 Sum_probs=102.2
Q ss_pred ccccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEE
Q 020843 165 FNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVL 244 (320)
Q Consensus 165 ~~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~ 244 (320)
...+|++++..|+.++|++||+|+++||..|+.+...++.++.+.++++.+|+++.++.+..+...+++.|++..+|+++
T Consensus 12 ~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~ 91 (130)
T 2kuc_A 12 RELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHAYPTLL 91 (130)
T ss_dssp BCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTCCSSCEEE
T ss_pred ccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCCCCCCEEE
Confidence 35799999999999999999999999999999999999999999999999999999999887778899999999999999
Q ss_pred EEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 245 VVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 245 Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
|+|+ .|+.+.++.|..++++|.+.|.+.+..
T Consensus 92 ~~d~-~G~~~~~~~G~~~~~~l~~~l~~~~~~ 122 (130)
T 2kuc_A 92 FINS-SGEVVYRLVGAEDAPELLKKVKLGVES 122 (130)
T ss_dssp EECT-TSCEEEEEESCCCHHHHHHHHHHHHSC
T ss_pred EECC-CCcEEEEecCCCCHHHHHHHHHHHHHh
Confidence 9997 699999999999999999988888753
No 5
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.57 E-value=3e-14 Score=120.33 Aligned_cols=108 Identities=10% Similarity=0.148 Sum_probs=99.1
Q ss_pred ccHHHHHHHHHhcCCeEEEEEe-CCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCC---------hHHHHHHHHcC
Q 020843 167 GSFEKAKDAASVQDKWLLVNLQ-STKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDT---------SEGKKVCTYYK 236 (320)
Q Consensus 167 gsf~~A~~~Ak~~~K~LLV~l~-~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s---------~eg~~~~~~Y~ 236 (320)
.++.+++..++.++|++||+|+ ++||.+|+.+...++.++.+.++.+.+|+++.+|.+. .....+++.|+
T Consensus 34 ~~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~ 113 (154)
T 2ju5_A 34 ESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYK 113 (154)
T ss_dssp ECHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcC
Confidence 7799999999999999999999 9999999999999999999999998899999999876 34678999999
Q ss_pred CCCCcEEEEEecCCCceEEEEecCC--ChHHHHHHHHHHHhc
Q 020843 237 LDSIPVVLVVDPITGQKMRSWCGMV--QPESLLEDLVPFMDG 276 (320)
Q Consensus 237 v~~~P~i~Iidp~tG~~v~~~~G~~--~~~~fl~~L~~fld~ 276 (320)
+..+|+++|||+ .|+.+.++ |+. ++++|++.|...+..
T Consensus 114 v~~~Pt~~~~d~-~G~~~~~~-G~~~~~~~~l~~~l~~~l~~ 153 (154)
T 2ju5_A 114 VTGFPELVFIDA-EGKQLARM-GFEPGGGAAYVSKVKSALKL 153 (154)
T ss_dssp CCSSSEEEEECT-TCCEEEEE-CCCTTCHHHHHHHHHHHHTC
T ss_pred CCCCCEEEEEcC-CCCEEEEe-cCCCCCHHHHHHHHHHHHhc
Confidence 999999999997 69999999 998 899999999988753
No 6
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.56 E-value=4.8e-15 Score=126.57 Aligned_cols=109 Identities=17% Similarity=0.143 Sum_probs=93.6
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEE
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLV 245 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~I 245 (320)
..+|++|++.|++++|+|||+|+++||.+|+.|...++.++.|.++++.+||.+.+|.+..+ ....|++.++|+++|
T Consensus 30 ~~~~~~al~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e~~~---~~~~~~v~~~PT~~f 106 (151)
T 3ph9_A 30 VQTYEEGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETTD---KNLSPDGQYVPRIMF 106 (151)
T ss_dssp CSSHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSCCSC---GGGCTTCCCSSEEEE
T ss_pred hhCHHHHHHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCCchh---hHhhcCCCCCCEEEE
Confidence 46999999999999999999999999999999999999999999999989999999854333 356788999999999
Q ss_pred EecCCCceEEEEecC----------CChHHHHHHHHHHHhcCC
Q 020843 246 VDPITGQKMRSWCGM----------VQPESLLEDLVPFMDGGP 278 (320)
Q Consensus 246 idp~tG~~v~~~~G~----------~~~~~fl~~L~~fld~~~ 278 (320)
+++ .|+.+.++.|+ .+.+.+|+.+...+.+..
T Consensus 107 ~~~-~G~~v~~~~G~~~~~~~~~~~~~~~~ll~~~~~al~~~~ 148 (151)
T 3ph9_A 107 VDP-SLTVRADIAGRYSNRLYTYEPRDLPLLIENMKKALRLIQ 148 (151)
T ss_dssp ECT-TSCBCTTCCCSCTTSTTCCCGGGHHHHHHHHHHHHSCCC
T ss_pred ECC-CCCEEEEEeCCcCCcccccchhhHHHHHHHHHHHHHHHh
Confidence 998 59999888897 345677888887777643
No 7
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.32 E-value=3.5e-16 Score=127.15 Aligned_cols=111 Identities=19% Similarity=0.266 Sum_probs=102.4
Q ss_pred HHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecC
Q 020843 170 EKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPI 249 (320)
Q Consensus 170 ~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~ 249 (320)
+++++.|+.++|++||+|+++||..|+.+...++.++.+.+.++.+|+++.++.+..+...+++.|++..+|+++|+||.
T Consensus 9 ~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~ 88 (130)
T 2lst_A 9 PEALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPK 88 (130)
Confidence 88999999999999999999999999999999999999999999999999999988888899999999999999999987
Q ss_pred CCce--EEEEecCCChHHHHHHHHHHHhcCCCc
Q 020843 250 TGQK--MRSWCGMVQPESLLEDLVPFMDGGPRE 280 (320)
Q Consensus 250 tG~~--v~~~~G~~~~~~fl~~L~~fld~~~~d 280 (320)
.|+. +.++.|..++++|.+.|.+.+.+....
T Consensus 89 ~G~~~~~~~~~G~~~~~~l~~~l~~~~~~~~~~ 121 (130)
T 2lst_A 89 AGAWEEVGRLFGSRPRAEFLKELRQVCVKGGAC 121 (130)
Confidence 8988 888899999999999998888765443
No 8
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.50 E-value=5.3e-14 Score=122.83 Aligned_cols=106 Identities=14% Similarity=0.199 Sum_probs=85.7
Q ss_pred cHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHc--------CCCC
Q 020843 168 SFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYY--------KLDS 239 (320)
Q Consensus 168 sf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y--------~v~~ 239 (320)
.+++|++.|++++|+|||+|+.+||.+|++|.+.+|.+++|.++++++||++.+|.+... .+.+.| ++.+
T Consensus 27 ~~~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~~--~l~~~y~~~~q~~~gv~g 104 (173)
T 3ira_A 27 WGEEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREERP--DIDNIYMTVCQIILGRGG 104 (173)
T ss_dssp SSHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTCH--HHHHHHHHHHHHHHSCCC
T ss_pred cCHHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCcccC--cHHHHHHHHHHHHcCCCC
Confidence 458999999999999999999999999999999999999999999999999999987532 233444 8999
Q ss_pred CcEEEEEecCCCceEEEEecCC------ChHHHHHHHHHHHhcC
Q 020843 240 IPVVLVVDPITGQKMRSWCGMV------QPESLLEDLVPFMDGG 277 (320)
Q Consensus 240 ~P~i~Iidp~tG~~v~~~~G~~------~~~~fl~~L~~fld~~ 277 (320)
+|+++|++| .|+.+... ++. +...|++.|..+.+.+
T Consensus 105 ~Pt~v~l~~-dG~~v~~~-ty~p~~~~~~~~~f~~~L~~v~~~~ 146 (173)
T 3ira_A 105 WPLNIIMTP-GKKPFFAG-TYIPKNTRFNQIGMLELVPRIKEIW 146 (173)
T ss_dssp SSEEEEECT-TSCEEEEE-SSCCSSCBTTBCCHHHHHHHHHHHH
T ss_pred CcceeeECC-CCCceeee-eeCCCCcCCCCCCHHHHHHHHHHHH
Confidence 999999998 58887652 332 3345666666655443
No 9
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.45 E-value=4e-13 Score=110.38 Aligned_cols=113 Identities=14% Similarity=0.216 Sum_probs=93.5
Q ss_pred CCCcccc-ccccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCC--hHHHHHHHH
Q 020843 158 RPPFHLM-FNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDT--SEGKKVCTY 234 (320)
Q Consensus 158 ~Ppf~~~-~~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s--~eg~~~~~~ 234 (320)
.|+|..+ ...+|+..+..+ ++|++||+|+++||..|+.+...+|.++.+.+.++ +++++.++.+. .+...+++.
T Consensus 10 ~~~f~~~~~~~~~~~~l~~~--~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~-~~~~~~vd~~~~~~~~~~l~~~ 86 (134)
T 2fwh_A 10 HLNFTQIKTVDELNQALVEA--KGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA-DTVLLQANVTANDAQDVALLKH 86 (134)
T ss_dssp CCCCEECCSHHHHHHHHHHH--TTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT-TSEEEEEECTTCCHHHHHHHHH
T ss_pred CCCcEEecCHHHHHHHHHHh--cCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc-CcEEEEEeCCCCcchHHHHHHH
Confidence 4677632 234666666654 38999999999999999999999999999999887 49999999876 567889999
Q ss_pred cCCCCCcEEEEEecCCCceE--EEEecCCChHHHHHHHHHHH
Q 020843 235 YKLDSIPVVLVVDPITGQKM--RSWCGMVQPESLLEDLVPFM 274 (320)
Q Consensus 235 Y~v~~~P~i~Iidp~tG~~v--~~~~G~~~~~~fl~~L~~fl 274 (320)
|++..+|+++|+|+ .|+.+ .++.|..++++|.+.|..+-
T Consensus 87 ~~v~~~Pt~~~~d~-~G~~v~~~~~~G~~~~~~l~~~l~~~~ 127 (134)
T 2fwh_A 87 LNVLGLPTILFFDG-QGQEHPQARVTGFMDAETFSAHLRDRQ 127 (134)
T ss_dssp TTCCSSSEEEEECT-TSCBCGGGCBCSCCCHHHHHHHHHHC-
T ss_pred cCCCCCCEEEEECC-CCCEeeeeeeeeccCHHHHHHHHHhcC
Confidence 99999999999997 58887 67899999998888776543
No 10
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.45 E-value=4.2e-13 Score=109.32 Aligned_cols=105 Identities=17% Similarity=0.204 Sum_probs=91.0
Q ss_pred ccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCC-hHHHHHHHHcCC---CCCcE
Q 020843 167 GSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDT-SEGKKVCTYYKL---DSIPV 242 (320)
Q Consensus 167 gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s-~eg~~~~~~Y~v---~~~P~ 242 (320)
.+|+++++.|+.++|++||+|+++||..|+.+.. +|.++.+.+.++.+++++.++.++ .+...+++.|++ ..+|+
T Consensus 16 ~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~-~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt 94 (133)
T 3fk8_A 16 TQVKKALAAGKRTHKPTLLVFGANWCTDCRALDK-SLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPA 94 (133)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHH-HHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSE
T ss_pred hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH-HhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCccce
Confidence 4789999999999999999999999999999987 688889999998899999999843 345679999999 99999
Q ss_pred EEEEecCCCceEEEEec-------CCChHHHHHHHHHH
Q 020843 243 VLVVDPITGQKMRSWCG-------MVQPESLLEDLVPF 273 (320)
Q Consensus 243 i~Iidp~tG~~v~~~~G-------~~~~~~fl~~L~~f 273 (320)
++|+|+ .|+.+.+..| ..+.+++.+.|...
T Consensus 95 ~~~~d~-~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 95 VVVVNS-DGKVRYTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp EEEECT-TSCEEEECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred EEEECC-CCCEEEEecCCcccccccCCHHHHHHHHHHh
Confidence 999997 6999988888 66777776666554
No 11
>1v92_A NSFL1 cofactor P47; 3-helix bundle, recombination; NMR {Rattus norvegicus} SCOP: a.5.2.3
Probab=99.29 E-value=2.5e-12 Score=88.09 Aligned_cols=42 Identities=26% Similarity=0.605 Sum_probs=39.6
Q ss_pred chHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCC
Q 020843 9 DKQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGN 51 (320)
Q Consensus 9 ~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~ 51 (320)
+++++|.+|++| ||+++++|++||++++|||+.||+.||+.+
T Consensus 4 ~~~~~i~~F~~i-Tg~~~~~A~~~L~~~~wdle~Ai~~ff~~~ 45 (46)
T 1v92_A 4 ERQDALREFVAV-TGAEEDRARFFLESAGWDLQIALASFYEDG 45 (46)
T ss_dssp HHHHHHHHHHHH-TCCCHHHHHHHHHHTTSCSHHHHHHHHHTC
T ss_pred cHHHHHHHHHHH-hCcCHHHHHHHHHHcCCCHHHHHHHHHcCC
Confidence 378999999999 899999999999999999999999999865
No 12
>2dal_A Protein KIAA0794; FAS associted factor 1, UBA-like domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.28 E-value=3.8e-12 Score=92.93 Aligned_cols=45 Identities=22% Similarity=0.425 Sum_probs=41.4
Q ss_pred cchHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCCCC
Q 020843 8 NDKQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNES 53 (320)
Q Consensus 8 ~~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~~~ 53 (320)
..++++|.+|++| ||+++++|++||++++||||.||++||+.++.
T Consensus 13 ~~~~e~i~qF~~i-Tg~~~~~A~~~Le~~~WnLe~Av~~ff~~~~~ 57 (62)
T 2dal_A 13 SALKGLIQQFTTI-TGASESVGKHMLEACNNNLEMAVTMFLDGGGS 57 (62)
T ss_dssp HHHHHHHHHHHHH-TCCCHHHHHHHHHTTTSCHHHHHHHHHHSCCC
T ss_pred ccHHHHHHHHHHH-hCCCHHHHHHHHHHcCCCHHHHHHHHHcCCCC
Confidence 3478999999999 89999999999999999999999999997653
No 13
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.22 E-value=7.5e-11 Score=94.96 Aligned_cols=98 Identities=10% Similarity=0.137 Sum_probs=81.6
Q ss_pred HHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCCceEE
Q 020843 176 ASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMR 255 (320)
Q Consensus 176 Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~ 255 (320)
+..++|++||+|+++||..|+.+...+ +.+.+.++.++.++.++.+..+...+++.|++..+|+++|+++ .|+.+.
T Consensus 22 ~~~~~k~~lv~f~a~wC~~C~~~~~~l---~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~-~G~~~~ 97 (126)
T 2l57_A 22 EAKEGIPTIIMFKTDTCPYCVEMQKEL---SYVSKEREGKFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDK-EGNKFY 97 (126)
T ss_dssp TCCSSSCEEEEEECSSCHHHHHHHHHH---HHHHHHSSSSCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECT-TCCEEE
T ss_pred HHhCCCcEEEEEECCCCccHHHHHHHH---HHHHHHhcCCeEEEEEeCCCCchHHHHHHcCCcceeEEEEECC-CCCEEE
Confidence 456799999999999999999997654 4555556567999999955555677999999999999999997 699998
Q ss_pred EEecCCChHHHHHHHHHHHhcC
Q 020843 256 SWCGMVQPESLLEDLVPFMDGG 277 (320)
Q Consensus 256 ~~~G~~~~~~fl~~L~~fld~~ 277 (320)
++.|..+.++|.+.|.+.+...
T Consensus 98 ~~~G~~~~~~l~~~l~~~~~~~ 119 (126)
T 2l57_A 98 VHQGLMRKNNIETILNSLGVKE 119 (126)
T ss_dssp EEESCCCHHHHHHHHHHHCCCC
T ss_pred EecCCCCHHHHHHHHHHHhccc
Confidence 9999999999888888776543
No 14
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.22 E-value=9.4e-12 Score=101.83 Aligned_cols=97 Identities=4% Similarity=-0.043 Sum_probs=82.2
Q ss_pred cCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCCceEEEEe
Q 020843 179 QDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSWC 258 (320)
Q Consensus 179 ~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~ 258 (320)
..+++||+|+++||.+|+.|++.|+....+.+..+ .+.+.++|++......++..|++...|++++++ .|+.+.++.
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~-~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~--~G~ev~Ri~ 93 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGR-AAPVQRLQMRDPLPPGLELARPVTFTPTFVLMA--GDVESGRLE 93 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHH-HSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEE--TTEEEEEEE
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcc-cceEEEEECCCCCchhHHHHCCCCCCCEEEEEE--CCEEEeeec
Confidence 34789999999999999999999998887766655 467778888776555577789999999999999 599999999
Q ss_pred cCCChHHHHHHHHHHHhcCC
Q 020843 259 GMVQPESLLEDLVPFMDGGP 278 (320)
Q Consensus 259 G~~~~~~fl~~L~~fld~~~ 278 (320)
|+++++.|+..|...+.+.+
T Consensus 94 G~~~~~~f~~~L~~~l~~~~ 113 (116)
T 3dml_A 94 GYPGEDFFWPMLARLIGQAE 113 (116)
T ss_dssp CCCCHHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHhhcC
Confidence 99999999999999987643
No 15
>3e21_A HFAF1, FAS-associated factor 1; UBA, alternative splicing, apoptosis, nucleus, phosphoprotein; 1.73A {Homo sapiens}
Probab=99.22 E-value=3.3e-12 Score=87.11 Aligned_cols=40 Identities=23% Similarity=0.458 Sum_probs=35.1
Q ss_pred chHHHHHhhhccccCCC-HHHHHHHHHHcCCCHHHHHHHHhc
Q 020843 9 DKQSMVSSFLEIAVGQT-AETAVQFLQATSWKLDEAIQLFYV 49 (320)
Q Consensus 9 ~~~~~i~~F~~iTt~~~-~~~A~~~Le~~~wdLe~Av~~ff~ 49 (320)
+++++|++|++| ||.+ .++|++||+++||||+.||+.||.
T Consensus 4 d~de~ia~F~~i-TG~~d~~~A~~~Lea~nWDLe~Av~~f~~ 44 (45)
T 3e21_A 4 DREMILADFQAC-TGIENIDEAITLLEQNNWDLVAAINGVIP 44 (45)
T ss_dssp CHHHHHHHHHHH-HCCCCHHHHHHHHHHTTTCHHHHHTTC--
T ss_pred cHHHHHHHHHHH-HCCCCHHHHHHHHHHcCCcHHHHHHHHcC
Confidence 589999999999 6655 599999999999999999999985
No 16
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.21 E-value=1.1e-10 Score=91.38 Aligned_cols=101 Identities=17% Similarity=0.189 Sum_probs=83.1
Q ss_pred ccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEE
Q 020843 167 GSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVV 246 (320)
Q Consensus 167 gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Ii 246 (320)
.+|++++..+++++|+++|+|+++||..|+.+...+ +.+.+.+..++.|+.++.+.. ..+++.|++..+|+++|+
T Consensus 11 ~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~~~vd~~~~--~~~~~~~~v~~~Pt~~~~ 85 (112)
T 1ep7_A 11 AAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLF---ETLSNDYAGKVIFLKVDVDAV--AAVAEAAGITAMPTFHVY 85 (112)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTSEEEEEETTTT--HHHHHHHTCCBSSEEEEE
T ss_pred HHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHH---HHHHHHcCCCeEEEEEECCch--HHHHHHcCCCcccEEEEE
Confidence 578999998888899999999999999999997653 345555555799999998753 468889999999998777
Q ss_pred ecCCCceEEEEecCCChHHHHHHHHHHHh
Q 020843 247 DPITGQKMRSWCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 247 dp~tG~~v~~~~G~~~~~~fl~~L~~fld 275 (320)
+ .|+.+.++.|. +++++.+.|.+.+.
T Consensus 86 -~-~G~~~~~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 86 -K-DGVKADDLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp -E-TTEEEEEEESC-CHHHHHHHHHHHHC
T ss_pred -E-CCeEEEEEcCC-CHHHHHHHHHHHhc
Confidence 3 69999899998 89888888877663
No 17
>2dam_A ETEA protein; KIAA0887, UBA-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.19 E-value=1.9e-11 Score=90.52 Aligned_cols=45 Identities=16% Similarity=0.396 Sum_probs=40.9
Q ss_pred CcchHHHHHhhhccccC-CCHHHHHHHHHHcCCCHHHHHHHHhcCCC
Q 020843 7 ANDKQSMVSSFLEIAVG-QTAETAVQFLQATSWKLDEAIQLFYVGNE 52 (320)
Q Consensus 7 ~~~~~~~i~~F~~iTt~-~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 52 (320)
+.+++++|.+|++| || +++++|++||++++||||.||+.||+...
T Consensus 15 s~~~~e~i~qF~~I-Tg~~d~~~A~~~Le~~~WnLe~Av~~ff~~~~ 60 (67)
T 2dam_A 15 TQEQTEKLLQFQDL-TGIESMDQCRHTLEQHNWNIEAAVQDRLNEQE 60 (67)
T ss_dssp CHHHHHHHHHHHHH-HCCSCHHHHHHHHHHHTSCHHHHHHHHHHSSC
T ss_pred ChhHHHHHHHHHHH-hCCCCHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 34588999999999 66 99999999999999999999999999754
No 18
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.16 E-value=2.5e-10 Score=90.31 Aligned_cols=100 Identities=19% Similarity=0.234 Sum_probs=81.9
Q ss_pred ccccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEE
Q 020843 165 FNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVL 244 (320)
Q Consensus 165 ~~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~ 244 (320)
...+|++++ .+|+++|+|+++||..|+.+...+ +.+.+.++.++.++.+|.+.. ..+++.|++..+|+++
T Consensus 7 ~~~~~~~~~-----~~~~~lv~f~a~wC~~C~~~~~~l---~~~~~~~~~~v~~~~vd~~~~--~~l~~~~~v~~~Pt~~ 76 (112)
T 2voc_A 7 TDQSFSAET-----SEGVVLADFWAPWCGPSKMIAPVL---EELDQEMGDKLKIVKIDVDEN--QETAGKYGVMSIPTLL 76 (112)
T ss_dssp CTTTHHHHH-----SSSEEEEEEECTTBGGGGGHHHHH---HHHHHHHTTTCEEEEEETTTC--CSHHHHTTCCSBSEEE
T ss_pred cHHHHHHHh-----CCCEEEEEEECCCCHHHHHHHHHH---HHHHHHhCCCcEEEEEECCCC--HHHHHHcCCCcccEEE
Confidence 345788777 789999999999999999997665 556666666899999998754 3478899999999999
Q ss_pred EEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 245 VVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 245 Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
|+ + .|+.+.++.|..+.++|.+.|...+..
T Consensus 77 ~~-~-~G~~~~~~~G~~~~~~l~~~l~~~~~~ 106 (112)
T 2voc_A 77 VL-K-DGEVVETSVGFKPKEALQELVNKHLLE 106 (112)
T ss_dssp EE-E-TTEEEEEEESCCCHHHHHHHHHTTSCS
T ss_pred EE-e-CCEEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 99 4 699999999999998887777665554
No 19
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.15 E-value=3.1e-10 Score=90.46 Aligned_cols=108 Identities=12% Similarity=0.216 Sum_probs=84.7
Q ss_pred CCccccccccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCC
Q 020843 159 PPFHLMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLD 238 (320)
Q Consensus 159 Ppf~~~~~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~ 238 (320)
+.+.+....+|++++..|+..+|+++|+|+++||..|+.+... | +.+.+.+. ++.|+.+|.+.. ..+++.|++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~-l--~~~~~~~~-~~~~~~vd~~~~--~~~~~~~~v~ 86 (122)
T 2vlu_A 13 EVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPV-F--ADLAKKFP-NAVFLKVDVDEL--KPIAEQFSVE 86 (122)
T ss_dssp CCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHH-H--HHHHHHCT-TSEEEEEETTTC--HHHHHHTTCC
T ss_pred cceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHH-H--HHHHHHCC-CcEEEEEECCCC--HHHHHHcCCC
Confidence 3344445568999999999999999999999999999999642 2 22333333 388889888753 4588899999
Q ss_pred CCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHh
Q 020843 239 SIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 239 ~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld 275 (320)
.+|+++|+ + .|+.+.++.|.. ++++.+.|.+.+.
T Consensus 87 ~~Pt~~~~-~-~G~~~~~~~G~~-~~~l~~~l~~~l~ 120 (122)
T 2vlu_A 87 AMPTFLFM-K-EGDVKDRVVGAI-KEELTAKVGLHAA 120 (122)
T ss_dssp SSSEEEEE-E-TTEEEEEEESSC-HHHHHHHHHHHHS
T ss_pred cccEEEEE-e-CCEEEEEEeCcC-HHHHHHHHHHHhc
Confidence 99998877 3 699998999988 8888888887764
No 20
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.14 E-value=3.4e-10 Score=91.79 Aligned_cols=98 Identities=12% Similarity=0.261 Sum_probs=80.5
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc--ceEEEEeecCChHHHHHHHHcCCCCCcEE
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST--NFIFWQVYDDTSEGKKVCTYYKLDSIPVV 243 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~--nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i 243 (320)
..+|++++..|+.++|+++|+|+++||..|+.+... +.++.++ ++.|+.+|.+.. ..+++.|++..+|++
T Consensus 24 ~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~------l~~l~~~~~~v~~~~vd~d~~--~~l~~~~~v~~~Pt~ 95 (124)
T 1xfl_A 24 VETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPF------FADLAKKLPNVLFLKVDTDEL--KSVASDWAIQAMPTF 95 (124)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHH------HHHHHHHCSSEEEEEEETTTS--HHHHHHTTCCSSSEE
T ss_pred HHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHH------HHHHHHHCCCcEEEEEECccC--HHHHHHcCCCccCEE
Confidence 468999999999999999999999999999999643 4444443 689999988753 468899999999998
Q ss_pred EEEecCCCceEEEEecCCChHHHHHHHHHHH
Q 020843 244 LVVDPITGQKMRSWCGMVQPESLLEDLVPFM 274 (320)
Q Consensus 244 ~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fl 274 (320)
+|+ + .|+.+.++.| .+++++.+.|.+.+
T Consensus 96 ~~~-~-~G~~~~~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 96 MFL-K-EGKILDKVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp EEE-E-TTEEEEEEES-CCHHHHHHHHHHHC
T ss_pred EEE-E-CCEEEEEEeC-CCHHHHHHHHHHhc
Confidence 887 3 6999989999 48888888777654
No 21
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.14 E-value=3.2e-10 Score=89.39 Aligned_cols=100 Identities=17% Similarity=0.324 Sum_probs=82.8
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc--ceEEEEeecCChHHHHHHHHcCCCCCcEE
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST--NFIFWQVYDDTSEGKKVCTYYKLDSIPVV 243 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~--nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i 243 (320)
..+|++++..|+..+|+++|+|+++||..|+.+.. .+.++.++ ++.|+.++.+.. ..+++.|++..+|++
T Consensus 14 ~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~------~l~~~~~~~~~~~~~~v~~~~~--~~~~~~~~v~~~Pt~ 85 (118)
T 2vm1_A 14 KQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAP------VFAEYAKKFPGAIFLKVDVDEL--KDVAEAYNVEAMPTF 85 (118)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHH------HHHHHHHHCTTSEEEEEETTTS--HHHHHHTTCCSBSEE
T ss_pred HHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhH------HHHHHHHHCCCcEEEEEEcccC--HHHHHHcCCCcCcEE
Confidence 46899999999999999999999999999999964 44555443 688888888753 468889999999999
Q ss_pred EEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 244 LVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 244 ~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
+|+. .|+.+.++.| .+++++.+.|.+.+..
T Consensus 86 ~~~~--~g~~~~~~~g-~~~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 86 LFIK--DGEKVDSVVG-GRKDDIHTKIVALMGS 115 (118)
T ss_dssp EEEE--TTEEEEEEES-CCHHHHHHHHHHHHC-
T ss_pred EEEe--CCeEEEEecC-CCHHHHHHHHHHHhcc
Confidence 8883 6999988899 5888999888888754
No 22
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.14 E-value=2.8e-10 Score=90.57 Aligned_cols=94 Identities=23% Similarity=0.381 Sum_probs=71.8
Q ss_pred ccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEE
Q 020843 167 GSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVV 246 (320)
Q Consensus 167 gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Ii 246 (320)
.+|++++..+ .+|+++|+|+++||.+|+.|...+ +.+.+.. .+++|+.+|++.. ..+++.|++.++||++++
T Consensus 9 ~~f~~~l~~~--~~k~vvv~F~a~wC~~C~~~~p~~---~~~~~~~-~~~~~~~vd~d~~--~~l~~~~~V~~~PT~~~~ 80 (105)
T 3zzx_A 9 EDFTKQLNEA--GNKLVVIDFYATWCGPCKMIAPKL---EELSQSM-SDVVFLKVDVDEC--EDIAQDNQIACMPTFLFM 80 (105)
T ss_dssp HHHHHHHHHT--TTSEEEEEEECTTCHHHHHHHHHH---HHHHHHC-TTEEEEEEETTTC--HHHHHHTTCCBSSEEEEE
T ss_pred HHHHHHHHhc--CCCEEEEEEECCCCCCccCCCcch---hhhhhcc-CCeEEEEEecccC--HHHHHHcCCCeecEEEEE
Confidence 4677777654 589999999999999999996433 2333333 3688999988753 468999999999999988
Q ss_pred ecCCCceEEEEecCCChHHHHHHHH
Q 020843 247 DPITGQKMRSWCGMVQPESLLEDLV 271 (320)
Q Consensus 247 dp~tG~~v~~~~G~~~~~~fl~~L~ 271 (320)
. .|+.+.++.|. +++++.+.|.
T Consensus 81 ~--~G~~v~~~~G~-~~~~l~~~i~ 102 (105)
T 3zzx_A 81 K--NGQKLDSLSGA-NYDKLLELVE 102 (105)
T ss_dssp E--TTEEEEEEESC-CHHHHHHHHH
T ss_pred E--CCEEEEEEeCc-CHHHHHHHHH
Confidence 4 69999999994 7776555544
No 23
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.14 E-value=2.6e-10 Score=91.11 Aligned_cols=98 Identities=26% Similarity=0.336 Sum_probs=77.8
Q ss_pred ccccccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc--ceEEEEeecCChHHHHHHHHcCCCCC
Q 020843 163 LMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST--NFIFWQVYDDTSEGKKVCTYYKLDSI 240 (320)
Q Consensus 163 ~~~~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~--nFV~~q~d~~s~eg~~~~~~Y~v~~~ 240 (320)
.....+|++++..+ ++|++||+|+++||..|+.+.. .+.++.++ ++.|+.+|.+.. ..+++.|++..+
T Consensus 16 ~~t~~~f~~~l~~~--~~k~vlv~F~a~wC~~C~~~~p------~l~~l~~~~~~v~~~~vd~d~~--~~l~~~~~v~~~ 85 (116)
T 3qfa_C 16 IESKTAFQEALDAA--GDKLVVVDFSATWCGPSKMIKP------FFHSLSEKYSNVIFLEVDVDDC--QDVASECEVKSM 85 (116)
T ss_dssp CCCHHHHHHHHHHH--TTSCEEEEEECTTCHHHHHHHH------HHHHHHTTCTTSEEEEEETTTT--HHHHHHTTCCSS
T ss_pred CCCHHHHHHHHHhc--CCCEEEEEEECCCCHHHHHHHH------HHHHHHHHCCCCEEEEEECCCC--HHHHHHcCCccc
Confidence 33345788877553 7999999999999999999964 44554442 388999988754 468899999999
Q ss_pred cEEEEEecCCCceEEEEecCCChHHHHHHHHHH
Q 020843 241 PVVLVVDPITGQKMRSWCGMVQPESLLEDLVPF 273 (320)
Q Consensus 241 P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~f 273 (320)
|+++|+ +.|+.+.++.|. +++++.+.|.+.
T Consensus 86 Pt~~~~--~~G~~~~~~~G~-~~~~l~~~l~~~ 115 (116)
T 3qfa_C 86 PTFQFF--KKGQKVGEFSGA-NKEKLEATINEL 115 (116)
T ss_dssp SEEEEE--SSSSEEEEEESC-CHHHHHHHHHHH
T ss_pred cEEEEE--eCCeEEEEEcCC-CHHHHHHHHHHh
Confidence 999998 369999999998 999888888765
No 24
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.13 E-value=5.1e-10 Score=86.67 Aligned_cols=99 Identities=19% Similarity=0.314 Sum_probs=79.9
Q ss_pred ccccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEE
Q 020843 165 FNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVL 244 (320)
Q Consensus 165 ~~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~ 244 (320)
...+|++++. ++|+++|+|+++||..|+.+...+ ..+.+.+..++.+..++.+.. ..+++.|++..+|+++
T Consensus 10 ~~~~~~~~~~----~~~~~lv~f~~~~C~~C~~~~~~~---~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~i~~~Pt~~ 80 (109)
T 3tco_A 10 TEENFDEVIR----NNKLVLVDCWAEWCAPCHLYEPIY---KKVAEKYKGKAVFGRLNVDEN--QKIADKYSVLNIPTTL 80 (109)
T ss_dssp CTTTHHHHHH----HSSEEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTSEEEEEETTTC--HHHHHHTTCCSSSEEE
T ss_pred cHHHHHHHHh----cCCeEEEEEECCCCHHHHhhhHHH---HHHHHHhCCCceEEEEccccC--HHHHHhcCcccCCEEE
Confidence 3457777764 489999999999999999997433 344455556788998888654 4588899999999999
Q ss_pred EEecCCCceEEEEecCCChHHHHHHHHHHH
Q 020843 245 VVDPITGQKMRSWCGMVQPESLLEDLVPFM 274 (320)
Q Consensus 245 Iidp~tG~~v~~~~G~~~~~~fl~~L~~fl 274 (320)
++ + .|+.+.++.|..+.+++.+.|.+.+
T Consensus 81 ~~-~-~g~~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 81 IF-V-NGQLVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp EE-E-TTEEEEEEESCCCHHHHHHHHHHHC
T ss_pred EE-c-CCcEEEeeeccCCHHHHHHHHHHHh
Confidence 99 3 6999999999999999998888765
No 25
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.12 E-value=8.4e-10 Score=86.02 Aligned_cols=92 Identities=15% Similarity=0.223 Sum_probs=77.7
Q ss_pred HhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCCceEEE
Q 020843 177 SVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRS 256 (320)
Q Consensus 177 k~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~~ 256 (320)
.+.+|+++|+|+++||..|+.+...+ +.+.+.+..++.|+.++.+.. ..+++.|++..+|+++++. .|+.+.+
T Consensus 19 ~~~~~~vlv~f~a~~C~~C~~~~~~~---~~~~~~~~~~v~~~~vd~~~~--~~l~~~~~v~~~Pt~~~~~--~g~~~~~ 91 (111)
T 3gnj_A 19 YDEGKACLVMFSRKNCHVCQKVTPVL---EELRLNYEESFGFYYVDVEEE--KTLFQRFSLKGVPQILYFK--DGEYKGK 91 (111)
T ss_dssp TTSCCCEEEEEECSSCHHHHHHHHHH---HHHHHHTTTTSEEEEEETTTC--HHHHHHTTCCSSCEEEEEE--TTEEEEE
T ss_pred HhcCCEEEEEEeCCCChhHHHHHHHH---HHHHHHcCCceEEEEEECCcC--hhHHHhcCCCcCCEEEEEE--CCEEEEE
Confidence 36789999999999999999997654 555566666799999998764 4688999999999999994 6999989
Q ss_pred EecCCChHHHHHHHHHHHh
Q 020843 257 WCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 257 ~~G~~~~~~fl~~L~~fld 275 (320)
+.|..+.+++.+.|.+.+.
T Consensus 92 ~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 92 MAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp EESSCCHHHHHHHHHHHHH
T ss_pred EeccCCHHHHHHHHHHHhc
Confidence 9999999999999988775
No 26
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.12 E-value=4.5e-10 Score=91.87 Aligned_cols=101 Identities=14% Similarity=0.222 Sum_probs=84.2
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh--cceEEEEeecCChHHHHHHHHcCCCCCcEE
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS--TNFIFWQVYDDTSEGKKVCTYYKLDSIPVV 243 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~--~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i 243 (320)
..+|++++..+..++|+++|+|+++||..|+.+... +.++.+ .++.|+.++.+.. ..+++.|++..+|++
T Consensus 32 ~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~------l~~l~~~~~~v~~~~v~~~~~--~~~~~~~~v~~~Pt~ 103 (139)
T 3d22_A 32 KERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPY------YIELSENYPSLMFLVIDVDEL--SDFSASWEIKATPTF 103 (139)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHH------HHHHHHHCTTSEEEEEETTTS--HHHHHHTTCCEESEE
T ss_pred HHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHH------HHHHHHHCCCCEEEEEeCccc--HHHHHHcCCCcccEE
Confidence 468999999999999999999999999999999753 344433 3688999988753 468899999999999
Q ss_pred EEEecCCCceEEEEecCCChHHHHHHHHHHHhcC
Q 020843 244 LVVDPITGQKMRSWCGMVQPESLLEDLVPFMDGG 277 (320)
Q Consensus 244 ~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~~ 277 (320)
+|+ + .|+.+.++.|. +++++.+.|...+...
T Consensus 104 ~~~-~-~G~~~~~~~G~-~~~~l~~~l~~~~~~~ 134 (139)
T 3d22_A 104 FFL-R-DGQQVDKLVGA-NKPELHKKITAILDSL 134 (139)
T ss_dssp EEE-E-TTEEEEEEESC-CHHHHHHHHHHHHHTS
T ss_pred EEE-c-CCeEEEEEeCC-CHHHHHHHHHHHhccC
Confidence 888 3 69999999998 8899988888888753
No 27
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.11 E-value=6.8e-10 Score=88.82 Aligned_cols=98 Identities=14% Similarity=0.229 Sum_probs=77.9
Q ss_pred HHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecC
Q 020843 170 EKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPI 249 (320)
Q Consensus 170 ~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~ 249 (320)
++..+...+.+|++||+|+++||..|+.+...+ ..+.+.+..++.++.++.+.. ..+++.|++..+|+++|+ +
T Consensus 21 ~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l---~~~~~~~~~~v~~~~vd~d~~--~~l~~~~~v~~~Pt~~~~-~- 93 (119)
T 1w4v_A 21 PDFQDRVVNSETPVVVDFHAQWCGPCKILGPRL---EKMVAKQHGKVVMAKVDIDDH--TDLAIEYEVSAVPTVLAM-K- 93 (119)
T ss_dssp HHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHTTTSSEEEEEETTTT--HHHHHHTTCCSSSEEEEE-E-
T ss_pred hhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHH---HHHHHHhcCCeEEEEEeCCCC--HHHHHHcCCCcccEEEEE-e-
Confidence 333344456789999999999999999997543 344444556799999998754 368889999999999999 3
Q ss_pred CCceEEEEecCCChHHHHHHHHHHH
Q 020843 250 TGQKMRSWCGMVQPESLLEDLVPFM 274 (320)
Q Consensus 250 tG~~v~~~~G~~~~~~fl~~L~~fl 274 (320)
.|+.+.++.|..+++.+.+.|.+.+
T Consensus 94 ~G~~~~~~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 94 NGDVVDKFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp TTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCCCHHHHHHHHHHHh
Confidence 6999989999999999888887765
No 28
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.11 E-value=6.9e-10 Score=92.00 Aligned_cols=102 Identities=12% Similarity=0.139 Sum_probs=84.4
Q ss_pred ccccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEE
Q 020843 165 FNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVL 244 (320)
Q Consensus 165 ~~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~ 244 (320)
...+|++++ ..+|++||+|+++||..|+.+...+ +.+.+.+..++.|+.+|.+... .+++.|++..+|+++
T Consensus 44 ~~~~~~~~~----~~~k~vlv~F~a~wC~~C~~~~p~l---~~~~~~~~~~~~~~~vd~~~~~--~l~~~~~v~~~Pt~~ 114 (148)
T 3p2a_A 44 TAETLDKLL----QDDLPMVIDFWAPWCGPCRSFAPIF---AETAAERAGKVRFVKVNTEAEP--ALSTRFRIRSIPTIM 114 (148)
T ss_dssp CTTTHHHHT----TCSSCEEEEEECSSCHHHHHHHHHH---HHHHHHTTTTCEEEEEETTTCH--HHHHHTTCCSSSEEE
T ss_pred CHHHHHHHH----hcCCcEEEEEECCCCHHHHHHHHHH---HHHHHHcCCceEEEEEECcCCH--HHHHHCCCCccCEEE
Confidence 345777666 7899999999999999999996543 4555555567899999887543 588899999999999
Q ss_pred EEecCCCceEEEEecCCChHHHHHHHHHHHhcC
Q 020843 245 VVDPITGQKMRSWCGMVQPESLLEDLVPFMDGG 277 (320)
Q Consensus 245 Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~~ 277 (320)
|+. .|+.+.++.|..+.++|.+.|.+.+.+.
T Consensus 115 ~~~--~G~~~~~~~G~~~~~~l~~~l~~~l~~~ 145 (148)
T 3p2a_A 115 LYR--NGKMIDMLNGAVPKAPFDNWLDEQLSRD 145 (148)
T ss_dssp EEE--TTEEEEEESSCCCHHHHHHHHHHHHHSC
T ss_pred EEE--CCeEEEEEeCCCCHHHHHHHHHHHhccc
Confidence 995 6999999999999999999999998764
No 29
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.10 E-value=3.7e-10 Score=91.07 Aligned_cols=104 Identities=13% Similarity=0.208 Sum_probs=83.5
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEE
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLV 245 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~I 245 (320)
..+|++.+ .+.+|++||+|+++||..|+.+...+ +.+.+.++.++.|+.+|.+.. ..+++.|++..+|+++|
T Consensus 24 ~~~f~~~~---~~~~~~~lv~f~a~wC~~C~~~~~~~---~~~~~~~~~~~~~~~vd~~~~--~~l~~~~~v~~~Pt~~~ 95 (130)
T 2dml_A 24 PSNFNREV---IQSDGLWLVEFYAPWCGHCQRLTPEW---KKAATALKDVVKVGAVNADKH--QSLGGQYGVQGFPTIKI 95 (130)
T ss_dssp TTTHHHHT---TTCSSCEEEEEECTTCSTTGGGHHHH---HHHHHHTTTTSEEEEEETTTC--HHHHHHHTCCSSSEEEE
T ss_pred HHHHHHHH---hcCCCeEEEEEECCCCHHHHhhCHHH---HHHHHHhcCceEEEEEeCCCC--HHHHHHcCCCccCEEEE
Confidence 34666544 36689999999999999999997665 556666666788999988754 45888999999999999
Q ss_pred EecCCCceEEEEecCCChHHHHHHHHHHHhcCC
Q 020843 246 VDPITGQKMRSWCGMVQPESLLEDLVPFMDGGP 278 (320)
Q Consensus 246 idp~tG~~v~~~~G~~~~~~fl~~L~~fld~~~ 278 (320)
+++ .|+.+.++.|..+.+++++.|.+.+...+
T Consensus 96 ~~~-~~~~~~~~~G~~~~~~l~~~l~~~l~~~~ 127 (130)
T 2dml_A 96 FGA-NKNKPEDYQGGRTGEAIVDAALSALRSGP 127 (130)
T ss_dssp ESS-CTTSCEECCSCCSHHHHHHHHHHHHHHSS
T ss_pred EeC-CCCeEEEeecCCCHHHHHHHHHHHHhcCC
Confidence 996 45557788899999999999999887643
No 30
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.10 E-value=6.7e-10 Score=85.70 Aligned_cols=98 Identities=19% Similarity=0.230 Sum_probs=80.5
Q ss_pred cccccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEE
Q 020843 164 MFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVV 243 (320)
Q Consensus 164 ~~~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i 243 (320)
+...+|++++ ++|+++|+|+++||..|+.+...+ +.+.+.+.+++.++.++.+.. ..+++.|++..+|++
T Consensus 8 l~~~~~~~~~-----~~~~~lv~f~~~~C~~C~~~~~~~---~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~v~~~Pt~ 77 (106)
T 3die_A 8 VTDADFDSKV-----ESGVQLVDFWATACGPCKMIAPVL---EELAADYEGKADILKLDVDEN--PSTAAKYEVMSIPTL 77 (106)
T ss_dssp CCTTTHHHHS-----CSSEEEEEEECSBCHHHHHHHHHH---HHHHHHTTTTCEEEEEETTTC--HHHHHHTTCCSBSEE
T ss_pred CCHHHHHHHh-----cCCcEEEEEECCCCHHHHHHhHHH---HHHHHHhcCCcEEEEEECCcC--HHHHHhCCCcccCEE
Confidence 3456787777 799999999999999999997655 566666666788888887654 458889999999999
Q ss_pred EEEecCCCceEEEEecCCChHHHHHHHHHH
Q 020843 244 LVVDPITGQKMRSWCGMVQPESLLEDLVPF 273 (320)
Q Consensus 244 ~Iidp~tG~~v~~~~G~~~~~~fl~~L~~f 273 (320)
+++. .|+.+.++.|..+.+++.+.|.+.
T Consensus 78 ~~~~--~G~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 3die_A 78 IVFK--DGQPVDKVVGFQPKENLAEVLDKH 105 (106)
T ss_dssp EEEE--TTEEEEEEESCCCHHHHHHHHHTT
T ss_pred EEEe--CCeEEEEEeCCCCHHHHHHHHHHh
Confidence 9996 699999999999998888877653
No 31
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.09 E-value=4.1e-10 Score=92.35 Aligned_cols=96 Identities=14% Similarity=0.197 Sum_probs=78.7
Q ss_pred hcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCCceEEEE
Q 020843 178 VQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSW 257 (320)
Q Consensus 178 ~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~ 257 (320)
+.+|+++|+|+++||..|+.+...+ +.+.+.++.++.++.++.+.. ..+++.|++..+|+++|+++ .|+.+ .+
T Consensus 36 ~~~k~~lv~f~a~wC~~C~~~~~~l---~~l~~~~~~~v~~~~vd~~~~--~~l~~~~~v~~~Pt~~~~~~-~G~~~-~~ 108 (136)
T 2l5l_A 36 EGDKPAIVDFYADWCGPCKMVAPIL---DELAKEYDGQIVIYKVDTEKE--QELAGAFGIRSIPSILFIPM-EGKPE-MA 108 (136)
T ss_dssp CCSSCEEEEEECTTSHHHHHHHHHH---HHHHHHTTTTCEEEEEETTTC--HHHHHHTTCCSSCEEEEECS-SSCCE-EE
T ss_pred cCCCEEEEEEECCcCHHHHHHHHHH---HHHHHHhcCCEEEEEEeCCCC--HHHHHHcCCCCCCEEEEECC-CCcEE-EE
Confidence 3679999999999999999997644 455555666799999998764 36888999999999999986 58877 67
Q ss_pred ecCCChHHHHHHHHHHHhcCCCc
Q 020843 258 CGMVQPESLLEDLVPFMDGGPRE 280 (320)
Q Consensus 258 ~G~~~~~~fl~~L~~fld~~~~d 280 (320)
.|..+++++.+.|.+.+...+-+
T Consensus 109 ~G~~~~~~l~~~l~~~~~~~~~~ 131 (136)
T 2l5l_A 109 QGAMPKASFKKAIDEFLLKKEGH 131 (136)
T ss_dssp ESCCCHHHHHHHHHHHHTSCTTS
T ss_pred eCCCCHHHHHHHHHHHhhccCCC
Confidence 89999999999999888765443
No 32
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.09 E-value=4.8e-10 Score=87.72 Aligned_cols=99 Identities=13% Similarity=0.235 Sum_probs=81.2
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc--ceEEEEeecCChHHHHHHHHcCCCCCcEE
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST--NFIFWQVYDDTSEGKKVCTYYKLDSIPVV 243 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~--nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i 243 (320)
..+|++++..|+..+|+++|+|+++||..|+.+.. .+.++.++ ++.|+.++.+.. ..+++.|++..+|++
T Consensus 12 ~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~------~l~~~~~~~~~v~~~~v~~~~~--~~~~~~~~v~~~Pt~ 83 (113)
T 1ti3_A 12 VDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAP------IFAELAKKFPNVTFLKVDVDEL--KAVAEEWNVEAMPTF 83 (113)
T ss_dssp HHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHH------HHHHHHHHCSSEEEEEEETTTC--HHHHHHHHCSSTTEE
T ss_pred HHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHH------HHHHHHHhCCCcEEEEEEcccc--HHHHHhCCCCcccEE
Confidence 35899999999999999999999999999999964 34444443 688999988753 457888999999999
Q ss_pred EEEecCCCceEEEEecCCChHHHHHHHHHHHh
Q 020843 244 LVVDPITGQKMRSWCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 244 ~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld 275 (320)
+++. .|+.+.++.| .+++.+.+.|.+++.
T Consensus 84 ~~~~--~G~~~~~~~g-~~~~~l~~~l~~~~~ 112 (113)
T 1ti3_A 84 IFLK--DGKLVDKTVG-ADKDGLPTLVAKHAT 112 (113)
T ss_dssp EEEE--TTEEEEEEEC-CCTTHHHHHHHHHHH
T ss_pred EEEe--CCEEEEEEec-CCHHHHHHHHHHhhc
Confidence 9884 6999988899 588888888887763
No 33
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.09 E-value=9.9e-10 Score=85.20 Aligned_cols=98 Identities=15% Similarity=0.261 Sum_probs=78.1
Q ss_pred HHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecC
Q 020843 170 EKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPI 249 (320)
Q Consensus 170 ~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~ 249 (320)
++..+...+.+|+++|+|+++||..|+.+...+ +.+.+.++.++.++.++.+.. ..+++.|++..+|+++|+ +
T Consensus 9 ~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~v~~~Pt~~~~-~- 81 (107)
T 1dby_A 9 DTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVV---DEIAGEYKDKLKCVKLNTDES--PNVASEYGIRSIPTIMVF-K- 81 (107)
T ss_dssp HHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTCEEEEEETTTC--HHHHHHHTCCSSCEEEEE-S-
T ss_pred HHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHH---HHHHHHhCCceEEEEEECCCC--HHHHHHCCCCcCCEEEEE-e-
Confidence 334444556799999999999999999997654 455555666788999987754 358889999999998887 3
Q ss_pred CCceEEEEecCCChHHHHHHHHHHH
Q 020843 250 TGQKMRSWCGMVQPESLLEDLVPFM 274 (320)
Q Consensus 250 tG~~v~~~~G~~~~~~fl~~L~~fl 274 (320)
.|+.+.++.|..+.+++.+.|.+.+
T Consensus 82 ~G~~~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 82 GGKKCETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp SSSEEEEEESCCCHHHHHHHHHHHC
T ss_pred CCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 6999999999999998888887765
No 34
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.09 E-value=1.1e-09 Score=85.72 Aligned_cols=101 Identities=17% Similarity=0.209 Sum_probs=82.1
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEE
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLV 245 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~I 245 (320)
..+|++.+ .+.+|+++|+|+++||..|+.+...+ +.+.+.+..++.++.++.+.. ..+++.|++..+|++++
T Consensus 14 ~~~~~~~~---~~~~~~~lv~f~~~~C~~C~~~~~~l---~~~~~~~~~~v~~~~v~~~~~--~~~~~~~~v~~~Pt~~~ 85 (115)
T 1thx_A 14 DAEFESEV---LKAEQPVLVYFWASWCGPCQLMSPLI---NLAANTYSDRLKVVKLEIDPN--PTTVKKYKVEGVPALRL 85 (115)
T ss_dssp GGGHHHHT---TTCSSCEEEEEECTTCTTHHHHHHHH---HHHHHHTTTTCEEEEEESTTC--HHHHHHTTCCSSSEEEE
T ss_pred ccchhhHh---hcCCceEEEEEECCCCHHHHHhHHHH---HHHHHHhCCcEEEEEEEcCCC--HHHHHHcCCCceeEEEE
Confidence 34565554 46799999999999999999997654 556666666789999998754 35888999999999999
Q ss_pred EecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 246 VDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 246 idp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
+ + .|+.+.++.|..+.+++.+.|.+.+..
T Consensus 86 ~-~-~G~~~~~~~g~~~~~~l~~~l~~~l~~ 114 (115)
T 1thx_A 86 V-K-GEQILDSTEGVISKDKLLSFLDTHLNN 114 (115)
T ss_dssp E-E-TTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred E-c-CCEEEEEecCCCCHHHHHHHHHHHhcC
Confidence 9 4 699998899999999999998887753
No 35
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.08 E-value=9.1e-10 Score=85.11 Aligned_cols=98 Identities=15% Similarity=0.201 Sum_probs=79.4
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEE
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLV 245 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~I 245 (320)
..+|++.+ .+.+|+++|+|+++||..|+.+...+ +.+.+.+..++.++.++.+... .+++.|++..+|++++
T Consensus 9 ~~~~~~~~---~~~~~~~lv~f~~~~C~~C~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~v~~~Pt~~~ 80 (107)
T 2i4a_A 9 DSSFDQDV---LKASGLVLVDFWAEWCGPCKMIGPAL---GEIGKEFAGKVTVAKVNIDDNP--ETPNAYQVRSIPTLML 80 (107)
T ss_dssp TTTHHHHT---TTCSSEEEEEEECTTCHHHHHHHHHH---HHHHHHHTTSEEEEEEETTTCC--HHHHHTTCCSSSEEEE
T ss_pred hhhhhHHH---HhCCCEEEEEEECCCChhHHHHhHHH---HHHHHHhCCcEEEEEEECCCCH--HHHHhcCCCccCEEEE
Confidence 34565544 46799999999999999999997765 5666666668999999987543 5788999999999999
Q ss_pred EecCCCceEEEEecCCChHHHHHHHHHH
Q 020843 246 VDPITGQKMRSWCGMVQPESLLEDLVPF 273 (320)
Q Consensus 246 idp~tG~~v~~~~G~~~~~~fl~~L~~f 273 (320)
+ + .|+.+.++.|..+.+++.+.|.+.
T Consensus 81 ~-~-~G~~~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 81 V-R-DGKVIDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp E-E-TTEEEEEEESCCCHHHHHHHHHHT
T ss_pred E-e-CCEEEEEecCCCCHHHHHHHHHhc
Confidence 9 4 699999999999999888877653
No 36
>2dzl_A Protein FAM100B; UBA-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.07 E-value=9.7e-11 Score=86.46 Aligned_cols=40 Identities=30% Similarity=0.610 Sum_probs=38.0
Q ss_pred HHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCCC
Q 020843 12 SMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNE 52 (320)
Q Consensus 12 ~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 52 (320)
++|.+|++| ||+++++|++||++++||||.||+.||+...
T Consensus 19 ~~i~qF~~i-Tg~~~~~A~~~Le~~~WdLe~Al~~ff~~~~ 58 (66)
T 2dzl_A 19 VMINQFVLA-AGCAADQAKQLLQAAHWQFETALSTFFQETN 58 (66)
T ss_dssp HHHHHHHHH-HCCCHHHHHHHHHTTTTCHHHHHHHHHTCSC
T ss_pred HHHHHHHHH-cCCCHHHHHHHHHHcCCCHHHHHHHHHcCCC
Confidence 899999999 8999999999999999999999999998654
No 37
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.07 E-value=2.1e-10 Score=97.95 Aligned_cols=120 Identities=18% Similarity=0.232 Sum_probs=88.3
Q ss_pred hhhhcCCCccccccccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHH
Q 020843 153 LASLYRPPFHLMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVC 232 (320)
Q Consensus 153 l~~lf~Ppf~~~~~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~ 232 (320)
+...|.+.+.+ .+|++++..+..++|++||+|+++||.+|+.+...+-.-.... -.+-+||.+.++.+... ++
T Consensus 22 ~~~~~~~~i~w---~~~~~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~-~~~~~~~~v~~d~~~~~---~~ 94 (164)
T 1sen_A 22 LGKGFGDHIHW---RTLEDGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEIS-ELSHNFVMVNLEDEEEP---KD 94 (164)
T ss_dssp CCTTSCTTSCB---CCHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHH-HHHTTSEEEEEEGGGSC---SC
T ss_pred ccccccccccc---cCHHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHh-hcCCeEEEEEecCCchH---HH
Confidence 33445666666 7899999999999999999999999999999987443322111 12345666666544322 45
Q ss_pred HHcCC--CCCcEEEEEecCCCceEEEEecC----------CChHHHHHHHHHHHhcCCCc
Q 020843 233 TYYKL--DSIPVVLVVDPITGQKMRSWCGM----------VQPESLLEDLVPFMDGGPRE 280 (320)
Q Consensus 233 ~~Y~v--~~~P~i~Iidp~tG~~v~~~~G~----------~~~~~fl~~L~~fld~~~~d 280 (320)
..|.+ ..+|+++|+|+ .|+.+.++.|. .++++|++.|.+.++...-+
T Consensus 95 ~~~~~~~~~~Pt~~~~d~-~G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~ 153 (164)
T 1sen_A 95 EDFSPDGGYIPRILFLDP-SGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQERLTGD 153 (164)
T ss_dssp GGGCTTCSCSSEEEEECT-TSCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHHHHHGGG
T ss_pred HHhcccCCcCCeEEEECC-CCCEEEEEeCCCCccchhcccCCHHHHHHHHHHHHHhccHh
Confidence 56777 56999999997 59888877884 78999999999998764433
No 38
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.07 E-value=5.8e-10 Score=86.26 Aligned_cols=93 Identities=16% Similarity=0.203 Sum_probs=74.7
Q ss_pred HHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCCceE
Q 020843 175 AASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKM 254 (320)
Q Consensus 175 ~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v 254 (320)
.+.+.+|+++|+|+++||..|+.+...+ +.+.+.+.+++.++.++.+.. ..+++.|++..+|+++++ + .|+.+
T Consensus 12 ~~~~~~~~~~v~f~~~~C~~C~~~~~~l---~~~~~~~~~~v~~~~v~~~~~--~~~~~~~~v~~~Pt~~~~-~-~G~~~ 84 (105)
T 1nsw_A 12 QAIQGDGPVLVDFWAAWCGPCRMMAPVL---EEFAEAHADKVTVAKLNVDEN--PETTSQFGIMSIPTLILF-K-GGRPV 84 (105)
T ss_dssp HHHSSSSCEEEEEECTTCHHHHHHHHHH---HHHHHHSTTTCEEEEEETTTC--HHHHHHTTCCSSSEEEEE-E-TTEEE
T ss_pred HHHhCCCcEEEEEECCCCHHHHHHHHHH---HHHHHHhcCCcEEEEEECcCC--HHHHHHcCCccccEEEEE-e-CCeEE
Confidence 3446789999999999999999997654 455555666788999988754 458889999999999999 4 69988
Q ss_pred EEEecCCChHHHHHHHHHHH
Q 020843 255 RSWCGMVQPESLLEDLVPFM 274 (320)
Q Consensus 255 ~~~~G~~~~~~fl~~L~~fl 274 (320)
.++.|..+++++.+.|.+.+
T Consensus 85 ~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 85 KQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp EEEESCCCHHHHHHHTTTTT
T ss_pred EEEecCCCHHHHHHHHHHHh
Confidence 88999999888777665443
No 39
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.07 E-value=8.5e-10 Score=85.72 Aligned_cols=98 Identities=16% Similarity=0.190 Sum_probs=78.9
Q ss_pred ccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEE
Q 020843 167 GSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVV 246 (320)
Q Consensus 167 gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Ii 246 (320)
.+|++.. .+.+|+++|+|+++||..|+.+...+ +.+.+.++.++.++.++.+... .+++.|++..+|+++++
T Consensus 10 ~~f~~~~---~~~~~~~~v~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~v~~~Pt~~~~ 81 (108)
T 2trx_A 10 DSFDTDV---LKADGAILVDFWAEWCGPCKMIAPIL---DEIADEYQGKLTVAKLNIDQNP--GTAPKYGIRGIPTLLLF 81 (108)
T ss_dssp TTHHHHT---TTCSSEEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTEEEEEEETTTCT--THHHHTTCCSSSEEEEE
T ss_pred hhHHHHH---HhcCCeEEEEEECCCCHhHHHHHHHH---HHHHHHhCCCcEEEEEECCCCH--HHHHHcCCcccCEEEEE
Confidence 4565443 46789999999999999999997654 4555556667999999987543 47889999999999999
Q ss_pred ecCCCceEEEEecCCChHHHHHHHHHHH
Q 020843 247 DPITGQKMRSWCGMVQPESLLEDLVPFM 274 (320)
Q Consensus 247 dp~tG~~v~~~~G~~~~~~fl~~L~~fl 274 (320)
+ .|+.+.++.|..+++++.+.|.+.+
T Consensus 82 -~-~G~~~~~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 82 -K-NGEVAATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp -E-TTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred -e-CCEEEEEEecCCCHHHHHHHHHHhh
Confidence 3 6999999999999999888887765
No 40
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.07 E-value=2e-09 Score=82.25 Aligned_cols=98 Identities=14% Similarity=0.221 Sum_probs=78.0
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEE
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLV 245 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~I 245 (320)
..+|++++ +.+|+++|+|+++||..|+.+...+ +.+.+.+.+ +.++.++.+.. ..+++.|++..+|++++
T Consensus 6 ~~~~~~~~----~~~~~~~v~f~~~~C~~C~~~~~~~---~~~~~~~~~-~~~~~v~~~~~--~~~~~~~~v~~~Pt~~~ 75 (104)
T 2e0q_A 6 SKNFDSFL----ASHEIAVVDFWAEWCAPCLILAPII---EELAEDYPQ-VGFGKLNSDEN--PDIAARYGVMSLPTVIF 75 (104)
T ss_dssp TTTHHHHH----HHSSEEEEEEECTTCHHHHHHHHHH---HHHHHHCTT-SEEEEEETTTC--HHHHHHTTCCSSCEEEE
T ss_pred HHHHHHHH----hcCCcEEEEEECCCChhHHHHhHHH---HHHHHHcCC-ceEEEEECCCC--HHHHHhCCccccCEEEE
Confidence 35677777 4689999999999999999996533 234444443 88888887754 45888999999999999
Q ss_pred EecCCCceEEEEecCCChHHHHHHHHHHHh
Q 020843 246 VDPITGQKMRSWCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 246 idp~tG~~v~~~~G~~~~~~fl~~L~~fld 275 (320)
+ + .|+.+.++.|..+.+++.+.|.+.+.
T Consensus 76 ~-~-~g~~~~~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 76 F-K-DGEPVDEIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp E-E-TTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred E-E-CCeEhhhccCCCCHHHHHHHHHHHhc
Confidence 9 3 69999899999999999988888764
No 41
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.06 E-value=8.6e-10 Score=86.42 Aligned_cols=93 Identities=18% Similarity=0.227 Sum_probs=75.7
Q ss_pred HHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCCceEE
Q 020843 176 ASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMR 255 (320)
Q Consensus 176 Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~ 255 (320)
..+.+|+++|+|+++||..|+.+...+ +.+.+.+..++.++.++.+.. ..+++.|++..+|+++|+. .|+.+.
T Consensus 19 ~~~~~~~~vv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~v~~~Pt~~~~~--~G~~~~ 91 (112)
T 1t00_A 19 VLKNDKPVLVDFWAAWCGPCRQIAPSL---EAIAAEYGDKIEIVKLNIDEN--PGTAAKYGVMSIPTLNVYQ--GGEVAK 91 (112)
T ss_dssp TTTCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTCEEEEEETTTC--HHHHHHTTCCSSSEEEEEE--TTEEEE
T ss_pred HhhCCCeEEEEEECCCCHhHHhcCHHH---HHHHHHhcCCeEEEEEEcCCC--HHHHHhCCCCcccEEEEEe--CCEEEE
Confidence 346789999999999999999997543 345555556789999998754 4588899999999998873 699999
Q ss_pred EEecCCChHHHHHHHHHHHh
Q 020843 256 SWCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 256 ~~~G~~~~~~fl~~L~~fld 275 (320)
++.|..+.+++.+.|.+.+.
T Consensus 92 ~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 92 TIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp EEESCCCHHHHHHHTHHHHC
T ss_pred EEeCCCCHHHHHHHHHHHhh
Confidence 99999999999988887764
No 42
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.06 E-value=1.1e-09 Score=84.54 Aligned_cols=98 Identities=16% Similarity=0.246 Sum_probs=78.8
Q ss_pred ccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEE
Q 020843 167 GSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVV 246 (320)
Q Consensus 167 gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Ii 246 (320)
.+|++++ +.+|+++|+|+++||..|+.+...+ +.+.+.+..++.++.++.+.. ..+++.|++..+|+++++
T Consensus 9 ~~~~~~~----~~~~~~lv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~v~~~Pt~~~~ 79 (109)
T 2yzu_A 9 QNFDETL----GQHPLVLVDFWAEWCAPCRMIAPIL---EEIAKEYEGKLLVAKLDVDEN--PKTAMRYRVMSIPTVILF 79 (109)
T ss_dssp TTHHHHH----HHCSEEEEEEECTTCHHHHHHHHHH---HHHHHHTBTTBEEEEEETTTC--HHHHHHTTCCSSSEEEEE
T ss_pred hHHHHHh----cCCCeEEEEEECCCCHHHHHhhHHH---HHHHHHhhCceEEEEEECCCC--HhHHHhCCCCcCCEEEEE
Confidence 4666544 5689999999999999999997654 556666666799999998764 358889999999999999
Q ss_pred ecCCCceEEEEecCCChHHHHHHHHHHHh
Q 020843 247 DPITGQKMRSWCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 247 dp~tG~~v~~~~G~~~~~~fl~~L~~fld 275 (320)
+ .|+.+.++.|..+.+++.+.|.+.+.
T Consensus 80 -~-~g~~~~~~~g~~~~~~l~~~l~~~l~ 106 (109)
T 2yzu_A 80 -K-DGQPVEVLVGAQPKRNYQAKIEKHLP 106 (109)
T ss_dssp -E-TTEEEEEEESCCCHHHHHHHHHTTC-
T ss_pred -e-CCcEeeeEeCCCCHHHHHHHHHHHhh
Confidence 3 69998889999999888888776553
No 43
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.06 E-value=9.4e-10 Score=90.72 Aligned_cols=102 Identities=12% Similarity=0.087 Sum_probs=85.2
Q ss_pred cHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEe
Q 020843 168 SFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVD 247 (320)
Q Consensus 168 sf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iid 247 (320)
+-++..+...+.+|++||+|+++||..|+.+...+ +.+.+.+..++.|+.+|.+.. ..+++.|++..+|+++|+.
T Consensus 12 ~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l---~~l~~~~~~~v~~~~vd~~~~--~~l~~~~~v~~~Pt~~~~~ 86 (140)
T 3hz4_A 12 EDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYF---EEYAKEYGSSAVFGRINIATN--PWTAEKYGVQGTPTFKFFC 86 (140)
T ss_dssp CHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHHTTTSEEEEEETTTC--HHHHHHHTCCEESEEEEEE
T ss_pred chHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHH---HHHHHHhCCceEEEEEECCcC--HhHHHHCCCCcCCEEEEEe
Confidence 44444456667799999999999999999997655 667777777799999998754 4688899999999999984
Q ss_pred cCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 248 PITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 248 p~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
.|+.+.++.|..++++|.+.|.+.+..
T Consensus 87 --~G~~~~~~~G~~~~~~l~~~l~~~l~~ 113 (140)
T 3hz4_A 87 --HGRPVWEQVGQIYPSILKNAVRDMLQH 113 (140)
T ss_dssp --TTEEEEEEESSCCHHHHHHHHHHHHHH
T ss_pred --CCcEEEEEcCCCCHHHHHHHHHHHhcc
Confidence 699999999999999999999999865
No 44
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.06 E-value=1.3e-09 Score=87.84 Aligned_cols=100 Identities=11% Similarity=0.169 Sum_probs=81.6
Q ss_pred ccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh----cceEEEEeecCChHHHHHHHHcCCCCCcE
Q 020843 167 GSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS----TNFIFWQVYDDTSEGKKVCTYYKLDSIPV 242 (320)
Q Consensus 167 gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~----~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~ 242 (320)
.+|++.+ .+.+|++||+|+++||..|+.+...+ ..+.+.++ .++.|+.+|.+.. ..+++.|++..+|+
T Consensus 15 ~~~~~~~---~~~~~~~lv~f~a~wC~~C~~~~~~~---~~~~~~~~~~~~~~~~~~~vd~~~~--~~l~~~~~v~~~Pt 86 (133)
T 1x5d_A 15 DSFDKNV---LDSEDVWMVEFYAPWCGHCKNLEPEW---AAAASEVKEQTKGKVKLAAVDATVN--QVLASRYGIRGFPT 86 (133)
T ss_dssp THHHHHT---TTSSSEEEEEEECTTCHHHHTHHHHH---HHHHHHHHHHTTTSEEEEEEETTTC--CHHHHHHTCCSSSE
T ss_pred hhHHHHH---hcCCCeEEEEEECCCCHHHHhhcHHH---HHHHHHHHhhcCCcEEEEEEECCCC--HHHHHhCCCCeeCe
Confidence 4555443 45689999999999999999997655 45555565 6799999988754 35888999999999
Q ss_pred EEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 243 VLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 243 i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
++|+++ |+.+.++.|..+.+++.+.|.+.+..
T Consensus 87 ~~~~~~--g~~~~~~~G~~~~~~l~~~l~~~~~~ 118 (133)
T 1x5d_A 87 IKIFQK--GESPVDYDGGRTRSDIVSRALDLFSD 118 (133)
T ss_dssp EEEEET--TEEEEEECSCCSHHHHHHHHHHHHHH
T ss_pred EEEEeC--CCceEEecCCCCHHHHHHHHHHHhhc
Confidence 999996 88888889999999999999998865
No 45
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.05 E-value=1e-09 Score=89.73 Aligned_cols=90 Identities=18% Similarity=0.198 Sum_probs=75.7
Q ss_pred cCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCCceEEEEe
Q 020843 179 QDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSWC 258 (320)
Q Consensus 179 ~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~ 258 (320)
.+|++||+|+++||..|+.+...+ +.+.+.+..++.++.++.+.. ..+++.|++..+|+++|+++ .|+.+ +..
T Consensus 50 ~~k~vlv~f~a~wC~~C~~~~~~~---~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~v~~~Pt~~~~~~-~g~~~-~~~ 122 (141)
T 3hxs_A 50 GDKPAIVDFYADWCGPCKMVAPIL---EELSKEYAGKIYIYKVNVDKE--PELARDFGIQSIPTIWFVPM-KGEPQ-VNM 122 (141)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHHH---HHHHHHTTTTCEEEEEETTTC--HHHHHHTTCCSSSEEEEECS-SSCCE-EEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHH---HHHHHHhcCceEEEEEECCCC--HHHHHHcCCCCcCEEEEEeC-CCCEE-EEe
Confidence 689999999999999999997654 566666666899999998764 45889999999999999996 57766 778
Q ss_pred cCCChHHHHHHHHHHHh
Q 020843 259 GMVQPESLLEDLVPFMD 275 (320)
Q Consensus 259 G~~~~~~fl~~L~~fld 275 (320)
|..+.+++.+.|.+.+.
T Consensus 123 G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 123 GALSKEQLKGYIDKVLL 139 (141)
T ss_dssp SCCCHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHc
Confidence 99999999988888765
No 46
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.04 E-value=1.4e-09 Score=85.43 Aligned_cols=97 Identities=12% Similarity=0.328 Sum_probs=73.6
Q ss_pred ccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh----cceEEEEeecCChHHHHHHHHcCCCCCcE
Q 020843 167 GSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS----TNFIFWQVYDDTSEGKKVCTYYKLDSIPV 242 (320)
Q Consensus 167 gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~----~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~ 242 (320)
.+|++++.. +..+|+++|+|+++||..|+.+.. .+.++.+ .++.|+.+|.+.. ..+++.|++..+|+
T Consensus 9 ~~~~~~~~~-~~~~~~~~v~f~a~wC~~C~~~~~------~~~~~~~~~~~~~~~~~~vd~~~~--~~~~~~~~v~~~Pt 79 (112)
T 3d6i_A 9 EQFTYLTTT-AAGDKLIVLYFHTSWAEPCKALKQ------VFEAISNEPSNSNVSFLSIDADEN--SEISELFEISAVPY 79 (112)
T ss_dssp HHHHHHHTT-TTTTCCEEEEEECCC--CHHHHHH------HHHHHHHCGGGTTSEEEEEETTTC--HHHHHHTTCCSSSE
T ss_pred HHHHHHHhc-ccCCCEEEEEEECCCCHHHHHHHH------HHHHHHHhcCCCCEEEEEEecccC--HHHHHHcCCCcccE
Confidence 467776655 467999999999999999999964 3444443 3689999998754 35888999999999
Q ss_pred EEEEecCCCceEEEEecCCChHHHHHHHHHHHh
Q 020843 243 VLVVDPITGQKMRSWCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 243 i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld 275 (320)
++|+. .|+.+.++.|. .++++.+.|.+.+.
T Consensus 80 ~~~~~--~G~~~~~~~G~-~~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 80 FIIIH--KGTILKELSGA-DPKEYVSLLEDCKN 109 (112)
T ss_dssp EEEEE--TTEEEEEECSC-CHHHHHHHHHHHHH
T ss_pred EEEEE--CCEEEEEecCC-CHHHHHHHHHHHHh
Confidence 99884 69999999997 55667777776654
No 47
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.04 E-value=1.5e-09 Score=85.61 Aligned_cols=89 Identities=18% Similarity=0.299 Sum_probs=69.6
Q ss_pred HHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc--ceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCC
Q 020843 174 DAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST--NFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITG 251 (320)
Q Consensus 174 ~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~--nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG 251 (320)
+.+.+++|+++|+|+++||..|+.+.. .+.++.++ ++.|+.++.+.. ..+++.|++..+|++++++ .|
T Consensus 18 ~~~~~~~k~vlv~f~a~wC~~C~~~~p------~l~~l~~~~~~~~~~~vd~~~~--~~l~~~~~v~~~Pt~~~~~--~G 87 (109)
T 3f3q_A 18 DSAIAQDKLVVVDFYATWCGPCKMIAP------MIEKFSEQYPQADFYKLDVDEL--GDVAQKNEVSAMPTLLLFK--NG 87 (109)
T ss_dssp HHHTTSSSCEEEEEECTTCHHHHHHHH------HHHHHHHHCTTSEEEEEETTTC--HHHHHHTTCCSSSEEEEEE--TT
T ss_pred HHHHhcCCEEEEEEECCcCHhHHHHHH------HHHHHHHHCCCCEEEEEECCCC--HHHHHHcCCCccCEEEEEE--CC
Confidence 344567999999999999999999974 34444432 478888887653 4588999999999999998 59
Q ss_pred ceEEEEecCCChHHHHHHHHHH
Q 020843 252 QKMRSWCGMVQPESLLEDLVPF 273 (320)
Q Consensus 252 ~~v~~~~G~~~~~~fl~~L~~f 273 (320)
+.+.++.|. +++++.+.|.+.
T Consensus 88 ~~~~~~~G~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 88 KEVAKVVGA-NPAAIKQAIAAN 108 (109)
T ss_dssp EEEEEEESS-CHHHHHHHHHHH
T ss_pred EEEEEEeCC-CHHHHHHHHHhh
Confidence 999999997 677777766653
No 48
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.04 E-value=7e-10 Score=89.87 Aligned_cols=92 Identities=8% Similarity=0.186 Sum_probs=76.7
Q ss_pred HHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCCc
Q 020843 173 KDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQ 252 (320)
Q Consensus 173 ~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~ 252 (320)
...+..++|++||+|+++||..|+.+...+ +.+.+.++.++.++.++.+.. ..+++.|++..+|+++++. .|+
T Consensus 35 ~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l---~~~~~~~~~~v~~~~vd~d~~--~~l~~~~~v~~~Pt~~~~~--~G~ 107 (128)
T 3ul3_B 35 INGVNMKNTVIVLYFFAKWCQACTMQSTEM---DKLQKYYGKRIYLLKVDLDKN--ESLARKFSVKSLPTIILLK--NKT 107 (128)
T ss_dssp SSBTTSCCSEEEEEEECTTCHHHHHHHHHH---HHHHHHHGGGEEEEEEEGGGC--HHHHHHTTCCSSSEEEEEE--TTE
T ss_pred HHHHHccCCEEEEEEECCCCHHHHHHhHHH---HHHHHHhcCCeEEEEEECCCC--HHHHHHcCCCCcCEEEEEE--CCE
Confidence 344567899999999999999999997664 566666777899999998754 3688999999999999994 599
Q ss_pred eEEEEecCCChHHHHHHHH
Q 020843 253 KMRSWCGMVQPESLLEDLV 271 (320)
Q Consensus 253 ~v~~~~G~~~~~~fl~~L~ 271 (320)
.+.++.|..+.+++.+.|.
T Consensus 108 ~~~~~~G~~~~~~l~~~l~ 126 (128)
T 3ul3_B 108 MLARKDHFVSSNDLIALIK 126 (128)
T ss_dssp EEEEESSCCCHHHHHHHHT
T ss_pred EEEEecCCCCHHHHHHHHH
Confidence 9999999999988877664
No 49
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.03 E-value=1.4e-09 Score=83.76 Aligned_cols=97 Identities=16% Similarity=0.294 Sum_probs=77.8
Q ss_pred ccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEE
Q 020843 167 GSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVV 246 (320)
Q Consensus 167 gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Ii 246 (320)
.+|++.. .+.+|+++|+|+++||..|+.+...+ +.+.+.++.++.++.++.+.. ..+++.|++..+|+++++
T Consensus 8 ~~~~~~~---~~~~~~~~v~f~~~~C~~C~~~~~~~---~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~v~~~Pt~~~~ 79 (105)
T 1fb6_A 8 SSWKEFV---LESEVPVMVDFWAPWCGPCKLIAPVI---DELAKEYSGKIAVYKLNTDEA--PGIATQYNIRSIPTVLFF 79 (105)
T ss_dssp TTHHHHT---TTCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTCEEEEEETTTC--HHHHHHTTCCSSSEEEEE
T ss_pred hhHHHHH---hcCCCcEEEEEECCCChHHHHHHHHH---HHHHHHhcCceEEEEEcCcch--HHHHHhCCCCcccEEEEE
Confidence 3555543 34689999999999999999997654 556666666789999988754 458889999999998887
Q ss_pred ecCCCceEEEEecCCChHHHHHHHHHH
Q 020843 247 DPITGQKMRSWCGMVQPESLLEDLVPF 273 (320)
Q Consensus 247 dp~tG~~v~~~~G~~~~~~fl~~L~~f 273 (320)
. .|+.+.++.|..+++.+.+.|.+.
T Consensus 80 ~--~g~~~~~~~G~~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 80 K--NGERKESIIGAVPKSTLTDSIEKY 104 (105)
T ss_dssp E--TTEEEEEEEECCCHHHHHHHHHHH
T ss_pred e--CCeEEEEEecCCCHHHHHHHHHhh
Confidence 3 699998899999999888888765
No 50
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.02 E-value=1.1e-09 Score=89.40 Aligned_cols=99 Identities=16% Similarity=0.199 Sum_probs=80.1
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEE
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLV 245 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~I 245 (320)
..+|++.+ .+.+|++||+|+++||..|+.+...+ +.+.+.+..++.|+.+|.+... .+++.|++..+|+++|
T Consensus 29 ~~~f~~~~---~~~~k~vlv~F~a~wC~~C~~~~p~l---~~l~~~~~~~v~~~~vd~~~~~--~l~~~~~v~~~Pt~~~ 100 (128)
T 2o8v_B 29 DDSFDTDV---LKADGAILVDFWAEWCGPAKMIAPIL---DEIADEYQGKLTVAKLNIDQNP--GTAPKYGIRGIPTLLL 100 (128)
T ss_dssp TTTHHHHT---TTCSSEEEEEEECSSCHHHHHTHHHH---HHHHHHTTTTEEEEEEETTTCC--TTSGGGTCCSSSEEEE
T ss_pred hhhHHHHH---HhcCCEEEEEEECCCCHHHHHHhHHH---HHHHHHhcCCeEEEEEECCCCH--HHHHHcCCCccCEEEE
Confidence 34666544 46799999999999999999997654 4555556667999999987543 4788999999999999
Q ss_pred EecCCCceEEEEecCCChHHHHHHHHHHH
Q 020843 246 VDPITGQKMRSWCGMVQPESLLEDLVPFM 274 (320)
Q Consensus 246 idp~tG~~v~~~~G~~~~~~fl~~L~~fl 274 (320)
+ + .|+.+.++.|..+.+++.+.|.+.+
T Consensus 101 ~-~-~G~~~~~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 101 F-K-NGEVAATKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp E-E-TTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred E-e-CCEEEEEEcCCCCHHHHHHHHHHhh
Confidence 9 3 6999989999999999988888765
No 51
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.02 E-value=2.1e-09 Score=82.94 Aligned_cols=96 Identities=27% Similarity=0.368 Sum_probs=74.6
Q ss_pred ccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEE
Q 020843 167 GSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVV 246 (320)
Q Consensus 167 gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Ii 246 (320)
.+|++++..+ ++|+++|+|+++||..|+.+...+ +.+.+... ++.++.+|.+.. ..+++.|++..+|+++++
T Consensus 9 ~~~~~~l~~~--~~~~~~v~f~~~~C~~C~~~~~~~---~~~~~~~~-~~~~~~vd~~~~--~~~~~~~~v~~~Pt~~~~ 80 (105)
T 3m9j_A 9 TAFQEALDAA--GDKLVVVDFSATWCGPCKMIKPFF---HSLSEKYS-NVIFLEVDVDDC--QDVASESEVKSMPTFQFF 80 (105)
T ss_dssp HHHHHHHHHT--TTSCEEEEEECTTCHHHHHHHHHH---HHHHHHST-TSEEEEEETTTC--HHHHHHTTCCBSSEEEEE
T ss_pred HHHHHHHHhc--CCCeEEEEEECCCChhhHHHHHHH---HHHHHHcc-CeEEEEEEhhhh--HHHHHHcCCCcCcEEEEE
Confidence 3566666543 689999999999999999997533 23333333 488888887654 468889999999999999
Q ss_pred ecCCCceEEEEecCCChHHHHHHHHHH
Q 020843 247 DPITGQKMRSWCGMVQPESLLEDLVPF 273 (320)
Q Consensus 247 dp~tG~~v~~~~G~~~~~~fl~~L~~f 273 (320)
. .|+.+.++.|. +++++.+.|.+.
T Consensus 81 ~--~g~~~~~~~g~-~~~~l~~~l~~~ 104 (105)
T 3m9j_A 81 K--KGQKVGEFSGA-NKEKLEATINEL 104 (105)
T ss_dssp E--TTEEEEEEESS-CHHHHHHHHHHH
T ss_pred E--CCeEEEEEeCC-CHHHHHHHHHHh
Confidence 4 59999999998 998888877765
No 52
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.02 E-value=3.5e-09 Score=86.30 Aligned_cols=100 Identities=11% Similarity=0.228 Sum_probs=79.5
Q ss_pred ccccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcc---eEEEEeecCChHHHHHHHHcCCCCCc
Q 020843 165 FNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTN---FIFWQVYDDTSEGKKVCTYYKLDSIP 241 (320)
Q Consensus 165 ~~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~n---FV~~q~d~~s~eg~~~~~~Y~v~~~P 241 (320)
...+|++++ +++|++||+|+++||..|+.+...+ ..+.+.++.. ++|+.+|.+.. ..+++.|++..+|
T Consensus 23 ~~~~~~~~~----~~~~~vlv~f~a~wC~~C~~~~p~~---~~~~~~~~~~~~~v~~~~vd~~~~--~~~~~~~~v~~~P 93 (140)
T 2dj1_A 23 NDGNFDNFV----ADKDTVLLEFYAPWCGHCKQFAPEY---EKIASTLKDNDPPIAVAKIDATSA--SMLASKFDVSGYP 93 (140)
T ss_dssp CTTTHHHHH----TTCSEEEEEECCTTCHHHHTTHHHH---HHHHHHHHSSSSCCEEEEECTTTC--HHHHHHTTCCSSS
T ss_pred ChHhHHHHH----hcCCeEEEEEECCCCHHHHHhhHHH---HHHHHHHhccCCceEEEEEeCccc--HHHHHHCCCCccC
Confidence 345777655 4589999999999999999997544 3444555543 89999987754 5688899999999
Q ss_pred EEEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 242 VVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 242 ~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
+++|+. .|+ +.++.|..+.++|.+.|.+.+..
T Consensus 94 t~~~~~--~G~-~~~~~g~~~~~~l~~~l~~~~~~ 125 (140)
T 2dj1_A 94 TIKILK--KGQ-AVDYDGSRTQEEIVAKVREVSQP 125 (140)
T ss_dssp EEEEEE--TTE-EEECCSCCCHHHHHHHHHHHHSS
T ss_pred eEEEEE--CCc-EEEcCCCCCHHHHHHHHHHhcCC
Confidence 999994 588 77788999999999999888764
No 53
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.02 E-value=1.9e-09 Score=91.07 Aligned_cols=98 Identities=13% Similarity=0.169 Sum_probs=80.4
Q ss_pred ccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEE
Q 020843 167 GSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVV 246 (320)
Q Consensus 167 gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Ii 246 (320)
.+|++++ +.+|+++|+|+++||..|+.+...+ +.+.+.+..++.|+.+|.+.. ..+++.|++..+|+++|+
T Consensus 55 ~~f~~~~----~~~~~vlv~F~a~wC~~C~~~~p~l---~~la~~~~~~v~~~~vd~~~~--~~l~~~~~i~~~Pt~~~~ 125 (155)
T 2ppt_A 55 AILARAE----RDDLPLLVDFWAPWCGPCRQMAPQF---QAAAATLAGQVRLAKIDTQAH--PAVAGRHRIQGIPAFILF 125 (155)
T ss_dssp HHHHHHT----TCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHHTTTCEEEEEETTTS--THHHHHTTCCSSSEEEEE
T ss_pred HHHHHHH----hCCCcEEEEEECCCCHHHHHHHHHH---HHHHHHccCCEEEEEEeCCcc--HHHHHHcCCCcCCEEEEE
Confidence 3454444 7799999999999999999997654 456666666799999998754 358889999999999999
Q ss_pred ecCCCceEEEEecCCChHHHHHHHHHHHh
Q 020843 247 DPITGQKMRSWCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 247 dp~tG~~v~~~~G~~~~~~fl~~L~~fld 275 (320)
. .|+.+.++.|..+.+++.+.|.+.+.
T Consensus 126 ~--~G~~~~~~~G~~~~~~l~~~l~~~l~ 152 (155)
T 2ppt_A 126 H--KGRELARAAGARPASELVGFVRGKLG 152 (155)
T ss_dssp E--TTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred e--CCeEEEEecCCCCHHHHHHHHHHHhc
Confidence 4 69999999999999999998888775
No 54
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.01 E-value=1.1e-09 Score=85.44 Aligned_cols=87 Identities=11% Similarity=0.153 Sum_probs=65.3
Q ss_pred hcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc--ceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCCceEE
Q 020843 178 VQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST--NFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMR 255 (320)
Q Consensus 178 ~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~--nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~ 255 (320)
+++|+++|+|+++||.+|+.+. +.+.++.++ ++.++.+|.+... .+++.|++.++|+++++. .|+.+.
T Consensus 16 ~~~~~vlv~f~a~wC~~C~~~~------p~~~~~~~~~~~~~~~~vd~~~~~--~l~~~~~v~~~Pt~~~~~--~G~~~~ 85 (105)
T 4euy_A 16 EEQQLVLLFIKTENCGVCDVML------RKVNYVLENYNYVEKIEILLQDMQ--EIAGRYAVFTGPTVLLFY--NGKEIL 85 (105)
T ss_dssp TCSSEEEEEEEESSCHHHHHHH------HHHHHHHHTCTTEEEEEEEECCC-----------CCCCEEEEEE--TTEEEE
T ss_pred hcCCCEEEEEeCCCCcchHHHH------HHHHHHHHHcCCceEEEEECCCCH--HHHHhcCCCCCCEEEEEe--CCeEEE
Confidence 5789999999999999999996 444555443 6899999887543 578899999999999996 699999
Q ss_pred EEecCCChHHHHHHHHHHH
Q 020843 256 SWCGMVQPESLLEDLVPFM 274 (320)
Q Consensus 256 ~~~G~~~~~~fl~~L~~fl 274 (320)
++.|..+.+++.+.|.+++
T Consensus 86 ~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 86 RESRFISLENLERTIQLFE 104 (105)
T ss_dssp EEESSCCHHHHHHHHHTTC
T ss_pred EEeCCcCHHHHHHHHHHhh
Confidence 9999999999988887654
No 55
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.01 E-value=1.8e-09 Score=86.00 Aligned_cols=103 Identities=8% Similarity=0.012 Sum_probs=81.1
Q ss_pred cHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEe
Q 020843 168 SFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVD 247 (320)
Q Consensus 168 sf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iid 247 (320)
+-++..+...+.+|++||+|+++||..|+.+...+ +.+.+.+..++.|+.+|.+.. ..+++.|++..+|++++++
T Consensus 9 ~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~---~~~~~~~~~~~~~~~vd~~~~--~~~~~~~~v~~~Pt~~~~~ 83 (122)
T 3aps_A 9 TPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEF---ELLARMIKGKVRAGKVDCQAY--PQTCQKAGIKAYPSVKLYQ 83 (122)
T ss_dssp CHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHHTTTCEEEEEETTTC--HHHHHHTTCCSSSEEEEEE
T ss_pred CHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHH---HHHHHHhcCCeEEEEEeCcCC--HHHHHHcCCCccceEEEEe
Confidence 33444455567899999999999999999997654 456666666899999998764 3588899999999999998
Q ss_pred cCCCceEEEEecC----CChHHHHHHHHHHHhcC
Q 020843 248 PITGQKMRSWCGM----VQPESLLEDLVPFMDGG 277 (320)
Q Consensus 248 p~tG~~v~~~~G~----~~~~~fl~~L~~fld~~ 277 (320)
+ .|+ +.++.|. .+++.+.+.|.+.+...
T Consensus 84 ~-~~~-~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 115 (122)
T 3aps_A 84 Y-ERA-KKSIWEEQINSRDAKTIAALIYGKLETL 115 (122)
T ss_dssp E-EGG-GTEEEEEEECCSCHHHHHHHHHHHHHCC
T ss_pred C-CCc-cceeeccccCcCCHHHHHHHHHHHHHhh
Confidence 6 344 6666675 79999999999988753
No 56
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.00 E-value=2.6e-09 Score=86.98 Aligned_cols=97 Identities=13% Similarity=0.237 Sum_probs=76.0
Q ss_pred ccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEE
Q 020843 167 GSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVV 246 (320)
Q Consensus 167 gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Ii 246 (320)
.+|++++ +.+|+++|+|+++||..|+.+...+ +.+.+.+ .++.|+.+|.+.. ..+++.|++..+|+++|+
T Consensus 28 ~~f~~~~----~~~k~vvv~F~a~wC~~C~~~~p~l---~~l~~~~-~~v~~~~vd~d~~--~~l~~~~~v~~~Pt~~i~ 97 (125)
T 1r26_A 28 EQFRNIM----SEDILTVAWFTAVWCGPCKTIERPM---EKIAYEF-PTVKFAKVDADNN--SEIVSKCRVLQLPTFIIA 97 (125)
T ss_dssp HHHHHHH----HSSSCEEEEEECTTCHHHHHTHHHH---HHHHHHC-TTSEEEEEETTTC--HHHHHHTTCCSSSEEEEE
T ss_pred HHHHHHH----ccCCEEEEEEECCcCHhHHHHHHHH---HHHHHHC-CCCEEEEEECCCC--HHHHHHcCCCcccEEEEE
Confidence 4566665 6899999999999999999997542 2233333 3699999998754 458889999999998887
Q ss_pred ecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 247 DPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 247 dp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
+ .|+.+.++.| .+++++.+.|.+.+..
T Consensus 98 -~-~G~~~~~~~G-~~~~~l~~~l~~~l~~ 124 (125)
T 1r26_A 98 -R-SGKMLGHVIG-ANPGMLRQKLRDIIKD 124 (125)
T ss_dssp -E-TTEEEEEEES-SCHHHHHHHHHHHHHC
T ss_pred -e-CCeEEEEEeC-CCHHHHHHHHHHHhcC
Confidence 3 6999988999 6888888888887753
No 57
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.00 E-value=2.7e-09 Score=85.52 Aligned_cols=103 Identities=17% Similarity=0.227 Sum_probs=77.9
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEE
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLV 245 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~I 245 (320)
.|+.++..+..++.+|++||+|+++||..|+.+...+ +.+.+.+ .++.|+.+|.+.. ..+++.|++..+|+++|
T Consensus 9 ~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l---~~l~~~~-~~v~~~~vd~~~~--~~~~~~~~i~~~Pt~~~ 82 (118)
T 2f51_A 9 NGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQIL---PSIAEAN-KDVTFIKVDVDKN--GNAADAYGVSSIPALFF 82 (118)
T ss_dssp CSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHC-TTSEEEEEETTTC--HHHHHHTTCCSSSEEEE
T ss_pred cCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHH---HHHHHHC-CCeEEEEEECCCC--HHHHHhcCCCCCCEEEE
Confidence 5677777666667899999999999999999997654 3444444 5799999998754 45888999999999999
Q ss_pred EecC--CCceEEEEecCCChHHHHHHHHHHHh
Q 020843 246 VDPI--TGQKMRSWCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 246 idp~--tG~~v~~~~G~~~~~~fl~~L~~fld 275 (320)
++.. .|+.+.++.|..+ +++.+.+.++..
T Consensus 83 ~~~~~~~G~~~~~~~G~~~-~~l~~~~~~~~~ 113 (118)
T 2f51_A 83 VKKEGNEIKTLDQFVGADV-SRIKADIEKFKH 113 (118)
T ss_dssp EEEETTEEEEEEEEESCCH-HHHHHHHHHHC-
T ss_pred EeCCCCcceEEEeecCCCH-HHHHHHHHHhhh
Confidence 9741 2788888999764 445555555543
No 58
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=98.99 E-value=4.9e-09 Score=80.79 Aligned_cols=97 Identities=14% Similarity=0.274 Sum_probs=75.2
Q ss_pred ccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEE
Q 020843 167 GSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVV 246 (320)
Q Consensus 167 gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Ii 246 (320)
.+|++++.. .++|+++|+|+++||..|+.+...+ +.+.+.++.++.++.++.+.. ..+++.|++..+|+++++
T Consensus 9 ~~~~~~l~~--~~~~~~vv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~v~~~Pt~~~~ 81 (106)
T 1xwb_A 9 ADLDGQLTK--ASGKLVVLDFFATWCGPCKMISPKL---VELSTQFADNVVVLKVDVDEC--EDIAMEYNISSMPTFVFL 81 (106)
T ss_dssp HHHHHHHHH--HTTSEEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTEEEEEEETTTC--HHHHHHTTCCSSSEEEEE
T ss_pred HHHHHHHHh--cCCCEEEEEEECCcCHHHHHhhHHH---HHHHHHhCCCeEEEEEeccch--HHHHHHcCCCcccEEEEE
Confidence 356666643 4789999999999999999997643 345555556799999998754 458889999999998877
Q ss_pred ecCCCceEEEEecCCChHHHHHHHHHH
Q 020843 247 DPITGQKMRSWCGMVQPESLLEDLVPF 273 (320)
Q Consensus 247 dp~tG~~v~~~~G~~~~~~fl~~L~~f 273 (320)
. .|+.+.++.| .+++.+.+.|.+.
T Consensus 82 ~--~G~~~~~~~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 82 K--NGVKVEEFAG-ANAKRLEDVIKAN 105 (106)
T ss_dssp E--TTEEEEEEES-CCHHHHHHHHHHT
T ss_pred c--CCcEEEEEcC-CCHHHHHHHHHHh
Confidence 4 5999989999 6888777666553
No 59
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=98.98 E-value=9.4e-10 Score=87.23 Aligned_cols=93 Identities=19% Similarity=0.254 Sum_probs=74.7
Q ss_pred HHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCCce
Q 020843 174 DAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQK 253 (320)
Q Consensus 174 ~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~ 253 (320)
+...+.+|+++|+|+++||..|+.+...+ +.+.+.+..++.|+.++.+.. ..+++.|++..+|+++|+. .|+.
T Consensus 24 ~~~~~~~~~~lv~f~~~~C~~C~~~~~~~---~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~i~~~Pt~~~~~--~g~~ 96 (121)
T 2i1u_A 24 TDVLSSNKPVLVDFWATWCGPCKMVAPVL---EEIATERATDLTVAKLDVDTN--PETARNFQVVSIPTLILFK--DGQP 96 (121)
T ss_dssp HHTTTCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTCEEEEEETTTC--HHHHHHTTCCSSSEEEEEE--TTEE
T ss_pred HHHHhCCCcEEEEEECCCCHHHHHHHHHH---HHHHHHhcCCeEEEEEECCCC--HHHHHhcCCCcCCEEEEEE--CCEE
Confidence 34446789999999999999999997654 455556666789999998754 4588899999999998885 6999
Q ss_pred EEEEecCCChHHHHHHHHHH
Q 020843 254 MRSWCGMVQPESLLEDLVPF 273 (320)
Q Consensus 254 v~~~~G~~~~~~fl~~L~~f 273 (320)
+.++.|..+.+++.+.|.+.
T Consensus 97 ~~~~~G~~~~~~l~~~l~~~ 116 (121)
T 2i1u_A 97 VKRIVGAKGKAALLRELSDV 116 (121)
T ss_dssp EEEEESCCCHHHHHHHTCSC
T ss_pred EEEecCCCCHHHHHHHHHHH
Confidence 88999999988777666543
No 60
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=98.98 E-value=5e-09 Score=81.38 Aligned_cols=93 Identities=13% Similarity=0.209 Sum_probs=76.7
Q ss_pred ccccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc------ceEEEEeecCChHHHHHHHHcCCC
Q 020843 165 FNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST------NFIFWQVYDDTSEGKKVCTYYKLD 238 (320)
Q Consensus 165 ~~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~------nFV~~q~d~~s~eg~~~~~~Y~v~ 238 (320)
...+|++++. +|+++|+|+++||..|+.+. +.+.++.++ ++.+..+|.+.. ..+++.|++.
T Consensus 11 ~~~~~~~~~~-----~~~~lv~f~~~~C~~C~~~~------~~~~~~~~~~~~~~~~~~~~~vd~~~~--~~l~~~~~v~ 77 (111)
T 3uvt_A 11 TENNFDDTIA-----EGITFIKFYAPWCGHCKTLA------PTWEELSKKEFPGLAGVKIAEVDCTAE--RNICSKYSVR 77 (111)
T ss_dssp CTTTHHHHHH-----SSEEEEEEECSSCHHHHHHH------HHHHHHHTCCCCC-CCEEEEEEETTTC--HHHHHHTTCC
T ss_pred ChhhHHHHhc-----CCcEEEEEECCCChhHHHhh------HHHHHHHHHhhccCCceEEEEEecccc--HhHHHhcCCC
Confidence 3468888776 78999999999999999995 566666654 578888887754 4588999999
Q ss_pred CCcEEEEEecCCCceEEEEecCCChHHHHHHHHH
Q 020843 239 SIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVP 272 (320)
Q Consensus 239 ~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~ 272 (320)
.+|+++++. .|+.+.++.|..+.+++.+.|.+
T Consensus 78 ~~Pt~~~~~--~g~~~~~~~g~~~~~~l~~~l~~ 109 (111)
T 3uvt_A 78 GYPTLLLFR--GGKKVSEHSGGRDLDSLHRFVLS 109 (111)
T ss_dssp SSSEEEEEE--TTEEEEEECSCCSHHHHHHHHHH
T ss_pred cccEEEEEe--CCcEEEeccCCcCHHHHHHHHHh
Confidence 999999884 58889899999999988887765
No 61
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=98.97 E-value=4.1e-09 Score=83.04 Aligned_cols=95 Identities=17% Similarity=0.240 Sum_probs=73.8
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEE
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLV 245 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~I 245 (320)
..+|+++++ ++|+++|+|+++||..|+.+...+ +.+.+... ++.|+.++.+.. ..+++.|++..+|+++|
T Consensus 16 ~~~f~~~~~----~~k~vlv~f~a~~C~~C~~~~~~l---~~l~~~~~-~v~~~~vd~~~~--~~~~~~~~v~~~Pt~~~ 85 (112)
T 1syr_A 16 QAEFDSIIS----QNELVIVDFFAEWCGPCKRIAPFY---EECSKTYT-KMVFIKVDVDEV--SEVTEKENITSMPTFKV 85 (112)
T ss_dssp HHHHHHHHH----HCSEEEEEEECTTCHHHHHHHHHH---HHHHHHCT-TSEEEEEETTTT--HHHHHHTTCCSSSEEEE
T ss_pred HHHHHHHHc----cCCeEEEEEECCCCHHHHHHHHHH---HHHHHHcC-CCEEEEEECCCC--HHHHHHcCCCcccEEEE
Confidence 457777763 799999999999999999997543 23333333 588999988754 36888999999999887
Q ss_pred EecCCCceEEEEecCCChHHHHHHHHHH
Q 020843 246 VDPITGQKMRSWCGMVQPESLLEDLVPF 273 (320)
Q Consensus 246 idp~tG~~v~~~~G~~~~~~fl~~L~~f 273 (320)
+. .|+.+.++.|. +++++.+.|.+.
T Consensus 86 ~~--~G~~~~~~~G~-~~~~l~~~l~~~ 110 (112)
T 1syr_A 86 YK--NGSSVDTLLGA-NDSALKQLIEKY 110 (112)
T ss_dssp EE--TTEEEEEEESC-CHHHHHHHHHTT
T ss_pred EE--CCcEEEEEeCC-CHHHHHHHHHHh
Confidence 74 69999899998 888877776654
No 62
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=98.96 E-value=5.8e-09 Score=81.23 Aligned_cols=98 Identities=9% Similarity=0.147 Sum_probs=73.7
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEE
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLV 245 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~I 245 (320)
..+|++++.. .++|+++|+|+++||..|+.+...+ +.+.+.. .++.|+.+|.+.. ..+++.|++..+|++++
T Consensus 9 ~~~~~~~~~~--~~~~~v~v~f~a~wC~~C~~~~~~~---~~~~~~~-~~~~~~~vd~~~~--~~~~~~~~v~~~Pt~~~ 80 (107)
T 1gh2_A 9 DPDFQPELSG--AGSRLAVVKFTMRGCGPCLRIAPAF---SSMSNKY-PQAVFLEVDVHQC--QGTAATNNISATPTFQF 80 (107)
T ss_dssp GGGHHHHHHH--TTTSCEEEEEECSSCHHHHHHHHHH---HHHHHHC-TTSEEEEEETTTS--HHHHHHTTCCSSSEEEE
T ss_pred HHHHHHHHHh--CCCCEEEEEEECCCChhhHHHHHHH---HHHHHHC-CCcEEEEEECccC--HHHHHhcCCCcccEEEE
Confidence 3577777654 5789999999999999999996533 2233323 3689999998753 45888999999999999
Q ss_pred EecCCCceEEEEecCCChHHHHHHHHHHH
Q 020843 246 VDPITGQKMRSWCGMVQPESLLEDLVPFM 274 (320)
Q Consensus 246 idp~tG~~v~~~~G~~~~~~fl~~L~~fl 274 (320)
+. .|+.+.++.|. .++++.+.|.+.+
T Consensus 81 ~~--~G~~~~~~~G~-~~~~l~~~l~~~l 106 (107)
T 1gh2_A 81 FR--NKVRIDQYQGA-DAVGLEEKIKQHL 106 (107)
T ss_dssp EE--TTEEEEEEESS-CHHHHHHHHHHHH
T ss_pred EE--CCeEEEEEeCC-CHHHHHHHHHHhc
Confidence 84 69999899995 4455666666554
No 63
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=98.96 E-value=4.9e-09 Score=85.13 Aligned_cols=98 Identities=12% Similarity=0.073 Sum_probs=76.4
Q ss_pred HHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCC-------------------------hHHH
Q 020843 175 AASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDT-------------------------SEGK 229 (320)
Q Consensus 175 ~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s-------------------------~eg~ 229 (320)
.+..++|+++|+|+++||..|+.+...+ ..+.+.+.+.+.++.++.+. ....
T Consensus 24 ~~~~~gk~~lv~f~~~~C~~C~~~~~~l---~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 100 (148)
T 2b5x_A 24 EQLIGEKPTLIHFWSISCHLCKEAMPQV---NEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDH 100 (148)
T ss_dssp HHHTTTSCEEEEEECTTCHHHHHHHHHH---HHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSC
T ss_pred hhhcCCCEEEEEEEcCCCHHHHHHhHHH---HHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCch
Confidence 3345789999999999999999886543 23444444447777777553 2234
Q ss_pred HHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 230 KVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 230 ~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
.+++.|++..+|+++|||+ .|+.+.++.|..+++++.+.|.+.+..
T Consensus 101 ~~~~~~~v~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~~l~~ 146 (148)
T 2b5x_A 101 ALTDAFENEYVPAYYVFDK-TGQLRHFQAGGSGMKMLEKRVNRVLAE 146 (148)
T ss_dssp HHHHHTCCCCSSEEEEECT-TCBEEEEEESCSTTHHHHHHHHHHHTT
T ss_pred hHHHHhCCCCCCEEEEECC-CCcEEEEecCCCCHHHHHHHHHHHHhc
Confidence 6788899999999999997 599999899999999999999988864
No 64
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.96 E-value=4.4e-09 Score=96.32 Aligned_cols=103 Identities=16% Similarity=0.215 Sum_probs=82.7
Q ss_pred ccccccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcE
Q 020843 163 LMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPV 242 (320)
Q Consensus 163 ~~~~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~ 242 (320)
.+...+|++.+ ....+|+++|+|+++||.+|+.+...+ +.+.+-...+++|+.+|++.. ..+++.|+|.++|+
T Consensus 11 ~~~~~~f~~~~--~~~~~~~v~v~f~a~wC~~C~~~~p~~---~~~~~~~~~~~~~~~vd~~~~--~~~~~~~~v~~~Pt 83 (287)
T 3qou_A 11 NINESNLQQVL--EQSMTTPVLFYFWSERSQHCLQLTPIL---ESLAAQYNGQFILAKLDCDAE--QMIAAQFGLRAIPT 83 (287)
T ss_dssp ECCTTTHHHHH--TTTTTSCEEEEEECTTCTTTTTTHHHH---HHHHHHHTSSSEEEEEETTTC--HHHHHTTTCCSSSE
T ss_pred ECCHHHHHHHH--HhcCCCeEEEEEECCCChHHHHHHHHH---HHHHHHcCCCeEEEEEeCccC--HHHHHHcCCCCCCe
Confidence 34456898855 344699999999999999999997543 455555566799999998764 46889999999999
Q ss_pred EEEEecCCCceEEEEecCCChHHHHHHHHHHH
Q 020843 243 VLVVDPITGQKMRSWCGMVQPESLLEDLVPFM 274 (320)
Q Consensus 243 i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fl 274 (320)
++|+. .|+.+.++.|..+.+.+...|...+
T Consensus 84 ~~~~~--~G~~~~~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 84 VYLFQ--NGQPVDGFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp EEEEE--TTEEEEEEESCCCHHHHHHHHHHHS
T ss_pred EEEEE--CCEEEEEeeCCCCHHHHHHHHHHHc
Confidence 99994 6999999999999888887777664
No 65
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=98.95 E-value=5.9e-09 Score=86.18 Aligned_cols=99 Identities=18% Similarity=0.117 Sum_probs=76.2
Q ss_pred HHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh----cceEEEEeecCCh----------------------HHH
Q 020843 176 ASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS----TNFIFWQVYDDTS----------------------EGK 229 (320)
Q Consensus 176 Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~----~nFV~~q~d~~s~----------------------eg~ 229 (320)
+.-++|++||+|+++||..|..+- +.+.++.+ .++.++.++.++. +..
T Consensus 20 ~~~~gk~vlv~F~a~wC~~C~~~~------~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (151)
T 3raz_A 20 QSLKAPVRIVNLWATWCGPCRKEM------PAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSR 93 (151)
T ss_dssp GGCCSSEEEEEEECTTCHHHHHHH------HHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHH
T ss_pred HHhCCCEEEEEEEcCcCHHHHHHH------HHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchH
Confidence 334789999999999999999885 34444443 4688888888743 245
Q ss_pred HHHHHcC--CCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 020843 230 KVCTYYK--LDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDGGPREQ 281 (320)
Q Consensus 230 ~~~~~Y~--v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~~~~d~ 281 (320)
.+++.|+ +..+|+++|||+ .|+.+.++.|..+++++.+.|.......+..+
T Consensus 94 ~~~~~~~~~v~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~l~~~~~~~~ 146 (151)
T 3raz_A 94 NFMKTYGNTVGVLPFTVVEAP-KCGYRQTITGEVNEKSLTDAVKLAHSKCREGH 146 (151)
T ss_dssp HHHHTTTCCSCCSSEEEEEET-TTTEEEECCSCCCHHHHHHHHHHHHTC-----
T ss_pred HHHHHhCCccCCCCEEEEECC-CCcEEEEECCCCCHHHHHHHHHHHHHHhhccc
Confidence 5777888 889999999998 59999999999999999999999887655543
No 66
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=98.94 E-value=5.8e-09 Score=82.67 Aligned_cols=94 Identities=16% Similarity=0.281 Sum_probs=74.4
Q ss_pred ccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc-ceEEEEeecCChHHHHHHHHcCCCCCcEEEE
Q 020843 167 GSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST-NFIFWQVYDDTSEGKKVCTYYKLDSIPVVLV 245 (320)
Q Consensus 167 gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~-nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~I 245 (320)
.+|++++.. ..+|+++|+|+++||..|+.+. +.+.++.++ ++.++.+|.+.. ..+++.|++..+|+++|
T Consensus 22 ~~~~~~l~~--~~~~~~vv~f~a~wC~~C~~~~------~~~~~~~~~~~~~~~~vd~~~~--~~~~~~~~v~~~Pt~~~ 91 (117)
T 2xc2_A 22 GDLESLLEQ--HKNKLVVVDFFATWCGPCKTIA------PLFKELSEKYDAIFVKVDVDKL--EETARKYNISAMPTFIA 91 (117)
T ss_dssp THHHHHHHH--TTTSCEEEEEECTTCHHHHHHH------HHHHHHHTTSSSEEEEEETTTS--HHHHHHTTCCSSSEEEE
T ss_pred HHHHHHHHh--CCCCEEEEEEECCCCHhHHHHh------HHHHHHHHHcCcEEEEEECCcc--HHHHHHcCCCccceEEE
Confidence 577777653 4789999999999999999996 445555555 688888887653 45888999999999888
Q ss_pred EecCCCceEEEEecCCChHHHHHHHHHH
Q 020843 246 VDPITGQKMRSWCGMVQPESLLEDLVPF 273 (320)
Q Consensus 246 idp~tG~~v~~~~G~~~~~~fl~~L~~f 273 (320)
+. .|+.+.++.| .+++++.+.|.+.
T Consensus 92 ~~--~G~~~~~~~G-~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 92 IK--NGEKVGDVVG-ASIAKVEDMIKKF 116 (117)
T ss_dssp EE--TTEEEEEEES-SCHHHHHHHHHHH
T ss_pred Ee--CCcEEEEEeC-CCHHHHHHHHHHh
Confidence 73 6999989999 5788777776654
No 67
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=98.94 E-value=1.4e-09 Score=91.43 Aligned_cols=100 Identities=17% Similarity=0.259 Sum_probs=76.7
Q ss_pred cHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEe
Q 020843 168 SFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVD 247 (320)
Q Consensus 168 sf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iid 247 (320)
.|++++. .+++|++||+|+++||.+|+.+...+ +.+.+-+...+.++.+|++.. ..+++.|++..+|+++| .
T Consensus 13 ~~~~~i~--~~~~k~vlv~F~a~WC~~C~~~~p~l---~~l~~~~~~~~~~~~vd~d~~--~~l~~~~~v~~~Pt~~~-~ 84 (149)
T 3gix_A 13 EVDQAIK--STAEKVLVLRFGRDEDPVCLQLDDIL---SKTSSDLSKMAAIYLVDVDQT--AVYTQYFDISYIPSTVF-F 84 (149)
T ss_dssp HHHHHHH--HCCSSEEEEEEECTTSHHHHHHHHHH---HHHHTTTTTTEEEEEEETTTC--CHHHHHTTCCSSSEEEE-E
T ss_pred HHHHHHH--hcCCCEEEEEEECCCCHHHHHHHHHH---HHHHHHccCceEEEEEECCcC--HHHHHHcCCCccCeEEE-E
Confidence 4555543 25799999999999999999996432 233333344599999998654 35889999999999994 4
Q ss_pred cCCCceE---------EEEec-CCChHHHHHHHHHHHhc
Q 020843 248 PITGQKM---------RSWCG-MVQPESLLEDLVPFMDG 276 (320)
Q Consensus 248 p~tG~~v---------~~~~G-~~~~~~fl~~L~~fld~ 276 (320)
+ .|+.+ .++.| ..+.++|.+.|...+..
T Consensus 85 ~-~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~~~ 122 (149)
T 3gix_A 85 F-NGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYRG 122 (149)
T ss_dssp E-TTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHHHH
T ss_pred E-CCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHHHH
Confidence 3 59888 78899 88999999998888753
No 68
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=98.93 E-value=4.4e-09 Score=84.37 Aligned_cols=96 Identities=19% Similarity=0.291 Sum_probs=74.6
Q ss_pred ccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc-ceEEEEeecCChHHHHHHHHcCCCCCcEEEE
Q 020843 167 GSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST-NFIFWQVYDDTSEGKKVCTYYKLDSIPVVLV 245 (320)
Q Consensus 167 gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~-nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~I 245 (320)
.+|++++ +.+|+++|+|+++||..|+.+...+ +.+.+.+.. ++.++.++.+.. ..+++.|++..+|+++|
T Consensus 24 ~~f~~~l----~~~k~vvv~f~a~~C~~C~~~~~~l---~~l~~~~~~~~v~~~~vd~d~~--~~~~~~~~v~~~Pt~~~ 94 (121)
T 2j23_A 24 DQFKQVT----GGDKVVVIDFWATWCGPCKMIGPVF---EKISDTPAGDKVGFYKVDVDEQ--SQIAQEVGIRAMPTFVF 94 (121)
T ss_dssp HHHHHHH----SSSSCEEEEEECTTCSTHHHHHHHH---HHHHTSTHHHHSEEEEEETTTC--HHHHHHHTCCSSSEEEE
T ss_pred HHHHHHH----cCCCEEEEEEECCCCHhHHHHHHHH---HHHHHHCcCCcEEEEEEECcCC--HHHHHHcCCCcccEEEE
Confidence 3555555 7899999999999999999997543 333333333 388999988764 35888999999999998
Q ss_pred EecCCCceEEEEecCCChHHHHHHHHHHH
Q 020843 246 VDPITGQKMRSWCGMVQPESLLEDLVPFM 274 (320)
Q Consensus 246 idp~tG~~v~~~~G~~~~~~fl~~L~~fl 274 (320)
+. .|+.+.++.|. +++++.+.|.+.+
T Consensus 95 ~~--~G~~~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 95 FK--NGQKIDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp EE--TTEEEEEEESS-CHHHHHHHHHHHT
T ss_pred EE--CCeEEeeEcCC-CHHHHHHHHHHhh
Confidence 85 69999889998 8888888777654
No 69
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=98.93 E-value=8.2e-09 Score=86.41 Aligned_cols=97 Identities=16% Similarity=0.266 Sum_probs=76.3
Q ss_pred ccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh--cceEEEEeecCChHHHHHHHHcCCCCCcEEE
Q 020843 167 GSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS--TNFIFWQVYDDTSEGKKVCTYYKLDSIPVVL 244 (320)
Q Consensus 167 gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~--~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~ 244 (320)
..|++++..+ .+|++||+|+++||..|+.+.. .+.++.+ .++.|+.+|.+.. ..+++.|++..+|+++
T Consensus 21 ~~~~~~~~~~--~~~~vvv~F~a~wC~~C~~~~p------~l~~l~~~~~~v~~~~vd~~~~--~~l~~~~~v~~~Pt~~ 90 (153)
T 2wz9_A 21 GQFEELLRLK--AKSLLVVHFWAPWAPQCAQMNE------VMAELAKELPQVSFVKLEAEGV--PEVSEKYEISSVPTFL 90 (153)
T ss_dssp HHHHHHHHHT--TTSCEEEEEECTTCHHHHHHHH------HHHHHHHHCTTSEEEEEETTTS--HHHHHHTTCCSSSEEE
T ss_pred HHHHHHHHhc--CCCeEEEEEECCCCHhHHHHHH------HHHHHHHHcCCeEEEEEECCCC--HHHHHHcCCCCCCEEE
Confidence 4566665433 4899999999999999999964 3444443 3689999998764 4588899999999999
Q ss_pred EEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 245 VVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 245 Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
|++ .|+.+.++.|. .++++.+.|.+.+..
T Consensus 91 ~~~--~G~~~~~~~G~-~~~~l~~~i~~~l~~ 119 (153)
T 2wz9_A 91 FFK--NSQKIDRLDGA-HAPELTKKVQRHASS 119 (153)
T ss_dssp EEE--TTEEEEEEESS-CHHHHHHHHHHHSCT
T ss_pred EEE--CCEEEEEEeCC-CHHHHHHHHHHHhcc
Confidence 999 59999888995 778888888777654
No 70
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=98.92 E-value=9.4e-09 Score=81.92 Aligned_cols=91 Identities=15% Similarity=0.183 Sum_probs=68.2
Q ss_pred HHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCC
Q 020843 172 AKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITG 251 (320)
Q Consensus 172 A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG 251 (320)
.++.+.+++|+++|+|+++||..|+.+...+ +.+.+.+. ++.|+.+|.+.. ..+++.|++..+|+++|+ + .|
T Consensus 22 ~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l---~~~~~~~~-~v~~~~vd~~~~--~~l~~~~~v~~~Pt~~~~-~-~G 93 (114)
T 2oe3_A 22 EFRNLIKQNDKLVIDFYATWCGPCKMMQPHL---TKLIQAYP-DVRFVKCDVDES--PDIAKECEVTAMPTFVLG-K-DG 93 (114)
T ss_dssp HHHHHHHHCSEEEEEEECTTCHHHHHTHHHH---HHHHHHCT-TSEEEEEETTTC--HHHHHHTTCCSBSEEEEE-E-TT
T ss_pred HHHHHHhCCCEEEEEEECCCCHHHHHHHHHH---HHHHHHCC-CCEEEEEECCCC--HHHHHHCCCCcccEEEEE-e-CC
Confidence 3444556799999999999999999996432 22333333 378888888754 358889999999999876 3 69
Q ss_pred ceEEEEecCCChHHHHHHHH
Q 020843 252 QKMRSWCGMVQPESLLEDLV 271 (320)
Q Consensus 252 ~~v~~~~G~~~~~~fl~~L~ 271 (320)
+.+.++.|.. ++++.+.|.
T Consensus 94 ~~~~~~~G~~-~~~l~~~l~ 112 (114)
T 2oe3_A 94 QLIGKIIGAN-PTALEKGIK 112 (114)
T ss_dssp EEEEEEESSC-HHHHHHHHH
T ss_pred eEEEEEeCCC-HHHHHHHHH
Confidence 9999999987 776665554
No 71
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=98.92 E-value=8.8e-09 Score=84.45 Aligned_cols=98 Identities=16% Similarity=0.280 Sum_probs=74.7
Q ss_pred ccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEE
Q 020843 167 GSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVV 246 (320)
Q Consensus 167 gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Ii 246 (320)
.+|++++. +.++ ++|+|+++||..|+.+...+ +.+.+.+..++.|+.++.+.. ..+++.|++..+|+++|+
T Consensus 41 ~~~~~~~~---~~~~-vvv~f~~~~C~~C~~~~~~l---~~l~~~~~~~v~~~~vd~~~~--~~l~~~~~v~~~Pt~~~~ 111 (140)
T 1v98_A 41 KGFAQEVA---GAPL-TLVDFFAPWCGPCRLVSPIL---EELARDHAGRLKVVKVNVDEH--PGLAARYGVRSVPTLVLF 111 (140)
T ss_dssp -----------CCCE-EEEEEECTTCHHHHHHHHHH---HHHHHHTTTTEEEEEEETTTC--HHHHHHTTCCSSSEEEEE
T ss_pred HHHHHHHH---cCCC-EEEEEECCCCHHHHHHHHHH---HHHHHHccCceEEEEEECCCC--HHHHHHCCCCccCEEEEE
Confidence 45554443 4456 99999999999999997654 455555666799999998764 458889999999999999
Q ss_pred ecCCCceEEEEecCCChHHHHHHHHHHHh
Q 020843 247 DPITGQKMRSWCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 247 dp~tG~~v~~~~G~~~~~~fl~~L~~fld 275 (320)
. .|+.+.++.|..+.+++.+.|.+.++
T Consensus 112 ~--~G~~~~~~~G~~~~~~l~~~i~~~l~ 138 (140)
T 1v98_A 112 R--RGAPVATWVGASPRRVLEERLRPYLE 138 (140)
T ss_dssp E--TTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred e--CCcEEEEEeCCCCHHHHHHHHHHHHc
Confidence 4 69999999999999999999888875
No 72
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=98.91 E-value=1e-08 Score=84.22 Aligned_cols=99 Identities=10% Similarity=0.146 Sum_probs=76.7
Q ss_pred hcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh-cceEEEEeecCChHH---------------------HHHHHHc
Q 020843 178 VQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS-TNFIFWQVYDDTSEG---------------------KKVCTYY 235 (320)
Q Consensus 178 ~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~-~nFV~~q~d~~s~eg---------------------~~~~~~Y 235 (320)
-.+|++||+|+++||..|..+...+ ..+.+.+. .++.++.++.+.... ..+++.|
T Consensus 28 ~~gk~~lv~f~~~~C~~C~~~~~~l---~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 104 (152)
T 2lja_A 28 LKGKYIYIDVWATWCGPCRGELPAL---KELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAY 104 (152)
T ss_dssp TTTSEEEEEECCSSCCGGGGTHHHH---HHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHT
T ss_pred cCCCEEEEEEECCcCHhHHHHhHHH---HHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHc
Confidence 3589999999999999998875432 12333333 358888888776431 2678889
Q ss_pred CCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 020843 236 KLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDGGPRE 280 (320)
Q Consensus 236 ~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~~~~d 280 (320)
++..+|+++|||+ .|+.+.++.|..+++++.+.|...+.....-
T Consensus 105 ~v~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~~~~~~~~~ 148 (152)
T 2lja_A 105 LINGIPRFILLDR-DGKIISANMTRPSDPKTAEKFNELLGLEGHH 148 (152)
T ss_dssp TCCSSCCEEEECT-TSCEEESSCCCTTCHHHHHHHHHHHTCCSSS
T ss_pred CcCCCCEEEEECC-CCeEEEccCCCCCHHHHHHHHHHHhcccccc
Confidence 9999999999998 5999888889899999999999998875543
No 73
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=98.90 E-value=8.5e-09 Score=90.77 Aligned_cols=101 Identities=16% Similarity=0.191 Sum_probs=83.0
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEE
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLV 245 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~I 245 (320)
..+|+.++ ..+|++||+|+++||..|+.+...+ +.+.+.++.++.|+.++.+.. ..+++.|++..+|+++|
T Consensus 104 ~~~f~~~~----~~~~~vlv~F~a~wC~~C~~~~p~~---~~l~~~~~~~v~~~~vd~~~~--~~l~~~~~v~~~Pt~~~ 174 (210)
T 3apq_A 104 RREFDAAV----NSGELWFVNFYSPGCSHCHDLAPTW---REFAKEVDGLLRIGAVNCGDD--RMLCRMKGVNSYPSLFI 174 (210)
T ss_dssp HHHHHHHH----HHSCCEEEEEECTTCHHHHHHHHHH---HHHHHHTBTTBEEEEEETTTC--HHHHHHTTCCSSSEEEE
T ss_pred HHHHHHHH----ccCCcEEEEEeCCCChhHHHHHHHH---HHHHHHhcCceEEEEEECCcc--HHHHHHcCCCcCCeEEE
Confidence 34666655 6789999999999999999997644 456666666799999998754 46889999999999999
Q ss_pred EecCCCceEEEEecCCChHHHHHHHHHHHhcC
Q 020843 246 VDPITGQKMRSWCGMVQPESLLEDLVPFMDGG 277 (320)
Q Consensus 246 idp~tG~~v~~~~G~~~~~~fl~~L~~fld~~ 277 (320)
+ + .|+.+.++.|..+.+++.+.|.+.+...
T Consensus 175 ~-~-~G~~~~~~~G~~~~~~l~~~i~~~l~~~ 204 (210)
T 3apq_A 175 F-R-SGMAAVKYNGDRSKESLVAFAMQHVRST 204 (210)
T ss_dssp E-C-TTSCCEECCSCCCHHHHHHHHHHHHHCC
T ss_pred E-E-CCCceeEecCCCCHHHHHHHHHHhCccc
Confidence 9 3 6888888999999999999999888653
No 74
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=98.90 E-value=5.9e-09 Score=85.47 Aligned_cols=100 Identities=10% Similarity=0.044 Sum_probs=76.6
Q ss_pred ccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc-ceEEEEeecCC-------hHHHHHHHHcCCC
Q 020843 167 GSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST-NFIFWQVYDDT-------SEGKKVCTYYKLD 238 (320)
Q Consensus 167 gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~-nFV~~q~d~~s-------~eg~~~~~~Y~v~ 238 (320)
.+|++++.. +++|+|+++||.+|+.+. |.+.++.++ .+.|+.++.++ .+...+++.|++.
T Consensus 24 ~~~~~~~~~------~vlv~F~a~wC~~C~~~~------p~l~~l~~~~~v~~~~vd~~~~~~~~~~d~~~~l~~~~~v~ 91 (135)
T 3emx_A 24 EEFRQLLQG------DAILAVYSKTCPHCHRDW------PQLIQASKEVDVPIVMFIWGSLIGERELSAARLEMNKAGVE 91 (135)
T ss_dssp HHHHHHHTS------SEEEEEEETTCHHHHHHH------HHHHHHHTTCCSCEEEEEECTTCCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHhCC------cEEEEEECCcCHhhhHhC------hhHHHHHHHCCCEEEEEECCCchhhhhhhhhHHHHHHcCCc
Confidence 456655432 999999999999999995 566666654 37788888754 4678899999999
Q ss_pred CCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 020843 239 SIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDGGPRE 280 (320)
Q Consensus 239 ~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~~~~d 280 (320)
.+|+++|++ .|+.+.++.|..+.+.+.+.+...++....+
T Consensus 92 ~~Pt~~~~~--~G~~v~~~~G~~~~~~~~~~i~~~~~~~~~~ 131 (135)
T 3emx_A 92 GTPTLVFYK--EGRIVDKLVGATPWSLKVEKAREIYGGEGHH 131 (135)
T ss_dssp SSSEEEEEE--TTEEEEEEESCCCHHHHHHHHHHHC------
T ss_pred eeCeEEEEc--CCEEEEEEeCCCCHHHHHHHHHHHhCCCccc
Confidence 999999998 5999999999999998888888887764443
No 75
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=98.89 E-value=2.1e-08 Score=76.85 Aligned_cols=94 Identities=14% Similarity=0.264 Sum_probs=72.5
Q ss_pred ccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc--ceEEEEeecCChHHHHHHHHcCCCCCcEEE
Q 020843 167 GSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST--NFIFWQVYDDTSEGKKVCTYYKLDSIPVVL 244 (320)
Q Consensus 167 gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~--nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~ 244 (320)
..|++++.. ..+|+++|+|+++||..|+.+... +.++.++ ++.++.++.+.. ..+++.|++..+|+++
T Consensus 8 ~~~~~~l~~--~~~~~~~v~f~~~~C~~C~~~~~~------l~~~~~~~~~~~~~~v~~~~~--~~~~~~~~v~~~Pt~~ 77 (104)
T 2vim_A 8 ADLEKLINE--NKGRLIVVDFFAQWCGPCRNIAPK------VEALAKEIPEVEFAKVDVDQN--EEAAAKYSVTAMPTFV 77 (104)
T ss_dssp HHHHHHHHT--TTTSCEEEEEECTTCHHHHHHHHH------HHHHHHHCTTSEEEEEETTTC--HHHHHHTTCCSSSEEE
T ss_pred HHHHHHHHh--cCCCeEEEEEECCCCHHHHHhhHH------HHHHHHHCCCCEEEEEeccCC--HHHHHHcCCccccEEE
Confidence 346665532 378999999999999999999753 3444432 688999988754 4588899999999988
Q ss_pred EEecCCCceEEEEecCCChHHHHHHHHHH
Q 020843 245 VVDPITGQKMRSWCGMVQPESLLEDLVPF 273 (320)
Q Consensus 245 Iidp~tG~~v~~~~G~~~~~~fl~~L~~f 273 (320)
++. .|+.+.++.| .+++++.+.|.+.
T Consensus 78 ~~~--~g~~~~~~~G-~~~~~l~~~l~~~ 103 (104)
T 2vim_A 78 FIK--DGKEVDRFSG-ANETKLRETITRH 103 (104)
T ss_dssp EEE--TTEEEEEEES-SCHHHHHHHHHHH
T ss_pred EEe--CCcEEEEEeC-CCHHHHHHHHHhh
Confidence 885 6999989999 5888877777654
No 76
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=98.89 E-value=1e-08 Score=84.42 Aligned_cols=95 Identities=13% Similarity=0.176 Sum_probs=74.6
Q ss_pred hcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh-cceEEEEeecCChH--------------------HHHHHHHcC
Q 020843 178 VQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS-TNFIFWQVYDDTSE--------------------GKKVCTYYK 236 (320)
Q Consensus 178 ~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~-~nFV~~q~d~~s~e--------------------g~~~~~~Y~ 236 (320)
-++|++||+|+++||..|+.+...+ ..+.+.+. .++.++.++.+... ...+++.|+
T Consensus 24 ~~gk~vlv~F~~~~C~~C~~~~~~l---~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 100 (151)
T 2f9s_A 24 LKGKGVFLNFWGTWCEPCKKEFPYM---ANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYD 100 (151)
T ss_dssp GTTSEEEEEEECTTCHHHHHHHHHH---HHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTT
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHH---HHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcC
Confidence 4689999999999999999886443 22333333 36888888775432 236788899
Q ss_pred CCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 237 LDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 237 v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
+..+|+++|||+ .|+.+..+.|..+++++.+.|...+..
T Consensus 101 v~~~P~~~lid~-~G~i~~~~~G~~~~~~l~~~l~~ll~~ 139 (151)
T 2f9s_A 101 VSPLPTTFLINP-EGKVVKVVTGTMTESMIHDYMNLIKPG 139 (151)
T ss_dssp CCSSCEEEEECT-TSEEEEEEESCCCHHHHHHHHHHHSCC
T ss_pred CCCCCeEEEECC-CCcEEEEEeCCCCHHHHHHHHHHHHhh
Confidence 999999999997 699999999999999999999988765
No 77
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=98.89 E-value=8e-09 Score=81.47 Aligned_cols=95 Identities=7% Similarity=0.130 Sum_probs=73.0
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc--ceEEEEeecCChHHHHHHHHcCCCCCcEE
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST--NFIFWQVYDDTSEGKKVCTYYKLDSIPVV 243 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~--nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i 243 (320)
..+| +++ .++|+++|+|+++||..|+.+.. .+.++.++ ++.++.+|.+. ...+++.|++..+|++
T Consensus 10 ~~~f-~~~----~~~~~~vv~f~a~wC~~C~~~~~------~l~~~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~ 76 (110)
T 2l6c_A 10 EAGM-AHF----EGLSDAIVFFHKNLCPHCKNMEK------VLDKFGARAPQVAISSVDSEA--RPELMKELGFERVPTL 76 (110)
T ss_dssp GCSH-HHH----TTCSEEEEEEECSSCSTHHHHHH------HHHHHHTTCTTSCEEEEEGGG--CHHHHHHTTCCSSCEE
T ss_pred HHHH-HHH----HcCCCEEEEEECCCCHhHHHHHH------HHHHHHHHCCCcEEEEEcCcC--CHHHHHHcCCcccCEE
Confidence 3566 443 46799999999999999999953 44554443 47788887753 3568889999999999
Q ss_pred EEEecCCCceEEEEecCCChHHHHHHHHHHHh
Q 020843 244 LVVDPITGQKMRSWCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 244 ~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld 275 (320)
+|+ + .|+.+.++.|..++++|...|..+..
T Consensus 77 ~~~-~-~G~~v~~~~G~~~~~~l~~~~~~~~~ 106 (110)
T 2l6c_A 77 VFI-R-DGKVAKVFSGIMNPRELQALYASIHH 106 (110)
T ss_dssp EEE-E-SSSEEEEEESCCCHHHHHHHHHTC--
T ss_pred EEE-E-CCEEEEEEcCCCCHHHHHHHHHHHhh
Confidence 999 3 69999999999999988877776554
No 78
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=98.88 E-value=8e-09 Score=82.46 Aligned_cols=90 Identities=14% Similarity=0.118 Sum_probs=70.9
Q ss_pred hcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc--ceEEEEeecCC---------------------hHHHHHHHH
Q 020843 178 VQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST--NFIFWQVYDDT---------------------SEGKKVCTY 234 (320)
Q Consensus 178 ~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~--nFV~~q~d~~s---------------------~eg~~~~~~ 234 (320)
..+|+++|+|+++||..|+.+.. .+.++.++ ++.++.++.++ .....+++.
T Consensus 23 ~~~k~~ll~f~~~~C~~C~~~~~------~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 96 (136)
T 1zzo_A 23 LLGKPAVLWFWAPWCPTCQGEAP------VVGQVAASHPEVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWAN 96 (136)
T ss_dssp GTTSCEEEEEECTTCHHHHHHHH------HHHHHHHHCTTSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHH
T ss_pred hCCCeEEEEEEcCCChhHHHHHH------HHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHH
Confidence 46899999999999999998853 34444333 67888887654 223467788
Q ss_pred cCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHh
Q 020843 235 YKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 235 Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld 275 (320)
|++..+|+++|||+ .|+.+ ++.|..+.+++.+.|.+.+.
T Consensus 97 ~~i~~~P~~~~id~-~g~i~-~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 97 FGVTQQPAYAFVDP-HGNVD-VVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp TTCCSSSEEEEECT-TCCEE-EEESCCCHHHHHHHHHHHC-
T ss_pred cCCCCCceEEEECC-CCCEE-EEecCCCHHHHHHHHHHHhc
Confidence 99999999999997 58888 88999999999998887764
No 79
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.87 E-value=7.4e-09 Score=83.01 Aligned_cols=90 Identities=11% Similarity=0.077 Sum_probs=70.5
Q ss_pred HhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc--ceEEEEeecCCh--------------------HHHHHHHH
Q 020843 177 SVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST--NFIFWQVYDDTS--------------------EGKKVCTY 234 (320)
Q Consensus 177 k~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~--nFV~~q~d~~s~--------------------eg~~~~~~ 234 (320)
..++|+++|+|+++||..|+.+.. .+.++.++ ++.++.++.++. ....+++.
T Consensus 21 ~~~~k~~lv~f~~~~C~~C~~~~~------~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 94 (136)
T 1lu4_A 21 SLQGKPAVLWFWTPWCPFCNAEAP------SLSQVAAANPAVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWAR 94 (136)
T ss_dssp GGTTSCEEEEEECTTCHHHHHHHH------HHHHHHHHCTTSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHH
T ss_pred HhCCCEEEEEEECCcChhHHHHHH------HHHHHHHHCCCcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHh
Confidence 346899999999999999998854 34444433 688888887651 13457778
Q ss_pred cCCCCCcEEEEEecCCCceEEEEe---cCCChHHHHHHHHHHH
Q 020843 235 YKLDSIPVVLVVDPITGQKMRSWC---GMVQPESLLEDLVPFM 274 (320)
Q Consensus 235 Y~v~~~P~i~Iidp~tG~~v~~~~---G~~~~~~fl~~L~~fl 274 (320)
|++..+|+++|||+ .|+.+ ++. |..+++++.+.|.+.+
T Consensus 95 ~~i~~~P~~~lid~-~G~i~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 95 YNVPWQPAFVFYRA-DGTST-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp TTCCSSSEEEEECT-TSCEE-EECCSSSCCCHHHHHHHHHHC-
T ss_pred cCCCCCCEEEEECC-CCcEE-EEEcCCCccCHHHHHHHHHHHh
Confidence 99999999999997 58888 888 9999999988887754
No 80
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=98.87 E-value=5.9e-09 Score=85.46 Aligned_cols=97 Identities=9% Similarity=0.142 Sum_probs=73.7
Q ss_pred ccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc-ceEEEEeecCChHHHHHHHHcCCCCCcEEEE
Q 020843 167 GSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST-NFIFWQVYDDTSEGKKVCTYYKLDSIPVVLV 245 (320)
Q Consensus 167 gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~-nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~I 245 (320)
..|++++. ...+|++||+|+++||..|+.+. +.+.++.++ +++|+.+|.+.. ..+++.|++..+|+++|
T Consensus 29 ~~~~~~l~--~~~~k~vvv~F~a~wC~~C~~~~------p~l~~l~~~~~v~~~~vd~~~~--~~l~~~~~v~~~Pt~~~ 98 (133)
T 3cxg_A 29 GSLNQVFS--STQNSSIVIKFGAVWCKPCNKIK------EYFKNQLNYYYVTLVDIDVDIH--PKLNDQHNIKALPTFEF 98 (133)
T ss_dssp THHHHHHT--C-CCSEEEEEEECTTCHHHHHTH------HHHHGGGGTEECEEEEEETTTC--HHHHHHTTCCSSSEEEE
T ss_pred hHHHHHHH--hcCCCEEEEEEECCCCHHHHHHH------HHHHHHHHhcCEEEEEEeccch--HHHHHhcCCCCCCEEEE
Confidence 46766663 34589999999999999999984 344444443 468888887653 46888999999999999
Q ss_pred E-ecCCCc--eEEEEecCCChHHHHHHHHHHHh
Q 020843 246 V-DPITGQ--KMRSWCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 246 i-dp~tG~--~v~~~~G~~~~~~fl~~L~~fld 275 (320)
+ ++ .|+ .+.++.|. +++++.+.|.+.+.
T Consensus 99 ~~~~-~g~g~~~~~~~G~-~~~~l~~~l~~~l~ 129 (133)
T 3cxg_A 99 YFNL-NNEWVLVHTVEGA-NQNDIEKAFQKYCL 129 (133)
T ss_dssp EEEE-TTEEEEEEEEESC-CHHHHHHHHHHHSE
T ss_pred EEec-CCCeEEEEEEcCC-CHHHHHHHHHHHHH
Confidence 9 43 466 78888997 88888888887764
No 81
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.86 E-value=2.6e-09 Score=88.01 Aligned_cols=94 Identities=18% Similarity=0.245 Sum_probs=73.9
Q ss_pred HHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc-ceEEEEeecCCh---------------------HHHHHHH
Q 020843 176 ASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST-NFIFWQVYDDTS---------------------EGKKVCT 233 (320)
Q Consensus 176 Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~-nFV~~q~d~~s~---------------------eg~~~~~ 233 (320)
+.-.+|+++|+|+++||..|+.+. +.+.++.++ ++.++.++.++. ....+++
T Consensus 38 ~~~~gk~~ll~f~~~~C~~C~~~~------~~l~~l~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (156)
T 1kng_A 38 AAFKGKVSLVNVWASWCVPCHDEA------PLLTELGKDKRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASI 111 (156)
T ss_dssp GGGTTSCEEEEEECTTCHHHHHHH------HHHHHHTTCTTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHH
T ss_pred HHhCCCEEEEEEEcccCHhHHHHH------HHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHH
Confidence 344589999999999999998874 455666554 477777775432 1235777
Q ss_pred HcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 234 YYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 234 ~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
.|++..+|+++|||+ .|+.+.++.|..+.+++.+.|.+.+++
T Consensus 112 ~~~v~~~P~~~~id~-~G~i~~~~~g~~~~~~l~~~l~~~l~~ 153 (156)
T 1kng_A 112 EWGVYGVPETFVVGR-EGTIVYKLVGPITPDNLRSVLLPQMEK 153 (156)
T ss_dssp HTTCCSSCEEEEECT-TSBEEEEEESCCCHHHHHHTHHHHHHH
T ss_pred hcCcCccCeEEEEcC-CCCEEEEEeCCCCHHHHHHHHHHHHHH
Confidence 899999999999997 599998999999999998888887754
No 82
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=98.86 E-value=1.8e-08 Score=80.01 Aligned_cols=86 Identities=7% Similarity=0.064 Sum_probs=64.9
Q ss_pred HhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh---cceEEEEeecCC--hHHHHHHHHcCCCCCcEEEEEecCCC
Q 020843 177 SVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS---TNFIFWQVYDDT--SEGKKVCTYYKLDSIPVVLVVDPITG 251 (320)
Q Consensus 177 k~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~---~nFV~~q~d~~s--~eg~~~~~~Y~v~~~P~i~Iidp~tG 251 (320)
.+.+|+++|+|+++||..|+.+.. .+.++.+ ..++++.++... .+...+++.|++..+|+++++. .|
T Consensus 26 ~~~~~~~~v~f~a~wC~~C~~~~p------~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~Pt~~~~~--~G 97 (118)
T 1zma_A 26 LDKKETATFFIGRKTCPYCRKFAG------TLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGIPTVPGFVHIT--DG 97 (118)
T ss_dssp HHTTCCEEEEEECTTCHHHHHHHH------HHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTCCSSCEEEEEE--TT
T ss_pred HhCCCeEEEEEECCCCccHHHHHH------HHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCCCCCCeEEEEE--CC
Confidence 456899999999999999999964 4444443 345555443222 3456788999999999999995 59
Q ss_pred ceEEEEecCCChHHHHHHH
Q 020843 252 QKMRSWCGMVQPESLLEDL 270 (320)
Q Consensus 252 ~~v~~~~G~~~~~~fl~~L 270 (320)
+.+.++.|..+++++.+.|
T Consensus 98 ~~~~~~~G~~~~~~l~~~l 116 (118)
T 1zma_A 98 QINVRCDSSMSAQEIKDFA 116 (118)
T ss_dssp EEEEECCTTCCHHHHHHHH
T ss_pred EEEEEecCCCCHHHHHHHh
Confidence 8888889999988776655
No 83
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=98.86 E-value=2e-08 Score=80.19 Aligned_cols=99 Identities=13% Similarity=0.157 Sum_probs=74.4
Q ss_pred cccccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc--ceEEEEeecCChHHHHHHHHcCCCCCc
Q 020843 164 MFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST--NFIFWQVYDDTSEGKKVCTYYKLDSIP 241 (320)
Q Consensus 164 ~~~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~--nFV~~q~d~~s~eg~~~~~~Y~v~~~P 241 (320)
+...+|++.+.. .++|+++|+|+++||..|+.+... +.++.++ ++.++.+|.+. +...+++.|++..+|
T Consensus 23 l~~~~~~~~~~~--~~~~~~vv~f~a~wC~~C~~~~~~------l~~~~~~~~~~~~~~vd~~~-~~~~~~~~~~v~~~P 93 (124)
T 1faa_A 23 VNKDTFWPIVKA--AGDKPVVLDMFTQWCGPCKAMAPK------YEKLAEEYLDVIFLKLDCNQ-ENKTLAKELGIRVVP 93 (124)
T ss_dssp ECTTTHHHHHHH--TTTSCEEEEEECTTCHHHHHHHHH------HHHHHHHCTTSEEEEEECSS-TTHHHHHHHCCSSSS
T ss_pred ecchhHHHHHHh--cCCCEEEEEEECCcCHhHHHHhHH------HHHHHHHCCCCEEEEEecCc-chHHHHHHcCCCeee
Confidence 344678877663 478999999999999999999754 3444332 48888888863 235688899999999
Q ss_pred EEEEEecCCCceEEEEecCCChHHHHHHHHHHH
Q 020843 242 VVLVVDPITGQKMRSWCGMVQPESLLEDLVPFM 274 (320)
Q Consensus 242 ~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fl 274 (320)
+++|+ + .|+.+.++.|.. ++++.+.|.+.+
T Consensus 94 t~~~~-~-~G~~~~~~~G~~-~~~l~~~i~~~~ 123 (124)
T 1faa_A 94 TFKIL-K-ENSVVGEVTGAK-YDKLLEAIQAAR 123 (124)
T ss_dssp EEEEE-E-TTEEEEEEESSC-HHHHHHHHHHHT
T ss_pred EEEEE-e-CCcEEEEEcCCC-HHHHHHHHHHhh
Confidence 97665 3 599998889975 777777776543
No 84
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=98.85 E-value=9.5e-10 Score=88.28 Aligned_cols=100 Identities=15% Similarity=0.299 Sum_probs=80.5
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc--ceEEEEeecCChHHHHHHHHcCCCCCcEE
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST--NFIFWQVYDDTSEGKKVCTYYKLDSIPVV 243 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~--nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i 243 (320)
..+|++++..++..+|+++|+|+++||..|+.+.. .+.++.++ ++.|+.++.+.. ..+++.|++..+|++
T Consensus 22 ~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~------~l~~~~~~~~~v~~~~v~~~~~--~~~~~~~~v~~~Pt~ 93 (130)
T 1wmj_A 22 KDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAP------VFAEYAKKFPGAVFLKVDVDEL--KEVAEKYNVEAMPTF 93 (130)
T ss_dssp SHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHH------HHHHHHHHCTTBCCEECCTTTS--GGGHHHHTCCSSCCC
T ss_pred HHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHH------HHHHHHHHCCCCEEEEEeccch--HHHHHHcCCCccceE
Confidence 46899999999999999999999999999999864 44454443 678888887653 357888999999998
Q ss_pred EEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 244 LVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 244 ~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
+|+ + .|+.+.++.| .+++++.+.|.+.+..
T Consensus 94 ~~~-~-~g~~~~~~~g-~~~~~l~~~l~~~~~~ 123 (130)
T 1wmj_A 94 LFI-K-DGAEADKVVG-ARKDDLQNTIVKHVGA 123 (130)
T ss_dssp CBC-T-TTTCCBCCCT-TCTTTHHHHHHHHTSS
T ss_pred EEE-e-CCeEEEEEeC-CCHHHHHHHHHHHHhc
Confidence 877 3 6988888888 4788888888877654
No 85
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=98.85 E-value=8e-09 Score=91.92 Aligned_cols=104 Identities=16% Similarity=0.205 Sum_probs=84.6
Q ss_pred ccccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEE
Q 020843 165 FNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVL 244 (320)
Q Consensus 165 ~~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~ 244 (320)
...+|++.+ .+.+|+++|+|+++||..|+.+...+ +.+.+.++.++.|+.++.+... .+++.|++..+|+++
T Consensus 18 t~~~f~~~v---~~~~k~vvv~F~a~wC~~C~~~~p~l---~~l~~~~~~~v~~~~vd~d~~~--~l~~~~~v~~~Pt~~ 89 (222)
T 3dxb_A 18 TDDSFDTDV---LKADGAILVDFWAEWCGPCKMIAPIL---DEIADEYQGKLTVAKLNIDQNP--GTAPKYGIRGIPTLL 89 (222)
T ss_dssp CTTTHHHHH---TTCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTCEEEEEETTTCT--TTGGGGTCCSBSEEE
T ss_pred CHHHHHHHH---HhcCCEEEEEEECCcCHHHHHHHHHH---HHHHHHhcCCcEEEEEECCCCH--HHHHHcCCCcCCEEE
Confidence 345776654 45799999999999999999997644 5566666667889999887543 478899999999999
Q ss_pred EEecCCCceEEEEecCCChHHHHHHHHHHHhcCC
Q 020843 245 VVDPITGQKMRSWCGMVQPESLLEDLVPFMDGGP 278 (320)
Q Consensus 245 Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~~~ 278 (320)
|+. .|+.+.++.|..+.+++.+.|...+....
T Consensus 90 ~~~--~G~~~~~~~G~~~~~~l~~~l~~~l~~~~ 121 (222)
T 3dxb_A 90 LFK--NGEVAATKVGALSKGQLKEFLDANLAGSA 121 (222)
T ss_dssp EEE--TTEEEEEEESCCCHHHHHHHHHHHSCCSC
T ss_pred EEE--CCeEEEEeccccChHHHHHHHHhhccccc
Confidence 996 59999899999999999999999987544
No 86
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=98.85 E-value=1.4e-08 Score=79.46 Aligned_cols=100 Identities=14% Similarity=0.141 Sum_probs=73.1
Q ss_pred ccccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEE
Q 020843 165 FNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVL 244 (320)
Q Consensus 165 ~~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~ 244 (320)
...+|++++.. ..+|+++|+|+++||..|+.+...+ +.+.+... ++.|+.+|.+.. ...+++.|++..+|+++
T Consensus 11 ~~~~~~~~~~~--~~~~~vlv~f~a~wC~~C~~~~~~l---~~~~~~~~-~v~~~~vd~~~~-~~~~~~~~~v~~~Pt~~ 83 (111)
T 2pu9_C 11 NKDTFWPIVKA--AGDKPVVLDMFTQWCGPSKAMAPKY---EKLAEEYL-DVIFLKLDCNQE-NKTLAKELGIRVVPTFK 83 (111)
T ss_dssp CTTTHHHHHTT--CTTSCEEEEEECTTCHHHHHHHHHH---HHHHHHCT-TSEEEEEECSST-THHHHHHHCCSBSSEEE
T ss_pred chHHHHHHHHh--cCCCEEEEEEECCcCHhHHHHCHHH---HHHHHHCC-CeEEEEEecCcc-hHHHHHHcCCCeeeEEE
Confidence 34577776642 3589999999999999999997543 22333333 488899988732 34688899999999954
Q ss_pred EEecCCCceEEEEecCCChHHHHHHHHHHH
Q 020843 245 VVDPITGQKMRSWCGMVQPESLLEDLVPFM 274 (320)
Q Consensus 245 Iidp~tG~~v~~~~G~~~~~~fl~~L~~fl 274 (320)
+++ .|+.+.++.|.. ++++.+.|..++
T Consensus 84 -~~~-~G~~~~~~~G~~-~~~l~~~l~~~~ 110 (111)
T 2pu9_C 84 -ILK-ENSVVGEVTGAK-YDKLLEAIQAAR 110 (111)
T ss_dssp -EES-SSSEEEEEESSC-HHHHHHHHHHHH
T ss_pred -EEe-CCcEEEEEcCCC-HHHHHHHHHHhh
Confidence 554 699988899974 787777776654
No 87
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=98.85 E-value=7.7e-09 Score=88.83 Aligned_cols=98 Identities=9% Similarity=0.107 Sum_probs=77.7
Q ss_pred ccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh---cceEEEEeecCChHHHHHHHHcCCCCCcEE
Q 020843 167 GSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS---TNFIFWQVYDDTSEGKKVCTYYKLDSIPVV 243 (320)
Q Consensus 167 gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~---~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i 243 (320)
.+|++++.. +.+|+++|+|+++||.+|..|. |.+.++-+ +..+|+++|++.. ..++..|++.+.||+
T Consensus 30 ~~f~~~v~~--~~~k~VVVdF~A~WCgPCk~m~------PvleelA~e~~~~v~f~kVDVDe~--~e~a~~y~V~siPT~ 99 (160)
T 2av4_A 30 WAVDQAIVN--EDERLVCIRFGHDYDPDCMKMD------ELLYKVADDIKNFCVIYLVDITEV--PDFNTMYELYDPVSV 99 (160)
T ss_dssp HHHHHHHHH--CSSSEEEEEEECTTSHHHHHHH------HHHHHHHHHHTTTEEEEEEETTTC--CTTTTTTTCCSSEEE
T ss_pred HHHHHHHHh--cCCCEEEEEEECCCChhHHHHH------HHHHHHHHHccCCcEEEEEECCCC--HHHHHHcCCCCCCEE
Confidence 367766632 5789999999999999999995 44444444 4578999999863 348899999999999
Q ss_pred EEEecCCCceE--E-------EEecCCC-hHHHHHHHHHHHhc
Q 020843 244 LVVDPITGQKM--R-------SWCGMVQ-PESLLEDLVPFMDG 276 (320)
Q Consensus 244 ~Iidp~tG~~v--~-------~~~G~~~-~~~fl~~L~~fld~ 276 (320)
+|+- .|+.+ . ++.|..+ .++|++.|..++..
T Consensus 100 ~fFk--~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r~ 140 (160)
T 2av4_A 100 MFFY--RNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIFRG 140 (160)
T ss_dssp EEEE--TTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHHHH
T ss_pred EEEE--CCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHHHH
Confidence 9886 48887 4 7889877 89999998888754
No 88
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=98.84 E-value=7.5e-09 Score=83.72 Aligned_cols=88 Identities=10% Similarity=0.078 Sum_probs=68.8
Q ss_pred cCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh-cceEEEEeecCC-----------------------hHHHHHHHH
Q 020843 179 QDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS-TNFIFWQVYDDT-----------------------SEGKKVCTY 234 (320)
Q Consensus 179 ~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~-~nFV~~q~d~~s-----------------------~eg~~~~~~ 234 (320)
.+|++||+|+++||..|+.+...+ ..+.+.+. .++.++.++.+. .....+++.
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 109 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQF---QSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKE 109 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHH---HHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHH---HHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHh
Confidence 789999999999999999986433 22333333 467888887754 113467889
Q ss_pred cCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHH
Q 020843 235 YKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDL 270 (320)
Q Consensus 235 Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L 270 (320)
|++..+|+++|||+ .|+.+..+.|..+.+++.+.|
T Consensus 110 ~~v~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 110 YHIITIPTSFLLNE-KGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp TTCCEESEEEEECT-TCCEEEEEESCCCHHHHHHHH
T ss_pred cCcCccCeEEEEcC-CCcEEEEEcCCcCHHHHHHhh
Confidence 99999999999997 699999999999999887765
No 89
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=98.84 E-value=1.2e-08 Score=81.05 Aligned_cols=91 Identities=14% Similarity=0.252 Sum_probs=69.6
Q ss_pred hcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCC--------------------------hHHHHH
Q 020843 178 VQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDT--------------------------SEGKKV 231 (320)
Q Consensus 178 ~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s--------------------------~eg~~~ 231 (320)
-++|++||+|+++||..|..+-..+ ..+.+....++.++.++... .....+
T Consensus 20 ~~gk~~lv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 96 (138)
T 4evm_A 20 YKGKKVYLKFWASWCSICLASLPDT---DEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKL 96 (138)
T ss_dssp GTTSEEEEEECCTTCHHHHHHHHHH---HHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHH
T ss_pred hCCCEEEEEEEcCcCHHHHHHHHHH---HHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHH
Confidence 4689999999999999998886543 33333344578888773211 112357
Q ss_pred HHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHH
Q 020843 232 CTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVP 272 (320)
Q Consensus 232 ~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~ 272 (320)
++.|++..+|+++|||+ .|+.+.++.|..+++++.+.|.+
T Consensus 97 ~~~~~v~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 97 LETYGVRSYPTQAFIDK-EGKLVKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp HHHTTCCSSSEEEEECT-TCCEEEEEESCCCHHHHHHHHHH
T ss_pred HHHcCcccCCeEEEECC-CCcEEEeecCCCcHHHHHHHHHh
Confidence 88999999999999997 69999999999999988887765
No 90
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=98.83 E-value=3.4e-09 Score=85.88 Aligned_cols=98 Identities=16% Similarity=0.188 Sum_probs=70.8
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCCCCc--------------chhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHH
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQSTKEF--------------SSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKV 231 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~~~f--------------~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~ 231 (320)
..+|++.. .+.+|+++|+|+++||. .|+.+...+ +.+.+-+..++.+..+|.+.. ..+
T Consensus 10 ~~~f~~~~---~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~---~~l~~~~~~~~~~~~vd~d~~--~~l 81 (123)
T 1oaz_A 10 DDSFDTDV---LKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPIL---DEIADEYQGKLTVAKLNIDQN--PGT 81 (123)
T ss_dssp STTHHHHT---TSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHH---TTC-------CEEEEEETTSC--TTT
T ss_pred hhhHHHHH---HhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHH---HHHHHHhcCCeEEEEEECCCC--HHH
Confidence 34665443 57899999999999999 666665422 233344445789999998764 357
Q ss_pred HHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHH
Q 020843 232 CTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPF 273 (320)
Q Consensus 232 ~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~f 273 (320)
++.|++..+|+++++ + .|+.+.++.|..+++++.+.|.+.
T Consensus 82 ~~~~~v~~~Pt~~~~-~-~G~~~~~~~G~~~~~~l~~~l~~~ 121 (123)
T 1oaz_A 82 APKYGIRGIPTLLLF-K-NGEVAATKVGALSKGQLKEFLDAN 121 (123)
T ss_dssp GGGGTCCBSSEEEEE-E-SSSEEEEEESCCCHHHHHHHHTTT
T ss_pred HHHcCCCccCEEEEE-E-CCEEEEEEeCCCCHHHHHHHHHHH
Confidence 889999999999999 4 699999999999988887777543
No 91
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=98.82 E-value=3e-08 Score=82.08 Aligned_cols=97 Identities=13% Similarity=0.092 Sum_probs=73.5
Q ss_pred HHHHHhcCCeEEEEEeCCCCcchhh-hhhccCCCHHHHHHHh----cceEEEEeecC-------ChHH------------
Q 020843 173 KDAASVQDKWLLVNLQSTKEFSSHM-LNRDTWANEAVSQTIS----TNFIFWQVYDD-------TSEG------------ 228 (320)
Q Consensus 173 ~~~Ak~~~K~LLV~l~~~~~f~c~~-lnRdvw~n~~V~~~l~----~nFV~~q~d~~-------s~eg------------ 228 (320)
...+.-++|++||+|+++||..|.. +- +.+.++.+ .++.++.++.+ +.+.
T Consensus 23 ~~l~~~~gk~vlv~F~a~~C~~C~~e~~------~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (160)
T 3lor_A 23 LSNEDLRGKVVVVEVFQMLCPGCVNHGV------PQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKF 96 (160)
T ss_dssp CCHHHHTTSEEEEEEECTTCHHHHHTHH------HHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCS
T ss_pred cCHHHhCCCEEEEEEEcCCCcchhhhhh------HHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCC
Confidence 3344456999999999999999987 33 34444433 34778877752 2111
Q ss_pred -------------HHHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 229 -------------KKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 229 -------------~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
..+.+.|++..+|+++|||+ .|+.+.++.|..+++++.+.|...+.+
T Consensus 97 ~~~~d~~~~~~~~~~~~~~~~v~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~i~~ll~~ 156 (160)
T 3lor_A 97 PVAVDMPREGQRIPSTMKKYRLEGTPSIILADR-KGRIRQVQFGQVDDFVLGLLLGSLLSE 156 (160)
T ss_dssp CEEEECCCTTCSSCHHHHHTTCCSSSEEEEECT-TSBEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred cEEECCccccchhhhHHHhcccCccceEEEECC-CCcEEEEecCcCCHHHHHHHHHHHHhc
Confidence 12778899999999999997 599999999999999999999998865
No 92
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=98.81 E-value=5.2e-09 Score=82.11 Aligned_cols=99 Identities=12% Similarity=0.186 Sum_probs=74.3
Q ss_pred ccccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh---cceEEEEeecCChHHHHHHHHcCCCCCc
Q 020843 165 FNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS---TNFIFWQVYDDTSEGKKVCTYYKLDSIP 241 (320)
Q Consensus 165 ~~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~---~nFV~~q~d~~s~eg~~~~~~Y~v~~~P 241 (320)
...+|++++ +++|++||+|+++||..|+.+...+ ..+.+.++ .++++..+|.+... .+++.|++..+|
T Consensus 13 ~~~~~~~~~----~~~~~~lv~f~~~~C~~C~~~~~~~---~~~~~~~~~~~~~v~~~~vd~~~~~--~~~~~~~v~~~P 83 (120)
T 1mek_A 13 RKSNFAEAL----AAHKYLLVEFYAPWCGHCKALAPEY---AKAAGKLKAEGSEIRLAKVDATEES--DLAQQYGVRGYP 83 (120)
T ss_dssp CTTTHHHHH----HHCSEEEEEEECSSCSTTSTTHHHH---HHHHHTTTTTCCCCBCEEEETTTCC--SSHHHHTCCSSS
T ss_pred chhhHHHHH----ccCCeEEEEEECCCCHHHHHhhHHH---HHHHHHHhccCCcEEEEEEcCCCCH--HHHHHCCCCccc
Confidence 346787765 3689999999999999999996443 22333333 35888888876532 577889999999
Q ss_pred EEEEEecCCCceE--EEEecCCChHHHHHHHHHHH
Q 020843 242 VVLVVDPITGQKM--RSWCGMVQPESLLEDLVPFM 274 (320)
Q Consensus 242 ~i~Iidp~tG~~v--~~~~G~~~~~~fl~~L~~fl 274 (320)
+++|+. .|+.+ ..+.|..+++.+.+.|.+.+
T Consensus 84 t~~~~~--~g~~~~~~~~~g~~~~~~l~~~l~~~~ 116 (120)
T 1mek_A 84 TIKFFR--NGDTASPKEYTAGREADDIVNWLKKRT 116 (120)
T ss_dssp EEEEEE--SSCSSSCEECCCCSSHHHHHHHHHTTS
T ss_pred EEEEEe--CCCcCCcccccCccCHHHHHHHHHhcc
Confidence 999994 58776 78889889988877776544
No 93
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=98.81 E-value=2.7e-08 Score=80.18 Aligned_cols=98 Identities=11% Similarity=0.019 Sum_probs=72.9
Q ss_pred ccccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHH-----hcceEEEEeecCChHHHHHHHHcCCCC
Q 020843 165 FNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTI-----STNFIFWQVYDDTSEGKKVCTYYKLDS 239 (320)
Q Consensus 165 ~~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l-----~~nFV~~q~d~~s~eg~~~~~~Y~v~~ 239 (320)
...+|++.+. +.+|++||+|+++||..|+.+...+ ..+.+.+ +.++++..+|.+.. ..+++.|++..
T Consensus 21 ~~~~f~~~~~---~~~~~vlv~F~a~wC~~C~~~~p~~---~~la~~~~~~~~~~~v~~~~vd~~~~--~~l~~~~~v~~ 92 (127)
T 3h79_A 21 TDETFDSIVM---DPEKDVFVLYYVPWSRHSVAAMRLW---DDLSMSQSQKRNHLTFVAARIDGEKY--PDVIERMRVSG 92 (127)
T ss_dssp CTTTHHHHHT---CTTCEEEEEEECTTCHHHHHHHHHH---HHHHHHHHTSTTTTTEEEEEEETTTC--HHHHHHTTCCS
T ss_pred ChhhHHHHHh---CCCCCEEEEEECCccHHHHHHhHHH---HHHHHHHHhcccCCCeEEEEEEcccc--HhHHHhcCCcc
Confidence 3457776654 4689999999999999999996421 2222222 24699999998754 46889999999
Q ss_pred CcEEEEEecCCCceE--EEEecCCChHHHHHHHHH
Q 020843 240 IPVVLVVDPITGQKM--RSWCGMVQPESLLEDLVP 272 (320)
Q Consensus 240 ~P~i~Iidp~tG~~v--~~~~G~~~~~~fl~~L~~ 272 (320)
+|+++++.+ |..+ ..+.|..+.+.+++.|.+
T Consensus 93 ~Pt~~~~~~--g~~~~~~~~~G~~~~~~l~~~i~~ 125 (127)
T 3h79_A 93 FPTMRYYTR--IDKQEPFEYSGQRYLSLVDSFVFQ 125 (127)
T ss_dssp SSEEEEECS--SCSSSCEECCSCCCHHHHHHHHHH
T ss_pred CCEEEEEeC--CCCCCceEecCCccHHHHHHHHHh
Confidence 999999986 3332 467898999888877764
No 94
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=98.81 E-value=8.9e-09 Score=86.47 Aligned_cols=92 Identities=14% Similarity=0.124 Sum_probs=74.7
Q ss_pred hcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCC---------------------hHHHHHHHHcC
Q 020843 178 VQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDT---------------------SEGKKVCTYYK 236 (320)
Q Consensus 178 ~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s---------------------~eg~~~~~~Y~ 236 (320)
..+|+++|+|+++||..|+.+. +.+.++.++++.++.++.++ .....+++.|+
T Consensus 49 ~~gk~vll~F~a~~C~~C~~~~------~~l~~l~~~~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 122 (168)
T 2b1k_A 49 TQGKPVLLNVWATWCPTCRAEH------QYLNQLSAQGIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLG 122 (168)
T ss_dssp CCSSCEEEEEECTTCHHHHHHH------HHHHHHHHTTCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHT
T ss_pred cCCCEEEEEEECCCCHHHHHHH------HHHHHHHHCCCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcC
Confidence 4689999999999999999885 56677777777777777432 12235777889
Q ss_pred CCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 237 LDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 237 v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
+..+|+++|||+ .|+.+.++.|..+++.+.+.|.+.+++
T Consensus 123 v~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~~l~~ 161 (168)
T 2b1k_A 123 VYGAPETFLIDG-NGIIRYRHAGDLNPRVWEEEIKPLWEK 161 (168)
T ss_dssp CCSSSEEEEECT-TSBEEEEEESCCCHHHHHHTTHHHHHH
T ss_pred ccccCEEEEECC-CCeEEEEEeCCCCHHHHHHHHHHHHHH
Confidence 999999999997 599998999999999998888888764
No 95
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=98.81 E-value=5e-08 Score=81.01 Aligned_cols=97 Identities=16% Similarity=0.130 Sum_probs=72.9
Q ss_pred hcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh-cceEEEEeecCCh--HHHHHHHHc-------------------
Q 020843 178 VQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS-TNFIFWQVYDDTS--EGKKVCTYY------------------- 235 (320)
Q Consensus 178 ~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~-~nFV~~q~d~~s~--eg~~~~~~Y------------------- 235 (320)
-++|++||+|+++||..|..+...+ ..+.+.+. .++.++.++.+.. ...++.+.+
T Consensus 32 ~~gk~vlv~f~~~~C~~C~~~~~~l---~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (165)
T 3or5_A 32 LKGKAYIVNFFATWCPPCRSEIPDM---VQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNG 108 (165)
T ss_dssp GTTCEEEEEEECTTSHHHHHHHHHH---HHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHHHHHT
T ss_pred cCCCEEEEEEEcCcCHHHHHHHHHH---HHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHHHHhh
Confidence 3689999999999999999986543 23333333 3588888887652 234444333
Q ss_pred ----CCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhcCC
Q 020843 236 ----KLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDGGP 278 (320)
Q Consensus 236 ----~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~~~ 278 (320)
++..+|+++|||+ .|+.+..+.|..+++++.+.|...+.+..
T Consensus 109 ~~~~~i~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~~l~~~~ 154 (165)
T 3or5_A 109 YIDGGITGIPTSFVIDA-SGNVSGVIVGPRSKADFDRIVKMALGAKA 154 (165)
T ss_dssp TSTTCSCSSSEEEEECT-TSBEEEEECSCCCHHHHHHHHHHHHC---
T ss_pred hhccCCCCCCeEEEECC-CCcEEEEEcCCCCHHHHHHHHHHHHhhhc
Confidence 6889999999997 69999999999999999999999987643
No 96
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.80 E-value=1.5e-08 Score=86.72 Aligned_cols=95 Identities=16% Similarity=0.191 Sum_probs=77.3
Q ss_pred HHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCC-hH--------------------HHHHHH
Q 020843 175 AASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDT-SE--------------------GKKVCT 233 (320)
Q Consensus 175 ~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s-~e--------------------g~~~~~ 233 (320)
.+.-.+|++||+|+++||..|...- +.+.++.++++.++.++.++ .+ ...+++
T Consensus 53 l~~~~gk~vll~F~a~~C~~C~~~~------~~l~~l~~~~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 126 (176)
T 3kh7_A 53 EADLKGKPALVNVWGTWCPSCRVEH------PELTRLAEQGVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGL 126 (176)
T ss_dssp GGGGCSSCEEEEEECTTCHHHHHHH------HHHHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHH
T ss_pred HHHhCCCEEEEEEECCcCHHHHHHH------HHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHH
Confidence 3445689999999999999998883 67788888788888887532 21 235666
Q ss_pred HcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 234 YYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 234 ~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
.|++..+|+++|||+ .|+.+.++.|..+++++.+.|...+++
T Consensus 127 ~~~v~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~~l~~ 168 (176)
T 3kh7_A 127 DLGVYGAPETYLIDK-QGIIRHKIVGVVDQKVWREQLAPLYQQ 168 (176)
T ss_dssp HHTCCSSCEEEEECT-TCBEEEEEESCCCHHHHHHHTHHHHHH
T ss_pred HcCCCCCCeEEEECC-CCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 788899999999997 699999999999999999999998875
No 97
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=98.80 E-value=7.4e-08 Score=80.85 Aligned_cols=101 Identities=10% Similarity=0.136 Sum_probs=82.9
Q ss_pred ccccccHHHHHHHHHhcCCeEEEEEeCCCC--cchhhhhhccCCCHHHHHHHhc---ceEEEEeecCChHHHHHHHHcCC
Q 020843 163 LMFNGSFEKAKDAASVQDKWLLVNLQSTKE--FSSHMLNRDTWANEAVSQTIST---NFIFWQVYDDTSEGKKVCTYYKL 237 (320)
Q Consensus 163 ~~~~gsf~~A~~~Ak~~~K~LLV~l~~~~~--f~c~~lnRdvw~n~~V~~~l~~---nFV~~q~d~~s~eg~~~~~~Y~v 237 (320)
.+...+|++.+. +.++++||+|+++|| .+|+.+. |-+.++.++ .+.++++|++. ...++.+|+|
T Consensus 19 ~vt~~~F~~~v~---~~~~~vlVdF~A~wCr~gpCk~ia------Pvleela~e~~~~v~~~KVdvDe--~~~la~~ygV 87 (137)
T 2qsi_A 19 LVDEATVDDFIA---HSGKIVVLFFRGDAVRFPEAADLA------VVLPELINAFPGRLVAAEVAAEA--ERGLMARFGV 87 (137)
T ss_dssp EECTTTHHHHHH---TSSSEEEEEECCCTTTCTTHHHHH------HHHHHHHHTSTTTEEEEEECGGG--HHHHHHHHTC
T ss_pred ccCHhHHHHHHh---cCCCcEEEEEeCCccCCCchhhHH------hHHHHHHHHccCCcEEEEEECCC--CHHHHHHcCC
Confidence 344578988773 445699999999999 9999994 555555543 57899998754 5679999999
Q ss_pred CCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 238 DSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 238 ~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
.++||++++- .|+.+.++.|..+.+++.+.|.+.+++
T Consensus 88 ~siPTlilFk--dG~~v~~~vG~~~k~~l~~~l~~~l~~ 124 (137)
T 2qsi_A 88 AVCPSLAVVQ--PERTLGVIAKIQDWSSYLAQIGAMLAE 124 (137)
T ss_dssp CSSSEEEEEE--CCEEEEEEESCCCHHHHHHHHHHHHHH
T ss_pred ccCCEEEEEE--CCEEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 9999999997 699999999999999999999888853
No 98
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=98.78 E-value=2.4e-08 Score=83.12 Aligned_cols=91 Identities=7% Similarity=0.112 Sum_probs=72.1
Q ss_pred cCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCCceEE---
Q 020843 179 QDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMR--- 255 (320)
Q Consensus 179 ~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~--- 255 (320)
.+|+++|+|+++||.+|+.+...+ +.+.+.+..++.|+.+|++... .+++.|++..+|+++|+. .|+.+.
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l---~~l~~~~~~~v~~~~vd~d~~~--~~~~~~~i~~~Pt~~~~~--~G~~v~~~~ 94 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVL---YSIAEKVKNFAVIYLVDITEVP--DFNKMYELYDPCTVMFFF--RNKHIMIDL 94 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHH---HHHHHHHTTTEEEEEEETTTCC--TTTTSSCSCSSCEEEEEE--TTEEEEEEC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHH---HHHHHHhCCCeEEEEEccccCH--HHHHHcCCCCCCEEEEEE--CCcEEEEec
Confidence 689999999999999999997543 3455555567999999987543 478899999999999996 488775
Q ss_pred ------EEecCCC-hHHHHHHHHHHHhc
Q 020843 256 ------SWCGMVQ-PESLLEDLVPFMDG 276 (320)
Q Consensus 256 ------~~~G~~~-~~~fl~~L~~fld~ 276 (320)
++.|.++ .++|++.|...+..
T Consensus 95 g~~~~~~~~g~~~~~~~l~~~i~~~~~~ 122 (142)
T 1qgv_A 95 GTGNNNKINWAMEDKQEMVDIIETVYRG 122 (142)
T ss_dssp C------CCSCCSCHHHHHHHHHHHHHH
T ss_pred CCCCcceeeeecCcHHHHHHHHHHHHHH
Confidence 3556664 89999999988864
No 99
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=98.78 E-value=2e-08 Score=81.56 Aligned_cols=90 Identities=18% Similarity=0.309 Sum_probs=69.3
Q ss_pred cCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHH-hc-ceEEEEeecCChH-----------------------HHHHHH
Q 020843 179 QDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTI-ST-NFIFWQVYDDTSE-----------------------GKKVCT 233 (320)
Q Consensus 179 ~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l-~~-nFV~~q~d~~s~e-----------------------g~~~~~ 233 (320)
.+|++||+|+++||..|+.+...+ ..+.+-+ .+ ++.++.++.+... ...+++
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l---~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 108 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAEL---KRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAK 108 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHH---HHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHH
T ss_pred CCcEEEEEEECCCCHHHHHHhHHH---HHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHH
Confidence 689999999999999999986433 2233333 32 4888888887654 457889
Q ss_pred HcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHh
Q 020843 234 YYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 234 ~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld 275 (320)
.|++..+|+++|||+ .|+.+.++. +.+++.+.|.+.+.
T Consensus 109 ~~~v~~~P~~~lid~-~G~i~~~~~---~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 109 QYAILTLPTNILLSP-TGKILARDI---QGEALTGKLKELLK 146 (148)
T ss_dssp HTTCCSSSEEEEECT-TSBEEEESC---CHHHHHHHHHHHC-
T ss_pred hcCCCCcCEEEEECC-CCeEEEecC---CHHHHHHHHHHHHc
Confidence 999999999999997 588876643 78888888887764
No 100
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=98.25 E-value=7.5e-10 Score=84.92 Aligned_cols=94 Identities=20% Similarity=0.227 Sum_probs=73.2
Q ss_pred HHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCCc
Q 020843 173 KDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQ 252 (320)
Q Consensus 173 ~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~ 252 (320)
.+...+.+|+++|+|+++||..|+.+...+ +.+.+.+..++.++.++.+. ...+++.|++..+|+++++ + .|+
T Consensus 12 ~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~---~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~-~-~g~ 84 (106)
T 2yj7_A 12 EQEVLKSDKPVLVDFWAPWCGPCRMIAPII---EELAKEYEGKVKVVKVNVDE--NPNTAAQYGIRSIPTLLLF-K-NGQ 84 (106)
Confidence 334457789999999999999999997644 44555555567788887764 3468889999999999999 3 688
Q ss_pred eEEEEecCCChHHHHHHHHHH
Q 020843 253 KMRSWCGMVQPESLLEDLVPF 273 (320)
Q Consensus 253 ~v~~~~G~~~~~~fl~~L~~f 273 (320)
.+.++.|..+.+++.+.|.+.
T Consensus 85 ~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 85 VVDRLVGAQPKEALKERIDKH 105 (106)
Confidence 888888988888877776654
No 101
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=98.76 E-value=1e-07 Score=78.15 Aligned_cols=99 Identities=11% Similarity=0.165 Sum_probs=72.3
Q ss_pred HHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh-cceEEEEeecCChH--HH------------------HHHH
Q 020843 175 AASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS-TNFIFWQVYDDTSE--GK------------------KVCT 233 (320)
Q Consensus 175 ~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~-~nFV~~q~d~~s~e--g~------------------~~~~ 233 (320)
.+..++|++||+|+++||..|..+...+ ..+.+.+. .++.++.++.+... .. .+++
T Consensus 23 l~~~~gk~vll~f~~~~C~~C~~~~~~l---~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 99 (152)
T 3gl3_A 23 LSDKTGSVVYLDFWASWCGPCRQSFPWM---NQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPR 99 (152)
T ss_dssp GGGGTTSEEEEEEECTTCTHHHHHHHHH---HHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHH
T ss_pred HHHhCCCEEEEEEECCcCHHHHHHHHHH---HHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHH
Confidence 3445689999999999999999886553 23333333 34778888776432 11 5777
Q ss_pred HcCCCCCcEEEEEecCCCceEEEEecCCC--hHHHHHHHHHHHhcC
Q 020843 234 YYKLDSIPVVLVVDPITGQKMRSWCGMVQ--PESLLEDLVPFMDGG 277 (320)
Q Consensus 234 ~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~--~~~fl~~L~~fld~~ 277 (320)
.|++..+|+++|||+ .|+.+.++.|..+ .+++.+.|.+.+...
T Consensus 100 ~~~v~~~P~~~lid~-~G~i~~~~~g~~~~~~~~l~~~i~~~~~~~ 144 (152)
T 3gl3_A 100 LYGVKGMPTSFLIDR-NGKVLLQHVGFRPADKEALEQQILAALGGN 144 (152)
T ss_dssp HTTCCSSSEEEEECT-TSBEEEEEESCCTTTHHHHHHHHHHHTC--
T ss_pred HcCCCCCCeEEEECC-CCCEEEEEccCCCcCHHHHHHHHHHHHccc
Confidence 899999999999997 6999999999754 477888887776543
No 102
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=98.75 E-value=5.2e-08 Score=82.05 Aligned_cols=100 Identities=10% Similarity=0.017 Sum_probs=82.2
Q ss_pred ccccccHHHHHHHHHhcCCeEEEEEeCCC--CcchhhhhhccCCCHHHHHHHhc---c-eEEEEeecCChHHHHHHHHcC
Q 020843 163 LMFNGSFEKAKDAASVQDKWLLVNLQSTK--EFSSHMLNRDTWANEAVSQTIST---N-FIFWQVYDDTSEGKKVCTYYK 236 (320)
Q Consensus 163 ~~~~gsf~~A~~~Ak~~~K~LLV~l~~~~--~f~c~~lnRdvw~n~~V~~~l~~---n-FV~~q~d~~s~eg~~~~~~Y~ 236 (320)
.+...+|++.+. .++++||+|+++| |.+|+.+. |.+.++.++ . +.|+++|++ +...++.+|+
T Consensus 21 ~~t~~~F~~~v~----~~~~vlVdF~a~~crCgpCk~ia------Pvleela~e~~g~~v~~~KVdvD--e~~~lA~~yg 88 (140)
T 2qgv_A 21 PVSESRLDDWLT----QAPDGVVLLSSDPKRTPEVSDNP------VMIGELLHEFPDYTWQVAIADLE--QSEAIGDRFG 88 (140)
T ss_dssp ECCHHHHHHHHH----TCSSEEEEECCCTTTCTTTTHHH------HHHHHHHTTCTTSCCEEEECCHH--HHHHHHHHHT
T ss_pred cCCHHHHHHHHh----CCCCEEEEEeCCcccCCcHHHHH------hHHHHHHHHcCCCeEEEEEEECC--CCHHHHHHcC
Confidence 445568887772 6778999999998 99999994 666666654 4 788888876 5577999999
Q ss_pred CCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 237 LDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 237 v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
|.++|+++|+- .|+.+.++.|..+.+++.+.|.+++..
T Consensus 89 V~sIPTlilFk--~G~~v~~~~G~~~k~~l~~~i~~~l~~ 126 (140)
T 2qgv_A 89 AFRFPATLVFT--GGNYRGVLNGIHPWAELINLMRGLVEP 126 (140)
T ss_dssp CCSSSEEEEEE--TTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred CccCCEEEEEE--CCEEEEEEecCCCHHHHHHHHHHHhcC
Confidence 99999999996 699999999999999999999988843
No 103
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.75 E-value=7.9e-08 Score=81.97 Aligned_cols=95 Identities=12% Similarity=0.166 Sum_probs=71.5
Q ss_pred hcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc-ce------EEEEeecCC--h-HHHHHHHHc------------
Q 020843 178 VQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST-NF------IFWQVYDDT--S-EGKKVCTYY------------ 235 (320)
Q Consensus 178 ~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~-nF------V~~q~d~~s--~-eg~~~~~~Y------------ 235 (320)
-++|++||+|+.+||..|+.+...+ ..+.+.+++ ++ .++.++.+. + ...++++.|
T Consensus 57 ~~gk~vlv~F~a~~C~~C~~~~~~l---~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~ 133 (183)
T 3lwa_A 57 FENQVVILNAWGQWCAPCRSESDDL---QIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPF 133 (183)
T ss_dssp GTTSEEEEEEECTTCHHHHHHHHHH---HHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTC
T ss_pred hCCCEEEEEEECCcCHhHHHHHHHH---HHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcc
Confidence 3589999999999999999876443 233333333 36 888888766 3 345565543
Q ss_pred ---------CCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 236 ---------KLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 236 ---------~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
++..+|+++|||+ .|+.+.++.|..+++++.+.|...+.+
T Consensus 134 ~~~~~~~~~~v~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~ll~~ 182 (183)
T 3lwa_A 134 MTAASLGGVPASVIPTTIVLDK-QHRPAAVFLREVTSKDVLDVALPLVDE 182 (183)
T ss_dssp GGGGGTTTCCTTCCSEEEEECT-TSCEEEEECSCCCHHHHHHHHHHHHHC
T ss_pred hHHHHhccCCCCCCCeEEEECC-CCcEEEEEcCCCCHHHHHHHHHHHHhc
Confidence 4678999999997 599999999999999999999988764
No 104
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=98.74 E-value=5.4e-08 Score=79.89 Aligned_cols=96 Identities=14% Similarity=0.145 Sum_probs=73.1
Q ss_pred hcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc-ceEEEEeecC--Ch-------------------HHHHHHHHc
Q 020843 178 VQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST-NFIFWQVYDD--TS-------------------EGKKVCTYY 235 (320)
Q Consensus 178 ~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~-nFV~~q~d~~--s~-------------------eg~~~~~~Y 235 (320)
-++|++||+|+++||..|+.+...+ ..+.+-+.. ++.++.++.+ +. ....+++.|
T Consensus 26 ~~gk~~lv~f~~~~C~~C~~~~~~l---~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 102 (153)
T 2l5o_A 26 LQGKVTLINFWFPSCPGCVSEMPKI---IKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAF 102 (153)
T ss_dssp HTTCEEEEEEECTTCTTHHHHHHHH---HHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHH
T ss_pred hCCCEEEEEEECCCCccHHHHHHHH---HHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHc
Confidence 3689999999999999999876432 223333333 4777666532 21 134577789
Q ss_pred CCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhcC
Q 020843 236 KLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDGG 277 (320)
Q Consensus 236 ~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~~ 277 (320)
++..+|+++|||+ .|+.+..+.|..+++++.+.|...+...
T Consensus 103 ~i~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~ll~~~ 143 (153)
T 2l5o_A 103 GTQVYPTSVLIGK-KGEILKTYVGEPDFGKLYQEIDTAWRNS 143 (153)
T ss_dssp TCCSSSEEEEECS-SSCCCEEEESSCCHHHHHHHHHHHHHCC
T ss_pred CCCccCeEEEECC-CCcEEEEEcCCCCHHHHHHHHHHHHHhh
Confidence 9999999999998 5998888999999999999999998863
No 105
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=98.74 E-value=1.8e-08 Score=81.92 Aligned_cols=94 Identities=13% Similarity=0.107 Sum_probs=71.9
Q ss_pred hcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc-ceEEEEeecCCh-H-HHH---------------------HHH
Q 020843 178 VQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST-NFIFWQVYDDTS-E-GKK---------------------VCT 233 (320)
Q Consensus 178 ~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~-nFV~~q~d~~s~-e-g~~---------------------~~~ 233 (320)
-.+|++||+|+++||..|+.+...+- .+.+.+.+ ++.++.++.+.. + ..+ +++
T Consensus 29 ~~gk~vll~f~~~~C~~C~~~~~~l~---~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 105 (148)
T 3hcz_A 29 VQAKYTILFFWDSQCGHCQQETPKLY---DWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKI 105 (148)
T ss_dssp CCCSEEEEEEECGGGCTTCSHHHHHH---HHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHH
T ss_pred cCCCEEEEEEECCCCccHHHHHHHHH---HHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHH
Confidence 36899999999999999998864331 23333333 488888887642 2 122 778
Q ss_pred HcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHh
Q 020843 234 YYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 234 ~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld 275 (320)
.|++..+|+++|||+ .|+.+.++.|..+.+++++.|.+.+.
T Consensus 106 ~~~i~~~P~~~lid~-~G~i~~~~~g~~~~~~~l~~l~~~l~ 146 (148)
T 3hcz_A 106 TYDIYATPVLYVLDK-NKVIIAKRIGYENLDDFLVQYEKSLK 146 (148)
T ss_dssp HHCCCSSCEEEEECT-TCBEEEESCCGGGHHHHHHHHHHHHH
T ss_pred hcCcCCCCEEEEECC-CCcEEEecCCHHHHHHHHHHHHHHhc
Confidence 889999999999998 69999888898888999998887765
No 106
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.74 E-value=1.9e-08 Score=82.70 Aligned_cols=81 Identities=16% Similarity=0.308 Sum_probs=63.0
Q ss_pred ccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc--ceEEEEeecCChHHHHHHHHcCCCCCcEEE
Q 020843 167 GSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST--NFIFWQVYDDTSEGKKVCTYYKLDSIPVVL 244 (320)
Q Consensus 167 gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~--nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~ 244 (320)
.+|++++..+ ..+|++||+|+++||..|+.|.. .+.++.++ ++.|+.+|.+... +.|++..+|+++
T Consensus 18 ~~~~~~v~~~-~~~~~vvv~f~a~wC~~C~~~~p------~l~~la~~~~~v~~~~vd~~~~~-----~~~~i~~~Pt~~ 85 (135)
T 2dbc_A 18 NQYVNEVTNA-EKDLWVVIHLYRSSVPMCLVVNQ------HLSVLARKFPETKFVKAIVNSCI-----EHYHDNCLPTIF 85 (135)
T ss_dssp HHHHHHTTTC-CSSCEEEEEECCTTCHHHHHHHH------HHHHHHHHCSSEEEEEECCSSSC-----SSCCSSCCSEEE
T ss_pred HHHHHHHHhc-CCCCEEEEEEECCCChHHHHHHH------HHHHHHHHCCCcEEEEEEhhcCc-----ccCCCCCCCEEE
Confidence 4566655544 34689999999999999999964 44555443 5788999887643 689999999999
Q ss_pred EEecCCCceEEEEecCC
Q 020843 245 VVDPITGQKMRSWCGMV 261 (320)
Q Consensus 245 Iidp~tG~~v~~~~G~~ 261 (320)
|+. .|+.+.++.|..
T Consensus 86 ~~~--~G~~v~~~~G~~ 100 (135)
T 2dbc_A 86 VYK--NGQIEGKFIGII 100 (135)
T ss_dssp EES--SSSCSEEEESTT
T ss_pred EEE--CCEEEEEEEeEE
Confidence 996 699999999975
No 107
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=98.73 E-value=1.2e-07 Score=78.31 Aligned_cols=92 Identities=20% Similarity=0.299 Sum_probs=69.4
Q ss_pred cCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh-cceEEEEeecCChH-----------------------HHHHHHH
Q 020843 179 QDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS-TNFIFWQVYDDTSE-----------------------GKKVCTY 234 (320)
Q Consensus 179 ~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~-~nFV~~q~d~~s~e-----------------------g~~~~~~ 234 (320)
.+|++||+|+++||..|..+...+ ..+.+.+. .++.++.++.+... ...+++.
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l---~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 104 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYL---LKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLES 104 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHH---HHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHH
T ss_pred CCCEEEEEEECCCChhHHHHHHHH---HHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHH
Confidence 689999999999999999875443 22333333 35888888877532 4678889
Q ss_pred cCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhcC
Q 020843 235 YKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDGG 277 (320)
Q Consensus 235 Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~~ 277 (320)
|++..+|+++|||+ .|+.+.++ .+++++.+.|.+.+..-
T Consensus 105 ~~v~~~P~~~lid~-~G~i~~~~---~~~~~l~~~l~~l~~~~ 143 (152)
T 2lrn_A 105 YCIVGFPHIILVDP-EGKIVAKE---LRGDDLYNTVEKFVNGA 143 (152)
T ss_dssp TTCCSSCEEEEECT-TSEEEEEC---CCTTHHHHHHHHHHTSS
T ss_pred hCCCcCCeEEEECC-CCeEEEee---CCHHHHHHHHHHHHhhc
Confidence 99999999999997 59887664 45677777777777653
No 108
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=98.73 E-value=5.9e-08 Score=80.27 Aligned_cols=95 Identities=14% Similarity=0.167 Sum_probs=73.1
Q ss_pred HHHhcCCeEEEEEeCCCCcchhhh-hhccCCCHHHHHHHh----cceEEEEeecC-------ChH---------------
Q 020843 175 AASVQDKWLLVNLQSTKEFSSHML-NRDTWANEAVSQTIS----TNFIFWQVYDD-------TSE--------------- 227 (320)
Q Consensus 175 ~Ak~~~K~LLV~l~~~~~f~c~~l-nRdvw~n~~V~~~l~----~nFV~~q~d~~-------s~e--------------- 227 (320)
.+.-++|++||+|+++||..|... - +.+.++.+ .++.++.++.+ +.+
T Consensus 23 l~~~~gk~vlv~f~a~wC~~C~~~~~------~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (158)
T 3eyt_A 23 LADLRGKVIVIEAFQMLCPGCVMHGI------PLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPV 96 (158)
T ss_dssp TGGGTTSEEEEEEECTTCHHHHHTHH------HHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCE
T ss_pred HHHhCCCEEEEEEECCcCcchhhhhh------HHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceE
Confidence 344468999999999999999983 3 34444433 36777777753 111
Q ss_pred -----HH----HHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 228 -----GK----KVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 228 -----g~----~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
+. .+++.|++..+|+++|||+ .|+.+.++.|..+.+++.+.|...+.+
T Consensus 97 ~~d~~~~~~~~~~~~~~~v~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~i~~ll~~ 153 (158)
T 3eyt_A 97 GVDQPGDGAMPRTMAAYQMRGTPSLLLIDK-AGDLRAHHFGDVSELLLGAEIATLLGE 153 (158)
T ss_dssp EEECCCSSSSCHHHHHTTCCSSSEEEEECT-TSEEEEEEESCCCHHHHHHHHHHHHTS
T ss_pred EEcCccchhhHHHHHHcCCCCCCEEEEECC-CCCEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 11 5788899999999999997 699999999999999999999998864
No 109
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.73 E-value=2.2e-08 Score=81.83 Aligned_cols=93 Identities=11% Similarity=0.102 Sum_probs=71.7
Q ss_pred ccccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc-ceEEEEeecCChHHHHHHHHcCCC-----
Q 020843 165 FNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST-NFIFWQVYDDTSEGKKVCTYYKLD----- 238 (320)
Q Consensus 165 ~~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~-nFV~~q~d~~s~eg~~~~~~Y~v~----- 238 (320)
...+|++++ ++.++|++||+|+++||..|+.+...+ +.+.+-++. ++.|+.+|.+.. ..+++.|++.
T Consensus 13 ~~~~f~~~~--~~~~~~~vlv~f~a~wC~~C~~~~p~~---~~l~~~~~~~~v~~~~vd~~~~--~~~~~~~~v~~~~~~ 85 (137)
T 2dj0_A 13 NDKTIDEEL--ERDKRVTWIVEFFANWSNDCQSFAPIY---ADLSLKYNCTGLNFGKVDVGRY--TDVSTRYKVSTSPLT 85 (137)
T ss_dssp CTTHHHHHH--HHSTTSCEEEEECCTTCSTTTTTHHHH---HHHHHHHCSSSCEEEECCTTTC--HHHHHHTTCCCCSSS
T ss_pred cHhhHHHHH--hcCCCCEEEEEEECCCCHHHHHHHHHH---HHHHHHhCCCCeEEEEEeCccC--HHHHHHccCcccCCc
Confidence 346788887 455678999999999999999997543 344444553 799999988754 4588899998
Q ss_pred -CCcEEEEEecCCCceEEEEecCCChHHH
Q 020843 239 -SIPVVLVVDPITGQKMRSWCGMVQPESL 266 (320)
Q Consensus 239 -~~P~i~Iidp~tG~~v~~~~G~~~~~~f 266 (320)
.+|+++++. .|+.+.++.|..+.+++
T Consensus 86 ~~~Pt~~~~~--~G~~~~~~~G~~~~~~l 112 (137)
T 2dj0_A 86 KQLPTLILFQ--GGKEAMRRPQIDKKGRA 112 (137)
T ss_dssp SCSSEEEEES--SSSEEEEESCBCSSSCB
T ss_pred CCCCEEEEEE--CCEEEEEecCcCchHHH
Confidence 999999993 59998888887665433
No 110
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=98.73 E-value=4.8e-08 Score=80.45 Aligned_cols=92 Identities=17% Similarity=0.166 Sum_probs=70.8
Q ss_pred CeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc-ceEEEEeec---CC----------------------hHHHHHHHH
Q 020843 181 KWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST-NFIFWQVYD---DT----------------------SEGKKVCTY 234 (320)
Q Consensus 181 K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~-nFV~~q~d~---~s----------------------~eg~~~~~~ 234 (320)
|++||+|+++||..|..+...+ .++.++ ++.++.++. ++ .....+++.
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l------~~l~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 104 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGL------HRVAEETGVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAAR 104 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHH------HHHHHHHCCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTT
T ss_pred CeEEEEEEcccChhHHHHHHHH------HHHHHHcCCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHH
Confidence 9999999999999999986543 333322 566666665 22 145678889
Q ss_pred cCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 020843 235 YKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDGGPR 279 (320)
Q Consensus 235 Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~~~~ 279 (320)
|++..+|+++|||+ .|+.+..+.|..+++++.+.|.+.+...+.
T Consensus 105 ~~v~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~~~~~~~~ 148 (154)
T 3ia1_A 105 FKVLGQPWTFVVDR-EGKVVALFAGRAGREALLDALLLAGADLEG 148 (154)
T ss_dssp SSBCSSCEEEEECT-TSEEEEEEESBCCHHHHHHHHHHTTCCC--
T ss_pred hCCCcccEEEEECC-CCCEEEEEcCCCCHHHHHHHHHhccCcccc
Confidence 99999999999997 699999999999999988888887765443
No 111
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.73 E-value=7.3e-08 Score=79.21 Aligned_cols=99 Identities=15% Similarity=0.179 Sum_probs=71.4
Q ss_pred HhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc-ceEEEEeecCCh--HH-------------------HHHHHH
Q 020843 177 SVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST-NFIFWQVYDDTS--EG-------------------KKVCTY 234 (320)
Q Consensus 177 k~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~-nFV~~q~d~~s~--eg-------------------~~~~~~ 234 (320)
.-.+|++||+|+++||..|+.+-..+ ..+.+.+.+ ++.++.++.+.. +. ..+.+.
T Consensus 25 ~~~gk~vll~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 101 (154)
T 3kcm_A 25 DLKGQVVIVNFWATWCPPCREEIPSM---MRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKL 101 (154)
T ss_dssp GGTTSEEEEEEECTTCHHHHHHHHHH---HHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHH
T ss_pred hcCCCEEEEEEECCCCHHHHHHHHHH---HHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHH
Confidence 34789999999999999999986543 333333433 677888877653 22 237788
Q ss_pred cCCCCCcEEEEEecCCCceEEEEecCC--ChHHHHHHHHHHHhcCCC
Q 020843 235 YKLDSIPVVLVVDPITGQKMRSWCGMV--QPESLLEDLVPFMDGGPR 279 (320)
Q Consensus 235 Y~v~~~P~i~Iidp~tG~~v~~~~G~~--~~~~fl~~L~~fld~~~~ 279 (320)
|++..+|+++|||+ .|+.+.++.|.. +.+++.+.|.......+.
T Consensus 102 ~~v~~~P~~~lid~-~G~i~~~~~g~~~~~~~~l~~~l~~l~~~~~~ 147 (154)
T 3kcm_A 102 YGTTGVPETFVIDR-HGVILKKVVGAMEWDHPEVIAFLNNELSKARE 147 (154)
T ss_dssp HTCCSBCEEEEECT-TSBEEEEEESCCCTTSHHHHHHHHTC------
T ss_pred hCCCCCCeEEEECC-CCcEEEEEcCCCccccHHHHHHHHHHHHHhhh
Confidence 99999999999997 699999999975 677888888877665443
No 112
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=98.72 E-value=1.7e-08 Score=79.99 Aligned_cols=89 Identities=11% Similarity=0.116 Sum_probs=70.2
Q ss_pred hcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc-----ceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCCc
Q 020843 178 VQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST-----NFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQ 252 (320)
Q Consensus 178 ~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~-----nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~ 252 (320)
..+|++||+|+++||..|+.+...+ +.+.+.+.. ++.|..+|.+..+ +++ ++..+|+++++++ .|+
T Consensus 23 ~~~~~vlv~f~a~wC~~C~~~~p~~---~~~~~~~~~~~~~~~v~~~~vd~~~~~---~~~--~v~~~Pt~~~~~~-~~~ 93 (121)
T 2djj_A 23 DDTKDVLIEFYAPWCGHCKALAPKY---EELGALYAKSEFKDRVVIAKVDATAND---VPD--EIQGFPTIKLYPA-GAK 93 (121)
T ss_dssp CTTSCEEEEEECSSCTTHHHHHHHH---HHHHHHHTTSSCTTSSEEEEEETTTSC---CSS--CCSSSSEEEEECS-SCT
T ss_pred cCCCCEEEEEECCCCHhHHHhhHHH---HHHHHHHhhcccCCceEEEEEECcccc---ccc--ccCcCCeEEEEeC-cCC
Confidence 4689999999999999999998754 456666665 7999999987654 444 8999999999986 345
Q ss_pred e-EEEEecCCChHHHHHHHHHHHh
Q 020843 253 K-MRSWCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 253 ~-v~~~~G~~~~~~fl~~L~~fld 275 (320)
. +.++.|..+.+++.+.|.+.+.
T Consensus 94 ~~~~~~~G~~~~~~l~~~i~~~~~ 117 (121)
T 2djj_A 94 GQPVTYSGSRTVEDLIKFIAENGK 117 (121)
T ss_dssp TSCCCCCCCSCHHHHHHHHHHTSS
T ss_pred CCceEecCCCCHHHHHHHHHhccC
Confidence 3 6678898899888887776543
No 113
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.71 E-value=6.8e-08 Score=77.38 Aligned_cols=97 Identities=7% Similarity=0.102 Sum_probs=73.4
Q ss_pred ccccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc-ceEEEEeecCChHHHHHHHHcCCCCCcEE
Q 020843 165 FNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST-NFIFWQVYDDTSEGKKVCTYYKLDSIPVV 243 (320)
Q Consensus 165 ~~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~-nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i 243 (320)
...+|+++++ ++ +||+|+++||..|+.+...+ ..+.+.+.. ++.|+.+|.+.. ..+++.|++..+|++
T Consensus 13 ~~~~f~~~~~-----~~-vlv~f~a~wC~~C~~~~p~~---~~~~~~~~~~~v~~~~vd~~~~--~~~~~~~~v~~~Pt~ 81 (126)
T 1x5e_A 13 TDENWRELLE-----GD-WMIEFYAPWCPACQNLQPEW---ESFAEWGEDLEVNIAKVDVTEQ--PGLSGRFIINALPTI 81 (126)
T ss_dssp CTTTHHHHTS-----SE-EEEEEECSSCHHHHHHHHHH---HHHHHHHGGGTCEEEEEETTTC--HHHHHHTTCCSSSEE
T ss_pred cHHHHHHHhC-----CC-EEEEEECCCCHHHHHHhHHH---HHHHHHhccCCeEEEEEECcCC--HHHHHHcCCcccCEE
Confidence 3457776542 23 89999999999999997644 344444553 799999988754 358889999999999
Q ss_pred EEEecCCCceEEEEecCCChHHHHHHHHHHHh
Q 020843 244 LVVDPITGQKMRSWCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 244 ~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld 275 (320)
+++ + .|+ +.++.|..+.++|.+.|.+.+.
T Consensus 82 ~~~-~-~G~-~~~~~G~~~~~~l~~~l~~~~~ 110 (126)
T 1x5e_A 82 YHC-K-DGE-FRRYQGPRTKKDFINFISDKEW 110 (126)
T ss_dssp EEE-E-TTE-EEECCSCCCHHHHHHHHHTCGG
T ss_pred EEE-e-CCe-EEEeecCCCHHHHHHHHHHHhh
Confidence 999 3 587 5678899998888877776654
No 114
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=98.70 E-value=2.5e-08 Score=82.91 Aligned_cols=97 Identities=12% Similarity=0.042 Sum_probs=68.1
Q ss_pred HHhcCCeEEEEEeCCCCcchhhhhhcc-------------------------CCCHHHHHHHhc-ceEEEEeecCChHHH
Q 020843 176 ASVQDKWLLVNLQSTKEFSSHMLNRDT-------------------------WANEAVSQTIST-NFIFWQVYDDTSEGK 229 (320)
Q Consensus 176 Ak~~~K~LLV~l~~~~~f~c~~lnRdv-------------------------w~n~~V~~~l~~-nFV~~q~d~~s~eg~ 229 (320)
+..++|++||+|+++||..|+.+...+ -..+.+++++++ ++-++.++.+. ..
T Consensus 34 ~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~--~~ 111 (164)
T 2h30_A 34 YLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYPKLPVVTDN--GG 111 (164)
T ss_dssp GCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCTTSCEEECT--TC
T ss_pred HHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCCcceEEEcC--ch
Confidence 445789999999999999999874221 011233443433 22222233222 24
Q ss_pred HHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHh
Q 020843 230 KVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 230 ~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld 275 (320)
.+++.|++..+|+++|||+ .|+.+.++.|..+.+++.+.|.+.+.
T Consensus 112 ~~~~~~~v~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 112 TIAQNLNISVYPSWALIGK-DGDVQRIVKGSINEAQALALIRNPNA 156 (164)
T ss_dssp HHHHHTTCCSSSEEEEECT-TSCEEEEEESCCCHHHHHHHHHCTTC
T ss_pred HHHHHcCCCccceEEEECC-CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 6788899999999999997 69999999999999888888877664
No 115
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=98.69 E-value=1.1e-07 Score=85.47 Aligned_cols=106 Identities=12% Similarity=0.140 Sum_probs=82.5
Q ss_pred ccccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc---ceEEEEeecCChHHHHHHHHcCCCCCc
Q 020843 165 FNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST---NFIFWQVYDDTSEGKKVCTYYKLDSIP 241 (320)
Q Consensus 165 ~~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~---nFV~~q~d~~s~eg~~~~~~Y~v~~~P 241 (320)
...+|++.+ .+.+|+++|+|+++||..|+.+...+ +.+.+.+.. ++.|..+|.+..+...+++.|++..+|
T Consensus 18 ~~~~f~~~i---~~~~~~vlv~F~a~wC~~C~~~~p~~---~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~~P 91 (244)
T 3q6o_A 18 QADTVRGAV---LGSRSAWAVEFFASWCGHCIAFAPTW---XALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGFP 91 (244)
T ss_dssp CTTTHHHHH---SSCSSEEEEEEECTTCHHHHHHHHHH---HHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCSSS
T ss_pred ChhhHHHHH---hhCCCeEEEEEECCcCHHHHHHHHHH---HHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCccC
Confidence 345676655 45679999999999999999996433 445555555 799999999877788999999999999
Q ss_pred EEEEEecCC----CceEEEEecCCChHHHHHHHHHHHhcCC
Q 020843 242 VVLVVDPIT----GQKMRSWCGMVQPESLLEDLVPFMDGGP 278 (320)
Q Consensus 242 ~i~Iidp~t----G~~v~~~~G~~~~~~fl~~L~~fld~~~ 278 (320)
++.++++-. |..+ .+.| .+++.+.+.|.+.+....
T Consensus 92 t~~~~~~g~~~~~g~~~-~~~g-~~~~~l~~~i~~~l~~~~ 130 (244)
T 3q6o_A 92 TVRFFXAFTXNGSGAVF-PVAG-ADVQTLRERLIDALESHH 130 (244)
T ss_dssp EEEEECTTCCSSSCEEC-CCTT-CCHHHHHHHHHHHHHTCT
T ss_pred EEEEEeCCCcCCCCeeE-ecCC-CCHHHHHHHHHHHHHhcc
Confidence 999999621 2223 4556 699999999999998654
No 116
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.67 E-value=2e-07 Score=77.41 Aligned_cols=95 Identities=15% Similarity=0.199 Sum_probs=72.5
Q ss_pred cCCeEEEEEeCCCCcc-hhhhhhccCCCHHHHHHHhc-----ceEEEEeecCC--------------------------h
Q 020843 179 QDKWLLVNLQSTKEFS-SHMLNRDTWANEAVSQTIST-----NFIFWQVYDDT--------------------------S 226 (320)
Q Consensus 179 ~~K~LLV~l~~~~~f~-c~~lnRdvw~n~~V~~~l~~-----nFV~~q~d~~s--------------------------~ 226 (320)
.+||+||+|+.+||.+ |...-..+ ..+.+-+++ ++.++.++.+. .
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l---~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d 98 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKM---IQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTRE 98 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHH---HHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHH---HHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHH
Confidence 5899999999999998 98764322 233333432 66666666543 1
Q ss_pred HHHHHHHHcCCCCCc---------------EEEEEecCCCceEEEEecCCChHHHHHHHHHHHhcC
Q 020843 227 EGKKVCTYYKLDSIP---------------VVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDGG 277 (320)
Q Consensus 227 eg~~~~~~Y~v~~~P---------------~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~~ 277 (320)
....+++.|++...| +++|||+ .|+.+..+.|..+++++.+.|.+.+..+
T Consensus 99 ~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~ll~~~ 163 (164)
T 2ggt_A 99 EVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGP-DGEFLDYFGQNKRKGEIAASIATHMRPY 163 (164)
T ss_dssp HHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECT-TSCEEEEEETTCCHHHHHHHHHHHHGGG
T ss_pred HHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECC-CCeEEEEeCCCCCHHHHHHHHHHHHHhc
Confidence 234578889998889 8999998 5999999999999999999999998765
No 117
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.66 E-value=2e-07 Score=82.03 Aligned_cols=92 Identities=11% Similarity=0.081 Sum_probs=72.2
Q ss_pred HHhcCCeE-EEEEeCCCCcchhhhhhccCCCHHHHHHHh----cceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCC
Q 020843 176 ASVQDKWL-LVNLQSTKEFSSHMLNRDTWANEAVSQTIS----TNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPIT 250 (320)
Q Consensus 176 Ak~~~K~L-LV~l~~~~~f~c~~lnRdvw~n~~V~~~l~----~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~t 250 (320)
.+..++.+ +|+|+++||..|+.+...+ ..+.+... .++.+..+|.+. ...+++.|++.++|+++|+. .
T Consensus 129 ~~~~~~~~~~v~F~a~wC~~C~~~~p~~---~~l~~~~~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~--~ 201 (226)
T 1a8l_A 129 IRNIDQDVRILVFVTPTCPYCPLAVRMA---HKFAIENTKAGKGKILGDMVEAIE--YPEWADQYNVMAVPKIVIQV--N 201 (226)
T ss_dssp HTTCCSCEEEEEEECSSCTTHHHHHHHH---HHHHHHHHHTTCCCEEEEEEEGGG--CHHHHHHTTCCSSCEEEEEE--T
T ss_pred HHhcCCCcEEEEEeCCCCCccHHHHHHH---HHHHHhcccccCCcEEEEEEEccc--CHHHHHhCCCcccCeEEEEe--C
Confidence 33445555 9999999999999997543 44555554 478999998874 34588899999999988774 6
Q ss_pred CceEEEEecCCChHHHHHHHHHHH
Q 020843 251 GQKMRSWCGMVQPESLLEDLVPFM 274 (320)
Q Consensus 251 G~~v~~~~G~~~~~~fl~~L~~fl 274 (320)
|+.+.++.|..+.++|.+.|.+.+
T Consensus 202 G~~~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 202 GEDRVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp TEEEEEEESCCCHHHHHHHHHHHH
T ss_pred CceeEEEcCCCCHHHHHHHHHHhh
Confidence 888888999999999988888765
No 118
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.66 E-value=2.2e-07 Score=79.20 Aligned_cols=95 Identities=23% Similarity=0.254 Sum_probs=72.4
Q ss_pred hcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh-cceEEEEeecCCh---HHHHHHHHcCCC---------------
Q 020843 178 VQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS-TNFIFWQVYDDTS---EGKKVCTYYKLD--------------- 238 (320)
Q Consensus 178 ~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~-~nFV~~q~d~~s~---eg~~~~~~Y~v~--------------- 238 (320)
-++||+||+|+++||..|..+...+ ..+.+.++ .++.++.++.+.. ...++++.|++.
T Consensus 58 ~~gk~vll~F~a~~C~~C~~~~~~l---~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 134 (186)
T 1jfu_A 58 FRGKTLLVNLWATWCVPCRKEMPAL---DELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQD 134 (186)
T ss_dssp GTTSEEEEEEECTTCHHHHHHHHHH---HHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHH
T ss_pred cCCCEEEEEEEeCCCHhHHHHHHHH---HHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHH
Confidence 3689999999999999999876543 23333343 4677777776643 457788887764
Q ss_pred --------CCcEEEEEecCCCceEEEEecCCC--hHHHHHHHHHHHhc
Q 020843 239 --------SIPVVLVVDPITGQKMRSWCGMVQ--PESLLEDLVPFMDG 276 (320)
Q Consensus 239 --------~~P~i~Iidp~tG~~v~~~~G~~~--~~~fl~~L~~fld~ 276 (320)
.+|+++|||+ .|+.+.++.|..+ .+++++.|...+..
T Consensus 135 ~~~~~~~~~~P~~~lid~-~G~i~~~~~g~~~~~~~~l~~~l~~ll~~ 181 (186)
T 1jfu_A 135 LKAIGRALGMPTSVLVDP-QGCEIATIAGPAEWASEDALKLIRAATGK 181 (186)
T ss_dssp HHTTTCCSSSSEEEEECT-TSBEEEEEESCCCTTSHHHHHHHHHHHC-
T ss_pred hccccccCCCCEEEEECC-CCCEEEEEecCCccCHHHHHHHHHHHhcc
Confidence 8999999997 6999988889764 78899988888754
No 119
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.65 E-value=4.6e-08 Score=78.87 Aligned_cols=92 Identities=11% Similarity=0.115 Sum_probs=69.9
Q ss_pred cCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh--cceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCCceE-E
Q 020843 179 QDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS--TNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKM-R 255 (320)
Q Consensus 179 ~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~--~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v-~ 255 (320)
.+|++||+|+++||..|+.+...+ +.+.+.++ .+++|+.+|.+... .+++.|++..+|+++|+++ .|+.. .
T Consensus 24 ~~~~vlv~f~a~wC~~C~~~~p~~---~~~~~~~~~~~~~~~~~vd~~~~~--~~~~~~~v~~~Pt~~~~~~-g~~~~~~ 97 (133)
T 2dj3_A 24 PKKDVLIEFYAPWCGHCKQLEPIY---TSLGKKYKGQKDLVIAKMDATAND--ITNDQYKVEGFPTIYFAPS-GDKKNPI 97 (133)
T ss_dssp TTSEEEEEECCTTCSHHHHHHHHH---HHHHHHHTTSSSEEEEEECTTTSC--CCCSSCCCSSSSEEEEECT-TCTTSCE
T ss_pred CCCcEEEEEECCCChhHHHHHHHH---HHHHHHhcCCCCEEEEEecCCcCH--HHHhhcCCCcCCEEEEEeC-CCcccce
Confidence 589999999999999999997653 44555555 46999999876543 3566799999999999985 33321 2
Q ss_pred EEe-cCCChHHHHHHHHHHHhc
Q 020843 256 SWC-GMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 256 ~~~-G~~~~~~fl~~L~~fld~ 276 (320)
.+. |..++++|.+.|.+.+..
T Consensus 98 ~~~gg~~~~~~l~~~l~~~~~~ 119 (133)
T 2dj3_A 98 KFEGGNRDLEHLSKFIDEHATK 119 (133)
T ss_dssp ECCSSCCSTTHHHHHHHHHSSS
T ss_pred EecCCCcCHHHHHHHHHHhccc
Confidence 455 668899998888888754
No 120
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=98.65 E-value=7.3e-08 Score=90.09 Aligned_cols=101 Identities=16% Similarity=0.213 Sum_probs=81.0
Q ss_pred ccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEE
Q 020843 167 GSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVV 246 (320)
Q Consensus 167 gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Ii 246 (320)
.+|++++ ++.+|++||+|+++||..|+.+...+ +.+.+.+...+.+..++++..+...+++.|++..+|+++|+
T Consensus 25 ~~f~~~i---~~~~~~vlV~F~A~wC~~C~~~~p~~---~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~~Pt~~~~ 98 (298)
T 3ed3_A 25 KSFDKAI---HNTNYTSLVEFYAPWCGHCKKLSSTF---RKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGFPTLMVF 98 (298)
T ss_dssp HHHHHHH---TSSSSCEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCBSSEEEEE
T ss_pred HHHHHHH---HhCCCeEEEEEECCCCHHHHHHHHHH---HHHHHHccCCcEEEEEEccCccCHHHHHhCCCCccceEEEE
Confidence 4676666 35789999999999999999997644 45666666678888899887777889999999999999999
Q ss_pred ecCCCc-----------------eEEEEecCCChHHHHHHHHHHHh
Q 020843 247 DPITGQ-----------------KMRSWCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 247 dp~tG~-----------------~v~~~~G~~~~~~fl~~L~~fld 275 (320)
.+ |+ ....+.|..+.+.+++.|.+.+.
T Consensus 99 ~~--g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~ 142 (298)
T 3ed3_A 99 RP--PKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIR 142 (298)
T ss_dssp EC--CCC-------------CCCEEEECCSCCSHHHHHHHHHTTCC
T ss_pred EC--CceeecccccccccccccccceeecCCcCHHHHHHHHHHhcc
Confidence 96 44 35567888999988887776654
No 121
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.61 E-value=2.6e-07 Score=81.60 Aligned_cols=100 Identities=8% Similarity=0.197 Sum_probs=78.7
Q ss_pred ccccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcc---eEEEEeecCChHHHHHHHHcCCCCCc
Q 020843 165 FNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTN---FIFWQVYDDTSEGKKVCTYYKLDSIP 241 (320)
Q Consensus 165 ~~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~n---FV~~q~d~~s~eg~~~~~~Y~v~~~P 241 (320)
...+|++++ .++|++||+|+++||..|+.+...+ ..+.+.++.. +.+..+|.+.. ..+++.|++..+|
T Consensus 21 ~~~~~~~~~----~~~~~v~v~F~a~wC~~C~~~~p~~---~~~~~~~~~~~~~~~~~~vd~~~~--~~l~~~~~v~~~P 91 (241)
T 3idv_A 21 NDANFDNFV----ADKDTVLLEFYAPWCGHCKQFAPEY---EKIANILKDKDPPIPVAKIDATSA--SVLASRFDVSGYP 91 (241)
T ss_dssp CTTTHHHHH----TTCSEEEEEEECTTCHHHHHHHHHH---HHHHHHHHTSSSCCCEEEEETTTC--HHHHHHTTCCSSS
T ss_pred cccCHHHHH----hcCCeEEEEEECCCCHHHHHhhHHH---HHHHHHHhhcCCceEEEEEeccCC--HHHHHhcCCCcCC
Confidence 345777665 5689999999999999999997543 3444444444 88999988754 4689999999999
Q ss_pred EEEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 242 VVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 242 ~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
+++++. .|+.+ ...|..+.+++.+.+.+.+..
T Consensus 92 t~~~~~--~g~~~-~~~g~~~~~~l~~~i~~~~~~ 123 (241)
T 3idv_A 92 TIKILK--KGQAV-DYEGSRTQEEIVAKVREVSQP 123 (241)
T ss_dssp EEEEEE--TTEEE-ECCSCSCHHHHHHHHHHHHST
T ss_pred EEEEEc--CCCcc-cccCcccHHHHHHHHhhccCc
Confidence 999997 37776 578999999999988887754
No 122
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.61 E-value=1.7e-07 Score=77.97 Aligned_cols=91 Identities=14% Similarity=0.175 Sum_probs=69.1
Q ss_pred hcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh-cceEEEEeecCC-----------------hHHHHHHHHcCCCC
Q 020843 178 VQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS-TNFIFWQVYDDT-----------------SEGKKVCTYYKLDS 239 (320)
Q Consensus 178 ~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~-~nFV~~q~d~~s-----------------~eg~~~~~~Y~v~~ 239 (320)
-++|++||+|+++||..|..+...+ ..+.+-+. .++.++.++.+. .....+.+.|++..
T Consensus 39 ~~gk~vll~F~~~~C~~C~~~~~~l---~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 115 (158)
T 3hdc_A 39 YRGKIVLVNFWASWCPYCRDEMPSM---DRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANR 115 (158)
T ss_dssp GTTSEEEEEEECTTCHHHHHHHHHH---HHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCS
T ss_pred hCCCEEEEEEECCcCHHHHHHHHHH---HHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCC
Confidence 3689999999999999999876443 22333333 578898888776 22346889999999
Q ss_pred CcEEEEEecCCCceEEEEecCC--ChHHHHHHHHH
Q 020843 240 IPVVLVVDPITGQKMRSWCGMV--QPESLLEDLVP 272 (320)
Q Consensus 240 ~P~i~Iidp~tG~~v~~~~G~~--~~~~fl~~L~~ 272 (320)
+|+++|||+ .|+.+.++.|.. +..++++.+.+
T Consensus 116 ~P~~~lid~-~G~i~~~~~G~~~~~~~~~~~~~~~ 149 (158)
T 3hdc_A 116 LPDTFIVDR-KGIIRQRVTGGIEWDAPKVVSYLKS 149 (158)
T ss_dssp SSEEEEECT-TSBEEEEEESCCCTTSHHHHHHHHT
T ss_pred cceEEEEcC-CCCEEEEEeCCCccchHHHHHHHHh
Confidence 999999997 699999999974 55666666554
No 123
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.60 E-value=2.8e-07 Score=76.92 Aligned_cols=88 Identities=10% Similarity=0.088 Sum_probs=68.6
Q ss_pred hcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc--ceEEEEeecC-------------------ChHH--------
Q 020843 178 VQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST--NFIFWQVYDD-------------------TSEG-------- 228 (320)
Q Consensus 178 ~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~--nFV~~q~d~~-------------------s~eg-------- 228 (320)
-++|++||+|++.||..|..+. +.+.++.++ ++.++.++.+ +.+.
T Consensus 35 ~~gk~~lv~F~~~~C~~C~~~~------~~l~~l~~~~~~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (165)
T 3ha9_A 35 VGGDVVILWFMAAWCPSCVYMA------DLLDRLTEKYREISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANY 108 (165)
T ss_dssp CCSSEEEEEEECTTCTTHHHHH------HHHHHHHHHCTTEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHH
T ss_pred hCCCEEEEEEECCCCcchhhhH------HHHHHHHHHcCCcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHc
Confidence 4789999999999999999885 555665554 6778888776 2211
Q ss_pred -----------HHHHHHcCCCCCcEEEEEecCCCceEEEEecCC-ChHHHHHHHHHHH
Q 020843 229 -----------KKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMV-QPESLLEDLVPFM 274 (320)
Q Consensus 229 -----------~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~-~~~~fl~~L~~fl 274 (320)
..+++.|++..+|+++|||+ .|+.+. .|.. +.+++.+.|.+.+
T Consensus 109 ~~~~~~~~~d~~~~~~~~~v~~~P~~~lid~-~G~i~~--~g~~~~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 109 GDPSWIMVMDDGSLVEKFNVRSIDYIVIMDK-SSNVLY--AGTTPSLGELESVIKSVQ 163 (165)
T ss_dssp SCTTSEEEECCSHHHHHTTCCSSSEEEEEET-TCCEEE--EEESCCHHHHHHHHHHC-
T ss_pred CCCCeeEEeChHHHHHHhCCCCceEEEEEcC-CCcEEE--eCCCCCHHHHHHHHHHHh
Confidence 26788899999999999997 588877 7888 8888888887654
No 124
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=98.59 E-value=2.3e-07 Score=75.31 Aligned_cols=92 Identities=11% Similarity=0.173 Sum_probs=68.1
Q ss_pred hcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc-ceEEEEeecCCh-H-HHHH--------------------HHH
Q 020843 178 VQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST-NFIFWQVYDDTS-E-GKKV--------------------CTY 234 (320)
Q Consensus 178 ~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~-nFV~~q~d~~s~-e-g~~~--------------------~~~ 234 (320)
-++|++||+|+++||..|..+-..+-..+.+.+.+++ ++.++.++.+.. + -.++ .+.
T Consensus 25 ~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 104 (142)
T 3ewl_A 25 LKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQL 104 (142)
T ss_dssp CCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTC
T ss_pred cCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHH
Confidence 3689999999999999999987666666667776654 588888887742 2 2333 337
Q ss_pred cCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHH
Q 020843 235 YKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPF 273 (320)
Q Consensus 235 Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~f 273 (320)
|++..+|+++|||+ .|+.+. +..+.+++.+.|.+.
T Consensus 105 ~~v~~~P~~~lid~-~G~i~~---~~~~~~~l~~~l~~~ 139 (142)
T 3ewl_A 105 YDIRATPTIYLLDG-RKRVIL---KDTSMEQLIDYLATQ 139 (142)
T ss_dssp SCCCSSSEEEEECT-TCBEEE---CSCCHHHHHHHHHC-
T ss_pred cCCCCCCeEEEECC-CCCEEe---cCCCHHHHHHHHHHH
Confidence 89999999999997 587765 457777776666543
No 125
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=98.59 E-value=2.3e-07 Score=77.18 Aligned_cols=90 Identities=14% Similarity=0.217 Sum_probs=68.3
Q ss_pred cCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh-cceEEEEeecCChHHH---------------------HHHHHcC
Q 020843 179 QDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS-TNFIFWQVYDDTSEGK---------------------KVCTYYK 236 (320)
Q Consensus 179 ~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~-~nFV~~q~d~~s~eg~---------------------~~~~~Y~ 236 (320)
.+|++||+|+.+||..|...-..+ ..+.+-++ .++.++.++.+..+.. .+++.|+
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l---~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 110 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLAL---RELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYN 110 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHH---HHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHT
T ss_pred CCCEEEEEEEcCCChhhHHHHHHH---HHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcC
Confidence 579999999999999999765432 12333333 3588888888765421 2788999
Q ss_pred CCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHH
Q 020843 237 LDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVP 272 (320)
Q Consensus 237 v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~ 272 (320)
+..+|+++|||+ .|+.+.++.|..+.++.+..+.+
T Consensus 111 v~~~P~~~lid~-~G~i~~~~~g~~~~e~~~~~~~~ 145 (152)
T 2lrt_A 111 VTNLPSVFLVNR-NNELSARGENIKDLDEAIKKLLE 145 (152)
T ss_dssp CCSCSEEEEEET-TTEEEEETTTCSCHHHHHHHHHG
T ss_pred cccCceEEEECC-CCeEEEecCCHHHHHHHHHHHHh
Confidence 999999999997 59999988898888877766654
No 126
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=98.57 E-value=2.6e-07 Score=93.06 Aligned_cols=118 Identities=10% Similarity=0.069 Sum_probs=91.1
Q ss_pred hhcCCCccc--cccccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc---ceEEEEeecCChHHH
Q 020843 155 SLYRPPFHL--MFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST---NFIFWQVYDDTSEGK 229 (320)
Q Consensus 155 ~lf~Ppf~~--~~~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~---nFV~~q~d~~s~eg~ 229 (320)
.+|.+...+ +...+|++.+ .+.+|++||+|+++||.+|+.+...+ +.+.+.++. ++.|..+|.+..+..
T Consensus 6 ~Ly~~~~~V~~Lt~~~f~~~v---~~~~k~vlV~FyA~WC~pCk~~~P~l---~~la~~~~~~~~~v~~~~VD~d~d~~~ 79 (519)
T 3t58_A 6 VLYSSSDPLTLLDADSVRPTV---LGSSSAWAVEFFASWCGHAIAFAPTW---KELANDVKDWRPALNLAVLDCAEETNS 79 (519)
T ss_dssp CSCCTTSSSEEECTTTHHHHH---SSCSSEEEEEEECTTSHHHHHHHHHH---HHHHHHHGGGTTTEEEEEEETTSGGGH
T ss_pred ccCCCCCCcEECChHHHHHHH---HhCCCeEEEEEECCCCHHHHHHHHHH---HHHHHHhhCcCCcEEEEEEECCccccH
Confidence 455544332 3345776655 35679999999999999999997554 555666665 799999999887888
Q ss_pred HHHHHcCCCCCcEEEEEecC--CCceEEEEecCCChHHHHHHHHHHHhcCC
Q 020843 230 KVCTYYKLDSIPVVLVVDPI--TGQKMRSWCGMVQPESLLEDLVPFMDGGP 278 (320)
Q Consensus 230 ~~~~~Y~v~~~P~i~Iidp~--tG~~v~~~~G~~~~~~fl~~L~~fld~~~ 278 (320)
.+++.|+|..+|+++|+++- .|+.+....|..+++.+.+.|.+++....
T Consensus 80 ~l~~~~~V~~~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~ 130 (519)
T 3t58_A 80 AVCREFNIAGFPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHR 130 (519)
T ss_dssp HHHHHTTCCSBSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHcCCcccCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhcc
Confidence 99999999999999999961 25545555677899999999999998644
No 127
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.56 E-value=5.3e-07 Score=75.42 Aligned_cols=95 Identities=11% Similarity=0.092 Sum_probs=72.3
Q ss_pred cCCeEEEEEeCCCCcc-hhhhhhccCCCHHHHHHHh-----cceEEEEeecCC----h----------------------
Q 020843 179 QDKWLLVNLQSTKEFS-SHMLNRDTWANEAVSQTIS-----TNFIFWQVYDDT----S---------------------- 226 (320)
Q Consensus 179 ~~K~LLV~l~~~~~f~-c~~lnRdvw~n~~V~~~l~-----~nFV~~q~d~~s----~---------------------- 226 (320)
.+||+||+|+.+||.+ |...-..+ ..+.+-++ .++.++.++++. +
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l---~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~ 101 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKL---VQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTK 101 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHH---HHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHH---HHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHH
Confidence 5899999999999998 98764322 23333343 367777776652 2
Q ss_pred HHHHHHHHcCCCCCc---------------EEEEEecCCCceEEEEecCCChHHHHHHHHHHHhcC
Q 020843 227 EGKKVCTYYKLDSIP---------------VVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDGG 277 (320)
Q Consensus 227 eg~~~~~~Y~v~~~P---------------~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~~ 277 (320)
+...+++.|++...| +++|||+ .|+.+..+.|..+++++.+.|...+..+
T Consensus 102 ~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~ll~~~ 166 (171)
T 2rli_A 102 QVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNP-DGLFTDYYGRSRSAEQISDSVRRHMAAF 166 (171)
T ss_dssp HHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECT-TSCEEEEEESSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECC-CCeEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 224678889988777 9999998 6999999999999999999999988754
No 128
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.56 E-value=3.1e-07 Score=75.62 Aligned_cols=88 Identities=16% Similarity=0.242 Sum_probs=68.3
Q ss_pred cCCeEEEEEeCCCCcc--hhhhhhccCCCHHHHHHHh-----cceEEEEeecCChH-----------------------H
Q 020843 179 QDKWLLVNLQSTKEFS--SHMLNRDTWANEAVSQTIS-----TNFIFWQVYDDTSE-----------------------G 228 (320)
Q Consensus 179 ~~K~LLV~l~~~~~f~--c~~lnRdvw~n~~V~~~l~-----~nFV~~q~d~~s~e-----------------------g 228 (320)
++|++||+|+.+||.+ |...-. .+.++.+ .++.++.++.+... .
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~------~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~ 105 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNS------ELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLN 105 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHH------HHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGG
T ss_pred CCCEEEEEEEeCCCCchHHHHHHH------HHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccc
Confidence 6899999999999999 988753 3444332 34888888877543 2
Q ss_pred HHHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 229 KKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 229 ~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
..+++.|++..+|+++|||+ .|+.+.++ .+++++.+.|.+.+.+
T Consensus 106 ~~~~~~~~v~~~P~~~lid~-~G~i~~~~---~~~~~l~~~l~~ll~~ 149 (150)
T 3fw2_A 106 SEVAKQYSIYKIPANILLSS-DGKILAKN---LRGEELKKKIENIVEE 149 (150)
T ss_dssp CHHHHHTTCCSSSEEEEECT-TSBEEEES---CCHHHHHHHHHHHHHH
T ss_pred hHHHHHcCCCccCeEEEECC-CCEEEEcc---CCHHHHHHHHHHHHhc
Confidence 46888999999999999997 59887765 3788888888887753
No 129
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=98.55 E-value=1.7e-07 Score=69.26 Aligned_cols=81 Identities=14% Similarity=0.121 Sum_probs=63.7
Q ss_pred EEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCCceEEEEecCCC
Q 020843 183 LLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQ 262 (320)
Q Consensus 183 LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~ 262 (320)
.+|+|+++||..|+.+...+ +.+.+-+..++.+..+|++... .+++.|++.++|+++| .|+. ++.|..+
T Consensus 4 ~vv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~~~vd~~~~~--~~~~~~~v~~~Pt~~~----~G~~--~~~G~~~ 72 (85)
T 1nho_A 4 NIEVFTSPTCPYCPMAIEVV---DEAKKEFGDKIDVEKIDIMVDR--EKAIEYGLMAVPAIAI----NGVV--RFVGAPS 72 (85)
T ss_dssp CEEEESCSSSCCSTTHHHHH---HHHHHHHCSSCCEEEECTTTCG--GGGGGTCSSCSSEEEE----TTTE--EEECSSC
T ss_pred EEEEEECCCCcchHHHHHHH---HHHHHHhcCCeEEEEEECCCCH--HHHHhCCceeeCEEEE----CCEE--EEccCCC
Confidence 58899999999999997543 3444444457888888887543 5788999999999998 4766 7789889
Q ss_pred hHHHHHHHHHHH
Q 020843 263 PESLLEDLVPFM 274 (320)
Q Consensus 263 ~~~fl~~L~~fl 274 (320)
.+++.+.|.+.+
T Consensus 73 ~~~l~~~l~~~l 84 (85)
T 1nho_A 73 REELFEAINDEM 84 (85)
T ss_dssp CHHHHHHHHHHC
T ss_pred HHHHHHHHHHHh
Confidence 999988888765
No 130
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=98.51 E-value=2.3e-07 Score=75.67 Aligned_cols=80 Identities=13% Similarity=0.172 Sum_probs=61.9
Q ss_pred cCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh-cceEEEEeecCChHH----------------------HHHHHHc
Q 020843 179 QDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS-TNFIFWQVYDDTSEG----------------------KKVCTYY 235 (320)
Q Consensus 179 ~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~-~nFV~~q~d~~s~eg----------------------~~~~~~Y 235 (320)
.+|++||+|+++||..|...-..+-.++.+.+.++ .++.++.++.++... ..+.+.|
T Consensus 30 ~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 109 (142)
T 3eur_A 30 PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLY 109 (142)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhc
Confidence 47999999999999999988766655555666664 578888888776421 1257788
Q ss_pred CCCCCcEEEEEecCCCceEEEEec
Q 020843 236 KLDSIPVVLVVDPITGQKMRSWCG 259 (320)
Q Consensus 236 ~v~~~P~i~Iidp~tG~~v~~~~G 259 (320)
++..+|+++|||+ .|+.+.+..|
T Consensus 110 ~v~~~P~~~lid~-~G~i~~~~~~ 132 (142)
T 3eur_A 110 DLRAIPTLYLLDK-NKTVLLKDAT 132 (142)
T ss_dssp CCTTCSEEEEECT-TCBEEEEEEC
T ss_pred CCCcCCeEEEECC-CCcEEecCCC
Confidence 9999999999997 6988876554
No 131
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=98.51 E-value=5.1e-07 Score=73.64 Aligned_cols=77 Identities=17% Similarity=0.164 Sum_probs=59.1
Q ss_pred HhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh--cceEEEEeecCCh----------------------HHHHHH
Q 020843 177 SVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS--TNFIFWQVYDDTS----------------------EGKKVC 232 (320)
Q Consensus 177 k~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~--~nFV~~q~d~~s~----------------------eg~~~~ 232 (320)
.-++|++||+|+++||..|+.+...+ ..+.+.++ .++.++.++.+.. ....++
T Consensus 25 ~~~gk~vll~F~a~wC~~C~~~~~~l---~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 101 (144)
T 1i5g_A 25 SLAGKTVFFYFSASWCPPSRAFTPQL---IDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLT 101 (144)
T ss_dssp GGTTSEEEEEEECTTCHHHHHHHHHH---HHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHH
T ss_pred HcCCCEEEEEEECCCCHHHHHHHHHH---HHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHH
Confidence 34689999999999999999886543 33444444 4788888887752 256899
Q ss_pred HHcCCCCCcEEEEEecCCCceEEE
Q 020843 233 TYYKLDSIPVVLVVDPITGQKMRS 256 (320)
Q Consensus 233 ~~Y~v~~~P~i~Iidp~tG~~v~~ 256 (320)
+.|++..+|+++|||+..|+.+.+
T Consensus 102 ~~~~v~~~P~~~lid~~~G~i~~~ 125 (144)
T 1i5g_A 102 TGFDVKSIPTLVGVEADSGNIITT 125 (144)
T ss_dssp HHTTCCSSSEEEEEETTTCCEEES
T ss_pred HHcCCCCCCEEEEEECCCCcEEec
Confidence 999999999999999436887755
No 132
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=98.49 E-value=2.5e-07 Score=68.42 Aligned_cols=82 Identities=15% Similarity=0.156 Sum_probs=62.9
Q ss_pred CeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCCceEEEEecC
Q 020843 181 KWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGM 260 (320)
Q Consensus 181 K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~ 260 (320)
+..+|+|+++||..|+.+...+ +.+.+-+..++.+..+|.+... .+++.|++.++|+++| +|+. ++.|.
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~~~vd~~~~~--~~~~~~~v~~~Pt~~~----~G~~--~~~G~ 71 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVV---EEVANEMPDAVEVEYINVMENP--QKAMEYGIMAVPTIVI----NGDV--EFIGA 71 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHH---HHHHHHCSSSEEEEEEESSSSC--CTTTSTTTCCSSEEEE----TTEE--ECCSS
T ss_pred ceEEEEEeCCCCCchHHHHHHH---HHHHHHcCCceEEEEEECCCCH--HHHHHCCCcccCEEEE----CCEE--eeecC
Confidence 4679999999999999996532 2333334447889999886543 4778899999999998 4765 77898
Q ss_pred CChHHHHHHHHHH
Q 020843 261 VQPESLLEDLVPF 273 (320)
Q Consensus 261 ~~~~~fl~~L~~f 273 (320)
.+++++.+.|.+.
T Consensus 72 ~~~~~l~~~l~~~ 84 (85)
T 1fo5_A 72 PTKEALVEAIKKR 84 (85)
T ss_dssp SSSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHh
Confidence 8999888888765
No 133
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=98.49 E-value=3.3e-07 Score=76.69 Aligned_cols=101 Identities=11% Similarity=0.074 Sum_probs=63.5
Q ss_pred cccccHHHHHHHHHhcCCeEEEEEeCCC--CcchhhhhhccCCCHHHHHHHh--cceE--EEEeecCChHHHHHHHHcCC
Q 020843 164 MFNGSFEKAKDAASVQDKWLLVNLQSTK--EFSSHMLNRDTWANEAVSQTIS--TNFI--FWQVYDDTSEGKKVCTYYKL 237 (320)
Q Consensus 164 ~~~gsf~~A~~~Ak~~~K~LLV~l~~~~--~f~c~~lnRdvw~n~~V~~~l~--~nFV--~~q~d~~s~eg~~~~~~Y~v 237 (320)
+-..+|++.+. +++.++|+|...| |.+|+.|. |.+.++.+ .++. |+.+|++ +...+++.|++
T Consensus 22 l~~~~f~~~i~----~~~~~vv~f~~~~~~C~~C~~l~------P~l~~la~~~~~v~~~~~~Vd~d--~~~~la~~~~V 89 (142)
T 2es7_A 22 VEASTVDDWIK----RVGDGVILLSSDPRRTPEVSDNP------VMIAELLREFPQFDWQVAVADLE--QSEAIGDRFNV 89 (142)
T ss_dssp CCCC------------CCSEEEEECCCSCC----CCHH------HHHHHHHHTCTTSCCEEEEECHH--HHHHHHHTTTC
T ss_pred cccccHHHHHH----hCCCEEEEEECCCCCCccHHHHH------HHHHHHHHHhcccceeEEEEECC--CCHHHHHhcCC
Confidence 34468888764 3445788888776 99999985 44555444 3567 8888876 45678999999
Q ss_pred CCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhcCC
Q 020843 238 DSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDGGP 278 (320)
Q Consensus 238 ~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~~~ 278 (320)
.++|+++|+ +.|+.+.++.|..+.+++.+.|.+.+....
T Consensus 90 ~~iPT~~~f--k~G~~v~~~~G~~~~~~l~~~i~~~l~~~~ 128 (142)
T 2es7_A 90 RRFPATLVF--TDGKLRGALSGIHPWAELLTLMRSIVDTPA 128 (142)
T ss_dssp CSSSEEEEE--SCC----CEESCCCHHHHHHHHHHHHC---
T ss_pred CcCCeEEEE--eCCEEEEEEeCCCCHHHHHHHHHHHhcccc
Confidence 999999999 369999999999999999999998886543
No 134
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=98.49 E-value=1.6e-07 Score=75.58 Aligned_cols=89 Identities=12% Similarity=0.127 Sum_probs=62.2
Q ss_pred cHHHHHHHHHhcCCeEEEEEeCC-------CCcchhhhhhccCCCHHHHHHHh---cceEEEEeecCC-----hHHHHHH
Q 020843 168 SFEKAKDAASVQDKWLLVNLQST-------KEFSSHMLNRDTWANEAVSQTIS---TNFIFWQVYDDT-----SEGKKVC 232 (320)
Q Consensus 168 sf~~A~~~Ak~~~K~LLV~l~~~-------~~f~c~~lnRdvw~n~~V~~~l~---~nFV~~q~d~~s-----~eg~~~~ 232 (320)
+|++++..+ .+|+++|+|+++ ||.+|+.+. |.+.++.+ .++.|+.++++. .+...++
T Consensus 14 ~~~~~~~~~--~~~~v~v~F~a~~~~~~~~wC~~C~~~~------p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~ 85 (123)
T 1wou_A 14 EFHRAVEQH--NGKTIFAYFTGSKDAGGKSWCPDCVQAE------PVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFR 85 (123)
T ss_dssp HHHHHHHTT--TTSEEEEEEECCBCTTCCBSCHHHHHHH------HHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHH
T ss_pred HHHHHHHHh--CCCEEEEEEEccCCCCCCCcCHHHHHhh------HHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHH
Confidence 455555432 489999999999 999999996 44555554 479999999853 1234577
Q ss_pred HHcCCCCCcEEEEEecCCCceEEEEecCCChHHHH
Q 020843 233 TYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLL 267 (320)
Q Consensus 233 ~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl 267 (320)
+.|++..+|++++++. |.++....| .+++.+.
T Consensus 86 ~~~~i~~~Pt~~~~~~--~~~~~g~~~-~~~~~l~ 117 (123)
T 1wou_A 86 KNLKVTAVPTLLKYGT--PQKLVESEC-LQANLVE 117 (123)
T ss_dssp HHHCCCSSSEEEETTS--SCEEEGGGG-GCHHHHH
T ss_pred HHCCCCeeCEEEEEcC--CceEecccc-CCHHHHH
Confidence 8899999999999986 444433333 3455433
No 135
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=98.48 E-value=5.5e-07 Score=76.19 Aligned_cols=78 Identities=15% Similarity=0.188 Sum_probs=59.6
Q ss_pred HHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc--ceEEEEeecCChHH----------------------HHH
Q 020843 176 ASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST--NFIFWQVYDDTSEG----------------------KKV 231 (320)
Q Consensus 176 Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~--nFV~~q~d~~s~eg----------------------~~~ 231 (320)
+.-++|++||+|+++||..|..+...+ ..+.+.+++ ++.++.++++.... ..+
T Consensus 44 ~~~~gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 120 (165)
T 3s9f_A 44 DSLSGKTVFFYFSASWCPPCRGFTPQL---VEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEAL 120 (165)
T ss_dssp GGGTTSEEEEEEECTTCHHHHHHHHHH---HHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHH
T ss_pred HHcCCCEEEEEEECCcChhHHHHHHHH---HHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHH
Confidence 444689999999999999999886443 334444443 67777777665432 788
Q ss_pred HHHcCCCCCcEEEEEecCCCceEEE
Q 020843 232 CTYYKLDSIPVVLVVDPITGQKMRS 256 (320)
Q Consensus 232 ~~~Y~v~~~P~i~Iidp~tG~~v~~ 256 (320)
++.|++..+|+++|||+.+|+.+.+
T Consensus 121 ~~~~~v~~~Pt~~lid~~~G~iv~~ 145 (165)
T 3s9f_A 121 TKKYSVESIPTLIGLNADTGDTVTT 145 (165)
T ss_dssp HHHTTCCSSSEEEEEETTTCCEEES
T ss_pred HHHcCCCCCCEEEEEeCCCCEEEec
Confidence 9999999999999999855888765
No 136
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=98.47 E-value=7.4e-07 Score=72.96 Aligned_cols=79 Identities=15% Similarity=0.174 Sum_probs=59.7
Q ss_pred HHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh--cceEEEEeecCCh----------------------HHHHH
Q 020843 176 ASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS--TNFIFWQVYDDTS----------------------EGKKV 231 (320)
Q Consensus 176 Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~--~nFV~~q~d~~s~----------------------eg~~~ 231 (320)
+.-++|++||+|+++||..|+.+...+ ..+.+.++ .++.++.++.+.. ....+
T Consensus 24 ~~~~gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 100 (146)
T 1o8x_A 24 KSLAGKLVFFYFSASWCPPARGFTPQL---IEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKL 100 (146)
T ss_dssp GGGTTCEEEEEEECTTCHHHHHHHHHH---HHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHH
T ss_pred HHhCCCEEEEEEEccCCHHHHHHHHHH---HHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHH
Confidence 345789999999999999999886543 33444444 4777777777652 25689
Q ss_pred HHHcCCCCCcEEEEEecCCCceEEEE
Q 020843 232 CTYYKLDSIPVVLVVDPITGQKMRSW 257 (320)
Q Consensus 232 ~~~Y~v~~~P~i~Iidp~tG~~v~~~ 257 (320)
++.|++..+|+++|||+..|+.+.+.
T Consensus 101 ~~~~~v~~~Pt~~lid~~~G~i~~~~ 126 (146)
T 1o8x_A 101 SKHFNVESIPTLIGVDADSGDVVTTR 126 (146)
T ss_dssp HHHTTCCSSSEEEEEETTTCCEEESC
T ss_pred HHHhCCCCCCEEEEEECCCCeEEEec
Confidence 99999999999999994468877653
No 137
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.46 E-value=5.5e-07 Score=77.28 Aligned_cols=97 Identities=12% Similarity=0.132 Sum_probs=70.4
Q ss_pred cCC-eEEEEEeCCCCcchhhhhhccCCCHHHHHHH-hcceEEEEeecCC--------hH-------------------HH
Q 020843 179 QDK-WLLVNLQSTKEFSSHMLNRDTWANEAVSQTI-STNFIFWQVYDDT--------SE-------------------GK 229 (320)
Q Consensus 179 ~~K-~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l-~~nFV~~q~d~~s--------~e-------------------g~ 229 (320)
.+| ++||+|+++||..|+..-..+ ..+.+-+ +.++.++.++.+. .+ ..
T Consensus 44 ~gk~~vlv~F~a~~C~~C~~~~~~l---~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~ 120 (196)
T 2ywi_A 44 KSDAATVIMFICNHCPFVKHVQHEL---VRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQ 120 (196)
T ss_dssp CCSSEEEEEECCSSCHHHHHHHHHH---HHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSC
T ss_pred CCCCeEEEEEeCCCCccHHHHHHHH---HHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCch
Confidence 566 599999999999998775332 1222222 2358888888742 11 23
Q ss_pred HHHHHcCCCCCcEEEEEecCCCceEEE---------EecCCChHHHHHHHHHHHhcCCC
Q 020843 230 KVCTYYKLDSIPVVLVVDPITGQKMRS---------WCGMVQPESLLEDLVPFMDGGPR 279 (320)
Q Consensus 230 ~~~~~Y~v~~~P~i~Iidp~tG~~v~~---------~~G~~~~~~fl~~L~~fld~~~~ 279 (320)
.+++.|++..+|+++|||+ .|+.+.+ ..|..+++++.+.|.+.+...+.
T Consensus 121 ~~~~~~~v~~~P~~~lid~-~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~~~~ 178 (196)
T 2ywi_A 121 EVAKAYDAACTPDFYIFDR-DLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLEGRPV 178 (196)
T ss_dssp HHHHHHTCCEESEEEEEET-TCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHHTCCC
T ss_pred HHHHHhCCCCCCeEEEEcC-CCeEEEccccCcccccccCccCHHHHHHHHHHHHcCCCC
Confidence 5677888999999999997 5988877 34777899999999999876443
No 138
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=98.46 E-value=6.9e-07 Score=72.56 Aligned_cols=80 Identities=13% Similarity=0.128 Sum_probs=59.6
Q ss_pred HHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh--cceEEEEeecCCh----------------------HHHH
Q 020843 175 AASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS--TNFIFWQVYDDTS----------------------EGKK 230 (320)
Q Consensus 175 ~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~--~nFV~~q~d~~s~----------------------eg~~ 230 (320)
.+.-++|++||+|+++||..|+.+...+ ..+.+.++ .++.++.++.+.. ....
T Consensus 23 l~~~~gk~vll~F~a~wC~~C~~~~~~l---~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (144)
T 1o73_A 23 LGSLVGKTVFLYFSASWCPPCRGFTPVL---AEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSE 99 (144)
T ss_dssp SGGGTTCEEEEEEECTTCHHHHHHHHHH---HHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHH
T ss_pred HHHhCCCEEEEEEECcCCHHHHHHHHHH---HHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHH
Confidence 3445789999999999999999886443 23333343 4677777877653 2567
Q ss_pred HHHHcCCCCCcEEEEEecCCCceEEEE
Q 020843 231 VCTYYKLDSIPVVLVVDPITGQKMRSW 257 (320)
Q Consensus 231 ~~~~Y~v~~~P~i~Iidp~tG~~v~~~ 257 (320)
+++.|++..+|+++|||+..|+.+.+.
T Consensus 100 ~~~~~~v~~~Pt~~lid~~~G~i~~~~ 126 (144)
T 1o73_A 100 LGKTFGVESIPTLITINADTGAIIGTQ 126 (144)
T ss_dssp HHHHHTCCSSSEEEEEETTTCCEEESC
T ss_pred HHHHcCCCCCCEEEEEECCCCeEEecc
Confidence 899999999999999994468877653
No 139
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=98.45 E-value=8.3e-08 Score=76.27 Aligned_cols=86 Identities=13% Similarity=0.069 Sum_probs=61.6
Q ss_pred HHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCCh--HHHHHHHHcCCCCCcEEEEEec
Q 020843 171 KAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTS--EGKKVCTYYKLDSIPVVLVVDP 248 (320)
Q Consensus 171 ~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~--eg~~~~~~Y~v~~~P~i~Iidp 248 (320)
+++..|+..+|..+|+|+++||..|+.|. |.+.++- +.|-++.++.+.. +...+++.|++.++|+++|
T Consensus 3 ~~~~la~~~~k~~vV~F~A~WC~~C~~~~------p~~~~~a-~~~~~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i--- 72 (106)
T 3kp8_A 3 LAVGLAAHLRQIGGTMYGAYWCPHCQDQK------ELFGAAF-DQVPYVECSPNGPGTPQAQECTEAGITSYPTWII--- 72 (106)
T ss_dssp HHHHHHHHHHHHTCEEEECTTCHHHHHHH------HHHGGGG-GGSCEEESCTTCTTSCCCHHHHHTTCCSSSEEEE---
T ss_pred HhhHHHHhcCCCEEEEEECCCCHHHHHHH------HHHHHHH-HhCCEEEEecccccchhHHHHHHcCCeEeCEEEE---
Confidence 45667777888899999999999999995 3333332 3343455554433 4567899999999999777
Q ss_pred CCCceEEEEecCCChHHHHHHH
Q 020843 249 ITGQKMRSWCGMVQPESLLEDL 270 (320)
Q Consensus 249 ~tG~~v~~~~G~~~~~~fl~~L 270 (320)
+|+. +.|..+.+++.+.+
T Consensus 73 -~G~~---~~G~~~~~~l~~~~ 90 (106)
T 3kp8_A 73 -NGRT---YTGVRSLEALAVAS 90 (106)
T ss_dssp -TTEE---EESCCCHHHHHHHH
T ss_pred -CCEE---ecCCCCHHHHHHHh
Confidence 4753 67988888766554
No 140
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.43 E-value=7.4e-07 Score=85.55 Aligned_cols=95 Identities=12% Similarity=0.072 Sum_probs=73.7
Q ss_pred hcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh-cceEEEEeecCC------hH-------------------HHHH
Q 020843 178 VQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS-TNFIFWQVYDDT------SE-------------------GKKV 231 (320)
Q Consensus 178 ~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~-~nFV~~q~d~~s------~e-------------------g~~~ 231 (320)
-++|++||+|+.+||..|+.+...+ ..+.+.++ .++.++.++.+. ++ ...+
T Consensus 80 l~GK~vLl~F~atwC~~C~~~~p~L---~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l 156 (352)
T 2hyx_A 80 LRGKVVLIDFWAYSCINCQRAIPHV---VGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYAT 156 (352)
T ss_dssp GTTSEEEEEEECTTCHHHHHHHHHH---HHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHH
T ss_pred hCCCEEEEEEECCCChhHHHHHHHH---HHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHH
Confidence 3589999999999999999885433 22333333 368888887542 11 1357
Q ss_pred HHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 232 CTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 232 ~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
++.|++..+|+++|||+ .|+.+.++.|..+++++.+.|.+.+..
T Consensus 157 ~~~ygV~~~Pt~~lID~-~G~Iv~~~~G~~~~~~l~~~I~~lL~e 200 (352)
T 2hyx_A 157 WTNYRNRYWPAEYLIDA-TGTVRHIKFGEGDYNVTETLVRQLLND 200 (352)
T ss_dssp HHHTTCCEESEEEEECT-TSBEEEEEESBCCHHHHHHHHHHHHHH
T ss_pred HHHcCCCccCEEEEEeC-CCeEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 77899999999999997 699999999999999999999998864
No 141
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=98.43 E-value=1.3e-06 Score=83.80 Aligned_cols=100 Identities=18% Similarity=0.229 Sum_probs=79.4
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHH------hcceEEEEeecCChHHHHHHHHcCCCC
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTI------STNFIFWQVYDDTSEGKKVCTYYKLDS 239 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l------~~nFV~~q~d~~s~eg~~~~~~Y~v~~ 239 (320)
..+|++++ +.+|++||+|+++||..|+.+...+ +.+.+.+ +.++++..+|.+.. ..+++.|++.+
T Consensus 12 ~~~f~~~~----~~~~~vlV~F~a~wC~~C~~~~p~~---~~~a~~~~~~~~~~~~v~~~~Vd~~~~--~~l~~~~~v~~ 82 (382)
T 2r2j_A 12 TENIDEIL----NNADVALVNFYADWCRFSQMLHPIF---EEASDVIKEEFPNENQVVFARVDCDQH--SDIAQRYRISK 82 (382)
T ss_dssp TTTHHHHH----HHCSEEEEEEECTTCHHHHHHHHHH---HHHHHHHTTCC---CCEEEEEEETTTC--HHHHHHTTCCE
T ss_pred HHHHHHHH----hcCCeEEEEEECCCCHHHHHHHHHH---HHHHHHHHhhcCCCCceEEEEEECCcc--HHHHHhcCCCc
Confidence 45787765 3589999999999999999997543 3455555 33588999998764 45899999999
Q ss_pred CcEEEEEecCCCceEE-EEecCCChHHHHHHHHHHHhc
Q 020843 240 IPVVLVVDPITGQKMR-SWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 240 ~P~i~Iidp~tG~~v~-~~~G~~~~~~fl~~L~~fld~ 276 (320)
||++.++. .|+.+. .+.|..+.+.+++.|...+..
T Consensus 83 ~Pt~~~f~--~G~~~~~~~~G~~~~~~l~~~i~~~~~~ 118 (382)
T 2r2j_A 83 YPTLKLFR--NGMMMKREYRGQRSVKALADYIRQQKSD 118 (382)
T ss_dssp ESEEEEEE--TTEEEEEECCSCCSHHHHHHHHHHHHSC
T ss_pred CCEEEEEe--CCcEeeeeecCcchHHHHHHHHHHhccC
Confidence 99999885 588776 478999999999999888754
No 142
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.43 E-value=1.1e-06 Score=86.93 Aligned_cols=100 Identities=10% Similarity=0.137 Sum_probs=81.7
Q ss_pred ccccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc-ceEEEEeecCChHHHHHHHHcCCCCCcEE
Q 020843 165 FNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST-NFIFWQVYDDTSEGKKVCTYYKLDSIPVV 243 (320)
Q Consensus 165 ~~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~-nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i 243 (320)
...+|++++ ++++++||+|+++||..|+.+...+ +.+.+.++. ++.|..+|.+.. ..+++.|++.+||++
T Consensus 20 ~~~~f~~~~----~~~~~~lv~F~a~wC~~C~~~~p~~---~~~a~~~~~~~v~~~~vd~~~~--~~l~~~~~v~~~Pt~ 90 (504)
T 2b5e_A 20 ATDSFNEYI----QSHDLVLAEFFAPWCGHCKNMAPEY---VKAAETLVEKNITLAQIDCTEN--QDLCMEHNIPGFPSL 90 (504)
T ss_dssp CTTTHHHHH----TTCSEEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTTCEEEEEETTTC--HHHHHHTTCCSSSEE
T ss_pred CHHHHHHHH----hcCCeEEEEEECCCCHHHHHhHHHH---HHHHHHhccCCeEEEEEECCCC--HHHHHhcCCCcCCEE
Confidence 456888876 4689999999999999999997543 455666665 599999998765 569999999999999
Q ss_pred EEEecCCCce--EEEEecCCChHHHHHHHHHHHh
Q 020843 244 LVVDPITGQK--MRSWCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 244 ~Iidp~tG~~--v~~~~G~~~~~~fl~~L~~fld 275 (320)
.++.. |+. +..+.|..+.+.+++.|.+.+.
T Consensus 91 ~~~~~--g~~~~~~~~~G~~~~~~l~~~l~~~~~ 122 (504)
T 2b5e_A 91 KIFKN--SDVNNSIDYEGPRTAEAIVQFMIKQSQ 122 (504)
T ss_dssp EEEET--TCTTCEEECCSCCSHHHHHHHHHHHTS
T ss_pred EEEeC--CccccceeecCCCCHHHHHHHHHHhcC
Confidence 99974 776 7788899999999988887764
No 143
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=98.40 E-value=1.6e-07 Score=85.96 Aligned_cols=100 Identities=13% Similarity=0.198 Sum_probs=73.5
Q ss_pred ccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc--ceEEEEeecCChHHHHHHHHcCCCCCcEEE
Q 020843 167 GSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST--NFIFWQVYDDTSEGKKVCTYYKLDSIPVVL 244 (320)
Q Consensus 167 gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~--nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~ 244 (320)
..|.+++..+ ..+|+++|+|+++||.+|+.+.. .+.++.++ ++.|+.++++. ..++..|++..+|+++
T Consensus 121 ~~f~~~v~~~-~~~k~VvV~Fya~wC~~Ck~l~p------~l~~La~~~~~v~f~kVd~d~---~~l~~~~~I~~~PTll 190 (245)
T 1a0r_P 121 EQFLETIEKE-QKITTIVVHIYEDGIKGCDALNS------SLICLAAEYPMVKFCKIKASN---TGAGDRFSSDVLPTLL 190 (245)
T ss_dssp HHHHHHHHSS-CTTCEEEEEEECTTSTTHHHHHH------HHHHHHHHCTTSEEEEEEHHH---HCCTTSSCTTTCSEEE
T ss_pred HHHHHHHHHh-cCCCEEEEEEECCCChHHHHHHH------HHHHHHHHCCCCEEEEEeCCc---HHHHHHCCCCCCCEEE
Confidence 3565555433 35899999999999999999964 44444442 47888988755 4478899999999999
Q ss_pred EEecCCCceEEEEecCCC---hHHHHHHHHHHHhcCC
Q 020843 245 VVDPITGQKMRSWCGMVQ---PESLLEDLVPFMDGGP 278 (320)
Q Consensus 245 Iidp~tG~~v~~~~G~~~---~~~fl~~L~~fld~~~ 278 (320)
|+. .|+.+.++.|+.+ .+-..+.|..+|.++.
T Consensus 191 ~~~--~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~g 225 (245)
T 1a0r_P 191 VYK--GGELLSNFISVTEQLAEEFFTGDVESFLNEYG 225 (245)
T ss_dssp EEE--TTEEEEEETTGGGGSCTTCCHHHHHHHHHTTT
T ss_pred EEE--CCEEEEEEeCCcccccccccHHHHHHHHHHcC
Confidence 886 5999999888643 2234567888887654
No 144
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.39 E-value=8.9e-07 Score=75.67 Aligned_cols=94 Identities=14% Similarity=0.094 Sum_probs=67.8
Q ss_pred cCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh---cceEEEEeecCC--------hH-------------------H
Q 020843 179 QDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS---TNFIFWQVYDDT--------SE-------------------G 228 (320)
Q Consensus 179 ~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~---~nFV~~q~d~~s--------~e-------------------g 228 (320)
.+|++||+|+++||..|...- +.+.++.+ +.+.++.++.+. .+ .
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~------~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~ 105 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSI------GELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDET 105 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTH------HHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSS
T ss_pred CCCEEEEEEECCCCccHHHHH------HHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCc
Confidence 579999999999999998664 33444433 337778887632 11 2
Q ss_pred HHHHHHcCCCCCcEEEEEecCCCceEEEE--------ecCCChHHHHHHHHHHHhcCCC
Q 020843 229 KKVCTYYKLDSIPVVLVVDPITGQKMRSW--------CGMVQPESLLEDLVPFMDGGPR 279 (320)
Q Consensus 229 ~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~--------~G~~~~~~fl~~L~~fld~~~~ 279 (320)
..+++.|++..+|+++|||+ .|+.+.+. .|..+++++.+.|...+...+.
T Consensus 106 ~~~~~~~~v~~~P~~~lid~-~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~~~~ 163 (188)
T 2cvb_A 106 QEVAKAYRALRTPEVFLFDE-RRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLRGEEP 163 (188)
T ss_dssp SHHHHHTTCCEESEEEEECT-TCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHTTCCC
T ss_pred chHHHHcCCCCCCeEEEECC-CCcEEEEEecCCccccccccCHHHHHHHHHHHHcCCCC
Confidence 35677889999999999997 59887661 1223688999999998876543
No 145
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.39 E-value=6.9e-07 Score=87.71 Aligned_cols=103 Identities=11% Similarity=0.172 Sum_probs=79.7
Q ss_pred cccccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc--ceEEEEeecCChHHHHHHHHcCCCCCc
Q 020843 164 MFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST--NFIFWQVYDDTSEGKKVCTYYKLDSIP 241 (320)
Q Consensus 164 ~~~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~--nFV~~q~d~~s~eg~~~~~~Y~v~~~P 241 (320)
+...+|++.. ...+|.+||+|+++||..|+.+...+ ..+.+.+.. ++++..+|.+.. .++..|++.++|
T Consensus 357 ~~~~~~~~~~---~~~~k~vlv~f~a~wC~~C~~~~p~~---~~l~~~~~~~~~v~~~~id~~~~---~~~~~~~v~~~P 427 (481)
T 3f8u_A 357 VVAENFDEIV---NNENKDVLIEFYAPWCGHCKNLEPKY---KELGEKLSKDPNIVIAKMDATAN---DVPSPYEVRGFP 427 (481)
T ss_dssp ECTTTHHHHH---TCTTCEEEEEEECTTBHHHHHHHHHH---HHHHHHTTTCSSEEEEEEETTSS---CCCTTCCCCSSS
T ss_pred ecccCHHHHh---hcCCCcEEEEEecCcChhHHHhhHHH---HHHHHHhccCCCEEEEEEECCch---hhHhhCCCcccC
Confidence 3445777655 45799999999999999999997544 455555554 699999998775 366789999999
Q ss_pred EEEEEecCCCc-eEEEEecCCChHHHHHHHHHHHhc
Q 020843 242 VVLVVDPITGQ-KMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 242 ~i~Iidp~tG~-~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
++++++. .|+ .+.++.|..+.++|++.|.+.+..
T Consensus 428 t~~~~~~-~~~~~~~~~~G~~~~~~l~~~l~~~~~~ 462 (481)
T 3f8u_A 428 TIYFSPA-NKKLNPKKYEGGRELSDFISYLQREATN 462 (481)
T ss_dssp EEEEECT-TCTTSCEECCSCCSHHHHHHHHHHHCSS
T ss_pred EEEEEeC-CCeEeeeEeCCCCCHHHHHHHHHHhcCC
Confidence 9999985 344 266778999999988888876543
No 146
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.39 E-value=5e-07 Score=88.71 Aligned_cols=103 Identities=14% Similarity=0.200 Sum_probs=82.4
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEE
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLV 245 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~I 245 (320)
..+|++++ .....++++||+|+++||..|+.|...+ +.+.+.++..+.|..+|.+.. ..+++.|++.++|++.+
T Consensus 8 ~~~f~~~i-~~~~~~~~~lv~F~a~wC~~C~~~~p~~---~~~a~~~~~~v~~~~vd~~~~--~~l~~~~~v~~~Ptl~~ 81 (481)
T 3f8u_A 8 DDNFESRI-SDTGSAGLMLVEFFAPWCGHAKRLAPEY---EAAATRLKGIVPLAKVDCTAN--TNTCNKYGVSGYPTLKI 81 (481)
T ss_dssp TTTHHHHT-TCCSSSSEEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTCCEEEEETTTC--HHHHHHTTCCEESEEEE
T ss_pred HHHHHHHH-HhCCCCCeEEEEEECCCCHHHHHhHHHH---HHHHHHhcCceEEEEEECCCC--HHHHHhcCCCCCCEEEE
Confidence 45787776 2223459999999999999999997643 566666666688888888764 46899999999999999
Q ss_pred EecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 246 VDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 246 idp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
+. .|+.+..+.|..+.+.+++.|.+.+..
T Consensus 82 ~~--~g~~~~~~~G~~~~~~l~~~~~~~~~~ 110 (481)
T 3f8u_A 82 FR--DGEEAGAYDGPRTADGIVSHLKKQAGP 110 (481)
T ss_dssp EE--TTEEEEECCSCSSHHHHHHHHHHHTSC
T ss_pred Ee--CCceeeeecCccCHHHHHHHHHhhccc
Confidence 95 588888889999999999988887653
No 147
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.38 E-value=2.7e-06 Score=75.01 Aligned_cols=98 Identities=10% Similarity=0.193 Sum_probs=75.2
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcc---eEEEEeecCChHHHHHHHHcCCCCCcE
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTN---FIFWQVYDDTSEGKKVCTYYKLDSIPV 242 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~n---FV~~q~d~~s~eg~~~~~~Y~v~~~P~ 242 (320)
..+|++++ ..+|.++|+|+++||..|+.+...+ ..+.+.++.. +.|..+|.+.. ..+++.|++.++|+
T Consensus 137 ~~~~~~~~----~~~~~~~v~f~a~wC~~C~~~~p~~---~~~a~~~~~~~~~v~~~~vd~~~~--~~l~~~~~v~~~Pt 207 (241)
T 3idv_A 137 KENFDEVV----NDADIILVEFYAPWCGHCKKLAPEY---EKAAKELSKRSPPIPLAKVDATAE--TDLAKRFDVSGYPT 207 (241)
T ss_dssp TTTHHHHH----HHCSEEEEEEECTTCTGGGGTHHHH---HHHHHHHHTSSSCCCEEEEETTTC--HHHHHHTTCCSSSE
T ss_pred HHHHHHhh----ccCCeEEEEEECCCCHHHHHhHHHH---HHHHHHHhccCCcEEEEEEECCCC--HHHHHHcCCcccCE
Confidence 45777666 4578999999999999999986432 2344444432 88888888754 35899999999999
Q ss_pred EEEEecCCCceEEEEecCCChHHHHHHHHHHHh
Q 020843 243 VLVVDPITGQKMRSWCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 243 i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld 275 (320)
++++.. |+.+. ..|..+.+++++.|.+.+.
T Consensus 208 ~~~~~~--g~~~~-~~g~~~~~~l~~~l~~~~~ 237 (241)
T 3idv_A 208 LKIFRK--GRPYD-YNGPREKYGIVDYMIEQSG 237 (241)
T ss_dssp EEEEET--TEEEE-CCSCCSHHHHHHHHHHHTT
T ss_pred EEEEEC--CeEEE-ecCCCCHHHHHHHHHhhhC
Confidence 999983 77665 7898999999888887654
No 148
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.36 E-value=2.2e-06 Score=71.42 Aligned_cols=93 Identities=15% Similarity=0.191 Sum_probs=66.9
Q ss_pred cCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh-cceEEEEeecC--------Ch-HHHHHHH-Hc------------
Q 020843 179 QDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS-TNFIFWQVYDD--------TS-EGKKVCT-YY------------ 235 (320)
Q Consensus 179 ~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~-~nFV~~q~d~~--------s~-eg~~~~~-~Y------------ 235 (320)
++||+||+|+.+||..|...-..+ ..+.+-++ .++.++.++.+ +. +..++++ .|
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l---~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 107 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEM---NQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDV 107 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHH---HHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBS
T ss_pred CCCEEEEEEEeccCCccHHHHHHH---HHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeecc
Confidence 589999999999999998764332 12222233 35888888764 22 2345555 43
Q ss_pred -----------------CC--CCCc---EEEEEecCCCceEEEEecCCChHHHHHHHHHHHh
Q 020843 236 -----------------KL--DSIP---VVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 236 -----------------~v--~~~P---~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld 275 (320)
++ ..+| +++|||+ .|+.+.++.|..+++++.+.|.+.+.
T Consensus 108 ~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~-~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (170)
T 2p5q_A 108 NGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNK-DGQVVDRYYPTTSPLSLERDIKQLLE 168 (170)
T ss_dssp SSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECT-TSCEEEEECTTSCGGGGHHHHHHHTT
T ss_pred CCCchHHHHHHHHhcCCCccCCcccccccEEEECC-CCCEEEeeCCCCCHHHHHHHHHHHhh
Confidence 23 5678 9999997 69999999999999999888888765
No 149
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=98.35 E-value=1.3e-06 Score=63.47 Aligned_cols=74 Identities=16% Similarity=0.201 Sum_probs=57.1
Q ss_pred EEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCCceEEEEecCC-
Q 020843 183 LLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMV- 261 (320)
Q Consensus 183 LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~- 261 (320)
+.|+|+++||..|+.+...+ +.+.+.++.++.+..++ ...+++.|++.++|+++| .|+.+.+ |..
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l---~~~~~~~~~~~~~~~v~-----~~~~~~~~~v~~~Pt~~~----~G~~~~~--G~~~ 67 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNA---REAVKELGIDAEFEKIK-----EMDQILEAGLTALPGLAV----DGELKIM--GRVA 67 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHH---HHHHHHTTCCEEEEEEC-----SHHHHHHHTCSSSSCEEE----TTEEEEC--SSCC
T ss_pred cEEEEEcCCChhHHHHHHHH---HHHHHHcCCceEEEEec-----CHHHHHHCCCCcCCEEEE----CCEEEEc--CCCC
Confidence 46899999999999997654 45555556678888887 346788999999999998 5877655 887
Q ss_pred ChHHHHHHH
Q 020843 262 QPESLLEDL 270 (320)
Q Consensus 262 ~~~~fl~~L 270 (320)
+.+++.+.|
T Consensus 68 ~~~~l~~~l 76 (77)
T 1ilo_A 68 SKEEIKKIL 76 (77)
T ss_dssp CHHHHHHHC
T ss_pred CHHHHHHHh
Confidence 888776543
No 150
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.35 E-value=2.4e-06 Score=73.66 Aligned_cols=94 Identities=12% Similarity=0.113 Sum_probs=68.2
Q ss_pred cCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh-cceEEEEeecC--------Ch-HHHHHH-HH-------------
Q 020843 179 QDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS-TNFIFWQVYDD--------TS-EGKKVC-TY------------- 234 (320)
Q Consensus 179 ~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~-~nFV~~q~d~~--------s~-eg~~~~-~~------------- 234 (320)
++||+||+|+.+||..|...-..+ ..+.+-++ .++.++.++.+ ++ +..+++ +.
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l---~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~ 123 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETA---TTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINV 123 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHH---HHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBS
T ss_pred CCCEEEEEEecCCCCccHHHHHHH---HHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeeccc
Confidence 689999999999999997654322 12222232 35778887765 32 234455 22
Q ss_pred ----------------cCCCCCc------EEEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 235 ----------------YKLDSIP------VVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 235 ----------------Y~v~~~P------~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
|++..+| +++|||+ .|+.+.++.|..+++++.+.|.+.+..
T Consensus 124 ~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~-~G~i~~~~~g~~~~~~l~~~i~~ll~~ 186 (190)
T 2vup_A 124 NGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDR-DGVPVERFSPGASVKDIEKKLIPLLES 186 (190)
T ss_dssp SSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECT-TSCEEEEECTTCCHHHHHHHHHHHHHC
T ss_pred CcccccHHHHHHHhhcCCcCCCccccccceEEEECC-CCcEEEEECCCCCHHHHHHHHHHHHhh
Confidence 3556688 9999997 699999999999999999999998864
No 151
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=98.35 E-value=3.1e-06 Score=68.53 Aligned_cols=85 Identities=11% Similarity=0.089 Sum_probs=66.4
Q ss_pred hcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh-cceEEEEeecCChHH--HHHHHHcCCC-CCcEEEEEecCCCce
Q 020843 178 VQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS-TNFIFWQVYDDTSEG--KKVCTYYKLD-SIPVVLVVDPITGQK 253 (320)
Q Consensus 178 ~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~-~nFV~~q~d~~s~eg--~~~~~~Y~v~-~~P~i~Iidp~tG~~ 253 (320)
+++|+++|++|++||++|.++- +.+.++.+ .+.-|+.+|++...- ..++..|+|. ..|+++++- .|+.
T Consensus 22 ~~~~~vvi~khatwCgpc~~~~------~~~e~~~~~~~v~~~~vdVde~r~~Sn~IA~~~~V~h~sPq~il~k--~G~~ 93 (112)
T 3iv4_A 22 EENKYVFVLKHSETCPISANAY------DQFNKFLYERDMDGYYLIVQQERDLSDYIAKKTNVKHESPQAFYFV--NGEM 93 (112)
T ss_dssp HHCSEEEEEEECTTCHHHHHHH------HHHHHHHHHHTCCEEEEEGGGGHHHHHHHHHHHTCCCCSSEEEEEE--TTEE
T ss_pred hcCCCEEEEEECCcCHhHHHHH------HHHHHHhccCCceEEEEEeecCchhhHHHHHHhCCccCCCeEEEEE--CCEE
Confidence 3499999999999999999985 45555543 467788888876543 5689999998 599999996 6999
Q ss_pred EEEE-ecCCChHHHHHHH
Q 020843 254 MRSW-CGMVQPESLLEDL 270 (320)
Q Consensus 254 v~~~-~G~~~~~~fl~~L 270 (320)
+++. .|.++.+.+.+.|
T Consensus 94 v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 94 VWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp EEEEEGGGCSHHHHHHHT
T ss_pred EEEeeccccCHHHHHHhh
Confidence 9774 5678888665543
No 152
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.35 E-value=1.7e-06 Score=72.37 Aligned_cols=93 Identities=12% Similarity=0.167 Sum_probs=65.7
Q ss_pred cCCe-EEEEEe-CCCCcchhhhhhccCCCHHHHHHH-hcceEEEEeecCChH-------------------HHHHHHHcC
Q 020843 179 QDKW-LLVNLQ-STKEFSSHMLNRDTWANEAVSQTI-STNFIFWQVYDDTSE-------------------GKKVCTYYK 236 (320)
Q Consensus 179 ~~K~-LLV~l~-~~~~f~c~~lnRdvw~n~~V~~~l-~~nFV~~q~d~~s~e-------------------g~~~~~~Y~ 236 (320)
.+|+ ++|+|+ +.||..|...-..+ ..+.+-+ ..++.++.++.++++ ...+++.|+
T Consensus 27 ~gk~~vvl~F~~a~~C~~C~~~~~~l---~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 103 (161)
T 3drn_A 27 IGKHNIVLYFYPKDDTPGSTREASAF---RDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYG 103 (161)
T ss_dssp TTTSEEEEEECSCTTCHHHHHHHHHH---HHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTT
T ss_pred cCCCCEEEEEEcCCCCCchHHHHHHH---HHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcC
Confidence 4777 999999 99999998875433 2222333 345888888887643 345677888
Q ss_pred CCC----CcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHh
Q 020843 237 LDS----IPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 237 v~~----~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld 275 (320)
+.. +|+++|||+ .|+.+..+.|...++..++.+.+.++
T Consensus 104 v~~~~~~~P~~~lid~-~G~i~~~~~g~~~~~~~~~~il~~l~ 145 (161)
T 3drn_A 104 AKGFILPARITFVIDK-KGIIRHIYNSQMNPANHVNEALKALK 145 (161)
T ss_dssp CCCSSSCCCEEEEECT-TSBEEEEEECSSCTTHHHHHHHHHHH
T ss_pred CCCcCcccceEEEECC-CCEEEEEEecCCCCCcCHHHHHHHHH
Confidence 888 999999998 69999999885544444444444444
No 153
>3bq3_A Defective in cullin neddylation protein 1; ubiquitin, ubiquitination,SCF,cullin, E3 E2, cell cycle, protein degradation, ligase; 1.90A {Saccharomyces cerevisiae} PDB: 2is9_A* 3o2p_A 3o6b_A 3tdi_B 2l4e_A 2l4f_A
Probab=98.34 E-value=2e-07 Score=86.53 Aligned_cols=44 Identities=18% Similarity=0.412 Sum_probs=40.7
Q ss_pred cchHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCCC
Q 020843 8 NDKQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNE 52 (320)
Q Consensus 8 ~~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 52 (320)
..++++|.+|++| ||+++.+|++||++++||||.|++.||+.+.
T Consensus 13 ~~~~~~i~qF~~i-Tg~~~~~A~~~L~~~~WdLe~Al~~ff~~~~ 56 (270)
T 3bq3_A 13 SPEQEAIESFTSL-TKCDPKVSRKYLQRNHWNINYALNDYYDKEI 56 (270)
T ss_dssp CHHHHHHHHHHHH-HCCCHHHHHHHHHTTTTCHHHHHHHHHHHHC
T ss_pred cchHHHHHHHHHH-cCCCHHHHHHHHHHcCCCHHHHHHHHHhCcc
Confidence 3478999999999 9999999999999999999999999998754
No 154
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.34 E-value=1.7e-06 Score=74.83 Aligned_cols=93 Identities=13% Similarity=0.087 Sum_probs=68.6
Q ss_pred cCCeEEEEEe-CCCCcchhhhhhccCCCHHHHHHHh-cceEEEEeecCChH-----------------------HHHHHH
Q 020843 179 QDKWLLVNLQ-STKEFSSHMLNRDTWANEAVSQTIS-TNFIFWQVYDDTSE-----------------------GKKVCT 233 (320)
Q Consensus 179 ~~K~LLV~l~-~~~~f~c~~lnRdvw~n~~V~~~l~-~nFV~~q~d~~s~e-----------------------g~~~~~ 233 (320)
.+|+++|+|+ .+||..|...-..+ ..+.+-++ .++.++.++.++++ ...+.+
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l---~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 120 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAF---SKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQ 120 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHH---HHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHH
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHH---HHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHH
Confidence 4799999999 99999998764322 11222233 36778888776532 234666
Q ss_pred HcCCC-----CCcEEEEEecCCCceEEEEecCC----ChHHHHHHHHHHHh
Q 020843 234 YYKLD-----SIPVVLVVDPITGQKMRSWCGMV----QPESLLEDLVPFMD 275 (320)
Q Consensus 234 ~Y~v~-----~~P~i~Iidp~tG~~v~~~~G~~----~~~~fl~~L~~fld 275 (320)
.|++. .+|+++|||+ .|+.+..+.|.. +++++++.|...+.
T Consensus 121 ~~~v~~~~g~~~P~~~lid~-~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 121 AAGVLNADGVADRVTFIVDP-NNEIQFVSATAGSVGRNVDEVLRVLDALQS 170 (195)
T ss_dssp HHTCBCTTSSBCEEEEEECT-TSBEEEEEEECTTCCCCHHHHHHHHHHHHC
T ss_pred HhCCcccCCCccceEEEEcC-CCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 78888 8999999997 599998888764 68889888888765
No 155
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.33 E-value=5.1e-07 Score=73.66 Aligned_cols=83 Identities=18% Similarity=0.245 Sum_probs=61.0
Q ss_pred hcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh----cceEEEEeecCChH------------------------HH
Q 020843 178 VQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS----TNFIFWQVYDDTSE------------------------GK 229 (320)
Q Consensus 178 ~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~----~nFV~~q~d~~s~e------------------------g~ 229 (320)
-++|++||+|+++||.+|...- +.+.++.+ .++.++.++.+... ..
T Consensus 30 ~~gk~vll~F~a~wC~~C~~~~------~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 103 (143)
T 4fo5_A 30 QLGRYTLLNFWAAYDAESRARN------VQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKES 103 (143)
T ss_dssp SSCCEEEEEEECTTCHHHHHHH------HHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGS
T ss_pred hCCCEEEEEEEcCcCHHHHHHH------HHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccch
Confidence 3689999999999999998874 55666554 35888888776422 13
Q ss_pred HHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHH
Q 020843 230 KVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDL 270 (320)
Q Consensus 230 ~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L 270 (320)
.+++.|++..+|+++|||+ .|+.+.+. ..++++.+.|
T Consensus 104 ~~~~~~~v~~~P~~~lid~-~G~i~~~~---~~~~~l~~~l 140 (143)
T 4fo5_A 104 ELYKKYDLRKGFKNFLIND-EGVIIAAN---VTPEKLTEIL 140 (143)
T ss_dssp HHHHHTTGGGCCCEEEECT-TSBEEEES---CCHHHHHHHH
T ss_pred HHHHHcCCCCCCcEEEECC-CCEEEEcc---CCHHHHHHHH
Confidence 5778899999999999997 59887663 3455544444
No 156
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.32 E-value=1.5e-06 Score=73.27 Aligned_cols=93 Identities=16% Similarity=0.222 Sum_probs=64.3
Q ss_pred cCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh-cceEEEEeecC--------Ch-HHHHHH----------------
Q 020843 179 QDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS-TNFIFWQVYDD--------TS-EGKKVC---------------- 232 (320)
Q Consensus 179 ~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~-~nFV~~q~d~~--------s~-eg~~~~---------------- 232 (320)
.+||+||+|+++||.+|. .-..+ ..+.+-++ .++.++.++.+ +. +..+++
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l---~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~ 106 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKEL---EALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDV 106 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHH---HHHHHHHGGGTEEEEEEEECSCC------------------CCCSCBBCCCBS
T ss_pred CCCEEEEEEEecCCCcch-hHHHH---HHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccC
Confidence 589999999999999998 43211 12222232 35888888753 21 223333
Q ss_pred --------------HHcCCCCCc------EEEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 233 --------------TYYKLDSIP------VVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 233 --------------~~Y~v~~~P------~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
+.|++..+| +++|||+ .|+.+.++.|..+++++.+.|.+.+.+
T Consensus 107 ~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~-~G~i~~~~~g~~~~~~l~~~i~~ll~~ 169 (171)
T 3cmi_A 107 NGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDK-KGKVYERYSSLTKPSSLSETIEELLKE 169 (171)
T ss_dssp SSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECS-SSCEEEEECTTSCGGGGHHHHHHHHTC
T ss_pred CCccchHHHHHHHhccCCcCCCCcccccceEEEECC-CCCEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 236677899 9999997 699999999999999999999888764
No 157
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=98.32 E-value=1.3e-06 Score=78.13 Aligned_cols=99 Identities=13% Similarity=0.229 Sum_probs=72.2
Q ss_pred ccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc--ceEEEEeecCChHHHHHHHHcCCCCCcEEE
Q 020843 167 GSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST--NFIFWQVYDDTSEGKKVCTYYKLDSIPVVL 244 (320)
Q Consensus 167 gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~--nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~ 244 (320)
.+|.+++..+ ..+|+++|+|+++||..|+.|. +.+.++.+. ++.|+.++++ ...++..|++..+|+++
T Consensus 108 ~~f~~~v~~~-~~~k~vvV~F~a~wC~~C~~l~------p~l~~la~~~~~v~f~~vd~~---~~~l~~~~~i~~~PTl~ 177 (217)
T 2trc_P 108 EQFLETIEKE-QKVTTIVVNIYEDGVRGCDALN------SSLECLAAEYPMVKFCKIRAS---NTGAGDRFSSDVLPTLL 177 (217)
T ss_dssp HHHHHHHHHS-CTTCEEEEEEECTTSTTHHHHH------HHHHHHHTTCTTSEEEEEEHH---HHTCSTTSCGGGCSEEE
T ss_pred HHHHHHHHhc-CCCcEEEEEEECCCCccHHHHH------HHHHHHHHHCCCeEEEEEECC---cHHHHHHCCCCCCCEEE
Confidence 4666665433 2459999999999999999996 444555543 5789999886 44578889999999999
Q ss_pred EEecCCCceEEEEecCCCh---HHHHHHHHHHHhcC
Q 020843 245 VVDPITGQKMRSWCGMVQP---ESLLEDLVPFMDGG 277 (320)
Q Consensus 245 Iidp~tG~~v~~~~G~~~~---~~fl~~L~~fld~~ 277 (320)
|+. .|+.+.++.|..+. +-..+.|..+|.++
T Consensus 178 ~~~--~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 178 VYK--GGELISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp EEE--TTEEEEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred EEE--CCEEEEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 996 69999888886543 22235566666654
No 158
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=98.31 E-value=2.3e-06 Score=80.98 Aligned_cols=96 Identities=15% Similarity=0.192 Sum_probs=73.3
Q ss_pred ccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhc------cCCCHHHHHHHhc-ceEEEEeecCChHHHHHHHHcCCCC
Q 020843 167 GSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRD------TWANEAVSQTIST-NFIFWQVYDDTSEGKKVCTYYKLDS 239 (320)
Q Consensus 167 gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRd------vw~n~~V~~~l~~-nFV~~q~d~~s~eg~~~~~~Y~v~~ 239 (320)
.+|++++ ++++++||+|+++||. |+.+... +| +.+.+.+++ ++.+..+|.+.. ..+++.|++.+
T Consensus 19 ~~f~~~i----~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~--~~~a~~~~~~~v~~~~Vd~~~~--~~l~~~~~v~~ 89 (350)
T 1sji_A 19 KNFKQVL----KKYDVLCLYYHESVSS-DKVAQKQFQLKEIVL--ELVAQVLEHKDIGFVMVDAKKE--AKLAKKLGFDE 89 (350)
T ss_dssp HHHHHHH----TTCSEEEEEEECCSCS-SSTTSHHHHHHHHHH--HHHHHHGGGSSEEEEEEETTTT--HHHHHHHTCCS
T ss_pred HHHHHHH----hhCCeEEEEEECCCCc-chhhCchhhhhhHHH--HHHHHHHhhcCcEEEEEeCCCC--HHHHHhcCCCc
Confidence 4566655 4589999999999999 9766433 13 356666665 599999998765 45899999999
Q ss_pred CcEEEEEecCCCceEEEEecCCChHHHHHHHHHHH
Q 020843 240 IPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFM 274 (320)
Q Consensus 240 ~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fl 274 (320)
||++.++. .|+ +..+.|..+.+.+.+.|.+.+
T Consensus 90 ~Pt~~~~~--~g~-~~~~~G~~~~~~l~~~i~~~~ 121 (350)
T 1sji_A 90 EGSLYVLK--GDR-TIEFDGEFAADVLVEFLLDLI 121 (350)
T ss_dssp TTEEEEEE--TTE-EEEECSCCCHHHHHHHHHTTS
T ss_pred cceEEEEE--CCc-EEEecCCCCHHHHHHHHHHhc
Confidence 99999994 477 557889999988777766554
No 159
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=98.30 E-value=1.3e-06 Score=82.42 Aligned_cols=97 Identities=13% Similarity=0.127 Sum_probs=74.1
Q ss_pred ccccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc--ceEEEEeecCChHHHHHHHHcCCCCCcE
Q 020843 165 FNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST--NFIFWQVYDDTSEGKKVCTYYKLDSIPV 242 (320)
Q Consensus 165 ~~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~--nFV~~q~d~~s~eg~~~~~~Y~v~~~P~ 242 (320)
...+|++.+ ...+|.+||+|+++||..|+.+...+ ..+.+.++. ++++..+|.+... +..|++.+||+
T Consensus 255 ~~~~f~~~~---~~~~k~~lv~f~a~wC~~C~~~~p~~---~~la~~~~~~~~v~~~~vd~~~~~----~~~~~v~~~Pt 324 (361)
T 3uem_A 255 VGKNFEDVA---FDEKKNVFVEFYAPWCGHCKQLAPIW---DKLGETYKDHENIVIAKMDSTANE----VEAVKVHSFPT 324 (361)
T ss_dssp CTTTHHHHH---TCTTCEEEEEEECTTCHHHHHHHHHH---HHHHHHTTTCSSEEEEEEETTTCB----CSSCCCCSSSE
T ss_pred ecCchhhhc---ccCCCcEEEEEecCcCHhHHHHHHHH---HHHHHHhccCCcEEEEEEECCccc----hhhcCCcccCe
Confidence 345676655 46799999999999999999996433 344555554 4999999987765 56899999999
Q ss_pred EEEEecCCCceEEEEecCCChHHHHHHHH
Q 020843 243 VLVVDPITGQKMRSWCGMVQPESLLEDLV 271 (320)
Q Consensus 243 i~Iidp~tG~~v~~~~G~~~~~~fl~~L~ 271 (320)
+.++....|+.+.++.|..+.+.|++.|.
T Consensus 325 ~~~~~~~~~~~~~~~~G~~~~~~l~~~l~ 353 (361)
T 3uem_A 325 LKFFPASADRTVIDYNGERTLDGFKKFLE 353 (361)
T ss_dssp EEEECSSSSCCCEECCSCSSHHHHHHHHT
T ss_pred EEEEECCCCcceeEecCCCCHHHHHHHHH
Confidence 99997644566778889888887766554
No 160
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=98.30 E-value=1.7e-06 Score=70.17 Aligned_cols=98 Identities=17% Similarity=0.282 Sum_probs=70.7
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc--ceEEEEeecCChHHHHHHHHcCCCCCcEE
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST--NFIFWQVYDDTSEGKKVCTYYKLDSIPVV 243 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~--nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i 243 (320)
..+|.+.+..+ ..+++++|+|+++||.+|+.|. |.+.++-++ +..|+++|++.. +..|++..+|++
T Consensus 10 ~~~f~~~v~~~-~~~~~vvv~F~a~wc~~C~~~~------p~l~~la~~~~~v~f~kvd~d~~-----~~~~~v~~~PT~ 77 (118)
T 3evi_A 10 GNQYVNEVTNA-EEDVWVIIHLYRSSIPMCLLVN------QHLSLLARKFPETKFVKAIVNSC-----IQHYHDNCLPTI 77 (118)
T ss_dssp GGGHHHHTTTC-CTTCEEEEEEECTTSHHHHHHH------HHHHHHHHHCTTSEEEEEEGGGT-----STTCCGGGCSEE
T ss_pred HHHHHHHHHhc-CCCCeEEEEEeCCCChHHHHHH------HHHHHHHHHCCCCEEEEEEhHHh-----HHHCCCCCCCEE
Confidence 45666655432 2356999999999999999995 555555543 467889998863 578999999999
Q ss_pred EEEecCCCceEEEEecCCCh--HHH-HHHHHHHHhcC
Q 020843 244 LVVDPITGQKMRSWCGMVQP--ESL-LEDLVPFMDGG 277 (320)
Q Consensus 244 ~Iidp~tG~~v~~~~G~~~~--~~f-l~~L~~fld~~ 277 (320)
+++- .|+.+.++.|..+- ++| .+.|..+|.++
T Consensus 78 ~~fk--~G~~v~~~~G~~~~gg~~~~~~~le~~L~~~ 112 (118)
T 3evi_A 78 FVYK--NGQIEAKFIGIIECGGINLKLEELEWKLAEV 112 (118)
T ss_dssp EEEE--TTEEEEEEESTTTTTCSSCCHHHHHHHHHTT
T ss_pred EEEE--CCEEEEEEeChhhhCCCCCCHHHHHHHHHHc
Confidence 9997 59999999986421 122 45566666553
No 161
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.29 E-value=2.4e-06 Score=73.25 Aligned_cols=94 Identities=13% Similarity=0.151 Sum_probs=69.6
Q ss_pred cCCeEEEEEe-CCCCcchhhhhhccCCCHHHHHHHh-cceEEEEeecCChH-----------------------HHHHHH
Q 020843 179 QDKWLLVNLQ-STKEFSSHMLNRDTWANEAVSQTIS-TNFIFWQVYDDTSE-----------------------GKKVCT 233 (320)
Q Consensus 179 ~~K~LLV~l~-~~~~f~c~~lnRdvw~n~~V~~~l~-~nFV~~q~d~~s~e-----------------------g~~~~~ 233 (320)
.+|+++|+|+ .+||..|...-..+ ..+.+-++ .++.++.++.++++ ...+++
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l---~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 106 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDV---QKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISR 106 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHH---HHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHH
T ss_pred CCCCEEEEEECCCCCcchHHHHHHH---HHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHH
Confidence 5799999999 99999998764322 12222233 36888888877632 235677
Q ss_pred HcCCC------CCcEEEEEecCCCceEEEEecCC----ChHHHHHHHHHHHhc
Q 020843 234 YYKLD------SIPVVLVVDPITGQKMRSWCGMV----QPESLLEDLVPFMDG 276 (320)
Q Consensus 234 ~Y~v~------~~P~i~Iidp~tG~~v~~~~G~~----~~~~fl~~L~~fld~ 276 (320)
.|++. .+|+++|||+ .|+.+..+.|.. +++++++.|......
T Consensus 107 ~~~v~~~~~g~~~P~~~lid~-~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~~ 158 (187)
T 1we0_A 107 QFDVLNEETGLADRGTFIIDP-DGVIQAIEINADGIGRDASTLINKVKAAQYV 158 (187)
T ss_dssp HTTCEETTTTEECEEEEEECT-TSBEEEEEEECTTSCCCTTHHHHHHHHHHHH
T ss_pred HhCCCcCCCCceeeEEEEECC-CCeEEEEEecCCCCCCCHHHHHHHHHHHhhh
Confidence 88887 8999999997 599998888864 688899888887753
No 162
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.29 E-value=5e-06 Score=69.08 Aligned_cols=94 Identities=14% Similarity=0.155 Sum_probs=64.9
Q ss_pred cCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh-cceEEEEeecCC---------hHHHHH-HHHc------------
Q 020843 179 QDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS-TNFIFWQVYDDT---------SEGKKV-CTYY------------ 235 (320)
Q Consensus 179 ~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~-~nFV~~q~d~~s---------~eg~~~-~~~Y------------ 235 (320)
++||+||+|+.+||..|...-..+ ..+.+-++ .++.++.++.+. .+..++ .+.|
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l---~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 106 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQL---QEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKV 106 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHH---HHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSEEBCCCCC
T ss_pred CCCEEEEEEeeccCCchHHHHHHH---HHHHHHhhcCCeEEEEEECCccCCCCCCCHHHHHHHHHHhcCCCCceEEEEee
Confidence 589999999999999997654322 12222222 357777776542 223444 2322
Q ss_pred -----------------C-----CCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 236 -----------------K-----LDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 236 -----------------~-----v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
+ +..+|+++|||+ .|+.+.++.|..+++++.+.|.+.+.+
T Consensus 107 ~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~i~~ll~~ 168 (169)
T 2v1m_A 107 NGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDR-QGQPVKRYSPTTAPYDIEGDIMELLEK 168 (169)
T ss_dssp SSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECT-TSCEEEEECTTSCGGGGHHHHHHHHHC
T ss_pred cCccccHHHHHHHhhcCCccCCcccccceEEEECC-CCCEEEEcCCCCCHHHHHHHHHHHhcc
Confidence 2 334589999997 699999999998999999988888764
No 163
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=98.25 E-value=4.1e-06 Score=80.11 Aligned_cols=99 Identities=14% Similarity=0.160 Sum_probs=77.0
Q ss_pred ccccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhc------cCCCHHHHHHHhc-ceEEEEeecCChHHHHHHHHcCC
Q 020843 165 FNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRD------TWANEAVSQTIST-NFIFWQVYDDTSEGKKVCTYYKL 237 (320)
Q Consensus 165 ~~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRd------vw~n~~V~~~l~~-nFV~~q~d~~s~eg~~~~~~Y~v 237 (320)
...+|++++ ++++++||+|+++||..| .+++. +| +.+.+.++. ++.|.++|.+.. ..+++.|+|
T Consensus 19 t~~~f~~~i----~~~~~vlV~FyApWC~~~-~~~~~l~~~~p~~--e~~a~~~~~~~v~~~~Vd~~~~--~~l~~~~~V 89 (367)
T 3us3_A 19 NAKNYKNVF----KKYEVLALLYHEPPEDDK-ASQRQFEMEELIL--ELAAQVLEDKGVGFGLVDSEKD--AAVAKKLGL 89 (367)
T ss_dssp CTTTHHHHH----HHCSEEEEEEECCCCSSH-HHHHHHHHHHHHH--HHHHHHHTTTTEEEEEEETTTT--HHHHHHHTC
T ss_pred CHHHHHHHH----hhCCeEEEEEECCCchhH-HHhhhhccccHHH--HHHHHHhhcCCceEEEEeCccc--HHHHHHcCC
Confidence 456888877 348999999999999887 55442 22 445556654 589999998754 468999999
Q ss_pred CCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHh
Q 020843 238 DSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 238 ~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld 275 (320)
.+||++.++. .|+.+ .+.|..+++.+++.|.+.+.
T Consensus 90 ~~~PTl~~f~--~G~~~-~y~G~~~~~~i~~~i~~~~~ 124 (367)
T 3us3_A 90 TEEDSIYVFK--EDEVI-EYDGEFSADTLVEFLLDVLE 124 (367)
T ss_dssp CSTTEEEEEE--TTEEE-ECCSCCSHHHHHHHHHHHHS
T ss_pred CcCceEEEEE--CCcEE-EeCCCCCHHHHHHHHHHhcC
Confidence 9999999998 47664 77899999999888887764
No 164
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.24 E-value=2e-06 Score=71.25 Aligned_cols=86 Identities=10% Similarity=-0.024 Sum_probs=62.6
Q ss_pred cCC-eEEEEEe-CCCCcchhhhhhccCCCHHHHHHHh----cceEEEEeecCChH---------------------HHHH
Q 020843 179 QDK-WLLVNLQ-STKEFSSHMLNRDTWANEAVSQTIS----TNFIFWQVYDDTSE---------------------GKKV 231 (320)
Q Consensus 179 ~~K-~LLV~l~-~~~~f~c~~lnRdvw~n~~V~~~l~----~nFV~~q~d~~s~e---------------------g~~~ 231 (320)
.+| |++|+|+ ++||..|...- +.+.++.+ .++.++.++.++++ ...+
T Consensus 34 ~gk~~vvl~F~~a~~C~~C~~~~------~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 107 (160)
T 1xvw_A 34 RGAKNVLLVFFPLAFTGICQGEL------DQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAV 107 (160)
T ss_dssp TTTCEEEEEECSCTTSSHHHHHH------HHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHH
T ss_pred cCCCCEEEEEECCCCCCchHHHH------HHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHH
Confidence 466 9999998 99999998764 44444443 35778888777533 4567
Q ss_pred HHHcCCC----CCc--EEEEEecCCCceEEEEecCCCh----HHHHHHHH
Q 020843 232 CTYYKLD----SIP--VVLVVDPITGQKMRSWCGMVQP----ESLLEDLV 271 (320)
Q Consensus 232 ~~~Y~v~----~~P--~i~Iidp~tG~~v~~~~G~~~~----~~fl~~L~ 271 (320)
.+.|++. .+| +++|||+ .|+.+..+.|..+. ++++..|.
T Consensus 108 ~~~~~v~~~~~~~p~~~~~lid~-~G~i~~~~~g~~~~~~~~~~l~~~l~ 156 (160)
T 1xvw_A 108 SQAYGVFNEQAGIANRGTFVVDR-SGIIRFAEMKQPGEVRDQRLWTDALA 156 (160)
T ss_dssp HHHTTCEETTTTEECSEEEEECT-TSBEEEEEECCTTCCCCHHHHHHHHH
T ss_pred HHHcCCccccCCCeeeeEEEECC-CCeEEEEEecCCCCCCCHHHHHHHHH
Confidence 7889887 889 9999997 69999888887543 44444443
No 165
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=98.23 E-value=7.1e-06 Score=72.30 Aligned_cols=86 Identities=6% Similarity=0.041 Sum_probs=67.5
Q ss_pred hcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc--ceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCCceEE
Q 020843 178 VQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST--NFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMR 255 (320)
Q Consensus 178 ~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~--nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~ 255 (320)
..+++++|+|+++||..|+.+. +.+.++.++ ++.+..+|.+.. ..+++.|++.++|+++| +|+ +.
T Consensus 134 ~~~~~~~v~F~a~wC~~C~~~~------~~~~~~~~~~~~v~~~~vd~~~~--~~l~~~~~v~~~Pt~~~----~G~-~~ 200 (229)
T 2ywm_A 134 VDIPIEIWVFVTTSCGYCPSAA------VMAWDFALANDYITSKVIDASEN--QDLAEQFQVVGVPKIVI----NKG-VA 200 (229)
T ss_dssp CCSCEEEEEEECTTCTTHHHHH------HHHHHHHHHCTTEEEEEEEGGGC--HHHHHHTTCCSSSEEEE----GGG-TE
T ss_pred cCCCeEEEEEECCCCcchHHHH------HHHHHHHHHCCCeEEEEEECCCC--HHHHHHcCCcccCEEEE----CCE-EE
Confidence 3456669999999999999996 444444433 688888887653 45888999999999998 477 66
Q ss_pred EEecCCChHHHHHHHHHHHhc
Q 020843 256 SWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 256 ~~~G~~~~~~fl~~L~~fld~ 276 (320)
++.|..+.+++.+.|.+.+..
T Consensus 201 ~~~G~~~~~~l~~~l~~~~~~ 221 (229)
T 2ywm_A 201 EFVGAQPENAFLGYIMAVYEK 221 (229)
T ss_dssp EEESCCCHHHHHHHHHHHHHH
T ss_pred EeeCCCCHHHHHHHHHHHhhh
Confidence 688999999999999888764
No 166
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.20 E-value=4e-06 Score=72.17 Aligned_cols=95 Identities=13% Similarity=0.139 Sum_probs=64.8
Q ss_pred hcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh-cceEEEEeecC---------ChHHHHHHH-H------------
Q 020843 178 VQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS-TNFIFWQVYDD---------TSEGKKVCT-Y------------ 234 (320)
Q Consensus 178 ~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~-~nFV~~q~d~~---------s~eg~~~~~-~------------ 234 (320)
-++|++||+|+.+||.+|...-..+ ..+.+-++ .++.++.++++ ..+-.++++ .
T Consensus 44 ~~Gk~vlv~F~atwC~~C~~~~p~l---~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d 120 (187)
T 3dwv_A 44 HKGSPLLIYNVASKCGYTKGGYETA---TTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKIN 120 (187)
T ss_dssp GTTSCEEEEEECCBCSCCTTHHHHH---HHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBC
T ss_pred hCCCEEEEEEecCCCCCcHHHHHHH---HHHHHHhhhCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceeeccc
Confidence 3689999999999999998864322 12222222 35777777654 122333333 2
Q ss_pred --------------------cCCCCCc---EEEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 235 --------------------YKLDSIP---VVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 235 --------------------Y~v~~~P---~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
|.+..+| +++|||+ .|+.+..+.|..+++++.+.|.+.|..
T Consensus 121 ~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~-~G~i~~~~~g~~~~~~l~~~i~~lL~~ 184 (187)
T 3dwv_A 121 VNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDR-DGVPVERFSPGASVKDIEEKLIPLLGS 184 (187)
T ss_dssp CSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECT-TSCEEEEECTTCCHHHHHHHHHHHC--
T ss_pred cCCcchhHHHHHHHhhcCCccCCCccccceeEEEECC-CCCEEEEECCCCCHHHHHHHHHHHHhc
Confidence 1234567 9999997 699999999999999999999888764
No 167
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.19 E-value=4.4e-06 Score=72.32 Aligned_cols=94 Identities=10% Similarity=0.063 Sum_probs=68.6
Q ss_pred cCCeEEEEEe-CCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChH--------------------------HHHH
Q 020843 179 QDKWLLVNLQ-STKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSE--------------------------GKKV 231 (320)
Q Consensus 179 ~~K~LLV~l~-~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~e--------------------------g~~~ 231 (320)
.+|+++|+|+ ++||..|...-..+= +...++-..++.++.++.++++ ...+
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~--~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 109 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFD--KRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSI 109 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHH--HTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHH--HHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHH
Confidence 6899999999 999999987643321 1112222346888888877533 2357
Q ss_pred HHHcCCC-----CCcEEEEEecCCCceEEEEecCC----ChHHHHHHHHHHHh
Q 020843 232 CTYYKLD-----SIPVVLVVDPITGQKMRSWCGMV----QPESLLEDLVPFMD 275 (320)
Q Consensus 232 ~~~Y~v~-----~~P~i~Iidp~tG~~v~~~~G~~----~~~~fl~~L~~fld 275 (320)
++.|++. .+|+++|||+ .|+.+..+.|.. +++++++.|.....
T Consensus 110 ~~~~~v~~~~g~~~P~~~lid~-~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 161 (198)
T 1zof_A 110 SRDYDVLFEEAIALRGAFLIDK-NMKVRHAVINDLPLGRNADEMLRMVDALLH 161 (198)
T ss_dssp HHHTTCEETTTEECEEEEEEET-TTEEEEEEEESSSCCCHHHHHHHHHHHHHH
T ss_pred HHHhCCcccCCcccceEEEECC-CCEEEEEEecCCCCCCCHHHHHHHHHHHHH
Confidence 7788888 8999999997 699988888865 57788888777653
No 168
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=98.19 E-value=4.7e-06 Score=71.57 Aligned_cols=85 Identities=13% Similarity=0.100 Sum_probs=61.3
Q ss_pred hcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc--ceEEEEeecCChHHHHHHHHcC---CCCCcEEEEEecCCCc
Q 020843 178 VQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST--NFIFWQVYDDTSEGKKVCTYYK---LDSIPVVLVVDPITGQ 252 (320)
Q Consensus 178 ~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~--nFV~~q~d~~s~eg~~~~~~Y~---v~~~P~i~Iidp~tG~ 252 (320)
..+|+++|+|+++||++|..+. |.+.++..+ ++.+..++++ +...++..|. +.++|+++|++. .|+
T Consensus 52 ~~~k~vvv~F~A~WC~pC~~~~------P~l~~l~~~~~~v~~~~v~~d--~~~~~~~~~~~~~v~~iPt~i~~~~-~G~ 122 (167)
T 1z6n_A 52 IERRYRLLVAGEMWCPDCQINL------AALDFAQRLQPNIELAIISKG--RAEDDLRQRLALERIAIPLVLVLDE-EFN 122 (167)
T ss_dssp CCSCEEEEEECCTTCHHHHHHH------HHHHHHHHHCTTEEEEEECHH--HHHHHTTTTTTCSSCCSSEEEEECT-TCC
T ss_pred hCCCEEEEEEECCCChhHHHHH------HHHHHHHHHCCCcEEEEEECC--CCHHHHHHHHHcCCCCcCeEEEECC-CCC
Confidence 4689999999999999999884 555555443 5777777765 4456777787 899999999996 578
Q ss_pred eEEEEecCCChHHHHHHHHHH
Q 020843 253 KMRSWCGMVQPESLLEDLVPF 273 (320)
Q Consensus 253 ~v~~~~G~~~~~~fl~~L~~f 273 (320)
.+.++.| .|....+.+.++
T Consensus 123 ~~~~~g~--~p~~~~~~i~~~ 141 (167)
T 1z6n_A 123 LLGRFVE--RPQAVLDGGPQA 141 (167)
T ss_dssp EEEEEES--SCHHHHHHCHHH
T ss_pred EEEEEcC--CCHHHHHhHHHH
Confidence 8877743 334444444443
No 169
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.19 E-value=4.5e-06 Score=69.60 Aligned_cols=88 Identities=17% Similarity=0.182 Sum_probs=64.2
Q ss_pred hcCCeEEEEEeCCCCcc-hhhhhhccCCCHHHHHHHhc-------ceEEEEeecCC----hH-H----------------
Q 020843 178 VQDKWLLVNLQSTKEFS-SHMLNRDTWANEAVSQTIST-------NFIFWQVYDDT----SE-G---------------- 228 (320)
Q Consensus 178 ~~~K~LLV~l~~~~~f~-c~~lnRdvw~n~~V~~~l~~-------nFV~~q~d~~s----~e-g---------------- 228 (320)
-.+||+||+|+.+||.+ |...- +.+.++.++ ++.++.++++. ++ .
T Consensus 33 ~~gk~vll~f~~~~C~~~C~~~~------~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d 106 (172)
T 2k6v_A 33 FQDKVVLLFFGFTRCPDVCPTTL------LALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSG 106 (172)
T ss_dssp STTSEEEEEEECTTCSSHHHHHH------HHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECC
T ss_pred hCCCEEEEEEECCCCcchhHHHH------HHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeC
Confidence 36899999999999998 98764 444444432 57777777652 22 1
Q ss_pred -----HHHHHHcCC---------------CCCcEEEEEecCCCceEEEEecCC--ChHHHHHHHHHH
Q 020843 229 -----KKVCTYYKL---------------DSIPVVLVVDPITGQKMRSWCGMV--QPESLLEDLVPF 273 (320)
Q Consensus 229 -----~~~~~~Y~v---------------~~~P~i~Iidp~tG~~v~~~~G~~--~~~~fl~~L~~f 273 (320)
.++++.|++ ..+|+++||| .|+.+..+.|.. +++++++.|...
T Consensus 107 ~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid--~G~i~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 107 SPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK--EGRLVLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp CHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE--TTEEEEEECHHHHTCHHHHHHHHHHC
T ss_pred CHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE--CCEEEEEECCCCCCCHHHHHHHHHHh
Confidence 345555543 4689999999 599998888877 889888888754
No 170
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.15 E-value=1.3e-05 Score=70.13 Aligned_cols=92 Identities=17% Similarity=0.269 Sum_probs=70.3
Q ss_pred hcCCeEEEEEeCC-CCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCCceE-E
Q 020843 178 VQDKWLLVNLQST-KEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKM-R 255 (320)
Q Consensus 178 ~~~K~LLV~l~~~-~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v-~ 255 (320)
.+++.++|+|+++ ||..|+.+...+ +.+.+. ..++.|..+|.+.++...+++.|++.++|++.|+. .|+.. .
T Consensus 20 ~~~~v~lv~f~~~~~C~~C~~~~~~~---~~la~~-~~~v~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~~--~g~~~~~ 93 (226)
T 1a8l_A 20 MVNPVKLIVFVRKDHCQYCDQLKQLV---QELSEL-TDKLSYEIVDFDTPEGKELAKRYRIDRAPATTITQ--DGKDFGV 93 (226)
T ss_dssp CCSCEEEEEEECSSSCTTHHHHHHHH---HHHHTT-CTTEEEEEEETTSHHHHHHHHHTTCCSSSEEEEEE--TTBCCSE
T ss_pred cCCCeEEEEEecCCCCchhHHHHHHH---HHHHhh-CCceEEEEEeCCCcccHHHHHHcCCCcCceEEEEc--CCceeeE
Confidence 4567788999999 999999985432 223322 35788999999987788999999999999999995 36654 6
Q ss_pred EEecCCChHHHHHHHHHHHh
Q 020843 256 SWCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 256 ~~~G~~~~~~fl~~L~~fld 275 (320)
++.|..+.+++.+.+...++
T Consensus 94 ~~~G~~~~~~l~~~l~~~l~ 113 (226)
T 1a8l_A 94 RYFGLPAGHEFAAFLEDIVD 113 (226)
T ss_dssp EEESCCCTTHHHHHHHHHHH
T ss_pred EEeccCcHHHHHHHHHHHHh
Confidence 77888777777776666654
No 171
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=97.40 E-value=3.4e-07 Score=75.94 Aligned_cols=99 Identities=9% Similarity=0.020 Sum_probs=61.9
Q ss_pred HHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHH-hcceEEEEeecCCh--HHHHHHH---------------
Q 020843 172 AKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTI-STNFIFWQVYDDTS--EGKKVCT--------------- 233 (320)
Q Consensus 172 A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l-~~nFV~~q~d~~s~--eg~~~~~--------------- 233 (320)
....+.-++|++||+|+++||..|..+-..+- .....++- ..++.++.++.++. ...++.+
T Consensus 25 ~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~-~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~ 103 (159)
T 2ls5_A 25 QVTLSSLRGKVVMLQFTASWCGVCRKEMPFIE-KDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGAD 103 (159)
Confidence 34444457899999999999999988654432 11112222 35677777776543 2333443
Q ss_pred ---HcC--CCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHH
Q 020843 234 ---YYK--LDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPF 273 (320)
Q Consensus 234 ---~Y~--v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~f 273 (320)
.|+ +.++|+++|||+ .|+.+.++.| .+++++.+.|...
T Consensus 104 ~~~~~~~~~~~~P~~~lid~-~G~i~~~~~g-~~~~~l~~~l~~l 146 (159)
T 2ls5_A 104 IFAKYALRDAGITRNVLIDR-EGKIVKLTRL-YNEEEFASLVQQI 146 (159)
Confidence 333 356999999997 5988887777 3455544444433
No 172
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.11 E-value=7.3e-06 Score=69.93 Aligned_cols=90 Identities=11% Similarity=0.084 Sum_probs=60.4
Q ss_pred cCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh-cceEEEEeecC--------C-hHHHHHHHHcC------------
Q 020843 179 QDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS-TNFIFWQVYDD--------T-SEGKKVCTYYK------------ 236 (320)
Q Consensus 179 ~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~-~nFV~~q~d~~--------s-~eg~~~~~~Y~------------ 236 (320)
++||+||+|+.+||..|...-..+ ..+.+-++ .++.++.++.+ + .+..++++.|+
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l---~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~p~~~~~d~~ 122 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQL---VDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVN 122 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHH---HHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHTTTCCSEEBCCCCCS
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHH---HHHHHHHhcCCeEEEEEECCCCCCCCCCCHHHHHHHHHHcCCCceEEeeeccC
Confidence 589999999999999997764322 12222222 35777777654 2 22344444332
Q ss_pred ------------------------CCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHH
Q 020843 237 ------------------------LDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVP 272 (320)
Q Consensus 237 ------------------------v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~ 272 (320)
+..+|+++|||+ .|+.+.++.|..+++++.+.|.+
T Consensus 123 ~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~i~~ 181 (183)
T 2obi_A 123 GDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDK-NGCVVKRYGPMEEPLVIEKDLPH 181 (183)
T ss_dssp STTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECT-TSCEEEEECTTSCTHHHHTTSGG
T ss_pred CcchhHHHHHhhccCCCCCcccccccccceEEEECC-CCCEEEEeCCCCCHHHHHHHHHH
Confidence 222599999997 69999999998888887665543
No 173
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.10 E-value=2.2e-05 Score=68.29 Aligned_cols=97 Identities=14% Similarity=0.131 Sum_probs=66.7
Q ss_pred hcCCeEEEEEeCCCCcc-hhhhhhccCCCHHHHHHHh----cceEEEEeecC----Ch----------------------
Q 020843 178 VQDKWLLVNLQSTKEFS-SHMLNRDTWANEAVSQTIS----TNFIFWQVYDD----TS---------------------- 226 (320)
Q Consensus 178 ~~~K~LLV~l~~~~~f~-c~~lnRdvw~n~~V~~~l~----~nFV~~q~d~~----s~---------------------- 226 (320)
-.+||+||+|..+||.+ |...-..+ ..+.+.+. .++.++.++++ ++
T Consensus 39 ~~Gk~vlv~F~at~C~~vC~~~~~~l---~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d 115 (200)
T 2b7k_A 39 LLGKFSIIYFGFSNCPDICPDELDKL---GLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFD 115 (200)
T ss_dssp GTTSCEEEEEECTTCCSHHHHHHHHH---HHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHH
T ss_pred cCCCEEEEEEECCCCcchhHHHHHHH---HHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHH
Confidence 35899999999999998 98753221 12222232 25666666554 22
Q ss_pred HHHHHHHHcCCC-CC---------------cEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhcCC
Q 020843 227 EGKKVCTYYKLD-SI---------------PVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDGGP 278 (320)
Q Consensus 227 eg~~~~~~Y~v~-~~---------------P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~~~ 278 (320)
+...+++.|++. .. |+++|||+ .|+.+..+.|..+++++.+.|...++...
T Consensus 116 ~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~-~G~i~~~~~g~~~~~~~~~~i~~~l~~l~ 182 (200)
T 2b7k_A 116 EVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDP-EGQFVDALGRNYDEKTGVDKIVEHVKSYV 182 (200)
T ss_dssp HHHHHHHHTTC--------------CTTTCCCEEEECT-TSCEEEEECTTCCTTHHHHHHHHHHHHCC
T ss_pred HHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECC-CCcEEEEeCCCCCHHHHHHHHHHHHHHhh
Confidence 234577778775 33 38899998 59999888888899999999999987643
No 174
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.10 E-value=2e-05 Score=67.14 Aligned_cols=94 Identities=15% Similarity=0.171 Sum_probs=67.3
Q ss_pred cCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh-cceEEEEeecC--------C-hHHHHHHHH-cCCC---------
Q 020843 179 QDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS-TNFIFWQVYDD--------T-SEGKKVCTY-YKLD--------- 238 (320)
Q Consensus 179 ~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~-~nFV~~q~d~~--------s-~eg~~~~~~-Y~v~--------- 238 (320)
++|++||+|..+||+.|...-..+ ..+.+-++ .++.++.+..+ + .+-.++++. |++.
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l---~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~d~ 113 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGL---KELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKI 113 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHH---HHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCC
T ss_pred CCCEEEEEEEecCCCCcHHHHHHH---HHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHHHHhcCCCCceeeeeec
Confidence 689999999999999998864322 22333333 35888888753 3 335667776 5431
Q ss_pred -----------------CCcE----EEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 239 -----------------SIPV----VLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 239 -----------------~~P~----i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
.+|+ .+|||+ .|+.+.++.|..+++++.+.|.+.|+.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~p~~~~~~~lid~-~G~i~~~~~g~~~~~~l~~~i~~lL~~ 171 (180)
T 3kij_A 114 LGSEGEPAFRFLVDSSKKEPRWNFWKYLVNP-EGQVVKFWRPEEPIEVIRPDIAALVRQ 171 (180)
T ss_dssp SSTTCCHHHHHHHHHHTCCCSSTTCEEEECT-TSCEEEEECTTCCGGGTHHHHHHHHHH
T ss_pred cCccccHHHHHHHhcCCCCccccceEEEECC-CCCEEEEECCCCCHHHHHHHHHHHHHH
Confidence 2677 899997 699999999999988887777777654
No 175
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.09 E-value=1.1e-05 Score=71.26 Aligned_cols=97 Identities=12% Similarity=0.098 Sum_probs=68.7
Q ss_pred cCCe-EEEEEeCCCCcchhhhhhccCCCHHHHHHHh-cceEEEEeecCC--------h-------------------HHH
Q 020843 179 QDKW-LLVNLQSTKEFSSHMLNRDTWANEAVSQTIS-TNFIFWQVYDDT--------S-------------------EGK 229 (320)
Q Consensus 179 ~~K~-LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~-~nFV~~q~d~~s--------~-------------------eg~ 229 (320)
.+|+ +||+|+++||+.|...-..+ ..+.+-++ .++.++.++.+. + ...
T Consensus 57 ~gk~~vll~F~a~~C~~C~~~~~~l---~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~ 133 (218)
T 3u5r_E 57 KDSPALLVAFISNRCPFVVLIREAL---AKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQ 133 (218)
T ss_dssp TTCSEEEEEECCSSCHHHHTTHHHH---HHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTC
T ss_pred CCCCeEEEEEECCCCccHHHHHHHH---HHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCcc
Confidence 5786 99999999999998775332 22222233 348888888742 1 124
Q ss_pred HHHHHcCCCCCcEEEEEecCCCceEEEEe---------cCCChHHHHHHHHHHHhcCCC
Q 020843 230 KVCTYYKLDSIPVVLVVDPITGQKMRSWC---------GMVQPESLLEDLVPFMDGGPR 279 (320)
Q Consensus 230 ~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~---------G~~~~~~fl~~L~~fld~~~~ 279 (320)
.+++.|++..+|+++|||+ .|+.+.+.. |..+.+++.+.|...+...+.
T Consensus 134 ~~~~~~~v~~~P~~~liD~-~G~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~~~~ 191 (218)
T 3u5r_E 134 SVAKAYGAACTPDFFLYDR-ERRLVYHGQFDDARPGNGKDVTGADLRAAVDAVLKGKDV 191 (218)
T ss_dssp HHHHHHTCCEESEEEEECT-TCBEEEEECSSSCCTTSCCCCCCHHHHHHHHHHHTTCCC
T ss_pred HHHHHcCCCCCCeEEEECC-CCcEEEeccccccccccccccCHHHHHHHHHHHHcCCCC
Confidence 6777899999999999997 588875421 234578899999998876554
No 176
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.09 E-value=1e-05 Score=69.70 Aligned_cols=94 Identities=12% Similarity=0.132 Sum_probs=67.8
Q ss_pred cCCeEEEEEe-CCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChH--------------------------HHHH
Q 020843 179 QDKWLLVNLQ-STKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSE--------------------------GKKV 231 (320)
Q Consensus 179 ~~K~LLV~l~-~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~e--------------------------g~~~ 231 (320)
.+||++|+|+ .+||+.|...-..+ .+...++-..++.++.++.++++ ...+
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l--~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~ 107 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIAL--DKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSI 107 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHH--HHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHH--HHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHH
Confidence 6899999999 99999998764322 11122222356888888877643 2357
Q ss_pred HHHcCCC-----CCcEEEEEecCCCceEEEEecCC----ChHHHHHHHHHHHh
Q 020843 232 CTYYKLD-----SIPVVLVVDPITGQKMRSWCGMV----QPESLLEDLVPFMD 275 (320)
Q Consensus 232 ~~~Y~v~-----~~P~i~Iidp~tG~~v~~~~G~~----~~~~fl~~L~~fld 275 (320)
++.|++. .+|+++|||+ .|+.+..+.|.. +.+++++.|.....
T Consensus 108 ~~~~gv~~~~g~~~P~~~liD~-~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 159 (192)
T 2h01_A 108 ARSYDVLFNESVALRAFVLIDK-QGVVQHLLVNNLALGRSVDEILRLIDALQH 159 (192)
T ss_dssp HHHTTCEETTTEECCEEEEECT-TSBEEEEEEGGGSSGGGHHHHHHHHHHHHH
T ss_pred HHHhCCcCcCCceeeEEEEEcC-CCEEEEEEeCCCCCCCCHHHHHHHHHHHhh
Confidence 7788888 8999999998 599888877743 47788887777653
No 177
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.08 E-value=1e-05 Score=70.41 Aligned_cols=94 Identities=13% Similarity=0.110 Sum_probs=67.8
Q ss_pred cCCeEEEEEe-CCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChH--------------------------HHHH
Q 020843 179 QDKWLLVNLQ-STKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSE--------------------------GKKV 231 (320)
Q Consensus 179 ~~K~LLV~l~-~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~e--------------------------g~~~ 231 (320)
.+||++|+|+ .+||+.|...-..+ .+...++-..++.++.++.++.+ ...+
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l--~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~ 112 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQF--SDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCI 112 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHH--HHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHH
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHH--HHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHH
Confidence 5799999999 99999998765332 11122222346888888877643 2356
Q ss_pred HHHcCCC------CCcEEEEEecCCCceEEEEecCC----ChHHHHHHHHHHHh
Q 020843 232 CTYYKLD------SIPVVLVVDPITGQKMRSWCGMV----QPESLLEDLVPFMD 275 (320)
Q Consensus 232 ~~~Y~v~------~~P~i~Iidp~tG~~v~~~~G~~----~~~~fl~~L~~fld 275 (320)
++.|++. .+|+++|||+ .|+.+..+.|.. +.+++++.|.....
T Consensus 113 ~~~ygv~~~~~g~~~P~~~lid~-~G~i~~~~~g~~~~~~~~~ell~~l~~l~~ 165 (202)
T 1uul_A 113 MKSYGVLKEEDGVAYRGLFIIDP-KQNLRQITVNDLPVGRDVDEALRLVKAFQF 165 (202)
T ss_dssp HHHHTCEETTTTEECEEEEEECT-TSBEEEEEEECTTBCCCHHHHHHHHHHHHH
T ss_pred HHHcCCccCCCCceeeEEEEECC-CCEEEEEEeCCCCCCCCHHHHHHHHHHhhh
Confidence 6778887 8999999998 599888877753 46888888887763
No 178
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=98.07 E-value=3.1e-05 Score=67.50 Aligned_cols=105 Identities=13% Similarity=0.189 Sum_probs=72.8
Q ss_pred cccccHHHHHHHHHhcCCeEEEEEeC-------CCCcchhhhhhccCCCHHHHHHHh-----cceEEEEeecCChHHHHH
Q 020843 164 MFNGSFEKAKDAASVQDKWLLVNLQS-------TKEFSSHMLNRDTWANEAVSQTIS-----TNFIFWQVYDDTSEGKKV 231 (320)
Q Consensus 164 ~~~gsf~~A~~~Ak~~~K~LLV~l~~-------~~~f~c~~lnRdvw~n~~V~~~l~-----~nFV~~q~d~~s~eg~~~ 231 (320)
+-..+|++.+. ...+.+++|+|++ .||.+|+.|...+ +.|.+-.. .+.+|..+|++. +..+
T Consensus 23 lt~~nF~~~v~--~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~---e~lA~~~~~~~~~~~v~f~kvD~d~--~~~l 95 (178)
T 3ga4_A 23 VTADNYPLLSR--GVPGYFNILYITMRGTNSNGMSCQLCHDFEKTY---HAVADVIRSQAPQSLNLFFTVDVNE--VPQL 95 (178)
T ss_dssp CCTTTHHHHTT--CCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHH---HHHHHHHHHHCTTCCEEEEEEETTT--CHHH
T ss_pred CCHHHHHHHHc--ccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHH---HHHHHHhhhccCCCCEEEEEEECcc--CHHH
Confidence 34668987543 3467899999999 4999999995321 33333333 568899999885 5679
Q ss_pred HHHcCCCCCcEEEEEecCCCce----------EEEE---ec-CCChHHHHHHHHHHHh
Q 020843 232 CTYYKLDSIPVVLVVDPITGQK----------MRSW---CG-MVQPESLLEDLVPFMD 275 (320)
Q Consensus 232 ~~~Y~v~~~P~i~Iidp~tG~~----------v~~~---~G-~~~~~~fl~~L~~fld 275 (320)
++.|+|.++|+|+++-+-.+.. -.++ .| ..+++.|.+-|.+-+.
T Consensus 96 a~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~ 153 (178)
T 3ga4_A 96 VKDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILN 153 (178)
T ss_dssp HHHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHT
T ss_pred HHHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcC
Confidence 9999999999999999743222 0122 24 5677777666655444
No 179
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.07 E-value=1.4e-05 Score=69.14 Aligned_cols=93 Identities=10% Similarity=0.060 Sum_probs=67.8
Q ss_pred cCCeEEEEEe-CCCCcchhhhhhccCCCHHHHHHH-hcceEEEEeecCChH--------------------------HHH
Q 020843 179 QDKWLLVNLQ-STKEFSSHMLNRDTWANEAVSQTI-STNFIFWQVYDDTSE--------------------------GKK 230 (320)
Q Consensus 179 ~~K~LLV~l~-~~~~f~c~~lnRdvw~n~~V~~~l-~~nFV~~q~d~~s~e--------------------------g~~ 230 (320)
.+||++|+|+ .+||+.|...-..+ ..+.+-+ ..++.++.++.++.+ ...
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l---~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~ 109 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAF---SNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRR 109 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHH---HHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHH---HHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHH
Confidence 5799999999 99999998865432 1222223 346888888887643 235
Q ss_pred HHHHcCCC------CCcEEEEEecCCCceEEEEecCC----ChHHHHHHHHHHHh
Q 020843 231 VCTYYKLD------SIPVVLVVDPITGQKMRSWCGMV----QPESLLEDLVPFMD 275 (320)
Q Consensus 231 ~~~~Y~v~------~~P~i~Iidp~tG~~v~~~~G~~----~~~~fl~~L~~fld 275 (320)
+++.|++. .+|+++|||+ .|+.+..+.|.. +.++++..|.....
T Consensus 110 ~~~~~gv~~~~~~~~~P~~~lid~-~G~i~~~~~g~~~~~~~~~e~l~~l~~l~~ 163 (197)
T 1qmv_A 110 LSEDYGVLKTDEGIAYRGLFIIDG-KGVLRQITVNDLPVGRSVDEALRLVQAFQY 163 (197)
T ss_dssp HHHHTTCEETTTTEECEEEEEECT-TSBEEEEEEECTTBCCCHHHHHHHHHHHHH
T ss_pred HHHHcCCccCCCCceeeEEEEECC-CCcEEEEEeCCCCCCCCHHHHHHHHHhcch
Confidence 77788886 7999999997 599888887754 46888887776643
No 180
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.07 E-value=3e-06 Score=88.27 Aligned_cols=98 Identities=17% Similarity=0.220 Sum_probs=70.3
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEE
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLV 245 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~I 245 (320)
..+|++++ +.++.+||+|+++||..|+.|...+ +.+.+.+...+.+..+|.+.. ..+++.|++.++|++.+
T Consensus 123 ~~~f~~~i----~~~~~~lv~Fya~wC~~C~~~~p~~---~~~a~~~~~~v~~~~vd~~~~--~~l~~~~~v~~~Pt~~~ 193 (780)
T 3apo_A 123 RREFDAAV----NSGELWFVNFYSPGSSHSHDLAPTW---REFAKEVDGLLRIGAVNCGDD--RMLCRMKGVNSYPSLFI 193 (780)
T ss_dssp HHHHHHHH----TSSSCEEEEEECSSCHHHHHHHHHH---HHHHHHTTTTSEEEEEETTTC--SSCC--------CEEEE
T ss_pred hHhHHhhh----cCCCcEEEEEeCCCCcchhHhhHHH---HHHHHHhcCceEEEEEeCCCc--HHHHHHcCCceeeeEEE
Confidence 34676666 7799999999999999999997644 556666666788999998764 35888999999999998
Q ss_pred EecCCCceEEEEecCCChHHHHHHHHHHH
Q 020843 246 VDPITGQKMRSWCGMVQPESLLEDLVPFM 274 (320)
Q Consensus 246 idp~tG~~v~~~~G~~~~~~fl~~L~~fl 274 (320)
+. .|+.+.++.|..+.+.+.+.|.+.+
T Consensus 194 ~~--~g~~~~~~~G~~~~~~l~~~l~~~~ 220 (780)
T 3apo_A 194 FR--SGMAAVKYNGDRSKESLVAFAMQHV 220 (780)
T ss_dssp EC--TTSCCEECCSCSCHHHHHHHHHTTS
T ss_pred Ee--CCcEeeEecCCCCHHHHHHHHHHhc
Confidence 84 5887888889888888777665544
No 181
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.06 E-value=1.7e-05 Score=70.11 Aligned_cols=93 Identities=13% Similarity=0.121 Sum_probs=67.9
Q ss_pred cCCeEEEEEe-CCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChH--------------------------HHHH
Q 020843 179 QDKWLLVNLQ-STKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSE--------------------------GKKV 231 (320)
Q Consensus 179 ~~K~LLV~l~-~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~e--------------------------g~~~ 231 (320)
.+||++|+|+ .+||+.|...-..+ .+...++-..++.++.++.++++ ...+
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l--~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~ 128 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIAL--DKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSI 128 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHH--HHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHH--HHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHH
Confidence 6899999999 99999998775332 11222232357888888877643 2346
Q ss_pred HHHcCCC-----CCcEEEEEecCCCceEEEEecCC----ChHHHHHHHHHHH
Q 020843 232 CTYYKLD-----SIPVVLVVDPITGQKMRSWCGMV----QPESLLEDLVPFM 274 (320)
Q Consensus 232 ~~~Y~v~-----~~P~i~Iidp~tG~~v~~~~G~~----~~~~fl~~L~~fl 274 (320)
++.|++. .+|+++|||+ .|+.+..+.|.. +++++++.|....
T Consensus 129 ~~~ygv~~~~g~~~p~~~lID~-~G~i~~~~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 129 SKDYNVLFDDSVSLRAFVLIDM-NGIVQHLLVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp HHHTTCEETTTEECEEEEEECT-TSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHHhCCccccCCcccEEEEECC-CCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 7778887 8999999997 599888876643 4788888888766
No 182
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.06 E-value=1.5e-05 Score=70.84 Aligned_cols=95 Identities=16% Similarity=0.095 Sum_probs=69.2
Q ss_pred cCCeEEEEEe-CCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChH--------------------------HHHH
Q 020843 179 QDKWLLVNLQ-STKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSE--------------------------GKKV 231 (320)
Q Consensus 179 ~~K~LLV~l~-~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~e--------------------------g~~~ 231 (320)
.+||+||+|+ ..||+.|...-..+ .+...++-..++.++.++.++.+ ...+
T Consensus 55 ~Gk~vll~F~pa~~Cp~C~~~~~~l--~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i 132 (220)
T 1zye_A 55 KGKYLVLFFYPLDFTFVCPTEIIAF--SDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQI 132 (220)
T ss_dssp TTSEEEEEECSCTTCSSSHHHHHHH--HHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHH--HHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHH
Confidence 5799999999 99999998764332 11222232347888888877642 2357
Q ss_pred HHHcCCC------CCcEEEEEecCCCceEEEEecC----CChHHHHHHHHHHHhc
Q 020843 232 CTYYKLD------SIPVVLVVDPITGQKMRSWCGM----VQPESLLEDLVPFMDG 276 (320)
Q Consensus 232 ~~~Y~v~------~~P~i~Iidp~tG~~v~~~~G~----~~~~~fl~~L~~fld~ 276 (320)
++.|++. .+|+++|||+ .|+.+..+.|. .+.+++++.|......
T Consensus 133 ~~~ygv~~~~~g~~~P~~~liD~-~G~I~~~~~g~~~~~~~~~ell~~l~~l~~~ 186 (220)
T 1zye_A 133 SRDYGVLLEGPGLALRGLFIIDP-NGVIKHLSVNDLPVGRSVEETLRLVKAFQFV 186 (220)
T ss_dssp HHHTTCEETTTTEECEEEEEECT-TSBEEEEEEECTTCCCCHHHHHHHHHHHHHT
T ss_pred HHHhCCeecCCCcccceEEEECC-CCEEEEEEecCCCCCCCHHHHHHHHHHhhhh
Confidence 7788887 8999999998 59988887775 3568888888877653
No 183
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.06 E-value=1.2e-05 Score=83.71 Aligned_cols=102 Identities=9% Similarity=0.051 Sum_probs=79.3
Q ss_pred cHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEe
Q 020843 168 SFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVD 247 (320)
Q Consensus 168 sf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iid 247 (320)
+-++..+.....+|+++|+|+++||.+|+.+...+ +.+.+.++.++.+..+|.+.. ..+++.|++.++|+++|+
T Consensus 663 ~~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~---~~la~~~~~~~~~~~vd~~~~--~~~~~~~~v~~~Pt~~~~- 736 (780)
T 3apo_A 663 TPQTFNEKVLQGKTHWVVDFYAPWSGPSQNFAPEF---ELLARMIKGKVRAGKVDCQAY--PQTCQKAGIKAYPSVKLY- 736 (780)
T ss_dssp CHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHHTTTCEEEEEETTTC--HHHHHHTTCCSSSEEEEE-
T ss_pred CHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHH---HHHHHHhcCCceEEEEECCCC--HHHHHhcCCCcCCEEEEE-
Confidence 44444445567899999999999999999986544 455555666788999988654 358889999999999999
Q ss_pred cCCCceEEEEec----CCChHHHHHHHHHHHhc
Q 020843 248 PITGQKMRSWCG----MVQPESLLEDLVPFMDG 276 (320)
Q Consensus 248 p~tG~~v~~~~G----~~~~~~fl~~L~~fld~ 276 (320)
+ .|+.+.++.| ..+.+++.+.|.+.+++
T Consensus 737 ~-~g~~~~~~~G~~~g~~~~~~l~~~l~~~l~~ 768 (780)
T 3apo_A 737 Q-YERAKKSIWEEQINSRDAKTIAALIYGKLET 768 (780)
T ss_dssp E-EETTTTEEEEEEECCCCHHHHHHHHHHHTTC
T ss_pred c-CCCccccccCcccCCcCHHHHHHHHHHHHHH
Confidence 3 4777766666 47999999999988864
No 184
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.05 E-value=5.1e-06 Score=70.99 Aligned_cols=92 Identities=13% Similarity=0.162 Sum_probs=64.0
Q ss_pred cCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHH-hcceEEEEeecC--------Ch-HHHHHHHH-cC-----------
Q 020843 179 QDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTI-STNFIFWQVYDD--------TS-EGKKVCTY-YK----------- 236 (320)
Q Consensus 179 ~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l-~~nFV~~q~d~~--------s~-eg~~~~~~-Y~----------- 236 (320)
++|++||+|+.+||..|...-..+ ..+.+-+ +.++.++.++.+ +. +..++++. |+
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l---~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~ 124 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRAL---QQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAV 124 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHH---HHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCC
T ss_pred CCCEEEEEEeccCCCCcHHHHHHH---HHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeeccc
Confidence 589999999999999998754322 1222222 235888888764 22 34555554 32
Q ss_pred ------------CCCCc-------EEEEEecCCCceEEEEecCCChHHHHHHHHHHH
Q 020843 237 ------------LDSIP-------VVLVVDPITGQKMRSWCGMVQPESLLEDLVPFM 274 (320)
Q Consensus 237 ------------v~~~P-------~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fl 274 (320)
+..+| +.+|||+ .|+.+.++.|..+++++.+.|.+.|
T Consensus 125 ~g~~~~~~~~~~~~~~P~~~~~~~~~~lid~-~G~i~~~~~g~~~~~~l~~~i~~ll 180 (181)
T 2p31_A 125 TGTGAHPAFKYLAQTSGKEPTWNFWKYLVAP-DGKVVGAWDPTVSVEEVRPQITALV 180 (181)
T ss_dssp SSTTSCHHHHHHHHHHSCCCCSTTCEEEECT-TSCEEEEECTTSCHHHHHHHHHTTC
T ss_pred CCccchhhhhhhhhcCCCccccceeEEEEcC-CCCEEEEeCCCCCHHHHHHHHHHHh
Confidence 22467 8999997 6999999999999998887776543
No 185
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.04 E-value=1.9e-05 Score=69.59 Aligned_cols=91 Identities=11% Similarity=0.084 Sum_probs=65.0
Q ss_pred hcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHH----hcceEEEEeecC--------C-hHHHHHHH------HcCC-
Q 020843 178 VQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTI----STNFIFWQVYDD--------T-SEGKKVCT------YYKL- 237 (320)
Q Consensus 178 ~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l----~~nFV~~q~d~~--------s-~eg~~~~~------~Y~v- 237 (320)
-++|++||+|+.+||.+|...- +.+.++. ...+.++.++.+ + .+..++++ .|++
T Consensus 45 ~~Gk~vlv~FwatwC~~C~~e~------p~l~~l~~~~~~~g~~vv~v~~d~~~~~e~d~~~~i~~f~~~~~~~~~~~~~ 118 (208)
T 2f8a_A 45 LRGKVLLIENVASLGGTTVRDY------TQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPN 118 (208)
T ss_dssp GTTSEEEEEEECSSSTTHHHHH------HHHHHHHHHHGGGTEEEEEEECCCSTTTTCSCHHHHHHHHHHTSSCTTCCCS
T ss_pred cCCCEEEEEEECCCCccHHHHH------HHHHHHHHHccCCCeEEEEEECCcccccCCCCHHHHHHHHHhcccccccccc
Confidence 3689999999999999998742 3333333 245888888764 1 23455554 3322
Q ss_pred ----------------------------------------------------CCCcEEEEEecCCCceEEEEecCCChHH
Q 020843 238 ----------------------------------------------------DSIPVVLVVDPITGQKMRSWCGMVQPES 265 (320)
Q Consensus 238 ----------------------------------------------------~~~P~i~Iidp~tG~~v~~~~G~~~~~~ 265 (320)
...|+.+|||+ .|+.+.++.|..++++
T Consensus 119 fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tflID~-~G~i~~~~~g~~~~~~ 197 (208)
T 2f8a_A 119 FMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGP-DGVPLRRYSRRFQTID 197 (208)
T ss_dssp SEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEEEECT-TSCEEEEECTTSCGGG
T ss_pred eEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCceEEEEcC-CCcEEEEeCCCCCHHH
Confidence 22388999997 6999999999999998
Q ss_pred HHHHHHHHHh
Q 020843 266 LLEDLVPFMD 275 (320)
Q Consensus 266 fl~~L~~fld 275 (320)
+.+.|...+.
T Consensus 198 l~~~I~~ll~ 207 (208)
T 2f8a_A 198 IEPDIEALLS 207 (208)
T ss_dssp GHHHHHHHHC
T ss_pred HHHHHHHHhh
Confidence 8888887764
No 186
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=98.02 E-value=3.9e-05 Score=62.49 Aligned_cols=96 Identities=10% Similarity=0.068 Sum_probs=72.2
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh---cceEEEEeecCChHHHHHHHHcCCCC--C
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS---TNFIFWQVYDDTSEGKKVCTYYKLDS--I 240 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~---~nFV~~q~d~~s~eg~~~~~~Y~v~~--~ 240 (320)
..+|++. .+..++++|+|+++ |.+|+.+. +.+.++-+ ..+.|..+|++.. .+++..|++.+ +
T Consensus 13 ~~~f~~~----~~~~~pv~v~f~a~-~~~c~~~~------p~l~~~A~~~~gk~~f~~vd~d~~--~~~a~~~gi~~~~i 79 (133)
T 2djk_A 13 PETYSDY----MSAGIPLAYIFAET-AEERKELS------DKLKPIAEAQRGVINFGTIDAKAF--GAHAGNLNLKTDKF 79 (133)
T ss_dssp HHHHHHH----HHTTSCEEEEECSC-SSSHHHHH------HHHHHHHHSSTTTSEEEEECTTTT--GGGTTTTTCCSSSS
T ss_pred hHHHHHH----hcCCCCEEEEEecC-hhhHHHHH------HHHHHHHHHhCCeEEEEEEchHHh--HHHHHHcCCCcccC
Confidence 3455543 35678999999999 78998774 44555444 4588999997743 35888999988 9
Q ss_pred cEEEEEecCCCceEEEEe--cCCChHHHHHHHHHHHh
Q 020843 241 PVVLVVDPITGQKMRSWC--GMVQPESLLEDLVPFMD 275 (320)
Q Consensus 241 P~i~Iidp~tG~~v~~~~--G~~~~~~fl~~L~~fld 275 (320)
|+++|+....|++. ... |.++.+.+.+.|..+++
T Consensus 80 Ptl~i~~~~~g~~~-~~~~~g~~~~~~l~~fi~~~l~ 115 (133)
T 2djk_A 80 PAFAIQEVAKNQKF-PFDQEKEITFEAIKAFVDDFVA 115 (133)
T ss_dssp SEEEEECTTTCCBC-CCCSSSCCCHHHHHHHHHHHHH
T ss_pred CEEEEEecCcCccc-CCCCccccCHHHHHHHHHHHHc
Confidence 99999985346664 555 99999999999998886
No 187
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.01 E-value=4.4e-05 Score=63.70 Aligned_cols=93 Identities=11% Similarity=0.151 Sum_probs=62.0
Q ss_pred cCCeEEEEEeCCCCc-chhhhhhccCCCHHHHHHHhc---ceEEEEeecC----ChH-HHHHHHH---------------
Q 020843 179 QDKWLLVNLQSTKEF-SSHMLNRDTWANEAVSQTIST---NFIFWQVYDD----TSE-GKKVCTY--------------- 234 (320)
Q Consensus 179 ~~K~LLV~l~~~~~f-~c~~lnRdvw~n~~V~~~l~~---nFV~~q~d~~----s~e-g~~~~~~--------------- 234 (320)
.+|++||+|+.+||. .|...-..+ ..+.+.+++ ++.++.++.+ +++ ..++++.
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l---~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~ 108 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHM---TDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYS 108 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHH---HHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSC
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHH---HHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCC
Confidence 589999999999999 896543221 223333332 2666666654 221 2222222
Q ss_pred ----------------------cCCCCCcEEEEEecCCCceEEEEecCC--ChHHHHHHHHHHHh
Q 020843 235 ----------------------YKLDSIPVVLVVDPITGQKMRSWCGMV--QPESLLEDLVPFMD 275 (320)
Q Consensus 235 ----------------------Y~v~~~P~i~Iidp~tG~~v~~~~G~~--~~~~fl~~L~~fld 275 (320)
|.+...|+++|||+ .|+.+..+.|.. +++++++.|...+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~-~G~i~~~~~g~~~~~~~~l~~~l~~ll~ 172 (174)
T 1xzo_A 109 QSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGP-DGKVLKDYNGVENTPYDDIISDVKSAST 172 (174)
T ss_dssp HHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECT-TSEEEEEEESSSSCCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECC-CCeEEEEEcCCCCCCHHHHHHHHHHHHh
Confidence 33456899999997 599999998875 58899999988764
No 188
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=98.01 E-value=1e-05 Score=80.47 Aligned_cols=103 Identities=9% Similarity=0.116 Sum_probs=71.4
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh--------cceEEEEeecCChHHHHHHHHcCC
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS--------TNFIFWQVYDDTSEGKKVCTYYKL 237 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~--------~nFV~~q~d~~s~eg~~~~~~Y~v 237 (320)
..+|++++. ...+|++||+|+++||.+|+.+...+ +.+.+.+. ..++|..+|.+.. ..+++.|+|
T Consensus 30 ~~~F~~~l~--~~~~k~VlV~FyA~WC~pCk~~~P~l---~~la~~~~~~~g~~~~~~v~f~~VD~d~~--~~la~~y~V 102 (470)
T 3qcp_A 30 GDDFSRVHR--VAPLCPWIVLFYNDGCGACRRYASTF---SKFAGGLKVEHGKDALQIATAAAVNCASE--VDLCRKYDI 102 (470)
T ss_dssp CSCGGGTCT--TGGGSCEEEEEECTTCHHHHHHHHHH---HHHHHTSCCSSCSSGGGGCEEEEEETTTC--HHHHHHTTC
T ss_pred HHHHHHHHH--hCCCCeEEEEEECCCCHHHHHHHHHH---HHHHHHHhhhcccccCceEEEEEEECCCC--HHHHHHcCC
Confidence 346665543 35679999999999999999996433 33333333 1489999998764 568999999
Q ss_pred CCCcEEEEEecCCCceEEEEe------------cCCChHHHHHHHHHHHh
Q 020843 238 DSIPVVLVVDPITGQKMRSWC------------GMVQPESLLEDLVPFMD 275 (320)
Q Consensus 238 ~~~P~i~Iidp~tG~~v~~~~------------G~~~~~~fl~~L~~fld 275 (320)
..+|+++|+++..+..+.++. ..++.+++...+...+.
T Consensus 103 ~~~PTlilf~~gg~~~~~~y~G~r~~e~L~fI~k~l~~~eLe~~~e~Lin 152 (470)
T 3qcp_A 103 NFVPRLFFFYPRDSCRSNEECGTSSLEHVAFENSHLEVDELESEVRRLVN 152 (470)
T ss_dssp CSSCEEEEEEESSCCCTTSCCCCCCEEEEECSCTTCCHHHHHHHHHHHHH
T ss_pred CccCeEEEEECCCceEEEEeeCCCCHHHHHHHHHhcCHHHHHHHHHHHhh
Confidence 999999999864332222222 23677777777666654
No 189
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.00 E-value=8.6e-06 Score=80.53 Aligned_cols=99 Identities=13% Similarity=0.132 Sum_probs=75.3
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh---cceEEEEeecCChHHHHHHHHcCCCCCcE
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS---TNFIFWQVYDDTSEGKKVCTYYKLDSIPV 242 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~---~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~ 242 (320)
..+|++.. ...+|++||+|+++||..|+.+...+ ..+.+.+. .++++..+|.+..+ ... |++.++|+
T Consensus 365 ~~~f~~~v---~~~~k~vlv~F~a~wC~~C~~~~p~~---~~l~~~~~~~~~~v~~~~vd~~~~~---~~~-~~v~~~Pt 434 (504)
T 2b5e_A 365 GKNHDEIV---NDPKKDVLVLYYAPWCGHCKRLAPTY---QELADTYANATSDVLIAKLDHTEND---VRG-VVIEGYPT 434 (504)
T ss_dssp TTTHHHHH---HCTTCCEEEEEECTTCHHHHHHHHHH---HHHHHHHHHHCSSCEEEEEEGGGCC---CSS-CCCSSSSE
T ss_pred cccHHHhh---ccCCCCEEEEEECCCChhHHHHhHHH---HHHHHHhhccCCcEEEEEecCCccc---ccc-CCceecCe
Confidence 34676654 45789999999999999999997543 34444443 37999999987544 223 99999999
Q ss_pred EEEEecCCCce--EEEEecCCChHHHHHHHHHHHhc
Q 020843 243 VLVVDPITGQK--MRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 243 i~Iidp~tG~~--v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
++++ + .|+. +.++.|..+.+.+++.|.+.+..
T Consensus 435 ~~~~-~-~G~~~~~~~~~G~~~~~~l~~~i~~~~~~ 468 (504)
T 2b5e_A 435 IVLY-P-GGKKSESVVYQGSRSLDSLFDFIKENGHF 468 (504)
T ss_dssp EEEE-C-CTTSCCCCBCCSCCCHHHHHHHHHHHCTT
T ss_pred EEEE-e-CCceecceEecCCCCHHHHHHHHHhcCCC
Confidence 9999 4 4765 56678999999999999887654
No 190
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=97.99 E-value=3.7e-05 Score=69.36 Aligned_cols=87 Identities=10% Similarity=0.102 Sum_probs=66.6
Q ss_pred cCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh----cceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCCceE
Q 020843 179 QDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS----TNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKM 254 (320)
Q Consensus 179 ~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~----~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v 254 (320)
.++.++|+|+++||..|+.+...+ ..+..... .++.+..+|.+.. ..+++.|++.++|+++| .|+.+
T Consensus 137 ~~~~~vv~F~a~wC~~C~~~~p~l---~~la~~~~~~~~~~v~~~~vd~~~~--~~~~~~~~V~~vPt~~i----~G~~~ 207 (243)
T 2hls_A 137 KGRVHIETIITPSCPYCPYAVLLA---HMFAYEAWKQGNPVILSEAVEAYEN--PDIADKYGVMSVPSIAI----NGYLV 207 (243)
T ss_dssp CSCEEEEEEECSSCSSHHHHHHHH---HHHHHHHHHTTCCCEEEEEEETTTC--HHHHHHTTCCSSSEEEE----TTEEE
T ss_pred CCCcEEEEEECCCCCCcHHHHHHH---HHHHHHcccccCCcEEEEEEECccC--HHHHHHcCCeeeCeEEE----CCEEE
Confidence 577889999999999999885432 12222221 4688888887653 35778899999999988 47654
Q ss_pred EEEecCCChHHHHHHHHHHHhc
Q 020843 255 RSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 255 ~~~~G~~~~~~fl~~L~~fld~ 276 (320)
+.|..+.++|++.|.+.+..
T Consensus 208 --~~G~~~~~~l~~~l~~~~~~ 227 (243)
T 2hls_A 208 --FVGVPYEEDFLDYVKSAAEG 227 (243)
T ss_dssp --EESCCCHHHHHHHHHHHHTT
T ss_pred --EeCCCCHHHHHHHHHHHhhc
Confidence 78999999999999998865
No 191
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=97.99 E-value=2.2e-05 Score=67.18 Aligned_cols=92 Identities=11% Similarity=0.092 Sum_probs=61.8
Q ss_pred hcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHH-hcceEEEEeecCC---------hHHHHHHHHcCC----------
Q 020843 178 VQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTI-STNFIFWQVYDDT---------SEGKKVCTYYKL---------- 237 (320)
Q Consensus 178 ~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l-~~nFV~~q~d~~s---------~eg~~~~~~Y~v---------- 237 (320)
-++||+||+|..+||..|...-..+ ..+.+-+ ..++.++.++.+. .+..++++.|++
T Consensus 47 ~~Gk~vlv~F~atwC~~C~~~~~~l---~~l~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~ 123 (185)
T 2gs3_A 47 YRGFVCIVTNVASQGGKTEVNYTQL---VDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICV 123 (185)
T ss_dssp GTTSEEEEEEECSSSTTHHHHHHHH---HHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHTTCCSEEBCCCBS
T ss_pred cCCCEEEEEEecCCCCchHHHHHHH---HHHHHHhhcCCeEEEEEECcccCCCCCCCHHHHHHHHHHcCCCCeeeeeecc
Confidence 3689999999999999997653221 1222222 2357777776541 224555554432
Q ss_pred --------------------------CCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHH
Q 020843 238 --------------------------DSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPF 273 (320)
Q Consensus 238 --------------------------~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~f 273 (320)
..+|+++|||+ .|+.+.++.|..+++++.+.|.+.
T Consensus 124 ~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~i~~l 184 (185)
T 2gs3_A 124 NGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDK-NGCVVKRYGPMEEPLVIEKDLPHY 184 (185)
T ss_dssp SSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECT-TSCEEEEECTTSCGGGGGGGHHHH
T ss_pred CChhhhHHHHHHHhhcccccccCCcccccceEEEECC-CCCEEEeeCCCCCHHHHHHHHHHh
Confidence 11489999997 699999999988888887777654
No 192
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=97.07 E-value=2.1e-06 Score=69.28 Aligned_cols=75 Identities=19% Similarity=0.226 Sum_probs=53.4
Q ss_pred hcCC-eEEEEEeCCCCcchhhhhhccCCCHHHHHHH---hcceEEEEeecCChH-----------------------HHH
Q 020843 178 VQDK-WLLVNLQSTKEFSSHMLNRDTWANEAVSQTI---STNFIFWQVYDDTSE-----------------------GKK 230 (320)
Q Consensus 178 ~~~K-~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l---~~nFV~~q~d~~s~e-----------------------g~~ 230 (320)
-++| ++||+|+++||..|+.+...+ ..+.+.+ ..++.++.++.+... ...
T Consensus 23 ~~gk~~vll~F~a~wC~~C~~~~~~l---~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (143)
T 2lus_A 23 LKDKDIIGFYFSAHWCPPCRGFTPIL---ADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASN 99 (143)
Confidence 3567 999999999999998886543 2233333 135666666655331 246
Q ss_pred HHHHcCCCCCcEEEEEecCCCceEEE
Q 020843 231 VCTYYKLDSIPVVLVVDPITGQKMRS 256 (320)
Q Consensus 231 ~~~~Y~v~~~P~i~Iidp~tG~~v~~ 256 (320)
+++.|++..+|+++|||+ .|+.+.+
T Consensus 100 ~~~~~~v~~~P~~~lid~-~G~i~~~ 124 (143)
T 2lus_A 100 VTAKYGITGIPALVIVKK-DGTLISM 124 (143)
Confidence 888899999999999997 5887765
No 193
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=97.84 E-value=8.4e-05 Score=61.97 Aligned_cols=89 Identities=9% Similarity=0.080 Sum_probs=65.0
Q ss_pred cCCeEEEEEeCCC-CcchhhhhhccCCCHHHHHHHh--cceEEEEeecCCh---------------------HHHHHHHH
Q 020843 179 QDKWLLVNLQSTK-EFSSHMLNRDTWANEAVSQTIS--TNFIFWQVYDDTS---------------------EGKKVCTY 234 (320)
Q Consensus 179 ~~K~LLV~l~~~~-~f~c~~lnRdvw~n~~V~~~l~--~nFV~~q~d~~s~---------------------eg~~~~~~ 234 (320)
.+||++|+|+..| |..|...- +.+.++.+ .++.++.++.+++ ....+.+.
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~------~~l~~l~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 116 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQT------RRFNEEAAKLGDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEA 116 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTH------HHHHHHHHHHSSCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHH
T ss_pred CCCeEEEEEecCCCCCchHHHH------HHHHHHHHHcCCCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHH
Confidence 5899999999998 99998764 33333333 5677777776642 23467778
Q ss_pred cCCCC------CcEEEEEecCCCceEEEEecC-----CChHHHHHHHHHHH
Q 020843 235 YKLDS------IPVVLVVDPITGQKMRSWCGM-----VQPESLLEDLVPFM 274 (320)
Q Consensus 235 Y~v~~------~P~i~Iidp~tG~~v~~~~G~-----~~~~~fl~~L~~fl 274 (320)
|++.. +|+++|||+ .|+.+..+.|. .+.+++++.|++.+
T Consensus 117 ~~v~~~~~g~~~p~~~lid~-~G~i~~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 117 FGVYIKELRLLARSVFVLDE-NGKVVYAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp TTCBBTTTCSBCCEEEEECT-TSCEEEEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred hCCccccCCceeeEEEEEcC-CCcEEEEEecCCcCCCCCHHHHHHHHHHhh
Confidence 88754 499999997 59998887653 24588998888765
No 194
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=97.83 E-value=0.00017 Score=64.20 Aligned_cols=96 Identities=11% Similarity=0.041 Sum_probs=64.1
Q ss_pred HhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecC--------C-hHHHHHHH------HcCCC---
Q 020843 177 SVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDD--------T-SEGKKVCT------YYKLD--- 238 (320)
Q Consensus 177 k~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~--------s-~eg~~~~~------~Y~v~--- 238 (320)
.=++|++||+|.++||.+|..|.. + ++...++=...|.++.+..+ + .+-.++++ .|++.
T Consensus 53 d~~GKvvll~FwAt~C~~c~e~p~--L-~~l~~~~~~~g~~Vlgvs~d~f~~~e~~~~~~i~~f~~~~~~~~~~~~~fpl 129 (215)
T 2i3y_A 53 QYVGKHILFVNVATYCGLTAQYPE--L-NALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPSFQL 129 (215)
T ss_dssp GGTTSEEEEEEECSSSGGGGGHHH--H-HHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHTSSCTTCCCSSEE
T ss_pred HhCCCEEEEEEeCCCCCChHhHHH--H-HHHHHHhccCCeEEEEEEccccCcCCCCCHHHHHHHHHhccchhccCcccee
Confidence 346899999999999999975531 1 11112222345777776532 1 22345555 44320
Q ss_pred ----------------------------------------------CCcEEEEEecCCCceEEEEecCCChHHHHHHHHH
Q 020843 239 ----------------------------------------------SIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVP 272 (320)
Q Consensus 239 ----------------------------------------------~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~ 272 (320)
-.|+.+|||+ .|+.+.++.|..+++++.+.|..
T Consensus 130 l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~-~G~vv~~~~g~~~~~~l~~~I~~ 208 (215)
T 2i3y_A 130 FEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGP-DGIPVMRWSHRATVSSVKTDILA 208 (215)
T ss_dssp BCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECT-TSCEEEEECTTSCHHHHHHHHHH
T ss_pred EeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEECC-CCeEEEEeCCCCCHHHHHHHHHH
Confidence 0168899997 69999999998999999988888
Q ss_pred HHhc
Q 020843 273 FMDG 276 (320)
Q Consensus 273 fld~ 276 (320)
.|.+
T Consensus 209 ll~~ 212 (215)
T 2i3y_A 209 YLKQ 212 (215)
T ss_dssp HGGG
T ss_pred HHHH
Confidence 8754
No 195
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=97.78 E-value=0.00025 Score=60.87 Aligned_cols=122 Identities=14% Similarity=0.076 Sum_probs=75.1
Q ss_pred cCCeEEEEEeC-CCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChH-HHHHHHHc---------------------
Q 020843 179 QDKWLLVNLQS-TKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSE-GKKVCTYY--------------------- 235 (320)
Q Consensus 179 ~~K~LLV~l~~-~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~e-g~~~~~~Y--------------------- 235 (320)
++||++|+|+. .||+.|..--..+ ++...++-..++.++.+..++++ ..++++.+
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l--~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ 106 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDV--ADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRN 106 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHH--HHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHH
T ss_pred CCCeEEEEEECCCCCCccHHHHHHH--HHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHH
Confidence 58999999995 8999997643221 11112222346777777777654 34444444
Q ss_pred -CCC------CCcEEEEEecCCCceEEEEecCC----ChHHHHHHHHHHHhcCCCcccccCCCCCCCCCCCCCCCccch
Q 020843 236 -KLD------SIPVVLVVDPITGQKMRSWCGMV----QPESLLEDLVPFMDGGPREQHAKVSHKRPRGSSTTPQQKNKG 303 (320)
Q Consensus 236 -~v~------~~P~i~Iidp~tG~~v~~~~G~~----~~~~fl~~L~~fld~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 303 (320)
++. ..|+.+|||+ .|+.+..+.|.. +.+++++.|.............++-+=++-+....+.+...|
T Consensus 107 ygv~~~~~g~~~p~~~lID~-~G~i~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~p~~~~p~~w~~~~~~~~~~~~~~~ 184 (186)
T 1n8j_A 107 FDNMREDEGLADRATFVVDP-QGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWKEGEATLAPSLDLVG 184 (186)
T ss_dssp TTCEETTTTEECEEEEEECT-TSBEEEEEEECTTBCCCHHHHHHHHHHHHHHHHSTTCBBCTTCCTTSCCBCCSSTTTT
T ss_pred hCCccCCCCceeeEEEEECC-CCeEEEEEecCCCCCCCHHHHHHHHHHHHHHhhcCCCccCCCCCCCCccccCChHhcc
Confidence 332 2699999997 599888877643 578888888776542222122344455555566655555444
No 196
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=97.77 E-value=0.0001 Score=61.08 Aligned_cols=91 Identities=14% Similarity=0.299 Sum_probs=58.4
Q ss_pred cCCeEEEEEeC-CCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChH-HHH------------------HHHHcCCC
Q 020843 179 QDKWLLVNLQS-TKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSE-GKK------------------VCTYYKLD 238 (320)
Q Consensus 179 ~~K~LLV~l~~-~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~e-g~~------------------~~~~Y~v~ 238 (320)
.+||++|+|+. .||..|...-..+ ++...++=..++.++.+..++++ ..+ +++.|++.
T Consensus 34 ~gk~~vl~F~~~~~c~~C~~~~~~l--~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 111 (163)
T 3gkn_A 34 AGHWLVIYFYPKDSTPGATTEGLDF--NALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVI 111 (163)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHH--HHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCE
T ss_pred CCCcEEEEEeCCCCCCcHHHHHHHH--HHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCc
Confidence 57899999997 9999998764322 11222222346888888877654 233 44455554
Q ss_pred C------------CcEEEEEecCCCceEEEEecCC---ChHHHHHHHHH
Q 020843 239 S------------IPVVLVVDPITGQKMRSWCGMV---QPESLLEDLVP 272 (320)
Q Consensus 239 ~------------~P~i~Iidp~tG~~v~~~~G~~---~~~~fl~~L~~ 272 (320)
. .|+++|||+ .|+.+..+.|.. ..+++++.|++
T Consensus 112 ~~~~~~~~~~~~~~p~~~lid~-~G~i~~~~~~~~~~~~~~~il~~l~~ 159 (163)
T 3gkn_A 112 KEKNMYGKQVLGIERSTFLLSP-EGQVVQAWRKVKVAGHADAVLAALKA 159 (163)
T ss_dssp EEEEETTEEEEEECCEEEEECT-TSCEEEEECSCCSTTHHHHHHHHHHH
T ss_pred cccccccccccCcceEEEEECC-CCeEEEEEcCCCcccCHHHHHHHHHH
Confidence 4 899999998 599888875532 23445554443
No 197
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=97.77 E-value=3.8e-05 Score=68.14 Aligned_cols=91 Identities=11% Similarity=0.095 Sum_probs=62.7
Q ss_pred hcCCeEEEEEeC-CCCcchhhhhhccCCCHHHHHHHh-cceEEEEeecCChHH--------------------------H
Q 020843 178 VQDKWLLVNLQS-TKEFSSHMLNRDTWANEAVSQTIS-TNFIFWQVYDDTSEG--------------------------K 229 (320)
Q Consensus 178 ~~~K~LLV~l~~-~~~f~c~~lnRdvw~n~~V~~~l~-~nFV~~q~d~~s~eg--------------------------~ 229 (320)
-.+|++||+|+. .||..|...-..+ ..+.+-++ .++.++.++.++.+. .
T Consensus 67 ~~Gk~vll~F~a~~wC~~C~~~~p~l---~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~ 143 (222)
T 3ztl_A 67 YRGKYVVLFFYPADFTFVCPTEIIAF---SDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQ 143 (222)
T ss_dssp GTTSEEEEEECSCSSCSHHHHHHHHH---HHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSS
T ss_pred hCCCeEEEEEECCCCCCchHHHHHHH---HHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCch
Confidence 368999999995 9999998864322 12222222 458888888876431 2
Q ss_pred HHHHHcCCC------CCcEEEEEecCCCceEEEEecCC----ChHHHHHHHHH
Q 020843 230 KVCTYYKLD------SIPVVLVVDPITGQKMRSWCGMV----QPESLLEDLVP 272 (320)
Q Consensus 230 ~~~~~Y~v~------~~P~i~Iidp~tG~~v~~~~G~~----~~~~fl~~L~~ 272 (320)
.+.+.|++. .+|+++|||+ .|+.+..+.|.. ..+++++.|..
T Consensus 144 ~~~~~ygv~~~~~g~~~P~~~lID~-~G~I~~~~~g~~~~~~~~~~il~~l~~ 195 (222)
T 3ztl_A 144 EISKAYGVFDEEDGNAFRGLFIIDP-NGILRQITINDKPVGRSVDETLRLLDA 195 (222)
T ss_dssp HHHHHTTCBCTTTSSBCEEEEEECT-TSEEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred HHHHHcCCeecCCCCccceEEEECC-CCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 455677776 8999999997 599888877753 34566655544
No 198
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=97.77 E-value=0.00022 Score=62.99 Aligned_cols=35 Identities=17% Similarity=0.352 Sum_probs=30.5
Q ss_pred cEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 241 PVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 241 P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
|+.+|||+ .|+.+.++.|..+++++...|...|.+
T Consensus 160 ~ttflID~-~G~i~~~~~g~~~~~~l~~~I~~ll~~ 194 (207)
T 2r37_A 160 FEKFLVGP-DGIPIMRWHHRTTVSNVKMDILSYMRR 194 (207)
T ss_dssp TCEEEECT-TSCEEEEECTTSCHHHHHHHHHHHHHH
T ss_pred ceEEEECC-CCcEEEEECCCCCHHHHHHHHHHHHhh
Confidence 68899997 699999999989999998888888764
No 199
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=97.74 E-value=0.00015 Score=65.95 Aligned_cols=97 Identities=18% Similarity=0.208 Sum_probs=71.5
Q ss_pred ccccHHHHHHHHHhcCCeEEEEEeC--CCCcchhhhhhccCCCHHHHHHHh--cceEEEEeecCC---hHHHHHHHHcCC
Q 020843 165 FNGSFEKAKDAASVQDKWLLVNLQS--TKEFSSHMLNRDTWANEAVSQTIS--TNFIFWQVYDDT---SEGKKVCTYYKL 237 (320)
Q Consensus 165 ~~gsf~~A~~~Ak~~~K~LLV~l~~--~~~f~c~~lnRdvw~n~~V~~~l~--~nFV~~q~d~~s---~eg~~~~~~Y~v 237 (320)
...+|++++ ..++++||+|++ +||.-.+.| +.+.+.+. .+++|..+|++. .+...+++.|+|
T Consensus 11 t~~nF~~~i----~~~~~vlV~FyA~~pWCgl~P~~-------e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V 79 (240)
T 2qc7_A 11 DTVTFYKVI----PKSKFVLVKFDTQYPYGEKQDEF-------KRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKL 79 (240)
T ss_dssp CTTHHHHHG----GGCSEEEEEECCSSCCSHHHHHH-------HHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTC
T ss_pred CHHHHHHHH----cCCCCEEEEEeCCCCCCcchHHH-------HHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCC
Confidence 345787765 467899999999 999822222 34444443 469999999764 345779999999
Q ss_pred C--CCcEEEEEecCCCc--eEEEEecCCChHHHHHHHHHHH
Q 020843 238 D--SIPVVLVVDPITGQ--KMRSWCGMVQPESLLEDLVPFM 274 (320)
Q Consensus 238 ~--~~P~i~Iidp~tG~--~v~~~~G~~~~~~fl~~L~~fl 274 (320)
. +||+|.++.. |+ .+..+.|..+.+.+++.|.+.+
T Consensus 80 ~~~~~PTl~~f~~--G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 80 DKESYPVFYLFRD--GDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp CGGGCSEEEEEET--TCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred CCCCCCEEEEEeC--CCcCcceeecCCCCHHHHHHHHHHhc
Confidence 9 9999999963 66 3567789889888877776654
No 200
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=97.73 E-value=7.2e-05 Score=63.45 Aligned_cols=74 Identities=11% Similarity=0.060 Sum_probs=55.2
Q ss_pred cCCeEEEEEeCCC-CcchhhhhhccCCCHHHHHHHh-cceEEEEeecCChHH--------------------HHHHHHcC
Q 020843 179 QDKWLLVNLQSTK-EFSSHMLNRDTWANEAVSQTIS-TNFIFWQVYDDTSEG--------------------KKVCTYYK 236 (320)
Q Consensus 179 ~~K~LLV~l~~~~-~f~c~~lnRdvw~n~~V~~~l~-~nFV~~q~d~~s~eg--------------------~~~~~~Y~ 236 (320)
.+||++|+|+..| |..|...- +.+.++.+ .++.++.++.++++. ..+.+.|+
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~------~~l~~l~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 116 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSV------RTFDERAAASGATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYG 116 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHH------HHHHHHHHHTTCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTT
T ss_pred CCCEEEEEEEeCCCCchHHHHH------HHHHHHHhhcCCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhC
Confidence 4899999999998 99998763 45555544 567777877775431 34677888
Q ss_pred CCCC---------cEEEEEecCCCceEEEEec
Q 020843 237 LDSI---------PVVLVVDPITGQKMRSWCG 259 (320)
Q Consensus 237 v~~~---------P~i~Iidp~tG~~v~~~~G 259 (320)
+... |+++|||+ .|+.+..+.|
T Consensus 117 v~~~~~~~~g~~~p~~~lid~-~G~I~~~~~g 147 (175)
T 1xvq_A 117 VTIADGPMAGLLARAIVVIGA-DGNVAYTELV 147 (175)
T ss_dssp CBBCSSTTTTSBCSEEEEECT-TSBEEEEEEC
T ss_pred CcccccccCCcccceEEEECC-CCeEEEEEEC
Confidence 7655 99999997 6999888764
No 201
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=97.72 E-value=0.00023 Score=60.19 Aligned_cols=98 Identities=14% Similarity=0.088 Sum_probs=63.8
Q ss_pred cCCeEEEEEeCCCCc-chhhhhhccCCCHHHHHHHh---cceEEEEeecC-----------------------------C
Q 020843 179 QDKWLLVNLQSTKEF-SSHMLNRDTWANEAVSQTIS---TNFIFWQVYDD-----------------------------T 225 (320)
Q Consensus 179 ~~K~LLV~l~~~~~f-~c~~lnRdvw~n~~V~~~l~---~nFV~~q~d~~-----------------------------s 225 (320)
.+||+||+|...||. .|...-..+ ..+.+-++ .++.++.+..+ .
T Consensus 27 ~Gk~vll~F~~t~C~~~C~~~~~~l---~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~ 103 (170)
T 3me7_A 27 KGKPIILSPIYTHCRAACPLITKSL---LKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTS 103 (170)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHH---HTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSH
T ss_pred CCCEEEEEEECCCCCchhHHHHHHH---HHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCH
Confidence 489999999999997 586543221 11122221 23444443322 1
Q ss_pred hHHHHHHHHcCC---------CCCcEEEEEecCCCceEEEEecC-CChHHHHHHHHHHHhcCCCc
Q 020843 226 SEGKKVCTYYKL---------DSIPVVLVVDPITGQKMRSWCGM-VQPESLLEDLVPFMDGGPRE 280 (320)
Q Consensus 226 ~eg~~~~~~Y~v---------~~~P~i~Iidp~tG~~v~~~~G~-~~~~~fl~~L~~fld~~~~d 280 (320)
.+..++++.|++ ...|+++|||| .|+.+..+.|. .++++++..|.+.+.....-
T Consensus 104 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~-~G~i~~~~~g~~~~~~~i~~~l~~~~~~~~~~ 167 (170)
T 3me7_A 104 EDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSP-ELQIKDYIYGVNYNYLEFVNALRLARGEGHHH 167 (170)
T ss_dssp HHHHHHHHHTTCCCEEETTEEECCCEEEEECT-TSBEEEEEESSSCCHHHHHHHHHHHTTCSCTT
T ss_pred HHHHHHHHHCCeEEecCCCccccCceEEEECC-CCeEEEEEeCCCCCHHHHHHHHHHhhcccccc
Confidence 234566666553 35689999998 59988888886 68999999999887665443
No 202
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=97.71 E-value=0.00024 Score=64.82 Aligned_cols=98 Identities=18% Similarity=0.193 Sum_probs=73.1
Q ss_pred cccccHHHHHHHHHhcCCeEEEEEe--CCCCcchhhhhhccCCCHHHHHHHh---cceEEEEeecCC---hHHHHHHHHc
Q 020843 164 MFNGSFEKAKDAASVQDKWLLVNLQ--STKEFSSHMLNRDTWANEAVSQTIS---TNFIFWQVYDDT---SEGKKVCTYY 235 (320)
Q Consensus 164 ~~~gsf~~A~~~Ak~~~K~LLV~l~--~~~~f~c~~lnRdvw~n~~V~~~l~---~nFV~~q~d~~s---~eg~~~~~~Y 235 (320)
+...+|++++ ..++++||+|+ ++||. |. -+| +.+.+-+. .+++|..+|++. .+...+++.|
T Consensus 21 Lt~~nF~~vi----~~~~~vlV~Fy~~ApWCg----l~-P~~--e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~ 89 (248)
T 2c0g_A 21 LDELSFEKTV----ERFPYSVVKFDIASPYGE----KH-EAF--TAFSKSAHKATKDLLIATVGVKDYGELENKALGDRY 89 (248)
T ss_dssp CCTTTHHHHH----TTSSEEEEEEEESSCCSH----HH-HHH--HHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHT
T ss_pred CCHHHHHHHH----hcCCCEEEEEECCCCCCc----cH-HHH--HHHHHHHhccCCCeEEEEEECCcccccccHHHHHHh
Confidence 3456888855 56789999999 99997 32 122 34444443 379999999876 3367799999
Q ss_pred CCC--CCcEEEEEecCCCce--EEEE--ecCCChHHHHHHHHHHHh
Q 020843 236 KLD--SIPVVLVVDPITGQK--MRSW--CGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 236 ~v~--~~P~i~Iidp~tG~~--v~~~--~G~~~~~~fl~~L~~fld 275 (320)
+|. +||+|.++- |+. ...+ .|..+.+.+.+.|.+.+.
T Consensus 90 ~V~~~~~PTl~~F~---G~~~~~~~y~~~G~~~~~~L~~fi~~~~~ 132 (248)
T 2c0g_A 90 KVDDKNFPSIFLFK---GNADEYVQLPSHVDVTLDNLKAFVSANTP 132 (248)
T ss_dssp TCCTTSCCEEEEES---SSSSSEEECCTTSCCCHHHHHHHHHHHSS
T ss_pred CCCcCCCCeEEEEe---CCcCcceeecccCCCCHHHHHHHHHHhhc
Confidence 999 999999995 652 4556 788999988888887765
No 203
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.69 E-value=8.6e-05 Score=57.89 Aligned_cols=83 Identities=18% Similarity=0.117 Sum_probs=57.1
Q ss_pred cCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCCceEEEEe
Q 020843 179 QDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSWC 258 (320)
Q Consensus 179 ~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~ 258 (320)
..+..++.|+.+||..|+.+..-+ . -+..++-|..+|+++++...++..|+ .++|+++ ++ |+.+ .+
T Consensus 14 ~~~~~v~~f~~~~C~~C~~~~~~L-~------~l~~~i~~~~vdi~~~~~~el~~~~g-~~vP~l~-~~---g~~~-~~- 79 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCDEAKEVL-Q------PYKDRFILQEVDITLPENSTWYERYK-FDIPVFH-LN---GQFL-MM- 79 (100)
T ss_dssp CCCCEEEEEECSSCHHHHHHHHHT-S------TTSSSSEEEEEETTSSTTHHHHHHSS-SSCSEEE-ES---SSEE-EE-
T ss_pred CCCCEEEEEeCCCCcchHHHHHHH-H------HhhhCCeEEEEECCCcchHHHHHHHC-CCCCEEE-EC---CEEE-Ee-
Confidence 346678889999999998885322 1 11234677888888556688999999 9999874 43 6655 33
Q ss_pred cCCChHHHHHHHHHHHh
Q 020843 259 GMVQPESLLEDLVPFMD 275 (320)
Q Consensus 259 G~~~~~~fl~~L~~fld 275 (320)
|..+++.+.+.|..+++
T Consensus 80 ~g~~~~~l~~~l~~~~~ 96 (100)
T 1wjk_A 80 HRVNTSKLEKQLRKLSG 96 (100)
T ss_dssp SSCCHHHHHHHHHSSSC
T ss_pred cCCCHHHHHHHHHHHHh
Confidence 44788877666655443
No 204
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=97.68 E-value=0.00021 Score=62.72 Aligned_cols=91 Identities=11% Similarity=0.077 Sum_probs=62.6
Q ss_pred hcCCeEEEEEe-----CCCCcchhhhhhccCCCHHHH-HHH-hcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCC
Q 020843 178 VQDKWLLVNLQ-----STKEFSSHMLNRDTWANEAVS-QTI-STNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPIT 250 (320)
Q Consensus 178 ~~~K~LLV~l~-----~~~~f~c~~lnRdvw~n~~V~-~~l-~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~t 250 (320)
+..++++|.++ ++||..|+.|-..+ ..+. ++. ..+..+..+|.+. ...+++.|+|..||++.++. .
T Consensus 18 ~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~---~~~a~~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Ptl~~~~--~ 90 (229)
T 2ywm_A 18 EFKEPVSIKLFSQAIGCESCQTAEELLKET---VEVIGEAVGQDKIKLDIYSPFT--HKEETEKYGVDRVPTIVIEG--D 90 (229)
T ss_dssp HCCSCEEEEEECCCTTCGGGGHHHHHHHHH---HHHHHHHHCTTTEEEEEECTTT--CHHHHHHTTCCBSSEEEEES--S
T ss_pred hccCCeEEEEEccCCCCcccHHHHHHHHHH---HHHHhccCCCCceEEEEecCcc--cHHHHHHcCCCcCcEEEEEC--C
Confidence 44566666666 55666676664331 1221 222 4678888888764 46799999999999999996 3
Q ss_pred CceEEEEecCCChHHHHHHHHHHHh
Q 020843 251 GQKMRSWCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 251 G~~v~~~~G~~~~~~fl~~L~~fld 275 (320)
|....++.|..+.+++...+...+.
T Consensus 91 ~~~~~~~~G~~~~~~l~~~~~~~~~ 115 (229)
T 2ywm_A 91 KDYGIRYIGLPAGLEFTTLINGIFH 115 (229)
T ss_dssp SCCCEEEESCCCTTHHHHHHHHHHH
T ss_pred CcccceecCCccHHHHHHHHHHHHh
Confidence 5666778898888888777777664
No 205
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=97.68 E-value=5.8e-05 Score=59.21 Aligned_cols=76 Identities=8% Similarity=0.133 Sum_probs=50.5
Q ss_pred HHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChH---HHHHHHHcCCCCCcEEEEEe
Q 020843 171 KAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSE---GKKVCTYYKLDSIPVVLVVD 247 (320)
Q Consensus 171 ~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~e---g~~~~~~Y~v~~~P~i~Iid 247 (320)
+.++...+ ++.|+| |+++||..|+.+.. .+. -+...|.++.++.+... ...+.+.|++.++|++ ++
T Consensus 11 ~~~~~~~~-~~~vv~-f~a~~C~~C~~~~~------~l~-~~~~~~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~-~~- 79 (116)
T 2e7p_A 11 KKAKELAS-SAPVVV-FSKTYCGYCNRVKQ------LLT-QVGASYKVVELDELSDGSQLQSALAHWTGRGTVPNV-FI- 79 (116)
T ss_dssp HHHHHHHT-SSSEEE-EECTTCHHHHHHHH------HHH-HHTCCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE-EE-
T ss_pred HHHHHHHc-CCCEEE-EECCCChhHHHHHH------HHH-HcCCCeEEEEccCCCChHHHHHHHHHHhCCCCcCEE-EE-
Confidence 34444444 456666 99999999998853 233 33456777777765431 2568889999999999 55
Q ss_pred cCCCceEEEEec
Q 020843 248 PITGQKMRSWCG 259 (320)
Q Consensus 248 p~tG~~v~~~~G 259 (320)
.|+.+..+.|
T Consensus 80 --~g~~v~~~~~ 89 (116)
T 2e7p_A 80 --GGKQIGGCDT 89 (116)
T ss_dssp --TTEEEECHHH
T ss_pred --CCEEECChHH
Confidence 3777665544
No 206
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=97.68 E-value=0.00012 Score=66.82 Aligned_cols=94 Identities=13% Similarity=0.021 Sum_probs=66.7
Q ss_pred cCCeE-EEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChH-------------------------HHHHH
Q 020843 179 QDKWL-LVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSE-------------------------GKKVC 232 (320)
Q Consensus 179 ~~K~L-LV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~e-------------------------g~~~~ 232 (320)
.+||+ |+++..+||+.|...-..+ ++...++-+.++.++.+++++.+ ...++
T Consensus 32 ~GK~vVL~~fpa~~CpvC~tEl~~l--~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia 109 (249)
T 3a2v_A 32 QGKWFVLFSHPADFTPVCTTEFVSF--ARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVA 109 (249)
T ss_dssp TTCEEEEECCSCTTCHHHHHHHHHH--HHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHH
T ss_pred CCCEEEEEEEcCCCCcChHHHHHHH--HHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHH
Confidence 68985 5578899999998764322 11223333457889999888743 23577
Q ss_pred HHcCCC-------CCcEEEEEecCCCceEEEEecCC----ChHHHHHHHHHHHh
Q 020843 233 TYYKLD-------SIPVVLVVDPITGQKMRSWCGMV----QPESLLEDLVPFMD 275 (320)
Q Consensus 233 ~~Y~v~-------~~P~i~Iidp~tG~~v~~~~G~~----~~~~fl~~L~~fld 275 (320)
+.|++. .+|+++|||| .|..+..+.|.. +.++++..|.....
T Consensus 110 ~~ygv~~~~~g~~~~p~~fIID~-dG~I~~~~~~~~~~gr~~~Ellr~I~alq~ 162 (249)
T 3a2v_A 110 RRLGLLHAESATHTVRGVFIVDA-RGVIRTMLYYPMELGRLVDEILRIVKALKL 162 (249)
T ss_dssp HHHTCCCTTCSSSCCEEEEEECT-TSBEEEEEEECTTBCCCHHHHHHHHHHHHH
T ss_pred HHhCCccccCCCcccceEEEECC-CCeEEEEEecCCcccchhHHHHHHHHHHHh
Confidence 788876 8999999998 598887776653 68888888877653
No 207
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=97.61 E-value=0.00046 Score=64.80 Aligned_cols=121 Identities=12% Similarity=0.141 Sum_probs=86.8
Q ss_pred hhHHhhhhhcCCCccccccccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChH
Q 020843 148 SSRDNLASLYRPPFHLMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSE 227 (320)
Q Consensus 148 s~~~~l~~lf~Ppf~~~~~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~e 227 (320)
.-.+.+...-.|.+..+...++.... ....+.++|+|+++||.+|+.+...+ ..+.+-++..+.|..+|.+..+
T Consensus 106 ~i~~fi~~~~~p~v~~~~~~~~~~~~---~~~~~~~~v~F~~~~~~~~~~~~~~~---~~~A~~~~~~i~f~~vd~~~~~ 179 (361)
T 3uem_A 106 NLLDFIKHNQLPLVIEFTEQTAPKIF---GGEIKTHILLFLPKSVSDYDGKLSNF---KTAAESFKGKILFIFIDSDHTD 179 (361)
T ss_dssp HHHHHHHHHSSCSEEECSTTTHHHHH---SCSCCEEEEEECCSSSSSHHHHHHHH---HHHHGGGTTTCEEEEECTTSGG
T ss_pred HHHHHHHHcCCCcceecCcccHHHHh---cCCCCcEEEEEEeCCchhHHHHHHHH---HHHHHHccCceEEEEecCChHH
Confidence 34456666667777766666776443 34456778999999999999885221 2344444557888999988777
Q ss_pred HHHHHHHcCCCC--CcEEEEEecCCCceEEEEe---cCCChHHHHHHHHHHHhc
Q 020843 228 GKKVCTYYKLDS--IPVVLVVDPITGQKMRSWC---GMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 228 g~~~~~~Y~v~~--~P~i~Iidp~tG~~v~~~~---G~~~~~~fl~~L~~fld~ 276 (320)
..++++.|++.. +|+++|++. |..+..+. |..+++.+.+-+..+++.
T Consensus 180 ~~~~~~~fgi~~~~~P~~~~~~~--~~~~~ky~~~~~~~~~~~l~~fi~~~l~g 231 (361)
T 3uem_A 180 NQRILEFFGLKKEECPAVRLITL--EEEMTKYKPESEELTAERITEFCHRFLEG 231 (361)
T ss_dssp GHHHHHHTTCCTTTCSEEEEEEC--C--CCEECCSSCCCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCccCCccEEEEEc--CCcccccCCCccccCHHHHHHHHHHHhcC
Confidence 788999999987 999999996 23333443 678999998888888874
No 208
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=97.60 E-value=0.00019 Score=55.01 Aligned_cols=76 Identities=16% Similarity=0.122 Sum_probs=52.1
Q ss_pred EEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCCceEEEEecCCCh
Q 020843 184 LVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQP 263 (320)
Q Consensus 184 LV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~ 263 (320)
++.|+.+||.+|+.+.+ +.+-+...+ +..+|++... .++..|++. +|+|++ ..|+.+. |..++
T Consensus 3 vv~f~a~~C~~C~~~~~-------~L~~~~~~~-~~~vdid~~~--~l~~~~g~~-vPtl~~---~~G~~v~---g~~~~ 65 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVE-------ALAQARAGA-FFSVFIDDDA--ALESAYGLR-VPVLRD---PMGRELD---WPFDA 65 (87)
T ss_dssp EEEEECSSCHHHHHHHH-------HHHHTTCCC-EEEEECTTCH--HHHHHHTTT-CSEEEC---TTCCEEE---SCCCH
T ss_pred EEEEECCCCchHHHHHH-------HHHHHHHhh-eEEEECCCCH--HHHHHhCCC-cCeEEE---ECCEEEe---CCCCH
Confidence 67899999999988842 222233332 4677877532 477789987 999987 3587763 77888
Q ss_pred HHHHHHHHHHHhc
Q 020843 264 ESLLEDLVPFMDG 276 (320)
Q Consensus 264 ~~fl~~L~~fld~ 276 (320)
+.+.+.|...++.
T Consensus 66 ~~L~~~l~~~~~~ 78 (87)
T 1ttz_A 66 PRLRAWLDAAPHA 78 (87)
T ss_dssp HHHHHHHHTCC--
T ss_pred HHHHHHHHHHHHH
Confidence 8877777666554
No 209
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=97.55 E-value=0.00066 Score=56.90 Aligned_cols=88 Identities=11% Similarity=0.077 Sum_probs=56.3
Q ss_pred cCCeEEEEEe-CCCCcchhhhhhccCCCHHHHHHHh--cceEEEEeecCChH-HHHHH-------------------HHc
Q 020843 179 QDKWLLVNLQ-STKEFSSHMLNRDTWANEAVSQTIS--TNFIFWQVYDDTSE-GKKVC-------------------TYY 235 (320)
Q Consensus 179 ~~K~LLV~l~-~~~~f~c~~lnRdvw~n~~V~~~l~--~nFV~~q~d~~s~e-g~~~~-------------------~~Y 235 (320)
.+||++|+|+ ..||+.|...- +.+.++.+ .++.++.+..++++ ..+++ +.|
T Consensus 46 ~gk~vvl~f~~~~~C~~C~~~~------~~l~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~ 119 (171)
T 2yzh_A 46 KDVVQVIITVPSLDTPVCETET------KKFNEIMAGMEGVDVTVVSMDLPFAQKRFCESFNIQNVTVASDFRYRDMEKY 119 (171)
T ss_dssp CSSEEEEEECSCTTSHHHHHHH------HHHHHHTTTCTTEEEEEEESSCHHHHHHHHHHTTCCSSEEEECTTTCGGGGG
T ss_pred CCCeEEEEEECCCCCCchHHHH------HHHHHHHHHcCCceEEEEeCCCHHHHHHHHHHcCCCCeEEeecCccCcHHHh
Confidence 4799999998 79999997643 23333322 24555555554433 22333 344
Q ss_pred CCC---------CCcEEEEEecCCCceEEEEec-----CCChHHHHHHHHHH
Q 020843 236 KLD---------SIPVVLVVDPITGQKMRSWCG-----MVQPESLLEDLVPF 273 (320)
Q Consensus 236 ~v~---------~~P~i~Iidp~tG~~v~~~~G-----~~~~~~fl~~L~~f 273 (320)
++. ..|+++|||+ .|+.+..+.| ..+++++++.|++.
T Consensus 120 gv~~~~~~~~g~~~p~~~liD~-~G~i~~~~~~~~~~~~~~~~~ll~~l~~l 170 (171)
T 2yzh_A 120 GVLIGEGALKGILARAVFIIDK-EGKVAYVQLVPEITEEPNYDEVVNKVKEL 170 (171)
T ss_dssp TCBBCSSTTTTSBCCEEEEECT-TSBEEEEEECSBTTSCCCCHHHHHHHHHC
T ss_pred CCEecccccCCceeeEEEEEcC-CCeEEEEEeCCCcCCCCCHHHHHHHHHhh
Confidence 432 1599999997 5988887754 34678888888764
No 210
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=97.54 E-value=0.00038 Score=58.09 Aligned_cols=91 Identities=11% Similarity=0.121 Sum_probs=56.3
Q ss_pred hcCCeEEEEEe-CCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHH-HHHHH------------------HcCC
Q 020843 178 VQDKWLLVNLQ-STKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEG-KKVCT------------------YYKL 237 (320)
Q Consensus 178 ~~~K~LLV~l~-~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg-~~~~~------------------~Y~v 237 (320)
-++|+++|+|+ ..||+.|..--..+ .+...++-..+++++.++.++++. .++++ .|++
T Consensus 28 ~~Gk~vvl~f~~~~~c~~C~~e~~~l--~~~~~~~~~~~~~~v~vs~d~~~~~~~~~~~~~~~~p~l~D~~~~v~~~ygv 105 (157)
T 4g2e_A 28 LKGKVVVLAFYPAAFTQVCTKEMCTF--RDSMAKFNQVNAVVLGISVDPPFSNKAFKEHNKLNFTILSDYNREVVKKYNV 105 (157)
T ss_dssp GTTSCEEEEECSCTTCCC------CC--SCGGGGGGGCSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTC
T ss_pred HCCCeEEEEecCCCCCCccccchhhc--ccccccccccCceEeeecccchhHHHHHHHHcCCcEEEEEcCCcHHHHHcCC
Confidence 35899999998 89999997643332 223334445678888888887653 34444 4443
Q ss_pred C-----------CCcEEEEEecCCCceEEEEecC-----CChHHHHHHHH
Q 020843 238 D-----------SIPVVLVVDPITGQKMRSWCGM-----VQPESLLEDLV 271 (320)
Q Consensus 238 ~-----------~~P~i~Iidp~tG~~v~~~~G~-----~~~~~fl~~L~ 271 (320)
. ..|+++|||+ .|..+..+.|. .+.+++++.|+
T Consensus 106 ~~~~~~~~~~~~~~p~tflID~-~G~I~~~~~~~~~~~~~~~~eil~~l~ 154 (157)
T 4g2e_A 106 AWEFPALPGYVLAKRAVFVIDK-EGKVRYKWVSDDPTKEPPYDEIEKVVK 154 (157)
T ss_dssp EEECTTSTTCEEECEEEEEECT-TSBEEEEEEESSTTCCCCHHHHHHHHH
T ss_pred ccccccCCCcceeeeeEEEECC-CCEEEEEEECCCCCCCCCHHHHHHHHH
Confidence 1 3578899998 59887766442 45677766664
No 211
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=97.54 E-value=0.00096 Score=56.52 Aligned_cols=94 Identities=13% Similarity=0.208 Sum_probs=59.5
Q ss_pred hcCCeEEEEEeCCCCc-chhhhhhccCCCHHHHHHHh---cceEEEEeec----CChH-HHHHHHHcC------------
Q 020843 178 VQDKWLLVNLQSTKEF-SSHMLNRDTWANEAVSQTIS---TNFIFWQVYD----DTSE-GKKVCTYYK------------ 236 (320)
Q Consensus 178 ~~~K~LLV~l~~~~~f-~c~~lnRdvw~n~~V~~~l~---~nFV~~q~d~----~s~e-g~~~~~~Y~------------ 236 (320)
=+|||+||+|..+||. .|...-..+ ..+.+.++ .++.++.+.+ |+++ -.+|++.|+
T Consensus 30 ~~Gk~vll~F~~t~Cp~~Cp~~~~~l---~~l~~~~~~~~~~v~~v~isvDp~~Dtp~~l~~y~~~~~~~~~~~~~ltg~ 106 (170)
T 4hde_A 30 LKGKVWVADFMFTNCQTVCPPMTANM---AKLQKMAKEEKLDVQFVSFSVDPDLDKPENLKAFIQKFTEDTSNWNLLTGY 106 (170)
T ss_dssp HTTSCEEEEEECTTCSSSHHHHHHHH---HHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTTCSCCTTEEEEBCS
T ss_pred hCCCEEEEEEECCCCCCcccHHHHHH---HHHHHhhhcccccceeEeeecCcccccHHHHHHHHHHcCCCCCCceecCcc
Confidence 3699999999999996 586544332 33444443 2355555543 3333 233433332
Q ss_pred ------------------------CCCCcEEEEEecCCCceEEEEecC--CChHHHHHHHHHHHh
Q 020843 237 ------------------------LDSIPVVLVVDPITGQKMRSWCGM--VQPESLLEDLVPFMD 275 (320)
Q Consensus 237 ------------------------v~~~P~i~Iidp~tG~~v~~~~G~--~~~~~fl~~L~~fld 275 (320)
+...|+++|||| .|+.+..+.|. .+.+++++.|+..++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~-~G~i~~~~~g~~~~~~~~l~~~ik~Lle 170 (170)
T 4hde_A 107 SLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQ-NGKVMKKYSGISNTPYEDIIRDMKRLAE 170 (170)
T ss_dssp CHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECT-TSCEEEEEESSSSCCHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcC-CCeEEEEECCCCCCCHHHHHHHHHHHhC
Confidence 223478999998 59998888875 467888888877653
No 212
>1z96_A DNA-damage, UBA-domain protein MUD1; ubiquitin, three-helix bundle, protein transport; 1.80A {Schizosaccharomyces pombe} SCOP: a.5.2.1
Probab=97.53 E-value=0.00012 Score=47.74 Aligned_cols=37 Identities=24% Similarity=0.294 Sum_probs=34.1
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHh
Q 020843 10 KQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFY 48 (320)
Q Consensus 10 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff 48 (320)
.++.|.+++++ |-+.+.|++.|..++||++.|++.+|
T Consensus 4 ~~~~i~~L~~m--Gf~~~~a~~AL~~~~~n~e~A~~~L~ 40 (40)
T 1z96_A 4 LNSKIAQLVSM--GFDPLEAAQALDAANGDLDVAASFLL 40 (40)
T ss_dssp HHHHHHHHHHT--TCCHHHHHHHHHHTTTCHHHHHHHHC
T ss_pred HHHHHHHHHHc--CCCHHHHHHHHHHcCCCHHHHHHHHC
Confidence 57899999999 89999999999999999999998764
No 213
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=97.52 E-value=0.00058 Score=60.75 Aligned_cols=94 Identities=10% Similarity=0.098 Sum_probs=62.0
Q ss_pred cCCeEEEEEe-CCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChH-HH-------------------------HH
Q 020843 179 QDKWLLVNLQ-STKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSE-GK-------------------------KV 231 (320)
Q Consensus 179 ~~K~LLV~l~-~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~e-g~-------------------------~~ 231 (320)
.+||+||+|+ ..||+.|...-..+ ++...++-..++.++.+..++++ .. .+
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l--~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~ 132 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEF--NKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDI 132 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHH--HHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHH--HHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHH
Confidence 6899999999 99999997653221 01111222245667777666543 22 23
Q ss_pred HHHcCC-----CCCcEEEEEecCCCceEEEEecC----CChHHHHHHHHHHHh
Q 020843 232 CTYYKL-----DSIPVVLVVDPITGQKMRSWCGM----VQPESLLEDLVPFMD 275 (320)
Q Consensus 232 ~~~Y~v-----~~~P~i~Iidp~tG~~v~~~~G~----~~~~~fl~~L~~fld 275 (320)
++.|++ ..+|+++|||+ .|+.+..+.|. .+++++++.|.....
T Consensus 133 ~~~ygv~~~~g~~~P~~~lID~-~G~I~~~~~g~~~~~~~~~ell~~l~~L~~ 184 (221)
T 2c0d_A 133 SKNYNVLYDNSFALRGLFIIDK-NGCVRHQTVNDLPIGRNVQEVLRTIDSIIH 184 (221)
T ss_dssp HHHTTCEETTTEECEEEEEECT-TSBEEEEEEECTTCCCCHHHHHHHHHHHHH
T ss_pred HHHcCCcccCCCccceEEEECC-CCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 444555 25799999997 59988887663 467888888887653
No 214
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=97.51 E-value=0.00059 Score=57.55 Aligned_cols=95 Identities=12% Similarity=0.082 Sum_probs=63.7
Q ss_pred hcCCeEEEEEe-CCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChH-HHHHHH------------------HcCC
Q 020843 178 VQDKWLLVNLQ-STKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSE-GKKVCT------------------YYKL 237 (320)
Q Consensus 178 ~~~K~LLV~l~-~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~e-g~~~~~------------------~Y~v 237 (320)
.++||++|+|+ ..||+.|..--..+ ++...++-+.++.++.++.++++ ..++++ .|++
T Consensus 31 ~~Gk~vvl~f~~~~~cp~C~~e~~~l--~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv 108 (164)
T 4gqc_A 31 KRGRPAVLIFFPAAFSPVCTKELCTF--RDKMAQLEKANAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREVIKLYNV 108 (164)
T ss_dssp HTSSCEEEEECSCTTCCEECSSCEES--CCCGGGGGGSSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTC
T ss_pred cCCCEEEEEEeCCCCCCCcccchhhh--hhhHHHhhccCceEEEecCCCHHHHHHHHHhcCcccceeecCchHHHHHcCC
Confidence 46899999998 89999997543322 12223344457888888877655 234444 4444
Q ss_pred C----------CCcEEEEEecCCCceEEEEec-----CCChHHHHHHHHHHHh
Q 020843 238 D----------SIPVVLVVDPITGQKMRSWCG-----MVQPESLLEDLVPFMD 275 (320)
Q Consensus 238 ~----------~~P~i~Iidp~tG~~v~~~~G-----~~~~~~fl~~L~~fld 275 (320)
. ..|+.+|||+ .|.....+.+ ..+.+++++.|++...
T Consensus 109 ~~~~~~~~~~~~~p~tflID~-~G~I~~~~~~~~~~~~~~~~eil~~l~~l~~ 160 (164)
T 4gqc_A 109 YHEDLKGLKMVAKRAVFIVKP-DGTVAYKWVTDNPLNEPDYDEVVREANKIAG 160 (164)
T ss_dssp EEEEETTEEEEECCEEEEECT-TSBEEEEEECSCTTCCCCHHHHHHHHHHHHH
T ss_pred cccccccCcCCeeeEEEEECC-CCEEEEEEEeCCCCCCCCHHHHHHHHHHHhc
Confidence 1 3688899998 5988777644 2468899999887654
No 215
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=97.47 E-value=3.5e-05 Score=72.14 Aligned_cols=89 Identities=11% Similarity=0.040 Sum_probs=58.1
Q ss_pred ccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCC--hHHHHHHHHcCCCCCcEEE
Q 020843 167 GSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDT--SEGKKVCTYYKLDSIPVVL 244 (320)
Q Consensus 167 gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s--~eg~~~~~~Y~v~~~P~i~ 244 (320)
+..+.++.+..++.+ +|+|+++||+.|+.+.. .+.++ .+.+-.+.++..+ .+..+++++|++.++|++.
T Consensus 186 ~~~~~~la~~l~~~~--vV~F~A~WC~~Ck~l~p------~le~l-A~~l~~Vd~d~~d~~~~~~~la~~~gI~~vPT~~ 256 (291)
T 3kp9_A 186 SPLAVGLAAHLRQIG--GTMYGAYWCPHCQDQKE------LFGAA-FDQVPYVECSPNGPGTPQAQECTEAGITSYPTWI 256 (291)
T ss_dssp CSTHHHHHHHHHHTT--CEEEECTTCHHHHHHHH------HHGGG-GGGSCEEESCSSCSSSCCCHHHHTTTCCSTTEEE
T ss_pred CHHHHHHHHHhCCCC--EEEEECCCCHHHHHHHH------HHHHH-HHHcCEEEEeecCchhhHHHHHHHcCCcccCeEE
Confidence 445555555544444 68999999999999953 22222 2234445555322 2356789999999999965
Q ss_pred EEecCCCceEEEEecCCChHHHHHHHH
Q 020843 245 VVDPITGQKMRSWCGMVQPESLLEDLV 271 (320)
Q Consensus 245 Iidp~tG~~v~~~~G~~~~~~fl~~L~ 271 (320)
+ +|+. +.|..+.+++.+.+.
T Consensus 257 i----~G~~---~~G~~~~~~L~~~l~ 276 (291)
T 3kp9_A 257 I----NGRT---YTGVRSLEALAVASG 276 (291)
T ss_dssp E----TTEE---EESCCCHHHHHHHTC
T ss_pred E----CCEE---ecCCCCHHHHHHHHC
Confidence 5 4763 789888876665543
No 216
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=97.47 E-value=0.00063 Score=59.84 Aligned_cols=90 Identities=13% Similarity=0.069 Sum_probs=61.6
Q ss_pred cCCeEEEEEe-CCCCcchhhhhhccCCCHHHHHHH----hcceEEEEeecCChH-HH-----------------------
Q 020843 179 QDKWLLVNLQ-STKEFSSHMLNRDTWANEAVSQTI----STNFIFWQVYDDTSE-GK----------------------- 229 (320)
Q Consensus 179 ~~K~LLV~l~-~~~~f~c~~lnRdvw~n~~V~~~l----~~nFV~~q~d~~s~e-g~----------------------- 229 (320)
.+||++|+|+ ..||+.|..-- +.+.++. ..++.++.+..++++ ..
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~------~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~ 120 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEI------IAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDL 120 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHH------HHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECT
T ss_pred CCCeEEEEEECCCCCCCCHHHH------HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECC
Confidence 5899999999 99999997543 2232222 246777777666543 22
Q ss_pred --HHHHHcCCC------CCcEEEEEecCCCceEEEEecC----CChHHHHHHHHHHHh
Q 020843 230 --KVCTYYKLD------SIPVVLVVDPITGQKMRSWCGM----VQPESLLEDLVPFMD 275 (320)
Q Consensus 230 --~~~~~Y~v~------~~P~i~Iidp~tG~~v~~~~G~----~~~~~fl~~L~~fld 275 (320)
.+++.|++. .+|+++|||+ .|+.+..+.|. .+++++++.|.....
T Consensus 121 ~~~~~~~ygv~~~~~g~~~p~~~lID~-~G~I~~~~~g~~~~~~~~~ell~~l~~l~~ 177 (211)
T 2pn8_A 121 THQISKDYGVYLEDSGHTLRGLFIIDD-KGILRQITLNDLPVGRSVDETLRLVQAFQY 177 (211)
T ss_dssp TSHHHHHTTCEETTTTEECEEEEEECT-TSBEEEEEEECTTBCCCHHHHHHHHHHHHH
T ss_pred chHHHHHcCCcccCCCcccceEEEECC-CCEEEEEEecCCCCCCCHHHHHHHHHHhhh
Confidence 234445552 4899999997 59988877664 357888888877653
No 217
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=97.47 E-value=0.00028 Score=62.26 Aligned_cols=86 Identities=13% Similarity=0.145 Sum_probs=61.3
Q ss_pred hcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc--ceEEEEeecC-------------------------------
Q 020843 178 VQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST--NFIFWQVYDD------------------------------- 224 (320)
Q Consensus 178 ~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~--nFV~~q~d~~------------------------------- 224 (320)
..+|.+++.|.++||+.|+.+... +.++.+. .+++..+...
T Consensus 84 ~~~k~~vv~F~d~~Cp~C~~~~~~------l~~l~~~~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~ 157 (216)
T 1eej_A 84 PQEKHVITVFTDITCGYCHKLHEQ------MADYNALGITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKS 157 (216)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHTT------HHHHHHTTEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCC
T ss_pred CCCCEEEEEEECCCCHHHHHHHHH------HHHHHhCCcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCC
Confidence 467999999999999999999654 5555543 3443333211
Q ss_pred ---------ChHHHHHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHh
Q 020843 225 ---------TSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 225 ---------s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld 275 (320)
-.+..++++.|++.++|+++|.+ |+ .+.|+.++++|.+.|...+.
T Consensus 158 ~~~~~~~~~v~~~~~l~~~~gV~gtPt~v~~d---G~---~~~G~~~~~~l~~~l~~~~~ 211 (216)
T 1eej_A 158 VAPASCDVDIADHYALGVQLGVSGTPAVVLSN---GT---LVPGYQPPKEMKEFLDEHQK 211 (216)
T ss_dssp CCCCCCSCCHHHHHHHHHHHTCCSSSEEECTT---SC---EEESCCCHHHHHHHHHHHHH
T ss_pred CChhHHHHHHHHHHHHHHHcCCCccCEEEEcC---Ce---EecCCCCHHHHHHHHHHhhh
Confidence 12346788899999999995534 53 46799999998888877654
No 218
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=97.45 E-value=0.00031 Score=63.27 Aligned_cols=94 Identities=6% Similarity=-0.025 Sum_probs=63.3
Q ss_pred HhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcc---eEEEEeecC-----------------------------
Q 020843 177 SVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTN---FIFWQVYDD----------------------------- 224 (320)
Q Consensus 177 k~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~n---FV~~q~d~~----------------------------- 224 (320)
....|..++.|.+.+|+.|..|.. .+.+++++. |++..+...
T Consensus 94 ~~~ak~~v~~F~D~~Cp~C~~~~~------~l~~~~~~g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~ 167 (241)
T 1v58_A 94 KKDAPVIVYVFADPFCPYCKQFWQ------QARPWVDSGKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGG 167 (241)
T ss_dssp CTTCSEEEEEEECTTCHHHHHHHH------HHHHHHHTTSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTT
T ss_pred CCCCCeEEEEEECCCChhHHHHHH------HHHHHHhCCcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhc
Confidence 346788999999999999999964 456666642 333322110
Q ss_pred ----------C-------hHHHHHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhcCC
Q 020843 225 ----------T-------SEGKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDGGP 278 (320)
Q Consensus 225 ----------s-------~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~~~ 278 (320)
+ .+..++++.|++.++|+++|.+. +|+. ..+.|+.++++|.+.|.+.+.++-
T Consensus 168 ~~~l~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~-~G~~-~~~~G~~~~~~L~~~l~~~~~~~~ 236 (241)
T 1v58_A 168 KLKLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSK-ENTL-QQAVGLPDQKTLNIIMGNKLQHHH 236 (241)
T ss_dssp CCCCCCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEET-TTEE-EEEESSCCHHHHHHHTTC------
T ss_pred cCCCCccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECC-CCCE-EEecCCCCHHHHHHHHHHHHHhhc
Confidence 0 12355677899999999999885 5753 567899999998888887776543
No 219
>1wj7_A Hypothetical protein (RSGI RUH-015); UBA domain, ubiquitin associated domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.5.2.1
Probab=97.43 E-value=0.00015 Score=57.50 Aligned_cols=41 Identities=22% Similarity=0.397 Sum_probs=38.6
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCC
Q 020843 10 KQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGN 51 (320)
Q Consensus 10 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~ 51 (320)
.++.|..++++ ||.+++.|+..|..|||||+.||...|+..
T Consensus 39 ~eekVk~L~Em-tG~seeeAr~AL~~~ngDl~~AI~~Lleg~ 79 (104)
T 1wj7_A 39 FEEKVKQLIDI-TGKNQDECVIALHDCNGDVNRAINVLLEGN 79 (104)
T ss_dssp HHHHHHHHHHH-TCCCHHHHHHHHHHHTSCHHHHHHHHHTCS
T ss_pred HHHHHHHHHHh-hCCCHHHHHHHHHHcCCCHHHHHHHHHhCC
Confidence 47899999999 999999999999999999999999999865
No 220
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=97.39 E-value=0.00084 Score=55.50 Aligned_cols=93 Identities=4% Similarity=0.046 Sum_probs=58.5
Q ss_pred cCCeEEEEEe-CCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChH-------------------HHHHHHHcCCC
Q 020843 179 QDKWLLVNLQ-STKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSE-------------------GKKVCTYYKLD 238 (320)
Q Consensus 179 ~~K~LLV~l~-~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~e-------------------g~~~~~~Y~v~ 238 (320)
++||++|+|+ ..||+.|...-..+ ++...++-..+ .++.+..++++ ..++.+.|++.
T Consensus 34 k~~~vvl~f~~~~~c~~C~~~~~~l--~~~~~~~~~~~-~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~ 110 (159)
T 2a4v_A 34 NNRVVVFFVYPRASTPGSTRQASGF--RDNYQELKEYA-AVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAK 110 (159)
T ss_dssp HCSEEEEEECSSSSSHHHHHHHHHH--HHHHHHHTTTC-EEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHTCB
T ss_pred CCCeEEEEEcCCCCCCCHHHHHHHH--HHHHHHHHhCC-cEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhCCc
Confidence 3569999997 89999997643221 01111122233 55555555432 12455677777
Q ss_pred CCc------EEEEEecCCCceEEEEecCCC---hHHHHHHHHHHHhc
Q 020843 239 SIP------VVLVVDPITGQKMRSWCGMVQ---PESLLEDLVPFMDG 276 (320)
Q Consensus 239 ~~P------~i~Iidp~tG~~v~~~~G~~~---~~~fl~~L~~fld~ 276 (320)
..| +.+|| + .|..+..+.|... .+.+++.|.+.++.
T Consensus 111 ~~p~~g~~~~~~li-~-~G~i~~~~~g~~~~~~~~~~~~~l~~~l~~ 155 (159)
T 2a4v_A 111 KTPLSGSIRSHFIF-V-DGKLKFKRVKISPEVSVNDAKKEVLEVAEK 155 (159)
T ss_dssp SSSSSCBCCEEEEE-E-TTEEEEEEESCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCccceEEEE-c-CCEEEEEEccCCccccHHHHHHHHHHHHHH
Confidence 777 77778 6 6998888888643 46778888887764
No 221
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=97.38 E-value=0.0012 Score=59.53 Aligned_cols=114 Identities=14% Similarity=0.124 Sum_probs=72.0
Q ss_pred cCCeEEEEEeC-CCCcchhhhhhccCCCHHHHHHH----hcceEEEEeecCChHH-H-----------------------
Q 020843 179 QDKWLLVNLQS-TKEFSSHMLNRDTWANEAVSQTI----STNFIFWQVYDDTSEG-K----------------------- 229 (320)
Q Consensus 179 ~~K~LLV~l~~-~~~f~c~~lnRdvw~n~~V~~~l----~~nFV~~q~d~~s~eg-~----------------------- 229 (320)
.+||++|+|+. .||+.|..-- +.+.++. ..++.++.+..++.+. .
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el------~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~ 149 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEI------IAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDL 149 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHH------HHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECT
T ss_pred CCCEEEEEEECCCCCCchHHHH------HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCc
Confidence 58999999998 9999997643 3333333 2467788887776542 2
Q ss_pred --HHHHHcCCC------CCcEEEEEecCCCceEEEEecC----CChHHHHHHHHHHH--hcCCCcccccCCCCCCCCCCC
Q 020843 230 --KVCTYYKLD------SIPVVLVVDPITGQKMRSWCGM----VQPESLLEDLVPFM--DGGPREQHAKVSHKRPRGSST 295 (320)
Q Consensus 230 --~~~~~Y~v~------~~P~i~Iidp~tG~~v~~~~G~----~~~~~fl~~L~~fl--d~~~~d~~~~~~~~~~~~~~~ 295 (320)
.+++.|++. .+|+++|||+ .|..+..+.+. ...+++++.|...- +.. ...++-+-+|-...+
T Consensus 150 ~~~v~~~ygv~~~~~g~~~p~~flID~-~G~I~~~~~~~~~~~~~~~eil~~l~~lq~~~~~---~~~cp~~W~~g~~~~ 225 (240)
T 3qpm_A 150 THQISKDYGVYLEDQGHTLRGLFIIDE-KGVLRQITMNDLPVGRSVDETLRLVQAFQYTDKH---GEVCPAGWKPGSDTI 225 (240)
T ss_dssp TSHHHHHTTCEETTTTEECEEEEEECT-TSBEEEEEEECTTBCCCHHHHHHHHHHHHHHHHH---SCBBCTTCCTTSCCB
T ss_pred hHHHHHHhCCccccCCCccceEEEEcC-CCeEEEEEecCCCCCCCHHHHHHHHHHhhhhhhc---CCccCCCCCCCCcee
Confidence 344455554 5899999998 59888776653 34567777666542 221 223344555555555
Q ss_pred CCCCccc
Q 020843 296 TPQQKNK 302 (320)
Q Consensus 296 ~~~~~~~ 302 (320)
.+.+..+
T Consensus 226 ~~~~~~~ 232 (240)
T 3qpm_A 226 IPDPSGK 232 (240)
T ss_dssp CSSTTTT
T ss_pred cCCHHHH
Confidence 5555554
No 222
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=97.37 E-value=0.00076 Score=57.42 Aligned_cols=92 Identities=16% Similarity=0.277 Sum_probs=58.9
Q ss_pred cCCeEEEEEe-CCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChH-HHHHHH------------------HcCCC
Q 020843 179 QDKWLLVNLQ-STKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSE-GKKVCT------------------YYKLD 238 (320)
Q Consensus 179 ~~K~LLV~l~-~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~e-g~~~~~------------------~Y~v~ 238 (320)
.+||++|+|+ ..||..|..--..+ .+...++-..++.++.+..++++ ..++++ .|++.
T Consensus 50 ~Gk~vvl~f~~~~~c~~C~~el~~l--~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~ 127 (179)
T 3ixr_A 50 TNQWLVLYFYPKDNTPGSSTEGLEF--NLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKAFDVI 127 (179)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHH--HHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHHHHTTCE
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHH--HHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHHHHcCCc
Confidence 5889999998 88999997653222 11222222346888888877654 334444 44442
Q ss_pred ------------CCcEEEEEecCCCceEEEEecCC---ChHHHHHHHHHH
Q 020843 239 ------------SIPVVLVVDPITGQKMRSWCGMV---QPESLLEDLVPF 273 (320)
Q Consensus 239 ------------~~P~i~Iidp~tG~~v~~~~G~~---~~~~fl~~L~~f 273 (320)
..|+++|||+ .|+.+..+.+.. .++++++.|+..
T Consensus 128 ~~~~~~g~~~~~~~p~~~lID~-~G~I~~~~~~~~~~~~~~~il~~l~~l 176 (179)
T 3ixr_A 128 KEKTMYGRQVIGIERSTFLIGP-THRIVEAWRQVKVPGHAEEVLNKLKAH 176 (179)
T ss_dssp EEECCC--CEEEECCEEEEECT-TSBEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred ccccccCcccCCcceEEEEECC-CCEEEEEEcCCCCCCCHHHHHHHHHHH
Confidence 1599999998 599888875532 346666666554
No 223
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=97.29 E-value=0.0014 Score=55.08 Aligned_cols=85 Identities=8% Similarity=0.046 Sum_probs=63.4
Q ss_pred hcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc----ceEEEEeecCC----------------------------
Q 020843 178 VQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST----NFIFWQVYDDT---------------------------- 225 (320)
Q Consensus 178 ~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~----nFV~~q~d~~s---------------------------- 225 (320)
...|..+|.|.+.||+.|..+. +.+.+++++ .|++..+.+..
T Consensus 20 ~~a~v~i~~f~d~~Cp~C~~~~------~~l~~l~~~~~~v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~ 93 (175)
T 3gyk_A 20 PEGDVTVVEFFDYNCPYCRRAM------AEVQGLVDADPNVRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMG 93 (175)
T ss_dssp TTCSEEEEEEECTTCHHHHHHH------HHHHHHHHHCTTEEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHT
T ss_pred CCCCEEEEEEECCCCccHHHHH------HHHHHHHHhCCCEEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHh
Confidence 4689999999999999999996 456666653 46665554321
Q ss_pred -------------------------------------hHHHHHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHH
Q 020843 226 -------------------------------------SEGKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLE 268 (320)
Q Consensus 226 -------------------------------------~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~ 268 (320)
....++++.|++.++|+++| .|+ .+.|..+.+.|.+
T Consensus 94 ~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~i----~g~---~~~G~~~~~~l~~ 166 (175)
T 3gyk_A 94 MSGKANETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVV----EDA---LVPGFVEQSQLQD 166 (175)
T ss_dssp CSSCCSHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEEEE----TTE---EECSCCCHHHHHH
T ss_pred cCCCCCHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccCCEEEE----CCE---EeeCCCCHHHHHH
Confidence 12345667889999999986 353 4679999999999
Q ss_pred HHHHHHh
Q 020843 269 DLVPFMD 275 (320)
Q Consensus 269 ~L~~fld 275 (320)
.|.+.++
T Consensus 167 ~i~~~l~ 173 (175)
T 3gyk_A 167 AVDRARK 173 (175)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9988775
No 224
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=97.20 E-value=0.0016 Score=54.41 Aligned_cols=87 Identities=14% Similarity=0.047 Sum_probs=54.9
Q ss_pred cCCeEEEEEe-CCCCcchhhhhhccCCCHHHHHHHh-cceEEEEeecCChH-HH--------------------HHHHHc
Q 020843 179 QDKWLLVNLQ-STKEFSSHMLNRDTWANEAVSQTIS-TNFIFWQVYDDTSE-GK--------------------KVCTYY 235 (320)
Q Consensus 179 ~~K~LLV~l~-~~~~f~c~~lnRdvw~n~~V~~~l~-~nFV~~q~d~~s~e-g~--------------------~~~~~Y 235 (320)
++|+++|+|+ +.||..|..-- +.+.++.+ .++.++.+..++++ .. .+++.|
T Consensus 45 ~Gk~vvl~f~~~~~c~~C~~~~------~~l~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~ 118 (166)
T 3p7x_A 45 AGKKKLISVVPSIDTGVCDQQT------RKFNSDASKEEGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENY 118 (166)
T ss_dssp TTSCEEEEECSCTTSHHHHHHH------HHHHHHSCTTTSEEEEEESSCHHHHHHHHHHHTCSSCEEEECTTTCHHHHHH
T ss_pred CCCcEEEEEECCCCCCccHHHH------HHHHHHhhcCCCEEEEEECCCHHHHHHHHHHcCCCceEEccCCchhHHHHHh
Confidence 5899999998 78999996532 33333333 34555555555433 22 344455
Q ss_pred CCCC------CcEEEEEecCCCceEEEEec-----CCChHHHHHHHHH
Q 020843 236 KLDS------IPVVLVVDPITGQKMRSWCG-----MVQPESLLEDLVP 272 (320)
Q Consensus 236 ~v~~------~P~i~Iidp~tG~~v~~~~G-----~~~~~~fl~~L~~ 272 (320)
++.. .|+++|||+ .|+.+..+.+ ..+.+++++.|++
T Consensus 119 gv~~~~~g~~~p~~~liD~-~G~i~~~~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 119 GVVMEELRLLARAVFVLDA-DNKVVYKEIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp TCEETTTTEECCEEEEECT-TCBEEEEEECSBTTSCCCHHHHHHHHHT
T ss_pred CCccccCCceeeEEEEECC-CCeEEEEEEcCCcccCCCHHHHHHHHhc
Confidence 5532 799999997 5988877543 2356777777653
No 225
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=97.19 E-value=0.0018 Score=53.78 Aligned_cols=87 Identities=13% Similarity=0.016 Sum_probs=53.7
Q ss_pred cCCeEEEEEe-CCCCcchhhhhhccCCCHHHHHHHh--cceEEEEeecCChH---------------------HHHHHHH
Q 020843 179 QDKWLLVNLQ-STKEFSSHMLNRDTWANEAVSQTIS--TNFIFWQVYDDTSE---------------------GKKVCTY 234 (320)
Q Consensus 179 ~~K~LLV~l~-~~~~f~c~~lnRdvw~n~~V~~~l~--~nFV~~q~d~~s~e---------------------g~~~~~~ 234 (320)
++||++|+|+ +.||..|..-- +.+.++.+ .++.++.++.++++ ...+++.
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~------~~l~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~ 114 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQT------RRFNEELAGLDNTVVLTVSMDLPFAQKRWCGAEGLDNAIMLSDYFDHSFGRD 114 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHH------HHHHHHTTTCTTEEEEEEESSCHHHHHHHHHHHTCTTSEEEECTTTCHHHHH
T ss_pred CCCEEEEEEECCCCCCccHHHH------HHHHHHHHHcCCcEEEEEECCCHHHHHHHHHhcCCCCcEEecCCchhHHHHH
Confidence 5799999999 58999997542 22222222 23444444443322 1234455
Q ss_pred cCCC----C--CcEEEEEecCCCceEEEEecC-----CChHHHHHHHHH
Q 020843 235 YKLD----S--IPVVLVVDPITGQKMRSWCGM-----VQPESLLEDLVP 272 (320)
Q Consensus 235 Y~v~----~--~P~i~Iidp~tG~~v~~~~G~-----~~~~~fl~~L~~ 272 (320)
|++. . .|+++|||+ .|+.+..+.|. .+.+++++.|++
T Consensus 115 ~gv~~~~~g~~~p~~~liD~-~G~i~~~~~g~~~~~~~~~~~~l~~l~~ 162 (163)
T 1psq_A 115 YALLINEWHLLARAVFVLDT-DNTIRYVEYVDNINSEPNFEAAIAAAKA 162 (163)
T ss_dssp HTCBCTTTCSBCCEEEEECT-TCBEEEEEECSBTTSCCCHHHHHHHHHH
T ss_pred hCCccccCCceEEEEEEEcC-CCeEEEEEecCCcCCCCCHHHHHHHHHh
Confidence 5553 2 399999997 59988887663 234788877764
No 226
>4gew_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; 2.35A {Caenorhabditis elegans} PDB: 4f1i_A
Probab=97.16 E-value=0.00019 Score=68.49 Aligned_cols=42 Identities=24% Similarity=0.468 Sum_probs=38.8
Q ss_pred chHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCC
Q 020843 9 DKQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGN 51 (320)
Q Consensus 9 ~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~ 51 (320)
..++++.+|.+| |++|+..|+.||+..+||||.||+.||+..
T Consensus 44 ~~~~~~~~f~~~-~~~~~~~~~~~l~~~~w~~~~~~~~~~~~~ 85 (362)
T 4gew_A 44 SDEQKLHEFAII-TATDEAFAQSILQDVDWDLKKALDVFYGSE 85 (362)
T ss_dssp CHHHHHHHHHHH-HTCCHHHHHHHTTSSSSCHHHHHHHHHHCG
T ss_pred chHHHHHHHHHH-hCCcHHHHHHHHhhcCchHHHHHHHHcCCc
Confidence 357899999999 999999999999999999999999999653
No 227
>1oai_A Nuclear RNA export factor; nuclear transport, nuclear transport factor; 1.0A {Homo sapiens} SCOP: a.5.2.3
Probab=97.13 E-value=0.00053 Score=49.06 Aligned_cols=41 Identities=24% Similarity=0.396 Sum_probs=38.5
Q ss_pred cchHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhc
Q 020843 8 NDKQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYV 49 (320)
Q Consensus 8 ~~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~ 49 (320)
..+.+.|..|... ||-..+-+..+|+.++||++.|+..|-+
T Consensus 5 ~~q~~mv~~~s~~-Tgmn~~~s~~cL~~~~Wd~~~A~~~F~~ 45 (59)
T 1oai_A 5 PEQQEMLQAFSTQ-SGMNLEWSQKCLQDNNWDYTRSAQAFTH 45 (59)
T ss_dssp HHHHHHHHHHHHH-HCCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HCCCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 3588999999999 9999999999999999999999999976
No 228
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=97.09 E-value=0.00072 Score=61.62 Aligned_cols=118 Identities=13% Similarity=0.092 Sum_probs=60.2
Q ss_pred cCCeEEEEEe-CCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHH-H-------------------------HH
Q 020843 179 QDKWLLVNLQ-STKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEG-K-------------------------KV 231 (320)
Q Consensus 179 ~~K~LLV~l~-~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg-~-------------------------~~ 231 (320)
.+||++|+|+ ..||+.|..--..+ .+...+|=..++.++.+..++.+. . .+
T Consensus 90 kGK~vvL~F~~a~~cp~C~~el~~l--~~l~~~~~~~gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~v 167 (254)
T 3tjj_A 90 RGKYLVFFFYPLDFTFVCPTEIIAF--GDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQI 167 (254)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHH--HHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHH--HHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHH
Confidence 5899999999 88999997643211 111222223467777777776542 2 34
Q ss_pred HHHcCCC------CCcEEEEEecCCCceEEEEecC----CChHHHHHHHHHHH--hcCCCcccccCCCCCCCCCCCCCCC
Q 020843 232 CTYYKLD------SIPVVLVVDPITGQKMRSWCGM----VQPESLLEDLVPFM--DGGPREQHAKVSHKRPRGSSTTPQQ 299 (320)
Q Consensus 232 ~~~Y~v~------~~P~i~Iidp~tG~~v~~~~G~----~~~~~fl~~L~~fl--d~~~~d~~~~~~~~~~~~~~~~~~~ 299 (320)
++.|++. .+|+++|||+ .|..+..+.+. ...++++..|...- +++ ...++-+-+|-..-+.+.+
T Consensus 168 a~~ygv~~~~~g~~~p~tflID~-~G~I~~~~~~~~~~~~~~~eil~~L~alq~~~~~---~~~cp~~W~~g~~~~~~~~ 243 (254)
T 3tjj_A 168 SKDYGVYLEDSGHTLRGLFIIDD-KGILRQITLNDLPVGRSVDETLRLVQAFQYTDKH---GEVAPAGWKPGSETIIPDP 243 (254)
T ss_dssp HHHHTCEETTTTEECEEEEEECT-TSBEEEEEEECTTCCCCHHHHHHHHHHHHHHHHH---C------------------
T ss_pred HHHcCCccccCCCccceEEEECC-CCeEEEEEecCCCCCCCHHHHHHHHHhhcccccc---CccccCCCCCCCceeccCh
Confidence 4455553 4799999998 59888776653 34677776665442 221 2233444445444455544
Q ss_pred ccc
Q 020843 300 KNK 302 (320)
Q Consensus 300 ~~~ 302 (320)
..+
T Consensus 244 ~~~ 246 (254)
T 3tjj_A 244 AGK 246 (254)
T ss_dssp ---
T ss_pred hHH
Confidence 444
No 229
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=97.00 E-value=0.002 Score=56.66 Aligned_cols=83 Identities=13% Similarity=0.243 Sum_probs=58.6
Q ss_pred hcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc--ceEEEEeecC---C---------------------------
Q 020843 178 VQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST--NFIFWQVYDD---T--------------------------- 225 (320)
Q Consensus 178 ~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~--nFV~~q~d~~---s--------------------------- 225 (320)
..+|..++.|.+.||+.|+.|... +.++.+. .+++..+.+. +
T Consensus 84 ~~~k~~vv~F~d~~Cp~C~~~~~~------l~~~~~~~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~ 157 (211)
T 1t3b_A 84 KNEKHVVTVFMDITCHYCHLLHQQ------LKEYNDLGITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNL 157 (211)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHTT------HHHHHHTTEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCC
T ss_pred CCCCEEEEEEECCCCHhHHHHHHH------HHHHHhCCcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCC
Confidence 467999999999999999999754 5555442 3433333321 0
Q ss_pred ----------hHHHHHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHH
Q 020843 226 ----------SEGKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVP 272 (320)
Q Consensus 226 ----------~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~ 272 (320)
.+..++++.|++.++|+++|. +|+ .+.|+.++++|.+.|.+
T Consensus 158 ~~~~~~~~~v~~~~~l~~~~gV~gTPt~vi~---nG~---~~~G~~~~~~l~~~l~~ 208 (211)
T 1t3b_A 158 PKEVKTPNIVKKHYELGIQFGVRGTPSIVTS---TGE---LIGGYLKPADLLRALEE 208 (211)
T ss_dssp CSSCCCSSHHHHHHHHHHHHTCCSSCEEECT---TSC---CCCSCCCHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHcCCCcCCEEEEe---CCE---EecCCCCHHHHHHHHHh
Confidence 134567889999999999983 475 46799999888777654
No 230
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=96.99 E-value=0.016 Score=51.03 Aligned_cols=119 Identities=10% Similarity=0.062 Sum_probs=79.3
Q ss_pred HHhhhhhcCCCccccccccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHH
Q 020843 150 RDNLASLYRPPFHLMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGK 229 (320)
Q Consensus 150 ~~~l~~lf~Ppf~~~~~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~ 229 (320)
.+.+..--.|.+.. -+.+.+...-....+++++.|.+.+|..|..+-. .| ..|.+-.+.++.|.-+|.+..+..
T Consensus 104 ~~fi~~~~~plv~e---~t~~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~-~~--~~vAk~~k~~i~F~~vd~~~~~~~ 177 (227)
T 4f9z_D 104 SRFIEINSLHMVTE---YNPVTVIGLFNSVIQIHLLLIMNKASPEYEENMH-RY--QKAAKLFQGKILFILVDSGMKENG 177 (227)
T ss_dssp HHHHHHHCCCSEEE---CCHHHHHHHHHSSCCEEEEEEECTTSTTHHHHHH-HH--HHHHHHTTTTCEEEEEETTSGGGH
T ss_pred HHHHHHhCCCceee---cCcccHHHHhccCCceEEEEEEcCCcchHHHHHH-HH--HHHHHHhhCCEEEEEeCCccHhHH
Confidence 34444444455444 4555555554455567777777888888877642 22 345556667788888888866656
Q ss_pred HHHHHcCCC--CCcEEEEEecCCCceEEEE-ecCCChHHHHHHHHHHHh
Q 020843 230 KVCTYYKLD--SIPVVLVVDPITGQKMRSW-CGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 230 ~~~~~Y~v~--~~P~i~Iidp~tG~~v~~~-~G~~~~~~fl~~L~~fld 275 (320)
++++.|++. .+|+|+|++..++ ..... .|.++++.+.+-+..+++
T Consensus 178 ~~l~~fgl~~~~~P~~~i~~~~~~-~ky~~~~~~~t~~~i~~Fv~~~~~ 225 (227)
T 4f9z_D 178 KVISFFKLKESQLPALAIYQTLDD-EWDTLPTAEVSVEHVQNFCDGFLS 225 (227)
T ss_dssp HHHHHTTCCGGGCSEEEEEESSSC-CEEEETTCCCCHHHHHHHHHHHHT
T ss_pred HHHHHcCCCcccCCEEEEEECCCC-ccccCCcCCCCHHHHHHHHHHHhC
Confidence 688999997 8999999997543 22233 366888888887777765
No 231
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=96.95 E-value=0.0027 Score=52.90 Aligned_cols=84 Identities=17% Similarity=0.081 Sum_probs=53.0
Q ss_pred cCCeEEEEEe-CCCCcchhhhhhccCCCHHHHHHHh--cceEEEEeecCChH---------------------HHHHHHH
Q 020843 179 QDKWLLVNLQ-STKEFSSHMLNRDTWANEAVSQTIS--TNFIFWQVYDDTSE---------------------GKKVCTY 234 (320)
Q Consensus 179 ~~K~LLV~l~-~~~~f~c~~lnRdvw~n~~V~~~l~--~nFV~~q~d~~s~e---------------------g~~~~~~ 234 (320)
.+||++|+|+ +.||..|..-- +.+.++.+ .++.++.++.++++ ...+++.
T Consensus 42 ~gk~vvl~f~~~~~c~~C~~e~------~~l~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~ 115 (165)
T 1q98_A 42 ASKRKVLNIFPSIDTGVCATSV------RKFNQQAAKLSNTIVLCISADLPFAQARFCGAEGIENAKTVSTFRNHALHSQ 115 (165)
T ss_dssp TTSEEEEEECSCSCSSCCCHHH------HHHHHHHHHSTTEEEEEEESSCHHHHTTCTTTTTCTTEEEEECTTCTHHHHH
T ss_pred CCCeEEEEEECCCCCCccHHHH------HHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHcCCCceEEeeccccchHHHH
Confidence 5799999998 78999996532 23333332 35566665554322 2345556
Q ss_pred cCCCC---------CcEEEEEecCCCceEEEEecC-----CChHHHHHH
Q 020843 235 YKLDS---------IPVVLVVDPITGQKMRSWCGM-----VQPESLLED 269 (320)
Q Consensus 235 Y~v~~---------~P~i~Iidp~tG~~v~~~~G~-----~~~~~fl~~ 269 (320)
|++.. .|+.+|||+ .|+.+..+.|. .+.+++++.
T Consensus 116 ~gv~~~~~~~~g~~~p~~~liD~-~G~i~~~~~~~~~~~~~~~~~~l~~ 163 (165)
T 1q98_A 116 LGVDIQTGPLAGLTSRAVIVLDE-QNNVLHSQLVEEIKEEPNYEAALAV 163 (165)
T ss_dssp TTCEECSSTTTTSBCCEEEEECT-TSBEEEEEECSBTTSCCCHHHHHHT
T ss_pred hCceecccccCCccceeEEEEcC-CCEEEEEEeCCCCCCCCCHHHHHHh
Confidence 66532 499999997 59888887652 244555544
No 232
>2g3q_A Protein YBL047C; endocytosis, solution structure, UBA domain, endocytosis/signaling protein complex; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1
Probab=96.95 E-value=0.0014 Score=43.49 Aligned_cols=39 Identities=26% Similarity=0.394 Sum_probs=35.8
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcC
Q 020843 10 KQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVG 50 (320)
Q Consensus 10 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~ 50 (320)
.++.|.+.+++ |-+.+.|++-|..++||++.|++-.|++
T Consensus 4 ~e~~i~~L~~M--GF~~~~a~~AL~~~~~n~e~A~~~L~~~ 42 (43)
T 2g3q_A 4 KSLAVEELSGM--GFTEEEAHNALEKCNWDLEAATNFLLDS 42 (43)
T ss_dssp HHHHHHHHHTT--TSCHHHHHHHHHHHTSCHHHHHHHHHTC
T ss_pred CHHHHHHHHHc--CCCHHHHHHHHHHhCcCHHHHHHHHHcC
Confidence 57899999999 8999999999999999999999988763
No 233
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=96.94 E-value=0.0069 Score=52.61 Aligned_cols=86 Identities=15% Similarity=0.066 Sum_probs=57.3
Q ss_pred hcCCeEEEEEe-CCCCcchhhhhhccCCCHHHHHHHh--cceEEEEeecCChHH---------------------HHHHH
Q 020843 178 VQDKWLLVNLQ-STKEFSSHMLNRDTWANEAVSQTIS--TNFIFWQVYDDTSEG---------------------KKVCT 233 (320)
Q Consensus 178 ~~~K~LLV~l~-~~~~f~c~~lnRdvw~n~~V~~~l~--~nFV~~q~d~~s~eg---------------------~~~~~ 233 (320)
-.+|+++|+|+ +.||..|..-- +.+.++.+ .++.++.+..++++. ..+++
T Consensus 76 ~~Gk~vvl~F~~~~~c~~C~~e~------~~l~~l~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ 149 (200)
T 3zrd_A 76 FAGKRKVLNIFPSIDTGVCAASV------RKFNQLAGELENTVVLCISSDLPFAQSRFCGAEGLSNVITLSTLRGADFKQ 149 (200)
T ss_dssp GTTSEEEEEECSCCCCSCCCHHH------HHHHHHHHTSTTEEEEEEESSCHHHHTTCTTTTTCTTEEEEETTSCTHHHH
T ss_pred hCCCcEEEEEECCCCCchhHHHH------HHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHcCCCCceEEecCchHHHHH
Confidence 35899999999 67999997643 34444444 367777777665432 24455
Q ss_pred HcCCC---------CCcEEEEEecCCCceEEEEecC-----CChHHHHHHH
Q 020843 234 YYKLD---------SIPVVLVVDPITGQKMRSWCGM-----VQPESLLEDL 270 (320)
Q Consensus 234 ~Y~v~---------~~P~i~Iidp~tG~~v~~~~G~-----~~~~~fl~~L 270 (320)
.|++. ..|+++|||+ .|+.+..+.+. .+.+++++.|
T Consensus 150 ~ygv~~~~~~~~g~~~p~~~lID~-~G~I~~~~~~~~~~~~~~~~~~l~~L 199 (200)
T 3zrd_A 150 AYGVAITEGPLAGLTARAVVVLDG-QDNVIYSELVNEITTEPNYDAALAAL 199 (200)
T ss_dssp HTTCEECSSTTTTSBCCEEEEECT-TSBEEEEEECSBTTSCCCHHHHHHHH
T ss_pred HhCceeecccCCCccccEEEEECC-CCeEEEEEecCCcccCCCHHHHHHhh
Confidence 56553 2599999997 59888776442 3566666655
No 234
>1dv0_A DNA repair protein HHR23A; helical bundle, DNA binding protein; HET: DNA; NMR {Homo sapiens} SCOP: a.5.2.1 PDB: 1f4i_A
Probab=96.92 E-value=0.00079 Score=45.89 Aligned_cols=42 Identities=12% Similarity=0.106 Sum_probs=38.5
Q ss_pred chHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCCC
Q 020843 9 DKQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNE 52 (320)
Q Consensus 9 ~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 52 (320)
+.+++|.+.+++ |-+...|++.|.+|+||++.|++..|+...
T Consensus 3 ~e~eaI~rL~~m--GF~~~~a~~Al~a~~~n~e~A~~~Lf~~~~ 44 (47)
T 1dv0_A 3 QEKEAIERLKAL--GFPESLVIQAYFACEKNENLAANFLLSQNF 44 (47)
T ss_dssp CCHHHHTTTTTT--TCCHHHHHHHHTTTTSCHHHHHHHTTSCCC
T ss_pred chHHHHHHHHHc--CCCHHHHHHHHHHcCCCHHHHHHHHHhCcC
Confidence 467899999999 999999999999999999999999998653
No 235
>1vg5_A RSGI RUH-014, rhomboid family protein; UBA domain, cDNA, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: a.5.2.1
Probab=96.87 E-value=0.0019 Score=48.18 Aligned_cols=42 Identities=12% Similarity=0.182 Sum_probs=38.1
Q ss_pred chHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCCC
Q 020843 9 DKQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNE 52 (320)
Q Consensus 9 ~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 52 (320)
+.+++|.+++++ |-+.+.|+.-|.+++||++.|++..|...+
T Consensus 28 ~~ee~I~~L~eM--GF~r~~a~~AL~~~~~nve~Ave~Ll~~~~ 69 (73)
T 1vg5_A 28 ASEEQIQKLVAM--GFDRTQVEVALAAADDDLTVAVEILMSQSG 69 (73)
T ss_dssp CCHHHHHHHHTT--TCCHHHHHHHHHHHTSCHHHHHHHHHTCSC
T ss_pred ccHHHHHHHHHc--CCCHHHHHHHHHHhCCCHHHHHHHHHHCCC
Confidence 357899999999 899999999999999999999999998543
No 236
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=96.87 E-value=0.0032 Score=56.63 Aligned_cols=118 Identities=16% Similarity=0.175 Sum_probs=58.8
Q ss_pred cCCeEEEEEeCCC-Ccchh-----h----hhhccCCCHHHHHHHhcceEEEEeecCChH---------------------
Q 020843 179 QDKWLLVNLQSTK-EFSSH-----M----LNRDTWANEAVSQTISTNFIFWQVYDDTSE--------------------- 227 (320)
Q Consensus 179 ~~K~LLV~l~~~~-~f~c~-----~----lnRdvw~n~~V~~~l~~nFV~~q~d~~s~e--------------------- 227 (320)
.+||++|+|+..| |+.|. . |++. | .++.++.++.++++
T Consensus 47 ~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~-~----------~gv~VvgIS~Ds~~~~~~f~~~~gl~~fplLsD~~ 115 (224)
T 3keb_A 47 SHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS-W----------PHLKLIVITVDSPSSLARARHEHGLPNIALLSTLR 115 (224)
T ss_dssp TTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT-C----------TTSEEEEEESSCHHHHHHHHHHHCCTTCEEEESTT
T ss_pred CCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH-c----------CCCEEEEEECCCHHHHHHHHHHcCCCCceEEEcCC
Confidence 5799999999877 99998 2 2222 1 34555555555432
Q ss_pred HHHHHHHcCCCC---------CcEEEEEecCCCceEEEEe-----cCCChHHHHHHHHHHHhcCCC-cccccCCCCCCCC
Q 020843 228 GKKVCTYYKLDS---------IPVVLVVDPITGQKMRSWC-----GMVQPESLLEDLVPFMDGGPR-EQHAKVSHKRPRG 292 (320)
Q Consensus 228 g~~~~~~Y~v~~---------~P~i~Iidp~tG~~v~~~~-----G~~~~~~fl~~L~~fld~~~~-d~~~~~~~~~~~~ 292 (320)
...+++.|++.. .|+.+|||+ .|..+..+. +..+.+++++.|........- +..+ -..|.
T Consensus 116 ~~~vak~yGv~~~~~~~~G~~~p~tfvID~-dG~I~~~~~~~~~~~~pd~~evl~~L~~l~~~~~~~~~~~----~~~~~ 190 (224)
T 3keb_A 116 GRDFHKRYGVLITEYPLSGYTSPAIILADA-ANVVHYSERLANTRDFFDFDAIEKLLQEGEQQAMAAEREA----AEARQ 190 (224)
T ss_dssp CTTHHHHTTCBCCSTTSTTCBCCEEEEECT-TCBEEEEEECSBTTCCCCHHHHHHHHHHHHHHC----------------
T ss_pred chHHHHHhCCccccccccCCccCEEEEEcC-CCEEEEEEecCCCCCCCCHHHHHHHHHHhhhcccccChhh----hhhhh
Confidence 134556676632 799999998 598876653 236789999999887665332 1111 11111
Q ss_pred CCCCCCCccchhhhhhhhhHHH
Q 020843 293 SSTTPQQKNKGKLQLLSSAMLL 314 (320)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~ 314 (320)
+.- ....+|..+||+.|-|+
T Consensus 191 ~~~--~~~~~~~~~~~~~~~~~ 210 (224)
T 3keb_A 191 EQD--AEREKGTERLLEKAKLI 210 (224)
T ss_dssp ----------------------
T ss_pred hhh--hhhhhhHHHHHHHHHHH
Confidence 111 12346778888888765
No 237
>2jp7_A MRNA export factor MEX67; solution MEX67, UBA, translation; NMR {Saccharomyces cerevisiae} PDB: 2khh_A
Probab=96.82 E-value=0.0009 Score=47.55 Aligned_cols=41 Identities=15% Similarity=0.227 Sum_probs=38.6
Q ss_pred chHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcC
Q 020843 9 DKQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVG 50 (320)
Q Consensus 9 ~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~ 50 (320)
.+.++|.+|... ||-..+-+..+|+.++||++.|+..|-+.
T Consensus 5 ~q~~mv~~~s~~-T~Mn~e~S~~cL~~n~Wd~~~A~~~F~~~ 45 (57)
T 2jp7_A 5 VQLELLNKLHLE-TKLNAEYTFMLAEQSNWNYEVAIKGFQSS 45 (57)
T ss_dssp HHHHHHHHHHHH-HCSCHHHHHHHHHHTTTCSHHHHHHHHHS
T ss_pred HHHHHHHHHHHH-HCCCHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 478899999999 99999999999999999999999999875
No 238
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.80 E-value=0.0066 Score=60.38 Aligned_cols=82 Identities=10% Similarity=0.102 Sum_probs=60.8
Q ss_pred hcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHH--hcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCCceEE
Q 020843 178 VQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTI--STNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMR 255 (320)
Q Consensus 178 ~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l--~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~ 255 (320)
..++..++.|+++||.+|+.+.. .+.++- +.+..+..+|.+ +...++..|++.+.|+++| +|+.+.
T Consensus 115 ~~~~~~i~~f~a~~C~~C~~~~~------~l~~~a~~~~~v~~~~vd~~--~~~~~~~~~~i~svPt~~i----~g~~~~ 182 (521)
T 1hyu_A 115 IDGDFEFETYYSLSCHNCPDVVQ------ALNLMAVLNPRIKHTAIDGG--TFQNEITERNVMGVPAVFV----NGKEFG 182 (521)
T ss_dssp CCSCEEEEEEECTTCSSHHHHHH------HHHHHHHHCTTEEEEEEETT--TCHHHHHHTTCCSSSEEEE----TTEEEE
T ss_pred cCCCcceEEEECCCCcCcHHHHH------HHHHHHhHcCceEEEEEech--hhHHHHHHhCCCccCEEEE----CCEEEe
Confidence 35677789999999999999853 333322 236777788876 3456889999999999977 587764
Q ss_pred EEecCCChHHHHHHHHHH
Q 020843 256 SWCGMVQPESLLEDLVPF 273 (320)
Q Consensus 256 ~~~G~~~~~~fl~~L~~f 273 (320)
. |..+.+++++.|...
T Consensus 183 ~--G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 183 Q--GRMTLTEIVAKVDTG 198 (521)
T ss_dssp E--SCCCHHHHHHHHCCS
T ss_pred c--CCCCHHHHHHHHhhc
Confidence 4 888888888776543
No 239
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=96.79 E-value=0.0062 Score=54.63 Aligned_cols=86 Identities=13% Similarity=0.143 Sum_probs=60.7
Q ss_pred HhcCCeEEEEEeCCC--CcchhhhhhccCCCHHHHHHHhc--c------eEEEEeecCChHHHHHHHHcCCCCCcEEEEE
Q 020843 177 SVQDKWLLVNLQSTK--EFSSHMLNRDTWANEAVSQTIST--N------FIFWQVYDDTSEGKKVCTYYKLDSIPVVLVV 246 (320)
Q Consensus 177 k~~~K~LLV~l~~~~--~f~c~~lnRdvw~n~~V~~~l~~--n------FV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Ii 246 (320)
++-.++|+|.++.+| |..|+.+. +.+.++-+. . ..|..+|.+. ...+++.|++..+|+++|+
T Consensus 22 ~~~~~pv~v~~~~~~~~c~~c~~~~------~~l~ela~~~~~~~~~~~v~~~~vd~d~--~~~~~~~~gv~~~Pt~~i~ 93 (243)
T 2hls_A 22 AEMVNPVEVHVFLSKSGCETCEDTL------RLMKLFEEESPTRNGGKLLKLNVYYRES--DSDKFSEFKVERVPTVAFL 93 (243)
T ss_dssp TTCCSCEEEEEEECSSSCTTHHHHH------HHHHHHHHHSCEETTEESEEEEEEETTT--THHHHHHTTCCSSSEEEET
T ss_pred HhCCCCEEEEEEeCCCCCCchHHHH------HHHHHHHHhccCCCCCceeEEEEecCCc--CHHHHHhcCCCcCCEEEEE
Confidence 355689999999999 99999883 334444332 2 4566667654 3568999999999999998
Q ss_pred ecCCCceEEEEecCCChHHHHHHHHHHHh
Q 020843 247 DPITGQKMRSWCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 247 dp~tG~~v~~~~G~~~~~~fl~~L~~fld 275 (320)
+ | ..++.|..+.+++-..+..+++
T Consensus 94 ~---g--~~~~~G~~~~~~l~~fv~~~l~ 117 (243)
T 2hls_A 94 G---G--EVRWTGIPAGEEIRALVEVIMR 117 (243)
T ss_dssp T---T--TEEEESCCCTTHHHHHHHHHHH
T ss_pred C---C--ceeEcCCCcHHHHHHHHHHHHh
Confidence 2 5 5567787666666666666654
No 240
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=96.73 E-value=0.012 Score=55.36 Aligned_cols=124 Identities=11% Similarity=0.181 Sum_probs=73.2
Q ss_pred hcCCeEEEEEe-CCCCcchhhhhhccCCCHHHHHHHh---cceEEEEeecCChHH-------------------HHHHHH
Q 020843 178 VQDKWLLVNLQ-STKEFSSHMLNRDTWANEAVSQTIS---TNFIFWQVYDDTSEG-------------------KKVCTY 234 (320)
Q Consensus 178 ~~~K~LLV~l~-~~~~f~c~~lnRdvw~n~~V~~~l~---~nFV~~q~d~~s~eg-------------------~~~~~~ 234 (320)
=.|||++|+|+ ..+|+.|.. ++.++-+ +++.++.++.++++. .++++.
T Consensus 22 ~~Gk~vvl~F~p~~~tp~C~~---------e~~~~~~~~~~~~~v~gis~D~~~~~~~f~~~~~l~fp~l~D~~~~v~~~ 92 (322)
T 4eo3_A 22 LYGKYTILFFFPKAGTSGSTR---------EAVEFSRENFEKAQVVGISRDSVEALKRFKEKNDLKVTLLSDPEGILHEF 92 (322)
T ss_dssp TTTSEEEEEECSSTTSHHHHH---------HHHHHHHSCCTTEEEEEEESCCHHHHHHHHHHHTCCSEEEECTTCHHHHH
T ss_pred hCCCeEEEEEECCCCCCCCHH---------HHHHHHHHhhCCCEEEEEeCCCHHHHHHHHHhhCCceEEEEcCchHHHHh
Confidence 35899999999 346777743 1222222 356777777776442 234456
Q ss_pred cCC----CCCcEEEEEecCCCceEEEEecCC---ChHHHHHHHHHHHh-cCCCcccccCCCCCCCCCCCCCCCccchhhh
Q 020843 235 YKL----DSIPVVLVVDPITGQKMRSWCGMV---QPESLLEDLVPFMD-GGPREQHAKVSHKRPRGSSTTPQQKNKGKLQ 306 (320)
Q Consensus 235 Y~v----~~~P~i~Iidp~tG~~v~~~~G~~---~~~~fl~~L~~fld-~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (320)
|++ ..+|+.+|||+ .|...+.|.+.. .++++|+.|+.+.+ ..++.. .+.++|.-|.=++..-......+
T Consensus 93 ygv~~~~~~~r~tfiId~-~G~i~~~~~~v~~~~h~~~~l~~~~~~~~~~~~~~~--~I~~RRSiR~F~~~~V~~e~l~~ 169 (322)
T 4eo3_A 93 FNVLENGKTVRSTFLIDR-WGFVRKEWRRVKVEGHVQEVKEALDRLIEEDLSLNK--HIEWRRARRALKKDRVPREELEL 169 (322)
T ss_dssp TTCEETTEECCEEEEECT-TSBEEEEEESCCSTTHHHHHHHHHHHHHHHHTSCCH--HHHHCCCCCCBCCCCCCHHHHHH
T ss_pred cCCCCCCcCccEEEEECC-CCEEEEEEeCCCccccHHHHHHHHhhhchhhhHHHH--HHHhhhccCCcCccccCHHHHHH
Confidence 666 34789999998 598888887632 36888888888864 233322 12233322222222222233566
Q ss_pred hhhhhHH
Q 020843 307 LLSSAML 313 (320)
Q Consensus 307 ~~~~~~~ 313 (320)
+|++|++
T Consensus 170 ileaA~~ 176 (322)
T 4eo3_A 170 LIKAAHL 176 (322)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 7777653
No 241
>1ify_A HHR23A, UV excision repair protein RAD23 homolog A; ubiquitin associated domain, UBA domain, ubiquitin proteosome pathway, DNA binding protein; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=96.71 E-value=0.0018 Score=44.48 Aligned_cols=40 Identities=20% Similarity=0.382 Sum_probs=36.7
Q ss_pred chHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcC
Q 020843 9 DKQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVG 50 (320)
Q Consensus 9 ~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~ 50 (320)
..+++|.+.+++ |-+.+.|+.-|.+++||++.|++..|+.
T Consensus 7 ~~~~~i~~L~~M--GF~~~~a~~AL~~~~~n~e~A~e~L~~g 46 (49)
T 1ify_A 7 EYETMLTEIMSM--GYERERVVAALRASYNNPHRAVEYLLTG 46 (49)
T ss_dssp HHHHHHHHHHHT--TCCHHHHHHHHHTTTSCSHHHHHHHHHC
T ss_pred cCHHHHHHHHHc--CCCHHHHHHHHHHhCCCHHHHHHHHHhC
Confidence 457899999999 8899999999999999999999998874
No 242
>2knz_A Ubiquilin-4; cytoplasm, endoplasmic reticulum, nucleus, phosphoprotein, protein binding; NMR {Mus musculus}
Probab=96.71 E-value=0.0027 Score=44.26 Aligned_cols=41 Identities=20% Similarity=0.105 Sum_probs=36.2
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCC
Q 020843 10 KQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGN 51 (320)
Q Consensus 10 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~ 51 (320)
-+++|.+.+++ +-.+.+.|++.|.+++||++.||+..|+..
T Consensus 11 ~~~~l~~L~~M-GF~~~~~~~~AL~~t~gnve~Ave~L~~~~ 51 (53)
T 2knz_A 11 FQQQLEQLNSM-GFINREANLQALIATGGDINAAIERLLGSQ 51 (53)
T ss_dssp HHHHHHHHHTT-TCCCHHHHHHHHHHHTSCHHHHHHHHHHCC
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHHHhCCCHHHHHHHHHHcC
Confidence 35689999999 555999999999999999999999998754
No 243
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=96.71 E-value=0.0033 Score=50.06 Aligned_cols=76 Identities=13% Similarity=0.126 Sum_probs=53.3
Q ss_pred eEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc-ceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCCceEEEEecC
Q 020843 182 WLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST-NFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGM 260 (320)
Q Consensus 182 ~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~-nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~ 260 (320)
..++.|+.+||..|+.+. +.+.++..+ .+-+..+|++... .++..|++. +|+|+++. .|+.+ ..|.
T Consensus 30 ~~vv~y~~~~C~~C~~a~------~~L~~l~~e~~i~~~~vDId~d~--~l~~~ygv~-VP~l~~~~--dG~~v--~~g~ 96 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMI------ASLRVLQKKSWFELEVINIDGNE--HLTRLYNDR-VPVLFAVN--EDKEL--CHYF 96 (107)
T ss_dssp CCEEEEECSSCHHHHHHH------HHHHHHHHHSCCCCEEEETTTCH--HHHHHSTTS-CSEEEETT--TTEEE--ECSS
T ss_pred cEEEEEeCCCChhHHHHH------HHHHHHHHhcCCeEEEEECCCCH--HHHHHhCCC-CceEEEEE--CCEEE--EecC
Confidence 458889999999998884 333444333 4677788887533 367789986 99997664 47766 3477
Q ss_pred CChHHHHHHH
Q 020843 261 VQPESLLEDL 270 (320)
Q Consensus 261 ~~~~~fl~~L 270 (320)
.+++++.+.|
T Consensus 97 ~~~~~L~~~L 106 (107)
T 2fgx_A 97 LDSDVIGAYL 106 (107)
T ss_dssp CCCHHHHHHH
T ss_pred CCHHHHHHHh
Confidence 8888776654
No 244
>2dah_A Ubiquilin-3; UBA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=96.70 E-value=0.0021 Score=45.10 Aligned_cols=42 Identities=19% Similarity=0.103 Sum_probs=36.9
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCCC
Q 020843 10 KQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNE 52 (320)
Q Consensus 10 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 52 (320)
-+++|.+++++ +=.+.+.+++.|.+++||++.||+..|..++
T Consensus 9 ~~~~l~~L~~M-GF~d~~~n~~AL~~~~Gdv~~Ave~L~~~~~ 50 (54)
T 2dah_A 9 FQVQLEQLRSM-GFLNREANLQALIATGGDVDAAVEKLRQSSG 50 (54)
T ss_dssp SHHHHHHHHHH-TCCCHHHHHHHHHHHTSCHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHc-CCCcHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 47899999999 6567778899999999999999999998654
No 245
>1wji_A Tudor domain containing protein 3; UBA domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=96.67 E-value=0.0043 Score=44.86 Aligned_cols=41 Identities=20% Similarity=0.331 Sum_probs=37.8
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCCC
Q 020843 10 KQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNE 52 (320)
Q Consensus 10 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 52 (320)
.+++|.+.+++ |-+.+.|++-|.+++||++.|++..|+...
T Consensus 9 ~~~~I~~L~~M--GF~~~~a~~AL~~~~~nve~A~e~L~~~~~ 49 (63)
T 1wji_A 9 DEKALKHITEM--GFSKEASRQALMDNGNNLEAALNVLLTSNK 49 (63)
T ss_dssp CHHHHHHHHTT--TCCHHHHHHHHHHTTSCHHHHHHHHHHHSS
T ss_pred CHHHHHHHHHc--CCCHHHHHHHHHHhCCCHHHHHHHHHHCCC
Confidence 57899999999 899999999999999999999999998654
No 246
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=96.67 E-value=0.0074 Score=50.22 Aligned_cols=77 Identities=10% Similarity=-0.074 Sum_probs=44.6
Q ss_pred cCCeEEEEEe-CCCCcchh--hhhhccCCCHHHHHHHhcceE-EEEeecCChH-H--------------------HHHHH
Q 020843 179 QDKWLLVNLQ-STKEFSSH--MLNRDTWANEAVSQTISTNFI-FWQVYDDTSE-G--------------------KKVCT 233 (320)
Q Consensus 179 ~~K~LLV~l~-~~~~f~c~--~lnRdvw~n~~V~~~l~~nFV-~~q~d~~s~e-g--------------------~~~~~ 233 (320)
++||++|+|+ ..||+.|. .+. .+ ++...++=+.++. ++.++.++++ . .++++
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~-~l--~~~~~~~~~~~v~~vv~Is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 110 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVP-GF--IEKAGELKSKGVTEILCISVNDPFVMKAWAKSYPENKHVKFLADGSATYTH 110 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHH-HH--HHHHHHHHHTTCCCEEEEESSCHHHHHHHHHTCTTCSSEEEEECTTSHHHH
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHH-HH--HHHHHHHHHCCCCEEEEEECCCHHHHHHHHHhcCCCCCeEEEECCCchHHH
Confidence 5899999999 89999998 231 10 0111111123444 5555544432 1 23444
Q ss_pred HcCCC-----------CCcEEEEEecCCCceEEEEecC
Q 020843 234 YYKLD-----------SIPVVLVVDPITGQKMRSWCGM 260 (320)
Q Consensus 234 ~Y~v~-----------~~P~i~Iidp~tG~~v~~~~G~ 260 (320)
.|++. ..|+.+||| .|+.+..+.|.
T Consensus 111 ~~gv~~~~~~~g~~~~~~p~~~vid--~G~i~~~~~~~ 146 (162)
T 1tp9_A 111 ALGLELDLQEKGLGTRSRRFALLVD--DLKVKAANIEG 146 (162)
T ss_dssp HTTCEEEETTTTSEEEECCEEEEEE--TTEEEEEEECS
T ss_pred HcCcccccccCCCCccceeEEEEEE--CCEEEEEEeeC
Confidence 55553 278888888 58877766554
No 247
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=96.58 E-value=0.0024 Score=46.86 Aligned_cols=60 Identities=12% Similarity=0.098 Sum_probs=41.2
Q ss_pred EEEEeCCCCcchhhhhhccCCCHHHHHHHhc---ceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCCceE
Q 020843 184 LVNLQSTKEFSSHMLNRDTWANEAVSQTIST---NFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKM 254 (320)
Q Consensus 184 LV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~---nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v 254 (320)
++.|+.+||+.|+.+. +.+.+++++ .|.++.++.+ .+...+++.|++.++|+++| .|+.+
T Consensus 4 ~~~f~~~~C~~C~~~~------~~l~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~gv~~vPt~~i----~g~~~ 66 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAE------QAVANAIDPSKYTVEIVHLGTD-KARIAEAEKAGVKSVPALVI----DGAAF 66 (80)
T ss_dssp EEEEEECSCHHHHHHH------HHHHHHSCTTTEEEEEEETTTC-SSTHHHHHHHTCCEEEEEEE----TTEEE
T ss_pred eEEEeCCCCCchHHHH------HHHHHHHHhcCCeEEEEEecCC-hhhHHHHHHcCCCcCCEEEE----CCEEE
Confidence 4567789999999996 445566654 3555555542 13456778899999999977 47654
No 248
>2bwb_A Ubiquitin-like protein DSK2; UBA, signaling protein; 2.3A {Saccharomyces cerevisiae} SCOP: a.5.2.1 PDB: 2bwe_A
Probab=96.57 E-value=0.0036 Score=42.37 Aligned_cols=39 Identities=8% Similarity=0.025 Sum_probs=34.8
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhc
Q 020843 10 KQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYV 49 (320)
Q Consensus 10 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~ 49 (320)
-++.|.+.+++ +-.+.+.+++.|.+++||++.||+..|+
T Consensus 7 ~~~~i~~L~~M-GF~d~~~~~~AL~~~~gnv~~Ave~L~~ 45 (46)
T 2bwb_A 7 YEHQLRQLNDM-GFFDFDRNVAALRRSGGSVQGALDSLLN 45 (46)
T ss_dssp THHHHHHHHHT-TCCCHHHHHHHHHHHTTCHHHHHHHHHC
T ss_pred HHHHHHHHHHc-CCCcHHHHHHHHHHhCCCHHHHHHHHHc
Confidence 36789999999 5578889999999999999999998886
No 249
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=96.55 E-value=0.0083 Score=53.85 Aligned_cols=92 Identities=9% Similarity=-0.003 Sum_probs=58.3
Q ss_pred CC-eEEEEEe-CCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHH-H--------------------------H
Q 020843 180 DK-WLLVNLQ-STKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEG-K--------------------------K 230 (320)
Q Consensus 180 ~K-~LLV~l~-~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg-~--------------------------~ 230 (320)
+| |++|+|+ .+||+.|..--..+ .....++-+.++-++.+.+++.+. . +
T Consensus 28 Gk~~vvL~f~pa~~cpvC~~el~~l--~~l~~ef~~~~v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~ 105 (233)
T 2v2g_A 28 GNSWGVLFSHPRDFTPVSTTELGRV--IQLEGDFKKRGVKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETRE 105 (233)
T ss_dssp CSSEEEEEECSCSSCHHHHHHHHHH--HHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHHTCCSSCSSCEEECTTCH
T ss_pred CCCeEEEEEECCCCCCCcHHHHHHH--HHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhhCcccCCceEEEECChHH
Confidence 55 9999999 88999997543211 111122223466777776665431 2 2
Q ss_pred HHHHcCCC------------CCcEEEEEecCCCceEEEEecC----CChHHHHHHHHHHH
Q 020843 231 VCTYYKLD------------SIPVVLVVDPITGQKMRSWCGM----VQPESLLEDLVPFM 274 (320)
Q Consensus 231 ~~~~Y~v~------------~~P~i~Iidp~tG~~v~~~~G~----~~~~~fl~~L~~fl 274 (320)
+++.|++. .+|+++|||| .|+.+..+.|. .+.++++..|....
T Consensus 106 va~~ygv~~~~~~~~~g~~~~~p~~fiID~-~G~I~~~~~~~~~~gr~~~eilr~l~~Lq 164 (233)
T 2v2g_A 106 LAVKLGMVDPDERTSTGMPLTCRAVFIIGP-DKKLKLSILYPATTGRNFSEILRVIDSLQ 164 (233)
T ss_dssp HHHHTTCEEEEEECTTCCEEECEEEEEECT-TSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHHhCCcCcccccCCCcccccceEEEECC-CCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 34445542 4799999998 58887776543 36788888877664
No 250
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=96.51 E-value=0.016 Score=51.33 Aligned_cols=90 Identities=12% Similarity=0.007 Sum_probs=55.5
Q ss_pred cCCeEEEEEe-CCCCcchh-hhhhccCCCHHHHHHHhcce-EEEEeecCChH-HHH-------------------HHHHc
Q 020843 179 QDKWLLVNLQ-STKEFSSH-MLNRDTWANEAVSQTISTNF-IFWQVYDDTSE-GKK-------------------VCTYY 235 (320)
Q Consensus 179 ~~K~LLV~l~-~~~~f~c~-~lnRdvw~n~~V~~~l~~nF-V~~q~d~~s~e-g~~-------------------~~~~Y 235 (320)
.+||++|+|+ ..||+.|. .--..+ ++...++-+.++ .++.++.++++ ..+ +++.|
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l--~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~ 109 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRY--NELAPVFKKYGVDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEFTEGM 109 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHH--HHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHHHHHT
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHH--HHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHHHHHh
Confidence 5899999999 99999998 221111 111122223467 67777766543 233 33445
Q ss_pred CCC-----------CCcEEEEEecCCCceEEEEecC---------CChHHHHHHHHH
Q 020843 236 KLD-----------SIPVVLVVDPITGQKMRSWCGM---------VQPESLLEDLVP 272 (320)
Q Consensus 236 ~v~-----------~~P~i~Iidp~tG~~v~~~~G~---------~~~~~fl~~L~~ 272 (320)
++. ..|+.+|| + .|..+..+.|. .+++++++.|..
T Consensus 110 gv~~~~~~~g~~~~~~p~t~li-~-~G~i~~~~~~~~~~~~~~~~~~~~~il~~l~~ 164 (241)
T 1nm3_A 110 GMLVGKEDLGFGKRSWRYSMLV-K-NGVVEKMFIEPNEPGDPFKVSDADTMLKYLAP 164 (241)
T ss_dssp TCEEECTTTTCCEEECCEEEEE-E-TTEEEEEEECCSCSSCCCSSSSHHHHHHHHCT
T ss_pred CceeecccccCcccceeEEEEE-E-CCEEEEEEEeccCCCccceecCHHHHHHHhhh
Confidence 442 34888888 6 69888777664 356777777654
No 251
>1veg_A NEDD8 ultimate buster-1; ubiquitin associated domain, UBA domain, three helix bundle, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1
Probab=96.50 E-value=0.003 Score=48.19 Aligned_cols=41 Identities=15% Similarity=0.080 Sum_probs=38.1
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCCC
Q 020843 10 KQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNE 52 (320)
Q Consensus 10 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 52 (320)
.+++|.+++++ |-+.+.|+..|.+++||++.|++..|.+.+
T Consensus 29 ~ee~I~~Lv~M--GF~~~~A~~AL~~t~gdve~A~e~L~sh~~ 69 (83)
T 1veg_A 29 SQESINQLVYM--GFDTVVAEAALRVFGGNVQLAAQTLAHHGG 69 (83)
T ss_dssp CHHHHHHHHHH--SCCHHHHHHHHHHTTTCHHHHHHHHHHHTS
T ss_pred CHHHHHHHHHc--CCCHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 47899999999 899999999999999999999999998655
No 252
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.50 E-value=0.011 Score=47.99 Aligned_cols=75 Identities=8% Similarity=0.092 Sum_probs=47.4
Q ss_pred ccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCC--hHH-HHHHHHcCCCCCcEE
Q 020843 167 GSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDT--SEG-KKVCTYYKLDSIPVV 243 (320)
Q Consensus 167 gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s--~eg-~~~~~~Y~v~~~P~i 243 (320)
....+.+..+.+.++ |+| |..+||+.|+.+.+ +.+-+.-.|..+.++.+. ++. ..+.+.|++.++|+|
T Consensus 14 ~~~~~~~~~~i~~~~-vvv-f~~~~Cp~C~~~~~-------~L~~~~i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l 84 (130)
T 2cq9_A 14 TAPVNQIQETISDNC-VVI-FSKTSCSYCTMAKK-------LFHDMNVNYKVVELDLLEYGNQFQDALYKMTGERTVPRI 84 (130)
T ss_dssp CCHHHHHHHHHHHSS-EEE-EECSSCSHHHHHHH-------HHHHHTCCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEE
T ss_pred HHHHHHHHHHHcCCc-EEE-EEcCCChHHHHHHH-------HHHHcCCCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEE
Confidence 355666666666665 444 78899999988743 222334467666665542 222 347788999999998
Q ss_pred EEEecCCCceE
Q 020843 244 LVVDPITGQKM 254 (320)
Q Consensus 244 ~Iidp~tG~~v 254 (320)
+ + .|+.+
T Consensus 85 ~-i---~G~~i 91 (130)
T 2cq9_A 85 F-V---NGTFI 91 (130)
T ss_dssp E-E---TTEEE
T ss_pred E-E---CCEEE
Confidence 5 4 36554
No 253
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=96.49 E-value=0.0084 Score=51.09 Aligned_cols=43 Identities=19% Similarity=0.278 Sum_probs=33.1
Q ss_pred HHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 230 KVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 230 ~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
+.++.+++.++|+++| +|+.+....|..+.+.|.+.|...+.+
T Consensus 143 ~~a~~~gv~gtPt~~v----ng~~~~~~~G~~~~e~l~~~i~~l~~k 185 (192)
T 3h93_A 143 KLAMAYQVTGVPTMVV----NGKYRFDIGSAGGPEETLKLADYLIEK 185 (192)
T ss_dssp HHHHHHTCCSSSEEEE----TTTEEEEHHHHTSHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCeEEE----CCEEEecccccCCHHHHHHHHHHHHHH
Confidence 3455678999999987 477664445888999999998888764
No 254
>2jy5_A Ubiquilin-1; UBA, alternative splicing, cytoplasm, nucleus, phosphoprotein, proteasome, signaling protein; NMR {Homo sapiens} PDB: 2jy6_B
Probab=96.33 E-value=0.0058 Score=42.37 Aligned_cols=40 Identities=20% Similarity=0.110 Sum_probs=35.4
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcC
Q 020843 10 KQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVG 50 (320)
Q Consensus 10 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~ 50 (320)
-.++|.+.+++ +=.+.+.|++.|.+++||++.|++..|..
T Consensus 12 ~~~~l~~L~~M-GF~~~~~~~~AL~~t~gn~e~A~e~L~~~ 51 (52)
T 2jy5_A 12 FQQQLEQLSAM-GFLNREANLQALIATGGDINAAIERLLGS 51 (52)
T ss_dssp THHHHHHHHHT-TCCCHHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHHHhCCCHHHHHHHHHhC
Confidence 46899999999 44499999999999999999999988764
No 255
>1vej_A Riken cDNA 4931431F19; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1
Probab=96.30 E-value=0.0078 Score=44.91 Aligned_cols=42 Identities=17% Similarity=0.144 Sum_probs=37.3
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCCC
Q 020843 10 KQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNE 52 (320)
Q Consensus 10 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 52 (320)
-+++|.+++++ +-.+.+.+++.|.+++||++.||+..|...+
T Consensus 29 ye~qi~qL~eM-GF~dr~~~~~AL~~t~Gnve~Ave~L~~~~~ 70 (74)
T 1vej_A 29 YQQELEELKAL-GFANRDANLQALVATDGDIHAAIEMLLGASG 70 (74)
T ss_dssp SHHHHHHHHHH-TCCCHHHHHHHHHHTTSCHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHc-CCCcHHHHHHHHHHhCCCHHHHHHHHHhCCC
Confidence 46799999999 5568999999999999999999999998643
No 256
>1wr1_B Ubiquitin-like protein DSK2; UBA domain, UBA-ubiquitin complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1
Probab=96.25 E-value=0.006 Score=43.39 Aligned_cols=39 Identities=10% Similarity=0.100 Sum_probs=35.2
Q ss_pred HHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcC
Q 020843 11 QSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVG 50 (320)
Q Consensus 11 ~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~ 50 (320)
+++|++.+++ +-.+.+.+++.|.+++||++.||+..|..
T Consensus 18 ~~qi~~L~~M-GF~d~~~~~~AL~~~~gnve~Ave~L~~~ 56 (58)
T 1wr1_B 18 EHQLRQLNDM-GFFDFDRNVAALRRSGGSVQGALDSLLNG 56 (58)
T ss_dssp HHHHHHHHHH-TCCCHHHHHHHHHHHTSCHHHHHHHHHHT
T ss_pred HHHHHHHHHc-CCCcHHHHHHHHHHhCCCHHHHHHHHHhC
Confidence 5689999999 55789999999999999999999999874
No 257
>1wiv_A UBP14, ubiquitin-specific protease 14; ubiquitin associated domain, UBA domain, three helix bundle, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.5.2.1
Probab=96.15 E-value=0.0089 Score=44.43 Aligned_cols=42 Identities=21% Similarity=0.305 Sum_probs=38.4
Q ss_pred chHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCCC
Q 020843 9 DKQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNE 52 (320)
Q Consensus 9 ~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 52 (320)
...++|.+.+++ |-+.+.|++-|.+++||++.|++-.|+..+
T Consensus 28 ~~~~~v~~L~~M--GF~~~~a~~AL~~t~~nve~Ave~L~~~~~ 69 (73)
T 1wiv_A 28 IDQSSVDTLLSF--GFAEDVARKALKASGGDIEKATDWVFNNSG 69 (73)
T ss_dssp SCHHHHHHHHHH--TCCHHHHHHHHHHTTSCHHHHHHHHHHSCC
T ss_pred CCHHHHHHHHHc--CCCHHHHHHHHHHhCCCHHHHHHHHHhCCC
Confidence 457899999999 899999999999999999999999998654
No 258
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=96.08 E-value=0.045 Score=46.03 Aligned_cols=87 Identities=13% Similarity=-0.031 Sum_probs=50.9
Q ss_pred cCCeEEEEEe-CCCCcchhh--hhhccCCCHHHHHHHhcce-EEEEeecCChH-HHHH--------------------HH
Q 020843 179 QDKWLLVNLQ-STKEFSSHM--LNRDTWANEAVSQTISTNF-IFWQVYDDTSE-GKKV--------------------CT 233 (320)
Q Consensus 179 ~~K~LLV~l~-~~~~f~c~~--lnRdvw~n~~V~~~l~~nF-V~~q~d~~s~e-g~~~--------------------~~ 233 (320)
++||++|+|+ ..||+.|.. +.. + ++...++-+.++ .++.++.++++ ..++ ++
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~-l--~~~~~~~~~~gv~~vv~Is~d~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~ 106 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPG-Y--VEQAAAIHGKGVDIIACMAVNDSFVMDAWGKAHGADDKVQMLADPGGAFTK 106 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHH-H--HHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTTSEEEECTTSHHHH
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHH-H--HHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcCCCcceEEEECCCCcHHH
Confidence 5789999987 899999987 211 0 011122223456 66666665543 2333 33
Q ss_pred HcCCCC-----------CcEEEEEecCCCceEEEEecC-------CChHHHHHHH
Q 020843 234 YYKLDS-----------IPVVLVVDPITGQKMRSWCGM-------VQPESLLEDL 270 (320)
Q Consensus 234 ~Y~v~~-----------~P~i~Iidp~tG~~v~~~~G~-------~~~~~fl~~L 270 (320)
.|++.. .|+.+|| + .|+.+..+.+. ..++.+++.|
T Consensus 107 ~~gv~~~~~~~~g~~~~~p~t~lI-~-~G~I~~~~~~~~~~~~~~~~~~~~~~~~ 159 (167)
T 2wfc_A 107 AVDMELDLSAVLGNVRSKRYSLVI-E-DGVVTKVNVEPDGKGLTCSLAPNILSQL 159 (167)
T ss_dssp HTTCEECCHHHHSSCEECCEEEEE-E-TTEEEEEEECTTSSSSSTTSHHHHHHHH
T ss_pred HcCCccccccccCcccceEEEEEE-e-CCEEEEEEecCCCCcceeccHHHHHHHh
Confidence 444432 3888888 6 68877766542 3466666655
No 259
>2dkl_A Trinucleotide repeat containing 6C protein; TNRC6C, KIAA1582 protein, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=95.99 E-value=0.011 Score=45.28 Aligned_cols=40 Identities=18% Similarity=0.328 Sum_probs=37.2
Q ss_pred HHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCCC
Q 020843 11 QSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNE 52 (320)
Q Consensus 11 ~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 52 (320)
.++|.+++++ |-+.+.|++.|..++||+|.|++-.|+...
T Consensus 22 ~~~I~qL~~M--GF~~~~a~~AL~~~n~n~e~A~ewL~~h~~ 61 (85)
T 2dkl_A 22 SRLIKQLTDM--GFPREPAEEALKSNNMNLDQAMSALLEKKV 61 (85)
T ss_dssp HHHHHHHHHH--TCCHHHHHHHHHHTTSCHHHHHHHHHTTSC
T ss_pred HHHHHHHHHc--CCCHHHHHHHHHHcCCCHHHHHHHHHHCcC
Confidence 7789999999 899999999999999999999999998654
No 260
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=95.95 E-value=0.021 Score=41.65 Aligned_cols=75 Identities=11% Similarity=0.082 Sum_probs=47.4
Q ss_pred EEEEeCCCCcchhhhhhccCCCHHHHHHHh--cceEEEEeecCChH--HHHHHHHcC--CCCCcEEEEEecCCCceEEEE
Q 020843 184 LVNLQSTKEFSSHMLNRDTWANEAVSQTIS--TNFIFWQVYDDTSE--GKKVCTYYK--LDSIPVVLVVDPITGQKMRSW 257 (320)
Q Consensus 184 LV~l~~~~~f~c~~lnRdvw~n~~V~~~l~--~nFV~~q~d~~s~e--g~~~~~~Y~--v~~~P~i~Iidp~tG~~v~~~ 257 (320)
++.|+.+||+.|+.+.+ .+.++.. .++-+..+|++... ...+.+.|+ +.++|+|. ++ |+.+
T Consensus 3 v~~f~~~~C~~C~~~~~------~l~~l~~~~~~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i~-~~---g~~i--- 69 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKD------LAEKLSNERDDFQYQYVDIRAEGITKEDLQQKAGKPVETVPQIF-VD---QQHI--- 69 (85)
T ss_dssp EEEECCTTSTHHHHHHH------HHHHHHHHHSSCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEEE-ET---TEEE---
T ss_pred EEEEeCCCCCCHHHHHH------HHHHHHhcCCCceEEEEecccChHHHHHHHHHhCCCCceeCeEE-EC---CEEE---
Confidence 56788899999998853 2233222 35667777765422 246888898 89999984 43 6554
Q ss_pred ecCCChHHHHHHHHHHH
Q 020843 258 CGMVQPESLLEDLVPFM 274 (320)
Q Consensus 258 ~G~~~~~~fl~~L~~fl 274 (320)
.|+ +++.+.+.+.+
T Consensus 70 ~~~---~~l~~~~~~~~ 83 (85)
T 1ego_A 70 GGY---TDFAAWVKENL 83 (85)
T ss_dssp ESS---HHHHHHHHHHH
T ss_pred ECH---HHHHHHHHHhc
Confidence 342 55655555543
No 261
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=95.94 E-value=0.01 Score=47.47 Aligned_cols=41 Identities=24% Similarity=0.336 Sum_probs=37.4
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCC
Q 020843 10 KQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGN 51 (320)
Q Consensus 10 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~ 51 (320)
-+++|+++.++ +-.+++.+++.|.+++||++.||+..|+.+
T Consensus 66 ~~~qL~qL~eM-GF~d~~~ni~AL~~t~Gdve~AVe~L~~~~ 106 (108)
T 2cwb_A 66 WQPQLQQLRDM-GIQDDELSLRALQATGGDIQAALELIFAGG 106 (108)
T ss_dssp THHHHHHHHTT-TCCCHHHHHHHHHHHTSCHHHHHHHHHHTS
T ss_pred hHHHHHHHHHc-CCCCHHHHHHHHHHhCCCHHHHHHHHHhcC
Confidence 37799999999 778999999999999999999999999864
No 262
>2dak_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5, USP 5, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.91 E-value=0.0084 Score=43.14 Aligned_cols=44 Identities=18% Similarity=0.370 Sum_probs=39.0
Q ss_pred CcchHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCCC
Q 020843 7 ANDKQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNE 52 (320)
Q Consensus 7 ~~~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 52 (320)
+...+++|.+++++ |-+.+.|++-|.+++||+|.|++-.|+..+
T Consensus 6 ~~~~~~~v~~L~~M--GF~~~~a~~AL~~t~~nve~A~e~L~~~~~ 49 (63)
T 2dak_A 6 SGPPEDCVTTIVSM--GFSRDQALKALRATNNSLERAVDWIFSHID 49 (63)
T ss_dssp CCCCHHHHHHHHHH--TCCHHHHHHHHHHTTSCSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHc--CCCHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 34468899999999 889999999999999999999999998543
No 263
>2l2d_A OTU domain-containing protein 7A; UBA fold, structural genomics, PSI-biology, protein structur initiative, northeast structural genomics consortium; NMR {Homo sapiens}
Probab=95.88 E-value=0.014 Score=41.99 Aligned_cols=42 Identities=21% Similarity=0.418 Sum_probs=38.0
Q ss_pred CCcchHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHh
Q 020843 6 SANDKQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFY 48 (320)
Q Consensus 6 ~~~~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff 48 (320)
++-+.+..|+.|+-- ||+.+..|+.+||--||||..|++.|=
T Consensus 13 mt~dmdavls~fvrs-tgaepgLaRDlleGKnWDl~AAL~D~e 54 (73)
T 2l2d_A 13 MTLDMDAVLSDFVRS-TGAEPGLARDLLEGKNWDLTAALSDYE 54 (73)
T ss_dssp SSCCHHHHHHHHHHH-HCCCHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHh-cCCCcchhHHhhccCCccHhHHhhhHH
Confidence 344578999999999 999999999999999999999999984
No 264
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=95.84 E-value=0.024 Score=48.31 Aligned_cols=39 Identities=13% Similarity=0.014 Sum_probs=27.0
Q ss_pred cCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc---ceEEEEeec
Q 020843 179 QDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST---NFIFWQVYD 223 (320)
Q Consensus 179 ~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~---nFV~~q~d~ 223 (320)
.+|..+|.|.+.||+.|..+.. .+.++.++ +.+|..+++
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~------~l~~l~~~~~~~v~~~~~~~ 65 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEP------MVEDWAKTAPQDVVLKQVPI 65 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHH------HHHHHHHTCCTTEEEEEEEC
T ss_pred CCCeEEEEEECCCCccHHHhhH------HHHHHHHHCCCCeEEEEEec
Confidence 4788999999999999999964 34444433 455555544
No 265
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=95.79 E-value=0.043 Score=46.73 Aligned_cols=76 Identities=9% Similarity=-0.146 Sum_probs=43.9
Q ss_pred cCCeEEEEEe-CCCCcchhh--hhhccCCCHHHHHHHhcceEEEE-eecCChH-HH--------------------HHHH
Q 020843 179 QDKWLLVNLQ-STKEFSSHM--LNRDTWANEAVSQTISTNFIFWQ-VYDDTSE-GK--------------------KVCT 233 (320)
Q Consensus 179 ~~K~LLV~l~-~~~~f~c~~--lnRdvw~n~~V~~~l~~nFV~~q-~d~~s~e-g~--------------------~~~~ 233 (320)
.+||++|+++ ..||+.|.. +.. + ++...++-..++.++. +..++++ .. ++++
T Consensus 42 ~gk~vvL~f~pa~wcp~C~~~e~p~-l--~~~~~~~~~~gv~vv~~iS~D~~~~~~~f~~~~~~~~~fp~l~D~~~~va~ 118 (173)
T 3mng_A 42 KGKKGVLFGVPGAFTPGCSKTHLPG-F--VEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGK 118 (173)
T ss_dssp TTSEEEEEECSCTTCHHHHHTHHHH-H--HHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHTTCTTTCEEEECTTCHHHH
T ss_pred CCCcEEEEEEeCCCCCCCCHHHHHH-H--HHHHHHHHhCCCEEEEEEcCCCHHHHHHHHHHhCCCCceEEEECCChHHHH
Confidence 5787777666 999999983 431 0 1111222234565554 5555533 12 3444
Q ss_pred HcCCC-------------CCcEEEEEecCCCceEEEEec
Q 020843 234 YYKLD-------------SIPVVLVVDPITGQKMRSWCG 259 (320)
Q Consensus 234 ~Y~v~-------------~~P~i~Iidp~tG~~v~~~~G 259 (320)
.|++. ..|+.+||| .|.....+.+
T Consensus 119 ~yGv~~~~~~~~~~g~~~~~r~tfvID--dG~I~~~~v~ 155 (173)
T 3mng_A 119 ETDLLLDDSLVSIFGNRRLKRFSMVVQ--DGIVKALNVE 155 (173)
T ss_dssp HHTCBCCSTTHHHHSSCCBCCEEEEEE--TTEEEEEEEC
T ss_pred HhCCCcccccccccCCcceEEEEEEEE--CCEEEEEEEe
Confidence 55542 348999999 5887777654
No 266
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=95.73 E-value=0.044 Score=47.12 Aligned_cols=86 Identities=10% Similarity=0.003 Sum_probs=48.8
Q ss_pred cCCeEEEE-EeCCCCcchhh--hhhccCCCHHHHHHHhcceE-EEEeecCChH-HHH--------------------HHH
Q 020843 179 QDKWLLVN-LQSTKEFSSHM--LNRDTWANEAVSQTISTNFI-FWQVYDDTSE-GKK--------------------VCT 233 (320)
Q Consensus 179 ~~K~LLV~-l~~~~~f~c~~--lnRdvw~n~~V~~~l~~nFV-~~q~d~~s~e-g~~--------------------~~~ 233 (320)
++||++|+ +...||+.|.. +.. + ++...++-..++. ++.++.++++ ..+ +++
T Consensus 55 ~Gk~vvL~f~~a~wcp~C~~~e~p~-l--~~~~~~~~~~gv~~vv~Is~d~~~~~~~f~~~~~~~~~fp~l~D~~~~va~ 131 (184)
T 3uma_A 55 KGKRVVLFAVPGAFTPTCSLNHLPG-Y--LENRDAILARGVDDIAVVAVNDLHVMGAWATHSGGMGKIHFLSDWNAAFTK 131 (184)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHH-H--HHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHHTCTTTSEEEECTTCHHHH
T ss_pred CCCCEEEEEEcCCCCCCcCHHHHHH-H--HHHHHHHHHcCCCEEEEEECCCHHHHHHHHHHhCCCCceEEEEcCchHHHH
Confidence 46765555 55999999986 321 0 1111222234566 7777776643 233 344
Q ss_pred HcCCC-----------CCcEEEEEecCCCceEEEEecC-------CChHHHHHH
Q 020843 234 YYKLD-----------SIPVVLVVDPITGQKMRSWCGM-------VQPESLLED 269 (320)
Q Consensus 234 ~Y~v~-----------~~P~i~Iidp~tG~~v~~~~G~-------~~~~~fl~~ 269 (320)
.|++. ..|+.+||+ .|..+..+.|. .+++++|++
T Consensus 132 ~yGv~~~~~~~g~g~~~~r~tfiId--dG~I~~~~~~~~~g~~~~~~~~~vL~~ 183 (184)
T 3uma_A 132 AIGMEIDLSAGTLGIRSKRYSMLVE--DGVVKALNIEESPGQATASGAAAMLEL 183 (184)
T ss_dssp HTTCEEEEGGGTCEEEECCEEEEEE--TTEEEEEEECSSTTCCSTTSHHHHHHH
T ss_pred HcCCceeccccCCcccceeEEEEEC--CCEEEEEEEeCCCCCCcCCCHHHHHhh
Confidence 45542 257788885 68887777553 345666654
No 267
>1wgn_A UBAP1, ubiquitin associated protein; ubiquitin associated protein 1 (UBAP1), UBA domain, structural genomics; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=95.72 E-value=0.0096 Score=42.64 Aligned_cols=42 Identities=7% Similarity=0.304 Sum_probs=38.8
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCCCC
Q 020843 10 KQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNES 53 (320)
Q Consensus 10 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~~~ 53 (320)
+.+.|++.+++ |-+.++|+.-|+++++|+|+|++=.|+..+.
T Consensus 19 e~e~V~~LvsM--GFs~~qA~kALKat~~NvErAaDWLFSH~D~ 60 (63)
T 1wgn_A 19 ERQCVETVVNM--GYSYECVLRAMKKKGENIEQILDYLFAHSGP 60 (63)
T ss_dssp HHHHHHHHHHH--HCCHHHHHHHHHHHCSCHHHHHHHHHHHSCC
T ss_pred hHHHHHHHHHc--CCCHHHHHHHHHHcCCCHHHHHHHHHhCCCC
Confidence 67889999999 8999999999999999999999999997653
No 268
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=95.61 E-value=0.084 Score=47.03 Aligned_cols=92 Identities=13% Similarity=0.112 Sum_probs=63.9
Q ss_pred cCCeEEEEEe-CCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHH--------------------------HHH
Q 020843 179 QDKWLLVNLQ-STKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEG--------------------------KKV 231 (320)
Q Consensus 179 ~~K~LLV~l~-~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg--------------------------~~~ 231 (320)
.+||++++|| .++|+.|..=-..+ ++...+|-+.+..++.++.++... .++
T Consensus 51 ~GK~vVL~FyP~d~TpvCt~E~~~f--~~~~~~f~~~g~~vigiS~Ds~~sh~aw~~~~~~~~~~~~l~fpllsD~~~~v 128 (216)
T 3sbc_A 51 KGKYVVLAFIPLAFTFVSPTEIIAF--SEAAKKFEEQGAQVLFASTDSEYSLLAWTNIPRKEGGLGPINIPLLADTNHSL 128 (216)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHH--HHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHH
T ss_pred CCCeEEEEEEcCCCCCcCchhhhHH--HHhHHhhccCCceEEEeecCchhhHHHHHHHHHHhCCccCcccceEeCCCCHH
Confidence 5899999999 78899996543221 234445556689999999887432 346
Q ss_pred HHHcCC------CCCcEEEEEecCCCceEEEEec----CCChHHHHHHHHHH
Q 020843 232 CTYYKL------DSIPVVLVVDPITGQKMRSWCG----MVQPESLLEDLVPF 273 (320)
Q Consensus 232 ~~~Y~v------~~~P~i~Iidp~tG~~v~~~~G----~~~~~~fl~~L~~f 273 (320)
++.|++ ..++.++|||| .|.....+.- -.+.+++|..|+.+
T Consensus 129 ak~YGv~~~~~g~~~R~tFiID~-~G~Ir~~~v~~~~~grn~dEiLr~l~Al 179 (216)
T 3sbc_A 129 SRDYGVLIEEEGVALRGLFIIDP-KGVIRHITINDLPVGRNVDEALRLVEAF 179 (216)
T ss_dssp HHHHTCEETTTTEECEEEEEECT-TSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHHcCCeeccCCceeeEEEEECC-CCeEEEEEEcCCCCCCCHHHHHHHHHHh
Confidence 677776 24789999998 4866544421 14788888877765
No 269
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=95.57 E-value=0.094 Score=46.33 Aligned_cols=92 Identities=11% Similarity=0.053 Sum_probs=56.4
Q ss_pred CeEEEE-EeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHH-----------------------------HH
Q 020843 181 KWLLVN-LQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEG-----------------------------KK 230 (320)
Q Consensus 181 K~LLV~-l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg-----------------------------~~ 230 (320)
+|++|+ +..+||+.|..--..+ +....++-+.++.++.+++++.+. .+
T Consensus 32 ~~vvL~~~~a~~cp~C~~el~~l--~~l~~~f~~~~v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~ 109 (224)
T 1prx_A 32 SWGILFSHPRDFTPVCTTELGRA--AKLAPEFAKRNVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRE 109 (224)
T ss_dssp SEEEEEEESCSSCHHHHHHHHHH--HHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEEECTTCH
T ss_pred CeEEEEEECCCCCCCcHHHHHHH--HHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhhCcccccCcCcceeecCchH
Confidence 475555 4688999997542211 111122223467777777665432 23
Q ss_pred HHHHcCCC------------CCcEEEEEecCCCceEEEEecC----CChHHHHHHHHHHHh
Q 020843 231 VCTYYKLD------------SIPVVLVVDPITGQKMRSWCGM----VQPESLLEDLVPFMD 275 (320)
Q Consensus 231 ~~~~Y~v~------------~~P~i~Iidp~tG~~v~~~~G~----~~~~~fl~~L~~fld 275 (320)
+++.|++. .+|+++|||| .|..+..+.|. .+.++++..|+....
T Consensus 110 va~~ygv~~~~~~~~~g~~~~~p~~fiID~-~G~I~~~~~~~~~~gr~~~eil~~i~~l~~ 169 (224)
T 1prx_A 110 LAILLGMLDPAEKDEKGMPVTARVVFVFGP-DKKLKLSILYPATTGRNFDEILRVVISLQL 169 (224)
T ss_dssp HHHHTTSSCSCTTCSSSCCTTCCEEEEECT-TSBEEEEEECCTTBCCCHHHHHHHHHHHHH
T ss_pred HHHHhCCCCcccccCCCccccceEEEEECC-CCEEEEEEecCCCCCCCHHHHHHHHHHHHh
Confidence 44456552 3799999998 58887777553 367888888877653
No 270
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=95.57 E-value=0.0042 Score=51.91 Aligned_cols=98 Identities=10% Similarity=0.076 Sum_probs=62.3
Q ss_pred HHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEee-cC--------------------------
Q 020843 172 AKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVY-DD-------------------------- 224 (320)
Q Consensus 172 A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d-~~-------------------------- 224 (320)
|+...+...|..+|.|.+.+|+.|..+.+.+=.-. -|+=.|+.|.+. ..
T Consensus 6 ai~~~~~~a~~~vv~f~D~~Cp~C~~~~~~l~~l~----~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~ 81 (147)
T 3gv1_A 6 AIKEVRGNGKLKVAVFSDPDCPFCKRLEHEFEKMT----DVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRK 81 (147)
T ss_dssp SEEEEETTCCEEEEEEECTTCHHHHHHHHHHTTCC----SEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHH
T ss_pred CeeeecCCCCEEEEEEECCCChhHHHHHHHHhhcC----ceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhC
Confidence 33344566788899999999999999876542110 011112222220 00
Q ss_pred -------------ChHHHHHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 020843 225 -------------TSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDGGPR 279 (320)
Q Consensus 225 -------------s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~~~~ 279 (320)
-.+..++++.|++.++|+++|- +|+ .+.|+.+++.|.+.|...+.++-.
T Consensus 82 g~~~~~~~~~~~~v~~~~~la~~~gI~gtPt~vi~---nG~---~i~G~~~~~~l~~~i~~~~~~~~~ 143 (147)
T 3gv1_A 82 GKFPVGGSICDNPVAETTSLGEQFGFNGTPTLVFP---NGR---TQSGYSPMPQLEEIIRKNQQEGHH 143 (147)
T ss_dssp CCCCTTCCCCSCSHHHHHHHHHHTTCCSSCEEECT---TSC---EEESCCCTTHHHHHHHHTSCC---
T ss_pred CCCCCccHHHHHHHHHHHHHHHHhCCCccCEEEEE---CCE---EeeCCCCHHHHHHHHHHHHHhccc
Confidence 0235677788999999999982 465 368999999999999988876544
No 271
>2dna_A Unnamed protein product; ubiquitin associated domain, DSK2 protein, proteasome, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1
Probab=95.38 E-value=0.035 Score=40.53 Aligned_cols=42 Identities=14% Similarity=-0.008 Sum_probs=37.4
Q ss_pred HHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCCCC
Q 020843 11 QSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNES 53 (320)
Q Consensus 11 ~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~~~ 53 (320)
.+.|.+..++ +-.+.+..++.|.++++|++.||+..|.....
T Consensus 20 ~~ql~qL~~M-GF~d~~an~~AL~at~Gnve~Ave~L~~~~~~ 61 (67)
T 2dna_A 20 SKEMECLQAM-GFVNYNANLQALIATDGDTNAAIYKLKSSQGF 61 (67)
T ss_dssp HHHHHHHHHH-TCCCHHHHHHHHHHTTSCHHHHHHHHHHCCSS
T ss_pred HHHHHHHHHc-CCCcHHHHHHHHHHcCCCHHHHHHHHHhCCCc
Confidence 4589999999 66888888999999999999999999997654
No 272
>2ooa_A E3 ubiquitin-protein ligase CBL-B; alpha-helical domain; 1.56A {Homo sapiens} PDB: 2oob_A 2jnh_A 2do6_A
Probab=95.25 E-value=0.03 Score=38.73 Aligned_cols=38 Identities=11% Similarity=0.139 Sum_probs=34.4
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhc
Q 020843 10 KQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYV 49 (320)
Q Consensus 10 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~ 49 (320)
-++.|++.|++ |-|.+.|++-|..++||++.|.+.-.+
T Consensus 11 ~~~~Ia~Lm~m--GFsr~~ai~AL~~a~nnve~AaniLle 48 (52)
T 2ooa_A 11 VDAKIAKLMGE--GYAFEEVKRALEIAQNNVEVARSILRE 48 (52)
T ss_dssp CHHHHHHHHHT--TCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHc--CCCHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 35899999999 999999999999999999999887543
No 273
>2cpw_A CBL-interacting protein STS-1 variant; ubiquitin associated domain, UBA, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=95.17 E-value=0.025 Score=40.86 Aligned_cols=41 Identities=17% Similarity=0.224 Sum_probs=37.2
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCC-CHHHHHHHHhcCCC
Q 020843 10 KQSMVSSFLEIAVGQTAETAVQFLQATSW-KLDEAIQLFYVGNE 52 (320)
Q Consensus 10 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~w-dLe~Av~~ff~~~~ 52 (320)
..+.|.+.+++ |-+.+.|++-|.+++| |+|.|++-.|+..+
T Consensus 19 ~e~~i~~L~~M--GF~~~~a~~AL~~t~~~nve~A~ewL~~~~~ 60 (64)
T 2cpw_A 19 HGSALDVLLSM--GFPRARAQKALASTGGRSVQTACDWLFSHSG 60 (64)
T ss_dssp CCCHHHHHHHH--TCCHHHHHHHHHHTTTSCHHHHHHHHHSCCS
T ss_pred CHHHHHHHHHc--CCCHHHHHHHHHHcCCCCHHHHHHHHHhCCC
Confidence 35689999999 8999999999999999 99999999998654
No 274
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=95.14 E-value=0.14 Score=43.26 Aligned_cols=42 Identities=19% Similarity=0.248 Sum_probs=31.1
Q ss_pred HHHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 229 KKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 229 ~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
.++++.+++.++|+++ |+ |+.+ +.|..++++|.+.|...+++
T Consensus 140 ~~~a~~~gv~gtPt~v-in---g~~~--~~g~~~~~~l~~~i~~~l~~ 181 (195)
T 2znm_A 140 QKLTEQYRIDSTPTVI-VG---GKYR--VIFNNGFDGGVHTIKELVAK 181 (195)
T ss_dssp HHHHHHTTCCSSSEEE-ET---TTEE--ECCCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCeEE-EC---CEEE--EcCCCCHHHHHHHHHHHHHH
Confidence 3456678899999954 54 6543 46778889999999888865
No 275
>1whc_A RSGI RUH-027, UBA/UBX 33.3 kDa protein; UBA domain, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Mus musculus} SCOP: a.5.2.1
Probab=94.95 E-value=0.024 Score=40.96 Aligned_cols=41 Identities=17% Similarity=0.267 Sum_probs=37.3
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHc-CCCHHHHHHHHhcCCC
Q 020843 10 KQSMVSSFLEIAVGQTAETAVQFLQAT-SWKLDEAIQLFYVGNE 52 (320)
Q Consensus 10 ~~~~i~~F~~iTt~~~~~~A~~~Le~~-~wdLe~Av~~ff~~~~ 52 (320)
..++|.+++++ |-+.+.|++-|.++ +||+|.|++-.|+..+
T Consensus 9 ~~~~v~~L~~M--GF~~~~a~~AL~~t~~~nve~A~ewLl~~~~ 50 (64)
T 1whc_A 9 ELTALESLIEM--GFPRGRAEKALALTGNQGIEAAMDWLMEHED 50 (64)
T ss_dssp CCCHHHHHHTT--TCCHHHHHHHHHHHTSCCHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHc--CCCHHHHHHHHHHhcCCCHHHHHHHHHhCCC
Confidence 46789999999 99999999999999 7999999999998654
No 276
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=94.87 E-value=0.1 Score=40.53 Aligned_cols=75 Identities=11% Similarity=0.110 Sum_probs=46.2
Q ss_pred ccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCC---hHHHH-HHHHcCCCCCcE
Q 020843 167 GSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDT---SEGKK-VCTYYKLDSIPV 242 (320)
Q Consensus 167 gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s---~eg~~-~~~~Y~v~~~P~ 242 (320)
..+++.++...+.++ ++.|..+||+.|+... .+.+-+.-.|..+.++.+. ++... +...++..++|+
T Consensus 6 ~~~~~~~~~~i~~~~--v~vy~~~~Cp~C~~~~-------~~L~~~~i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~ 76 (113)
T 3rhb_A 6 SRMEESIRKTVTENT--VVIYSKTWCSYCTEVK-------TLFKRLGVQPLVVELDQLGPQGPQLQKVLERLTGQHTVPN 76 (113)
T ss_dssp CHHHHHHHHHHHHSS--EEEEECTTCHHHHHHH-------HHHHHTTCCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCE
T ss_pred HHHHHHHHHHHhcCC--EEEEECCCChhHHHHH-------HHHHHcCCCCeEEEeecCCCChHHHHHHHHHHhCCCCcCE
Confidence 456677777777777 4557779999998663 1222233356666665542 33233 555678899999
Q ss_pred EEEEecCCCceE
Q 020843 243 VLVVDPITGQKM 254 (320)
Q Consensus 243 i~Iidp~tG~~v 254 (320)
|. |+ |+.+
T Consensus 77 if-i~---g~~i 84 (113)
T 3rhb_A 77 VF-VC---GKHI 84 (113)
T ss_dssp EE-ET---TEEE
T ss_pred EE-EC---CEEE
Confidence 94 43 6554
No 277
>2dai_A Ubadc1, ubiquitin associated domain containing 1; UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.86 E-value=0.031 Score=42.54 Aligned_cols=41 Identities=17% Similarity=0.266 Sum_probs=37.9
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCCC
Q 020843 10 KQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNE 52 (320)
Q Consensus 10 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 52 (320)
..+.|.+.+++ |-+.+.|++-|.+++||+|.|++-.|+..+
T Consensus 29 ~e~~i~~L~~M--GF~~~~a~~AL~~t~~nve~A~ewL~~~~~ 69 (83)
T 2dai_A 29 DEAALRQLTEM--GFPENRATKALQLNHMSVPQAMEWLIEHAE 69 (83)
T ss_dssp CHHHHHHHHHH--TCCHHHHHHHHHHTTSCHHHHHHHHHHGGG
T ss_pred CHHHHHHHHHc--CCCHHHHHHHHHHhCCCHHHHHHHHHHCCC
Confidence 57899999999 999999999999999999999999998654
No 278
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=94.83 E-value=0.072 Score=40.51 Aligned_cols=60 Identities=8% Similarity=0.080 Sum_probs=37.8
Q ss_pred EEEEeCCCCcchhhhhhccCCCHHHHHHHhcc---eEEEEeecCC--hHH-HHHHHHcCCCCCcEEEEEecCCCceE
Q 020843 184 LVNLQSTKEFSSHMLNRDTWANEAVSQTISTN---FIFWQVYDDT--SEG-KKVCTYYKLDSIPVVLVVDPITGQKM 254 (320)
Q Consensus 184 LV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~n---FV~~q~d~~s--~eg-~~~~~~Y~v~~~P~i~Iidp~tG~~v 254 (320)
++.|..+||+.|+.+.+ +.+-+... |.++.++.+. ++. ..+...|++.++|+|+ ++ |+.+
T Consensus 14 v~~f~~~~C~~C~~~~~-------~L~~~~~~~~~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i~-~~---g~~i 79 (105)
T 1kte_A 14 VVVFIKPTCPFCRKTQE-------LLSQLPFKEGLLEFVDITATSDTNEIQDYLQQLTGARTVPRVF-IG---KECI 79 (105)
T ss_dssp EEEEECSSCHHHHHHHH-------HHHHSCBCTTSEEEEEGGGSTTHHHHHHHHHHHHSCCCSCEEE-ET---TEEE
T ss_pred EEEEEcCCCHhHHHHHH-------HHHHcCCCCCccEEEEccCCCCHHHHHHHHHHHhCCCCcCeEE-EC---CEEE
Confidence 45578899999987632 12222333 7776665543 232 3577789999999984 43 6554
No 279
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=94.81 E-value=0.12 Score=43.34 Aligned_cols=56 Identities=7% Similarity=-0.084 Sum_probs=32.4
Q ss_pred cC-CeEEEEEeCCCCcchhhh-hhccCCCHHHHHHHhcceE-EEEeecCChH-HHHHHHHcC
Q 020843 179 QD-KWLLVNLQSTKEFSSHML-NRDTWANEAVSQTISTNFI-FWQVYDDTSE-GKKVCTYYK 236 (320)
Q Consensus 179 ~~-K~LLV~l~~~~~f~c~~l-nRdvw~n~~V~~~l~~nFV-~~q~d~~s~e-g~~~~~~Y~ 236 (320)
.+ +.||+++...||+.|..= -..+ ++...++-..++. ++.++.++++ ..++++.++
T Consensus 42 ~gk~vvl~~~~a~wcp~C~~eh~p~l--~~~~~~~~~~g~~~vv~Is~d~~~~~~~~~~~~~ 101 (171)
T 2pwj_A 42 KDKKVVIFGLPGAYTGVCSSKHVPPY--KHNIDKFKAKGVDSVICVAINDPYTVNAWAEKIQ 101 (171)
T ss_dssp TTSEEEEEECSCTTCTTHHHHTHHHH--HHTHHHHHHTTCSEEEEEESSCHHHHHHHHHHTT
T ss_pred CCCCEEEEEecCCCCCCCCHHHHHHH--HHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHHhC
Confidence 35 467888999999999752 1111 1112233334677 7777776644 444555544
No 280
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=94.80 E-value=0.069 Score=44.32 Aligned_cols=74 Identities=8% Similarity=0.098 Sum_probs=45.5
Q ss_pred cHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCC--hHH-HHHHHHcCCCCCcEEE
Q 020843 168 SFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDT--SEG-KKVCTYYKLDSIPVVL 244 (320)
Q Consensus 168 sf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s--~eg-~~~~~~Y~v~~~P~i~ 244 (320)
+..+.++.+.+.++ |+| |..+||+.|+.+.+ +.+-+.-.|..+.++.+. ++. ..+.+.|++.++|+|+
T Consensus 37 ~~~~~~~~~i~~~~-Vvv-f~~~~Cp~C~~~k~-------~L~~~~i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~if 107 (146)
T 2ht9_A 37 APVNQIQETISDNC-VVI-FSKTSCSYCTMAKK-------LFHDMNVNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF 107 (146)
T ss_dssp CCHHHHHHHHHHCS-EEE-EECTTCHHHHHHHH-------HHHHHTCCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEE
T ss_pred HHHHHHHHHhcCCC-EEE-EECCCChhHHHHHH-------HHHHcCCCeEEEECccCcCCHHHHHHHHHHhCCCCcCeEE
Confidence 34445555555565 444 78899999988742 222334467666665542 222 3478889999999985
Q ss_pred EEecCCCceE
Q 020843 245 VVDPITGQKM 254 (320)
Q Consensus 245 Iidp~tG~~v 254 (320)
+ .|+.+
T Consensus 108 -i---~G~~i 113 (146)
T 2ht9_A 108 -V---NGTFI 113 (146)
T ss_dssp -E---TTEEE
T ss_pred -E---CCEEE
Confidence 4 36543
No 281
>2d9s_A CBL E3 ubiquitin protein ligase; UBA domain, dimer, protein binding, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=94.63 E-value=0.051 Score=37.72 Aligned_cols=40 Identities=10% Similarity=0.068 Sum_probs=35.9
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCC
Q 020843 10 KQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGN 51 (320)
Q Consensus 10 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~ 51 (320)
-++.|.+.|++ |-|.+.|++-|..++||+|.|.+.-.+-.
T Consensus 9 ~e~~I~~L~~l--GF~r~~ai~AL~~a~nnve~Aa~iL~ef~ 48 (53)
T 2d9s_A 9 LSSEIERLMSQ--GYSYQDIQKALVIAHNNIEMAKNILREFS 48 (53)
T ss_dssp SHHHHHHHHHH--TCCHHHHHHHHHHTTTCHHHHHHHHHHHT
T ss_pred hHHHHHHHHHc--CCCHHHHHHHHHHhcCCHHHHHHHHHHhc
Confidence 45779999999 99999999999999999999999877643
No 282
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=94.57 E-value=0.092 Score=46.27 Aligned_cols=93 Identities=8% Similarity=0.074 Sum_probs=56.3
Q ss_pred cCC-eEEEEE-eCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHH--------------------------HH
Q 020843 179 QDK-WLLVNL-QSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEG--------------------------KK 230 (320)
Q Consensus 179 ~~K-~LLV~l-~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg--------------------------~~ 230 (320)
.+| |++|++ ..+||+.|..--..+ .+...++=+.++.++.+++++.+. .+
T Consensus 29 ~Gk~~vvL~f~~a~~cp~C~~el~~l--~~l~~~f~~~~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~ 106 (220)
T 1xcc_A 29 IENSWAILFSHPNDFTPVCTTELAEL--GKMHEDFLKLNCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRE 106 (220)
T ss_dssp TTTSEEEEECCSCTTCHHHHHHHHHH--HHTHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSH
T ss_pred cCCCeEEEEEECCCCCCCCHHHHHHH--HHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECchhH
Confidence 355 766665 588999996532111 111122223467777777765431 22
Q ss_pred HHHHcCCC------------CCcEEEEEecCCCceEEEEecC----CChHHHHHHHHHHH
Q 020843 231 VCTYYKLD------------SIPVVLVVDPITGQKMRSWCGM----VQPESLLEDLVPFM 274 (320)
Q Consensus 231 ~~~~Y~v~------------~~P~i~Iidp~tG~~v~~~~G~----~~~~~fl~~L~~fl 274 (320)
+++.|++. ..|+++|||| .|.....+.|. .+.++++..|+...
T Consensus 107 va~~ygv~~~~~~~~~g~~~~~p~~flID~-~G~I~~~~~~~~~~g~~~~ell~~i~~lq 165 (220)
T 1xcc_A 107 LANKLKIMDEQEKDITGLPLTCRCLFFISP-EKKIKATVLYPATTGRNAHEILRVLKSLQ 165 (220)
T ss_dssp HHHHHTCEEEEEECTTSCEEECEEEEEECT-TSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHHhCCCCcccccCCCCCcccceEEEECC-CCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 44455552 3799999998 58887776542 46788888877764
No 283
>2ekk_A UBA domain from E3 ubiquitin-protein ligase HUWE1; ubiquitin associated domain, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.55 E-value=0.055 Score=36.38 Aligned_cols=39 Identities=23% Similarity=0.367 Sum_probs=35.2
Q ss_pred chHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcC
Q 020843 9 DKQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVG 50 (320)
Q Consensus 9 ~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~ 50 (320)
...+.|.+++++ |-+.+.|++-|.+++ |+|.|++-.|+.
T Consensus 8 ~~~~~v~~L~~M--GF~~~~a~~AL~~~~-n~e~A~~~L~~h 46 (47)
T 2ekk_A 8 VNQQQLQQLMDM--GFTREHAMEALLNTS-TMEQATEYLLTH 46 (47)
T ss_dssp SCHHHHHHHHHH--HCCHHHHHHHHHHSC-SHHHHHHHHHTC
T ss_pred CCHHHHHHHHHc--CCCHHHHHHHHHHcC-CHHHHHHHHHcC
Confidence 357899999999 899999999999997 999999988864
No 284
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=94.52 E-value=0.077 Score=41.53 Aligned_cols=69 Identities=4% Similarity=-0.071 Sum_probs=40.7
Q ss_pred HHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcc---eEEEEeecCC---hHHHHHHHHcCCCCCcEEEEE
Q 020843 173 KDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTN---FIFWQVYDDT---SEGKKVCTYYKLDSIPVVLVV 246 (320)
Q Consensus 173 ~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~n---FV~~q~d~~s---~eg~~~~~~Y~v~~~P~i~Ii 246 (320)
++.+.+..+ ++.|..+||+.|+.+.+- |.. +.-. |..+-++.+. ..-..+.+.|++.++|+++|
T Consensus 12 ~~~~i~~~~--vv~f~~~~Cp~C~~~~~~-L~~------~~~~~~~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~i- 81 (114)
T 2hze_A 12 VQQRLANNK--VTIFVKYTCPFCRNALDI-LNK------FSFKRGAYEIVDIKEFKPENELRDYFEQITGGKTVPRIFF- 81 (114)
T ss_dssp HHTTCCTTC--EEEEECTTCHHHHHHHHH-HTT------SCBCTTSEEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEEE-
T ss_pred HHHHhccCC--EEEEEeCCChhHHHHHHH-HHH------cCCCcCceEEEEccCCCChHHHHHHHHHHhCCCCcCEEEE-
Confidence 333333443 555788999999877431 111 1123 6665555443 12246788899999998854
Q ss_pred ecCCCceE
Q 020843 247 DPITGQKM 254 (320)
Q Consensus 247 dp~tG~~v 254 (320)
+ |+.+
T Consensus 82 ~---g~~i 86 (114)
T 2hze_A 82 G---KTSI 86 (114)
T ss_dssp T---TEEE
T ss_pred C---CEEE
Confidence 3 6654
No 285
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=94.44 E-value=0.24 Score=36.63 Aligned_cols=73 Identities=16% Similarity=0.072 Sum_probs=46.5
Q ss_pred EEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChH-H----HHHHHHcCCCCCcEEEEEecCCCceEEEEe
Q 020843 184 LVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSE-G----KKVCTYYKLDSIPVVLVVDPITGQKMRSWC 258 (320)
Q Consensus 184 LV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~e-g----~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~ 258 (320)
++.++.+||+.|+... .+.+-+.-.|..+.++..+.+ . ..+.+.+++.++|+|.+ .|+. +.
T Consensus 14 v~ly~~~~Cp~C~~~~-------~~L~~~gi~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~----~g~~---i~ 79 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTL-------EFLKREGVDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK----GDKH---VL 79 (92)
T ss_dssp SEEEECTTCHHHHHHH-------HHHHHHTCCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE----TTEE---EE
T ss_pred EEEEECCCChHHHHHH-------HHHHHcCCCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE----CCEE---Ee
Confidence 3446678999998762 222233445766666643332 2 66778889999999986 3543 45
Q ss_pred cCCChHHHHHHHH
Q 020843 259 GMVQPESLLEDLV 271 (320)
Q Consensus 259 G~~~~~~fl~~L~ 271 (320)
|+ +++++.+.|.
T Consensus 80 G~-~~~~l~~~l~ 91 (92)
T 3ic4_A 80 GY-NEEKLKELIR 91 (92)
T ss_dssp SC-CHHHHHHHHH
T ss_pred CC-CHHHHHHHhc
Confidence 65 7877766653
No 286
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=94.36 E-value=0.15 Score=45.51 Aligned_cols=92 Identities=17% Similarity=0.198 Sum_probs=63.2
Q ss_pred cCCeEEEEEe-CCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHH--------------------------HHH
Q 020843 179 QDKWLLVNLQ-STKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEG--------------------------KKV 231 (320)
Q Consensus 179 ~~K~LLV~l~-~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg--------------------------~~~ 231 (320)
.+||++|+|| .++|+-|..=..++ ++...+|-+.+..++.++.++... .++
T Consensus 55 ~GK~vVL~FyP~d~TpvCt~E~~~f--~~~~~eF~~~g~~vigiS~Ds~~sh~~w~~~~~~~~~~~~l~fpllsD~~~~v 132 (219)
T 3tue_A 55 KGKWVVLFFYPLDFTFVCPTEVIAF--SDSVSRFNELNCEVLACSIDSEYAHLQWTLQDRKKGGLGTMAIPILADKTKNI 132 (219)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHH--HTTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHH
T ss_pred CCCEEEEEEecccCCCCCchhHhhH--HHHHhhhccCCcEEEEeeCCchhhHHHHhhhhHHhcCccccccccccCcccHH
Confidence 5899999999 67899996543222 234455666789999999887432 335
Q ss_pred HHHcCC----C--CCcEEEEEecCCCceEEEEec----CCChHHHHHHHHHH
Q 020843 232 CTYYKL----D--SIPVVLVVDPITGQKMRSWCG----MVQPESLLEDLVPF 273 (320)
Q Consensus 232 ~~~Y~v----~--~~P~i~Iidp~tG~~v~~~~G----~~~~~~fl~~L~~f 273 (320)
++.|++ . .+-.++|||| .|.....+.- -...+++|..|+..
T Consensus 133 a~~yGv~~~~~g~~~R~tFiIDp-~g~Ir~~~~~~~~~gr~~~EvLr~l~aL 183 (219)
T 3tue_A 133 ARSYGVLEESQGVAYRGLFIIDP-HGMLRQITVNDMPVGRSVEEVLRLLEAF 183 (219)
T ss_dssp HHHTTCEETTTTEECEEEEEECT-TSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HHHcCCcccCCCeeEEEEEEECC-CCeEEEEEEecCCCCCCHHHHHHHHHHh
Confidence 667776 1 2568899999 5876555421 14788888887765
No 287
>2cp9_A EF-TS, EF-TSMT, elongation factor TS, mitochondrial; UBA, structural genomics, human, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.2
Probab=94.32 E-value=0.039 Score=39.92 Aligned_cols=39 Identities=10% Similarity=0.071 Sum_probs=35.2
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhc
Q 020843 10 KQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYV 49 (320)
Q Consensus 10 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~ 49 (320)
..+.|..+.+. ||+....|+.-|+.+|||++.||...=.
T Consensus 9 t~~~Vk~LRe~-TGag~~dcKkAL~e~~GDi~~Ai~~Lr~ 47 (64)
T 2cp9_A 9 SKELLMKLRRK-TGYSFVNCKKALETCGGDLKQAEIWLHK 47 (64)
T ss_dssp CCHHHHHHHHH-HCCCHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred CHHHHHHHHHH-hCCCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 35789999999 9999999999999999999999987654
No 288
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=94.20 E-value=0.27 Score=34.43 Aligned_cols=69 Identities=16% Similarity=0.259 Sum_probs=40.9
Q ss_pred EEEEeCCCCcchhhhhhccCCCHHHHHHHhc-ceEEEEeecCC-hHHHHHHHHcCCCCCcEEEEEecCCCceEEEEecCC
Q 020843 184 LVNLQSTKEFSSHMLNRDTWANEAVSQTIST-NFIFWQVYDDT-SEGKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMV 261 (320)
Q Consensus 184 LV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~-nFV~~q~d~~s-~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~ 261 (320)
++.++.+||..|+.+. .+|++ +.-+..++++. ++.....+.|++..+|++.+ .|+. +.| .
T Consensus 3 i~~y~~~~C~~C~~~~----------~~l~~~~i~~~~~di~~~~~~~~~~~~~~~~~vP~l~~----~g~~---~~g-~ 64 (75)
T 1r7h_A 3 ITLYTKPACVQCTATK----------KALDRAGLAYNTVDISLDDEARDYVMALGYVQAPVVEV----DGEH---WSG-F 64 (75)
T ss_dssp EEEEECTTCHHHHHHH----------HHHHHTTCCCEEEETTTCHHHHHHHHHTTCBCCCEEEE----TTEE---EES-C
T ss_pred EEEEeCCCChHHHHHH----------HHHHHcCCCcEEEECCCCHHHHHHHHHcCCCccCEEEE----CCeE---EcC-C
Confidence 4567889999998763 33332 22233345543 34444446799999999873 3543 556 4
Q ss_pred ChHHHHHHH
Q 020843 262 QPESLLEDL 270 (320)
Q Consensus 262 ~~~~fl~~L 270 (320)
+++++.+.|
T Consensus 65 ~~~~l~~~l 73 (75)
T 1r7h_A 65 RPERIKQLQ 73 (75)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 566554443
No 289
>2dag_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5 (USP 5), UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.19 E-value=0.054 Score=40.24 Aligned_cols=42 Identities=12% Similarity=0.150 Sum_probs=37.7
Q ss_pred chHHHHHhhhccccCCCHHHHHHHHHHcC-CCHHHHHHHHhcCCC
Q 020843 9 DKQSMVSSFLEIAVGQTAETAVQFLQATS-WKLDEAIQLFYVGNE 52 (320)
Q Consensus 9 ~~~~~i~~F~~iTt~~~~~~A~~~Le~~~-wdLe~Av~~ff~~~~ 52 (320)
...+.|.+++++ |-+.+.|++.|.+++ ||+|.|++-.|+..+
T Consensus 8 ~~e~~v~~L~~M--GF~~~~a~~AL~~t~n~~ve~A~ewL~~~~~ 50 (74)
T 2dag_A 8 LDESVIIQLVEM--GFPMDACRKAVYYTGNSGAEAAMNWVMSHMD 50 (74)
T ss_dssp SCHHHHHHHHHH--SCCHHHHHHHHHHHTSCCHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHc--CCCHHHHHHHHHHhCCCCHHHHHHHHHhCCC
Confidence 357899999999 899999999999998 589999999998654
No 290
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=94.00 E-value=0.1 Score=37.09 Aligned_cols=44 Identities=16% Similarity=0.126 Sum_probs=38.6
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCCCC
Q 020843 10 KQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNES 53 (320)
Q Consensus 10 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~~~ 53 (320)
.++.|.++.++=-.-|.++.+..|++|++|+|.||+..++....
T Consensus 9 ~ee~l~~L~emFP~ld~~~I~~vL~a~~gdvd~aI~~LL~m~~~ 52 (59)
T 1wgl_A 9 SEEDLKAIQDMFPNMDQEVIRSVLEAQRGNKDAAINSLLQMGEE 52 (59)
T ss_dssp CHHHHHHHHHHCSSSCHHHHHHHHTTTTTCHHHHHHHHHHSSCC
T ss_pred CHHHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHcCcCC
Confidence 46788888887678899999999999999999999999987654
No 291
>1otr_A Protein CUE2; protein-protein complex, cell cycle; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.4
Probab=93.86 E-value=0.082 Score=36.20 Aligned_cols=42 Identities=19% Similarity=0.196 Sum_probs=36.7
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCC
Q 020843 10 KQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGN 51 (320)
Q Consensus 10 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~ 51 (320)
.++.+...+++=-..+..++++.|+.++||++.|++...+..
T Consensus 4 ~e~~v~~L~EMFP~~~~~~ik~~L~~~~Gd~d~Ai~~LL~~~ 45 (49)
T 1otr_A 4 HESKLSILMDMFPAISKSKLQVHLLENNNDLDLTIGLLLKEN 45 (49)
T ss_dssp HHHHHHHHHHHCSSSCHHHHHHHHHHTTTCSHHHHHHHHHHT
T ss_pred hHHHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHhcc
Confidence 467777778876888999999999999999999999988763
No 292
>2cp8_A NEXT to BRCA1 gene 1 protein; UBA domain, structural genomics, human, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=93.76 E-value=0.09 Score=36.72 Aligned_cols=41 Identities=5% Similarity=0.148 Sum_probs=36.7
Q ss_pred HHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCCC
Q 020843 11 QSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNE 52 (320)
Q Consensus 11 ~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 52 (320)
..++.++.++ +=.|.+.-++.|..++|||+.||..-+..+.
T Consensus 10 a~~L~~L~eM-GF~D~~~N~~aL~~~~gnv~~aI~~Ll~~~~ 50 (54)
T 2cp8_A 10 AALMAHLFEM-GFCDRQLNLRLLKKHNYNILQVVTELLQLSG 50 (54)
T ss_dssp HHHHHHHHHH-TCCCHHHHHHHHTTTTTCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHc-CCCcHHHHHHHHHHcCCCHHHHHHHHHhccC
Confidence 4489999999 8889999999999999999999999887544
No 293
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=93.53 E-value=0.33 Score=40.72 Aligned_cols=41 Identities=17% Similarity=0.176 Sum_probs=30.3
Q ss_pred HHHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 229 KKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 229 ~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
.++++.+++.++|+++ |+ |+.+ +.|. ++++|.+.|...+.+
T Consensus 145 ~~~a~~~gv~gtPt~v-in---g~~~--~~g~-~~~~l~~~i~~~~~~ 185 (193)
T 2rem_A 145 RAYALKVRPVGTPTIV-VN---GRYM--VTGH-DFEDTLRITDYLVSR 185 (193)
T ss_dssp HHHHHHHCCSSSSEEE-ET---TTEE--ECCS-SHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCeEE-EC---CEEE--ecCC-CHHHHHHHHHHHHHH
Confidence 3455678899999955 44 6544 4677 899999998888764
No 294
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=93.40 E-value=0.35 Score=35.04 Aligned_cols=74 Identities=8% Similarity=-0.021 Sum_probs=43.7
Q ss_pred EEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCCh--HHHHHHHHcCC-----CCCcEEEEEecCCCceEEE
Q 020843 184 LVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTS--EGKKVCTYYKL-----DSIPVVLVVDPITGQKMRS 256 (320)
Q Consensus 184 LV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~--eg~~~~~~Y~v-----~~~P~i~Iidp~tG~~v~~ 256 (320)
++.++.+||+.|+...+ +.+-+.-.|-...+|.... ....+...++. .++|.|.| + |+.+
T Consensus 6 v~ly~~~~Cp~C~~~~~-------~L~~~~i~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i-~---g~~i-- 72 (89)
T 3msz_A 6 VKIYTRNGCPYCVWAKQ-------WFEENNIAFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI-D---DEHI-- 72 (89)
T ss_dssp EEEEECTTCHHHHHHHH-------HHHHTTCCCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE-T---TEEE--
T ss_pred EEEEEcCCChhHHHHHH-------HHHHcCCCceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE-C---CEEE--
Confidence 56677899999987632 2222233465555555432 23567777877 89999964 3 6543
Q ss_pred EecCCChHHHHHHHHHHH
Q 020843 257 WCGMVQPESLLEDLVPFM 274 (320)
Q Consensus 257 ~~G~~~~~~fl~~L~~fl 274 (320)
.| .+++++.+.+.+
T Consensus 73 -~g---~~~i~~~~~~~~ 86 (89)
T 3msz_A 73 -GG---FTELKANADKIL 86 (89)
T ss_dssp -ES---HHHHHHTHHHHT
T ss_pred -eC---hHHHHHHHHHHh
Confidence 34 445555555444
No 295
>1jkg_B TAP; NTF2-like domain, transport protein; 1.90A {Homo sapiens} SCOP: d.17.4.2 PDB: 1jn5_B 1go5_A
Probab=93.36 E-value=0.014 Score=53.06 Aligned_cols=42 Identities=24% Similarity=0.366 Sum_probs=0.0
Q ss_pred chHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCC
Q 020843 9 DKQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGN 51 (320)
Q Consensus 9 ~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~ 51 (320)
.++++|.+|... ||-..+-++.+|+.++||++.|+..|-+--
T Consensus 197 ~q~~~v~~~~~~-T~mn~~~s~~cL~~~~Wd~~~A~~~F~~l~ 238 (250)
T 1jkg_B 197 EQQEMLQAFSTQ-SGMNLEWSQKCLQDNNWDYTRSAQAFTHLK 238 (250)
T ss_dssp -------------------------------------------
T ss_pred HHHHHHHHHHHH-hCCCHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 466899999999 999999999999999999999999997743
No 296
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=93.31 E-value=0.23 Score=39.24 Aligned_cols=77 Identities=10% Similarity=0.149 Sum_probs=46.4
Q ss_pred ccccccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc------ceEEEEeecCCh--H-HHHHHH
Q 020843 163 LMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST------NFIFWQVYDDTS--E-GKKVCT 233 (320)
Q Consensus 163 ~~~~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~------nFV~~q~d~~s~--e-g~~~~~ 233 (320)
.|......+.++...+.++ ++.|..+||+.|+.+ ++.+|++ .|..+-++.+.. + -..+.+
T Consensus 8 ~~~~~~~~~~~~~~i~~~~--Vvvf~~~~Cp~C~~a---------lk~~L~~~~~~~i~~~~vdid~~~~~~~~~~~l~~ 76 (118)
T 3c1r_A 8 HMVSQETIKHVKDLIAENE--IFVASKTYCPYCHAA---------LNTLFEKLKVPRSKVLVLQLNDMKEGADIQAALYE 76 (118)
T ss_dssp CCSCHHHHHHHHHHHHHSS--EEEEECSSCHHHHHH---------HHHHHTTSCCCGGGEEEEEGGGSTTHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHccCc--EEEEEcCCCcCHHHH---------HHHHHHHcCCCCCCeEEEECccCCChHHHHHHHHH
Confidence 3445556666666666666 344778999999876 2444443 244444433321 1 245777
Q ss_pred HcCCCCCcEEEEEecCCCceE
Q 020843 234 YYKLDSIPVVLVVDPITGQKM 254 (320)
Q Consensus 234 ~Y~v~~~P~i~Iidp~tG~~v 254 (320)
.|++.++|.|+ ++ |+.+
T Consensus 77 ~~g~~tvP~vf-i~---g~~i 93 (118)
T 3c1r_A 77 INGQRTVPNIY-IN---GKHI 93 (118)
T ss_dssp HHSCCSSCEEE-ET---TEEE
T ss_pred HhCCCCcCEEE-EC---CEEE
Confidence 89999999884 44 6554
No 297
>1vdl_A Ubiquitin carboxyl-terminal hydrolase 25; UBA domain, mouse cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.5.2.1
Probab=93.28 E-value=0.39 Score=35.58 Aligned_cols=43 Identities=21% Similarity=0.240 Sum_probs=38.2
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCCC
Q 020843 10 KQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNE 52 (320)
Q Consensus 10 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 52 (320)
.+-++.|..+||+..|...=.+-|+++++||..||...-+...
T Consensus 24 ~q~lLnQLrEITGiqD~~~L~~ALkas~Gdl~~AV~~LT~~~~ 66 (80)
T 1vdl_A 24 QQTFLNQLREITGINDAQILQQALKDSNGNLELAVAFLTAKNA 66 (80)
T ss_dssp HHHHHHHHHHHSCCCCHHHHHHHHHHHTSCHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHhccCCHHHHHHHHhcccc
Confidence 4558999999988899999999999999999999999877643
No 298
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=93.02 E-value=0.28 Score=35.08 Aligned_cols=76 Identities=11% Similarity=0.163 Sum_probs=44.2
Q ss_pred EEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCCceEEEEecCCCh
Q 020843 184 LVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQP 263 (320)
Q Consensus 184 LV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~ 263 (320)
++.++.+||+.|+.+.. +.+-..-.|..+-++.+......+.+.+++.++|++. + .|+.+ .|+
T Consensus 3 i~~y~~~~C~~C~~~~~-------~l~~~~i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~-~---~g~~i---~g~--- 65 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKA-------LLSSKGVSFQELPIDGNAAKREEMIKRSGRTTVPQIF-I---DAQHI---GGY--- 65 (82)
T ss_dssp EEEEECSSCHHHHHHHH-------HHHHHTCCCEEEECTTCSHHHHHHHHHHSSCCSCEEE-E---TTEEE---ESH---
T ss_pred EEEEECCCChhHHHHHH-------HHHHCCCCcEEEECCCCHHHHHHHHHHhCCCCcCEEE-E---CCEEE---eCH---
Confidence 34567899999987632 1111233455555544333445678889999999985 3 36543 342
Q ss_pred HHHHHHHHHHHhcCCCc
Q 020843 264 ESLLEDLVPFMDGGPRE 280 (320)
Q Consensus 264 ~~fl~~L~~fld~~~~d 280 (320)
..|.++++.+.++
T Consensus 66 ----~~i~~~~~~g~l~ 78 (82)
T 1fov_A 66 ----DDLYALDARGGLD 78 (82)
T ss_dssp ----HHHHHHHHTTCSH
T ss_pred ----HHHHHHHHCCCHH
Confidence 2345555655554
No 299
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=92.93 E-value=0.38 Score=36.87 Aligned_cols=69 Identities=10% Similarity=0.224 Sum_probs=39.6
Q ss_pred HHHHHHHhcCCeEEEEEe----CCCCcchhhhhhccCCCHHHHHHHhc---ceEEEEeecCChHHHHHHHHcCCCCCcEE
Q 020843 171 KAKDAASVQDKWLLVNLQ----STKEFSSHMLNRDTWANEAVSQTIST---NFIFWQVYDDTSEGKKVCTYYKLDSIPVV 243 (320)
Q Consensus 171 ~A~~~Ak~~~K~LLV~l~----~~~~f~c~~lnRdvw~n~~V~~~l~~---nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i 243 (320)
+-++...+.++ |+||.. .+||+.|+.+. .+|++ .|..+-++.+......+...++..++|.|
T Consensus 8 ~~~~~~i~~~~-vvvf~~g~~~~~~C~~C~~~~----------~~L~~~~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~v 76 (105)
T 2yan_A 8 ERLKVLTNKAS-VMLFMKGNKQEAKCGFSKQIL----------EILNSTGVEYETFDILEDEEVRQGLKAYSNWPTYPQL 76 (105)
T ss_dssp HHHHHHHTSSS-EEEEESBCSSSBCTTHHHHHH----------HHHHHHTCCCEEEEGGGCHHHHHHHHHHHTCCSSCEE
T ss_pred HHHHHHhccCC-EEEEEecCCCCCCCccHHHHH----------HHHHHCCCCeEEEECCCCHHHHHHHHHHHCCCCCCeE
Confidence 33444445555 556444 28999998763 33332 35444443332223456777888999998
Q ss_pred EEEecCCCceE
Q 020843 244 LVVDPITGQKM 254 (320)
Q Consensus 244 ~Iidp~tG~~v 254 (320)
+ ++ |+.+
T Consensus 77 ~-i~---g~~i 83 (105)
T 2yan_A 77 Y-VK---GELV 83 (105)
T ss_dssp E-ET---TEEE
T ss_pred E-EC---CEEE
Confidence 4 43 6554
No 300
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=92.86 E-value=0.29 Score=35.09 Aligned_cols=65 Identities=17% Similarity=0.364 Sum_probs=39.4
Q ss_pred EEEEeCCCCcchhhhhhccCCCHHHHHHHhc-ceEEEEeecCC-hHHHHHHHHcCCCCCcEEEEEecCCCceEEEEecCC
Q 020843 184 LVNLQSTKEFSSHMLNRDTWANEAVSQTIST-NFIFWQVYDDT-SEGKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMV 261 (320)
Q Consensus 184 LV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~-nFV~~q~d~~s-~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~ 261 (320)
++.|+.+||+.|+.+. .+|++ +.-+..+|++. ++..+....|++.++|++ +++ |+. +.| .
T Consensus 3 v~~f~~~~C~~C~~~~----------~~l~~~~i~~~~vdi~~~~~~~~~~~~~g~~~vP~~-~~~---g~~---~~g-~ 64 (81)
T 1h75_A 3 ITIYTRNDCVQCHATK----------RAMENRGFDFEMINVDRVPEAAEALRAQGFRQLPVV-IAG---DLS---WSG-F 64 (81)
T ss_dssp EEEEECTTCHHHHHHH----------HHHHHTTCCCEEEETTTCHHHHHHHHHTTCCSSCEE-EET---TEE---EES-C
T ss_pred EEEEcCCCChhHHHHH----------HHHHHCCCCeEEEECCCCHHHHHHHHHhCCCccCEE-EEC---CEE---Eec-C
Confidence 4667889999998763 33332 22234456553 455555556899999998 443 543 445 4
Q ss_pred ChHHH
Q 020843 262 QPESL 266 (320)
Q Consensus 262 ~~~~f 266 (320)
+++++
T Consensus 65 ~~~~l 69 (81)
T 1h75_A 65 RPDMI 69 (81)
T ss_dssp CHHHH
T ss_pred CHHHH
Confidence 55543
No 301
>1vek_A UBP14, ubiquitin-specific protease 14, putative; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.5.2.1
Probab=92.50 E-value=0.16 Score=38.64 Aligned_cols=41 Identities=12% Similarity=0.207 Sum_probs=37.1
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHc-CCCHHHHHHHHhcCCC
Q 020843 10 KQSMVSSFLEIAVGQTAETAVQFLQAT-SWKLDEAIQLFYVGNE 52 (320)
Q Consensus 10 ~~~~i~~F~~iTt~~~~~~A~~~Le~~-~wdLe~Av~~ff~~~~ 52 (320)
..++|.+++++ |-+.+.|++.|..+ |||++.|++-.|+..+
T Consensus 29 ~e~~v~~L~~M--GF~~~~a~~AL~~t~n~n~e~A~ewL~~h~~ 70 (84)
T 1vek_A 29 NEEIVAQLVSM--GFSQLHCQKAAINTSNAGVEEAMNWLLSHMD 70 (84)
T ss_dssp CHHHHHHHHHH--TCCHHHHHHHHHHTTTCCHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHc--CCCHHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 57899999999 99999999999988 5999999999998654
No 302
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=92.27 E-value=0.28 Score=36.08 Aligned_cols=52 Identities=6% Similarity=0.080 Sum_probs=33.1
Q ss_pred EEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHc-CCCCCcEEE
Q 020843 184 LVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYY-KLDSIPVVL 244 (320)
Q Consensus 184 LV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y-~v~~~P~i~ 244 (320)
++.++.+||+.|+.+.+ +.+-+.-.|. .++++......+.+.+ ++.++|++.
T Consensus 8 v~~y~~~~C~~C~~~~~-------~L~~~~i~~~--~vdv~~~~~~~l~~~~~~~~~vP~l~ 60 (89)
T 2klx_A 8 IILYTRPNCPYCKRARD-------LLDKKGVKYT--DIDASTSLRQEMVQRANGRNTFPQIF 60 (89)
T ss_dssp EEEESCSCCTTTHHHHH-------HHHHHTCCEE--EECSCHHHHHHHHHHHHSSCCSCEEE
T ss_pred EEEEECCCChhHHHHHH-------HHHHcCCCcE--EEECCHHHHHHHHHHhCCCCCcCEEE
Confidence 55678899999987632 1112222444 4455523346688888 999999985
No 303
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=92.24 E-value=0.64 Score=38.38 Aligned_cols=36 Identities=11% Similarity=0.122 Sum_probs=25.8
Q ss_pred HHHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHH
Q 020843 229 KKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLV 271 (320)
Q Consensus 229 ~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~ 271 (320)
.++++.+++.++|+++| + |+. +.|..+++.|.+.|.
T Consensus 139 ~~~a~~~gv~gtPt~vv-n---g~~---~~G~~~~~~l~~~i~ 174 (175)
T 1z6m_A 139 IAEANAAHIQFVPTIII-G---EYI---FDESVTEEELRGYIE 174 (175)
T ss_dssp HHHHHHHTCCSSCEEEE-T---TEE---ECTTCCHHHHHHHHT
T ss_pred HHHHHHcCCCCcCeEEE-C---CEE---ccCCCCHHHHHHHhc
Confidence 44566788999999654 4 653 578888887776653
No 304
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=91.85 E-value=0.33 Score=35.82 Aligned_cols=51 Identities=4% Similarity=-0.034 Sum_probs=32.6
Q ss_pred EEEEeCCCCcchhhhhhccCCCHHHHHHHhc---ceEEEEeecCChHHHHHHHHcCCCCCcEEE
Q 020843 184 LVNLQSTKEFSSHMLNRDTWANEAVSQTIST---NFIFWQVYDDTSEGKKVCTYYKLDSIPVVL 244 (320)
Q Consensus 184 LV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~---nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~ 244 (320)
++.|+.+||..|+.+ +.+|++ .|..+-++.+......+.+.+++.++|++.
T Consensus 8 v~ly~~~~C~~C~~~----------~~~L~~~~i~~~~~di~~~~~~~~~l~~~~~~~~vP~l~ 61 (92)
T 2khp_A 8 VIIYTRPGCPYCARA----------KALLARKGAEFNEIDASATPELRAEMQERSGRNTFPQIF 61 (92)
T ss_dssp EEEEECTTCHHHHHH----------HHHHHHTTCCCEEEESTTSHHHHHHHHHHHTSSCCCEEE
T ss_pred EEEEECCCChhHHHH----------HHHHHHcCCCcEEEECCCCHHHHHHHHHHhCCCCcCEEE
Confidence 456778999999865 444443 354444433223345677788999999763
No 305
>2lbc_A Ubiquitin carboxyl-terminal hydrolase 13; tandem UBA of USP13; NMR {Homo sapiens}
Probab=91.45 E-value=0.24 Score=40.05 Aligned_cols=42 Identities=24% Similarity=0.365 Sum_probs=38.0
Q ss_pred chHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCCC
Q 020843 9 DKQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNE 52 (320)
Q Consensus 9 ~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 52 (320)
...+.|.+++++ |-+.+.|++.|.+++||++.|++-.|...+
T Consensus 77 ~~e~~v~~L~~M--GF~~~~a~~AL~~~~~~~e~A~e~L~~~~~ 118 (126)
T 2lbc_A 77 PPEEIVAIITSM--GFQRNQAIQALRATNNNLERALDWIFSHPE 118 (126)
T ss_dssp CCHHHHHHHHHH--TSCHHHHHHHHHHHTSCHHHHHHHHHTCCS
T ss_pred cCHHHHHHHHHc--CCCHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 357899999999 899999999999999999999999998654
No 306
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=90.95 E-value=1.1 Score=34.05 Aligned_cols=73 Identities=10% Similarity=0.102 Sum_probs=42.5
Q ss_pred EEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCCh-HHHHH----HHHcCCCCCcEEEEEecCCCceEEEEe
Q 020843 184 LVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTS-EGKKV----CTYYKLDSIPVVLVVDPITGQKMRSWC 258 (320)
Q Consensus 184 LV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~-eg~~~----~~~Y~v~~~P~i~Iidp~tG~~v~~~~ 258 (320)
++.++.+||+.|+... .+.+-+.-.|-...++..+. +..++ .+.++..++|+|.| + .|+. +
T Consensus 24 v~ly~~~~Cp~C~~ak-------~~L~~~~i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i-~--~~~~---i- 89 (103)
T 3nzn_A 24 VIMYGLSTCVWCKKTK-------KLLTDLGVDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII-N--DEKA---I- 89 (103)
T ss_dssp EEEEECSSCHHHHHHH-------HHHHHHTBCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE-T--TTEE---E-
T ss_pred EEEEcCCCCchHHHHH-------HHHHHcCCCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE-C--CCEE---E-
Confidence 4446789999998773 22233344566666665332 23333 34578899999876 2 1222 3
Q ss_pred cCCChHHHHHHH
Q 020843 259 GMVQPESLLEDL 270 (320)
Q Consensus 259 G~~~~~~fl~~L 270 (320)
|-.+++++.+.|
T Consensus 90 gg~~~~~l~~~L 101 (103)
T 3nzn_A 90 VGFKEKEIRESL 101 (103)
T ss_dssp ESCCHHHHHHHT
T ss_pred EcCCHHHHHHHh
Confidence 446777665544
No 307
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=90.64 E-value=1.4 Score=38.47 Aligned_cols=95 Identities=8% Similarity=0.112 Sum_probs=53.7
Q ss_pred CCccccccccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCC
Q 020843 159 PPFHLMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLD 238 (320)
Q Consensus 159 Ppf~~~~~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~ 238 (320)
|++......++++-+. ....+++.+.|.+..+..+..+ +.++.....|.+..-.++. ..++++|++.
T Consensus 138 p~l~~~~~~~l~~~~~--~~~~~~~al~f~~~~~~~~~~~---------~~d~~~~~~i~v~~~~~~~--~~l~~~f~v~ 204 (244)
T 3q6o_A 138 PPLEPAXLEEIDGFFA--RNNEEYLALIFEXGGSYLAREV---------ALDLSQHKGVAVRRVLNTE--ANVVRKFGVT 204 (244)
T ss_dssp CCCSCCCHHHHHTHHH--HCCCSEEEEEEECTTCCHHHHH---------HHHTTTCTTEEEEEEETTC--HHHHHHHTCC
T ss_pred CCcccccHHHHHHHhh--cCCCceEEEEEEECCcchHHHH---------HHHhccCCceEEEEEeCch--HHHHHHcCCC
Confidence 4444433334444443 3777899888887754433332 3334433334443333322 4688899999
Q ss_pred CCcEEEEEecCCCceEEEEecCCChHHHHH
Q 020843 239 SIPVVLVVDPITGQKMRSWCGMVQPESLLE 268 (320)
Q Consensus 239 ~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~ 268 (320)
.+|+++++++ +|+.. ......+..+|+.
T Consensus 205 ~~Pslvl~~~-~g~~~-~~~~~~~~r~~~~ 232 (244)
T 3q6o_A 205 DFPSCYLLFR-NGSVS-RVPVLMESRSFYT 232 (244)
T ss_dssp CSSEEEEEET-TSCEE-ECCCSSSSHHHHH
T ss_pred CCCeEEEEeC-CCCeE-eeccccccHHHHH
Confidence 9999999997 56544 3333344434443
No 308
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=90.24 E-value=0.84 Score=35.21 Aligned_cols=62 Identities=11% Similarity=0.125 Sum_probs=36.4
Q ss_pred hcCCeEEEEEeC----CCCcchhhhhhccCCCHHHHHHHhc-ceEEEEeecCC-hH-HHHHHHHcCCCCCcEEEEEecCC
Q 020843 178 VQDKWLLVNLQS----TKEFSSHMLNRDTWANEAVSQTIST-NFIFWQVYDDT-SE-GKKVCTYYKLDSIPVVLVVDPIT 250 (320)
Q Consensus 178 ~~~K~LLV~l~~----~~~f~c~~lnRdvw~n~~V~~~l~~-nFV~~q~d~~s-~e-g~~~~~~Y~v~~~P~i~Iidp~t 250 (320)
+.+| |+||... +||+.|+.. +.+|++ +.-+-.+|++. ++ -..+...++..++|.|+ |+
T Consensus 13 ~~~~-vvvy~~g~~~~~~Cp~C~~a----------k~~L~~~~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~if-i~--- 77 (109)
T 1wik_A 13 NKAS-VMLFMKGNKQEAKCGFSKQI----------LEILNSTGVEYETFDILEDEEVRQGLKTFSNWPTYPQLY-VR--- 77 (109)
T ss_dssp TTSS-EEEEESSTTTCCCSSTHHHH----------HHHHHHTCSCEEEEESSSCHHHHHHHHHHHSCCSSCEEE-CS---
T ss_pred ccCC-EEEEEecCCCCCCCchHHHH----------HHHHHHcCCCeEEEECCCCHHHHHHHHHHhCCCCCCEEE-EC---
Confidence 4455 5565554 899999765 444443 22234445443 33 34566677888999864 33
Q ss_pred CceE
Q 020843 251 GQKM 254 (320)
Q Consensus 251 G~~v 254 (320)
|+.+
T Consensus 78 g~~i 81 (109)
T 1wik_A 78 GDLV 81 (109)
T ss_dssp SSEE
T ss_pred CEEE
Confidence 6543
No 309
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=90.20 E-value=1.9 Score=35.39 Aligned_cols=64 Identities=16% Similarity=0.271 Sum_probs=45.0
Q ss_pred HhcceEEEEeecCChHHHHHHHHcCCCC--CcEEEEEec-CCCceEEEEe-cCCChHHHHHHHHHHHhc
Q 020843 212 ISTNFIFWQVYDDTSEGKKVCTYYKLDS--IPVVLVVDP-ITGQKMRSWC-GMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 212 l~~nFV~~q~d~~s~eg~~~~~~Y~v~~--~P~i~Iidp-~tG~~v~~~~-G~~~~~~fl~~L~~fld~ 276 (320)
.+..++|+-+|.+..+..+.+..|++.. +|.|+|++. ..+.+- ... +.++++.+.+-++.|++-
T Consensus 61 fkgki~Fv~vd~~~~~~~~~l~~fGl~~~~~P~v~i~~~~~~~~Ky-~~~~~~~t~~~i~~Fv~d~l~G 128 (147)
T 3bj5_A 61 FKGKILFAFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKY-KPESEELTAERITEFCHRFLEG 128 (147)
T ss_dssp TTTTCEEEEECTTCGGGHHHHHHTTCCGGGCSEEEEEECSSSCEEE-CCSCCCCCHHHHHHHHHHHHTT
T ss_pred cCCceEEEEEecchHhHHHHHHHcCCCcccCCEEEEEecccccccC-CCCcccCCHHHHHHHHHHHHcC
Confidence 3456888888876556556888999964 999999995 334332 222 677888877777777764
No 310
>2crn_A Ubash3A protein; compact three-helix bundle, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=89.98 E-value=0.28 Score=35.28 Aligned_cols=42 Identities=24% Similarity=0.306 Sum_probs=36.8
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCC-CHHHHHHHHhcCCCC
Q 020843 10 KQSMVSSFLEIAVGQTAETAVQFLQATSW-KLDEAIQLFYVGNES 53 (320)
Q Consensus 10 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~w-dLe~Av~~ff~~~~~ 53 (320)
..+.|.+.+++ |=+.+.|++.|..+++ |+|.|++-.|+..+.
T Consensus 9 ~e~~v~~L~~M--GF~~~~a~~AL~~t~n~~~e~A~~wL~~h~~d 51 (64)
T 2crn_A 9 SPSLLEPLLAM--GFPVHTALKALAATGRKTAEEALAWLHDHCND 51 (64)
T ss_dssp SCSSHHHHHHT--SCCHHHHHHHHHHHTSCCHHHHHHHHHHHSSS
T ss_pred CHHHHHHHHHc--CCCHHHHHHHHHHhCCCCHHHHHHHHHhCCCC
Confidence 45689999998 9999999999999976 999999999987553
No 311
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=89.80 E-value=1.2 Score=34.69 Aligned_cols=88 Identities=8% Similarity=0.071 Sum_probs=50.5
Q ss_pred HHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc---ceEEEEeecCC--hHH-HHHHHHcCCCCCcE
Q 020843 169 FEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST---NFIFWQVYDDT--SEG-KKVCTYYKLDSIPV 242 (320)
Q Consensus 169 f~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~---nFV~~q~d~~s--~eg-~~~~~~Y~v~~~P~ 242 (320)
..+.++...+.++.++ +..+||+.|+.. +.+|++ .|-.+.++... .+- ..+.+.++..++|.
T Consensus 6 ~~~~~~~~i~~~~v~v--y~~~~Cp~C~~a----------k~~L~~~~i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~ 73 (114)
T 3h8q_A 6 LRRHLVGLIERSRVVI--FSKSYCPHSTRV----------KELFSSLGVECNVLELDQVDDGARVQEVLSEITNQKTVPN 73 (114)
T ss_dssp HHHHHHHHHHHCSEEE--EECTTCHHHHHH----------HHHHHHTTCCCEEEETTTSTTHHHHHHHHHHHHSCCSSCE
T ss_pred HHHHHHHHhccCCEEE--EEcCCCCcHHHH----------HHHHHHcCCCcEEEEecCCCChHHHHHHHHHHhCCCccCE
Confidence 4455566666777443 777999999765 444543 45444444322 222 33556778889999
Q ss_pred EEEEecCCCceEEEEecCCChHHHHH--HHHHHHh
Q 020843 243 VLVVDPITGQKMRSWCGMVQPESLLE--DLVPFMD 275 (320)
Q Consensus 243 i~Iidp~tG~~v~~~~G~~~~~~fl~--~L~~fld 275 (320)
|.| .|+.+ -|+-+..++.+ .|.+.|.
T Consensus 74 vfi----~g~~i---gG~d~l~~l~~~G~L~~~l~ 101 (114)
T 3h8q_A 74 IFV----NKVHV---GGCDQTFQAYQSGLLQKLLQ 101 (114)
T ss_dssp EEE----TTEEE---ESHHHHHHHHHHTHHHHHHH
T ss_pred EEE----CCEEE---eCHHHHHHHHHCCCHHHHhc
Confidence 975 46544 35433333332 4555555
No 312
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=89.63 E-value=0.71 Score=37.12 Aligned_cols=72 Identities=10% Similarity=0.068 Sum_probs=43.5
Q ss_pred cHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc------ceEEEEeecCCh--H-HHHHHHHcCCC
Q 020843 168 SFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST------NFIFWQVYDDTS--E-GKKVCTYYKLD 238 (320)
Q Consensus 168 sf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~------nFV~~q~d~~s~--e-g~~~~~~Y~v~ 238 (320)
...+.++...+.++ +|.+..+||+.|... ++.+|++ .|..+.++.+.. + -..+...++..
T Consensus 25 ~~~~~v~~~i~~~~--Vvvy~~~~Cp~C~~a---------~k~~L~~~~~~~i~~~~vdvd~~~~~~~~~~~L~~~~g~~ 93 (129)
T 3ctg_A 25 ETVAHVKDLIGQKE--VFVAAKTYCPYCKAT---------LSTLFQELNVPKSKALVLELDEMSNGSEIQDALEEISGQK 93 (129)
T ss_dssp HHHHHHHHHHHHSS--EEEEECTTCHHHHHH---------HHHHHTTSCCCGGGEEEEEGGGSTTHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHcCCC--EEEEECCCCCchHHH---------HHHHHHhcCccCCCcEEEEccccCCHHHHHHHHHHHhCCC
Confidence 34455555555666 345577999999766 2444443 355555554431 2 24577788999
Q ss_pred CCcEEEEEecCCCceE
Q 020843 239 SIPVVLVVDPITGQKM 254 (320)
Q Consensus 239 ~~P~i~Iidp~tG~~v 254 (320)
++|.|. |+ |+.+
T Consensus 94 tVP~vf-i~---g~~i 105 (129)
T 3ctg_A 94 TVPNVY-IN---GKHI 105 (129)
T ss_dssp SSCEEE-ET---TEEE
T ss_pred CCCEEE-EC---CEEE
Confidence 999974 44 5544
No 313
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=89.40 E-value=0.9 Score=34.70 Aligned_cols=60 Identities=10% Similarity=0.074 Sum_probs=35.0
Q ss_pred EEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHc-CCCCCcEEEEEecCCCceE
Q 020843 184 LVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYY-KLDSIPVVLVVDPITGQKM 254 (320)
Q Consensus 184 LV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y-~v~~~P~i~Iidp~tG~~v 254 (320)
++.+..+||+.|+...+ +.+-++-.|..+-++.+......+...+ +..++|.|. |+ |+.+
T Consensus 18 v~vy~~~~Cp~C~~ak~-------~L~~~~i~y~~idI~~~~~~~~~l~~~~~g~~~vP~if-i~---g~~i 78 (99)
T 3qmx_A 18 IEIYTWSTCPFCMRALA-------LLKRKGVEFQEYCIDGDNEAREAMAARANGKRSLPQIF-ID---DQHI 78 (99)
T ss_dssp EEEEECTTCHHHHHHHH-------HHHHHTCCCEEEECTTCHHHHHHHHHHTTTCCCSCEEE-ET---TEEE
T ss_pred EEEEEcCCChhHHHHHH-------HHHHCCCCCEEEEcCCCHHHHHHHHHHhCCCCCCCEEE-EC---CEEE
Confidence 44567789999977731 2222233455544444333334566666 888999884 44 6543
No 314
>4ae4_A Ubiquitin-associated protein 1; protein transport, endosomal sorting, tetherin, VPU, HIV-1, monoubiquitin; HET: NHE; 1.65A {Homo sapiens} PDB: 4ae4_B*
Probab=89.14 E-value=0.4 Score=38.64 Aligned_cols=38 Identities=18% Similarity=0.241 Sum_probs=35.2
Q ss_pred HHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCC
Q 020843 12 SMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGN 51 (320)
Q Consensus 12 ~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~ 51 (320)
+.|.+|+++ |=+.+.|+.-|..+++|++.|++..|...
T Consensus 78 ~~v~~L~eM--GF~~~~a~~AL~~~~nd~erAlewL~~~~ 115 (118)
T 4ae4_A 78 QLMSKFKEM--GFELKDIKEVLLLHNNDQDNALEDLMARA 115 (118)
T ss_dssp HHHHHHHHT--TCCHHHHHHHHHHTTTCHHHHHHHHHHHC
T ss_pred HHHHHHHHc--CCCHHHHHHHHHHcCCCHHHHHHHHHHhc
Confidence 569999999 99999999999999999999999988754
No 315
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=88.55 E-value=2.4 Score=32.11 Aligned_cols=74 Identities=14% Similarity=0.131 Sum_probs=46.8
Q ss_pred EEEeCCCCcchhhhhhccCCCHHHHHHHhcceE-EEEeecC-ChHHHHHHHHc--CCCCCcEEEEEecCCCceEEEEecC
Q 020843 185 VNLQSTKEFSSHMLNRDTWANEAVSQTISTNFI-FWQVYDD-TSEGKKVCTYY--KLDSIPVVLVVDPITGQKMRSWCGM 260 (320)
Q Consensus 185 V~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV-~~q~d~~-s~eg~~~~~~Y--~v~~~P~i~Iidp~tG~~v~~~~G~ 260 (320)
+-+..+||+.|... +++|+++=| |-.+|++ ++++.+..... +..++|.|+|-| |..+ .|
T Consensus 7 ~vYs~~~Cp~C~~a----------K~~L~~~gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~i~D---g~~l---~~- 69 (92)
T 2lqo_A 7 TIYTTSWCGYCLRL----------KTALTANRIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVKFAD---GSTL---TN- 69 (92)
T ss_dssp EEEECTTCSSHHHH----------HHHHHHTTCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEEETT---SCEE---ES-
T ss_pred EEEcCCCCHhHHHH----------HHHHHhcCCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEEEeC---CEEE---eC-
Confidence 44556899999655 667776533 3345654 35555544432 567899998755 4432 34
Q ss_pred CChHHHHHHHHHHHh
Q 020843 261 VQPESLLEDLVPFMD 275 (320)
Q Consensus 261 ~~~~~fl~~L~~fld 275 (320)
.+++++.+.|.+...
T Consensus 70 ~~~~el~~~L~el~g 84 (92)
T 2lqo_A 70 PSADEVKAKLVKIAG 84 (92)
T ss_dssp CCHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHhcC
Confidence 578888888887753
No 316
>2dhy_A CUE domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.02 E-value=0.63 Score=33.83 Aligned_cols=43 Identities=16% Similarity=0.135 Sum_probs=38.0
Q ss_pred chHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCC
Q 020843 9 DKQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGN 51 (320)
Q Consensus 9 ~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~ 51 (320)
+.++.+.++.++=-.-|.++-+..|++++||++.||+..+...
T Consensus 17 ~~~~~v~~L~~MFP~lD~~vI~~vL~a~~G~vd~aId~LL~ms 59 (67)
T 2dhy_A 17 EFNQAMDDFKTMFPNMDYDIIECVLRANSGAVDATIDQLLQMN 59 (67)
T ss_dssp CSHHHHHHHHHHCSSSCHHHHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Confidence 4578888888887788999999999999999999999998754
No 317
>2lva_A Ubiquitin carboxyl-terminal hydrolase 28; UIM, ubiquitin interacting motif, UBA domain, NESG, northeas structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=86.39 E-value=0.14 Score=41.58 Aligned_cols=43 Identities=19% Similarity=0.150 Sum_probs=37.5
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCCC
Q 020843 10 KQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNE 52 (320)
Q Consensus 10 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 52 (320)
.+-+|.|+.+||+..|...=.+.|+++++||..||.++-+...
T Consensus 18 ~Q~lLNQLrEITGIqD~~~L~~ALkAsnGdl~qAV~~LT~~~~ 60 (129)
T 2lva_A 18 GQMLLNQLREITGIQDPSFLHEALKASNGDITQAVSLLTDERV 60 (129)
Confidence 3558999999977788999999999999999999999977643
No 318
>2juj_A E3 ubiquitin-protein ligase CBL; alpha helix, UBA domain, calcium, cytoplasm, metal- binding, phosphorylation, proto-oncogene, SH2 domain; NMR {Homo sapiens}
Probab=86.15 E-value=0.94 Score=31.52 Aligned_cols=41 Identities=10% Similarity=0.055 Sum_probs=37.2
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCCC
Q 020843 10 KQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNE 52 (320)
Q Consensus 10 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 52 (320)
-++.|++.|++ |-|.+.|++-|..++.|++.|.+...+-..
T Consensus 7 ~e~~Ia~L~sm--Gfsr~da~~AL~ia~Ndv~~AtNiLlEf~~ 47 (56)
T 2juj_A 7 LSSEIENLMSQ--GYSYQDIQKALVIAQNNIEMAKNILREFVS 47 (56)
T ss_dssp HHHHHHHHHTT--TCCHHHHHHHHHHTTTCSHHHHHHHHHSCC
T ss_pred ChHHHHHHHHc--CCCHHHHHHHHHHhcccHHHHHHHHHHHHc
Confidence 57899999999 999999999999999999999998877543
No 319
>1tr8_A Conserved protein (MTH177); chaperones, nascent polypeptide-associated complex, ribosome domain, ubiquitin, chaperone; 2.27A {Methanothermobacter marburgensis}
Probab=85.76 E-value=0.76 Score=36.12 Aligned_cols=35 Identities=29% Similarity=0.316 Sum_probs=31.0
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHH
Q 020843 10 KQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQ 45 (320)
Q Consensus 10 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~ 45 (320)
..+.|.-.|+- +|++.+.|++-|+.|+|||-.||-
T Consensus 65 ~~edi~lv~~q-~~vs~~~A~~aL~~~~gDiv~Ai~ 99 (102)
T 1tr8_A 65 PEDDIELVMNQ-TGASREDATRALQETGGDLAEAIM 99 (102)
T ss_dssp CHHHHHHHHHH-HCCCHHHHHHHHHHTTTCHHHHHH
T ss_pred CHHHHHHHHHH-hCCCHHHHHHHHHHcCCCHHHHHH
Confidence 35678888888 899999999999999999988874
No 320
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=85.53 E-value=7.2 Score=35.88 Aligned_cols=119 Identities=10% Similarity=0.071 Sum_probs=70.7
Q ss_pred hHHhhhhhcCCCccccccccHHHHHHHHHhc-CCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc--ceEEEEeecCC
Q 020843 149 SRDNLASLYRPPFHLMFNGSFEKAKDAASVQ-DKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST--NFIFWQVYDDT 225 (320)
Q Consensus 149 ~~~~l~~lf~Ppf~~~~~gsf~~A~~~Ak~~-~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~--nFV~~q~d~~s 225 (320)
-.+.+...-.|.+..+...++.+.. ... .+..++.|..++|..|..+-. .| ..|.+-.+. .+.|.-+|.+.
T Consensus 216 l~~fi~~~~~p~v~elt~~~~~~~~---~~~~~~~~~l~f~~~~~~~~~~~~~-~~--~~vA~~~~~~~~~~f~~id~~~ 289 (350)
T 1sji_A 216 LVEFVKEHQRPTLRRLRPEDMFETW---EDDLNGIHIVAFAERSDPDGYEFLE-IL--KQVARDNTDNPDLSIVWIDPDD 289 (350)
T ss_dssp HHHHHHHHCCCSEEECCTTTHHHHH---HSCSSSEEEEEECCTTSHHHHHHHH-HH--HHHHHHGGGCSSCCEEEECGGG
T ss_pred HHHHHHHcCccchhhcChhhHHHHh---cCCCCCcEEEEEEcCCCccHHHHHH-HH--HHHHHHhCCCCceEEEEECchh
Confidence 3445555556666665566666542 222 243344477777777765532 22 234444543 56677777553
Q ss_pred hHHHHHH----HHcCCC-CCcEEEEEecCCCceEEE-Ee---cCCChHHHHHHHHHHHh
Q 020843 226 SEGKKVC----TYYKLD-SIPVVLVVDPITGQKMRS-WC---GMVQPESLLEDLVPFMD 275 (320)
Q Consensus 226 ~eg~~~~----~~Y~v~-~~P~i~Iidp~tG~~v~~-~~---G~~~~~~fl~~L~~fld 275 (320)
- + .++ +.|++. .+|.|+|+++.+|.+.+. .. |..+++.+.+-|..+++
T Consensus 290 ~-~-~~~~~~~~~~gi~~~~P~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~F~~d~~~ 346 (350)
T 1sji_A 290 F-P-LLVAYWEKTFKIDLFKPQIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIEDVLS 346 (350)
T ss_dssp C-H-HHHHHHHHHCCSCTTSCEEEEEESSSSCEEESCSSCCSCCCCHHHHHHHHHHHHT
T ss_pred h-H-HHHHHHHhhcCCCccCCcEEEEecccccccccCCCcccccCCHHHHHHHHHHHhc
Confidence 2 2 344 678886 589999999876644331 22 46788887777777765
No 321
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=85.35 E-value=2.3 Score=36.09 Aligned_cols=47 Identities=13% Similarity=0.152 Sum_probs=38.7
Q ss_pred HHHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhcC
Q 020843 229 KKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDGG 277 (320)
Q Consensus 229 ~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~~ 277 (320)
.+.++.+++.++|+++|.. +|+.+..+.|..+++.|.+.|.+.+..+
T Consensus 166 ~~~a~~~gv~g~Pt~~i~~--~G~~~~~~~G~~~~~~l~~~l~~~~~~~ 212 (216)
T 2in3_A 166 FQRVAQWGISGFPALVVES--GTDRYLITTGYRPIEALRQLLDTWLQQH 212 (216)
T ss_dssp HHHHHHTTCCSSSEEEEEE--TTEEEEEESSCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCcccceEEEEE--CCEEEEeccCCCCHHHHHHHHHHHHHhc
Confidence 4567789999999998875 4877666789999999999999988763
No 322
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=84.96 E-value=1.9 Score=35.09 Aligned_cols=66 Identities=9% Similarity=0.161 Sum_probs=39.9
Q ss_pred cHHHHHHHHHhcCCeEEEEEeC----CCCcchhhhhhccCCCHHHHHHHhc---ceEEEEeecCChHHHHHHHHcCCCCC
Q 020843 168 SFEKAKDAASVQDKWLLVNLQS----TKEFSSHMLNRDTWANEAVSQTIST---NFIFWQVYDDTSEGKKVCTYYKLDSI 240 (320)
Q Consensus 168 sf~~A~~~Ak~~~K~LLV~l~~----~~~f~c~~lnRdvw~n~~V~~~l~~---nFV~~q~d~~s~eg~~~~~~Y~v~~~ 240 (320)
+..+.++...+.++ |.||..+ ++|+.|... +++|++ .|..+-++.+...-..+...++..++
T Consensus 23 ~~~~~v~~~i~~~~-Vvvy~ks~~~~~~Cp~C~~a----------k~~L~~~gv~y~~vdI~~d~~~~~~L~~~~G~~tv 91 (135)
T 2wci_A 23 TTIEKIQRQIAENP-ILLYMKGSPKLPSCGFSAQA----------VQALAACGERFAYVDILQNPDIRAELPKYANWPTF 91 (135)
T ss_dssp HHHHHHHHHHHHCS-EEEEESBCSSSBSSHHHHHH----------HHHHHTTCSCCEEEEGGGCHHHHHHHHHHHTCCSS
T ss_pred HHHHHHHHHhccCC-EEEEEEecCCCCCCccHHHH----------HHHHHHcCCceEEEECCCCHHHHHHHHHHHCCCCc
Confidence 45555666666666 5666665 789999654 555554 34444443332223455566677899
Q ss_pred cEEE
Q 020843 241 PVVL 244 (320)
Q Consensus 241 P~i~ 244 (320)
|.|+
T Consensus 92 P~Vf 95 (135)
T 2wci_A 92 PQLW 95 (135)
T ss_dssp CEEE
T ss_pred CEEE
Confidence 9875
No 323
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=84.94 E-value=2.5 Score=36.12 Aligned_cols=46 Identities=13% Similarity=0.112 Sum_probs=28.0
Q ss_pred cCCeEEE-EEeCCCCcchhh--hhhccCCCHHHHHHHhcce-EEEEeecCChH
Q 020843 179 QDKWLLV-NLQSTKEFSSHM--LNRDTWANEAVSQTISTNF-IFWQVYDDTSE 227 (320)
Q Consensus 179 ~~K~LLV-~l~~~~~f~c~~--lnRdvw~n~~V~~~l~~nF-V~~q~d~~s~e 227 (320)
.+||++| ++-..||+.|.. ++.- ++...++-+.++ .++.+..+++.
T Consensus 46 ~Gk~vVL~fyP~~~tp~Ct~~El~~f---~~~~~ef~~~g~d~VigIS~D~~~ 95 (176)
T 4f82_A 46 AGKRVVIFGLPGAFTPTCSAQHVPGY---VEHAEQLRAAGIDEIWCVSVNDAF 95 (176)
T ss_dssp TTCEEEEEEESCTTCHHHHHTHHHHH---HHHHHHHHHTTCCEEEEEESSCHH
T ss_pred CCCeEEEEEEcCCCCCCCCHHHHHHH---HHHHHHHHhCCCCEEEEEeCCCHH
Confidence 3677655 455789999965 3210 233344444567 78888877754
No 324
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=84.63 E-value=2.5 Score=36.06 Aligned_cols=46 Identities=9% Similarity=0.027 Sum_probs=37.5
Q ss_pred HHHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 229 KKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 229 ~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
.+.++.+++.++|+++|-+ .|+.+....|+.+++.|++.|...+++
T Consensus 159 ~~~a~~~gv~g~Pt~~v~~--~~~~~~~~~g~~~~e~~~~~i~~~~~~ 204 (208)
T 3kzq_A 159 LSLAKSLGVNSYPSLVLQI--NDAYFPIEVDYLSTEPTLKLIRERIIE 204 (208)
T ss_dssp HHHHHHTTCCSSSEEEEEE--TTEEEEECCCSSCSHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCcccEEEEEE--CCEEEEeeCCCCCHHHHHHHHHHHHhc
Confidence 4556678999999999866 366666678999999999999998865
No 325
>2oo9_A E3 ubiquitin-protein ligase CBL; alpha-helical domain, homodimer; 2.10A {Homo sapiens}
Probab=83.74 E-value=1.9 Score=28.84 Aligned_cols=38 Identities=11% Similarity=0.122 Sum_probs=34.0
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhc
Q 020843 10 KQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYV 49 (320)
Q Consensus 10 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~ 49 (320)
-++.|...|+. |-|.+.|++-|..++.|+|.|.+...+
T Consensus 4 ~e~~I~~L~s~--Gf~~~~~~rAL~ia~Nnie~A~nIL~e 41 (46)
T 2oo9_A 4 LSSEIENLMSQ--GYSYQDIQKALVIAQNNIEMAKNILRE 41 (46)
T ss_dssp HHHHHHHHHHT--TBCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHc--CCCHHHHHHHHHHhhccHHHHHHHHHH
Confidence 36789999998 999999999999999999999887654
No 326
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=83.36 E-value=10 Score=34.62 Aligned_cols=82 Identities=11% Similarity=0.103 Sum_probs=49.5
Q ss_pred eEEEEEeCCCCcchhhhhhccCCCHHHHHH-HhcceEE--EEee-cC-------------ChHHHHHHHHcCCCCC--cE
Q 020843 182 WLLVNLQSTKEFSSHMLNRDTWANEAVSQT-ISTNFIF--WQVY-DD-------------TSEGKKVCTYYKLDSI--PV 242 (320)
Q Consensus 182 ~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~-l~~nFV~--~q~d-~~-------------s~eg~~~~~~Y~v~~~--P~ 242 (320)
-.+..|.+++|+.|..-.+- +.++ .+.++|. |.++ .+ ..+...+.+.|+..++ |.
T Consensus 44 ~~VelyTs~gCp~C~~Ak~l------L~~~~~~~~vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~~~~G~~tVyTPq 117 (270)
T 2axo_A 44 GVVELFTSQGCASCPPADEA------LRKMIQKGDVVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALGRNGVYTPQ 117 (270)
T ss_dssp CEEEEEECTTCTTCHHHHHH------HHHHHHHTSSEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHTTCSCCCSSE
T ss_pred cEEEEEeCCCCCChHHHHHH------HHHhhccCCeeeEEEEEEEecccccccchhhhhhhHHHHHHHHHhCCCcccCCE
Confidence 45566677899999766432 1111 1224543 3432 22 2345668889998888 99
Q ss_pred EEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 243 VLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 243 i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
|+| + |+. .+.|+ +++.+.+.|.+....
T Consensus 118 I~I-n---g~~--~v~G~-d~~~l~~~l~~~~~~ 144 (270)
T 2axo_A 118 AIL-N---GRD--HVKGA-DVRGIYDRLDAFKRE 144 (270)
T ss_dssp EEE-T---TTE--EEETT-CHHHHHHHHHHHHHT
T ss_pred EEE-C---CEE--eecCC-CHHHHHHHHHHhhcc
Confidence 775 4 443 23464 688888888776554
No 327
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=82.92 E-value=3.8 Score=31.55 Aligned_cols=67 Identities=9% Similarity=0.141 Sum_probs=40.1
Q ss_pred cHHHHHHHHHhcCCeEEEEEeC----CCCcchhhhhhccCCCHHHHHHHhc---ceEEEEeecCChHHHHHHHHcCCCCC
Q 020843 168 SFEKAKDAASVQDKWLLVNLQS----TKEFSSHMLNRDTWANEAVSQTIST---NFIFWQVYDDTSEGKKVCTYYKLDSI 240 (320)
Q Consensus 168 sf~~A~~~Ak~~~K~LLV~l~~----~~~f~c~~lnRdvw~n~~V~~~l~~---nFV~~q~d~~s~eg~~~~~~Y~v~~~ 240 (320)
...+.++..-+.++ |+||-.+ ++|+.|+.. +++|++ .|..+-++.+...-..+....+..++
T Consensus 6 ~~~~~v~~~i~~~~-Vvvy~k~t~~~p~Cp~C~~a----------k~~L~~~gi~~~~~dI~~~~~~~~~l~~~~g~~tv 74 (109)
T 3ipz_A 6 QLKDTLEKLVNSEK-VVLFMKGTRDFPMCGFSNTV----------VQILKNLNVPFEDVNILENEMLRQGLKEYSNWPTF 74 (109)
T ss_dssp HHHHHHHHHHTSSS-EEEEESBCSSSBSSHHHHHH----------HHHHHHTTCCCEEEEGGGCHHHHHHHHHHHTCSSS
T ss_pred HHHHHHHHHHccCC-EEEEEecCCCCCCChhHHHH----------HHHHHHcCCCcEEEECCCCHHHHHHHHHHHCCCCC
Confidence 34556666667776 5555555 489988655 556654 35544444332323456566677899
Q ss_pred cEEEE
Q 020843 241 PVVLV 245 (320)
Q Consensus 241 P~i~I 245 (320)
|.|.|
T Consensus 75 P~ifi 79 (109)
T 3ipz_A 75 PQLYI 79 (109)
T ss_dssp CEEEE
T ss_pred CeEEE
Confidence 97753
No 328
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=82.90 E-value=2.2 Score=34.97 Aligned_cols=56 Identities=13% Similarity=0.114 Sum_probs=39.9
Q ss_pred CCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHh
Q 020843 203 WANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 203 w~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld 275 (320)
+.++.+.+.|+. ..++++.++|.++|+++| +|+.+....|..+.++|++.+...+.
T Consensus 127 ~~s~~~~~~v~~-------------~~~~a~~~gv~gTPtfiI----NGky~v~~~~~~s~e~~~~~i~~Ll~ 182 (184)
T 4dvc_A 127 YNGFAVDSMVHR-------------FDKQFQDSGLTGVPAVVV----NNRYLVQGQSAKSLDEYFDLVNYLLT 182 (184)
T ss_dssp HTSHHHHHHHHH-------------HHHHHHHHTCCSSSEEEE----TTTEEECGGGCSSHHHHHHHHHHHTT
T ss_pred HhCHHHHHHHHH-------------HHHHHHHcCCCcCCEEEE----CCEEeeCCcCCCCHHHHHHHHHHHHh
Confidence 356667666663 346777899999999886 57655444556789999988876654
No 329
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=82.79 E-value=4.4 Score=32.01 Aligned_cols=88 Identities=16% Similarity=0.193 Sum_probs=47.9
Q ss_pred HHHHHHHHhcCCeEEEEEeC----CCCcchhhhhhccCCCHHHHHHHhcc------eEEEEeecCChHH-HHHHHHcCCC
Q 020843 170 EKAKDAASVQDKWLLVNLQS----TKEFSSHMLNRDTWANEAVSQTISTN------FIFWQVYDDTSEG-KKVCTYYKLD 238 (320)
Q Consensus 170 ~~A~~~Ak~~~K~LLV~l~~----~~~f~c~~lnRdvw~n~~V~~~l~~n------FV~~q~d~~s~eg-~~~~~~Y~v~ 238 (320)
.+.++..-+.++ |+||--+ ++|+.|... +++|++. |..+-++. +++. ..+....+..
T Consensus 6 ~~~v~~~i~~~~-Vvvfsk~t~~~p~Cp~C~~a----------k~lL~~~gv~~~~~~~~dv~~-~~~~~~~l~~~sg~~ 73 (121)
T 3gx8_A 6 RKAIEDAIESAP-VVLFMKGTPEFPKCGFSRAT----------IGLLGNQGVDPAKFAAYNVLE-DPELREGIKEFSEWP 73 (121)
T ss_dssp HHHHHHHHHSCS-EEEEESBCSSSBCTTHHHHH----------HHHHHHHTBCGGGEEEEECTT-CHHHHHHHHHHHTCC
T ss_pred HHHHHHHhccCC-EEEEEeccCCCCCCccHHHH----------HHHHHHcCCCcceEEEEEecC-CHHHHHHHHHHhCCC
Confidence 445566666676 5555554 489888655 5555542 44444332 2333 4455556778
Q ss_pred CCcEEEEEecCCCceEEEEecCCChHHHHH--HHHHHHhc
Q 020843 239 SIPVVLVVDPITGQKMRSWCGMVQPESLLE--DLVPFMDG 276 (320)
Q Consensus 239 ~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~--~L~~fld~ 276 (320)
++|.|.| + |+. +-|+-+...+.+ .|...|..
T Consensus 74 tvP~vfI-~---g~~---iGG~d~l~~l~~~G~L~~~L~~ 106 (121)
T 3gx8_A 74 TIPQLYV-N---KEF---IGGCDVITSMARSGELADLLEE 106 (121)
T ss_dssp SSCEEEE-T---TEE---EESHHHHHHHHHHTHHHHHHHH
T ss_pred CCCeEEE-C---CEE---EecHHHHHHHHHcCChHHHHHH
Confidence 9999863 3 544 345433333332 45555543
No 330
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=82.70 E-value=2.9 Score=33.10 Aligned_cols=67 Identities=24% Similarity=0.307 Sum_probs=39.0
Q ss_pred ccHHHHHHHHHhcCCeEEEEEeC----CCCcchhhhhhccCCCHHHHHHHhcc----eEEEEeecCChHH-HHHHHHcCC
Q 020843 167 GSFEKAKDAASVQDKWLLVNLQS----TKEFSSHMLNRDTWANEAVSQTISTN----FIFWQVYDDTSEG-KKVCTYYKL 237 (320)
Q Consensus 167 gsf~~A~~~Ak~~~K~LLV~l~~----~~~f~c~~lnRdvw~n~~V~~~l~~n----FV~~q~d~~s~eg-~~~~~~Y~v 237 (320)
|...+.++..-++++ |+||--+ ++|+.|... +++|++. |..+-++. +++. ..+....+.
T Consensus 7 ~~~~~~v~~~i~~~~-Vvvfsk~t~~~p~Cp~C~~a----------k~lL~~~gv~~~~~vdV~~-d~~~~~~l~~~tg~ 74 (118)
T 2wem_A 7 GGSAEQLDALVKKDK-VVVFLKGTPEQPQCGFSNAV----------VQILRLHGVRDYAAYNVLD-DPELRQGIKDYSNW 74 (118)
T ss_dssp --CHHHHHHHHHHSS-EEEEESBCSSSBSSHHHHHH----------HHHHHHTTCCCCEEEESSS-CHHHHHHHHHHHTC
T ss_pred ccHHHHHHHHhccCC-EEEEEecCCCCCccHHHHHH----------HHHHHHcCCCCCEEEEcCC-CHHHHHHHHHHhCC
Confidence 345666777777776 4555554 488888554 5666653 44444432 3444 344445567
Q ss_pred CCCcEEEE
Q 020843 238 DSIPVVLV 245 (320)
Q Consensus 238 ~~~P~i~I 245 (320)
.++|.|.|
T Consensus 75 ~tvP~vfI 82 (118)
T 2wem_A 75 PTIPQVYL 82 (118)
T ss_dssp CSSCEEEE
T ss_pred CCcCeEEE
Confidence 89999853
No 331
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=81.98 E-value=3.9 Score=32.85 Aligned_cols=62 Identities=10% Similarity=0.081 Sum_probs=37.1
Q ss_pred HHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc------ceEEEEeecCC--hHHHHHH-HHcCCCCCcE
Q 020843 172 AKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST------NFIFWQVYDDT--SEGKKVC-TYYKLDSIPV 242 (320)
Q Consensus 172 A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~------nFV~~q~d~~s--~eg~~~~-~~Y~v~~~P~ 242 (320)
.++...+.++ | |-|..+||+.|... +++|++ .|..+.++.+. .+-+++. +.++..++|.
T Consensus 6 ~~~~ii~~~~-V-vvysk~~Cp~C~~a----------k~lL~~~~~~~v~~~~idid~~~d~~~~~~~l~~~~G~~tVP~ 73 (127)
T 3l4n_A 6 EYSLILDLSP-I-IIFSKSTCSYSKGM----------KELLENEYQFIPNYYIIELDKHGHGEELQEYIKLVTGRGTVPN 73 (127)
T ss_dssp HHHHHHTSCS-E-EEEECTTCHHHHHH----------HHHHHHHEEEESCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCE
T ss_pred HHHHHHccCC-E-EEEEcCCCccHHHH----------HHHHHHhcccCCCcEEEEecCCCCHHHHHHHHHHHcCCCCcce
Confidence 3444555566 4 44456899999655 566665 35555566542 2334433 4557789999
Q ss_pred EEE
Q 020843 243 VLV 245 (320)
Q Consensus 243 i~I 245 (320)
|.|
T Consensus 74 IfI 76 (127)
T 3l4n_A 74 LLV 76 (127)
T ss_dssp EEE
T ss_pred EEE
Confidence 964
No 332
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=79.45 E-value=6.8 Score=36.57 Aligned_cols=121 Identities=13% Similarity=0.081 Sum_probs=70.0
Q ss_pred HHhhhhhcCCCccccccccHHHHHHHHHh-cCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc--ceEEEEeecCC-
Q 020843 150 RDNLASLYRPPFHLMFNGSFEKAKDAASV-QDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST--NFIFWQVYDDT- 225 (320)
Q Consensus 150 ~~~l~~lf~Ppf~~~~~gsf~~A~~~Ak~-~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~--nFV~~q~d~~s- 225 (320)
.+.+..--.|.+..+...++. +.-.. ..+.++|.|.+.++..|+.+-+. + ..|.+-.+. .+.|.-+|.+.
T Consensus 219 ~~fi~~~~~p~v~elt~~~~~---~~~~~~~~~~~~~~f~~~~~~~~~~~~~~-l--~~vA~~~~~~~ki~F~~id~~~~ 292 (367)
T 3us3_A 219 VNFVEEHRRSTLRKLKPESMY---ETWEDDMDGIHIVAFAEEADPDGYEFLEI-L--KSVAQDNTDNPDLSIIWIDPDDF 292 (367)
T ss_dssp HHHHHHTCSCSEEECCGGGHH---HHHHSCBTTEEEEEECCTTSHHHHHHHHH-H--HHHHHHTTTCTTCCEEEECGGGC
T ss_pred HHHHHHcCccceeecChhhHH---HHHhhccCCcEEEEEEcCCChhHHHHHHH-H--HHHHHHcCCCCceEEEEECCccc
Confidence 344444434544443333433 22222 24556666777777767666442 1 345454554 47777777654
Q ss_pred hHHHHH-HHHcCCC-CCcEEEEEecCCCce-EEEEec---CCChHHHHHHHHHHHhc
Q 020843 226 SEGKKV-CTYYKLD-SIPVVLVVDPITGQK-MRSWCG---MVQPESLLEDLVPFMDG 276 (320)
Q Consensus 226 ~eg~~~-~~~Y~v~-~~P~i~Iidp~tG~~-v~~~~G---~~~~~~fl~~L~~fld~ 276 (320)
+....+ .+.|++. .+|.++|+++.++.. .....+ .++++.+.+-|..+++-
T Consensus 293 ~~~l~~~~~~fgl~~~~P~~~i~~~~~~~~~~y~~~~~~~~~t~~~i~~F~~~~~~G 349 (367)
T 3us3_A 293 PLLVPYWEKTFDIDLSAPQIGVVNVTDADSVWMEMDDEEDLPSAEELEDWLEDVLEG 349 (367)
T ss_dssp TTTHHHHHHHHTCCTTSCEEEEEETTTCCEEECCCCTTSCCCCHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHhcCCCCCCCeEEEEecccccceeecCCcccccCCHHHHHHHHHHHHcC
Confidence 222222 4567775 899999999866532 222333 58899888888888875
No 333
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=78.82 E-value=4.5 Score=35.53 Aligned_cols=48 Identities=6% Similarity=0.126 Sum_probs=36.4
Q ss_pred HHHHHH-cCCCCCcEEEEEecCCCceEE-----EEecCCChHHHHHHHHHHHhcC
Q 020843 229 KKVCTY-YKLDSIPVVLVVDPITGQKMR-----SWCGMVQPESLLEDLVPFMDGG 277 (320)
Q Consensus 229 ~~~~~~-Y~v~~~P~i~Iidp~tG~~v~-----~~~G~~~~~~fl~~L~~fld~~ 277 (320)
.+.++. +++.++|+++|+++ +|+.+. .+.|+.+++.|.+.|...+..-
T Consensus 160 ~~~a~~~~GV~GtPtfvv~~~-nG~~~~Ga~~~~~~G~~~~e~l~~~I~~~l~~~ 213 (226)
T 3f4s_A 160 KSLAINKLGITAVPIFFIKLN-DDKSYIEHNKVKHGGYKELKYFTNVIDKLYGKA 213 (226)
T ss_dssp HHHHHHHHCCCSSCEEEEEEC-CTTCCCCGGGGEEESCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcCCEEEEEcC-CCEEeeCCCCcccccccCHHHHHHHHHHHHhcC
Confidence 456667 89999999999875 576541 3456666999999999988753
No 334
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=78.57 E-value=0.77 Score=39.63 Aligned_cols=56 Identities=7% Similarity=-0.024 Sum_probs=35.8
Q ss_pred CCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCC---hHHHHHHHHc
Q 020843 180 DKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDT---SEGKKVCTYY 235 (320)
Q Consensus 180 ~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s---~eg~~~~~~Y 235 (320)
.|..+|.|++.||+.|..|...+=-.+.+.+.+.++.+|..++++. +.+...++.|
T Consensus 113 ~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~~~~~~~~~~~a~a~ 171 (197)
T 1un2_A 113 GAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFMGGDLGKDLTQAW 171 (197)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECSSSSHHHHHHHHHHH
T ss_pred CCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEeccCcCCccchHHHHHHH
Confidence 5789999999999999999643212234444444566666666643 3455554433
No 335
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=75.75 E-value=4.1 Score=34.30 Aligned_cols=44 Identities=16% Similarity=0.295 Sum_probs=34.7
Q ss_pred HHHHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHh
Q 020843 228 GKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 228 g~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld 275 (320)
..+.++.+++.++|+++| +|+.+....|..+.+.|.+.|...++
T Consensus 141 ~~~~a~~~gv~GtPtfvv----ng~~~v~~~Ga~~~e~~~~~i~~ll~ 184 (185)
T 3feu_A 141 AKMLSEKSGISSVPTFVV----NGKYNVLIGGHDDPKQIADTIRYLLE 184 (185)
T ss_dssp HHHHHHHHTCCSSSEEEE----TTTEEECGGGCSSHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCccCEEEE----CCEEEEecCCCCCHHHHHHHHHHHHh
Confidence 455677899999999996 47655444799999999999888765
No 336
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=75.75 E-value=5.1 Score=34.57 Aligned_cols=58 Identities=17% Similarity=0.339 Sum_probs=40.9
Q ss_pred CCCHHHHHHHhcceEEEEeecCChHHHHHH-HHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 020843 203 WANEAVSQTISTNFIFWQVYDDTSEGKKVC-TYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDGGPRE 280 (320)
Q Consensus 203 w~n~~V~~~l~~nFV~~q~d~~s~eg~~~~-~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~~~~d 280 (320)
+.++.+.+.|+. ..+.+ +.++|.++|+++| +|+. +.|..+++.|.+.|.+.+.++-.-
T Consensus 144 l~s~~~~~~v~~-------------~~~~a~~~~GV~GtPtfvv----ng~~---~~G~~~~e~l~~~i~~~~~~~~~~ 202 (205)
T 3gmf_A 144 LSNEALAKKLAA-------------ETDEAINQYNVSGTPSFMI----DGIL---LAGTHDWASLRPQILARLNEGHHH 202 (205)
T ss_dssp HTCHHHHHHHHH-------------HHHHHHHHHCCCSSSEEEE----TTEE---CTTCCSHHHHHHHHHHHHTC----
T ss_pred HcCHHHHHHHHH-------------HHHHHHHHcCCccCCEEEE----CCEE---EeCCCCHHHHHHHHHHHhhccccc
Confidence 355666666653 23455 7889999999987 4653 579999999999999998876543
No 337
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=75.29 E-value=2 Score=36.38 Aligned_cols=39 Identities=8% Similarity=-0.045 Sum_probs=28.8
Q ss_pred cCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc---ceEEEEeec
Q 020843 179 QDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST---NFIFWQVYD 223 (320)
Q Consensus 179 ~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~---nFV~~q~d~ 223 (320)
.+|..+|.|.+.||+.|..|.. .+.+++++ +++|..+.+
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~------~l~~~~~~~~~~v~~~~~p~ 64 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEP------VLSKHAKSFKDDMYLRTEHV 64 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHH------HHHHHHTTCCTTEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHHH------HHHHHHHHCCCCeEEEEecC
Confidence 3789999999999999999974 44555443 466666654
No 338
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=74.52 E-value=5 Score=34.37 Aligned_cols=43 Identities=9% Similarity=0.200 Sum_probs=35.0
Q ss_pred HHHHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhcC
Q 020843 228 GKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDGG 277 (320)
Q Consensus 228 g~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~~ 277 (320)
..++++.+++.++|+++| +|+. +.|..+++.|.+.|.+.+.+.
T Consensus 152 ~~~~a~~~gV~gtPtfvv----nG~~---~~G~~~~e~l~~~i~~~~~~~ 194 (202)
T 3gha_A 152 DSDLNQKMNIQATPTIYV----NDKV---IKNFADYDEIKETIEKELKGK 194 (202)
T ss_dssp HHHHHHHTTCCSSCEEEE----TTEE---CSCTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCCcCCEEEE----CCEE---ecCCCCHHHHHHHHHHHHHhh
Confidence 356777899999999987 4654 568899999999999988763
No 339
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=74.16 E-value=8.5 Score=33.29 Aligned_cols=67 Identities=10% Similarity=0.016 Sum_probs=40.4
Q ss_pred ccHHHHHHHHHhc---CCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc---ceEEEEeecCChHHHHHHHHcCCCCC
Q 020843 167 GSFEKAKDAASVQ---DKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST---NFIFWQVYDDTSEGKKVCTYYKLDSI 240 (320)
Q Consensus 167 gsf~~A~~~Ak~~---~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~---nFV~~q~d~~s~eg~~~~~~Y~v~~~ 240 (320)
.+.+++++.-+.. ...|.| +..++|+.|+.. +++|++ .|...-++.+ ++...+...|+..++
T Consensus 153 ~~~~~il~~l~~~~i~~~~i~l-y~~~~Cp~C~~a----------~~~L~~~~i~~~~~~i~~~-~~~~~l~~~~g~~~v 220 (241)
T 1nm3_A 153 SDADTMLKYLAPQHQVQESISI-FTKPGCPFCAKA----------KQLLHDKGLSFEEIILGHD-ATIVSVRAVSGRTTV 220 (241)
T ss_dssp SSHHHHHHHHCTTSCCCCCEEE-EECSSCHHHHHH----------HHHHHHHTCCCEEEETTTT-CCHHHHHHHTCCSSS
T ss_pred cCHHHHHHHhhhhccccceEEE-EECCCChHHHHH----------HHHHHHcCCceEEEECCCc-hHHHHHHHHhCCCCc
Confidence 4555555544432 233444 456899999765 445544 3544444333 445778888998999
Q ss_pred cEEEE
Q 020843 241 PVVLV 245 (320)
Q Consensus 241 P~i~I 245 (320)
|.|.|
T Consensus 221 P~~~~ 225 (241)
T 1nm3_A 221 PQVFI 225 (241)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 99863
No 340
>1aip_C EF-TS, elongation factor TS; nucleotide exchange, GTP-binding, complex of two elongation factors; 3.00A {Thermus thermophilus} SCOP: a.5.2.2 d.43.1.1
Probab=73.17 E-value=3.4 Score=36.10 Aligned_cols=40 Identities=18% Similarity=0.346 Sum_probs=35.8
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcC
Q 020843 10 KQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVG 50 (320)
Q Consensus 10 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~ 50 (320)
.-.+|.++-+. ||+..-.|+.-|+.++||+|.|+..-=..
T Consensus 3 ~a~~VKeLRe~-TGagmmdCKkAL~e~~GD~ekAie~LR~k 42 (196)
T 1aip_C 3 QMELIKKLREA-TGAGMMDVKRALEDAGWDEEKAVQLLRER 42 (196)
T ss_dssp HHHHHHHHHHH-HCCCHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHH-hCCCHHHHHHHHHHcCCCHHHHHHHHHHc
Confidence 36789999999 99999999999999999999999977653
No 341
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=71.84 E-value=23 Score=30.90 Aligned_cols=117 Identities=17% Similarity=0.147 Sum_probs=64.2
Q ss_pred hHHhhhhhcCCCccccccccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCH--HHHHHHhcc---eEEEEeec
Q 020843 149 SRDNLASLYRPPFHLMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANE--AVSQTISTN---FIFWQVYD 223 (320)
Q Consensus 149 ~~~~l~~lf~Ppf~~~~~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~--~V~~~l~~n---FV~~q~d~ 223 (320)
-.+.+..-..|.+..+...++.+. ....++++++..+.+......+ -|.+. .|.+-.+.. +.|.-+|.
T Consensus 104 l~~fi~~~~~Plv~e~t~~n~~~~-----~~~~~~v~~~~~~~~~~~~~~~--~~~~~~~~vA~~~~~k~~~~~F~~~d~ 176 (252)
T 2h8l_A 104 IKKFIQENIFGICPHMTEDNKDLI-----QGKDLLIAYYDVDYEKNAKGSN--YWRNRVMMVAKKFLDAGHKLNFAVASR 176 (252)
T ss_dssp HHHHHHHHSSCSSCEECTTTHHHH-----SSSSEEEEEECCBTTTBHHHHH--HHHHHHHHHHHHHHHTTCCCEEEEEET
T ss_pred HHHHHHhcccCCeeecccccHhhh-----cCCCeEEEEeecchhhcchhHH--HHHHHHHHHHHHccccCceEEEEEEch
Confidence 344555555677776666666553 2334444444322221111111 12221 244444444 77877776
Q ss_pred CChHHHHHHHHcCC----CCCcEEEEEecCCCceEEEEecCCChHH--HHHHHHHHHhc
Q 020843 224 DTSEGKKVCTYYKL----DSIPVVLVVDPITGQKMRSWCGMVQPES--LLEDLVPFMDG 276 (320)
Q Consensus 224 ~s~eg~~~~~~Y~v----~~~P~i~Iidp~tG~~v~~~~G~~~~~~--fl~~L~~fld~ 276 (320)
+. -+ ++.+.|++ ..+|.|+|++. .|.+ ....+.++.+. +.+-|..+++-
T Consensus 177 ~~-~~-~~~~~fgl~~~~~~~P~v~i~~~-~~~k-y~~~~~~t~~~~~i~~F~~~~~~G 231 (252)
T 2h8l_A 177 KT-FS-HELSDFGLESTAGEIPVVAIRTA-KGEK-FVMQEEFSRDGKALERFLQDYFDG 231 (252)
T ss_dssp TT-TH-HHHGGGTCCCCSCSSCEEEEECT-TSCE-EECCSCCCTTSHHHHHHHHHHHHT
T ss_pred HH-HH-HHHHHcCCCCccCCCCEEEEEeC-cCcE-ecCCcccCcchHHHHHHHHHHHCC
Confidence 53 23 37788888 36999999986 4543 33456666666 66666666653
No 342
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=71.79 E-value=7.7 Score=32.96 Aligned_cols=46 Identities=13% Similarity=0.087 Sum_probs=28.2
Q ss_pred cCCeEEEEEeC-CCCcchh--hhhhccCCCHHHHHH-Hhcce-EEEEeecCChH
Q 020843 179 QDKWLLVNLQS-TKEFSSH--MLNRDTWANEAVSQT-ISTNF-IFWQVYDDTSE 227 (320)
Q Consensus 179 ~~K~LLV~l~~-~~~f~c~--~lnRdvw~n~~V~~~-l~~nF-V~~q~d~~s~e 227 (320)
.+||++|+++- .||+.|. .++.- ++...++ -..+. .++.+..+++.
T Consensus 42 ~gk~vVL~fyP~~fTp~Ct~~e~~~f---~~~~~~f~~~~g~~~V~gvS~D~~~ 92 (182)
T 1xiy_A 42 NNKKILLISLPGAFTPTCSTKMIPGY---EEEYDYFIKENNFDDIYCITNNDIY 92 (182)
T ss_dssp TTCEEEEEECSCTTCHHHHHTHHHHH---HHTHHHHHTTSCCSEEEEEESSCHH
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHH---HHHHHHHHHhCCCcEEEEEeCCCHH
Confidence 57899998884 5799997 23211 2234445 34455 37777777643
No 343
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=71.67 E-value=15 Score=28.35 Aligned_cols=65 Identities=11% Similarity=0.190 Sum_probs=38.5
Q ss_pred cHHHHHHHHHhcCCeEEEEEeC-----CCCcchhhhhhccCCCHHHHHHHhc---ceEEEEeecCChHH-HHHHHHcCCC
Q 020843 168 SFEKAKDAASVQDKWLLVNLQS-----TKEFSSHMLNRDTWANEAVSQTIST---NFIFWQVYDDTSEG-KKVCTYYKLD 238 (320)
Q Consensus 168 sf~~A~~~Ak~~~K~LLV~l~~-----~~~f~c~~lnRdvw~n~~V~~~l~~---nFV~~q~d~~s~eg-~~~~~~Y~v~ 238 (320)
+.++.++..-++++.+ ||. . ++|+.|... +++|++ .|..+-++.+ ++. ..+....+..
T Consensus 4 ~~~~~v~~~i~~~~Vv-lf~-kg~~~~~~Cp~C~~a----------k~~L~~~gi~y~~~di~~d-~~~~~~l~~~~g~~ 70 (111)
T 3zyw_A 4 DLNLRLKKLTHAAPCM-LFM-KGTPQEPRCGFSKQM----------VEILHKHNIQFSSFDIFSD-EEVRQGLKAYSSWP 70 (111)
T ss_dssp CHHHHHHHHHTSSSEE-EEE-SBCSSSBSSHHHHHH----------HHHHHHTTCCCEEEEGGGC-HHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHhcCCEE-EEE-ecCCCCCcchhHHHH----------HHHHHHcCCCeEEEECcCC-HHHHHHHHHHHCCC
Confidence 3456666666666643 443 4 789999655 455554 3555444433 444 3444555778
Q ss_pred CCcEEEE
Q 020843 239 SIPVVLV 245 (320)
Q Consensus 239 ~~P~i~I 245 (320)
++|.|.|
T Consensus 71 tvP~ifi 77 (111)
T 3zyw_A 71 TYPQLYV 77 (111)
T ss_dssp SSCEEEE
T ss_pred CCCEEEE
Confidence 9999864
No 344
>4ae4_A Ubiquitin-associated protein 1; protein transport, endosomal sorting, tetherin, VPU, HIV-1, monoubiquitin; HET: NHE; 1.65A {Homo sapiens} PDB: 4ae4_B*
Probab=71.38 E-value=4.6 Score=32.33 Aligned_cols=41 Identities=10% Similarity=0.336 Sum_probs=37.7
Q ss_pred cchHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcC
Q 020843 8 NDKQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVG 50 (320)
Q Consensus 8 ~~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~ 50 (320)
.++.+.|.+++++ |-+...|++-|..++.|.+.|++-.|..
T Consensus 6 ~~e~~~v~~l~~M--GFp~~~~~kAl~~~g~~~e~amewL~~h 46 (118)
T 4ae4_A 6 PSERQCVETVVNM--GYSYECVLRAMKAAGANIEQILDYLFAH 46 (118)
T ss_dssp HHHHHHHHHHHHT--TCCHHHHHHHHHHHCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc--CCCHHHHHHHHHHHCcCHHHHHHHHHHh
Confidence 3478999999999 9999999999999999999999998875
No 345
>1oqy_A HHR23A, UV excision repair protein RAD23 homolog A; DNA repair, proteasome-mediated degradation, protein- protein interaction, replication; NMR {Homo sapiens} SCOP: a.5.2.1 a.5.2.1 a.189.1.1 d.15.1.1 PDB: 1qze_A 1tp4_A
Probab=71.04 E-value=2.4 Score=40.51 Aligned_cols=42 Identities=19% Similarity=0.338 Sum_probs=37.8
Q ss_pred chHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCCC
Q 020843 9 DKQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNE 52 (320)
Q Consensus 9 ~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 52 (320)
..++.|.+.+++ |-+.+.|++-|.+++||++.|++-.|+...
T Consensus 167 ~~~~~i~~l~~M--Gf~~~~~~~AL~a~~nn~~~A~e~L~~gip 208 (368)
T 1oqy_A 167 EYETMLTEIMSM--GYERERVVAALRASYNNPHRAVEYLLTGIP 208 (368)
T ss_dssp THHHHHHHHHTT--TCCSHHHHHHHHHSCSSTTHHHHTTTTSST
T ss_pred chHHHHHHHHHc--CCCHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 367899999999 899999999999999999999999987543
No 346
>2qho_B E3 ubiquitin-protein ligase EDD1; protein-protein complex, protein binding/ligase complex; 1.85A {Homo sapiens}
Probab=69.56 E-value=10 Score=25.66 Aligned_cols=44 Identities=14% Similarity=0.215 Sum_probs=37.6
Q ss_pred chHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCCC
Q 020843 9 DKQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNE 52 (320)
Q Consensus 9 ~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~~ 52 (320)
-.+++|.|-..+-.|.+.++-++=|+++|-|+..||+..++..+
T Consensus 8 vPe~li~q~q~VLqgksR~vIirELqrTnLdVN~AvNNlLsRDd 51 (53)
T 2qho_B 8 IPEELISQAQVVLQGKSRSVIIRELQRTNLDVNLAVNNLLSRDD 51 (53)
T ss_dssp SCHHHHHHHHHHSTTCCHHHHHHHHHHTTTCHHHHHHHHHC---
T ss_pred CcHHHHHHHHHHhcCCcHHHHHHHHHHhCccHHHHHHHHhcccc
Confidence 35789999888889999999999999999999999999887543
No 347
>1xb2_B EF-TS, elongation factor TS, mitochondrial, EF-TSMT; protein-protein complex, translation; HET: MSE; 2.20A {Bos taurus} SCOP: a.5.2.2 d.43.1.1 d.43.1.1
Probab=68.28 E-value=4.2 Score=37.66 Aligned_cols=38 Identities=11% Similarity=0.083 Sum_probs=35.0
Q ss_pred HHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhc
Q 020843 11 QSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYV 49 (320)
Q Consensus 11 ~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~ 49 (320)
..+|.++-+. ||+..-.|+.-|+.++||+|.|++.-=.
T Consensus 5 a~~VKeLRe~-TGagmmdCKKAL~e~~GD~ekAie~LR~ 42 (291)
T 1xb2_B 5 KELLMKLRRK-TGYSFINCKKALETCGGDLKQAESWLHK 42 (291)
T ss_dssp HHHHHHHHHH-HCCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHH-hCCCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 5688999999 9999999999999999999999998765
No 348
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=67.82 E-value=17 Score=33.84 Aligned_cols=114 Identities=11% Similarity=0.128 Sum_probs=62.0
Q ss_pred HhhhhhcCCCccccccccHHHHHHHHHhcCCeEEEEEeCCCCcc-hhhhhhccCCCHHHHHHH---hcceEEEEeecCCh
Q 020843 151 DNLASLYRPPFHLMFNGSFEKAKDAASVQDKWLLVNLQSTKEFS-SHMLNRDTWANEAVSQTI---STNFIFWQVYDDTS 226 (320)
Q Consensus 151 ~~l~~lf~Ppf~~~~~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~-c~~lnRdvw~n~~V~~~l---~~nFV~~q~d~~s~ 226 (320)
..+..-..|.+.. -+.+.+.+.. ..++.++|.|+..++.. |+.+- +.|.+.. +..+.|..+|.+.-
T Consensus 211 ~fi~~~~~p~v~e---lt~~~~~~~~-~~~~~~~v~f~~~~~~~~~~~~~------~~~~~~~~~~~~~i~f~~id~~~~ 280 (382)
T 2r2j_A 211 NWIQDKCVPLVRE---ITFENGEELT-EEGLPFLILFHMKEDTESLEIFQ------NEVARQLISEKGTINFLHADCDKF 280 (382)
T ss_dssp HHHHHHHSCSSEE---CCHHHHHHHH-TTCCCEEEEEECTTCCHHHHHHH------HHHHHHTGGGTTTSEEEEEETTTT
T ss_pred HHHHhcccCceEe---cChhhHHHHh-cCCCcEEEEEecCCchHHHHHHH------HHHHHHHHHhCCeeEEEEEchHHh
Confidence 3333333444443 4455554443 45677777788776532 22221 2233322 34677777776642
Q ss_pred HHHHHHHHcCCC--CCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 227 EGKKVCTYYKLD--SIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 227 eg~~~~~~Y~v~--~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
..++..+++. .+|.|+|++.+.+..+....+..+++.+.+-|..+++.
T Consensus 281 --~~~~~~~gl~~~~~P~i~i~~~~~~y~~~~~~~~~~~~~i~~F~~d~~~G 330 (382)
T 2r2j_A 281 --RHPLLHIQKTPADCPVIAIDSFRHMYVFGDFKDVLIPGKLKQFVFDLHSG 330 (382)
T ss_dssp --HHHHHHTTCCGGGCSEEEEECSSCEEECCCSGGGGSTTHHHHHHHHHHHT
T ss_pred --HHHHHHcCCCccCCCEEEEEcchhcCCCCccccccCHHHHHHHHHHHHCC
Confidence 2467788885 69999998863221111122444566676667776654
No 349
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=67.74 E-value=5.9 Score=39.33 Aligned_cols=79 Identities=10% Similarity=0.155 Sum_probs=47.0
Q ss_pred HhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCCceEEE
Q 020843 177 SVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRS 256 (320)
Q Consensus 177 k~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~~ 256 (320)
....++++|.|.+.... + ..+.+.++.....|.+....++. ..++++|+|..||+++++++ +|+. ..
T Consensus 154 ~~~~~~vallF~~~~s~----~-----~~~~~ldl~~~~~v~v~~v~~~~--~~l~~kfgV~~~Pslvl~~~-nGk~-~~ 220 (519)
T 3t58_A 154 RNKADYLALVFEREDSY----L-----GREVTLDLSQYHAVAVRRVLNTE--SDLVNKFGVTDFPSCYLLLR-NGSV-SR 220 (519)
T ss_dssp SCCCSEEEEEEECTTCC----H-----HHHHHHHTTTCTTEEEEEEETTC--HHHHHHHTCCCSSEEEEEET-TSCE-EE
T ss_pred cCCCCeEEEEecCCchH----H-----HHHHHHHhhccCCeeEEEecCch--HHHHHHcCCCCCCeEEEEeC-CCce-ee
Confidence 36778999998876411 1 11233344443445555444332 45888999999999999996 4643 33
Q ss_pred EecCCChHHHHH
Q 020843 257 WCGMVQPESLLE 268 (320)
Q Consensus 257 ~~G~~~~~~fl~ 268 (320)
+....+...++.
T Consensus 221 ~~v~~~~r~~~~ 232 (519)
T 3t58_A 221 VPVLVESRSFYT 232 (519)
T ss_dssp CCCSSCSHHHHH
T ss_pred cccccccHHHHH
Confidence 343444444443
No 350
>2di0_A Activating signal cointegrator 1 complex subunit 2; ASCC2, CUE domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=66.30 E-value=12 Score=27.24 Aligned_cols=44 Identities=9% Similarity=0.102 Sum_probs=38.1
Q ss_pred cchHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCC
Q 020843 8 NDKQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGN 51 (320)
Q Consensus 8 ~~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~ 51 (320)
.+..+.|.+..+|=---........|+.+|.|+|.+|+..+++.
T Consensus 11 ~~l~s~I~qV~DLfPdLG~gfi~~~L~~y~~nvE~vin~LLE~~ 54 (71)
T 2di0_A 11 VELDSLISQVKDLLPDLGEGFILACLEYYHYDPEQVINNILEER 54 (71)
T ss_dssp HHHHHHHHHHHHHCCSSCHHHHHHHHHHTTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcccCCHHHHHHHHHHhCCCHHHHHHHHHccC
Confidence 34577888888886677889999999999999999999999963
No 351
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=66.09 E-value=7 Score=32.36 Aligned_cols=41 Identities=20% Similarity=0.176 Sum_probs=29.9
Q ss_pred HHHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 229 KKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 229 ~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
.++++.+++.++|+++| +|+. +.|..+++.|.+.|...+..
T Consensus 139 ~~~a~~~gv~GtPt~vv----nG~~---~~G~~~~~~l~~~i~~~~~~ 179 (186)
T 3bci_A 139 KKIAKDNHIKTTPTAFI----NGEK---VEDPYDYESYEKLLKDKIKL 179 (186)
T ss_dssp HHHHHHTTCCSSSEEEE----TTEE---CSCTTCHHHHHHHHHC----
T ss_pred HHHHHHcCCCCCCeEEE----CCEE---cCCCCCHHHHHHHHHHHHHh
Confidence 45777899999999987 4754 46888999998888877643
No 352
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=65.67 E-value=13 Score=26.77 Aligned_cols=49 Identities=16% Similarity=0.156 Sum_probs=30.3
Q ss_pred EeCC----CCcchhhhhhccCCCHHHHHHHhc---ceEEEEeec----CChHH-HHHHHHcCCC-----CCcEEEE
Q 020843 187 LQST----KEFSSHMLNRDTWANEAVSQTIST---NFIFWQVYD----DTSEG-KKVCTYYKLD-----SIPVVLV 245 (320)
Q Consensus 187 l~~~----~~f~c~~lnRdvw~n~~V~~~l~~---nFV~~q~d~----~s~eg-~~~~~~Y~v~-----~~P~i~I 245 (320)
+..+ +|+.|+.. +++|++ .|..+-++. .+++. ..+...++.. ++|.|.|
T Consensus 5 Y~~~~~~~~Cp~C~~a----------k~~L~~~gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v~i 70 (87)
T 1aba_A 5 YGYDSNIHKCGPCDNA----------KRLLTVKKQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVFA 70 (87)
T ss_dssp EECCTTTSCCHHHHHH----------HHHHHHTTCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEEC
T ss_pred EEeCCCCCcCccHHHH----------HHHHHHcCCCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEEEE
Confidence 3567 89999654 556654 355554442 23333 4566677777 8999875
No 353
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=64.50 E-value=6.1 Score=31.70 Aligned_cols=121 Identities=19% Similarity=0.107 Sum_probs=69.0
Q ss_pred hcCCCccccccccHHHHHHHHHhcC-CeEEEEEeCCCCc----chhhhhh-----ccCCCHHHHHHHhc--ceEEEEeec
Q 020843 156 LYRPPFHLMFNGSFEKAKDAASVQD-KWLLVNLQSTKEF----SSHMLNR-----DTWANEAVSQTIST--NFIFWQVYD 223 (320)
Q Consensus 156 lf~Ppf~~~~~gsf~~A~~~Ak~~~-K~LLV~l~~~~~f----~c~~lnR-----dvw~n~~V~~~l~~--nFV~~q~d~ 223 (320)
+-.+|+.+-...+..+|++.-.+.+ ..+.| +-....+ .-..+-+ ..+.+..|.+++.. +++....+.
T Consensus 22 im~~~~~v~~~~~~~~a~~~m~~~~~~~~~V-vd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~ 100 (159)
T 3fv6_A 22 FQSIPVVIHENVSVYDAICTMFLEDVGTLFV-VDRDAVLVGVLSRKDLLRASIGQQELTSVPVHIIMTRMPNITVCRRED 100 (159)
T ss_dssp SCBCCCEEETTSBHHHHHHHHHHHTCSEEEE-ECTTSCEEEEEEHHHHHHHHTSCSCTTTCBGGGTSEETTSCCCBCTTS
T ss_pred HcCCCEEECCCCcHHHHHHHHHHCCCCEEEE-EcCCCcEEEEEeHHHHHHHhhccCcccCcCHHHHHcCCCCcEEECCCC
Confidence 3345553334568999998876654 33333 3322222 1122222 23345567777765 665544444
Q ss_pred CChHHHHHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhcCCCccc
Q 020843 224 DTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDGGPREQH 282 (320)
Q Consensus 224 ~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~~~~d~~ 282 (320)
.-.+..++...+ .+.++.|+|. .|.. .++.|.++..+++..+.+.....+...+
T Consensus 101 ~l~~a~~~m~~~---~~~~lpVvd~-~g~~-~~~vGiit~~dil~~l~~~~~~~~~~~~ 154 (159)
T 3fv6_A 101 YVMDIAKHLIEK---QIDALPVIKD-TDKG-FEVIGRVTKTNMTKILVSLSENEILLQH 154 (159)
T ss_dssp BHHHHHHHHHHH---TCSEEEEEEE-CSSS-EEEEEEEEHHHHHHHHHHHHTTCCC---
T ss_pred CHHHHHHHHHHc---CCcEEEEEeC-CCcc-eeEEEEEEHHHHHHHHHHHhhcchhhhh
Confidence 445566666555 5778889995 3410 0245778899999999999988766543
No 354
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=62.47 E-value=5.9 Score=33.31 Aligned_cols=44 Identities=9% Similarity=0.015 Sum_probs=29.8
Q ss_pred CeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhc--ceEEEEeecC
Q 020843 181 KWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIST--NFIFWQVYDD 224 (320)
Q Consensus 181 K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~--nFV~~q~d~~ 224 (320)
++.+|.|.+.||+.|..|...+=..+.+.+.+.. +|++..+...
T Consensus 15 ~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 60 (189)
T 3l9v_A 15 APAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQGSRMVKYHVSLL 60 (189)
T ss_dssp CCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCTTCCEEEEECSSS
T ss_pred CCEEEEEECCCChhHHHHhHhccchHHHHHhCCCCCEEEEEechhc
Confidence 6789999999999999998664012455554433 4666666653
No 355
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=62.16 E-value=21 Score=26.06 Aligned_cols=56 Identities=9% Similarity=0.051 Sum_probs=32.0
Q ss_pred EEeCCCCcchhhhhhccCCCHHHHHHHhcc-eEEEEeecCC-hHH-HHHHHHcC--CCCCcEEEE
Q 020843 186 NLQSTKEFSSHMLNRDTWANEAVSQTISTN-FIFWQVYDDT-SEG-KKVCTYYK--LDSIPVVLV 245 (320)
Q Consensus 186 ~l~~~~~f~c~~lnRdvw~n~~V~~~l~~n-FV~~q~d~~s-~eg-~~~~~~Y~--v~~~P~i~I 245 (320)
-+..++|+.|....+ ...++++|+++ .-+-.+|++. ++. ..+...++ ..++|.|+|
T Consensus 6 ly~~~~C~~c~~~~~----~~~ak~~L~~~~i~~~~~di~~~~~~~~~l~~~~g~~~~~vP~ifi 66 (93)
T 1t1v_A 6 VYSTSVTGSREIKSQ----QSEVTRILDGKRIQYQLVDISQDNALRDEMRTLAGNPKATPPQIVN 66 (93)
T ss_dssp EEECSSCSCHHHHHH----HHHHHHHHHHTTCCCEEEETTSCHHHHHHHHHHTTCTTCCSCEEEE
T ss_pred EEEcCCCCCchhhHH----HHHHHHHHHHCCCceEEEECCCCHHHHHHHHHHhCCCCCCCCEEEE
Confidence 345688999953321 23456666653 2233445543 343 45666777 679998853
No 356
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=59.87 E-value=17 Score=30.39 Aligned_cols=42 Identities=19% Similarity=0.230 Sum_probs=32.1
Q ss_pred HHHHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 228 GKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 228 g~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
..++++.+++.++|+++| +|+.+ +.|. +++.|++.|...+++
T Consensus 143 ~~~~a~~~gv~gtPt~vv----ng~~~--~~~~-~~e~l~~~i~~ll~k 184 (193)
T 3hz8_A 143 MQELTETFQIDGVPTVIV----GGKYK--VEFA-DWESGMNTIDLLADK 184 (193)
T ss_dssp HHHHHHHTTCCSSSEEEE----TTTEE--ECCS-SHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCcCCEEEE----CCEEE--ecCC-CHHHHHHHHHHHHHH
Confidence 355777899999999986 46654 2344 999999999888865
No 357
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=59.84 E-value=67 Score=27.75 Aligned_cols=100 Identities=10% Similarity=0.101 Sum_probs=57.0
Q ss_pred CCCccccccccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCC
Q 020843 158 RPPFHLMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKL 237 (320)
Q Consensus 158 ~Ppf~~~~~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v 237 (320)
.||...+ .+-+++.+.-.....|++.+|.+..+..+..| ..+.+.++.++.|+... + ..++..|++
T Consensus 5 gP~v~~l--~s~~~~~~~l~~~~v~vvgff~~~~~~~~~~f-------~~~A~~lr~~~~F~~~~--~---~~v~~~~~~ 70 (252)
T 2h8l_A 5 SPASVPL--RTEEEFKKFISDKDASIVGFFDDSFSEAHSEF-------LKAASNLRDNYRFAHTN--V---ESLVNEYDD 70 (252)
T ss_dssp -CCEEEC--CSHHHHHHHHTSSSCEEEEEESCTTSHHHHHH-------HHHHHHTTTTSCEEEEC--C---HHHHHHHCS
T ss_pred CCCceee--cCHHHHHHHhhcCCeEEEEEECCCCChHHHHH-------HHHHHhcccCcEEEEEC--h---HHHHHHhCC
Confidence 3554332 24444444333445566666654333444444 45677777888887773 2 347888998
Q ss_pred CCCcEEEEEecCC-----CceEEEE-ecCCChHHHHHHHHH
Q 020843 238 DSIPVVLVVDPIT-----GQKMRSW-CGMVQPESLLEDLVP 272 (320)
Q Consensus 238 ~~~P~i~Iidp~t-----G~~v~~~-~G~~~~~~fl~~L~~ 272 (320)
.. |.|+++-|.. .+....+ .|..+.+++.+-+..
T Consensus 71 ~~-p~i~~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~ 110 (252)
T 2h8l_A 71 NG-EGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQE 110 (252)
T ss_dssp SS-EEEEEECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHH
T ss_pred CC-CcEEEEcchhhcccccccccccCCCCcCHHHHHHHHHh
Confidence 86 9999887621 1222345 676777765544444
No 358
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=59.59 E-value=7.1 Score=32.93 Aligned_cols=57 Identities=2% Similarity=-0.244 Sum_probs=33.2
Q ss_pred cCCeEEEEEeC-CCCcchhhhhhccCCCHHHHHHHhcce-EEEEeecCChHH-HHHHHHcCC
Q 020843 179 QDKWLLVNLQS-TKEFSSHMLNRDTWANEAVSQTISTNF-IFWQVYDDTSEG-KKVCTYYKL 237 (320)
Q Consensus 179 ~~K~LLV~l~~-~~~f~c~~lnRdvw~n~~V~~~l~~nF-V~~q~d~~s~eg-~~~~~~Y~v 237 (320)
.+||++++|+- .+++.|..--+.. ++...++-+.+. .++.+..+++.. .++++.+++
T Consensus 41 ~gk~vVL~fyP~~fTp~Ct~e~~~f--~~~~~ef~~~gv~~VigIS~D~~~~~~~w~~~~~~ 100 (171)
T 2xhf_A 41 RGRKGILFSVVGAFVPGSNNHIPEY--LSLYDKFKEEGYHTIACIAVNDPFVMAAWGKTVDP 100 (171)
T ss_dssp TTSEEEEEECSCTTCTTTTSSHHHH--HHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHHCT
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHH--HHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcCC
Confidence 57899999984 4688874321111 122334444567 488888887653 345555543
No 359
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=58.56 E-value=23 Score=27.10 Aligned_cols=55 Identities=11% Similarity=0.077 Sum_probs=31.8
Q ss_pred EEeCCCCcchhhhhhccCCCHHHHHHHhcc-eEEEEeecCC-hHHHH-HHHHc--------CCCCCcEEE
Q 020843 186 NLQSTKEFSSHMLNRDTWANEAVSQTISTN-FIFWQVYDDT-SEGKK-VCTYY--------KLDSIPVVL 244 (320)
Q Consensus 186 ~l~~~~~f~c~~lnRdvw~n~~V~~~l~~n-FV~~q~d~~s-~eg~~-~~~~Y--------~v~~~P~i~ 244 (320)
-+..++|+.|....+ ...++++|+++ .=+-.+|++. ++..+ +...+ +..++|.|+
T Consensus 12 vy~~~~C~~C~~~~~----~~~ak~~L~~~gi~y~~vdI~~~~~~~~~l~~~~~~~~~~~~g~~tvP~vf 77 (111)
T 2ct6_A 12 VFIASSSGFVAIKKK----QQDVVRFLEANKIEFEEVDITMSEEQRQWMYKNVPPEKKPTQGNPLPPQIF 77 (111)
T ss_dssp EEECSSCSCHHHHHH----HHHHHHHHHHTTCCEEEEETTTCHHHHHHHHHSCCTTTCCSSSSCCSCEEE
T ss_pred EEEcCCCCCcccchh----HHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHhcccccccCCCCCCCEEE
Confidence 345688999974321 13566777753 2234455543 44443 55554 566899886
No 360
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=54.53 E-value=6.6 Score=32.40 Aligned_cols=41 Identities=10% Similarity=0.187 Sum_probs=29.1
Q ss_pred HHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHh
Q 020843 231 VCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 231 ~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld 275 (320)
.++.+++.++|+++| + |+.+....|..+++.|.+.|...+.
T Consensus 154 ~a~~~gv~gtPt~~i-n---g~~~~~~~g~~~~~~l~~~i~~~l~ 194 (195)
T 3c7m_A 154 SYDVAKIQGVPAYVV-N---GKYLIYTKSIKSIDAMADLIRELAS 194 (195)
T ss_dssp HHHHHHHHCSSEEEE-T---TTEEECGGGCCCHHHHHHHHHHHHT
T ss_pred HHHHcCCCccCEEEE-C---CEEEeccCCCCCHHHHHHHHHHHHh
Confidence 445667889999755 3 6543222387899999999988764
No 361
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=53.88 E-value=27 Score=27.93 Aligned_cols=65 Identities=9% Similarity=0.177 Sum_probs=44.4
Q ss_pred CHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhcC
Q 020843 205 NEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDGG 277 (320)
Q Consensus 205 n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~~ 277 (320)
+..|.+++..+++.+..+..=.+..++. .-..+.++.|+|. .|+. .|.++..+++..+.......
T Consensus 97 ~~~v~~~m~~~~~~v~~~~~l~~a~~~m---~~~~~~~lpVvd~-~g~~----vGiit~~dil~~~~~~~~~~ 161 (180)
T 3sl7_A 97 GKVVGDLMTPSPLVVRDSTNLEDAARLL---LETKFRRLPVVDA-DGKL----IGILTRGNVVRAALQIKRNA 161 (180)
T ss_dssp TCBHHHHSEESCCCEETTSBHHHHHHHH---TTSTTCEEEEECT-TCBE----EEEEEHHHHHHHHHHHHHTC
T ss_pred cccHHHHhCCCceEeCCCCcHHHHHHHH---HHcCCCEEEEECC-CCeE----EEEEEHHHHHHHHHHHhhhh
Confidence 4568888888776665544444444444 3446788999995 4644 46678899999888876653
No 362
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=53.46 E-value=35 Score=26.19 Aligned_cols=102 Identities=9% Similarity=0.097 Sum_probs=60.0
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccC----------------------CCHHHHHHHhcceEEEEeec
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTW----------------------ANEAVSQTISTNFIFWQVYD 223 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw----------------------~n~~V~~~l~~nFV~~q~d~ 223 (320)
..+..+|++.-.+.+-.-++.+.....+---.-.+|+. .+..|.+++...++.+..+.
T Consensus 23 ~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~ 102 (152)
T 4gqw_A 23 TTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLSKTNGKLVGDLMTPAPLVVEEKT 102 (152)
T ss_dssp TSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTCC----CCHHHHHHHTC-----CCBHHHHSEESCCCEESSS
T ss_pred CCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHhhcccCcccchHHHHHHHHHhccccHHHhcCCCceEECCCC
Confidence 45888998887765543333333332222111112222 23568888888777766655
Q ss_pred CChHHHHHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHh
Q 020843 224 DTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 224 ~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld 275 (320)
.=.+..++...+ .+.++.|+|. .|+ +.|.++..+++..+.+...
T Consensus 103 ~l~~a~~~~~~~---~~~~l~Vvd~-~g~----~~Giit~~dil~~~~~~~~ 146 (152)
T 4gqw_A 103 NLEDAAKILLET---KYRRLPVVDS-DGK----LVGIITRGNVVRAALQIKR 146 (152)
T ss_dssp BHHHHHHHHHHS---SCCEEEEECT-TSB----EEEEEEHHHHHHHHHC---
T ss_pred cHHHHHHHHHHC---CCCEEEEECC-CCc----EEEEEEHHHHHHHHHhccc
Confidence 556666666655 5678888985 464 4466778888888765443
No 363
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=52.16 E-value=34 Score=29.89 Aligned_cols=42 Identities=10% Similarity=0.142 Sum_probs=33.4
Q ss_pred HHHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 229 KKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 229 ~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
.+.+..+++.++|+++| +|+. .+.|..+++.|.+.|.+.+..
T Consensus 173 ~~~a~~~Gv~GvPtfvv----~g~~--~v~Ga~~~e~~~~~i~~~~~~ 214 (239)
T 3gl5_A 173 EREAAQLGATGVPFFVL----DRAY--GVSGAQPAEVFTQALTQAWGE 214 (239)
T ss_dssp HHHHHHTTCCSSSEEEE----TTTE--EEESSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHCCCCeeCeEEE----CCcE--eecCCCCHHHHHHHHHHHHhh
Confidence 34556789999999986 3542 357999999999999999885
No 364
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=51.23 E-value=11 Score=31.85 Aligned_cols=38 Identities=11% Similarity=0.132 Sum_probs=30.7
Q ss_pred HHHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHH
Q 020843 229 KKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDL 270 (320)
Q Consensus 229 ~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L 270 (320)
.++++.++|.+.|+++| +|+.+..+.|..++++|.+.|
T Consensus 144 ~~~a~~~GV~gtPtf~i----ng~~~~~~s~~~~~e~w~~~l 181 (182)
T 3gn3_A 144 TKYARQNGIHVSPTFMI----NGLVQPGMSSGDPVSKWVSDI 181 (182)
T ss_dssp HHHHHHHTCCSSSEEEE----TTEECTTCCTTSCHHHHHHHH
T ss_pred HHHHHHCCCCccCEEEE----CCEEccCCCCCCCHHHHHHHh
Confidence 45777889999999986 477765678889999998876
No 365
>1p3q_Q VPS9P, vacuolar protein sorting-associated protein VPS9; trafficking, post translational modification, mono- ubiquitination; 1.70A {Saccharomyces cerevisiae} SCOP: a.5.2.4 PDB: 1mn3_A
Probab=51.22 E-value=6.1 Score=27.36 Aligned_cols=41 Identities=2% Similarity=0.117 Sum_probs=32.1
Q ss_pred chHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhc
Q 020843 9 DKQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYV 49 (320)
Q Consensus 9 ~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~ 49 (320)
++.+.+.++.++=-.-|.++=+..|++++|+++.||+..++
T Consensus 11 e~~~~~~~L~~MFP~lD~evI~~Vl~a~~G~~~~~IdaLLq 51 (54)
T 1p3q_Q 11 ERKDTLNTLQNMFPDMDPSLIEDVCIAAASRIGPCVDALLS 51 (54)
T ss_dssp HHHHHHHHHHHHSTTSCHHHHHHHHHHSCC--CGGGC----
T ss_pred HHHHHHHHHHHHcccCCHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 46788999999978899999999999999999999987765
No 366
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=51.18 E-value=86 Score=24.49 Aligned_cols=89 Identities=10% Similarity=0.088 Sum_probs=55.3
Q ss_pred ccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEE
Q 020843 167 GSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVV 246 (320)
Q Consensus 167 gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Ii 246 (320)
.+.+++.+ ..+.++.++|-|..+||.+|... | ..+.+-+ +.+-|...+. ..++..|++. .|.|.++
T Consensus 27 ~s~~e~e~-fi~~~~v~VVGfF~~~~~~~~~~----F--~~~A~~~-~d~~F~~t~~-----~~v~~~~~v~-~~~vvlf 92 (124)
T 2l4c_A 27 TDVPAAME-FIAATEVAVIGFFQDLEIPAVPI----L--HSMVQKF-PGVSFGISTD-----SEVLTHYNIT-GNTICLF 92 (124)
T ss_dssp CSHHHHHH-HHHTSSEEEEEECSCTTSTHHHH----H--HHHHHHC-TTSEEEEECC-----HHHHHHTTCC-SSCEEEE
T ss_pred CCHHHHHH-HHhcCCCEEEEEECCCCChhHHH----H--HHHHHhC-CCceEEEECh-----HHHHHHcCCC-CCeEEEE
Confidence 45554433 33567888888888888877221 1 3445555 6777766643 3477889987 8999998
Q ss_pred ecCCCceEEEEec----CCChHHHHHHH
Q 020843 247 DPITGQKMRSWCG----MVQPESLLEDL 270 (320)
Q Consensus 247 dp~tG~~v~~~~G----~~~~~~fl~~L 270 (320)
-+- .+....+.| ..+.+++.+-+
T Consensus 93 kkf-de~~~~~~g~~~~~~~~~~L~~FI 119 (124)
T 2l4c_A 93 RLV-DNEQLNLEDEDIESIDATKLSRFI 119 (124)
T ss_dssp ETT-TTEEEEECHHHHTTCCHHHHHHHH
T ss_pred EcC-CCCceeecCcccCCCCHHHHHHHH
Confidence 863 234445665 56776654433
No 367
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=50.65 E-value=53 Score=25.98 Aligned_cols=102 Identities=13% Similarity=0.080 Sum_probs=60.2
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCCCC----cchhhhhh-------------ccCCCHHHHHHHhcceEEEEeecCChHH
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQSTKE----FSSHMLNR-------------DTWANEAVSQTISTNFIFWQVYDDTSEG 228 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~~~----f~c~~lnR-------------dvw~n~~V~~~l~~nFV~~q~d~~s~eg 228 (320)
..+..+|++.-++.+--.++.+-.... ..-..+-+ ..+.+..|.+++..+++....+..=.+.
T Consensus 21 ~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a 100 (160)
T 2o16_A 21 THTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQRSAQGDSLAFETPLFEVMHTDVTSVAPQAGLKES 100 (160)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHCC---------CCCBHHHHSCSCEEEBCTTSBHHHH
T ss_pred CCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHHhhcccccccchhcccCHHHHhcCCCeEECCCCCHHHH
Confidence 458888888776554322222222221 11111211 2345667888888777766655555666
Q ss_pred HHHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 229 KKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 229 ~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
.++....+ +..+.|+|. |+ +.|.++..+++..+.+.++.
T Consensus 101 ~~~m~~~~---~~~lpVvd~--g~----lvGiit~~dil~~~~~~~~~ 139 (160)
T 2o16_A 101 AIYMQKHK---IGCLPVVAK--DV----LVGIITDSDFVTIAINLLEL 139 (160)
T ss_dssp HHHHHHTT---CSCEEEEET--TE----EEEEECHHHHHHHHHHHHHH
T ss_pred HHHHHHhC---CCEEEEEEC--CE----EEEEEEHHHHHHHHHHHhcc
Confidence 66666654 566778884 63 45778889999888877653
No 368
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=48.76 E-value=25 Score=29.83 Aligned_cols=110 Identities=8% Similarity=0.026 Sum_probs=68.7
Q ss_pred CCCccccc-cccHHHHHHHHHhcC--CeEEEEEeCC-CCcchhhhhhccC---CCHHHHHHHhcceEEEEeecCChHHHH
Q 020843 158 RPPFHLMF-NGSFEKAKDAASVQD--KWLLVNLQST-KEFSSHMLNRDTW---ANEAVSQTISTNFIFWQVYDDTSEGKK 230 (320)
Q Consensus 158 ~Ppf~~~~-~gsf~~A~~~Ak~~~--K~LLV~l~~~-~~f~c~~lnRdvw---~n~~V~~~l~~nFV~~q~d~~s~eg~~ 230 (320)
.|.+..+. ..+..+|++.-++.. +.-.+++.+. ..+---.--++++ .+..|.+++..+++++..+.+-.+..+
T Consensus 61 ~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~~~~~~v~~im~~~~~~v~~~~~l~~a~~ 140 (205)
T 3kxr_A 61 DHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKHEPHEPLISLLSEDSRALTANTTLLDAAE 140 (205)
T ss_dssp BCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTSCTTSBGGGGCCSSCCCEETTSCHHHHHH
T ss_pred cCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhCCCcchHHHHhcCCCeEECCCCCHHHHHH
Confidence 45554443 459999999887730 2222333333 2222222233443 244688888888888877776677777
Q ss_pred HHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHh
Q 020843 231 VCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 231 ~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld 275 (320)
+...| .+..+.|||. .|+. .|.++.+++++.+.+-.+
T Consensus 141 ~m~~~---~~~~lpVVD~-~g~l----vGiIT~~Dil~~i~~e~~ 177 (205)
T 3kxr_A 141 AIEHS---REIELPVIDD-AGEL----IGRVTLRAATALVREHYE 177 (205)
T ss_dssp HHHTS---SCSEEEEECT-TSBE----EEEEEHHHHHHHHHHHHC
T ss_pred HHHhc---CCCEEEEEcC-CCeE----EEEEEHHHHHHHHHHHHH
Confidence 77777 5677888995 4644 466778889888876554
No 369
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=48.46 E-value=41 Score=27.88 Aligned_cols=45 Identities=13% Similarity=0.177 Sum_probs=27.2
Q ss_pred HHHHHHHcCCCCCcEEEEEecCCCceEEEEecCCCh------HHHHHHHHHHHhc
Q 020843 228 GKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQP------ESLLEDLVPFMDG 276 (320)
Q Consensus 228 g~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~------~~fl~~L~~fld~ 276 (320)
..+.++.+++.++|+++| +|+.+..-.|..+. +.+++.+...+.+
T Consensus 134 ~~~~a~~~gv~GtPt~~v----ng~~~v~~~~~~~~~~~~~~~~~~~~i~~Li~k 184 (189)
T 3l9v_A 134 QERLFKEYGVRGTPSVYV----RGRYHINNAAFGAFSVENFRSRYAAVVRKLLAG 184 (189)
T ss_dssp HHHHHHHTTCCSSSEEEE----TTTEEECGGGCCCSSHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHhCCCccCEEEE----CCEEEECccccccccccchHHHHHHHHHHHHhC
Confidence 345677899999999996 46554221222233 5666655555543
No 370
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=48.10 E-value=40 Score=25.57 Aligned_cols=99 Identities=10% Similarity=0.109 Sum_probs=58.1
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCCCCcc----hhhh-----hhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcC
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQSTKEFS----SHML-----NRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYK 236 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~----c~~l-----nRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~ 236 (320)
..+..+|++.-.+.+.--++.+.....+- -..+ ....+.+..|.+++..+++.+..+..=.+..++. .
T Consensus 24 ~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~---~ 100 (138)
T 2p9m_A 24 HEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRDKYTLETTIGDVMTKDVITIHEDASILEAIKKM---D 100 (138)
T ss_dssp TSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTTTCCCSSCBHHHHSCSSCCCEETTSBHHHHHHHH---T
T ss_pred CCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHhhcccCCcCHHHHhCCCcEEECCCCCHHHHHHHH---H
Confidence 45899998887665543333333232221 1122 2234567789999888777666554444544444 3
Q ss_pred CCC-----CcEEEEEecCCCceEEEEecCCChHHHHHHHHH
Q 020843 237 LDS-----IPVVLVVDPITGQKMRSWCGMVQPESLLEDLVP 272 (320)
Q Consensus 237 v~~-----~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~ 272 (320)
-.. +.++.|+|. .|+. .|.++..+++..+.+
T Consensus 101 ~~~~~~~~~~~l~Vvd~-~g~~----~Giit~~dll~~~~~ 136 (138)
T 2p9m_A 101 ISGKKEEIINQLPVVDK-NNKL----VGIISDGDIIRTISK 136 (138)
T ss_dssp CC-----CCCEEEEECT-TSBE----EEEEEHHHHHHHHHH
T ss_pred hcCCccccccEEEEECC-CCeE----EEEEEHHHHHHHHHh
Confidence 345 778899995 4644 466777888876654
No 371
>2cos_A Serine/threonine protein kinase LATS2; UBA domain, structure genomics, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1
Probab=46.25 E-value=24 Score=24.29 Aligned_cols=39 Identities=18% Similarity=0.277 Sum_probs=32.4
Q ss_pred cchHHHHHhhhccccCCCHHHHHHHHHHcCC-CHHHHHHHHh
Q 020843 8 NDKQSMVSSFLEIAVGQTAETAVQFLQATSW-KLDEAIQLFY 48 (320)
Q Consensus 8 ~~~~~~i~~F~~iTt~~~~~~A~~~Le~~~w-dLe~Av~~ff 48 (320)
....+.+++.+++ |.+.+.|..-|+.+|. .|+.|++-..
T Consensus 7 ~vn~qmlq~L~eM--GFd~erae~Alk~Tg~~Gle~AmewL~ 46 (54)
T 2cos_A 7 GVNRQMLQELVNA--GCDQEMAGRALKQTGSRSIEAALEYIS 46 (54)
T ss_dssp SCCHHHHHHHHHH--HCCHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred hhHHHHHHHHHHc--CCCHHHHHHHHHHhCcccHHHHHHHHH
Confidence 3456779999999 9999999999999985 5999987543
No 372
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=44.82 E-value=38 Score=26.93 Aligned_cols=57 Identities=14% Similarity=0.094 Sum_probs=36.7
Q ss_pred EEEEEeCCCCcchhhhhhccCCCHHHHHHHhcc-eEEEEeecC-ChHH-HHHHHHc--------CCCCCcEEE
Q 020843 183 LLVNLQSTKEFSSHMLNRDTWANEAVSQTISTN-FIFWQVYDD-TSEG-KKVCTYY--------KLDSIPVVL 244 (320)
Q Consensus 183 LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~n-FV~~q~d~~-s~eg-~~~~~~Y--------~v~~~P~i~ 244 (320)
|.||. ++.|+.|....+ ...++.+|+.+ .-|-.+|++ +++. ..+.+.+ +..++|-|+
T Consensus 2 V~vYt-t~~c~~c~~kk~----c~~aK~lL~~kgV~feEidI~~d~~~r~eM~~~~~~~~~~~~G~~tvPQIF 69 (121)
T 1u6t_A 2 IRVYI-ASSSGSTAIKKK----QQDVLGFLEANKIGFEEKDIAANEENRKWMRENVPENSRPATGYPLPPQIF 69 (121)
T ss_dssp EEEEE-CTTCSCHHHHHH----HHHHHHHHHHTTCCEEEEECTTCHHHHHHHHHHSCGGGSCSSSSCCSCEEE
T ss_pred EEEEe-cCCCCCccchHH----HHHHHHHHHHCCCceEEEECCCCHHHHHHHHHhccccccccCCCcCCCEEE
Confidence 44554 567999976653 35788999764 345566775 3444 4566677 556778666
No 373
>2lbc_A Ubiquitin carboxyl-terminal hydrolase 13; tandem UBA of USP13; NMR {Homo sapiens}
Probab=44.25 E-value=18 Score=28.70 Aligned_cols=41 Identities=22% Similarity=0.161 Sum_probs=35.7
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCC-CHHHHHHHHhcCCC
Q 020843 10 KQSMVSSFLEIAVGQTAETAVQFLQATSW-KLDEAIQLFYVGNE 52 (320)
Q Consensus 10 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~w-dLe~Av~~ff~~~~ 52 (320)
..+.|.+++++ |=+...|+.-|..+++ |++.|++-.++..+
T Consensus 3 d~~~l~~L~~M--GF~~~~a~~AL~~t~n~~~e~A~~wL~~~~~ 44 (126)
T 2lbc_A 3 DESSVMQLAEM--GFPLEACRKAVYFTGNMGAEVAFNWIIVHME 44 (126)
T ss_dssp CTHHHHHHHTT--SSCCHHHHHHHHHHTSCCHHHHHHHHHHGGG
T ss_pred CHHHHHHHHHc--CCCHHHHHHHHHHcCCCCHHHHHHHHHHhcc
Confidence 35788999998 9999999999999976 99999998887644
No 374
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=43.03 E-value=45 Score=24.69 Aligned_cols=96 Identities=11% Similarity=0.093 Sum_probs=56.7
Q ss_pred ccccHHHHHHHHHhcC-CeEEEEEeCCCCc----chhhhhh-----ccCCCHHHHHHHhcceEEEEeecCChHHHHHHHH
Q 020843 165 FNGSFEKAKDAASVQD-KWLLVNLQSTKEF----SSHMLNR-----DTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTY 234 (320)
Q Consensus 165 ~~gsf~~A~~~Ak~~~-K~LLV~l~~~~~f----~c~~lnR-----dvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~ 234 (320)
...+..+|++.-.+.+ .++.| +- ...+ .-..+-+ .-+.+..|.+++..+++....+..=.+..++...
T Consensus 16 ~~~~~~~a~~~~~~~~~~~~~V-vd-~~~~~G~it~~dl~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~ 93 (125)
T 1pbj_A 16 ITASLEDVLRNYVENAKGSSVV-VK-EGVRVGIVTTWDVLEAIAEGDDLAEVKVWEVMERDLVTISPRATIKEAAEKMVK 93 (125)
T ss_dssp TTCBHHHHHHHHHHHCCCEEEE-EE-TTEEEEEEEHHHHHHHHHHTCCTTTSBHHHHCBCGGGEECTTSCHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHcCCCEEEE-Ee-CCeeEEEEeHHHHHHHHhcCCcccccCHHHHcCCCCeEECCCCCHHHHHHHHHh
Confidence 3558999988876644 33333 22 2211 1111111 1124667888888777776666555666666666
Q ss_pred cCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHH
Q 020843 235 YKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLV 271 (320)
Q Consensus 235 Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~ 271 (320)
+ .+.++.|++. |+ +.|.++..+++..|.
T Consensus 94 ~---~~~~l~Vvd~--~~----~~Gvit~~dl~~~l~ 121 (125)
T 1pbj_A 94 N---VVWRLLVEED--DE----IIGVISATDILRAKM 121 (125)
T ss_dssp H---TCSEEEEEET--TE----EEEEEEHHHHHHHHC
T ss_pred c---CCcEEEEEEC--CE----EEEEEEHHHHHHHHH
Confidence 6 4667788884 64 456677788777653
No 375
>1q02_A Sequestosome 1; helical bundle, protein binding; NMR {Homo sapiens} SCOP: a.5.2.1 PDB: 2jy7_A 2jy8_A 2k0b_X 2knv_A 2rru_A 3b0f_A
Probab=41.81 E-value=16 Score=24.98 Aligned_cols=35 Identities=20% Similarity=0.408 Sum_probs=27.9
Q ss_pred HHHHHhhhccccCCCHHHH--HHHHHHcCCCHHHHHHHH
Q 020843 11 QSMVSSFLEIAVGQTAETA--VQFLQATSWKLDEAIQLF 47 (320)
Q Consensus 11 ~~~i~~F~~iTt~~~~~~A--~~~Le~~~wdLe~Av~~f 47 (320)
.+.|.|.+++ |-+.+-+ .++|+..++|+..|++..
T Consensus 11 ~~al~qMl~M--GF~negGWLt~LL~~k~gDI~~aLD~l 47 (52)
T 1q02_A 11 IESLSQMLSM--GFSDEGGWLTRLLQTKNYDIGAALDTI 47 (52)
T ss_dssp HHHHHHHHTT--TCCCTTSHHHHHHHHTTTCHHHHHHHH
T ss_pred HHHHHHHHHc--CCCccccHHHHHHHHccCCHHHHHHHh
Confidence 5678888888 4444444 699999999999999876
No 376
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=41.34 E-value=24 Score=29.39 Aligned_cols=41 Identities=7% Similarity=-0.116 Sum_probs=27.0
Q ss_pred CCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeec
Q 020843 180 DKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYD 223 (320)
Q Consensus 180 ~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~ 223 (320)
+|+.+|.|.+-+|+.|..+... + +.+.+-++-.|+.+.+..
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~-~--~~~~~~~~v~~~~~p~~~ 62 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENF-L--PVISQEAGTDIGKMHITF 62 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGG-H--HHHHHHHTSCCEEEECCS
T ss_pred CCCEEEEEECCCChhHHHhhHH-H--HHHHHHhCCeEEEEeccC
Confidence 6889999999999999999742 2 333333332455555543
No 377
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=40.30 E-value=26 Score=26.71 Aligned_cols=99 Identities=16% Similarity=0.139 Sum_probs=60.2
Q ss_pred cccHHHHHHHHHhcC-CeEEEEEeCCCCc----chhhh-----hhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHc
Q 020843 166 NGSFEKAKDAASVQD-KWLLVNLQSTKEF----SSHML-----NRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYY 235 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~-K~LLV~l~~~~~f----~c~~l-----nRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y 235 (320)
..+..+|++.-.+.+ ..+.| +-+...+ .-..+ .+..+.+..|.+++..+++....+..=.+..++...+
T Consensus 23 ~~~~~~a~~~~~~~~~~~~~V-vd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~ 101 (138)
T 2yzi_A 23 STSVQEASRLMMEFDVGSLVV-INDDGNVVGFFTKSDIIRRVIVPGLPYDIPVERIMTRNLITANVNTPLGEVLRKMAEH 101 (138)
T ss_dssp TSBHHHHHHHHHHHTCSEEEE-ECTTSCEEEEEEHHHHHHHTTTTCCCTTSBGGGTCBCSCCEEETTSBHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHcCCCEEEE-EcCCCcEEEEEeHHHHHHHHHhcCCcccCCHHHHhhCCCeEECCCCcHHHHHHHHHhc
Confidence 458889888776554 33333 3222222 12222 1222455678888887877777665556666666555
Q ss_pred CCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHH
Q 020843 236 KLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFM 274 (320)
Q Consensus 236 ~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fl 274 (320)
.++++ |+|. .|+ +.|.++..+++..+...+
T Consensus 102 ---~~~~l-Vvd~-~g~----~~Giit~~dil~~~~~~~ 131 (138)
T 2yzi_A 102 ---RIKHI-LIEE-EGK----IVGIFTLSDLLEASRRRL 131 (138)
T ss_dssp ---TCSEE-EEEE-TTE----EEEEEEHHHHHHHHHCCS
T ss_pred ---CCCEE-EECC-CCC----EEEEEEHHHHHHHHHHHH
Confidence 57888 9995 464 456677888887776543
No 378
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=39.51 E-value=37 Score=26.73 Aligned_cols=101 Identities=13% Similarity=0.118 Sum_probs=58.3
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCCCCcc----hhhhhhc----------cCCCHHHHHHHhcceEEEEeecCChHHHHH
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQSTKEFS----SHMLNRD----------TWANEAVSQTISTNFIFWQVYDDTSEGKKV 231 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~----c~~lnRd----------vw~n~~V~~~l~~nFV~~q~d~~s~eg~~~ 231 (320)
..+..+|++.-.+.+-.-+..+-....+- -..+-+- -+.+..|.+++..+++.+..+..-.+..++
T Consensus 32 ~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~ 111 (159)
T 1yav_A 32 GNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGLERIEFEKLDQITVEEVMLTDIPRLHINDPIMKGFGM 111 (159)
T ss_dssp TCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBCSSSBCGGGTTTSBHHHHSBCSCCEEETTSBHHHHHHH
T ss_pred CCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhhhcccchhhhccCCHHHhcCCCCceEcCCCCHHHHHHH
Confidence 45888888887765543333333222211 1112111 145677899998888777655444555444
Q ss_pred HHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 232 CTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 232 ~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
...+ +.+.|+|. .|+. .|.++..+++..+...+..
T Consensus 112 m~~~-----~~lpVvd~-~g~~----vGiit~~dil~~~~~~~~~ 146 (159)
T 1yav_A 112 VINN-----GFVCVEND-EQVF----EGIFTRRVVLKELNKHIRS 146 (159)
T ss_dssp TTTC-----SEEEEECT-TCBE----EEEEEHHHHHHHHHHHC--
T ss_pred HHhC-----CEEEEEeC-CCeE----EEEEEHHHHHHHHHHHHHh
Confidence 4333 33888885 4644 4667788888888776543
No 379
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=38.90 E-value=40 Score=28.16 Aligned_cols=41 Identities=12% Similarity=0.169 Sum_probs=31.6
Q ss_pred HHHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 229 KKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 229 ~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
.+.++.+++.++|+++| +|+ .+.|..+.+.|.+.|.+...+
T Consensus 157 ~~~a~~~Gv~G~Ptfvi----~g~---~~~G~~~~~~l~~~l~~~~~~ 197 (203)
T 2imf_A 157 THAAIERKVFGVPTMFL----GDE---MWWGNDRLFMLESAMGRLCRQ 197 (203)
T ss_dssp HHHHHHTTCCSSSEEEE----TTE---EEESGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCcCCEEEE----CCE---EEECCCCHHHHHHHHhccccc
Confidence 44566789999999887 365 357988899898888877644
No 380
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=38.33 E-value=15 Score=27.94 Aligned_cols=108 Identities=15% Similarity=0.129 Sum_probs=60.3
Q ss_pred hhcCCCccccc-cccHHHHHHHHHhcC-CeEEEEEeCCCCc----chhhhhhccCCC----HHHHHHHhcceEEEEeecC
Q 020843 155 SLYRPPFHLMF-NGSFEKAKDAASVQD-KWLLVNLQSTKEF----SSHMLNRDTWAN----EAVSQTISTNFIFWQVYDD 224 (320)
Q Consensus 155 ~lf~Ppf~~~~-~gsf~~A~~~Ak~~~-K~LLV~l~~~~~f----~c~~lnRdvw~n----~~V~~~l~~nFV~~q~d~~ 224 (320)
+...+++..+. ..+..+|++.-.+.+ .++.| +-. ..+ .-..+-+-+... ..|.+++..+++....+..
T Consensus 9 ~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V-vd~-~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~ 86 (128)
T 3gby_A 9 YLAETDYPVFTLGGSTADAARRLAASGCACAPV-LDG-ERYLGMVHLSRLLEGRKGWPTVKEKLGEELLETVRSYRPGEQ 86 (128)
T ss_dssp GGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEE-EET-TEEEEEEEHHHHHTTCSSSCCTTCBCCGGGCBCCCCBCTTSB
T ss_pred HhhcCCcceECCCCCHHHHHHHHHHCCCcEEEE-EEC-CEEEEEEEHHHHHHHHhhCCcccCcHHHHccCCCcEECCCCC
Confidence 33334443333 568999998877655 34433 222 221 112222211111 2366777767666555544
Q ss_pred ChHHHHHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHH
Q 020843 225 TSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVP 272 (320)
Q Consensus 225 s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~ 272 (320)
=.+..++...+ .++++.|+|. .|+. .|.++..+++..|.+
T Consensus 87 l~~~~~~~~~~---~~~~lpVvd~-~g~~----~Giit~~dll~~l~~ 126 (128)
T 3gby_A 87 LFDNLISVAAA---KCSVVPLADE-DGRY----EGVVSRKRILGFLAE 126 (128)
T ss_dssp GGGSHHHHHHC---SSSEEEEECT-TCBE----EEEEEHHHHHHHHHT
T ss_pred HHHHHHHHHhC---CCcEEEEECC-CCCE----EEEEEHHHHHHHHHh
Confidence 45666665555 5788999985 4654 466778888887754
No 381
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=38.00 E-value=15 Score=33.65 Aligned_cols=25 Identities=4% Similarity=-0.150 Sum_probs=21.7
Q ss_pred hcCCeEEEEEeCCCCcchhhhhhcc
Q 020843 178 VQDKWLLVNLQSTKEFSSHMLNRDT 202 (320)
Q Consensus 178 ~~~K~LLV~l~~~~~f~c~~lnRdv 202 (320)
..+|..++.|.++.|+.|++|.+++
T Consensus 145 ~~gk~~I~vFtDp~CPYCkkl~~~l 169 (273)
T 3tdg_A 145 ANKDKILYIVSDPMCPHCQKELTKL 169 (273)
T ss_dssp GGTTCEEEEEECTTCHHHHHHHHTH
T ss_pred CCCCeEEEEEECcCChhHHHHHHHH
Confidence 6788999999999999999996543
No 382
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=37.96 E-value=34 Score=25.84 Aligned_cols=101 Identities=8% Similarity=0.159 Sum_probs=56.6
Q ss_pred cccHHHHHHHHHhcC-CeEEEEEeCCCCc----chhhh----hhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcC
Q 020843 166 NGSFEKAKDAASVQD-KWLLVNLQSTKEF----SSHML----NRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYK 236 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~-K~LLV~l~~~~~f----~c~~l----nRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~ 236 (320)
..+..+|++.-.+.+ .++.|. - ...+ .-..+ ......+..|.+++..+++....+..=.+..+.....
T Consensus 20 ~~~~~~a~~~~~~~~~~~~~Vv-d-~~~~~Givt~~dl~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~- 96 (133)
T 2ef7_A 20 DAKLNDIAKVMTEKNIGSVIVV-D-GNKPVGIITERDIVKAIGKGKSLETKAEEFMTASLITIREDSPITGALALMRQF- 96 (133)
T ss_dssp TCBHHHHHHHHHHHTCSEEEEE-E-TTEEEEEEEHHHHHHHHHTTCCTTCBGGGTSEECCCCEETTSBHHHHHHHHHHH-
T ss_pred CCcHHHHHHHHHhcCCCEEEEE-E-CCEEEEEEcHHHHHHHHhcCCCcccCHHHHcCCCCEEECCCCCHHHHHHHHHHc-
Confidence 558999988776544 344332 2 2211 11111 1122234456666666665555544445666655555
Q ss_pred CCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 237 LDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 237 v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
.++++.|+|. .|+ +.|.++..+++..+.+.+++
T Consensus 97 --~~~~l~Vvd~-~g~----~~Giit~~dll~~~~~~~~~ 129 (133)
T 2ef7_A 97 --NIRHLPVVDD-KGN----LKGIISIRDITRAIDDMFET 129 (133)
T ss_dssp --TCSEEEEECT-TSC----EEEEEEHHHHHHHHHHHC--
T ss_pred --CCCEEEEECC-CCe----EEEEEEHHHHHHHHHHHHHH
Confidence 5778889985 464 45667888888888776553
No 383
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=37.94 E-value=23 Score=26.34 Aligned_cols=109 Identities=16% Similarity=0.101 Sum_probs=56.4
Q ss_pred hhcCCCccccc-cccHHHHHHHHHhcCCeEEEEEeCCCCcc----hhhhhhccC-CCHHHHHHHhcceEEEEeecCChHH
Q 020843 155 SLYRPPFHLMF-NGSFEKAKDAASVQDKWLLVNLQSTKEFS----SHMLNRDTW-ANEAVSQTISTNFIFWQVYDDTSEG 228 (320)
Q Consensus 155 ~lf~Ppf~~~~-~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~----c~~lnRdvw-~n~~V~~~l~~nFV~~q~d~~s~eg 228 (320)
++-.+++..+. ..+..+|++.-.+.+...+..+.....+- -..+-+-+. ....|.+++..+++....+..-.+.
T Consensus 5 ~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~~~v~~~~~~~~~~v~~~~~l~~~ 84 (122)
T 3kpb_A 5 DILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQNKKTIEEIMTRNVITAHEDEPVDHV 84 (122)
T ss_dssp HHCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHHTTCCBGGGTSBSSCCCEETTSBHHHH
T ss_pred HhhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHHhcccCHHHHhcCCCeEECCCCCHHHH
Confidence 33344444443 45899999887665433222222222211 111111000 1123555665666655555444566
Q ss_pred HHHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHH
Q 020843 229 KKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLV 271 (320)
Q Consensus 229 ~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~ 271 (320)
.++...+ .+.++.|+|. .|+. .|.++..+++..|.
T Consensus 85 ~~~~~~~---~~~~l~Vvd~-~g~~----~Givt~~dl~~~l~ 119 (122)
T 3kpb_A 85 AIKMSKY---NISGVPVVDD-YRRV----VGIVTSEDISRLFG 119 (122)
T ss_dssp HHHHHHH---TCSEEEEECT-TCBE----EEEEEHHHHHHHHC
T ss_pred HHHHHHh---CCCeEEEECC-CCCE----EEEEeHHHHHHHhh
Confidence 6665555 5678889985 4644 46667777777653
No 384
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=37.68 E-value=55 Score=27.33 Aligned_cols=31 Identities=23% Similarity=0.335 Sum_probs=21.3
Q ss_pred HHHHHHHcCCCCCcEEEEEecCCCceEEEEecCCC
Q 020843 228 GKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQ 262 (320)
Q Consensus 228 g~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~ 262 (320)
..+.++.+++.++|+++| +|+.+..-.|..+
T Consensus 140 ~~~~a~~~gv~gtPtfvv----nG~~~v~~~~~~~ 170 (191)
T 3l9s_A 140 QEKAAADLQLQGVPAMFV----NGKYQINPQGMDT 170 (191)
T ss_dssp HHHHHHHTTCCSSSEEEE----TTTEEECGGGSCC
T ss_pred HHHHHHHhCCcccCEEEE----CCEEEECccccCC
Confidence 345677899999999986 4776544445433
No 385
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=37.24 E-value=82 Score=27.97 Aligned_cols=113 Identities=15% Similarity=0.165 Sum_probs=70.1
Q ss_pred hhcCCCccccc-cccHHHHHHHHHhcC----CeEEEEEeCC-CCcchhhhhhccC---CCHHHHHHHhcceEEEEeecCC
Q 020843 155 SLYRPPFHLMF-NGSFEKAKDAASVQD----KWLLVNLQST-KEFSSHMLNRDTW---ANEAVSQTISTNFIFWQVYDDT 225 (320)
Q Consensus 155 ~lf~Ppf~~~~-~gsf~~A~~~Ak~~~----K~LLV~l~~~-~~f~c~~lnRdvw---~n~~V~~~l~~nFV~~q~d~~s 225 (320)
++-.+++..+. ..+..+|++.-++.+ +.=-+++.+. ..+---.--++++ .+..|.+++..+++.+..+.+-
T Consensus 141 ~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~~~~~~~v~~im~~~~~~v~~~~~l 220 (286)
T 2oux_A 141 AIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVNDDDTLIADILNERVISVHVGDDQ 220 (286)
T ss_dssp HHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTTSCTTSBHHHHSBSCCCCEETTSBH
T ss_pred HhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHcCCCCCcHHHHcCCCCeeecCCCCH
Confidence 33344444443 458999998887753 1111233332 2222212223333 3567999998888888887777
Q ss_pred hHHHHHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHh
Q 020843 226 SEGKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 226 ~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld 275 (320)
.+..++...|+ +.++.|+|. .|+. .|.++.++++..+.+-..
T Consensus 221 ~ea~~~m~~~~---~~~lpVVd~-~g~l----vGiIT~~Dil~~i~~e~~ 262 (286)
T 2oux_A 221 EDVAQTIRDYD---FLAVPVTDY-DDHL----LGIVTVDDIIDVIDDEAA 262 (286)
T ss_dssp HHHHHHHHHHT---CSEEEEECT-TCBE----EEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcC---CcEEEEEcC-CCeE----EEEEEHHHHHHHHHHHhH
Confidence 78888888884 566778885 4644 466778888888776543
No 386
>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A*
Probab=37.07 E-value=34 Score=31.39 Aligned_cols=42 Identities=17% Similarity=0.402 Sum_probs=33.1
Q ss_pred cchHHHHHhhhccc------cCCCHHHHHHHHHHcCCCHHHHHHHHhc
Q 020843 8 NDKQSMVSSFLEIA------VGQTAETAVQFLQATSWKLDEAIQLFYV 49 (320)
Q Consensus 8 ~~~~~~i~~F~~iT------t~~~~~~A~~~Le~~~wdLe~Av~~ff~ 49 (320)
.+++++|.+|.+.- -..|...-.+||.+++||++.|...+-.
T Consensus 37 ~~q~~~l~~lR~~l~~~~~~~~~dD~~LLRFLRArkfdv~kA~~mL~~ 84 (320)
T 3q8g_A 37 KEQEEALLQFRSILLEKNYKERLDDSTLLRFLRARKFDINASVEMFVE 84 (320)
T ss_dssp HHHHHHHHHHHHHHHHTTCCSSCSHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 34677888877541 3468889999999999999999998843
No 387
>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1
Probab=35.41 E-value=49 Score=29.52 Aligned_cols=41 Identities=15% Similarity=0.301 Sum_probs=32.5
Q ss_pred cchHHHHHhhhccc------cCCCHHHHHHHHHHcCCCHHHHHHHHh
Q 020843 8 NDKQSMVSSFLEIA------VGQTAETAVQFLQATSWKLDEAIQLFY 48 (320)
Q Consensus 8 ~~~~~~i~~F~~iT------t~~~~~~A~~~Le~~~wdLe~Av~~ff 48 (320)
.++++.|.+|.+.- -..|...-.+||.+++||++.|...+-
T Consensus 28 ~~q~~~l~~lr~~l~~~~~~~~~dd~~LlRFLrarkfdv~~A~~~l~ 74 (296)
T 1aua_A 28 SAQEKALAELRKLLEDAGFIERLDDSTLLRFLRARKFDVQLAKEMFE 74 (296)
T ss_dssp TTHHHHHHHHHHHHHHTTCCSSCSHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHHcCCCHHHHHHHHH
Confidence 34777888886531 246789999999999999999998873
No 388
>4dbg_B Ring finger protein 31; ubiquitin fold, ubiquitination, ligase; 2.71A {Homo sapiens}
Probab=35.16 E-value=26 Score=29.48 Aligned_cols=37 Identities=14% Similarity=0.102 Sum_probs=29.8
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHH
Q 020843 10 KQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLF 47 (320)
Q Consensus 10 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~f 47 (320)
+..++...++. +..+.+.+...|..+++|++.|+.+.
T Consensus 102 R~~K~~eL~s~-G~~~~~~~~~aL~~~~Gdv~~Al~eL 138 (162)
T 4dbg_B 102 RRRKVQELQSL-GFGPEEGSLQALFQHGGDVSRALTEL 138 (162)
T ss_dssp HHHHHHHHHHT-TCCGGGTHHHHHHHTTTCHHHHHHHH
T ss_pred HHHHHHHHHhc-CCchHHHHHHHHHHcCCcHHHHHHHH
Confidence 45677888888 78888888888888888888888764
No 389
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=34.83 E-value=31 Score=26.76 Aligned_cols=101 Identities=13% Similarity=0.120 Sum_probs=58.9
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCCCCc----chhhhhh----------ccCCCHHHHHHHhcceEEEEeecCChHHHHH
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQSTKEF----SSHMLNR----------DTWANEAVSQTISTNFIFWQVYDDTSEGKKV 231 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~~~f----~c~~lnR----------dvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~ 231 (320)
..+..+|++.-.+.+---+..+-..+.+ .-..+-+ ..+.+..|.+++..+++....+..-.+..++
T Consensus 33 ~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~ 112 (150)
T 3lqn_A 33 GNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGILGLERIEFERLEEMKVEQVMKQDIPVLKLEDSFAKALEM 112 (150)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHTBCSSSBCGGGGGGCBGGGTCBSSCCEEETTCBHHHHHHH
T ss_pred CCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHHHhhcccchhHHhcCCHHHHhcCCCceeCCCCCHHHHHHH
Confidence 4588888887765543222222222221 1111111 1234556777777777777666665677776
Q ss_pred HHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 232 CTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 232 ~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
....++ +.|+|. .|+. .|.++..+++..+.+.+..
T Consensus 113 ~~~~~~-----l~Vvd~-~g~~----~Giit~~dil~~l~~~~~~ 147 (150)
T 3lqn_A 113 TIDHPF-----ICAVNE-DGYF----EGILTRRAILKLLNKKVRQ 147 (150)
T ss_dssp HHHCSE-----EEEECT-TCBE----EEEEEHHHHHHHHHHHC--
T ss_pred HHhCCE-----EEEECC-CCcE----EEEEEHHHHHHHHHHHhHh
Confidence 666642 778884 4644 4667889999988877654
No 390
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=33.92 E-value=96 Score=23.17 Aligned_cols=95 Identities=15% Similarity=0.134 Sum_probs=53.9
Q ss_pred cccHHHHHHHHHhcCC-eEEEEEeCC-CCcc----hhhhhhc---cCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcC
Q 020843 166 NGSFEKAKDAASVQDK-WLLVNLQST-KEFS----SHMLNRD---TWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYK 236 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K-~LLV~l~~~-~~f~----c~~lnRd---vw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~ 236 (320)
..+..+|++.-.+.+. .+.| +... ..+- -..+-+- -+.+..|.++++. .+....+..-.+..++...+
T Consensus 21 ~~~~~~a~~~m~~~~~~~~pV-vd~~~~~~vGivt~~dl~~~~~~~~~~~~v~~~m~~-~~~v~~~~~l~~a~~~m~~~- 97 (127)
T 3nqr_A 21 NQTLDECLDVIIESAHSRFPV-ISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVLRT-AVVVPESKRVDRMLKEFRSQ- 97 (127)
T ss_dssp TCCHHHHHHHHHHHCCSEEEE-ESSSTTCEEEEEEGGGGGGGGSTTCCCCCHHHHCBC-CCEEETTCBHHHHHHHHHHT-
T ss_pred CCCHHHHHHHHHhCCCCEEEE-EcCCCCcEEEEEEHHHHHHHHhccCCCCCHHHHcCC-CeEECCCCcHHHHHHHHHhc-
Confidence 4588899888776543 3333 2322 2221 1122221 1355678999865 54444433334555555555
Q ss_pred CCCCcEEEEEecCCCceEEEEecCCChHHHHHHH
Q 020843 237 LDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDL 270 (320)
Q Consensus 237 v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L 270 (320)
.++++.|+|. .|+. .|.++..++++.|
T Consensus 98 --~~~~lpVvd~-~g~~----~Giit~~dll~~l 124 (127)
T 3nqr_A 98 --RYHMAIVIDE-FGGV----SGLVTIEDILELI 124 (127)
T ss_dssp --TCCEEEEECT-TSCE----EEEEEHHHHHHHC
T ss_pred --CCeEEEEEeC-CCCE----EEEEEHHHHHHHH
Confidence 6788889985 4654 4666777777765
No 391
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=33.54 E-value=2.3e+02 Score=24.27 Aligned_cols=68 Identities=10% Similarity=0.288 Sum_probs=40.2
Q ss_pred cHHHHHHHHHh-cCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEE
Q 020843 168 SFEKAKDAASV-QDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVV 246 (320)
Q Consensus 168 sf~~A~~~Ak~-~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Ii 246 (320)
+-+++.+.-+. ...|++-+|.+........| ..+.+-++..+.|+... + ..++..|++.. |.|++.
T Consensus 13 s~~~~~~~~~~~~~v~vVgff~~~~~~~~~~F-------~~~A~~lr~~~~F~~t~--~---~~v~~~~~v~~-p~ivlf 79 (250)
T 3ec3_A 13 TLKQVQEFLKDGDDVVILGVFQGVGDPGYLQY-------QDAANTLREDYKFHHTF--S---TEIAKFLKVSL-GKLVLM 79 (250)
T ss_dssp CHHHHHHHHHHCSSCEEEEECSCTTCHHHHHH-------HHHHHHHTTTCCEEEEC--C---HHHHHHHTCCS-SEEEEE
T ss_pred CHHHHHHHHhcCCCeEEEEEEcCCCchHHHHH-------HHHHHhhhcCcEEEEEC--c---HHHHHHcCCCC-CeEEEE
Confidence 44555443334 45555556554322222223 45677778888887763 2 24566788876 999988
Q ss_pred ec
Q 020843 247 DP 248 (320)
Q Consensus 247 dp 248 (320)
-|
T Consensus 80 k~ 81 (250)
T 3ec3_A 80 QP 81 (250)
T ss_dssp CC
T ss_pred ec
Confidence 76
No 392
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=31.97 E-value=75 Score=24.71 Aligned_cols=98 Identities=15% Similarity=0.172 Sum_probs=60.4
Q ss_pred ccccHHHHHHHHHhcC-CeEEEEEeCCCCc----chhhhhhcc------CCCHHHHHHHhcceEEEEeecCChHHHHHHH
Q 020843 165 FNGSFEKAKDAASVQD-KWLLVNLQSTKEF----SSHMLNRDT------WANEAVSQTISTNFIFWQVYDDTSEGKKVCT 233 (320)
Q Consensus 165 ~~gsf~~A~~~Ak~~~-K~LLV~l~~~~~f----~c~~lnRdv------w~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~ 233 (320)
...+..+|++.-.+.+ ..+.| . +...+ .-..+-+-+ +.+..|.+++..+++....+..-.+..++..
T Consensus 28 ~~~~~~~a~~~~~~~~~~~~~V-~-~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~ 105 (157)
T 4fry_A 28 KNDFVYDAIKLMAEKGIGALLV-V-DGDDIAGIVTERDYARKVVLQERSSKATRVEEIMTAKVRYVEPSQSTDECMALMT 105 (157)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEE-E-SSSSEEEEEEHHHHHHHSGGGTCCSSSCBHHHHSBSSCCCBCTTSBHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHcCCCEEEE-e-eCCEEEEEEEHHHHHHHHHhccCCccccCHHHHcCCCCcEECCCCcHHHHHHHHH
Confidence 3568999988876544 55555 3 33222 122222211 3467789998887766655555566666666
Q ss_pred HcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHH
Q 020843 234 YYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPF 273 (320)
Q Consensus 234 ~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~f 273 (320)
.+ .+.++.|+| .|+ +.|.++..+++..+..-
T Consensus 106 ~~---~~~~lpVvd--~g~----~~Giit~~dil~~l~~~ 136 (157)
T 4fry_A 106 EH---RMRHLPVLD--GGK----LIGLISIGDLVKSVIAD 136 (157)
T ss_dssp HH---TCSEEEEEE--TTE----EEEEEEHHHHHHHHHTT
T ss_pred Hc---CCCEEEEEE--CCE----EEEEEEHHHHHHHHHHH
Confidence 66 466788888 364 44667788888877543
No 393
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=31.11 E-value=57 Score=24.52 Aligned_cols=95 Identities=11% Similarity=0.100 Sum_probs=56.8
Q ss_pred cccHHHHHHHHHhcC-CeEEEEEeCCCC----cchhhhh-----hcc-CCCHHHHHHHhcceEEEEeecCChHHHHHHHH
Q 020843 166 NGSFEKAKDAASVQD-KWLLVNLQSTKE----FSSHMLN-----RDT-WANEAVSQTISTNFIFWQVYDDTSEGKKVCTY 234 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~-K~LLV~l~~~~~----f~c~~ln-----Rdv-w~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~ 234 (320)
..+..+|++.-.+.+ .++.| +-.... ..-..+- +.. +.+..|.+++..+++....+..-.+..++...
T Consensus 24 ~~~~~~a~~~~~~~~~~~~~V-vd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~ 102 (133)
T 1y5h_A 24 HETLTAAAQYMREHDIGALPI-CGDDDRLHGMLTDRDIVIKGLAAGLDPNTATAGELARDSIYYVDANASIQEMLNVMEE 102 (133)
T ss_dssp TSBHHHHHHHHHHHTCSEEEE-ECGGGBEEEEEEHHHHHHTTGGGTCCTTTSBHHHHHTTCCCCEETTCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCCeEEE-ECCCCeEEEEEeHHHHHHHHHhcCCCccccCHHHHhcCCCEEECCCCCHHHHHHHHHH
Confidence 458899988776544 34433 212211 1122222 111 24567999998888777766665677676666
Q ss_pred cCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHH
Q 020843 235 YKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDL 270 (320)
Q Consensus 235 Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L 270 (320)
+ .+.++.|+|. |+ +.|.++..+++..+
T Consensus 103 ~---~~~~l~Vvd~--g~----~~Giit~~dil~~l 129 (133)
T 1y5h_A 103 H---QVRRVPVISE--HR----LVGIVTEADIARHL 129 (133)
T ss_dssp H---TCSEEEEEET--TE----EEEEEEHHHHHHTC
T ss_pred c---CCCEEEEEEC--CE----EEEEEEHHHHHHHH
Confidence 6 5677888884 63 45666777776544
No 394
>2hc5_A ORF 99, hypothetical protein YVYC; NESG, GFT-PSI, protein structure initiative, northeast structural genomics consortium, alpha-beta, FLAG; NMR {Bacillus subtilis} SCOP: d.352.1.1
Probab=30.86 E-value=58 Score=25.81 Aligned_cols=31 Identities=19% Similarity=0.243 Sum_probs=23.2
Q ss_pred CCcEEEEEecCCCceEEEEecCCChHHHHHHHHHH
Q 020843 239 SIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPF 273 (320)
Q Consensus 239 ~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~f 273 (320)
.-..|-|+|..||+.|.++ +|+++|+.+...
T Consensus 67 ~~~vVkVvD~~TgEVIRqI----PpEe~L~l~~~l 97 (117)
T 2hc5_A 67 NEYYVKVIEDSTNEVIREI----PPKRWLDFYAAM 97 (117)
T ss_dssp TEEEEEEEETTTTEEEEEE----CHHHHHHHHHHH
T ss_pred CcEEEEEEECCCCcEEEeC----ChHHHHHHHHHH
Confidence 3578899999999999885 577777644433
No 395
>1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1
Probab=30.06 E-value=25 Score=28.58 Aligned_cols=75 Identities=7% Similarity=-0.057 Sum_probs=45.5
Q ss_pred HHHHHHhcceEEEEeecC---ChHHHHHHHHcCCCCCcEEEEEecCC---Cce-EEE------EecCCChHHHHHHHHHH
Q 020843 207 AVSQTISTNFIFWQVYDD---TSEGKKVCTYYKLDSIPVVLVVDPIT---GQK-MRS------WCGMVQPESLLEDLVPF 273 (320)
Q Consensus 207 ~V~~~l~~nFV~~q~d~~---s~eg~~~~~~Y~v~~~P~i~Iidp~t---G~~-v~~------~~G~~~~~~fl~~L~~f 273 (320)
.|.+-|+..=|-..+|.. ..-|+++-. .....+|+++||-.+. |.. |.. -.|.++.++|+..|..-
T Consensus 26 ~V~~~L~~~GiRvevD~~r~~e~Lg~kIR~-a~~~kvPy~lVVG~kE~e~~sVsVR~r~~~~~e~~~m~lde~i~~l~~~ 104 (130)
T 1v95_A 26 SVGRKVRDLGMVVDLIFLNTEVSLSQALED-VSRGGSPFAIVITQQHQIHRSCTVNIMFGTPQEHRNMPQADAMVLVARN 104 (130)
T ss_dssp HHHHHHHTTTCCEEEEECTTSSCHHHHHHH-HHHHTCSEEEEECHHHHHHTEEEEEECSSSCCEEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEecCCCCCcHHHHHHH-HHHcCCCEEEEEechHHhcCeeEEEecCCCCCccCccCHHHHHHHHHHH
Confidence 445555554455555553 344655543 3346899999998741 211 221 12458899999999888
Q ss_pred HhcCCCccc
Q 020843 274 MDGGPREQH 282 (320)
Q Consensus 274 ld~~~~d~~ 282 (320)
+..|.-++.
T Consensus 105 ~~~~~~~~~ 113 (130)
T 1v95_A 105 YERYKNECR 113 (130)
T ss_dssp HHHHHHHHH
T ss_pred HHHHhhhhh
Confidence 877765543
No 396
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=29.47 E-value=99 Score=25.77 Aligned_cols=50 Identities=18% Similarity=0.152 Sum_probs=33.1
Q ss_pred cCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHH
Q 020843 202 TWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLV 271 (320)
Q Consensus 202 vw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~ 271 (320)
.+.++.+++.|+. ..+.+..+++.++|+++| +|+ .+.|....+.|.+.|.
T Consensus 149 ~~~s~~~~~~v~~-------------~~~~a~~~Gv~GvPtfvv----~g~---~~~G~~~~~~l~~~l~ 198 (202)
T 3fz5_A 149 GIADPALKETVRK-------------IGEDAVARGIFGSPFFLV----DDE---PFWGWDRMEMMAEWIR 198 (202)
T ss_dssp HTTCHHHHHHHHH-------------HHHHHHHTTCCSSSEEEE----TTE---EEESGGGHHHHHHHHH
T ss_pred HhcCHHHHHHHHH-------------HHHHHHHCCCCcCCEEEE----CCE---EEecCCCHHHHHHHHh
Confidence 4556677766663 234455689999999987 464 4678777666665553
No 397
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=28.65 E-value=43 Score=28.91 Aligned_cols=99 Identities=11% Similarity=0.122 Sum_probs=67.3
Q ss_pred ccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEE
Q 020843 167 GSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVV 246 (320)
Q Consensus 167 gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Ii 246 (320)
+.+++..+..++.+|.++|+ .+ +...+=.++.-.+||.+.+=.-.+=-+....-+.++..++.+.|.+++|
T Consensus 41 ~~l~~~v~~lk~~~K~v~Vh-~D--------li~Gls~d~~ai~fL~~~~~pdGIIsTk~~~i~~Ak~~gL~tIqR~Fli 111 (192)
T 3kts_A 41 AQLKALVKYAQAGGKKVLLH-AD--------LVNGLKNDDYAIDFLCTEICPDGIISTRGNAIMKAKQHKMLAIQRLFMI 111 (192)
T ss_dssp TTHHHHHHHHHHTTCEEEEE-GG--------GEETCCCSHHHHHHHHHTTCCSEEEESCHHHHHHHHHTTCEEEEEEECC
T ss_pred HHHHHHHHHHHHcCCeEEEe-cC--------chhccCCcHHHHHHHHhCCCCCEEEeCcHHHHHHHHHCCCeEEEEEEEE
Confidence 58999999999999988873 21 2233336788889998643222232345677888999999999999999
Q ss_pred ecCC---Cc---------eEEEEecCCChHHHHHHHHHHHhc
Q 020843 247 DPIT---GQ---------KMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 247 dp~t---G~---------~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
|... +. .+...+|.+ | .+++.+.+.++.
T Consensus 112 DS~al~~~~~~i~~~~PD~iEiLPGi~-p-~iI~~i~~~~~~ 151 (192)
T 3kts_A 112 DSSAYNKGVALIQKVQPDCIELLPGII-P-EQVQKMTQKLHI 151 (192)
T ss_dssp SHHHHHHHHHHHHHHCCSEEEEECTTC-H-HHHHHHHHHHCC
T ss_pred EcchHHHHHHHHhhcCCCEEEECCchh-H-HHHHHHHHhcCC
Confidence 9531 11 133456744 5 588888877643
No 398
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=28.57 E-value=47 Score=27.75 Aligned_cols=44 Identities=9% Similarity=-0.037 Sum_probs=31.2
Q ss_pred CeEEEEEeCCCCcchhhhhhccCCCHHHHHHHh--cceEEEEeecC
Q 020843 181 KWLLVNLQSTKEFSSHMLNRDTWANEAVSQTIS--TNFIFWQVYDD 224 (320)
Q Consensus 181 K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~--~nFV~~q~d~~ 224 (320)
|..+|.|.+-+|+.|..|...+=.-+.+++.+. -.|++..+...
T Consensus 22 ~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~~v~~~~~~~~~~ 67 (191)
T 3l9s_A 22 EPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEGTKMTKYHVEFL 67 (191)
T ss_dssp SSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTTCCEEEEECSSS
T ss_pred CCeEEEEECCCChhHHHhChhccchHHHHHhCCCCcEEEEEecccc
Confidence 778999999999999999865311245555443 36777777764
No 399
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=28.53 E-value=76 Score=24.55 Aligned_cols=106 Identities=12% Similarity=0.087 Sum_probs=59.5
Q ss_pred hhhhcCC--Cccccc-cccHHHHHHHHHhcCCeEEEEEeCCCCcc----hhhhhhc-----cCCCHHHHHHHhcceEEEE
Q 020843 153 LASLYRP--PFHLMF-NGSFEKAKDAASVQDKWLLVNLQSTKEFS----SHMLNRD-----TWANEAVSQTISTNFIFWQ 220 (320)
Q Consensus 153 l~~lf~P--pf~~~~-~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~----c~~lnRd-----vw~n~~V~~~l~~nFV~~q 220 (320)
..++-.| ++..+. ..+..+|++.-.+.+-..++.+.....+- -..+-+- -|.+..|.+++..+++...
T Consensus 30 v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~~~v~ 109 (149)
T 3k2v_A 30 VNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDTGVDMRDASIADVMTRGGIRIR 109 (149)
T ss_dssp GGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCSSSCCTTCBHHHHSEESCCEEC
T ss_pred HHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhcCCCcccCcHHHHcCCCCeEEC
Confidence 3455455 444443 56899999887765533333333332221 1111111 1356678888888876665
Q ss_pred eecCChHHHHHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHH
Q 020843 221 VYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLL 267 (320)
Q Consensus 221 ~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl 267 (320)
.+..-.+..++...+ .+.++.|+|. | ++.|.++..+++
T Consensus 110 ~~~~l~~a~~~m~~~---~~~~lpVvd~--~----~~~Giit~~dil 147 (149)
T 3k2v_A 110 PGTLAVDALNLMQSR---HITCVLVADG--D----HLLGVVHMHDLL 147 (149)
T ss_dssp TTCBHHHHHHHHHHH---TCSEEEEEET--T----EEEEEEEHHHHT
T ss_pred CCCCHHHHHHHHHHc---CCCEEEEecC--C----EEEEEEEHHHhh
Confidence 555556666666666 5678888984 4 234555555543
No 400
>2j9u_A VPS28, vacuolar protein sorting-associated protein 28; zinc-finger, metal-binding, protein transport; 2.00A {Saccharomyces cerevisiae} SCOP: a.24.28.1 PDB: 2j9v_A 2g3k_A
Probab=28.39 E-value=27 Score=26.91 Aligned_cols=24 Identities=25% Similarity=0.358 Sum_probs=21.0
Q ss_pred cCCCHHHHHHHHHHcCCCHHHHHHHHhc
Q 020843 22 VGQTAETAVQFLQATSWKLDEAIQLFYV 49 (320)
Q Consensus 22 t~~~~~~A~~~Le~~~wdLe~Av~~ff~ 49 (320)
-.-++++|+|+| +|||.|-+.|+.
T Consensus 70 deL~e~q~Rqll----fDle~aY~~F~~ 93 (96)
T 2j9u_A 70 DTLTETQIRELL----FDLELAYKSFYA 93 (96)
T ss_dssp CBCCHHHHHHHH----HHHHHHHHHHHH
T ss_pred ccCCHHHHHHHH----HHHHHHHHHHHH
Confidence 456799999999 789999999985
No 401
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=28.01 E-value=67 Score=25.63 Aligned_cols=64 Identities=8% Similarity=0.127 Sum_probs=42.4
Q ss_pred CCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHhc
Q 020843 204 ANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 204 ~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld~ 276 (320)
.+..|.+++..+++.+..+..=.+..++.... .++++.|++ .|+ +.|.++..+++..+.+....
T Consensus 106 ~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~---~~~~l~Vvd--~g~----~vGiit~~dll~~l~~~~~~ 169 (185)
T 2j9l_A 106 PTLKLRNILDLSPFTVTDLTPMEIVVDIFRKL---GLRQCLVTH--NGR----LLGIITKKDVLKHIAQMANQ 169 (185)
T ss_dssp CCEECGGGEESSCCEEETTSBHHHHHHHHHHH---TCSEEEEEE--TTE----EEEEEEHHHHHHHHHHHCC-
T ss_pred cCccHHHhhCcCCeEeCCCCCHHHHHHHHHhC---CCcEEEEEE--CCE----EEEEEEHHHHHHHHHHhhcc
Confidence 44556777766776666555556666666555 567888888 464 45767888888888765543
No 402
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=28.00 E-value=84 Score=24.18 Aligned_cols=98 Identities=16% Similarity=0.186 Sum_probs=56.4
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCC-CCcchhhhhhccCC------CHHHHHHHhcceEEEEeecCChHHHHHHHHcCCC
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQST-KEFSSHMLNRDTWA------NEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLD 238 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~-~~f~c~~lnRdvw~------n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~ 238 (320)
..+..+|++.-.+.+.--+..+... ..+---.-.+|+.. +..|.+++ .+.++...+..-.+..++...+
T Consensus 41 ~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~--- 116 (148)
T 3lv9_A 41 SDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINENKIELEEIL-RDIIYISENLTIDKALERIRKE--- 116 (148)
T ss_dssp TCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHHSCCCGGGTC-BCCEEEETTSBHHHHHHHHHHH---
T ss_pred CCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcCCCccHHHhc-CCCeEECCCCCHHHHHHHHHhc---
Confidence 4588999988777553333323322 22211111111111 34566666 5676666655556666666666
Q ss_pred CCcEEEEEecCCCceEEEEecCCChHHHHHHHHH
Q 020843 239 SIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVP 272 (320)
Q Consensus 239 ~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~ 272 (320)
.++++.|+|. .|+. .|.++..++++.|..
T Consensus 117 ~~~~l~Vvd~-~g~~----~Giit~~dil~~l~~ 145 (148)
T 3lv9_A 117 KLQLAIVVDE-YGGT----SGVVTIEDILEEIVG 145 (148)
T ss_dssp TCSEEEEECT-TSSE----EEEEEHHHHHHHHHH
T ss_pred CCeEEEEEeC-CCCE----EEEEEHHHHHHHHhC
Confidence 5688888985 4654 466778888887753
No 403
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=27.33 E-value=46 Score=28.63 Aligned_cols=72 Identities=8% Similarity=-0.034 Sum_probs=53.0
Q ss_pred ccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEE
Q 020843 167 GSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVV 246 (320)
Q Consensus 167 gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Ii 246 (320)
+..++..+..|+.+|.++|++=. +.-| =.++.-.+|| +.+=...+=-+...+-+.++++++.+.|.+++|
T Consensus 43 ~~L~~iv~~ik~~gK~vivh~Dl-----I~GL----s~d~~ai~fL-~~~~pdGIIsTk~~~i~~Akk~GL~tIqR~Fli 112 (188)
T 1vkf_A 43 LNLKFHLKILKDRGKTVFVDMDF-----VNGL----GEGEEAILFV-KKAGADGIITIKPKNYVVAKKNGIPAVLRFFAL 112 (188)
T ss_dssp TTHHHHHHHHHHTTCEEEEEGGG-----EETC----CSSHHHHHHH-HHHTCSEEEESCHHHHHHHHHTTCCEEEEEECC
T ss_pred HHHHHHHHHHHHCCCeEEEecCc-----cccc----CCCHHHHHHH-HhcCCCEEEcCcHHHHHHHHHcCCEEeeEEEEE
Confidence 45899999999999999887532 2233 2577888888 433233333455778899999999999999999
Q ss_pred ec
Q 020843 247 DP 248 (320)
Q Consensus 247 dp 248 (320)
|.
T Consensus 113 Ds 114 (188)
T 1vkf_A 113 DS 114 (188)
T ss_dssp SH
T ss_pred Ee
Confidence 95
No 404
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=25.95 E-value=2.9e+02 Score=23.08 Aligned_cols=94 Identities=11% Similarity=0.071 Sum_probs=50.3
Q ss_pred CccccccccHHHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCC
Q 020843 160 PFHLMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDS 239 (320)
Q Consensus 160 pf~~~~~gsf~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~ 239 (320)
|..+ .+-+++-+. .+.++.++|-+..++|- .+... | ..+.+.+ .++.|.... ...++..|++..
T Consensus 11 ~~~l---~s~~~~~~~-l~~~~v~vVgff~~~~~---~~~~~-f--~~~A~~l-~~~~F~~t~-----~~~v~~~~~v~~ 74 (227)
T 4f9z_D 11 PTWL---TDVPAAMEF-IAATEVAVIGFFQDLEI---PAVPI-L--HSMVQKF-PGVSFGIST-----DSEVLTHYNITG 74 (227)
T ss_dssp CEEC---CSHHHHHHH-HHTSSEEEEEECSCSCS---THHHH-H--HHHTTTC-TTSEEEEEC-----CHHHHHHTTCCS
T ss_pred Ceee---CCHHHHHHH-HhcCCeEEEEEecCCCc---hhHHH-H--HHHHHhC-CCceEEEEC-----CHHHHHHcCCCC
Confidence 4455 444444433 34577777777776532 22110 0 2333334 256666532 245778899987
Q ss_pred CcEEEEEecCCCceEEEEec----CCChHHHHHHHH
Q 020843 240 IPVVLVVDPITGQKMRSWCG----MVQPESLLEDLV 271 (320)
Q Consensus 240 ~P~i~Iidp~tG~~v~~~~G----~~~~~~fl~~L~ 271 (320)
|+|.+.-+. .+.-....| ..+.+.+.+-+.
T Consensus 75 -p~i~lfk~~-~~~~~~~~~~~~g~~~~~~l~~fi~ 108 (227)
T 4f9z_D 75 -NTICLFRLV-DNEQLNLEDEDIESIDATKLSRFIE 108 (227)
T ss_dssp -SEEEEEETT-TTEEEEECHHHHHTCCHHHHHHHHH
T ss_pred -CeEEEEEec-CcccccccccccCCCCHHHHHHHHH
Confidence 999988863 223334453 566665444333
No 405
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=25.62 E-value=2.3e+02 Score=21.72 Aligned_cols=101 Identities=8% Similarity=0.100 Sum_probs=57.9
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeC--CCCcc----hhhhhhcc---------CCCHHHHHHHhcc------eEEEEeecC
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQS--TKEFS----SHMLNRDT---------WANEAVSQTISTN------FIFWQVYDD 224 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~--~~~f~----c~~lnRdv---------w~n~~V~~~l~~n------FV~~q~d~~ 224 (320)
..+..+|++.-.+.+-..+..+-+ ...+- -..+-+-+ .....|.+++..+ ++.+..+..
T Consensus 29 ~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~ 108 (164)
T 2pfi_A 29 DTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAPGHQQCLQDILARGCPTEPVTLTLFSETT 108 (164)
T ss_dssp TCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-------CCCCBHHHHHHTTCCCBCCCCCEETTCB
T ss_pred CCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccCCcccchhhhhhcccccccCCceEECCCCc
Confidence 558999998877665444443432 22211 11111111 1224577888765 444444444
Q ss_pred ChHHHHHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHHHh
Q 020843 225 TSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPFMD 275 (320)
Q Consensus 225 s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~fld 275 (320)
=.+..++...+ .+.++.|+| .|+ +.|.++..+++..+.+.+.
T Consensus 109 l~~~~~~m~~~---~~~~lpVvd--~g~----l~Giit~~dil~~~~~~~~ 150 (164)
T 2pfi_A 109 LHQAQNLFKLL---NLQSLFVTS--RGR----AVGCVSWVEMKKAISNLTN 150 (164)
T ss_dssp HHHHHHHHHHT---TCSEEEEEE--TTE----EEEEEEHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHh---CCCEEEEEE--CCE----EEEEEEHHHHHHHHHhhhC
Confidence 35555555554 577888999 364 4577788899988877653
No 406
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=25.50 E-value=1.5e+02 Score=22.16 Aligned_cols=98 Identities=9% Similarity=0.002 Sum_probs=52.5
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCCCCc----chhhhhhc------cCCCHHHHHHHhc------ceEEEEeecCChHHH
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQSTKEF----SSHMLNRD------TWANEAVSQTIST------NFIFWQVYDDTSEGK 229 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~~~f----~c~~lnRd------vw~n~~V~~~l~~------nFV~~q~d~~s~eg~ 229 (320)
..+..+|++.-.+.+.-.+..+-....+ .-..+-+- -+.+..|.+++.. .++....+..=.+..
T Consensus 27 ~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~ 106 (144)
T 2nyc_A 27 TTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIYNDLSLSVGEALMRRSDDFEGVYTCTKNDKLSTIM 106 (144)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHTC----CCSBHHHHHHHCC------CEECTTSBHHHHH
T ss_pred CCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhcccccccCCccHHHHHhcCccccCCCeEECCCCcHHHHH
Confidence 4588888887766543222222222221 11111111 1235578888765 455554444445566
Q ss_pred HHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHH
Q 020843 230 KVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLV 271 (320)
Q Consensus 230 ~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~ 271 (320)
++.... .+.++.|+|. .|+. .|.++..+++..|.
T Consensus 107 ~~m~~~---~~~~l~Vvd~-~g~~----~Giit~~dil~~l~ 140 (144)
T 2nyc_A 107 DNIRKA---RVHRFFVVDD-VGRL----VGVLTLSDILKYIL 140 (144)
T ss_dssp HHHHHH---TCSEEEEECT-TSBE----EEEEEHHHHHHHHH
T ss_pred HHHHHC---CCCEEEEECC-CCCE----EEEEEHHHHHHHHH
Confidence 665555 5677888885 4654 46677888887764
No 407
>3ihp_A Ubiquitin carboxyl-terminal hydrolase 5; hydrolase, protease, thiol protease, UBL conjugation pathway, metal-binding, zinc-finger,structural genomics; 2.80A {Homo sapiens}
Probab=25.20 E-value=68 Score=33.75 Aligned_cols=40 Identities=20% Similarity=0.377 Sum_probs=35.8
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCC
Q 020843 10 KQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGN 51 (320)
Q Consensus 10 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~ 51 (320)
..+.|.+..++ |-+.++|+.-|..+++|++.|++-.|+..
T Consensus 720 ~~e~i~~l~~m--Gf~~~~a~~aL~~t~~~~eraidwlfs~~ 759 (854)
T 3ihp_A 720 PEDCVTTIVSM--GFSRDQALKALRATNNSLERAVDWIFSHI 759 (854)
T ss_dssp CHHHHHHHHTT--TCCHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHc--CCCHHHHHHHHHhhcCcHHHHHHhhhcCc
Confidence 56788888877 89999999999999999999999999853
No 408
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=24.89 E-value=38 Score=25.70 Aligned_cols=96 Identities=13% Similarity=0.239 Sum_probs=54.2
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCCCCc----chhhhhhc------cCCCHHHHHHHhcceEEEEeecCChHHHHHHHHc
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQSTKEF----SSHMLNRD------TWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYY 235 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~~~f----~c~~lnRd------vw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y 235 (320)
..+..+|++.-.+.+...++.+- ...+ .-..+-+. .+.+..|.+++..+++.+..+..=.+..++...+
T Consensus 25 ~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~ 103 (135)
T 2rc3_A 25 DDSVFNAMQKMAADNIGALLVMK-DEKLVGILTERDFSRKSYLLDKPVKDTQVKEIMTRQVAYVDLNNTNEDCMALITEM 103 (135)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHGGGSSSCGGGSBGGGTSBCSCCCBCTTCBHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEehHHHHHHHHHcCCCcccCCHHHhccCCCeEECCCCcHHHHHHHHHHh
Confidence 45899999887765543333332 2221 11112111 1234456677766665555444445566665555
Q ss_pred CCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHH
Q 020843 236 KLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLV 271 (320)
Q Consensus 236 ~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~ 271 (320)
.+.++.|+| .|+ +.|.++..+++..+.
T Consensus 104 ---~~~~lpVvd--~g~----~~Giit~~dll~~~~ 130 (135)
T 2rc3_A 104 ---RVRHLPVLD--DGK----VIGLLSIGDLVKDAI 130 (135)
T ss_dssp ---TCSEEEEEE--TTE----EEEEEEHHHHHHHHH
T ss_pred ---CCCEEEEEe--CCE----EEEEEEHHHHHHHHH
Confidence 567888898 364 456677788777654
No 409
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=24.77 E-value=53 Score=25.13 Aligned_cols=108 Identities=9% Similarity=0.047 Sum_probs=60.8
Q ss_pred hhcCCCcccc-ccccHHHHHHHHHhcCC-eEEEEEeCCC--Cc----chhhhh----hccCCCHHHHHHHhcceEEEEee
Q 020843 155 SLYRPPFHLM-FNGSFEKAKDAASVQDK-WLLVNLQSTK--EF----SSHMLN----RDTWANEAVSQTISTNFIFWQVY 222 (320)
Q Consensus 155 ~lf~Ppf~~~-~~gsf~~A~~~Ak~~~K-~LLV~l~~~~--~f----~c~~ln----Rdvw~n~~V~~~l~~nFV~~q~d 222 (320)
++..+++..+ ...+..+|++.-.+.+. .+.| +-+.. .+ .-..+- +..+.+..|.+++..+++.+..+
T Consensus 9 ~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V-vd~~~~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~~~~v~~~ 87 (141)
T 2rih_A 9 ELLKRPPVSLPETATIREVATELAKNRVGLAVL-TARDNPKRPVAVVSERDILRAVAQRLDLDGPAMPIANSPITVLDTD 87 (141)
T ss_dssp GGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEE-EETTEEEEEEEEEEHHHHHHHHHTTCCTTSBSGGGCBCCCEEETTS
T ss_pred HHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEE-EcCCCcceeEEEEEHHHHHHHHhcCCCCCCCHHHHcCCCCeEEcCC
Confidence 3333443333 34589999988776543 3333 22221 11 111111 11233556777777778777777
Q ss_pred cCChHHHHHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHH
Q 020843 223 DDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVP 272 (320)
Q Consensus 223 ~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~ 272 (320)
.-.+..++...+ .+.++.|+|. .|+. .|.++..+++..+..
T Consensus 88 -~l~~a~~~m~~~---~~~~l~Vvd~-~g~~----~Giit~~dll~~~~~ 128 (141)
T 2rih_A 88 -PVHVAAEKMRRH---NIRHVVVVNK-NGEL----VGVLSIRDLCFERAI 128 (141)
T ss_dssp -BHHHHHHHHHHH---TCSEEEEECT-TSCE----EEEEEHHHHHSCHHH
T ss_pred -CHHHHHHHHHHc---CCeEEEEEcC-CCcE----EEEEEHHHHHHHHHH
Confidence 556676666666 5677888984 4654 466677777665544
No 410
>2j9w_A VPS28, VPS28-PROV protein; NZF finger, HIV budding, protein transport; 1.30A {Xenopus laevis}
Probab=24.73 E-value=39 Score=26.28 Aligned_cols=24 Identities=21% Similarity=0.235 Sum_probs=21.1
Q ss_pred cCCCHHHHHHHHHHcCCCHHHHHHHHhc
Q 020843 22 VGQTAETAVQFLQATSWKLDEAIQLFYV 49 (320)
Q Consensus 22 t~~~~~~A~~~Le~~~wdLe~Av~~ff~ 49 (320)
---++++|+|+| +|||.|-+.|+.
T Consensus 75 deL~e~q~Rqll----fDle~aY~~F~~ 98 (102)
T 2j9w_A 75 DELDDSQVRQML----FDLESAYNAFNR 98 (102)
T ss_dssp CBCCHHHHHHHH----HHHHHHHHHHHH
T ss_pred ccCCHHHHHHHH----HHHHHHHHHHHH
Confidence 456799999999 789999999985
No 411
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E*
Probab=24.55 E-value=76 Score=29.69 Aligned_cols=42 Identities=14% Similarity=0.228 Sum_probs=32.0
Q ss_pred cchHHHHHhhhccc-------cCCCHHHHHHHHHHcCCCHHHHHHHHhc
Q 020843 8 NDKQSMVSSFLEIA-------VGQTAETAVQFLQATSWKLDEAIQLFYV 49 (320)
Q Consensus 8 ~~~~~~i~~F~~iT-------t~~~~~~A~~~Le~~~wdLe~Av~~ff~ 49 (320)
..+++.|.+|.+.- -..|...-.+||.+++||++.|...+-.
T Consensus 10 ~~q~~~l~~lr~~l~~~~~~l~~~dD~~LlRFLrarkfdv~~A~~~l~~ 58 (403)
T 1olm_A 10 PRQKEALAKFRENVQDVLPALPNPDDYFLLRWLRARSFDLQKSEAMLRK 58 (403)
T ss_dssp HHHHHHHHHHHHHHGGGGGGSSCCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhccCCCCCChhHHHHHHHhcCCCHHHHHHHHHH
Confidence 34667777775421 2468899999999999999999998743
No 412
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=24.25 E-value=77 Score=25.42 Aligned_cols=98 Identities=12% Similarity=0.088 Sum_probs=57.9
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCC-CCcchhhhhhccCC------CHHHHHHHhcceEEEEeecCChHHHHHHHHcCCC
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQST-KEFSSHMLNRDTWA------NEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLD 238 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~-~~f~c~~lnRdvw~------n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~ 238 (320)
..+..+|++.-.+.+---+..+... ..+---.-.+|++. +..|.+++ .+.+....+..-.+..++...+
T Consensus 60 ~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~--- 135 (172)
T 3lhh_A 60 NLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIAGERLELVDLV-KNCNFVPNSLSGMELLEHFRTT--- 135 (172)
T ss_dssp TSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHTTCCCCGGGGC-BCCEEEETTCCHHHHHHHHHHH---
T ss_pred CCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhhcCcccHHHHh-cCCeEeCCCCCHHHHHHHHHHc---
Confidence 4588899888776543333223322 22211111122211 34577777 6777776666556777777666
Q ss_pred CCcEEEEEecCCCceEEEEecCCChHHHHHHHHH
Q 020843 239 SIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVP 272 (320)
Q Consensus 239 ~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~ 272 (320)
.++++.|+|. .|+. .|.++..++++.|..
T Consensus 136 ~~~~~pVvd~-~g~l----vGiit~~Dil~~l~~ 164 (172)
T 3lhh_A 136 GSQMVFVVDE-YGDL----KGLVTLQDMMDALTG 164 (172)
T ss_dssp TCSEEEEECT-TSCE----EEEEEHHHHHHHHHT
T ss_pred CCeEEEEEeC-CCCE----EEEeeHHHHHHHHhC
Confidence 4688889985 4654 466778888887754
No 413
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=24.24 E-value=1.4e+02 Score=29.26 Aligned_cols=63 Identities=10% Similarity=0.132 Sum_probs=35.7
Q ss_pred HHHHHHHHhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcc---eEEEEeecCC--hHH-HHHHHHcCCCCCcEE
Q 020843 170 EKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTN---FIFWQVYDDT--SEG-KKVCTYYKLDSIPVV 243 (320)
Q Consensus 170 ~~A~~~Ak~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~n---FV~~q~d~~s--~eg-~~~~~~Y~v~~~P~i 243 (320)
.+.++...+.+| |.| +..+||+.|+ .++++|+++ |-.+.++.+. ++- ..+.+.++..++|.|
T Consensus 8 ~~~v~~~i~~~~-v~v-y~~~~Cp~C~----------~~k~~L~~~~i~~~~~dv~~~~~~~~~~~~l~~~~g~~tvP~v 75 (598)
T 2x8g_A 8 SQWLRKTVDSAA-VIL-FSKTTCPYCK----------KVKDVLAEAKIKHATIELDQLSNGSAIQKCLASFSKIETVPQM 75 (598)
T ss_dssp HHHHHHHHHHCS-EEE-EECTTCHHHH----------HHHHHHHHTTCCCEEEEGGGSTTHHHHHHHTHHHHSCCCSCEE
T ss_pred HHHHHHHhccCC-EEE-EECCCChhHH----------HHHHHHHHCCCCcEEEEcccCcchHHHHHHHHHHhCCceeCEE
Confidence 345555555565 333 5567999996 456677654 4443333322 222 334445677899998
Q ss_pred E
Q 020843 244 L 244 (320)
Q Consensus 244 ~ 244 (320)
.
T Consensus 76 ~ 76 (598)
T 2x8g_A 76 F 76 (598)
T ss_dssp E
T ss_pred E
Confidence 4
No 414
>1wj6_A KIAA0049 protein, RSGI RUH-024; PB1 domain, protein binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: d.15.2.2
Probab=24.15 E-value=49 Score=25.71 Aligned_cols=29 Identities=21% Similarity=0.260 Sum_probs=24.7
Q ss_pred cccccccHHHHHHHHHhcCCeEEEEEeCC
Q 020843 162 HLMFNGSFEKAKDAASVQDKWLLVNLQST 190 (320)
Q Consensus 162 ~~~~~gsf~~A~~~Ak~~~K~LLV~l~~~ 190 (320)
-+..+..|+||++.|.+++.-|-++++..
T Consensus 67 ~i~Sq~E~eEAlkva~k~~n~L~m~V~~~ 95 (101)
T 1wj6_A 67 SINSQGEYEEALKMAVKQGNQLQMQVHEG 95 (101)
T ss_dssp CCCSHHHHHHHHHHHHHHTSEEEEECCBC
T ss_pred EEecHHHHHHHHHHhccCCCEEEEEEeec
Confidence 34557899999999999999999999864
No 415
>2bkf_A Zinc-finger protein NBR1 (NEXT to breast cancer 1; PB1 domain, interaction domain, Z finger; 1.56A {Homo sapiens} SCOP: d.15.2.2 PDB: 2g4s_A
Probab=24.05 E-value=54 Score=24.78 Aligned_cols=28 Identities=21% Similarity=0.283 Sum_probs=23.8
Q ss_pred cccccccHHHHHHHHHhcCCeEEEEEeC
Q 020843 162 HLMFNGSFEKAKDAASVQDKWLLVNLQS 189 (320)
Q Consensus 162 ~~~~~gsf~~A~~~Ak~~~K~LLV~l~~ 189 (320)
-+..++.|+||++.|.+++.-|-++++.
T Consensus 59 ~i~Sq~E~eEAlkva~k~~n~L~m~v~~ 86 (87)
T 2bkf_A 59 SINSQGEYEEALKMAVKQGNQLQMQVHE 86 (87)
T ss_dssp EECSHHHHHHHHHHHHHTTTEEEEEEEE
T ss_pred EEecHHHHHHHHHHhccCCCEEEEEEec
Confidence 3456789999999999999999988864
No 416
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=22.33 E-value=2e+02 Score=23.99 Aligned_cols=35 Identities=20% Similarity=0.450 Sum_probs=23.1
Q ss_pred CCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCCceE
Q 020843 203 WANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKM 254 (320)
Q Consensus 203 w~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v 254 (320)
+.++.+.+.|+. ..+.++.+++.+.|+++| +|+.+
T Consensus 27 l~s~~~~~~v~~-------------~~~~a~~~gi~gvP~fvi----ngk~~ 61 (197)
T 1un2_A 27 WNSFVVKSLVAQ-------------QEKAAADVQLRGVPAMFV----NGKYQ 61 (197)
T ss_dssp HTSHHHHHHHHH-------------HHHHHHHTTCCSSSEEEE----TTTEE
T ss_pred HhCHHHHHHHHH-------------HHHHHHHcCCCcCCEEEE----cceEe
Confidence 455666666552 234677899999999965 45544
No 417
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=21.34 E-value=87 Score=26.46 Aligned_cols=66 Identities=15% Similarity=0.094 Sum_probs=39.1
Q ss_pred HhcCCeEEEEEeCCCCcchhhhhhccCCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCC---ce
Q 020843 177 SVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITG---QK 253 (320)
Q Consensus 177 k~~~K~LLV~l~~~~~f~c~~lnRdvw~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG---~~ 253 (320)
.+.+|+|+|- ..||+..|.|+...+-+.. +. .+++ .||.|..| +.
T Consensus 104 la~~~pvvla---------Pamn~~m~~~p~~~~Nl~~----------------L~-~~G~------~iv~p~~g~~f~l 151 (181)
T 1g63_A 104 LTGYQKLFIF---------PNMNIRMWGNPFLQKNIDL----------------LK-NNDV------KVYSPDMNKSFEI 151 (181)
T ss_dssp HHTGGGEEEE---------ECCCHHHHTCHHHHHHHHH----------------HH-TTTC------EECCCEECC----
T ss_pred HHcCCCEEEE---------eCCChhhcCCHHHHHHHHH----------------HH-HCCC------EEECCCCCccccc
Confidence 4467787774 5799999999988776652 22 2433 45555545 22
Q ss_pred EEEE-e--c-CCChHHHHHHHHHHH
Q 020843 254 MRSW-C--G-MVQPESLLEDLVPFM 274 (320)
Q Consensus 254 v~~~-~--G-~~~~~~fl~~L~~fl 274 (320)
-... . | ..+++++++.+...+
T Consensus 152 acg~~~g~g~~~~~~~iv~~v~~~l 176 (181)
T 1g63_A 152 SSGRYKNNITMPNIENVLNFVLNNE 176 (181)
T ss_dssp ------CCEECCCHHHHHHHHHC--
T ss_pred ccCCccCCcCCCCHHHHHHHHHHHh
Confidence 2111 2 2 358999999888777
No 418
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=21.32 E-value=3e+02 Score=22.97 Aligned_cols=40 Identities=18% Similarity=0.101 Sum_probs=25.6
Q ss_pred HHHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHH
Q 020843 229 KKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLV 271 (320)
Q Consensus 229 ~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~ 271 (320)
.+.++.+++.++|+++ |+. .|+ -..+.|....+.|.+.|.
T Consensus 172 ~~~a~~~gv~G~Ptfv-v~~-~g~-~~~~~G~~~~~~l~~~l~ 211 (226)
T 1r4w_A 172 TGAACKYGAFGLPTTV-AHV-DGK-TYMLFGSDRMELLAYLLG 211 (226)
T ss_dssp HHHHHHTTCCSSCEEE-EEE-TTE-EEEEESTTCHHHHHHHHT
T ss_pred HHHHHHCCCCCCCEEE-EeC-CCC-cCceeCCCcHHHHHHHhc
Confidence 3456678999999985 553 343 124678777666655554
No 419
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=20.76 E-value=3.5e+02 Score=22.99 Aligned_cols=115 Identities=16% Similarity=0.152 Sum_probs=59.4
Q ss_pred HHhhhhhcCCCccccccccHHHHHHHHHhcCCeEEEEEeCCC-Ccc-hhhhh--hccCCCHHHHHHHhcceEEEEeecCC
Q 020843 150 RDNLASLYRPPFHLMFNGSFEKAKDAASVQDKWLLVNLQSTK-EFS-SHMLN--RDTWANEAVSQTISTNFIFWQVYDDT 225 (320)
Q Consensus 150 ~~~l~~lf~Ppf~~~~~gsf~~A~~~Ak~~~K~LLV~l~~~~-~f~-c~~ln--Rdvw~n~~V~~~l~~nFV~~q~d~~s 225 (320)
.+.+..-..|-+..+...++.+ .. .++.+++-++... +.. +...+ ++.+. .|.+-.+ .+.|.-+|...
T Consensus 107 ~~fi~~~~~Plv~e~t~~n~~~---~~--~~~~l~~~~~~~d~~~~~~~~~~~~~~~~~--~vAk~~k-ki~F~~~d~~~ 178 (250)
T 3ec3_A 107 KDYVVKHALPLVGHRKTSNDAK---RY--SKRPLVVVYYSVDFSFDYRTATQFWRNKVL--EVAKDFP-EYTFAIADEED 178 (250)
T ss_dssp HHHHHHHSSCTEEEECTTTHHH---HS--CSSSEEEEEECCCCSTTTHHHHHHHHHHHH--HHHTTCT-TSEEEEEETTT
T ss_pred HHHHHHcCCCceeecCccchhh---hh--ccCccEEEEEecccccccchhHHHHHHHHH--HHHHhhc-ceeEEEEcHHH
Confidence 3444444456665544445433 22 3566666666432 211 11111 12221 2333233 45555566543
Q ss_pred hHHHHHHHHcCCC--CC-cEEEEEecCCCceEEEEe-cCCChHHHHHHHHHHHhc
Q 020843 226 SEGKKVCTYYKLD--SI-PVVLVVDPITGQKMRSWC-GMVQPESLLEDLVPFMDG 276 (320)
Q Consensus 226 ~eg~~~~~~Y~v~--~~-P~i~Iidp~tG~~v~~~~-G~~~~~~fl~~L~~fld~ 276 (320)
- .+.++.|++. .+ |.+++++. .+.+ .... +.++++.+.+-+..+++-
T Consensus 179 ~--~~~l~~fgl~~~~~~p~~~~~~~-~~~k-y~~~~~~~t~~~i~~Fv~~~~~G 229 (250)
T 3ec3_A 179 Y--ATEVKDLGLSESGGDVNAAILDE-SGKK-FAMEPEEFDSDALREFVMAFKKG 229 (250)
T ss_dssp T--HHHHHHTTCSSCSCSCEEEEECT-TSCE-EECCCCSCCHHHHHHHHHHHHTT
T ss_pred H--HHHHHHcCCCccCCCcEEEEEcC-CCce-ecCCcccCCHHHHHHHHHHHHCC
Confidence 2 2355678875 34 58888884 4443 2333 567888888888887765
No 420
>2l3n_A DNA-binding protein RAP1, telomere length regulat; TAZ1; NMR {Schizosaccharomyces pombe}
Probab=20.75 E-value=2.4e+02 Score=20.78 Aligned_cols=44 Identities=14% Similarity=0.207 Sum_probs=36.9
Q ss_pred chHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHhcCCCC
Q 020843 9 DKQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNES 53 (320)
Q Consensus 9 ~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~~ff~~~~~ 53 (320)
+-+++|...+-. |+.++.+-...+|..++.+-.||...+.....
T Consensus 13 evdeaidnilry-tnsteqqfleamestggrvriaiakllskqts 56 (104)
T 2l3n_A 13 EVDEAIDNILRY-TNSTEQQFLEAMESTGGRVRIAIAKLLSKQTS 56 (104)
T ss_dssp HHHHHHHHHHHH-HTCCHHHHHHHHHHHTTCHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHh-ccchHHHHHHHHHhcCCeeehHHHHHHhhccC
Confidence 347889999988 88888877777888999999999999987544
No 421
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=20.57 E-value=1.8e+02 Score=21.62 Aligned_cols=98 Identities=12% Similarity=0.128 Sum_probs=53.5
Q ss_pred cccHHHHHHHHHhcCCeEEEEEeCC-CCcchhhhhhccC-----CCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCC
Q 020843 166 NGSFEKAKDAASVQDKWLLVNLQST-KEFSSHMLNRDTW-----ANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDS 239 (320)
Q Consensus 166 ~gsf~~A~~~Ak~~~K~LLV~l~~~-~~f~c~~lnRdvw-----~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~ 239 (320)
..+..+|++.-.+.+.--+..+... ..+---.-.+|++ .+..|.++++. .+....+..-.+..++...+ .
T Consensus 23 ~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~~v~~~m~~-~~~v~~~~~l~~~~~~m~~~---~ 98 (129)
T 3jtf_A 23 SQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLEPALDIRSLVRP-AVFIPEVKRLNVLLREFRAS---R 98 (129)
T ss_dssp TSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTCTTSCGGGGCBC-CCEEETTCBHHHHHHHHHTS---S
T ss_pred CCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhccCCcCHHHHhCC-CeEeCCCCcHHHHHHHHHhc---C
Confidence 4688899888777553333223321 2221111122222 23356677654 44444443334555555444 6
Q ss_pred CcEEEEEecCCCceEEEEecCCChHHHHHHHHH
Q 020843 240 IPVVLVVDPITGQKMRSWCGMVQPESLLEDLVP 272 (320)
Q Consensus 240 ~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~ 272 (320)
.+++.|+|. .|+. .|.++..++++.|..
T Consensus 99 ~~~~pVvd~-~g~~----~Giit~~Dil~~l~g 126 (129)
T 3jtf_A 99 NHLAIVIDE-HGGI----SGLVTMEDVLEQIVG 126 (129)
T ss_dssp CCEEEEECC--CCE----EEEEEHHHHHHHHHH
T ss_pred CeEEEEEeC-CCCE----EEEEEHHHHHHHHhC
Confidence 788889995 4654 466778888887754
No 422
>3p04_A Uncharacterized BCR; SEPF homolog, DUF552, PSI-biology, NESG, structural genomics structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=20.45 E-value=49 Score=24.89 Aligned_cols=31 Identities=13% Similarity=0.066 Sum_probs=23.6
Q ss_pred CccccccccHHHHHHHHH--hcCCeEEEEEeCC
Q 020843 160 PFHLMFNGSFEKAKDAAS--VQDKWLLVNLQST 190 (320)
Q Consensus 160 pf~~~~~gsf~~A~~~Ak--~~~K~LLV~l~~~ 190 (320)
...++.--+|++|.+.|. +++|.++|||..-
T Consensus 6 ~Ivv~~P~sy~Da~~I~d~Lr~~~~VvvNL~~l 38 (87)
T 3p04_A 6 TIVPVELHSFEDAQVIGGAFRDGDAVVFDMSLL 38 (87)
T ss_dssp SCEEEECSSGGGHHHHHHHHHTTCCEEEECTTS
T ss_pred EEEEEecCcHHHHHHHHHHHHCCCEEEEECCCC
Confidence 334444568999988874 7999999999864
No 423
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=20.19 E-value=1.2e+02 Score=23.66 Aligned_cols=62 Identities=18% Similarity=0.146 Sum_probs=39.6
Q ss_pred CCCHHHHHHHhcceEEEEeecCChHHHHHHHHcCCCCCcEEEEEecCCCceEEEEecCCChHHHHHHHHHH
Q 020843 203 WANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMVQPESLLEDLVPF 273 (320)
Q Consensus 203 w~n~~V~~~l~~nFV~~q~d~~s~eg~~~~~~Y~v~~~P~i~Iidp~tG~~v~~~~G~~~~~~fl~~L~~f 273 (320)
+.+..|.+++.. ++.+..+..=.+..++...+ .+..+.|+|. .|+. .|.++..+++..+.+.
T Consensus 93 ~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~---~~~~lpVvd~-~g~~----vGiit~~dll~~l~~~ 154 (157)
T 1o50_A 93 LIAKNASEIMLD-PVYVHMDTPLEEALKLMIDN---NIQEMPVVDE-KGEI----VGDLNSLEILLALWKG 154 (157)
T ss_dssp CSSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHH---TCSEEEEECT-TSCE----EEEEEHHHHHHHHHHS
T ss_pred HcCCcHHHHcCC-CeEECCCCCHHHHHHHHHHC---CCcEEEEEcC-CCEE----EEEEEHHHHHHHHHHh
Confidence 455678888887 54444433335566666555 5677888984 4644 4667788888877653
Done!