Query 020844
Match_columns 320
No_of_seqs 240 out of 2231
Neff 9.6
Searched_HMMs 13730
Date Mon Mar 25 09:01:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020844.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/020844hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1u1qa_ d.58.7.1 (A:) Nuclear 100.0 8.6E-33 6.3E-37 225.5 18.4 166 32-233 5-176 (183)
2 d1b7fa1 d.58.7.1 (A:123-204) S 99.9 9.9E-24 7.2E-28 148.0 10.3 80 33-112 2-81 (82)
3 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.9 1.6E-23 1.2E-27 148.7 11.4 84 30-113 4-87 (88)
4 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.9 1.6E-23 1.1E-27 150.3 11.0 85 30-114 6-90 (93)
5 d2cq0a1 d.58.7.1 (A:231-320) E 99.9 3.7E-23 2.7E-27 147.5 11.9 84 31-114 6-89 (90)
6 d2cqba1 d.58.7.1 (A:1-89) Pept 99.9 1.8E-23 1.3E-27 148.9 9.8 82 32-113 4-85 (89)
7 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.9 4.5E-23 3.3E-27 147.9 12.0 83 31-113 5-87 (93)
8 d2cpza1 d.58.7.1 (A:383-484) C 99.9 3.2E-23 2.3E-27 151.3 11.2 85 31-115 16-100 (102)
9 d1cvja1 d.58.7.1 (A:11-90) Pol 99.9 2.7E-23 2E-27 144.8 10.2 78 35-112 2-79 (80)
10 d1whwa_ d.58.7.1 (A:) Probable 99.9 5.6E-23 4.1E-27 149.3 12.0 86 30-115 5-90 (99)
11 d2cqca1 d.58.7.1 (A:109-191) A 99.9 3.9E-23 2.8E-27 145.2 10.8 81 27-107 3-83 (83)
12 d1fxla1 d.58.7.1 (A:37-118) Hu 99.9 5E-23 3.7E-27 144.4 11.3 80 33-112 2-81 (82)
13 d2u2fa_ d.58.7.1 (A:) Splicing 99.9 2.4E-23 1.8E-27 146.7 9.0 81 34-114 2-82 (85)
14 d1b7fa2 d.58.7.1 (A:205-289) S 99.9 6.9E-23 5E-27 144.5 10.8 81 30-110 3-85 (85)
15 d2cqga1 d.58.7.1 (A:96-185) TA 99.9 1.2E-22 8.6E-27 144.4 11.1 84 30-115 5-88 (90)
16 d2cpha1 d.58.7.1 (A:454-547) P 99.9 1.3E-22 9.5E-27 145.7 11.0 84 31-114 6-91 (94)
17 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.9 7.3E-23 5.3E-27 146.1 9.5 85 31-115 3-87 (90)
18 d1fxla2 d.58.7.1 (A:119-203) H 99.9 1.1E-22 7.9E-27 143.4 9.9 79 32-110 5-85 (85)
19 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.9 1.9E-22 1.4E-26 141.7 10.8 80 31-111 4-83 (84)
20 d2cqda1 d.58.7.1 (A:1-103) RNA 99.9 2.2E-22 1.6E-26 147.0 11.6 85 30-115 7-91 (103)
21 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.9 2.6E-22 1.9E-26 143.0 11.4 84 29-114 4-87 (90)
22 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.9 2.6E-22 1.9E-26 155.2 12.3 86 30-115 39-124 (139)
23 d1no8a_ d.58.7.1 (A:) Nuclear 99.9 2.1E-22 1.5E-26 139.5 9.7 76 35-111 2-77 (78)
24 d1p1ta_ d.58.7.1 (A:) Cleavage 99.9 7.6E-23 5.5E-27 150.1 7.7 82 32-113 7-88 (104)
25 d2ghpa1 d.58.7.1 (A:116-196) U 99.9 1.7E-22 1.3E-26 141.2 9.0 80 33-112 1-80 (81)
26 d2cq3a1 d.58.7.1 (A:110-202) R 99.9 1.3E-21 9.6E-26 140.2 13.3 86 27-114 5-90 (93)
27 d1x4ba1 d.58.7.1 (A:8-110) Het 99.9 2.3E-22 1.7E-26 146.6 9.1 83 32-115 19-101 (103)
28 d1uawa_ d.58.7.1 (A:) Musashi- 99.9 1.1E-22 8E-27 140.3 6.8 76 34-110 1-76 (77)
29 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.9 4.3E-22 3.1E-26 139.8 9.5 79 36-114 1-80 (83)
30 d2cpfa1 d.58.7.1 (A:362-446) P 99.9 5.7E-22 4.1E-26 139.8 10.2 78 36-113 1-81 (85)
31 d1hd0a_ d.58.7.1 (A:) Heteroge 99.9 3.9E-22 2.9E-26 136.9 8.5 75 35-110 1-75 (75)
32 d2cq4a1 d.58.7.1 (A:132-232) R 99.9 2.9E-22 2.1E-26 145.6 7.6 80 32-112 17-96 (101)
33 d1l3ka2 d.58.7.1 (A:103-181) N 99.9 1.8E-21 1.3E-25 135.3 10.7 77 33-110 2-78 (79)
34 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.9 2.3E-21 1.7E-25 140.6 11.1 86 29-114 4-95 (98)
35 d2cpea1 d.58.7.1 (A:353-453) R 99.8 2.8E-21 2E-25 140.9 11.2 87 28-114 3-97 (101)
36 d1cvja2 d.58.7.1 (A:91-179) Po 99.8 1.5E-21 1.1E-25 138.7 9.1 80 33-114 8-87 (89)
37 d1x0fa1 d.58.7.1 (A:183-257) N 99.8 5.8E-22 4.2E-26 135.7 6.2 75 35-110 1-75 (75)
38 d2ghpa3 d.58.7.1 (A:206-291) U 99.8 1.3E-21 9.1E-26 138.2 7.7 81 32-113 3-85 (86)
39 d1x5oa1 d.58.7.1 (A:8-108) RNA 99.8 1.5E-21 1.1E-25 142.2 8.0 84 28-112 13-96 (101)
40 d2f9da1 d.58.7.1 (A:12-125) Pr 99.8 1.1E-20 7.9E-25 140.8 11.6 80 30-112 4-83 (114)
41 d2msta_ d.58.7.1 (A:) Neural R 99.8 3.4E-21 2.5E-25 132.5 8.0 75 35-110 1-75 (75)
42 d1fjeb1 d.58.7.1 (B:1-91) Nucl 99.8 8.1E-22 5.9E-26 140.5 4.0 83 28-112 8-90 (91)
43 d1zh5a2 d.58.7.1 (A:105-189) L 99.8 1.4E-20 9.9E-25 132.3 10.4 78 32-111 5-82 (85)
44 d1wi8a_ d.58.7.1 (A:) Eukaryot 99.8 2.8E-20 2.1E-24 136.2 12.3 86 28-115 10-96 (104)
45 d2cpxa1 d.58.7.1 (A:291-392) R 99.8 2.1E-21 1.5E-25 141.8 5.9 86 29-114 14-99 (102)
46 d1x4aa1 d.58.7.1 (A:9-103) Spl 99.8 3.4E-20 2.5E-24 133.3 11.5 82 29-113 10-91 (95)
47 d1x4ga1 d.58.7.1 (A:8-103) Nuc 99.8 2.1E-20 1.5E-24 134.4 9.9 77 32-114 17-93 (96)
48 d2disa1 d.58.7.1 (A:8-103) Hyp 99.8 2.8E-20 2E-24 134.1 9.0 84 33-116 1-88 (96)
49 d1wg5a_ d.58.7.1 (A:) Heteroge 99.8 8.8E-20 6.4E-24 133.4 11.7 88 27-115 9-96 (104)
50 d1x4ga1 d.58.7.1 (A:8-103) Nuc 99.8 7.2E-20 5.2E-24 131.6 10.7 75 154-233 18-92 (96)
51 d1x4ea1 d.58.7.1 (A:8-79) RNA- 99.8 1E-20 7.5E-25 128.9 5.8 71 36-106 1-71 (72)
52 d1wf2a_ d.58.7.1 (A:) Heteroge 99.8 7.8E-20 5.7E-24 131.9 10.8 78 28-113 10-88 (98)
53 d2cpia1 d.58.7.1 (A:101-189) E 99.8 2.3E-20 1.7E-24 132.3 7.7 76 33-108 8-89 (89)
54 d2b0ga1 d.58.7.1 (A:1-83) Spli 99.8 8.3E-20 6E-24 127.8 10.2 78 29-111 4-82 (83)
55 d1fjca_ d.58.7.1 (A:) Nucleoli 99.8 5.4E-20 3.9E-24 132.5 9.5 82 29-115 12-93 (96)
56 d2cqpa1 d.58.7.1 (A:917-1002) 99.8 5.3E-20 3.8E-24 129.8 9.0 78 32-110 8-86 (86)
57 d1weza_ d.58.7.1 (A:) Heteroge 99.8 8.8E-20 6.4E-24 132.8 10.1 84 29-115 11-94 (102)
58 d2cpja1 d.58.7.1 (A:65-150) No 99.8 1E-19 7.6E-24 128.0 9.9 76 33-114 8-83 (86)
59 d1nu4a_ d.58.7.1 (A:) Spliceso 99.8 5.6E-20 4.1E-24 131.0 8.4 80 32-114 2-85 (91)
60 d2cpda1 d.58.7.1 (A:223-308) A 99.8 1.8E-19 1.3E-23 127.0 10.6 77 32-114 7-83 (86)
61 d2adca1 d.58.7.1 (A:335-443) P 99.8 2.7E-19 2E-23 132.1 12.1 77 33-114 2-79 (109)
62 d1whxa_ d.58.7.1 (A:) Probable 99.8 9.3E-20 6.8E-24 135.1 9.5 79 30-114 7-85 (111)
63 d2adca2 d.58.7.1 (A:444-531) P 99.8 1.7E-19 1.2E-23 127.7 10.2 78 31-112 8-86 (88)
64 d2ghpa2 d.58.7.1 (A:41-115) U4 99.8 1.7E-19 1.2E-23 123.5 9.4 74 34-110 1-74 (75)
65 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.8 3.4E-19 2.5E-23 126.6 11.2 77 153-234 7-87 (90)
66 d1b7fa1 d.58.7.1 (A:123-204) S 99.8 1.6E-19 1.2E-23 126.1 9.4 73 155-232 3-81 (82)
67 d2bz2a1 d.58.7.1 (A:35-113) Ne 99.8 2.1E-19 1.6E-23 124.4 9.8 76 31-114 3-78 (79)
68 d2cqha1 d.58.7.1 (A:2-81) IGF- 99.8 9E-20 6.5E-24 126.6 7.5 75 35-115 3-78 (80)
69 d1wf0a_ d.58.7.1 (A:) TAR DNA- 99.8 1.2E-19 8.6E-24 128.4 8.2 78 31-115 3-80 (88)
70 d2b0ga1 d.58.7.1 (A:1-83) Spli 99.8 3.9E-19 2.8E-23 124.3 10.7 78 150-232 4-83 (83)
71 d2adba1 d.58.7.1 (A:177-284) P 99.8 2.7E-19 2E-23 131.6 10.0 81 30-114 4-86 (108)
72 d2cpya1 d.58.7.1 (A:536-638) R 99.8 1.6E-19 1.1E-23 131.9 8.6 82 30-112 5-86 (103)
73 d2cpja1 d.58.7.1 (A:65-150) No 99.8 2.3E-19 1.7E-23 126.2 9.2 75 155-234 9-83 (86)
74 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.8 3.4E-19 2.5E-23 126.0 10.1 76 153-233 6-87 (88)
75 d1fxla1 d.58.7.1 (A:37-118) Hu 99.8 3.7E-19 2.7E-23 124.3 9.7 73 155-232 3-81 (82)
76 d2cq3a1 d.58.7.1 (A:110-202) R 99.8 1.1E-18 8.1E-23 124.7 12.3 76 154-234 11-90 (93)
77 d1wg1a_ d.58.7.1 (A:) Probable 99.8 2.1E-19 1.5E-23 127.0 8.1 76 31-113 3-78 (88)
78 d1whwa_ d.58.7.1 (A:) Probable 99.8 1.6E-18 1.2E-22 125.4 12.7 77 154-235 8-90 (99)
79 d2cq1a1 d.58.7.1 (A:51-138) Po 99.8 1.1E-18 8.3E-23 123.3 11.4 82 27-114 2-85 (88)
80 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.8 8.6E-19 6.2E-23 125.2 10.8 75 155-234 10-90 (93)
81 d2cqba1 d.58.7.1 (A:1-89) Pept 99.8 3.3E-19 2.4E-23 126.4 8.2 76 154-234 5-86 (89)
82 d2cpza1 d.58.7.1 (A:383-484) C 99.8 7.5E-19 5.4E-23 127.8 10.2 79 152-235 16-100 (102)
83 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.8 1E-18 7.4E-23 124.8 10.5 75 154-233 7-87 (93)
84 d1whxa_ d.58.7.1 (A:) Probable 99.8 6.7E-19 4.9E-23 130.4 9.8 77 153-234 9-85 (111)
85 d2cpda1 d.58.7.1 (A:223-308) A 99.8 9.6E-19 7E-23 123.2 10.0 76 154-234 8-83 (86)
86 d3begb1 d.58.7.1 (B:121-207) S 99.8 1.2E-19 8.5E-24 128.2 5.2 72 35-113 2-73 (87)
87 d1x4aa1 d.58.7.1 (A:9-103) Spl 99.8 1.9E-18 1.4E-22 124.0 11.5 77 153-234 13-92 (95)
88 d1wg4a_ d.58.7.1 (A:) Splicing 99.8 9.1E-19 6.6E-23 126.2 9.7 79 29-114 11-89 (98)
89 d1whya_ d.58.7.1 (A:) Putative 99.8 1.3E-18 9.1E-23 125.4 10.4 79 30-114 14-94 (97)
90 d2bz2a1 d.58.7.1 (A:35-113) Ne 99.8 7.3E-19 5.3E-23 121.7 8.6 72 155-233 6-77 (79)
91 d2cpha1 d.58.7.1 (A:454-547) P 99.8 1.7E-18 1.2E-22 123.9 10.7 75 155-234 9-91 (94)
92 d1whya_ d.58.7.1 (A:) Putative 99.8 3E-18 2.2E-22 123.4 12.1 77 152-233 15-93 (97)
93 d1wi6a1 d.58.7.1 (A:69-143) Ri 99.8 1.5E-18 1.1E-22 118.6 9.8 71 36-113 1-71 (75)
94 d1cvja1 d.58.7.1 (A:11-90) Pol 99.8 1E-18 7.5E-23 121.2 9.2 72 156-232 2-79 (80)
95 d2cqha1 d.58.7.1 (A:2-81) IGF- 99.8 2.5E-19 1.9E-23 124.3 5.9 77 155-235 2-78 (80)
96 d2cq0a1 d.58.7.1 (A:231-320) E 99.8 1.2E-18 9E-23 123.7 9.7 75 154-233 8-88 (90)
97 d1wf2a_ d.58.7.1 (A:) Heteroge 99.8 1.5E-18 1.1E-22 125.1 10.0 75 153-234 14-89 (98)
98 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.8 9.1E-18 6.6E-22 129.2 15.2 78 153-235 41-124 (139)
99 d2cpfa1 d.58.7.1 (A:362-446) P 99.8 1.4E-18 9.9E-23 122.2 9.5 72 157-233 1-81 (85)
100 d1wexa_ d.58.7.1 (A:) Heteroge 99.8 5.1E-18 3.7E-22 123.8 12.9 84 27-116 9-94 (104)
101 d1no8a_ d.58.7.1 (A:) Nuclear 99.8 1.7E-18 1.2E-22 119.5 9.7 72 156-232 2-78 (78)
102 d1u1qa_ d.58.7.1 (A:) Nuclear 99.8 2.5E-18 1.8E-22 138.8 12.2 107 6-113 67-176 (183)
103 d1wela1 d.58.7.1 (A:412-523) R 99.8 4.5E-19 3.2E-23 131.3 6.7 83 29-112 14-96 (112)
104 d1wg1a_ d.58.7.1 (A:) Probable 99.8 1.1E-18 8.1E-23 123.2 8.3 74 155-234 6-79 (88)
105 d1weya_ d.58.7.1 (A:) Calcipre 99.8 1.8E-18 1.3E-22 125.8 9.6 79 154-237 5-88 (104)
106 d1cvja2 d.58.7.1 (A:91-179) Po 99.8 1.3E-18 9.8E-23 123.2 8.5 75 155-234 9-87 (89)
107 d2u2fa_ d.58.7.1 (A:) Splicing 99.7 1.6E-18 1.2E-22 121.5 8.7 74 155-233 2-81 (85)
108 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.7 2E-18 1.5E-22 122.6 9.3 76 155-235 6-87 (90)
109 d2cqda1 d.58.7.1 (A:1-103) RNA 99.7 5.6E-18 4.1E-22 123.3 11.8 77 152-234 8-90 (103)
110 d1wexa_ d.58.7.1 (A:) Heteroge 99.7 1.4E-17 1E-21 121.4 13.7 79 151-234 12-92 (104)
111 d2adca2 d.58.7.1 (A:444-531) P 99.7 3.2E-18 2.3E-22 121.1 9.8 77 152-233 8-87 (88)
112 d2ghpa1 d.58.7.1 (A:116-196) U 99.7 2.2E-18 1.6E-22 119.9 8.5 73 155-232 2-80 (81)
113 d2cq1a1 d.58.7.1 (A:51-138) Po 99.7 5.9E-18 4.3E-22 119.6 10.8 79 151-234 5-85 (88)
114 d1x4fa1 d.58.7.1 (A:8-106) Mat 99.7 3E-18 2.2E-22 123.7 9.3 80 29-114 14-96 (99)
115 d1fxla2 d.58.7.1 (A:119-203) H 99.7 3.6E-18 2.6E-22 119.8 9.1 71 155-230 7-85 (85)
116 d2f9da1 d.58.7.1 (A:12-125) Pr 99.7 6.4E-18 4.7E-22 125.5 10.8 74 154-232 7-83 (114)
117 d1b7fa2 d.58.7.1 (A:205-289) S 99.7 4.5E-18 3.3E-22 119.4 9.4 71 155-230 7-85 (85)
118 d1x4da1 d.58.7.1 (A:8-96) Matr 99.7 6.4E-18 4.6E-22 119.4 10.1 80 29-114 4-86 (89)
119 d2adca1 d.58.7.1 (A:335-443) P 99.7 9.1E-18 6.6E-22 123.7 11.2 76 154-234 2-79 (109)
120 d1wi6a1 d.58.7.1 (A:69-143) Ri 99.7 8.4E-18 6.1E-22 114.8 9.8 71 157-233 1-71 (75)
121 d2cqca1 d.58.7.1 (A:109-191) A 99.7 6.4E-18 4.7E-22 118.1 9.0 70 153-227 8-83 (83)
122 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.7 6.2E-18 4.5E-22 118.2 8.2 74 157-235 1-81 (83)
123 d2cpea1 d.58.7.1 (A:353-453) R 99.7 1.2E-17 8.7E-22 121.3 9.9 81 150-235 4-98 (101)
124 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.7 1.8E-17 1.3E-21 119.7 10.6 77 153-234 7-95 (98)
125 d1fjca_ d.58.7.1 (A:) Nucleoli 99.7 7.9E-18 5.8E-22 120.9 8.6 79 152-235 14-93 (96)
126 d1p1ta_ d.58.7.1 (A:) Cleavage 99.7 2.4E-18 1.7E-22 125.7 5.8 76 153-233 7-88 (104)
127 d1nu4a_ d.58.7.1 (A:) Spliceso 99.7 1.4E-17 1E-21 118.4 9.3 77 153-234 2-85 (91)
128 d1wf0a_ d.58.7.1 (A:) TAR DNA- 99.7 4.9E-18 3.6E-22 119.9 6.8 75 154-235 5-80 (88)
129 d1wg4a_ d.58.7.1 (A:) Splicing 99.7 1.5E-17 1.1E-21 119.7 9.5 77 152-234 13-89 (98)
130 d2ghpa3 d.58.7.1 (A:206-291) U 99.7 9E-18 6.6E-22 118.0 7.7 73 155-233 5-85 (86)
131 d3begb1 d.58.7.1 (B:121-207) S 99.7 4.4E-18 3.2E-22 119.9 6.0 72 156-233 2-73 (87)
132 d2cqga1 d.58.7.1 (A:96-185) TA 99.7 2.9E-17 2.1E-21 116.1 10.3 73 155-234 9-87 (90)
133 d1x4ba1 d.58.7.1 (A:8-110) Het 99.7 2E-17 1.5E-21 120.0 9.1 75 154-234 20-100 (103)
134 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.7 3.4E-17 2.5E-21 114.4 9.9 71 155-231 7-83 (84)
135 d1uawa_ d.58.7.1 (A:) Musashi- 99.7 4.9E-18 3.5E-22 116.6 5.3 70 155-230 1-76 (77)
136 d1hd0a_ d.58.7.1 (A:) Heteroge 99.7 2.1E-17 1.5E-21 113.0 8.4 69 156-230 1-75 (75)
137 d1x4fa1 d.58.7.1 (A:8-106) Mat 99.7 2.5E-17 1.8E-21 118.8 9.0 77 153-234 17-96 (99)
138 d1u2fa_ d.58.7.1 (A:) Splicing 99.7 2E-19 1.5E-23 127.9 -2.1 77 34-111 2-83 (90)
139 d2disa1 d.58.7.1 (A:8-103) Hyp 99.7 4.1E-17 3E-21 117.1 9.5 80 154-235 1-87 (96)
140 d2cq4a1 d.58.7.1 (A:132-232) R 99.7 2.4E-17 1.8E-21 119.2 8.1 72 154-231 18-95 (101)
141 d2cpxa1 d.58.7.1 (A:291-392) R 99.7 1.7E-17 1.2E-21 120.7 6.9 78 153-235 17-100 (102)
142 d1l3ka2 d.58.7.1 (A:103-181) N 99.7 5.6E-17 4.1E-21 112.1 9.3 70 155-230 3-78 (79)
143 d1x4da1 d.58.7.1 (A:8-96) Matr 99.7 7.1E-17 5.1E-21 113.9 9.7 76 153-233 7-85 (89)
144 d2adba1 d.58.7.1 (A:177-284) P 99.7 6.2E-17 4.5E-21 118.8 9.7 77 153-234 6-86 (108)
145 d1wi8a_ d.58.7.1 (A:) Eukaryot 99.7 1.7E-16 1.3E-20 115.6 12.0 76 153-235 14-96 (104)
146 d1jmta_ d.58.7.3 (A:) d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=8.6e-33 Score=225.47 Aligned_cols=166 Identities=25% Similarity=0.427 Sum_probs=142.0
Q ss_pred CceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEecc
Q 020844 32 GHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 111 (320)
Q Consensus 32 ~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a~ 111 (320)
..|+|||+|||+++||++|+++|++||.|.++.++++..++.++|||||+|.+.++|.+|+. +++..+.++.+.+.+..
T Consensus 5 ~~r~lfV~nLp~~~te~~L~~~F~~~G~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~-~~~~~~~~~~~~~~~~~ 83 (183)
T d1u1qa_ 5 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKRAV 83 (183)
T ss_dssp HHHEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEECC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHcCCEEEEEeeecccCCCccCceecccCCHHHHHHHHH-hcCCcccccchhhhhhh
Confidence 35899999999999999999999999999999999999999999999999999999999995 56777888888887665
Q ss_pred CCCCCCCcccCCccccccccCCCCCCCCCCCCCCCCCCCCCcceEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC
Q 020844 112 KGAGNNEDKQSSDAKSVVELTNGSSEDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD 191 (320)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~ 191 (320)
....... .......++|||+|||.++|+++|+++|+.|| .|..+.+..+
T Consensus 84 ~~~~~~~-----------------------------~~~~~~~~~i~V~~lp~~~te~~L~~~f~~~G--~v~~~~i~~~ 132 (183)
T d1u1qa_ 84 SREDSQR-----------------------------PGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYG--KIEVIEIMTD 132 (183)
T ss_dssp CTTGGGS-----------------------------TTTTCCCSEEEEECCCTTCCHHHHHHHHGGGS--CEEEEEEEEC
T ss_pred hcccccc-----------------------------cccccccceeEEccCCCcCCHHHHhhhhccCC--ceeeeeeecc
Confidence 4322111 11122337899999999999999999999999 8999988753
Q ss_pred ------CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEEecCCC
Q 020844 192 ------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKP 233 (320)
Q Consensus 192 ------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~~a~~~ 233 (320)
+|+|||+|.+.++|.+|++ +++. .+.|+.|+|.++.++
T Consensus 133 ~~~~~~~g~~fV~f~~~e~A~~Al~-~~~~---~~~G~~i~V~~A~~k 176 (183)
T d1u1qa_ 133 RGSGKKRGFAFVTFDDHDSVDKIVI-QKYH---TVNGHNCEVRKALSK 176 (183)
T ss_dssp TTTCCEEEEEEEEESCHHHHHHHHT-SSCE---EETTEEEEEEECCCH
T ss_pred cccCccceeEEEEECCHHHHHHHHH-hCCC---eECCEEEEEEecCCc
Confidence 6899999999999999997 6888 899999999998643
No 2
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.90 E-value=9.9e-24 Score=148.01 Aligned_cols=80 Identities=33% Similarity=0.542 Sum_probs=77.4
Q ss_pred ceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEeccC
Q 020844 33 HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 112 (320)
Q Consensus 33 ~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a~~ 112 (320)
+++|||+|||+++|+++|+++|++||.|.+++|++++.+|.++|||||+|.+.++|.+|++.|||..+.|++|+|.|+++
T Consensus 2 ~t~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~~a~p 81 (82)
T d1b7fa1 2 NTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARP 81 (82)
T ss_dssp CSEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999875
No 3
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.90 E-value=1.6e-23 Score=148.69 Aligned_cols=84 Identities=20% Similarity=0.408 Sum_probs=79.3
Q ss_pred CCCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEe
Q 020844 30 TSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 109 (320)
Q Consensus 30 ~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~ 109 (320)
+..+++|||+|||.++|+++|+++|+.||+|.+|+|++|+.+|.++|||||+|.+.++|.+|++.|||..+.|++|+|+|
T Consensus 4 s~~~~~l~V~nL~~~~t~~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g~~l~V~~ 83 (88)
T d1rk8a_ 4 SVEGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDW 83 (88)
T ss_dssp CC-CEEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 34578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCC
Q 020844 110 ATKG 113 (320)
Q Consensus 110 a~~~ 113 (320)
+.++
T Consensus 84 a~~k 87 (88)
T d1rk8a_ 84 CFVK 87 (88)
T ss_dssp SEEC
T ss_pred ecCC
Confidence 8764
No 4
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=1.6e-23 Score=150.31 Aligned_cols=85 Identities=27% Similarity=0.409 Sum_probs=80.7
Q ss_pred CCCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEe
Q 020844 30 TSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 109 (320)
Q Consensus 30 ~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~ 109 (320)
...+++|||+|||.++|+++|+++|++||.|.+++|++|+.+|.++|||||+|.+.++|++|++.|||..+.|++|+|.|
T Consensus 6 ~~~~~tlfV~nLp~~~t~~~l~~~F~~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~ 85 (93)
T d1x5ua1 6 RNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVNK 85 (93)
T ss_dssp CCTTTEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCBCEEEE
T ss_pred CCCCCEEEEeCCCCcCCHHHHHHHHHHhCCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 44567999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCC
Q 020844 110 ATKGA 114 (320)
Q Consensus 110 a~~~~ 114 (320)
+.++.
T Consensus 86 A~~~~ 90 (93)
T d1x5ua1 86 ASAHN 90 (93)
T ss_dssp TTTTS
T ss_pred cCCCC
Confidence 98764
No 5
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=3.7e-23 Score=147.51 Aligned_cols=84 Identities=29% Similarity=0.457 Sum_probs=79.8
Q ss_pred CCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEec
Q 020844 31 SGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 110 (320)
Q Consensus 31 ~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a 110 (320)
.++.+|||+|||.++|+++|+++|+.||.|.+++|++|+.+|.++|||||+|.+.++|.+|++.|+|..+.|+.|+|.|+
T Consensus 6 ~~~~~i~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~v~~a 85 (90)
T d2cq0a1 6 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWA 85 (90)
T ss_dssp SSSEEEEEESCCTTCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECCEEEEEEee
Confidence 35679999999999999999999999999999999999989999999999999999999999999999999999999999
Q ss_pred cCCC
Q 020844 111 TKGA 114 (320)
Q Consensus 111 ~~~~ 114 (320)
.++.
T Consensus 86 kp~~ 89 (90)
T d2cq0a1 86 KPST 89 (90)
T ss_dssp SCCC
T ss_pred eCCC
Confidence 8653
No 6
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=1.8e-23 Score=148.91 Aligned_cols=82 Identities=34% Similarity=0.500 Sum_probs=78.8
Q ss_pred CceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEecc
Q 020844 32 GHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 111 (320)
Q Consensus 32 ~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a~ 111 (320)
.+++|||+|||+++|+++|+++|+.||+|.+++|++|+.+|.++|||||+|.+.++|.+|++.||+..+.|++|+|.++.
T Consensus 4 ~~~tlfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v~~a~ 83 (89)
T d2cqba1 4 TKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAK 83 (89)
T ss_dssp CCSCEEEESCCSSCCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred CCcEEEEeCCCCcCCHHHHHHHHhhCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred CC
Q 020844 112 KG 113 (320)
Q Consensus 112 ~~ 113 (320)
++
T Consensus 84 p~ 85 (89)
T d2cqba1 84 PM 85 (89)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 7
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=4.5e-23 Score=147.86 Aligned_cols=83 Identities=25% Similarity=0.422 Sum_probs=79.2
Q ss_pred CCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEec
Q 020844 31 SGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 110 (320)
Q Consensus 31 ~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a 110 (320)
..+++|||+|||+++||++|+++|++||+|.+|+|++++.++.++|||||+|.+.++|..|++.|||..+.|++|+|.|+
T Consensus 5 ~~s~tlfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V~~a 84 (93)
T d1h2vz_ 5 KKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWD 84 (93)
T ss_dssp TTCCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTEECEEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 35779999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCC
Q 020844 111 TKG 113 (320)
Q Consensus 111 ~~~ 113 (320)
...
T Consensus 85 ~~~ 87 (93)
T d1h2vz_ 85 AGF 87 (93)
T ss_dssp SCC
T ss_pred CCC
Confidence 654
No 8
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=3.2e-23 Score=151.30 Aligned_cols=85 Identities=28% Similarity=0.470 Sum_probs=80.7
Q ss_pred CCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEec
Q 020844 31 SGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 110 (320)
Q Consensus 31 ~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a 110 (320)
.++++|||+|||+++||++|+++|+.||.|.+++++.++.+|.++|||||+|.+.++|..|++.|||..+.|++|+|.|+
T Consensus 16 p~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~~i~V~~a 95 (102)
T d2cpza1 16 PEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLK 95 (102)
T ss_dssp STTCCEEEESCCSSCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEECEEECC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCEEEEEEEe
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCC
Q 020844 111 TKGAG 115 (320)
Q Consensus 111 ~~~~~ 115 (320)
.++..
T Consensus 96 ~~k~~ 100 (102)
T d2cpza1 96 RSKND 100 (102)
T ss_dssp CCSCC
T ss_pred CCCCC
Confidence 87654
No 9
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=2.7e-23 Score=144.84 Aligned_cols=78 Identities=32% Similarity=0.589 Sum_probs=75.7
Q ss_pred eEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEeccC
Q 020844 35 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 112 (320)
Q Consensus 35 ~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a~~ 112 (320)
+|||+|||+++||++|+++|++||+|.+++|++|+.+|+++|||||+|.+.++|..|++.|+|..+.|++|+|.|+..
T Consensus 2 slfV~nL~~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~gr~i~v~~a~~ 79 (80)
T d1cvja1 2 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQR 79 (80)
T ss_dssp EEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETTEECEEEECCC
T ss_pred EEEEeCCCCcCCHHHHHHHHHHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeCC
Confidence 699999999999999999999999999999999999999999999999999999999999999999999999999854
No 10
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.89 E-value=5.6e-23 Score=149.32 Aligned_cols=86 Identities=27% Similarity=0.349 Sum_probs=81.1
Q ss_pred CCCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEe
Q 020844 30 TSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 109 (320)
Q Consensus 30 ~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~ 109 (320)
+..+++|||+|||+++|+++|+++|++||.|.+++|++|+.+++++|||||+|.+.++|..|++.||+..+.|++|+|.+
T Consensus 5 ~~~~~~lfV~nL~~~~t~~~l~~~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr~i~V~~ 84 (99)
T d1whwa_ 5 SSGSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLP 84 (99)
T ss_dssp CCSCEEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSCEEEEEE
T ss_pred CCCCCEEEEECCCCcCCHHHHHHHHHhcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 44577899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCC
Q 020844 110 ATKGAG 115 (320)
Q Consensus 110 a~~~~~ 115 (320)
+..+..
T Consensus 85 a~~~~~ 90 (99)
T d1whwa_ 85 STIKKE 90 (99)
T ss_dssp CCCCST
T ss_pred CCCCCc
Confidence 987643
No 11
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=3.9e-23 Score=145.18 Aligned_cols=81 Identities=36% Similarity=0.487 Sum_probs=77.1
Q ss_pred CcCCCCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEE
Q 020844 27 REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 106 (320)
Q Consensus 27 ~~~~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~ 106 (320)
++++.++++|||+|||+++||++|+++|++||.|.+++|++++.++.++|||||+|.+.++|.+|++.|||..+.|++|+
T Consensus 3 r~~p~~~~~l~V~nL~~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~ 82 (83)
T d2cqca1 3 RANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIR 82 (83)
T ss_dssp CCSCCGGGCEEEESCCSSCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEE
T ss_pred CCCCCCCCEEEEeCCCCCCCHHHHHHHHHHhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEECCEEeE
Confidence 45566789999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred E
Q 020844 107 C 107 (320)
Q Consensus 107 v 107 (320)
|
T Consensus 83 V 83 (83)
T d2cqca1 83 V 83 (83)
T ss_dssp E
T ss_pred C
Confidence 7
No 12
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=5e-23 Score=144.38 Aligned_cols=80 Identities=29% Similarity=0.508 Sum_probs=76.9
Q ss_pred ceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEeccC
Q 020844 33 HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 112 (320)
Q Consensus 33 ~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a~~ 112 (320)
.++|||+|||+++||++|+++|++||.|.++++++|..+|.++|||||+|.+.++|++|++.|||..+.|++|+|.|+.+
T Consensus 2 ~t~l~V~nLp~~~te~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~AkP 81 (82)
T d1fxla1 2 KTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 81 (82)
T ss_dssp CSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 45799999999999999999999999999999999988999999999999999999999999999999999999999865
No 13
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=2.4e-23 Score=146.72 Aligned_cols=81 Identities=23% Similarity=0.435 Sum_probs=77.8
Q ss_pred eeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEeccCC
Q 020844 34 FNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 113 (320)
Q Consensus 34 ~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a~~~ 113 (320)
.+|||+|||+++||++|+++|++||+|.+++|++|+.||.++|||||+|.++++|..|++.|||..+.|++|.|.++...
T Consensus 2 ~rlfV~nlp~~~te~~l~~~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~~l~V~~A~~~ 81 (85)
T d2u2fa_ 2 HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVG 81 (85)
T ss_dssp CCEEEETCCSSCCSHHHHHHHTSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSSCCEEEECCCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCC
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999765
Q ss_pred C
Q 020844 114 A 114 (320)
Q Consensus 114 ~ 114 (320)
.
T Consensus 82 ~ 82 (85)
T d2u2fa_ 82 A 82 (85)
T ss_dssp C
T ss_pred C
Confidence 3
No 14
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.88 E-value=6.9e-23 Score=144.51 Aligned_cols=81 Identities=28% Similarity=0.462 Sum_probs=76.3
Q ss_pred CCCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCC--eeEEE
Q 020844 30 TSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGS--RQIRC 107 (320)
Q Consensus 30 ~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g--~~l~v 107 (320)
+..+++|||+|||+++||++|+++|++||+|.+++|++|+.+|.++|||||+|.+.++|.+|++.|||..+.| ++|+|
T Consensus 3 ~~~~t~lfV~nlp~~~te~~l~~~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V 82 (85)
T d1b7fa2 3 SIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSV 82 (85)
T ss_dssp TTTTCEEEEESCCTTCCHHHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEE
Confidence 3456789999999999999999999999999999999999999999999999999999999999999999976 88999
Q ss_pred Eec
Q 020844 108 NWA 110 (320)
Q Consensus 108 ~~a 110 (320)
.||
T Consensus 83 ~~A 85 (85)
T d1b7fa2 83 RLA 85 (85)
T ss_dssp EEC
T ss_pred EEC
Confidence 986
No 15
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=1.2e-22 Score=144.42 Aligned_cols=84 Identities=24% Similarity=0.361 Sum_probs=76.8
Q ss_pred CCCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEe
Q 020844 30 TSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 109 (320)
Q Consensus 30 ~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~ 109 (320)
....++|||+|||+++||++|+++|+.||.|.+|+|++|+.+|.++|||||+|.+.++|.+|++. +..+.|+.|.|.+
T Consensus 5 ~~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~--~~~l~Gr~i~v~~ 82 (90)
T d2cqga1 5 VQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ--RHMIDGRWCDCKL 82 (90)
T ss_dssp CCCCCCEEEESCCSSCCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHS--CEEETTEEEEEEC
T ss_pred CcCCCeEEEECCCCCCCHHHHHHHHHhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhc--CCccCCEEeEEEe
Confidence 34567899999999999999999999999999999999999999999999999999999999974 4579999999999
Q ss_pred ccCCCC
Q 020844 110 ATKGAG 115 (320)
Q Consensus 110 a~~~~~ 115 (320)
+.++..
T Consensus 83 a~~k~~ 88 (90)
T d2cqga1 83 PNSKQS 88 (90)
T ss_dssp CCTTCC
T ss_pred CCCCCC
Confidence 887543
No 16
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.88 E-value=1.3e-22 Score=145.74 Aligned_cols=84 Identities=29% Similarity=0.455 Sum_probs=78.1
Q ss_pred CCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCC-CCCccceEEEEecCHHHHHHHHHHh-CCCeeCCeeEEEE
Q 020844 31 SGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQK-TGRSRGFGFVSFRNQQDAQSAINDL-TGKWLGSRQIRCN 108 (320)
Q Consensus 31 ~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~-~g~~~G~afV~f~~~~~A~~A~~~l-~~~~~~g~~l~v~ 108 (320)
..+++|||+|||++++|++|+++|+.||.|.+++|+++.. +|.++|||||+|.+.++|.+|++.| |+..+.|++|.|.
T Consensus 6 ~~~~~l~V~nLp~~~~e~~l~~~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l~V~ 85 (94)
T d2cpha1 6 QTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLE 85 (94)
T ss_dssp SCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBCEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCEEEEEE
Confidence 4567899999999999999999999999999999998754 7999999999999999999999998 8999999999999
Q ss_pred eccCCC
Q 020844 109 WATKGA 114 (320)
Q Consensus 109 ~a~~~~ 114 (320)
|+....
T Consensus 86 ~A~~~~ 91 (94)
T d2cpha1 86 WADSEV 91 (94)
T ss_dssp ECCCCC
T ss_pred EcCCCC
Confidence 998754
No 17
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=7.3e-23 Score=146.13 Aligned_cols=85 Identities=41% Similarity=0.601 Sum_probs=80.1
Q ss_pred CCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEec
Q 020844 31 SGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 110 (320)
Q Consensus 31 ~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a 110 (320)
+++++|||+|||+++|+++|+++|+.||.|..+.+++++.+|.++|||||+|.++++|..|++.|+|..+.|++|+|.++
T Consensus 3 ~~~~kifV~nLp~~~t~~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~a 82 (90)
T d1x5sa1 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA 82 (90)
T ss_dssp CCCSEEEEESCCTTCCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCCEEEEE
T ss_pred CCCCEEEEECCCCcCCHHHHHHhhhccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEc
Confidence 45678999999999999999999999999999999999889999999999999999999999999999999999999999
Q ss_pred cCCCC
Q 020844 111 TKGAG 115 (320)
Q Consensus 111 ~~~~~ 115 (320)
.++..
T Consensus 83 ~~~~~ 87 (90)
T d1x5sa1 83 GKSSD 87 (90)
T ss_dssp ECCCC
T ss_pred CCCCC
Confidence 77654
No 18
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=1.1e-22 Score=143.39 Aligned_cols=79 Identities=33% Similarity=0.515 Sum_probs=74.6
Q ss_pred CceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCC--eeEEEEe
Q 020844 32 GHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGS--RQIRCNW 109 (320)
Q Consensus 32 ~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g--~~l~v~~ 109 (320)
.+++|||+|||+++||++|+++|++||+|.+++|++|+.+|.++|||||+|.+.++|.+|++.|||..+.| ++|+|.|
T Consensus 5 k~~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~~ 84 (85)
T d1fxla2 5 RDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKF 84 (85)
T ss_dssp TTCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEEe
Confidence 35789999999999999999999999999999999999899999999999999999999999999999987 5699988
Q ss_pred c
Q 020844 110 A 110 (320)
Q Consensus 110 a 110 (320)
|
T Consensus 85 A 85 (85)
T d1fxla2 85 A 85 (85)
T ss_dssp C
T ss_pred C
Confidence 6
No 19
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=1.9e-22 Score=141.70 Aligned_cols=80 Identities=33% Similarity=0.499 Sum_probs=75.4
Q ss_pred CCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEec
Q 020844 31 SGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 110 (320)
Q Consensus 31 ~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a 110 (320)
+..++|||+|||+++||++|+++|+.||.|.+++|++|+.+|.++|||||+|.+.++|.+|++ +++..+.|+.|+|..|
T Consensus 4 e~~~~lfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i~Gr~i~V~~A 82 (84)
T d1l3ka1 4 EQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKRA 82 (84)
T ss_dssp GGGGEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEEC
T ss_pred CCCcEEEEECCCCCCCHHHHHHHHHhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEee
Confidence 346799999999999999999999999999999999999999999999999999999999995 6999999999999877
Q ss_pred c
Q 020844 111 T 111 (320)
Q Consensus 111 ~ 111 (320)
.
T Consensus 83 ~ 83 (84)
T d1l3ka1 83 V 83 (84)
T ss_dssp C
T ss_pred e
Confidence 4
No 20
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=2.2e-22 Score=147.04 Aligned_cols=85 Identities=34% Similarity=0.510 Sum_probs=78.0
Q ss_pred CCCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEe
Q 020844 30 TSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 109 (320)
Q Consensus 30 ~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~ 109 (320)
+...++|||+|||+++||++|+++|+.||.|.+++|++|+.+|+++|||||+|.+.++|.+|++.+++ .+.|++|+|.+
T Consensus 7 d~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~-~l~Gr~l~V~~ 85 (103)
T d2cqda1 7 DTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP-IIDGRKANVNL 85 (103)
T ss_dssp SCSSSEEEEECCCSSCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC-EETTEECEEEE
T ss_pred CCCCcEEEEeCCCCcCcHHHHHHHHhhcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCC-cCCCEEEEEEE
Confidence 34457899999999999999999999999999999999999999999999999999999999988775 79999999999
Q ss_pred ccCCCC
Q 020844 110 ATKGAG 115 (320)
Q Consensus 110 a~~~~~ 115 (320)
+..+..
T Consensus 86 a~~~~~ 91 (103)
T d2cqda1 86 AYLGAK 91 (103)
T ss_dssp STTTCC
T ss_pred cCCCCC
Confidence 876543
No 21
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=2.6e-22 Score=143.05 Aligned_cols=84 Identities=25% Similarity=0.559 Sum_probs=77.2
Q ss_pred CCCCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEE
Q 020844 29 DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 108 (320)
Q Consensus 29 ~~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~ 108 (320)
++.+.++|||+|||.++||++|+++|+.||+|.+|+|++++.+ .+|||||+|.+.++|..|++.|+|..+.|+.|+|.
T Consensus 4 d~~~~~tl~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~--~~~~afV~f~~~~~A~~A~~~l~~~~~~g~~i~v~ 81 (90)
T d2cqia1 4 DDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTS--NDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVN 81 (90)
T ss_dssp CSCCCCEEEEESCCTTCCHHHHHHHHHHHSCEEEEEEECCCCS--SCCEEEEEESSHHHHHHHHHHHTTEEETTEEEEEE
T ss_pred CCCCCCEEEEECCCCCCCHHHHHHHHHhcCCceeeeeecccCc--cceeeEEEECCHHHHHHHHHHcCCCEECCEEEEEE
Confidence 4556789999999999999999999999999999999998654 48999999999999999999999999999999999
Q ss_pred eccCCC
Q 020844 109 WATKGA 114 (320)
Q Consensus 109 ~a~~~~ 114 (320)
|+.++.
T Consensus 82 ~a~~~~ 87 (90)
T d2cqia1 82 WATTPS 87 (90)
T ss_dssp ECCCTT
T ss_pred EcCCCC
Confidence 997654
No 22
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.87 E-value=2.6e-22 Score=155.18 Aligned_cols=86 Identities=27% Similarity=0.445 Sum_probs=80.6
Q ss_pred CCCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEe
Q 020844 30 TSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 109 (320)
Q Consensus 30 ~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~ 109 (320)
....++|||+|||+++||++|+++|+.||.|.+|+|++|+.||+++|||||+|.+.++|..|++.|||..|.|++|+|.+
T Consensus 39 ~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr~l~V~~ 118 (139)
T d1u6fa1 39 PDVLRNLMVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKRLKVAL 118 (139)
T ss_dssp TTTTSEEEEESCSTTCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCEEEEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 44567999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCC
Q 020844 110 ATKGAG 115 (320)
Q Consensus 110 a~~~~~ 115 (320)
+..+..
T Consensus 119 a~~~~~ 124 (139)
T d1u6fa1 119 AASGHQ 124 (139)
T ss_dssp SSCCCC
T ss_pred cCCCCC
Confidence 876543
No 23
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.87 E-value=2.1e-22 Score=139.45 Aligned_cols=76 Identities=29% Similarity=0.431 Sum_probs=73.6
Q ss_pred eEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEecc
Q 020844 35 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 111 (320)
Q Consensus 35 ~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a~ 111 (320)
+|||+|||+++||++|+++|++||.|.+++|.+++ +|+++|||||+|.+.++|.+|++.|||..+.|++|+|++++
T Consensus 2 rl~V~nLp~~~~~~~l~~~F~~~G~v~~~~i~~~~-~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~a~ 77 (78)
T d1no8a_ 2 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDR-SGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVT 77 (78)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHSCEEEEEESCSS-CCCSCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEEC
T ss_pred EEEEECCCCCCCHHHHHHHHHHhCCCeEEEEEEee-ccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEee
Confidence 69999999999999999999999999999999996 89999999999999999999999999999999999999875
No 24
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=7.6e-23 Score=150.07 Aligned_cols=82 Identities=29% Similarity=0.561 Sum_probs=78.4
Q ss_pred CceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEecc
Q 020844 32 GHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 111 (320)
Q Consensus 32 ~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a~ 111 (320)
..++|||+|||+++||++|+++|+.||+|.+|+|++++.+|.++|||||+|.+.++|.+|++.|++..+.|++|+|.++.
T Consensus 7 ~~rtl~V~nLp~~~te~~l~~~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~~i~V~~a~ 86 (104)
T d1p1ta_ 7 SLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAA 86 (104)
T ss_dssp HHSCEEEESCCTTSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSCBEEEETT
T ss_pred CCCEEEEECCCCcCCHHHHHHhhhccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECC
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CC
Q 020844 112 KG 113 (320)
Q Consensus 112 ~~ 113 (320)
..
T Consensus 87 ~~ 88 (104)
T d1p1ta_ 87 SE 88 (104)
T ss_dssp CT
T ss_pred CC
Confidence 64
No 25
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.87 E-value=1.7e-22 Score=141.17 Aligned_cols=80 Identities=11% Similarity=0.213 Sum_probs=70.0
Q ss_pred ceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEeccC
Q 020844 33 HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 112 (320)
Q Consensus 33 ~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a~~ 112 (320)
+++|||+|||+++|+++|+++|+.||.|..+.++.++.+|.++|||||+|.+.++|.+|++.|||..+.|++|+|.+++|
T Consensus 1 d~tl~v~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~a~P 80 (81)
T d2ghpa1 1 ECTLWMTNFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSNP 80 (81)
T ss_dssp SCEEEEECCCTTCCHHHHHHHHHHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CcEEEEECCCCcCCHHHHHHHHHHhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEEEEEEccC
Confidence 36899999999999999999999999999998888888999999999999999999999999999999999999999875
No 26
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=1.3e-21 Score=140.17 Aligned_cols=86 Identities=29% Similarity=0.457 Sum_probs=78.6
Q ss_pred CcCCCCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEE
Q 020844 27 REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 106 (320)
Q Consensus 27 ~~~~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~ 106 (320)
.+.....++|||+|||+++|+++|+++|+.||+|.+|+++.++ +.++|||||+|.+.++|.+|++.||+..+.|++|+
T Consensus 5 ~~~~~~~~~l~v~nLp~~~t~~~L~~~F~~~G~v~~v~~~~~~--~~~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~ 82 (93)
T d2cq3a1 5 SESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNE--RGSKGFGFVTFENSADADRAREKLHGTVVEGRKIE 82 (93)
T ss_dssp SCCSCCCCEEEEESCCTTCCHHHHHHHGGGTSCEEEEEEECCT--TTTCCEEEEEESCHHHHHHHHHHHTTCEETTEECE
T ss_pred CCCCCCCCEEEEECCCCCCCHHHHHHHHhhcceeeeccccccc--cCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEE
Confidence 3455567799999999999999999999999999999999885 34799999999999999999999999999999999
Q ss_pred EEeccCCC
Q 020844 107 CNWATKGA 114 (320)
Q Consensus 107 v~~a~~~~ 114 (320)
|.|+.++.
T Consensus 83 V~~A~~r~ 90 (93)
T d2cq3a1 83 VNNATARV 90 (93)
T ss_dssp EEECCSSC
T ss_pred EEecCcCC
Confidence 99998754
No 27
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=2.3e-22 Score=146.55 Aligned_cols=83 Identities=28% Similarity=0.440 Sum_probs=77.8
Q ss_pred CceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEecc
Q 020844 32 GHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 111 (320)
Q Consensus 32 ~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a~ 111 (320)
..++|||+|||+++|+++|+++|++||.|.++.|++|+.++.++|||||+|.+.++|.+|+ .+++..|.|+.|.|.++.
T Consensus 19 ~~~~lfVgnLp~~~te~~L~~~F~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al-~~~~~~l~G~~i~V~~a~ 97 (103)
T d1x4ba1 19 QFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAM-AARPHSIDGRVVEPKRAV 97 (103)
T ss_dssp HHTEEEEECCTTCCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHH-TSCSEEETTEEEEEECCS
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHhhCcccceeecccccCCCccCeEEEEECCHHHHHHHH-HhCCCeECCEEEEEEECc
Confidence 3579999999999999999999999999999999999999999999999999999999999 679999999999999988
Q ss_pred CCCC
Q 020844 112 KGAG 115 (320)
Q Consensus 112 ~~~~ 115 (320)
++..
T Consensus 98 ~ke~ 101 (103)
T d1x4ba1 98 AREE 101 (103)
T ss_dssp SCCC
T ss_pred ccCC
Confidence 7643
No 28
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.86 E-value=1.1e-22 Score=140.29 Aligned_cols=76 Identities=33% Similarity=0.476 Sum_probs=72.9
Q ss_pred eeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEec
Q 020844 34 FNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 110 (320)
Q Consensus 34 ~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a 110 (320)
++|||+|||+++||++|+++|++||.|.+++|++|+.+|.+||||||+|.+.++|.+|++ +++..+.|+.|.|.+|
T Consensus 1 cklfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i~Gr~i~V~~A 76 (77)
T d1uawa_ 1 CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHELDSKTIDPKVA 76 (77)
T ss_dssp CCEEEESCCSSCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCCSSCCCEEEEC
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCCEECCeEEEEEEC
Confidence 479999999999999999999999999999999999999999999999999999999995 7999999999999876
No 29
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=4.3e-22 Score=139.81 Aligned_cols=79 Identities=32% Similarity=0.679 Sum_probs=74.6
Q ss_pred EEEcCCCccCcHHHHHHHhccCCCeeE-EEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEeccCCC
Q 020844 36 IFVGDLSPEVTDATLFACFSVYPSCSD-ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 114 (320)
Q Consensus 36 l~V~nLp~~~te~~l~~~F~~~G~i~~-v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a~~~~ 114 (320)
|||+|||+++||++|+++|+.||.|.+ ++|++++.+|+++|||||+|.+.++|.+|++.|+|..+.|++|+|.|+.++.
T Consensus 1 lfV~nLp~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a~~k~ 80 (83)
T d1x5ta1 1 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKD 80 (83)
T ss_dssp EEEECCCTTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTEECEEEESCCCC
T ss_pred CEEcCCCCcCcHHHHHHHHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEecCCC
Confidence 799999999999999999999999966 4889999899999999999999999999999999999999999999988654
No 30
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.86 E-value=5.7e-22 Score=139.84 Aligned_cols=78 Identities=23% Similarity=0.436 Sum_probs=73.3
Q ss_pred EEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCC---CccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEeccC
Q 020844 36 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTG---RSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 112 (320)
Q Consensus 36 l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g---~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a~~ 112 (320)
|||+|||+++|+++|+++|+.||.|.+++|++++.++ .++|||||+|.+.++|.+|++.|||..+.|++|+|+++.+
T Consensus 1 LfV~nLp~~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a~~ 80 (85)
T d2cpfa1 1 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISER 80 (85)
T ss_dssp EEEESCCTTCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEECEEECSSC
T ss_pred CEEcCCCCCCCHHHHHHHHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 7999999999999999999999999999999987665 5799999999999999999999999999999999999865
Q ss_pred C
Q 020844 113 G 113 (320)
Q Consensus 113 ~ 113 (320)
.
T Consensus 81 ~ 81 (85)
T d2cpfa1 81 A 81 (85)
T ss_dssp S
T ss_pred C
Confidence 4
No 31
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=3.9e-22 Score=136.93 Aligned_cols=75 Identities=32% Similarity=0.512 Sum_probs=71.3
Q ss_pred eEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEec
Q 020844 35 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 110 (320)
Q Consensus 35 ~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a 110 (320)
+|||+|||+++||++|+++|++||+|.+++|++|+.+++++|||||+|.+.++|++|++ +++..+.|+.|.|..|
T Consensus 1 klfV~nl~~~~te~~l~~~F~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l~Gr~i~V~rA 75 (75)
T d1hd0a_ 1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEHKLNGKVIDPKRA 75 (75)
T ss_dssp CEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCBTTBCCEECCC
T ss_pred CEEEeCCCCcCCHHHHHHHHHhhccccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCCEECCCEEEeeEC
Confidence 59999999999999999999999999999999999999999999999999999999995 7999999999999653
No 32
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=2.9e-22 Score=145.61 Aligned_cols=80 Identities=26% Similarity=0.352 Sum_probs=76.2
Q ss_pred CceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEecc
Q 020844 32 GHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 111 (320)
Q Consensus 32 ~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a~ 111 (320)
+.++|||+|||+++||++|+++|+.||+|.+|+|++|+.+|.++|||||+|.+.++|.+|+ .|||..+.|++|.|.++.
T Consensus 17 ~~~tifV~nL~~~~te~~l~~~F~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~-~l~g~~~~G~~l~V~~a~ 95 (101)
T d2cq4a1 17 DARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQ 95 (101)
T ss_dssp HHTEEEEESCCTTCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHH-HHTTEEETTEEEEEEEHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHcCCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHH-HHCCCEECCEEEEEEECC
Confidence 4578999999999999999999999999999999999999999999999999999999999 599999999999999875
Q ss_pred C
Q 020844 112 K 112 (320)
Q Consensus 112 ~ 112 (320)
.
T Consensus 96 ~ 96 (101)
T d2cq4a1 96 A 96 (101)
T ss_dssp H
T ss_pred C
Confidence 4
No 33
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=1.8e-21 Score=135.28 Aligned_cols=77 Identities=22% Similarity=0.377 Sum_probs=73.6
Q ss_pred ceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEec
Q 020844 33 HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 110 (320)
Q Consensus 33 ~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a 110 (320)
-++|||+|||+++||++|+++|+.||.|..+.+..++.++.++|||||+|.+.++|.+|+ .+++..|.|++|.|..|
T Consensus 2 ~r~lfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al-~~~~~~l~Gr~i~V~~A 78 (79)
T d1l3ka2 2 VKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV-IQKYHTVNGHNCEVRKA 78 (79)
T ss_dssp CSEEEEECCTTTCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHH-HCSCCEETTEECEEEEC
T ss_pred CCEEEECCCCCcCCHHHHHHHHHHhccccccccccCCCCcccccEEEEEEcCHHHHHHHH-HhCCCEECCEEEEEEEC
Confidence 368999999999999999999999999999999999999999999999999999999999 68999999999999875
No 34
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.85 E-value=2.3e-21 Score=140.57 Aligned_cols=86 Identities=23% Similarity=0.358 Sum_probs=78.9
Q ss_pred CCCCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhC------CCeeCC
Q 020844 29 DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT------GKWLGS 102 (320)
Q Consensus 29 ~~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~------~~~~~g 102 (320)
+...+++|||+|||+++||++|+++|++||.|.++.++.++.++.++|||||+|.+.++|.+|++.|+ |..+.|
T Consensus 4 ~~~~~~tlfV~nLp~~~te~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~g 83 (98)
T d1x4ha1 4 DVTEGKTVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDG 83 (98)
T ss_dssp CCCCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSS
T ss_pred CCCCCCEEEEcCCCCcCCHHHHHHHHhccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECC
Confidence 34557899999999999999999999999999999999999899999999999999999999999886 567899
Q ss_pred eeEEEEeccCCC
Q 020844 103 RQIRCNWATKGA 114 (320)
Q Consensus 103 ~~l~v~~a~~~~ 114 (320)
++|+|.++.++.
T Consensus 84 r~l~v~~a~~k~ 95 (98)
T d1x4ha1 84 RQLKVDLAVTRD 95 (98)
T ss_dssp CEEEEECCCCCC
T ss_pred EEEEEEECCCCC
Confidence 999999987754
No 35
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=2.8e-21 Score=140.92 Aligned_cols=87 Identities=23% Similarity=0.335 Sum_probs=79.4
Q ss_pred cCCCCceeEEEcCCCccCcHHHHHHHhccCCCee--------EEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCe
Q 020844 28 EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCS--------DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKW 99 (320)
Q Consensus 28 ~~~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~--------~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~ 99 (320)
+++...++|||+|||+++||++|+++|+.||.|. .+.+.+++.+|.++|||||+|.+.++|.+|++.|||..
T Consensus 3 ~~~~~~~~i~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~ 82 (101)
T d2cpea1 3 DEDSDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKD 82 (101)
T ss_dssp CCCCCCCEEEEECCCTTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCE
T ss_pred CCCCCCCEEEEECCCCcCCHHHHHHHHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCE
Confidence 3456678999999999999999999999999884 57778888899999999999999999999999999999
Q ss_pred eCCeeEEEEeccCCC
Q 020844 100 LGSRQIRCNWATKGA 114 (320)
Q Consensus 100 ~~g~~l~v~~a~~~~ 114 (320)
+.|++|+|.++.++.
T Consensus 83 ~~gr~i~V~~a~~~~ 97 (101)
T d2cpea1 83 FQGSKLKVSLARKKP 97 (101)
T ss_dssp ETTEECEEECSSCCC
T ss_pred ECCEEEEEEEcCCCC
Confidence 999999999997653
No 36
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=1.5e-21 Score=138.70 Aligned_cols=80 Identities=28% Similarity=0.521 Sum_probs=74.7
Q ss_pred ceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEeccC
Q 020844 33 HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 112 (320)
Q Consensus 33 ~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a~~ 112 (320)
..+|||+|||+++|+++|+++|+.||.|.+++|+.++ +.++|||||+|.+.++|.+|++.|||..+.|++|+|.++.+
T Consensus 8 ~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~--~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~a~~ 85 (89)
T d1cvja2 8 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 85 (89)
T ss_dssp TTEEEEESCCSSCCHHHHHHHHHTTSCEEEEEECCBT--TBCCSCEEEEESCHHHHHHHTTSSSEEEETTEEEEEEECCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEeec--CCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCC
Confidence 4579999999999999999999999999999999985 45889999999999999999999999999999999999986
Q ss_pred CC
Q 020844 113 GA 114 (320)
Q Consensus 113 ~~ 114 (320)
+.
T Consensus 86 ~~ 87 (89)
T d1cvja2 86 RK 87 (89)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 37
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=5.8e-22 Score=135.71 Aligned_cols=75 Identities=24% Similarity=0.462 Sum_probs=70.6
Q ss_pred eEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEec
Q 020844 35 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 110 (320)
Q Consensus 35 ~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a 110 (320)
+|||+|||+++||++|+++|++||+|.+++|++|+.++.++|||||+|.+.++|++|++ .++..+.|+.|.|..|
T Consensus 1 klfVgnLp~~~te~~l~~~F~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~-~~~~~i~g~~i~vk~A 75 (75)
T d1x0fa1 1 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME-KKYHNVGLSKCEIKVA 75 (75)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTT-CSSCCBTTBCCEEECC
T ss_pred CEEEcCCCCCCCHHHHHHHHHHhCCcccccccccccccccccEEEEEECCHHHHHHHHh-hCCCEECCEEeEEEEC
Confidence 59999999999999999999999999999999999999999999999999999999994 5778899999998754
No 38
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.84 E-value=1.3e-21 Score=138.17 Aligned_cols=81 Identities=22% Similarity=0.339 Sum_probs=71.3
Q ss_pred CceeEEEcCCCccCc-HHHHHHHhccCCCeeEEEEeec-CCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEe
Q 020844 32 GHFNIFVGDLSPEVT-DATLFACFSVYPSCSDARVMWD-QKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 109 (320)
Q Consensus 32 ~~~~l~V~nLp~~~t-e~~l~~~F~~~G~i~~v~i~~~-~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~ 109 (320)
..++|||+|||+++| |++|+++|++||.|.+++|+.+ +.++.++|||||+|.+.++|.+|+ +||+..+.|++|+|.+
T Consensus 3 e~~~l~V~nLp~~~t~ed~l~~~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al-~~n~~~~~gr~l~V~~ 81 (86)
T d2ghpa3 3 EGREIMIRNLSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERAL-QMNRSLLGNREISVSL 81 (86)
T ss_dssp TTTEEEEEEECTTTCCHHHHHHHHGGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHG-GGTTEEETTEEEEEEE
T ss_pred CCCEEEEECCCCCcccHHHHHHHHHhhhhccceeeecccCCccccceeeeEEECCHHHHHHHH-hcCCCEECCEEEEEEE
Confidence 467999999999986 5679999999999999998764 568999999999999999999999 5999999999999999
Q ss_pred ccCC
Q 020844 110 ATKG 113 (320)
Q Consensus 110 a~~~ 113 (320)
+.++
T Consensus 82 a~~k 85 (86)
T d2ghpa3 82 ADKK 85 (86)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 8865
No 39
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=1.5e-21 Score=142.17 Aligned_cols=84 Identities=17% Similarity=0.374 Sum_probs=76.7
Q ss_pred cCCCCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEE
Q 020844 28 EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRC 107 (320)
Q Consensus 28 ~~~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v 107 (320)
..+.+.++|||+|||+++|+++|+++|+.||.|.++.+..+. ++.++|||||+|.+.++|.+|++.|||..|.|+++.|
T Consensus 13 ~~~~~~~~lfV~nLp~~~te~~L~~~F~~~G~i~~~~~~~~~-~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~gr~~~v 91 (101)
T d1x5oa1 13 QQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDS-SGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVS 91 (101)
T ss_dssp CCCCCTTEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEEECS-SSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCCTTSC
T ss_pred cccCCCCEEEEeCCCCCCCHHHHHHHHhhcccccceeeeccc-ccccccceeEEeCCHHHHHHHHHHhCCCEECCcCCcc
Confidence 344556899999999999999999999999999999999885 8999999999999999999999999999999999988
Q ss_pred EeccC
Q 020844 108 NWATK 112 (320)
Q Consensus 108 ~~a~~ 112 (320)
.++.+
T Consensus 92 ~~~~P 96 (101)
T d1x5oa1 92 APTEP 96 (101)
T ss_dssp CCSSC
T ss_pred CCCCC
Confidence 76643
No 40
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=1.1e-20 Score=140.85 Aligned_cols=80 Identities=20% Similarity=0.318 Sum_probs=74.2
Q ss_pred CCCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEe
Q 020844 30 TSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 109 (320)
Q Consensus 30 ~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~ 109 (320)
+..+++|||+|||.++|+++|+++|+.||.|.+|++.. ++.++|||||+|.+.++|..|++.|||..|.|++|.|.+
T Consensus 4 p~~~r~l~V~nLp~~~te~~l~~~F~~~G~v~~i~~~~---~~~~kG~afV~f~~~~~A~~Ai~~l~g~~~~gr~l~V~~ 80 (114)
T d2f9da1 4 PEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGN---TPETRGTAYVVYEDIFDAKNACDHLSGFNVCNRYLVVLY 80 (114)
T ss_dssp TTCCSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEEC---STTTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEEE
T ss_pred cCCCCEEEEECCCCCCCHHHHHHHHhhcCCeEeecccc---cCCcCCeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 45678999999999999999999999999999999975 466899999999999999999999999999999999999
Q ss_pred ccC
Q 020844 110 ATK 112 (320)
Q Consensus 110 a~~ 112 (320)
+..
T Consensus 81 a~~ 83 (114)
T d2f9da1 81 YNA 83 (114)
T ss_dssp CCH
T ss_pred cCC
Confidence 764
No 41
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.83 E-value=3.4e-21 Score=132.50 Aligned_cols=75 Identities=31% Similarity=0.545 Sum_probs=72.1
Q ss_pred eEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEec
Q 020844 35 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 110 (320)
Q Consensus 35 ~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a 110 (320)
+|||+|||+++||++|+++|+.||.|..+.++.++.++.++|||||+|.+.++|.+|++ +|+..+.|++|+|.+|
T Consensus 1 rlfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~gr~i~V~~A 75 (75)
T d2msta_ 1 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEINNKMVECKKA 75 (75)
T ss_dssp CEEEECCCSSCCHHHHHHHHHTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBTTBCCEEEEC
T ss_pred CEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCEECCeEEEEEEC
Confidence 59999999999999999999999999999999999899999999999999999999995 9999999999999875
No 42
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.83 E-value=8.1e-22 Score=140.51 Aligned_cols=83 Identities=29% Similarity=0.470 Sum_probs=76.1
Q ss_pred cCCCCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEE
Q 020844 28 EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRC 107 (320)
Q Consensus 28 ~~~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v 107 (320)
..+..+++|||+|||+++|+++|+++|+.||.|.+++|+.+ .+|+++|||||+|.+.++|.+|+ +||+..+.|++|+|
T Consensus 8 ~~~~~~~~ifV~nL~~~~te~~l~~~F~~~G~i~~~~v~~~-~~g~~kg~afv~F~~~e~a~~Al-~~~g~~~~g~~i~V 85 (91)
T d1fjeb1 8 SESTTPFNLFIGNLNPNKSVAELKVAISELFAKNDLAVVDV-RTGTNRKFGYVDFESAEDLEKAL-ELTGLKVFGNEIKL 85 (91)
T ss_dssp SSCSSSEEEEEECCCTTSCHHHHHHHHHHHHHHHTCCCCEE-EEETTTTEEEEEESSHHHHHHHH-HGGGEEETTEEEEE
T ss_pred CCCCCCcEEEEeCccCcchHHHHHHHHhcCCcEEEeeeeec-CCCCccEEeEEeeCCHHHHHHHH-hcCCcEECCEEEEE
Confidence 34556789999999999999999999999999999998766 58999999999999999999999 59999999999999
Q ss_pred EeccC
Q 020844 108 NWATK 112 (320)
Q Consensus 108 ~~a~~ 112 (320)
.++..
T Consensus 86 ~~ak~ 90 (91)
T d1fjeb1 86 EKPKG 90 (91)
T ss_dssp ECCCC
T ss_pred EecCC
Confidence 99865
No 43
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=1.4e-20 Score=132.33 Aligned_cols=78 Identities=9% Similarity=0.123 Sum_probs=73.3
Q ss_pred CceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEecc
Q 020844 32 GHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 111 (320)
Q Consensus 32 ~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a~ 111 (320)
..++|||+|||.++|+++|+++|+.||.|.+|+|.+++ +|.++|||||+|.+.++|.+|+ ++++..+.|+.|.|.|..
T Consensus 5 ~~rtvfV~nlp~~~te~~l~~~F~~~G~v~~v~l~~~~-~~~~kG~afV~f~~~e~a~~al-~~~~~~~~g~~l~v~~~~ 82 (85)
T d1zh5a2 5 KNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTL-HKAFKGSIFVVFDSIESAKKFV-ETPGQKYKETDLLILFKD 82 (85)
T ss_dssp HTTEEEEECCCTTCCHHHHHHHHTTSCCEEEEEEEECT-TCCEEEEEEEEESCHHHHHHHH-TCCCCEETTEECEEEEGG
T ss_pred CcCEEEEECCCCCCCHHHHHHHHHHhcccccceeeeec-cCCcceEEEEEEcCHHHHHHHH-HHCCCEECCEEEEEEEcC
Confidence 35799999999999999999999999999999999885 8999999999999999999999 579999999999999864
No 44
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=2.8e-20 Score=136.18 Aligned_cols=86 Identities=26% Similarity=0.448 Sum_probs=75.7
Q ss_pred cCCCCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecC-CCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEE
Q 020844 28 EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQ-KTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 106 (320)
Q Consensus 28 ~~~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~-~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~ 106 (320)
..+.+.++|||+|||+++||++|+++|+.|| +.+++++.++ .++.++|||||+|.+.++|++|+ .||+..|.|+.|+
T Consensus 10 ~p~~p~~~v~V~nLp~~~te~~l~~~f~~~g-~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~-~~~~~~~~gr~l~ 87 (104)
T d1wi8a_ 10 LPKSPPYTAFLGNLPYDVTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSAL-SLNEESLGNKRIR 87 (104)
T ss_dssp CCSSSCEEEEEESCCSSCCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHH-GGGTCEETTEECE
T ss_pred CCCCCCCEEEEeCCCCcCCHHHHHHHHHHhc-cccceeeeeeccCCCcceeeeEEECCHHHHHHHH-HcCCCEECCEEEE
Confidence 3456779999999999999999999999999 7778777665 46899999999999999998777 6999999999999
Q ss_pred EEeccCCCC
Q 020844 107 CNWATKGAG 115 (320)
Q Consensus 107 v~~a~~~~~ 115 (320)
|.++.++..
T Consensus 88 V~~a~~~~~ 96 (104)
T d1wi8a_ 88 VDVADQAQD 96 (104)
T ss_dssp EEECCCCCC
T ss_pred EEECCCCCC
Confidence 999876543
No 45
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=2.1e-21 Score=141.82 Aligned_cols=86 Identities=22% Similarity=0.364 Sum_probs=80.5
Q ss_pred CCCCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEE
Q 020844 29 DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 108 (320)
Q Consensus 29 ~~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~ 108 (320)
...++++|||+|||.++|+++|+++|+.||.|..+.++.+..+|.++|||||+|.+.++|..|++.|||..+.|++|+|.
T Consensus 14 ~~~ps~tl~V~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~ 93 (102)
T d2cpxa1 14 PGEPNKVLYLKNLSPRVTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIE 93 (102)
T ss_dssp CCSCCSEEEEECCCTTCCHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCBCEEE
T ss_pred CCCCCCEEEEeCCCCCCCHHHHHHHHhhccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEECCEEEEEE
Confidence 34567899999999999999999999999999999999888899999999999999999999999999999999999999
Q ss_pred eccCCC
Q 020844 109 WATKGA 114 (320)
Q Consensus 109 ~a~~~~ 114 (320)
|+.++.
T Consensus 94 ~ak~k~ 99 (102)
T d2cpxa1 94 FGKNKK 99 (102)
T ss_dssp ECCCCS
T ss_pred eCCCcc
Confidence 998754
No 46
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=3.4e-20 Score=133.26 Aligned_cols=82 Identities=22% Similarity=0.411 Sum_probs=74.4
Q ss_pred CCCCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEE
Q 020844 29 DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 108 (320)
Q Consensus 29 ~~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~ 108 (320)
...++++|||+|||+++|+++|+++|+.||.|..+.+.++ +.++|||||+|.+.++|..|++.||+..+.|++|+|+
T Consensus 10 ~~~~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~~~~~---~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~~l~V~ 86 (95)
T d1x4aa1 10 AGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNR---RGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVE 86 (95)
T ss_dssp CCCCSSEEEEESCCTTCCHHHHHHHHGGGSCEEEEEECCS---SSSSCCEEEEESCHHHHHHHHHHHTTCEETTEECEEE
T ss_pred CCCCCCEEEEECCCCCCCHHHHHHHHhcCCceEEEEeccc---ccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEE
Confidence 3456779999999999999999999999999999887644 5678999999999999999999999999999999999
Q ss_pred eccCC
Q 020844 109 WATKG 113 (320)
Q Consensus 109 ~a~~~ 113 (320)
|+...
T Consensus 87 ~a~~~ 91 (95)
T d1x4aa1 87 FPRSG 91 (95)
T ss_dssp CCCCC
T ss_pred eccCC
Confidence 98754
No 47
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=2.1e-20 Score=134.43 Aligned_cols=77 Identities=22% Similarity=0.540 Sum_probs=71.8
Q ss_pred CceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEecc
Q 020844 32 GHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 111 (320)
Q Consensus 32 ~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a~ 111 (320)
.+++|||+|||.+++|++|+++|++||.|.+|+|+++ +|||||+|.+.++|..|++.|+|..+.|++|+|.|+.
T Consensus 17 ~~~~l~v~nL~~~~te~~L~~~F~~fG~i~~v~i~~~------kg~afV~f~~~~~A~~Ai~~l~~~~i~g~~l~v~~ak 90 (96)
T d1x4ga1 17 KNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGK 90 (96)
T ss_dssp SCCEEEEECCSSCCCHHHHHHHHHHHSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHTTCEETTEECEEECCC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHhCCceEEEEEec------ceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 4578999999999999999999999999999999876 5899999999999999999999999999999999987
Q ss_pred CCC
Q 020844 112 KGA 114 (320)
Q Consensus 112 ~~~ 114 (320)
+.+
T Consensus 91 ~~p 93 (96)
T d1x4ga1 91 ESP 93 (96)
T ss_dssp CCC
T ss_pred CCC
Confidence 643
No 48
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=2.8e-20 Score=134.09 Aligned_cols=84 Identities=20% Similarity=0.317 Sum_probs=74.7
Q ss_pred ceeEEEcCCCccCcHHHHHHHhccCCC-eeEEEEeecC-CCCCccceEEEEecCHHHHHHHHHHhCC--CeeCCeeEEEE
Q 020844 33 HFNIFVGDLSPEVTDATLFACFSVYPS-CSDARVMWDQ-KTGRSRGFGFVSFRNQQDAQSAINDLTG--KWLGSRQIRCN 108 (320)
Q Consensus 33 ~~~l~V~nLp~~~te~~l~~~F~~~G~-i~~v~i~~~~-~~g~~~G~afV~f~~~~~A~~A~~~l~~--~~~~g~~l~v~ 108 (320)
+++|||+|||.++|+++|+++|+.||+ |.+++|+++. .+++++|||||+|.+.++|..|++.|++ ..+.|++|+|.
T Consensus 1 n~rLyV~nLp~~~te~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V~ 80 (96)
T d2disa1 1 NCRLFIGGIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVD 80 (96)
T ss_dssp SEEEEEECCCTTSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEEE
T ss_pred CCEEEEcCCCCcCCHHHHHHHHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEEE
Confidence 468999999999999999999999996 8999999885 3689999999999999999999999864 45689999999
Q ss_pred eccCCCCC
Q 020844 109 WATKGAGN 116 (320)
Q Consensus 109 ~a~~~~~~ 116 (320)
|+.++...
T Consensus 81 ~A~p~~~~ 88 (96)
T d2disa1 81 WAEPEIDV 88 (96)
T ss_dssp ESCSSCST
T ss_pred EcCCCCCC
Confidence 99875543
No 49
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=8.8e-20 Score=133.37 Aligned_cols=88 Identities=20% Similarity=0.208 Sum_probs=77.9
Q ss_pred CcCCCCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEE
Q 020844 27 REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 106 (320)
Q Consensus 27 ~~~~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~ 106 (320)
.++...+..|||+|||+++||+||+++|..||.|..+.++.+..++.++|||||+|.+.++|++|+ ++|+..|.||.|.
T Consensus 9 ~~~~~~~~~v~v~nLP~~~te~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~-~~~~~~i~gR~i~ 87 (104)
T d1wg5a_ 9 SPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKAL-KKHKERIGHRYIE 87 (104)
T ss_dssp CSSCSCCCEEEEESCCTTCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHH-TTTTCCSSSSCCE
T ss_pred CCCCCCCcEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHH-hhCCCEEcceEEE
Confidence 344555668999999999999999999999999988777777779999999999999999999999 5899999999999
Q ss_pred EEeccCCCC
Q 020844 107 CNWATKGAG 115 (320)
Q Consensus 107 v~~a~~~~~ 115 (320)
|.++.+...
T Consensus 88 V~~~~~~~~ 96 (104)
T d1wg5a_ 88 IFKSSRAEV 96 (104)
T ss_dssp EEEECTTTS
T ss_pred EEECCHHHh
Confidence 999877543
No 50
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=7.2e-20 Score=131.60 Aligned_cols=75 Identities=41% Similarity=0.678 Sum_probs=72.1
Q ss_pred ceEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCCCcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEEecCCC
Q 020844 154 YTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKP 233 (320)
Q Consensus 154 ~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~~a~~~ 233 (320)
.++|||+|||.++++++|+++|++|| .|.++++.+++|||||+|.+.++|..|+..||+. .+.|+.|+|.|+++.
T Consensus 18 ~~~l~v~nL~~~~te~~L~~~F~~fG--~i~~v~i~~~kg~afV~f~~~~~A~~Ai~~l~~~---~i~g~~l~v~~ak~~ 92 (96)
T d1x4ga1 18 NCTVYCGGIASGLTDQLMRQTFSPFG--QIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT---TIEGHVVKCYWGKES 92 (96)
T ss_dssp CCEEEEECCSSCCCHHHHHHHHHHHS--CEEEEEEETTTTEEEEEESSHHHHHHHHHHHTTC---EETTEECEEECCCCC
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHhC--CceEEEEEecceEEEEEECCHHHHHHHHHHhCCC---EECCEEEEEEEcCCC
Confidence 37899999999999999999999999 9999999999999999999999999999999999 999999999998764
No 51
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=1e-20 Score=128.88 Aligned_cols=71 Identities=24% Similarity=0.493 Sum_probs=68.7
Q ss_pred EEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEE
Q 020844 36 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 106 (320)
Q Consensus 36 l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~ 106 (320)
|||+|||+++||++|+++|+.||.|..+++.+++.++.++|||||+|.+.++|.+|++.|||..+.|+.|+
T Consensus 1 lyV~nLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr~~k 71 (72)
T d1x4ea1 1 LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAK 71 (72)
T ss_dssp EEEESCCTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEESCC
T ss_pred CEEeCCCCcCCHHHHHHHHhhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECCEECc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999764
No 52
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=7.8e-20 Score=131.86 Aligned_cols=78 Identities=26% Similarity=0.462 Sum_probs=70.3
Q ss_pred cCCCCceeEEEcCCC-ccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEE
Q 020844 28 EDTSGHFNIFVGDLS-PEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 106 (320)
Q Consensus 28 ~~~~~~~~l~V~nLp-~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~ 106 (320)
+....+++|||+||| ..+++++|+++|++||.|.+++| ++|||||+|.+.++|.+|++.|||..+.|++|+
T Consensus 10 ~~~~~~~~lfV~nL~~~~~~~~~L~~~F~~~G~i~~~~i--------~rg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l~ 81 (98)
T d1wf2a_ 10 DPRSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSV--------HKGFAFVQYVNERNARAAVAGEDGRMIAGQVLD 81 (98)
T ss_dssp CCSSCCCCEEEEEECTTTCCHHHHHHSSTTSSCEEEEEE--------ETEEEEEEESSHHHHHHHHHTTTTCEETTEECE
T ss_pred CCCCCCcEEEEeCCCcccCCHHHHHHHHhhcCCEEEEEE--------eCCeEEEEECCHHHHHHHHHHcCCCEECCEEEE
Confidence 444556789999997 57889999999999999999998 368999999999999999999999999999999
Q ss_pred EEeccCC
Q 020844 107 CNWATKG 113 (320)
Q Consensus 107 v~~a~~~ 113 (320)
|.|+..+
T Consensus 82 V~~a~~~ 88 (98)
T d1wf2a_ 82 INLAAEP 88 (98)
T ss_dssp EEETTSC
T ss_pred EEECCCC
Confidence 9998754
No 53
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.81 E-value=2.3e-20 Score=132.30 Aligned_cols=76 Identities=17% Similarity=0.242 Sum_probs=69.9
Q ss_pred ceeEEEcCCCccCcHHHH---HHHhccCCCeeEEEEeecCCCCCc---cceEEEEecCHHHHHHHHHHhCCCeeCCeeEE
Q 020844 33 HFNIFVGDLSPEVTDATL---FACFSVYPSCSDARVMWDQKTGRS---RGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 106 (320)
Q Consensus 33 ~~~l~V~nLp~~~te~~l---~~~F~~~G~i~~v~i~~~~~~g~~---~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~ 106 (320)
.++|||+|||++++++|| +++|++||+|.+|.|++++.++.+ +|||||+|.+.++|.+|++.|||..+.|++|+
T Consensus 8 ~n~vyV~nLp~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr~lk 87 (89)
T d2cpia1 8 KNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTLK 87 (89)
T ss_dssp SSCEEEEEECTTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTEEEE
T ss_pred cCEEEEECCCCccCHHHHHHHHHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCEEEE
Confidence 457999999999999999 678999999999999999877655 48999999999999999999999999999999
Q ss_pred EE
Q 020844 107 CN 108 (320)
Q Consensus 107 v~ 108 (320)
|.
T Consensus 88 vS 89 (89)
T d2cpia1 88 AS 89 (89)
T ss_dssp EE
T ss_pred EC
Confidence 84
No 54
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.81 E-value=8.3e-20 Score=127.81 Aligned_cols=78 Identities=18% Similarity=0.376 Sum_probs=70.7
Q ss_pred CCCCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCee-CCeeEEE
Q 020844 29 DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL-GSRQIRC 107 (320)
Q Consensus 29 ~~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~-~g~~l~v 107 (320)
+..++++|||+|||.++|+++|+++|+.||.|.+++++++ .+|||||+|.+.++|..|++.|+|..+ .|++|+|
T Consensus 4 ~~pP~~tl~V~nLp~~~t~~~l~~~f~~~G~i~~v~~~~~-----~~g~afV~f~~~~~A~~A~~~l~g~~~~~~~~i~v 78 (83)
T d2b0ga1 4 EQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPN-----RHDIAFVEFTTELQSNAAKEALQGFKITPTHAMKI 78 (83)
T ss_dssp CCSCCSEEEEESCCTTCCHHHHHHHHTTSTTEEEEEECTT-----TCSCEEEEESSHHHHHHHHHHHTTCBSSTTCBCEE
T ss_pred CCCCCCEEEEECCCCCCCHHHHHhhhccCccEEEeeeecc-----cceeEEEecCCHHHHHHHHHHhCCcEeCCCcEEEE
Confidence 3445789999999999999999999999999999999765 368999999999999999999999988 5789999
Q ss_pred Eecc
Q 020844 108 NWAT 111 (320)
Q Consensus 108 ~~a~ 111 (320)
.|++
T Consensus 79 ~~ak 82 (83)
T d2b0ga1 79 TFAK 82 (83)
T ss_dssp EECC
T ss_pred EEec
Confidence 9986
No 55
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.81 E-value=5.4e-20 Score=132.50 Aligned_cols=82 Identities=17% Similarity=0.359 Sum_probs=74.0
Q ss_pred CCCCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEE
Q 020844 29 DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 108 (320)
Q Consensus 29 ~~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~ 108 (320)
...++++|||+|||+++||++|+++|+.||.|..++ .++.++|||||+|.+.++|.+|++.||+..+.|++|+|.
T Consensus 12 ~~~~~~~l~V~nL~~~~te~~l~~~F~~~g~v~~~~-----~~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~gr~i~V~ 86 (96)
T d1fjca_ 12 KVRAARTLLAKNLSFNITEDELKEVFEDALEIRLVS-----QDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLY 86 (96)
T ss_dssp TTTGGGEEEEESCCSSCCHHHHHHHHCSEEEECCEE-----ETTEEEEEEEEEESSHHHHHHHHHHTTEEEETTEEEEEE
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHHHHhcccceeee-----ecCccccEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEE
Confidence 345578999999999999999999999999887654 268899999999999999999999999999999999999
Q ss_pred eccCCCC
Q 020844 109 WATKGAG 115 (320)
Q Consensus 109 ~a~~~~~ 115 (320)
|+.++..
T Consensus 87 ~a~~k~~ 93 (96)
T d1fjca_ 87 YTGEKGG 93 (96)
T ss_dssp ECSSSCC
T ss_pred EeCCCCC
Confidence 9987654
No 56
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.80 E-value=5.3e-20 Score=129.85 Aligned_cols=78 Identities=22% Similarity=0.360 Sum_probs=70.7
Q ss_pred CceeEEEcCCCccCcHHHHHHHhccCCCeeE-EEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEec
Q 020844 32 GHFNIFVGDLSPEVTDATLFACFSVYPSCSD-ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 110 (320)
Q Consensus 32 ~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~-v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a 110 (320)
..++|||+|||++++|+||+++|+.||.+.. +.+..+ .++.++|||||+|.+.++|.+|++.||+..+.||+|+|.++
T Consensus 8 ~~~~l~v~nLp~~~~~~di~~~F~~~~~~~~~~~~~~~-~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v~l~ 86 (86)
T d2cqpa1 8 GPTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYN-EKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLVLG 86 (86)
T ss_dssp SSEEEEEESCCTTCCHHHHHHHTTTSCCCTTTCEEEEC-SSSCEEEEEEEEESCHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhhcccceeEEEEEeC-CCCCcceEEEEEEcCcHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 3568999999999999999999999999976 455554 68999999999999999999999999999999999999864
No 57
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=8.8e-20 Score=132.84 Aligned_cols=84 Identities=15% Similarity=0.195 Sum_probs=74.9
Q ss_pred CCCCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEE
Q 020844 29 DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 108 (320)
Q Consensus 29 ~~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~ 108 (320)
.+....+|||+|||+++||+||+++|..|| +.++.++.+. ++.++|||||+|.+.++|++|+ ++|+..|.||.|+|.
T Consensus 11 ~~~~~~~v~v~nLp~~~te~dl~~~F~~~~-~~~v~~~~~~-~g~~~G~afVeF~~~~~a~~Al-~~~~~~i~gR~I~V~ 87 (102)
T d1weza_ 11 QSTTGHCVHMRGLPYRATENDIYNFFSPLN-PMRVHIEIGP-DGRVTGEADVEFATHEDAVAAM-AKDKANMQHRYVELF 87 (102)
T ss_dssp CCSSSCEEEEESCCTTCCHHHHHHSSCSCC-CSEEEEEESS-SSCEEEEEEEECSSSHHHHHHH-TTSSCCSSSSCCEEE
T ss_pred cCCCCCEEEEeCCCCcCCHHHHHHHHhccC-cceeeeEEec-CCcceEEEEEEECCHHHHHHHH-HcCCCEECCEEEEEE
Confidence 445567999999999999999999999998 4578888885 7999999999999999999999 589999999999999
Q ss_pred eccCCCC
Q 020844 109 WATKGAG 115 (320)
Q Consensus 109 ~a~~~~~ 115 (320)
++.....
T Consensus 88 ~s~~~~~ 94 (102)
T d1weza_ 88 LNSTAGT 94 (102)
T ss_dssp EECCCCC
T ss_pred EcCCCCC
Confidence 9887543
No 58
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.80 E-value=1e-19 Score=128.01 Aligned_cols=76 Identities=28% Similarity=0.509 Sum_probs=71.0
Q ss_pred ceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEeccC
Q 020844 33 HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 112 (320)
Q Consensus 33 ~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a~~ 112 (320)
.++|||+|||.++++++|+++|+.||+|.+|++.++ +|||||+|.+.++|.+|++.|||..+.|++|+|.|+..
T Consensus 8 ~~~l~V~nLp~~~~~~~l~~~F~~~G~i~~i~~~~~------k~~afV~f~~~~~A~~A~~~l~g~~i~g~~l~V~~A~~ 81 (86)
T d2cpja1 8 RSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD------KGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACH 81 (86)
T ss_dssp TTEEEEESCCTTCCHHHHHHHTSTTCCCSEEEEETT------TTEEEEECSSSHHHHHHHHHHTTCCBTTBCCEEEESSC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHhCCceEeeeecc------cceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 457999999999999999999999999999999865 47999999999999999999999999999999999987
Q ss_pred CC
Q 020844 113 GA 114 (320)
Q Consensus 113 ~~ 114 (320)
..
T Consensus 82 ~~ 83 (86)
T d2cpja1 82 SA 83 (86)
T ss_dssp CS
T ss_pred cC
Confidence 54
No 59
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=5.6e-20 Score=131.03 Aligned_cols=80 Identities=21% Similarity=0.355 Sum_probs=72.5
Q ss_pred CceeEEEcCCCccCcHHHHHH----HhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEE
Q 020844 32 GHFNIFVGDLSPEVTDATLFA----CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRC 107 (320)
Q Consensus 32 ~~~~l~V~nLp~~~te~~l~~----~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v 107 (320)
++++|||+|||+++|++||++ +|+.||+|.+|++.+ ++.++|||||+|.+.++|.+|++.+||..+.|++|.|
T Consensus 2 P~~tl~V~nLp~~~t~~dl~~~l~~~f~~~G~i~~i~~~~---~~~~~g~afV~F~~~~~A~~A~~~~~~~~~~g~~l~v 78 (91)
T d1nu4a_ 2 PNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSR---SLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRI 78 (91)
T ss_dssp CCSEEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCH---HHHHTTCEEEEESSHHHHHHHHHHHTTCEETTEECEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhcccccccceEEee---eccCCCceEEEECCHHHHHHHHHHhCCCEECCEEEEE
Confidence 578999999999999999864 689999999998753 5778999999999999999999999999999999999
Q ss_pred EeccCCC
Q 020844 108 NWATKGA 114 (320)
Q Consensus 108 ~~a~~~~ 114 (320)
.|+..+.
T Consensus 79 ~~ak~~~ 85 (91)
T d1nu4a_ 79 QYAKTDS 85 (91)
T ss_dssp EECSSCC
T ss_pred EEeCCCc
Confidence 9997653
No 60
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=1.8e-19 Score=126.98 Aligned_cols=77 Identities=25% Similarity=0.334 Sum_probs=70.1
Q ss_pred CceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEecc
Q 020844 32 GHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 111 (320)
Q Consensus 32 ~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a~ 111 (320)
..++|||+|||+++||++|+++|+.||.|..+.+. .++|||||+|.+.++|..|+..|||..+.|+.|+|.|+.
T Consensus 7 ~~k~l~V~nLp~~~te~~l~~~F~~~g~i~~~~~~------~~rg~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~V~~ak 80 (86)
T d2cpda1 7 SVKILYVRNLMLSTSEEMIEKEFNNIKPGAVERVK------KIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAK 80 (86)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHHHTTSTTCEEEEE------ECSSEEEEEESSHHHHHHHHHHHSSEEETTEEEEEECCC
T ss_pred CCCEEEEcCCCCCCCHHHHHHhhcccceeeeEEEc------cccEEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEecc
Confidence 35789999999999999999999999999887764 356899999999999999999999999999999999987
Q ss_pred CCC
Q 020844 112 KGA 114 (320)
Q Consensus 112 ~~~ 114 (320)
++.
T Consensus 81 P~~ 83 (86)
T d2cpda1 81 PVD 83 (86)
T ss_dssp CCC
T ss_pred CCC
Confidence 654
No 61
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=2.7e-19 Score=132.08 Aligned_cols=77 Identities=25% Similarity=0.468 Sum_probs=70.8
Q ss_pred ceeEEEcCCCc-cCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEecc
Q 020844 33 HFNIFVGDLSP-EVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 111 (320)
Q Consensus 33 ~~~l~V~nLp~-~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a~ 111 (320)
+++|||+|||+ .+||++|+++|+.||.|.+|+|++++ +|||||+|.+.++|.+|++.|+|..+.|+.|+|.|+.
T Consensus 2 ~~~l~V~nL~p~~~te~~L~~~F~~fG~I~~v~i~~~~-----kg~afV~f~~~~~A~~ai~~lng~~l~g~~l~v~~s~ 76 (109)
T d2adca1 2 NSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNK-----KENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSK 76 (109)
T ss_dssp CSEEEEESCCTTTCCHHHHHHHHHHHTCEEEEEECCTT-----SCCEEEEESCHHHHHHHHHHHTTCBCSSSBCEEECCS
T ss_pred CCEEEEeCCCcccCCHHHHHHHHhhccccceEEEEecc-----cceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECC
Confidence 57999999965 59999999999999999999998874 6899999999999999999999999999999999986
Q ss_pred CCC
Q 020844 112 KGA 114 (320)
Q Consensus 112 ~~~ 114 (320)
...
T Consensus 77 ~~~ 79 (109)
T d2adca1 77 HQN 79 (109)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 62
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.80 E-value=9.3e-20 Score=135.08 Aligned_cols=79 Identities=18% Similarity=0.194 Sum_probs=71.7
Q ss_pred CCCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEe
Q 020844 30 TSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 109 (320)
Q Consensus 30 ~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~ 109 (320)
...+++|||+|||+++|+++|+++|+.||+|..|.|. .++|||||+|.+.++|.+|++.|||..|.|++|.|.|
T Consensus 7 ~r~~~~l~V~nLp~~~t~~~L~~~F~~fG~I~~v~l~------~~kg~afV~f~~~~~A~~A~~~lng~~~~gr~l~v~~ 80 (111)
T d1whxa_ 7 GRSKTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLP------EGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEW 80 (111)
T ss_dssp SEEEEEEEEESCCTTCCHHHHHHHHHTTSCEEEEECC------SSSSCEEEEESCHHHHHHHHHHHTTCBSSSSBCEEEE
T ss_pred CCCCCEEEEECCCCCCCHHHHHhhhhccCCccEEEee------ccCceEEEEEcCHHHHHHHHHHHcCCccCCCeEEEEE
Confidence 3456899999999999999999999999999999874 3568999999999999999999999999999999999
Q ss_pred ccCCC
Q 020844 110 ATKGA 114 (320)
Q Consensus 110 a~~~~ 114 (320)
+....
T Consensus 81 a~~~~ 85 (111)
T d1whxa_ 81 APIGV 85 (111)
T ss_dssp EETTT
T ss_pred CCCCc
Confidence 86643
No 63
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=1.7e-19 Score=127.73 Aligned_cols=78 Identities=15% Similarity=0.310 Sum_probs=70.3
Q ss_pred CCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCee-CCeeEEEEe
Q 020844 31 SGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL-GSRQIRCNW 109 (320)
Q Consensus 31 ~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~-~g~~l~v~~ 109 (320)
.++++|||+|||.++||++|+++|++||.|.++.+.. +.++|||||+|.+.++|.+|+..|+|..+ .|++|+|.|
T Consensus 8 pPs~tL~V~NLp~~~te~~l~~~F~~~G~v~~~~~~~----~~~~~~afV~f~~~~~A~~A~~~l~~~~i~~g~~l~v~~ 83 (88)
T d2adca2 8 PPSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFF----QKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSF 83 (88)
T ss_dssp CSCSEEEEECCCTTCCHHHHHHHHHTTSCCEEEEEEC----SSSTTCEEEEESSHHHHHHHHHHHTTCBSSSSCBCEEEE
T ss_pred CCCCEEEEECCCCCCCHHHHHHHhhccCCEEEEEEee----ecccceeEEEECCHHHHHHHHHhccCCEecCCCEEEEEe
Confidence 3578999999999999999999999999998887754 34688999999999999999999999988 589999999
Q ss_pred ccC
Q 020844 110 ATK 112 (320)
Q Consensus 110 a~~ 112 (320)
++.
T Consensus 84 sk~ 86 (88)
T d2adca2 84 SKS 86 (88)
T ss_dssp CSS
T ss_pred CCC
Confidence 865
No 64
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.79 E-value=1.7e-19 Score=123.47 Aligned_cols=74 Identities=19% Similarity=0.228 Sum_probs=68.2
Q ss_pred eeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEec
Q 020844 34 FNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 110 (320)
Q Consensus 34 ~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a 110 (320)
++|||+|||+++++++|+++|+.||.|.++++.+++. ..+|||||+|.+.++|.+|+ .+++..++|++|.|..+
T Consensus 1 Ttv~V~nlp~~~t~~~l~~~F~~~G~I~~v~~~~~~~--~~~~~afV~F~~~~~a~~Al-~~~~~~i~g~~i~V~~~ 74 (75)
T d2ghpa2 1 TTVLVKNLPKSYNQNKVYKYFKHCGPIIHVDVADSLK--KNFRFARIEFARYDGALAAI-TKTHKVVGQNEIIVSHL 74 (75)
T ss_dssp CEEEEEEECTTCCHHHHHHHHGGGSCEEEEEEEECTT--SSSEEEEEEESSHHHHHHHH-TTTTCEETTEECEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHhcCCceEEEEEEeecc--ccceEEEEEEcchHHhHHHH-HhcCcEECCEEEEEEEC
Confidence 4899999999999999999999999999999999864 34579999999999999999 68999999999999864
No 65
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=3.4e-19 Score=126.64 Aligned_cols=77 Identities=30% Similarity=0.581 Sum_probs=71.3
Q ss_pred cceEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC----CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEE
Q 020844 153 QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD----KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 228 (320)
Q Consensus 153 ~~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~----~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~ 228 (320)
..++|||+|||.++++++|+++|+.|| .|.++++.++ +|||||+|.+.++|.+|++.+|+. .+.|+.|+|.
T Consensus 7 ~~~tl~V~nLp~~~te~~l~~~F~~~G--~i~~v~i~~d~~~~~~~afV~f~~~~~A~~A~~~l~~~---~~~g~~i~v~ 81 (90)
T d2cqia1 7 QPRTLYVGNLSRDVTEVLILQLFSQIG--PCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGR---KILGKEVKVN 81 (90)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHHHHHS--CEEEEEEECCCCSSCCEEEEEESSHHHHHHHHHHHTTE---EETTEEEEEE
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHhcC--CceeeeeecccCccceeeEEEECCHHHHHHHHHHcCCC---EECCEEEEEE
Confidence 347899999999999999999999999 8999998765 789999999999999999999999 9999999999
Q ss_pred ecCCCC
Q 020844 229 WGSKPT 234 (320)
Q Consensus 229 ~a~~~~ 234 (320)
|++++.
T Consensus 82 ~a~~~~ 87 (90)
T d2cqia1 82 WATTPS 87 (90)
T ss_dssp ECCCTT
T ss_pred EcCCCC
Confidence 997654
No 66
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.79 E-value=1.6e-19 Score=126.09 Aligned_cols=73 Identities=27% Similarity=0.484 Sum_probs=68.9
Q ss_pred eEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC------CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEE
Q 020844 155 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 228 (320)
Q Consensus 155 ~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~ 228 (320)
++|||+|||.++++++|+++|++|| .|.++++.++ +|||||+|.+.++|.+|++.||+. .+.|+.|+|+
T Consensus 3 t~l~V~nLp~~~t~~~l~~~F~~~G--~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~---~~~g~~l~v~ 77 (82)
T d1b7fa1 3 TNLIVNYLPQDMTDRELYALFRAIG--PINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGI---TVRNKRLKVS 77 (82)
T ss_dssp SEEEEECCCTTCCHHHHHHHHHTTS--CEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTC---EETTEECEEE
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHhC--CcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCC---EECCEEEEEE
Confidence 6799999999999999999999999 8999998754 789999999999999999999999 9999999999
Q ss_pred ecCC
Q 020844 229 WGSK 232 (320)
Q Consensus 229 ~a~~ 232 (320)
|+++
T Consensus 78 ~a~p 81 (82)
T d1b7fa1 78 YARP 81 (82)
T ss_dssp ECCC
T ss_pred EcCC
Confidence 9865
No 67
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=2.1e-19 Score=124.38 Aligned_cols=76 Identities=24% Similarity=0.307 Sum_probs=69.3
Q ss_pred CCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEec
Q 020844 31 SGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 110 (320)
Q Consensus 31 ~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a 110 (320)
..+++|||+||+ +||++|+++|++||+|.++++.++ +|||||+|.+.++|..|++.|||..+.|++|+|.|+
T Consensus 3 ~~~~ti~V~~~~--~te~~L~~~F~~~G~I~~v~~~~~------~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a 74 (79)
T d2bz2a1 3 RKGNTLYVYGED--MTPTLLRGAFSPFGNIIDLSMDPP------RNCAFVTYEKMESADQAVAELNGTQVESVQLKVNIA 74 (79)
T ss_dssp CCCCEEEEECSS--CCHHHHHHHHSTTCCCSCEEEETT------TTEEEEECSSHHHHHHHHHHHTTCBCSSCBCEEEEC
T ss_pred CCCCEEEEECCC--CCHHHHHHHHhccCccceeeeccC------CCEEEEEEcccHHHHHHHHHhCCCEECCEEEEEEEe
Confidence 446799999996 899999999999999999999754 479999999999999999999999999999999999
Q ss_pred cCCC
Q 020844 111 TKGA 114 (320)
Q Consensus 111 ~~~~ 114 (320)
.+++
T Consensus 75 ~~~P 78 (79)
T d2bz2a1 75 RKQP 78 (79)
T ss_dssp CSSC
T ss_pred cCCC
Confidence 7653
No 68
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=9e-20 Score=126.59 Aligned_cols=75 Identities=27% Similarity=0.425 Sum_probs=68.0
Q ss_pred eEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCC-eeCCeeEEEEeccCC
Q 020844 35 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGK-WLGSRQIRCNWATKG 113 (320)
Q Consensus 35 ~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~-~~~g~~l~v~~a~~~ 113 (320)
+|||+|||.++||++|+++|++||.|.++++.+ ++|||||+|.+.++|.+|++.|||. .+.|++|+|.|+.++
T Consensus 3 ~l~V~nLp~~~te~~L~~~F~~~G~i~~~~~~~------~rg~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V~~a~~k 76 (80)
T d2cqha1 3 KLYIGNLSPAVTADDLRQLFGDRKLPLAGQVLL------KSGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVSK 76 (80)
T ss_dssp CEEEECCCTTCCHHHHHHHHHHTTCCCSSCEEE------ETTEEEECCSCHHHHHHHHHHHTTTCEETTEECEEEECCCC
T ss_pred EEEEECCCCCCCHHHHHHHHHHhCcEEEeEEec------ccceEEEEECCHHHHHHHHHHhCCCeEECCEEEEEEEcCCc
Confidence 699999999999999999999999998777664 4689999999999999999999996 699999999999875
Q ss_pred CC
Q 020844 114 AG 115 (320)
Q Consensus 114 ~~ 115 (320)
..
T Consensus 77 ~~ 78 (80)
T d2cqha1 77 KL 78 (80)
T ss_dssp CC
T ss_pred Cc
Confidence 43
No 69
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=1.2e-19 Score=128.44 Aligned_cols=78 Identities=27% Similarity=0.337 Sum_probs=69.6
Q ss_pred CCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEec
Q 020844 31 SGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 110 (320)
Q Consensus 31 ~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a 110 (320)
..+++|||+|||+++||++|+++|++||.|.+|++. ..++|||||+|.+.++|++|+. ++..+.|++|.|.++
T Consensus 3 ~~s~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~~~-----~~~~gfafV~f~~~~~a~~a~~--~~~~i~g~~l~v~~a 75 (88)
T d1wf0a_ 3 SGSSGVFVGRCTGDMTEDELREFFSQYGDVMDVFIP-----KPFRAFAFVTFADDQIAQSLCG--EDLIIKGISVHISNA 75 (88)
T ss_dssp SCCCEEEEESCCSSSCHHHHHHHSTTTSCCCEEECC-----SSCCSCCEEECSCHHHHHHTTT--CEEEETTEEEEEECC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHcCCceEEEEe-----eccCceEEEEECCHHHHHHHHh--CCCEECCEEeEEEeC
Confidence 457899999999999999999999999999998764 3467999999999999999994 788999999999998
Q ss_pred cCCCC
Q 020844 111 TKGAG 115 (320)
Q Consensus 111 ~~~~~ 115 (320)
.++..
T Consensus 76 ~~k~~ 80 (88)
T d1wf0a_ 76 EPKHN 80 (88)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 76543
No 70
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.79 E-value=3.9e-19 Score=124.32 Aligned_cols=78 Identities=21% Similarity=0.332 Sum_probs=70.9
Q ss_pred CCCcceEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC-CcEEEEEeCCHHHHHHHHHHcCCCCcccc-cCeEeEE
Q 020844 150 NNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD-KGFGFVRYSTHAEAALAIQMGNTTQSSYL-FGKQMKC 227 (320)
Q Consensus 150 ~~~~~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~-~g~afV~f~~~~~A~~A~~~l~~~~~~~~-~g~~l~v 227 (320)
.++++++|||+|||.++++++|+++|++|| .|.++++.++ +|+|||+|.+.++|..|+..|||. .+ +|+.|+|
T Consensus 4 ~~pP~~tl~V~nLp~~~t~~~l~~~f~~~G--~i~~v~~~~~~~g~afV~f~~~~~A~~A~~~l~g~---~~~~~~~i~v 78 (83)
T d2b0ga1 4 EQPPNQILFLTNLPEETNEMMLSMLFNQFP--GFKEVRLVPNRHDIAFVEFTTELQSNAAKEALQGF---KITPTHAMKI 78 (83)
T ss_dssp CCSCCSEEEEESCCTTCCHHHHHHHHTTST--TEEEEEECTTTCSCEEEEESSHHHHHHHHHHHTTC---BSSTTCBCEE
T ss_pred CCCCCCEEEEECCCCCCCHHHHHhhhccCc--cEEEeeeecccceeEEEecCCHHHHHHHHHHhCCc---EeCCCcEEEE
Confidence 345568999999999999999999999999 9999999876 689999999999999999999999 77 4689999
Q ss_pred EecCC
Q 020844 228 SWGSK 232 (320)
Q Consensus 228 ~~a~~ 232 (320)
+|++.
T Consensus 79 ~~akk 83 (83)
T d2b0ga1 79 TFAKK 83 (83)
T ss_dssp EECCC
T ss_pred EEecC
Confidence 99863
No 71
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=2.7e-19 Score=131.62 Aligned_cols=81 Identities=19% Similarity=0.199 Sum_probs=73.6
Q ss_pred CCCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCee--CCeeEEE
Q 020844 30 TSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL--GSRQIRC 107 (320)
Q Consensus 30 ~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~--~g~~l~v 107 (320)
+++..+|||+|||+++||++|+++|++||.|.++.|++++ ++|||||+|.+.++|++|++.|||..+ .++.|+|
T Consensus 4 ~s~~~~v~V~NL~~~vte~~L~~~F~~~G~i~~~~i~~~~----~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~v 79 (108)
T d2adba1 4 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKN----NQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRI 79 (108)
T ss_dssp CCCEEEEESCSCCSTTHHHHHHHHHTTTSCEEEEEEEEET----TEEEEEEEESCHHHHHHHHHHHHSCCSSTTCCCCEE
T ss_pred CCCeEEEEEeCcCCCCCHHHHHHHHccCCcEEEEEEEeeC----CCCeEEEEECCHHHHHHHHHHHCCCEeccCCcEEEE
Confidence 4567899999999999999999999999999999999874 589999999999999999999999988 5789999
Q ss_pred EeccCCC
Q 020844 108 NWATKGA 114 (320)
Q Consensus 108 ~~a~~~~ 114 (320)
.|+....
T Consensus 80 ~~s~~~~ 86 (108)
T d2adba1 80 DFSKLTS 86 (108)
T ss_dssp EECSSCS
T ss_pred EecCCcc
Confidence 9987654
No 72
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=1.6e-19 Score=131.87 Aligned_cols=82 Identities=20% Similarity=0.261 Sum_probs=73.0
Q ss_pred CCCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEe
Q 020844 30 TSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 109 (320)
Q Consensus 30 ~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~ 109 (320)
+...++|||+|||+++|+++|+++|..||.|..+.++.+..+|.++|||||+|.+.++|.+|+ .+|+..|.|+.|.|.+
T Consensus 5 ~~~~~~v~v~nLp~~~t~~~l~~~F~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al-~~n~~~i~gr~i~V~~ 83 (103)
T d2cpya1 5 NSAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSE-RLHRKKLNGREAFVHV 83 (103)
T ss_dssp CSCCCEEEEESCCTTSCHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHG-GGCSEEETTEEEEEEE
T ss_pred CCCceEEEEeCCCCCCCHHHHhhhhcccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHH-hcCCCeECCcEEEEEE
Confidence 445678999999999999999999999999987555555568999999999999999999999 5999999999999998
Q ss_pred ccC
Q 020844 110 ATK 112 (320)
Q Consensus 110 a~~ 112 (320)
+..
T Consensus 84 ~~~ 86 (103)
T d2cpya1 84 VTL 86 (103)
T ss_dssp ECH
T ss_pred CCH
Confidence 754
No 73
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.78 E-value=2.3e-19 Score=126.25 Aligned_cols=75 Identities=32% Similarity=0.599 Sum_probs=71.9
Q ss_pred eEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCCCcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEEecCCCC
Q 020844 155 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 234 (320)
Q Consensus 155 ~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~~a~~~~ 234 (320)
++|||+|||.++++++|+++|++|| .|.++++.++++||||+|.+.++|.+|++.||+. .+.|+.|+|+||..+.
T Consensus 9 ~~l~V~nLp~~~~~~~l~~~F~~~G--~i~~i~~~~~k~~afV~f~~~~~A~~A~~~l~g~---~i~g~~l~V~~A~~~~ 83 (86)
T d2cpja1 9 SRLFVGNLPPDITEEEMRKLFEKYG--KAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNM---PLRGKQLRVRFACHSA 83 (86)
T ss_dssp TEEEEESCCTTCCHHHHHHHTSTTC--CCSEEEEETTTTEEEEECSSSHHHHHHHHHHTTC---CBTTBCCEEEESSCCS
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhC--CceEeeeecccceEEEEECCHHHHHHHHHHhCCC---EECCEEEEEEECCCcC
Confidence 6799999999999999999999999 9999999999999999999999999999999999 9999999999987653
No 74
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.78 E-value=3.4e-19 Score=126.02 Aligned_cols=76 Identities=22% Similarity=0.442 Sum_probs=70.2
Q ss_pred cceEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC------CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeE
Q 020844 153 QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMK 226 (320)
Q Consensus 153 ~~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~ 226 (320)
..++|||+|||.++++++|+++|++|| .|.++++.++ +|||||+|.+.++|.+|+..||+. .+.|+.|+
T Consensus 6 ~~~~l~V~nL~~~~t~~~l~~~F~~~G--~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~---~l~g~~l~ 80 (88)
T d1rk8a_ 6 EGWILFVTSIHEEAQEDEIQEKFCDYG--EIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGA---EIMGQTIQ 80 (88)
T ss_dssp -CEEEEEESCCTTCCHHHHHHHHGGGS--CEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTC---EETTEECE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHcC--CcccccccccccccccccceeEEECCHHHHHHHHHHcCCC---EECCEEEE
Confidence 347999999999999999999999999 8999998754 689999999999999999999999 99999999
Q ss_pred EEecCCC
Q 020844 227 CSWGSKP 233 (320)
Q Consensus 227 v~~a~~~ 233 (320)
|+|+.++
T Consensus 81 V~~a~~k 87 (88)
T d1rk8a_ 81 VDWCFVK 87 (88)
T ss_dssp EEESEEC
T ss_pred EEEecCC
Confidence 9998764
No 75
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=3.7e-19 Score=124.30 Aligned_cols=73 Identities=34% Similarity=0.483 Sum_probs=68.7
Q ss_pred eEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC------CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEE
Q 020844 155 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 228 (320)
Q Consensus 155 ~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~ 228 (320)
++|||+|||.++++++|+++|++|| .|.++++.++ +|||||+|.+.++|..|++.||+. .+.|+.|+|.
T Consensus 3 t~l~V~nLp~~~te~~l~~~f~~~G--~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~---~~~g~~l~v~ 77 (82)
T d1fxla1 3 TNLIVNYLPQNMTQEEFRSLFGSIG--EIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGL---RLQTKTIKVS 77 (82)
T ss_dssp SEEEEESCCTTCCHHHHHHHHHTTS--CEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTC---EETTEECEEE
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhC--CcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCC---EECCEEEEEE
Confidence 5799999999999999999999999 9999998754 689999999999999999999999 9999999999
Q ss_pred ecCC
Q 020844 229 WGSK 232 (320)
Q Consensus 229 ~a~~ 232 (320)
|+++
T Consensus 78 ~AkP 81 (82)
T d1fxla1 78 YARP 81 (82)
T ss_dssp ECCC
T ss_pred EeeC
Confidence 9864
No 76
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=1.1e-18 Score=124.67 Aligned_cols=76 Identities=25% Similarity=0.371 Sum_probs=71.2
Q ss_pred ceEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC----CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEEe
Q 020844 154 YTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD----KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSW 229 (320)
Q Consensus 154 ~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~----~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~~ 229 (320)
.++|||+|||+++++++|+++|++|| .|.++++.++ +|||||+|.+.++|.+|+..||+. .++|+.|+|+|
T Consensus 11 ~~~l~v~nLp~~~t~~~L~~~F~~~G--~v~~v~~~~~~~~~kg~afV~f~~~~~a~~Ai~~l~~~---~~~g~~l~V~~ 85 (93)
T d2cq3a1 11 PKRLHVSNIPFRFRDPDLRQMFGQFG--KILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGT---VVEGRKIEVNN 85 (93)
T ss_dssp CCEEEEESCCTTCCHHHHHHHGGGTS--CEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHHHTTC---EETTEECEEEE
T ss_pred CCEEEEECCCCCCCHHHHHHHHhhcc--eeeeccccccccCCcceeEEEECCHHHHHHHHHHcCCC---EECCEEEEEEe
Confidence 47899999999999999999999999 9999998866 789999999999999999999999 99999999999
Q ss_pred cCCCC
Q 020844 230 GSKPT 234 (320)
Q Consensus 230 a~~~~ 234 (320)
++++.
T Consensus 86 A~~r~ 90 (93)
T d2cq3a1 86 ATARV 90 (93)
T ss_dssp CCSSC
T ss_pred cCcCC
Confidence 97753
No 77
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=2.1e-19 Score=127.01 Aligned_cols=76 Identities=20% Similarity=0.253 Sum_probs=66.9
Q ss_pred CCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEec
Q 020844 31 SGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 110 (320)
Q Consensus 31 ~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a 110 (320)
+.+++|||+|||+++|++||+++|++|| +..+.+ +.++|||||+|.+.++|++|++.||+..+.|++|+|+++
T Consensus 3 s~s~~i~V~nLp~~~t~~~l~~lF~~~G-~~~~~~------~~~kg~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~V~~a 75 (88)
T d1wg1a_ 3 SGSSGILVKNLPQDSNCQEVHDLLKDYD-LKYCYV------DRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQ 75 (88)
T ss_dssp CCCCCEEEESCCSSCCHHHHHHHTCSSC-CCCEEE------EGGGTEEEECCSCHHHHHHHHHHHTTEEETTEEEEEEEC
T ss_pred CCCCEEEEeCCCCccChHHHHHHHHhcC-ceeeee------eccCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 3567999999999999999999999999 333333 456799999999999999999999999999999999998
Q ss_pred cCC
Q 020844 111 TKG 113 (320)
Q Consensus 111 ~~~ 113 (320)
..+
T Consensus 76 ~~~ 78 (88)
T d1wg1a_ 76 PTD 78 (88)
T ss_dssp CCC
T ss_pred CCC
Confidence 654
No 78
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.78 E-value=1.6e-18 Score=125.41 Aligned_cols=77 Identities=22% Similarity=0.311 Sum_probs=71.4
Q ss_pred ceEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC------CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEE
Q 020844 154 YTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKC 227 (320)
Q Consensus 154 ~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v 227 (320)
.++|||+|||+++++++|+++|++|| .|.++++.++ +|||||+|.+.++|.+|++.||+. .+.|+.|+|
T Consensus 8 ~~~lfV~nL~~~~t~~~l~~~F~~~g--~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~---~~~gr~i~V 82 (99)
T d1whwa_ 8 SGRLFVRNLSYTSSEEDLEKLFSAYG--PLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQ---VFQGRMLHV 82 (99)
T ss_dssp CEEEEEECCCTTCCHHHHHHHHHTTS--CEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTE---ESSSCEEEE
T ss_pred CCEEEEECCCCcCCHHHHHHHHHhcC--CceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCC---EECCEEEEE
Confidence 47899999999999999999999999 9999999765 789999999999999999999999 999999999
Q ss_pred EecCCCCC
Q 020844 228 SWGSKPTP 235 (320)
Q Consensus 228 ~~a~~~~~ 235 (320)
.+++.+..
T Consensus 83 ~~a~~~~~ 90 (99)
T d1whwa_ 83 LPSTIKKE 90 (99)
T ss_dssp EECCCCST
T ss_pred EECCCCCc
Confidence 99987543
No 79
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=1.1e-18 Score=123.35 Aligned_cols=82 Identities=13% Similarity=0.201 Sum_probs=73.4
Q ss_pred CcCCCCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHh--CCCeeCCee
Q 020844 27 REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL--TGKWLGSRQ 104 (320)
Q Consensus 27 ~~~~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l--~~~~~~g~~ 104 (320)
+.+..++++|||+|||.++|+++|+++|++||.|.++++.++ +|||||+|.+.++|.+|++.+ ++..+.|++
T Consensus 2 ~~~~~Ps~~l~V~nLp~~~t~~~L~~~f~~~G~i~~v~~~~~------~~~afV~f~~~e~A~~a~~~~~~~~~~~~g~~ 75 (88)
T d2cq1a1 2 KMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKG------KNQAFLELATEEAAITMVNYYSAVTPHLRNQP 75 (88)
T ss_dssp CCCSSCCSEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHHHSCCEETTEE
T ss_pred CCCCCCCCEEEEeCCCCCCCHHHHHHHHhccccccccccccc------ceEEEEEeCCHHHHHHHHHHHccCCCccCCCE
Confidence 456778999999999999999999999999999999998865 369999999999999999865 678999999
Q ss_pred EEEEeccCCC
Q 020844 105 IRCNWATKGA 114 (320)
Q Consensus 105 l~v~~a~~~~ 114 (320)
|+|.|+..+.
T Consensus 76 l~v~~sk~~~ 85 (88)
T d2cq1a1 76 IYIQYSNHKE 85 (88)
T ss_dssp CEEEECSCSS
T ss_pred EEEEECCCCC
Confidence 9999997653
No 80
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=8.6e-19 Score=125.21 Aligned_cols=75 Identities=29% Similarity=0.537 Sum_probs=70.5
Q ss_pred eEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC------CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEE
Q 020844 155 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 228 (320)
Q Consensus 155 ~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~ 228 (320)
++|||+|||.++|+++|+++|++|| .|.++++.++ +|||||+|.+.++|.+|++.||+. .+.|+.|+|+
T Consensus 10 ~tlfV~nLp~~~t~~~l~~~F~~~G--~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~---~~~g~~l~V~ 84 (93)
T d1x5ua1 10 ATVYVGGLDEKVSEPLLWELFLQAG--PVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMI---KLYGKPIRVN 84 (93)
T ss_dssp TEEEEECCCTTCCHHHHHHHHHTTS--CEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSC---BCSSCBCEEE
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHhC--CccccceeecccccccccceEEEECCHHHHHHHHHHcCCC---EECCEEEEEE
Confidence 6899999999999999999999999 9999998754 689999999999999999999999 9999999999
Q ss_pred ecCCCC
Q 020844 229 WGSKPT 234 (320)
Q Consensus 229 ~a~~~~ 234 (320)
||+++.
T Consensus 85 ~A~~~~ 90 (93)
T d1x5ua1 85 KASAHN 90 (93)
T ss_dssp ETTTTS
T ss_pred EcCCCC
Confidence 997654
No 81
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=3.3e-19 Score=126.43 Aligned_cols=76 Identities=33% Similarity=0.557 Sum_probs=70.6
Q ss_pred ceEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC------CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEE
Q 020844 154 YTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKC 227 (320)
Q Consensus 154 ~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v 227 (320)
.++|||+|||+++++++|+++|++|| .|.++++.++ +|||||+|.+.++|.+|++.||+. .++|+.|+|
T Consensus 5 ~~tlfV~nLp~~~te~~l~~~F~~~G--~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~---~i~g~~l~v 79 (89)
T d2cqba1 5 KRVLYVGGLAEEVDDKVLHAAFIPFG--DITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNES---ELFGRTIRV 79 (89)
T ss_dssp CSCEEEESCCSSCCHHHHHHHHTTTS--CCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTE---EETTEEEEE
T ss_pred CcEEEEeCCCCcCCHHHHHHHHhhCC--eEEecccccccccccccceeEEEECCHHHHHHHHHHcCCC---EECCEEEEE
Confidence 37899999999999999999999999 8999998754 789999999999999999999999 999999999
Q ss_pred EecCCCC
Q 020844 228 SWGSKPT 234 (320)
Q Consensus 228 ~~a~~~~ 234 (320)
+|++++.
T Consensus 80 ~~a~p~~ 86 (89)
T d2cqba1 80 NLAKPMR 86 (89)
T ss_dssp EECCCCC
T ss_pred EEeCCCC
Confidence 9997654
No 82
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=7.5e-19 Score=127.77 Aligned_cols=79 Identities=28% Similarity=0.363 Sum_probs=70.9
Q ss_pred CcceEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC------CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEe
Q 020844 152 PQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQM 225 (320)
Q Consensus 152 ~~~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l 225 (320)
++.++|||+|||+++++++|+++|++|| .|.++.+..+ +|||||+|.+.++|..|++.||+. .+.|+.|
T Consensus 16 p~~~~l~V~nLp~~~te~~l~~~F~~~G--~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~---~~~g~~i 90 (102)
T d2cpza1 16 PEGANLFIYHLPQEFGDQDLLQMFMPFG--NVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGF---QIGMKRL 90 (102)
T ss_dssp STTCCEEEESCCSSCCHHHHHHHHGGGS--CCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTC---EETTEEC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhc--cccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCC---EECCEEE
Confidence 3446799999999999999999999999 7888877643 689999999999999999999999 9999999
Q ss_pred EEEecCCCCC
Q 020844 226 KCSWGSKPTP 235 (320)
Q Consensus 226 ~v~~a~~~~~ 235 (320)
+|+|++++..
T Consensus 91 ~V~~a~~k~~ 100 (102)
T d2cpza1 91 KVQLKRSKND 100 (102)
T ss_dssp EEECCCCSCC
T ss_pred EEEEeCCCCC
Confidence 9999987654
No 83
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=1e-18 Score=124.83 Aligned_cols=75 Identities=31% Similarity=0.426 Sum_probs=69.9
Q ss_pred ceEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC------CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEE
Q 020844 154 YTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKC 227 (320)
Q Consensus 154 ~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v 227 (320)
+++|||+|||.++|+++|+++|++|| .|.++.+.++ +|||||+|.+.++|..|++.||+. .++|+.|+|
T Consensus 7 s~tlfV~nlp~~~te~~l~~~F~~~G--~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~---~~~gr~i~V 81 (93)
T d1h2vz_ 7 SCTLYVGNLSFYTTEEQIYELFSKSG--DIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGT---RLDDRIIRT 81 (93)
T ss_dssp CCEEEEESCCTTCCHHHHHHHHGGGS--CEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTS---EETTEECEE
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHC--CcceeccccccccccccceEEEEECCHHHHHHHHHHhCCC---EECCEEEEE
Confidence 47999999999999999999999999 9999999764 679999999999999999999999 999999999
Q ss_pred EecCCC
Q 020844 228 SWGSKP 233 (320)
Q Consensus 228 ~~a~~~ 233 (320)
+|+...
T Consensus 82 ~~a~~~ 87 (93)
T d1h2vz_ 82 DWDAGF 87 (93)
T ss_dssp EEESCC
T ss_pred EEcCCC
Confidence 998654
No 84
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.77 E-value=6.7e-19 Score=130.38 Aligned_cols=77 Identities=14% Similarity=0.182 Sum_probs=72.7
Q ss_pred cceEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCCCcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEEecCC
Q 020844 153 QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 232 (320)
Q Consensus 153 ~~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~~a~~ 232 (320)
..++|||+|||.++++++|+++|++|| .|..|.+.+.+|||||+|.+.++|.+|++.||+. .|.|++|.|.|+..
T Consensus 9 ~~~~l~V~nLp~~~t~~~L~~~F~~fG--~I~~v~l~~~kg~afV~f~~~~~A~~A~~~lng~---~~~gr~l~v~~a~~ 83 (111)
T d1whxa_ 9 SKTVILAKNLPAGTLAAEIQETFSRFG--SLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYS---KFHHVPLYLEWAPI 83 (111)
T ss_dssp EEEEEEEESCCTTCCHHHHHHHHHTTS--CEEEEECCSSSSCEEEEESCHHHHHHHHHHHTTC---BSSSSBCEEEEEET
T ss_pred CCCEEEEECCCCCCCHHHHHhhhhccC--CccEEEeeccCceEEEEEcCHHHHHHHHHHHcCC---ccCCCeEEEEECCC
Confidence 447999999999999999999999999 9999999999999999999999999999999999 99999999999865
Q ss_pred CC
Q 020844 233 PT 234 (320)
Q Consensus 233 ~~ 234 (320)
..
T Consensus 84 ~~ 85 (111)
T d1whxa_ 84 GV 85 (111)
T ss_dssp TT
T ss_pred Cc
Confidence 43
No 85
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=9.6e-19 Score=123.22 Aligned_cols=76 Identities=20% Similarity=0.309 Sum_probs=70.2
Q ss_pred ceEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCCCcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEEecCCC
Q 020844 154 YTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKP 233 (320)
Q Consensus 154 ~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~~a~~~ 233 (320)
.++|||+|||.++++++|+++|++|| .+..+.+.+++|||||+|.+.++|..|+..||+. .+.|+.|+|+|++++
T Consensus 8 ~k~l~V~nLp~~~te~~l~~~F~~~g--~i~~~~~~~~rg~afV~f~~~~~A~~Ai~~l~~~---~i~g~~i~V~~akP~ 82 (86)
T d2cpda1 8 VKILYVRNLMLSTSEEMIEKEFNNIK--PGAVERVKKIRDYAFVHFSNREDAVEAMKALNGK---VLDGSPIEVTLAKPV 82 (86)
T ss_dssp CCEEEEESCCTTCCHHHHHHHHHTTS--TTCEEEEEECSSEEEEEESSHHHHHHHHHHHSSE---EETTEEEEEECCCCC
T ss_pred CCEEEEcCCCCCCCHHHHHHhhcccc--eeeeEEEccccEEEEEEeCCHHHHHHHHHHcCCC---EECCEEEEEEeccCC
Confidence 37899999999999999999999999 6677777888999999999999999999999999 999999999999754
Q ss_pred C
Q 020844 234 T 234 (320)
Q Consensus 234 ~ 234 (320)
.
T Consensus 83 ~ 83 (86)
T d2cpda1 83 D 83 (86)
T ss_dssp C
T ss_pred C
Confidence 3
No 86
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=1.2e-19 Score=128.17 Aligned_cols=72 Identities=21% Similarity=0.219 Sum_probs=67.0
Q ss_pred eEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEeccCC
Q 020844 35 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 113 (320)
Q Consensus 35 ~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a~~~ 113 (320)
+|||+|||+++|+++|+++|+.||.|.++++.++ |||||+|.+.++|++|++.|||..+.|+.|+|.++...
T Consensus 2 rvfV~nlp~~~~~~~l~~~F~~~G~v~~~~i~~~-------g~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~~~~~ 73 (87)
T d3begb1 2 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD-------GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 73 (87)
T ss_dssp CEEEEECCSSCCTTHHHHHHGGGSCEEEEEECTT-------SEEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCBCEEE
T ss_pred eEEEECCCCcCCHHHHHHHHhhhccccccccccc-------ceeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeEEecC
Confidence 6999999999999999999999999999998654 79999999999999999999999999999999887543
No 87
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=1.9e-18 Score=123.99 Aligned_cols=77 Identities=21% Similarity=0.397 Sum_probs=70.7
Q ss_pred cceEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC---CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEEe
Q 020844 153 QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD---KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSW 229 (320)
Q Consensus 153 ~~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~---~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~~ 229 (320)
+.++|||+|||+++++++|+++|+.|| .|..+.+.++ ++||||+|.+.++|..|++.||+. .+.|+.|+|+|
T Consensus 13 ~~~~l~V~nLp~~~t~~~l~~~F~~~G--~v~~~~~~~~~~~~g~afV~f~~~e~a~~Ai~~l~g~---~~~g~~l~V~~ 87 (95)
T d1x4aa1 13 NDCRIYVGNLPPDIRTKDIEDVFYKYG--AIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY---DYDGYRLRVEF 87 (95)
T ss_dssp CSSEEEEESCCTTCCHHHHHHHHGGGS--CEEEEEECCSSSSSCCEEEEESCHHHHHHHHHHHTTC---EETTEECEEEC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhcCC--ceEEEEecccccccceEEEEECCHHHHHHHHHHhCCC---EECCEEEEEEe
Confidence 347899999999999999999999999 8888888654 789999999999999999999999 99999999999
Q ss_pred cCCCC
Q 020844 230 GSKPT 234 (320)
Q Consensus 230 a~~~~ 234 (320)
++...
T Consensus 88 a~~~r 92 (95)
T d1x4aa1 88 PRSGR 92 (95)
T ss_dssp CCCCC
T ss_pred ccCCC
Confidence 87643
No 88
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.77 E-value=9.1e-19 Score=126.17 Aligned_cols=79 Identities=18% Similarity=0.219 Sum_probs=71.7
Q ss_pred CCCCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEE
Q 020844 29 DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 108 (320)
Q Consensus 29 ~~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~ 108 (320)
.....++|||+|||++++++||+++|+.||+|.+++|.+ +|||||+|.+.++|.+|++.||+..+.|+.|+|.
T Consensus 11 ~~~~~~~i~V~Nlp~~~~~~~L~~~F~~~G~v~~~~i~~-------~g~afV~f~~~~~a~~Ai~~lng~~~~g~~i~v~ 83 (98)
T d1wg4a_ 11 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQK-------DGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETS 83 (98)
T ss_dssp CCSCSCEEEEECCCSSCCHHHHHHHHTTSSCEEEEEEET-------TTEEEEEESSHHHHHHHHHHHSSEEEECTTSCEE
T ss_pred CCCCCCEEEEECCCCCCCHHHHHHHHHhhcccccccccc-------cceEEEEECCHHHHHHHHHHhCCCEeCCeEEEEE
Confidence 344577899999999999999999999999999999864 3799999999999999999999999999999999
Q ss_pred eccCCC
Q 020844 109 WATKGA 114 (320)
Q Consensus 109 ~a~~~~ 114 (320)
+.....
T Consensus 84 ~~~~~~ 89 (98)
T d1wg4a_ 84 YIRVYP 89 (98)
T ss_dssp EEEEEC
T ss_pred EEecCC
Confidence 986543
No 89
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.76 E-value=1.3e-18 Score=125.40 Aligned_cols=79 Identities=24% Similarity=0.426 Sum_probs=71.4
Q ss_pred CCCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCC--eeEEE
Q 020844 30 TSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGS--RQIRC 107 (320)
Q Consensus 30 ~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g--~~l~v 107 (320)
..++++|||+|||+++|+++|+++|++||.|..+++.++ ++||||+|.+.++|.+|++.||+..+.| ++|+|
T Consensus 14 ~~Ps~tl~V~nLp~~~t~~~l~~~f~~~G~i~~~~~~~~------~~~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l~v 87 (97)
T d1whya_ 14 ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKG------DSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRV 87 (97)
T ss_dssp CCCCSCEEEECCCSSCCHHHHHHHHHTTSCEEEEEECSS------SCCEEEEESSHHHHHHHHHHHTTCBCSSSSCBCEE
T ss_pred CCCCCEEEEcCCCCCCCHHHHHHHHHhhcccceEeeecc------ccEEEeccCCHHHHHHHHHHhCCCEeCCCceEEEE
Confidence 345789999999999999999999999999999999765 4699999999999999999999999976 58999
Q ss_pred EeccCCC
Q 020844 108 NWATKGA 114 (320)
Q Consensus 108 ~~a~~~~ 114 (320)
.|+++.+
T Consensus 88 ~~ak~~~ 94 (97)
T d1whya_ 88 DFAKSGP 94 (97)
T ss_dssp EECCCCC
T ss_pred EeCCCCC
Confidence 9987654
No 90
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=7.3e-19 Score=121.65 Aligned_cols=72 Identities=25% Similarity=0.286 Sum_probs=68.9
Q ss_pred eEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCCCcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEEecCCC
Q 020844 155 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKP 233 (320)
Q Consensus 155 ~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~~a~~~ 233 (320)
++|||+|++ +|+++|+++|++|| .|.++++.+++++|||+|.+.++|..|++.||+. .+.|+.|+|+|++++
T Consensus 6 ~ti~V~~~~--~te~~L~~~F~~~G--~I~~v~~~~~~~~afV~f~~~~~A~~Ai~~lng~---~~~g~~l~V~~a~~~ 77 (79)
T d2bz2a1 6 NTLYVYGED--MTPTLLRGAFSPFG--NIIDLSMDPPRNCAFVTYEKMESADQAVAELNGT---QVESVQLKVNIARKQ 77 (79)
T ss_dssp CEEEEECSS--CCHHHHHHHHSTTC--CCSCEEEETTTTEEEEECSSHHHHHHHHHHHTTC---BCSSCBCEEEECCSS
T ss_pred CEEEEECCC--CCHHHHHHHHhccC--ccceeeeccCCCEEEEEEcccHHHHHHHHHhCCC---EECCEEEEEEEecCC
Confidence 789999986 89999999999999 9999999999999999999999999999999999 999999999999754
No 91
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.76 E-value=1.7e-18 Score=123.94 Aligned_cols=75 Identities=25% Similarity=0.568 Sum_probs=69.6
Q ss_pred eEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC-------CcEEEEEeCCHHHHHHHHHHc-CCCCcccccCeEeE
Q 020844 155 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD-------KGFGFVRYSTHAEAALAIQMG-NTTQSSYLFGKQMK 226 (320)
Q Consensus 155 ~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~-------~g~afV~f~~~~~A~~A~~~l-~~~~~~~~~g~~l~ 226 (320)
++|||+|||.++++++|+++|++|| .|.++++.++ +|||||+|.+.++|.+|++.| |+. .+.|++|+
T Consensus 9 ~~l~V~nLp~~~~e~~l~~~F~~~G--~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~---~~~Gr~l~ 83 (94)
T d2cpha1 9 SKILVRNIPFQANQREIRELFSTFG--ELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHST---HLYGRRLV 83 (94)
T ss_dssp CCEEEESCCTTCCHHHHHHHHHTTS--CEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCC---BSSSCBCE
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHhC--CceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCc---EECCEEEE
Confidence 6799999999999999999999999 9999998643 789999999999999999998 899 89999999
Q ss_pred EEecCCCC
Q 020844 227 CSWGSKPT 234 (320)
Q Consensus 227 v~~a~~~~ 234 (320)
|+|++...
T Consensus 84 V~~A~~~~ 91 (94)
T d2cpha1 84 LEWADSEV 91 (94)
T ss_dssp EEECCCCC
T ss_pred EEEcCCCC
Confidence 99997654
No 92
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.76 E-value=3e-18 Score=123.35 Aligned_cols=77 Identities=21% Similarity=0.396 Sum_probs=71.8
Q ss_pred CcceEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCCCcEEEEEeCCHHHHHHHHHHcCCCCcccccC--eEeEEEe
Q 020844 152 PQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFG--KQMKCSW 229 (320)
Q Consensus 152 ~~~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g--~~l~v~~ 229 (320)
+++++|||+|||+++++++|+++|++|| .|..+++.+++++|||+|.+.++|..|++.||+. .+.| ++|+|+|
T Consensus 15 ~Ps~tl~V~nLp~~~t~~~l~~~f~~~G--~i~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~---~i~g~~~~l~v~~ 89 (97)
T d1whya_ 15 NPTTRLWVGGLGPNTSLAALAREFDRFG--SIRTIDHVKGDSFAYIQYESLDAAQAACAKMRGF---PLGGPDRRLRVDF 89 (97)
T ss_dssp CCCSCEEEECCCSSCCHHHHHHHHHTTS--CEEEEEECSSSCCEEEEESSHHHHHHHHHHHTTC---BCSSSSCBCEEEE
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhhc--ccceEeeeccccEEEeccCCHHHHHHHHHHhCCC---EeCCCceEEEEEe
Confidence 4558899999999999999999999999 9999999999999999999999999999999999 8876 5899999
Q ss_pred cCCC
Q 020844 230 GSKP 233 (320)
Q Consensus 230 a~~~ 233 (320)
+++.
T Consensus 90 ak~~ 93 (97)
T d1whya_ 90 AKSG 93 (97)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9754
No 93
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.76 E-value=1.5e-18 Score=118.65 Aligned_cols=71 Identities=24% Similarity=0.372 Sum_probs=64.0
Q ss_pred EEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEeccCC
Q 020844 36 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 113 (320)
Q Consensus 36 l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a~~~ 113 (320)
|||+|||+++++++|+++|++|| +..+++ ++++|||||+|.+.++|.+|++.|||..+.|++|+|+++...
T Consensus 1 i~V~nLp~~~t~~~l~~~F~~~g-~~~~~~------~~~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~~l~V~~a~~d 71 (75)
T d1wi6a1 1 ILIRGLPGDVTNQEVHDLLSDYE-LKYCFV------DKYKGTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQPTD 71 (75)
T ss_dssp EEEECCCTTCCHHHHHHHTTTSC-EEEEEE------ETTTTEEEEEESSHHHHHHHHHHHTTEESSSCEEEEEECCST
T ss_pred CEEeCCCCcCCHHHHHHHHhccc-ccceee------cccceeEEEEECCHHHHHHHHHHhCCccCCCCEEEEEEeCCC
Confidence 79999999999999999999999 444443 457899999999999999999999999999999999998654
No 94
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=1e-18 Score=121.21 Aligned_cols=72 Identities=33% Similarity=0.615 Sum_probs=68.0
Q ss_pred EEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC------CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEEe
Q 020844 156 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSW 229 (320)
Q Consensus 156 ~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~~ 229 (320)
+|||+|||+++|+++|+++|++|| .|.++++.++ +|||||+|.+.++|..|++.||+. .+.|++|+|+|
T Consensus 2 slfV~nL~~~~te~~l~~~F~~~G--~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~---~~~gr~i~v~~ 76 (80)
T d1cvja1 2 SLYVGDLHPDVTEAMLYEKFSPAG--PILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFD---VIKGKPVRIMW 76 (80)
T ss_dssp EEEEESCCTTCCHHHHHHHHGGGS--CEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTC---EETTEECEEEE
T ss_pred EEEEeCCCCcCCHHHHHHHHHHhC--CEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCC---EECCEEEEEEE
Confidence 599999999999999999999999 8999999865 589999999999999999999999 99999999999
Q ss_pred cCC
Q 020844 230 GSK 232 (320)
Q Consensus 230 a~~ 232 (320)
++.
T Consensus 77 a~~ 79 (80)
T d1cvja1 77 SQR 79 (80)
T ss_dssp CCC
T ss_pred eCC
Confidence 864
No 95
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=2.5e-19 Score=124.26 Aligned_cols=77 Identities=29% Similarity=0.384 Sum_probs=70.1
Q ss_pred eEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCCCcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEEecCCCC
Q 020844 155 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 234 (320)
Q Consensus 155 ~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~~a~~~~ 234 (320)
++|||+|||.++|+++|+++|++|| .+.++.+.+++|||||+|.+.++|.+|++.|||.. .+.|++|+|.|+.++.
T Consensus 2 n~l~V~nLp~~~te~~L~~~F~~~G--~i~~~~~~~~rg~aFV~f~~~~~A~~Ai~~lng~~--~~~G~~i~V~~a~~k~ 77 (80)
T d2cqha1 2 NKLYIGNLSPAVTADDLRQLFGDRK--LPLAGQVLLKSGYAFVDYPDQNWAIRAIETLSGKV--ELHGKIMEVDYSVSKK 77 (80)
T ss_dssp CCEEEECCCTTCCHHHHHHHHHHTT--CCCSSCEEEETTEEEECCSCHHHHHHHHHHHTTTC--EETTEECEEEECCCCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhC--cEEEeEEecccceEEEEECCHHHHHHHHHHhCCCe--EECCEEEEEEEcCCcC
Confidence 3699999999999999999999999 88888888889999999999999999999999851 5999999999998754
Q ss_pred C
Q 020844 235 P 235 (320)
Q Consensus 235 ~ 235 (320)
.
T Consensus 78 ~ 78 (80)
T d2cqha1 78 L 78 (80)
T ss_dssp C
T ss_pred c
Confidence 3
No 96
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=1.2e-18 Score=123.67 Aligned_cols=75 Identities=25% Similarity=0.422 Sum_probs=70.2
Q ss_pred ceEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC------CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEE
Q 020844 154 YTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKC 227 (320)
Q Consensus 154 ~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v 227 (320)
.++|||+|||.++++++|+++|++|| .|.++++.++ +|||||+|.+.++|.+|++.||+. .+.|+.|+|
T Consensus 8 ~~~i~V~nLp~~~t~~~l~~~f~~~G--~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~---~~~g~~i~v 82 (90)
T d2cq0a1 8 NATIRVTNLSEDTRETDLQELFRPFG--SISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGF---GYDHLILNV 82 (90)
T ss_dssp SEEEEEESCCTTCCHHHHHTTSTTTC--CEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTC---EETTEECEE
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHhc--ccccccccccccccccccceeEEECCHHHHHHHHHHhCCC---EECCEEEEE
Confidence 37899999999999999999999999 8999998764 679999999999999999999999 999999999
Q ss_pred EecCCC
Q 020844 228 SWGSKP 233 (320)
Q Consensus 228 ~~a~~~ 233 (320)
+|++++
T Consensus 83 ~~akp~ 88 (90)
T d2cq0a1 83 EWAKPS 88 (90)
T ss_dssp EESSCC
T ss_pred EeeeCC
Confidence 999765
No 97
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=1.5e-18 Score=125.05 Aligned_cols=75 Identities=27% Similarity=0.465 Sum_probs=68.0
Q ss_pred cceEEEECCCC-ccCcHHHHHHHHhccCCccEEEEEeeCCCcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEEecC
Q 020844 153 QYTTVYVGNLA-PEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGS 231 (320)
Q Consensus 153 ~~~~l~V~nl~-~~~t~~~l~~~F~~~G~~~i~~~~~~~~~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~~a~ 231 (320)
..++|||+||+ ..+++++|+++|++|| .|.++++. +|||||+|.+.++|.+|++.||+. .+.|+.|+|.|++
T Consensus 14 ~~~~lfV~nL~~~~~~~~~L~~~F~~~G--~i~~~~i~--rg~aFV~f~~~~~A~~Ai~~lng~---~~~g~~l~V~~a~ 86 (98)
T d1wf2a_ 14 MNSRVFIGNLNTLVVKKSDVEAIFSKYG--KIVGCSVH--KGFAFVQYVNERNARAAVAGEDGR---MIAGQVLDINLAA 86 (98)
T ss_dssp CCCCEEEEEECTTTCCHHHHHHSSTTSS--CEEEEEEE--TEEEEEEESSHHHHHHHHHTTTTC---EETTEECEEEETT
T ss_pred CCcEEEEeCCCcccCCHHHHHHHHhhcC--CEEEEEEe--CCeEEEEECCHHHHHHHHHHcCCC---EECCEEEEEEECC
Confidence 34679999997 5688999999999999 99999995 689999999999999999999999 9999999999997
Q ss_pred CCC
Q 020844 232 KPT 234 (320)
Q Consensus 232 ~~~ 234 (320)
.+.
T Consensus 87 ~~~ 89 (98)
T d1wf2a_ 87 EPK 89 (98)
T ss_dssp SCC
T ss_pred CCC
Confidence 643
No 98
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.76 E-value=9.1e-18 Score=129.23 Aligned_cols=78 Identities=24% Similarity=0.440 Sum_probs=71.3
Q ss_pred cceEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC------CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeE
Q 020844 153 QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMK 226 (320)
Q Consensus 153 ~~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~ 226 (320)
..++|||+|||.++++++|+++|++|| .|.++++.++ +|||||+|.+.++|.+|++.||+. .|+|+.|+
T Consensus 41 ~~~~l~V~nLp~~~te~~l~~~F~~~G--~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~---~~~gr~l~ 115 (139)
T d1u6fa1 41 VLRNLMVNYIPTTVDEVQLRQLFERYG--PIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGF---NILNKRLK 115 (139)
T ss_dssp TTSEEEEESCSTTCCHHHHHHHHHHHS--CEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTE---ECSSCEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhc--cccccccccccccccccceeeEEECCHHHHHHHHHHhCCC---EECCEEEE
Confidence 346899999999999999999999999 9999998754 689999999999999999999999 99999999
Q ss_pred EEecCCCCC
Q 020844 227 CSWGSKPTP 235 (320)
Q Consensus 227 v~~a~~~~~ 235 (320)
|.|++....
T Consensus 116 V~~a~~~~~ 124 (139)
T d1u6fa1 116 VALAASGHQ 124 (139)
T ss_dssp EEESSCCCC
T ss_pred EEEcCCCCC
Confidence 999976543
No 99
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.76 E-value=1.4e-18 Score=122.17 Aligned_cols=72 Identities=22% Similarity=0.425 Sum_probs=67.0
Q ss_pred EEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC---------CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEE
Q 020844 157 VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD---------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKC 227 (320)
Q Consensus 157 l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~---------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v 227 (320)
|||+|||.++|+++|+++|++|| .|.++.+.++ +|||||+|.+.++|.+|++.||+. .++|+.|+|
T Consensus 1 LfV~nLp~~~t~~~l~~~F~~~G--~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~---~~~g~~i~V 75 (85)
T d2cpfa1 1 LFIKNLNFSTTEETLKGVFSKVG--AIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGH---TVDGHKLEV 75 (85)
T ss_dssp EEEESCCTTCCHHHHHHHHHTTS--CEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTC---EETTEECEE
T ss_pred CEEcCCCCCCCHHHHHHHHHHhC--CccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCC---EECCEEEEE
Confidence 79999999999999999999999 8999988743 689999999999999999999999 999999999
Q ss_pred EecCCC
Q 020844 228 SWGSKP 233 (320)
Q Consensus 228 ~~a~~~ 233 (320)
.|++..
T Consensus 76 ~~a~~~ 81 (85)
T d2cpfa1 76 RISERA 81 (85)
T ss_dssp ECSSCS
T ss_pred EECCCC
Confidence 998654
No 100
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.76 E-value=5.1e-18 Score=123.77 Aligned_cols=84 Identities=17% Similarity=0.166 Sum_probs=73.7
Q ss_pred CcCCCCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHh--CCCeeCCee
Q 020844 27 REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL--TGKWLGSRQ 104 (320)
Q Consensus 27 ~~~~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l--~~~~~~g~~ 104 (320)
.....++++|||+|||.++||+||+++|++||.|.++++.++ ||||||+|.+.++|+.|++.+ ++..+.|++
T Consensus 9 ~~~~~ps~~l~v~nlp~~~te~~l~~~F~~fG~I~~~~~~~~------k~~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~ 82 (104)
T d1wexa_ 9 HHKVSVSPVVHVRGLCESVVEADLVEALEKFGTICYVMMMPF------KRQALVEFENIDSAKECVTFAADVPVYIAGQQ 82 (104)
T ss_dssp CCCCCCCSEEEEESCCSSCCHHHHHHHHTTTSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHHHSCCBSSSSB
T ss_pred CCcCCCCCEEEEeCCCCCCCHHHHHHhhhhcccceEEEEEec------ceeEEEEeCCHHHHHHHHHHHcCCCcEEeeEE
Confidence 345567889999999999999999999999999999999754 479999999999999999987 566789999
Q ss_pred EEEEeccCCCCC
Q 020844 105 IRCNWATKGAGN 116 (320)
Q Consensus 105 l~v~~a~~~~~~ 116 (320)
|+|.|+..+...
T Consensus 83 l~v~~s~~~~~~ 94 (104)
T d1wexa_ 83 AFFNYSTSKRIT 94 (104)
T ss_dssp CEEEECSSSSCC
T ss_pred EEEEEcCCCccC
Confidence 999999775443
No 101
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.76 E-value=1.7e-18 Score=119.47 Aligned_cols=72 Identities=25% Similarity=0.331 Sum_probs=67.9
Q ss_pred EEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC-----CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEEec
Q 020844 156 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 230 (320)
Q Consensus 156 ~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~-----~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~~a 230 (320)
+|||+|||+++++++|+++|++|| .|.++++.++ +|+|||+|.+.++|.+|++.||+. .++|+.|+|+++
T Consensus 2 rl~V~nLp~~~~~~~l~~~F~~~G--~v~~~~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~---~l~g~~l~V~~a 76 (78)
T d1no8a_ 2 KLLVSNLDFGVSDADIQELFAEFG--TLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGV---PLDGRPMNIQLV 76 (78)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHS--CEEEEEESCSSCCCSCCEEEEEESCHHHHHHHHHHHTTC---EETTEECEEEEE
T ss_pred EEEEECCCCCCCHHHHHHHHHHhC--CCeEEEEEEeeccccceeEEEEECCHHHHHHHHHHhCCC---EECCEEEEEEEe
Confidence 599999999999999999999999 9999999865 789999999999999999999999 999999999998
Q ss_pred CC
Q 020844 231 SK 232 (320)
Q Consensus 231 ~~ 232 (320)
.+
T Consensus 77 ~S 78 (78)
T d1no8a_ 77 TS 78 (78)
T ss_dssp CC
T ss_pred eC
Confidence 53
No 102
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=2.5e-18 Score=138.83 Aligned_cols=107 Identities=18% Similarity=0.272 Sum_probs=94.3
Q ss_pred ccCcccCCCceEEEecccCCCC---cCCCCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEe
Q 020844 6 LNGRHLFGQPIKVNWAYASGQR---EDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 82 (320)
Q Consensus 6 l~g~~~~g~~i~v~~~~~~~~~---~~~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f 82 (320)
+++..+.++++.+.+..+.... ......++|||+|||+++|+++|+++|+.||.|..+.|+.++.+|.++|||||+|
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~V~~lp~~~te~~L~~~f~~~G~v~~~~i~~~~~~~~~~g~~fV~f 146 (183)
T d1u1qa_ 67 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTF 146 (183)
T ss_dssp TCSCEETTEECEEEECCCTTGGGSTTTTCCCSEEEEECCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEE
T ss_pred hcCCcccccchhhhhhhhcccccccccccccceeEEccCCCcCCHHHHhhhhccCCceeeeeeecccccCccceeEEEEE
Confidence 5667788888888877655543 3455678999999999999999999999999999999999998999999999999
Q ss_pred cCHHHHHHHHHHhCCCeeCCeeEEEEeccCC
Q 020844 83 RNQQDAQSAINDLTGKWLGSRQIRCNWATKG 113 (320)
Q Consensus 83 ~~~~~A~~A~~~l~~~~~~g~~l~v~~a~~~ 113 (320)
.+.++|.+|++ +++..+.|++|+|.++.++
T Consensus 147 ~~~e~A~~Al~-~~~~~~~G~~i~V~~A~~k 176 (183)
T d1u1qa_ 147 DDHDSVDKIVI-QKYHTVNGHNCEVRKALSK 176 (183)
T ss_dssp SCHHHHHHHHT-SSCEEETTEEEEEEECCCH
T ss_pred CCHHHHHHHHH-hCCCeECCEEEEEEecCCc
Confidence 99999999995 7889999999999998654
No 103
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=4.5e-19 Score=131.26 Aligned_cols=83 Identities=24% Similarity=0.385 Sum_probs=74.4
Q ss_pred CCCCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEE
Q 020844 29 DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 108 (320)
Q Consensus 29 ~~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~ 108 (320)
.....++|||+|||+++|++||+++|+.||.+..+.++.+..+|.++|||||+|.+.++|.+|+ .+|+..|.||.|.|.
T Consensus 14 ~~~~~~~i~v~nLp~~~t~~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al-~~~~~~i~gR~i~V~ 92 (112)
T d1wela1 14 PHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAAL-CRHKQYMGNRFIQVH 92 (112)
T ss_dssp CCCCCCEEEEECCCTTCCHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHH-TSCSBCSTTSCBEEE
T ss_pred CCCCCeEEEEecCCCcCcHHHHhhHHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHH-HcCCCcCCCEEEEEE
Confidence 3456779999999999999999999999999977666666679999999999999999999999 599999999999999
Q ss_pred eccC
Q 020844 109 WATK 112 (320)
Q Consensus 109 ~a~~ 112 (320)
++..
T Consensus 93 ~~~~ 96 (112)
T d1wela1 93 PITK 96 (112)
T ss_dssp EECH
T ss_pred EcCh
Confidence 8754
No 104
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=1.1e-18 Score=123.23 Aligned_cols=74 Identities=22% Similarity=0.260 Sum_probs=68.0
Q ss_pred eEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCCCcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEEecCCCC
Q 020844 155 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKPT 234 (320)
Q Consensus 155 ~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~~a~~~~ 234 (320)
++|||+|||++++++||+++|++|| +..+.+.+.+|+|||+|.+.++|.+|++.||+. .+.|+.|+|+|++.+.
T Consensus 6 ~~i~V~nLp~~~t~~~l~~lF~~~G---~~~~~~~~~kg~afV~f~~~~~A~~Ai~~ln~~---~~~G~~l~V~~a~~~~ 79 (88)
T d1wg1a_ 6 SGILVKNLPQDSNCQEVHDLLKDYD---LKYCYVDRNKRTAFVTLLNGEQAQNAIQMFHQY---SFRGKDLIVQLQPTDA 79 (88)
T ss_dssp CCEEEESCCSSCCHHHHHHHTCSSC---CCCEEEEGGGTEEEECCSCHHHHHHHHHHHTTE---EETTEEEEEEECCCCC
T ss_pred CEEEEeCCCCccChHHHHHHHHhcC---ceeeeeeccCCceEEEECCHHHHHHHHHHhCCC---EECCEEEEEEEcCCCC
Confidence 6799999999999999999999998 445677788999999999999999999999999 9999999999986543
No 105
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75 E-value=1.8e-18 Score=125.80 Aligned_cols=79 Identities=14% Similarity=0.060 Sum_probs=71.2
Q ss_pred ceEEEECCCCccC-cH----HHHHHHHhccCCccEEEEEeeCCCcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEE
Q 020844 154 YTTVYVGNLAPEV-TQ----LDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 228 (320)
Q Consensus 154 ~~~l~V~nl~~~~-t~----~~l~~~F~~~G~~~i~~~~~~~~~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~ 228 (320)
.++|||+||+.++ ++ ++|+++|++|| .|.++++.+++++|||+|.+.++|.+|++.||+. .+.|+.|+|.
T Consensus 5 ~~~L~v~nl~~~v~~~d~~k~~l~~lF~~~G--~i~~~~~~k~~~~afV~f~~~~~A~~Ai~~lng~---~~~g~~l~v~ 79 (104)
T d1weya_ 5 SSGLIACVANDDVFSESETRAKFESLFRTYD--KDTTFQYFKSFKRVRINFSNPLSAADARLRLHKT---EFLGKEMKLY 79 (104)
T ss_dssp CCEEEEECCCGGGGSTTTHHHHHHHHHHTTC--SSCEEEEETTTTEEEEECSSTTHHHHHHHTSTTS---EETTEECEEE
T ss_pred CceEEEEeCCchhcCcHHHHHHHHHHhcccc--cceEEEEecCCCEEEEEECCHHHHHHHHHHhccc---ccCCCEeEEe
Confidence 3789999999987 33 56999999999 9999999999999999999999999999999999 9999999999
Q ss_pred ecCCCCCCC
Q 020844 229 WGSKPTPPG 237 (320)
Q Consensus 229 ~a~~~~~~~ 237 (320)
|++......
T Consensus 80 ~a~~~~~~~ 88 (104)
T d1weya_ 80 FAQTLHIGS 88 (104)
T ss_dssp CCCCSSCCS
T ss_pred ecccCCCCC
Confidence 997664433
No 106
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=1.3e-18 Score=123.20 Aligned_cols=75 Identities=25% Similarity=0.382 Sum_probs=70.3
Q ss_pred eEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC----CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEEec
Q 020844 155 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD----KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 230 (320)
Q Consensus 155 ~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~----~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~~a 230 (320)
.+|||+|||.++++++|+++|++|| .|..+++..+ +|||||+|.+.++|.+|++.||+. .++|+.|+|+++
T Consensus 9 ~~l~V~nLp~~~t~~~l~~~F~~~G--~v~~~~i~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~---~~~g~~i~V~~a 83 (89)
T d1cvja2 9 GNIFIKNLDKSIDNKALYDTFSAFG--NILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGM---LLNDRKVFVGRF 83 (89)
T ss_dssp TEEEEESCCSSCCHHHHHHHHHTTS--CEEEEEECCBTTBCCSCEEEEESCHHHHHHHTTSSSEE---EETTEEEEEEEC
T ss_pred CEEEEeCCCCCCCHHHHHHHHHhcC--CceEEEEEeecCCCcceeEEEECCHHHHHHHHHHcCCC---EECCEEEEEEEC
Confidence 5799999999999999999999999 9999999866 789999999999999999999999 999999999999
Q ss_pred CCCC
Q 020844 231 SKPT 234 (320)
Q Consensus 231 ~~~~ 234 (320)
+++.
T Consensus 84 ~~~~ 87 (89)
T d1cvja2 84 KSRK 87 (89)
T ss_dssp CCTT
T ss_pred CCCC
Confidence 7653
No 107
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=1.6e-18 Score=121.55 Aligned_cols=74 Identities=20% Similarity=0.300 Sum_probs=69.5
Q ss_pred eEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC------CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEE
Q 020844 155 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 228 (320)
Q Consensus 155 ~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~ 228 (320)
.+|||+|||.++|+++|+++|++|| .|.++++.++ +|||||+|.+.++|..|++.||+. .++|+.|+|.
T Consensus 2 ~rlfV~nlp~~~te~~l~~~F~~~G--~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~---~l~g~~l~V~ 76 (85)
T d2u2fa_ 2 HKLFIGGLPNYLNDDQVKELLTSFG--PLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGM---QLGDKKLLVQ 76 (85)
T ss_dssp CCEEEETCCSSCCSHHHHHHHTSSS--CEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSC---CCSSSCCEEE
T ss_pred CEEEEECCCCCCCHHHHHHHHHhcC--ccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCC---EECCEEEEEE
Confidence 4699999999999999999999999 8999999764 799999999999999999999999 9999999999
Q ss_pred ecCCC
Q 020844 229 WGSKP 233 (320)
Q Consensus 229 ~a~~~ 233 (320)
|++..
T Consensus 77 ~A~~~ 81 (85)
T d2u2fa_ 77 RASVG 81 (85)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 99754
No 108
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=2e-18 Score=122.65 Aligned_cols=76 Identities=29% Similarity=0.488 Sum_probs=70.1
Q ss_pred eEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC------CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEE
Q 020844 155 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 228 (320)
Q Consensus 155 ~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~ 228 (320)
++|||+|||+++++++|+++|++|| .|..+.+.++ +|||||+|.++++|..|++.||+. .++|+.|+|+
T Consensus 6 ~kifV~nLp~~~t~~~l~~~F~~~G--~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~---~~~g~~l~V~ 80 (90)
T d1x5sa1 6 GKLFVGGLSFDTNEQSLEQVFSKYG--QISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGK---SVDGRQIRVD 80 (90)
T ss_dssp SEEEEESCCTTCCHHHHHHHHHHHS--CCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTC---CTTSCCCEEE
T ss_pred CEEEEECCCCcCCHHHHHHhhhccc--cccceeeccccccccccceEEEEECCHHHHHHHHHHcCCC---EECCEEEEEE
Confidence 6799999999999999999999999 8888887654 789999999999999999999999 9999999999
Q ss_pred ecCCCCC
Q 020844 229 WGSKPTP 235 (320)
Q Consensus 229 ~a~~~~~ 235 (320)
|+.++..
T Consensus 81 ~a~~~~~ 87 (90)
T d1x5sa1 81 QAGKSSD 87 (90)
T ss_dssp EEECCCC
T ss_pred EcCCCCC
Confidence 9876654
No 109
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=5.6e-18 Score=123.28 Aligned_cols=77 Identities=29% Similarity=0.461 Sum_probs=68.9
Q ss_pred CcceEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC------CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEe
Q 020844 152 PQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQM 225 (320)
Q Consensus 152 ~~~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l 225 (320)
...++|||+|||+++++++|+++|++|| .|.++++.++ +|||||+|.+.++|.+|++.+|+ .++|+.|
T Consensus 8 ~~~~~lfV~nLp~~~te~~l~~~F~~~G--~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~----~l~Gr~l 81 (103)
T d2cqda1 8 TTFTKIFVGGLPYHTTDASLRKYFEGFG--DIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP----IIDGRKA 81 (103)
T ss_dssp CSSSEEEEECCCSSCCHHHHHHHHHTTS--CEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC----EETTEEC
T ss_pred CCCcEEEEeCCCCcCcHHHHHHHHhhcc--cccceeccccccccccCCeEEEEECCHHHHHHHHHHCCC----cCCCEEE
Confidence 3447899999999999999999999999 9999999754 78999999999999999998864 4899999
Q ss_pred EEEecCCCC
Q 020844 226 KCSWGSKPT 234 (320)
Q Consensus 226 ~v~~a~~~~ 234 (320)
+|+++..+.
T Consensus 82 ~V~~a~~~~ 90 (103)
T d2cqda1 82 NVNLAYLGA 90 (103)
T ss_dssp EEEESTTTC
T ss_pred EEEEcCCCC
Confidence 999987653
No 110
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75 E-value=1.4e-17 Score=121.41 Aligned_cols=79 Identities=19% Similarity=0.222 Sum_probs=72.1
Q ss_pred CCcceEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCCCcEEEEEeCCHHHHHHHHHHc--CCCCcccccCeEeEEE
Q 020844 151 NPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMG--NTTQSSYLFGKQMKCS 228 (320)
Q Consensus 151 ~~~~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~~g~afV~f~~~~~A~~A~~~l--~~~~~~~~~g~~l~v~ 228 (320)
.+++++|||+|||.++++++|+++|++|| .|..+.+.+++++|||+|.+.++|..|+..+ ++. .++|++|+|.
T Consensus 12 ~~ps~~l~v~nlp~~~te~~l~~~F~~fG--~I~~~~~~~~k~~AfV~f~~~e~A~~ai~~~~~~~~---~~~g~~l~v~ 86 (104)
T d1wexa_ 12 VSVSPVVHVRGLCESVVEADLVEALEKFG--TICYVMMMPFKRQALVEFENIDSAKECVTFAADVPV---YIAGQQAFFN 86 (104)
T ss_dssp CCCCSEEEEESCCSSCCHHHHHHHHTTTS--CEEEEEEETTTTEEEEEESSHHHHHHHHHHHHHSCC---BSSSSBCEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHhhhhcc--cceEEEEEecceeEEEEeCCHHHHHHHHHHHcCCCc---EEeeEEEEEE
Confidence 34568999999999999999999999999 9999999999999999999999999999987 455 7899999999
Q ss_pred ecCCCC
Q 020844 229 WGSKPT 234 (320)
Q Consensus 229 ~a~~~~ 234 (320)
|++.+.
T Consensus 87 ~s~~~~ 92 (104)
T d1wexa_ 87 YSTSKR 92 (104)
T ss_dssp ECSSSS
T ss_pred EcCCCc
Confidence 997654
No 111
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=3.2e-18 Score=121.05 Aligned_cols=77 Identities=21% Similarity=0.287 Sum_probs=68.0
Q ss_pred CcceEEEECCCCccCcHHHHHHHHhccCCccEEEEEee--CCCcEEEEEeCCHHHHHHHHHHcCCCCcccc-cCeEeEEE
Q 020844 152 PQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQ--RDKGFGFVRYSTHAEAALAIQMGNTTQSSYL-FGKQMKCS 228 (320)
Q Consensus 152 ~~~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~--~~~g~afV~f~~~~~A~~A~~~l~~~~~~~~-~g~~l~v~ 228 (320)
+++++|||+|||.++++++|+++|++|| .|..+.+. +++|+|||+|.+.++|.+|+..||+. .+ +|+.|+|+
T Consensus 8 pPs~tL~V~NLp~~~te~~l~~~F~~~G--~v~~~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~---~i~~g~~l~v~ 82 (88)
T d2adca2 8 PPSATLHLSNIPPSVSEEDLKVLFSSNG--GVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNH---DLGENHHLRVS 82 (88)
T ss_dssp CSCSEEEEECCCTTCCHHHHHHHHHTTS--CCEEEEEECSSSTTCEEEEESSHHHHHHHHHHHTTC---BSSSSCBCEEE
T ss_pred CCCCEEEEECCCCCCCHHHHHHHhhccC--CEEEEEEeeecccceeEEEECCHHHHHHHHHhccCC---EecCCCEEEEE
Confidence 3457999999999999999999999999 67666554 45899999999999999999999999 77 58999999
Q ss_pred ecCCC
Q 020844 229 WGSKP 233 (320)
Q Consensus 229 ~a~~~ 233 (320)
|+++.
T Consensus 83 ~sk~~ 87 (88)
T d2adca2 83 FSKST 87 (88)
T ss_dssp ECSSC
T ss_pred eCCCC
Confidence 98764
No 112
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.74 E-value=2.2e-18 Score=119.93 Aligned_cols=73 Identities=14% Similarity=0.257 Sum_probs=66.0
Q ss_pred eEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeC------CCcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEE
Q 020844 155 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQR------DKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 228 (320)
Q Consensus 155 ~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~------~~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~ 228 (320)
++|||+|||+++|+++|+++|++|| .|..+.+.. ++|||||+|.+.++|.+|++.||+. .++|++|+|+
T Consensus 2 ~tl~v~nLp~~~t~~~l~~~f~~~G--~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~---~~~g~~i~V~ 76 (81)
T d2ghpa1 2 CTLWMTNFPPSYTQRNIRDLLQDIN--VVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGL---KIEGYTLVTK 76 (81)
T ss_dssp CEEEEECCCTTCCHHHHHHHHHHTT--CCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTC---EETTEECEEE
T ss_pred cEEEEECCCCcCCHHHHHHHHHHhC--cEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCC---EECCEEEEEE
Confidence 6899999999999999999999999 776665543 3799999999999999999999999 9999999999
Q ss_pred ecCC
Q 020844 229 WGSK 232 (320)
Q Consensus 229 ~a~~ 232 (320)
|+++
T Consensus 77 ~a~P 80 (81)
T d2ghpa1 77 VSNP 80 (81)
T ss_dssp ECCC
T ss_pred EccC
Confidence 9864
No 113
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=5.9e-18 Score=119.59 Aligned_cols=79 Identities=14% Similarity=0.173 Sum_probs=72.3
Q ss_pred CCcceEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCCCcEEEEEeCCHHHHHHHHHHc--CCCCcccccCeEeEEE
Q 020844 151 NPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMG--NTTQSSYLFGKQMKCS 228 (320)
Q Consensus 151 ~~~~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~~g~afV~f~~~~~A~~A~~~l--~~~~~~~~~g~~l~v~ 228 (320)
.+++++|||+|||.++++++|+++|++|| .|.++++.+++++|||+|.+.++|.+|++.+ ++. .+.|++|+|+
T Consensus 5 ~~Ps~~l~V~nLp~~~t~~~L~~~f~~~G--~i~~v~~~~~~~~afV~f~~~e~A~~a~~~~~~~~~---~~~g~~l~v~ 79 (88)
T d2cq1a1 5 GAPSRVLHIRKLPGEVTETEVIALGLPFG--KVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTP---HLRNQPIYIQ 79 (88)
T ss_dssp SSCCSEEEEESCCTTCCHHHHHHTTTTTS--CEEEEEEETTTTEEEEEESSHHHHHHHHHHHHHSCC---EETTEECEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHhccc--ccccccccccceEEEEEeCCHHHHHHHHHHHccCCC---ccCCCEEEEE
Confidence 44568999999999999999999999999 9999999999999999999999999999865 567 8999999999
Q ss_pred ecCCCC
Q 020844 229 WGSKPT 234 (320)
Q Consensus 229 ~a~~~~ 234 (320)
|++.+.
T Consensus 80 ~sk~~~ 85 (88)
T d2cq1a1 80 YSNHKE 85 (88)
T ss_dssp ECSCSS
T ss_pred ECCCCC
Confidence 997654
No 114
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.74 E-value=3e-18 Score=123.72 Aligned_cols=80 Identities=14% Similarity=0.238 Sum_probs=71.4
Q ss_pred CCCCceeEEEcCCCcc-CcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHH--HhCCCeeCCeeE
Q 020844 29 DTSGHFNIFVGDLSPE-VTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIN--DLTGKWLGSRQI 105 (320)
Q Consensus 29 ~~~~~~~l~V~nLp~~-~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~--~l~~~~~~g~~l 105 (320)
....+++|||+|||.+ +||++|+++|++||.|.+++++++ +|||||+|.+.++|.+|++ .+++..+.|++|
T Consensus 14 ~~~~~~~l~v~nLp~~~~te~~l~~~F~~fG~V~~v~~~~~------k~~afV~f~~~~~A~~Ai~~~~~~~~~~~gr~l 87 (99)
T d1x4fa1 14 KQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM------KSQAFIEMETREDAMAMVDHCLKKALWFQGRCV 87 (99)
T ss_dssp SSCCCCEEEEESCCCSSCCSHHHHTTTTTTSCCSEEEEETT------TTEEEEECSSHHHHHHHHHHHHHSCCCSSSSCC
T ss_pred CCCCCCEEEEeCCcCCccCHHHHHhhhccccceeEEEEeec------CCcEEEEecchHHHHHHHHHHhcCCceECCEEE
Confidence 4456789999999985 899999999999999999999865 4799999999999999997 468889999999
Q ss_pred EEEeccCCC
Q 020844 106 RCNWATKGA 114 (320)
Q Consensus 106 ~v~~a~~~~ 114 (320)
+|.++..+.
T Consensus 88 ~V~~s~~~~ 96 (99)
T d1x4fa1 88 KVDLSEKYK 96 (99)
T ss_dssp EEEEECSCS
T ss_pred EEEEcCCcc
Confidence 999997654
No 115
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=3.6e-18 Score=119.84 Aligned_cols=71 Identities=30% Similarity=0.470 Sum_probs=65.8
Q ss_pred eEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC------CcEEEEEeCCHHHHHHHHHHcCCCCcccccC--eEeE
Q 020844 155 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFG--KQMK 226 (320)
Q Consensus 155 ~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g--~~l~ 226 (320)
++|||+|||.++|+++|+++|++|| .|.++++.++ +|||||+|.+.++|.+|++.||+. .+.| ++|+
T Consensus 7 ~~lfV~nLp~~~te~~L~~~F~~~G--~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~---~~~G~~~~i~ 81 (85)
T d1fxla2 7 ANLYVSGLPKTMTQKELEQLFSQYG--RIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ---KPSGATEPIT 81 (85)
T ss_dssp CEEEEESCCTTCCHHHHHHHHGGGS--CEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTC---CCTTCSSCCE
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHhC--CccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCC---EeCCCCEEEE
Confidence 6799999999999999999999999 9999998754 679999999999999999999999 8987 5699
Q ss_pred EEec
Q 020844 227 CSWG 230 (320)
Q Consensus 227 v~~a 230 (320)
|+||
T Consensus 82 V~~A 85 (85)
T d1fxla2 82 VKFA 85 (85)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 9986
No 116
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=6.4e-18 Score=125.54 Aligned_cols=74 Identities=19% Similarity=0.273 Sum_probs=69.6
Q ss_pred ceEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC---CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEEec
Q 020844 154 YTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD---KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 230 (320)
Q Consensus 154 ~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~---~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~~a 230 (320)
+++|||+|||.++++++|+++|++|| .|.+|++..+ +|||||+|.+.++|..|++.|||. .|.|+.|+|.|+
T Consensus 7 ~r~l~V~nLp~~~te~~l~~~F~~~G--~v~~i~~~~~~~~kG~afV~f~~~~~A~~Ai~~l~g~---~~~gr~l~V~~a 81 (114)
T d2f9da1 7 NRILYIRNLPYKITAEEMYDIFGKYG--PIRQIRVGNTPETRGTAYVVYEDIFDAKNACDHLSGF---NVCNRYLVVLYY 81 (114)
T ss_dssp CSEEEEESCCTTCCHHHHHHHHHTTS--CEEEEEEECSTTTTTEEEEEESSHHHHHHHHHHHTTC---EETTEECEEEEC
T ss_pred CCEEEEECCCCCCCHHHHHHHHhhcC--CeEeecccccCCcCCeEEEEECCHHHHHHHHHHhCCC---EECCEEEEEEEc
Confidence 37899999999999999999999999 9999999865 899999999999999999999999 999999999997
Q ss_pred CC
Q 020844 231 SK 232 (320)
Q Consensus 231 ~~ 232 (320)
..
T Consensus 82 ~~ 83 (114)
T d2f9da1 82 NA 83 (114)
T ss_dssp CH
T ss_pred CC
Confidence 53
No 117
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.74 E-value=4.5e-18 Score=119.41 Aligned_cols=71 Identities=32% Similarity=0.464 Sum_probs=66.1
Q ss_pred eEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC------CcEEEEEeCCHHHHHHHHHHcCCCCcccccC--eEeE
Q 020844 155 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFG--KQMK 226 (320)
Q Consensus 155 ~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g--~~l~ 226 (320)
++|||+|||.++++++|+++|++|| .|.++++.++ +|||||+|.+.++|.+|++.||+. .+.| ++|+
T Consensus 7 t~lfV~nlp~~~te~~l~~~F~~~G--~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~---~~~g~~~~l~ 81 (85)
T d1b7fa2 7 TNLYVTNLPRTITDDQLDTIFGKYG--SIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNV---IPEGGSQPLS 81 (85)
T ss_dssp CEEEEESCCTTCCHHHHHHHHTSSS--CEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTC---CCTTCSSCCE
T ss_pred CEEEEeCCCCCCCHHHHHHHHHhhC--CEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCC---EeCCCCeEEE
Confidence 6799999999999999999999999 9999998864 689999999999999999999999 7876 8899
Q ss_pred EEec
Q 020844 227 CSWG 230 (320)
Q Consensus 227 v~~a 230 (320)
|+||
T Consensus 82 V~~A 85 (85)
T d1b7fa2 82 VRLA 85 (85)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9986
No 118
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.74 E-value=6.4e-18 Score=119.40 Aligned_cols=80 Identities=14% Similarity=0.152 Sum_probs=71.5
Q ss_pred CCCCceeEEEcCCCcc-CcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHh--CCCeeCCeeE
Q 020844 29 DTSGHFNIFVGDLSPE-VTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL--TGKWLGSRQI 105 (320)
Q Consensus 29 ~~~~~~~l~V~nLp~~-~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l--~~~~~~g~~l 105 (320)
..+++++|||+|||.. +|++||+++|++||.|.++.+++++ ++|||+|.+.++|..|++.| ++..+.|++|
T Consensus 4 ~~~~sr~v~v~nl~~~~~t~~eL~~lF~~fG~I~~i~i~~~k------~~afV~f~~~~~A~~A~~~l~~~~~~~~gr~l 77 (89)
T d1x4da1 4 RVETRRVVHIMDFQRGKNLRYQLLQLVEPFGVISNHLILNKI------NEAFIEMATTEDAQAAVDYYTTTPALVFGKPV 77 (89)
T ss_dssp CCCCCCEEEEESCCCSSSHHHHHHTTTGGGSCEEEEEECSSS------SCEEEEESSHHHHHHHHHHHHHSCCEETTEEC
T ss_pred CCCCCcEEEEECCCCCcCCHHHHHHHHHhhCCeEEEEeeccc------eEEEEEEcchhhHHHHHHHHhhCCCccCCceE
Confidence 4567889999999986 8999999999999999999998764 59999999999999999966 6788999999
Q ss_pred EEEeccCCC
Q 020844 106 RCNWATKGA 114 (320)
Q Consensus 106 ~v~~a~~~~ 114 (320)
+|.|+....
T Consensus 78 ~V~~s~~~~ 86 (89)
T d1x4da1 78 RVHLSQKYK 86 (89)
T ss_dssp EEEEECCCT
T ss_pred EEEECCCcc
Confidence 999997643
No 119
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=9.1e-18 Score=123.71 Aligned_cols=76 Identities=25% Similarity=0.347 Sum_probs=69.9
Q ss_pred ceEEEECCCCc-cCcHHHHHHHHhccCCccEEEEEeeCC-CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEEecC
Q 020844 154 YTTVYVGNLAP-EVTQLDLHRHFHSLGAGVIEEVRVQRD-KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGS 231 (320)
Q Consensus 154 ~~~l~V~nl~~-~~t~~~l~~~F~~~G~~~i~~~~~~~~-~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~~a~ 231 (320)
+++|||+||++ .+++++|+++|++|| .|..+.+.++ +|+|||+|.+.++|.+|++.||+. .+.|+.|+|.|++
T Consensus 2 ~~~l~V~nL~p~~~te~~L~~~F~~fG--~I~~v~i~~~~kg~afV~f~~~~~A~~ai~~lng~---~l~g~~l~v~~s~ 76 (109)
T d2adca1 2 NSVLLVSNLNPERVTPQSLFILFGVYG--DVQRVKILFNKKENALVQMADGNQAQLAMSHLNGH---KLHGKPIRITLSK 76 (109)
T ss_dssp CSEEEEESCCTTTCCHHHHHHHHHHHT--CEEEEEECCTTSCCEEEEESCHHHHHHHHHHHTTC---BCSSSBCEEECCS
T ss_pred CCEEEEeCCCcccCCHHHHHHHHhhcc--ccceEEEEecccceEEEEECCHHHHHHHHHHhCCC---EECCEEEEEEECC
Confidence 36899999965 599999999999999 9999999887 689999999999999999999999 9999999999987
Q ss_pred CCC
Q 020844 232 KPT 234 (320)
Q Consensus 232 ~~~ 234 (320)
...
T Consensus 77 ~~~ 79 (109)
T d2adca1 77 HQN 79 (109)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 120
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.73 E-value=8.4e-18 Score=114.84 Aligned_cols=71 Identities=18% Similarity=0.256 Sum_probs=67.4
Q ss_pred EEECCCCccCcHHHHHHHHhccCCccEEEEEeeCCCcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEEecCCC
Q 020844 157 VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKP 233 (320)
Q Consensus 157 l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~~a~~~ 233 (320)
|||+|||+++++++|+++|++|| +..+.+.+.+|+|||+|.+.++|.+|++.||+. .+.|++|+|+|++..
T Consensus 1 i~V~nLp~~~t~~~l~~~F~~~g---~~~~~~~~~~g~afv~f~~~~~A~~Ai~~ln~~---~~~g~~l~V~~a~~d 71 (75)
T d1wi6a1 1 ILIRGLPGDVTNQEVHDLLSDYE---LKYCFVDKYKGTAFVTLLNGEQAEAAINTFHQS---RLRERELSVQLQPTD 71 (75)
T ss_dssp EEEECCCTTCCHHHHHHHTTTSC---EEEEEEETTTTEEEEEESSHHHHHHHHHHHTTE---ESSSCEEEEEECCST
T ss_pred CEEeCCCCcCCHHHHHHHHhccc---ccceeecccceeEEEEECCHHHHHHHHHHhCCc---cCCCCEEEEEEeCCC
Confidence 79999999999999999999998 778888999999999999999999999999999 999999999998654
No 121
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=6.4e-18 Score=118.07 Aligned_cols=70 Identities=27% Similarity=0.364 Sum_probs=65.1
Q ss_pred cceEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC------CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeE
Q 020844 153 QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMK 226 (320)
Q Consensus 153 ~~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~ 226 (320)
+.++|||+|||.++|+++|+++|++|| .|.++++.++ +|||||+|.+.++|..|++.||+. .++|+.|+
T Consensus 8 ~~~~l~V~nL~~~~te~~l~~~F~~~G--~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~---~~~gr~i~ 82 (83)
T d2cqca1 8 PNCCLGVFGLSLYTTERDLREVFSKYG--PIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGM---ELDGRRIR 82 (83)
T ss_dssp GGGCEEEESCCSSCCHHHHHHHHHTTS--CEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTE---EETTEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhC--CCccccccccccccccccceEEEECCHHHHHHHHHHcCCC---EECCEEeE
Confidence 347899999999999999999999999 8999988754 679999999999999999999999 99999998
Q ss_pred E
Q 020844 227 C 227 (320)
Q Consensus 227 v 227 (320)
|
T Consensus 83 V 83 (83)
T d2cqca1 83 V 83 (83)
T ss_dssp E
T ss_pred C
Confidence 7
No 122
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=6.2e-18 Score=118.19 Aligned_cols=74 Identities=30% Similarity=0.614 Sum_probs=65.5
Q ss_pred EEECCCCccCcHHHHHHHHhccCCccEEEE-EeeCC------CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEEe
Q 020844 157 VYVGNLAPEVTQLDLHRHFHSLGAGVIEEV-RVQRD------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSW 229 (320)
Q Consensus 157 l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~-~~~~~------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~~ 229 (320)
|||+|||.++++++|+++|++|| .|.++ ++.++ +|||||+|.+.++|.+|++.||+. .+.|++|+|+|
T Consensus 1 lfV~nLp~~~te~~l~~~F~~~G--~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~---~~~gr~l~v~~ 75 (83)
T d1x5ta1 1 IFIGNLDPEIDEKLLYDTFSAFG--VILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQ---YLCNRPITVSY 75 (83)
T ss_dssp EEEECCCTTCCHHHHHHHHHTTS--CBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTC---EETTEECEEEE
T ss_pred CEEcCCCCcCcHHHHHHHHHHhC--ceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCc---EECCEEEEEEE
Confidence 79999999999999999999999 66543 45433 799999999999999999999999 99999999999
Q ss_pred cCCCCC
Q 020844 230 GSKPTP 235 (320)
Q Consensus 230 a~~~~~ 235 (320)
+.++..
T Consensus 76 a~~k~~ 81 (83)
T d1x5ta1 76 AFKKDS 81 (83)
T ss_dssp SCCCCC
T ss_pred ecCCCc
Confidence 976543
No 123
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=1.2e-17 Score=121.31 Aligned_cols=81 Identities=26% Similarity=0.373 Sum_probs=68.5
Q ss_pred CCCcceEEEECCCCccCcHHHHHHHHhccCCccEE--------EEEeeC------CCcEEEEEeCCHHHHHHHHHHcCCC
Q 020844 150 NNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIE--------EVRVQR------DKGFGFVRYSTHAEAALAIQMGNTT 215 (320)
Q Consensus 150 ~~~~~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~--------~~~~~~------~~g~afV~f~~~~~A~~A~~~l~~~ 215 (320)
.....++|||+|||.++|+++|+++|+.|| .|. .+.+.+ .+|+|||+|.+.++|.+|++.||+.
T Consensus 4 ~~~~~~~i~V~nLp~~~te~~l~~~F~~~G--~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~ 81 (101)
T d2cpea1 4 EDSDNSAIYVQGLNDSVTLDDLADFFKQCG--VVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGK 81 (101)
T ss_dssp CCCCCCEEEEECCCTTCCHHHHHHHHTTTS--CBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTC
T ss_pred CCCCCCEEEEECCCCcCCHHHHHHHHHHCc--eEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCC
Confidence 344458999999999999999999999999 543 233332 2689999999999999999999999
Q ss_pred CcccccCeEeEEEecCCCCC
Q 020844 216 QSSYLFGKQMKCSWGSKPTP 235 (320)
Q Consensus 216 ~~~~~~g~~l~v~~a~~~~~ 235 (320)
.++|+.|+|+|++++.+
T Consensus 82 ---~~~gr~i~V~~a~~~~p 98 (101)
T d2cpea1 82 ---DFQGSKLKVSLARKKPP 98 (101)
T ss_dssp ---EETTEECEEECSSCCCC
T ss_pred ---EECCEEEEEEEcCCCCC
Confidence 99999999999976543
No 124
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.72 E-value=1.8e-17 Score=119.72 Aligned_cols=77 Identities=23% Similarity=0.333 Sum_probs=68.6
Q ss_pred cceEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC------CcEEEEEeCCHHHHHHHHHHcC------CCCcccc
Q 020844 153 QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQMGN------TTQSSYL 220 (320)
Q Consensus 153 ~~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~------~g~afV~f~~~~~A~~A~~~l~------~~~~~~~ 220 (320)
..++|||+|||+++|+++|+++|++|| .|.++.+..+ +|||||+|.+.++|.+|++.+| +. .+
T Consensus 7 ~~~tlfV~nLp~~~te~~l~~~f~~~G--~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~---~~ 81 (98)
T d1x4ha1 7 EGKTVFIRNLSFDSEEEALGEVLQQFG--DLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGL---KL 81 (98)
T ss_dssp CCCCEEEESCCTTCCHHHHHHHHHTTS--CEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCE---ES
T ss_pred CCCEEEEcCCCCcCCHHHHHHHHhccc--cceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCc---EE
Confidence 347899999999999999999999999 8998888754 7899999999999999999887 45 68
Q ss_pred cCeEeEEEecCCCC
Q 020844 221 FGKQMKCSWGSKPT 234 (320)
Q Consensus 221 ~g~~l~v~~a~~~~ 234 (320)
.|+.|+|.|+.++.
T Consensus 82 ~gr~l~v~~a~~k~ 95 (98)
T d1x4ha1 82 DGRQLKVDLAVTRD 95 (98)
T ss_dssp SSCEEEEECCCCCC
T ss_pred CCEEEEEEECCCCC
Confidence 89999999987653
No 125
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.72 E-value=7.9e-18 Score=120.92 Aligned_cols=79 Identities=16% Similarity=0.259 Sum_probs=70.3
Q ss_pred CcceEEEECCCCccCcHHHHHHHHhccCCccEEEEEee-CCCcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEEec
Q 020844 152 PQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQ-RDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 230 (320)
Q Consensus 152 ~~~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~-~~~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~~a 230 (320)
...++|||+|||.++++++|+++|++|| .|..+... +++|||||+|.+.++|.+|++.||+. .+.|+.|+|.|+
T Consensus 14 ~~~~~l~V~nL~~~~te~~l~~~F~~~g--~v~~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~---~~~gr~i~V~~a 88 (96)
T d1fjca_ 14 RAARTLLAKNLSFNITEDELKEVFEDAL--EIRLVSQDGKSKGIAYIEFKSEADAEKNLEEKQGA---EIDGRSVSLYYT 88 (96)
T ss_dssp TGGGEEEEESCCSSCCHHHHHHHHCSEE--EECCEEETTEEEEEEEEEESSHHHHHHHHHHTTEE---EETTEEEEEEEC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcc--cceeeeecCccccEEEEEeCCHHHHHHHHHHcCCC---EECCEEEEEEEe
Confidence 3458999999999999999999999999 67666543 44899999999999999999999999 999999999999
Q ss_pred CCCCC
Q 020844 231 SKPTP 235 (320)
Q Consensus 231 ~~~~~ 235 (320)
.++..
T Consensus 89 ~~k~~ 93 (96)
T d1fjca_ 89 GEKGG 93 (96)
T ss_dssp SSSCC
T ss_pred CCCCC
Confidence 87654
No 126
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=2.4e-18 Score=125.72 Aligned_cols=76 Identities=26% Similarity=0.455 Sum_probs=69.5
Q ss_pred cceEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC------CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeE
Q 020844 153 QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMK 226 (320)
Q Consensus 153 ~~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~ 226 (320)
..++|||+|||.++++++|+++|++|| .|.++++.++ +|||||+|.+.++|.+|++.||+. .+.|+.|+
T Consensus 7 ~~rtl~V~nLp~~~te~~l~~~f~~~G--~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~---~~~g~~i~ 81 (104)
T d1p1ta_ 7 SLRSVFVGNIPYEATEEQLKDIFSEVG--PVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGR---EFSGRALR 81 (104)
T ss_dssp HHSCEEEESCCTTSCHHHHHHHHHTTS--CCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSB---SCSSSCBE
T ss_pred CCCEEEEECCCCcCCHHHHHHhhhccc--cccccccccccceeccCCceEEEECCHHHHHHHHHHcCCC---EECCEEEE
Confidence 347899999999999999999999999 8899988754 689999999999999999999999 99999999
Q ss_pred EEecCCC
Q 020844 227 CSWGSKP 233 (320)
Q Consensus 227 v~~a~~~ 233 (320)
|+|+.+.
T Consensus 82 V~~a~~~ 88 (104)
T d1p1ta_ 82 VDNAASE 88 (104)
T ss_dssp EEETTCT
T ss_pred EEECCCC
Confidence 9998654
No 127
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=1.4e-17 Score=118.43 Aligned_cols=77 Identities=22% Similarity=0.405 Sum_probs=69.6
Q ss_pred cceEEEECCCCccCcHHHHH----HHHhccCCccEEEEEeeCC---CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEe
Q 020844 153 QYTTVYVGNLAPEVTQLDLH----RHFHSLGAGVIEEVRVQRD---KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQM 225 (320)
Q Consensus 153 ~~~~l~V~nl~~~~t~~~l~----~~F~~~G~~~i~~~~~~~~---~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l 225 (320)
++++|||+|||.+++++||+ ++|++|| .|.++++.+. +|+|||+|.+.++|.+|++.+|+. .+.|+.|
T Consensus 2 P~~tl~V~nLp~~~t~~dl~~~l~~~f~~~G--~i~~i~~~~~~~~~g~afV~F~~~~~A~~A~~~~~~~---~~~g~~l 76 (91)
T d1nu4a_ 2 PNHTIYINNLNEKIKKDELKKSLHAIFSRFG--QILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGF---PFYDKPM 76 (91)
T ss_dssp CCSEEEEESCCTTSCHHHHHHHHHHHHGGGS--CEEEEECCHHHHHTTCEEEEESSHHHHHHHHHHHTTC---EETTEEC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhcccc--cccceEEeeeccCCCceEEEECCHHHHHHHHHHhCCC---EECCEEE
Confidence 34799999999999999886 4689999 9999998764 899999999999999999999999 9999999
Q ss_pred EEEecCCCC
Q 020844 226 KCSWGSKPT 234 (320)
Q Consensus 226 ~v~~a~~~~ 234 (320)
+|.|++++.
T Consensus 77 ~v~~ak~~~ 85 (91)
T d1nu4a_ 77 RIQYAKTDS 85 (91)
T ss_dssp EEEECSSCC
T ss_pred EEEEeCCCc
Confidence 999997653
No 128
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=4.9e-18 Score=119.94 Aligned_cols=75 Identities=19% Similarity=0.308 Sum_probs=67.5
Q ss_pred ceEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC-CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEEecCC
Q 020844 154 YTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD-KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSK 232 (320)
Q Consensus 154 ~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~-~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~~a~~ 232 (320)
.++|||+|||.++|+++|+++|++|| .|.++++.+. ++||||+|.+.++|++|+. ++. .++|+.|+|+++++
T Consensus 5 s~~lfV~nLp~~~te~~L~~~F~~~G--~v~~v~~~~~~~gfafV~f~~~~~a~~a~~--~~~---~i~g~~l~v~~a~~ 77 (88)
T d1wf0a_ 5 SSGVFVGRCTGDMTEDELREFFSQYG--DVMDVFIPKPFRAFAFVTFADDQIAQSLCG--EDL---IIKGISVHISNAEP 77 (88)
T ss_dssp CCEEEEESCCSSSCHHHHHHHSTTTS--CCCEEECCSSCCSCCEEECSCHHHHHHTTT--CEE---EETTEEEEEECCCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHcC--CceEEEEeeccCceEEEEECCHHHHHHHHh--CCC---EECCEEeEEEeCCC
Confidence 47899999999999999999999999 8999988765 8999999999999999985 677 89999999999976
Q ss_pred CCC
Q 020844 233 PTP 235 (320)
Q Consensus 233 ~~~ 235 (320)
+..
T Consensus 78 k~~ 80 (88)
T d1wf0a_ 78 KHN 80 (88)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 129
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.71 E-value=1.5e-17 Score=119.67 Aligned_cols=77 Identities=22% Similarity=0.268 Sum_probs=70.6
Q ss_pred CcceEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCCCcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEEecC
Q 020844 152 PQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGS 231 (320)
Q Consensus 152 ~~~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~~a~ 231 (320)
....+|||+|||+++++++|+++|++|| .|+++.+.+ +|+|||+|.+.++|.+|++.||+. .+.|+.|+|.|++
T Consensus 13 ~~~~~i~V~Nlp~~~~~~~L~~~F~~~G--~v~~~~i~~-~g~afV~f~~~~~a~~Ai~~lng~---~~~g~~i~v~~~~ 86 (98)
T d1wg4a_ 13 RSDFRVLVSGLPPSGSWQDLKDHMREAG--DVCYADVQK-DGMGMVEYLRKEDMEYALRKLDDT---KFRSHEGETSYIR 86 (98)
T ss_dssp SCSCEEEEECCCSSCCHHHHHHHHTTSS--CEEEEEEET-TTEEEEEESSHHHHHHHHHHHSSE---EEECTTSCEEEEE
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHhhc--ccccccccc-cceEEEEECCHHHHHHHHHHhCCC---EeCCeEEEEEEEe
Confidence 3447899999999999999999999999 999999876 699999999999999999999999 9999999999986
Q ss_pred CCC
Q 020844 232 KPT 234 (320)
Q Consensus 232 ~~~ 234 (320)
...
T Consensus 87 ~~~ 89 (98)
T d1wg4a_ 87 VYP 89 (98)
T ss_dssp EEC
T ss_pred cCC
Confidence 543
No 130
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.71 E-value=9e-18 Score=118.02 Aligned_cols=73 Identities=22% Similarity=0.365 Sum_probs=65.9
Q ss_pred eEEEECCCCccCc-HHHHHHHHhccCCccEEEEEeeCC-------CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeE
Q 020844 155 TTVYVGNLAPEVT-QLDLHRHFHSLGAGVIEEVRVQRD-------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMK 226 (320)
Q Consensus 155 ~~l~V~nl~~~~t-~~~l~~~F~~~G~~~i~~~~~~~~-------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~ 226 (320)
++|||+|||.+++ +++|+++|++|| .|+++++..+ +|+|||+|.+.++|.+|++ ||+. .++|+.|+
T Consensus 5 ~~l~V~nLp~~~t~ed~l~~~F~~~G--~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~-~n~~---~~~gr~l~ 78 (86)
T d2ghpa3 5 REIMIRNLSTELLDENLLRESFEGFG--SIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ-MNRS---LLGNREIS 78 (86)
T ss_dssp TEEEEEEECTTTCCHHHHHHHHGGGS--CEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG-GTTE---EETTEEEE
T ss_pred CEEEEECCCCCcccHHHHHHHHHhhh--hccceeeecccCCccccceeeeEEECCHHHHHHHHh-cCCC---EECCEEEE
Confidence 7899999999976 567999999999 9999998643 7899999999999999995 9999 99999999
Q ss_pred EEecCCC
Q 020844 227 CSWGSKP 233 (320)
Q Consensus 227 v~~a~~~ 233 (320)
|+|++++
T Consensus 79 V~~a~~k 85 (86)
T d2ghpa3 79 VSLADKK 85 (86)
T ss_dssp EEECCCC
T ss_pred EEEcCCC
Confidence 9998754
No 131
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=4.4e-18 Score=119.93 Aligned_cols=72 Identities=22% Similarity=0.296 Sum_probs=67.4
Q ss_pred EEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCCCcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEEecCCC
Q 020844 156 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGSKP 233 (320)
Q Consensus 156 ~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~~a~~~ 233 (320)
+|||+|||+++++++|+++|++|| .|.++.+.++ |+|||+|.+.++|.+|++.||+. .+.|+.|+|.+++..
T Consensus 2 rvfV~nlp~~~~~~~l~~~F~~~G--~v~~~~i~~~-g~afV~f~~~~~a~~Ai~~l~g~---~~~g~~i~v~~~~~~ 73 (87)
T d3begb1 2 RVVVSGLPPSGSWQDLKDHMREAG--DVCYADVYRD-GTGVVEFVRKEDMTYAVRKLDNT---KFRSHEGETAYIRVK 73 (87)
T ss_dssp CEEEEECCSSCCTTHHHHHHGGGS--CEEEEEECTT-SEEEEEESSHHHHHHHHHHHTTC---BCCCTTSCCCBCEEE
T ss_pred eEEEECCCCcCCHHHHHHHHhhhc--cccccccccc-ceeeEEeCCHHHHHHHHHHhCCC---EECCcEeEEeEEecC
Confidence 599999999999999999999999 9999998775 99999999999999999999999 999999999987543
No 132
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=2.9e-17 Score=116.15 Aligned_cols=73 Identities=26% Similarity=0.453 Sum_probs=66.1
Q ss_pred eEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC------CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEE
Q 020844 155 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 228 (320)
Q Consensus 155 ~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~ 228 (320)
++|||+|||+++|+++|+++|++|| .|.++++.++ +|||||+|.+.++|.+|++. .. .++|+.|.|+
T Consensus 9 ~~lfV~nLp~~~te~~l~~~F~~~G--~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~--~~---~l~Gr~i~v~ 81 (90)
T d2cqga1 9 SDLIVLGLPWKTTEQDLKEYFSTFG--EVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ--RH---MIDGRWCDCK 81 (90)
T ss_dssp CCEEEESCCSSCCHHHHHHHHGGGS--CEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHS--CE---EETTEEEEEE
T ss_pred CeEEEECCCCCCCHHHHHHHHHhhc--ccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhc--CC---ccCCEEeEEE
Confidence 6799999999999999999999999 9999998864 68999999999999999984 34 7899999999
Q ss_pred ecCCCC
Q 020844 229 WGSKPT 234 (320)
Q Consensus 229 ~a~~~~ 234 (320)
++.++.
T Consensus 82 ~a~~k~ 87 (90)
T d2cqga1 82 LPNSKQ 87 (90)
T ss_dssp CCCTTC
T ss_pred eCCCCC
Confidence 987654
No 133
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=2e-17 Score=119.98 Aligned_cols=75 Identities=25% Similarity=0.479 Sum_probs=68.3
Q ss_pred ceEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC------CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEE
Q 020844 154 YTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKC 227 (320)
Q Consensus 154 ~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v 227 (320)
.++|||+|||+++++++|+++|++|| .|.++.+.++ +|||||+|.+.++|.+|++ +++. .|.|+.|.|
T Consensus 20 ~~~lfVgnLp~~~te~~L~~~F~~~G--~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~-~~~~---~l~G~~i~V 93 (103)
T d1x4ba1 20 FRKLFIGGLSFETTEESLRNYYEQWG--KLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPH---SIDGRVVEP 93 (103)
T ss_dssp HTEEEEECCTTCCCHHHHHHHHTSSC--CCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHT-SCSE---EETTEEEEE
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHhhC--cccceeecccccCCCccCeEEEEECCHHHHHHHHH-hCCC---eECCEEEEE
Confidence 37899999999999999999999999 8999998754 7999999999999999985 6888 899999999
Q ss_pred EecCCCC
Q 020844 228 SWGSKPT 234 (320)
Q Consensus 228 ~~a~~~~ 234 (320)
+++.++.
T Consensus 94 ~~a~~ke 100 (103)
T d1x4ba1 94 KRAVARE 100 (103)
T ss_dssp ECCSSCC
T ss_pred EECcccC
Confidence 9987654
No 134
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=3.4e-17 Score=114.36 Aligned_cols=71 Identities=30% Similarity=0.534 Sum_probs=65.7
Q ss_pred eEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC------CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEE
Q 020844 155 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 228 (320)
Q Consensus 155 ~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~ 228 (320)
++|||+|||.++++++|+++|++|| .|.++++.++ +|||||+|.+.++|.+|++ +++. .+.|+.|+|+
T Consensus 7 ~~lfV~nlp~~~te~~l~~~F~~~G--~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~---~i~Gr~i~V~ 80 (84)
T d1l3ka1 7 RKLFIGGLSFETTDESLRSHFEQWG--TLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPH---KVDGRVVEPK 80 (84)
T ss_dssp GEEEEESCCTTCCHHHHHHHHGGGS--CEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSC---EETTEECEEE
T ss_pred cEEEEECCCCCCCHHHHHHHHHhhc--cccceeecccccCCCcccEEEEEEcCHHHHHHHHH-hCCC---EECCEEEEEE
Confidence 7899999999999999999999999 9999998754 7899999999999999997 5888 8999999999
Q ss_pred ecC
Q 020844 229 WGS 231 (320)
Q Consensus 229 ~a~ 231 (320)
.|.
T Consensus 81 ~A~ 83 (84)
T d1l3ka1 81 RAV 83 (84)
T ss_dssp ECC
T ss_pred eee
Confidence 874
No 135
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.70 E-value=4.9e-18 Score=116.60 Aligned_cols=70 Identities=27% Similarity=0.435 Sum_probs=64.7
Q ss_pred eEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC------CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEE
Q 020844 155 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 228 (320)
Q Consensus 155 ~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~ 228 (320)
|+|||+|||+++|+++|+++|++|| .|.++++.++ +|||||+|.+.++|.+|++ +|+. .++|+.|+|+
T Consensus 1 cklfV~nLp~~~te~~l~~~F~~~G--~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~---~i~Gr~i~V~ 74 (77)
T d1uawa_ 1 CKMFIGGLSWQTTQEGLREYFGQFG--EVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRH---ELDSKTIDPK 74 (77)
T ss_dssp CCEEEESCCSSCCSHHHHHHHTTTS--CCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTC---CCSSCCCEEE
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHhC--CcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCC---EECCeEEEEE
Confidence 4799999999999999999999999 8998888764 7999999999999999997 6999 9999999998
Q ss_pred ec
Q 020844 229 WG 230 (320)
Q Consensus 229 ~a 230 (320)
.|
T Consensus 75 ~A 76 (77)
T d1uawa_ 75 VA 76 (77)
T ss_dssp EC
T ss_pred EC
Confidence 76
No 136
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=2.1e-17 Score=112.95 Aligned_cols=69 Identities=23% Similarity=0.457 Sum_probs=63.6
Q ss_pred EEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC------CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEEe
Q 020844 156 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSW 229 (320)
Q Consensus 156 ~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~~ 229 (320)
+|||+|||+++++++|+++|++|| .|.++.+.++ +|||||+|.+.++|.+|++ +++. .++|+.|+|+.
T Consensus 1 klfV~nl~~~~te~~l~~~F~~~G--~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~---~l~Gr~i~V~r 74 (75)
T d1hd0a_ 1 KMFIGGLSWDTTKKDLKDYFSKFG--EVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEH---KLNGKVIDPKR 74 (75)
T ss_dssp CEEEECCCTTCCHHHHHHHHHTTS--CEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCC---CBTTBCCEECC
T ss_pred CEEEeCCCCcCCHHHHHHHHHhhc--cccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCC---EECCCEEEeeE
Confidence 499999999999999999999999 9999999864 7999999999999999997 6888 89999999975
Q ss_pred c
Q 020844 230 G 230 (320)
Q Consensus 230 a 230 (320)
|
T Consensus 75 A 75 (75)
T d1hd0a_ 75 A 75 (75)
T ss_dssp C
T ss_pred C
Confidence 4
No 137
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.70 E-value=2.5e-17 Score=118.79 Aligned_cols=77 Identities=16% Similarity=0.226 Sum_probs=70.5
Q ss_pred cceEEEECCCCcc-CcHHHHHHHHhccCCccEEEEEeeCCCcEEEEEeCCHHHHHHHHH--HcCCCCcccccCeEeEEEe
Q 020844 153 QYTTVYVGNLAPE-VTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQ--MGNTTQSSYLFGKQMKCSW 229 (320)
Q Consensus 153 ~~~~l~V~nl~~~-~t~~~l~~~F~~~G~~~i~~~~~~~~~g~afV~f~~~~~A~~A~~--~l~~~~~~~~~g~~l~v~~ 229 (320)
.+++|||+|||.+ +|+++|+++|++|| .|.++.+.+++|+|||+|.+.++|.+|++ .+++. .+.|+.|+|+|
T Consensus 17 ~~~~l~v~nLp~~~~te~~l~~~F~~fG--~V~~v~~~~~k~~afV~f~~~~~A~~Ai~~~~~~~~---~~~gr~l~V~~ 91 (99)
T d1x4fa1 17 LGRVIHLSNLPHSGYSDSAVLKLAEPYG--KIKNYILMRMKSQAFIEMETREDAMAMVDHCLKKAL---WFQGRCVKVDL 91 (99)
T ss_dssp CCCEEEEESCCCSSCCSHHHHTTTTTTS--CCSEEEEETTTTEEEEECSSHHHHHHHHHHHHHSCC---CSSSSCCEEEE
T ss_pred CCCEEEEeCCcCCccCHHHHHhhhcccc--ceeEEEEeecCCcEEEEecchHHHHHHHHHHhcCCc---eECCEEEEEEE
Confidence 4478999999985 89999999999999 99999999999999999999999999998 57888 89999999999
Q ss_pred cCCCC
Q 020844 230 GSKPT 234 (320)
Q Consensus 230 a~~~~ 234 (320)
++.+.
T Consensus 92 s~~~~ 96 (99)
T d1x4fa1 92 SEKYK 96 (99)
T ss_dssp ECSCS
T ss_pred cCCcc
Confidence 97543
No 138
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=2e-19 Score=127.90 Aligned_cols=77 Identities=13% Similarity=0.341 Sum_probs=68.3
Q ss_pred eeEEEcCCCccCcHHHHHHHhccCCCeeEEEEe-----ecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEE
Q 020844 34 FNIFVGDLSPEVTDATLFACFSVYPSCSDARVM-----WDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 108 (320)
Q Consensus 34 ~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~-----~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~ 108 (320)
|+|||+|||+++||++|+++|+.||.|..+.+. .+..++.++|||||+|.+.++|++|+ .|||..+.|++|+|.
T Consensus 2 RrlyVgNLp~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~-~l~g~~~~Gr~l~V~ 80 (90)
T d1u2fa_ 2 RRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAM-AFDGIIFQGQSLKIR 80 (90)
T ss_dssp CEEEECSCCTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGG-GGSSCCSSSSCCCCB
T ss_pred CEEEEcCCCCccchHHHHHHHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHH-hhCCcEECCEEEEEC
Confidence 689999999999999999999999988766553 34457889999999999999999999 599999999999997
Q ss_pred ecc
Q 020844 109 WAT 111 (320)
Q Consensus 109 ~a~ 111 (320)
.+.
T Consensus 81 r~k 83 (90)
T d1u2fa_ 81 RPH 83 (90)
T ss_dssp CTT
T ss_pred CCC
Confidence 543
No 139
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=4.1e-17 Score=117.14 Aligned_cols=80 Identities=20% Similarity=0.390 Sum_probs=68.0
Q ss_pred ceEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC-------CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeE
Q 020844 154 YTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD-------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMK 226 (320)
Q Consensus 154 ~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~-------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~ 226 (320)
+++|||+|||.++++++|+++|++||+ .|.++.+.++ +|||||+|.+.++|..|++.|++.. ..+.|+.|+
T Consensus 1 n~rLyV~nLp~~~te~~l~~~f~~~g~-~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~-~~~~g~~i~ 78 (96)
T d2disa1 1 NCRLFIGGIPKMKKREEILEEIAKVTE-GVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGR-IQLWGHQIA 78 (96)
T ss_dssp SEEEEEECCCTTSCHHHHHHHHHHHST-TEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCC-SCBTTBCCE
T ss_pred CCEEEEcCCCCcCCHHHHHHHHHHhCC-cceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCC-eEECCEEEE
Confidence 378999999999999999999999992 3889998653 6899999999999999999997541 056799999
Q ss_pred EEecCCCCC
Q 020844 227 CSWGSKPTP 235 (320)
Q Consensus 227 v~~a~~~~~ 235 (320)
|.||+++..
T Consensus 79 V~~A~p~~~ 87 (96)
T d2disa1 79 VDWAEPEID 87 (96)
T ss_dssp EEESCSSCS
T ss_pred EEEcCCCCC
Confidence 999976543
No 140
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=2.4e-17 Score=119.17 Aligned_cols=72 Identities=26% Similarity=0.423 Sum_probs=67.3
Q ss_pred ceEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC------CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEE
Q 020844 154 YTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKC 227 (320)
Q Consensus 154 ~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v 227 (320)
.++|||+|||.++++++|+++|+.|| .|.++++.++ +|||||+|.+.++|.+|++ ||+. .+.|+.|+|
T Consensus 18 ~~tifV~nL~~~~te~~l~~~F~~~G--~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~~-l~g~---~~~G~~l~V 91 (101)
T d2cq4a1 18 ARTVFCMQLAARIRPRDLEDFFSAVG--KVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG-LTGQ---RLLGVPIIV 91 (101)
T ss_dssp HTEEEEESCCTTCCHHHHHHHHTTTS--CEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHH-HTTE---EETTEEEEE
T ss_pred CCEEEEECCCCCCCHHHHHHHHcCCC--eEEEEEeeecCCCccccceEEEEECCHHHHHHHHH-HCCC---EECCEEEEE
Confidence 47899999999999999999999999 9999999865 7899999999999999995 9999 999999999
Q ss_pred EecC
Q 020844 228 SWGS 231 (320)
Q Consensus 228 ~~a~ 231 (320)
.++.
T Consensus 92 ~~a~ 95 (101)
T d2cq4a1 92 QASQ 95 (101)
T ss_dssp EEHH
T ss_pred EECC
Confidence 9874
No 141
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=1.7e-17 Score=120.74 Aligned_cols=78 Identities=26% Similarity=0.404 Sum_probs=68.7
Q ss_pred cceEEEECCCCccCcHHHHHHHHhccCCccEEEEEee------CCCcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeE
Q 020844 153 QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQ------RDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMK 226 (320)
Q Consensus 153 ~~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~------~~~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~ 226 (320)
++++|||+|||.++++++|+++|++|| .|..+.+. +.+|||||+|.+.++|.+|++.||+. .+.|+.|+
T Consensus 17 ps~tl~V~nLp~~~t~~~l~~~f~~~G--~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~---~~~g~~l~ 91 (102)
T d2cpxa1 17 PNKVLYLKNLSPRVTERDLVSLFARFQ--EKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGY---KLYGKILV 91 (102)
T ss_dssp CCSEEEEECCCTTCCHHHHHHHTHHHH--HSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTC---BCSSCBCE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHhhcc--ceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCC---EECCEEEE
Confidence 457899999999999999999999999 55555443 45899999999999999999999999 99999999
Q ss_pred EEecCCCCC
Q 020844 227 CSWGSKPTP 235 (320)
Q Consensus 227 v~~a~~~~~ 235 (320)
|+|++++..
T Consensus 92 V~~ak~k~~ 100 (102)
T d2cpxa1 92 IEFGKNKKQ 100 (102)
T ss_dssp EEECCCCSC
T ss_pred EEeCCCccc
Confidence 999987543
No 142
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=5.6e-17 Score=112.11 Aligned_cols=70 Identities=20% Similarity=0.429 Sum_probs=64.4
Q ss_pred eEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC------CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEE
Q 020844 155 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 228 (320)
Q Consensus 155 ~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~ 228 (320)
++|||+|||+++|+++|+++|++|| .|..+.+..+ +|+|||+|.+.++|.+|++ +|+. .|+|+.|+|+
T Consensus 3 r~lfV~nLp~~~te~~l~~~F~~~G--~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~-~~~~---~l~Gr~i~V~ 76 (79)
T d1l3ka2 3 KKIFVGGIKEDTEEHHLRDYFEQYG--KIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYH---TVNGHNCEVR 76 (79)
T ss_dssp SEEEEECCTTTCCHHHHHHHHTTTS--CEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-CSCC---EETTEECEEE
T ss_pred CEEEECCCCCcCCHHHHHHHHHHhc--cccccccccCCCCcccccEEEEEEcCHHHHHHHHH-hCCC---EECCEEEEEE
Confidence 7899999999999999999999999 8888888754 6899999999999999985 7999 9999999998
Q ss_pred ec
Q 020844 229 WG 230 (320)
Q Consensus 229 ~a 230 (320)
.|
T Consensus 77 ~A 78 (79)
T d1l3ka2 77 KA 78 (79)
T ss_dssp EC
T ss_pred EC
Confidence 75
No 143
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.68 E-value=7.1e-17 Score=113.93 Aligned_cols=76 Identities=17% Similarity=0.247 Sum_probs=69.8
Q ss_pred cceEEEECCCCcc-CcHHHHHHHHhccCCccEEEEEeeCCCcEEEEEeCCHHHHHHHHHHc--CCCCcccccCeEeEEEe
Q 020844 153 QYTTVYVGNLAPE-VTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMG--NTTQSSYLFGKQMKCSW 229 (320)
Q Consensus 153 ~~~~l~V~nl~~~-~t~~~l~~~F~~~G~~~i~~~~~~~~~g~afV~f~~~~~A~~A~~~l--~~~~~~~~~g~~l~v~~ 229 (320)
+.++|||+|||.. +|++||+++|++|| .|.++.+.+++++|||+|++.++|..|+..+ ++. .+.|++|+|+|
T Consensus 7 ~sr~v~v~nl~~~~~t~~eL~~lF~~fG--~I~~i~i~~~k~~afV~f~~~~~A~~A~~~l~~~~~---~~~gr~l~V~~ 81 (89)
T d1x4da1 7 TRRVVHIMDFQRGKNLRYQLLQLVEPFG--VISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPA---LVFGKPVRVHL 81 (89)
T ss_dssp CCCEEEEESCCCSSSHHHHHHTTTGGGS--CEEEEEECSSSSCEEEEESSHHHHHHHHHHHHHSCC---EETTEECEEEE
T ss_pred CCcEEEEECCCCCcCCHHHHHHHHHhhC--CeEEEEeeccceEEEEEEcchhhHHHHHHHHhhCCC---ccCCceEEEEE
Confidence 3478999999986 79999999999999 9999999999999999999999999999966 677 89999999999
Q ss_pred cCCC
Q 020844 230 GSKP 233 (320)
Q Consensus 230 a~~~ 233 (320)
+++.
T Consensus 82 s~~~ 85 (89)
T d1x4da1 82 SQKY 85 (89)
T ss_dssp ECCC
T ss_pred CCCc
Confidence 8754
No 144
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=6.2e-17 Score=118.78 Aligned_cols=77 Identities=16% Similarity=0.143 Sum_probs=68.9
Q ss_pred cceEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeC--CCcEEEEEeCCHHHHHHHHHHcCCCCcccc--cCeEeEEE
Q 020844 153 QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQR--DKGFGFVRYSTHAEAALAIQMGNTTQSSYL--FGKQMKCS 228 (320)
Q Consensus 153 ~~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~--~~g~afV~f~~~~~A~~A~~~l~~~~~~~~--~g~~l~v~ 228 (320)
+..+|||+|||+++|+++|+++|++|| .|..+.+.+ ++|+|||+|.+.++|..|+..||+. .+ .++.|+|.
T Consensus 6 ~~~~v~V~NL~~~vte~~L~~~F~~~G--~i~~~~i~~~~~~g~aFV~f~~~e~A~~Ai~~ln~~---~l~~~~~~l~v~ 80 (108)
T d2adba1 6 PVLRIIVENLFYPVTLDVLHQIFSKFG--TVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQ---NIYNACCTLRID 80 (108)
T ss_dssp CEEEEESCSCCSTTHHHHHHHHHTTTS--CEEEEEEEEETTEEEEEEEESCHHHHHHHHHHHHSC---CSSTTCCCCEEE
T ss_pred CeEEEEEeCcCCCCCHHHHHHHHccCC--cEEEEEEEeeCCCCeEEEEECCHHHHHHHHHHHCCC---EeccCCcEEEEE
Confidence 447899999999999999999999999 898888865 4789999999999999999999999 77 57899999
Q ss_pred ecCCCC
Q 020844 229 WGSKPT 234 (320)
Q Consensus 229 ~a~~~~ 234 (320)
|++...
T Consensus 81 ~s~~~~ 86 (108)
T d2adba1 81 FSKLTS 86 (108)
T ss_dssp ECSSCS
T ss_pred ecCCcc
Confidence 987643
No 145
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=1.7e-16 Score=115.64 Aligned_cols=76 Identities=26% Similarity=0.437 Sum_probs=64.8
Q ss_pred cceEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC-------CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEe
Q 020844 153 QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD-------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQM 225 (320)
Q Consensus 153 ~~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~-------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l 225 (320)
+.++|||+|||+++++++|+++|+.|| +.++++..+ +|||||+|.+.++|++|+ .||+. .+.|+.|
T Consensus 14 p~~~v~V~nLp~~~te~~l~~~f~~~g---~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~-~~~~~---~~~gr~l 86 (104)
T d1wi8a_ 14 PPYTAFLGNLPYDVTEESIKEFFRGLN---ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSAL-SLNEE---SLGNKRI 86 (104)
T ss_dssp SCEEEEEESCCSSCCHHHHHHHTTTSC---EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHH-GGGTC---EETTEEC
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHHhc---cccceeeeeeccCCCcceeeeEEECCHHHHHHHH-HcCCC---EECCEEE
Confidence 348999999999999999999999998 455555432 689999999999998766 69999 9999999
Q ss_pred EEEecCCCCC
Q 020844 226 KCSWGSKPTP 235 (320)
Q Consensus 226 ~v~~a~~~~~ 235 (320)
+|.|+.++..
T Consensus 87 ~V~~a~~~~~ 96 (104)
T d1wi8a_ 87 RVDVADQAQD 96 (104)
T ss_dssp EEEECCCCCC
T ss_pred EEEECCCCCC
Confidence 9999976544
No 146
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=2.8e-18 Score=124.73 Aligned_cols=76 Identities=18% Similarity=0.307 Sum_probs=72.1
Q ss_pred eeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEec
Q 020844 34 FNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 110 (320)
Q Consensus 34 ~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a 110 (320)
..++|++++.+++|++|+++|++||+|.+|+|+++ .++.++|||||+|.+.++|.+|++.|||+.+.||+|+|+++
T Consensus 28 ~~~~v~~~~~~~~ed~l~e~f~k~G~I~~v~I~~~-~~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v~~s 103 (104)
T d1jmta_ 28 SDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDN-LGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELS 103 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCS-SSSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEECCEEEC
T ss_pred chHHhhhhhhhhhHHHHHHHhccCCCEEEEEeecC-CCCCEeeEEEEEEechhHHHHHHHHHCCCEECCEEEEEEEC
Confidence 46889999999999999999999999999999988 48999999999999999999999999999999999999875
No 147
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=3.6e-17 Score=118.52 Aligned_cols=72 Identities=21% Similarity=0.362 Sum_probs=66.2
Q ss_pred eEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC-----CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEEe
Q 020844 155 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSW 229 (320)
Q Consensus 155 ~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~-----~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~~ 229 (320)
++|||+|||.++++++|+++|++|| .|..+.+.++ +|||||+|.+.++|.+|++.|||. .+.|+++.|.+
T Consensus 19 ~~lfV~nLp~~~te~~L~~~F~~~G--~i~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~---~i~gr~~~v~~ 93 (101)
T d1x5oa1 19 TNLYISNLPLSMDEQELENMLKPFG--QVISTRILRDSSGTSRGVGFARMESTEKCEAVIGHFNGK---FIKTPPGVSAP 93 (101)
T ss_dssp TEEEEESCCTTCCHHHHHHTTTTTS--CEEEEEEEECSSSCEEEEEEEEESCHHHHHHHHHHHBTC---CCCCCTTSCCC
T ss_pred CEEEEeCCCCCCCHHHHHHHHhhcc--cccceeeecccccccccceeEEeCCHHHHHHHHHHhCCC---EECCcCCccCC
Confidence 6899999999999999999999999 8888887754 689999999999999999999999 99999988876
Q ss_pred cC
Q 020844 230 GS 231 (320)
Q Consensus 230 a~ 231 (320)
++
T Consensus 94 ~~ 95 (101)
T d1x5oa1 94 TE 95 (101)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 148
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.68 E-value=3.2e-17 Score=112.18 Aligned_cols=69 Identities=22% Similarity=0.443 Sum_probs=63.3
Q ss_pred EEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC------CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEEe
Q 020844 156 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSW 229 (320)
Q Consensus 156 ~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~~ 229 (320)
+|||+|||.++|+++|+++|+.|| .+..+.+..+ +++|||+|.+.++|.+|++ +|+. .++|+.|+|++
T Consensus 1 rlfV~nLp~~~te~~l~~~F~~~G--~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~---~l~gr~i~V~~ 74 (75)
T d2msta_ 1 KIFVGGLSVNTTVEDVKHYFEQFG--KVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFH---EINNKMVECKK 74 (75)
T ss_dssp CEEEECCCSSCCHHHHHHHHHTTS--CCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSC---CBTTBCCEEEE
T ss_pred CEEEeCCCCCCCHHHHHHHHHHhC--CcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCC---EECCeEEEEEE
Confidence 499999999999999999999999 7888877644 7899999999999999996 9999 99999999997
Q ss_pred c
Q 020844 230 G 230 (320)
Q Consensus 230 a 230 (320)
|
T Consensus 75 A 75 (75)
T d2msta_ 75 A 75 (75)
T ss_dssp C
T ss_pred C
Confidence 5
No 149
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=2.6e-17 Score=112.15 Aligned_cols=69 Identities=16% Similarity=0.387 Sum_probs=63.0
Q ss_pred EEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC------CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEEe
Q 020844 156 TVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSW 229 (320)
Q Consensus 156 ~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~~ 229 (320)
+|||+|||+++|+++|+++|++|| .|.++++.++ +|||||+|.+.++|.+|++. ++. .++|+.|.|+.
T Consensus 1 klfVgnLp~~~te~~l~~~F~~~G--~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~~-~~~---~i~g~~i~vk~ 74 (75)
T d1x0fa1 1 KIFVGGLSPDTPEEKIREYFGGFG--EVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK-KYH---NVGLSKCEIKV 74 (75)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHS--CEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTTC-SSC---CBTTBCCEEEC
T ss_pred CEEEcCCCCCCCHHHHHHHHHHhC--CcccccccccccccccccEEEEEECCHHHHHHHHhh-CCC---EECCEEeEEEE
Confidence 599999999999999999999999 9999999865 79999999999999999975 666 79999999986
Q ss_pred c
Q 020844 230 G 230 (320)
Q Consensus 230 a 230 (320)
|
T Consensus 75 A 75 (75)
T d1x0fa1 75 A 75 (75)
T ss_dssp C
T ss_pred C
Confidence 5
No 150
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.68 E-value=9e-17 Score=113.92 Aligned_cols=74 Identities=19% Similarity=0.366 Sum_probs=65.2
Q ss_pred ceEEEECCCCccCcHHHHHHHHhccCCccEEEE-----EeeCCCcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEE
Q 020844 154 YTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEV-----RVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 228 (320)
Q Consensus 154 ~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~-----~~~~~~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~ 228 (320)
..+|||+|||+++++++|+++|+.|| .|.++ ...+++|||||+|.+.++|.+|++ ||+. .++|+.|+|.
T Consensus 13 ~~~ifV~nL~~~~te~~l~~~F~~~G--~i~~~~v~~~~~g~~kg~afv~F~~~e~a~~Al~-~~g~---~~~g~~i~V~ 86 (91)
T d1fjeb1 13 PFNLFIGNLNPNKSVAELKVAISELF--AKNDLAVVDVRTGTNRKFGYVDFESAEDLEKALE-LTGL---KVFGNEIKLE 86 (91)
T ss_dssp SEEEEEECCCTTSCHHHHHHHHHHHH--HHHTCCCCEEEEETTTTEEEEEESSHHHHHHHHH-GGGE---EETTEEEEEE
T ss_pred CcEEEEeCccCcchHHHHHHHHhcCC--cEEEeeeeecCCCCccEEeEEeeCCHHHHHHHHh-cCCc---EECCEEEEEE
Confidence 36899999999999999999999999 44444 445668999999999999999996 9999 9999999999
Q ss_pred ecCCC
Q 020844 229 WGSKP 233 (320)
Q Consensus 229 ~a~~~ 233 (320)
+++.+
T Consensus 87 ~ak~k 91 (91)
T d1fjeb1 87 KPKGR 91 (91)
T ss_dssp CCCCS
T ss_pred ecCCC
Confidence 98753
No 151
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.67 E-value=8.8e-17 Score=109.65 Aligned_cols=70 Identities=24% Similarity=0.205 Sum_probs=64.6
Q ss_pred eEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC----CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEEec
Q 020844 155 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD----KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 230 (320)
Q Consensus 155 ~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~----~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~~a 230 (320)
++|||+|||+++++++|+++|+.|| .|.++++.++ +++|||+|.+.++|.+|+ .+|+. .|+|+.|.|+.+
T Consensus 1 Ttv~V~nlp~~~t~~~l~~~F~~~G--~I~~v~~~~~~~~~~~~afV~F~~~~~a~~Al-~~~~~---~i~g~~i~V~~~ 74 (75)
T d2ghpa2 1 TTVLVKNLPKSYNQNKVYKYFKHCG--PIIHVDVADSLKKNFRFARIEFARYDGALAAI-TKTHK---VVGQNEIIVSHL 74 (75)
T ss_dssp CEEEEEEECTTCCHHHHHHHHGGGS--CEEEEEEEECTTSSSEEEEEEESSHHHHHHHH-TTTTC---EETTEECEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHhcCC--ceEEEEEEeeccccceEEEEEEcchHHhHHHH-HhcCc---EECCEEEEEEEC
Confidence 4799999999999999999999999 9999999866 579999999999999998 48999 999999999865
No 152
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.67 E-value=8.9e-17 Score=116.68 Aligned_cols=79 Identities=16% Similarity=0.102 Sum_probs=69.6
Q ss_pred CCceeEEEcCCCccC-cH----HHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeE
Q 020844 31 SGHFNIFVGDLSPEV-TD----ATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQI 105 (320)
Q Consensus 31 ~~~~~l~V~nLp~~~-te----~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l 105 (320)
..+.+|||+||+.++ ++ ++|+++|+.||.|.++++++ ++|||||+|.+.++|.+|++.|||..+.|++|
T Consensus 3 ~~~~~L~v~nl~~~v~~~d~~k~~l~~lF~~~G~i~~~~~~k------~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l 76 (104)
T d1weya_ 3 SGSSGLIACVANDDVFSESETRAKFESLFRTYDKDTTFQYFK------SFKRVRINFSNPLSAADARLRLHKTEFLGKEM 76 (104)
T ss_dssp SCCCEEEEECCCGGGGSTTTHHHHHHHHHHTTCSSCEEEEET------TTTEEEEECSSTTHHHHHHHTSTTSEETTEEC
T ss_pred CCCceEEEEeCCchhcCcHHHHHHHHHHhcccccceEEEEec------CCCEEEEEECCHHHHHHHHHHhcccccCCCEe
Confidence 456799999999986 33 56999999999999999974 45799999999999999999999999999999
Q ss_pred EEEeccCCCC
Q 020844 106 RCNWATKGAG 115 (320)
Q Consensus 106 ~v~~a~~~~~ 115 (320)
+|.|+.+...
T Consensus 77 ~v~~a~~~~~ 86 (104)
T d1weya_ 77 KLYFAQTLHI 86 (104)
T ss_dssp EEECCCCSSC
T ss_pred EEeecccCCC
Confidence 9999976543
No 153
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.66 E-value=3.1e-17 Score=115.92 Aligned_cols=69 Identities=25% Similarity=0.376 Sum_probs=64.1
Q ss_pred eEEEECCCCccCcHHHH---HHHHhccCCccEEEEEeeCC---------CcEEEEEeCCHHHHHHHHHHcCCCCcccccC
Q 020844 155 TTVYVGNLAPEVTQLDL---HRHFHSLGAGVIEEVRVQRD---------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFG 222 (320)
Q Consensus 155 ~~l~V~nl~~~~t~~~l---~~~F~~~G~~~i~~~~~~~~---------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g 222 (320)
++|||+|||+++++++| +++|++|| .|.++.+.++ +|+|||+|.+.++|.+|++.|||. .++|
T Consensus 9 n~vyV~nLp~~~t~~~l~~~~e~F~~~G--~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~---~~~g 83 (89)
T d2cpia1 9 NLVFVVGLSQRLADPEVLKRPEYFGKFG--KIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNV---VVDG 83 (89)
T ss_dssp SCEEEEEECTTTCCHHHHHSTTTTTTTS--CEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTE---EETT
T ss_pred CEEEEECCCCccCHHHHHHHHHHhcccC--CceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCC---EECC
Confidence 57999999999999999 67899999 9999999865 379999999999999999999999 9999
Q ss_pred eEeEEE
Q 020844 223 KQMKCS 228 (320)
Q Consensus 223 ~~l~v~ 228 (320)
+.|+|+
T Consensus 84 r~lkvS 89 (89)
T d2cpia1 84 RTLKAS 89 (89)
T ss_dssp EEEEEE
T ss_pred EEEEEC
Confidence 999985
No 154
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=1.3e-16 Score=111.62 Aligned_cols=71 Identities=15% Similarity=0.259 Sum_probs=65.9
Q ss_pred eEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC-----CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEEe
Q 020844 155 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSW 229 (320)
Q Consensus 155 ~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~-----~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~~ 229 (320)
++|||+|||.++|+++|+++|+.|| .|.++++.++ +|+|||+|.+.++|.+|++ +++. .+.|+.|+|.|
T Consensus 7 rtvfV~nlp~~~te~~l~~~F~~~G--~v~~v~l~~~~~~~~kG~afV~f~~~e~a~~al~-~~~~---~~~g~~l~v~~ 80 (85)
T d1zh5a2 7 RSVYIKGFPTDATLDDIKEWLEDKG--QVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVE-TPGQ---KYKETDLLILF 80 (85)
T ss_dssp TEEEEECCCTTCCHHHHHHHHTTSC--CEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHT-CCCC---EETTEECEEEE
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhc--ccccceeeeeccCCcceEEEEEEcCHHHHHHHHH-HCCC---EECCEEEEEEE
Confidence 7899999999999999999999999 8999998755 6899999999999999995 6999 99999999998
Q ss_pred cC
Q 020844 230 GS 231 (320)
Q Consensus 230 a~ 231 (320)
..
T Consensus 81 ~~ 82 (85)
T d1zh5a2 81 KD 82 (85)
T ss_dssp GG
T ss_pred cC
Confidence 64
No 155
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=1.2e-15 Score=110.95 Aligned_cols=75 Identities=15% Similarity=0.181 Sum_probs=64.7
Q ss_pred ceEEEECCCCccCcHHHHHHHHhccCCccEEEEEee-CC-----CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEE
Q 020844 154 YTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQ-RD-----KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKC 227 (320)
Q Consensus 154 ~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~-~~-----~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v 227 (320)
..+|||+|||+++|+++|+++|+.+| .+....+. .+ +|+|||+|.+.++|.+|++ +|+. .|+||.|+|
T Consensus 15 ~~~v~v~nLP~~~te~dI~~~F~~~g--~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~-~~~~---~i~gR~i~V 88 (104)
T d1wg5a_ 15 DGFVRLRGLPFGCSKEEIVQFFSGLE--IVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK-KHKE---RIGHRYIEI 88 (104)
T ss_dssp CCEEEEESCCTTCCHHHHHHHTTTCC--EEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHT-TTTC---CSSSSCCEE
T ss_pred CcEEEEeCCCCCCCHHHHHHHHHhcC--CceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHHh-hCCC---EEcceEEEE
Confidence 35799999999999999999999999 66664443 22 7999999999999999985 8999 999999999
Q ss_pred EecCCCC
Q 020844 228 SWGSKPT 234 (320)
Q Consensus 228 ~~a~~~~ 234 (320)
.+++...
T Consensus 89 ~~~~~~~ 95 (104)
T d1wg5a_ 89 FKSSRAE 95 (104)
T ss_dssp EEECTTT
T ss_pred EECCHHH
Confidence 9987654
No 156
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=5.1e-16 Score=112.53 Aligned_cols=76 Identities=18% Similarity=0.235 Sum_probs=64.4
Q ss_pred CcceEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC-----CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeE
Q 020844 152 PQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMK 226 (320)
Q Consensus 152 ~~~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~-----~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~ 226 (320)
....+|||+|||+++|+++|+++|+.||. + .+.+..+ +|||||+|.+.++|.+|++ +|+. .|+||.|+
T Consensus 13 ~~~~~v~v~nLp~~~te~dl~~~F~~~~~--~-~v~~~~~~~g~~~G~afVeF~~~~~a~~Al~-~~~~---~i~gR~I~ 85 (102)
T d1weza_ 13 TTGHCVHMRGLPYRATENDIYNFFSPLNP--M-RVHIEIGPDGRVTGEADVEFATHEDAVAAMA-KDKA---NMQHRYVE 85 (102)
T ss_dssp SSSCEEEEESCCTTCCHHHHHHSSCSCCC--S-EEEEEESSSSCEEEEEEEECSSSHHHHHHHT-TSSC---CSSSSCCE
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHhccCc--c-eeeeEEecCCcceEEEEEEECCHHHHHHHHH-cCCC---EECCEEEE
Confidence 34478999999999999999999999983 2 3444332 7899999999999999986 8999 99999999
Q ss_pred EEecCCCC
Q 020844 227 CSWGSKPT 234 (320)
Q Consensus 227 v~~a~~~~ 234 (320)
|.+++...
T Consensus 86 V~~s~~~~ 93 (102)
T d1weza_ 86 LFLNSTAG 93 (102)
T ss_dssp EEEECCCC
T ss_pred EEEcCCCC
Confidence 99987654
No 157
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.62 E-value=3.2e-16 Score=110.02 Aligned_cols=73 Identities=22% Similarity=0.212 Sum_probs=62.7
Q ss_pred cceEEEECCCCccCcHHHHHHHHhccCCccEEE-EEee-----CCCcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeE
Q 020844 153 QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEE-VRVQ-----RDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMK 226 (320)
Q Consensus 153 ~~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~-~~~~-----~~~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~ 226 (320)
..++|||+|||.++++++|+++|+.|| .+.. +.+. +.+|+|||+|.+.++|.+|++.||+. .++|++|+
T Consensus 8 ~~~~l~v~nLp~~~~~~di~~~F~~~~--~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~---~l~gr~i~ 82 (86)
T d2cqpa1 8 GPTIIKVQNMPFTVSIDEILDFFYGYQ--VIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDR---PIGSRKVK 82 (86)
T ss_dssp SSEEEEEESCCTTCCHHHHHHHTTTSC--CCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTC---EETTEECE
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhhcc--cceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCC---EECCEEEE
Confidence 347899999999999999999999999 4433 2222 22789999999999999999999999 99999999
Q ss_pred EEec
Q 020844 227 CSWG 230 (320)
Q Consensus 227 v~~a 230 (320)
|+++
T Consensus 83 v~l~ 86 (86)
T d2cqpa1 83 LVLG 86 (86)
T ss_dssp EEES
T ss_pred EEEC
Confidence 9875
No 158
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=1e-16 Score=108.66 Aligned_cols=65 Identities=26% Similarity=0.433 Sum_probs=60.5
Q ss_pred EEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC------CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeE
Q 020844 157 VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMK 226 (320)
Q Consensus 157 l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~ 226 (320)
|||+|||.++|+++|+++|++|| .|..+++.++ +|+|||+|.+.++|.+|++.|||. .+.|+.|+
T Consensus 1 lyV~nLp~~~te~~l~~~F~~~G--~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~---~~~Gr~~k 71 (72)
T d1x4ea1 1 LYIRGLQPGTTDQDLVKLCQPYG--KIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKAS---GVQAQMAK 71 (72)
T ss_dssp EEEESCCTTCCHHHHHTTSTTTS--CEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHH---TCCEESCC
T ss_pred CEEeCCCCcCCHHHHHHHHhhhc--cccccccccccccccccceeEEEECCHHHHHHHHHHhCCC---EECCEECc
Confidence 79999999999999999999999 8999888754 799999999999999999999999 99998764
No 159
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=1.5e-15 Score=109.51 Aligned_cols=66 Identities=15% Similarity=0.249 Sum_probs=59.0
Q ss_pred CCCCceeEEEcC--CCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCee
Q 020844 29 DTSGHFNIFVGD--LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 100 (320)
Q Consensus 29 ~~~~~~~l~V~n--Lp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~ 100 (320)
.+.+.++|+|.| ||.++||++|+++|++||.|.+++++++ +|||||+|.+.++|.+|++.|||..+
T Consensus 14 ~~~pt~~l~V~ng~L~~~vte~~L~~~F~~~G~i~~i~~~~~------k~~aFV~f~~~e~A~~A~~~lng~~i 81 (101)
T d2cq2a1 14 VSYATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMPPN------KPYSFARYRTTEESKRAYVTLNGKEV 81 (101)
T ss_dssp CSSCCSEEEEETCTGGGTCCHHHHHHHHHHHSCEEEEECCTT------CSCEEEEESSHHHHHHHHHHTTTCEE
T ss_pred CCCCCceEEEECCCCCCCCCHHHHHHHHHhhCcccEEeeccC------ccEEEEEECCHHHHHHHHHHhCCCCC
Confidence 345677889955 9999999999999999999999988765 46999999999999999999999977
No 160
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=6.2e-15 Score=105.86 Aligned_cols=82 Identities=20% Similarity=0.302 Sum_probs=70.8
Q ss_pred CCCCceeEEEcCC--CccC---------cHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCC
Q 020844 29 DTSGHFNIFVGDL--SPEV---------TDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTG 97 (320)
Q Consensus 29 ~~~~~~~l~V~nL--p~~~---------te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~ 97 (320)
....+++|+|+|| |.++ .++||++.|++||.|.++++..+ ..+|||||+|.+.++|.+|+..|||
T Consensus 4 ~~~~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~~~G~V~~v~~~~~----~~~G~~fV~f~~~e~A~~A~~~lng 79 (99)
T d2dita1 4 RMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDR----HPDGVASVSFRDPEEADYCIQTLDG 79 (99)
T ss_dssp CCCSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETT----CTTCEEEEECSCHHHHHHHHHHSTT
T ss_pred CCCCccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhcCcccEEEEeccCC----CCccEEEEEECCHHHHHHHHHHhCC
Confidence 3456889999999 6543 23689999999999999998654 4679999999999999999999999
Q ss_pred CeeCCeeEEEEeccCCC
Q 020844 98 KWLGSRQIRCNWATKGA 114 (320)
Q Consensus 98 ~~~~g~~l~v~~a~~~~ 114 (320)
..+.||+|.|.+.+++.
T Consensus 80 ~~~~gr~i~v~~~~g~~ 96 (99)
T d2dita1 80 RWFGGRQITAQAWDGTT 96 (99)
T ss_dssp CEETTEECEEEECCSCC
T ss_pred cEECCEEEEEEEeCCcC
Confidence 99999999999987654
No 161
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=4.2e-15 Score=107.15 Aligned_cols=63 Identities=22% Similarity=0.330 Sum_probs=58.7
Q ss_pred cceEEEE--CCCCccCcHHHHHHHHhccCCccEEEEEeeCCCcEEEEEeCCHHHHHHHHHHcCCCCcccc
Q 020844 153 QYTTVYV--GNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYL 220 (320)
Q Consensus 153 ~~~~l~V--~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~~g~afV~f~~~~~A~~A~~~l~~~~~~~~ 220 (320)
+.++||| +|||.++|+++|+++|++|| .|+.+.+.+++++|||+|.+.++|..|+..|||+ .+
T Consensus 17 pt~~l~V~ng~L~~~vte~~L~~~F~~~G--~i~~i~~~~~k~~aFV~f~~~e~A~~A~~~lng~---~i 81 (101)
T d2cq2a1 17 ATQSLVVANGGLGNGVSRNQLLPVLEKCG--LVDALLMPPNKPYSFARYRTTEESKRAYVTLNGK---EV 81 (101)
T ss_dssp CCSEEEEETCTGGGTCCHHHHHHHHHHHS--CEEEEECCTTCSCEEEEESSHHHHHHHHHHTTTC---EE
T ss_pred CCceEEEECCCCCCCCCHHHHHHHHHhhC--cccEEeeccCccEEEEEECCHHHHHHHHHHhCCC---CC
Confidence 3467888 45999999999999999999 9999999999999999999999999999999999 66
No 162
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=3.4e-15 Score=110.05 Aligned_cols=78 Identities=19% Similarity=0.259 Sum_probs=67.3
Q ss_pred CCCCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCH-HHHHHHHHHhCCCeeCCeeEEE
Q 020844 29 DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQ-QDAQSAINDLTGKWLGSRQIRC 107 (320)
Q Consensus 29 ~~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~-~~A~~A~~~l~~~~~~g~~l~v 107 (320)
.+.....+||+|||.++||++|+++|++||+|.+|.|+++ +|||||.|.+. ++|..|+..+++..+.++.+.|
T Consensus 7 ~~~g~~~~fvgnL~~~~tee~Lk~~F~~fG~V~~v~i~~~------kg~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v 80 (113)
T d1owxa_ 7 EKIGCLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRG------AKEGIILFKEKAKEALGKAKDANNGNLQLRNKEV 80 (113)
T ss_dssp CCCCCEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTT------CSEEEEEESSCHHHHHHHHHHTTTSCBCTTSSSE
T ss_pred CCCCCeEEEECCCCCCCCHHHHHHHHHhcCChheEEEecC------CceEEEEecCcHHHHHHHHHHhcCCceecCceEE
Confidence 4455667899999999999999999999999999999854 58999999995 7899999999999888777777
Q ss_pred EeccC
Q 020844 108 NWATK 112 (320)
Q Consensus 108 ~~a~~ 112 (320)
.+...
T Consensus 81 ~~~~~ 85 (113)
T d1owxa_ 81 TWEVL 85 (113)
T ss_dssp EEEEC
T ss_pred EEeec
Confidence 76543
No 163
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=3.6e-16 Score=110.72 Aligned_cols=74 Identities=20% Similarity=0.343 Sum_probs=62.6
Q ss_pred eEEEECCCCccCcHHHHHHHHhccCCc---------cEEEEEeeCCCcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEe
Q 020844 155 TTVYVGNLAPEVTQLDLHRHFHSLGAG---------VIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQM 225 (320)
Q Consensus 155 ~~l~V~nl~~~~t~~~l~~~F~~~G~~---------~i~~~~~~~~~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l 225 (320)
++|||+|||.++|+++|+++|+.||.. .+.+....+++|||||+|.+.++|.+|++ ||+. .+.|+.|
T Consensus 2 RrlyVgNLp~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~~-l~g~---~~~Gr~l 77 (90)
T d1u2fa_ 2 RRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMA-FDGI---IFQGQSL 77 (90)
T ss_dssp CEEEECSCCTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGGG-GSSC---CSSSSCC
T ss_pred CEEEEcCCCCccchHHHHHHHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHHh-hCCc---EECCEEE
Confidence 689999999999999999999999821 13344445668999999999999999985 9999 9999999
Q ss_pred EEEecCC
Q 020844 226 KCSWGSK 232 (320)
Q Consensus 226 ~v~~a~~ 232 (320)
+|+.++.
T Consensus 78 ~V~r~k~ 84 (90)
T d1u2fa_ 78 KIRRPHD 84 (90)
T ss_dssp CCBCTTC
T ss_pred EECCCCC
Confidence 9986543
No 164
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=3.1e-15 Score=108.63 Aligned_cols=71 Identities=17% Similarity=0.217 Sum_probs=61.9
Q ss_pred eEEEECCCCccCcHHHHHHHHhccCCccEEE-EEeeC-----CCcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEE
Q 020844 155 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEE-VRVQR-----DKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCS 228 (320)
Q Consensus 155 ~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~-~~~~~-----~~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~ 228 (320)
.+|||+|||+++|+++|+++|+.|| .+.. +.+.. .+|+|||+|.+.++|.+|++ +|+. .|+|+.|.|.
T Consensus 9 ~~v~v~nLp~~~t~~~l~~~F~~~g--~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al~-~n~~---~i~gr~i~V~ 82 (103)
T d2cpya1 9 VCAHITNIPFSITKMDVLQFLEGIP--VDENAVHVLVDNNGQGLGQALVQFKNEDDARKSER-LHRK---KLNGREAFVH 82 (103)
T ss_dssp CEEEEESCCTTSCHHHHHHHTTTSC--CCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGG-GCSE---EETTEEEEEE
T ss_pred eEEEEeCCCCCCCHHHHhhhhcccc--eEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHHh-cCCC---eECCcEEEEE
Confidence 6799999999999999999999999 5544 33332 38999999999999999995 8999 9999999999
Q ss_pred ecC
Q 020844 229 WGS 231 (320)
Q Consensus 229 ~a~ 231 (320)
++.
T Consensus 83 ~~~ 85 (103)
T d2cpya1 83 VVT 85 (103)
T ss_dssp EEC
T ss_pred ECC
Confidence 864
No 165
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=1.5e-14 Score=106.52 Aligned_cols=73 Identities=21% Similarity=0.282 Sum_probs=65.7
Q ss_pred ceEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCCCcEEEEEeCCH-HHHHHHHHHcCCCCcccccCeEeEEEecC
Q 020844 154 YTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTH-AEAALAIQMGNTTQSSYLFGKQMKCSWGS 231 (320)
Q Consensus 154 ~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~~g~afV~f~~~-~~A~~A~~~l~~~~~~~~~g~~l~v~~a~ 231 (320)
+..+||+|||.++|+++|+++|++|| .|.+|.+.+++|+|||+|.+. ++|..|+..+|+. .+.++.+.|.|..
T Consensus 11 ~~~~fvgnL~~~~tee~Lk~~F~~fG--~V~~v~i~~~kg~gfV~F~~~~~~A~~a~~~~~~~---~l~~~~~~v~~~~ 84 (113)
T d1owxa_ 11 CLLKFSGDLDDQTCREDLHILFSNHG--EIKWIDFVRGAKEGIILFKEKAKEALGKAKDANNG---NLQLRNKEVTWEV 84 (113)
T ss_dssp CEEEEEESCCSSCCHHHHHHHTCSSC--CEEEEECCTTCSEEEEEESSCHHHHHHHHHHTTTS---CBCTTSSSEEEEE
T ss_pred CeEEEECCCCCCCCHHHHHHHHHhcC--ChheEEEecCCceEEEEecCcHHHHHHHHHHhcCC---ceecCceEEEEee
Confidence 35679999999999999999999999 999999999999999999984 7899999999999 7887777777653
No 166
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=2.4e-14 Score=103.83 Aligned_cols=82 Identities=17% Similarity=0.148 Sum_probs=70.1
Q ss_pred CCceeEEEcCC--Ccc--------CcHHHHHHHhccCCCeeEEEEeecCCC--CCccceEEEEecCHHHHHHHHHHhCCC
Q 020844 31 SGHFNIFVGDL--SPE--------VTDATLFACFSVYPSCSDARVMWDQKT--GRSRGFGFVSFRNQQDAQSAINDLTGK 98 (320)
Q Consensus 31 ~~~~~l~V~nL--p~~--------~te~~l~~~F~~~G~i~~v~i~~~~~~--g~~~G~afV~f~~~~~A~~A~~~l~~~ 98 (320)
.+++.|.|+|| |.+ ...+||++.|++||.|.+|.|+++..+ ....|++||+|.+.++|.+|+..|||.
T Consensus 2 ~Ps~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr 81 (104)
T d1o0pa_ 2 HPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGR 81 (104)
T ss_dssp CCCSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHTTTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSC
T ss_pred CCCcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhcccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCC
Confidence 35788999999 443 345679999999999999999887644 345689999999999999999999999
Q ss_pred eeCCeeEEEEeccC
Q 020844 99 WLGSRQIRCNWATK 112 (320)
Q Consensus 99 ~~~g~~l~v~~a~~ 112 (320)
.+.||.|.|.+...
T Consensus 82 ~f~gR~v~v~f~~~ 95 (104)
T d1o0pa_ 82 KFANRVVVTKYCDP 95 (104)
T ss_dssp CSSSSCCEEEEECH
T ss_pred EECCeEEEEEEcCH
Confidence 99999999999753
No 167
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.48 E-value=4.1e-14 Score=97.23 Aligned_cols=73 Identities=12% Similarity=0.147 Sum_probs=62.0
Q ss_pred CceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCee-EEEEec
Q 020844 32 GHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQ-IRCNWA 110 (320)
Q Consensus 32 ~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~-l~v~~a 110 (320)
+++.|+|.++|++++++.| ++|++||+|.++++.+ ++|||||+|.+.++|++|+ .+||..+.|+. |.|..+
T Consensus 3 ~~~wV~V~G~p~~~~~~il-~~F~~~G~I~~~~~~~------~~~~~fV~f~~~~~A~~Al-~~nG~~~~g~~~vgV~~~ 74 (81)
T d1wwha1 3 DDTWVTVFGFPQASASYIL-LQFAQYGNILKHVMSN------TGNWMHIRYQSKLQARKAL-SKDGRIFGESIMIGVKPC 74 (81)
T ss_dssp GGGEEEEECCCGGGHHHHH-HHHHTTSCEEEEEECS------SSSEEEEEESSHHHHHHHH-TTTTCEETTTEECEEEEC
T ss_pred cccEEEEECCChHHHHHHH-HHHHhhhhhheEEecC------CCCEEEEEEcccHHHHHHH-hcCCCeECCcEEEEEEeC
Confidence 3568999999999997655 5799999999998753 4689999999999999999 59999999985 568776
Q ss_pred cC
Q 020844 111 TK 112 (320)
Q Consensus 111 ~~ 112 (320)
..
T Consensus 75 ~~ 76 (81)
T d1wwha1 75 ID 76 (81)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 168
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.47 E-value=8.9e-14 Score=95.49 Aligned_cols=71 Identities=15% Similarity=0.104 Sum_probs=62.8
Q ss_pred eEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCCCcEEEEEeCCHHHHHHHHHHcCCCCcccccCe-EeEEEecCC
Q 020844 155 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGK-QMKCSWGSK 232 (320)
Q Consensus 155 ~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~-~l~v~~a~~ 232 (320)
+.|+|+++|++.+++.| ++|++|| .|.++++.++++||||+|.+.++|.+|++ +||. .++|+ .|.|..+.+
T Consensus 5 ~wV~V~G~p~~~~~~il-~~F~~~G--~I~~~~~~~~~~~~fV~f~~~~~A~~Al~-~nG~---~~~g~~~vgV~~~~~ 76 (81)
T d1wwha1 5 TWVTVFGFPQASASYIL-LQFAQYG--NILKHVMSNTGNWMHIRYQSKLQARKALS-KDGR---IFGESIMIGVKPCID 76 (81)
T ss_dssp GEEEEECCCGGGHHHHH-HHHHTTS--CEEEEEECSSSSEEEEEESSHHHHHHHHT-TTTC---EETTTEECEEEECCC
T ss_pred cEEEEECCChHHHHHHH-HHHHhhh--hhheEEecCCCCEEEEEEcccHHHHHHHh-cCCC---eECCcEEEEEEeCCC
Confidence 67999999999987655 5799999 99999999999999999999999999995 8999 99997 456876544
No 169
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45 E-value=7.5e-15 Score=106.30 Aligned_cols=71 Identities=17% Similarity=0.218 Sum_probs=66.2
Q ss_pred eEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC-----CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEEe
Q 020844 155 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSW 229 (320)
Q Consensus 155 ~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~-----~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~~ 229 (320)
+.++|.++..++++++|+++|++|| .|.++++.++ +|+|||+|.+.++|.+|++.|||+ +++|++|+|.|
T Consensus 28 ~~~~v~~~~~~~~ed~l~e~f~k~G--~I~~v~I~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lng~---~~~gr~i~v~~ 102 (104)
T d1jmta_ 28 SDVEMQEHYDEFFEEVFTEMEEKYG--EVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR---WFNGQPIHAEL 102 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTC--CEEEEEECCSSSSSSEEEEEEEESCHHHHHHHHHHHTTC---EETTEECCEEE
T ss_pred chHHhhhhhhhhhHHHHHHHhccCC--CEEEEEeecCCCCCEeeEEEEEEechhHHHHHHHHHCCC---EECCEEEEEEE
Confidence 4588889999999999999999999 9999999765 799999999999999999999999 99999999998
Q ss_pred c
Q 020844 230 G 230 (320)
Q Consensus 230 a 230 (320)
.
T Consensus 103 s 103 (104)
T d1jmta_ 103 S 103 (104)
T ss_dssp C
T ss_pred C
Confidence 5
No 170
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45 E-value=1.9e-13 Score=97.99 Aligned_cols=77 Identities=18% Similarity=0.238 Sum_probs=66.0
Q ss_pred CcceEEEECCC--CccCc---------HHHHHHHHhccCCccEEEEEeeCC--CcEEEEEeCCHHHHHHHHHHcCCCCcc
Q 020844 152 PQYTTVYVGNL--APEVT---------QLDLHRHFHSLGAGVIEEVRVQRD--KGFGFVRYSTHAEAALAIQMGNTTQSS 218 (320)
Q Consensus 152 ~~~~~l~V~nl--~~~~t---------~~~l~~~F~~~G~~~i~~~~~~~~--~g~afV~f~~~~~A~~A~~~l~~~~~~ 218 (320)
...++|+|.|| +.++. +++|++.|++|| .|..+.+.++ +|++||+|.+.++|.+|+..|||.
T Consensus 6 ~~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~~~G--~V~~v~~~~~~~~G~~fV~f~~~e~A~~A~~~lng~--- 80 (99)
T d2dita1 6 RHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFG--QIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGR--- 80 (99)
T ss_dssp CSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTS--CCSEEEEETTCTTCEEEEECSCHHHHHHHHHHSTTC---
T ss_pred CCccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhcCcc--cEEEEeccCCCCccEEEEEECCHHHHHHHHHHhCCc---
Confidence 34489999999 55432 368999999999 8888887765 799999999999999999999999
Q ss_pred cccCeEeEEEecCCC
Q 020844 219 YLFGKQMKCSWGSKP 233 (320)
Q Consensus 219 ~~~g~~l~v~~a~~~ 233 (320)
+++|+.|+|.|...+
T Consensus 81 ~~~gr~i~v~~~~g~ 95 (99)
T d2dita1 81 WFGGRQITAQAWDGT 95 (99)
T ss_dssp EETTEECEEEECCSC
T ss_pred EECCEEEEEEEeCCc
Confidence 999999999997543
No 171
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45 E-value=2.1e-14 Score=105.61 Aligned_cols=72 Identities=19% Similarity=0.287 Sum_probs=60.5
Q ss_pred ceEEEECCCCccCcHHHHHHHHhccCCccEEEE--Eee----CCCcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEE
Q 020844 154 YTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEV--RVQ----RDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKC 227 (320)
Q Consensus 154 ~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~--~~~----~~~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v 227 (320)
..+|||+|||+++|+++|+++|+.|| .+..+ ... +.+|+|||+|.+.++|.+|+. +|+. .|+|+.|.|
T Consensus 18 ~~~i~v~nLp~~~t~~di~~~F~~~g--~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al~-~~~~---~i~gR~i~V 91 (112)
T d1wela1 18 GFCVYLKGLPFEAENKHVIDFFKKLD--IVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC-RHKQ---YMGNRFIQV 91 (112)
T ss_dssp CCEEEEECCCTTCCHHHHHHHSCSSC--BCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHT-SCSB---CSTTSCBEE
T ss_pred CeEEEEecCCCcCcHHHHhhHHhhcc--ccccceeeecCcccceeeEEEEEECCHHHHHHHHH-cCCC---cCCCEEEEE
Confidence 36899999999999999999999999 44322 111 227899999999999999995 8999 999999999
Q ss_pred EecC
Q 020844 228 SWGS 231 (320)
Q Consensus 228 ~~a~ 231 (320)
..+.
T Consensus 92 ~~~~ 95 (112)
T d1wela1 92 HPIT 95 (112)
T ss_dssp EEEC
T ss_pred EEcC
Confidence 8763
No 172
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.35 E-value=9.1e-13 Score=95.26 Aligned_cols=75 Identities=13% Similarity=0.200 Sum_probs=65.0
Q ss_pred CcceEEEECCC--CccC--------cHHHHHHHHhccCCccEEEEEeeCC--------CcEEEEEeCCHHHHHHHHHHcC
Q 020844 152 PQYTTVYVGNL--APEV--------TQLDLHRHFHSLGAGVIEEVRVQRD--------KGFGFVRYSTHAEAALAIQMGN 213 (320)
Q Consensus 152 ~~~~~l~V~nl--~~~~--------t~~~l~~~F~~~G~~~i~~~~~~~~--------~g~afV~f~~~~~A~~A~~~l~ 213 (320)
+++++|.|.|+ +.++ ..+||++.|++|| .|.++.+.++ .|++||+|.+.++|.+|+..||
T Consensus 2 ~Ps~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~k~G--~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~ 79 (104)
T d1o0pa_ 2 HPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYG--LVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLT 79 (104)
T ss_dssp CCCSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHTTTS--CEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHS
T ss_pred CCCcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhcccC--ceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHC
Confidence 34588999999 4443 3467999999999 9999999764 4899999999999999999999
Q ss_pred CCCcccccCeEeEEEecC
Q 020844 214 TTQSSYLFGKQMKCSWGS 231 (320)
Q Consensus 214 ~~~~~~~~g~~l~v~~a~ 231 (320)
|+ +++||.|.|.|..
T Consensus 80 Gr---~f~gR~v~v~f~~ 94 (104)
T d1o0pa_ 80 GR---KFANRVVVTKYCD 94 (104)
T ss_dssp SC---CSSSSCCEEEEEC
T ss_pred CC---EECCeEEEEEEcC
Confidence 99 9999999999964
No 173
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.94 E-value=3.5e-05 Score=52.29 Aligned_cols=67 Identities=15% Similarity=0.220 Sum_probs=56.9
Q ss_pred eeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCC--ccceEEEEecCHHHHHHHHHHhCCCee
Q 020844 34 FNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGR--SRGFGFVSFRNQQDAQSAINDLTGKWL 100 (320)
Q Consensus 34 ~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~--~~G~afV~f~~~~~A~~A~~~l~~~~~ 100 (320)
++|.||.||+++||+++.+.+...|++.......-+.+-. .-..|||.|.+.++.....+..+|..+
T Consensus 2 tKvVvRrLPP~Lte~~F~~~l~~~~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F 70 (91)
T d1uw4a_ 2 SKVVIRRLPPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVF 70 (91)
T ss_dssp CEEEEEEECTTCCHHHHHHHHCSCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEE
T ss_pred ceEEEecCCCCCCHHHHHHHhCCcCceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEE
Confidence 4799999999999999999999999998877776544322 224689999999999999999999987
No 174
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.69 E-value=8.2e-05 Score=47.02 Aligned_cols=59 Identities=17% Similarity=0.128 Sum_probs=52.2
Q ss_pred HHHHHHHHhccCCccEEEEEeeCC---CcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEEecC
Q 020844 168 QLDLHRHFHSLGAGVIEEVRVQRD---KGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWGS 231 (320)
Q Consensus 168 ~~~l~~~F~~~G~~~i~~~~~~~~---~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~~a~ 231 (320)
.+.|.+.|.++| .|..+.+... .-.|-|...+.++|..|++.||.. .+++++|.|+++.
T Consensus 10 qq~L~~~f~~h~--~V~sv~l~~~~dg~~~A~V~v~~~q~A~~~v~~LhR~---KiG~KRI~Vs~~~ 71 (73)
T d2dgxa1 10 QQLLQEAFARHG--KVKSVELSPHTDYQLKAVVQMENLQDAIGAVNSLHRY---KIGSKKILVSLAT 71 (73)
T ss_dssp HHHHHHHHHHHS--CEEEEEECSCCSTTCCEEEEESSHHHHHHHHHHHTTE---EETTEEEEEEECC
T ss_pred HHHHHHHHHhhe--eEEEEEEEeccCCcEEEEEEcCCHHHHHHHHHHHHHH---hcCCeEEEEEEec
Confidence 455778999999 9999998754 347999999999999999999999 9999999999975
No 175
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.63 E-value=0.00011 Score=46.40 Aligned_cols=61 Identities=25% Similarity=0.193 Sum_probs=51.7
Q ss_pred HHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEeccC
Q 020844 49 TLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 112 (320)
Q Consensus 49 ~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a~~ 112 (320)
.|.+.|.++|.|.++.+.... +|. -.|-|...+..+|..|+..|+...+++++|.|.++..
T Consensus 12 ~L~~~f~~h~~V~sv~l~~~~-dg~--~~A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~~~ 72 (73)
T d2dgxa1 12 LLQEAFARHGKVKSVELSPHT-DYQ--LKAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLATG 72 (73)
T ss_dssp HHHHHHHHHSCEEEEEECSCC-STT--CCEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECCC
T ss_pred HHHHHHHhheeEEEEEEEecc-CCc--EEEEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEecC
Confidence 355688999999999997552 343 3689999999999999999999999999999998753
No 176
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.51 E-value=0.00011 Score=48.84 Aligned_cols=53 Identities=21% Similarity=0.310 Sum_probs=47.8
Q ss_pred HHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCCeeCCeeEEEEec
Q 020844 49 TLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 110 (320)
Q Consensus 49 ~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~~~~g~~l~v~~a 110 (320)
+|.+.|..||+|.-++++.|. ..|+|.+-++|-+|+ .+++..+.|+.|.|...
T Consensus 40 ~Llq~l~~~GeViLvRFv~d~--------mwVTF~dG~SAL~al-~l~g~~v~G~~l~It~~ 92 (95)
T d1ufwa_ 40 ELMQTLGSYGTIVLVRINQGQ--------MLVTFADSHSALSVL-DVDGMKVKGRAVKISGP 92 (95)
T ss_dssp HHHHHHHHHSCCSEEEEETTE--------EEEECSCSHHHHHHH-HGGGSEETTEEEEEECC
T ss_pred HHHHHHhhCCeEEEEEEeCCe--------EEEEECCcHHHHHHh-ccCCeEEcceEEEEecC
Confidence 677889999999999999873 799999999999999 88999999999999743
No 177
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.25 E-value=0.00077 Score=45.44 Aligned_cols=71 Identities=10% Similarity=0.195 Sum_probs=57.6
Q ss_pred eEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC--------CcEEEEEeCCHHHHHHHHHHcCCCCcccccC----
Q 020844 155 TTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD--------KGFGFVRYSTHAEAALAIQMGNTTQSSYLFG---- 222 (320)
Q Consensus 155 ~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~--------~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g---- 222 (320)
++|.|+.||+.+|++++.+.++..| ++.......+ -..|+|.|.+.++...-.+.++|. .+-+
T Consensus 2 tKvVvRrLPP~Lte~~F~~~l~~~~--~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~---~F~D~~g~ 76 (91)
T d1uw4a_ 2 SKVVIRRLPPTLTKEQLQEHLQPMP--EHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGY---VFLDNKGQ 76 (91)
T ss_dssp CEEEEEEECTTCCHHHHHHHHCSCC--CEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTC---EEECTTCC
T ss_pred ceEEEecCCCCCCHHHHHHHhCCcC--ceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCc---EEEcCCCC
Confidence 5799999999999999999999888 7777666544 257999999999999999999998 6543
Q ss_pred -eEeEEEec
Q 020844 223 -KQMKCSWG 230 (320)
Q Consensus 223 -~~l~v~~a 230 (320)
.+-.|+||
T Consensus 77 ~~~a~VE~A 85 (91)
T d1uw4a_ 77 EYPAIVEFA 85 (91)
T ss_dssp EEECEEEEC
T ss_pred EeeeEEEEc
Confidence 23456665
No 178
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.13 E-value=0.00097 Score=44.26 Aligned_cols=54 Identities=20% Similarity=0.236 Sum_probs=48.0
Q ss_pred HHHHHHHhccCCccEEEEEeeCCCcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEEec
Q 020844 169 LDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 230 (320)
Q Consensus 169 ~~l~~~F~~~G~~~i~~~~~~~~~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~~a 230 (320)
.+|.+.|..|| +|.-+++..+ -..|+|.+-++|.+|++ +++. ++.|+.|+|...
T Consensus 39 ~~Llq~l~~~G--eViLvRFv~d--~mwVTF~dG~SAL~al~-l~g~---~v~G~~l~It~~ 92 (95)
T d1ufwa_ 39 TELMQTLGSYG--TIVLVRINQG--QMLVTFADSHSALSVLD-VDGM---KVKGRAVKISGP 92 (95)
T ss_dssp HHHHHHHHHHS--CCSEEEEETT--EEEEECSCSHHHHHHHH-GGGS---EETTEEEEEECC
T ss_pred HHHHHHHhhCC--eEEEEEEeCC--eEEEEECCcHHHHHHhc-cCCe---EEcceEEEEecC
Confidence 46889999999 8888898876 89999999999999986 6999 999999999853
No 179
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.78 E-value=0.0035 Score=42.22 Aligned_cols=61 Identities=18% Similarity=0.221 Sum_probs=49.3
Q ss_pred CcCCCCceeEEEcCCCccCcHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHh
Q 020844 27 REDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 95 (320)
Q Consensus 27 ~~~~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l 95 (320)
++.......||.-..|..+...||.++|++||.|. |..+-|. -|||...+.++|+.++..+
T Consensus 9 ~d~~p~RdHVf~~tFP~~Wk~~dI~~lFSpfG~V~-VswIddT-------Sa~V~L~~~e~~~~v~~~~ 69 (100)
T d1whva_ 9 PDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQ-ISWIDDT-------SAFVSLSQPEQVQIAVNTS 69 (100)
T ss_dssp SCCCCCCCSEEEEECCTTCCHHHHHHHHTTTCSCC-CEEEETT-------EEEEECSCHHHHHHHHHHH
T ss_pred CCCCCCcceeEEEeCCcccchhHHHHHhcCCCceE-EEEecCc-------eEEEEecCHHHHHHHHHHh
Confidence 33344455799999999999999999999999986 4444442 6999999999999998654
No 180
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.32 E-value=0.0076 Score=40.54 Aligned_cols=63 Identities=21% Similarity=0.284 Sum_probs=50.3
Q ss_pred CCCCCCcceEEEECCCCccCcHHHHHHHHhccCCccEEEEEeeCCCcEEEEEeCCHHHHHHHHHHcC
Q 020844 147 APENNPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGN 213 (320)
Q Consensus 147 ~~~~~~~~~~l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~~g~afV~f~~~~~A~~A~~~l~ 213 (320)
+++..+....+|.-..|..+...||.++|++||.+.|.-|. --.|||...+.++|..++..++
T Consensus 8 G~d~~p~RdHVf~~tFP~~Wk~~dI~~lFSpfG~V~VswId----dTSa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 8 GPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWID----DTSAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp CSCCCCCCCSEEEEECCTTCCHHHHHHHHTTTCSCCCEEEE----TTEEEEECSCHHHHHHHHHHHH
T ss_pred CCCCCCCcceeEEEeCCcccchhHHHHHhcCCCceEEEEec----CceEEEEecCHHHHHHHHHHhc
Confidence 34445555678888999999999999999999966666552 3489999999999999887654
No 181
>d1ueka2 d.58.26.5 (A:149-268) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]}
Probab=60.42 E-value=9.8 Score=25.61 Aligned_cols=45 Identities=13% Similarity=0.026 Sum_probs=35.4
Q ss_pred HHHHHHHHhccCCccEEEEEeeCCCcEEEEEeCCHHHHHHHHHHcCCC
Q 020844 168 QLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTT 215 (320)
Q Consensus 168 ~~~l~~~F~~~G~~~i~~~~~~~~~g~afV~f~~~~~A~~A~~~l~~~ 215 (320)
-.++++.+..+| . ..+.+.-+-..+|..|.+.++|.++.+.|...
T Consensus 65 l~~~~~~l~~~g--~-~~~~mSGSGst~F~l~~~~~~a~~~~~~l~~~ 109 (120)
T d1ueka2 65 LKEVRGRMRALG--L-RGVLMSGSGSAFFGLAEGPDHARRAAEALRAW 109 (120)
T ss_dssp HHHHHHHHHHTT--C-EEEEECTTSSCEEEECSSHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhh--h-hheeecCCCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 366777788887 3 33556655668999999999999999999876
No 182
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=60.06 E-value=7.6 Score=26.40 Aligned_cols=42 Identities=12% Similarity=0.113 Sum_probs=32.9
Q ss_pred HHHHHHHhccCCccEEEEEeeCCCcEEEEEeCCHHHHHHHHHHcCCC
Q 020844 169 LDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTT 215 (320)
Q Consensus 169 ~~l~~~F~~~G~~~i~~~~~~~~~g~afV~f~~~~~A~~A~~~l~~~ 215 (320)
.++++.+..+| . .++..+...+|..|.+.++|..+.+.+...
T Consensus 60 ~~~~~~L~~~g--~---~~MSGSGstvF~~f~~~~~a~~~~~~l~~~ 101 (120)
T d1oj4a2 60 DAVLSWLLEYA--P---SRLTGTGACVFAEFDTESEARQVLEQAPEW 101 (120)
T ss_dssp HHHHHHHTTTS--C---EEECTTSSCEEEEESSHHHHHHHHHHSCGG
T ss_pred HHHHHHHhhcc--c---ceecCCCCEEEEEeCCHHHHHHHHHHcCcc
Confidence 56777788888 4 345555668999999999999999988644
No 183
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=48.99 E-value=18 Score=24.30 Aligned_cols=40 Identities=18% Similarity=0.414 Sum_probs=29.2
Q ss_pred HHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCC
Q 020844 49 TLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTG 97 (320)
Q Consensus 49 ~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~ 97 (320)
++++.+..+|.+ +| || +-..+|..|.+.++|..+.+.+..
T Consensus 61 ~~~~~L~~~g~~---~M-----SG-SGstvF~~f~~~~~a~~~~~~l~~ 100 (120)
T d1oj4a2 61 AVLSWLLEYAPS---RL-----TG-TGACVFAEFDTESEARQVLEQAPE 100 (120)
T ss_dssp HHHHHHTTTSCE---EE-----CT-TSSCEEEEESSHHHHHHHHHHSCG
T ss_pred HHHHHHhhcccc---ee-----cC-CCCEEEEEeCCHHHHHHHHHHcCc
Confidence 466667788853 33 44 234789999999999999988753
No 184
>d2f06a1 d.58.18.11 (A:71-141) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=48.93 E-value=24 Score=21.21 Aligned_cols=55 Identities=11% Similarity=0.054 Sum_probs=35.8
Q ss_pred EEECCCCccCcHHHHHHHHhccCCccEEEEEeeCCCcEEEEEe--CCHHHHHHHHHHcCCC
Q 020844 157 VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRY--STHAEAALAIQMGNTT 215 (320)
Q Consensus 157 l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~~g~afV~f--~~~~~A~~A~~~l~~~ 215 (320)
+++.|-|-. -.++.+.|+..| ..|..+....+++++.+.| ++.+.|..+++. +|.
T Consensus 4 V~v~d~pG~--L~~v~~~L~~~~-InI~~~y~~~~~~~~~~vl~vdd~~~a~~~L~~-~G~ 60 (71)
T d2f06a1 4 ISCPNVPGA--LAKVLGFLSAEG-VFIEYMYSFANNNVANVVIRPSNMDKCIEVLKE-KKV 60 (71)
T ss_dssp EEEESSTTH--HHHHHHHHHHTT-CCEEEEEEEEETTEEEEEEEESCHHHHHHHHHH-TTC
T ss_pred EEecCCccH--HHHHHHHHHHCC-CCEEEEEEEcCCCcEEEEEEECCHHHHHHHHHH-CCC
Confidence 444444432 345788888887 6888887776666665544 677777777765 444
No 185
>d1xn9a_ d.12.1.3 (A:) Ribosomal protein S24e {Methanosarcina mazei [TaxId: 2209]}
Probab=40.35 E-value=11 Score=24.77 Aligned_cols=48 Identities=6% Similarity=0.105 Sum_probs=27.6
Q ss_pred cCcHHHHHHHh-ccCCCeeEEEEee---c-CCCCCccceEEEEecCHHHHHHHH
Q 020844 44 EVTDATLFACF-SVYPSCSDARVMW---D-QKTGRSRGFGFVSFRNQQDAQSAI 92 (320)
Q Consensus 44 ~~te~~l~~~F-~~~G~i~~v~i~~---~-~~~g~~~G~afV~f~~~~~A~~A~ 92 (320)
..+-.+|++.+ +.||.-.++.++. . --.+.+.|||+| |.+.+.|...-
T Consensus 29 Tpsr~ei~~kla~~~~~~~~~vvv~~~~t~fG~~~stG~a~I-Yd~~e~~k~~E 81 (101)
T d1xn9a_ 29 TPSRNDVRNKLAAMLNAPLELLVIQRIKTEYGMQESKGYAKL-YEDADRMKQVE 81 (101)
T ss_dssp CCCHHHHHHHHHHHTTCCTTTEEEEEEEECSSSSEEEEEEEE-CSCHHHHHHHH
T ss_pred CCCHHHHHHHHHHhHCcCcCEEEEEcCcccCCCceEEEEEEE-ECCHHHHHhhC
Confidence 45667777666 3355332222222 2 123577888887 88888876554
No 186
>d2v94a1 d.12.1.3 (A:1-93) Ribosomal protein S24e {Pyrococcus abyssi [TaxId: 29292]}
Probab=37.59 E-value=8.8 Score=24.88 Aligned_cols=46 Identities=7% Similarity=0.119 Sum_probs=24.7
Q ss_pred cCcHHHHHHHh-ccCCCeeEEEEeecCC----CCCccceEEEEecCHHHHHH
Q 020844 44 EVTDATLFACF-SVYPSCSDARVMWDQK----TGRSRGFGFVSFRNQQDAQS 90 (320)
Q Consensus 44 ~~te~~l~~~F-~~~G~i~~v~i~~~~~----~g~~~G~afV~f~~~~~A~~ 90 (320)
..+-.+|++.+ +.+|.-.+..++.+-. .+.+.|||+| |.+.+.|.+
T Consensus 30 Tpsr~ei~~kla~~~~~~~~~vvv~~~~t~fG~~~stG~a~I-Yd~~e~~kk 80 (93)
T d2v94a1 30 TPSRKDVKGKLVAMLDLNPETTVIQYIRSYFGSYKSKGYAKY-YYDKDRMLY 80 (93)
T ss_dssp CCCHHHHHHHHHHHHTCCGGGEEEEEEECCTTCSEEEEEEEE-ESSHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCCCEEEEEeCccCCCCceEEEEEEE-ECCHHHHHh
Confidence 45566666544 2334322222222212 2567788877 888888754
No 187
>d1ueka2 d.58.26.5 (A:149-268) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]}
Probab=35.96 E-value=38 Score=22.34 Aligned_cols=44 Identities=14% Similarity=0.018 Sum_probs=31.4
Q ss_pred HHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCC
Q 020844 48 ATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGK 98 (320)
Q Consensus 48 ~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~ 98 (320)
+++++.+..+|... +.| +| +-...|..|.+.++|+++.+.|...
T Consensus 66 ~~~~~~l~~~g~~~-~~m-----SG-SGst~F~l~~~~~~a~~~~~~l~~~ 109 (120)
T d1ueka2 66 KEVRGRMRALGLRG-VLM-----SG-SGSAFFGLAEGPDHARRAAEALRAW 109 (120)
T ss_dssp HHHHHHHHHTTCEE-EEE-----CT-TSSCEEEECSSHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhhhhh-eee-----cC-CCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 45666677777643 333 34 2346899999999999999998765
No 188
>d1ywxa1 d.12.1.3 (A:1-102) Ribosomal protein S24e {Methanococcus maripaludis [TaxId: 39152]}
Probab=32.33 E-value=14 Score=24.38 Aligned_cols=46 Identities=4% Similarity=0.034 Sum_probs=25.3
Q ss_pred cCcHHHHHHHhc-cCC---CeeEEEEeec-CCCCCccceEEEEecCHHHHHH
Q 020844 44 EVTDATLFACFS-VYP---SCSDARVMWD-QKTGRSRGFGFVSFRNQQDAQS 90 (320)
Q Consensus 44 ~~te~~l~~~F~-~~G---~i~~v~i~~~-~~~g~~~G~afV~f~~~~~A~~ 90 (320)
..+-.+|++.+. .|| ...-+.=++. --.|.+.|||+| |.+.+.|.+
T Consensus 29 Tpsr~ei~~kla~~~~~~~~~vvv~~~~t~fG~~~stG~a~I-Yd~~e~~kk 79 (102)
T d1ywxa1 29 TPSIKDVKMKLVAVLNANKQVLVVDTLDQIFGKLEAEGYAKI-YNDEKAMAT 79 (102)
T ss_dssp CCCHHHHHHHHHHHHTSCSTTEEEEEEEECSSSSEEEEEEEE-CSCHHHHHH
T ss_pred CCCHHHHHHHHHHHHCcCcCEEEEEcCEecCCCCeEEEEEEE-ECCHHHHHh
Confidence 455666666553 233 2222222222 223678888887 888888764
No 189
>d2g1da1 d.12.1.3 (A:1-98) Ribosomal protein S24e {Thermoplasma acidophilum [TaxId: 2303]}
Probab=30.63 E-value=10 Score=24.82 Aligned_cols=47 Identities=6% Similarity=0.056 Sum_probs=27.0
Q ss_pred cCcHHHHHHHhc-cCCCeeEEEEeecCCC----CCccceEEEEecCHHHHHHH
Q 020844 44 EVTDATLFACFS-VYPSCSDARVMWDQKT----GRSRGFGFVSFRNQQDAQSA 91 (320)
Q Consensus 44 ~~te~~l~~~F~-~~G~i~~v~i~~~~~~----g~~~G~afV~f~~~~~A~~A 91 (320)
..+-.+|++.+. .||.-.+..++..-.| +.+.|||+| |.+.+.|.+.
T Consensus 30 Tpsr~ei~~kla~~~~~~~~~vvv~~~~t~fG~~~stG~a~I-Yd~~e~~kk~ 81 (98)
T d2g1da1 30 TPSREEIKELIAKHEGVDKELVIVDNNKQLTGKHEIEGYTKI-YADKPSAMLY 81 (98)
T ss_dssp CCCHHHHHHHHHHHHHSCSTTEECCCCCCCSSSSEEEEEEEE-ESHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCcCEEEEEcCEecCCCceEEEEEEE-ECCHHHHHhh
Confidence 556667776653 3443333444443333 567888887 7777776543
No 190
>d1q4ra_ d.58.4.4 (A:) Hypothetical protein AT3G17210.1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=28.97 E-value=55 Score=20.81 Aligned_cols=52 Identities=12% Similarity=0.151 Sum_probs=33.7
Q ss_pred CCccCcHHHHHHHh-------ccCCCeeEEEEeecCC-CCCccce--EE-EEecCHHHHHHHH
Q 020844 41 LSPEVTDATLFACF-------SVYPSCSDARVMWDQK-TGRSRGF--GF-VSFRNQQDAQSAI 92 (320)
Q Consensus 41 Lp~~~te~~l~~~F-------~~~G~i~~v~i~~~~~-~g~~~G~--af-V~f~~~~~A~~A~ 92 (320)
|-.+++++++.+++ .....|.++.+-++.. .+..+|| || ++|.+.++-+.-.
T Consensus 10 ~k~~~~~~~~~~~~~~l~~L~~~ip~i~~~~~G~~~~~~~~~~~y~~~l~~~F~s~e~l~~Y~ 72 (103)
T d1q4ra_ 10 FKDGVSPEKIEELIKGYANLVNLIEPMKAFHWGKDVSIENLHQGYTHIFESTFESKEAVAEYI 72 (103)
T ss_dssp ECTTCCHHHHHHHHHHHHTHHHHCTTCCEEEEEECCCSSSCSTTCCEEEEEEESCHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHHHHHhhhhCceeEEEEeccccCCcccCCCccEEEEEEECCHHHHHHHh
Confidence 55667777655544 3456677887766532 2566776 65 6899998876643
No 191
>d1ip9a_ d.15.2.2 (A:) Bud emergence mediator Bemp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=27.47 E-value=30 Score=21.61 Aligned_cols=66 Identities=14% Similarity=0.128 Sum_probs=39.8
Q ss_pred CCceEEEecccCCCCcCCCCceeEEEcCCCccCcHHHHHHHh-ccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHH
Q 020844 13 GQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSA 91 (320)
Q Consensus 13 g~~i~v~~~~~~~~~~~~~~~~~l~V~nLp~~~te~~l~~~F-~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A 91 (320)
.+.|+|....... +++--||.+++-.+|++.. .+|. +..+.|...-..| -+|.+.+-++.+.|
T Consensus 10 ~~~ikVKv~~~~D----------~~~~~l~~~it~~dL~~kI~~rf~-~~~~~lkY~Dedg-----d~v~i~sD~Dl~~a 73 (85)
T d1ip9a_ 10 LKTTKIKFYYKDD----------IFALMLKGDTTYKELRSKIAPRID-TDNFKLQTKLFDG-----SGEEIKTDSQVSNI 73 (85)
T ss_dssp CCCEEEEECBTTC----------CEEEEECSCCCHHHHHHHHHHHHT-SSCEEEEECCSSS-----CCSCCCSHHHHHHH
T ss_pred CCCEEEEEEECCc----------EEEEEeCCCCCHHHHHHHHHHHhC-CCceEEEEEcCCC-----CEEEEeCHHHHHHH
Confidence 3566666654221 2333358889988887655 3342 3344443322233 25789999999999
Q ss_pred HHH
Q 020844 92 IND 94 (320)
Q Consensus 92 ~~~ 94 (320)
++.
T Consensus 74 i~~ 76 (85)
T d1ip9a_ 74 IQA 76 (85)
T ss_dssp HHT
T ss_pred HHh
Confidence 974
No 192
>d2ix0a2 b.40.4.5 (A:4-82) Exoribonuclease 2, RNB {Escherichia coli [TaxId: 562]}
Probab=26.80 E-value=13 Score=23.19 Aligned_cols=45 Identities=18% Similarity=0.267 Sum_probs=29.2
Q ss_pred cEEEEEeeCCCcEEEEEeCCHHHHHHHHHHcCCCCcccccCeEeEEEec
Q 020844 182 VIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTTQSSYLFGKQMKCSWG 230 (320)
Q Consensus 182 ~i~~~~~~~~~g~afV~f~~~~~A~~A~~~l~~~~~~~~~g~~l~v~~a 230 (320)
.++.+.-...+|||||..++.++.-..-..|++. +.|-.+.|...
T Consensus 18 ~~~G~i~~~~~G~GFv~~d~~~DifI~~~~~~~A----~~GD~V~v~i~ 62 (79)
T d2ix0a2 18 RAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKV----MHGDRIIAVIH 62 (79)
T ss_dssp EEEEEEECCC--CEEEEEETTEEEEECHHHHTTC----CTTCEEEEEEE
T ss_pred EEEEEEEEeCCCcEEEEECCCCcEEECHHHHcCC----CCCCEEEEEEE
Confidence 4555555666899999988765554455666766 77777777653
No 193
>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}
Probab=26.34 E-value=8.3 Score=19.67 Aligned_cols=12 Identities=17% Similarity=0.542 Sum_probs=9.5
Q ss_pred cHHHHHHHhccC
Q 020844 46 TDATLFACFSVY 57 (320)
Q Consensus 46 te~~l~~~F~~~ 57 (320)
+|++|++.|.-|
T Consensus 1 seeel~eAF~~F 12 (33)
T d2hf5a1 1 SEEEIREAFRVF 12 (33)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHh
Confidence 578888888766
No 194
>d1vqos1 d.12.1.1 (S:1-81) Ribosomal protein L23 {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=25.96 E-value=22 Score=22.15 Aligned_cols=51 Identities=14% Similarity=0.069 Sum_probs=37.2
Q ss_pred EEECCCCccCcHHHHHHHHhccCCccEEEEEeeCC---CcEEEEEeCCHHHHHH
Q 020844 157 VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD---KGFGFVRYSTHAEAAL 207 (320)
Q Consensus 157 l~V~nl~~~~t~~~l~~~F~~~G~~~i~~~~~~~~---~g~afV~f~~~~~A~~ 207 (320)
-|+..++.+.+..+|++.++..=.+.+..+....- +--|||.+....+|..
T Consensus 23 ~y~F~V~~~A~K~~IK~AVe~lf~VkV~~Vnt~~~~~~~KkA~V~L~~~~~a~d 76 (81)
T d1vqos1 23 KLQFAVDDRASKGEVADAVEEQYDVTVEQVNTQNTMDGEKKAVVRLSEDDDAQE 76 (81)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHCCCEEEEEEEECTTSSEEEEEEECTTSCHHH
T ss_pred EEEEEEcCcCCHHHHHHHHHHHcCCceeEEEEeEcCCCcEEEEEEeCCCCcHHH
Confidence 45556799999999998888642368888877643 3479999987665544
No 195
>d2od6a1 d.58.4.22 (A:1-109) Hypothetical protein GOS_2359375 {environmental samples}
Probab=25.93 E-value=82 Score=20.52 Aligned_cols=47 Identities=9% Similarity=0.056 Sum_probs=34.3
Q ss_pred HHHHHHhccCCCeeEEE-EeecCCCCCccceEEEEecCHHHHHHHHHHh
Q 020844 48 ATLFACFSVYPSCSDAR-VMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 95 (320)
Q Consensus 48 ~~l~~~F~~~G~i~~v~-i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l 95 (320)
+++.+.|.+.|-+.... -+.++ .|..+-...-||+++++-++|...+
T Consensus 32 ~~~~~~Lk~~Gl~r~~~~~iwNk-~~~fr~~~i~EYkd~~Afk~Cq~i~ 79 (109)
T d2od6a1 32 PVWVKEMKSRGLLKFSMNRVWNK-GEVFRVVMTYEYKDRASFEANIAYL 79 (109)
T ss_dssp HHHHHHHHTTTEEEEEEEEECSS-SSCEEEEEEEEESSHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCceEEEEEEeCC-CCcEEEEEEEEECCHHHHHHHHHHH
Confidence 45667777889876543 33343 6777777788999999999998665
No 196
>d1qama_ c.66.1.24 (A:) rRNA adenine dimethylase {Bacillus subtilis, Ermc' [TaxId: 1423]}
Probab=23.65 E-value=38 Score=25.67 Aligned_cols=21 Identities=5% Similarity=0.105 Sum_probs=18.0
Q ss_pred eEEEcCCCccCcHHHHHHHhc
Q 020844 35 NIFVGDLSPEVTDATLFACFS 55 (320)
Q Consensus 35 ~l~V~nLp~~~te~~l~~~F~ 55 (320)
...|+|||+++|-.-|..++.
T Consensus 87 ~~vv~NLPYnIss~il~~ll~ 107 (235)
T d1qama_ 87 YKIFGNIPYNISTDIIRKIVF 107 (235)
T ss_dssp CEEEEECCGGGHHHHHHHHHH
T ss_pred ceeeeeehhhhhHHHHHHHHh
Confidence 356899999999999999874
No 197
>d1dcea2 b.7.4.1 (A:242-350) Rab geranylgeranyltransferase alpha-subunit, insert domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=21.53 E-value=14 Score=24.23 Aligned_cols=36 Identities=17% Similarity=0.395 Sum_probs=25.8
Q ss_pred ccCCCceEEEecccCCCCcCCCCceeEEEcCCCccCcHHH
Q 020844 10 HLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDAT 49 (320)
Q Consensus 10 ~~~g~~i~v~~~~~~~~~~~~~~~~~l~V~nLp~~~te~~ 49 (320)
.++|.||.|.|.++.... ....|+|..||...-.++
T Consensus 36 ~~Dg~p~~veWRtp~gr~----r~s~vwlcdlP~~sl~d~ 71 (109)
T d1dcea2 36 MVDEAPLSVEWRTPDGRN----RPSHVWLCDLPAASLNDQ 71 (109)
T ss_dssp EESSSEECCCCBCTTSSC----CSEEEEEEECCGGGTSTT
T ss_pred EeCCCcEEEEEeCCCCcc----CcCcEEEEeCChhhcCcc
Confidence 456899999999876532 233799999998654443
No 198
>d2cfxa2 d.58.4.2 (A:64-140) Transcriptional regulator LrpC {Bacillus subtilis [TaxId: 1423]}
Probab=21.52 E-value=78 Score=18.72 Aligned_cols=49 Identities=8% Similarity=0.021 Sum_probs=40.9
Q ss_pred cHHHHHHHhccCCCeeEEEEeecCCCCCccceEEEEecCHHHHHHHHHHhCCC
Q 020844 46 TDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGK 98 (320)
Q Consensus 46 te~~l~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~f~~~~~A~~A~~~l~~~ 98 (320)
.-+++.+.+..+-+|.+|..+ +|..-=...|.+.+.++-++.++.+.+.
T Consensus 14 ~~~~~~~~i~~~peV~e~~~v----tG~~D~il~v~~~d~~~l~~~i~~l~~v 62 (77)
T d2cfxa2 14 DYERFKSYIQTLPNIEFCYRI----AGAACYMLKINAESLEAVEDFINKTSPY 62 (77)
T ss_dssp CHHHHHHHHHTCTTEEEEEEE----ESSSSEEEEEEESSHHHHHHHHHHHTTT
T ss_pred CHHHHHHHHhcCchheEEEEE----cCCCCEEEEEEECCHHHHHHHHhhCCCc
Confidence 467889999999999999886 5655557779999999999999888764
No 199
>d1m6ya1 a.60.13.1 (A:115-215) Putative methyltransferase TM0872, insert domain {Thermotoga maritima [TaxId: 2336]}
Probab=20.23 E-value=18 Score=23.59 Aligned_cols=18 Identities=17% Similarity=0.148 Sum_probs=16.0
Q ss_pred cCcHHHHHHHhccCCCee
Q 020844 44 EVTDATLFACFSVYPSCS 61 (320)
Q Consensus 44 ~~te~~l~~~F~~~G~i~ 61 (320)
+.++++|..+|..||+..
T Consensus 30 ~~~~~~L~~Il~~yGee~ 47 (101)
T d1m6ya1 30 ELPEEELARIIFEYGEEK 47 (101)
T ss_dssp HSCHHHHHHHHHHTTCCT
T ss_pred hhhHHHHHHHHHHhccch
Confidence 589999999999999863
Done!