Your job contains 1 sequence.
>020845
MAKALSVLNLPAHVAPRRNHSRPSLSYRPMMVTMAMSTPNKNKSYWTSVHEDIGAHLRQA
VVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIH
ENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRV
MVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAAC
GAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVNSFNDENA
EVIFSLVDDNITHVLGFNLG
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 020845
(320 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2093832 - symbol:AT3G29430 species:3702 "Arabi... 240 2.7e-20 1
TAIR|locus:2046283 - symbol:AT2G18620 species:3702 "Arabi... 235 9.2e-20 1
TAIR|locus:2115450 - symbol:GGPS1 "geranylgeranyl pyropho... 236 1.1e-19 1
TAIR|locus:2046258 - symbol:GGPS4 "geranylgeranyl pyropho... 234 1.9e-19 1
UNIPROTKB|P80042 - symbol:GGPS1 "Geranylgeranyl pyrophosp... 233 2.4e-19 1
TAIR|locus:2079028 - symbol:AT3G32040 species:3702 "Arabi... 227 1.0e-18 1
TAIR|locus:2121149 - symbol:GGR "geranylgeranyl reductase... 224 1.4e-18 1
TAIR|locus:2089626 - symbol:AT3G14530 "AT3G14530" species... 223 3.0e-18 1
TAIR|locus:2010182 - symbol:GGPS6 "geranylgeranyl pyropho... 204 1.3e-15 1
TAIR|locus:2087550 - symbol:AT3G20160 species:3702 "Arabi... 200 9.2e-15 1
TAIR|locus:2048993 - symbol:GGPS2 "geranylgeranyl pyropho... 197 4.1e-14 1
UNIPROTKB|Q74CA9 - symbol:GSU1765 "Trans-isoprenyl diphos... 168 1.3e-10 1
TIGR_CMR|GSU_1765 - symbol:GSU_1765 "geranyltranstransfer... 168 1.3e-10 1
UNIPROTKB|Q3AAM7 - symbol:CHY_1988 "Geranyltranstransfera... 157 2.8e-09 1
TIGR_CMR|CHY_1988 - symbol:CHY_1988 "geranyltranstransfer... 157 2.8e-09 1
UNIPROTKB|Q4K5A6 - symbol:ispA "Geranyltranstransferase" ... 136 9.1e-07 1
UNIPROTKB|Q0C153 - symbol:ispA "Geranyltranstransferase" ... 125 1.7e-05 1
UNIPROTKB|Q81M53 - symbol:ispA "Geranyltranstransferase" ... 121 5.1e-05 1
TIGR_CMR|BA_4402 - symbol:BA_4402 "geranyltranstransferas... 121 5.1e-05 1
TIGR_CMR|ECH_0455 - symbol:ECH_0455 "putative geranyltran... 106 0.00030 2
>TAIR|locus:2093832 [details] [associations]
symbol:AT3G29430 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=RCA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
EMBL:AP001309 GO:GO:0016117 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2682670 EMBL:DQ056612 IPI:IPI00540813
RefSeq:NP_189589.1 UniGene:At.53571 ProteinModelPortal:Q9LIA0
SMR:Q9LIA0 STRING:Q9LIA0 EnsemblPlants:AT3G29430.1 GeneID:822604
KEGG:ath:AT3G29430 TAIR:At3g29430 InParanoid:Q9LIA0 OMA:NDRNSAF
PhylomeDB:Q9LIA0 Genevestigator:Q9LIA0 Uniprot:Q9LIA0
Length = 357
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 71/247 (28%), Positives = 109/247 (44%)
Query: 43 KSYWTSVHEDIGAHLRQAXXXXXXXXXXXXMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
KSY E + A L + +R+ + A + P LC+AACELVGG
Sbjct: 64 KSYMIRKAESVSAALNVSVPLQEPLTIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEAT 123
Query: 103 XXXXXXXXXXXXXXSFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
S IH++LP D L + KPT + F + +L DA+L E
Sbjct: 124 AMSAACAVEMIHTSSLIHDDLPCMDDADL-RRGKPTNHKEFGEDMAVLAGDALLALAFEH 182
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ-CDDDDRKLNGITDVEM 221
+ N R++R ++E+ +A+G++G+V GQ +L CSQ + DD L + + +
Sbjct: 183 MTFVSNGLVAPE-RMIRAVMELAKAIGTKGLVAGQVTDL-CSQGLNPDDVGLERLEFIHL 240
Query: 222 TYETYKKKEGRLHXXXXXXXXXXXXXSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEE 281
K L +E+EIE LR+Y +G++ +V L TE +E
Sbjct: 241 ------HKTAALLEAAAVLGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTKE 294
Query: 282 LKKLAFK 288
L K A K
Sbjct: 295 LGKTAGK 301
>TAIR|locus:2046283 [details] [associations]
symbol:AT2G18620 species:3702 "Arabidopsis thaliana"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0016117 EMBL:AC006135 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501 EMBL:DQ446520
EMBL:DQ652999 IPI:IPI00544740 PIR:E84566 RefSeq:NP_179452.1
UniGene:At.52813 ProteinModelPortal:Q9ZU77 SMR:Q9ZU77 STRING:Q9ZU77
EnsemblPlants:AT2G18620.1 GeneID:816377 KEGG:ath:AT2G18620
TAIR:At2g18620 InParanoid:Q9ZU77 OMA:YMIGKAN PhylomeDB:Q9ZU77
Genevestigator:Q9ZU77 Uniprot:Q9ZU77
Length = 347
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 65/216 (30%), Positives = 102/216 (47%)
Query: 73 MRHFVFAAPVNMAPALCVAACELVGGHREQXXXXXXXXXXXXXXSFIHENLPLSDRTSLI 132
+R+ + A + P LC+AACELVGG S IH++LP D L
Sbjct: 86 IRYSLLARGKRVRPVLCIAACELVGGEESVALPAACAVEMIHTMSLIHDDLPCMDNDDL- 144
Query: 133 PKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQG 192
+ KPT + F + +L DA++ F E LA+S + R++R + E+ +A+GS+G
Sbjct: 145 RRGKPTNHKVFGEDVAVLAGDALISFAFEHLATS---TAVSPARVVRAIGELAKAIGSKG 201
Query: 193 VVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHXXXXXXXXXXXXXSEKEI 252
+V GQ +L D +D G+ +E + K L S++E+
Sbjct: 202 LVAGQVVDLTSGGMDQNDV---GLEVLEFIHV---HKTAVLLEAATVLGAIVGGGSDEEV 255
Query: 253 ELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
E LRR+ +G++ +V L T+ EEL K A K
Sbjct: 256 EKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGK 291
>TAIR|locus:2115450 [details] [associations]
symbol:GGPS1 "geranylgeranyl pyrophosphate synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;TAS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IDA] [GO:0009513 "etioplast" evidence=IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0019761 "glucosinolate
biosynthetic process" evidence=RCA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
EMBL:AL161590 GO:GO:0016117 EMBL:Z99708 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 EMBL:L25813 IPI:IPI00516537 PIR:F85434
RefSeq:NP_195399.1 UniGene:At.304 ProteinModelPortal:P34802
SMR:P34802 STRING:P34802 PaxDb:P34802 PRIDE:P34802
EnsemblPlants:AT4G36810.1 GeneID:829834 KEGG:ath:AT4G36810
TAIR:At4g36810 InParanoid:P34802 KO:K13789 OMA:MEFAHAV
PhylomeDB:P34802 ProtClustDB:CLSN2915918
BioCyc:ARA:AT4G36810-MONOMER BioCyc:MetaCyc:AT4G36810-MONOMER
BRENDA:2.5.1.29 Genevestigator:P34802 GermOnline:AT4G36810
GO:GO:0009513 GO:GO:0051501 Uniprot:P34802
Length = 371
Score = 236 (88.1 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 64/216 (29%), Positives = 102/216 (47%)
Query: 73 MRHFVFAAPVNMAPALCVAACELVGGHREQXXXXXXXXXXXXXXSFIHENLPLSDRTSLI 132
MR+ + A + P LC+AACELVGG S IH++LP D L
Sbjct: 107 MRYSLLAGGKRVRPVLCIAACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDL- 165
Query: 133 PKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQG 192
+ KPT + F + +L DA+L F E LAS+ + + R++R + E+ +A+G++G
Sbjct: 166 RRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGTEG 225
Query: 193 VVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHXXXXXXXXXXXXXSEKEI 252
+V GQ ++ D +D G+ +E + K L S+ EI
Sbjct: 226 LVAGQVVDISSEGLDLNDV---GLEHLEFIH---LHKTAALLEASAVLGAIVGGGSDDEI 279
Query: 253 ELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
E LR++ +G++ +V L T+ +EL K A K
Sbjct: 280 ERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGK 315
>TAIR|locus:2046258 [details] [associations]
symbol:GGPS4 "geranylgeranyl pyrophosphate synthase 4"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;ISS;TAS] [GO:0004311
"farnesyltranstransferase activity" evidence=IGI;IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005783 GO:GO:0005739
GO:GO:0009536 EMBL:CP002685 GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
EMBL:AC006135 EMBL:AC005724 eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2912871 EMBL:DQ446521 EMBL:L22347
IPI:IPI00546039 PIR:G84566 RefSeq:NP_179454.1 UniGene:At.66219
ProteinModelPortal:Q9SLG2 SMR:Q9SLG2 STRING:Q9SLG2
EnsemblPlants:AT2G18640.1 GeneID:816379 KEGG:ath:AT2G18640
TAIR:At2g18640 InParanoid:Q9SLG2 OMA:DIHANKT PhylomeDB:Q9SLG2
BioCyc:ARA:AT2G18640-MONOMER BioCyc:MetaCyc:AT2G18640-MONOMER
Genevestigator:Q9SLG2 Uniprot:Q9SLG2
Length = 372
Score = 234 (87.4 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 76/283 (26%), Positives = 122/283 (43%)
Query: 43 KSYWTSVHEDIGAHLRQAXXXXXXXXXXXXMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K Y S E I L +A MR+ + A + P LC+AACELVGG
Sbjct: 82 KPYMISKAETINRALDEAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGEERL 141
Query: 103 XXXXXXXXXXXXXXSFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
S I ++LP D L + KPT + F + +L A+L E
Sbjct: 142 AIQAACAVEMIHTMSLIKDDLPCMDNDDL-RRGKPTTHKVFGESVAILSGGALLALAFEH 200
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
L +D +S +++R + E+ +++G++G+V GQ +L + +D G+ D+E
Sbjct: 201 LTEADV----SSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDV---GLEDLE-- 251
Query: 223 YETYKKKEGRLHXXXXXXXXXXXXXSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
Y + K G L +EKEIE +R + +G++ +V L T+ EEL
Sbjct: 252 Y-IHVHKTGSLLEASAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDETKSSEEL 310
Query: 283 KKLAFKLREVNSFN-------DENAEVIFSLVDDNITHVLGFN 318
K A K + +++ E + L D H+ GF+
Sbjct: 311 GKTAGKDKVAGKLTYPKVIGVEKSKEFVEKLKRDAREHLQGFD 353
>UNIPROTKB|P80042 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase,
chloroplastic" species:4072 "Capsicum annuum" [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0004311
"farnesyltranstransferase activity" evidence=IDA] [GO:0004337
"geranyltranstransferase activity" evidence=IDA] [GO:0006720
"isoprenoid metabolic process" evidence=IDA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 GO:GO:0009507 GO:GO:0009536 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386
GO:GO:0006720 EMBL:X80267 PIR:S53722 ProteinModelPortal:P80042
SMR:P80042 BioCyc:MetaCyc:MONOMER-12171 Uniprot:P80042
Length = 369
Score = 233 (87.1 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 67/250 (26%), Positives = 109/250 (43%)
Query: 39 PNKNKSYWTSVHEDIGAHLRQAXXXXXXXXXXXXMRHFVFAAPVNMAPALCVAACELVGG 98
P K Y T + L +A MR+ + A + P LC+AACELVGG
Sbjct: 75 PFNFKIYVTEKAISVNKALDEAIIVKEPHVIHEAMRYSLLAGGKRVRPMLCLAACELVGG 134
Query: 99 HREQXXXXXXXXXXXXXXSFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPF 158
++E S IH++LP D L + KPT + + + +L D++L F
Sbjct: 135 NQENAMAAACAVEMIHTMSLIHDDLPCMDNDDL-RRGKPTNHKIYGEDVAVLAGDSLLAF 193
Query: 159 GLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITD 218
E + +S AG RI+ + E+ +++G++G+V GQ +++C+ N
Sbjct: 194 AFEHIVNST--AGVTPSRIVGAVAELAKSIGTEGLVAGQVADIKCTG--------NASVS 243
Query: 219 VEMTYETYKKKEGRLHXXXXXXXXXXXXXSEKEIELLRRYGFYVGMIQGIVSRRLGPTEE 278
+E + K L + E+E LRR+ +G++ +V L T+
Sbjct: 244 LETLEFIHVHKTAALLESSVVLGAILGGGTNVEVEKLRRFARCIGLLFQVVDDILDVTKS 303
Query: 279 IEELKKLAFK 288
EEL K A K
Sbjct: 304 SEELGKTAGK 313
>TAIR|locus:2079028 [details] [associations]
symbol:AT3G32040 species:3702 "Arabidopsis thaliana"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0016117 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2682670 EMBL:AP002033 EMBL:BT015110
EMBL:AK221451 IPI:IPI00544436 RefSeq:NP_189747.1 UniGene:At.50761
ProteinModelPortal:Q9LHR4 SMR:Q9LHR4 STRING:Q9LHR4 PRIDE:Q9LHR4
EnsemblPlants:AT3G32040.1 GeneID:822957 KEGG:ath:AT3G32040
TAIR:At3g32040 InParanoid:Q9LHR4 PhylomeDB:Q9LHR4
Genevestigator:Q9LHR4 Uniprot:Q9LHR4
Length = 360
Score = 227 (85.0 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 72/249 (28%), Positives = 109/249 (43%)
Query: 43 KSYWTSVHEDIGAHLRQAXXXXXXXXXXXXMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
KSY E + L + +R+ + A + P LC+AACELVGG
Sbjct: 67 KSYMIRKAESVSMALNVSVPPQDPLAIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEAT 126
Query: 103 XXXXXXXXXXXXXXSFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE- 161
S IH++LP D L + KPT + F + +L DA+L E
Sbjct: 127 AMSAACAVEMIHTSSLIHDDLPCMDDADL-RRGKPTNHKVFGEHMAVLAGDALLALAFEH 185
Query: 162 -LLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGI-TDV 219
+ SS A R++R + E+ +A+G++G+V GQ ++L CSQ LN +
Sbjct: 186 MTVVSSGLVAPE---RMIRSVTELAKAIGTKGLVAGQVSDL-CSQ------GLNPYDVGL 235
Query: 220 EMTYETYKKKEGRLHXXXXXXXXXXXXXSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEI 279
E + K L +E+EI+ LR+YG +G++ +V + TE
Sbjct: 236 ERLEFIHLHKTAALLEAAAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVTEST 295
Query: 280 EELKKLAFK 288
EEL K A K
Sbjct: 296 EELGKTAGK 304
>TAIR|locus:2121149 [details] [associations]
symbol:GGR "geranylgeranyl reductase" species:3702
"Arabidopsis thaliana" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0004311 "farnesyltranstransferase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00723 GO:GO:0009507 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 EMBL:AL161593 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 EMBL:AL035540
HOGENOM:HOG000009101 KO:K13789 GO:GO:0051501 EMBL:L40577
EMBL:AY057734 EMBL:AF324662 EMBL:AF326906 EMBL:AF339725
EMBL:AF372915 EMBL:AY086829 IPI:IPI00540165 PIR:T05674
RefSeq:NP_195558.1 UniGene:At.20379 ProteinModelPortal:Q39108
SMR:Q39108 IntAct:Q39108 STRING:Q39108 PaxDb:Q39108 PRIDE:Q39108
EnsemblPlants:AT4G38460.1 GeneID:830002 KEGG:ath:AT4G38460
TAIR:At4g38460 InParanoid:Q39108 OMA:SAMRYAV PhylomeDB:Q39108
ProtClustDB:CLSN2685424 Genevestigator:Q39108 GermOnline:AT4G38460
Uniprot:Q39108
Length = 326
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 71/260 (27%), Positives = 110/260 (42%)
Query: 16 PRRNHSRPSLSYRPMMV-TMAMSTPNK-N---KSYWTSVHEDIGAHLRQAXXXXXXXXXX 70
P + H+ P + P + + + S P N ++YWT++ +I L +A
Sbjct: 17 PEKPHTLP-MKLSPAAIRSSSSSAPGSLNFDLRTYWTTLITEINQKLDEAIPVKHPAGIY 75
Query: 71 XXMRHFVFAAPVNMAP-ALCVAACELVGGHREQXXXXXXXXXXXXXXSFIHENLPLSDRT 129
MR+ V A AP +CVAACEL GG R S IH++LP D
Sbjct: 76 EAMRYSVLAQGAKRAPPVMCVAACELFGGDRLAAFPTACALEMVHAASLIHDDLPCMDDD 135
Query: 130 SLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMG 189
+ + KP+ + + +L DA+ P + + S P ILR++ E+ R +G
Sbjct: 136 P-VRRGKPSNHTVYGSGMAILAGDALFPLAFQHIVSHTPPDLVPRATILRLITEIARTVG 194
Query: 190 SQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHXXXXXXXXXXXXXSE 249
S G+ GQY +L+ G + E KK G + +E
Sbjct: 195 STGMAAGQYVDLE-----------GGPFPLSFVQE---KKFGAMGECSAVCGGLLGGATE 240
Query: 250 KEIELLRRYGFYVGMIQGIV 269
E++ LRRYG VGM+ +V
Sbjct: 241 DELQSLRRYGRAVGMLYQVV 260
>TAIR|locus:2089626 [details] [associations]
symbol:AT3G14530 "AT3G14530" species:3702 "Arabidopsis
thaliana" [GO:0004311 "farnesyltranstransferase activity"
evidence=ISS] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 EMBL:AB023038 KO:K13789 GO:GO:0051501
EMBL:BT010463 IPI:IPI00517639 RefSeq:NP_188071.1 UniGene:At.48659
ProteinModelPortal:Q9LUE1 SMR:Q9LUE1 STRING:Q9LUE1
EnsemblPlants:AT3G14530.1 GeneID:820678 KEGG:ath:AT3G14530
TAIR:At3g14530 InParanoid:Q9LUE1 PhylomeDB:Q9LUE1
ProtClustDB:CLSN2682670 Genevestigator:Q9LUE1 Uniprot:Q9LUE1
Length = 360
Score = 223 (83.6 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 70/248 (28%), Positives = 109/248 (43%)
Query: 43 KSYWTSVHEDIGAHLRQAXXXXXXXXXXXXMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K Y E + A L + +R+ + A + P LC+AACELVGG
Sbjct: 67 KLYMIRKAESVNAALDVSVPLLKPLTIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEAT 126
Query: 103 XXXXXXXXXXXXXXSFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE- 161
S IH++LP D L + KPT + + + +L DA+L E
Sbjct: 127 AMSAACAVEMIHTSSLIHDDLPCMDNADL-RRGKPTNHKVYGEDMAVLAGDALLALAFEH 185
Query: 162 -LLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVE 220
+ SS A +++R +VE+ RA+G+ G+V GQ +L + + D K+ G+ +E
Sbjct: 186 MTVVSSGLVAPE---KMIRAVVELARAIGTTGLVAGQMIDLASERLNPD--KV-GLEHLE 239
Query: 221 MTYETYKKKEGRLHXXXXXXXXXXXXXSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
+ K L +E+EIE LR+Y +G++ +V L T+ E
Sbjct: 240 FIH---LHKTAALLEAAAVLGVIMGGGTEQEIEKLRKYARCIGLLFQVVDDILDVTKSTE 296
Query: 281 ELKKLAFK 288
EL K A K
Sbjct: 297 ELGKTAGK 304
>TAIR|locus:2010182 [details] [associations]
symbol:GGPS6 "geranylgeranyl pyrophosphate synthase 6"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;ISS;TAS] [GO:0006744 "ubiquinone biosynthetic process"
evidence=RCA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IGI;IDA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 GO:GO:0009536 GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
EMBL:AC007504 eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 EMBL:AB000835 EMBL:BT011230 EMBL:BT012158
IPI:IPI00537288 RefSeq:NP_175376.1 UniGene:At.38214
UniGene:At.49962 ProteinModelPortal:O22043 SMR:O22043 STRING:O22043
EnsemblPlants:AT1G49530.1 GeneID:841377 KEGG:ath:AT1G49530
TAIR:At1g49530 InParanoid:O22043 OMA:LCLVACE PhylomeDB:O22043
ProtClustDB:CLSN2913613 Genevestigator:O22043 GermOnline:AT1G49530
Uniprot:O22043
Length = 336
Score = 204 (76.9 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 66/220 (30%), Positives = 103/220 (46%)
Query: 73 MRHFVFAAPVNMAPALCVAACELVGGHREQXXXXXXXXXXXXXXSFIHENLPLSDRTSLI 132
MR+ + + P LC+ ACELVGG S I ++LP D SL
Sbjct: 71 MRYTLLPGGKRVRPMLCLVACELVGGQESTAMPAACAVEMIHAASLILDDLPCMDDDSL- 129
Query: 133 PKSKPTMYHAFKPNTELLVADAMLPFGL-ELLASSDNPAGNNSGRILRVMVEMTRAMGSQ 191
+ KPT + F T +L ++A+ + + LAS+ G S R+LR + EM RA+G++
Sbjct: 130 RRGKPTNHKVFGEKTSILASNALRSLAVKQTLASTS--LGVTSERVLRAVQEMARAVGTE 187
Query: 192 GVVEGQYNEL---QCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHXXXXXXXXXXXXXS 248
G+V GQ +L + S ++DD + +E+ + K L S
Sbjct: 188 GLVAGQAADLAGERMSFKNEDDE----LRYLELMHV---HKTAVLVEAAAVVGAIMGGGS 240
Query: 249 EKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
++EIE L+ Y VG++ ++ L T+ EEL K A K
Sbjct: 241 DEEIERLKSYARCVGLMFQVMDDVLDETKSSEELGKTAGK 280
>TAIR|locus:2087550 [details] [associations]
symbol:AT3G20160 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;ISS] [GO:0006744 "ubiquinone
biosynthetic process" evidence=RCA] [GO:0004311
"farnesyltranstransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009536 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 EMBL:AP000383 GO:GO:0016117 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501
ProtClustDB:CLSN2913613 EMBL:DQ446678 EMBL:DQ653096 IPI:IPI00537582
RefSeq:NP_188651.1 UniGene:At.53400 ProteinModelPortal:Q9LJY2
SMR:Q9LJY2 STRING:Q9LJY2 EnsemblPlants:AT3G20160.1 GeneID:821560
KEGG:ath:AT3G20160 TAIR:At3g20160 InParanoid:Q9LJY2 OMA:RSYARCI
PhylomeDB:Q9LJY2 Genevestigator:Q9LJY2 Uniprot:Q9LJY2
Length = 344
Score = 200 (75.5 bits), Expect = 9.2e-15, P = 9.2e-15
Identities = 75/274 (27%), Positives = 117/274 (42%)
Query: 16 PRRNHSRPSLSYRPMMVTMAMSTPNKNKSYWTSVHEDIGAHLRQAXXXXX-XXXXXXXMR 74
PR N +L+ RP+ T A S K SY + + + L +A MR
Sbjct: 27 PRYNDVTSALT-RPL--TSAASYDFKFMSYMVNKAKSVNKALEEAVPLREPELKIREAMR 83
Query: 75 HFVFAAPVNMAPALCVAACELVGGHREQXXXXXXXXXXXXXXSFIHENLPLSDRTSLIPK 134
+ + + + P LC+AACELVGG S I ++LP D SL +
Sbjct: 84 YTLLSDGKRVRPMLCLAACELVGGQESTAMSAACAIEMLHASSLILDDLPCMDNDSL-RR 142
Query: 135 SKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVV 194
KPT + F + +L + A++ ++ SS A RIL+ + EM +A+ +G+V
Sbjct: 143 GKPTNHIVFGESIAILASQALIALAVQKTTSSTF-ADVPPERILKTVQEMVKAV--EGLV 199
Query: 195 EGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHXXXXXXXXXXXXXSEKEIEL 254
GQ +L + + + T +E + K L S++EIE
Sbjct: 200 AGQQADLA-----GEGMRFDSDTGLEHLEFIHIHKTAALLEAAAVMGAIMGGGSDEEIER 254
Query: 255 LRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
LR Y +G++ +V L T+ EEL K A K
Sbjct: 255 LRSYARCIGLMFQVVDDVLDVTKSSEELGKTAGK 288
>TAIR|locus:2048993 [details] [associations]
symbol:GGPS2 "geranylgeranyl pyrophosphate synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;TAS] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0006744 "ubiquinone biosynthetic
process" evidence=RCA] [GO:0004311 "farnesyltranstransferase
activity" evidence=IGI;IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005783 GO:GO:0005739
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0016117 EMBL:AC004482 eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501 EMBL:U44876
EMBL:BT005328 EMBL:AK117954 EMBL:AY087521 EMBL:D85029
IPI:IPI00535829 PIR:S71230 PIR:T02429 RefSeq:NP_179960.1
UniGene:At.1550 ProteinModelPortal:O04046 SMR:O04046 STRING:O04046
PaxDb:O04046 PRIDE:O04046 EnsemblPlants:AT2G23800.1 GeneID:816912
KEGG:ath:AT2G23800 TAIR:At2g23800 InParanoid:O04046 OMA:QSMKTGA
PhylomeDB:O04046 ProtClustDB:CLSN2912871
BioCyc:ARA:AT2G23800-MONOMER BioCyc:MetaCyc:AT2G23800-MONOMER
Genevestigator:O04046 GermOnline:AT2G23800 Uniprot:O04046
Length = 376
Score = 197 (74.4 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 69/281 (24%), Positives = 120/281 (42%)
Query: 45 YWTSVHEDIGAHLRQAXXXXXXXXXXXXMRHFVFAAPVNMAPALCVAACELVGGHREQXX 104
Y S E + L +A MR+ + AA + P LC+A+CELVGG
Sbjct: 88 YMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQENAAM 147
Query: 105 XXXXXXXXXXXXSFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA 164
S I ++LP D L + KPT + + +L A+L E +
Sbjct: 148 PAACAVEMIHTMSLIKDDLPCMDNDDL-RRGKPTTHKVYGEGVAILSGGALLSLAFEHMT 206
Query: 165 SSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYE 224
+++ +S R++ + E+ R++G++G+V GQ ++ D ++ G+ +E +
Sbjct: 207 TAEI----SSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEV---GLEHLEFIHV 259
Query: 225 TYKKKEGRLHXXXXXXXXXXXXXSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
K L S++EIE +R++ +G++ +V L T+ EEL K
Sbjct: 260 ---HKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGK 316
Query: 285 ------LAFKLREVNSFN-DENAEVIFSLVDDNITHVLGFN 318
LA KL +++ E + L D H+ GF+
Sbjct: 317 TAGKDQLAGKLTYPKLIGLEKSKEFVKRLTKDARQHLQGFS 357
>UNIPROTKB|Q74CA9 [details] [associations]
symbol:GSU1765 "Trans-isoprenyl diphosphate synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004337 KO:K13789
RefSeq:NP_952815.1 ProteinModelPortal:Q74CA9 GeneID:2685235
KEGG:gsu:GSU1765 PATRIC:22026373 OMA:RRGNPTN ProtClustDB:CLSK828537
BioCyc:GSUL243231:GH27-1760-MONOMER Uniprot:Q74CA9
Length = 297
Score = 168 (64.2 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 54/210 (25%), Positives = 90/210 (42%)
Query: 73 MRHFVFAAPVNMAPALCVAACELVGGHREQXXXXXXXXXXXXXXSFIHENLPLSDRTSLI 132
MR+ VFA + P L +AAC+ VGG S IH++LP D
Sbjct: 36 MRYSVFAGGKRVRPILMLAACDAVGGDTALALPAACAMEMIHTYSLIHDDLPAMDDDDF- 94
Query: 133 PKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQG 192
+ +PT + F +L DA+L L++S A S R+L V+ E+ GS+G
Sbjct: 95 RRGRPTNHKVFGEAIAILAGDALLTEAFILISSPSYAAAVGSDRLLPVIHEIALCAGSRG 154
Query: 193 VVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHXXXXXXXXXXXXXSEKEI 252
+V GQ +++ + ++++ D+ + +K G L + +
Sbjct: 155 MVGGQVVDME----SEGNKEI----DLATVQYIHTRKTGALIKASIKAGAVLGGANADAV 206
Query: 253 ELLRRYGFYVGMIQGIVSRRL---GPTEEI 279
+ + RYG +G+ I L G TE+I
Sbjct: 207 KAVTRYGEAIGLAFQIADDILDIEGTTEQI 236
>TIGR_CMR|GSU_1765 [details] [associations]
symbol:GSU_1765 "geranyltranstransferase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 KO:K13789 RefSeq:NP_952815.1
ProteinModelPortal:Q74CA9 GeneID:2685235 KEGG:gsu:GSU1765
PATRIC:22026373 OMA:RRGNPTN ProtClustDB:CLSK828537
BioCyc:GSUL243231:GH27-1760-MONOMER Uniprot:Q74CA9
Length = 297
Score = 168 (64.2 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 54/210 (25%), Positives = 90/210 (42%)
Query: 73 MRHFVFAAPVNMAPALCVAACELVGGHREQXXXXXXXXXXXXXXSFIHENLPLSDRTSLI 132
MR+ VFA + P L +AAC+ VGG S IH++LP D
Sbjct: 36 MRYSVFAGGKRVRPILMLAACDAVGGDTALALPAACAMEMIHTYSLIHDDLPAMDDDDF- 94
Query: 133 PKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQG 192
+ +PT + F +L DA+L L++S A S R+L V+ E+ GS+G
Sbjct: 95 RRGRPTNHKVFGEAIAILAGDALLTEAFILISSPSYAAAVGSDRLLPVIHEIALCAGSRG 154
Query: 193 VVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHXXXXXXXXXXXXXSEKEI 252
+V GQ +++ + ++++ D+ + +K G L + +
Sbjct: 155 MVGGQVVDME----SEGNKEI----DLATVQYIHTRKTGALIKASIKAGAVLGGANADAV 206
Query: 253 ELLRRYGFYVGMIQGIVSRRL---GPTEEI 279
+ + RYG +G+ I L G TE+I
Sbjct: 207 KAVTRYGEAIGLAFQIADDILDIEGTTEQI 236
>UNIPROTKB|Q3AAM7 [details] [associations]
symbol:CHY_1988 "Geranyltranstransferase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K13789 OMA:NITEECI RefSeq:YP_360807.1
ProteinModelPortal:Q3AAM7 STRING:Q3AAM7 GeneID:3727552
KEGG:chy:CHY_1988 PATRIC:21277063
BioCyc:CHYD246194:GJCN-1987-MONOMER Uniprot:Q3AAM7
Length = 295
Score = 157 (60.3 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 63/242 (26%), Positives = 98/242 (40%)
Query: 43 KSYWTSVHEDIGAHLRQAXXXXXXXXXXXXMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K Y V E IG L M + + A + P L +AA E G E+
Sbjct: 8 KRYRKMVEEGIGRFLPP--DDTYPPVIHQAMNYSLKAGGKRLRPVLMLAAGEWSGIAPEK 65
Query: 103 XXXXXXXXXXXXXXSFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
S IH++LP D + KPT + F +L DA+L EL
Sbjct: 66 LLPAAVGVECLHTYSLIHDDLPAMDNDDF-RRGKPTNHKVFGEAIAILAGDALLTKAFEL 124
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
A + G + R++RV+ E+ A GS+G++ GQ +L S+ +K D E+
Sbjct: 125 TAKTLEQ-GIPAERVVRVIQELAVASGSEGLIAGQVVDLSSSEA----KK-----DPEVL 174
Query: 223 YETYKKKEGRLHXXXXXXXXXXXXXSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
+ K RL +E+EI+ L YG ++G+ IV L + +++
Sbjct: 175 LYIHLNKTARLIRYSLIAGGILAGATEEEIKALDDYGRHLGLAFQIVDDLLDVVGDFQKI 234
Query: 283 KK 284
K
Sbjct: 235 GK 236
>TIGR_CMR|CHY_1988 [details] [associations]
symbol:CHY_1988 "geranyltranstransferase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K13789 OMA:NITEECI RefSeq:YP_360807.1
ProteinModelPortal:Q3AAM7 STRING:Q3AAM7 GeneID:3727552
KEGG:chy:CHY_1988 PATRIC:21277063
BioCyc:CHYD246194:GJCN-1987-MONOMER Uniprot:Q3AAM7
Length = 295
Score = 157 (60.3 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 63/242 (26%), Positives = 98/242 (40%)
Query: 43 KSYWTSVHEDIGAHLRQAXXXXXXXXXXXXMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K Y V E IG L M + + A + P L +AA E G E+
Sbjct: 8 KRYRKMVEEGIGRFLPP--DDTYPPVIHQAMNYSLKAGGKRLRPVLMLAAGEWSGIAPEK 65
Query: 103 XXXXXXXXXXXXXXSFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
S IH++LP D + KPT + F +L DA+L EL
Sbjct: 66 LLPAAVGVECLHTYSLIHDDLPAMDNDDF-RRGKPTNHKVFGEAIAILAGDALLTKAFEL 124
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
A + G + R++RV+ E+ A GS+G++ GQ +L S+ +K D E+
Sbjct: 125 TAKTLEQ-GIPAERVVRVIQELAVASGSEGLIAGQVVDLSSSEA----KK-----DPEVL 174
Query: 223 YETYKKKEGRLHXXXXXXXXXXXXXSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
+ K RL +E+EI+ L YG ++G+ IV L + +++
Sbjct: 175 LYIHLNKTARLIRYSLIAGGILAGATEEEIKALDDYGRHLGLAFQIVDDLLDVVGDFQKI 234
Query: 283 KK 284
K
Sbjct: 235 GK 236
>UNIPROTKB|Q4K5A6 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:220664
"Pseudomonas protegens Pf-5" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000076
GenomeReviews:CP000076_GR eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337
KO:K13789 OMA:DLISEHK RefSeq:YP_262577.1 PDB:3LJI PDB:3LSN PDB:3P41
PDBsum:3LJI PDBsum:3LSN PDBsum:3P41 ProteinModelPortal:Q4K5A6
STRING:Q4K5A6 DNASU:3479897 GeneID:3479897 KEGG:pfl:PFL_5509
PATRIC:19880507 ProtClustDB:CLSK868404
BioCyc:PFLU220664:GIX8-5546-MONOMER EvolutionaryTrace:Q4K5A6
Uniprot:Q4K5A6
Length = 295
Score = 136 (52.9 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 55/197 (27%), Positives = 83/197 (42%)
Query: 73 MRHFVFAAPVNMAPALCVAACELVGGHREQXXXXXXXXXXXXXXSFIHENLPLSDRTSLI 132
MR+ V + P L AACE +GG EQ S +H++LP D L
Sbjct: 35 MRYSVMNGGKRVRPLLAYAACEALGGKPEQANGAACAVELIHAYSLVHDDLPAMDDDDL- 93
Query: 133 PKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD--NPA-GNNSGRI-LRVMVEMTRAM 188
+ +PT + AF +L D GL+ LA S +PA + S I LR++ + +A
Sbjct: 94 RRGQPTTHKAFDEACAILAGD-----GLQSLAFSALLDPALSDASAEIRLRMVTTLAQAA 148
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHXXXXXXXXXXXXXS 248
G G+V GQ +L D + L Y ++ K G L +
Sbjct: 149 GPAGMVGGQAIDLGSVGLKLDQQALE--------Y-MHRHKTGALIEASVILGALASGRA 199
Query: 249 EK-EIELLRRYGFYVGM 264
EK E++ L+ Y +G+
Sbjct: 200 EKGELKALQTYAQAIGL 216
>UNIPROTKB|Q0C153 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:228405
"Hyphomonas neptunium ATCC 15444" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000158
GenomeReviews:CP000158_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K00795 RefSeq:YP_760540.1
ProteinModelPortal:Q0C153 STRING:Q0C153 GeneID:4289927
KEGG:hne:HNE_1839 PATRIC:32216509 OMA:ICKDISK
ProtClustDB:CLSK2780959 BioCyc:HNEP228405:GI69-1865-MONOMER
Uniprot:Q0C153
Length = 295
Score = 125 (49.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 38/148 (25%), Positives = 68/148 (45%)
Query: 73 MRHFVFAAPVNMAPALCVAACELVGGHREQXXXXXXXXXXXXXXSFIHENLPLSDRTSLI 132
MRH A M P + + G + S +H++LP D
Sbjct: 37 MRHAALANGKRMRPFFVLETGAMFGASEKSLLRTAAALECIHCYSLVHDDLPCMDDDDF- 95
Query: 133 PKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQG 192
+ +PT++ AF T +L DA+L ++LASS+ + + R+L ++ + A G++G
Sbjct: 96 RRGQPTVHKAFDEATAVLAGDALLTLAFKILASSETH-DDPAVRVL-LIERLADAAGARG 153
Query: 193 VVEGQYNELQCSQCDDDDRKLNGITDVE 220
+V GQ ++ ++ R LN IT ++
Sbjct: 154 MVGGQMIDMLE---EESPRDLNTITRMQ 178
>UNIPROTKB|Q81M53 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:1392
"Bacillus anthracis" [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K13789
RefSeq:NP_846630.1 RefSeq:YP_021045.1 RefSeq:YP_030332.1
ProteinModelPortal:Q81M53 DNASU:1087728
EnsemblBacteria:EBBACT00000008555 EnsemblBacteria:EBBACT00000017694
EnsemblBacteria:EBBACT00000019296 GeneID:1087728 GeneID:2819990
GeneID:2851738 KEGG:ban:BA_4402 KEGG:bar:GBAA_4402 KEGG:bat:BAS4082
OMA:FACAVEM ProtClustDB:CLSK917292
BioCyc:BANT260799:GJAJ-4139-MONOMER
BioCyc:BANT261594:GJ7F-4282-MONOMER Uniprot:Q81M53
Length = 296
Score = 121 (47.7 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 40/192 (20%), Positives = 81/192 (42%)
Query: 73 MRHFVFAAPVNMAPALCVAACELVGGHREQXXXXXXXXXXXXXXSFIHENLPLSDRTSLI 132
M + + A + P L A + R S +H++LP D L
Sbjct: 37 MAYSLEAGGKRLRPLLLFATLQAFDKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDL- 95
Query: 133 PKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQG 192
+ KPT + F +L D +L + +++ + + ++ R+++E+ +A G +G
Sbjct: 96 RRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKV-RLVLELAKAAGPEG 154
Query: 193 VVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHXXXXXXXXXXXXXSEKEI 252
+V GQ +++ + ++L T E+ Y +K K G+L +E++
Sbjct: 155 MVGGQVADMEA-----EGKQL---TIDELEY-IHKHKTGKLLEFAVLAGSILSDATEEQE 205
Query: 253 ELLRRYGFYVGM 264
E L + Y+G+
Sbjct: 206 EKLLEFAKYIGL 217
>TIGR_CMR|BA_4402 [details] [associations]
symbol:BA_4402 "geranyltranstransferase" species:198094
"Bacillus anthracis str. Ames" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K13789
RefSeq:NP_846630.1 RefSeq:YP_021045.1 RefSeq:YP_030332.1
ProteinModelPortal:Q81M53 DNASU:1087728
EnsemblBacteria:EBBACT00000008555 EnsemblBacteria:EBBACT00000017694
EnsemblBacteria:EBBACT00000019296 GeneID:1087728 GeneID:2819990
GeneID:2851738 KEGG:ban:BA_4402 KEGG:bar:GBAA_4402 KEGG:bat:BAS4082
OMA:FACAVEM ProtClustDB:CLSK917292
BioCyc:BANT260799:GJAJ-4139-MONOMER
BioCyc:BANT261594:GJ7F-4282-MONOMER Uniprot:Q81M53
Length = 296
Score = 121 (47.7 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 40/192 (20%), Positives = 81/192 (42%)
Query: 73 MRHFVFAAPVNMAPALCVAACELVGGHREQXXXXXXXXXXXXXXSFIHENLPLSDRTSLI 132
M + + A + P L A + R S +H++LP D L
Sbjct: 37 MAYSLEAGGKRLRPLLLFATLQAFDKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDL- 95
Query: 133 PKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQG 192
+ KPT + F +L D +L + +++ + + ++ R+++E+ +A G +G
Sbjct: 96 RRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKV-RLVLELAKAAGPEG 154
Query: 193 VVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHXXXXXXXXXXXXXSEKEI 252
+V GQ +++ + ++L T E+ Y +K K G+L +E++
Sbjct: 155 MVGGQVADMEA-----EGKQL---TIDELEY-IHKHKTGKLLEFAVLAGSILSDATEEQE 205
Query: 253 ELLRRYGFYVGM 264
E L + Y+G+
Sbjct: 206 EKLLEFAKYIGL 217
>TIGR_CMR|ECH_0455 [details] [associations]
symbol:ECH_0455 "putative geranyltranstransferase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0016740 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K00795 OMA:ICKDISK RefSeq:YP_507273.1
ProteinModelPortal:Q2GH10 STRING:Q2GH10 GeneID:3926960
KEGG:ech:ECH_0455 PATRIC:20576384 ProtClustDB:CLSK749162
BioCyc:ECHA205920:GJNR-456-MONOMER Uniprot:Q2GH10
Length = 267
Score = 106 (42.4 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 33/139 (23%), Positives = 66/139 (47%)
Query: 73 MRHFVFAAPVNMAPALCVAACELVGGHREQXXXXXXXXXXXXXXSFIHENLPLSDRTSLI 132
MR+ +FA ++ P L A+ ++ + ++ S IH++LP D + I
Sbjct: 28 MRYSMFAPGKHIRPFLVNASAQIFNVNVDRILPVSAAVEIIHVYSLIHDDLPGIDNEN-I 86
Query: 133 PKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE-MTRAMGSQ 191
+ + + + F +L DA+L E+L++ D S I M++ + +A+G Q
Sbjct: 87 RRGQASSHKKFNEAIAILTGDALLTLAFEILSTIDE-----SPFIRCCMIKALAKALGYQ 141
Query: 192 GVVEGQYNELQCSQCDDDD 210
G+++GQ + + D +D
Sbjct: 142 GMIQGQILDTETIAKDTND 160
Score = 44 (20.5 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 17/68 (25%), Positives = 32/68 (47%)
Query: 248 SEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVNSFNDENAE-VIFSL 306
S E+ L YG +G + ++I + + K +N N+E+A+ + SL
Sbjct: 187 SNIELNALANYGLNLGHAFQV-------KDDIADANQDKSKNNILNILNNEDAQNYLNSL 239
Query: 307 VDDNITHV 314
+D +I H+
Sbjct: 240 IDKSIEHL 247
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 320 281 0.00083 115 3 11 22 0.36 34
33 0.42 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 20
No. of states in DFA: 600 (64 KB)
Total size of DFA: 199 KB (2113 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.08u 0.13s 21.21t Elapsed: 00:00:01
Total cpu time: 21.08u 0.13s 21.21t Elapsed: 00:00:01
Start: Mon May 20 16:06:16 2013 End: Mon May 20 16:06:17 2013