BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020845
(320 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|164605008|dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis]
Length = 306
Score = 296 bits (759), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 160/315 (50%), Positives = 216/315 (68%), Gaps = 22/315 (6%)
Query: 1 MAKALSVL---NLPAHVAPRRNHSRPSLSYRPMMVTMAMSTPNKNKSYWTSVHEDIGAHL 57
MA ALS NL A N P S+RPM+V AMST ++SYW+SV+ D+ HL
Sbjct: 1 MAGALSSTIHGNLIARAVSSSNPKHPLFSHRPMVV--AMST---DQSYWSSVNADLDTHL 55
Query: 58 RQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAAS 117
+QA+ +++P+ V+EPMRH + +AP APALC+AACELVGGHR QA+ AA+AL ++HA++
Sbjct: 56 KQAIPIRQPLAVFEPMRHLILSAPQTSAPALCIAACELVGGHRNQAMAAASALRLVHASA 115
Query: 118 FIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRI 177
HENLPL+DR +P+++PT+Y PN ELL+AD ++P+G ELLA D+ A NNS R+
Sbjct: 116 STHENLPLTDRPRPMPRTRPTLY---GPNIELLIADGIIPYGFELLARDDDAAENNSNRV 172
Query: 178 LRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACG 237
LR ++E++RAMGSQGV+EGQYNE Q + + ++ I V +KKEG LHAC
Sbjct: 173 LRAIIEISRAMGSQGVIEGQYNESQYEESEGEE-----IFHVGWLQNVCRKKEGTLHACA 227
Query: 238 AACGAILGGGSEKEIELLRRYGFYVGMIQGIVS----RRLGPTEEIEELKKLAFKLREVN 293
ACGAILGGGSE EIE LRRYG YVGM+QGI+S R+ P +E+ +L+ LA L+E+
Sbjct: 228 GACGAILGGGSEDEIEKLRRYGLYVGMVQGILSKVDERKEWPVKEVNKLRDLA--LKELK 285
Query: 294 SFNDENAEVIFSLVD 308
FN + I LV+
Sbjct: 286 DFNQAKVKTISILVE 300
>gi|225460953|ref|XP_002278023.1| PREDICTED: geranylgeranyl pyrophosphate synthase-related protein,
chloroplastic [Vitis vinifera]
Length = 298
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 156/318 (49%), Positives = 204/318 (64%), Gaps = 31/318 (9%)
Query: 1 MAKALSVLNLPAHVAP--RRNHSRPSLSYRPMMVTMAMSTPNKNKSYWTSVHEDIGAHLR 58
MA A + +N ++ R NH RPS P+ VTMA + SYWTS+++DI AHLR
Sbjct: 1 MATAFTHINGQNFISTLHRSNHRRPSGG--PIRVTMA-----QKSSYWTSINDDIDAHLR 53
Query: 59 QAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASF 118
+ + ++EP V++PM H FAAP APALC+AACELVGG RE AI AA+ALH+MHAAS+
Sbjct: 54 RVIAIREPFSVFKPMHHLTFAAPETTAPALCIAACELVGGRRELAIAAASALHLMHAASY 113
Query: 119 IHENLPLSD--RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNN--S 174
HE++PL+D R + P+ PT F PN ELL D M+PFGLELLA S+N ++ S
Sbjct: 114 FHEHIPLTDQPRANSPPRPGPT----FGPNIELLTGDGMIPFGLELLAKSNNLDDDDEHS 169
Query: 175 GRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLH 234
RIL+V++E+TR +GSQGVV GQY + QC D + T KK LH
Sbjct: 170 DRILQVIIELTRTIGSQGVVNGQYIQAQC------DESSPSVGKAGSTRIVTDKKGTELH 223
Query: 235 ACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEE----IEELKKLAFKLR 290
ACGAACGAILGGG EKEIE LR+YGFY G IQ + +L E+ IEE+++LA L+
Sbjct: 224 ACGAACGAILGGGKEKEIEKLRKYGFYAGTIQKM--SKLEEVEKNREVIEEMRRLA--LK 279
Query: 291 EVNSFNDENAEVIFSLVD 308
E+ F++E E I S ++
Sbjct: 280 ELEYFDEEKVEPISSFIN 297
>gi|147776970|emb|CAN63418.1| hypothetical protein VITISV_007690 [Vitis vinifera]
Length = 298
Score = 276 bits (707), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 154/316 (48%), Positives = 201/316 (63%), Gaps = 27/316 (8%)
Query: 1 MAKALSVLNLPAHVAP--RRNHSRPSLSYRPMMVTMAMSTPNKNKSYWTSVHEDIGAHLR 58
MA A + +N ++ R NH RPS P+ VTMA + SYW S+++DI AHLR
Sbjct: 1 MATAFTHVNGQNFISTLHRSNHRRPSGG--PIRVTMA-----QKSSYWNSINDDIDAHLR 53
Query: 59 QAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASF 118
+ + ++EP V++PM H FAAP APALC+AACEL GG RE AI AA+ALH+MHAAS+
Sbjct: 54 RVITIREPFSVFKPMHHLTFAAPETTAPALCIAACELFGGRRELAIAAASALHLMHAASY 113
Query: 119 IHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNN--SGR 176
HE++PL+D+T P S P F PN ELL D M+PFGLELLA S+N ++ S R
Sbjct: 114 FHEHIPLTDQTR--PNSPPRPGPTFGPNIELLTGDGMIPFGLELLAKSNNLDDDDEHSDR 171
Query: 177 ILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHAC 236
IL+V++E+TR +GSQGVV GQY + QC D + T KK LHAC
Sbjct: 172 ILQVIIELTRXIGSQGVVNGQYIQAQC------DESSPSVGKAGSTRIVTDKKGTELHAC 225
Query: 237 GAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEE----IEELKKLAFKLREV 292
GAACGAILGGG EKEIE LR+YGFY G IQ + +L E+ IEE+++LA L+E+
Sbjct: 226 GAACGAILGGGKEKEIEKLRKYGFYAGTIQKM--SKLEEVEKNREVIEEMRRLA--LKEL 281
Query: 293 NSFNDENAEVIFSLVD 308
F++E E I S ++
Sbjct: 282 EYFDEEKVEPISSFIN 297
>gi|255583629|ref|XP_002532570.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223527725|gb|EEF29831.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
Length = 308
Score = 276 bits (706), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 151/290 (52%), Positives = 195/290 (67%), Gaps = 17/290 (5%)
Query: 25 LSYRPMMVTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNM 84
S RP+ M+ S+ YWT ++ DI HL++A+ V+ PV V+EPM H FAAP +
Sbjct: 31 FSRRPVACVMSNSS---KIDYWTCINADIETHLKEAIPVRPPVVVFEPMHHLTFAAPRSF 87
Query: 85 APALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFK 144
APALC+AACELVGG R+QA+ AA+AL +M AA+F HEN+PL+DR P ++P +H F
Sbjct: 88 APALCIAACELVGGSRDQALAAASALRLMIAAAFTHENIPLTDRPR--PSARPMFHHTFG 145
Query: 145 PNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCS 204
PN ELL D M+PF ELLA +NPA +NS RILRVM+E++RAMGSQG+VEGQYNE Q
Sbjct: 146 PNIELLTGDGMIPFAFELLAQLNNPAQDNSDRILRVMIEISRAMGSQGMVEGQYNEFQYD 205
Query: 205 QCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
Q D+ + V + KKKEG HAC ACGAILGGG+E+EIE LRRYG YVG
Sbjct: 206 QSVGDE-----LFHVAWLRDVCKKKEGASHACAGACGAILGGGNEEEIEKLRRYGLYVGT 260
Query: 265 IQGIVSRRLGPTE----EIEELKKLAFKLREVNSFN-DENAEVIFSLVDD 309
IQGI ++ G E E+ +L+ LA L+E+ FN +E I SLV++
Sbjct: 261 IQGIYNKVEGNEEWSLKEVNKLRDLA--LKELKDFNEEEKVRAICSLVEN 308
>gi|46241272|gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antirrhinum majus]
Length = 297
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 145/305 (47%), Positives = 196/305 (64%), Gaps = 23/305 (7%)
Query: 1 MAKALSVLNLPAHVAPRRNHSRPSL-SYRPMMVTMAMSTPNKNKSYWTSVHEDIGAHLRQ 59
MA L+ N + + P S+ + S RP+++ M + ++Y ++ DI ++L++
Sbjct: 1 MAHGLTHFNTKSGLFPSITKSKTTRPSTRPVILAM-----TRTQTYRATIESDIESYLKK 55
Query: 60 AVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFI 119
A+ ++ P V+EPM H FAAP A ALCVAACELVGG R A+ AAAA+H+MH A++
Sbjct: 56 AIPIRAPESVFEPMHHLTFAAPRTSASALCVAACELVGGDRSDAMAAAAAVHLMHVAAYT 115
Query: 120 HENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILR 179
HENLPL+D P SK + H F PN ELL D ++PFGLEL+A S +P NN RILR
Sbjct: 116 HENLPLTDG----PMSKSEIQHKFDPNIELLTGDGIIPFGLELMARSMDPTRNNPDRILR 171
Query: 180 VMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAA 239
++E+TR MGS+G+VEGQY+EL LN + D+E+ KKKEG LHACGAA
Sbjct: 172 AIIELTRVMGSEGIVEGQYHEL----------GLNQLNDLELIEYVCKKKEGTLHACGAA 221
Query: 240 CGAILGGGSEKEIELLRRYGFYVGMIQGIVSR-RLGPTEEIEELKKLAFKLREVNSFNDE 298
CGAILGG E +IE LRR+G YVG +QG++ + R G I+ELK+LA K E+ SF E
Sbjct: 222 CGAILGGCDEDKIEKLRRFGLYVGTVQGLLGKNRSGFEGRIKELKELAVK--ELESFGGE 279
Query: 299 NAEVI 303
E+I
Sbjct: 280 KIELI 284
>gi|323463187|pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Synthase Small
Subunit From Antirrhinum Majus
gi|323463188|pdb|3QKC|A Chain A, Crystal Structure Of Geranyl Diphosphate Synthase Small
Subunit From Antirrhinum Majus
Length = 273
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/265 (50%), Positives = 178/265 (67%), Gaps = 17/265 (6%)
Query: 40 NKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGH 99
+ ++Y ++ DI ++L++A+ ++ P V+EPM H FAAP A ALCVAACELVGG
Sbjct: 4 TRTQTYRATIESDIESYLKKAIPIRAPESVFEPMHHLTFAAPRTSASALCVAACELVGGD 63
Query: 100 REQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFG 159
R A+ AAAA+H+MH A++ HENLPL+D P SK + H F PN ELL D ++PFG
Sbjct: 64 RSDAMAAAAAVHLMHVAAYTHENLPLTDG----PMSKSEIQHKFDPNIELLTGDGIIPFG 119
Query: 160 LELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDV 219
LEL+A S +P NN RILR ++E+TR MGS+G+VEGQY+EL LN + D+
Sbjct: 120 LELMARSMDPTRNNPDRILRAIIELTRVMGSEGIVEGQYHEL----------GLNQLNDL 169
Query: 220 EMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSR-RLGPTEE 278
E+ KKKEG LHACGAACGAILGG E +IE LRR+G YVG +QG++ + R G
Sbjct: 170 ELIEYVCKKKEGTLHACGAACGAILGGCDEDKIEKLRRFGLYVGTVQGLLGKNRSGFEGR 229
Query: 279 IEELKKLAFKLREVNSFNDENAEVI 303
I+ELK+LA K E+ SF E E+I
Sbjct: 230 IKELKELAVK--ELESFGGEKIELI 252
>gi|224135433|ref|XP_002322072.1| predicted protein [Populus trichocarpa]
gi|222869068|gb|EEF06199.1| predicted protein [Populus trichocarpa]
Length = 236
Score = 253 bits (646), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 131/258 (50%), Positives = 173/258 (67%), Gaps = 28/258 (10%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
SYWTSV+++I AHL+QA+ ++ P+ V+EPM H FAAP APALC+AACELVGG+R+QA
Sbjct: 1 SYWTSVNDEIDAHLKQAIPIRPPLSVFEPMHHLTFAAPRTTAPALCIAACELVGGNRDQA 60
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ AA+AL +MHAA+ HE++ L ++ + H+F N ELL D M+PFGLELL
Sbjct: 61 MAAASALRLMHAAALTHEHI-------LSTGNRARIGHSFGSNIELLTGDGMVPFGLELL 113
Query: 164 ASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTY 223
A SD+ NNS RILRV++E+T+AMGSQG+ GQYN+ Q Q D D
Sbjct: 114 AKSDDLTQNNSERILRVIIEITQAMGSQGMALGQYNQFQHGQSDYIDH------------ 161
Query: 224 ETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIE--- 280
KKKEG LH+C A GAILGGG+E+EIE LRRYG YVG++QG++S + EE+
Sbjct: 162 -VCKKKEGELHSCAGAVGAILGGGTEEEIEKLRRYGLYVGLMQGVLSNWVERKEEVSMEK 220
Query: 281 ---ELKKLAFKLREVNSF 295
EL+ LA L+E+ F
Sbjct: 221 VLNELENLA--LKELEGF 236
>gi|229915238|gb|ACQ90681.1| geranyl diphosphate synthase small subunit [Humulus lupulus]
Length = 279
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 125/267 (46%), Positives = 178/267 (66%), Gaps = 18/267 (6%)
Query: 48 SVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAA 107
S+ DI AHL+Q++ +K P+ V+EPM + VF+AP N AP+LCVAACELVGGHR +AI AA
Sbjct: 21 SITADIEAHLKQSITLKPPLSVHEPMYNLVFSAPPNSAPSLCVAACELVGGHRSKAIAAA 80
Query: 108 AALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD 167
+AL ++HAA+F HE+LPL+D P P +++++ P+ +LL+ DA+LP G ELLA S
Sbjct: 81 SALRLLHAANFTHEHLPLTDS----PSPSPVIHNSYDPSIQLLMPDAILPLGFELLAQSY 136
Query: 168 NPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYK 227
NPA NNS R+LRV+VE RA GS+G+++GQY + S + D+ + + E + +
Sbjct: 137 NPAQNNSDRVLRVIVEFARAFGSKGILDGQYRQRVVSISNGDE-----VDNAERVDCSGR 191
Query: 228 KKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRL-------GPTEEIE 280
+KEG++HAC AACGAILG +E+E E LR +G YVGMIQG + + I+
Sbjct: 192 EKEGKMHACAAACGAILGDANEEETEKLRTFGLYVGMIQGYSIKFMREREEEKEAERTIK 251
Query: 281 ELKKLAFKLREVNSFNDENAEVIFSLV 307
EL+ LA L+E+ F+ E I S +
Sbjct: 252 ELRNLA--LKELEHFHGRKLEPISSFI 276
>gi|374639379|gb|AEZ55678.1| geranyl diphosphate synthase small subunit type I [Salvia
miltiorrhiza]
Length = 314
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 126/297 (42%), Positives = 181/297 (60%), Gaps = 21/297 (7%)
Query: 16 PRRNHSRPSLSYRPMMVTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRH 75
P + S S S R +A +N SYW ++ DI +L++++ ++ P V+EPM H
Sbjct: 26 PFKTRSNLSRSSRACTAVVA-----QNHSYWAAIEADIDTYLKKSIAIRSPETVFEPMHH 80
Query: 76 FVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKS 135
FAAP A A+CVAACELVGG R QAI A+A+H+MHAA++ HE+LPL+DR P S
Sbjct: 81 LTFAAPRTAASAICVAACELVGGERSQAIATASAIHIMHAAAYAHEHLPLTDRPR--PNS 138
Query: 136 KPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVE 195
KP + H + PN ELL D M FG ELLA S N RILRV++E++RA GS+G+++
Sbjct: 139 KPAIQHKYGPNIELLTGDGMASFGFELLAGSIRSDHPNPERILRVIIEISRASGSEGIID 198
Query: 196 GQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELL 255
G Y E + D + + I + +KK G +HAC AA GAIL GG+E+EI+ L
Sbjct: 199 GFYRE---KEIVDQHSRFDFIEYL------CRKKYGEMHACAAASGAILAGGAEEEIQKL 249
Query: 256 RRYGFYVGMIQGIVSRRLGPTE---EIEELKKLAFKLREVNSFNDENAEVIFSLVDD 309
R +G Y G + G++ +++ + I +LK LA L+E+ F+ +N E++ SLV D
Sbjct: 250 RNFGHYAGTLIGLLHKKIDTPQIQNVIGKLKDLA--LKELEGFHGKNVELLCSLVAD 304
>gi|342360000|gb|AEL29573.1| geranyl-diphosphate synthase [Medicago sativa]
Length = 301
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 141/303 (46%), Positives = 194/303 (64%), Gaps = 25/303 (8%)
Query: 13 HVAPRRNHSRPSLS--YRPMMVTMAMS-TPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEV 69
H + N R L+ +P V M+M+ TP YW S+H D+ AHL+Q + +KEP+ V
Sbjct: 16 HFSCISNQHRSHLTTKLKPTTVRMSMTQTP-----YWASLHADVEAHLKQTITIKEPLLV 70
Query: 70 YEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRT 129
+EPM H +F AP PALC+AACELVGG R++AI AA+AL +M AA++ HE+LPLSDR
Sbjct: 71 FEPMHHLIFTAPKTTVPALCLAACELVGGQRQEAISAASALLLMEAATYTHEHLPLSDRP 130
Query: 130 SLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMG 189
PK P + H + PN ELL D ++PFG ELLA SD G NS RIL+VMVE++RA+G
Sbjct: 131 G--PKPGPMIDHVYGPNVELLTGDGIVPFGFELLARSD--GGENSERILKVMVEISRAVG 186
Query: 190 S-QGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
S GV++ QY + D D+ I VE +K EGRLH+CGA CG +LGGG
Sbjct: 187 SGGGVIDAQYMKTLGGGSDGDE-----ICHVEEIRRVVEKYEGRLHSCGAVCGGVLGGGC 241
Query: 249 EKEIELLRRYGFYVGMIQGIVSRRLGPTE---EIEELKKLAFKLREVNSFNDENAEVIFS 305
E+EIE LR++GFYVG+IQG++ + G E E+ E + LA ++E+ F D+ + I +
Sbjct: 242 EEEIERLRKFGFYVGIIQGMI--KWGFKEDHKEVVEARNLA--IQELKFFKDKEVDAIKT 297
Query: 306 LVD 308
++
Sbjct: 298 FLN 300
>gi|449444204|ref|XP_004139865.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Cucumis sativus]
gi|449502924|ref|XP_004161781.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Cucumis sativus]
Length = 300
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 123/297 (41%), Positives = 175/297 (58%), Gaps = 27/297 (9%)
Query: 18 RNHSRPSLSYRPMMVTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFV 77
+ +S P + Y + A SYW +++EDI HLR+ + VK+PV VYEP+ HF+
Sbjct: 21 QTNSLPPMPYVRLPPRSAAVMSQITPSYWAAINEDIEDHLRRVIPVKDPVAVYEPLGHFI 80
Query: 78 FAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKP 137
F+AP N APALC+AACELVGGHR+QA+ AA A+ +++AA+ HE PL+ R K
Sbjct: 81 FSAPRNSAPALCIAACELVGGHRDQAMAAATAIQLIYAATCTHEYPPLTARG----KRAS 136
Query: 138 TMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQ 197
+ + N +L+ D + P G E+LA S + + S R+ RVMVE+ RAMG++G + GQ
Sbjct: 137 VVDRVYGSNVQLMTGDGITPMGFEILAESCDWSERGSERVRRVMVEVARAMGTEGWIGGQ 196
Query: 198 YNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRR 257
+ G+ + E +K EG LHACG ACGAI+GGG+E+EIE +R+
Sbjct: 197 F---------------RGLEEEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIEKMRK 241
Query: 258 YGFYVGMIQGIVSRRLG------PTEEIEELKKLAFKLREVNSFNDENAEVIFSLVD 308
YG VG+++G+ G E+IEELK LAFK E+ FN E I+ +D
Sbjct: 242 YGKLVGIVKGLTQIVFGGKENERKREKIEELKVLAFK--ELEGFNGEMVPQIYGFLD 296
>gi|357494535|ref|XP_003617556.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
gi|355518891|gb|AET00515.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
Length = 297
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 134/300 (44%), Positives = 189/300 (63%), Gaps = 23/300 (7%)
Query: 13 HVAPRRNHSRPSLSYRPMMVTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEP 72
H + N R L+ + T+ MS YW S+H DI AHL+Q + +KEP+ V+EP
Sbjct: 16 HFSCISNQHRSHLNTKLKSTTLRMSMTQT--PYWASLHADIEAHLKQTITIKEPLVVFEP 73
Query: 73 MRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLI 132
M H +F AP PALC+A CELVGG R QAI AA+AL +M AA++ HE+LPL+DR
Sbjct: 74 MHHLIFTAPKTTVPALCLATCELVGGQRHQAISAASALLLMEAATYTHEHLPLTDR---- 129
Query: 133 PKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGS-Q 191
+P + H + PN ELL D ++PFG ELLA SD G NS RIL+VMVE++RA+GS
Sbjct: 130 --PRPMINHVYGPNMELLTGDGIVPFGFELLARSD--GGENSERILKVMVEISRAVGSGG 185
Query: 192 GVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKE 251
GV++ QY ++ S D +++ VE +K EGRLH+CGA CG +LGGG E+E
Sbjct: 186 GVIDAQYGKILYSGSDGEEK-----CHVEEIRHVVEKYEGRLHSCGAVCGGVLGGGCEEE 240
Query: 252 IELLRRYGFYVGMIQGIVSRRLGPTE---EIEELKKLAFKLREVNSFNDENAEVIFSLVD 308
IE LR++G+YVG+IQG++ + G E E+ E + LA ++E+ F D+ + I + ++
Sbjct: 241 IERLRKFGYYVGIIQGMI--KWGFKEDHKEVVEARNLA--IQELKFFKDKEVDAIKTFLN 296
>gi|6449050|gb|AAF08792.1|AF182827_1 geranyl diphosphate synthase small subunit [Mentha x piperita]
gi|10637873|emb|CAC10560.1| gpp synthase small subunit [Mentha x piperita]
Length = 313
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/272 (43%), Positives = 180/272 (66%), Gaps = 18/272 (6%)
Query: 41 KNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHR 100
+++ YW ++ DI +L++++ ++ P V+ PM H FAAP A LC+AACELVGG R
Sbjct: 47 QSQPYWAAIEADIERYLKKSITIRPPETVFGPMHHLTFAAPATAASTLCLAACELVGGDR 106
Query: 101 EQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGL 160
QA+ AAAA+H++HAA+++HE+LPL+D + P SKP + H + PN ELL D ++PFG
Sbjct: 107 SQAMAAAAAIHLVHAAAYVHEHLPLTDGSR--PVSKPAIQHKYGPNVELLTGDGIVPFGF 164
Query: 161 ELLASSDNPA-GNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDV 219
ELLA S +PA ++ RILRV++E++RA G +G++ G + E + ++G T +
Sbjct: 165 ELLAGSVDPARTDDPDRILRVIIEISRAGGPEGMISGLHRE---------EEIVDGNTSL 215
Query: 220 EMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIV----SRRLGP 275
+ KKK G +HACGAACGAILGG +E+EI+ LR +G Y G ++G++ S +L
Sbjct: 216 DFIEYVCKKKYGEMHACGAACGAILGGAAEEEIQKLRNFGLYQGTLRGMMEMKNSHQLID 275
Query: 276 TEEIEELKKLAFKLREVNSFNDENAEVIFSLV 307
I +LK+LA L E+ F+ +NAE++ SLV
Sbjct: 276 ENIIGKLKELA--LEELGGFHGKNAELMSSLV 305
>gi|289526778|pdb|3KRA|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium
gi|289526779|pdb|3KRA|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium
gi|289526782|pdb|3KRC|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp
gi|289526783|pdb|3KRC|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp
gi|289526786|pdb|3KRF|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (I)
gi|289526787|pdb|3KRF|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (I)
gi|289526790|pdb|3KRO|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (Ii)
gi|289526791|pdb|3KRO|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (Ii)
gi|289526794|pdb|3KRP|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium And Gpp
gi|289526795|pdb|3KRP|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium And Gpp
Length = 274
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 119/270 (44%), Positives = 178/270 (65%), Gaps = 18/270 (6%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
+ YW ++ DI +L++++ ++ P V+ PM H FAAP A LC+AACELVGG R Q
Sbjct: 2 QPYWAAIEADIERYLKKSITIRPPETVFGPMHHLTFAAPATAASTLCLAACELVGGDRSQ 61
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ AAAA+H++HAA+++HE+LPL+D + P SKP + H + PN ELL D ++PFG EL
Sbjct: 62 AMAAAAAIHLVHAAAYVHEHLPLTDGSR--PVSKPAIQHKYGPNVELLTGDGIVPFGFEL 119
Query: 163 LASSDNPA-GNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEM 221
LA S +PA ++ RILRV++E++RA G +G++ G + E + ++G T ++
Sbjct: 120 LAGSVDPARTDDPDRILRVIIEISRAGGPEGMISGLHRE---------EEIVDGNTSLDF 170
Query: 222 TYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIV----SRRLGPTE 277
KKK G +HACGAACGAILGG +E+EI+ LR +G Y G ++G++ S +L
Sbjct: 171 IEYVCKKKYGEMHACGAACGAILGGAAEEEIQKLRNFGLYQGTLRGMMEMKNSHQLIDEN 230
Query: 278 EIEELKKLAFKLREVNSFNDENAEVIFSLV 307
I +LK+LA L E+ F+ +NAE++ SLV
Sbjct: 231 IIGKLKELA--LEELGGFHGKNAELMSSLV 258
>gi|388519261|gb|AFK47692.1| unknown [Medicago truncatula]
Length = 297
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 131/300 (43%), Positives = 188/300 (62%), Gaps = 23/300 (7%)
Query: 13 HVAPRRNHSRPSLSYRPMMVTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEP 72
H + N R L+ + + + + T YW S+H DI AHL+Q + +KEP+ V+EP
Sbjct: 16 HFSCISNQHRSHLNTK--LKSTTLRTSMTQTPYWASLHADIEAHLKQTITIKEPLVVFEP 73
Query: 73 MRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLI 132
M H +F AP PALC+A CE VGG R QAI AA+AL +M AA++ HE+LPL+DR
Sbjct: 74 MHHLIFTAPKTTVPALCLATCEFVGGQRHQAISAASALLLMEAATYTHEHLPLTDR---- 129
Query: 133 PKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGS-Q 191
+P + H + PN ELL D ++PFG ELLA SD G NS RIL+VMVE++RA+GS
Sbjct: 130 --PRPMINHVYGPNMELLTGDGIVPFGFELLARSD--GGENSERILKVMVEISRAVGSGG 185
Query: 192 GVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKE 251
GV++ QY ++ S D +++ VE +K EGRLH+CGA CG +LGGG E+E
Sbjct: 186 GVIDAQYGKILYSGSDGEEK-----CHVEEIRHVVEKYEGRLHSCGAVCGGVLGGGCEEE 240
Query: 252 IELLRRYGFYVGMIQGIVSRRLGPTE---EIEELKKLAFKLREVNSFNDENAEVIFSLVD 308
IE LR++G+YVG+IQG++ + G E E+ E + LA ++E+ F D+ + I + ++
Sbjct: 241 IERLRKFGYYVGIIQGMI--KWGFKEDHKEVVEARNLA--IQELKFFKDKEVDAIKTFLN 296
>gi|310942864|pdb|3OAB|B Chain B, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942865|pdb|3OAB|C Chain C, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942868|pdb|3OAC|B Chain B, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942869|pdb|3OAC|C Chain C, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
Length = 264
Score = 207 bits (526), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 114/270 (42%), Positives = 171/270 (63%), Gaps = 28/270 (10%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
+ YW ++ DI +L++++ ++ P V+ PM H FAAP A LC+AACELVGG R Q
Sbjct: 2 QPYWAAIEADIERYLKKSITIRPPETVFGPMHHLTFAAPATAASTLCLAACELVGGDRSQ 61
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ AAAA+H++HAA+++HE+LP P + H + PN ELL D ++PFG EL
Sbjct: 62 AMAAAAAIHLVHAAAYVHEHLP------------PAIQHKYGPNVELLTGDGIVPFGFEL 109
Query: 163 LASSDNPA-GNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEM 221
LA S +PA ++ RILRV++E++RA G +G++ G + E + ++G T ++
Sbjct: 110 LAGSVDPARTDDPDRILRVIIEISRAGGPEGMISGLHRE---------EEIVDGNTSLDF 160
Query: 222 TYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIV----SRRLGPTE 277
KKK G +HACGAACGAILGG +E+EI+ LR +G Y G ++G++ S +L
Sbjct: 161 IEYVCKKKYGEMHACGAACGAILGGAAEEEIQKLRNFGLYQGTLRGMMEMKNSHQLIDEN 220
Query: 278 EIEELKKLAFKLREVNSFNDENAEVIFSLV 307
I +LK+LA L E+ F+ +NAE++ SLV
Sbjct: 221 IIGKLKELA--LEELGGFHGKNAELMSSLV 248
>gi|351725007|ref|NP_001238613.1| geranyl-diphosphate synthase [Glycine max]
gi|166835923|gb|ABY90133.1| geranyl-diphosphate synthase [Glycine max]
Length = 283
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/301 (41%), Positives = 184/301 (61%), Gaps = 30/301 (9%)
Query: 9 NLPAHVAPRRNHSRPSLSYRPMMVTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVE 68
N H + +R L +P + M P+ + +W S+ DI AHL+Q + +KEP+E
Sbjct: 10 NFKIHFSLISCQARVPLPVKPAPLRM----PSPHYPHWASLQADIEAHLKQTIPLKEPLE 65
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
V+EPM H F+AP PALC+AACELVGGHR+QA+ AA+AL + A + HE+L
Sbjct: 66 VFEPMLHLAFSAPRTTVPALCLAACELVGGHRQQAMAAASALLLNLANAHAHEHL----- 120
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
+ MY PN ELL D ++PFG ELLA D PA + R+LRVM+E++RA+
Sbjct: 121 ------TDGPMY---GPNIELLTGDGIVPFGFELLARPDGPASASPERVLRVMIEISRAV 171
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVE-MTYETYKKKEGRLHACGAACGAILGGG 247
GS G+ + QY ++ + D + + +VE M +K++G LHACGAA GAILGGG
Sbjct: 172 GSVGLQDAQY--VKKTLWDGGEE----VQNVESMQRFVLEKRDGGLHACGAASGAILGGG 225
Query: 248 SEKEIELLRRYGFYVGMIQGIVSRRLGPTEE-IEELKKLAFKLREVNSFNDENAEVIFSL 306
SE +IE LR +GF+VGM++G++ ++G E+ ++E + LA L+E+ F D + VI S
Sbjct: 226 SEDQIERLRNFGFHVGMMRGML--QMGFMEKHVQEERHLA--LKELQFFMDRDVHVISSF 281
Query: 307 V 307
+
Sbjct: 282 I 282
>gi|158979015|gb|ABW86880.1| geranyl pyrophosphate synthase small subunit [Mentha x piperita]
Length = 313
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 120/272 (44%), Positives = 181/272 (66%), Gaps = 18/272 (6%)
Query: 41 KNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHR 100
+++ YW ++ DI +L++++ ++ P V+ PM H FAAP A ALC+AACELVGG R
Sbjct: 47 QSQPYWAAIEADIDRYLKKSITIRPPETVFGPMHHLTFAAPATAASALCLAACELVGGDR 106
Query: 101 EQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGL 160
QA+ AAAA+H++HAA+++HE+LPL+D + P SKP + H + PN ELL D ++PFG
Sbjct: 107 SQAMAAAAAIHLVHAAAYVHEHLPLTDGSR--PVSKPAIQHKYGPNVELLTGDGIVPFGF 164
Query: 161 ELLASSDNPA-GNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDV 219
ELLA S +PA ++ RILRV++E++RA G +G++ G + E + ++G T +
Sbjct: 165 ELLAGSVDPARTDDPDRILRVIIEISRAGGPEGMISGLHRE---------EEIVDGNTSL 215
Query: 220 EMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIV----SRRLGP 275
+ KKK G +HACGAACGAILGG +E+EI+ LR +G Y G ++G++ S +L
Sbjct: 216 DFIEYVCKKKYGEMHACGAACGAILGGAAEEEIQKLRNFGLYQGTLRGMMEMTNSHQLID 275
Query: 276 TEEIEELKKLAFKLREVNSFNDENAEVIFSLV 307
I +LK+LA L E+ F+ +NAE++ SLV
Sbjct: 276 ENIIGKLKELA--LEELGGFHGKNAELMSSLV 305
>gi|148887805|gb|ABR15421.1| geranyl pyrophosphate synthase small subunit [Mentha canadensis]
Length = 313
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 120/272 (44%), Positives = 181/272 (66%), Gaps = 18/272 (6%)
Query: 41 KNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHR 100
+++ YW ++ DI +L++++ ++ P V+ PM H FAAP A ALC+AACELVGG R
Sbjct: 47 QSQPYWAAIEADIDRYLKKSITIRPPETVFGPMHHLTFAAPATAASALCLAACELVGGDR 106
Query: 101 EQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGL 160
QA+ AAAA+H++HAA+++HE+LPL+D + P SKP + H + PN ELL D ++PFG
Sbjct: 107 SQAMAAAAAIHLVHAAAYVHEHLPLTDGSR--PVSKPAIQHKYGPNVELLTGDGIVPFGF 164
Query: 161 ELLASSDNPA-GNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDV 219
ELLA S +PA ++ RILRV++E++RA G +G++ G + E + ++G T +
Sbjct: 165 ELLAGSVDPARTDDPDRILRVIIEISRAGGPEGMISGLHRE---------EEIVDGNTSL 215
Query: 220 EMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIV----SRRLGP 275
+ KKK G +HACGAACGAILGG +E+EI+ LR +G Y G ++G++ S +L
Sbjct: 216 DFIEYVCKKKYGEMHACGAACGAILGGAAEEEIQKLRNFGLYQGTLRGMMEMKNSHQLID 275
Query: 276 TEEIEELKKLAFKLREVNSFNDENAEVIFSLV 307
I +LK+LA L E+ F+ +NAE++ SLV
Sbjct: 276 ENIIGKLKELA--LEELGGFHGKNAELMSSLV 305
>gi|46241300|gb|AAS82870.1| geranyl diphosphate synthase small subunit [Clarkia breweri]
Length = 300
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/256 (46%), Positives = 159/256 (62%), Gaps = 26/256 (10%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
+YW S+++ I HL+ AV V++P+ V+EP+ H AAP + APALC+AACELVGG QA
Sbjct: 32 TYWDSINDKIDGHLKAAVPVRKPLSVFEPLHHLTLAAPRSSAPALCIAACELVGGSSSQA 91
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ AAAALH++HA+ +H+ L + F N ELL D MLP ELL
Sbjct: 92 MDAAAALHLIHASLSVHKRL-----------YRGGSGSGFGSNIELLTGDGMLPLAFELL 140
Query: 164 ASSDNPAGNN--SGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGIT---- 217
A+S+ AG+ S RILRV+VE+++A GS+G+++G+YNELQ +L G T
Sbjct: 141 ANSEG-AGDESRSRRILRVIVEISKAAGSEGLLKGEYNELQLG-------RLAGFTGGDW 192
Query: 218 -DVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPT 276
D KKEG LHAC AACG ILGGG+E+EIE LR+ G+ VGMI+GIVS + G
Sbjct: 193 RDAFWMDHVCGKKEGGLHACAAACGGILGGGTEEEIEKLRKLGYLVGMIRGIVSVKGGAA 252
Query: 277 EEIEELKKLAFKLREV 292
E EE K+ ++ E
Sbjct: 253 GEDEEWMKVVEEMAET 268
>gi|428229702|gb|AFY98640.1| geranyl-diphosphate synthase [Phaseolus vulgaris]
Length = 273
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 162/291 (55%), Gaps = 43/291 (14%)
Query: 19 NHSRPSLSYRPMMVTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVF 78
+R +L RP +T+ TP + +W S+ DI A+L+Q + +KEP+EVYEPM F
Sbjct: 19 RQARSALPVRPTPLTI--PTP---QLHWASLQADIEAYLKQTIPLKEPLEVYEPMHRLAF 73
Query: 79 AAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPT 138
AAP + APALC+AACELVGG R QA+ AAAAL + A + HE + + +
Sbjct: 74 AAPRSTAPALCLAACELVGGQRRQAMDAAAALLLNLANAHAHEEIGQGEGS--------- 124
Query: 139 MYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQY 198
N LL D ++PFG ELLA P + R++RV++E++RA+GS G++
Sbjct: 125 -------NVALLTGDGIVPFGFELLARGAGPGRGSPERVMRVIIEISRAVGSGGLI---- 173
Query: 199 NELQCSQCDDDDRKLNGITDVEMTYETYKK---KEGRLHACGAACGAILGGGSEKEIELL 255
+ LQ + VE E+ K+ +EG LHA GA GA++GGGSE IE +
Sbjct: 174 DSLQMKK------------SVEGEVESVKRVWXREGGLHAWGAPLGAVVGGGSEGGIERV 221
Query: 256 RRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVNSFNDENAEVIFSL 306
RR+GFYVGM++G R L E +EE + L L+ + F + +IF
Sbjct: 222 RRFGFYVGMMRGKAPRGLS-KENVEEPRNLG--LKGLPLFKGPDFSIIFPF 269
>gi|297744549|emb|CBI37811.3| unnamed protein product [Vitis vinifera]
Length = 1187
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 157/306 (51%), Gaps = 31/306 (10%)
Query: 6 SVLNLPAHVAPRRNHSRPSLSYRPMMVTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKE 65
S LNLP + + PS+S P + S +SYWT++ +I L +A+ VK
Sbjct: 280 SSLNLPRTI----RCTSPSISVSP-----SKSMQFDLRSYWTTLISEINTKLEEAIPVKY 330
Query: 66 PVEVYEPMRHFVFAAPVNMAP-ALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLP 124
P ++YE MR+ V A AP +CVA CEL GG R A A AL ++HAAS IH++LP
Sbjct: 331 PQQIYEAMRYSVLAKGGKRAPPVMCVAVCELFGGDRLAAFPTACALEMVHAASLIHDDLP 390
Query: 125 LSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEM 184
D + +P+ + + + +L DA+ P G + S G+++RV+ E+
Sbjct: 391 CMDDDP-SRRGQPSNHTVYGVDMAILAGDALFPLGFRHIVSHTPSHLVPEGQLIRVIAEI 449
Query: 185 TRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAIL 244
R++GS G+ GQ+ +L+ + N + V+ +KK G + C A CG L
Sbjct: 450 ARSVGSTGMAAGQFLDLEGAP--------NSVDFVQ------RKKFGEMAECSAVCGGFL 495
Query: 245 GGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVNSFNDENAEVI- 303
GG ++ +I LRRYG VGM+ +V + E EEL+ A RE++ F+ V+
Sbjct: 496 GGAADDDILRLRRYGRAVGMLYQVVDDK--AMEVAEELRAKA--KRELSGFDKYGDSVVP 551
Query: 304 -FSLVD 308
+S VD
Sbjct: 552 LYSFVD 557
>gi|374639383|gb|AEZ55680.1| geranyl diphosphate synthase small subunit type II.2 [Salvia
miltiorrhiza]
Length = 331
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 142/263 (53%), Gaps = 22/263 (8%)
Query: 21 SRPSLSYRPMMVTMAMSTPNKN-KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFA 79
+RP+L R + + A +P + K+YWTS+ ++I L +A+ VK P ++YE MR+ V A
Sbjct: 19 TRPALR-RTIRCSAASVSPGFDLKTYWTSLIKEIDQKLDEAIPVKYPQQIYEAMRYSVLA 77
Query: 80 APVNMAP-ALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPT 138
AP +CVAACE+ GG+R A A AL ++H+AS IH++LP D + +P+
Sbjct: 78 KGAKRAPPVMCVAACEIFGGNRLAAFPTACALEMVHSASLIHDDLPCMDDDP-SRRGQPS 136
Query: 139 MYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQY 198
+ F + +L DA+ P G + S R+LRV+ E+ RA+GS G+ GQ+
Sbjct: 137 NHTVFGVDMAILAGDALFPLGFRHIVSHTPTDLVPHTRLLRVIAEIARAVGSTGMAAGQF 196
Query: 199 NELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRY 258
+L+ G V++ E KK G + C A CG +L G S+ EIE LR+Y
Sbjct: 197 LDLE-----------GGPNAVDLVQE---KKFGEMGQCSAVCGGLLAGASDDEIEHLRKY 242
Query: 259 GFYVGMIQGIVS----RRLGPTE 277
G VG++ +V +L P E
Sbjct: 243 GRAVGILYEVVDDIRETKLQPDE 265
>gi|325516286|gb|ADZ24721.1| geranylgeranyl pyrophosphate synthase 4 [Solanum pennellii]
Length = 334
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 132/243 (54%), Gaps = 23/243 (9%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAP-ALCVAACELVGGHRE 101
K+YWT++ DI L +AV VK P ++YE MR+ V A +P +CVAACEL GG+R
Sbjct: 44 KTYWTTLIVDINQKLDEAVPVKYPNQIYEAMRYSVLAKGAKRSPPIMCVAACELFGGNRL 103
Query: 102 QAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE 161
A A AL ++HAAS IH++LP D + + P + F + +L DA+ P G +
Sbjct: 104 AAFPTACALEMVHAASLIHDDLPCMDDDT-TRRGLPANHTVFGVDMAILAGDALFPLGFQ 162
Query: 162 LLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEM 221
+ S RILRV+ E+ RA+GS G+ GQ+ +L+ G V+
Sbjct: 163 HIVSHTPSDLVPEDRILRVITEIARAVGSTGMAAGQFLDLE-----------GGPNAVDF 211
Query: 222 TYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEE 281
E KK G + C A CGA+L G S++EI+ +R+YG VG++ +V ++I E
Sbjct: 212 VQE---KKYGEMGECSAVCGALLAGASDEEIQHMRKYGRAVGVLYRVV-------DDILE 261
Query: 282 LKK 284
KK
Sbjct: 262 AKK 264
>gi|356559416|ref|XP_003547995.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Glycine max]
Length = 367
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 87/246 (35%), Positives = 133/246 (54%), Gaps = 11/246 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K+Y S + L AV ++EP +++E MR+ + A + P LCVAACELVGG
Sbjct: 77 KNYMVSKASAVNKALDDAVSLREPQKIHEAMRYSLLAGGKRVRPVLCVAACELVGGEEAT 136
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ AA A+ ++H S IH++LP D L + KPT + F + +L DA+L F E
Sbjct: 137 AMPAACAIEMIHTMSLIHDDLPCMDNDDL-RRGKPTNHKVFGEDVAVLAGDALLAFAFEH 195
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+A+S G + GRI+R + E+ R++GS+G+V GQ ++ D D+E
Sbjct: 196 IAASTR--GASPGRIVRAIGELARSIGSEGLVAGQVVDINSEGLAD--------VDLERL 245
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
+ K L GAILGGG++ E+E LR++ Y+G++ +V L T+ +EL
Sbjct: 246 EFIHVHKTAALLEGAVVLGAILGGGTDDEVEKLRKFARYIGLLFQVVDDILDVTKSSQEL 305
Query: 283 KKLAFK 288
K A K
Sbjct: 306 GKTAGK 311
>gi|297797830|ref|XP_002866799.1| hypothetical protein ARALYDRAFT_912293 [Arabidopsis lyrata subsp.
lyrata]
gi|297312635|gb|EFH43058.1| hypothetical protein ARALYDRAFT_912293 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 86/224 (38%), Positives = 118/224 (52%), Gaps = 16/224 (7%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMA-PALCVAACELVGGHRE 101
++YWT++ +I L +A+ VK P +YE MR+ V A A P +CVAACEL GG R
Sbjct: 37 RTYWTTLITEINQKLDEAIPVKHPAGIYEAMRYSVLAQGAKRASPVMCVAACELFGGDRL 96
Query: 102 QAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE 161
A A AL ++HAAS IH++LP D + + KP+ + + LL DA+ P G
Sbjct: 97 AAFPTACALEMVHAASLIHDDLPCMDDDP-VRRGKPSNHTVYGSGIALLAGDALFPLGFH 155
Query: 162 LLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEM 221
+ S P ILRV+ E+ R +GS G+ GQY +L+ G
Sbjct: 156 HIVSHTPPELVPRATILRVIAEIARTVGSTGMAAGQYVDLE-----------GGPFPPSF 204
Query: 222 TYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
E KK G + C A CG +LGG +E E+E LRRYG VGM+
Sbjct: 205 VQE---KKFGAMGECSAVCGGLLGGATEDELESLRRYGRAVGML 245
>gi|735880|gb|AAA81879.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
Length = 326
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 86/246 (34%), Positives = 128/246 (52%), Gaps = 23/246 (9%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFA-APVNMAPALCVAACELVGGHRE 101
++YWT++ +I L +A+ VK P +YE MR+ V P P +CVAACEL GG R
Sbjct: 48 RTYWTTLITEINQKLDEAIPVKHPAGIYEAMRYSVLPQGPKRAPPVMCVAACELFGGDRL 107
Query: 102 QAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE 161
A A AL ++HAAS IH++LP D + + KP+ + + +L DA+ P +
Sbjct: 108 AAFPTACALEMVHAASLIHDDLPCMDDDP-VRRGKPSNHTVYGSGMAILAGDALFPLAFQ 166
Query: 162 LLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEM 221
+ S P ILR++ E+ R +GS G+ GQY +L+ G +
Sbjct: 167 HIVSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDLE-----------GGPFPLSF 215
Query: 222 TYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEE 281
E KK G + C A CG +LGG +E E++ LRRYG VGM+ +V ++I E
Sbjct: 216 VQE---KKFGAMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVV-------DDITE 265
Query: 282 LKKLAF 287
KK ++
Sbjct: 266 DKKKSY 271
>gi|15233848|ref|NP_195558.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
gi|85680919|sp|Q39108.2|GGR_ARATH RecName: Full=Heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic; Flags: Precursor
gi|11908118|gb|AAG41488.1|AF326906_1 putative geranylgeranyl pyrophosphate synthase-related protein
[Arabidopsis thaliana]
gi|12642930|gb|AAK00407.1|AF339725_1 putative geranylgeranyl pyrophosphate synthase-related protein
[Arabidopsis thaliana]
gi|13926334|gb|AAK49631.1|AF372915_1 AT4g38460/F20M13_20 [Arabidopsis thaliana]
gi|4467133|emb|CAB37502.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
gi|7270829|emb|CAB80510.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
gi|16323260|gb|AAL15364.1| AT4g38460/F20M13_20 [Arabidopsis thaliana]
gi|21555524|gb|AAM63877.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
gi|332661530|gb|AEE86930.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
Length = 326
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 87/246 (35%), Positives = 129/246 (52%), Gaps = 23/246 (9%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAP-ALCVAACELVGGHRE 101
++YWT++ +I L +A+ VK P +YE MR+ V A AP +CVAACEL GG R
Sbjct: 48 RTYWTTLITEINQKLDEAIPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFGGDRL 107
Query: 102 QAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE 161
A A AL ++HAAS IH++LP D + + KP+ + + +L DA+ P +
Sbjct: 108 AAFPTACALEMVHAASLIHDDLPCMDDDP-VRRGKPSNHTVYGSGMAILAGDALFPLAFQ 166
Query: 162 LLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEM 221
+ S P ILR++ E+ R +GS G+ GQY +L+ G +
Sbjct: 167 HIVSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDLE-----------GGPFPLSF 215
Query: 222 TYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEE 281
E KK G + C A CG +LGG +E E++ LRRYG VGM+ +V ++I E
Sbjct: 216 VQE---KKFGAMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVV-------DDITE 265
Query: 282 LKKLAF 287
KK ++
Sbjct: 266 DKKKSY 271
>gi|11692820|gb|AAG40013.1|AF324662_1 AT4g38460 [Arabidopsis thaliana]
Length = 326
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/246 (35%), Positives = 129/246 (52%), Gaps = 23/246 (9%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAP-ALCVAACELVGGHRE 101
++YWT++ +I L +A+ VK P +YE MR+ V A AP +CVAACEL GG R
Sbjct: 48 RTYWTTLITEINQKLDEAIPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFGGDRL 107
Query: 102 QAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE 161
A A AL ++HAAS IH++LP D + + KP+ + + +L DA+ P +
Sbjct: 108 AAFPTACALEMVHAASLIHDDLPCMDDDP-VRRGKPSNHTVYGSGMAILAGDALFPLAFQ 166
Query: 162 LLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEM 221
+ S P ILR++ E+ R +GS G+ GQY +L+ G +
Sbjct: 167 HIVSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDLE-----------GGPFPLSF 215
Query: 222 TYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEE 281
E KK G + C A CG +LGG +E E++ LRRYG VGM+ +V ++I E
Sbjct: 216 VQE---KKFGAMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVV-------DDITE 265
Query: 282 LKKLAF 287
KK ++
Sbjct: 266 DKKKSY 271
>gi|121145|sp|P80042.1|GGPPS_CAPAN RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
Short=GGPP synthase; Short=GGPS; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|643094|emb|CAA56554.1| geranylgeranyl diphosphate synthase [Capsicum annuum]
Length = 369
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 148/290 (51%), Gaps = 27/290 (9%)
Query: 12 AHVAPRRNHSRPSLSYRPMMVTMAMST-------------PNKNKSYWTSVHEDIGAHLR 58
+ + P+ N RP + P+ V+ +T P K Y T + L
Sbjct: 38 SKINPKLNKKRP---FSPLTVSAIATTKEDERIEAAQTEEPFNFKIYVTEKAISVNKALD 94
Query: 59 QAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASF 118
+A++VKEP ++E MR+ + A + P LC+AACELVGG++E A+ AA A+ ++H S
Sbjct: 95 EAIIVKEPHVIHEAMRYSLLAGGKRVRPMLCLAACELVGGNQENAMAAACAVEMIHTMSL 154
Query: 119 IHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRIL 178
IH++LP D L + KPT + + + +L D++L F E + +S AG RI+
Sbjct: 155 IHDDLPCMDNDDL-RRGKPTNHKIYGEDVAVLAGDSLLAFAFEHIVNS--TAGVTPSRIV 211
Query: 179 RVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGA 238
+ E+ +++G++G+V GQ +++C+ N +E + K L
Sbjct: 212 GAVAELAKSIGTEGLVAGQVADIKCTG--------NASVSLETLEFIHVHKTAALLESSV 263
Query: 239 ACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GAILGGG+ E+E LRR+ +G++ +V L T+ EEL K A K
Sbjct: 264 VLGAILGGGTNVEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGK 313
>gi|356498416|ref|XP_003518048.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Glycine max]
Length = 350
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 135/248 (54%), Gaps = 15/248 (6%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K+Y S + L +V ++EP +++E MR+ + A + P LCVAACELVGGH
Sbjct: 60 KNYMLSKASAVNKALDDSVSLREPKKIHEAMRYSLLAGGKRVRPVLCVAACELVGGHEAT 119
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ AA AL ++H S IH++LP D L + KPT + F + +L DA+L F E
Sbjct: 120 AMPAACALEMIHTMSLIHDDLPCMDNDDL-RRGKPTNHTVFGEDVAVLAGDALLAFAFEH 178
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDV--E 220
+A+S G ++ RILR + E+ R++GS+G+V GQ ++ G+ DV E
Sbjct: 179 IAASTR--GASAPRILRAIGELARSIGSEGLVAGQVVDINS----------EGLADVGLE 226
Query: 221 MTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
+ K L GAILGGG++ E+E LR++ Y+G++ +V L T+ +
Sbjct: 227 RLEFIHVHKTAALLEGAVVLGAILGGGTDDEVEKLRKFARYIGLLFQVVDDILDVTKSSQ 286
Query: 281 ELKKLAFK 288
EL K A K
Sbjct: 287 ELGKTAGK 294
>gi|224103129|ref|XP_002312936.1| predicted protein [Populus trichocarpa]
gi|222849344|gb|EEE86891.1| predicted protein [Populus trichocarpa]
Length = 314
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 141/269 (52%), Gaps = 28/269 (10%)
Query: 29 PMMVTMAMSTPNKN-----KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVN 83
P+ ++++ST +K K+YWT++ +I L QAV ++ P ++YE MR+ V A
Sbjct: 3 PIQCSLSVSTHSKTPQFDLKTYWTTLILEINQKLDQAVPIQYPDKIYEAMRYSVLAKGAK 62
Query: 84 MAP-ALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHA 142
AP +CVAACEL GG+R A A AL ++H+AS IH++LP D + +P+ +
Sbjct: 63 RAPPVMCVAACELFGGNRHAAFPTACALEMVHSASLIHDDLPCMDDDP-SRRGQPSNHKI 121
Query: 143 FKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQ 202
+ + +L DA+ P G + S R+L V+ E+ RA+GS G+ GQ+ +L+
Sbjct: 122 YGVDMAILAGDALFPLGFRHIVSHTPSDLVPEPRLLSVIAEIARAVGSTGMAAGQFLDLE 181
Query: 203 CSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYV 262
G VE E KK G + C A CG +L G + EI+ LRRYG V
Sbjct: 182 -----------GGPNSVEFVQE---KKFGEMGECSAVCGGLLAGAKDDEIQRLRRYGRAV 227
Query: 263 GMIQGIVSRRLGPTEEIEELKKLAFKLRE 291
G++ +V ++I E K + K+ E
Sbjct: 228 GVLYQVV-------DDILEAKTMKSKVDE 249
>gi|295322739|gb|ADG01841.1| geranylgeranyl-diphosphate synthase [Medicago sativa]
Length = 370
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 151/289 (52%), Gaps = 23/289 (7%)
Query: 10 LPAHVAPRRNHSRPSLSYRPMMVTMAM-------STPNKN-KSYWTSVHEDIGAHLRQAV 61
+P V+P + S+P+ S+ + + P N KSY + L AV
Sbjct: 39 IPISVSPIKPSSKPNSSFSVLSLLTKQEPIEAEEQNPIFNFKSYMIEKATRVNKALDDAV 98
Query: 62 VVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHE 121
++EP++V+E MR+ + A + P LC+AACELVGG A+ AA A+ ++H S IH+
Sbjct: 99 SLREPLKVHEAMRYSLLAGGKRVRPVLCLAACELVGGTEPMAMPAACAVEMIHTMSLIHD 158
Query: 122 NLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVM 181
+LP D L + KPT + F + +L DA+L F E +A S AG + RI+R +
Sbjct: 159 DLPCMDNDDL-RRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAVS--TAGVSPARIVRAI 215
Query: 182 VEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDV--EMTYETYKKKEGRLHACGAA 239
E+ +++GS+G+V GQ ++ G++DV E + K L
Sbjct: 216 GELAKSIGSEGLVAGQVVDINS----------EGLSDVGLEQLEFIHLHKTAALLEGAVV 265
Query: 240 CGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GAILGGGS++++E LR++ Y+G++ +V L T+ +EL K A K
Sbjct: 266 LGAILGGGSDEDVEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGK 314
>gi|226510660|gb|ACO59905.1| geranylgeranyl pyrophosphate synthase [Elaeagnus umbellata]
Length = 365
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/248 (36%), Positives = 135/248 (54%), Gaps = 15/248 (6%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K+Y + L AV +KEP +++E MR+ + A + P LC+AACELVGGH
Sbjct: 75 KAYMIEKGHSVNQALDSAVALKEPEKIHEAMRYSLLAGGKRVRPVLCLAACELVGGHESM 134
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ AA A+ ++H S IH++LP D L + KPT + F +L DA+L F E
Sbjct: 135 AMPAACAVEMIHTMSLIHDDLPCMDNDDL-RRGKPTNHKVFGEEVAVLAGDALLAFAFEH 193
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDV--E 220
+A S G ++ RI+R + E+ +++GS+G+V GQ ++ CS+ G++DV E
Sbjct: 194 IAVS--TVGVSTARIVRSIGELAKSIGSEGLVAGQVVDI-CSE---------GLSDVGLE 241
Query: 221 MTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
+ K L GAILGGGS+ EIE LR + Y+G++ +V L T+ +
Sbjct: 242 QLEFIHVHKTAALLEASVVLGAILGGGSDIEIEKLRMFARYIGLLFQVVDDILDVTKSSQ 301
Query: 281 ELKKLAFK 288
EL K A K
Sbjct: 302 ELGKTAGK 309
>gi|164605014|dbj|BAF98303.1| geranylgeranyl-diphosphate synthase [Hevea brasiliensis]
Length = 306
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 127/234 (54%), Gaps = 16/234 (6%)
Query: 37 STPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAP-ALCVAACEL 95
ST K+YW ++ +I L QA+ ++ P E+YE MR+ V A AP +C+AACEL
Sbjct: 9 STQFDLKTYWMTLISEINQKLDQAIPIQYPEEIYEAMRYSVLAKRTKRAPPVMCIAACEL 68
Query: 96 VGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAM 155
GG+R A A AL ++HAAS IH++LP D + +P+ + + + +L DA+
Sbjct: 69 FGGNRLAAFPTACALEMVHAASLIHDDLPCMDDAP-SRRGQPSNHAVYGVDKAILAGDAL 127
Query: 156 LPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNG 215
P G + S+ R+LRV+ E+ RA+GS G+ GQ+ +L+ S LN
Sbjct: 128 FPLGFRHIVSNTPSDLVPEPRLLRVIAEIARAVGSTGMAAGQFLDLEGS--------LNS 179
Query: 216 ITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIV 269
V+ +KK G + C A CG +L G + EI+ LRRYG VG++ ++
Sbjct: 180 AEFVQ------EKKYGEMGECSAVCGGLLAGAEDDEIQRLRRYGRAVGVLYKVI 227
>gi|359474991|ref|XP_003631563.1| PREDICTED: geranylgeranyl pyrophosphate synthase-related protein,
chloroplastic-like isoform 1 [Vitis vinifera]
Length = 341
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 138/265 (52%), Gaps = 25/265 (9%)
Query: 6 SVLNLPAHVAPRRNHSRPSLSYRPMMVTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKE 65
S LNLP + + PS+S P + S +SYWT++ +I L +A+ VK
Sbjct: 23 SSLNLPRTI----RCTSPSISVSP-----SKSMQFDLRSYWTTLISEINTKLEEAIPVKY 73
Query: 66 PVEVYEPMRHFVFAAPVNMAP-ALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLP 124
P ++YE MR+ V A AP +CVA CEL GG R A A AL ++HAAS IH++LP
Sbjct: 74 PQQIYEAMRYSVLAKGGKRAPPVMCVAVCELFGGDRLAAFPTACALEMVHAASLIHDDLP 133
Query: 125 LSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEM 184
D + +P+ + + + +L DA+ P G + S G+++RV+ E+
Sbjct: 134 CMDDDP-SRRGQPSNHTVYGVDMAILAGDALFPLGFRHIVSHTPSHLVPEGQLIRVIAEI 192
Query: 185 TRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAIL 244
R++GS G+ GQ+ +L+ + N + V+ +KK G + C A CG L
Sbjct: 193 ARSVGSTGMAAGQFLDLEGAP--------NSVDFVQ------RKKFGEMAECSAVCGGFL 238
Query: 245 GGGSEKEIELLRRYGFYVGMIQGIV 269
GG ++ +I LRRYG VGM+ +V
Sbjct: 239 GGAADDDILRLRRYGRAVGMLYQVV 263
>gi|297802274|ref|XP_002869021.1| hypothetical protein ARALYDRAFT_490952 [Arabidopsis lyrata subsp.
lyrata]
gi|297314857|gb|EFH45280.1| hypothetical protein ARALYDRAFT_490952 [Arabidopsis lyrata subsp.
lyrata]
Length = 379
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 135/245 (55%), Gaps = 7/245 (2%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
SY + E + L AV ++EP++++E MR+ + A + P LC+AACELVGG A
Sbjct: 86 SYIITKAESVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTA 145
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ AA A+ ++H S IH++LP D L + KPT + F + +L DA+L F E L
Sbjct: 146 MPAACAVEMIHTMSLIHDDLPCMDNDDL-RRGKPTNHKVFGEDVAVLAGDALLSFAFEHL 204
Query: 164 ASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTY 223
AS+ + + R++R + E+ +A+G++G+V GQ ++ D +D L + + +
Sbjct: 205 ASATSSDVVSPVRVVRAIGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHL-- 262
Query: 224 ETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELK 283
K L A GAI+GGGS+ EIE LR++ +G++ +V L T+ +EL
Sbjct: 263 ----HKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELG 318
Query: 284 KLAFK 288
K A K
Sbjct: 319 KTAGK 323
>gi|225430848|ref|XP_002273789.1| PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic
[Vitis vinifera]
Length = 368
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 99/293 (33%), Positives = 151/293 (51%), Gaps = 33/293 (11%)
Query: 16 PRRNHSRPSLSYR---PMMVTMAMS---------TPNKNK------SYWTSVHEDIGAHL 57
P +N S P LS R PM + ++ TP + K +Y + L
Sbjct: 33 PLKNPSFPMLSQRSGRPMSLVAVLTKEEMVRGGDTPEEEKPAFNFNAYILDKANSVNKAL 92
Query: 58 RQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAAS 117
AV ++EPV+V+E MR+ + A + P LC+AACELVGG A+ AA A+ ++H S
Sbjct: 93 DDAVPIREPVKVHESMRYSLLAGGKRVRPVLCIAACELVGGDEATAMPAACAVEMIHTMS 152
Query: 118 FIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRI 177
+H++LP D L + KPT + F N +L DA+L F E +A++ G G I
Sbjct: 153 LMHDDLPCMDNDDL-RRGKPTNHKVFGENVAILAGDALLAFAFEHMATA--TVGVPPGWI 209
Query: 178 LRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETY--KKKEGRLHA 235
+R + E+ +++GS+G+V GQ ++ CS+ G+ DV + + Y K L
Sbjct: 210 VRAVGELAKSIGSEGLVAGQVVDI-CSE---------GLKDVGLEHLEYIHVHKTAALLE 259
Query: 236 CGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GAILGGGS +EIE LR++ +G++ +V L T+ +EL K A K
Sbjct: 260 GAVVLGAILGGGSNEEIEKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGK 312
>gi|34484306|gb|AAQ72786.1| geranylgeranyl diphosphate synthase [Ginkgo biloba]
gi|157072687|gb|ABV08866.1| geranylgeranyl diphosphate synthase [Ginkgo biloba]
gi|157072689|gb|ABV08867.1| geranylgeranyl diphosphate synthase [Ginkgo biloba]
Length = 391
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 146/283 (51%), Gaps = 20/283 (7%)
Query: 14 VAPRRNHSRPSLSYRPMMVTMAMSTPNKN------KSYWTSVHEDIGAHLRQAVVVKEPV 67
++ R S SL+ +V+ A + K K Y S + L +AV P
Sbjct: 65 LSSRGVMSSGSLNTVAQLVSEAETVKEKKDFEFDFKKYMYSKAISVNEALDKAVPTHYPE 124
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
+++E MR+ + A + P LC+AACELVGG + A+ AA A+ ++H + IH++LP D
Sbjct: 125 KIHESMRYSLLAGGKRVRPTLCIAACELVGGTEDLAMPAACAMEMIHTMTLIHDDLPCMD 184
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
+L + KPT + AF +T +L DA+L F E +A S + S R+LRV+ E+ ++
Sbjct: 185 NDNL-RRGKPTNHKAFGEDTAVLAGDALLSFAFEHIARSTSKT-VESERVLRVICELGKS 242
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETY--KKKEGRLHACGAACGAILG 245
MGS+G+V GQ ++ G T V++ Y K L C GAI+G
Sbjct: 243 MGSEGLVAGQIVDIAS----------EGDTSVDLKTLEYIHLHKTAVLLECSVVSGAIIG 292
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
G SE+EIE RRY VG++ +V L T+ EEL K A K
Sbjct: 293 GASEEEIERTRRYARCVGLLFQVVDDILDVTKTSEELGKTAGK 335
>gi|15234534|ref|NP_195399.1| geranylgeranyl pyrophosphate synthase 11 [Arabidopsis thaliana]
gi|13432144|sp|P34802.2|GGPP1_ARATH RecName: Full=Heterodimeric geranylgeranyl pyrophosphate synthase
large subunit 1, chloroplastic; Short=GGPP synthase 1;
Short=GGPS1; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase 1; AltName: Full=Dimethylallyltranstransferase
1; AltName: Full=Farnesyl diphosphate synthase 1;
AltName: Full=Farnesyltranstransferase 1; AltName:
Full=Geranyltranstransferase 1; Flags: Precursor
gi|2464899|emb|CAB16803.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|7270630|emb|CAB80347.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|110742524|dbj|BAE99179.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|332661305|gb|AEE86705.1| geranylgeranyl pyrophosphate synthase 11 [Arabidopsis thaliana]
Length = 371
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 135/245 (55%), Gaps = 7/245 (2%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
SY + E + L AV ++EP++++E MR+ + A + P LC+AACELVGG A
Sbjct: 78 SYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTA 137
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ AA A+ ++H S IH++LP D L + KPT + F + +L DA+L F E L
Sbjct: 138 MPAACAVEMIHTMSLIHDDLPCMDNDDL-RRGKPTNHKVFGEDVAVLAGDALLSFAFEHL 196
Query: 164 ASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTY 223
AS+ + + R++R + E+ +A+G++G+V GQ ++ D +D L + + +
Sbjct: 197 ASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHL-- 254
Query: 224 ETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELK 283
K L A GAI+GGGS+ EIE LR++ +G++ +V L T+ +EL
Sbjct: 255 ----HKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELG 310
Query: 284 KLAFK 288
K A K
Sbjct: 311 KTAGK 315
>gi|225458370|ref|XP_002283364.1| PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic
[Vitis vinifera]
Length = 371
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 137/251 (54%), Gaps = 11/251 (4%)
Query: 38 TPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVG 97
TP K Y + L +AV VK P++++E MR+ + A + PALC+AACELVG
Sbjct: 76 TPFSFKDYMIQKASSVHKALDEAVYVKSPIKIHEAMRYSLLAGGKRVRPALCLAACELVG 135
Query: 98 GHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLP 157
G A+ AA A+ ++H S IH++LP D L + KPT + F + +L D++L
Sbjct: 136 GDESNAMPAACAVEMIHTMSLIHDDLPCMDNDDL-RRGKPTNHKVFGEDVAVLAGDSLLA 194
Query: 158 FGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGIT 217
F E LA++ +G +S RI+ + E+ +++G++G+V GQ ++ + D G+
Sbjct: 195 FAFEHLATA--TSGVSSSRIVAAVGELAKSIGAEGLVAGQVVDISSTGQSD-----VGLD 247
Query: 218 DVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTE 277
+E + K L GA+LGGGS++E+E LR+Y VG++ +V L T+
Sbjct: 248 QLEF---IHIHKTAALLEAAVVLGALLGGGSDEEVEKLRKYARQVGLLFQVVDDILDVTK 304
Query: 278 EIEELKKLAFK 288
+EL K A K
Sbjct: 305 SSQELGKTAGK 315
>gi|255577858|ref|XP_002529802.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223530713|gb|EEF32584.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
Length = 345
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 136/270 (50%), Gaps = 26/270 (9%)
Query: 11 PAHVAPRRN---HSRPSLSYRPMMVTMAMSTPNKNKS-------YWTSVHEDIGAHLRQA 60
PA PR+ H L R + +S +++KS YWT++ +I L QA
Sbjct: 13 PALYLPRKTPNVHHLSKLGIRIQCCSPTVSVSSQSKSTQFDLKTYWTTLIAEINQKLDQA 72
Query: 61 VVVKEPVEVYEPMRHFVFAAPVNMAP-ALCVAACELVGGHREQAIVAAAALHVMHAASFI 119
+ V+ P ++YE MR+ A AP +CVAACEL GG+R A A AL ++H AS I
Sbjct: 73 IPVQFPEQIYEAMRYSALAKGAKRAPPVMCVAACELFGGNRLAAFPTACALEMVHTASLI 132
Query: 120 HENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILR 179
H++LP D + +P+ + + + +L DA+ P G + S R+LR
Sbjct: 133 HDDLPCMDDDP-SRRGQPSNHTIYGVDMAILAGDALFPLGYRHIVSHTPTGLVPEPRLLR 191
Query: 180 VMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAA 239
V+ E+ RA+GS G+ GQ+ +L+ G + VE E KK G + C A
Sbjct: 192 VIAEIARAVGSTGMAAGQFLDLE-----------GGPSFVEFAQE---KKYGEMSECSAV 237
Query: 240 CGAILGGGSEKEIELLRRYGFYVGMIQGIV 269
CG +L G + EI+ LRRYG VG++ ++
Sbjct: 238 CGGLLAGAEDDEIQRLRRYGRAVGVLYQVI 267
>gi|388496908|gb|AFK36520.1| unknown [Medicago truncatula]
Length = 342
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 133/263 (50%), Gaps = 31/263 (11%)
Query: 29 PMMVTMAMSTPNKN-----------KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFV 77
P+ +MA +P+ K+YWTS+ I L +A+ V+ P ++YE MR+
Sbjct: 26 PIRCSMAAPSPSSVSIRSKVVHFDLKTYWTSLMTQINQKLDEAIEVQFPQQIYEAMRYSA 85
Query: 78 FAAPVNMAP-ALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSK 136
A +P +C++ACEL GG R A A AL ++HAAS IH++LP D SL + +
Sbjct: 86 LAKGAKRSPPVMCISACELFGGSRLAAFPTACALEMVHAASLIHDDLPCMD-DSLSRRGQ 144
Query: 137 PTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEG 196
P+ + + + +L DA+ P G + + S R+LRV+ E+ R +GS G+ G
Sbjct: 145 PSNHTIYGVDMAILAGDALFPLGFQHIVSHTPSDLVPEPRVLRVIAEIARCVGSTGMAAG 204
Query: 197 QYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLR 256
Q+ +L+ G V + + KK G + C A CG +L G + EIE LR
Sbjct: 205 QFLDLK-----------GGPNAVGLIQD---KKFGEMAECSAVCGGLLAGAEDDEIERLR 250
Query: 257 RYGFYVGMIQGIVS----RRLGP 275
RYG VG++ IV RL P
Sbjct: 251 RYGRAVGVLYAIVDDILEERLKP 273
>gi|168203181|gb|ACA21461.1| geranylgeranyl diphosphate synthase 5 [Picea abies]
gi|224285639|gb|ACN40538.1| unknown [Picea sitchensis]
Length = 382
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/246 (35%), Positives = 129/246 (52%), Gaps = 10/246 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K Y S + L +AV ++ P +++E MR+ + A + P LC+AACELVGG +
Sbjct: 91 KEYLLSKAMAVNEALDRAVQLRYPEKIHEAMRYSLLAGGKRVRPVLCIAACELVGGTEKL 150
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ A A+ ++H S IH++LP D + KPT + F T +L DA+L F E
Sbjct: 151 AMPTACAMEMIHTMSLIHDDLPCMDNDDF-RRGKPTNHKVFGEGTAVLAGDALLSFAFEH 209
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+A S + + S RILRV+ E+ R +GSQG+V GQ ++ N D++
Sbjct: 210 IAVSTSKS-VGSDRILRVVSELGRTIGSQGLVGGQVADITSEG--------NASVDLDTL 260
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
+ K L C CGAI+ G SE EIE ++RY VG++ +V L T+ +EL
Sbjct: 261 EWIHIHKTAVLLECSVVCGAIISGASENEIERVKRYARSVGLLFQVVDDILDVTKSSKEL 320
Query: 283 KKLAFK 288
K A K
Sbjct: 321 GKTAGK 326
>gi|148279681|gb|ABQ53935.1| geranylgeranyl pyrophosphate synthase [Nicotiana attenuata]
Length = 366
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 134/246 (54%), Gaps = 11/246 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K+Y + L +AV+VK+P +YE MR+ + A + P LC+AACELVGG +
Sbjct: 76 KTYVAEKAISVNKALDEAVIVKDPPVIYEAMRYSLLAGGKRVRPMLCLAACELVGGDQSN 135
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ AA A+ ++H S IH++LP D I + KPT + + + +L D++L F E
Sbjct: 136 AMPAACAVEMIHTMSLIHDDLPCMDNDD-IRRGKPTNHKVYGEDVAVLAGDSLLAFAFEF 194
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+A++ AG + RIL + E+ +++G++G+V GQ ++ C+ N ++
Sbjct: 195 IATA--TAGVSPSRILAAIGELAKSIGTEGLVAGQVADIACTG--------NPNVGLDTL 244
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
+ K L GAILGGG+++E+E LRR+ +G++ +V L T+ EEL
Sbjct: 245 EFIHIHKTAALLEASVVLGAILGGGTDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEEL 304
Query: 283 KKLAFK 288
K A K
Sbjct: 305 GKTAGK 310
>gi|116831085|gb|ABK28497.1| unknown [Arabidopsis thaliana]
Length = 348
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 134/247 (54%), Gaps = 14/247 (5%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
SY + L AV ++EP++++E +R+ + A + P LC+AACELVGG A
Sbjct: 57 SYMIGKANAVNEALDSAVSLREPIKIHEAIRYSLLARGKRVRPVLCIAACELVGGEESVA 116
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ AA A+ ++H S IH++LP D L + KPT + F + +L DA++ F E L
Sbjct: 117 LPAACAVEMIHTMSLIHDDLPCMDNDDL-RRGKPTNHKVFGEDVAVLAGDALISFAFEHL 175
Query: 164 ASSD--NPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEM 221
A+S +PA R++R + E+ +A+GS+G+V GQ +L D +D L E+
Sbjct: 176 ATSTAVSPA-----RVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGL------EV 224
Query: 222 TYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEE 281
+ K L GAI+GGGS++E+E LRR+ +G++ +V L T+ EE
Sbjct: 225 LEFIHVHKTAVLLEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEE 284
Query: 282 LKKLAFK 288
L K A K
Sbjct: 285 LGKTAGK 291
>gi|147776976|emb|CAN70079.1| hypothetical protein VITISV_001037 [Vitis vinifera]
Length = 341
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 125/232 (53%), Gaps = 16/232 (6%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAP-ALCVAACELVGGHRE 101
+SYWT++ +I L +A+ VK P ++YE MR+ V A AP +CVA CEL GG R
Sbjct: 51 RSYWTTLISEINTKLEEAIPVKYPQQIYEAMRYSVLAKGGKRAPPVMCVAVCELFGGDRL 110
Query: 102 QAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE 161
A A AL ++HAAS IH++LP D + +P+ + + + +L DA+ P G
Sbjct: 111 AAFPTACALEMVHAASLIHDDLPCMDDDP-SRRGQPSNHTVYGVDMAILAGDALFPLGFR 169
Query: 162 LLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEM 221
+ S G+++RV+ E+ R++GS G+ GQ+ +L+ + N + V+
Sbjct: 170 HIVSHTPSHLVPEGQLIRVIAEIARSVGSTGMAAGQFLDLEGAP--------NSVDFVQ- 220
Query: 222 TYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRL 273
+KK G + C A CG LGG ++ +I LRRYG VGM+ +V L
Sbjct: 221 -----RKKFGEMAECSAVCGGFLGGAADDDILRLRRYGRAVGMLYQVVDDML 267
>gi|15224197|ref|NP_179452.1| geranylgeranyl diphosphate synthase 7 [Arabidopsis thaliana]
gi|75268021|sp|Q9ZU77.1|GGPP7_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 7,
chloroplastic; Short=GGPP synthase 7; Short=GGPS7;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 7;
AltName: Full=Dimethylallyltranstransferase 7; AltName:
Full=Farnesyl diphosphate synthase 7; AltName:
Full=Farnesyltranstransferase 7; AltName:
Full=Geranyltranstransferase 7; Flags: Precursor
gi|4217998|gb|AAD12206.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|91806194|gb|ABE65825.1| geranylgeranyl pyrophosphate synthase/GGPP
synthetase/farnesyltranstransferase [Arabidopsis
thaliana]
gi|330251692|gb|AEC06786.1| geranylgeranyl diphosphate synthase 7 [Arabidopsis thaliana]
Length = 347
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 134/247 (54%), Gaps = 14/247 (5%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
SY + L AV ++EP++++E +R+ + A + P LC+AACELVGG A
Sbjct: 57 SYMIGKANAVNEALDSAVSLREPIKIHEAIRYSLLARGKRVRPVLCIAACELVGGEESVA 116
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ AA A+ ++H S IH++LP D L + KPT + F + +L DA++ F E L
Sbjct: 117 LPAACAVEMIHTMSLIHDDLPCMDNDDL-RRGKPTNHKVFGEDVAVLAGDALISFAFEHL 175
Query: 164 ASSD--NPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEM 221
A+S +PA R++R + E+ +A+GS+G+V GQ +L D +D L E+
Sbjct: 176 ATSTAVSPA-----RVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGL------EV 224
Query: 222 TYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEE 281
+ K L GAI+GGGS++E+E LRR+ +G++ +V L T+ EE
Sbjct: 225 LEFIHVHKTAVLLEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEE 284
Query: 282 LKKLAFK 288
L K A K
Sbjct: 285 LGKTAGK 291
>gi|359474993|ref|XP_003631564.1| PREDICTED: geranylgeranyl pyrophosphate synthase-related protein,
chloroplastic-like isoform 2 [Vitis vinifera]
Length = 341
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 80/228 (35%), Positives = 124/228 (54%), Gaps = 16/228 (7%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAP-ALCVAACELVGGHRE 101
+SYWT++ +I L +A+ VK P ++YE MR+ V A AP +CVA CEL GG R
Sbjct: 51 RSYWTTLISEINTKLEEAIPVKYPQQIYEAMRYSVLAKGGKRAPPVMCVAVCELFGGDRL 110
Query: 102 QAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE 161
A A AL ++HAAS IH++LP D + +P+ + + + +L DA+ P G
Sbjct: 111 AAFPTACALEMVHAASLIHDDLPCMDDDP-SRRGQPSNHTVYGVDMAILAGDALFPLGFR 169
Query: 162 LLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEM 221
+ S G+++RV+ E+ R++GS G+ GQ+ +L+ + N + V+
Sbjct: 170 HIVSHTPSHLVPEGQLIRVIAEIARSVGSTGMAAGQFLDLEGAP--------NSVDFVQ- 220
Query: 222 TYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIV 269
+KK G + C A CG LGG ++ +I LRRYG VGM+ +V
Sbjct: 221 -----RKKFGEMAECSAVCGGFLGGAADDDILRLRRYGRAVGMLYQVV 263
>gi|224284786|gb|ACN40123.1| unknown [Picea sitchensis]
Length = 369
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 131/227 (57%), Gaps = 12/227 (5%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPAL-CVAACELVGGHRE 101
+ YW SV +++ A L ++V ++ P +++ MR+ V A P + C+AACE VGG ++
Sbjct: 81 RRYWNSVRKEMEAELEKSVPLRYPEKIHVSMRYSVLAEKAKRGPPMMCIAACEAVGGSKQ 140
Query: 102 QAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE 161
QA+ A AL ++H AS IH++LP D I + +P+ + F + +L DA+ P G E
Sbjct: 141 QALPTACALEMVHTASLIHDDLPCMDDDP-IRRGQPSNHTVFGVDMAVLAGDALFPLGFE 199
Query: 162 LLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEM 221
+ SS + + RI++V+ ++ + +GSQG+V GQY +L + + D L VE
Sbjct: 200 YIVSSTSDVPPD--RIVKVIAQIAKTVGSQGMVVGQYMDLGSTGNNKFDPSL-----VEF 252
Query: 222 TYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGI 268
+E +K G + C A G I+GG +++E+E LR YG VG++ I
Sbjct: 253 IHE---RKFGIMAECSAVTGGIIGGATDEEVERLRNYGRSVGVLYQI 296
>gi|6277254|dbj|BAA86284.1| geranylgeranyl pyrophosphate synthase [Croton sublyratus]
Length = 368
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 155/296 (52%), Gaps = 34/296 (11%)
Query: 11 PAHVAPRRNHSRPSLSYRPMMVTMAMST----PNKN---------KSYWTSVHEDIGAHL 57
P + +S+ S+SY +VT T NKN KSY I L
Sbjct: 33 PVSIPLFYRNSKRSVSYVSAIVTKDEETIQEEQNKNSSSSLGFDFKSYMVQKASAINQAL 92
Query: 58 RQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAAS 117
AV ++EP++++E MR+ + A + PALC+AACELVGG A+ AA A+ ++H S
Sbjct: 93 EAAVSLREPLKIHESMRYSLLAGGKRVRPALCLAACELVGGDESMAMPAACAVEMIHTMS 152
Query: 118 FIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD---NPAGNNS 174
IH++LP D L + KPT + F N +L DA+L F E +A S +P
Sbjct: 153 LIHDDLPCMDNDDL-RRGKPTNHIVFGENVAVLAGDALLAFAFEHIAVSTLNVSPV---- 207
Query: 175 GRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETY--KKKEGR 232
RI+R + E+ +A+G++G+V GQ ++ CS+ G+++V++ + K +
Sbjct: 208 -RIVRGVGELAKAIGAEGLVAGQVVDI-CSE---------GLSEVDLEKLEFIHIHKTAK 256
Query: 233 LHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
L GAI+GGG+++E+E LR+Y +G++ +V L T+ +EL K A K
Sbjct: 257 LLEGAVVLGAIMGGGTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGK 312
>gi|194272413|gb|ACF37217.1| geranylgeranyl diphosphate synthase [Ipomoea batatas]
Length = 363
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 138/248 (55%), Gaps = 15/248 (6%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K+Y E + L AV++KEP+ V+E MR+ + A + P LC+AACE+VGG
Sbjct: 73 KAYVLGKAESVNKALEAAVLLKEPLRVHESMRYSLLAGGKRIRPMLCIAACEMVGGDEAT 132
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ AA A+ ++H S +H++LP D L + KPT + F N +L DA+L F E
Sbjct: 133 AMPAACAVEMIHTMSLMHDDLPCMDNDDL-RRGKPTNHKVFGENVAVLAGDALLSFAFEH 191
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+A++ G +S +I+RV+ E+ + +G++G+V GQ ++ CS+ GI+DV +
Sbjct: 192 IATATK--GVSSEKIVRVIGELAKCIGAEGLVAGQVVDI-CSE---------GISDVGLE 239
Query: 223 YETY--KKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
+ + K L GA+LGGG+E+E+ LR++ +G++ +V L T+
Sbjct: 240 HLEFIHLHKTAALLEASVVLGAVLGGGTEEEVAKLRKFARNIGLLFQVVDDILDVTKSSH 299
Query: 281 ELKKLAFK 288
EL K A K
Sbjct: 300 ELGKTAGK 307
>gi|269996470|gb|ACZ57571.1| isoprenyl diphosphate synthase [Picea abies]
Length = 383
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 89/246 (36%), Positives = 129/246 (52%), Gaps = 10/246 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K Y S + L +AV ++ P +++E MR+ + A + P LC+AACELVGG E
Sbjct: 92 KEYMRSKAMSVNEALDRAVPLRYPEKIHEAMRYSLLAGGKRVRPILCIAACELVGGSEEL 151
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ A A+ ++H S IH++LP D L + KPT + F T +L DA+L F E
Sbjct: 152 AMPTACAMEIIHTMSLIHDDLPPMDNDDL-RRGKPTNHKVFGEGTAVLAGDALLSFAFEH 210
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+A S + S R+LRV+ E+ RA+GS+GV GQ ++ N +E
Sbjct: 211 IAVSTSKT-VESDRVLRVVSELGRAIGSEGVAGGQVADITSQG--------NPSVGLETL 261
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
+ K L C A GAI+GG S+ EIE +R+Y VG++ +V L T+ EEL
Sbjct: 262 EWIHIHKTAVLLECSVASGAIIGGASDDEIERVRKYARCVGLLFQVVDDILDVTKSSEEL 321
Query: 283 KKLAFK 288
K A K
Sbjct: 322 GKTAAK 327
>gi|224286499|gb|ACN40956.1| unknown [Picea sitchensis]
Length = 383
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 89/246 (36%), Positives = 129/246 (52%), Gaps = 10/246 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K Y S + L +AV ++ P +++E MR+ + A + P LC+AACELVGG E
Sbjct: 92 KEYMRSKAMSVNEALDRAVPLRYPEKIHEAMRYSLLAGGKRVRPILCIAACELVGGSEEL 151
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ A A+ ++H S IH++LP D L + KPT + F T +L DA+L F E
Sbjct: 152 AMPTACAMEIIHTMSLIHDDLPPMDNDDL-RRGKPTNHKVFGEGTAVLAGDALLSFAFEH 210
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+A S + S R+LRV+ E+ RA+GS+GV GQ ++ N +E
Sbjct: 211 IAVSTSKT-VESDRVLRVVSELGRAIGSEGVAGGQVADITSQG--------NPSVGLETL 261
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
+ K L C A GAI+GG S+ EIE +R+Y VG++ +V L T+ EEL
Sbjct: 262 EWIHIHKTAVLLECSVASGAIIGGASDDEIERVRKYARCVGLLFQVVDDILDVTKSSEEL 321
Query: 283 KKLAFK 288
K A K
Sbjct: 322 GKTAAK 327
>gi|147843373|emb|CAN78430.1| hypothetical protein VITISV_032031 [Vitis vinifera]
Length = 308
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 138/260 (53%), Gaps = 21/260 (8%)
Query: 37 STPNKNK------SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCV 90
TP + K +Y + L AV ++EPV+V+E MR+ + A + P LC+
Sbjct: 6 DTPEEEKPAFNFNAYILDKANSVNKALDDAVPIREPVKVHESMRYSLLAGGKRVRPVLCI 65
Query: 91 AACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELL 150
AACELVGG A+ AA A+ ++H S +H++LP D L + KPT + F N +L
Sbjct: 66 AACELVGGDEATAMPAACAVEMIHTMSLMHDDLPCMDNDDL-RRGKPTNHKVFGENVAIL 124
Query: 151 VADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDD 210
DA+L F E +A++ G G I+R + E+ +++GS+G+V GQ ++ CS+
Sbjct: 125 AGDALLAFAFEHMATA--TVGVPPGWIVRAVGELAKSIGSEGLVAGQVVDI-CSE----- 176
Query: 211 RKLNGITDVEMTYETY--KKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGI 268
G+ DV + + Y K L GAILGGGS +EIE LR++ +G++ +
Sbjct: 177 ----GLKDVGLEHLEYIHVHKTAALLEGAVVLGAILGGGSNEEIEKLRKFARCIGLLFQV 232
Query: 269 VSRRLGPTEEIEELKKLAFK 288
V L T+ +EL K A K
Sbjct: 233 VDDILDVTKSSQELGKTAGK 252
>gi|297836610|ref|XP_002886187.1| hypothetical protein ARALYDRAFT_900253 [Arabidopsis lyrata subsp.
lyrata]
gi|297332027|gb|EFH62446.1| hypothetical protein ARALYDRAFT_900253 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 146/283 (51%), Gaps = 18/283 (6%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K Y E I L +A+ + EP+ +Y+ MR+ +FA + P LC+AACELVGG
Sbjct: 113 KPYMIRKAETINRALDKAIPLIEPLNIYKAMRYTIFAGGKRVRPILCLAACELVGGGERS 172
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
AI AA ++ ++H S I ++LP D L + KPT + F + +L A+L E
Sbjct: 173 AIPAACSVEMIHTMSLIKDDLPCMDNDDL-RRGKPTTHKVFGESVAILSGGALLALAFEH 231
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
L +D +S +++RV+ E+ +++G++G+V GQ +L D +D +L + + +
Sbjct: 232 LTEAD----VSSKKMVRVVKELAKSIGTKGLVAGQAMDLSSEGLDPNDFRLEDLEYIHV- 286
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
K G L A GA++GGGSE+EIE +R + +G++ +V L T+ EEL
Sbjct: 287 -----HKTGALLEASAVIGAVIGGGSEEEIEKVRSFARCIGLLFQVVDDILDETKSSEEL 341
Query: 283 KKLAFKLREVNSFN-------DENAEVIFSLVDDNITHVLGFN 318
K A K + +++ E + L D H+ GF+
Sbjct: 342 GKTAGKDKVAGKLTYPRVIGLEKSKEFVKKLNRDAREHLQGFD 384
>gi|357483275|ref|XP_003611924.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
gi|355513259|gb|AES94882.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
Length = 371
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 139/255 (54%), Gaps = 14/255 (5%)
Query: 37 STPNKNKSYWTSVHED---IGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAAC 93
+ PN N ++ + E + L +A+V++EP ++YE MR+ + A + P LC+AAC
Sbjct: 72 TIPNFNFNFNGYMLEKANIVNKALDEAIVLQEPEKIYEAMRYSLLAGGKRVRPVLCIAAC 131
Query: 94 ELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVAD 153
LVGG E +I +A A+ ++H S IH++LP D L + KPT + + + +L D
Sbjct: 132 GLVGGKEEASIPSACAVEMIHTMSLIHDDLPCMDNDDL-RRGKPTNHKVYGEDVAVLAGD 190
Query: 154 AMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKL 213
A+L F E +A S G RI+R + E+ +A+G +G+V GQ +L+ + +
Sbjct: 191 ALLSFAFEHVAVS--TIGVPPERIVRAIAELAKAVGKEGLVAGQIVDLES-----EGKSN 243
Query: 214 NGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRL 273
G+ +E + +K L GAI+GGG+E EIE LR++ Y+G++ +V L
Sbjct: 244 VGLETLEF---IHLRKTAALLEAAVVMGAIVGGGTEDEIEKLRKFARYIGLLFQVVDDIL 300
Query: 274 GPTEEIEELKKLAFK 288
T+ EEL K A K
Sbjct: 301 DVTKSSEELGKTAGK 315
>gi|75250205|sp|Q94ID7.1|GGPPS_HEVBR RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
Short=GGPP synthase; Short=GGPS; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|14325238|dbj|BAB60678.1| geranylgeranyl diphosphate synthase [Hevea brasiliensis]
Length = 370
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 133/246 (54%), Gaps = 11/246 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
KSY I L A+ ++EP +++E MR+ + A + PALC+AACELVGG+
Sbjct: 80 KSYMLQKGNSINQALEAAIPLQEPAKIHESMRYSLLAGGKRVRPALCLAACELVGGNDSM 139
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ AA A+ ++H S IH++LP D L + KPT + F + +L DA+L F E
Sbjct: 140 AMPAACAVEMIHTMSLIHDDLPCMDNDDL-RRGKPTNHIVFGEDVAVLAGDALLAFAFEH 198
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+A S +S RI+R + E+ +A+G++G+V GQ ++ + D+E
Sbjct: 199 IAVS--TLNVSSARIVRAVGELAKAIGAEGLVAGQVVDINSEGSSE--------VDLEKL 248
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
+ K +L GAILGGG+++E+E LR+Y +G++ +V L T+ +EL
Sbjct: 249 EFIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQEL 308
Query: 283 KKLAFK 288
K A K
Sbjct: 309 GKTAGK 314
>gi|20386366|gb|AAM21638.1|AF492022_1 geranylgeranyl pyrophosphate synthase [Cistus creticus]
Length = 364
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/248 (34%), Positives = 134/248 (54%), Gaps = 15/248 (6%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
KSY + L AV ++EP++++E MR+ V A + P LC+AACELVGG
Sbjct: 74 KSYMIQKANSVNQALETAVSLREPLKIHEAMRYSVLAGGKRVRPVLCIAACELVGGEESM 133
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ AA A+ ++H S IH++ P D L + KPT + F + +L DA+L F E
Sbjct: 134 AMPAACAVEMIHTMSLIHDDPPCMDNDDL-RRGKPTNHKVFGEDIAVLAGDALLAFSFEH 192
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+ S G + RI+R + E+ +++GS+G+V GQ ++ CS+ G+TDV +
Sbjct: 193 MTGS--TVGVSPARIVRAVGELAKSIGSEGLVAGQVVDI-CSE---------GLTDVGLE 240
Query: 223 YETY--KKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
+ + K L GAILGGGS++E+E LR++ +G++ +V L T+
Sbjct: 241 HLEFIHVHKTAALLEGSVVLGAILGGGSDEEVEKLRKFARCIGLLFQVVDDILDVTKSST 300
Query: 281 ELKKLAFK 288
EL K A K
Sbjct: 301 ELGKTAGK 308
>gi|21593158|gb|AAM65107.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 371
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 134/245 (54%), Gaps = 7/245 (2%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
SY + E + L AV ++EP++++E MR+ + A + P LC+AACELVGG A
Sbjct: 78 SYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTA 137
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ AA A+ ++H S IH++LP D L + KPT + F + +L DA+L F E L
Sbjct: 138 MPAACAVEMIHTMSLIHDDLPCMDNDDL-RRGKPTNHKVFGEDVAVLAGDALLSFAFEHL 196
Query: 164 ASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTY 223
AS+ + + R++R + E+ +A+G++G+V GQ ++ D +D L + + +
Sbjct: 197 ASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHL-- 254
Query: 224 ETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELK 283
K L A AI+GGGS+ EIE LR++ +G++ +V L T+ +EL
Sbjct: 255 ----HKTAALLEASAVLRAIVGGGSDDEIERLRKFARCIGLLFQVVDDILYVTKSSKELG 310
Query: 284 KLAFK 288
K A K
Sbjct: 311 KTAGK 315
>gi|380039815|gb|AFD32422.1| geranylgeranyl diphosphate synthase [Taxus x media]
Length = 393
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 146/282 (51%), Gaps = 19/282 (6%)
Query: 16 PRRNHSRPSLSYRPM--MVTMAMSTPNKNKSYWTSVHED-------IGAHLRQAVVVKEP 66
P + S S S + M +V +A + K K +E + A L +A+ ++ P
Sbjct: 66 PYKQCSVSSRSTKTMAQLVDLAETEKAKGKDIEFDFNEHMKSKAVAVDAALDKAIPLEYP 125
Query: 67 VEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLS 126
+++EPMR+ + A + PALC+AACELVGG ++ A+ A A+ ++H S IH++LP
Sbjct: 126 EKIHEPMRYSLLAGGKRVRPALCIAACELVGGSQDLAMPTACAMEMIHTMSLIHDDLPCM 185
Query: 127 DRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTR 186
D + KPT + F +T +L DA+L F E +A + + S R LRV+ E+ +
Sbjct: 186 DNDDF-RRGKPTNHKVFGEDTAVLAGDALLSFAFEHIAVATSKT-VPSDRTLRVISELGK 243
Query: 187 AMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGG 246
+GSQG+V GQ ++ S+ D + D++ + K L C G ILGG
Sbjct: 244 TIGSQGLVGGQVVDI-ASEGDAN-------VDLKTLEWIHIHKTAVLLECSVVSGGILGG 295
Query: 247 GSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
+E EI +RRY VG++ +V L T+ EEL K A K
Sbjct: 296 ATEDEIARIRRYARCVGLLFQVVDDILDVTKSSEELGKTAGK 337
>gi|157965847|gb|ABW06960.1| geranylgeranyl diphosphate synthase [Corylus avellana]
Length = 373
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/248 (34%), Positives = 134/248 (54%), Gaps = 15/248 (6%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K+Y + L AV +K+P +++E MR+ + A + P LC+AACELVGG
Sbjct: 83 KTYMLQKANSVNQALDAAVSLKDPRKIHEAMRYSLLAGGKRVRPMLCIAACELVGGTESI 142
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ AA ++ ++H S IH++LP D L + KPT + F + +L DA+L F E
Sbjct: 143 AMPAACSVEMIHTMSLIHDDLPCMDNDDL-RRGKPTNHKVFGEDVAVLAGDALLAFSFEH 201
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+A S G RILR + E+ R++G++G+V GQ ++ CS+ G++DV +
Sbjct: 202 IAVSTE--GVPPARILRAIGELARSIGAEGLVAGQVVDI-CSE---------GLSDVGLE 249
Query: 223 YETY--KKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
+ + K L GAILGGGS +E+E LR + Y+G++ +V L T+ +
Sbjct: 250 HLEFIHLHKTAALLEGAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSQ 309
Query: 281 ELKKLAFK 288
EL K A K
Sbjct: 310 ELGKTAGK 317
>gi|20386368|gb|AAM21639.1|AF492023_1 geranylgeranyl pyrophosphate synthase [Cistus creticus]
Length = 369
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 134/248 (54%), Gaps = 15/248 (6%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
+SY + + + L AV ++EP++++E MR+ + A + P LC+AACELVGG
Sbjct: 79 QSYMDQMADSVNQALESAVSLREPLKIHEAMRYSLLAGGKRVRPLLCIAACELVGGDVSV 138
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ AA A+ ++H S IH++LP D L + KPT + AF + +L DA+L F E
Sbjct: 139 AMPAACAVEMIHTMSLIHDDLPCMDNDDL-RRGKPTNHKAFGEDIAVLAGDALLSFAFEH 197
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+A S G + +I+R + E+ +A+G +G+V GQ ++ G+ DV +
Sbjct: 198 VAVS--TVGASPDKIVRAVGELAKAVGKEGLVAGQVVDITS----------EGLNDVGLD 245
Query: 223 YETY--KKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
+ Y K L GAILGGG+++E+E LR++ +G++ +V L T+
Sbjct: 246 HLEYIHVHKTAVLLEAAVVLGAILGGGTDEEVERLRKFAICIGLLFQVVDDILDVTKSSV 305
Query: 281 ELKKLAFK 288
EL K A K
Sbjct: 306 ELGKTAGK 313
>gi|262036860|dbj|BAI47571.1| geranylgeranyl pyrophosphate synthase [Ipomoea sp. Kenyan]
Length = 373
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 140/247 (56%), Gaps = 15/247 (6%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
+Y + + L AV+VKEP+ ++E MR+ + A + P LC+AACELVGG E A
Sbjct: 84 AYVLGKAKSVNKALEGAVLVKEPLRIHESMRYSLLAGGKRIRPMLCIAACELVGGDEETA 143
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ AA A+ ++H S +H++LP D L + KPT + + + +L DA+L F E +
Sbjct: 144 MPAACAVEMIHTMSLMHDDLPCMDNDDL-RRGKPTNHKVYGEDVAVLAGDALLAFAFEHI 202
Query: 164 ASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTY 223
A++ G +S +I+RV+ E+ +++G++G+V GQ ++ CS+ GI++V + +
Sbjct: 203 ATATK--GASSEKIVRVVGELAKSIGAEGLVAGQVVDI-CSE---------GISNVGLEH 250
Query: 224 ETY--KKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEE 281
+ K L GAILGGG+E+EI LR++ +G++ +V L T+ +E
Sbjct: 251 LEFIHLHKTAALLEGSVVLGAILGGGTEEEIAKLRKFARNIGLLFQVVDDILDVTKSSKE 310
Query: 282 LKKLAFK 288
L K A K
Sbjct: 311 LGKTAGK 317
>gi|17352451|gb|AAL17614.2|AF425235_1 geranylgeranyl diphosphate synthase [Abies grandis]
Length = 383
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 128/247 (51%), Gaps = 12/247 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K Y S + L +AV ++ P ++E MR+ + A + P LC++ACELVGG E
Sbjct: 92 KEYLRSKAMAVNEALDRAVPLRYPERIHEAMRYSLLAGGKRVRPVLCISACELVGGTEEV 151
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ A A+ ++H S IH++LP D + KPT + F T +L DA+L F E
Sbjct: 152 AMPTACAMEMIHTMSLIHDDLPCMDNDDF-RRGKPTNHKVFGEGTAILAGDALLSFAFEH 210
Query: 163 LA-SSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEM 221
+A S+ G + RILRV+ E+ R +GSQG+V GQ ++ + D++
Sbjct: 211 IAVSTSKSVGTD--RILRVVSELGRTIGSQGLVGGQVADITSEG--------DASVDLDT 260
Query: 222 TYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEE 281
+ K L C CGAI+ G S+ EIE ++RY VG++ +V L T+ +E
Sbjct: 261 LEWIHIHKTAVLLECSVMCGAIISGASDNEIERIQRYARSVGLLFQVVDDILDVTKSSKE 320
Query: 282 LKKLAFK 288
L K A K
Sbjct: 321 LGKTAGK 327
>gi|449497746|ref|XP_004160506.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Cucumis sativus]
Length = 340
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 145/283 (51%), Gaps = 16/283 (5%)
Query: 6 SVLNLPAHVAPRRNHSRPSLSYRPMMVTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKE 65
S+L++ A + + P L + + P + + Y + L +AV +++
Sbjct: 18 SILSISAALTTEQTELHPQLEQNDVQ-----NPPFRFRDYMIQKSNLVNQALDEAVSLQD 72
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P++++E MR+ + A + P LC+AAC+LVGG AI AA ++ ++H S IH++LP
Sbjct: 73 PLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGSESAAIPAACSIEMIHTMSLIHDDLPC 132
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D L + KPT + F + +L DA+L F E +A++ A + R++R + E+
Sbjct: 133 MDNDDL-RRGKPTNHRMFGEDVAVLAGDALLSFAFEHMAAT--KAEVSPERVVRAIGELA 189
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
+A G+ G+V GQ ++ DD +E+ + K L A GAI+G
Sbjct: 190 KATGTGGLVAGQVVDIDSEGADD--------VGLELLEYIHVHKTAALLEAAAVMGAIVG 241
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GGSE+EIE LR + +G++ +V L T+ EEL K A K
Sbjct: 242 GGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTEELGKTAGK 284
>gi|116831087|gb|ABK28498.1| unknown [Arabidopsis thaliana]
Length = 373
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 146/283 (51%), Gaps = 18/283 (6%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K Y S E I L +A+ + EP+ +++ MR+ + A + P LC+AACELVGG
Sbjct: 82 KPYMISKAETINRALDEAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGEERL 141
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
AI AA A+ ++H S I ++LP D L + KPT + F + +L A+L E
Sbjct: 142 AIQAACAVEMIHTMSLIKDDLPCMDNDDL-RRGKPTTHKVFGESVAILSGGALLALAFEH 200
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
L +D +S +++R + E+ +++G++G+V GQ +L + +D G+ D+E
Sbjct: 201 LTEAD----VSSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDV---GLEDLEY- 252
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
+ K G L A GA++GGG+EKEIE +R + +G++ +V L T+ EEL
Sbjct: 253 --IHVHKTGSLLEASAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDETKSSEEL 310
Query: 283 KKLAFKLREVNSFN-------DENAEVIFSLVDDNITHVLGFN 318
K A K + +++ E + L D H+ GF+
Sbjct: 311 GKTAGKDKVAGKLTYPKVIGVEKSKEFVEKLKRDAREHLQGFD 353
>gi|449454249|ref|XP_004144868.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Cucumis sativus]
gi|449508802|ref|XP_004163415.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Cucumis sativus]
Length = 335
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 147/295 (49%), Gaps = 44/295 (14%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMA-PALCVAACELVGGHRE 101
K+YW + +I L +AV ++ P ++YE MR+ V A A P +CVAACEL G R
Sbjct: 43 KTYWKQLILEINQKLDEAVPLQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRL 102
Query: 102 QAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE 161
A A AL ++H AS IH++LP D + +P+ + + + +L DA+ P G +
Sbjct: 103 AAFPTACALEMVHEASLIHDDLPCMDDDP-SRRGQPSNHTVYGVDMAILAGDALFPLGFQ 161
Query: 162 LLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEM 221
+ S R+LRV+ E+ RA+GS+G+ GQ+ +L+ G VE
Sbjct: 162 HIVSHTPFDLVPESRLLRVVAEIARAVGSRGMAAGQFLDLE-----------GGPNSVEF 210
Query: 222 TYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIV-------SRRLG 274
E KK G + C A CG +L G + EI+ LRRYG VG++ +V S++L
Sbjct: 211 VQE---KKFGEMAQCSAVCGGLLAGAEDHEIQRLRRYGRAVGVLYQVVDDILEEQSKKLD 267
Query: 275 PTEE--------------IEELKKLAFKLR-----EVNSFNDENAEV--IFSLVD 308
T+E IE+ K++A +LR E+ F +V ++S VD
Sbjct: 268 YTDESKRSKGKSYVEVYGIEKAKEVAEELRAKAKNELEGFEKYGDQVMPLYSFVD 322
>gi|164605012|dbj|BAF98302.1| geranylgeranyl-diphosphate synthase [Hevea brasiliensis]
Length = 370
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 133/246 (54%), Gaps = 11/246 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
KSY I L A+ ++EP +++E MR+ + A + PALC+AACELVGG+
Sbjct: 80 KSYMLQKANSINQALEAAIPLQEPAKIHESMRYSLLAGGKRVRPALCLAACELVGGNDSM 139
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ AA A+ ++H S IH++LP D L + KPT + F + +L DA+L F E
Sbjct: 140 AMPAACAVGMIHTMSLIHDDLPCMDNDDL-RRGKPTNHIVFGEDVAVLAGDALLAFAFEH 198
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+A S +S RI+R + E+ +A+G++G+V GQ ++ + D+E
Sbjct: 199 IAVS--TLNVSSARIVRAVGELAKAIGAEGLVAGQVVDINSEGSSE--------VDLEKL 248
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
+ K +L GAILGGG+++E+E LR+Y +G++ +V L T+ +EL
Sbjct: 249 EFIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRKYARGIGLLFQVVDDILDVTKSSQEL 308
Query: 283 KKLAFK 288
K A K
Sbjct: 309 GKTAGK 314
>gi|413730|gb|AAA32797.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 371
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 133/245 (54%), Gaps = 7/245 (2%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
SY + E + L AV ++EP++++E M + + A + P LC+AACELVGG A
Sbjct: 78 SYIITKAELVNKALDSAVPLREPLKIHEAMSYSLLAGGKRVRPVLCIAACELVGGEESTA 137
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ A A+ ++H S IH++LP D L + KPT + F + +L DA+L F E L
Sbjct: 138 MPARCAVEMIHTMSLIHDDLPCMDNDDL-RRGKPTNHKVFGEDVAVLAGDALLSFSFEHL 196
Query: 164 ASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTY 223
AS+ + + R++R + E+ +A+G++G+V GQ ++ D +D L + + +
Sbjct: 197 ASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHL-- 254
Query: 224 ETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELK 283
K L A GAI+GGGS+ EIE LR++ +G++ +V L T+ +EL
Sbjct: 255 ----HKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELG 310
Query: 284 KLAFK 288
K A K
Sbjct: 311 KTAGK 315
>gi|357518399|ref|XP_003629488.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
gi|295322741|gb|ADG01842.1| geranylgeranyl-diphosphate synthase [Medicago truncatula]
gi|355523510|gb|AET03964.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
Length = 372
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 133/248 (53%), Gaps = 15/248 (6%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
KSY + L AV ++EP++V+E MR+ + A + P LC+AACELVGG
Sbjct: 82 KSYMIEKATRVNKALDDAVSLREPLKVHEAMRYSLLAGGKRVRPVLCLAACELVGGTEPM 141
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ AA A+ ++H S IH++LP D L + KPT + F + +L DA+L F E
Sbjct: 142 AMPAACAVEMIHTMSLIHDDLPCMDNDDL-RRGKPTNHKVFGEDVAVLAGDALLAFAFEH 200
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDV--E 220
+A S + RI+R + E+ +++GS+G+V GQ ++ G++DV E
Sbjct: 201 IAVS--TVDVSPARIVRAIGELAKSIGSEGLVAGQVVDINS----------EGLSDVGLE 248
Query: 221 MTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
+ K L GAILGGGS++++E LR++ Y+G++ +V L T+ +
Sbjct: 249 RLEFIHLHKTAALLEGAVVLGAILGGGSDEDVEKLRKFATYIGLLFQVVDDILDVTKSSQ 308
Query: 281 ELKKLAFK 288
EL K A K
Sbjct: 309 ELGKTAGK 316
>gi|79154586|gb|ABB52065.1| putative geranylgeranyl pyrophosphate synthase [Daucus carota
subsp. sativus]
Length = 365
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 150/279 (53%), Gaps = 12/279 (4%)
Query: 11 PAHVAPRRNHSRPSLSYRPMMVTMAMSTPNKN-KSYWTSVHEDIGAHLRQAVVVKEPVEV 69
P +V P + S S + + + P + KSY + L +V ++EPV++
Sbjct: 42 PQNVIPYSSMSISSFHTTKIAMDSSPKPPTFDFKSYMLEKAISVNKALDASVSLQEPVKI 101
Query: 70 YEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRT 129
+E MR+ + A + P L +AACEL GGH A+ +A A+ ++H S +H++LP D
Sbjct: 102 HESMRYSLLAGGKRVRPILSIAACELFGGHEAVAMPSACAVEMIHTMSLMHDDLPFMDND 161
Query: 130 SLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMG 189
L + KPT + + + +L DAML L+A+ +G +S +++RV+VE+ +A+G
Sbjct: 162 DL-RRGKPTNHKVYGESVAVLAGDAMLALAFHLVAT--ETSGVSSSQVVRVIVELAKAIG 218
Query: 190 SQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSE 249
++G+V GQ ++ C + D L G+ D+E ++ K L GAILGG ++
Sbjct: 219 AEGLVAGQIVDV----CSEGDPNL-GLKDLEF---IHRSKTAALLEGSVVMGAILGGAND 270
Query: 250 KEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
+E+E +R+Y +G++ +V L T+ +EL K A K
Sbjct: 271 EEVEKVRKYARCIGLLFQVVDDILDVTKSSKELGKTAGK 309
>gi|15224199|ref|NP_179454.1| geranylgeranyl pyrophosphate synthase 3 [Arabidopsis thaliana]
gi|75266042|sp|Q9SLG2.1|GGPP4_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 4; Short=GGPP
synthase 4; Short=GGPS4; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase 4; AltName:
Full=Dimethylallyltranstransferase 4; AltName:
Full=Farnesyl diphosphate synthase 4; AltName:
Full=Farnesyltranstransferase 4; AltName:
Full=Geranyltranstransferase 4; Flags: Precursor
gi|4185130|gb|AAD08933.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|20197573|gb|AAM15136.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|91806196|gb|ABE65826.1| geranylgeranyl pyrophosphate synthase/GGPP
synthetase/farnesyltranstransferase [Arabidopsis
thaliana]
gi|330251694|gb|AEC06788.1| geranylgeranyl pyrophosphate synthase 3 [Arabidopsis thaliana]
Length = 372
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 146/283 (51%), Gaps = 18/283 (6%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K Y S E I L +A+ + EP+ +++ MR+ + A + P LC+AACELVGG
Sbjct: 82 KPYMISKAETINRALDEAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGEERL 141
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
AI AA A+ ++H S I ++LP D L + KPT + F + +L A+L E
Sbjct: 142 AIQAACAVEMIHTMSLIKDDLPCMDNDDL-RRGKPTTHKVFGESVAILSGGALLALAFEH 200
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
L +D +S +++R + E+ +++G++G+V GQ +L + +D G+ D+E
Sbjct: 201 LTEAD----VSSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQND---VGLEDLEY- 252
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
+ K G L A GA++GGG+EKEIE +R + +G++ +V L T+ EEL
Sbjct: 253 --IHVHKTGSLLEASAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDETKSSEEL 310
Query: 283 KKLAFKLREVNSFN-------DENAEVIFSLVDDNITHVLGFN 318
K A K + +++ E + L D H+ GF+
Sbjct: 311 GKTAGKDKVAGKLTYPKVIGVEKSKEFVEKLKRDAREHLQGFD 353
>gi|4958920|dbj|BAA78047.1| GGPP synthase [Daucus carota]
Length = 367
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/246 (34%), Positives = 132/246 (53%), Gaps = 12/246 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
+ Y + + I L +AV V++P ++E MR+ + A + P LC+A+CELVGG
Sbjct: 77 EGYMKTSGKKINKALDEAVPVQKPAIIHEAMRYSLLAGGKRVRPVLCIASCELVGGLESW 136
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ A AL ++H S IH++LP D L + KPT + + T +L DA+L E
Sbjct: 137 AMPMACALEMIHTMSLIHDDLPCMDNDDL-RRGKPTNHKVYGEETAILAGDALLSLAFEH 195
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+A + + GR++R + E+ A+GSQG+V GQ ++ C+Q D D + D+E
Sbjct: 196 VADATDMV--TPGRVVRAIAELGSAVGSQGLVAGQIMDI-CNQGKDVD-----LNDLEY- 246
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
+ K +L CGAILGGG+ E+E LR+Y +G++ +V L T+ EL
Sbjct: 247 --IHVHKTSKLLEASVVCGAILGGGNVIEVERLRKYARCIGLLFQVVDDILDVTKSSAEL 304
Query: 283 KKLAFK 288
K A K
Sbjct: 305 GKTAGK 310
>gi|50252136|dbj|BAD28132.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica
Group]
gi|215713481|dbj|BAG94618.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740753|dbj|BAG97409.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767016|dbj|BAG99244.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 342
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 148/309 (47%), Gaps = 52/309 (16%)
Query: 45 YWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVN------MAPALCVAACELVGG 98
YWTS+ D+ A L A+ ++ P ++ MR+ V N P LCVAACEL+G
Sbjct: 45 YWTSLIADVEAELDAAMPIRTPERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAACELLGA 104
Query: 99 HREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPF 158
RE A+ AA AL ++HAAS +H++LP D + + +P+ + A+ + +L DA+ P
Sbjct: 105 PREAALPAAVALEMLHAASLVHDDLPCFD-AAPTRRGRPSTHAAYGTDMAVLAGDALFPL 163
Query: 159 GL-ELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGIT 217
++A + +P +LRV+ E+ RA+GS G+ GQ+ +L + + + +T
Sbjct: 164 AYTHVIAHTPSPDPVPHAVLLRVLGELARAVGSTGMAAGQFLDLAGATALGEAEVMKVLT 223
Query: 218 DVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIV-------- 269
KK G + C AACGA+LGG E LRRYG +G++ +V
Sbjct: 224 ----------KKFGEMAECSAACGAMLGGAGPDEEAALRRYGRTIGVLYQLVDDIRSASG 273
Query: 270 ----------------SRRLGPTEEIEELKKLAFKLREVNSFNDENAEVI---FSLVDDN 310
R LG EE++ K+ E + F D+ E + +S VD
Sbjct: 274 NGKMRSNASVLRALGMDRALGIVEELKAQAKM-----EADRFGDKYGERVLPLYSFVDYA 328
Query: 311 ITHVLGFNL 319
+ GF L
Sbjct: 329 VER--GFEL 335
>gi|125540612|gb|EAY87007.1| hypothetical protein OsI_08402 [Oryza sativa Indica Group]
Length = 344
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 148/309 (47%), Gaps = 52/309 (16%)
Query: 45 YWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVN------MAPALCVAACELVGG 98
YWTS+ D+ A L A+ ++ P ++ MR+ V N P LCVAACEL+G
Sbjct: 47 YWTSLIADVEAELDAAMPIRTPERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAACELLGA 106
Query: 99 HREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPF 158
RE A+ AA AL ++HAAS +H++LP D + + +P+ + A+ + +L DA+ P
Sbjct: 107 PREAALPAAVALEMLHAASLVHDDLPCFD-AAPTRRGRPSTHAAYGTDMAVLAGDALFPL 165
Query: 159 GL-ELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGIT 217
++A + +P +LRV+ E+ RA+GS G+ GQ+ +L + + + +T
Sbjct: 166 AYTHVIAHTPSPDPVPHAVLLRVLGELARAVGSTGMAAGQFLDLAGATALGEAEVMKVLT 225
Query: 218 DVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIV-------- 269
KK G + C AACGA+LGG E LRRYG +G++ +V
Sbjct: 226 ----------KKFGEMAECSAACGAMLGGAGPDEEAALRRYGRTIGVLYQLVDDIRSASG 275
Query: 270 ----------------SRRLGPTEEIEELKKLAFKLREVNSFNDENAEVI---FSLVDDN 310
R LG EE++ K+ E + F D+ E + +S VD
Sbjct: 276 NGKMRSNASVLRALGMDRALGIVEELKAQAKM-----EADRFGDKYGERVLPLYSFVDYA 330
Query: 311 ITHVLGFNL 319
+ GF L
Sbjct: 331 VER--GFEL 337
>gi|79154639|gb|ABB52066.1| putative geranylgeranyl pyrophosphate synthase [Daucus carota
subsp. sativus]
Length = 367
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/246 (34%), Positives = 132/246 (53%), Gaps = 12/246 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
+ Y + + I L +AV V++P ++E MR+ + A + P LC+A+CELVGG
Sbjct: 77 EGYMKTSGKKINKALDEAVPVQKPAIIHEAMRYSLLAGGKRVRPVLCIASCELVGGLESW 136
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ A AL ++H S IH++LP D L + KPT + + T +L DA+L E
Sbjct: 137 AMPMACALEMIHTMSLIHDDLPCMDNDDL-RRGKPTNHKVYGEETAILAGDALLSLAFEH 195
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+A + + GR++R + E+ A+GSQG+V GQ ++ C+Q D D + D+E
Sbjct: 196 VADATDMV--TPGRVVRAIAELGSAVGSQGLVAGQIMDI-CNQGKDVD-----LNDLEY- 246
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
+ K +L CGAILGGG+ E+E LR+Y +G++ +V L T+ EL
Sbjct: 247 --IHVHKTSKLLEASVVCGAILGGGNVIEVERLRKYARCIGLLFQVVDDILDVTKSSAEL 304
Query: 283 KKLAFK 288
K A K
Sbjct: 305 GKTAGK 310
>gi|297599729|ref|NP_001047684.2| Os02g0668100 [Oryza sativa Japonica Group]
gi|255671156|dbj|BAF09598.2| Os02g0668100, partial [Oryza sativa Japonica Group]
Length = 349
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 148/309 (47%), Gaps = 52/309 (16%)
Query: 45 YWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVN------MAPALCVAACELVGG 98
YWTS+ D+ A L A+ ++ P ++ MR+ V N P LCVAACEL+G
Sbjct: 52 YWTSLIADVEAELDAAMPIRTPERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAACELLGA 111
Query: 99 HREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPF 158
RE A+ AA AL ++HAAS +H++LP D + + +P+ + A+ + +L DA+ P
Sbjct: 112 PREAALPAAVALEMLHAASLVHDDLPCFD-AAPTRRGRPSTHAAYGTDMAVLAGDALFPL 170
Query: 159 GL-ELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGIT 217
++A + +P +LRV+ E+ RA+GS G+ GQ+ +L + + + +T
Sbjct: 171 AYTHVIAHTPSPDPVPHAVLLRVLGELARAVGSTGMAAGQFLDLAGATALGEAEVMKVLT 230
Query: 218 DVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIV-------- 269
KK G + C AACGA+LGG E LRRYG +G++ +V
Sbjct: 231 ----------KKFGEMAECSAACGAMLGGAGPDEEAALRRYGRTIGVLYQLVDDIRSASG 280
Query: 270 ----------------SRRLGPTEEIEELKKLAFKLREVNSFNDENAEVI---FSLVDDN 310
R LG EE++ K+ E + F D+ E + +S VD
Sbjct: 281 NGKMRSNASVLRALGMDRALGIVEELKAQAKM-----EADRFGDKYGERVLPLYSFVDYA 335
Query: 311 ITHVLGFNL 319
+ GF L
Sbjct: 336 VER--GFEL 342
>gi|22535961|gb|AAN01135.1| geranyl diphosphate synthase [Abies grandis]
Length = 387
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 124/233 (53%), Gaps = 12/233 (5%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L +A+ P +++E MR+ + A + P LC+AACELVGG E A+ A A+ ++H
Sbjct: 110 LDKAIPHSYPQKIHESMRYSLLAGGKRVRPVLCIAACELVGGREELAMPTACAMEMIHTM 169
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE-LLASSDNPAGNNSG 175
S IH++LP D L + KPT + F +T LL DA+ F E ++A + G++
Sbjct: 170 SLIHDDLPCMDNDDL-RRGKPTNHKVFGQDTALLAGDALHAFAFEHIVAFTSKSVGSDG- 227
Query: 176 RILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHA 235
ILR + E+ RA G QG++ GQ ++ + + D++ + K L
Sbjct: 228 -ILRAVTELARATGPQGIMGGQIVDIASER--------DAFVDLQTLEWIHIHKTAVLFE 278
Query: 236 CGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
C CGAI+GG S EIE +RR+ Y+G++ +V L T+ E+L K A K
Sbjct: 279 CATVCGAIIGGASGDEIERIRRFARYLGLLFQVVDDILDVTKSSEDLGKTAGK 331
>gi|168203183|gb|ACA21462.1| geranylgeranyl diphosphate synthase 6 [Picea abies]
Length = 385
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 132/248 (53%), Gaps = 15/248 (6%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K Y S I L + V ++ P +++E MR+ + A + P LC+A+CELVGG E
Sbjct: 95 KKYMFSKANAINEALDKCVSLRHPEKIHEAMRYSLLAGGKRVRPILCIASCELVGGSEES 154
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
+ +A A+ ++H S IH++LP D L + KPT + F + +L DA+L F E
Sbjct: 155 VMPSACAVEMIHTMSLIHDDLPCMDNDDL-RRGKPTNHKVFGEDVAVLAGDALLAFAFEH 213
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+A S G + ++LRV+ E+ RA+GS+G+V GQ +L G+++V +
Sbjct: 214 IACSTK--GVEAEKVLRVIWELGRAIGSEGLVAGQVVDLSS----------GGLSNVGLD 261
Query: 223 YETY--KKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
Y K L GAI+GGGS++EIE LRR+ +G++ +V L T+ +
Sbjct: 262 LLEYIHVHKTAALLEGSVVIGAIIGGGSDEEIERLRRFARCIGLMFQVVDDILDVTKSSQ 321
Query: 281 ELKKLAFK 288
EL K A K
Sbjct: 322 ELGKTACK 329
>gi|46241274|gb|AAS82860.1| geranyl diphosphate synthase large subunit [Antirrhinum majus]
Length = 372
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 135/248 (54%), Gaps = 15/248 (6%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K+Y + L QAV++KEP++++E MR+ + A + P LC+AACELVGG
Sbjct: 82 KTYMLEKASSVNKALEQAVLLKEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGLEST 141
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ +A A+ ++H S IH++LP D L + KPT + + + +L DA+L F E
Sbjct: 142 AMPSACAVEMIHTMSLIHDDLPCMDNDDL-RRGKPTNHKIYGEDVAVLAGDALLAFSFEH 200
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+A S G +S RI+RV+ E+ + +GS+G+V GQ ++ G+T+V +
Sbjct: 201 VAKSTK--GVSSDRIVRVIGELAKCIGSEGLVAGQVVDISS----------EGMTEVGLE 248
Query: 223 YETY--KKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
+ + K L GAI+GG ++++E LR++ +G++ +V L T+ +
Sbjct: 249 HLEFIHVHKTAALLEASVVLGAIVGGADDEDVEKLRKFARCIGLLFQVVDDILDVTKSSQ 308
Query: 281 ELKKLAFK 288
EL K A K
Sbjct: 309 ELGKTAGK 316
>gi|255580739|ref|XP_002531191.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223529232|gb|EEF31206.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
Length = 372
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 132/244 (54%), Gaps = 12/244 (4%)
Query: 45 YWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAI 104
Y + + + L +A+ ++ PV++++ MR+ + A + P LC+AACELVGG A+
Sbjct: 85 YMATKAKHVNKALDEAIPLQNPVKIHDAMRYSLLAGGKRVRPVLCIAACELVGGDEATAM 144
Query: 105 VAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA 164
AA A+ ++H S IH++LP D L + KPT + F T +L DA+L F E +A
Sbjct: 145 PAACAMEMIHTMSLIHDDLPCMDNDDL-RRGKPTNHKMFGEETAILAGDALLSFSFEHVA 203
Query: 165 SSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYE 224
S + R++R + E+ A+GS+G+V GQ ++ D + K ++D+E
Sbjct: 204 RSTKNVSPD--RVVRAIAELGSAVGSEGLVAGQIVDI------DSEGKDVSVSDLEY--- 252
Query: 225 TYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
+ K +L CGAILGG ++ +E +R+Y +G++ +V L T+ EEL K
Sbjct: 253 IHIHKTAKLLEASVVCGAILGGADDESVERVRKYARCIGLLFQVVDDILDVTKSSEELGK 312
Query: 285 LAFK 288
A K
Sbjct: 313 TAGK 316
>gi|449448558|ref|XP_004142033.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Cucumis sativus]
Length = 375
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 133/250 (53%), Gaps = 11/250 (4%)
Query: 39 PNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGG 98
P + + Y + L +AV +++P++++E MR+ + A + P LC+AAC+LVGG
Sbjct: 81 PFRFRDYMIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGG 140
Query: 99 HREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPF 158
AI AA ++ ++H S IH++LP D L + KPT + F + +L DA+L F
Sbjct: 141 SESAAIPAACSIEMIHTMSLIHDDLPCMDNDDL-RRGKPTNHRMFGEDVAVLAGDALLSF 199
Query: 159 GLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITD 218
E +A++ A + R++R + E+ +A G+ G+V GQ ++ DD
Sbjct: 200 AFEHMAATK--AEVSPERVVRAIGELAKATGTGGLVAGQVVDIDSEGADD--------VG 249
Query: 219 VEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEE 278
+E+ + K L A GAI+GGGSE+EIE LR + +G++ +V L T+
Sbjct: 250 LELLEYIHVHKTAALLEAAAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKS 309
Query: 279 IEELKKLAFK 288
EEL K A K
Sbjct: 310 TEELGKTAGK 319
>gi|302843854|ref|XP_002953468.1| hypothetical protein VOLCADRAFT_109214 [Volvox carteri f.
nagariensis]
gi|300261227|gb|EFJ45441.1| hypothetical protein VOLCADRAFT_109214 [Volvox carteri f.
nagariensis]
Length = 312
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 144/269 (53%), Gaps = 19/269 (7%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L +AV K P +YE MR+ + A + PALC+AACEL+GG + A+ AA A+ ++H
Sbjct: 37 LDEAVPQKYPDTLYESMRYSLLAGGKRVRPALCLAACELIGGDVQAALPAACAMEMIHTM 96
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGR 176
S IH++LP D + +PT + + + +L DA+L + E +A + G ++ R
Sbjct: 97 SLIHDDLPSMDNDDF-RRGRPTNHKVYGEDIAILSGDALLTYAFEHIARATK--GVSAER 153
Query: 177 ILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHAC 236
+LRV++E+ RA G++G+V GQ ++Q +D+++ +++ + K L
Sbjct: 154 VLRVIMELGRATGAEGLVAGQVVDIQS-----EDKEVG----LDVLKYIHLHKTAALLEA 204
Query: 237 GAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVNSFN 296
CGAI+GG E IE LR+Y +G+ +V L T+ E+L K A K VN
Sbjct: 205 SVVCGAIVGGADEATIEKLRKYSRNIGLAFQVVDDILDVTQTTEQLGKTAAKDLAVNKTT 264
Query: 297 -------DENAEVIFSLVDDNITHVLGFN 318
+++ EV L+++ I + GF+
Sbjct: 265 YPKLLGLEKSREVAEQLINEAIQQLDGFD 293
>gi|297836608|ref|XP_002886186.1| hypothetical protein ARALYDRAFT_480767 [Arabidopsis lyrata subsp.
lyrata]
gi|297332026|gb|EFH62445.1| hypothetical protein ARALYDRAFT_480767 [Arabidopsis lyrata subsp.
lyrata]
Length = 372
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 147/283 (51%), Gaps = 18/283 (6%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K Y + E I L +A+ + EP+ +++ MR+ + A + P LC+AACELVGG
Sbjct: 82 KPYMINKAETINRALDEAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGEERL 141
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
AI AA A+ ++H S I ++LP D L + KPT + F + +L A+L E
Sbjct: 142 AIQAACAVEMIHTMSLIKDDLPCMDNDDL-RRGKPTTHKVFGESVAILSGGALLALAFEH 200
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
L +D +S +++RV+ E+ +++G++G+V GQ +L D +D G+ D+E
Sbjct: 201 LTEAD----VSSKKMVRVVKELAKSIGTKGLVAGQAMDLSSEGLDPNDV---GLEDLEY- 252
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
+ K G L A GA++GGGSE+EIE +R + +G++ +V L T+ EEL
Sbjct: 253 --IHVHKTGALLEASAVIGAVIGGGSEEEIEKVRYFARCIGLLFQVVDDILDETKSSEEL 310
Query: 283 KKLAFKLREVNSFN-------DENAEVIFSLVDDNITHVLGFN 318
K A K + +++ E + L + H+ GF+
Sbjct: 311 GKTAGKDQVAGKLTYPKVMGLEKSKEFVKKLKREAKEHIQGFD 353
>gi|14422402|dbj|BAB60820.1| putative GGPP synthase [Eucommia ulmoides]
Length = 288
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 134/240 (55%), Gaps = 15/240 (6%)
Query: 51 EDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAAL 110
+ + L V+++ P++++E MR+ + A + P LC+AACELVGG A+ AA A+
Sbjct: 6 DSVNKALEATVLLRYPIKIHESMRYSILAGGKRVRPLLCIAACELVGGQESTAMPAACAV 65
Query: 111 HVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPA 170
++H S +H++LP D L + KPT + F + +L D++L F EL+A+S
Sbjct: 66 EMIHTMSLMHDDLPCMDNDDL-RRGKPTNHMVFGEDVAVLAGDSLLAFAFELIATS--TT 122
Query: 171 GNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETY--KK 228
G + RI+RV+ E+ +++GS+G+V GQ ++ CS+ G+TDV + + +
Sbjct: 123 GVPADRIVRVIGELAKSIGSEGLVAGQVIDI-CSE---------GMTDVGLEHLEFIHVH 172
Query: 229 KEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
K L GAILGG ++ E+E LR++ +G + +V L T+ +EL K A K
Sbjct: 173 KTAALLEGSVVLGAILGGATDPEVEKLRKFARCIGFLFQVVDDILDVTKSSQELGKTAGK 232
>gi|58201026|gb|AAW66658.1| geranyl diphosphate synthase [Picrorhiza kurrooa]
Length = 371
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 137/253 (54%), Gaps = 12/253 (4%)
Query: 37 STPNKN-KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACEL 95
+TP + KSY + + L ++ + EP+++ E MR+ + A + P LC+AACEL
Sbjct: 74 TTPTFDFKSYMLQKADSVNKALDDSIPLTEPLKIQESMRYSLLAGGKRIRPMLCIAACEL 133
Query: 96 VGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAM 155
VGG A+ AA A+ ++H S +H++LP D L + KPT + F + +L DAM
Sbjct: 134 VGGDESTAMPAACAVEMVHTMSLMHDDLPCMDNDDL-RRGKPTNHKVFTEDVAVLAGDAM 192
Query: 156 LPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNG 215
L F E +AS G S RI+RV+ E+ + +G +G+V GQ ++ CS+ D+ G
Sbjct: 193 LAFSFEHVASLTK--GVCSERIVRVIYELAKCVGCEGLVAGQVVDI-CSEGMDE----VG 245
Query: 216 ITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGP 275
+ +E + K L GAILGGGS++E+E LR + +G++ +V L
Sbjct: 246 LEHLEF---IHLNKTAALLEGSVVLGAILGGGSDEEVEKLRNFARCIGLLFQVVDDILDV 302
Query: 276 TEEIEELKKLAFK 288
T+ +EL K A K
Sbjct: 303 TKSSKELGKTAGK 315
>gi|4322331|gb|AAD16018.1| geranylgeranyl diphosphate synthase [Taxus canadensis]
gi|44972242|gb|AAS49033.1| geranylgeranyl diphosphate synthase [Taxus x media]
gi|45505274|gb|AAS67008.1| geranylgeranyl diphosphate synthase [Taxus x media]
gi|86277807|gb|ABC88389.1| geranylgeranyl diphosphate synthase [Taxus wallichiana]
Length = 393
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 145/282 (51%), Gaps = 19/282 (6%)
Query: 16 PRRNHSRPSLSYRPM--MVTMAMSTPNKNKS-------YWTSVHEDIGAHLRQAVVVKEP 66
P + S S S + M +V +A + + K Y S + A L +A+ ++ P
Sbjct: 66 PYKQCSVSSKSTKTMAQLVDLAETEKAEGKDIEFDFNEYMKSKAVAVDAALDKAIPLEYP 125
Query: 67 VEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLS 126
+++E MR+ + A + PALC+AACELVGG ++ A+ A A+ ++H S IH++LP
Sbjct: 126 EKIHESMRYSLLAGGKRVRPALCIAACELVGGSQDLAMPTACAMEMIHTMSLIHDDLPCM 185
Query: 127 DRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTR 186
D + KPT + F +T +L DA+L F E +A + + S R LRV+ E+ +
Sbjct: 186 DNDDF-RRGKPTNHKVFGEDTAVLAGDALLSFAFEHIAVATSKT-VPSDRTLRVISELGK 243
Query: 187 AMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGG 246
+GSQG+V GQ ++ S+ D + D++ + K L C G ILGG
Sbjct: 244 TIGSQGLVGGQVVDIT-SEGDAN-------VDLKTLEWIHIHKTAVLLECSVVSGGILGG 295
Query: 247 GSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
+E EI +RRY VG++ +V L T+ EEL K A K
Sbjct: 296 ATEDEIARIRRYARCVGLLFQVVDDILDVTKSSEELGKTAGK 337
>gi|13431547|sp|Q43133.1|GGPPS_SINAL RecName: Full=Geranylgeranyl pyrophosphate synthase,
chloroplastic/chromoplastic; Short=GGPP synthase;
Short=GGPS; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase; AltName: Full=Dimethylallyltranstransferase;
AltName: Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|1419758|emb|CAA67330.1| geranylgeranyl pyrophosphate synthase [Sinapis alba]
Length = 366
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 134/245 (54%), Gaps = 8/245 (3%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
SY + + L AV ++EP++++E MR+ + A + P LC+AACELVGG A
Sbjct: 74 SYIIRKADSVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESLA 133
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ A A+ ++H S IH++LP D L + KPT + + + +L DA+L F E L
Sbjct: 134 MPARCAVEMIHTMSLIHDDLPCMDNDDL-RRGKPTNHKVYGEDVAVLAGDALLSFAFEHL 192
Query: 164 ASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTY 223
AS+ + + + R++R + E+ +A+G++G+V GQ ++ D LN + + +
Sbjct: 193 ASATS-SEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLD-----LNNVGLEHLKF 246
Query: 224 ETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELK 283
K L A A G I+GGGS++EIE LR++ +G++ +V L T+ +EL
Sbjct: 247 IHLHKTAALLEA-SAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVTKSSQELG 305
Query: 284 KLAFK 288
K A K
Sbjct: 306 KTAGK 310
>gi|9971808|gb|AAG10424.1| GGDP synthase [Tagetes erecta]
Length = 361
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 87/246 (35%), Positives = 133/246 (54%), Gaps = 12/246 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
KSY + L AV +K+P++++E MR+ + A + P LC+AACELVGG
Sbjct: 72 KSYMLEKANLVNQALDLAVPLKDPIKIHESMRYSLLAGGKRVRPVLCIAACELVGGDGLT 131
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ AA A+ ++H S +H++LP D + KPT + + +L DAML F E
Sbjct: 132 AMPAACAVEMIHTMSLMHDDLPCMDNDDF-RRGKPTNHMVYGEEIAVLGGDAMLSFAFEH 190
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+A++ G +S RILR + E+ + +GS+G+V GQ ++ CS+ D G+ +E
Sbjct: 191 MATATK--GVSSDRILRAIGELAKCIGSEGLVAGQVVDI-CSEGAD-----VGLEHLEF- 241
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
+ K L GAILGGGS+ EIE LR++ +G++ +V L T+ EEL
Sbjct: 242 --IHLHKTAALLEGSVVLGAILGGGSDGEIEKLRKFARSIGLLFQVVDDILDVTKSSEEL 299
Query: 283 KKLAFK 288
K A K
Sbjct: 300 GKTAGK 305
>gi|426322797|gb|AFY26193.1| geranylgeranyl diphosphate synthase [Picrorhiza kurrooa]
Length = 354
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 131/248 (52%), Gaps = 15/248 (6%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
KSY + L ++ + EP++++E MR+ + A + P LC+AACELVGG
Sbjct: 64 KSYMLEKANSVNKALDDSIPLTEPLKIHESMRYSLLAGGKRIRPLLCIAACELVGGEEST 123
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ AA A+ ++H S +H++LP D L + KPT + F + +L DAML E
Sbjct: 124 AMPAACAVEMVHTMSLMHDDLPCMDNDDL-RRGKPTNHKIFSEDVAVLAGDAMLALSFEH 182
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+A+S G S RI+RV+ E+ + +G +G+V GQ ++ G+T V +
Sbjct: 183 VATSTK--GVPSERIIRVIYELAKCIGCEGLVAGQVVDISS----------EGMTQVGLE 230
Query: 223 YETY--KKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
+ + K L GA+LGGGS++E+E LR++ +G++ +V L T+ +
Sbjct: 231 HLEFIHSNKTAALLEGSVVLGALLGGGSDEEVEKLRKFARCIGLLFQVVDDILDVTKSSK 290
Query: 281 ELKKLAFK 288
EL K A K
Sbjct: 291 ELGKTAGK 298
>gi|449461425|ref|XP_004148442.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Cucumis sativus]
gi|449514740|ref|XP_004164466.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Cucumis sativus]
Length = 363
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 127/246 (51%), Gaps = 11/246 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K Y + L AV ++EP+ ++E MR+ + A + P LC+AACELVGG+
Sbjct: 73 KEYMVQKGASVNHALDAAVFLREPLRIHEAMRYSLMAGGKRVRPVLCIAACELVGGNESM 132
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ AA A+ ++H S IH++LP D L + KPT + F + +L DA+L F E
Sbjct: 133 AMPAACAVEMIHTMSLIHDDLPCMDNDDL-RRGKPTNHKVFGEDVAVLAGDALLAFAFEH 191
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+A S G + RI+R + E+ +++G++G+V GQ ++ D +E
Sbjct: 192 IAVS--TIGVSPPRIVRAIGELAKSIGAEGLVAGQVVDINSEGAAD--------AGLEQL 241
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
+ K L GAILGGGS +++E LR + Y+G++ +V L T+ EL
Sbjct: 242 EYIHLHKTAALLEAAVVLGAILGGGSNEDVEKLRNFARYIGLLFQVVDDILDVTKSSNEL 301
Query: 283 KKLAFK 288
K A K
Sbjct: 302 GKTAGK 307
>gi|224069436|ref|XP_002302977.1| predicted protein [Populus trichocarpa]
gi|222844703|gb|EEE82250.1| predicted protein [Populus trichocarpa]
Length = 314
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 131/246 (53%), Gaps = 12/246 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K Y + + + L +AV ++ P++++E MR+ + M P LC+A+CELVGG E
Sbjct: 25 KEYMLTKLKQVNEALEEAVPLQHPIKIHEAMRYSLLGNGKRMCPILCIASCELVGGDEEL 84
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ A AL ++HA S IH++LP D L + KPT + F +L DA+L E
Sbjct: 85 AMPLACALEMVHAMSLIHDDLPCMDNDDL-RRGKPTNHKVFGECIAILAGDALLSLAFEH 143
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+AS + ++R + E+ A+GS+GVV GQ ++ D + ++++ T +
Sbjct: 144 IASKTKNVSPDC--VVRAIAELGSAIGSRGVVAGQIVDI-----DSEGKEVSMKT---LE 193
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
Y + K +L A CGAI+GG + IE LR+Y +G++ +V L T+ EEL
Sbjct: 194 Y-IHVHKTAKLLEASAVCGAIMGGADDASIERLRKYARSIGLLYQVVDDILDATKSSEEL 252
Query: 283 KKLAFK 288
K A K
Sbjct: 253 GKTAGK 258
>gi|224133886|ref|XP_002327704.1| predicted protein [Populus trichocarpa]
gi|222836789|gb|EEE75182.1| predicted protein [Populus trichocarpa]
Length = 366
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 133/248 (53%), Gaps = 15/248 (6%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
KSY + L AV +KEP +++E MR+ + A + P LC+AACELVGG
Sbjct: 76 KSYMIQKANSVNKALDTAVTLKEPAKIHESMRYSLLAGGKRVRPVLCLAACELVGGSESM 135
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ AA A+ ++H S IH++LP D L + K T + F + +L DA+L F E
Sbjct: 136 AMPAACAVEMIHTMSLIHDDLPCMDNDDL-RRGKSTNHIVFGEDVAVLAGDALLAFAFEH 194
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDV--E 220
+A S + RI+R + E+ + +G++G+V GQ ++ CS+ G+++V E
Sbjct: 195 IAVS--TLNVSPLRIVRAVGELAKVIGAEGLVAGQVVDI-CSE---------GLSEVGLE 242
Query: 221 MTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
+ K +L GAILGGG+++E+E LRRY +G++ +V L T+ +
Sbjct: 243 QLEFIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRRYARSIGLLFQVVDDILDVTKSSQ 302
Query: 281 ELKKLAFK 288
EL K A K
Sbjct: 303 ELGKTAGK 310
>gi|307950755|gb|ACA21458.2| geranyl diphosphate synthase 2 [Picea abies]
Length = 386
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 126/233 (54%), Gaps = 12/233 (5%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L + + + P ++YE MR+ + A + P LC+AACEL+GG E A+ A A+ ++H
Sbjct: 109 LDKVIPPRYPQKIYESMRYSLLAGGKRVRPILCIAACELMGGTEELAMPTACAIEMIHTM 168
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA-SSDNPAGNNSG 175
S IH++LP D L + KPT + F +T ++ DA+L E +A S+ G +
Sbjct: 169 SLIHDDLPYIDNDDL-RRGKPTNHKVFGEDTAIIAGDALLSLAFEHVAVSTSRTLGTDI- 226
Query: 176 RILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHA 235
ILR++ E+ RA GS+GV+ GQ +++ S+ D D+E + K L
Sbjct: 227 -ILRLLSEIGRATGSEGVMGGQVVDIE-SEGDPS-------IDLETLEWVHIHKTAVLLE 277
Query: 236 CGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
C CGAI+GG SE +IE RRY VG++ +V L ++ EEL K A K
Sbjct: 278 CSVVCGAIMGGASEDDIERARRYARCVGLLFQVVDDILDVSQSSEELGKTAGK 330
>gi|336359762|gb|AEI53622.1| chloroplast geranylgeranyl diphosphate synthase [Catharanthus
roseus]
Length = 383
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 136/248 (54%), Gaps = 15/248 (6%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K+Y + L AV+V+EP++++E MR+ + A + P LC+AACEL GG
Sbjct: 93 KAYMIGKANSVNKALEDAVLVREPLKIHESMRYSLLAGGKRVRPMLCIAACELFGGTESV 152
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ +A A+ ++H S +H++LP D L + KPT + F + +L DA+L F E
Sbjct: 153 AMPSACAVEMIHTMSLMHDDLPCMDNDDL-RRGKPTNHKVFGEDVAVLAGDALLAFAFEH 211
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+A++ G +S RI+RV+ E+ + +GS+G+V GQ ++ CS+ GI DV +
Sbjct: 212 IATATK--GVSSERIVRVVGELAKCIGSEGLVAGQVVDV-CSE---------GIADVGLE 259
Query: 223 YETY--KKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
+ + K L GAI+GG ++++I LR++ +G++ +V L T+ +
Sbjct: 260 HLEFIHIHKTAALLEGSVVLGAIVGGANDEQISKLRKFARCIGLLFQVVDDILDVTKSSQ 319
Query: 281 ELKKLAFK 288
EL K A K
Sbjct: 320 ELGKTAGK 327
>gi|13431546|sp|Q42698.1|GGPPS_CATRO RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
Short=GGPP synthase; Short=GGPS; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|1063276|emb|CAA63486.1| geranylgeranyl pyrophosphate synthase [Catharanthus roseus]
Length = 357
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 136/248 (54%), Gaps = 15/248 (6%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K+Y + L AV+V+EP++++E MR+ + A + P LC+AACEL GG
Sbjct: 67 KAYMIGKANSVNKALEDAVLVREPLKIHESMRYSLLAGGKRVRPMLCIAACELFGGTESV 126
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ +A A+ ++H S +H++LP D L + KPT + F + +L DA+L F E
Sbjct: 127 AMPSACAVEMIHTMSLMHDDLPCMDNDDL-RRGKPTNHKVFGEDVAVLAGDALLAFAFEH 185
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+A++ G +S RI+RV+ E+ + +GS+G+V GQ ++ CS+ GI DV +
Sbjct: 186 IATATK--GVSSERIVRVVGELAKCIGSEGLVAGQVVDV-CSE---------GIADVGLE 233
Query: 223 YETY--KKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
+ + K L GAI+GG ++++I LR++ +G++ +V L T+ +
Sbjct: 234 HLEFIHIHKTAALLEGSVVLGAIVGGANDEQISKLRKFARCIGLLFQVVDDILDVTKSSQ 293
Query: 281 ELKKLAFK 288
EL K A K
Sbjct: 294 ELGKTAGK 301
>gi|224080676|ref|XP_002306207.1| predicted protein [Populus trichocarpa]
gi|222849171|gb|EEE86718.1| predicted protein [Populus trichocarpa]
Length = 258
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 116/217 (53%), Gaps = 19/217 (8%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAP-ALCVAACELVGGHRE 101
K+YWT++ +I L QAV ++ P ++YE MR+ V A AP +CVAACEL GG+R
Sbjct: 55 KTYWTTLIGEINQELDQAVPIQYPDKIYEAMRYSVLAKGAKRAPPVMCVAACELFGGNRL 114
Query: 102 QAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE 161
A A AL ++HAAS IH++LP D + +P+ + + + +L DA+ P G
Sbjct: 115 AAFPTACALEMVHAASLIHDDLPCMDDDP-SRRGQPSNHTIYGVDMAILAGDALFPLGFS 173
Query: 162 LLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEM 221
+ S R+LRV+ E+ RA+GS+G+ GQ+ +L+ G VE
Sbjct: 174 HIVSQTPSDLVPEPRLLRVIAEIARAVGSRGMAAGQFLDLE-----------GGPNAVEF 222
Query: 222 TYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRY 258
E KK G + C A CG +L G ++ EI RRY
Sbjct: 223 VQE---KKYGEMGECSAVCGGLLAGATDDEI---RRY 253
>gi|224285135|gb|ACN40295.1| unknown [Picea sitchensis]
Length = 382
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 127/233 (54%), Gaps = 12/233 (5%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L +AV ++ P +++E MR+ + + + P LC+AACELVGG E A+ A A+ ++H
Sbjct: 105 LDRAVPLRFPQKLHESMRYSILSGGKRVRPVLCIAACELVGGTEELAMPIACAIEMIHVM 164
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA-SSDNPAGNNSG 175
+ +H+++P D I + KPT + F T L+ A+L E +A S+ GN+
Sbjct: 165 TLLHDDMPCLDNDD-IRRGKPTNHKVFGEGTALIAGVALLSVAFEHIAVSTSKTVGND-- 221
Query: 176 RILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHA 235
RILR++ E+ R GSQG++ GQ+ +L + D +N ++ + K L
Sbjct: 222 RILRMVSELGRTTGSQGIMGGQFLDL----VSEGDASVN----LQTLQWIHAHKTAVLLE 273
Query: 236 CGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
CGAI+GG SE EIE +RRY VG++ +V L T+ EEL K A K
Sbjct: 274 SSVVCGAIIGGASEDEIERIRRYASCVGILFQVVDDILDVTKSSEELGKTAGK 326
>gi|290575616|gb|ADD49735.1| geranylgeranyl diphosphate synthase [Nicotiana tabacum]
Length = 365
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 129/232 (55%), Gaps = 12/232 (5%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L A+ ++EP++++E MR+ + A + P LC+A+CE+VGG AI AA ++ ++H
Sbjct: 90 LDDAIPMQEPIKIHEAMRYSLLAGGKRVRPILCMASCEVVGGDESLAIPAACSVEMIHTM 149
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGR 176
S IH++LP D L + KPT + AF +T +L DA+L E +AS R
Sbjct: 150 SLIHDDLPCMDNDDL-RRGKPTSHKAFGEDTAVLTGDALLSLAFEHVASKTKDV--TPQR 206
Query: 177 ILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHAC 236
+++ + E+ A+GS+G+V GQ ++ + K +T++E + K G+L
Sbjct: 207 VVQAVGELGSAVGSKGLVAGQIVDIA------SEGKQVSLTELEY---IHNHKTGKLLEA 257
Query: 237 GAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
CGAI+GGG+E E+E +R Y +G++ +V L T+ EEL K A K
Sbjct: 258 AVVCGAIIGGGNEIEVERMRNYARCLGLLFQVVDDILDVTKSSEELGKTAGK 309
>gi|215433848|gb|ACJ66778.1| geranylgeranyl diphosphate synthase [Salvia miltiorrhiza]
Length = 364
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 129/250 (51%), Gaps = 11/250 (4%)
Query: 39 PNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGG 98
P +Y + L AV V+ P +++ MR+ + A + P LC+AACE+VGG
Sbjct: 70 PFNFNAYVVEKANHVNKALDDAVAVRNPPMIHDAMRYSLLAGGKRVRPMLCIAACEIVGG 129
Query: 99 HREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPF 158
+ AI AA A+ ++H S IH++LP D L + KPT + F + +L DA+L F
Sbjct: 130 PQSAAIPAACAVEMIHTMSLIHDDLPCMDNDDL-RRGKPTNHKVFGKDVAVLAGDALLAF 188
Query: 159 GLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITD 218
E +A++ G RIL + E+ +A+G++G+V GQ +L C+ D + L+ +
Sbjct: 189 AFEFMATATT--GVAPERILAAVGELAKAIGTEGLVAGQVVDLNCTG--DANVGLDTLEF 244
Query: 219 VEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEE 278
+ + K L GAILGGGS +IE LR + +G++ +V L T+
Sbjct: 245 IHI------HKTAALLEASVVLGAILGGGSSDQIEKLRTFARKIGLLLQVVDDILDVTKS 298
Query: 279 IEELKKLAFK 288
EEL K A K
Sbjct: 299 SEELGKTAGK 308
>gi|325516280|gb|ADZ24718.1| geranylgeranyl pyrophosphate synthase 1 [Solanum pennellii]
Length = 365
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 140/266 (52%), Gaps = 27/266 (10%)
Query: 23 PSLSYRPMMVTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPV 82
P ++ MVT A+ NK+ L +A+ ++EP++V+E MR+ + A
Sbjct: 71 PEFEFQEYMVTKAIKV---NKA------------LDEAIPMQEPIKVHEAMRYSLLAGGK 115
Query: 83 NMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHA 142
+ P LC+A+CE+VGG AI AA A+ ++H S +H++LP D L + KPT +
Sbjct: 116 RVRPILCMASCEVVGGDESLAIPAACAVEMIHTMSLVHDDLPCMDNDDL-RRGKPTNHKV 174
Query: 143 FKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQ 202
F NT +L DA+L E +A+ R+++ + E+ A+GS+G+V GQ +L
Sbjct: 175 FGENTAVLAGDALLSLAFEHVATKTQNVAPQ--RVVQAIGELGSAVGSEGLVAGQIVDLA 232
Query: 203 CSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYV 262
+ K +T++E ++ K +L CGAI+GGG+E ++E +R Y +
Sbjct: 233 ------SEGKQVSLTELEYIHQ---HKTAKLLEAAVVCGAIMGGGNEVDVERMRSYARCI 283
Query: 263 GMIQGIVSRRLGPTEEIEELKKLAFK 288
G++ +V L T+ +EL K A K
Sbjct: 284 GLLFQVVDDILDVTKSSDELGKTAGK 309
>gi|224096916|ref|XP_002310785.1| predicted protein [Populus trichocarpa]
gi|222853688|gb|EEE91235.1| predicted protein [Populus trichocarpa]
Length = 365
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/251 (33%), Positives = 135/251 (53%), Gaps = 21/251 (8%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
KSY + L AV +KEP +++E MR+ + A + P LC+AAC+LVGG
Sbjct: 75 KSYMLQKANSVNKALDAAVSLKEPAKIHESMRYSLLAGGKRVRPVLCLAACDLVGGSESM 134
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ AA A+ ++H S +H++LP D L + KPT + F + +L DA+L F E
Sbjct: 135 ALPAACAVEMIHTMSLMHDDLPCMDNDDL-RRGKPTNHIVFGEDVAVLAGDALLSFAFEH 193
Query: 163 LASSD---NPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDV 219
+A S +P RI+R + E+ +A+G++G+V GQ ++ CS+ G+++V
Sbjct: 194 IAVSTIHVSPL-----RIVRAIGELAKAIGAEGLVAGQVVDI-CSE---------GLSEV 238
Query: 220 --EMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTE 277
E + K +L GAILGGG+++E+E LR Y +G++ +V L T+
Sbjct: 239 GLEQLEFIHVHKTAKLLEGAVVLGAILGGGTDEEVEKLRTYARSIGLLFQVVDDILDVTK 298
Query: 278 EIEELKKLAFK 288
+EL K A K
Sbjct: 299 SSQELGKTAGK 309
>gi|290575614|gb|ADD49734.1| geranylgeranyl diphosphate synthase [Nicotiana tabacum]
Length = 366
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 134/246 (54%), Gaps = 11/246 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K+Y + L +AV+VK+P ++E MR+ + A + P LC+AACELVGG +
Sbjct: 76 KTYVAEKAISVNKALDEAVIVKDPPVIHEAMRYSLLAGGKRVRPMLCLAACELVGGDQSN 135
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ AA A+ ++H S IH++LP D L + KPT + + + +L D++L F E
Sbjct: 136 AMPAACAVEMIHTMSLIHDDLPCMDNDDL-RRGKPTNHKVYGEDVAVLAGDSLLAFAFEY 194
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+A++ AG + RIL + E+ +++G++G+V GQ ++ C+ + G+ +E
Sbjct: 195 IATA--TAGVSPSRILAAIGELAKSIGTEGLVAGQVADIACTGNPN-----VGLDTLEF- 246
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
+ K L GAILGGG+++E+E LR + +G++ +V L T+ E L
Sbjct: 247 --IHIHKTAALLEASVVLGAILGGGTDEEVEKLRIFARCIGLLFQVVDDILDVTKSSEVL 304
Query: 283 KKLAFK 288
K A K
Sbjct: 305 GKTAGK 310
>gi|56122556|gb|AAV74396.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
palaestina]
Length = 310
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 136/248 (54%), Gaps = 15/248 (6%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K+Y + + L AV+++EP +++E MR+ + A + P LC+AACELVGG+
Sbjct: 20 KAYLLEKGKSVNQALDNAVLIREPEKIHEAMRYSLLAGGKRVRPILCIAACELVGGNESM 79
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ +A A+ ++H S +H++LP D L + KPT + + N +L DA+L F E
Sbjct: 80 AMPSACAVEMIHTMSLMHDDLPCMDNDDL-RRGKPTNHKVYGENVAVLAGDALLAFAFEY 138
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+A++ G + R++R + E+ + +GS+G+V GQ ++ + G++++ +
Sbjct: 139 VANA--TVGVSPSRVIRAIGELAKDIGSEGLVAGQVVDILSA----------GMSNIGLD 186
Query: 223 YETY--KKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
+ + K L GAILGGG+++++E LR++ +G++ +V L T E
Sbjct: 187 HLEFIHLHKTAALLEASVVIGAILGGGTDEQVERLRKFARCIGLLFQVVDDILDVTMSSE 246
Query: 281 ELKKLAFK 288
EL K A K
Sbjct: 247 ELGKTAGK 254
>gi|302770449|ref|XP_002968643.1| hypothetical protein SELMODRAFT_231193 [Selaginella moellendorffii]
gi|300163148|gb|EFJ29759.1| hypothetical protein SELMODRAFT_231193 [Selaginella moellendorffii]
Length = 327
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 134/247 (54%), Gaps = 12/247 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELV-GGHRE 101
+SY + A L +A+ ++ P +++E MR+ + A + P LC+AA E++ GG +E
Sbjct: 36 QSYLQFKGVAVNAALDEALPMRYPDKIHEAMRYSLLAGGKRVRPILCIAASEMIPGGTQE 95
Query: 102 QAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE 161
A+ +A A+ ++H S IH++LP D L + KPT + AF +T +L DAML E
Sbjct: 96 AAMPSAIAMEMIHTMSLIHDDLPCMDNDDL-RRGKPTCHKAFGEDTAVLAGDAMLSLAFE 154
Query: 162 LLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEM 221
+A AG + R++R++ E+ A+GSQG+V GQ ++ C + D++M
Sbjct: 155 HIARCS--AGVPAERVVRIVSELGSAVGSQGLVAGQIVDIACEGKEG--------VDLDM 204
Query: 222 TYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEE 281
+ K G+L CGAI GG SE+E+ +R Y VG++ +V L T+ +E
Sbjct: 205 LRYIHIHKTGKLLEAAGVCGAIAGGASEEEVGRVRSYSQAVGLLFQVVDDILDVTKSSQE 264
Query: 282 LKKLAFK 288
L K A K
Sbjct: 265 LGKTAGK 271
>gi|167999215|ref|XP_001752313.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696708|gb|EDQ83046.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 288
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 126/232 (54%), Gaps = 11/232 (4%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L +AV ++ P ++ E MR+ + A + PALC+AACELVGG+ E ++ AA A+ ++H
Sbjct: 12 LDKAVPMQYPEKIREAMRYSLLAGGKRVRPALCIAACELVGGNEEMSMPAACAMEMVHTM 71
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGR 176
S IH++LP D L + KPT + F +T +L DA+L + E +A + G + R
Sbjct: 72 SLIHDDLPCMDNDDL-RRGKPTNHKVFGEDTAVLAGDALLTYAFEHIAR--DTTGVPADR 128
Query: 177 ILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHAC 236
+LRV+ + +A+GS+G+V GQ ++ S+ D +E + K L
Sbjct: 129 VLRVIAHLGKAVGSEGLVAGQIVDI-ASEGDP-------TVGLETLEYVHTHKTAVLLES 180
Query: 237 GAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
CGAILGG SE EI L +Y VG++ +V L T+ EL K A K
Sbjct: 181 SVVCGAILGGASEDEISRLSKYARNVGLLFQVVDDILDVTKSSAELGKTAGK 232
>gi|237783596|gb|ACR19637.1| geranylgeranyl diphosphate synthase [Salvia miltiorrhiza]
Length = 364
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 129/250 (51%), Gaps = 11/250 (4%)
Query: 39 PNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGG 98
P +Y + L AV V+ P +++ MR+ + A + P LC+AACE+VGG
Sbjct: 70 PFNFNAYVVEKANHVNKALDDAVAVRNPPMIHDAMRYSLLAGGKRVRPMLCIAACEIVGG 129
Query: 99 HREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPF 158
+ AI AA A+ ++H S IH++LP D L + KPT + F + +L DA+L F
Sbjct: 130 PQSAAIPAACAVEMIHTMSLIHDDLPCMDNDDL-RRGKPTNHKVFGEDVAVLAGDALLAF 188
Query: 159 GLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITD 218
E +A++ G RIL + E+ +A+G++G+V GQ +L C+ D + L+ +
Sbjct: 189 AFEFMATATT--GVAPERILAAVGELAKAIGTEGLVAGQVVDLNCTG--DANVGLDTLEF 244
Query: 219 VEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEE 278
+ + K L GAILGGGS +IE LR + +G++ +V L T+
Sbjct: 245 IHI------HKTAALLEASVVLGAILGGGSSDQIEKLRTFARKIGLLFQVVDDILDVTKS 298
Query: 279 IEELKKLAFK 288
EEL K A K
Sbjct: 299 SEELGKTAGK 308
>gi|4958918|dbj|BAA78046.1| GGPP synthase [Daucus carota]
Length = 366
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 137/246 (55%), Gaps = 10/246 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
KSY + L +V ++EPV+++E MR+ + A + P L +AACEL GGH
Sbjct: 75 KSYMLEKAISVNKALDASVSLQEPVKIHESMRYSLLAGGKRVRPLLSIAACELFGGHEAV 134
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ +A A+ ++H S +H++LP D L + KPT + + + +L DAML
Sbjct: 135 AMPSACAVEMIHTMSLMHDDLPFMDNDDL-RRGKPTNHKVYGESVAVLAGDAMLALAAFH 193
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
L +++ G +S +++RV+VE+ +A+G++G+V GQ ++ C + D L G+ D+E
Sbjct: 194 LVATET-RGVSSDQVVRVIVELAKAIGAEGLVAGQIVDV----CSEGDPNL-GLEDLEF- 246
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
++ K L GAILGG +++E+E +R+Y +G++ +V L T+ +EL
Sbjct: 247 --IHRSKTAALLEGSVVMGAILGGANDEEVEKVRKYARCIGLLFQVVDDILDVTKSSKEL 304
Query: 283 KKLAFK 288
K A K
Sbjct: 305 GKTAGK 310
>gi|159490409|ref|XP_001703169.1| geranylgeranyl diphosphate synthase [Chlamydomonas reinhardtii]
gi|158270709|gb|EDO96545.1| geranylgeranyl diphosphate synthase [Chlamydomonas reinhardtii]
Length = 345
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 144/282 (51%), Gaps = 19/282 (6%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
+Y + + + +AV +K P + E MR+ + A + PALC+AACELVGG A
Sbjct: 57 TYMVDRAKLVNKAMDEAVPLKYPETLNESMRYSLLAGGKRVRPALCLAACELVGGDIHAA 116
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ AA A+ ++H S IH++LP D + +PT + + + +L DA+L F E +
Sbjct: 117 LPAACAMEMVHTMSLIHDDLPSMDNDDF-RRGRPTNHKVYGEDIAILAGDALLSFSFEHI 175
Query: 164 ASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTY 223
A + G + R+LRV++E+ +A+G G+V GQ ++Q +D+++ +++
Sbjct: 176 ARATK--GVPAERVLRVIMELGKAVGQDGLVAGQVVDIQS-----EDKEVG----LDVLK 224
Query: 224 ETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELK 283
++ K L CGAILGG E IE LR+Y +G+ ++ L T E+L
Sbjct: 225 YIHEHKTAALLEASVVCGAILGGADESTIEKLRKYSLNIGLAFQVIDDILDVTATTEQLG 284
Query: 284 KLAFKLREVNSFN-------DENAEVIFSLVDDNITHVLGFN 318
K A K VN +++ +V L+ + I + GF+
Sbjct: 285 KTAAKDLAVNKTTYPKLLGLEKSKQVADDLIKEAIQQLDGFD 326
>gi|558925|gb|AAA86688.1| geranylgeranyl pyrophosphate synthase [Lupinus albus]
Length = 316
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 128/245 (52%), Gaps = 13/245 (5%)
Query: 45 YWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAI 104
Y + L AV ++EP +++E MR+ + A + P LC+AACE+VGG+ A+
Sbjct: 28 YMVEKSRSVNQALNDAVSLREPHKIHEAMRYSLLAGGKRVRPVLCIAACEVVGGNESTAM 87
Query: 105 VAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA 164
AA ++ ++H S IH++LP D L + KPT + F N +L DA+L F E +A
Sbjct: 88 AAACSIEMIHTMSLIHDDLPCMDNDDL-RRGKPTNHKVFGENIAVLAGDALLAFAFEHIA 146
Query: 165 SSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ-CDDDDRKLNGITDVEMTY 223
S +G + RI+ + E+ +++G++G+V GQ ++ CD KL I
Sbjct: 147 VS--TSGVSPERIIGAIGELAKSIGTEGLVAGQVVDINSEGLCDIGLEKLEFI------- 197
Query: 224 ETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELK 283
+ K L GAILGGG +E+E LR + Y+G++ +V L T+ +EL
Sbjct: 198 --HLHKTAALLEGSVVVGAILGGGCNEEVEKLRMFARYIGLMFQVVDDVLDVTKSSKELG 255
Query: 284 KLAFK 288
K A K
Sbjct: 256 KTAGK 260
>gi|22535959|gb|AAN01134.1| geranyl diphosphate synthase [Abies grandis]
Length = 381
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 134/265 (50%), Gaps = 18/265 (6%)
Query: 32 VTMAMSTPNKNKS--------YWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVN 83
V ++ P K K Y S + L +A+ ++ P ++YE MR+ + A
Sbjct: 71 VAQLLNPPQKGKKAVEFDFNKYMDSKAMTVNEALNKAIPLRYPQKIYESMRYSLLAGGKR 130
Query: 84 MAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAF 143
+ P LC+AACELVGG E AI A A+ ++H S +H++LP D L + KPT + F
Sbjct: 131 VRPVLCIAACELVGGTEELAIPTACAIEMIHTMSLMHDDLPCIDNDDL-RRGKPTNHKIF 189
Query: 144 KPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQC 203
+T + +A+ + E +A S + + RILR++ E+ RA GS+GV+ GQ ++
Sbjct: 190 GEDTAVTAGNALHSYAFEHIAVSTSKT-VGADRILRMVSELGRATGSEGVMGGQMVDI-A 247
Query: 204 SQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVG 263
S+ D D++ + K L C CGAI+GG SE IE RRY VG
Sbjct: 248 SEGDPS-------IDLQTLEWIHIHKTAMLLECSVVCGAIIGGASEIVIERARRYARCVG 300
Query: 264 MIQGIVSRRLGPTEEIEELKKLAFK 288
++ +V L T+ +EL K A K
Sbjct: 301 LLFQVVDDILDVTKSSDELGKTAGK 325
>gi|356538045|ref|XP_003537515.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Glycine max]
Length = 355
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 134/248 (54%), Gaps = 15/248 (6%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K Y + + L A+ +++P ++++ MR+ + A + P LC+AACELVGG
Sbjct: 65 KGYMIAKAHTVNQALDAAIALRDPHKIHQAMRYSLLAGGKRVRPVLCIAACELVGGTEAT 124
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
AI AA A+ ++H S IH++LP D L + KPT + + + +L DA+L F E
Sbjct: 125 AIPAACAVEMIHTMSLIHDDLPCMDNDDL-RRGKPTNHKVYGEDVAVLAGDALLAFAFEH 183
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEM- 221
+A+S G + R++R + E+ +++G++G+V GQ ++ G+ +V +
Sbjct: 184 VAASTE--GVSPSRVVRAIGELAKSIGTEGLVAGQVVDIDS----------EGVANVGLE 231
Query: 222 TYE-TYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
T E + K L GAI+GGGS++E+E LR++ +G++ +V L T+ E
Sbjct: 232 TLEFIHVHKTAALLEAAVVLGAIVGGGSDEEVEKLRKFARCIGLLFQVVDDILDVTKSSE 291
Query: 281 ELKKLAFK 288
EL K A K
Sbjct: 292 ELGKTAGK 299
>gi|289526777|pdb|3KRA|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium
gi|289526780|pdb|3KRA|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium
gi|289526781|pdb|3KRC|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp
gi|289526784|pdb|3KRC|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp
gi|289526785|pdb|3KRF|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (I)
gi|289526788|pdb|3KRF|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (I)
gi|289526789|pdb|3KRO|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (Ii)
gi|289526792|pdb|3KRO|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (Ii)
gi|289526793|pdb|3KRP|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium And Gpp
gi|289526796|pdb|3KRP|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium And Gpp
gi|310942863|pdb|3OAB|A Chain A, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942866|pdb|3OAB|D Chain D, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942867|pdb|3OAC|A Chain A, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942870|pdb|3OAC|D Chain D, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
Length = 295
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 134/246 (54%), Gaps = 15/246 (6%)
Query: 45 YWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAI 104
Y + + L AV +KEP++++E MR+ + A + P LC+AACELVGG A+
Sbjct: 7 YMLRKAKSVNKALEAAVQMKEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGDESTAM 66
Query: 105 VAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA 164
AA A+ ++H S +H++LP D L + KPT + AF + +L DA+L F E +A
Sbjct: 67 PAACAVEMIHTMSLMHDDLPCMDNDDL-RRGKPTNHMAFGESVAVLAGDALLSFAFEHVA 125
Query: 165 SSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYE 224
++ G RI+RV+ E+ ++GS+G+V GQ ++ CS+ G+ +V + +
Sbjct: 126 AATK--GAPPERIVRVLGELAVSIGSEGLVAGQVVDV-CSE---------GMAEVGLDHL 173
Query: 225 TY--KKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
+ K L GAILGGG E+E+ LR++ +G++ +V L T+ +EL
Sbjct: 174 EFIHHHKTAALLQGSVVLGAILGGGKEEEVAKLRKFANCIGLLFQVVDDILDVTKSSKEL 233
Query: 283 KKLAFK 288
K A K
Sbjct: 234 GKTAGK 239
>gi|6449052|gb|AAF08793.1|AF182828_1 geranyl diphosphate synthase large subunit [Mentha x piperita]
gi|10637876|emb|CAC10561.1| gpp synthase large subunit [Mentha x piperita]
gi|158979013|gb|ABW86879.1| geranyl pyrophosphate synthase large subunit [Mentha x piperita]
Length = 377
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 131/234 (55%), Gaps = 15/234 (6%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L AV +KEP++++E MR+ + A + P LC+AACELVGG A+ AA A+ ++H
Sbjct: 101 LEAAVQMKEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGDESTAMPAACAVEMIHTM 160
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGR 176
S +H++LP D L + KPT + AF + +L DA+L F E +A++ G R
Sbjct: 161 SLMHDDLPCMDNDDL-RRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAATK--GAPPER 217
Query: 177 ILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETY--KKKEGRLH 234
I+RV+ E+ ++GS+G+V GQ ++ CS+ G+ +V + + + K L
Sbjct: 218 IVRVLGELAVSIGSEGLVAGQVVDV-CSE---------GMAEVGLDHLEFIHHHKTAALL 267
Query: 235 ACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GAILGGG E+E+ LR++ +G++ +V L T+ +EL K A K
Sbjct: 268 QGSVVLGAILGGGKEEEVAKLRKFANCIGLLFQVVDDILDVTKSSKELGKTAGK 321
>gi|405789932|gb|AFS28709.1| putative geranylgeranyl pyrophosphate synthase, partial [Olea
europaea]
Length = 251
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 131/229 (57%), Gaps = 11/229 (4%)
Query: 60 AVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFI 119
AV+++EP++++E MR+ + A + P LC+AACELVGG A+ +A A+ ++H S +
Sbjct: 1 AVLLQEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGEESTAMPSACAVEMIHTMSLM 60
Query: 120 HENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILR 179
H++LP D L + KPT + F + +L DA+L + E +A + G S RI+R
Sbjct: 61 HDDLPFMDNDDL-RRGKPTNHKIFGEDVTVLAGDALLAYAFEHMAVATK--GVPSERIVR 117
Query: 180 VMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAA 239
V+ E+ + +GS+G+V GQ ++ CS+ + D G+ +E + K L
Sbjct: 118 VIGELAKCIGSEGLVAGQVVDI-CSEGNSD----VGLDHLEF---IHIHKTAALLEGSVV 169
Query: 240 CGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GAILGG +++E+E LR++ +G++ +V L T+ +EL K A K
Sbjct: 170 LGAILGGANDQEVEKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGK 218
>gi|56122554|gb|AAV74395.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
palaestina]
Length = 364
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 148/288 (51%), Gaps = 25/288 (8%)
Query: 13 HVAPRRNHSRPSLSYR-PMMVTMAMSTPNKNK---------SYWTSVHEDIGAHLRQAVV 62
H P S LS++ P+ +T NK K +Y + + L A++
Sbjct: 34 HNKPVSPKSTKPLSFKTPISSVYLTNTENKGKDKEMTFDFKAYLLEKGKSVNQALDNAIL 93
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
++EP +++E MR+ + A + P LC+AA ELVGG+ A+ +A A+ ++H S IH++
Sbjct: 94 IREPEKIHEAMRYSLLAGGKRVRPILCIAASELVGGNESMAMPSACAVEMIHTMSLIHDD 153
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D L + KPT + + N +L DA+L F E +A++ G + R++R +
Sbjct: 154 LPCMDNDDL-RRGKPTNHKVYGENVAVLAGDALLAFAFEYVANA--TVGVSPSRVVRAIG 210
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETY--KKKEGRLHACGAAC 240
E+ + +GS+G+V GQ ++ + G++++ + + + K L
Sbjct: 211 ELAKDIGSEGLVAGQVVDILSA----------GMSNIGLDHLEFIHLHKTAALLEASVVI 260
Query: 241 GAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GAILGGG+++++E LR++ +G++ +V L T EEL K A K
Sbjct: 261 GAILGGGTDEQVERLRKFARCIGLLFQVVDDILDVTMSSEELGKTAGK 308
>gi|170077705|ref|YP_001734343.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7002]
gi|169885374|gb|ACA99087.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7002]
Length = 302
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 125/235 (53%), Gaps = 18/235 (7%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L Q++V+ EPV +YE MR+ + A + P LC+AACE++GG A+ A AL ++H
Sbjct: 28 LDQSLVITEPVTIYEAMRYSLLAGGKRLRPILCLAACEMLGGTAAMAMNTACALEMIHTM 87
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASS-DNPAGNNSG 175
S IH++LP D L + KPT + + + +L DA+L + E +A + D PA
Sbjct: 88 SLIHDDLPAMDNDDL-RRGKPTNHKVYGEDIAILAGDALLSYAFEYVARTPDVPA----E 142
Query: 176 RILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITD--VEMTYETYKKKEGRL 233
R+L+V+V + +A+G++G+V GQ +L+ G TD VE + K G L
Sbjct: 143 RLLQVIVRLGQAVGAEGLVGGQVVDLES----------EGKTDVAVETLNFIHTHKTGAL 192
Query: 234 HACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GAIL G +E++LL RY +G+ IV L T EEL K A K
Sbjct: 193 LEVCVTAGAILAGAKPEEVQLLSRYAQNIGLAFQIVDDILDITATAEELGKTAGK 247
>gi|374639381|gb|AEZ55679.1| geranyl diphosphate synthase small subunit type II.1 [Salvia
miltiorrhiza]
Length = 290
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 138/291 (47%), Gaps = 37/291 (12%)
Query: 8 LNLPAHVAPRRNHSRPSLSY--RPMMVTMAMSTPNKN---KSYWTSVHEDIGAHLRQAVV 62
+ L V P N P + R + + A S P ++YWTS+ D+ L AV
Sbjct: 1 MALSIAVTPSSNSRMPRTAVLRRAVRCSSAASVPTTQPDLRNYWTSLISDVDRKLNDAVP 60
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAP-ALCVAACELVGGHREQAIVAAAALHVMHAASFIHE 121
+K P ++E MR+ + A AP +C+AACEL GG R AI AL ++HAASF+H+
Sbjct: 61 LKYPELIHESMRYSLLAKTAKRAPPVMCIAACELFGGDRAAAIPTVCALEMVHAASFVHD 120
Query: 122 NLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVM 181
+LP D +L + + + + P+ +L DA+LP + + + +LRV+
Sbjct: 121 DLPYID-DALSRRGQLPNHTLYGPDMAILAGDALLPLAFQYIVLHTPTQLVSQLHLLRVV 179
Query: 182 VEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACG 241
E+ RA+GS G+ Q+ + K G L C A CG
Sbjct: 180 QEIARAVGSTGMAATQF--------------------------IGENKFGELGRCSAVCG 213
Query: 242 AILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTE----EIEELKKLAFK 288
A+LGG S++EIE L YG VG++ +V L + +E+LK A K
Sbjct: 214 ALLGGASDEEIERLGEYGRIVGILYRVVEDMLEGKKVNIGVVEDLKSRARK 264
>gi|148887803|gb|ABR15420.1| geranyl pyrophosphate synthase large subunit [Mentha canadensis]
Length = 377
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 132/234 (56%), Gaps = 15/234 (6%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L AV +KEP++++E MR+ + A + P LC+AACELVGG A+ AA A+ ++H
Sbjct: 101 LEAAVQMKEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGDESTAMPAACAVEMIHTM 160
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGR 176
S +H++LP D L + KPT + AF + +L DA+L F E +A++ G R
Sbjct: 161 SLMHDDLPCMDNDDL-RRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAATK--GAPPER 217
Query: 177 ILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETY--KKKEGRLH 234
I+RV+ E+ ++GS+G+V GQ ++ CS+ G+ +V + + + K L
Sbjct: 218 IVRVLGELAVSVGSEGLVAGQVVDV-CSE---------GMAEVGLDHLEFIHHHKTAALL 267
Query: 235 ACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GAILGGG+E+E+ LR++ +G++ +V L T+ +EL K A K
Sbjct: 268 QGSVVLGAILGGGNEEEVAKLRKFANCIGLLFQVVDDILDVTKSSKELGKKAGK 321
>gi|350538439|ref|NP_001234087.1| geranylgeranyl pyrophosphate synthase 1 [Solanum lycopersicum]
gi|82547880|gb|ABB82554.1| geranylgeranyl pyrophosphate synthase 1 [Solanum lycopersicum]
Length = 365
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 139/266 (52%), Gaps = 27/266 (10%)
Query: 23 PSLSYRPMMVTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPV 82
P ++ MVT A+ NK+ L +A+ ++EP++V+E MR+ + A
Sbjct: 71 PEFEFQEYMVTKAIKV---NKA------------LDEAIPMQEPIKVHEAMRYSLLAGGK 115
Query: 83 NMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHA 142
+ P LC+A+CE+VGG AI AA A+ ++H S +H++LP D L + KPT +
Sbjct: 116 RVRPILCMASCEVVGGDESLAIPAACAVEMIHTMSLVHDDLPCMDNDDL-RRGKPTNHKI 174
Query: 143 FKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQ 202
F NT +L DA+L E +A+ R+++ + E+ A+GS+G+V GQ +L
Sbjct: 175 FGENTAVLAGDALLSLAFEHVATKTQNVPPQ--RVVQAIGELGSAVGSEGLVAGQIVDLA 232
Query: 203 CSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYV 262
+ K +T++E + K +L CGAI+GGG+E ++E +R Y +
Sbjct: 233 ------SEGKQVSLTELEYIHH---HKTSKLLEAAVVCGAIMGGGNEVDVERMRSYARCI 283
Query: 263 GMIQGIVSRRLGPTEEIEELKKLAFK 288
G++ +V L T+ +EL K A K
Sbjct: 284 GLLFQVVDDILDVTKSSDELGKTAGK 309
>gi|302816429|ref|XP_002989893.1| hypothetical protein SELMODRAFT_235899 [Selaginella moellendorffii]
gi|300142204|gb|EFJ08906.1| hypothetical protein SELMODRAFT_235899 [Selaginella moellendorffii]
Length = 366
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 133/247 (53%), Gaps = 12/247 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELV-GGHRE 101
+SY + A L +A+ ++ P +++E MR+ + A + P LC+AA E++ GG +E
Sbjct: 75 QSYLQFKGVAVNAALDEALPMRYPDKIHEAMRYSLLAGGKRVRPILCIAASEMIPGGTQE 134
Query: 102 QAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE 161
A+ +A A+ ++H S IH++LP D L + KPT + AF +T +L DAML E
Sbjct: 135 AAMPSAIAMEMIHTMSLIHDDLPCMDNDDL-RRGKPTCHKAFGEDTAVLAGDAMLSLAFE 193
Query: 162 LLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEM 221
+A AG + R++R++ E+ A+GSQG+V GQ ++ C + D++
Sbjct: 194 HIARCS--AGVPAERVVRIVSELGSAVGSQGLVAGQIVDIACEGKEG--------VDLDT 243
Query: 222 TYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEE 281
+ K G+L CGAI GG SE+E+ +R Y VG++ +V L T+ +E
Sbjct: 244 LRYIHIHKTGKLLEAAGVCGAIAGGASEEEVGRVRSYSQAVGLLFQVVDDILDVTKSSQE 303
Query: 282 LKKLAFK 288
L K A K
Sbjct: 304 LGKTAGK 310
>gi|297832526|ref|XP_002884145.1| geranylgeranyl diphosphate synthase [Arabidopsis lyrata subsp.
lyrata]
gi|297329985|gb|EFH60404.1| geranylgeranyl diphosphate synthase [Arabidopsis lyrata subsp.
lyrata]
Length = 329
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 124/245 (50%), Gaps = 24/245 (9%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
SY + L AV ++EP++++E MR+ + A + P LC+AACELVGG A
Sbjct: 53 SYMIGKANSVNKALDSAVSLREPIKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEEFLA 112
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ AA A+ ++H S IH++LP F + +L DA+L F E L
Sbjct: 113 LPAACAVEMIHTMSLIHDDLPF-----------------FGEDVAVLAGDALLSFAFEHL 155
Query: 164 ASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTY 223
A ++ P + R++R + E+ +A+GS+G+V GQ +L D +D L E+
Sbjct: 156 A-TETPEIISPARVVRAIGELAKAIGSEGLVAGQVVDLTSEGMDQNDVGL------ELLE 208
Query: 224 ETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELK 283
+ K L GAI GGG+ +EIE LR++ +G++ +V L T+ EEL
Sbjct: 209 FIHLHKTAVLLEAATVLGAIFGGGTNEEIERLRKFARCIGLLFQVVDDILDVTKSSEELG 268
Query: 284 KLAFK 288
K A K
Sbjct: 269 KTAGK 273
>gi|291170333|gb|ADD82422.1| geranylgeranyl diphosphate synthase [Jatropha curcas]
Length = 370
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 143/269 (53%), Gaps = 18/269 (6%)
Query: 21 SRPSLSYRPMMVTMAMSTPN-KNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFA 79
++ SLS+ P ++ PN + Y ++ L +AV + P++++ MR+ + A
Sbjct: 63 TQESLSFSPKILL-----PNFPFEEYMVLKANNVNEALDKAVPLNHPLKIHAAMRYSLLA 117
Query: 80 APVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTM 139
+ P LC+AACELVGG A+ +A A+ ++H S IH++LP D L + KPT
Sbjct: 118 GGKRVRPILCIAACELVGGDEAAAMPSACAMEMIHTMSLIHDDLPCMDNDDL-RRGKPTN 176
Query: 140 YHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYN 199
+ F T +L DAML E +A + + R++RV+ E+ A+GS+G+V GQ
Sbjct: 177 HKMFGEETAILAGDAMLSLAFEHIARATKNV--SPERVVRVITELGSAVGSEGLVAGQIV 234
Query: 200 ELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYG 259
++ CS+ +++N + D+E + K +L CGAI GG ++ IE +R+Y
Sbjct: 235 DV-CSE----GKEVN-VKDLEY---IHIHKTAKLLEAAVVCGAIAGGADDESIERVRKYA 285
Query: 260 FYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
+G++ ++ L T+ EEL K A K
Sbjct: 286 RCIGLLFQVIDDILDVTKSSEELGKTAGK 314
>gi|350537639|ref|NP_001234302.1| geranylgeranyl pyrophosphate synthase 2 [Solanum lycopersicum]
gi|82547882|gb|ABB82555.1| geranylgeranyl pyrophosphate synthase 2 [Solanum lycopersicum]
Length = 363
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 146/282 (51%), Gaps = 22/282 (7%)
Query: 18 RNHSRPSLSYRPM--MVTMAMSTPNK---------NKSYWTSVHEDIGAHLRQAVVVKEP 66
R + SLSYR + A++T K K Y + L +A++VK+P
Sbjct: 37 RKILKQSLSYRTFSSLTVSAIATNEKVVMEKEEFNFKVYVAEKAICVNKALDEAIMVKDP 96
Query: 67 VEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLS 126
+++E MR+ + A + P LC+AACELVGG++ A+ AA A+ ++H S IH++LP
Sbjct: 97 PKIHEAMRYSLLAGGKRVRPMLCLAACELVGGNQGNAMAAACAVEMIHTMSLIHDDLPCM 156
Query: 127 DRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTR 186
D L + KPT + + + +L DA+L F E LA++ G RIL + E+ +
Sbjct: 157 DDDDL-RRGKPTNHKVYGEDVAVLAGDALLAFAFEYLATATT--GVPPSRILVAVAELAK 213
Query: 187 AMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGG 246
++G++G+V GQ +L C+ N +EM + K L GAILGG
Sbjct: 214 SVGTEGLVAGQVADLACTG--------NPNVGLEMLEFIHIHKTAALLEASVVIGAILGG 265
Query: 247 GSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
G+++E++ LRR+ +G++ +V L T+ EL K A K
Sbjct: 266 GADEEVDKLRRFAQCIGLLFQVVDDILDVTKSSSELGKTAGK 307
>gi|325516282|gb|ADZ24719.1| geranylgeranyl pyrophosphate synthase 2 [Solanum pennellii]
Length = 363
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 144/282 (51%), Gaps = 22/282 (7%)
Query: 18 RNHSRPSLSYRPMM-VTMAMSTPNKN----------KSYWTSVHEDIGAHLRQAVVVKEP 66
R + SL YRP VT++ N+ K Y + L +A++VK+P
Sbjct: 37 RKFLKQSLCYRPFSSVTVSAIATNEKVVMEKEEFDFKVYVAEKAICVNRALDEAIMVKDP 96
Query: 67 VEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLS 126
++E MR+ + A + P LC AACELVGG++ A+ AA A+ ++H S IH++LP
Sbjct: 97 PMIHEAMRYSLLAGGKRVRPMLCFAACELVGGNQGNAMAAACAVEMIHTMSLIHDDLPCM 156
Query: 127 DRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTR 186
D L + KPT + + + +L DA+L F E LA++ G RIL + E+ +
Sbjct: 157 DDDDL-RRGKPTNHKVYGEDVAVLAGDALLAFAFEYLATA--TIGVPPSRILVAVAELAK 213
Query: 187 AMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGG 246
++G++G+V GQ +L C+ N +EM + K L GAILGG
Sbjct: 214 SVGTEGLVAGQVADLACTG--------NPNVGLEMLEFIHIHKTAALLEASVVIGAILGG 265
Query: 247 GSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
G+++E++ LRR+ +G++ +V L T+ EL K A K
Sbjct: 266 GADEEVDKLRRFARCIGLLFQVVDDILDVTKSSSELGKTAGK 307
>gi|229915240|gb|ACQ90682.1| geranyl diphosphate synthase large subunit [Humulus lupulus]
Length = 369
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 129/246 (52%), Gaps = 11/246 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
KSY + L AV+++EP ++E MR+ + A + P LC++ACELVGG
Sbjct: 79 KSYMVQKANSVNQALDAAVLLREPQMIHEAMRYSLLAGGKRVRPVLCLSACELVGGDESV 138
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ AA A+ ++H S IH++LP D L + KPT + F + +L DA+L + E
Sbjct: 139 AMPAACAVEMIHTMSLIHDDLPCMDNDDL-RRGKPTNHKVFGEDVAVLAGDALLAYAFEH 197
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+A S G + RI+R + E+ +++GS+G+V GQ D D L + ++
Sbjct: 198 VAVS--TVGVPAARIIRAIGELAKSIGSEGLVAGQV-------VDIDSEGLANVGLEQLE 248
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
+ K L A GAILGGG+++++E LR + +G++ V L T+ +EL
Sbjct: 249 FIHLHKTAALLEA-SVVLGAILGGGTDEQVEELRSFARCIGLLFQAVDDILDVTKSSQEL 307
Query: 283 KKLAFK 288
K A K
Sbjct: 308 GKTAGK 313
>gi|6277256|dbj|BAA86285.1| geranylgeranyl pyrophosphate synthase [Scoparia dulcis]
Length = 351
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 134/248 (54%), Gaps = 15/248 (6%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K Y + L AV +KEP++++E MR+ + A + P LC+AACELVGGH
Sbjct: 61 KKYMLEKASSVNKALESAVSLKEPLKIHESMRYSLLAGGKRVRPMLCLAACELVGGHPST 120
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ AA ++ ++H S +H++LP D L + PT + F + +L DA+L + E
Sbjct: 121 AMPAACSIEMIHTMSLMHDDLPCMDNDHL-RRGHPTNHIVFGEDVAVLAGDALLAYSFEY 179
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
LA++ G RI+RV+ E+ + + S+G++ GQ ++ CS+ G++++ +
Sbjct: 180 LATATE--GVLPERIVRVIAELAKCIRSEGLLAGQVVDI-CSE---------GVSEIGLE 227
Query: 223 YETY--KKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
+ Y K L GAILGGG+++E+E LR++ +G++ +V L T+
Sbjct: 228 HLEYIHLHKTAALLEGSVVLGAILGGGNDEEVERLRKFARCIGLLFQVVDDILDVTKTSV 287
Query: 281 ELKKLAFK 288
EL K A K
Sbjct: 288 ELGKTAGK 295
>gi|428215155|ref|YP_007088299.1| geranylgeranyl pyrophosphate synthase [Oscillatoria acuminata PCC
6304]
gi|428003536|gb|AFY84379.1| geranylgeranyl pyrophosphate synthase [Oscillatoria acuminata PCC
6304]
Length = 308
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 126/238 (52%), Gaps = 15/238 (6%)
Query: 53 IGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHV 112
+ A L Q++ +K P +YE MR+ + A + P LC+A+CELVGG E A+ A AL +
Sbjct: 29 VEAALDQSLPIKPPSTIYEAMRYSLLAGGKRLRPILCLASCELVGGTVEMAMPTACALEM 88
Query: 113 MHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDN--PA 170
+H S IH++LP D + K T + + + +L D +L + E++A+ PA
Sbjct: 89 VHTMSLIHDDLPAMDNDDY-RRGKLTNHKVYGDDIAILAGDGLLVYAFEVVATQTQNVPA 147
Query: 171 GNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKE 230
R+L+ + + A G+ GVV GQ ++QC + KL+ T VE + + K
Sbjct: 148 ----PRVLKAIAHLAHAFGADGVVGGQVVDIQC------EGKLD--TTVETLHFIHTHKT 195
Query: 231 GRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
G L CGAILGG ++++++ L RY +G+ I+ L T+ EEL K A K
Sbjct: 196 GALLEACVVCGAILGGAADEDLQRLSRYAQNIGLAFQIIDDILDITKTQEELGKTAGK 253
>gi|126030920|pdb|2J1P|A Chain A, Geranylgeranyl Diphosphate Synthase From Sinapis Alba In
Complex With Ggpp
gi|126030921|pdb|2J1P|B Chain B, Geranylgeranyl Diphosphate Synthase From Sinapis Alba In
Complex With Ggpp
Length = 293
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 125/234 (53%), Gaps = 8/234 (3%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
SY + + L AV ++EP++++E R+ + A + P LC+AACELVGG A
Sbjct: 15 SYIIRKADSVNKALDSAVPLREPLKIHEAXRYSLLAGGKRVRPVLCIAACELVGGEESLA 74
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
AA A+ +H S IH++LP D L + KPT + + + +L DA+L F E L
Sbjct: 75 XPAACAVEXIHTXSLIHDDLPCXDNDDL-RRGKPTNHKVYGEDVAVLAGDALLSFAFEHL 133
Query: 164 ASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTY 223
AS+ + + R++R + E+ +A+G++G+V GQ ++ D LN + + +
Sbjct: 134 ASA-TSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLD-----LNNVGLEHLKF 187
Query: 224 ETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTE 277
K L A A G I+GGGS++EIE LR++ +G++ +V L T+
Sbjct: 188 IHLHKTAALLEA-SAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVTK 240
>gi|374639385|gb|AEZ55681.1| geranyl diphosphate synthase large subunit [Salvia miltiorrhiza]
Length = 344
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 131/248 (52%), Gaps = 15/248 (6%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K Y + + L V +KEP++++E MR+ + A + P LC+AACELVGG
Sbjct: 54 KRYMVEKADSVNKALEAVVQMKEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGEEST 113
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ AA A+ ++H S +H++LP D L + KPT + F + +L DA+L E
Sbjct: 114 AMPAACAVEMIHTMSLMHDDLPCMDNDDL-RRGKPTNHKVFGEDVAVLAGDALLSLAFEH 172
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+A + G+ RILR + ++ +++G++G+V GQ ++ CS+ G+ +V +
Sbjct: 173 VAVATR--GSAPERILRALGQLAKSIGAEGLVAGQVVDI-CSE---------GMAEVGLD 220
Query: 223 YETY--KKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
+ + K L GAILGG E+E+E LR++ +G++ +V L T+
Sbjct: 221 HLEFIHLHKTAALLQGSVVMGAILGGAKEEEVERLRKFAKCIGLMFQVVDDILDVTKSSH 280
Query: 281 ELKKLAFK 288
EL K A K
Sbjct: 281 ELGKTAGK 288
>gi|22535957|gb|AAN01133.1| geranyl diphosphate synthase [Abies grandis]
Length = 383
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/246 (35%), Positives = 124/246 (50%), Gaps = 10/246 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K Y S + L +AV ++ P +++E MR+ + A + P L +AACELVGG E
Sbjct: 92 KEYLHSKAISVNEALERAVPLRYPEKIHEAMRYSLLAGGKRIRPILTIAACELVGGSEEL 151
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ A A+ ++H S IH++LP D L + K T + F T +L DA+L F E
Sbjct: 152 AMPTACAMEMIHTMSLIHDDLPSMDNDDL-RRGKLTNHKVFGEGTAVLAGDALLSFAFEH 210
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+A S S R+LRV+ E+ +A+GSQGV GQ ++ S+ D +E
Sbjct: 211 IAVSTRKT-VASHRVLRVVSELGKAIGSQGVAGGQVADIT-SEGDPS-------VGLETL 261
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
+ K L C GAI+GG SE EIE RY VG++ +V L T EEL
Sbjct: 262 EWIHIHKTAVLLECAVVSGAIIGGASENEIERTGRYARCVGLLFQVVDDILDVTRSSEEL 321
Query: 283 KKLAFK 288
K A K
Sbjct: 322 GKTAGK 327
>gi|56122559|gb|AAV74397.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
palaestina]
Length = 359
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 127/246 (51%), Gaps = 12/246 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
+ Y + E + L +V ++ P++++E MR+ + A + P LC+A+CELVGG
Sbjct: 70 EEYMAEMAERVNQALDDSVPLRHPLKIHEAMRYSLLAGGKRVRPILCIASCELVGGDPVA 129
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A A AL ++H S IH++LP D + PT + AF T +L DA+L E
Sbjct: 130 AHPIACALEMIHTMSLIHDDLPCMDNDDF-RRGMPTNHKAFGEETAVLAGDALLSLAFEH 188
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+A+ G ++ R++RV+ E+ + +GS G+V GQ ++ + I E+
Sbjct: 189 VATRST--GVSADRVVRVIAELGKCVGSDGLVGGQIVDIASAG--------KQIELSELE 238
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
Y + K L CGAI+GGG +IE LR+Y Y+G++ +V L T+ EEL
Sbjct: 239 Y-IHLHKTAILLEASVVCGAIMGGGMAPDIERLRKYARYIGLLFQVVDDILDVTKSSEEL 297
Query: 283 KKLAFK 288
K A K
Sbjct: 298 GKTAGK 303
>gi|158104429|gb|ABD92926.2| geranylgeranyl diphosphate synthase [Stevia rebaudiana]
Length = 361
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 132/253 (52%), Gaps = 12/253 (4%)
Query: 36 MSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACEL 95
+ TP SY + L +V +K+P++++E MR+ + A + P +C+AACE+
Sbjct: 65 LETPFNFDSYMLEKVNMVNEALDASVPLKDPIKIHESMRYSLLAGGKRIRPMMCIAACEI 124
Query: 96 VGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAM 155
VGG+ A+ AA A+ ++H S +H++LP D + KP + + +L DA+
Sbjct: 125 VGGNILNAMPAACAVEMIHTMSLVHDDLPCMDNDDF-RRGKPISHKVYGEEMAVLTGDAL 183
Query: 156 LPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNG 215
L E +A++ G + RI+R + E+ R++GS+G+V GQ ++ D G
Sbjct: 184 LSLSFEHIATATK--GVSKDRIVRAIGELARSVGSEGLVAGQVVDILSEGAD------VG 235
Query: 216 ITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGP 275
+ +E + K L GAI+GGGS+++IE LR++ +G++ +V L
Sbjct: 236 LDHLEY---IHIHKTAMLLESSVVIGAIMGGGSDQQIEKLRKFARSIGLLFQVVDDILDV 292
Query: 276 TEEIEELKKLAFK 288
T+ EEL K A K
Sbjct: 293 TKSTEELGKTAGK 305
>gi|297825291|ref|XP_002880528.1| geranylgeranyl pyrophosphate synthase [Arabidopsis lyrata subsp.
lyrata]
gi|297326367|gb|EFH56787.1| geranylgeranyl pyrophosphate synthase [Arabidopsis lyrata subsp.
lyrata]
Length = 372
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 144/281 (51%), Gaps = 18/281 (6%)
Query: 45 YWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAI 104
Y S E + L +A+ V EP++++E MR+ + AA + P LC+A+CELVGG A+
Sbjct: 84 YMISKAESVNKALDEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQENAAM 143
Query: 105 VAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA 164
AA A+ ++H S I ++LP D L + KPT + + +L A+L E +
Sbjct: 144 PAACAVEMIHTMSLIKDDLPCMDNDDL-RRGKPTTHKVYGEGVAILSGGALLSLAFEHMT 202
Query: 165 SSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYE 224
+++ +S R++ + E+ R++G++G+V GQ ++ D ++ L + + +
Sbjct: 203 TAE----ISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHV--- 255
Query: 225 TYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
K L A GAI+GGGS++EIE +R++ +G++ +V L T+ EEL K
Sbjct: 256 ---HKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGK 312
Query: 285 LAFKLREVNSFN-------DENAEVIFSLVDDNITHVLGFN 318
A K + +++ E + L D H+ GF+
Sbjct: 313 TAGKDQLTGKLTYPKLMGLEKSKEFVKRLTKDARQHLQGFS 353
>gi|224077270|ref|XP_002305196.1| predicted protein [Populus trichocarpa]
gi|222848160|gb|EEE85707.1| predicted protein [Populus trichocarpa]
Length = 365
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 127/246 (51%), Gaps = 12/246 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K Y + + L +AV ++ P ++ E MR+ + A + P LC+A+CELVGG
Sbjct: 76 KEYMINKANQVNKALDEAVPLQHPQKINEAMRYSLLAGGKRVRPILCIASCELVGGDEGL 135
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ AA AL ++H S IH++LP D L + KPT + F +T +L DA+L E
Sbjct: 136 AMPAACALEMIHTMSLIHDDLPCMDNDDL-RRGKPTSHKIFGEDTAVLAGDALLSLAFEH 194
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+A N +S R+++ + E+ +GS+G+V GQ ++ D + K ++ +E
Sbjct: 195 VAR--NTKNVSSDRVVQAIAELGSTVGSKGLVAGQIVDI------DSEGKEVSLSTLEY- 245
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
+ K +L CGAI+GG +E LR+Y +G++ +V L T+ EEL
Sbjct: 246 --IHVHKTAKLLEAAVVCGAIMGGADATSVERLRKYARSIGLLFQVVDDILDVTKSSEEL 303
Query: 283 KKLAFK 288
K A K
Sbjct: 304 GKTAGK 309
>gi|15224064|ref|NP_179960.1| geranylgeranyl pyrophosphate synthase 4 [Arabidopsis thaliana]
gi|75218930|sp|O04046.2|GGPP2_ARATH RecName: Full=Heterodimeric geranylgeranyl pyrophosphate synthase
large subunit 2; Short=GGPP synthase 2; Short=GGPS2;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 2;
AltName: Full=Dimethylallyltranstransferase 2; AltName:
Full=Farnesyl diphosphate synthase 2; AltName:
Full=Farnesyltranstransferase 2; AltName:
Full=Geranyltranstransferase 2; Flags: Precursor
gi|3152604|gb|AAC17083.1| pregeranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|21593114|gb|AAM65063.1| pregeranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|26450970|dbj|BAC42592.1| putative pregeranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|28950937|gb|AAO63392.1| At2g23800 [Arabidopsis thaliana]
gi|206748358|gb|ACI22362.1| geranylgeranyl pyrophosphate synthase 2 [Arabidopsis thaliana]
gi|330252398|gb|AEC07492.1| geranylgeranyl pyrophosphate synthase 4 [Arabidopsis thaliana]
Length = 376
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 144/281 (51%), Gaps = 18/281 (6%)
Query: 45 YWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAI 104
Y S E + L +A+ V EP++++E MR+ + AA + P LC+A+CELVGG A+
Sbjct: 88 YMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQENAAM 147
Query: 105 VAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA 164
AA A+ ++H S I ++LP D L + KPT + + +L A+L E +
Sbjct: 148 PAACAVEMIHTMSLIKDDLPCMDNDDL-RRGKPTTHKVYGEGVAILSGGALLSLAFEHMT 206
Query: 165 SSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYE 224
+++ +S R++ + E+ R++G++G+V GQ ++ D ++ L + + +
Sbjct: 207 TAE----ISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHV--- 259
Query: 225 TYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
K L A GAI+GGGS++EIE +R++ +G++ +V L T+ EEL K
Sbjct: 260 ---HKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGK 316
Query: 285 LAFKLREVNSFN-------DENAEVIFSLVDDNITHVLGFN 318
A K + +++ E + L D H+ GF+
Sbjct: 317 TAGKDQLAGKLTYPKLIGLEKSKEFVKRLTKDARQHLQGFS 357
>gi|145352919|ref|XP_001420781.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581016|gb|ABO99074.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 312
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 131/261 (50%), Gaps = 9/261 (3%)
Query: 28 RPMMVTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPA 87
R + T +S+ + +Y +V+ +I L +V + P + E MR+ + A + PA
Sbjct: 5 RAVSATPDVSSEQEFNAYIKNVNAEIERALDASVPMHYPERLSESMRYSLLAGGKRIRPA 64
Query: 88 LCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNT 147
LC+AACELVGG E A+ A AL ++H S IH++LP D + KPT + +
Sbjct: 65 LCLAACELVGGTMEVAMPTACALEMIHTMSLIHDDLPSMDNDDF-RRGKPTNHKVYGEEM 123
Query: 148 ELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCD 207
+L DA+L E + G ++ ++LRV+V++ + +GS+G+V GQ ++ D
Sbjct: 124 AILAGDALLSHAFEYIGRETK--GVSADKVLRVIVDVGKCVGSEGLVGGQVVDIMSEGAD 181
Query: 208 DDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQG 267
+ G ++ + K G L GAILGG SE++I L RY +G+
Sbjct: 182 E------GTVTIDTLKYIHAHKTGALLEVSVTAGAILGGASEEQIGKLERYAQNIGLAFQ 235
Query: 268 IVSRRLGPTEEIEELKKLAFK 288
+V L T EEL K A K
Sbjct: 236 VVDDILDCTATSEELGKTAGK 256
>gi|1944371|dbj|BAA19583.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 373
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 144/281 (51%), Gaps = 18/281 (6%)
Query: 45 YWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAI 104
Y S E + L +A+ V EP++++E MR+ + AA + P LC+A+CELVGG A+
Sbjct: 85 YMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQENAAM 144
Query: 105 VAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA 164
AA A+ ++H S I ++LP D L + KPT + + +L A+L E +
Sbjct: 145 PAACAVEMIHTMSLIKDDLPCMDNDDL-RRGKPTTHKVYGEGVAILSGGALLSLAFEHMT 203
Query: 165 SSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYE 224
+++ +S R++ + E+ R++G++G+V GQ ++ D ++ L + + +
Sbjct: 204 TAE----ISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHV--- 256
Query: 225 TYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
K L A GAI+GGGS++EIE +R++ +G++ +V L T+ EEL K
Sbjct: 257 ---HKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGK 313
Query: 285 LAFKLREVNSFN-------DENAEVIFSLVDDNITHVLGFN 318
A K + +++ E + L D H+ GF+
Sbjct: 314 TAGKDQLAGKLTYPKLIGLEKSKEFVKRLTKDARQHLQGFS 354
>gi|358343453|ref|XP_003635816.1| hypothetical protein MTR_011s1001, partial [Medicago truncatula]
gi|355501751|gb|AES82954.1| hypothetical protein MTR_011s1001, partial [Medicago truncatula]
Length = 277
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 116/222 (52%), Gaps = 20/222 (9%)
Query: 59 QAVVVKEPVEVYEPMRHFVFAAPVNMAP-ALCVAACELVGGHREQAIVAAAALHVMHAAS 117
+A+ V+ P ++YE MR+ A +P +C++ACEL GG R A A AL ++HAAS
Sbjct: 2 EAIEVQFPQQIYEAMRYSALAKGAKRSPPVMCISACELFGGSRLAAFPTACALEMVHAAS 61
Query: 118 FIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRI 177
IH++LP D SL + +P+ + + + +L DA+ P G + + S R+
Sbjct: 62 LIHDDLPCMD-DSLSRRGQPSNHTIYGVDMAILAGDALFPLGFQHIVSHTPSDLVPEPRV 120
Query: 178 LRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACG 237
LRV+ E+ R +GS G+ GQ+ +L+ G V + + KK G + C
Sbjct: 121 LRVIAEIARCVGSTGMAAGQFLDLK-----------GGPNAVGLIQD---KKFGEMAECS 166
Query: 238 AACGAILGGGSEKEIELLRRYGFYVGMIQGIVS----RRLGP 275
A CG +L G + EIE LRRYG VG++ IV RL P
Sbjct: 167 AVCGGLLAGAEDDEIERLRRYGRAVGVLYAIVDDILEERLKP 208
>gi|87299435|dbj|BAE79550.1| geranylgeranyl pyrophosphate synthase [Chrysanthemum x morifolium]
Length = 345
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 132/246 (53%), Gaps = 12/246 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
KSY + L AV ++EP +++E MR+ + A + P LC+A+CELVGG +
Sbjct: 56 KSYMVQKANTVNQALDDAVPIREPKKIHESMRYSLLAGGKRVRPILCLASCELVGGDQIS 115
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ AA A+ ++H S +H++LP D + KPT + + +L DA+L F E
Sbjct: 116 AMPAACAVEMIHTMSLMHDDLPCMDNDDF-RRGKPTNHIVYGEEIAVLAGDALLSFAFEH 174
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+A++ ++ RI+R + E+ + +GS+G+V GQ ++ CS+ D G+ +E
Sbjct: 175 VATATKDV--SAERIVRAIGELAKCIGSEGLVAGQVVDI-CSEGAD-----VGLEHLEF- 225
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
+ K L GAI+GGGS+ E+E LR++ +G++ +V L T+ EEL
Sbjct: 226 --IHLHKTAALLEGSVVLGAIMGGGSDVEVERLRKFVRSIGLLFQVVDDILDVTKSSEEL 283
Query: 283 KKLAFK 288
K A K
Sbjct: 284 GKTAGK 289
>gi|297830700|ref|XP_002883232.1| hypothetical protein ARALYDRAFT_898426 [Arabidopsis lyrata subsp.
lyrata]
gi|297329072|gb|EFH59491.1| hypothetical protein ARALYDRAFT_898426 [Arabidopsis lyrata subsp.
lyrata]
Length = 356
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 148/281 (52%), Gaps = 16/281 (5%)
Query: 12 AHVAPRRNHSRPSLSYRPMMVTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPV-EVY 70
A ++ RR +R L+ + +T A S ++ SY + + L +AV + EPV ++
Sbjct: 32 AVMSSRRRQTR-HLNVQSHTLT-AESYESEFMSYMIRKSKSVNEVLDEAVPLCEPVLKIR 89
Query: 71 EPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTS 130
E MR+ + + + P LC+AACELVGG A+ A A+ ++HA+S I ++LP D +
Sbjct: 90 EAMRYTLLSGGKRVRPMLCLAACELVGGQESTAMPCACAVEMIHASSLIQDDLPCMDDDN 149
Query: 131 LIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASS---DNPAGNNSGRILRVMVEMTRA 187
L + KPT + F N +L DA++ ++ S D P R+L ++EM RA
Sbjct: 150 L-RRGKPTNHKVFGENIAILAVDALIALAIKHTVESTSLDVP----PERVLLAILEMARA 204
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
+G++G+V GQ +L D + + + T ++ + K L A GAI+GGG
Sbjct: 205 VGTEGLVAGQAADL-----DGEGKSFDNDTGLKHLEFIHIHKTAALLEAAAVMGAIMGGG 259
Query: 248 SEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
S++EIE +R Y +G++ +V L T+ EEL K A K
Sbjct: 260 SDEEIERIRSYARCIGLMFQVVDDVLDVTKSSEELGKTAGK 300
>gi|427724764|ref|YP_007072041.1| farnesyl-diphosphate synthase [Leptolyngbya sp. PCC 7376]
gi|427356484|gb|AFY39207.1| farnesyl-diphosphate synthase [Leptolyngbya sp. PCC 7376]
Length = 301
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 121/234 (51%), Gaps = 16/234 (6%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L Q++V EPV VYE MR+ + A + P LC+AAC ++GG E A+ A AL ++H
Sbjct: 27 LDQSIVTAEPVTVYEAMRYSLLAGGKRLRPILCLAACNMLGGTTEMAMNTACALEMIHTM 86
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGR 176
S IH++LP D L + KPT + + + +L D +L + E +A + G + R
Sbjct: 87 SLIHDDLPSMDNDDL-RRGKPTNHKVYGEDIAILAGDGLLSYAFEYVARTQ---GVPADR 142
Query: 177 ILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETY--KKKEGRLH 234
+L+V++ + +A+G++G+V GQ +LQ G TDV + + K G L
Sbjct: 143 LLQVVIRLGQAVGAEGLVGGQVVDLQS----------EGKTDVSIETLNFIHTHKTGALL 192
Query: 235 ACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GAIL G +I+ L++Y +G+ I+ L T EEL K A K
Sbjct: 193 EVCVTSGAILAGAENAKIQKLQKYAQNIGLTFQIIDDILDITATQEELGKTAGK 246
>gi|1229164|gb|AAB67730.1| pregeranygeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 378
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 142/281 (50%), Gaps = 18/281 (6%)
Query: 45 YWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAI 104
Y S E + L +A+ V EP++++E MR+ + AA + P LC+A+CELVGG I
Sbjct: 90 YMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQENATI 149
Query: 105 VAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA 164
AA A+ ++H S I ++LP D L + KPT + +L A+L E +
Sbjct: 150 PAACAVEMIHTMSLIKDDLPCMDNDDL-RRGKPTTDKVYGEGVAILSGGALLSLAFEHMT 208
Query: 165 SSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYE 224
+++ +S R++ + E+ R++G++G+V GQ ++ D ++ L + + +
Sbjct: 209 TAE----ISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHV--- 261
Query: 225 TYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
K L A GAI+GGGS++EIE +R++ +G++ +V L T+ EEL K
Sbjct: 262 ---HKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGK 318
Query: 285 LAFKLREVNSFN-------DENAEVIFSLVDDNITHVLGFN 318
A K + +++ E + L D H+ GF+
Sbjct: 319 TAGKDQLAGKLTYPKLIGLEKSKEFVKRLTKDARQHLQGFS 359
>gi|363814567|ref|NP_001242759.1| uncharacterized protein LOC100788186 [Glycine max]
gi|255635048|gb|ACU17882.1| unknown [Glycine max]
Length = 342
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 116/228 (50%), Gaps = 16/228 (7%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAP-ALCVAACELVGGHRE 101
K+Y ++ I L +A+ V+ P ++YE MR+ V A AP +C++ACEL GG R
Sbjct: 51 KTYCANLMVQINQKLDEAIPVQFPPQIYEAMRYSVLAKGAKRAPPVMCISACELFGGSRL 110
Query: 102 QAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE 161
A A AL ++HAAS IH++LP D S + +P+ + + + +L DA+ P G
Sbjct: 111 AAFPTACALEMVHAASLIHDDLPCMD-DSPSRRGQPSNHTIYGVDMAILAGDALFPLGFR 169
Query: 162 LLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEM 221
+ S +LRV+ E+ R++GS G+ GQ+ +L+ G V
Sbjct: 170 HIVSQTPSDLVPESHLLRVIAEIARSVGSTGMAAGQFLDLE-----------GGPNAVGF 218
Query: 222 TYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIV 269
E KK G + A CG L G + EIE LRRYG VG++ +V
Sbjct: 219 IQE---KKFGEMGESSAVCGGFLAGAEDDEIERLRRYGRAVGVLYAVV 263
>gi|116831222|gb|ABK28565.1| unknown [Arabidopsis thaliana]
Length = 345
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 145/274 (52%), Gaps = 13/274 (4%)
Query: 16 PRRNHSRPSLSYRPMMVTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEP-VEVYEPMR 74
PR N +L+ RP+ T A S K SY + + + L +AV ++EP +++ E MR
Sbjct: 27 PRYNDVTSALT-RPL--TSAASYDFKFMSYMVNKAKSVNKALEEAVPLREPELKIREAMR 83
Query: 75 HFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPK 134
+ + + + P LC+AACELVGG A+ AA A+ ++HA+S I ++LP D SL +
Sbjct: 84 YTLLSDGKRVRPMLCLAACELVGGQESTAMSAACAIEMLHASSLILDDLPCMDNDSL-RR 142
Query: 135 SKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVV 194
KPT + F + +L + A++ ++ SS A RIL+ + EM +A+ +G+V
Sbjct: 143 GKPTNHIVFGESIAILASQALIALAVQKTTSS-TFADVPPERILKTVQEMVKAV--EGLV 199
Query: 195 EGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIEL 254
GQ +L + + + T +E + K L A GAI+GGGS++EIE
Sbjct: 200 AGQQADLA-----GEGMRFDSDTGLEHLEFIHIHKTAALLEAAAVMGAIMGGGSDEEIER 254
Query: 255 LRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
LR Y +G++ +V L T+ EEL K A K
Sbjct: 255 LRSYARCIGLMFQVVDDVLDVTKSSEELGKTAGK 288
>gi|15231055|ref|NP_188651.1| geranylgeranyl diphosphate synthase 10 [Arabidopsis thaliana]
gi|75273683|sp|Q9LJY2.1|GGPPA_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 10,
mitochondrial; Short=GGPP synthase 10; Short=GGPS10;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 10;
AltName: Full=Dimethylallyltranstransferase 10; AltName:
Full=Farnesyl diphosphate synthase 10; AltName:
Full=Farnesyltranstransferase 10; AltName:
Full=Geranyltranstransferase 10; Flags: Precursor
gi|9293973|dbj|BAB01876.1| geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|91806447|gb|ABE65951.1| geranylgeranyl pyrophosphate synthase/GGPP
synthetase/farnesyltranstransferase [Arabidopsis
thaliana]
gi|332642821|gb|AEE76342.1| geranylgeranyl diphosphate synthase 10 [Arabidopsis thaliana]
Length = 344
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 145/274 (52%), Gaps = 13/274 (4%)
Query: 16 PRRNHSRPSLSYRPMMVTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEP-VEVYEPMR 74
PR N +L+ RP+ T A S K SY + + + L +AV ++EP +++ E MR
Sbjct: 27 PRYNDVTSALT-RPL--TSAASYDFKFMSYMVNKAKSVNKALEEAVPLREPELKIREAMR 83
Query: 75 HFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPK 134
+ + + + P LC+AACELVGG A+ AA A+ ++HA+S I ++LP D SL +
Sbjct: 84 YTLLSDGKRVRPMLCLAACELVGGQESTAMSAACAIEMLHASSLILDDLPCMDNDSL-RR 142
Query: 135 SKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVV 194
KPT + F + +L + A++ ++ SS A RIL+ + EM +A+ +G+V
Sbjct: 143 GKPTNHIVFGESIAILASQALIALAVQKTTSS-TFADVPPERILKTVQEMVKAV--EGLV 199
Query: 195 EGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIEL 254
GQ +L + + + T +E + K L A GAI+GGGS++EIE
Sbjct: 200 AGQQADLA-----GEGMRFDSDTGLEHLEFIHIHKTAALLEAAAVMGAIMGGGSDEEIER 254
Query: 255 LRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
LR Y +G++ +V L T+ EEL K A K
Sbjct: 255 LRSYARCIGLMFQVVDDVLDVTKSSEELGKTAGK 288
>gi|409993924|ref|ZP_11277049.1| farnesyl-diphosphate synthase [Arthrospira platensis str. Paraca]
gi|291568862|dbj|BAI91134.1| geranylgeranyl pyrophosphate synthase [Arthrospira platensis
NIES-39]
gi|409935211|gb|EKN76750.1| farnesyl-diphosphate synthase [Arthrospira platensis str. Paraca]
Length = 316
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 126/251 (50%), Gaps = 11/251 (4%)
Query: 38 TPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVG 97
TP +Y + E + A L A+ V P ++YE MR+ + A + P LC+A CEL+G
Sbjct: 22 TPFDLSTYLSQKKELVEAALDAAITVTYPEKIYESMRYSLMAGGKRLRPTLCLATCELLG 81
Query: 98 GHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLP 157
G E A+ A AL ++H S IH++LP D + K T + + + +L D +L
Sbjct: 82 GTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDY-RRGKLTNHKVYGDDIAILAGDGLLS 140
Query: 158 FGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGIT 217
+ E +A+ G R+L+V+ + RA+G+ G+V GQ ++ L+ ++
Sbjct: 141 YAFEFVATQTQ--GVPPERVLQVIGRLGRAVGATGLVGGQVVDIAS-------EGLSDVS 191
Query: 218 DVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTE 277
+ +T+ K L AC CGAIL G +E ++E L RY +G+ IV L T
Sbjct: 192 EETLTFIHTHKTGALLEAC-VVCGAILAGANETDLERLSRYAKNIGLAFQIVDDILDITA 250
Query: 278 EIEELKKLAFK 288
E+L K A K
Sbjct: 251 PSEQLGKTAGK 261
>gi|3885426|gb|AAC77874.1| geranylgeranyl pyrophosphate synthase [Helianthus annuus]
Length = 356
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 124/232 (53%), Gaps = 11/232 (4%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L +++++K P ++E MR+ + A + P LC+AACELVGG A+ AA A+ ++H
Sbjct: 79 LDESIMIKNPPTIHEAMRYSLLAGGKRVRPILCIAACELVGGEEATAMPAACAVEMIHTM 138
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGR 176
S IH++LP D + KPT + + + +L D++L F E ++S G + R
Sbjct: 139 SLIHDDLPCMDNDDF-RRGKPTNHKVYGEDVAVLAGDSLLAFAFEYVSSRTE--GASPAR 195
Query: 177 ILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHAC 236
+L + E+ +++G++G+V GQ ++ + D G+ +E + K L
Sbjct: 196 VLAAIGELAKSIGTEGLVAGQVVDIASTGGQD-----IGLDQLEF---IHIHKTAALLEA 247
Query: 237 GAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GAILGGGS+ ++E LR + +G++ +V L T+ EEL K A K
Sbjct: 248 SVVLGAILGGGSDAQVEKLRTFARCIGLLFQVVDDILDVTKSSEELGKTAGK 299
>gi|125583193|gb|EAZ24124.1| hypothetical protein OsJ_07863 [Oryza sativa Japonica Group]
Length = 342
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 158/355 (44%), Gaps = 56/355 (15%)
Query: 1 MAKALSVLNLPAHVAPRRNHSRPSLSYRPMMVTMAMSTPNKNKSYWTSVHEDIGAHLRQA 60
MA + ++LP P + S L R A S + YWTS+ D+ A L A
Sbjct: 1 MALSSFSMSLPFAKLPSTSKSTRFLPIRASSAAAAASPSFDLRLYWTSLIADVEAELDAA 60
Query: 61 VVVKEPVEVYEPMRHFVFAAPVN------MAPALCVAACELVGGHREQAIVAAAALHVMH 114
+ ++ P ++ MR+ V N P LCVAACEL+G RE + AA AL ++
Sbjct: 61 MPIRTPERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAACELLGAPREAPVPAALALQMVQ 120
Query: 115 AASFIHENLPLSDRTSLIPKSK--PTMYHAFKPNTELLVADAMLPFGLE-LLASSDNPAG 171
A ++E+LP + PK + P+ A+ + +L DA+ P ++A + +P
Sbjct: 121 AGWLVNEDLPWFEAG---PKRRGGPSNQAAYGTDMAVLAGDALFPLAYTHVIAQNPSPEP 177
Query: 172 NNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEG 231
+LRV+ E+ RA+GS G+ GQ+ +L + + + +T KK G
Sbjct: 178 VPHAVLLRVLGELARAVGSTGMAAGQFLDLAGATALGEAEVMKVLT----------KKFG 227
Query: 232 RLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIV---------------------- 269
+ C AACGA+LGG E LRRYG +G++ +V
Sbjct: 228 EMAECSAACGAMLGGAGPDEEAALRRYGRTIGVLYQLVDDIRSASGNGKMRSNASVLRAL 287
Query: 270 --SRRLGPTEEIEELKKLAFKLREVNSFNDENAEVI---FSLVDDNITHVLGFNL 319
R LG EE++ K+ E + F D+ E + +S VD + GF L
Sbjct: 288 GMDRALGIVEELKAQAKM-----EADRFGDKYGERVLPLYSFVDYAVER--GFEL 335
>gi|209526715|ref|ZP_03275238.1| Polyprenyl synthetase [Arthrospira maxima CS-328]
gi|376002372|ref|ZP_09780207.1| geranyltranstransferase [Arthrospira sp. PCC 8005]
gi|423067929|ref|ZP_17056719.1| geranylgeranyl diphosphate synthase [Arthrospira platensis C1]
gi|209492847|gb|EDZ93179.1| Polyprenyl synthetase [Arthrospira maxima CS-328]
gi|375329252|emb|CCE15960.1| geranyltranstransferase [Arthrospira sp. PCC 8005]
gi|406710557|gb|EKD05765.1| geranylgeranyl diphosphate synthase [Arthrospira platensis C1]
Length = 316
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 130/264 (49%), Gaps = 16/264 (6%)
Query: 30 MMVTMAMSTPNKNK-----SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNM 84
M+VT M ++ +Y + E + A L A+ V P ++YE MR+ + A +
Sbjct: 9 MVVTENMDLSGSDRPFDLSTYLSQKKELVEAALDAAIAVTYPEKIYESMRYSLMAGGKRL 68
Query: 85 APALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFK 144
P LC+A CEL+GG E A+ A AL ++H S IH++LP D + K T + +
Sbjct: 69 RPILCLATCELLGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDY-RRGKLTNHKVYG 127
Query: 145 PNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCS 204
+ +L D +L + E +A+ G R+L+V+ + RA+G+ G+V GQ +L
Sbjct: 128 EDIAILAGDGLLSYAFEFVATQTQ--GVPPERVLQVIGRLGRAVGATGLVGGQVVDLA-- 183
Query: 205 QCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
L+ I++ +T+ K L AC CGAIL G +E ++E L RY +G+
Sbjct: 184 -----SEGLSDISEETLTFIHTHKTGALLEAC-VVCGAILAGANETDLERLSRYAKNIGL 237
Query: 265 IQGIVSRRLGPTEEIEELKKLAFK 288
IV L T EL K A K
Sbjct: 238 AFQIVDDILDITVPSSELGKTAGK 261
>gi|313118274|sp|Q9LRR0.2|GGPP8_ARATH RecName: Full=Putative geranylgeranyl pyrophosphate synthase 8,
chloroplastic; Short=GGPP synthase 8; Short=GGPS8;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 8;
AltName: Full=Dimethylallyltranstransferase 8; AltName:
Full=Farnesyl diphosphate synthase 8; AltName:
Full=Farnesyltranstransferase 8; AltName:
Full=Geranyltranstransferase 8; Flags: Precursor
Length = 361
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/249 (34%), Positives = 134/249 (53%), Gaps = 13/249 (5%)
Query: 43 KSYWTSVHEDIGAHLRQAVV-VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHRE 101
K Y E + A L ++V ++EP+ V E +R+ + A + P LC+A CELVGG
Sbjct: 67 KLYMIRKAESVNAALDVSIVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEA 126
Query: 102 QAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE 161
A+ AA A+ ++H +S IH++LP D L + KPT + F + +L DA+L E
Sbjct: 127 TAMSAACAVEMIHTSSLIHDDLPCMDNADL-RRGKPTNHKVFGEDMAVLAGDALLALAFE 185
Query: 162 --LLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDV 219
+ SS A S R++R +VE+ RA+G++G+V GQ +L + + D L + +
Sbjct: 186 HMTVVSSGLVA---SERMIRAVVELARAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFI 242
Query: 220 EMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEI 279
+ K L A GAI+GGG+E+EIE LR+Y +G++ +V L T+
Sbjct: 243 HL------HKTAALLEAAAVIGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKST 296
Query: 280 EELKKLAFK 288
EEL K A K
Sbjct: 297 EELGKTAGK 305
>gi|168042697|ref|XP_001773824.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674939|gb|EDQ61441.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 332
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 132/245 (53%), Gaps = 11/245 (4%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
SY + + + L +AV ++ P ++ E MR+ + A + PALC+AACELVGG+ + A
Sbjct: 43 SYLRAKAKAVNVALDKAVPMQYPEKIREAMRYSLLAGGKRVRPALCIAACELVGGNEDLA 102
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ +A A+ ++H S IH++LP D L + KPT + AF +T +L DA+L + E +
Sbjct: 103 MPSACAMEMVHTMSLIHDDLPCMDDDDL-RRGKPTNHKAFGEDTAVLAGDALLAYAFEHI 161
Query: 164 ASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTY 223
A + G + R+LRV+ + +A+GS+G+V GQ ++ + DR + +E+
Sbjct: 162 ARATT--GVPADRVLRVIAHLGKAVGSEGLVAGQIVDI----ASEGDRTVG----LEILE 211
Query: 224 ETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELK 283
+ K L GAILGG SE EI L Y VG++ +V L T+ EL
Sbjct: 212 YVHTHKTAVLLESAVVSGAILGGASEDEISRLSNYARNVGLLFQVVDDILDVTKSSAELG 271
Query: 284 KLAFK 288
K A K
Sbjct: 272 KTAGK 276
>gi|255568243|ref|XP_002525096.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223535555|gb|EEF37223.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
Length = 369
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 138/251 (54%), Gaps = 21/251 (8%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
KSY I L AV ++EP +++E MR+ + A + PALC+AACELVGG+
Sbjct: 79 KSYMLQKAASINQALDAAVPIREPTKIHESMRYSLLAGGKRVRPALCLAACELVGGNESM 138
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ AA A+ ++H S IH++LP D L + KPT + F + +L DA+L E
Sbjct: 139 AMPAACAVEMIHTMSLIHDDLPCMDNDDL-RRGKPTNHIVFGEDVAVLAGDALLALAFEH 197
Query: 163 LASSD---NPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDV 219
+A + +PA RI+R + E+ +A+G++G+V GQ ++ CS+ G+++V
Sbjct: 198 IAIATLNVSPA-----RIVRAVGELAKAIGAEGLVAGQVVDI-CSE---------GLSEV 242
Query: 220 --EMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTE 277
E + K +L GAI+GGG+++E+E LR+Y +G++ +V L T+
Sbjct: 243 GLEKLEFIHVHKTAKLLEGAVVLGAIMGGGTDEEVEKLRKYARDIGLLFQVVDDILDVTK 302
Query: 278 EIEELKKLAFK 288
+EL K A K
Sbjct: 303 SSQELGKTAGK 313
>gi|56750769|ref|YP_171470.1| geranylgeranyl pyrophosphate synthase [Synechococcus elongatus PCC
6301]
gi|81299587|ref|YP_399795.1| farnesyl-diphosphate synthase [Synechococcus elongatus PCC 7942]
gi|56685728|dbj|BAD78950.1| geranylgeranyl pyrophosphate synthase [Synechococcus elongatus PCC
6301]
gi|81168468|gb|ABB56808.1| farnesyl-diphosphate synthase [Synechococcus elongatus PCC 7942]
Length = 301
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
KSY + A L + ++P +YE MR+ + A + P LC+A+CEL GG
Sbjct: 12 KSYLKERQRQVEAALNAILPPQDPPLIYESMRYSLLAEGKRLRPILCLASCELAGGTAAI 71
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ A AL ++H S IH++LP D + +PT + + + +L DA+L + E
Sbjct: 72 ALPTACALEMVHTMSLIHDDLPSMDNDDF-RRGRPTNHKVYGEDIAILAGDALLTYAFEA 130
Query: 163 LA--SSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVE 220
+A + + PA R+L+V+ + RA+G++G+V GQ +LQ DD ++E
Sbjct: 131 IARHTPEVPA----DRVLKVIAALARAVGAEGLVGGQVVDLQSEGRDD--------VNLE 178
Query: 221 MTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
+ + K G L GAIL G SE+ E LR Y +G+ ++ L T E
Sbjct: 179 TLHYIHTHKTGALLEVSVVSGAILAGASEELQEQLRTYAQKIGLAFQVIDDILDITATAE 238
Query: 281 ELKKLAFK 288
EL K A K
Sbjct: 239 ELGKTAGK 246
>gi|413923398|gb|AFW63330.1| hypothetical protein ZEAMMB73_683286 [Zea mays]
Length = 342
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 166/350 (47%), Gaps = 46/350 (13%)
Query: 1 MAKALSVLNLPAHVAPRRNHSRPSLSYRPMMVTMAMSTPNKNKSYWTSVHEDIGAHLRQA 60
MA + + LP P N+SR L+ R A S + YWTS+ D+ + L A
Sbjct: 1 MALSSLFIILPVPKVPYSNYSRRLLTARASSDAPAASASFDLRRYWTSLIADVESELDAA 60
Query: 61 VVVKEPVEVYEPMRHFVF------AAPVNMAPALCVAACELVGGHREQAIVAAAALHVMH 114
+ ++ P ++ MR+ V A P LCVAACEL+G R A+ AAAAL ++H
Sbjct: 61 MPMQPPESIHSAMRYAVLPGAGKEGAAKRAPPVLCVAACELLGAPRAAALPAAAALEMLH 120
Query: 115 AASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGL-ELLASSDNPAGNN 173
AAS +H++LP D + + +P+ + A+ + +L DA+ P +++ + P
Sbjct: 121 AASLVHDDLPCFD-AAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTHVISHTPCPDPVP 179
Query: 174 SGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRL 233
++RV+ E+ RA+GS G+ GQ+ +L + + + E+ + KK G +
Sbjct: 180 HAVLMRVLAELARAVGSTGMAAGQFLDLAGA---------TALGEAEVM-QVLTKKFGEM 229
Query: 234 HACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVS------------------RRLGP 275
C AACGA+LGG E LRRYG +G++ +V R LG
Sbjct: 230 AECSAACGAMLGGARPDEEAALRRYGRTIGVLYELVDDIRSASGNGKMRSNASVLRSLGM 289
Query: 276 TEE---IEELKKLAFKLREVNSFNDENAEVI---FSLVDDNITHVLGFNL 319
+EELK A E + F+D+ + + +S VD + GF L
Sbjct: 290 DRALGIVEELKAQAKT--EADRFSDKYGDRVLPLYSFVDYAVER--GFEL 335
>gi|308809942|ref|XP_003082280.1| geranylgeranyl diphosphate synthase (ISS) [Ostreococcus tauri]
gi|116060748|emb|CAL57226.1| geranylgeranyl diphosphate synthase (ISS) [Ostreococcus tauri]
Length = 345
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 129/272 (47%), Gaps = 9/272 (3%)
Query: 17 RRNHSRPSLSYRPMMVTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHF 76
RR + S + + + + +Y V+ I L +V V P + E MR+
Sbjct: 27 RRARTEASAPATSGASSTSADSEREFNAYIKGVNAKIERALDASVPVHYPERLSESMRYS 86
Query: 77 VFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSK 136
+ A + PALC+AACELVGG E A+ A AL ++H S IH++LP D + K
Sbjct: 87 LLAGGKRIRPALCLAACELVGGDMETAMPTACALEMIHTMSLIHDDLPSMDNDDF-RRGK 145
Query: 137 PTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEG 196
PT + + +L DA+L E + G ++ ++LRV+V++ + +GS+G+V G
Sbjct: 146 PTNHKVYGEEMAILAGDALLSHAFEYIGRETK--GASAEKVLRVIVDVGKCVGSEGLVGG 203
Query: 197 QYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLR 256
Q ++ ++ V+ + K G L GAILGG SE++I L
Sbjct: 204 QVVDIMSEGAGPEN------VTVDTLKYIHAHKTGALLEVSVTAGAILGGASEEQIGKLE 257
Query: 257 RYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
RY +G+ +V L T EEL K A K
Sbjct: 258 RYAQNIGLAFQVVDDILDCTASSEELGKTAGK 289
>gi|359477279|ref|XP_002275812.2| PREDICTED: geranylgeranyl pyrophosphate synthase 1,
chloroplastic-like [Vitis vinifera]
Length = 380
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 149/298 (50%), Gaps = 25/298 (8%)
Query: 7 VLNLPAHVAPR--RNHSRPSL--SYRPMMVTMAMS------TPNKN------KSYWTSVH 50
V N+P H R RN S P L + RP + + + S TP K K+Y
Sbjct: 36 VSNIPHHSVVRLPRNLSIPLLWPTRRPSVTSFSYSYVSAGDTPQKERPDFNFKAYMLEKA 95
Query: 51 EDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAAL 110
+ + L A+ ++EP+E+++ MR+ + + P +C++ACELVGG A+ A+
Sbjct: 96 KSVNQALDTAIPLREPLEIHKAMRYSLLDGGKRIHPIVCISACELVGGQESTAMPVVCAV 155
Query: 111 HVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPA 170
++H S + ++LP D I + KP+ + AF + +L DA+L E +A+
Sbjct: 156 EMLHVVSLMQDDLPCMDNDD-IRRGKPSNHKAFGESVTILAVDALLALAFEHVATMSTVG 214
Query: 171 GNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKE 230
+ + E+ R++GSQG+V GQ+ L S + L G+ + + K
Sbjct: 215 VVPPMVTVHAIQELARSIGSQGLVAGQF--LDLSSEGSPEIGLEGLESIHIN------KA 266
Query: 231 GRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
G L A GA+LGGGS +++E+LR++G VG++ +V L T+ +EL K A K
Sbjct: 267 GPLLEASAVIGAMLGGGSSEQMEILRKFGRCVGLLYQVVDDILDITKSTQELGKTAGK 324
>gi|428311367|ref|YP_007122344.1| geranylgeranyl pyrophosphate synthase [Microcoleus sp. PCC 7113]
gi|428252979|gb|AFZ18938.1| geranylgeranyl pyrophosphate synthase [Microcoleus sp. PCC 7113]
Length = 309
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 124/247 (50%), Gaps = 15/247 (6%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
+Y + A L +++ + P ++YE MR+ + A + P LC+A CELVGG E A
Sbjct: 21 TYLKQRQAQVEAALDRSLPLTYPEKIYEAMRYSLLAGGKRLRPILCLATCELVGGTLEMA 80
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ A AL ++H S IH++LP D + K T + + + +L D +L + E +
Sbjct: 81 MPTACALEMIHTMSLIHDDLPAMDNDDY-RRGKLTNHKVYGDDIAILAGDGLLAYAFEYV 139
Query: 164 ASSDN--PAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEM 221
A+ PA ++L+V+ + RA+G+ G+V GQ +L+ D I + +
Sbjct: 140 ATQTQNVPA----HQVLQVVARLGRAVGAAGLVGGQVVDLESEGNSD-------IQEETL 188
Query: 222 TYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEE 281
T+ K L AC CG ILGG +++EIE L RY +G+ IV L T EE
Sbjct: 189 TFIHTHKTGALLEAC-VVCGGILGGVTDEEIERLSRYAKNIGLAFQIVDDILDITATQEE 247
Query: 282 LKKLAFK 288
L K A K
Sbjct: 248 LGKTAGK 254
>gi|15231869|ref|NP_188069.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
gi|332642012|gb|AEE75533.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
Length = 284
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 128/232 (55%), Gaps = 12/232 (5%)
Query: 59 QAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASF 118
++V ++EP+ V E +R+ + A + P LC+A CELVGG A+ AA A+ ++H +S
Sbjct: 7 RSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSL 66
Query: 119 IHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE--LLASSDNPAGNNSGR 176
IH++LP D L + KPT + F + +L DA+L E + SS A S R
Sbjct: 67 IHDDLPCMDNADL-RRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVA---SER 122
Query: 177 ILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHAC 236
++R +VE+ RA+G++G+V GQ +L + + D L + + + K L
Sbjct: 123 MIRAVVELARAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHL------HKTAALLEA 176
Query: 237 GAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
A GAI+GGG+E+EIE LR+Y +G++ +V L T+ EEL K A K
Sbjct: 177 AAVIGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGK 228
>gi|326505838|dbj|BAJ91158.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326514464|dbj|BAJ96219.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 342
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 137/262 (52%), Gaps = 19/262 (7%)
Query: 16 PRRNHSRPSLSYRPMMVTMAMSTPNKN-KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMR 74
P+ + S + P+ + A + P+ + + YWTS+ ++ L A+ ++ P ++ MR
Sbjct: 15 PKLPSTSKSSRFLPIRASAAAAAPSFDLRRYWTSLISEVEGELDAAMPIRPPESIHNAMR 74
Query: 75 HFVF------AAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
H V A P LCVAACEL+G R A+ AAAL ++H AS +H++LP D
Sbjct: 75 HAVLPGAGKEGAAKRAPPVLCVAACELLGAPRAAALPTAAALEMLHGASLVHDDLPCFD- 133
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGL-ELLASSDNPAGNNSGRILRVMVEMTRA 187
+ + +P+ + A+ + +L DA+ P +++ + +P + +LRV+ E+ R
Sbjct: 134 AAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTHVISRTPSPDPVSHAVLLRVLAELART 193
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
+GS G+ GQ+ +L + + + + E+ + KK G + C AACGA+LGG
Sbjct: 194 VGSTGMAAGQFLDLAGA---------SALGEAEVM-QVLTKKFGEMAECSAACGAMLGGA 243
Query: 248 SEKEIELLRRYGFYVGMIQGIV 269
E LRRYG +G++ +V
Sbjct: 244 GPDEEAALRRYGRAIGVLYELV 265
>gi|303271183|ref|XP_003054953.1| geranyl pyrophosphate synthase [Micromonas pusilla CCMP1545]
gi|226462927|gb|EEH60205.1| geranyl pyrophosphate synthase [Micromonas pusilla CCMP1545]
Length = 343
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 122/249 (48%), Gaps = 16/249 (6%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
+Y ++ I L +V P ++E MR+ + A + P LC+AACEL+GG E A
Sbjct: 51 NYIADKNKAIEQALSDSVPEMYPERLHESMRYSLLAGGKRIRPCLCIAACELMGGTMEVA 110
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ A AL ++H S IH++LP D + KPT + + +L DA+L E +
Sbjct: 111 MPTACALEMIHTMSLIHDDLPSMDNDDF-RRGKPTNHKVYGEEMAILAGDALLSHAFEYI 169
Query: 164 ASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTY 223
+ P + R LRV+V++ + +GS+G+V GQ ++ D D E+T
Sbjct: 170 G-RETPKSVPAERTLRVLVDVGKCVGSEGLVGGQVVDIMSEGADAD----------EVTL 218
Query: 224 ETYK----KKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEI 279
ET K K G L GAIL G E+++E L +Y +G+ +V L T+
Sbjct: 219 ETLKYIHAHKTGALLEVSVTSGAILAGAKEEDVERLGKYAQLIGLAFQVVDDILDCTQTS 278
Query: 280 EELKKLAFK 288
E+L K A K
Sbjct: 279 EQLGKTAGK 287
>gi|297834334|ref|XP_002885049.1| hypothetical protein ARALYDRAFT_478873 [Arabidopsis lyrata subsp.
lyrata]
gi|297330889|gb|EFH61308.1| hypothetical protein ARALYDRAFT_478873 [Arabidopsis lyrata subsp.
lyrata]
Length = 360
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 134/249 (53%), Gaps = 14/249 (5%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
KSY + + + A L +V ++EP+ V E +R+ + A + P LC+A+CELVGG+
Sbjct: 67 KSYMINKAKSVNAALDISVPLREPLTVQEAVRYSLLAGGKRVRPMLCIASCELVGGNEAT 126
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE- 161
A+ AA A+ ++H +S IH++LP D L + KPT + F + +L DA+L E
Sbjct: 127 AMPAACAVEMIHTSSLIHDDLPCMDNADL-RRGKPTNHKVFGEDMAVLAGDALLALAFEH 185
Query: 162 --LLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDV 219
+++S P R++R + E+ RA+G+ G+V GQ +L + + D L + +
Sbjct: 186 MTVVSSGLVPP----ERMIRAVAELARAIGTTGLVAGQMIDLASERLNPHDAGLERLEFI 241
Query: 220 EMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEI 279
+ K L A G I+GGG+E+EIE LR+Y +G++ +V L TE
Sbjct: 242 HL------HKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTEST 295
Query: 280 EELKKLAFK 288
EEL K A K
Sbjct: 296 EELGKTAGK 304
>gi|357136943|ref|XP_003570062.1| PREDICTED: geranylgeranyl pyrophosphate synthase-related protein,
chloroplastic-like [Brachypodium distachyon]
Length = 346
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 146/308 (47%), Gaps = 46/308 (14%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVF------AAPVNMAPALCVAACELV 96
+ YWTS+ ++ L A+ ++ P ++ MRH V A P LCVAACEL+
Sbjct: 47 RRYWTSLIAEVEGELDAAMPIRPPESIHSAMRHAVLPGAGKEGAAKRAPPVLCVAACELL 106
Query: 97 GGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAML 156
G R A+ AAAL ++HAAS +H++LP D + + +P+ + A+ + +L DA+
Sbjct: 107 GAPRAAALPTAAALEMLHAASLVHDDLPCFD-AAPTRRGRPSTHAAYGTDMAVLAGDALF 165
Query: 157 PFGL-ELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNG 215
P +++ + +P + +LRV+ E+ R +GS G+ GQ+ +L + + +
Sbjct: 166 PLAYTHVISRTPSPNPVSHAVLLRVLAELARTVGSTGMAAGQFLDLAGATALGEREVMQV 225
Query: 216 ITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVS----- 270
+T KK G + C AACGA+L G E LRRYG +G++ +V
Sbjct: 226 LT----------KKFGEMAECSAACGAMLAGAGPDEEASLRRYGRTIGVLYELVDDIRSA 275
Query: 271 -------------RRLGPTEE---IEELKKLAFKLREVNSFNDENAEVI---FSLVDDNI 311
R LG +EELK A E + F D+ E + +S VD +
Sbjct: 276 SGNGKMRSNASVLRSLGMDRALGIVEELKAQAKA--EADRFADKYGERVLPLYSFVDYAV 333
Query: 312 THVLGFNL 319
GF L
Sbjct: 334 ER--GFEL 339
>gi|443314084|ref|ZP_21043676.1| geranylgeranyl pyrophosphate synthase [Leptolyngbya sp. PCC 6406]
gi|442786319|gb|ELR96067.1| geranylgeranyl pyrophosphate synthase [Leptolyngbya sp. PCC 6406]
Length = 306
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 125/252 (49%), Gaps = 23/252 (9%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K+Y + + + A L ++ + P +YE MR+ + A + P LC+AACEL+GG Q
Sbjct: 17 KTYLSDRQKRVEAALDASLPLAYPETIYEAMRYSLLAGGKRLRPILCLAACELMGGTTAQ 76
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ A AL ++H S IH++LP D + + T + + + +L DA+L + E
Sbjct: 77 AMPTACALEMVHTMSLIHDDLPAMDNDDY-RRGQLTNHKVYGEDVAILAGDALLTYAFEH 135
Query: 163 LA--SSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVE 220
+A ++D PA R+LRV+ ++ RA+G++G+V GQ +L D+E
Sbjct: 136 IARYTTDVPA----DRVLRVIADLGRAVGAEGLVGGQIVDLASEG------------DLE 179
Query: 221 MTYET----YKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPT 276
+T +T + K G L GAIL G E I L Y +G+ IV L T
Sbjct: 180 VTVDTLNYIHVHKTGALLELSVTSGAILAGAGETAIATLSGYAQRIGLAFQIVDDVLDIT 239
Query: 277 EEIEELKKLAFK 288
EEL K A K
Sbjct: 240 ATSEELGKSAGK 251
>gi|428777168|ref|YP_007168955.1| farnesyl-diphosphate synthase [Halothece sp. PCC 7418]
gi|428691447|gb|AFZ44741.1| farnesyl-diphosphate synthase [Halothece sp. PCC 7418]
Length = 307
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 122/250 (48%), Gaps = 11/250 (4%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
SY + + L Q++ V EP ++YE MR+ + A + P LC+A CELVGG E A
Sbjct: 19 SYLQARKAIVEKALDQSLRVGEPPQIYEAMRYSLLAGGKRLRPILCLATCELVGGSIEMA 78
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ A AL ++H S IH++LP D + K T + F + +L D +L + E +
Sbjct: 79 MPTACALEMIHTMSLIHDDLPAMDNDDY-RRGKLTNHKKFGEDIAILAGDGLLAYAFEYI 137
Query: 164 ASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTY 223
A+ G +L+V+ ++ A+G+ G+V GQ +L D ++E
Sbjct: 138 ATYTQ--GVEPAAVLKVVSKLGHAVGATGLVGGQVVDLASEGNPD--------INLETLN 187
Query: 224 ETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELK 283
+ K G L GAILGG +E+++ L RY + +G+ IV L T EEL
Sbjct: 188 YIHTHKTGALLEACVVSGAILGGATEEDLGRLSRYAYDIGLAFQIVDDILDITATQEELG 247
Query: 284 KLAFKLREVN 293
K A K E +
Sbjct: 248 KTAGKDLEAD 257
>gi|11994221|dbj|BAB01343.1| geranyl geranyl pyrophosphate synthase-like protein [Arabidopsis
thaliana]
Length = 306
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 123/226 (54%), Gaps = 12/226 (5%)
Query: 65 EPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLP 124
EP+ V E +R+ + A + P LC+A CELVGG A+ AA A+ ++H +S IH++LP
Sbjct: 35 EPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLP 94
Query: 125 LSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE--LLASSDNPAGNNSGRILRVMV 182
D L + KPT + F + +L DA+L E + SS A S R++R +V
Sbjct: 95 CMDNADL-RRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVA---SERMIRAVV 150
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
E+ RA+G++G+V GQ +L + + D L + + + K L A GA
Sbjct: 151 ELARAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHL------HKTAALLEAAAVIGA 204
Query: 243 ILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
I+GGG+E+EIE LR+Y +G++ +V L T+ EEL K A K
Sbjct: 205 IMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGK 250
>gi|428305626|ref|YP_007142451.1| polyprenyl synthetase [Crinalium epipsammum PCC 9333]
gi|428247161|gb|AFZ12941.1| Polyprenyl synthetase [Crinalium epipsammum PCC 9333]
Length = 312
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 120/245 (48%), Gaps = 11/245 (4%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
SY + + A L ++ V P ++YE MR+ + A + P LC+A CE++GG A
Sbjct: 24 SYLAQIQPQVEAALDNSLPVVYPEKIYEAMRYSLLAGGKRLRPILCLATCEMLGGTTAMA 83
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ A AL ++H S IH++LP D + K T + + + +L D +L + E +
Sbjct: 84 MPTACALEMVHTMSLIHDDLPAMDNDDY-RRGKLTNHKVYGEDIAILAGDGLLAYSFEYI 142
Query: 164 ASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTY 223
A + G + ++L+V+ +++ A+G+ G+V GQ +L+C D T VE
Sbjct: 143 AKATQ--GVPAEQVLQVIAQLSHAVGATGLVGGQVVDLECEGKSD--------TSVETLT 192
Query: 224 ETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELK 283
+ K G L CGAIL S + ++ L RY +G+ IV L T EEL
Sbjct: 193 YIHTHKTGALLESCVVCGAILASASAEVLQKLSRYAQNIGLAFQIVDDILDITATQEELG 252
Query: 284 KLAFK 288
K A K
Sbjct: 253 KTAGK 257
>gi|15228704|ref|NP_189589.1| geranylgeranyl diphosphate synthase 11 [Arabidopsis thaliana]
gi|75335025|sp|Q9LIA0.1|GGPPB_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 11,
chloroplastic; Short=GGPP synthase 11; Short=GGPS11;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 11;
AltName: Full=Dimethylallyltranstransferase 11; AltName:
Full=Farnesyl diphosphate synthase 11; AltName:
Full=Farnesyltranstransferase 11; AltName:
Full=Geranyltranstransferase 11; Flags: Precursor
gi|11994525|dbj|BAB02589.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|67633672|gb|AAY78760.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|332644062|gb|AEE77583.1| geranylgeranyl diphosphate synthase 11 [Arabidopsis thaliana]
Length = 357
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 135/247 (54%), Gaps = 10/247 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
KSY E + A L +V ++EP+ + E +R+ + A + P LC+AACELVGG
Sbjct: 64 KSYMIRKAESVSAALNVSVPLQEPLTIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEAT 123
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ AA A+ ++H +S IH++LP D L + KPT + F + +L DA+L E
Sbjct: 124 AMSAACAVEMIHTSSLIHDDLPCMDDADL-RRGKPTNHKEFGEDMAVLAGDALLALAFEH 182
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ-CDDDDRKLNGITDVEM 221
+ N R++R ++E+ +A+G++G+V GQ +L CSQ + DD L + + +
Sbjct: 183 MTFVSNGLVAPE-RMIRAVMELAKAIGTKGLVAGQVTDL-CSQGLNPDDVGLERLEFIHL 240
Query: 222 TYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEE 281
K L A GAI+GGG+E+EIE LR+Y +G++ +V L TE +E
Sbjct: 241 ------HKTAALLEAAAVLGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTKE 294
Query: 282 LKKLAFK 288
L K A K
Sbjct: 295 LGKTAGK 301
>gi|325516284|gb|ADZ24720.1| geranylgeranyl pyrophosphate synthase 3 [Solanum pennellii]
Length = 360
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 129/234 (55%), Gaps = 15/234 (6%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L AV +KEPV ++E MR+ + A + P LC+AACELVGG A+ AA A+ ++H
Sbjct: 84 LESAVSIKEPVMIHESMRYSLLAGGKRIRPMLCIAACELVGGVESTAMPAACAVEMIHTM 143
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGR 176
S IH++LP D L + KPT + + + +L DA+L E +A+ + G +S R
Sbjct: 144 SLIHDDLPCMDNDDL-RRGKPTNHKIYGEDVAVLAGDALLALAFEHIAT--HTKGVSSDR 200
Query: 177 ILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETY--KKKEGRLH 234
I+RV+ E+ + +G++G+V GQ ++ GI+DV++ + + K L
Sbjct: 201 IVRVIGELAKCIGAEGLVAGQVVDIIS----------EGISDVDLKHLEFIHLHKTAALL 250
Query: 235 ACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GAILGG ++++E LR++ +G++ +V L T+ ++L K A K
Sbjct: 251 EGSVVLGAILGGAPDEDVEKLRKFARCIGLLFQVVDDILDVTKSSQQLGKTAGK 304
>gi|434391876|ref|YP_007126823.1| farnesyl-diphosphate synthase [Gloeocapsa sp. PCC 7428]
gi|428263717|gb|AFZ29663.1| farnesyl-diphosphate synthase [Gloeocapsa sp. PCC 7428]
Length = 308
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 127/269 (47%), Gaps = 26/269 (9%)
Query: 30 MMVTMAMSTPNKN-----KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNM 84
M+VT TP + +Y + A L +A+ + P ++YE MR+ + A +
Sbjct: 1 MVVTDNPQTPQEKVPFDLPAYLQQRQSQVEAALDRAIPIAYPEKIYEAMRYSLLAGGKRL 60
Query: 85 APALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFK 144
P LC+A CEL GG E AI A AL ++H S IH++LP D + T + +
Sbjct: 61 RPILCLATCELAGGTTEMAIPTACALEMIHTMSLIHDDLPAMDNDDY-RRGMLTNHKVYG 119
Query: 145 PNTELLVADAMLPFGLELLASSDN--PAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQ 202
+ +L D +L + E +A+ PA R+L+V+ + RA+G+ G+V GQ +L+
Sbjct: 120 EDIAILAGDGLLAYAFEYVAAKTENVPA----PRVLQVISRLGRAVGAAGLVGGQVVDLE 175
Query: 203 CSQCDDDDRKLNGITDVEMTYETY---KKKEGRLHACGAACGAILGGGSEKEIELLRRYG 259
G DV + + K L AC ACGAIL G E +++ L RY
Sbjct: 176 S----------EGKADVSIDTLNFIHNHKTAALLEAC-VACGAILAGAPEADLQRLTRYA 224
Query: 260 FYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
+G+ IV L T EEL K A K
Sbjct: 225 QNIGLAFQIVDDILDITATQEELGKTAGK 253
>gi|376372994|gb|AFB35651.1| chloroplast geranylgeranyl diphosphate synthase 3 [Nicotiana
tabacum]
Length = 363
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 139/274 (50%), Gaps = 23/274 (8%)
Query: 25 LSYRPMMVTMAMSTPNKNKS--------YWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHF 76
LS ++ T + +KNK Y + L +V++K+PV+++E MR+
Sbjct: 47 LSISALLTTKQQTDESKNKKKQAMEFNEYVLEKANSVNKALESSVLIKDPVKIHESMRYS 106
Query: 77 VFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSK 136
+ A + P LC+A+CELVGG A+ AA A+ ++H S IH++LP D L + K
Sbjct: 107 LLAGGKRIRPMLCIASCELVGGDESTAMPAACAVEMIHTMSLIHDDLPCMDNDDL-RRGK 165
Query: 137 PTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEG 196
PT + + + +L DA+L E +A+ G S RI+RV+ E+ + +G++ +V G
Sbjct: 166 PTNHKIYGEDVAVLAGDALLALAFEHIAT--QTKGVPSHRIVRVIGELAKCIGAERLVAG 223
Query: 197 QYNELQCSQCDDDDRKLNGITDVEMTYETY--KKKEGRLHACGAACGAILGGGSEKEIEL 254
Q ++ GI+DV++ + + K L GAILGG +E+E
Sbjct: 224 QVVDIISE----------GISDVDLKHLEFIHLHKTAALLEGSVVLGAILGGADAEEVEK 273
Query: 255 LRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
LR++ +G++ +V L T+ ++L K A K
Sbjct: 274 LRKFARCIGLLFQVVDDILDVTKSSQQLGKTAGK 307
>gi|319788992|ref|YP_004150625.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1]
gi|317113494|gb|ADU95984.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1]
Length = 294
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 113/217 (52%), Gaps = 13/217 (5%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
++YE +++ + + P LC+A CE+VGG+R A+ A A+ ++H S IH++LP D
Sbjct: 31 KLYEAVKYSLTVGGKRLRPILCLAGCEIVGGNRNDALTPACAIEMIHTYSLIHDDLPAMD 90
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
+L + PT + F T +L DA+L E+LA + + R ++V+ E+ RA
Sbjct: 91 NDTL-RRGHPTTWVKFGEATAILAGDALLNRAFEVLADWE----FDCNRKVKVISEIARA 145
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G G+V GQ QCD D + E+ + +K K GRL G I GGG
Sbjct: 146 SGMLGMVLGQ-------QCDLDAEGRGDVPLEELLF-IHKHKTGRLITASVVSGGITGGG 197
Query: 248 SEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
S +EI+ LRRYG +G+ I+ L + E+L K
Sbjct: 198 SPEEIDALRRYGDSLGLAFQIIDDVLDVVGDQEKLGK 234
>gi|297847270|ref|XP_002891516.1| hypothetical protein ARALYDRAFT_891852 [Arabidopsis lyrata subsp.
lyrata]
gi|297337358|gb|EFH67775.1| hypothetical protein ARALYDRAFT_891852 [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 132/251 (52%), Gaps = 10/251 (3%)
Query: 40 NKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGH 99
NK KS ++ + I + K +EV E MR+ + + + P LC+ ACELVGG
Sbjct: 39 NKAKSINKALDDSIPLCNNSVPLWKPVLEVREAMRYTLLSGGKRVRPMLCLVACELVGGQ 98
Query: 100 REQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFG 159
A+ AA A+ ++HA+S I ++LP D SL + KPT + F T +L A+A++
Sbjct: 99 ESTAMPAACAVEMIHASSLILDDLPCMDDDSL-RRGKPTNHKVFGEKTAILAANALMSLA 157
Query: 160 LELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQC--DDDDRKLNGIT 217
+E +S G S R+LR + EM RA+G +G+V GQ +L + + +D L +
Sbjct: 158 VEQTLAS-TSLGVTSERVLRAVQEMARAVGIEGLVAGQAADLAGGRMSFETEDEGLRYLE 216
Query: 218 DVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTE 277
+ + K L A GAI+GGGS++EIE L+ Y VG++ ++ L T+
Sbjct: 217 FIHI------HKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLDETK 270
Query: 278 EIEELKKLAFK 288
EEL K A K
Sbjct: 271 SSEELGKTAGK 281
>gi|428219684|ref|YP_007104149.1| farnesyl-diphosphate synthase [Pseudanabaena sp. PCC 7367]
gi|427991466|gb|AFY71721.1| farnesyl-diphosphate synthase [Pseudanabaena sp. PCC 7367]
Length = 311
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 117/233 (50%), Gaps = 10/233 (4%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L +++ V P +YE MR+ + A + P L +AACEL+GG E A+ A A+ ++H
Sbjct: 33 LDRSIAVTYPETIYEAMRYSLMAGGKRLRPILTLAACELLGGSIEVAMPTACAMEMIHTM 92
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLAS-SDNPAGNNSG 175
S IH++LP D + KPT + + + +L D +L + E +A + +P +
Sbjct: 93 SLIHDDLPAMDNDDF-RRGKPTNHKVYGEDMAILAGDGLLAYAFEYIADRTPSPDHTTAK 151
Query: 176 RILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHA 235
++LRV+ + A+ + G+V GQ +L+C D T +T+ K L A
Sbjct: 152 QVLRVIAHLGHAVAATGLVGGQVVDLECEGKTD-------TTAETLTFIHMHKTAALLEA 204
Query: 236 CGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
C +CGAIL G + +++ L Y +G+ I+ L T E+L K A K
Sbjct: 205 C-VSCGAILAGATAIDLQRLSTYANNIGLAFQIIDDILDITATAEQLGKTAGK 256
>gi|434403680|ref|YP_007146565.1| geranylgeranyl pyrophosphate synthase [Cylindrospermum stagnale PCC
7417]
gi|428257935|gb|AFZ23885.1| geranylgeranyl pyrophosphate synthase [Cylindrospermum stagnale PCC
7417]
Length = 309
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 117/232 (50%), Gaps = 10/232 (4%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L Q++ V P ++YE MR+ + A + P LC+AACE++GG + A+ A AL ++H
Sbjct: 33 LDQSIPVVYPEKIYESMRYSLLAGGKRIRPILCLAACEMMGGTIDMAMPTACALEMIHTM 92
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGR 176
S IH++LP D + K T + + N +L D +L E A+ PA R
Sbjct: 93 SLIHDDLPAMDNDDY-RRGKLTNHKVYGENIAILAGDGLLALAFEFPATQ-TPANVPHER 150
Query: 177 ILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHAC 236
+L+V+ + +A+G+ G+V GQ +L D + KL+ +E + K L
Sbjct: 151 VLQVIARLGKALGAAGLVGGQVVDL------DSEGKLD--ISLETLNFIHNHKTAALLEA 202
Query: 237 GAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
CG +L G S ++I+ L RY +G+ I+ L T +E+L K A K
Sbjct: 203 SVVCGGLLAGASSEDIQRLTRYAQSIGLAFQIIDDILDITATLEQLGKTAGK 254
>gi|325294212|ref|YP_004280726.1| polyprenyl synthetase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325064660|gb|ADY72667.1| Polyprenyl synthetase [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 294
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 110/202 (54%), Gaps = 13/202 (6%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
+YE +++ + + P LC+A CE+VGG+ E+A+ A A+ ++H S IH++LP D
Sbjct: 32 LYEAVKYSLTVGGKRLRPILCMAGCEVVGGNYEEALTPACAIEMIHTYSLIHDDLPAMDN 91
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
+L + PT ++ F T +L DA+L E+L+ + + R ++V+ E+++A
Sbjct: 92 DTL-RRGHPTTWYKFDEATAILAGDALLNRAFEVLSQWN----FDCDRKIKVIEEISKAS 146
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
G G+V GQ QCD D +T E+ + ++ K GRL G I GGGS
Sbjct: 147 GMLGMVLGQ-------QCDMDAEGRKDVTLEELLF-IHRHKTGRLITASVVSGGITGGGS 198
Query: 249 EKEIELLRRYGFYVGMIQGIVS 270
E+EI L++YG +G+ I+
Sbjct: 199 EEEIGTLKKYGDSIGLAFQIID 220
>gi|86609315|ref|YP_478077.1| geranylgeranyl diphosphate synthase [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86557857|gb|ABD02814.1| geranylgeranyl diphosphate synthase [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 297
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 115/246 (46%), Gaps = 12/246 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K+Y + + + L A+V P +YE MR+ + A + P LC+AACEL GG EQ
Sbjct: 9 KAYLSQRQQQVEEALSAALVPAYPERIYEAMRYSLLAGGKRLRPILCLAACELAGGTVEQ 68
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ A AL ++H S IH++LP D + KPT + F + +L DA+L F E
Sbjct: 69 ALPTACALEMIHTMSLIHDDLPAMDNDDF-RRGKPTNHKVFGEDIAILAGDALLAFAFEH 127
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+AS G +L+V+ + A+ + G+V GQ +L+ +E
Sbjct: 128 IASQTQ--GVPPQLVLQVIARIGHAVAATGLVGGQVVDLESE---------GKAISLETL 176
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
+ K G L G IL GG E+ + L RY +G+ IV L T E+L
Sbjct: 177 EYIHSHKTGALLEVSVVSGGILAGGDEELLAHLSRYARDIGLAFQIVDDILDITATSEQL 236
Query: 283 KKLAFK 288
K A K
Sbjct: 237 GKTAGK 242
>gi|18146809|dbj|BAB82463.1| geranylgeranyl pyrophosphate synthase [Gentiana lutea]
Length = 367
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 127/249 (51%), Gaps = 15/249 (6%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K+Y + L QAV VK P ++E MR+ + A + P LC+AACELVGG
Sbjct: 75 KAYLIEKANKVNEALDQAVSVKNPPMIHEAMRYSLLAGGKRVRPILCIAACELVGGEESN 134
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
++ AA A+ ++H S IH++LP + L + + +L D++L F E
Sbjct: 135 SVPAACAVEMIHTMSLIHDDLPCYGQRDLRRGKAHETTKSSCEDVAVLAGDSLLAFSFEY 194
Query: 163 LASSD---NPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDV 219
+A++ +PA N S R R+ ++++G++G+V GQ + + + ++ G+ +
Sbjct: 195 IATATKNVSPAKNFS-RSRRI----SKSIGTEGLVAGQVADFVI----NGENQMFGLDQL 245
Query: 220 EMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEI 279
E + K L GAILGGG+ +E+E LRR+ +G++ +V L T+
Sbjct: 246 EF---IHIHKTAALLEAAVVLGAILGGGNPEEVEKLRRFARCIGLLFQVVDDILDVTKSS 302
Query: 280 EELKKLAFK 288
EEL K A K
Sbjct: 303 EELGKTAGK 311
>gi|356572072|ref|XP_003554194.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Glycine max]
Length = 343
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 134/258 (51%), Gaps = 17/258 (6%)
Query: 37 STPNKN-KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACEL 95
S PN + K+Y + L AV ++EP +++E MR+ + A + P LC+AAC L
Sbjct: 41 SAPNFDFKAYMLDKINTVNRALDAAVALREPRKLHEAMRYTLLAGGKRIRPVLCLAACSL 100
Query: 96 VGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAM 155
VGG AI AA A+ ++H S IH++LP D L + KPT + F + +L DA+
Sbjct: 101 VGGSEATAIPAACAVEMIHTMSLIHDDLPCMDNDDL-RRGKPTSHKIFGEHVAVLAGDAL 159
Query: 156 LPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNE-----LQCSQCDDDD 210
L E +A+S G + R++R + E+ + +G++GV+ GQ + L S D+
Sbjct: 160 LALAFEHVAASTE--GAYAARVVRAIGELAKCIGAEGVMAGQVVDVNSEGLTLSMSDE-- 215
Query: 211 RKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVS 270
+ +E + K + GAILGGGS++EIE LR +G +G++ +V
Sbjct: 216 -----VAVLERLEFIHVHKTAVVEG-AVVMGAILGGGSDEEIERLRMFGRCIGLLGQVVD 269
Query: 271 RRLGPTEEIEELKKLAFK 288
L T+ EEL K A K
Sbjct: 270 DVLDVTKSSEELGKTAKK 287
>gi|2578822|dbj|BAA23157.1| geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 343
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 137/255 (53%), Gaps = 18/255 (7%)
Query: 40 NKNKSYWTSVHEDIGAHLRQAVVVKEPV-EVYEPMRHFVFAAPVNMAPALCVAACELVGG 98
NK KS ++ I +V + EPV EV++ MR+ + + + P LC+ ACELVGG
Sbjct: 45 NKAKSINKALDNSI-PLCNNSVPLWEPVLEVHKAMRYTLLSGGKRVRPMLCLVACELVGG 103
Query: 99 HREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPF 158
A+ AA A+ ++HAAS I ++LP D SL + PT + F T +L ++A++
Sbjct: 104 QESTAMPAACAVEMIHAASLILDDLPCMDDDSL-RRGIPTNHKVFGEKTSILASNALMSL 162
Query: 159 GL-ELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQC----DDDDRKL 213
+ + LAS+ G S R+LR + EM RA+G++G+V GQ +L + +DD+ +
Sbjct: 163 AVKQTLAST--SLGVTSERVLRAVQEMARAVGTEGLVAGQAADLAGERMSFKNEDDELRY 220
Query: 214 NGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRL 273
+ V T + A GAI+GGGS++EIE L+ Y VG++ ++ L
Sbjct: 221 LELMHVHKTAVLVEAA--------AVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVL 272
Query: 274 GPTEEIEELKKLAFK 288
T+ EEL K A K
Sbjct: 273 DETKSSEELGKTAGK 287
>gi|15222767|ref|NP_175376.1| geranylgeranyl pyrophosphate synthase 1 [Arabidopsis thaliana]
gi|85540951|sp|O22043.2|GGPP6_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 6,
mitochondrial; Short=GGPP synthase 6; Short=GGPS6;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 6;
AltName: Full=Dimethylallyltranstransferase 6; AltName:
Full=Farnesyl diphosphate synthase 6; AltName:
Full=Farnesyltranstransferase 6; AltName:
Full=Geranyltranstransferase 6; Flags: Precursor
gi|5430748|gb|AAD43148.1|AC007504_3 geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|40823199|gb|AAR92266.1| At1g49530 [Arabidopsis thaliana]
gi|45752710|gb|AAS76253.1| At1g49530 [Arabidopsis thaliana]
gi|332194318|gb|AEE32439.1| geranylgeranyl pyrophosphate synthase 1 [Arabidopsis thaliana]
Length = 336
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 126/230 (54%), Gaps = 17/230 (7%)
Query: 65 EPV-EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
EPV EV++ MR+ + + P LC+ ACELVGG A+ AA A+ ++HAAS I ++L
Sbjct: 62 EPVLEVHKAMRYTLLPGGKRVRPMLCLVACELVGGQESTAMPAACAVEMIHAASLILDDL 121
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGL-ELLASSDNPAGNNSGRILRVMV 182
P D SL + KPT + F T +L ++A+ + + LAS+ G S R+LR +
Sbjct: 122 PCMDDDSL-RRGKPTNHKVFGEKTSILASNALRSLAVKQTLASTS--LGVTSERVLRAVQ 178
Query: 183 EMTRAMGSQGVVEGQYNELQCSQC----DDDDRKLNGITDVEMTYETYKKKEGRLHACGA 238
EM RA+G++G+V GQ +L + +DD+ + + V T + A
Sbjct: 179 EMARAVGTEGLVAGQAADLAGERMSFKNEDDELRYLELMHVHKTAVLVEAA--------A 230
Query: 239 ACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GAI+GGGS++EIE L+ Y VG++ ++ L T+ EEL K A K
Sbjct: 231 VVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLDETKSSEELGKTAGK 280
>gi|424513337|emb|CCO65959.1| geranylgeranyl pyrophosphate synthase [Bathycoccus prasinos]
Length = 376
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 128/258 (49%), Gaps = 10/258 (3%)
Query: 34 MAMSTPNKNKSYWTSVHED---IGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCV 90
MA++ N + V E I L +V P ++E MR+ + A + P L +
Sbjct: 70 MAVADTNAEIDFAKYVKEKNAAIEQALSDSVPTIYPERLHESMRYSLLAGGKRIRPCLAI 129
Query: 91 AACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELL 150
AACE+VGG +E + A AL ++H S IH++LP+ D + PT + + +L
Sbjct: 130 AACEMVGGAQEVVMPTACALEMIHTMSLIHDDLPMMDNDDF-RRGVPTNHKVYGEEMAIL 188
Query: 151 VADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDD 210
DA+L E +A G + +ILRV+ ++ + +GS+G+V GQ +++ +
Sbjct: 189 AGDALLSHAFEYIARETK--GVPAEKILRVIADVGKCVGSEGLVGGQVVDIESEGLAMEG 246
Query: 211 RKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVS 270
+ ++ +E + K G L GAILGGG+E++IE L +Y + +G+ +V
Sbjct: 247 KPVS----LETLKYIHAHKTGALLETAVVSGAILGGGTEEDIERLGKYAYDIGLAFQVVD 302
Query: 271 RRLGPTEEIEELKKLAFK 288
L T EEL K A K
Sbjct: 303 DILDCTATSEELGKTAGK 320
>gi|428780839|ref|YP_007172625.1| geranylgeranyl pyrophosphate synthase [Dactylococcopsis salina PCC
8305]
gi|428695118|gb|AFZ51268.1| geranylgeranyl pyrophosphate synthase [Dactylococcopsis salina PCC
8305]
Length = 305
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 124/251 (49%), Gaps = 11/251 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
+SY + I L Q++ + EP +YE MR+ + A + P LC+A CELVGG E
Sbjct: 16 ESYLQARKAIIEKALDQSLPIAEPPVIYEAMRYSLLAGGKRLRPILCLATCELVGGTIEM 75
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ A AL ++H S IH++LP D + + T + + + +L D +L + E
Sbjct: 76 AMPTACALEMIHTMSLIHDDLPAMDNDDY-RRGQLTNHKKYGEDIAILAGDGLLAYAFEY 134
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+A+ G N +LRV+ ++ +G+ G+V GQ +L S+ + D I+ +
Sbjct: 135 VAAQTQ--GVNPSSVLRVIAKLGHTVGATGLVGGQVLDL-ASEGNPD------ISLETLN 185
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
Y K L AC GAILG SE+ + L RY + +G+ I+ L T EEL
Sbjct: 186 YIHTHKTGALLEAC-VVTGAILGEASEETLAALSRYAYNIGLAFQIIDDILDITATQEEL 244
Query: 283 KKLAFKLREVN 293
K A K E +
Sbjct: 245 GKTAGKDVEAD 255
>gi|186510058|ref|NP_188073.2| geranylgeranyl diphosphate synthase 3 [Arabidopsis thaliana]
gi|332642016|gb|AEE75537.1| geranylgeranyl diphosphate synthase 3 [Arabidopsis thaliana]
Length = 360
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 129/248 (52%), Gaps = 12/248 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K Y E + A L +V ++EP+ V E +R+ + A + P LC+A CELVGG
Sbjct: 67 KLYMIRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEAT 126
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE- 161
A+ AA A+ ++H +S IH++LP D L + KPT + + + +L DA+L E
Sbjct: 127 AMSAACAVEMIHTSSLIHDDLPCMDNADL-RRGKPTNHKVYGEDMAVLAGDALLALAFEH 185
Query: 162 -LLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVE 220
SS A R++R +VE+ RA+G+ G+V GQ +L + + D L + +
Sbjct: 186 MTFVSSGLVAPE---RMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIH 242
Query: 221 MTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
+ K L A G I+GGG+E+EIE LR+Y +G++ +V L T+ E
Sbjct: 243 L------HKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTE 296
Query: 281 ELKKLAFK 288
EL K A K
Sbjct: 297 ELGKTAGK 304
>gi|75274213|sp|Q9LUD9.1|GGPP3_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 3,
chloroplastic; Short=GGPP synthase 3; Short=GGPS3;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 3;
AltName: Full=Dimethylallyltranstransferase 3; AltName:
Full=Farnesyl diphosphate synthase 3; AltName:
Full=Farnesyltranstransferase 3; AltName:
Full=Geranyltranstransferase 3; Flags: Precursor
gi|9294377|dbj|BAB02387.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 360
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 130/248 (52%), Gaps = 12/248 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K Y E + A L +V ++EP+ V E +R+ + A + P LC+A CELVGG
Sbjct: 67 KLYMIRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEAT 126
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE- 161
A+ AA A+ ++H +S IH++LP D L + KPT + + + +L DA+L E
Sbjct: 127 AMSAACAVEMIHTSSLIHDDLPCMDNADL-RRGKPTNHKVYGEDMAVLAGDALLALAFEH 185
Query: 162 -LLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVE 220
+ SS A R++R +VE+ RA+G+ G+V GQ +L + + D L + +
Sbjct: 186 MTVVSSGLVAPE---RMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIH 242
Query: 221 MTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
+ K L A G I+GGG+E+EIE LR+Y +G++ +V L T+ E
Sbjct: 243 L------HKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTE 296
Query: 281 ELKKLAFK 288
EL K A K
Sbjct: 297 ELGKTAGK 304
>gi|428203147|ref|YP_007081736.1| geranylgeranyl pyrophosphate synthase [Pleurocapsa sp. PCC 7327]
gi|427980579|gb|AFY78179.1| geranylgeranyl pyrophosphate synthase [Pleurocapsa sp. PCC 7327]
Length = 309
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 119/247 (48%), Gaps = 15/247 (6%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
SY + + A L +++ + +P ++YE MR+ + A + P LC+A CEL GG E A
Sbjct: 21 SYLEEKKQLVEAALERSLSIGKPEKIYEAMRYSLLAGGKRLRPILCLATCELTGGTTEMA 80
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ A AL ++H S IH++LP D + K T + F + +L D +L + E +
Sbjct: 81 MPTACALEMIHTMSLIHDDLPAMDNDDY-RRGKLTNHKVFGEDIAILAGDGLLAYAFEYV 139
Query: 164 ASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTY 223
A+ RIL V+ + R +G+ G+V GQ +L+ G +D+ +
Sbjct: 140 AAQTQNVPPQ--RILDVIARLGRTVGAAGLVGGQVLDLES----------EGKSDISVDT 187
Query: 224 ETY--KKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEE 281
T+ K G L GA+L G S+ EI+ L +Y +G+ IV L T EE
Sbjct: 188 LTFIHTHKTGALLETSVVSGAMLAGASDDEIQRLSKYAQDIGLAFQIVDDILDITATQEE 247
Query: 282 LKKLAFK 288
L K A K
Sbjct: 248 LGKTAGK 254
>gi|254409375|ref|ZP_05023156.1| polyprenyl synthetase superfamily [Coleofasciculus chthonoplastes
PCC 7420]
gi|196183372|gb|EDX78355.1| polyprenyl synthetase superfamily [Coleofasciculus chthonoplastes
PCC 7420]
Length = 309
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 121/247 (48%), Gaps = 15/247 (6%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
+Y + A L +++ + P ++YE MR+ + A + P LC+A CEL+GG E A
Sbjct: 21 TYLKERKAQVEAALDRSLPLGYPEKIYEAMRYSLLAGGKRLRPILCLATCELMGGTMEMA 80
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ A AL ++H S IH++LP D + K T + + + +L D +L + E +
Sbjct: 81 MPTACALEMLHTMSLIHDDLPAMDNDD-YRRGKLTNHKVYGEDMAILAGDGLLAYAFEYV 139
Query: 164 ASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDV--EM 221
A+ G + R+L+V+ + R +G+ G+V GQ +L+ G +D+ E
Sbjct: 140 ATQTQ--GVPAERVLQVIARLGRTVGAAGLVGGQVVDLES----------EGKSDIQEET 187
Query: 222 TYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEE 281
+ + K G L CG IL G ++ +IE L RY +G+ I+ L T EE
Sbjct: 188 LHYIHTHKTGALLETCVVCGGILAGATDADIERLSRYAQNIGLAFQIIDDILDITATQEE 247
Query: 282 LKKLAFK 288
L K A K
Sbjct: 248 LGKTAGK 254
>gi|374639387|gb|AEZ55682.1| geranylgeranyl diphosphate synthase 2 [Salvia miltiorrhiza]
Length = 346
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 141/270 (52%), Gaps = 13/270 (4%)
Query: 19 NHSRPSLSYRPMMVTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVF 78
N + P+ S M T+ +S K + Y S + + L AV ++ P+++++ MR+ +
Sbjct: 34 NKTTPTSSIE-MQQTLKISPNFKFEEYMASKAKKVNTALDDAVPLQNPLKIHQAMRYSLL 92
Query: 79 AAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPT 138
A + P LC+A+CELVGG A+ A AL ++H S IH++LP D L + +PT
Sbjct: 93 AGGKRVRPVLCLASCELVGGEEAAAVPMACALEMIHTMSLIHDDLPCMDNDDL-RRGRPT 151
Query: 139 MYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQY 198
+ F T +L DA+L E +A+ + R+++ +VE+ A+GS+G+V GQ
Sbjct: 152 CHKEFGEETAVLAGDALLALAFEHVAAKTRNV--DERRVVQAIVELGSAVGSEGLVAGQI 209
Query: 199 NELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRY 258
+L + KL + ++E + K +L CGAI+GGG ++E LR+Y
Sbjct: 210 VDLS------SEGKLLSLGELEY---IHVHKTSKLLEAAVVCGAIMGGGGGAQVEALRKY 260
Query: 259 GFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
VG++ +V L T+ EEL K A K
Sbjct: 261 ARCVGLLFQVVDDILDVTKTSEELGKTAGK 290
>gi|443477457|ref|ZP_21067303.1| Farnesyltranstransferase [Pseudanabaena biceps PCC 7429]
gi|443017422|gb|ELS31868.1| Farnesyltranstransferase [Pseudanabaena biceps PCC 7429]
Length = 307
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 121/244 (49%), Gaps = 11/244 (4%)
Query: 45 YWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAI 104
Y + +++ A L ++ V P ++YE MR+ + A + P LC+AA EL+GG A+
Sbjct: 20 YLRDLKQEVEAALDASISVTYPEKIYESMRYSLMAGGKRLRPILCLAAHELLGGDLAAAM 79
Query: 105 VAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA 164
A A+ ++H S IH++LP D + KPT + + + +L DA+L + E +A
Sbjct: 80 PTACAMEMVHTMSLIHDDLPAMDNDDF-RRGKPTNHKVYGDDIAILAGDALLAYAFEFIA 138
Query: 165 SSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYE 224
G + RIL+ + + A+ + G+V GQ +L+C D +T +T+
Sbjct: 139 VQTK--GVPAERILKAIAHLGHAVAATGLVGGQVVDLECEGKSD-------VTAEILTFI 189
Query: 225 TYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
K L +C CGA+L G ++ +I+ L Y +G+ I+ L T E+L K
Sbjct: 190 HIHKTAALLESC-VICGALLAGANDTDIKRLSTYANNIGLAFQIIDDILDITATSEQLGK 248
Query: 285 LAFK 288
A K
Sbjct: 249 TAGK 252
>gi|172035793|ref|YP_001802294.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. ATCC 51142]
gi|354555029|ref|ZP_08974332.1| Farnesyltranstransferase [Cyanothece sp. ATCC 51472]
gi|171697247|gb|ACB50228.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. ATCC 51142]
gi|353553183|gb|EHC22576.1| Farnesyltranstransferase [Cyanothece sp. ATCC 51472]
Length = 309
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 123/261 (47%), Gaps = 19/261 (7%)
Query: 32 VTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVA 91
VT ++ SY + + A L Q++ + P ++YE MR+ + A + P LC+
Sbjct: 9 VTQTETSDFDLASYLKEKKQLVEAALDQSLPITRPEKIYEAMRYSLLAGGKRLRPILCLT 68
Query: 92 ACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLV 151
CEL+GG RE ++ A AL ++H S IH++LP D + K T + + + +L
Sbjct: 69 TCELMGGTREMSLPTACALEMIHTMSLIHDDLPAMDNDDY-RRGKLTNHKVYGEDIAILA 127
Query: 152 ADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDR 211
DA+L + E +A+ + ++ V+ + R +G+ G+V GQ +L+
Sbjct: 128 GDALLSYAFEYVATQTRNV--DLANLMDVIARLGRTVGAAGLVGGQVLDLES-------- 177
Query: 212 KLNGITDVEMTYETYK----KKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQG 267
G DV T +T K K G L GAIL G ++IE L RY +G+
Sbjct: 178 --EGRADV--TVDTLKFIHIHKTGALLETSVVSGAILAGAKPEDIERLSRYAQNIGLAFQ 233
Query: 268 IVSRRLGPTEEIEELKKLAFK 288
I+ L T EEL K A K
Sbjct: 234 IIDDILDVTASTEELGKTAGK 254
>gi|428772609|ref|YP_007164397.1| farnesyl-diphosphate synthase [Cyanobacterium stanieri PCC 7202]
gi|428686888|gb|AFZ46748.1| farnesyl-diphosphate synthase [Cyanobacterium stanieri PCC 7202]
Length = 294
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 125/250 (50%), Gaps = 19/250 (7%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
+SY + + L +++ + +P ++YE MR+ + A + P LC+A CEL+GG E
Sbjct: 5 QSYLKEKQKLVEKSLDESLPMGKPEKIYESMRYSLLAGGKRLRPILCLATCELMGGTDEM 64
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ +A AL ++H S IH++LP D + K T + + + +L D +L + E
Sbjct: 65 ALPSACALEMIHTMSLIHDDLPAMDNDD-YRRGKLTNHKVYGDDIAILAGDGLLTYAFEY 123
Query: 163 LASSDN--PAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDV- 219
+A PA N +L V+ +T+A+G++G+V GQ +L+C G TDV
Sbjct: 124 VARETKGVPAEN----VLEVIKILTKAVGAEGLVGGQVMDLEC----------EGKTDVT 169
Query: 220 -EMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEE 278
EM + K G L GA+L G +++++ L Y +G+ I+ L T
Sbjct: 170 AEMLSFIHIHKTGALLEACVTSGAVLAGATQEDLSRLSIYAKNIGLAFQIIDDILDVTAT 229
Query: 279 IEELKKLAFK 288
EEL K A K
Sbjct: 230 TEELGKTAGK 239
>gi|124026221|ref|YP_001015337.1| polyprenyl synthetase [Prochlorococcus marinus str. NATL1A]
gi|123961289|gb|ABM76072.1| Polyprenyl synthetase [Prochlorococcus marinus str. NATL1A]
Length = 299
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 120/242 (49%), Gaps = 16/242 (6%)
Query: 47 TSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVA 106
T V + +GA L ++P ++ E MR+ + A + P LC+AACEL GG E+A+
Sbjct: 19 TRVEDALGASLGP----EKPEKLRESMRYSLLAGGKRLRPILCLAACELAGGELEKALPT 74
Query: 107 AAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASS 166
A AL ++H S IH++LP D L + +PT + + +L DA+L E++ S
Sbjct: 75 AVALEMIHTMSLIHDDLPSMDNDDL-RRGRPTNHKVYGDAVAILAGDALLTRAFEMV--S 131
Query: 167 DNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETY 226
G S R+L+++ E++ A G+ G+V GQ +L C + D+E +
Sbjct: 132 IRTEGIPSERLLKIIGELSLAAGAPGLVGGQVVDLDCEGKE---------VDLETLEYIH 182
Query: 227 KKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLA 286
K G L CGA++GG EK ++ L Y +G+ I+ L T E L K A
Sbjct: 183 LHKTGALLKACVTCGALIGGADEKLLDALSIYARGIGLAFQIIDDILDVTASSEVLGKTA 242
Query: 287 FK 288
K
Sbjct: 243 GK 244
>gi|427418987|ref|ZP_18909170.1| geranylgeranyl pyrophosphate synthase [Leptolyngbya sp. PCC 7375]
gi|425761700|gb|EKV02553.1| geranylgeranyl pyrophosphate synthase [Leptolyngbya sp. PCC 7375]
Length = 302
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 113/243 (46%), Gaps = 15/243 (6%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
SY + D+ A L Q++ V P +YE MR+ V A + P LC+A CELVGG QA
Sbjct: 14 SYLATKGADVEAALDQSLAVVYPEIIYESMRYSVMAGGKRLRPILCLATCELVGGTSAQA 73
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ A AL ++H S IH++LP D + K T + + + +L DA+L + E +
Sbjct: 74 MPTACALEMVHTMSLIHDDLPAMDNDDY-RRGKLTNHKVYGDDVAILAGDALLAYAFEFI 132
Query: 164 A--SSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEM 221
A + D PA +L V+ + A+G+ G+V GQ +L D T +E
Sbjct: 133 ADRTEDVPA----TAVLDVIRRLGHAVGAAGLVGGQIVDLASEGKPD--------TSIET 180
Query: 222 TYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEE 281
+ K L GA+L G IE L RY +G+ IV L T EE
Sbjct: 181 LNFIHIHKTAALLEVSVVSGAVLAGADNDTIERLSRYAQNIGLAFQIVDDVLDVTSTQEE 240
Query: 282 LKK 284
L K
Sbjct: 241 LGK 243
>gi|224069444|ref|XP_002302978.1| predicted protein [Populus trichocarpa]
gi|222844704|gb|EEE82251.1| predicted protein [Populus trichocarpa]
Length = 287
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 124/232 (53%), Gaps = 12/232 (5%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L +AV ++ P +++E MR+ + A + P LC+A+CELVGG E A+ A AL ++H
Sbjct: 12 LDEAVPLQHPRKIHEAMRYSLLAGGKRVRPILCIASCELVGGDEELAMPTACALEMIHTM 71
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGR 176
S IH++LP D L + PT + F +T +L DA+L E +A N +S R
Sbjct: 72 SLIHDDLPCMDNDDL-RRGMPTSHKVFGEDTAVLAGDALLALAFEHVAR--NTKNVSSDR 128
Query: 177 ILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHAC 236
+++ + E+ A+GS+G+V GQ +++ + K ++ +E + K +L
Sbjct: 129 VVQALAELGSAVGSKGLVAGQVVDIES------EGKEVSLSTLEY---IHVHKTAKLLEA 179
Query: 237 GAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
CGAI+GG +E LR+Y +G++ +V L T+ EEL K A K
Sbjct: 180 AVVCGAIMGGADATSVERLRKYARSIGLLFQVVDDILDMTKSSEELGKTAGK 231
>gi|433654909|ref|YP_007298617.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293098|gb|AGB18920.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 293
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 102/200 (51%), Gaps = 11/200 (5%)
Query: 65 EPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLP 124
+P +Y+ MR+ VFA + P LC+++CELVGG R+ A+ A A+ +H S IH++LP
Sbjct: 26 KPEILYDAMRYSVFAGGKRLRPVLCISSCELVGGDRDDALPVACAIEFIHTYSLIHDDLP 85
Query: 125 LSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEM 184
D L + KPT + + +L DA+L +G E+L + N ILR + E+
Sbjct: 86 AMDNDDL-RRGKPTNHKVYGEALAILAGDALLNYGFEVLIHHALDSA-NCQNILRAIEEI 143
Query: 185 TRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAIL 244
A G G++ GQ +L IT+ E+ + + K G L GAI+
Sbjct: 144 AHAAGCHGMIGGQVVDLLSEN--------KNITEEELKF-MHDHKTGALIKASVVAGAIM 194
Query: 245 GGGSEKEIELLRRYGFYVGM 264
GG ++ I+ L Y Y+G+
Sbjct: 195 GGADDETIKKLSDYAEYIGL 214
>gi|20807745|ref|NP_622916.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
tengcongensis MB4]
gi|20516298|gb|AAM24520.1| Geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
tengcongensis MB4]
Length = 294
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 23/229 (10%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKE-PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHRE 101
K + ++ + + L + + V+E P +YE MR+ VFA + P LC++ACEL+GG +
Sbjct: 3 KEKFKNLQQMVEEELHRILDVQEKPEIIYEAMRYSVFAGGKRLRPVLCLSACELLGGDLK 62
Query: 102 QAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE 161
+A+ A ++ ++H S IH++LP D L + KPT + F +L D +L G E
Sbjct: 63 KALPVACSIELIHTYSLIHDDLPAMDNDDL-RRGKPTNHKVFGEAIAILAGDGLLNLGYE 121
Query: 162 LLA--SSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDV 219
+L + +NP + +IL+ E+ A G +G++ GQ ++ SQ +
Sbjct: 122 VLIRHALENP--EDYEKILKAANEIATASGCKGIIGGQVEDI-LSQ------------NT 166
Query: 220 EMTYETYK----KKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
E+TYE K K L GA + G SEKE+ELLR Y +G+
Sbjct: 167 ELTYEELKYIHEHKTAALIEASVCAGAHMAGASEKEVELLREYAGLIGL 215
>gi|26450928|dbj|BAC42571.1| putative geranylgeranyl pyrophosphate synthase GGPS3 [Arabidopsis
thaliana]
Length = 360
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 129/248 (52%), Gaps = 12/248 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K Y E + A L +V ++EP+ V E +R+ + A + P LC+A CELVGG
Sbjct: 67 KLYMIRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEAT 126
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE- 161
A+ AA A+ ++H +S IH++LP D L + KPT + + + +L DA+L E
Sbjct: 127 AMSAACAVEMIHTSSLIHDDLPCMDNADL-RRGKPTNHKVYGEDMAVLAGDALLALAFEH 185
Query: 162 -LLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVE 220
+ SS A R++R +VE+ R +G+ G+V GQ +L + + D L + +
Sbjct: 186 MTVVSSGLVAPE---RMIRAVVELARTIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIH 242
Query: 221 MTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
+ K L A G I+GGG+E+EIE LR+Y +G++ +V L T+ E
Sbjct: 243 L------HKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTE 296
Query: 281 ELKKLAFK 288
EL K A K
Sbjct: 297 ELGKTAGK 304
>gi|220906408|ref|YP_002481719.1| polyprenyl synthetase [Cyanothece sp. PCC 7425]
gi|219863019|gb|ACL43358.1| Polyprenyl synthetase [Cyanothece sp. PCC 7425]
Length = 320
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 116/245 (47%), Gaps = 11/245 (4%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
SY + + A L Q++ V P ++Y+ MR+ + A + P LC+A CE+ GG E A
Sbjct: 32 SYLKERQQWVDAALEQSISVTYPEKIYQAMRYSLMAGGKRLRPILCLATCEMTGGTVEMA 91
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ A AL ++H S IH++LP D + K T + + + +L D +L + E +
Sbjct: 92 MPTACALEMIHTMSLIHDDLPAMDNDDY-RRGKLTNHKVYGEDIAILAGDGLLAYAFEYV 150
Query: 164 ASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTY 223
A G + +L+V+ + A+ + G+V GQ +L+C D VE
Sbjct: 151 AVKTQ--GVPAEWLLKVVARLGHAVAATGLVGGQVVDLECEGVKD--------VSVETLN 200
Query: 224 ETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELK 283
+ K G L CGA L G S++ ++ L RY VG+ I+ L T EEL
Sbjct: 201 FIHAHKTGALLEASVLCGAYLTGASDEVLQKLSRYARNVGLAFQIIDDVLDITATQEELG 260
Query: 284 KLAFK 288
K A K
Sbjct: 261 KTAGK 265
>gi|72382520|ref|YP_291875.1| polyprenyl synthetase [Prochlorococcus marinus str. NATL2A]
gi|72002370|gb|AAZ58172.1| farnesyl-diphosphate synthase [Prochlorococcus marinus str. NATL2A]
Length = 299
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 113/225 (50%), Gaps = 12/225 (5%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
++P ++ E MR+ + A + P LC+AACEL GG E+A+ A AL ++H S IH++L
Sbjct: 32 EKPEKLRESMRYSLLAGGKRLRPILCLAACELAGGELEKALPTAVALEMIHTMSLIHDDL 91
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE 183
P D L + +PT + + +L DA+L E++ S G S R+L+++ E
Sbjct: 92 PSMDNDDL-RRGRPTNHKVYGDAVAILAGDALLTRAFEMV--SIRTEGIPSERLLKIIGE 148
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAI 243
++ A G+ G+V GQ +L C + D+E + K G L CGA+
Sbjct: 149 LSLAAGAPGLVGGQVVDLDCEGKE---------VDLETLEYIHLHKTGALLKACVTCGAL 199
Query: 244 LGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
+GG EK +E L Y +G+ I+ L T E L K A K
Sbjct: 200 IGGADEKLLEALSIYARGIGLAFQIIDDILDVTASSEVLGKTAGK 244
>gi|434399896|ref|YP_007133900.1| Farnesyltranstransferase [Stanieria cyanosphaera PCC 7437]
gi|428270993|gb|AFZ36934.1| Farnesyltranstransferase [Stanieria cyanosphaera PCC 7437]
Length = 320
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 117/234 (50%), Gaps = 15/234 (6%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L ++ + +P ++YE MR+ + A + P LC+A CEL GG E AI A AL ++H
Sbjct: 45 LDSSLPINQPAKIYEAMRYSLLAGGKRLRPILCLATCELTGGSNEMAIPTACALEMIHTM 104
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDN--PAGNNS 174
S IH++LP D + K T + + + +L D +L + E +A+ PA
Sbjct: 105 SLIHDDLPAMDNDDY-RRGKLTNHKVYGEDIAILAGDGLLAYAFEYVATQTKNVPA---- 159
Query: 175 GRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLH 234
RI++V+ + R +G++G+V GQ +L+ D I+ +T+ + K G L
Sbjct: 160 ERIVKVIARLGRTVGAEGLVGGQVLDLESEGKSD-------ISAETLTF-IHTHKTGALL 211
Query: 235 ACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GAIL G SE+++ L +Y +G+ I+ L T E+L K A K
Sbjct: 212 EASVVSGAILSGASEEDLARLSKYAQNIGLAFQIIDDILDITATDEQLGKTAGK 265
>gi|186683902|ref|YP_001867098.1| polyprenyl synthetase [Nostoc punctiforme PCC 73102]
gi|186466354|gb|ACC82155.1| Polyprenyl synthetase [Nostoc punctiforme PCC 73102]
Length = 310
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 116/232 (50%), Gaps = 10/232 (4%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L +A+ + P ++YE MR+ + A + P LC+A CE++GG E A+ A A+ ++H
Sbjct: 34 LDRAIPIIYPEKIYEAMRYSLLAGGKRVRPILCLATCEMMGGTIEMAMPTACAVEMIHTM 93
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGR 176
S IH++LP D + K T + + + +L D +L EL+A PA N
Sbjct: 94 SLIHDDLPAMDNDDY-RRGKLTNHKVYGEDVAILAGDGLLALAFELVALK-TPANVNREL 151
Query: 177 ILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHAC 236
L+V+V + RA+G+ G+V GQ +L+C D I+ + + K L AC
Sbjct: 152 TLQVIVRLGRALGAAGLVGGQVVDLECEGKSD-------ISLETLNFIHRHKTSALLEAC 204
Query: 237 GAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
G I+ G S ++++ L RY +G+ I+ L T E+L K A K
Sbjct: 205 -VVSGGIIAGASTEDVQRLTRYAENIGLAFQIIDDILDITSTKEQLGKTAGK 255
>gi|427717935|ref|YP_007065929.1| farnesyl-diphosphate synthase [Calothrix sp. PCC 7507]
gi|427350371|gb|AFY33095.1| farnesyl-diphosphate synthase [Calothrix sp. PCC 7507]
Length = 309
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 111/232 (47%), Gaps = 10/232 (4%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L QA+ + P ++YE MR+ + A + P LC+A CE+ GG + A+ A A+ ++H
Sbjct: 33 LDQAIPIIYPEKIYESMRYSLLAGGKRVRPILCLATCEMTGGTIDMAMPTACAVEMIHTM 92
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGR 176
S IH++LP D + K T + + + +L D +L F E +A P R
Sbjct: 93 SLIHDDLPAMDNDDY-RRGKLTNHKVYGEDVAILAGDGLLAFAFEFVAKQ-TPQDVPRDR 150
Query: 177 ILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHAC 236
+L V+ + RA+G+ G+V GQ +L+ D T +E + K L
Sbjct: 151 VLDVVARLGRALGAAGLVGGQVVDLESEGKSD--------TSLETLNFIHNHKTAALLEA 202
Query: 237 GAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
CG IL G S ++++ L RY +G+ IV L T E+L K A K
Sbjct: 203 SVVCGGILTGASSEDVQRLTRYAQNIGLAFQIVDDILDITATQEQLGKTAGK 254
>gi|443323350|ref|ZP_21052357.1| geranylgeranyl pyrophosphate synthase [Gloeocapsa sp. PCC 73106]
gi|442786914|gb|ELR96640.1| geranylgeranyl pyrophosphate synthase [Gloeocapsa sp. PCC 73106]
Length = 309
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 126/249 (50%), Gaps = 17/249 (6%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K+Y + I A L +++ + +P ++YE MR+ + A + P LC+A CEL+GG
Sbjct: 20 KTYLDAQKTIIEAALDRSLSISKPEKIYEAMRYSLLAGGKRLRPILCLATCELMGGTSVI 79
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ A AL ++H S IH++LP D + K T + + + +L D +L + E
Sbjct: 80 ALPTACALEMIHTMSLIHDDLPAMDNDDY-RRGKLTNHKVYGDDIAILAGDGLLAYAFEY 138
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVE-- 220
+A+ G R+++V++ ++ A+G++G+V GQ +L+ G TD+
Sbjct: 139 VAT--QTQGVPPERLIKVIIHLSHAVGAEGLVGGQVLDLES----------EGKTDISAE 186
Query: 221 -MTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEI 279
+T+ K L AC GA L G + +++E L +Y +G+ I+ L T +
Sbjct: 187 TLTFIHTHKTGALLEAC-VLSGADLAGANREDLERLSKYAQNIGLAFQIIDDILDITATV 245
Query: 280 EELKKLAFK 288
EEL K A K
Sbjct: 246 EELGKTAGK 254
>gi|428224789|ref|YP_007108886.1| farnesyl-diphosphate synthase [Geitlerinema sp. PCC 7407]
gi|427984690|gb|AFY65834.1| farnesyl-diphosphate synthase [Geitlerinema sp. PCC 7407]
Length = 315
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 119/251 (47%), Gaps = 19/251 (7%)
Query: 38 TPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVG 97
TP K+Y T+ + A L +V + P VYE MR+ + A + P LC+A CEL G
Sbjct: 21 TPFDLKAYLTARQVQVEAALDASVPMSYPETVYEAMRYSLLAGGKRLRPILCLATCELAG 80
Query: 98 GHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLP 157
G E A+ A AL ++H S IH++LP D + K T + + + +L D +L
Sbjct: 81 GTSEMAMPTACALEMIHTMSLIHDDLPAMDNDDY-RRGKLTNHKVYGEDVAILAGDGLLA 139
Query: 158 FGLELLASSDN--PAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNG 215
+ E +AS PA R+L+V+ ++ RA+G+ G+V GQ +L+ G
Sbjct: 140 YSFEYIASQTRNVPA----ERVLQVVTQVARAVGAAGLVGGQVVDLES----------EG 185
Query: 216 ITDVEMTYETY--KKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRL 273
+DV + Y K L GA+L G S + + L RY +G+ IV L
Sbjct: 186 RSDVSIETLNYIHTHKTAALLEASVVSGAVLAGASAELQQSLSRYAQNIGLAFQIVDDIL 245
Query: 274 GPTEEIEELKK 284
T EEL K
Sbjct: 246 DITATQEELGK 256
>gi|304316765|ref|YP_003851910.1| polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302778267|gb|ADL68826.1| Polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 293
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 101/200 (50%), Gaps = 11/200 (5%)
Query: 65 EPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLP 124
+P +Y+ MR+ VFA + P LC+++CELVGG R+ A+ A A+ +H S IH++LP
Sbjct: 26 KPEILYDAMRYSVFAGGKRLRPVLCISSCELVGGDRDDALPVACAIEFIHTYSLIHDDLP 85
Query: 125 LSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEM 184
D L + KPT + + +L DA+L +G E+L + N ILR E+
Sbjct: 86 AMDNDDL-RRGKPTNHKVYGEALAILAGDALLNYGFEVLIHHALDSA-NCQNILRATEEI 143
Query: 185 TRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAIL 244
A G G++ GQ +L IT+ E+ + + K G L GAI+
Sbjct: 144 AHAAGCHGMIGGQVVDLLSEN--------KNITEEELKF-MHDHKTGALIKASVVAGAIM 194
Query: 245 GGGSEKEIELLRRYGFYVGM 264
GG ++ I+ L Y Y+G+
Sbjct: 195 GGADDETIKKLSDYAEYIGL 214
>gi|427737891|ref|YP_007057435.1| geranylgeranyl pyrophosphate synthase [Rivularia sp. PCC 7116]
gi|427372932|gb|AFY56888.1| geranylgeranyl pyrophosphate synthase [Rivularia sp. PCC 7116]
Length = 311
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 116/234 (49%), Gaps = 15/234 (6%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L ++ V P ++YE MR+ + A + P LC+A CE+ GG+ E A+ A AL ++H
Sbjct: 36 LDNSIAVVYPEKIYEAMRYSLLAGGKRLRPILCLATCEMTGGNTEIAMPTACALEMIHTM 95
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGR 176
S IH++LP D + K T + + + +L D +L + E +A+ N +
Sbjct: 96 SLIHDDLPAMDNDDY-RRGKLTNHKVYGDDVAILAGDGLLAYAFEYVAT--NTKNVPPTQ 152
Query: 177 ILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETY--KKKEGRLH 234
IL+V+ + RA+G+ G+V GQ +L+ + G TDV + + K L
Sbjct: 153 ILQVISRLGRAVGAAGLVGGQVVDLE----------MEGKTDVSLETLNFIHNHKTAALL 202
Query: 235 ACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
CG IL G S ++I+ L+RY +G+ IV L T E+L K A K
Sbjct: 203 EASVVCGGILSGTSPEDIQKLQRYSQNIGLAFQIVDDILDITATQEQLGKTAGK 256
>gi|255080134|ref|XP_002503647.1| geranyl pyrophosphate synthase [Micromonas sp. RCC299]
gi|226518914|gb|ACO64905.1| geranyl pyrophosphate synthase [Micromonas sp. RCC299]
Length = 349
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 111/223 (49%), Gaps = 8/223 (3%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++E MR+ + A + P LC+AACEL+GG + A+ A AL ++H S IH++LP
Sbjct: 79 PERLHESMRYSLLAGGKRIRPCLCIAACELMGGTMDVAMPTACALEMIHTMSLIHDDLPS 138
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D + KPT + + +L DA+L E + + P + R LRV+V++
Sbjct: 139 MDNDDF-RRGKPTNHKVYGEEMAILAGDALLSHAFEYIG-RETPKSVPAERTLRVIVDVG 196
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
+ +GS+G+V GQ ++ + G VE + K G L GAIL
Sbjct: 197 KCVGSEGLVGGQVVDIMSEGAE------AGEVTVETLQYIHAHKTGALLEVSVTAGAILA 250
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
G E+++E L +Y +G+ +V L T+ E+L K A K
Sbjct: 251 GAKEEDVERLGKYAQLIGLAFQVVDDILDCTQTSEQLGKTAGK 293
>gi|308080718|ref|NP_001183942.1| putative geranylgeranyl pyrophosphate synthase 4 [Zea mays]
gi|148535925|gb|ABQ85649.1| putative geranylgeranyl pyrophosphate synthase 4 [Zea mays]
gi|413938171|gb|AFW72722.1| putative geranylgeranyl pyrophosphate synthase 4 [Zea mays]
Length = 343
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 125/236 (52%), Gaps = 20/236 (8%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVF------AAPVNMAPALCVAACELV 96
+ YWTS+ D+ + L A+ ++ P ++ MR+ V A P LCVAACEL+
Sbjct: 42 RRYWTSLIADVESELDAAMPMQPPESIHYAMRYAVLPGAGKEGAAKRAPPVLCVAACELL 101
Query: 97 GGHREQAIVAAAALHVMHAAS--FIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADA 154
G R A+ AAAAL ++HAAS +H++LP D + + +P+ + A+ + +L DA
Sbjct: 102 GAPRAAALPAAAALEMLHAASLVLVHDDLPCFD-AAPTRRGRPSTHAAYGTDMAVLAGDA 160
Query: 155 MLPFGL-ELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKL 213
+ P +++ + +P +LRV+ E+ RA+GS G+ GQ+ +L + + +
Sbjct: 161 LFPLAYTHVISHTPSPDPVPHAVLLRVLAELARAVGSTGMAAGQFLDLAGATALGEAEVM 220
Query: 214 NGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIV 269
+T KK G + C AACGA+LGG E LRRYG +G++ +V
Sbjct: 221 QVLT----------KKFGEMAECSAACGAMLGGAGPDEEAELRRYGRTIGVLYELV 266
>gi|334119738|ref|ZP_08493823.1| Farnesyltranstransferase [Microcoleus vaginatus FGP-2]
gi|333457900|gb|EGK86521.1| Farnesyltranstransferase [Microcoleus vaginatus FGP-2]
Length = 308
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 120/261 (45%), Gaps = 20/261 (7%)
Query: 34 MAMSTPNKN---KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCV 90
M S P + +Y E I L A+ V P ++YE MR+ + A + P LC+
Sbjct: 7 MGSSQPESSFDLSTYLVKRKEAIEVALDSALPVIYPEKIYEAMRYSLLAGGKRLRPILCL 66
Query: 91 AACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELL 150
A+CEL GG A+ A AL ++H S IH++LP D + K T + + + +L
Sbjct: 67 ASCELAGGTTSMAMPTACALEMIHTMSLIHDDLPAMDNDDY-RRGKLTNHKVYGEDIAIL 125
Query: 151 VADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDD 210
D +L + E +A+ ++L+ + + RA G+ G+V GQ +L+
Sbjct: 126 AGDGLLTYAFEFIATKTQNVPPQ--QVLQTIAHLARASGAAGLVGGQVVDLES------- 176
Query: 211 RKLNGITDVEMTYETY---KKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQG 267
G TDV + Y K L AC CGAIL G S +++ L R+ +G+
Sbjct: 177 ---EGKTDVSLETLNYIHAHKTGALLEAC-VVCGAILAGASAADLQRLSRFAQNIGLAFQ 232
Query: 268 IVSRRLGPTEEIEELKKLAFK 288
I+ L T EEL K A K
Sbjct: 233 IIDDILDITATQEELGKTAGK 253
>gi|411120370|ref|ZP_11392744.1| geranylgeranyl pyrophosphate synthase [Oscillatoriales
cyanobacterium JSC-12]
gi|410709751|gb|EKQ67264.1| geranylgeranyl pyrophosphate synthase [Oscillatoriales
cyanobacterium JSC-12]
Length = 308
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 119/247 (48%), Gaps = 15/247 (6%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
+Y + A L +++ + P ++YE MR+ + A + P LC+A CEL GG E A
Sbjct: 20 TYLAERQAQVEAALDRSLPIIYPEKIYEAMRYSLMAGGKRLRPILCLATCELTGGTVEMA 79
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ A AL ++H S IH++LP D + K T + F + +L D +L + E +
Sbjct: 80 MPTACALEMIHTMSLIHDDLPAMDNDDY-RRGKLTNHKVFGEDVAILAGDGLLAYAFEHV 138
Query: 164 ASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTY 223
A G R+L+V+ + RA+G+ G+V GQ +L+C G +DV +
Sbjct: 139 AI--ETKGVAPERLLKVVAMLGRAVGAAGLVGGQVVDLEC----------EGKSDVSLET 186
Query: 224 ETY--KKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEE 281
+ K L GA+L G S+++++ L RY +G+ IV L T EE
Sbjct: 187 LNFIHNHKTAALLEASVTSGAVLSGASDEDVQRLLRYAQNIGLAFQIVDDILDITATQEE 246
Query: 282 LKKLAFK 288
L K A K
Sbjct: 247 LGKTAGK 253
>gi|428300108|ref|YP_007138414.1| farnesyl-diphosphate synthase [Calothrix sp. PCC 6303]
gi|428236652|gb|AFZ02442.1| farnesyl-diphosphate synthase [Calothrix sp. PCC 6303]
Length = 308
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 120/251 (47%), Gaps = 21/251 (8%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K+Y + A L QAV ++ P +YE MR+ + A + P L +A CE+ GG E
Sbjct: 19 KAYLKDRQQLCEAALDQAVPMRYPETIYEAMRYSLMAGGKRLRPILTIATCEMTGGTIEM 78
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ A A+ ++H S IH++LP D + K T + + + +L D +L + E
Sbjct: 79 AMPTACAMEMVHTMSLIHDDLPAMDNDDY-RRGKLTNHKVYGEDIAILAGDGLLAYAFEY 137
Query: 163 LA--SSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVE 220
+ + D PA R+L+V+ + RA+G+ G+V GQ +L+ G TD
Sbjct: 138 IVEHTKDVPA----ERVLKVISRLGRAVGAAGLVGGQVVDLES----------EGKTDTS 183
Query: 221 MTYETY---KKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTE 277
+ + K L AC CG IL G SE +++ L RY +G+ I+ L T
Sbjct: 184 LETLNFIHNHKTAALLEAC-VVCGGILAGVSEDDLQRLSRYSQNIGLAFQIIDDILDITS 242
Query: 278 EIEELKKLAFK 288
E+L K A K
Sbjct: 243 TQEQLGKTAGK 253
>gi|427730885|ref|YP_007077122.1| geranylgeranyl pyrophosphate synthase [Nostoc sp. PCC 7524]
gi|427366804|gb|AFY49525.1| geranylgeranyl pyrophosphate synthase [Nostoc sp. PCC 7524]
Length = 309
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 121/248 (48%), Gaps = 21/248 (8%)
Query: 52 DIGAHLRQAVVVKE-----------PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHR 100
D+GA+L++ + E P ++YE MR+ + A + P LC+A CE++GG
Sbjct: 17 DLGAYLKERKKICEAALDKSMPVVYPEKIYESMRYSLLAGGKRLRPILCLATCEMMGGTI 76
Query: 101 EQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGL 160
E A+ A A+ ++H S IH++LP D + T + + + +L D +L +
Sbjct: 77 EMAMPTACAVEMIHTMSLIHDDLPAMDNDDY-RRGMLTNHKVYGEDIAILAGDGLLAYAF 135
Query: 161 ELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVE 220
EL+A+ P R+L+V+ + RA+G+ G+V GQ +L D + I+
Sbjct: 136 ELVATQ-TPESVTRERVLQVIARLGRALGAAGLVGGQVVDL-------DSEGKSDISLET 187
Query: 221 MTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
+ + K L AC CG IL G S ++++ L RY +G+ I+ L T E
Sbjct: 188 LNFIHNHKTAALLEAC-VVCGGILAGASSEDVQRLSRYAQNIGLAFQIIDDILDVTATQE 246
Query: 281 ELKKLAFK 288
+L K A K
Sbjct: 247 QLGKTAGK 254
>gi|428222583|ref|YP_007106753.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7502]
gi|427995923|gb|AFY74618.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7502]
Length = 313
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 115/244 (47%), Gaps = 11/244 (4%)
Query: 45 YWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAI 104
Y + + L ++ VK P +YE MR+ + A+ + P LC+A CEL GG ++
Sbjct: 26 YLATAKARVEKALEASIKVKYPETIYESMRYSLMASGKRLRPILCLATCELFGGDDSMSM 85
Query: 105 VAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA 164
A A+ ++H S IH++LP D + K T + + + +L DA+L + E +A
Sbjct: 86 PTACAMEMVHTMSLIHDDLPAMDNDDY-RRGKLTNHKVYGEDIAVLAGDALLAYAFEFIA 144
Query: 165 SSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYE 224
DN S RILRV+ + RA+ ++G+V GQ +L+ D T +E
Sbjct: 145 --DNTQNVPSDRILRVVSRLGRAVAAEGLVGGQVVDLESEGKPD--------TTLETLNF 194
Query: 225 TYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
++ K L G IL G ++I+ L Y +G+ I+ L T EEL K
Sbjct: 195 IHRHKTAALLEASVVSGGILAGADTEDIKRLTIYAQNIGLAFQIIDDILDITSTSEELGK 254
Query: 285 LAFK 288
A K
Sbjct: 255 TAGK 258
>gi|384252734|gb|EIE26210.1| Polyprenyl synthetase [Coccomyxa subellipsoidea C-169]
Length = 289
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 117/235 (49%), Gaps = 16/235 (6%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L ++V ++ P + E MR+ + A + P LC+AACE VGG+ QA+ A A+ ++H
Sbjct: 12 LDKSVPLQYPEIINESMRYSLLAGGKRVRPCLCLAACEAVGGNIAQAMPTACAMEMLHTM 71
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGR 176
S IH++LP D + KPT + + + +L DA+L E + G R
Sbjct: 72 SLIHDDLPSMDNDDF-RRGKPTNHKVYGEDVAILAGDALLCLAFEYICRETR--GVAPER 128
Query: 177 ILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITD---VEMTYETYKKKEGRL 233
I+RV+ E+ +A G++G+V GQ D K G+ + +E ++ K L
Sbjct: 129 IVRVVCEVGKATGAEGLVAGQIV----------DIKSEGMAEQVGLETLQYIHEHKTAAL 178
Query: 234 HACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
CGA++GG E ++E LR+Y +G+ +V L T+ E L K A K
Sbjct: 179 LEASVVCGALVGGAGEPDVERLRKYARCIGLAFQVVDDILDITQSSEVLGKTAGK 233
>gi|21592547|gb|AAM64496.1| putative geranylgeranyl pyrophosphate synthase GGPS3 [Arabidopsis
thaliana]
Length = 360
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 129/248 (52%), Gaps = 12/248 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K Y E + A L +V ++EP+ V E +R+ + A + P LC+A CELVGG
Sbjct: 67 KLYMIRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEAT 126
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE- 161
A+ AA A+ ++H +S IH++LP D L + KPT + + + +L DA+L E
Sbjct: 127 AMSAACAVEMIHTSSLIHDDLPCMDNADL-RRGKPTNHKVYGEDMAVLAGDALLALAFEH 185
Query: 162 -LLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVE 220
+ SS A R++R +VE+ RA+G+ G+V GQ +L + + D L + +
Sbjct: 186 MTVVSSGLVAPE---RMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIH 242
Query: 221 MTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
+ K L A G I+GGG+E+EIE LR+Y +G++ +V T+ E
Sbjct: 243 L------HKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDIPDVTKSTE 296
Query: 281 ELKKLAFK 288
EL K A K
Sbjct: 297 ELGKTAGK 304
>gi|159903660|ref|YP_001551004.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9211]
gi|159888836|gb|ABX09050.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9211]
Length = 300
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 112/225 (49%), Gaps = 12/225 (5%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
+ P ++ E MR+ + A + P LC+AACEL+ G E A+ A A+ ++H S IH++L
Sbjct: 33 ERPKQLREAMRYSLLAGGKRLRPILCLAACELIAGESETALPTAVAIEMIHTMSLIHDDL 92
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE 183
P D L + +PT + + +L DA+L E++ S G ++ R+++V+ E
Sbjct: 93 PSMDNDDL-RRGRPTNHKVYGDALAILAGDALLTRAFEMV--SLRSPGISAERLIKVVGE 149
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAI 243
++ G+ G+V GQ +L+C D D++ + K G L CGA+
Sbjct: 150 LSLVAGAPGLVGGQVADLECEGKD---------VDIDTLEYIHIHKTGALLKASVVCGAL 200
Query: 244 LGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
+GG + ++ LR Y +G+ I+ L T E L K A K
Sbjct: 201 IGGAKDDLLDALRTYAEAIGLAFQIIDDILDVTSSSEVLGKTAGK 245
>gi|124022642|ref|YP_001016949.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9303]
gi|123962928|gb|ABM77684.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9303]
Length = 306
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 122/254 (48%), Gaps = 12/254 (4%)
Query: 35 AMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACE 94
A+ST +Y + + L ++ + P ++ E MR+ + A + P LC+AACE
Sbjct: 10 AVSTFFDFPAYLAAAKASVEEALDDSLGPERPEQLREAMRYSLLAGGKRLRPILCIAACE 69
Query: 95 LVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADA 154
L GG QA+ A AL ++H S IH++LP D L + +PT + + +L DA
Sbjct: 70 LAGGEPTQALPTAVALEMIHTMSLIHDDLPAMDNDDL-RRGRPTNHKVYGDAVAILAGDA 128
Query: 155 MLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLN 214
+L E++A G R+L+V+ E++ G+ G+V GQ +L+C +
Sbjct: 129 LLTRSFEMVALRSK--GVAPERLLKVVGELSLVAGAPGLVGGQVVDLECEGKE------- 179
Query: 215 GITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLG 274
D+E + K G L + CGA++GG + I+ LR Y +G+ I+ L
Sbjct: 180 --VDLETLEFIHLHKTGALLSACVICGALIGGAEDDLIDALRIYARGIGLAFQIIDDILD 237
Query: 275 PTEEIEELKKLAFK 288
T + L K A K
Sbjct: 238 VTASSDVLGKTAGK 251
>gi|119509103|ref|ZP_01628254.1| Polyprenyl synthetase [Nodularia spumigena CCY9414]
gi|119466269|gb|EAW47155.1| Polyprenyl synthetase [Nodularia spumigena CCY9414]
Length = 309
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 14/234 (5%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L QA+ V P ++YE MR+ + A + P LC+AACE++GG A+ A A+ ++H
Sbjct: 33 LDQAIPVIYPEKIYESMRYSLLAGGKRLRPILCLAACEMIGGTISMAMPTACAMEMIHTM 92
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGR 176
S IH++LP D + + T + + + +L D +L + E +A+ P + R
Sbjct: 93 SLIHDDLPAMDNDDY-RRGRLTNHKVYGDDIAILAGDGLLAYAFEFVATQ-TPENVSRER 150
Query: 177 ILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETY--KKKEGRLH 234
+L+V+ + +A+G+ G+V GQ +L G TD+ + + K L
Sbjct: 151 VLQVIARLGKALGAAGLVGGQVVDLDS----------EGKTDISLETLNFIHNHKTAALL 200
Query: 235 ACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
CG I+ G S + ++ L RY +G+ I+ L T E+L K A K
Sbjct: 201 EASVVCGGIVAGASSENVQRLSRYSQNIGLAFQIIDDILDITATQEQLGKTAGK 254
>gi|15231877|ref|NP_188071.1| geranylgeranyl diphosphate synthase 9 [Arabidopsis thaliana]
gi|75274215|sp|Q9LUE1.1|GGPP9_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 9,
chloroplastic; Short=GGPP synthase 9; Short=GGPS9;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 9;
AltName: Full=Dimethylallyltranstransferase 9; AltName:
Full=Farnesyl diphosphate synthase 9; AltName:
Full=Farnesyltranstransferase 9; AltName:
Full=Geranyltranstransferase 9; Flags: Precursor
gi|9294375|dbj|BAB02385.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|34365549|gb|AAQ65086.1| At3g14530 [Arabidopsis thaliana]
gi|332642014|gb|AEE75535.1| geranylgeranyl diphosphate synthase 9 [Arabidopsis thaliana]
Length = 360
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 130/248 (52%), Gaps = 12/248 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K Y E + A L +V + +P+ + E +R+ + A + P LC+AACELVGG
Sbjct: 67 KLYMIRKAESVNAALDVSVPLLKPLTIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEAT 126
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE- 161
A+ AA A+ ++H +S IH++LP D L + KPT + + + +L DA+L E
Sbjct: 127 AMSAACAVEMIHTSSLIHDDLPCMDNADL-RRGKPTNHKVYGEDMAVLAGDALLALAFEH 185
Query: 162 -LLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVE 220
+ SS A +++R +VE+ RA+G+ G+V GQ +L + + D L + +
Sbjct: 186 MTVVSSGLVAPE---KMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIH 242
Query: 221 MTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
+ K L A G I+GGG+E+EIE LR+Y +G++ +V L T+ E
Sbjct: 243 L------HKTAALLEAAAVLGVIMGGGTEQEIEKLRKYARCIGLLFQVVDDILDVTKSTE 296
Query: 281 ELKKLAFK 288
EL K A K
Sbjct: 297 ELGKTAGK 304
>gi|428320077|ref|YP_007117959.1| Farnesyltranstransferase [Oscillatoria nigro-viridis PCC 7112]
gi|428243757|gb|AFZ09543.1| Farnesyltranstransferase [Oscillatoria nigro-viridis PCC 7112]
Length = 308
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 118/261 (45%), Gaps = 20/261 (7%)
Query: 34 MAMSTPNKN---KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCV 90
M S P + +Y E I L A+ V P +YE MR+ + A + P LC+
Sbjct: 7 MGSSQPESSFDLSAYLVKRKEAIEVALDSALPVIYPETIYEAMRYSLLAGGKRLRPILCL 66
Query: 91 AACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELL 150
A+CEL GG AI A AL ++H S IH++LP D + K T + + + +L
Sbjct: 67 ASCELAGGTTSMAIPTACALEMIHTMSLIHDDLPAMDNDDY-RRGKLTNHKVYGEDIAIL 125
Query: 151 VADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDD 210
D +L + E +A+ ++L+ + + RA G+ G+V GQ +L+
Sbjct: 126 AGDGLLTYAFEFIATKTQNVPPQ--QVLQTIAHLARASGAAGLVGGQVVDLES------- 176
Query: 211 RKLNGITDVEMTYETY---KKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQG 267
G TDV + Y K L AC CG IL G S +++ L R+ +G+
Sbjct: 177 ---EGKTDVSLETLNYIHAHKTGALLEAC-VVCGGILAGASTADLQRLSRFAQNIGLAFQ 232
Query: 268 IVSRRLGPTEEIEELKKLAFK 288
I+ L T EEL K A K
Sbjct: 233 IIDDILDITATQEELGKTAGK 253
>gi|41059107|gb|AAR99082.1| geranylgeranyl pyrophosphate synthase [Plectranthus barbatus]
Length = 359
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 131/280 (46%), Gaps = 24/280 (8%)
Query: 22 RPSLSY----RPMMVTMAMSTPNKNK---------SYWTSVHEDIGAHLRQAVVVKEPVE 68
RPS + RP + + NK +Y E + L AV +EP
Sbjct: 35 RPSWEFLIPTRPSATVAVLVKEDSNKFSLNNFDFEAYMKEKAERVNRALDAAVAQREPRW 94
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
++E MR+ + A + P LC+A+CELVGG A+ AA A ++H S IH++LP D
Sbjct: 95 IHESMRYSLLAGGKRVRPLLCIASCELVGGDERTAMPAACATEMIHTMSLIHDDLPCMDN 154
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
L + KPT + + N +L DA+L E +A++ G R++R +VE R +
Sbjct: 155 DDL-RRGKPTNHKVYGENVAVLAGDALLALAFEHVAAATE--GVAPERVVRAVVEFGRYI 211
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
GS+G+V GQ ++ + VE + K L GAILGG
Sbjct: 212 GSEGLVGGQVVDIHSEGLAE--------VGVEQLEYIHLHKTAALLEAAVVMGAILGGAD 263
Query: 249 EKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
++ +E LR++ +G++ +V L T+ EEL K A K
Sbjct: 264 DEAVEKLRKFARCIGLLFQVVDDILDVTKSSEELGKTAGK 303
>gi|390935023|ref|YP_006392528.1| polyprenyl synthetase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389570524|gb|AFK86929.1| Polyprenyl synthetase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 293
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 106/203 (52%), Gaps = 11/203 (5%)
Query: 62 VVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHE 121
+ P ++E MR+ VFA + P LC++ CELVGG++E A+ A A+ +H S IH+
Sbjct: 23 LTDRPEVLFEAMRYSVFAGGKRLRPVLCISTCELVGGNKEDALAVACAIEFIHTYSLIHD 82
Query: 122 NLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVM 181
+LP D L + KPT + + +L DA+L +G E+L + S IL+
Sbjct: 83 DLPAMDNDDL-RRGKPTNHKVYGEAIAILAGDALLNYGFEVLIQQ-ALNSSKSQNILKAA 140
Query: 182 VEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACG 241
E+ RA G +G++ GQ +L ++R++ G+ D++ ++ K G L G
Sbjct: 141 DEIARAAGCRGMIAGQVVDLLS-----ENREI-GVDDLKFMHD---HKTGALIRASILAG 191
Query: 242 AILGGGSEKEIELLRRYGFYVGM 264
AI+GG + ++ L Y Y+G
Sbjct: 192 AIMGGADDDTLKKLSSYAEYLGF 214
>gi|62320250|dbj|BAD94520.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 360
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 135/252 (53%), Gaps = 20/252 (7%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
KSY E + L +V ++P+ + E +R+ + A + P LC+AACELVGG
Sbjct: 67 KSYMIRKAESVSMALNVSVPPQDPLAIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEAT 126
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE- 161
A+ AA A+ ++H +S IH++LP D L + KPT + F + +L DA+L E
Sbjct: 127 AMSAACAVEMIHTSSLIHDDLPCMDDADL-RRGKPTNHKVFGEHMAVLAGDALLALAFEH 185
Query: 162 -LLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVE 220
+ SS A R++R + E+ +A+G++G+V GQ ++L CSQ G+ +
Sbjct: 186 MTVVSSGLVAPE---RMIRSVTELAKAIGTKGLVAGQVSDL-CSQ---------GLNPYD 232
Query: 221 MTYETYK----KKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPT 276
+ E + K L A GAI+GGG+E+EI+ LR+YG +G++ +V + T
Sbjct: 233 VGLERLEFIHLHKTAALLEAAAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVT 292
Query: 277 EEIEELKKLAFK 288
E EEL K A K
Sbjct: 293 ESTEELGKTAGK 304
>gi|15232010|ref|NP_189747.1| geranylgeranyl diphosphate synthase 12 [Arabidopsis thaliana]
gi|75263903|sp|Q9LHR4.1|GGPPC_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 12,
chloroplastic; Short=GGPP synthase 12; Short=GGPS12;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 12;
AltName: Full=Dimethylallyltranstransferase 12; AltName:
Full=Farnesyl diphosphate synthase 12; AltName:
Full=Farnesyltranstransferase 12; AltName:
Full=Geranyltranstransferase 12; Flags: Precursor
gi|9294084|dbj|BAB01936.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|50253560|gb|AAT71982.1| At3g32040 [Arabidopsis thaliana]
gi|332644160|gb|AEE77681.1| geranylgeranyl diphosphate synthase 12 [Arabidopsis thaliana]
Length = 360
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 135/252 (53%), Gaps = 20/252 (7%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
KSY E + L +V ++P+ + E +R+ + A + P LC+AACELVGG
Sbjct: 67 KSYMIRKAESVSMALNVSVPPQDPLAIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEAT 126
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE- 161
A+ AA A+ ++H +S IH++LP D L + KPT + F + +L DA+L E
Sbjct: 127 AMSAACAVEMIHTSSLIHDDLPCMDDADL-RRGKPTNHKVFGEHMAVLAGDALLALAFEH 185
Query: 162 -LLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVE 220
+ SS A R++R + E+ +A+G++G+V GQ ++L CSQ G+ +
Sbjct: 186 MTVVSSGLVAPE---RMIRSVTELAKAIGTKGLVAGQVSDL-CSQ---------GLNPYD 232
Query: 221 MTYETYK----KKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPT 276
+ E + K L A GAI+GGG+E+EI+ LR+YG +G++ +V + T
Sbjct: 233 VGLERLEFIHLHKTAALLEAAAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVT 292
Query: 277 EEIEELKKLAFK 288
E EEL K A K
Sbjct: 293 ESTEELGKTAGK 304
>gi|38455333|gb|AAR20832.1| geranylgeranyl diphosphate synthase [Taxus x media]
Length = 180
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 100/186 (53%), Gaps = 10/186 (5%)
Query: 73 MRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLI 132
MR+ + A + PALC+AACELVGG ++ A+ A A+ ++H S IH++LP D
Sbjct: 1 MRYSLLAGGKRVRPALCIAACELVGGSQDLAMPTACAMEMIHTMSLIHDDLPCMDNDDF- 59
Query: 133 PKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQG 192
+ KPT + F +T +L DA+L F E +A + + S R LRV+ E+ + + SQG
Sbjct: 60 RRGKPTNHKVFGEDTAVLAGDALLSFAFEHIAVATSKT-VPSDRTLRVISELGKTISSQG 118
Query: 193 VVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEI 252
+V GQ ++ S+ D + D++ + K L C G ILGG +E EI
Sbjct: 119 LVGGQVVDIT-SEGDAN-------VDLKTLEWIHIHKTAVLLECSVVNGGILGGATEDEI 170
Query: 253 ELLRRY 258
+RRY
Sbjct: 171 ARIRRY 176
>gi|427706110|ref|YP_007048487.1| farnesyl-diphosphate synthase [Nostoc sp. PCC 7107]
gi|427358615|gb|AFY41337.1| farnesyl-diphosphate synthase [Nostoc sp. PCC 7107]
Length = 309
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 112/226 (49%), Gaps = 16/226 (7%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P +YE MR+ + A + P LC+A CE++GG E A+ A A+ ++H S IH++LP
Sbjct: 42 PETIYESMRYSLLAGGKRVRPILCLATCEMMGGTIEMAMPTACAVEMIHTMSLIHDDLPA 101
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D + + T + + + +L D +L F EL+A+ P ++L+V+ +
Sbjct: 102 MDNDDY-RRGRLTNHKVYGDDIAILAGDGLLAFAFELVATQ-TPENVPRDKVLQVIARLG 159
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETY---KKKEGRLHACGAACGA 242
RA+G+ G+V GQ +L+ G +D+ + + K L AC CG
Sbjct: 160 RALGAAGLVGGQVVDLES----------EGKSDISLETLNFIHNHKTAALLEAC-VVCGG 208
Query: 243 ILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
IL G S ++++ L RY +G+ I+ L T E+L K A K
Sbjct: 209 ILAGASSEDVQRLTRYSQNIGLAFQIIDDILDVTATQEQLGKTAGK 254
>gi|443311531|ref|ZP_21041158.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 7509]
gi|442778410|gb|ELR88676.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 7509]
Length = 308
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 126/260 (48%), Gaps = 16/260 (6%)
Query: 32 VTMAMSTPNKNKSYWTSVHED-IGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCV 90
+ M T N S + H+ + A L +A+ V P ++YE MR+ + A + P LC+
Sbjct: 7 LQMTSQTAQFNLSAYLLEHQSLVEAALDRAISVVYPEKIYEAMRYSLLAGGKRLRPILCL 66
Query: 91 AACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELL 150
A C++ GG E A+ A AL ++H S IH++LP D + K T + + + +L
Sbjct: 67 ATCQMAGGTLETAMPTACALEMIHTMSLIHDDLPAMDNDDY-RRGKLTNHKVYGEDIAIL 125
Query: 151 VADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDD 210
D +L + E +A+ N + ++L+V+ ++ RA+G+ G+V GQ +L+
Sbjct: 126 AGDGLLAYAFEFVAT--NTFNVPAEQVLKVIAKLGRAVGAAGLVGGQVVDLES------- 176
Query: 211 RKLNGITDVEMTYETY--KKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGI 268
G TDV + + K L CG IL G SE++++ L + +G+ I
Sbjct: 177 ---EGKTDVSLETLNFIHNHKTAALLEASVVCGGILAGMSEEDLQRLSGFSQNIGLAFQI 233
Query: 269 VSRRLGPTEEIEELKKLAFK 288
+ L T E+L K A K
Sbjct: 234 IDDVLDITSTQEQLGKTAGK 253
>gi|67924905|ref|ZP_00518297.1| Polyprenyl synthetase [Crocosphaera watsonii WH 8501]
gi|67853239|gb|EAM48606.1| Polyprenyl synthetase [Crocosphaera watsonii WH 8501]
Length = 309
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 131/286 (45%), Gaps = 34/286 (11%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
SY + + A L Q++ + P ++YE MR+ + A + P LC+ CEL+GG E +
Sbjct: 21 SYLKEKKQLVEAALDQSLHITRPEKIYEAMRYSLLAGGKRLRPILCLTTCELMGGTVEMS 80
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ A AL ++H S IH++LP D + K T + + + +L DA+L + E +
Sbjct: 81 LPTACALEMIHTMSLIHDDLPAMDNDDY-RRGKLTNHKVYGEDIAILAGDALLSYAFEYV 139
Query: 164 ASS----DNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDV 219
A+ D P ++ V+ + R +G+ G+V GQ +L+ G TDV
Sbjct: 140 ATQTCNVDFP------NLIDVIARLGRTVGAAGLVGGQVLDLES----------EGRTDV 183
Query: 220 EMTYETYK----KKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGP 275
T +T K K G L GAIL G ++IE L RY +G+ I+ L
Sbjct: 184 --TVDTLKFIHIHKTGALLETSVVSGAILAGAKPEDIERLSRYAQNIGLAFQIIDDVLDV 241
Query: 276 TEEIEELKKLAFKLREVNSFN-------DENAEVIFSLVDDNITHV 314
T EEL K A K +E+ + +L+DD I +
Sbjct: 242 TASSEELGKTAGKDERAQKATYPSLWGLEESQKQAQALIDDAIAQL 287
>gi|416403979|ref|ZP_11687631.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Crocosphaera
watsonii WH 0003]
gi|357261577|gb|EHJ10825.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Crocosphaera
watsonii WH 0003]
Length = 307
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 131/286 (45%), Gaps = 34/286 (11%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
SY + + A L Q++ + P ++YE MR+ + A + P LC+ CEL+GG E +
Sbjct: 19 SYLKEKKQLVEAALDQSLHITRPEKIYEAMRYSLLAGGKRLRPILCLTTCELMGGTVEMS 78
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ A AL ++H S IH++LP D + K T + + + +L DA+L + E +
Sbjct: 79 LPTACALEMIHTMSLIHDDLPAMDNDDY-RRGKLTNHKVYGEDIAILAGDALLSYAFEYV 137
Query: 164 ASS----DNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDV 219
A+ D P ++ V+ + R +G+ G+V GQ +L+ G TDV
Sbjct: 138 ATQTCNVDFP------NLIDVIARLGRTVGAAGLVGGQVLDLES----------EGRTDV 181
Query: 220 EMTYETYK----KKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGP 275
T +T K K G L GAIL G ++IE L RY +G+ I+ L
Sbjct: 182 --TVDTLKFIHIHKTGALLETSVVSGAILAGAKPEDIERLSRYAQNIGLAFQIIDDVLDV 239
Query: 276 TEEIEELKKLAFKLREVNSFN-------DENAEVIFSLVDDNITHV 314
T EEL K A K +E+ + +L+DD I +
Sbjct: 240 TASSEELGKTAGKDERAQKATYPSLWGLEESQKQAQALIDDAIAQL 285
>gi|116748856|ref|YP_845543.1| polyprenyl synthetase [Syntrophobacter fumaroxidans MPOB]
gi|116697920|gb|ABK17108.1| farnesyl-diphosphate synthase [Syntrophobacter fumaroxidans MPOB]
Length = 296
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 106/216 (49%), Gaps = 12/216 (5%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
V E R+ +FA + P LC+AA E+ GG RE A+ AA AL ++H S IH++LP D
Sbjct: 34 VLEAARYSLFAGGKRLRPILCLAAAEVAGGSREAAMPAACALEMIHTYSLIHDDLPAMDN 93
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
+ KPT + F +L DA+L + ++ D +IL V+ + RA
Sbjct: 94 DDF-RRGKPTNHKVFGEAIAVLAGDALLTEAFDFVSKMDGDIPPR--KILAVVATLVRAS 150
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
G +G++ GQ +L+C N D+ + K G L + GA+LGGGS
Sbjct: 151 GYRGMIGGQVIDLECE---------NRTVDLATVEYMHIHKTGALLSASLEVGALLGGGS 201
Query: 249 EKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
+ ++ L+RYG ++G+ I L + E+ K
Sbjct: 202 DAQVSSLKRYGHHLGLAFQITDDLLDVEGDAREMGK 237
>gi|443328518|ref|ZP_21057114.1| geranylgeranyl pyrophosphate synthase [Xenococcus sp. PCC 7305]
gi|442791817|gb|ELS01308.1| geranylgeranyl pyrophosphate synthase [Xenococcus sp. PCC 7305]
Length = 310
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 117/237 (49%), Gaps = 21/237 (8%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L Q++ + P ++YE MR+ + A + P LC+A C L GG E A+ A AL ++H
Sbjct: 35 LDQSLAIGIPEKIYESMRYSLLAGGKRLRPILCLATCRLTGGSTEMAMPTACALEMIHTM 94
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLAS-SDNPAGNNSG 175
S IH++LP D + K T + + + +L D +L + E +A+ +DN A N
Sbjct: 95 SLIHDDLPAMDNDDY-RRGKLTNHKVYGEDVAILAGDGLLAYAFEYVANKTDNVAPEN-- 151
Query: 176 RILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYET----YKKKEG 231
I++V+ + +G++G+V GQ +L+ G TD+ T ET + K G
Sbjct: 152 -IIKVIARLGNTVGAEGLVGGQVLDLES----------EGKTDI--TAETLSFIHTHKTG 198
Query: 232 RLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
L GAIL G S +EI L +Y +G+ I+ L T E+L K A K
Sbjct: 199 ALLETSVVTGAILAGASAEEIIKLTKYSQNIGLAFQIIDDILDITATDEQLGKTAGK 255
>gi|218437608|ref|YP_002375937.1| polyprenyl synthetase [Cyanothece sp. PCC 7424]
gi|218170336|gb|ACK69069.1| Polyprenyl synthetase [Cyanothece sp. PCC 7424]
Length = 307
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 121/259 (46%), Gaps = 16/259 (6%)
Query: 31 MVTMAMSTPNKNKS-----YWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMA 85
MVT P + S Y + + L ++ + +P ++YE MR+ + A +
Sbjct: 1 MVTTDEKIPQQRTSFDLTSYLKHQKDLVDQALESSLPITKPEKIYEAMRYSLLAGGKRLR 60
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
P LC+A C+L+GG E A+ A AL ++H S IH++LP D + K T + +
Sbjct: 61 PILCLATCDLMGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDY-RRGKLTNHKVYGE 119
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
+ +L D +L + E +A+ +IL V+ + R +G+ G+V GQ +L+
Sbjct: 120 DIAILAGDGLLSYAFEYVATQTRNVPPE--QILEVIARLGRTVGAAGLVGGQVLDLESEG 177
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
D IT +T+ + K G L GAIL G + +E+E L RY +G+
Sbjct: 178 KSD-------ITPETLTF-IHTHKTGALLETSVVSGAILAGATREEVEKLSRYAQNIGLA 229
Query: 266 QGIVSRRLGPTEEIEELKK 284
IV L T EEL K
Sbjct: 230 FQIVDDILDITATQEELGK 248
>gi|116073079|ref|ZP_01470341.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9916]
gi|116068384|gb|EAU74136.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9916]
Length = 317
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 121/246 (49%), Gaps = 12/246 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K+Y S + + A L ++ + P + E MR+ + A + P LC+AACEL GG
Sbjct: 23 KAYLGSQKQLVEAALDDSLGPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGDPAL 82
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ A AL ++H S IH++LP D L + +PT + + +L DA+L E+
Sbjct: 83 AMPTAVALEMIHTMSLIHDDLPAMDNDDL-RRGRPTNHKVYGDAVAILAGDALLTRAFEM 141
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+ S +P G + R+L+V+ E++ G+ G+V GQ +L+C D D L
Sbjct: 142 V-SLRSP-GVPAERLLKVVAELSLVAGAPGLVGGQVVDLECEGKDVDLDTLE-------- 191
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
Y K L AC GA++GG E +++ LR Y +G+ IV L T + L
Sbjct: 192 YIHLHKTGALLKAC-VITGALIGGADEAQLDSLRTYARGIGLAFQIVDDILDVTASSDVL 250
Query: 283 KKLAFK 288
K A K
Sbjct: 251 GKTAGK 256
>gi|33863380|ref|NP_894940.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9313]
gi|33640829|emb|CAE21284.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9313]
Length = 306
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 122/254 (48%), Gaps = 12/254 (4%)
Query: 35 AMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACE 94
A+ST +Y + + L ++ + P ++ E MR+ + A + P LC+AACE
Sbjct: 10 AVSTFFDFPAYLAAAKASVEEALDDSLGPERPEQLREAMRYSLLAGGKRLRPILCLAACE 69
Query: 95 LVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADA 154
L GG +A+ A AL ++H S IH++LP D L + +PT + + +L DA
Sbjct: 70 LAGGEPAEALPTAVALEMIHTMSLIHDDLPAMDNDDL-RRGRPTNHKVYGDAVAILAGDA 128
Query: 155 MLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLN 214
+L E++A G R+L+V+ E++ G+ G+V GQ +L+C +
Sbjct: 129 LLTRSFEMVAL--RSPGVPPERLLKVVGELSLVAGAPGLVGGQVVDLECEGKE------- 179
Query: 215 GITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLG 274
D+E + K G L + CGA++GG + I+ LR Y +G+ I+ L
Sbjct: 180 --VDLETLEFIHLHKTGALLSACVICGALIGGAEDDLIDALRIYARGIGLAFQIIDDILD 237
Query: 275 PTEEIEELKKLAFK 288
T + L K A K
Sbjct: 238 VTASSDVLGKTAGK 251
>gi|354569185|ref|ZP_08988342.1| Farnesyltranstransferase [Fischerella sp. JSC-11]
gi|353538935|gb|EHC08440.1| Farnesyltranstransferase [Fischerella sp. JSC-11]
Length = 308
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 115/236 (48%), Gaps = 19/236 (8%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L QA+ V+ P ++YE MR+ + A + P +C+A CE+ GG+ A+ A AL ++H
Sbjct: 33 LEQAISVRYPEKIYEAMRYSLLAGGKRLRPIICLATCEMTGGNIAIAMPTACALEMIHTM 92
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA--SSDNPAGNNS 174
S IH++LP D + K T + + + +L D +L + E +A + D PA
Sbjct: 93 SLIHDDLPAMDNDDY-RRGKLTNHKVYGEDIAILAGDGLLAYAFEYVAVNTEDVPA---- 147
Query: 175 GRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDV--EMTYETYKKKEGR 232
R+LRV+ + RA+G+ G+V GQ +L+ G +D+ E + K G
Sbjct: 148 ERLLRVVAHLGRAVGAAGLVGGQVLDLES----------EGKSDICSETLDFIHHHKTGA 197
Query: 233 LHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
L CG IL G SE ++ L Y +G+ I+ L T E+L K K
Sbjct: 198 LLEASVVCGGILAGTSEDNLKRLSCYAKNIGLAFQIIDDILDITSTQEQLGKTVGK 253
>gi|390440821|ref|ZP_10229021.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis sp.
T1-4]
gi|389835867|emb|CCI33147.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis sp.
T1-4]
Length = 309
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 120/255 (47%), Gaps = 20/255 (7%)
Query: 40 NKNKSYWTSVHED---IGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELV 96
NKN S + + E + + L ++V+ P ++YE MR+ + A + P LC+A CEL+
Sbjct: 14 NKNFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELM 73
Query: 97 GGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAML 156
GG E A+ A AL ++H S IH++LP D + K T + F + +L D +L
Sbjct: 74 GGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDY-RRGKLTNHKVFGEDIAILAGDGLL 132
Query: 157 PFGLELLASSDN---PAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKL 213
+ E +A+ P +IL V+ + R +G+ G+V GQ +L+ + D +
Sbjct: 133 AYAFEYVATQTRNVPPL-----QILEVIARLGRTVGAAGLVGGQVLDLESAGKPDISAET 187
Query: 214 NGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRL 273
G + K G L GA+L G ++I L RY +G+ I+ L
Sbjct: 188 LGF--------IHTHKTGSLLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVL 239
Query: 274 GPTEEIEELKKLAFK 288
T EEL K A K
Sbjct: 240 DITATNEELGKTAGK 254
>gi|442743257|gb|AFC88470.2| geranylgeranyl pyrophosphate synthase 4 [Nicotiana tabacum]
Length = 372
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 124/246 (50%), Gaps = 11/246 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
KSY + + L AV ++EP++ +E MR+ + + + P LC+AACELVGG
Sbjct: 82 KSYMHQKIKSVNRALDAAVPLREPLKFHEAMRYSLLSEGKRVCPVLCIAACELVGGQEST 141
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ AA + ++HA +H++LP D +L + K + + F N +L +++ E
Sbjct: 142 AMPAACGMEMVHAMCMMHDDLPCMDNDTL-RRGKLSNHKVFGENVTVLAGYSLVALAFEH 200
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+A++ G + ++R + E+ R +G +G GQ +L D G+ ++E
Sbjct: 201 MATATQ--GVHPKTMVRAIGELARLIGPEGAAAGQVLDLLSGGKSD-----TGLEELEY- 252
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
++ K A GA++GG + +EI LR++ +G++ +V L T+ E+L
Sbjct: 253 --IHRHKTADFAEAAAIIGAMVGGATNEEINRLRKFSQCIGLLFQVVDDILDVTKSSEQL 310
Query: 283 KKLAFK 288
K A K
Sbjct: 311 GKTAGK 316
>gi|332706101|ref|ZP_08426173.1| farnesyl-diphosphate synthase [Moorea producens 3L]
gi|332355193|gb|EGJ34661.1| farnesyl-diphosphate synthase [Moorea producens 3L]
Length = 309
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 30 MMVTMAMSTPNKNK------SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVN 83
M+ T TP + +Y I + L QA+ EP ++YE MR+ + A
Sbjct: 1 MVATEGRPTPKRESPSLDLLTYLKERKALIESALDQALPRMEPDKIYEAMRYSLLAGGKR 60
Query: 84 MAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAF 143
+ P LC+A CEL+GG E A+ + AL ++H S IH++LP D + K T + F
Sbjct: 61 LRPILCLATCELMGGTVEMAMPTSCALEMIHTMSLIHDDLPAMDNDDY-RRGKLTNHKVF 119
Query: 144 KPNTELLVADAMLPFGLELLASSDN--PAGNNSGRILRVMVEMTRAMGSQGVVEGQYNEL 201
+ +L D +L + E A+ PA ++L+V+ + +A+G+ G+V GQ +L
Sbjct: 120 GEDIAILAGDGLLAYAFEYAAAQTKNVPA----PQVLQVVAWLAKAVGASGLVGGQVLDL 175
Query: 202 QCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFY 261
+ D I + +++ K L AC CG IL G + ++ L +Y
Sbjct: 176 ESEGKSD-------IKEETLSFIHTHKTGALLEAC-VVCGGILAGATAANLQRLSKYAQN 227
Query: 262 VGMIQGIVSRRLGPTEEIEELKKLAFK 288
+G+ IV L T EEL K A K
Sbjct: 228 IGLAFQIVDDILDITATQEELGKTAGK 254
>gi|428206430|ref|YP_007090783.1| farnesyl-diphosphate synthase [Chroococcidiopsis thermalis PCC
7203]
gi|428008351|gb|AFY86914.1| farnesyl-diphosphate synthase [Chroococcidiopsis thermalis PCC
7203]
Length = 308
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 117/250 (46%), Gaps = 11/250 (4%)
Query: 39 PNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGG 98
P +Y ++ A L +++V P ++YE MR+ + A + P LC+A CE+ GG
Sbjct: 15 PFDLSAYLKQRQVEVEAALESSIIVTYPEKIYEAMRYSLLAGGKRLRPILCLATCEMAGG 74
Query: 99 HREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPF 158
E A+ A AL ++H S IH++LP D + + T + + + +L D +L +
Sbjct: 75 TVEMAMPTACALEMIHTMSLIHDDLPAMDNDDY-RRGRLTNHKVYGDDIAILAGDGLLAY 133
Query: 159 GLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITD 218
E +A+ R+LR + ++ A+G+ G+V GQ +L+ D +T
Sbjct: 134 AFEYIATQTKNVPPE--RVLRAIAQLGHAVGAAGLVGGQVVDLESEGKSD-------VTA 184
Query: 219 VEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEE 278
+ + K L AC G +L G E +++ L RY +G+ I+ L T
Sbjct: 185 DTLHFIHTHKTAALLEAC-VVSGGVLAGLEESDLQRLSRYAQNIGLAFQIIDDILDVTAT 243
Query: 279 IEELKKLAFK 288
EEL K A K
Sbjct: 244 AEELGKTAGK 253
>gi|407957152|dbj|BAM50392.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
Length = 319
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 125/279 (44%), Gaps = 17/279 (6%)
Query: 10 LPAHVAPRRNHSRPSLSYRPMMVTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEV 69
LPA PR S S MV T Y + A L ++ + P ++
Sbjct: 3 LPAIAQPRYLVSSDS------MVAQQTRTDFDLAQYLQVKKGVVEAALDSSLAIARPEKI 56
Query: 70 YEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRT 129
YE MR+ + A + P LC+ ACEL GG A+ A AL ++H S IH++LP D
Sbjct: 57 YEAMRYSLLAGGKRLRPILCITACELCGGDEALALPTACALEMIHTMSLIHDDLPSMDND 116
Query: 130 SLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMG 189
+ KPT + + + +L D +L + E + + A + +L+V+ + R +G
Sbjct: 117 DF-RRGKPTNHKVYGEDIAILAGDGLLAYAFEYVVTHTPQADPQA--LLQVIARLGRTVG 173
Query: 190 SQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSE 249
+ G+V GQ +L+ D IT +T+ + K G L GAIL G +
Sbjct: 174 AAGLVGGQVLDLESEGRTD-------ITPETLTF-IHTHKTGALLEASVLTGAILAGATG 225
Query: 250 KEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
++ + L RY +G+ +V L T EEL K A K
Sbjct: 226 EQQQRLARYAQNIGLAFQVVDDILDITATQEELGKTAGK 264
>gi|333897019|ref|YP_004470893.1| polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333112284|gb|AEF17221.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 293
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 101/199 (50%), Gaps = 11/199 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++E M++ VFA + P LC++ACELVGG++E A+ A A+ +H S IH++LP
Sbjct: 27 PEVLFEAMKYSVFAGGKRLRPVLCISACELVGGNKEDALPVACAIEFIHTYSLIHDDLPA 86
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D L + KPT + + +L DA+L +G E+L N S IL+ E+
Sbjct: 87 MDNDDL-RRGKPTNHKVYGEAIAILAGDALLNYGFEVLIQQ-ALNSNKSQNILKAADEIA 144
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
RA G +G++ GQ +L + K G D++ ++ K G L GAI+G
Sbjct: 145 RAAGCRGMIAGQVVDLLS------ENKEIGEYDLKFMHD---HKTGALIKASILAGAIIG 195
Query: 246 GGSEKEIELLRRYGFYVGM 264
G ++ L Y Y+G
Sbjct: 196 GADAATLKKLSSYAEYLGF 214
>gi|125525184|gb|EAY73298.1| hypothetical protein OsI_01173 [Oryza sativa Indica Group]
Length = 314
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 122/252 (48%), Gaps = 12/252 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
+ Y ++ + + L +A+ P + E MR+ V A + P L +AACELVGG
Sbjct: 23 QRYLSARADAVNDALDRAMPRGFPERLCESMRYSVLAGGKRVRPVLALAACELVGGDAAA 82
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A A A+ ++H S IH+++P D +L + +P+ + AF T LL DA+ E
Sbjct: 83 ATPVACAVEMIHTMSLIHDDMPCMDDDAL-RRGRPSNHVAFGEFTALLAGDALHALAFEH 141
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGI-TDVEM 221
+A G + R LR + E+ A G+ GV GQ D++ G+ + M
Sbjct: 142 VARGCGDHGVPADRTLRAVAELGSASGTGGVAAGQVA----------DKESEGLPVSLAM 191
Query: 222 TYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEE 281
+ K RL A GAI+GGG++ E+E +RRY VG++ +V L T E+
Sbjct: 192 LEYIHVHKTARLLEAAAVSGAIVGGGADAEVERVRRYARCVGLLFQVVDDVLDMTSTSEQ 251
Query: 282 LKKLAFKLREVN 293
L K A K E +
Sbjct: 252 LGKTAGKDVEAD 263
>gi|86605096|ref|YP_473859.1| geranylgeranyl diphosphate synthase [Synechococcus sp. JA-3-3Ab]
gi|86553638|gb|ABC98596.1| geranylgeranyl diphosphate synthase [Synechococcus sp. JA-3-3Ab]
Length = 297
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 112/245 (45%), Gaps = 12/245 (4%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
+Y + + + L A+V P +YE MR+ + A + P LC+AACEL GG EQA
Sbjct: 10 TYLSQRQQQVEEALSAALVPAYPERIYEAMRYSLLAGGKRLRPILCLAACELAGGSVEQA 69
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ A AL ++H S IH++LP D + KPT + F + +L DA+L + E +
Sbjct: 70 MPTACALEMIHTMSLIHDDLPAMDNDDF-RRGKPTNHKVFGEDIAILAGDALLAYAFEHI 128
Query: 164 ASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTY 223
AS G +L+V+ + A+ + G+V GQ +L+ +E
Sbjct: 129 ASQTR--GVPPQLVLQVIARIGHAVAATGLVGGQVVDLESE---------GKAISLETLE 177
Query: 224 ETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELK 283
+ K G L G IL G E+ + L Y +G+ IV L T E+L
Sbjct: 178 YIHSHKTGALLEASVVSGGILAGADEELLARLSHYARDIGLAFQIVDDILDVTATSEQLG 237
Query: 284 KLAFK 288
K A K
Sbjct: 238 KTAGK 242
>gi|167037514|ref|YP_001665092.1| polyprenyl synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|320115928|ref|YP_004186087.1| polyprenyl synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|326390206|ref|ZP_08211767.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200]
gi|392941055|ref|ZP_10306699.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
siderophilus SR4]
gi|166856348|gb|ABY94756.1| Polyprenyl synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319929019|gb|ADV79704.1| Polyprenyl synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|325993854|gb|EGD52285.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200]
gi|392292805|gb|EIW01249.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
siderophilus SR4]
Length = 294
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 116/247 (46%), Gaps = 21/247 (8%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
++P +YE MR+ VFA + P LC+++CEL+GG ++A+ A A+ ++H S IH++L
Sbjct: 25 EKPEIIYEAMRYSVFAGGKRLRPVLCLSSCELLGGDIKKALPVACAIELIHTYSLIHDDL 84
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE 183
P D L + KPT + + +L D +L G E+L + RIL+ E
Sbjct: 85 PAMDNDDL-RRGKPTNHKVYGEAIAILAGDGLLNLGYEVLVRHALEHPEDYERILKATNE 143
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYK----KKEGRLHACGAA 239
+ A G +G++ GQ ++ SQ + E+TYE K K G L
Sbjct: 144 IATASGCKGIIGGQVVDI-LSQ------------NTELTYEELKFMHEHKTGALIEASVC 190
Query: 240 CGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVNSFNDEN 299
GA + G +E+EI LR Y +G I L E E+L K +E F N
Sbjct: 191 AGAYIAGATEEEIHALREYARLIGFAFQIKDDILDVIGEEEKLGKKVGSDKEKGKFTFVN 250
Query: 300 AEVIFSL 306
IF L
Sbjct: 251 ---IFGL 254
>gi|297719791|ref|NP_001172257.1| Os01g0248701 [Oryza sativa Japonica Group]
gi|5042458|gb|AAD38295.1|AC007789_21 putative geranylgeranyl pyrophosphate synthase [Oryza sativa
Japonica Group]
gi|11320851|dbj|BAB18334.1| putative geranylgeranyl pyrophosphate synthase [Oryza sativa
Japonica Group]
gi|255673061|dbj|BAH90987.1| Os01g0248701 [Oryza sativa Japonica Group]
Length = 376
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 112/229 (48%), Gaps = 12/229 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P + E MR+ V A + P L +AACELVGG A A A+ ++H S IH+++P
Sbjct: 108 PERLCESMRYSVLAGGKRVRPVLALAACELVGGDAAAATPVACAVEMIHTMSLIHDDMPC 167
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D +L + +P+ + AF T LL DA+ E +A G + R LR + E+
Sbjct: 168 MDDDAL-RRGRPSNHVAFGEFTALLAGDALHALAFEHVARGCGDHGVPADRTLRAVAELG 226
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGI-TDVEMTYETYKKKEGRLHACGAACGAIL 244
A G+ GV GQ D++ G+ + M + K RL A GAI+
Sbjct: 227 SASGTGGVAAGQVA----------DKESEGLPVSLAMLEYIHVHKTARLLEAAAVSGAIV 276
Query: 245 GGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVN 293
GGG++ E+E +RRY VG++ +V L T E+L K A K E +
Sbjct: 277 GGGADAEVERVRRYARCVGLLFQVVDDVLDMTSTSEQLGKTAGKDVEAD 325
>gi|425467096|ref|ZP_18846380.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9809]
gi|389830220|emb|CCI27968.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9809]
Length = 326
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 125/272 (45%), Gaps = 24/272 (8%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L ++V+ P ++YE MR+ + A + P LC+A CEL+GG E A+ A AL ++H
Sbjct: 51 LDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGSLEMALPTACALEMIHTM 110
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDN---PAGNN 173
S IH++LP D + K T + F + +L D +L + E +A+ P
Sbjct: 111 SLIHDDLPAMDNDDY-RRGKLTNHKVFGEDIAILAGDGLLAYAFEYVATQTRNVPPL--- 166
Query: 174 SGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRL 233
+IL V+ + R +G+ G+V GQ +L+ + D + G + +K G L
Sbjct: 167 --QILEVIARLGRTVGAAGLVGGQVLDLESAGKPDISAETLGF--------IHTQKTGAL 216
Query: 234 HACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVN 293
GA+L G ++I L RY +G+ I+ L T EEL K A K +
Sbjct: 217 LETSVVSGAVLAGAKAEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKDLQAQ 276
Query: 294 SFN-------DENAEVIFSLVDDNITHVLGFN 318
+E+ + L+D I + G++
Sbjct: 277 KATYPSLWGIEESRQQAQQLIDSAIGELSGYD 308
>gi|166364196|ref|YP_001656469.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
NIES-843]
gi|166086569|dbj|BAG01277.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
NIES-843]
Length = 309
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 125/272 (45%), Gaps = 24/272 (8%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L ++V+ P ++YE MR+ + A + P LC+A CEL+GG E A+ A AL ++H
Sbjct: 34 LDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGSLEMALPTACALEMIHTM 93
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDN---PAGNN 173
S IH++LP D + K T + F + +L D +L + E +A+ P
Sbjct: 94 SLIHDDLPAMDNDDY-RRGKLTNHKVFGEDIAILAGDGLLAYAFEYVATQTRNVPPL--- 149
Query: 174 SGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRL 233
+IL V+ + R +G+ G+V GQ +L+ + D + G + +K G L
Sbjct: 150 --QILEVIARLGRTVGAAGLVGGQVLDLESAGKPDISAETLGF--------IHTQKTGAL 199
Query: 234 HACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVN 293
GA+L G ++I L RY +G+ I+ L T EEL K A K +
Sbjct: 200 LETSVVSGAVLAGAKAEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKDLQAQ 259
Query: 294 SFN-------DENAEVIFSLVDDNITHVLGFN 318
+E+ + L+D I + G++
Sbjct: 260 KATYPSLWGIEESRQQAQQLIDSAIGELSGYD 291
>gi|88910043|gb|ABD57975.1| geranyl diphosphate synthase [Arnebia euchroma]
Length = 338
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 122/246 (49%), Gaps = 10/246 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
KSY + I L AV + EP++++E MR+ + + + P +C+AACELVGGH
Sbjct: 47 KSYMINKITSINEALDSAVPLIEPIKLHEAMRYTLLSGGKRVRPIVCIAACELVGGHEST 106
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
+ A A ++H+ S + ++LP D + K + + + LL ++ ++
Sbjct: 107 VMPTACAQEMIHSMSVMLDDLPCMDNDDF-RRGKLSNHRVYGEKITLLAVRSLQALAVDH 165
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+ ++ G R++R + EM GS+G GQ +L CS +D + + + + M
Sbjct: 166 VVTATR--GVPPERLVRALTEMAILTGSKGAAAGQIADL-CSSGEDFNVSIEQLEHIHM- 221
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
+K G L GAI+GG SE+EIE LR++ +G++ IV L T+ EL
Sbjct: 222 -----QKTGTLCEGSVVSGAIIGGASEEEIEKLRKFSKCIGLMFQIVDDVLDVTKSSMEL 276
Query: 283 KKLAFK 288
K A K
Sbjct: 277 GKPAGK 282
>gi|428769681|ref|YP_007161471.1| farnesyl-diphosphate synthase [Cyanobacterium aponinum PCC 10605]
gi|428683960|gb|AFZ53427.1| farnesyl-diphosphate synthase [Cyanobacterium aponinum PCC 10605]
Length = 325
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 126/255 (49%), Gaps = 15/255 (5%)
Query: 36 MSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACEL 95
+ +P K Y E + L ++ +++P ++YE MR+ + A + P LC+A EL
Sbjct: 29 IDSPFNLKVYLQEKKEIVEKALDDSLPIEKPEKIYEAMRYSLLAGGKRLRPILCLAVAEL 88
Query: 96 VGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAM 155
+G + A+ A AL ++H S IH++LP D + + T + + + +L D +
Sbjct: 89 LGQTEDVAMPTACALEMIHTMSLIHDDLPAMDNDDY-RRGRLTNHKVYGEDIAILAGDGL 147
Query: 156 LPFGLELLA--SSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKL 213
L + E +A +S P S RI++V+ + +A+G+ G+V GQ +L+C D
Sbjct: 148 LAYAFEFVAIKTSCIP----SERIVKVLAILGKAVGANGLVGGQVLDLECEGKAD----- 198
Query: 214 NGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRL 273
+T +++ +K L AC + GA+L G SE ++ L Y +G+ IV L
Sbjct: 199 --VTADTLSFIHRRKTGALLEAC-VSSGAVLAGASEDDLARLSVYAQNIGLAFQIVDDIL 255
Query: 274 GPTEEIEELKKLAFK 288
T EEL K A K
Sbjct: 256 DVTATSEELGKTAGK 270
>gi|414076496|ref|YP_006995814.1| geranyltranstransferase [Anabaena sp. 90]
gi|413969912|gb|AFW94001.1| geranyltranstransferase [Anabaena sp. 90]
Length = 312
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 124/263 (47%), Gaps = 23/263 (8%)
Query: 36 MSTPNKNKS-------YWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPAL 88
+ TP K++S Y + L ++ V P ++YE MR+ + A + P L
Sbjct: 8 LETPKKSESASFNLATYLKQRQQLCEQALDNSITVVYPEKIYEAMRYSLLAGGKRVRPIL 67
Query: 89 CVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTE 148
C+A +++GG E A+ A A+ ++H S IH++LP D + K T + + +
Sbjct: 68 CLATADMIGGTIEMAMATACAVEMIHTMSLIHDDLPAMDNDDY-RRGKLTNHKVYGEDVA 126
Query: 149 LLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDD 208
+L D +L E +A+ P R+L+V++ + +A+G+ G+V GQ +L+
Sbjct: 127 ILAGDGLLALAFEHVAAQ-TPTNVPRDRVLQVIIRLGKALGAAGLVGGQVVDLES----- 180
Query: 209 DDRKLNGITDVEMTYETY---KKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
G +D+ + + K L AC CG I+ G S ++++ L RY +G+
Sbjct: 181 -----EGKSDISLETLNFIHNHKTAALLEAC-VVCGGIIAGASAEDVQKLTRYSQNIGLA 234
Query: 266 QGIVSRRLGPTEEIEELKKLAFK 288
I+ L T E+L K A K
Sbjct: 235 FQIIDDILDITATQEQLGKTAGK 257
>gi|300869086|ref|ZP_07113686.1| farnesyl-diphosphate synthase [Oscillatoria sp. PCC 6506]
gi|300332902|emb|CBN58882.1| farnesyl-diphosphate synthase [Oscillatoria sp. PCC 6506]
Length = 308
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 122/265 (46%), Gaps = 18/265 (6%)
Query: 30 MMVTMAMSTPNKNKSYWTSVH-----EDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNM 84
M++ +P S+ SV+ + A L AV V P ++YE MR+ + A +
Sbjct: 1 MVLVRETHSPQPESSFDLSVYLAERAAAVEAALDSAVPVTYPEKIYEAMRYSLLAGGKRL 60
Query: 85 APALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFK 144
P LC+A CEL+GG E A+ A A + H S IH++LP D + K T + +
Sbjct: 61 RPILCLATCELLGGTVEMAMPTACAFEMSHTMSLIHDDLPAMDNDDY-RRGKLTNHKVYG 119
Query: 145 PNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCS 204
+ +L D +L + E +A+ ++L+V+ + RA+G+ +V GQ +L+
Sbjct: 120 EDIAILAGDGLLAYAFEFIAAQTQNVPPQ--QVLQVVARLGRAVGAAELVGGQVVDLESE 177
Query: 205 QCDD-DDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVG 263
D + LN I + K G L CGAIL G +++ L RY +G
Sbjct: 178 GVSDVSEETLNFI---------HTHKTGALLEACVVCGAILAGAEPTDLQRLSRYAQNIG 228
Query: 264 MIQGIVSRRLGPTEEIEELKKLAFK 288
+ IV L T EEL K A K
Sbjct: 229 LAFQIVDDILDITATQEELGKTAGK 253
>gi|422305087|ref|ZP_16392424.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9806]
gi|389789644|emb|CCI14373.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9806]
Length = 309
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 112/235 (47%), Gaps = 17/235 (7%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L ++V+ P ++YE MR+ + A + P LC+A CEL+GG E A+ A AL ++H
Sbjct: 34 LDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGSLEMALPTACALEMIHTM 93
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDN---PAGNN 173
S IH++LP D + K T + F + +L D +L + E +A+ + P
Sbjct: 94 SLIHDDLPAMDNDDY-RRGKLTNHKVFGEDIAILAGDGLLAYAFEYVATQTHNVPPL--- 149
Query: 174 SGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRL 233
+IL V+ + R +G+ G+V GQ +L+ D + G + +K G L
Sbjct: 150 --QILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGF--------IHTQKTGAL 199
Query: 234 HACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GA+L G ++I L RY +G+ I+ L T EEL K A K
Sbjct: 200 LETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGK 254
>gi|307152571|ref|YP_003887955.1| polyprenyl synthetase [Cyanothece sp. PCC 7822]
gi|306982799|gb|ADN14680.1| Polyprenyl synthetase [Cyanothece sp. PCC 7822]
Length = 307
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 120/242 (49%), Gaps = 11/242 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K+Y + + L ++ + +P ++YE MR+ + A + P LC+A CEL+GG E
Sbjct: 18 KAYLKQQKDLVDQALEGSLPITKPEKIYEAMRYSLLAGGKRLRPILCLATCELMGGTIEM 77
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ A AL ++H S IH++LP D + K T + + + +L D +L + E
Sbjct: 78 AMPTACALEMIHTMSLIHDDLPAMDNDDY-RRGKLTNHKVYGEDIAILAGDGLLSYAFEF 136
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+A+ N ++L+V+ + R +G+ G+V GQ +L+ + KL+ IT +T
Sbjct: 137 VATQTRNVPPN--QVLQVIARLGRTVGAAGLVGGQVLDLES------EGKLD-ITAETLT 187
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
+ + K G L GAIL G + ++ L RY +G+ I+ L T EEL
Sbjct: 188 F-IHTHKTGALLETSVLSGAILAGATSEDQRRLSRYAQNIGLAFQIIDDILDITSTQEEL 246
Query: 283 KK 284
K
Sbjct: 247 GK 248
>gi|440682769|ref|YP_007157564.1| farnesyl-diphosphate synthase [Anabaena cylindrica PCC 7122]
gi|428679888|gb|AFZ58654.1| farnesyl-diphosphate synthase [Anabaena cylindrica PCC 7122]
Length = 309
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 116/245 (47%), Gaps = 10/245 (4%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
SY + L QA+ V P ++YE MR+ + A + P LC+A E++GG E A
Sbjct: 20 SYLKERQKLCDTALDQAIPVVYPEKIYEAMRYSLLAGGKRVRPILCLATSEMIGGTIEMA 79
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ A A+ ++H S IH++LP D + K T + + + +L D +L E +
Sbjct: 80 MPTACAVEMIHTMSLIHDDLPAMDNDDY-RRGKLTNHKVYGEDIAILAGDGLLALAFEFV 138
Query: 164 ASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTY 223
A+ P R L+V+ + +A+G+ G+V GQ +L D + I+ + +
Sbjct: 139 ATQ-TPQNVPRERALQVIARLGKALGAAGLVGGQVVDL-------DSEGKSDISLETLNF 190
Query: 224 ETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELK 283
K L AC CG ++ G S +++E L RY +G+ I+ L T E+L
Sbjct: 191 IHNHKTAALLEAC-VVCGGVIAGASAEDVEKLTRYSQNIGLAFQIIDDILDITSTQEQLG 249
Query: 284 KLAFK 288
K A K
Sbjct: 250 KTAGK 254
>gi|218245046|ref|YP_002370417.1| polyprenyl synthetase [Cyanothece sp. PCC 8801]
gi|257058070|ref|YP_003135958.1| polyprenyl synthetase [Cyanothece sp. PCC 8802]
gi|218165524|gb|ACK64261.1| Polyprenyl synthetase [Cyanothece sp. PCC 8801]
gi|256588236|gb|ACU99122.1| Polyprenyl synthetase [Cyanothece sp. PCC 8802]
Length = 309
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 120/258 (46%), Gaps = 11/258 (4%)
Query: 31 MVTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCV 90
+VT ++ SY + + A L +++ + P +YE MR+ + A + P LC+
Sbjct: 8 LVTQQETSNFDLASYLKDKQQLVEAALDRSLAITRPETIYEAMRYSLLAGGKRLRPILCL 67
Query: 91 AACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELL 150
CEL+GG E A+ A AL ++H S IH++LP D + K T + + + +L
Sbjct: 68 TTCELLGGTLEMALPTACALEMIHTMSLIHDDLPAMDNDD-YRRGKLTNHKKYGEDIAIL 126
Query: 151 VADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDD 210
D +L + E A+ + ++ V+ + R +G G+V GQ +L+ D
Sbjct: 127 AGDGLLAYAFEYAATQTRNV--DPHNLINVLGRLGRTVGPAGLVGGQVLDLESEGKPD-- 182
Query: 211 RKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVS 270
IT V+ + K G L GAIL GGS ++I+ L +Y +G+ I+
Sbjct: 183 -----IT-VDTLKFIHTHKTGALLETSVVSGAILAGGSTEDIQRLSQYAQNIGLAFQIID 236
Query: 271 RRLGPTEEIEELKKLAFK 288
L T EEL K A K
Sbjct: 237 DILDITSTQEELGKTAGK 254
>gi|425457244|ref|ZP_18836950.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9807]
gi|389801481|emb|CCI19370.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9807]
Length = 309
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 110/235 (46%), Gaps = 17/235 (7%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L ++V+ P ++YE MR+ + A + P LC+A CEL+GG E A+ A AL ++H
Sbjct: 34 LDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGSLEMALPTACALEMIHTM 93
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD---NPAGNN 173
S IH++LP D + K T + F + +L D +L + E +A+ P
Sbjct: 94 SLIHDDLPAMDNDDY-RRGKLTNHKVFGEDIAILAGDGLLAYAFEYVATQTLNVPPV--- 149
Query: 174 SGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRL 233
+IL V+ + R +G+ G+V GQ +L+ D E + +K G L
Sbjct: 150 --QILEVIARLGRTVGAAGLVGGQVLDLESEGKPD--------ISAETLSFIHTQKTGAL 199
Query: 234 HACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GA+L G ++I L RY +G+ I+ L T EEL K A K
Sbjct: 200 LETSVVSGAVLAGAKAEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGK 254
>gi|425446281|ref|ZP_18826289.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9443]
gi|389733543|emb|CCI02694.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9443]
Length = 309
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 112/235 (47%), Gaps = 17/235 (7%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L ++V+ P ++YE MR+ + A + P LC+A CEL+GG E A+ A AL ++H
Sbjct: 34 LDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGSLEMALPTACALEMIHTM 93
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDN---PAGNN 173
S IH++LP D + K T + F + +L D +L + E +A+ + P
Sbjct: 94 SLIHDDLPAMDNDDY-RRGKLTNHKVFGEDIAILAGDGLLAYAFEYVATQTHNVPPL--- 149
Query: 174 SGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRL 233
+IL V+ + R +G+ G+V GQ +L+ D + G + +K G L
Sbjct: 150 --QILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGF--------IHTQKTGAL 199
Query: 234 HACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GA+L G ++I L RY +G+ I+ L T EEL K A K
Sbjct: 200 LETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGK 254
>gi|443669312|ref|ZP_21134542.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
DIANCHI905]
gi|159030944|emb|CAO88634.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443330405|gb|ELS45123.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
DIANCHI905]
Length = 309
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 119/252 (47%), Gaps = 14/252 (5%)
Query: 40 NKNKSYWTSVHED---IGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELV 96
N+N S + + E + + L ++V+ P ++YE MR+ + A + P LC+A CEL+
Sbjct: 14 NENFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELM 73
Query: 97 GGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAML 156
GG E A+ A AL ++H S IH++LP D + K T + F + +L D +L
Sbjct: 74 GGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDY-RRGKLTNHKVFGEDIAILAGDGLL 132
Query: 157 PFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGI 216
+ E +A+ +IL V+ + R +G+ G+V GQ +L+ D + G
Sbjct: 133 AYAFEYVAT--QTLNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGF 190
Query: 217 TDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPT 276
+ +K G L GA+L G ++I L RY +G+ I+ L T
Sbjct: 191 --------IHTQKTGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDIT 242
Query: 277 EEIEELKKLAFK 288
EEL K A K
Sbjct: 243 ATKEELGKTAGK 254
>gi|219115519|ref|XP_002178555.1| farnesyltranstransferase [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410290|gb|EEC50220.1| farnesyltranstransferase [Phaeodactylum tricornutum CCAP 1055/1]
Length = 337
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 135/285 (47%), Gaps = 19/285 (6%)
Query: 12 AHVAPRRNHSRPSLSYRPMMVTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVV--KEPVEV 69
A VAP H RP R + + A + + N+ Y I L ++VV KE ++
Sbjct: 19 AFVAPSTFHFRP----RVTLQSTAATDFDLNQ-YIADKLPLIEKALDESVVSTEKETEKI 73
Query: 70 YEPMRHFVFAAPVNMAPALCVAACELVG-GHREQAIVAAAALHVMHAASFIHENLPLSDR 128
E M++ + A + P LC+AACE+ G A+ AA +L ++H S IH++LP D
Sbjct: 74 VEAMKYSLMAGGKRIRPVLCLAACEMFNDGDSTPAMPAAVSLEMIHTMSLIHDDLPSMDN 133
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
L + KPT + + + +L DA+L +A + G + R+L V+V + R++
Sbjct: 134 DDL-RRGKPTCHVIYGEDVAILAGDALLSDSFRHVA--EQTKGVAADRVLDVVVRLGRSV 190
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
G++G+ GQ +L+C G +E + K L A GAI+GG S
Sbjct: 191 GAKGLAGGQVMDLECEG--------KGSATLEDLRWIHTHKTATLLQVAVASGAIIGGAS 242
Query: 249 EKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVN 293
+E++ ++ +G+ + L T+ EEL K A K + +
Sbjct: 243 AEEVKACEQFALNIGLAFQVADDILDVTQSTEELGKTAGKDEDTD 287
>gi|425459314|ref|ZP_18838800.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9808]
gi|389822992|emb|CCI29162.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9808]
Length = 326
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 115/248 (46%), Gaps = 17/248 (6%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
SY + + L ++V+ P ++YE MR+ + A + P LC+A CEL+GG E A
Sbjct: 38 SYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGSLEMA 97
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ A AL ++H S IH++LP D + K T + F + +L D +L + E +
Sbjct: 98 LPTACALEMIHTMSLIHDDLPAMDNDDY-RRGKLTNHKVFGEDIAILAGDGLLAYAFEYV 156
Query: 164 ASSDN---PAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVE 220
A+ P +IL V+ + R +G+ G+V GQ +L+ D + G
Sbjct: 157 ATQTRNVPPL-----QILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGF---- 207
Query: 221 MTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
+ +K G L GA+L G ++I L RY +G+ I+ L T E
Sbjct: 208 ----IHTQKTGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKE 263
Query: 281 ELKKLAFK 288
EL K A K
Sbjct: 264 ELGKTAGK 271
>gi|119489387|ref|ZP_01622167.1| Polyprenyl synthetase [Lyngbya sp. PCC 8106]
gi|119454660|gb|EAW35806.1| Polyprenyl synthetase [Lyngbya sp. PCC 8106]
Length = 287
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 114/232 (49%), Gaps = 11/232 (4%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L +++ V P ++YE MR+ + A + P LC+A CEL GG E A+ A +L ++H
Sbjct: 12 LDRSIAVIYPEKIYEAMRYSLLAGGKRLRPILCLATCELAGGTMEMAMPTACSLEMIHTM 71
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGR 176
S IH++LP D + + T + + + +L D +L + E +A+ +
Sbjct: 72 SLIHDDLPAMDNDDY-RRGQLTNHKVYGEDIAILAGDGLLSYAFEFVATQTTNVPPQ--Q 128
Query: 177 ILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHAC 236
+L V+ + RA+G+ G+V GQ +++ D IT+ ++T+ K L AC
Sbjct: 129 VLDVIGHLGRAVGAAGLVGGQVVDVESEGKTD-------ITEEQLTFIHTHKTGALLEAC 181
Query: 237 GAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GAIL G S + E L RY +G+ IV L T EEL K A K
Sbjct: 182 -VVSGAILAGTSTENRERLSRYAQKIGLAFQIVDDILDITATQEELGKTAGK 232
>gi|425436138|ref|ZP_18816577.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9432]
gi|425449068|ref|ZP_18828911.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 7941]
gi|389679196|emb|CCH92000.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9432]
gi|389764903|emb|CCI09068.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 7941]
Length = 309
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 110/232 (47%), Gaps = 11/232 (4%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L ++V+ P ++YE MR+ + A + P LC+A CEL+GG E A+ A AL ++H
Sbjct: 34 LDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGSLEMALPTACALEMIHTM 93
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGR 176
S IH++LP D + K T + F + +L D +L + E +A+ +
Sbjct: 94 SLIHDDLPAMDNDDY-RRGKLTNHKVFGEDIAILAGDGLLAYAFEYVAT--QTLNVPPLQ 150
Query: 177 ILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHAC 236
IL V+ + R +G+ G+V GQ +L+ D + G + +K G L
Sbjct: 151 ILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGF--------IHTQKTGALLET 202
Query: 237 GAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GA+L G ++I L RY +G+ I+ L T EEL K A K
Sbjct: 203 SVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGK 254
>gi|16329282|ref|NP_440010.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|383321022|ref|YP_005381875.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383324192|ref|YP_005385045.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383490076|ref|YP_005407752.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384435342|ref|YP_005650066.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|451813441|ref|YP_007449893.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|1651762|dbj|BAA16690.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|339272374|dbj|BAK48861.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|359270341|dbj|BAL27860.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359273512|dbj|BAL31030.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359276682|dbj|BAL34199.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|451779410|gb|AGF50379.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
Length = 302
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 113/234 (48%), Gaps = 11/234 (4%)
Query: 55 AHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMH 114
A L ++ + P ++YE MR+ + A + P LC+ ACEL GG A+ A AL ++H
Sbjct: 25 AALDSSLAIARPEKIYEAMRYSLLAGGKRLRPILCITACELCGGDEALALPTACALEMIH 84
Query: 115 AASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNS 174
S IH++LP D + KPT + + + +L D +L + E + + A +
Sbjct: 85 TMSLIHDDLPSMDNDDF-RRGKPTNHKVYGEDIAILAGDGLLAYAFEYVVTHTPQADPQA 143
Query: 175 GRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLH 234
+L+V+ + R +G+ G+V GQ +L+ D IT +T+ + K G L
Sbjct: 144 --LLQVIARLGRTVGAAGLVGGQVLDLESEGRTD-------ITPETLTF-IHTHKTGALL 193
Query: 235 ACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GAIL G + ++ + L RY +G+ +V L T EEL K A K
Sbjct: 194 EASVLTGAILAGATGEQQQRLARYAQNIGLAFQVVDDILDITATQEELGKTAGK 247
>gi|425441812|ref|ZP_18822079.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9717]
gi|389717377|emb|CCH98522.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9717]
Length = 326
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 110/232 (47%), Gaps = 11/232 (4%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L ++V+ P ++YE MR+ + A + P LC+A CEL+GG E A+ A AL ++H
Sbjct: 51 LDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGSLEMALPTACALEMIHTM 110
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGR 176
S IH++LP D + K T + F + +L D +L + E +A+ +
Sbjct: 111 SLIHDDLPAMDNDDY-RRGKLTNHKVFGEDIAILAGDGLLAYAFEYVAT--QTLNVPPLQ 167
Query: 177 ILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHAC 236
IL V+ + R +G+ G+V GQ +L+ D + G + +K G L
Sbjct: 168 ILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGF--------IHTQKTGALLET 219
Query: 237 GAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GA+L G ++I L RY +G+ I+ L T EEL K A K
Sbjct: 220 SVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGK 271
>gi|440753463|ref|ZP_20932666.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
TAIHU98]
gi|440177956|gb|ELP57229.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
TAIHU98]
Length = 309
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 110/232 (47%), Gaps = 11/232 (4%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L ++V+ P ++YE MR+ + A + P LC+A CEL+GG E A+ A AL ++H
Sbjct: 34 LDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGSLEMALPTACALEMIHTM 93
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGR 176
S IH++LP D + K T + F + +L D +L + E +A+ +
Sbjct: 94 SLIHDDLPAMDNDDY-RRGKLTNHKVFGEDIAILAGDGLLAYAFEYVAT--QTLNVPPLQ 150
Query: 177 ILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHAC 236
IL V+ + R +G+ G+V GQ +L+ D + G + +K G L
Sbjct: 151 ILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGF--------IHTQKTGALLET 202
Query: 237 GAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GA+L G ++I L RY +G+ I+ L T EEL K A K
Sbjct: 203 SVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGK 254
>gi|126030919|pdb|2J1O|A Chain A, Geranylgeranyl Diphosphate Synthase From Sinapis Alba
Length = 268
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 115/233 (49%), Gaps = 33/233 (14%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
SY + + L AV ++EP++++E MR+ + A + P LC+AACELVGG A
Sbjct: 15 SYIIRKADSVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESLA 74
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ AA A+ ++H S IH+++ + + +L DA+L F E L
Sbjct: 75 MPAACAVEMIHTMSLIHDDV-------------------YGEDVAVLAGDALLSFAFEHL 115
Query: 164 ASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTY 223
AS+ + + R++R + E+ +A+G++G+V GQ ++ +E
Sbjct: 116 ASA-TSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISN-------------VGLEHLK 161
Query: 224 ETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPT 276
+ K L A G I+GGGS++EIE LR++ +G++ +V L T
Sbjct: 162 FIHLHKTAALLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVT 214
>gi|113953464|ref|YP_730204.1| geranylgeranyl diphosphate synthase [Synechococcus sp. CC9311]
gi|113880815|gb|ABI45773.1| geranylgeranyl diphosphate synthase [Synechococcus sp. CC9311]
Length = 312
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 114/228 (50%), Gaps = 18/228 (7%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
+ P + + MR+ + A + P LC+AACELVGG E A+ A AL ++H S IH++L
Sbjct: 45 ERPESLRDAMRYSLLAGGKRLRPILCLAACELVGGSSELAMPTAVALEMIHTMSLIHDDL 104
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA--SSDNPAGNNSGRILRVM 181
P D L + +PT + + +L DAML E++A S++ PA R+LRV+
Sbjct: 105 PAMDNDDL-RRGRPTNHKVYGDAMAILAGDAMLSRAFEMVAVRSANVPA----DRLLRVV 159
Query: 182 VEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVE-MTYETYKKKEGRLHACGAAC 240
E+ G+ G+V GQ +L+ D+E + Y K L AC
Sbjct: 160 GELALVSGAPGLVGGQVVDLESE---------GQAVDLETLEYIHLHKTAALLRAC-VVT 209
Query: 241 GAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GA++GG ++ +++ +R Y +G+ I+ L T E L K A K
Sbjct: 210 GALIGGANDDQLQAMRTYANGIGLAFQIIDDILDVTASSEVLGKTAGK 257
>gi|352093628|ref|ZP_08954799.1| Polyprenyl synthetase [Synechococcus sp. WH 8016]
gi|351679968|gb|EHA63100.1| Polyprenyl synthetase [Synechococcus sp. WH 8016]
Length = 312
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 115/228 (50%), Gaps = 18/228 (7%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
+ P + + MR+ + A + P LC+AACELVGG E A+ A AL ++H S IH++L
Sbjct: 45 ERPESLRDAMRYSLLAGGKRLRPILCLAACELVGGSPELAMPTAVALEMIHTMSLIHDDL 104
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA--SSDNPAGNNSGRILRVM 181
P D L + +PT + + +L DAML E++A S++ PA R+LRV+
Sbjct: 105 PAMDNDDL-RRGRPTNHKVYGDAMAILAGDAMLSRAFEMVAVRSANVPA----ERLLRVV 159
Query: 182 VEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVE-MTYETYKKKEGRLHACGAAC 240
E+ G+ G+V GQ +L+ D+E + Y K L AC
Sbjct: 160 GELALVSGAPGLVGGQVVDLESE---------GQAVDLETLEYIHLHKTAALLRAC-VVT 209
Query: 241 GAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GA++GG S+++++ +R Y +G+ I+ L T E L K A K
Sbjct: 210 GALIGGASDQQLQAMRTYANGIGLAFQIIDDILDVTASSEVLGKTAGK 257
>gi|345017599|ref|YP_004819952.1| polyprenyl synthetase [Thermoanaerobacter wiegelii Rt8.B1]
gi|344032942|gb|AEM78668.1| Polyprenyl synthetase [Thermoanaerobacter wiegelii Rt8.B1]
Length = 294
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 115/247 (46%), Gaps = 21/247 (8%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
++P +YE MR+ VFA + P LC+++CEL+GG ++A+ A A+ ++H S IH++L
Sbjct: 25 EKPEIIYEAMRYSVFAGGKRLRPVLCLSSCELLGGDIKKALPVACAIELIHTYSLIHDDL 84
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE 183
P D L + KPT + + +L D +L G E+L + RIL+ E
Sbjct: 85 PAMDNDDL-RRGKPTNHKVYGEAIAILAGDGLLNLGYEVLVRHALEHPEDYERILKATNE 143
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYK----KKEGRLHACGAA 239
+ A G +G++ GQ ++ SQ + E+TYE K K G L
Sbjct: 144 IATASGCKGIIGGQVVDI-LSQ------------NTELTYEELKFMHEHKTGALIEASVC 190
Query: 240 CGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVNSFNDEN 299
GA + +E+EI LR Y +G I L E E+L K +E F N
Sbjct: 191 AGAYIASATEEEIHALREYARLIGFAFQIKDDILDVIGEEEKLGKKVGSDKEKGKFTFVN 250
Query: 300 AEVIFSL 306
IF L
Sbjct: 251 ---IFGL 254
>gi|75908916|ref|YP_323212.1| farnesyl-diphosphate synthase [Anabaena variabilis ATCC 29413]
gi|75702641|gb|ABA22317.1| farnesyl-diphosphate synthase [Anabaena variabilis ATCC 29413]
Length = 309
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 114/234 (48%), Gaps = 10/234 (4%)
Query: 55 AHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMH 114
A L +A+ V P ++YE MR+ + A + P LC+A E++GG E A+ A A+ ++H
Sbjct: 31 AALDEAIPVIYPEKIYESMRYSLLAGGKRLRPILCLATSEMMGGTIEIAMPTACAVEMIH 90
Query: 115 AASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNS 174
S IH++LP D + T + + + +L D +L + E +A P
Sbjct: 91 TMSLIHDDLPAMDNDDY-RRGMLTNHKVYGDDIAILAGDGLLAYAFEFVAIR-TPESVPR 148
Query: 175 GRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLH 234
R+L+V+ + RA+G+ G+V GQ +L D + I+ + + K L
Sbjct: 149 DRVLQVVARLGRALGAAGLVGGQVVDL-------DSEGKSDISLETLNFIHNHKTAALLE 201
Query: 235 ACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
AC CG IL G S ++++ L RY +G+ I+ L T E+L K A K
Sbjct: 202 AC-VVCGGILAGASSEDVQRLSRYSQNIGLAFQIIDDILDITSTQEQLGKTAGK 254
>gi|194477224|ref|YP_002049403.1| geranylgeranyl pyrophosphate synthase [Paulinella chromatophora]
gi|171192231|gb|ACB43193.1| geranylgeranyl pyrophosphate synthase [Paulinella chromatophora]
Length = 300
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 128/258 (49%), Gaps = 13/258 (5%)
Query: 31 MVTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCV 90
MVT A+ T +Y + E + L ++ + P + E MR+ + A + P LC+
Sbjct: 1 MVT-AVRTEFDFAAYLRAARESVELALDGSLGTERPTSLSEAMRYSLLAGGKRLRPILCL 59
Query: 91 AACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELL 150
AACEL GG+ A+ A AL ++H S IH++LP D L + +PT + + T +L
Sbjct: 60 AACELAGGNVAAAMPTAVALEMIHTMSLIHDDLPAMDNDDL-RRGRPTNHKVYGEATAIL 118
Query: 151 VADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDD 210
DA+L E++A G + IL+V+ E++ A G+ G+V GQ +L+ +
Sbjct: 119 AGDALLTRAFEIVAL--RSPGVSPECILKVIGELSLAAGAPGLVGGQMVDLES-----EG 171
Query: 211 RKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVS 270
+++N T + Y K L AC CG ++G S++ ++ LR Y +G+ I+
Sbjct: 172 KEVNLDT---LEYIHLHKTGALLSAC-VICGGLIGDASDELLQALRNYARGIGLAFQIID 227
Query: 271 RRLGPTEEIEELKKLAFK 288
L T + L K A K
Sbjct: 228 DILDVTASSDVLGKTAGK 245
>gi|425469791|ref|ZP_18848698.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9701]
gi|389880334|emb|CCI38905.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9701]
Length = 326
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 20/255 (7%)
Query: 40 NKNKSYWTSVHED---IGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELV 96
N+N S + + E + + L ++V+ P ++YE MR+ + A + P LC+A CEL+
Sbjct: 31 NENFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELM 90
Query: 97 GGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAML 156
GG E A+ A AL ++H S IH++LP D + K T + F + +L D +L
Sbjct: 91 GGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDY-RRGKLTNHKVFGEDIAILAGDGLL 149
Query: 157 PFGLELLASSDN---PAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKL 213
+ E + + P ++L V+ + R +G+ G+V GQ +L+ D +
Sbjct: 150 AYAFEYVVTQTRNVPPV-----QVLEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAET 204
Query: 214 NGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRL 273
G + +K G L GA+L G ++I L RY +G+ I+ L
Sbjct: 205 LGF--------IHTQKTGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVL 256
Query: 274 GPTEEIEELKKLAFK 288
T EEL K A K
Sbjct: 257 DITATKEELGKTAGK 271
>gi|308080812|ref|NP_001183944.1| putative geranylgeranyl pyrophosphate synthase 2 [Zea mays]
gi|148535921|gb|ABQ85647.1| putative geranylgeranyl pyrophosphate synthase 2 [Zea mays]
Length = 361
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 120/228 (52%), Gaps = 13/228 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P +++ MR+ + A + PALC+AAC +VGG A+ AAAA+ ++H S +H++LP
Sbjct: 86 PAALHDAMRYALLAGGKRVRPALCLAACAVVGGPESWAMPAAAAVEMVHTMSLVHDDLPC 145
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLAS--SDNPAGN---NSGRILRV 180
D L + KPT + + +L DA+L +AS S PA + + R++R
Sbjct: 146 MDDDDL-RRGKPTCHVVYGEPIAVLAGDALLSLSFHHMASVGSYPPAVDPEKHPARVVRA 204
Query: 181 MVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAAC 240
+ E+ R +GS+G+V GQ +L+ + +E+ + K L
Sbjct: 205 IGELARCIGSEGLVAGQVVDLEMTGTSQ-------TVPLELLEYIHLHKTAALLEASVVI 257
Query: 241 GAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GAI+GGG++++IE LR+Y +G++ +V L T+ EEL K A K
Sbjct: 258 GAIIGGGTDEQIEALRKYARSIGLLFQVVDDILDVTKSSEELGKTAGK 305
>gi|302773810|ref|XP_002970322.1| hypothetical protein SELMODRAFT_231604 [Selaginella moellendorffii]
gi|300161838|gb|EFJ28452.1| hypothetical protein SELMODRAFT_231604 [Selaginella moellendorffii]
Length = 261
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 115/217 (52%), Gaps = 14/217 (6%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
++E MR+ V P C+AACELVGG ++ A+ A AL ++ A+ + ++LP D
Sbjct: 1 MHEAMRYAV-GGGRRTCPIACIAACELVGGTQDDAMPGACALEMIKASFCVQDDLPSIDD 59
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
+ L KPT++ AF T L A+L G E LA+ +G+ + R++ E++RA+
Sbjct: 60 SEL-RHGKPTVHRAFGIPTALFAGTALLALGFEHLAA--RYSGDTAARMV---AEVSRAI 113
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
GS G++ GQ +L ++ DR + ++E + K L GAI GG S
Sbjct: 114 GSTGLLAGQAVDL---GIENPDRAV----ELETLEFVHLHKTSALLEASLVAGAIAGGAS 166
Query: 249 EKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKL 285
E+EIE LR YG G++ IV T+ +EEL K+
Sbjct: 167 EQEIEALRAYGRVTGLLYQIVDDVADATKTMEELGKI 203
>gi|414887302|tpg|DAA63316.1| TPA: putative geranylgeranyl pyrophosphate synthase 2 [Zea mays]
Length = 441
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 120/228 (52%), Gaps = 13/228 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P +++ MR+ + A + PALC+AAC +VGG A+ AAAA+ ++H S +H++LP
Sbjct: 166 PAALHDAMRYALLAGGKRVRPALCLAACAVVGGPESWAMPAAAAVEMVHTMSLVHDDLPC 225
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLAS--SDNPAGN---NSGRILRV 180
D L + KPT + + +L DA+L +AS S PA + + R++R
Sbjct: 226 MDDDDLR-RGKPTCHVVYGEPIAVLAGDALLSLSFHHMASVGSYPPAVDPEKHPARVVRA 284
Query: 181 MVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAAC 240
+ E+ R +GS+G+V GQ +L+ + +E+ + K L
Sbjct: 285 IGELARCIGSEGLVAGQVVDLEMTGTSQ-------TVPLELLEYIHLHKTAALLEASVVI 337
Query: 241 GAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GAI+GGG++++IE LR+Y +G++ +V L T+ EEL K A K
Sbjct: 338 GAIIGGGTDEQIEALRKYARSIGLLFQVVDDILDVTKSSEELGKTAGK 385
>gi|392409860|ref|YP_006446467.1| geranylgeranyl pyrophosphate synthase [Desulfomonile tiedjei DSM
6799]
gi|390622996|gb|AFM24203.1| geranylgeranyl pyrophosphate synthase [Desulfomonile tiedjei DSM
6799]
Length = 299
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 10/201 (4%)
Query: 65 EPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLP 124
EP +++ MR+ VFA + P L +AA E+VGG +Q + A AL +H S IH++LP
Sbjct: 31 EPAVLHQAMRYSVFAGGKRIRPVLAMAAAEVVGGSGKQVLPLAVALECIHTYSLIHDDLP 90
Query: 125 LSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEM 184
D L + KPT++ F +L DA+L +GL +L+ + + +L + E+
Sbjct: 91 AMDNDDL-RRGKPTVHKVFGEAVAILAGDALLTYGLGVLSLPEVSRTYRAENLLAAIREL 149
Query: 185 TRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAIL 244
A GS ++ GQ ++ C D D M + K G L CGA L
Sbjct: 150 ALAAGSTRLIAGQVMDILCEGKD---------VDKHMVEYIVRNKTGALIRASLVCGATL 200
Query: 245 GGGSEKEIELLRRYGFYVGMI 265
G + IE+L ++G +GMI
Sbjct: 201 VDGELERIEVLGKFGDLLGMI 221
>gi|197117645|ref|YP_002138072.1| trans-isoprenyl diphosphate synthase [Geobacter bemidjiensis Bem]
gi|197087005|gb|ACH38276.1| trans-isoprenyl diphosphate synthase [Geobacter bemidjiensis Bem]
Length = 295
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 106/223 (47%), Gaps = 15/223 (6%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++ MR+ VFA + P L +AACE VGG A+ AA A+ ++H S IH++LP
Sbjct: 29 PASLHGSMRYSVFAGGKRVRPVLLLAACEAVGGELNSALPAACAMEMIHTYSLIHDDLPA 88
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D + PT + + T +L DA+L LL S N G G LRV+ E+
Sbjct: 89 MDNDDF-RRGNPTNHKVYGEATAILAGDALLTEAFILL--SCNGEGMEPGARLRVIHEIA 145
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETY--KKKEGRLHACGAACGAI 243
A GS+G+V GQ +++ G D++M +Y K G L GAI
Sbjct: 146 HASGSRGMVGGQMVDMES----------EGKHDIDMATLSYIHTHKTGALIRASVRAGAI 195
Query: 244 LGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLA 286
LGG +E+ + L RY +G+ I L EEL K A
Sbjct: 196 LGGANEETFDALTRYADAIGLAFQIADDVLDVEGTTEELGKDA 238
>gi|148239905|ref|YP_001225292.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7803]
gi|147848444|emb|CAK23995.1| Geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7803]
Length = 312
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 114/245 (46%), Gaps = 12/245 (4%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
SY E + L A+ + P + E MR+ + A + P LC+AACELVGG A
Sbjct: 25 SYLAKTRELVEQSLDAALGPERPESLRESMRYSLLAGGKRLRPILCLAACELVGGDASLA 84
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ A AL ++H S IH++LP D L + +PT + + +L DA+L E++
Sbjct: 85 MPTAVALEMIHTMSLIHDDLPAMDNDDL-RRGRPTNHKVYGDAMAILAGDALLSRAFEMV 143
Query: 164 ASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTY 223
A G R+L+V+ E++ G+ G+V GQ +L+ + D L Y
Sbjct: 144 AVRSE--GVPPERLLKVVAELSLVSGAPGLVGGQVVDLESEGREVDLETLE--------Y 193
Query: 224 ETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELK 283
K L AC GA++GG +++ +R Y +G+ IV L T + L
Sbjct: 194 IHLHKTAALLRAC-VVTGALIGGADASQVDAMRTYANGIGLAFQIVDDILDVTASSDVLG 252
Query: 284 KLAFK 288
K A K
Sbjct: 253 KTAGK 257
>gi|282901609|ref|ZP_06309527.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505]
gi|281193485|gb|EFA68464.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505]
Length = 309
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 111/235 (47%), Gaps = 12/235 (5%)
Query: 55 AHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMH 114
A L +++ + P +YE MR+ + A + P LC+A CE++GG E A+ A A+ ++H
Sbjct: 31 AALDKSIPLVYPETIYEAMRYSLLAGGKRVRPILCLATCEMIGGTIEMAMPTACAMEMIH 90
Query: 115 AASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNS 174
S IH++LP D + K T + + + +L D +L +L+A+ P
Sbjct: 91 TMSLIHDDLPAMDNDDY-RRGKLTNHKVYGEDVAILAGDGLLALSFQLVATQ-TPQTVPP 148
Query: 175 GRILRVMVEMTRAMGSQGVVEGQYNELQC-SQCDDDDRKLNGITDVEMTYETYKKKEGRL 233
R LRV+ M A G+ G+V GQ +L Q + LN I + K L
Sbjct: 149 ERTLRVIARMGSASGAPGLVGGQVVDLASEGQSNISLETLNFI---------HNHKTAAL 199
Query: 234 HACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
CG I+ G + ++I+ L RY +G+ I+ L T E+L K A K
Sbjct: 200 LEASVVCGGIIAGAAPQDIQKLTRYSQNIGLAFQIIDDILDITATKEQLGKTAGK 254
>gi|167040176|ref|YP_001663161.1| polyprenyl synthetase [Thermoanaerobacter sp. X514]
gi|300914259|ref|ZP_07131575.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561]
gi|307724505|ref|YP_003904256.1| polyprenyl synthetase [Thermoanaerobacter sp. X513]
gi|166854416|gb|ABY92825.1| Polyprenyl synthetase [Thermoanaerobacter sp. X514]
gi|300889194|gb|EFK84340.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561]
gi|307581566|gb|ADN54965.1| Polyprenyl synthetase [Thermoanaerobacter sp. X513]
Length = 294
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 116/249 (46%), Gaps = 21/249 (8%)
Query: 62 VVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHE 121
+ ++P +YE MR+ VFA + P LC+++CEL+GG ++A+ A A+ ++H S IH+
Sbjct: 23 IEEKPEIIYEAMRYSVFAGGKRLRPVLCLSSCELLGGDIKKALPVACAIELIHTYSLIHD 82
Query: 122 NLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVM 181
+LP D L + KPT + + +L D +L G E+L + RIL+
Sbjct: 83 DLPAMDNDDL-RRGKPTNHKVYGEAIAILAGDGLLNLGYEVLVRHALEHPEDYERILKAT 141
Query: 182 VEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYK----KKEGRLHACG 237
E+ A G +G++ GQ ++ SQ + ++TYE K K L
Sbjct: 142 NEIATASGCKGIIGGQVVDI-LSQ------------NTKLTYEELKFIHEHKTAALIEAS 188
Query: 238 AACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVNSFND 297
GA + G +E+++ LR Y +G I L E E+L K RE F
Sbjct: 189 VCAGAYIAGATEEDVHALREYARLIGFAFQIKDDILDVIGEEEKLGKKVGSDREKGKFTF 248
Query: 298 ENAEVIFSL 306
N IF L
Sbjct: 249 VN---IFEL 254
>gi|434386605|ref|YP_007097216.1| geranylgeranyl pyrophosphate synthase [Chamaesiphon minutus PCC
6605]
gi|428017595|gb|AFY93689.1| geranylgeranyl pyrophosphate synthase [Chamaesiphon minutus PCC
6605]
Length = 305
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 119/245 (48%), Gaps = 11/245 (4%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
+Y T I A L A+ P +Y+ MR+ + A + P LC+A+CEL+GG +
Sbjct: 17 AYLTERQPQIEAALDAAIRPGYPDTIYDAMRYSLLAGGKRLRPMLCLASCELIGGSLDSV 76
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ A AL ++H S IH++LP + K T + + + +L D +L + E +
Sbjct: 77 MPMACALEMVHTMSLIHDDLPAM-DDDDYRRGKLTNHKVYGEDIAILAGDGLLAYSFEYI 135
Query: 164 ASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTY 223
A+ G ++ R+L+ + + +A+G+ G+V GQ +L+ D I+ +TY
Sbjct: 136 ATQTQ--GVSADRVLKAIAHLAKAVGANGLVGGQVVDLESEGKPD-------ISVETLTY 186
Query: 224 ETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELK 283
K L AC CGAIL G +E ++E L ++ +G+ I+ L T EL
Sbjct: 187 IHNHKTGALLKAC-VVCGAILAGATEAQLEKLSKFAHNIGLAFQIIDDILDITATQAELG 245
Query: 284 KLAFK 288
K A K
Sbjct: 246 KTAGK 250
>gi|302819480|ref|XP_002991410.1| hypothetical protein SELMODRAFT_133501 [Selaginella moellendorffii]
gi|300140803|gb|EFJ07522.1| hypothetical protein SELMODRAFT_133501 [Selaginella moellendorffii]
Length = 328
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 132/270 (48%), Gaps = 20/270 (7%)
Query: 23 PSLSYRPMMVTMAMSTPNKN------KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHF 76
P + YR + + + + PNK KS + +V I L E ++++E MR+
Sbjct: 12 PRVQYRRIATSASSTKPNKFDYDLYVKSKFKAVSISIQHALPPPFKRPETLQLHEAMRYA 71
Query: 77 VFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSK 136
+ + M +C+AACELVGG ++ A+ A A+ ++ ++ + ++LP D L K
Sbjct: 72 LSQGRL-MCAIVCIAACELVGGSQDDAMPGACAVEMIKTSTCVQDDLPSIDNAEL-RDGK 129
Query: 137 PTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEG 196
PT++ AF T L A+L G E LA+ + G+ + R++ E++RA+GS G++ G
Sbjct: 130 PTVHCAFGIPTALFAGTALLVLGFEHLAA--HYRGDTAARMVG---EVSRAVGSTGLLAG 184
Query: 197 QYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLR 256
Q ++ ++E + K L GAI GG S+++IE LR
Sbjct: 185 QAVDMGIQNA-------GRAVELETLEFVHLHKTSALLEASLVIGAIAGGASDQDIEALR 237
Query: 257 RYGFYVGMIQGIVSRRLGPTEEIEELKKLA 286
YG G++ IV T+ EEL K+A
Sbjct: 238 AYGRVTGLLYQIVDDIADATKTTEELGKVA 267
>gi|33240579|ref|NP_875521.1| polyprenyl synthetase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|33238107|gb|AAQ00174.1| Geranylgeranyl pyrophosphate synthase [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
Length = 300
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 117/256 (45%), Gaps = 16/256 (6%)
Query: 35 AMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACE 94
A+ P +Y I + L ++ + P ++ E MR+ + A + P LC+AACE
Sbjct: 4 AVMFPFDFTAYLAKARTRIESALDASLGPERPNQLREAMRYSLLAGGKRLRPILCLAACE 63
Query: 95 LVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADA 154
L G E AI A A+ ++H S IH++LP D L + +PT + + +L DA
Sbjct: 64 LTGSDSENAISTAVAIEMIHTMSLIHDDLPSMDNDDL-RRGRPTNHKVYGEAIAILAGDA 122
Query: 155 MLPFGLELLA--SSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRK 212
+L E++A S + P R+L+V+ E++ G+ G+V GQ +L+
Sbjct: 123 LLTRAFEMVALRSPNVP----KDRLLKVVGELSLVAGAPGLVGGQVEDLESE-------- 170
Query: 213 LNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRR 272
D++ + K G L CGA++GG E + L Y +G+ IV
Sbjct: 171 -GKAVDLDTLEFIHIHKTGALLKASVVCGALIGGADEDLLIALSTYAKGIGLAFQIVDDI 229
Query: 273 LGPTEEIEELKKLAFK 288
L T E L K A K
Sbjct: 230 LDVTASSEVLGKTAGK 245
>gi|260893255|ref|YP_003239352.1| polyprenyl synthetase [Ammonifex degensii KC4]
gi|260865396|gb|ACX52502.1| Polyprenyl synthetase [Ammonifex degensii KC4]
Length = 286
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 109/223 (48%), Gaps = 12/223 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGH-REQAIVAAAALHVMHAASFIHENLP 124
P +++ MR+ V + PAL + A E VG E ++AA + ++H S +H++LP
Sbjct: 29 PHPIHQSMRYSVLGGGKRLRPALLLGAAEAVGADVAEDLLLAACGIELIHCYSLVHDDLP 88
Query: 125 LSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEM 184
D + +PT + F +L DA+L G ELLA + A S LRV+VE+
Sbjct: 89 AMDNDDF-RRGRPTSHRVFGEAIAILTGDALLTLGFELLARAALVARQGSEVGLRVIVEV 147
Query: 185 TRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAIL 244
RA GS+G+V GQ +L S+ D L E ++KK G L GA+L
Sbjct: 148 ARAAGSEGMVGGQVLDLGGSKNADPALLLE---------EIHRKKTGALFVAAVRAGALL 198
Query: 245 GGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAF 287
GG E+ ++ L Y +G+ IV L EE +L KL +
Sbjct: 199 GGAQEEALQKLTLYAEELGLAFQIVDDILDLDEE-AKLSKLTY 240
>gi|17227709|ref|NP_484257.1| geranylgeranyl diphosphate synthase [Nostoc sp. PCC 7120]
gi|17135191|dbj|BAB77737.1| geranylgeranyl diphosphate synthase [Nostoc sp. PCC 7120]
Length = 309
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 112/235 (47%), Gaps = 12/235 (5%)
Query: 55 AHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMH 114
A L A+ + P ++YE MR+ + A + P LC+A E++GG E A+ A A+ ++H
Sbjct: 31 AALDAAIPIIYPEKIYESMRYSLLAGGKRLRPILCLATSEMMGGTIEIAMPTACAVEMIH 90
Query: 115 AASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNS 174
S IH++LP D + T + + + +L D +L + E +A P
Sbjct: 91 TMSLIHDDLPAMDNDDY-RRGMLTNHKVYGEDIAILAGDGLLAYAFEFVAIR-TPESVPR 148
Query: 175 GRILRVMVEMTRAMGSQGVVEGQYNELQC-SQCDDDDRKLNGITDVEMTYETYKKKEGRL 233
R+L+V+ + RA+G+ G+V GQ +L + D LN I + K L
Sbjct: 149 DRVLQVVARLGRALGAAGLVGGQVVDLDSEGKSDTSLETLNFIHN--------HKTAALL 200
Query: 234 HACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
AC CG IL G S + ++ L RY +G+ I+ L T E+L K A K
Sbjct: 201 EAC-VVCGGILAGASSENVQRLSRYSQNIGLAFQIIDDILDITSTQEQLGKTAGK 254
>gi|308081242|ref|NP_001183930.1| putative geranylgeranyl pyrophosphate synthase 1 [Zea mays]
gi|148535919|gb|ABQ85646.1| putative geranylgeranyl pyrophosphate synthase 1 [Zea mays]
gi|414590653|tpg|DAA41224.1| TPA: hypothetical protein ZEAMMB73_231747 [Zea mays]
Length = 367
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 117/228 (51%), Gaps = 13/228 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P +++ MR+ + A + PALC+AAC +VGG A+ AAAA+ ++H S +H++LP
Sbjct: 92 PAALHDAMRYALLAGGKRVRPALCLAACAVVGGPEPWAMPAAAAVEMVHTMSLVHDDLPC 151
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLAS-----SDNPAGNNSGRILRV 180
D L + KPT + + +L DA+L +AS D + R++R
Sbjct: 152 MDDDDL-RRGKPTCHVVYGEPIAVLAGDALLSLSFHHMASVGSYPPDVDPEKHPARVVRA 210
Query: 181 MVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAAC 240
+ E+ R +GS+G+V GQ +L+ + + +E + K L
Sbjct: 211 IGELARCIGSEGLVAGQVVDLEMTGTSE-------TVPLERLEYIHLHKTAALLEASVVI 263
Query: 241 GAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GAI+GGG++++IE LR+Y +G++ +V L T+ EEL K A K
Sbjct: 264 GAIIGGGTDEQIERLRKYARSIGLLFQVVDDILDVTKSSEELGKTAGK 311
>gi|427701630|ref|YP_007044852.1| geranylgeranyl pyrophosphate synthase [Cyanobium gracile PCC 6307]
gi|427344798|gb|AFY27511.1| geranylgeranyl pyrophosphate synthase [Cyanobium gracile PCC 6307]
Length = 300
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 122/256 (47%), Gaps = 16/256 (6%)
Query: 35 AMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACE 94
A+ST +Y + + A L A+ + P + E MR+ + A + P L +AACE
Sbjct: 4 AVSTAFDFTAYLEAARWRVEAALESALGPERPESLREAMRYSLLAGGKRLRPILTLAACE 63
Query: 95 LVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADA 154
L GG + A+ A A+ ++H S IH++LP D L + +PT + + +L DA
Sbjct: 64 LAGGDADLAMPTAVAMEMIHTMSLIHDDLPAMDNDDL-RRGRPTNHKVYGEAKAILAGDA 122
Query: 155 MLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCS--QCDDDDRK 212
+L E++A G + R+L+V+ E++ A G+ G+V GQ +L+C Q D D
Sbjct: 123 LLTRAFEMVAL--RSPGVPAERLLQVVGELSLASGAPGLVGGQVVDLECEARQVDLD--- 177
Query: 213 LNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRR 272
+ Y K L AC GA++ G SE+ + LR Y +G+ I+
Sbjct: 178 -------TLEYIHLHKTGALLRAC-VISGALIAGASEELLTALRTYARGIGLAFQIIDDI 229
Query: 273 LGPTEEIEELKKLAFK 288
L T + L K A K
Sbjct: 230 LDVTASSDVLGKTAGK 245
>gi|297736851|emb|CBI26052.3| unnamed protein product [Vitis vinifera]
Length = 254
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 111/232 (47%), Gaps = 45/232 (19%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L A+ ++EP+E+++ MR+ + + P +C++ACELVGG A+ A+ ++H
Sbjct: 12 LDTAIPLREPLEIHKAMRYSLLDGGKRIHPIVCISACELVGGQESTAMPVVCAVEMLHVV 71
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGR 176
S + ++LP D I + KP+ + AF +
Sbjct: 72 SLMQDDLPCMDNDD-IRRGKPSNHKAFGES------------------------------ 100
Query: 177 ILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHAC 236
E+ R++GSQG+V GQ+ L S + L G+ + + K G L
Sbjct: 101 ------ELARSIGSQGLVAGQF--LDLSSEGSPEIGLEGLESIHIN------KAGPLLEA 146
Query: 237 GAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
A GA+LGGGS +++E+LR++G VG++ +V L T+ +EL K A K
Sbjct: 147 SAVIGAMLGGGSSEQMEILRKFGRCVGLLYQVVDDILDITKSTQELGKTAGK 198
>gi|148241850|ref|YP_001227007.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RCC307]
gi|147850160|emb|CAK27654.1| Geranylgeranyl pyrophosphate synthase [Synechococcus sp. RCC307]
Length = 300
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 109/227 (48%), Gaps = 16/227 (7%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
+ P + E MR+ + A + P LC+A+CEL GG A+ A AL ++H S IH++L
Sbjct: 33 ERPESLREAMRYSLLAGGKRLRPILCLASCELAGGDASLALPTATALEMIHTMSLIHDDL 92
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA--SSDNPAGNNSGRILRVM 181
P D L + +PT + + T +L DA+L E++A S D PA R+L+V+
Sbjct: 93 PAMDNDDL-RRGRPTNHKVYGDATAILAGDALLTRAFEMVALRSPDVPA----ERLLKVI 147
Query: 182 VEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACG 241
E++ A G+ G+V GQ +L + D++ + K G L G
Sbjct: 148 GELSLAAGAPGLVGGQIVDLASEGVE---------VDLDTLEYIHLHKTGALLQASVLSG 198
Query: 242 AILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
A++ G + +E LR Y +G+ I+ L T E L K A K
Sbjct: 199 ALIAGADDTLLEALRTYSRAIGLAFQIIDDILDVTASSEVLGKTAGK 245
>gi|253701624|ref|YP_003022813.1| polyprenyl synthetase [Geobacter sp. M21]
gi|251776474|gb|ACT19055.1| Polyprenyl synthetase [Geobacter sp. M21]
Length = 295
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 106/223 (47%), Gaps = 15/223 (6%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++ MR+ VFA + P L +AACE VGG + A+ AA A+ ++H S IH++LP
Sbjct: 29 PASLHGSMRYSVFAGGKRVRPVLLLAACEAVGGALKPALPAACAMEMIHTYSLIHDDLPA 88
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D + PT + + T +L DA+L LL S N G + LRV+ E+
Sbjct: 89 MDNDDF-RRGNPTNHKVYGEATAILAGDALLTEAFILL--SGNGEGVDPAARLRVIHEIA 145
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETY--KKKEGRLHACGAACGAI 243
A GS+G+V GQ +++ G D++M +Y K G L GAI
Sbjct: 146 HASGSRGMVGGQMVDMES----------EGKHDIDMATLSYIHTHKTGALIRASVRAGAI 195
Query: 244 LGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLA 286
LGG E+ + L RY +G+ I L EEL K A
Sbjct: 196 LGGADEEAFDALTRYADAIGLAFQIADDVLDVEGTTEELGKDA 238
>gi|427712083|ref|YP_007060707.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 6312]
gi|427376212|gb|AFY60164.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 6312]
Length = 314
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 114/246 (46%), Gaps = 19/246 (7%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K+Y + L ++ + P ++Y+ MR+ + A + P LC+A CEL+GG E
Sbjct: 25 KTYLQDRKALVEQALEASITITYPEKIYDSMRYSLLAGGKRLRPILCLATCELLGGTLEM 84
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ A AL ++H S IH++LP D + K T + + + +L D +L + E
Sbjct: 85 AMPTACALEMIHTMSLIHDDLPAMDNDDY-RRGKLTNHKVYGEDIAILAGDGLLAYAFEF 143
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+ +N G + ++L+V+ + A+ + G+V GQ +L+ GIT E+T
Sbjct: 144 VV--ENTVGVKAEKLLKVISRLGHAVAATGLVGGQVVDLES----------EGIT--EIT 189
Query: 223 YET----YKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEE 278
ET + K G L G +L G ++ L Y +G+ IV L T
Sbjct: 190 IETLNFIHSHKTGALLEASVLSGGLLAGAEGDAVQRLTNYARNIGLAFQIVDDVLDITST 249
Query: 279 IEELKK 284
EEL K
Sbjct: 250 QEELGK 255
>gi|113477591|ref|YP_723652.1| farnesyl-diphosphate synthase [Trichodesmium erythraeum IMS101]
gi|110168639|gb|ABG53179.1| farnesyl-diphosphate synthase [Trichodesmium erythraeum IMS101]
Length = 316
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 118/262 (45%), Gaps = 15/262 (5%)
Query: 29 PMMVTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPAL 88
PM+ + T +Y + L ++ + P ++YE MR+ + A + P L
Sbjct: 13 PMLPQFQIDTTFDLSNYLVERKALVEKALDNSIKIVYPEKIYEAMRYSLLAGGKRLRPIL 72
Query: 89 CVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTE 148
C+A CEL GG+ E A+ A AL ++H S IH++LP D + + T + + +
Sbjct: 73 CLATCELSGGNIEMAMPTACALEMIHTMSLIHDDLPSMDNDDY-RRGQLTNHKVYGEDIA 131
Query: 149 LLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDD 208
+L D +L + E + + ++L+V+ + +A G+ G+V GQ +L
Sbjct: 132 ILAGDGLLSYAFEFVVTQTKNVLPK--QVLQVIARLGKASGAAGLVGGQVVDLAS----- 184
Query: 209 DDRKLNGITDV--EMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQ 266
GI+ V + + + K G L CGAIL S+ + L RY +G+
Sbjct: 185 -----EGISQVSEKTLHFIHTHKTGALLEASVVCGAILADVSQANLYRLERYAQNIGLAF 239
Query: 267 GIVSRRLGPTEEIEELKKLAFK 288
IV L T EEL K A K
Sbjct: 240 QIVDDILDITATTEELGKTAGK 261
>gi|322418643|ref|YP_004197866.1| poluprenyl synthetase [Geobacter sp. M18]
gi|320125030|gb|ADW12590.1| Polyprenyl synthetase [Geobacter sp. M18]
Length = 295
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 107/223 (47%), Gaps = 15/223 (6%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++ MR+ VFA + P L +AACE VGG + + AA A+ ++H S IH++LP
Sbjct: 29 PASLHGAMRYSVFAGGKRVRPVLMLAACEAVGGSPQAVMPAACAMEMIHTYSLIHDDLPA 88
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D + PT + + T +L DA+L LL S N G + LRV+ E+
Sbjct: 89 MDNDDF-RRGNPTNHKVYGEATAILAGDALLTEAFILL--SANGEGGDPAARLRVIQEIA 145
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETY--KKKEGRLHACGAACGAI 243
A GS+G+V GQ +++ G DV++ +Y K G L GAI
Sbjct: 146 VASGSRGMVGGQVVDMES----------EGRHDVDLATLSYIHTHKTGALIRASVRSGAI 195
Query: 244 LGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLA 286
+GG SE++ + L RY +G+ I L EEL K A
Sbjct: 196 MGGASEEQFKALTRYADAIGLAFQIADDILDVEGTTEELGKDA 238
>gi|302769336|ref|XP_002968087.1| hypothetical protein SELMODRAFT_231100 [Selaginella moellendorffii]
gi|300163731|gb|EFJ30341.1| hypothetical protein SELMODRAFT_231100 [Selaginella moellendorffii]
Length = 261
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 114/217 (52%), Gaps = 14/217 (6%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
+++ MR+ V P C+AACELVGG ++ A+ A AL ++ A+ + ++LP D
Sbjct: 1 MHDAMRYAV-GGGRRTCPIACIAACELVGGTQDDAMPGACALEMIKASFCVQDDLPSIDD 59
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
+ L KPT++ AF T L A+L G E LA+ +G+ + R++ E+ RA+
Sbjct: 60 SEL-RHGKPTVHRAFGIPTALFAGTALLALGFEHLAA--RYSGDTAARMV---AEVGRAI 113
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
GS G++ GQ +L ++ DR + ++E + K L GAI GG S
Sbjct: 114 GSTGLLAGQAVDL---GIENPDRGV----ELETLEFVHLHKTSALLEASLVAGAIAGGAS 166
Query: 249 EKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKL 285
E+EIE LR YG G++ IV T+ +EEL K+
Sbjct: 167 EQEIEALRAYGRVTGLLYQIVDDVADATKTMEELGKI 203
>gi|94264970|ref|ZP_01288741.1| Polyprenyl synthetase [delta proteobacterium MLMS-1]
gi|93454573|gb|EAT04851.1| Polyprenyl synthetase [delta proteobacterium MLMS-1]
Length = 315
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 120/257 (46%), Gaps = 12/257 (4%)
Query: 32 VTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKE-PVEVY-EPMRHFVFAAPVNMAPALC 89
+T A T K Y + E + A L Q + ++ P+ + E MR+ + A + P LC
Sbjct: 12 LTRAKVTTLDIKQYLAAQRELVEAALEQLLPAEDGPLAAHIEAMRYSLLAGGKRVRPILC 71
Query: 90 VAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTEL 149
+AA E VG + + A AL +H S IH++LP D L + PT + F +
Sbjct: 72 LAAAEAVGSDPKPLLPVAGALECIHTYSLIHDDLPAMDNDDL-RRGMPTSHKKFGEAAAI 130
Query: 150 LVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDD 209
L D +L F ELLA G LR++ + A+G +G+V GQ +++ +
Sbjct: 131 LAGDGLLSFAFELLARPLGEHGPGPAAQLRLLATVAAAVGPRGMVGGQVLDIEA-----E 185
Query: 210 DRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIV 269
R+L +++ + ++ K G L GAI GG SE +++ L RYG G+ IV
Sbjct: 186 GRRL----ELDELQQIHRHKTGALITAAVQAGAIGGGASETQLQALTRYGQQTGLAFQIV 241
Query: 270 SRRLGPTEEIEELKKLA 286
L T + L K A
Sbjct: 242 DDLLNVTSDTATLGKAA 258
>gi|296133204|ref|YP_003640451.1| polyprenyl synthetase [Thermincola potens JR]
gi|296031782|gb|ADG82550.1| Polyprenyl synthetase [Thermincola potens JR]
Length = 299
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 112/223 (50%), Gaps = 18/223 (8%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P +++ MR+ + A + P L +AA E VGG ++ I AA A+ ++H S IH++LP
Sbjct: 32 PETIHQSMRYSMLAGGKRLRPVLVLAAAEAVGGDVKKVIPAACAIEMIHTYSLIHDDLPA 91
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D + + KPT + + +L DA+L E+L+S G + ++LRV+ E++
Sbjct: 92 MDDDNY-RRGKPTNHVVYGEAIAILAGDALLTLAFEVLSSLVEEPGIDPQKVLRVIKEIS 150
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYK----KKEGRLHACGAACG 241
A GS+G++ GQ ++ G +++++ ET K K G L G
Sbjct: 151 LAAGSRGLIGGQVVDI-------------GSENLDISAETLKYIHIHKTGALFKAALKTG 197
Query: 242 AILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
AIL SE++I L RY ++G+ I L + E+L K
Sbjct: 198 AILSSASEEQITALSRYAHFLGLGFQITDDILDIEGDTEKLGK 240
>gi|318040269|ref|ZP_07972225.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CB0101]
Length = 310
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 119/258 (46%), Gaps = 12/258 (4%)
Query: 31 MVTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCV 90
M A T +Y + + A L ++ + P + E MR+ + A + P LC+
Sbjct: 8 MTAAATMTSFDFAAYLEASRLKVEAALDGSLGPERPESLRESMRYSLLAGGKRLRPILCL 67
Query: 91 AACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELL 150
AACEL GG QA+ A AL ++H S IH++LP D L + PT + + +L
Sbjct: 68 AACELAGGDSAQAMPTAVALEMIHTMSLIHDDLPAMDNDDL-RRGMPTNHKVYGEANAIL 126
Query: 151 VADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDD 210
DA+L E++A G + ++L+V+ E++ A G+ G+V GQ +L+C + D
Sbjct: 127 AGDALLTRAFEMVAL--RSPGVPAEQLLKVVGELSLASGAPGLVGGQVVDLECEGKNVDL 184
Query: 211 RKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVS 270
L Y K L AC GA++ G + +E LR Y +G+ I+
Sbjct: 185 ETLE--------YIHLHKTGALLRAC-VLTGALIAGAPDALLEALRTYARGIGLAFQIID 235
Query: 271 RRLGPTEEIEELKKLAFK 288
L T E L K A K
Sbjct: 236 DILDVTASSEVLGKTAGK 253
>gi|126659033|ref|ZP_01730174.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. CCY0110]
gi|126619690|gb|EAZ90418.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. CCY0110]
Length = 309
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 130/282 (46%), Gaps = 26/282 (9%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
SY + + A L Q++ + P ++YE MR+ + A + P LC+ CEL+GG E +
Sbjct: 21 SYLKDKKQLVEAALDQSLPIIRPEKIYEAMRYSLLAGGKRLRPILCLTTCELMGGTVEMS 80
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ A AL ++H S IH++LP + K T + + + +L DA+L + E +
Sbjct: 81 LPTACALEMIHTMSLIHDDLPAM-DDDDYRRGKLTNHKVYGEDIAILAGDALLSYAFEYV 139
Query: 164 ASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTY 223
A+ + ++ V+ + R +G+ G+V GQ +L+ G DV T
Sbjct: 140 ATQTRNV--DLANLMNVIARLGRTVGAAGLVGGQVLDLES----------EGKLDV--TV 185
Query: 224 ETYK----KKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEI 279
+T K K G L GAIL G ++++E L RY +G+ I+ L T
Sbjct: 186 DTLKFIHIHKTGALLETSVVSGAILAGAKQEDVERLSRYAQNIGLAFQIIDDILDVTAST 245
Query: 280 EELKKLAFKLREVNSFN-------DENAEVIFSLVDDNITHV 314
EEL K A K + +E+ + +L+DD I V
Sbjct: 246 EELGKTAGKDQRDKKATYPSLWGLEESQKQAQALIDDAIAQV 287
>gi|87303385|ref|ZP_01086173.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 5701]
gi|87282033|gb|EAQ73995.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 5701]
Length = 300
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 120/257 (46%), Gaps = 12/257 (4%)
Query: 32 VTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVA 91
+ +A+ST +Y S + L A+ + P + E MR+ + A + P LC+A
Sbjct: 1 MAVAVSTEFDFAAYLESARGQVELALEAALGPERPESLREAMRYSLLAGGKRLRPILCLA 60
Query: 92 ACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLV 151
ACEL GG A+ A AL ++H S IH++LP D L + +PT + + +L
Sbjct: 61 ACELAGGEVALALPTAVALEMIHTMSLIHDDLPAMDNDDL-RRGRPTNHKVYGDAQAILA 119
Query: 152 ADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDR 211
DA+L E++A G + R+L+V+ E++ A G+ G+V GQ +L+ D D
Sbjct: 120 GDALLTRAFEMVAL--RSPGVPAERLLQVVGELSLAAGAPGLVGGQVVDLESEGKDVDLA 177
Query: 212 KLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSR 271
L Y K L AC GA++ G E ++ LR Y +G+ I+
Sbjct: 178 TLE--------YIHLHKTGALLQAC-VLTGAMIAGAPEPLLQGLRTYSRGIGLAFQIIDD 228
Query: 272 RLGPTEEIEELKKLAFK 288
L T E L K A K
Sbjct: 229 ILDVTASSEVLGKTAGK 245
>gi|88808953|ref|ZP_01124462.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7805]
gi|88786895|gb|EAR18053.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7805]
Length = 315
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 112/245 (45%), Gaps = 12/245 (4%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
+Y + L A+ + P + E MR+ + A + P LC+AACELVGG A
Sbjct: 28 AYLAKTRNLVEGALDAALGPERPESLRESMRYSLLAGGKRLRPILCLAACELVGGDASLA 87
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ A AL ++H S IH++LP D L + +PT + + +L DA+L E++
Sbjct: 88 MPTAVALEMIHTMSLIHDDLPAMDNDDL-RRGRPTNHKVYGDAMAILAGDALLSRAFEMV 146
Query: 164 ASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTY 223
S G R+L+V+ E+ G+ G+V GQ +L+ + D L Y
Sbjct: 147 --SLRSPGVPPERLLKVVAELALVSGAPGLVGGQVVDLESEGREVDLETLE--------Y 196
Query: 224 ETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELK 283
K L AC GA++GG ++E +R Y +G+ IV L T E L
Sbjct: 197 IHLHKTAALLRAC-VVTGALIGGADANQVEAMRTYANGIGLAFQIVDDILDVTASSEVLG 255
Query: 284 KLAFK 288
K A K
Sbjct: 256 KTAGK 260
>gi|22297564|ref|NP_680811.1| geranylgeranyl pyrophosphate synthase [Thermosynechococcus
elongatus BP-1]
gi|22293741|dbj|BAC07573.1| geranylgeranyl pyrophosphate synthase [Thermosynechococcus
elongatus BP-1]
Length = 307
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 115/248 (46%), Gaps = 15/248 (6%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K+Y + A L ++ V P ++Y+ MR+ + A + P LC+A CEL+GG E
Sbjct: 18 KAYLKERQALVEAALEASIPVAYPEKIYDAMRYSLMAGGKRLRPILCLATCELMGGTVEM 77
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ A AL ++H S IH++LP D + KPT + + + +L D +L + E
Sbjct: 78 AMPTACALEMIHTMSLIHDDLPAMDNDDY-RRGKPTNHKVYGEDIAILAGDGLLAYAFEY 136
Query: 163 LA--SSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVE 220
+ + + PA +L+++ + A+ + G+V GQ +L+C D +E
Sbjct: 137 VVEQTKNVPAEY----LLKIVARLGHAVAATGLVGGQVVDLECEGQPD--------IGLE 184
Query: 221 MTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
+ + K G L GA+L G E ++ L RY +G+ IV L T +
Sbjct: 185 TLHFIHSHKTGALLEASVVSGALLTGAHESDVARLSRYAANIGLAFQIVDDILDITSTRD 244
Query: 281 ELKKLAFK 288
L K K
Sbjct: 245 VLGKTVGK 252
>gi|5631295|dbj|BAA82613.1| geranylgeranyl diphosphate synthase (SelGGPS) [Synechococcus
elongatus]
Length = 307
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 115/248 (46%), Gaps = 15/248 (6%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K+Y + A L ++ V P ++Y+ MR+ + A + P LC+A CEL+GG E
Sbjct: 18 KAYLKERQALVEAALEASIPVAYPEKIYDAMRYSLMAGGKRLRPILCLATCELMGGTVEM 77
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ A AL ++H S IH++LP D + KPT + + + +L D +L + E
Sbjct: 78 AMPTACALEMIHTMSLIHDDLPAMDNDDY-RRGKPTNHKVYGEDIAILAGDGLLAYAFEY 136
Query: 163 LA--SSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVE 220
+ + + PA +L+++ + A+ + G+V GQ +L+C D +E
Sbjct: 137 VVEQTKNVPAEY----LLKIVARLGHAVAATGLVGGQVVDLECEGQPD--------IGLE 184
Query: 221 MTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
+ + K G L GA+L G E ++ L RY +G+ IV L T +
Sbjct: 185 TLHFIHSHKTGALLEASVVSGALLTGAHESDVARLSRYAANIGLAFQIVDDILDITSTRD 244
Query: 281 ELKKLAFK 288
L K K
Sbjct: 245 VLGKTVGK 252
>gi|260434296|ref|ZP_05788266.1| geranyltranstransferase [Synechococcus sp. WH 8109]
gi|260412170|gb|EEX05466.1| geranyltranstransferase [Synechococcus sp. WH 8109]
Length = 296
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 122/255 (47%), Gaps = 16/255 (6%)
Query: 36 MSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACEL 95
MS K+Y E + A L ++ + P + E MR+ + A + P LC+AACEL
Sbjct: 1 MSAEFDFKAYLGKAKERVEAALDGSLGPERPESLREAMRYSLLAGGKRLRPILCLAACEL 60
Query: 96 VGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAM 155
GG QA+ A AL ++H S IH++LP D L + +PT + + +L DA+
Sbjct: 61 AGGEATQALPTAVALEMIHTMSLIHDDLPAMDDDDL-RRGRPTNHKVYGEAVAILAGDAL 119
Query: 156 LPFGLELLA--SSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKL 213
L E++A S D PA R+L+V+ E++ G+ G+V GQ +L+ +
Sbjct: 120 LTRAFEMVALRSPDVPA----ERLLKVVGELSLVAGAPGLVGGQVVDLESEGKE------ 169
Query: 214 NGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRL 273
D+E + K G L + GAI+GG E I+ LR Y +G+ I+ L
Sbjct: 170 ---VDLETLEYIHLHKTGALLSACVITGAIIGGADEALIKALRTYARGIGLAFQIIDDIL 226
Query: 274 GPTEEIEELKKLAFK 288
T + L K A K
Sbjct: 227 DITASSDVLGKTAGK 241
>gi|323702778|ref|ZP_08114438.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574]
gi|333924276|ref|YP_004497856.1| polyprenyl synthetase [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323532295|gb|EGB22174.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574]
gi|333749837|gb|AEF94944.1| Polyprenyl synthetase [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 294
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 14/229 (6%)
Query: 36 MSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACEL 95
MS ++ KSY +V + + +L A V P ++E MR+ VFA + P L +AA E
Sbjct: 1 MSYQDQLKSYALAVDKALNEYLPAAEVY--PSTIHEAMRYSVFAGGKRLRPILTIAAAEA 58
Query: 96 VGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAM 155
VGG EQ + A AL ++H S +H++LP D + +PT + + +LV DA+
Sbjct: 59 VGGSMEQVMPVACALELIHTYSLVHDDLPAMDNDDF-RRGRPTNHKVYGEAMAILVGDAL 117
Query: 156 LPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNG 215
L E++A + + ++ +V +E+ RA GS G++ GQ D +
Sbjct: 118 LTQAFEVIAGTAVKVSPD--KVNQVTLEIARAAGSLGLIGGQVV---------DTLSEDQ 166
Query: 216 ITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
+ D ++ ++ K G L GAIL G S +E+ L Y +G+
Sbjct: 167 VIDGQVLEYIHRHKTGALFRVAVRAGAILSGASAEELAALTTYAEQMGL 215
>gi|77176929|gb|ABA64563.1| geranylgeranyl pyrophosphate synthase [Carica papaya]
Length = 214
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 98/179 (54%), Gaps = 15/179 (8%)
Query: 112 VMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAG 171
+MH S IH++LP D L + KPT + F + +L DA+L F E LA + G
Sbjct: 2 MMHTMSLIHDDLPCMDNDDL-RRGKPTNHKVFGEDVAVLAGDALLSFSFEHLAVA--TVG 58
Query: 172 NNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETY--KKK 229
+ RI+R + E+ +++G++G+V GQ ++ CS+ G+TDV + + + K
Sbjct: 59 VDPSRIVRAIKELAKSIGTEGLVAGQVVDI-CSE---------GMTDVGLEHLEFIHVHK 108
Query: 230 EGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
L GAILGGG+++EIE LR++ Y+G++ +V L T+ +EL K A K
Sbjct: 109 TAALLEAAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGK 167
>gi|297544572|ref|YP_003676874.1| polyprenyl synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296842347|gb|ADH60863.1| Polyprenyl synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 294
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 112/229 (48%), Gaps = 22/229 (9%)
Query: 62 VVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHE 121
V + P +YE M++ VFA + P LC+++CEL G ++A+ A A+ ++H S IH+
Sbjct: 23 VEENPQIIYEAMKYSVFAGGKRLRPVLCLSSCELFEGDIKKALPVACAIELIHTYSLIHD 82
Query: 122 NLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA--SSDNPAGNNSGRILR 179
+LP D L + KPT + + +L D +L E+L + +NP ++ RIL+
Sbjct: 83 DLPAMDNDDL-RRGKPTNHKVYGEAIAILAGDGLLNLAFEVLIRHALENP--HDYQRILK 139
Query: 180 VMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYK----KKEGRLHA 235
E+ RA G +G++ GQ ++ SQ + ++TYE K K G L
Sbjct: 140 ATDEIARASGCKGMIGGQVVDI-LSQ------------NTKLTYEELKFMHEHKTGALIE 186
Query: 236 CGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
GA + G E++I LR Y +G+ I L E E+L K
Sbjct: 187 ASVCAGAYIAGAIEEDIHALREYASLIGLAFQIKDDILDVIGEEEKLGK 235
>gi|289578292|ref|YP_003476919.1| Geranyltranstransferase [Thermoanaerobacter italicus Ab9]
gi|289528005|gb|ADD02357.1| Geranyltranstransferase [Thermoanaerobacter italicus Ab9]
Length = 294
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 112/229 (48%), Gaps = 22/229 (9%)
Query: 62 VVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHE 121
V + P +YE M++ VFA + P LC+++CEL G ++A+ A A+ ++H S IH+
Sbjct: 23 VEENPQIIYEAMKYSVFAGGKRLRPVLCLSSCELFEGDIKKALPVACAIELIHTYSLIHD 82
Query: 122 NLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA--SSDNPAGNNSGRILR 179
+LP D L + KPT + + +L D +L E+L + +NP ++ RIL+
Sbjct: 83 DLPAMDNDDL-RRGKPTNHKVYGEAIAILAGDGLLNLAFEVLIRHALENP--HDYQRILK 139
Query: 180 VMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYK----KKEGRLHA 235
E+ RA G +G++ GQ ++ SQ + ++TYE K K G L
Sbjct: 140 ATNEIARASGCKGMIGGQVVDI-LSQ------------NTKLTYEELKFMHEHKTGALIE 186
Query: 236 CGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
GA + G E++I LR Y +G+ I L E E+L K
Sbjct: 187 ASVCAGAYIAGAIEEDIHALREYASLIGLAFQIKDDILDVIGEEEKLGK 235
>gi|254423009|ref|ZP_05036727.1| polyprenyl synthetase superfamily [Synechococcus sp. PCC 7335]
gi|196190498|gb|EDX85462.1| polyprenyl synthetase superfamily [Synechococcus sp. PCC 7335]
Length = 307
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 122/259 (47%), Gaps = 16/259 (6%)
Query: 31 MVTMAMSTPNKN--KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPAL 88
M T + +P+ KSY + + A + A+ V P ++YE MR+ + A + P L
Sbjct: 1 MATTNLDSPSTFDLKSYLSDRSCQVEAAIDAALPVVYPEQIYEAMRYSLLAGGKRLRPIL 60
Query: 89 CVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTE 148
C+A CE++G A+ A AL ++H S IH++LP + K T + +
Sbjct: 61 CLATCEMLGASANIAMPTACALEMVHTMSLIHDDLPAM-DDDDYRRGKLTNHKVYGEGVA 119
Query: 149 LLVADAMLPFGLELLASSDNPAGNNSG---RILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
+L DA+L + E +A + P G++ IL+V+ ++ RA+G++G+V GQ +L
Sbjct: 120 VLAGDALLTYAFEHIA-TQTPQGSDGADPQHILKVVAQLGRAVGAEGLVGGQVVDLASEG 178
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
D+ L I + K L GA+L G SE ++ LRRY +G+
Sbjct: 179 TLVDEETLTFI---------HMHKTAALLEVSVTSGAMLAGASEAVVDRLRRYAQRIGLA 229
Query: 266 QGIVSRRLGPTEEIEELKK 284
IV L T E L K
Sbjct: 230 FQIVDDVLDITSTPETLGK 248
>gi|78213443|ref|YP_382222.1| farnesyl-diphosphate synthase [Synechococcus sp. CC9605]
gi|78197902|gb|ABB35667.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CC9605]
Length = 296
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 120/253 (47%), Gaps = 12/253 (4%)
Query: 36 MSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACEL 95
MS K+Y E + A L ++ + P + E MR+ + A + P LC+AACEL
Sbjct: 1 MSAEFDFKAYLGKAKEQVEAALDGSLGPERPESLREAMRYSLLAGGKRLRPILCLAACEL 60
Query: 96 VGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAM 155
GG QA+ A AL ++H S IH++LP D L + +PT + + +L DA+
Sbjct: 61 AGGEATQALPTAVALEMIHTMSLIHDDLPAMDDDDL-RRGRPTNHKVYGEAVAILAGDAL 119
Query: 156 LPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNG 215
L E++A G + R+L+V+ E++ G+ G+V GQ +L+ +
Sbjct: 120 LTRAFEMVAL--RSPGVPAERLLKVVGELSLVAGAPGLVGGQVVDLESEGKE-------- 169
Query: 216 ITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGP 275
D+E + K G L + GA++GG E I+ LR Y +G+ I+ L
Sbjct: 170 -VDLETLEYIHLHKTGALLSACVITGAMIGGADEALIKALRTYARGIGLAFQIIDDILDI 228
Query: 276 TEEIEELKKLAFK 288
T E L K A K
Sbjct: 229 TASSEVLGKTAGK 241
>gi|11467424|ref|NP_043281.1| prenyl transferase CrtE [Cyanophora paradoxa]
gi|1345836|sp|P48368.1|CRTE_CYAPA RecName: Full=Geranylgeranyl pyrophosphate synthase homolog;
Short=GGPP synthase; AltName:
Full=Farnesyltranstransferase
gi|1016225|gb|AAA81312.1| CrtE [Cyanophora paradoxa]
Length = 300
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 15/243 (6%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
+Y E + L +++ P +Y+ +R+ + A + P LC+A+CEL GG E A
Sbjct: 12 TYLYERKEIVEDTLNKSIPRGNPTFIYDSIRYSLSAGGKRIRPILCLASCELAGGTMEMA 71
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ A AL ++H S IH++LP D S + KPT + + + +L DA+L + E +
Sbjct: 72 LPTACALEMIHTMSLIHDDLPAMDNDSY-RRGKPTNHIIYGEDLAILAGDALLAYAFEFI 130
Query: 164 ASSDN--PAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEM 221
A+ PA I++V+ ++ ++ + G+V GQ +L D T +E
Sbjct: 131 ATQTKNVPA----DLIVKVIAQVAHSVTTSGLVGGQIIDLSSEGKSD--------TTLET 178
Query: 222 TYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEE 281
+ K G L GA+L G EK++ RY +G+ I+ L E+
Sbjct: 179 LNFIHIHKTGALLEAAVLSGALLAGAKEKDMNRFLRYAQNIGLAFQIIDDVLDIISTEEK 238
Query: 282 LKK 284
L K
Sbjct: 239 LGK 241
>gi|125558937|gb|EAZ04473.1| hypothetical protein OsI_26621 [Oryza sativa Indica Group]
Length = 366
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 117/228 (51%), Gaps = 13/228 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++E MR+ + A + PALC+AAC +VGG A+ AAAA+ ++H S +H++LP
Sbjct: 91 PAALHEAMRYALLAGGKRVRPALCLAACAVVGGREAWAMPAAAAVEMVHTMSLVHDDLPC 150
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDN-----PAGNNSGRILRV 180
D L + KPT + + +L DA+L +A D+ A + R++R
Sbjct: 151 MDDDDL-RRGKPTCHVVYGEPIAVLTGDALLSLSFHHMARFDSYPPDIDADKHPARVVRA 209
Query: 181 MVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAAC 240
+ E+ R +GS+G+V GQ +L+ + + +E + K L
Sbjct: 210 IGELARCIGSEGLVAGQVVDLEMTGSTE-------TVPLERLEYIHLHKTAALLEASVVI 262
Query: 241 GAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GAILGGGS+++IE LR Y +G++ +V L T+ EEL K A K
Sbjct: 263 GAILGGGSDEQIESLRMYARSIGLLFQVVDDILDVTKSSEELGKTAGK 310
>gi|284928678|ref|YP_003421200.1| farnesyl-diphosphate synthase [cyanobacterium UCYN-A]
gi|284809137|gb|ADB94842.1| farnesyl-diphosphate synthase [cyanobacterium UCYN-A]
Length = 309
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 121/249 (48%), Gaps = 13/249 (5%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
SY + + A L ++ + P ++YE MR+ + A + P LC+ CEL+GG E A
Sbjct: 21 SYLKEKKQLVEAALDASIPITCPEKIYEAMRYSLLAGGKRLRPILCLTTCELMGGTVEMA 80
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ A AL ++H S IH++LP D + + T + + + +L DA+L + E +
Sbjct: 81 LPTACALEMIHTMSLIHDDLPAMDNDDY-RRGQLTNHKVYGEDIAILAGDALLSYAFEHV 139
Query: 164 AS-SDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
A+ + N + N ++ V+ + R +G+ G+V GQ +L+ + K N +D+
Sbjct: 140 ATQTHNVSLTN---LVDVIARLGRTVGAAGLVGGQVLDLE------SEGKSNITSDILKF 190
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
+K G L GAIL G + ++IE L Y +G+ I+ L T EL
Sbjct: 191 IHVHKT--GALLETSVVSGAILAGANLEDIERLSHYAQNIGLAFQIIDDILDITSTQAEL 248
Query: 283 KKLAFKLRE 291
K A K ++
Sbjct: 249 GKTAGKDKQ 257
>gi|115473007|ref|NP_001060102.1| Os07g0580900 [Oryza sativa Japonica Group]
gi|33146837|dbj|BAC79826.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica
Group]
gi|50509220|dbj|BAD30490.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica
Group]
gi|113611638|dbj|BAF22016.1| Os07g0580900 [Oryza sativa Japonica Group]
gi|215767933|dbj|BAH00162.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768308|dbj|BAH00537.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 117/228 (51%), Gaps = 13/228 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++E MR+ + A + PALC+AAC +VGG A+ AAAA+ ++H S +H++LP
Sbjct: 91 PAALHEAMRYALLAGGKRVRPALCLAACAVVGGREAWAMPAAAAVEMVHTMSLVHDDLPC 150
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDN-----PAGNNSGRILRV 180
D L + KPT + + +L DA+L +A D+ A + R++R
Sbjct: 151 MDDDDL-RRGKPTCHVVYGEPIAVLTGDALLSLSFHHMARFDSYPPDIDADKHPARVVRA 209
Query: 181 MVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAAC 240
+ E+ R +GS+G+V GQ +L+ + + +E + K L
Sbjct: 210 IGELARCIGSEGLVAGQVVDLEMTGSTE-------TVPLERLEYIHLHKTAALLEASVVI 262
Query: 241 GAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GAILGGGS+++IE LR Y +G++ +V L T+ EEL K A K
Sbjct: 263 GAILGGGSDEQIESLRMYARSIGLLFQVVDDILDVTKSSEELGKTAGK 310
>gi|374993734|ref|YP_004969233.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus orientis
DSM 765]
gi|357212100|gb|AET66718.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus orientis
DSM 765]
Length = 288
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 96/196 (48%), Gaps = 13/196 (6%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
+ E MR+ + + P L +A+ E VGG E + AA AL ++H S IH++LP D
Sbjct: 27 INESMRYSLIGGGKRIRPVLALASAETVGGKPEAILQAAVALELIHTYSLIHDDLPAMDN 86
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
+ + + + F +L DA+L + ELL + D+ R+LRV+ E+ A
Sbjct: 87 DD-YRRGRLSNHKVFGEAQAILAGDALLTYAFELLGNLDHA---QPERLLRVITEVAMAA 142
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
G G+V GQ +L + D LN I E +K K G + A G ILGGGS
Sbjct: 143 GKDGMVGGQVLDL---AGEGRDLTLNEIE------EIHKAKTGAILTVSARLGGILGGGS 193
Query: 249 EKEIELLRRYGFYVGM 264
E EI+ L Y +G+
Sbjct: 194 EDEIDALTEYAQSLGL 209
>gi|317970425|ref|ZP_07971815.1| polyprenyl synthetase [Synechococcus sp. CB0205]
Length = 312
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 114/245 (46%), Gaps = 12/245 (4%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
+Y S + + L ++ + P + E MR+ + A + P LC+AACEL GG A
Sbjct: 23 AYLESSRQQVEQALDGSLGPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGDAALA 82
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ A AL ++H S IH++LP D L + PT + + +L DA+L E++
Sbjct: 83 MPTAVALEMIHTMSLIHDDLPAMDNDDL-RRGMPTNHKVYGEANAILAGDALLTRAFEMV 141
Query: 164 ASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTY 223
A G + ++++V+ E++ A G+ G+V GQ +L+C D D+E
Sbjct: 142 AL--RSPGVPAEQLIKVVGELSLASGAPGLVGGQVVDLECEGKD---------VDLETLE 190
Query: 224 ETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELK 283
+ K G L GA++ G SE + L Y +G+ I+ L T E L
Sbjct: 191 YIHLHKTGALLRSCVLTGALIAGASEALLAALTTYARGIGLAFQIIDDILDVTASSEVLG 250
Query: 284 KLAFK 288
K A K
Sbjct: 251 KTAGK 255
>gi|428177866|gb|EKX46744.1| hypothetical protein GUITHDRAFT_157722 [Guillardia theta CCMP2712]
Length = 303
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 105/220 (47%), Gaps = 11/220 (5%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
V+E MR+ + A + P L +AACE++GG E A+ A A ++H S IH++LP D
Sbjct: 40 VHESMRYSLMAGGKRIRPILTLAACEMMGGTEEMAMPTALAAEMIHTMSLIHDDLPCMDN 99
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
L + KPT + F + +L D +L + E +A G R+L V+ + +
Sbjct: 100 DDL-RRGKPTNHKVFGDDIAVLAGDGLLSYSFEYIARYTK--GVAPERVLDVIARCGKCV 156
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
G+ G+V GQ ++Q D +E ++ K L G ILGG +
Sbjct: 157 GALGLVGGQVVDIQSEGKKD--------VTIETLQWIHEHKTAALLEFCVVGGGILGGAN 208
Query: 249 EKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
E++I+ L ++ +G+ I+ L T++ L K A K
Sbjct: 209 EEQIQRLSKFAMNIGLSFQIIDDILDVTQDSATLGKTAGK 248
>gi|282895575|ref|ZP_06303709.1| Polyprenyl synthetase [Raphidiopsis brookii D9]
gi|281199415|gb|EFA74279.1| Polyprenyl synthetase [Raphidiopsis brookii D9]
Length = 309
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 109/235 (46%), Gaps = 12/235 (5%)
Query: 55 AHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMH 114
A L +++ + P ++YE MR+ + A + P LC+A CE++GG A+ A A+ ++H
Sbjct: 31 AALDKSIPLVYPEKIYEAMRYSLLAGGKRVRPILCLATCEMIGGTIGMAMPTACAMEMIH 90
Query: 115 AASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNS 174
S IH++LP D + K T + + + +L D +L E +A+ P
Sbjct: 91 TMSLIHDDLPAMDNDDY-RRGKLTNHKVYGEDVAILAGDGLLALSFEFVATQ-TPQTVPP 148
Query: 175 GRILRVMVEMTRAMGSQGVVEGQYNELQC-SQCDDDDRKLNGITDVEMTYETYKKKEGRL 233
R L+V+ M A G+ G+V GQ +L Q + LN I + K L
Sbjct: 149 DRTLQVIARMGSASGAPGLVGGQVVDLASEGQSNISLETLNFI---------HNHKTAAL 199
Query: 234 HACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
CG I+ G S ++I+ L Y +G+ I+ L T E+L K A K
Sbjct: 200 LEASVVCGGIIAGASPQDIQKLTCYSQNIGLAFQIIDDILDITATKEQLGKTAGK 254
>gi|158337967|ref|YP_001519143.1| geranylgeranyl diphosphate synthase [Acaryochloris marina
MBIC11017]
gi|158308208|gb|ABW29825.1| geranylgeranyl diphosphate synthase [Acaryochloris marina
MBIC11017]
Length = 301
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 118/257 (45%), Gaps = 15/257 (5%)
Query: 36 MSTPNKNK----SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVA 91
MS P + Y + E + A L ++ V P ++YE MR+ + A + P LC+A
Sbjct: 1 MSAPTPSNFNLVDYLSQRRELVEAALDASIPVVYPEKIYEAMRYSLLAGGKRLRPILCLA 60
Query: 92 ACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLV 151
ACEL GG E A+ A AL ++H S IH++LP D + KPT + + + +L
Sbjct: 61 ACELAGGTIEMAMPTACALEMIHTMSLIHDDLPAMDNDDF-RRGKPTNHKKYGEDIAILA 119
Query: 152 ADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDR 211
D +L + E +A ++L+V+ + A+ + G+V GQ +L+ +D
Sbjct: 120 GDGLLAYAYEHVAIETQQVPPE--QVLKVVARLGHAVAATGLVGGQVVDLESEGAED--- 174
Query: 212 KLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSR 271
+T + + + K G L GA L G S+ + ++ +G+ I+
Sbjct: 175 ----VTLSTLNF-IHAHKTGALLEASVLSGAELAGASQDLLNRCSKFARNIGLAFQIIDD 229
Query: 272 RLGPTEEIEELKKLAFK 288
L T E+L K A K
Sbjct: 230 VLDVTATSEKLGKTAGK 246
>gi|33865276|ref|NP_896835.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 8102]
gi|33632445|emb|CAE07257.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 8102]
Length = 309
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 125/266 (46%), Gaps = 21/266 (7%)
Query: 32 VTMAMSTPNKN---------KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPV 82
+T+A ++P+ K+Y + L Q++V + P + E MR+ + A
Sbjct: 1 MTVAATSPDNTSGLADIFDFKAYLAKAKATVEQALDQSLVPERPESLREAMRYSLLAGGK 60
Query: 83 NMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHA 142
+ P LC+AACEL GG QA+ A AL ++H S IH++LP D L + +PT +
Sbjct: 61 RLRPILCLAACELAGGDAAQAMPTAVALEMIHTMSLIHDDLPAMDDDDL-RRGRPTNHKV 119
Query: 143 FKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQ 202
+ +L DA+L E++A G R+L+V+ E++ G+ G+V GQ +L+
Sbjct: 120 YGEAVAILAGDALLTRAFEMVAL--RSPGVPPERLLKVVGELSLVAGAPGLVGGQVVDLE 177
Query: 203 CSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYV 262
+ D+E + K G L + GA++GG ++ I LR Y +
Sbjct: 178 SEGKE---------VDLETLEYIHLHKTGALLSACVITGAMIGGADDELIAALRVYARGI 228
Query: 263 GMIQGIVSRRLGPTEEIEELKKLAFK 288
G+ I+ L T E L K A K
Sbjct: 229 GLAFQIIDDILDITASSEVLGKTAGK 254
>gi|85859630|ref|YP_461832.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
pyrophosphate synthetase [Syntrophus aciditrophicus SB]
gi|85722721|gb|ABC77664.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
pyrophosphate synthetase [Syntrophus aciditrophicus SB]
Length = 308
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 99/204 (48%), Gaps = 12/204 (5%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGH--REQAIVAAAALHVMHAASFIHE 121
+ P E+++ MR+ +FA + P LC+AA E VG + + A AL +H S IH+
Sbjct: 37 ESPGELFKAMRYSLFAGGKRIRPILCLAAAEAVGTSVSSDCLLPVACALEYIHTYSLIHD 96
Query: 122 NLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVM 181
+LP D + KPT + F +L DA+L EL+ +D G +LRV+
Sbjct: 97 DLPAMDNDD-YRRGKPTSHKVFGDALAILAGDALLTEAFELMTRTDFHTGLAPEILLRVI 155
Query: 182 VEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACG 241
E+ A G+ G+V GQ +L+ + LN I + +K G + G
Sbjct: 156 REIAAAAGAFGMVGGQVEDLRAEGKPGNLDTLNRI---------HNRKTGAMIVVSLRAG 206
Query: 242 AILGGGSEKEIELLRRYGFYVGMI 265
AIL GGSE+ + L YG +G++
Sbjct: 207 AILSGGSEQAVSALTDYGHKIGLV 230
>gi|78779464|ref|YP_397576.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9312]
gi|78712963|gb|ABB50140.1| farnesyl-diphosphate synthase [Prochlorococcus marinus str. MIT
9312]
Length = 300
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 121/257 (47%), Gaps = 12/257 (4%)
Query: 32 VTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVA 91
+T A+S + + Y + + + L ++ + P + E MR+ + A + P LC+A
Sbjct: 1 MTEAISNISDFEEYLKNAKKVVEEALDFSLGPENPEILRESMRYSLLAGGKRIRPILCLA 60
Query: 92 ACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLV 151
+C L GG A+ A A+ ++H S IH++LP D L + +PT + + +L
Sbjct: 61 SCSLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDL-RRGRPTNHKVYGDAIAILA 119
Query: 152 ADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDR 211
DA+L E++ S G + R+L V+ E++ G+ G+V GQ +L+C +
Sbjct: 120 GDALLTRAFEMV--SLRSPGVDPTRLLNVIGELSLVAGAPGLVGGQVVDLECEGKE---- 173
Query: 212 KLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSR 271
D+E + K G L GA++ G +E+ ++ L Y +G+ I+
Sbjct: 174 -----VDLETLEYIHLHKTGALLKACVRTGAMIAGANEETLQALTTYAEGIGLAFQIIDD 228
Query: 272 RLGPTEEIEELKKLAFK 288
L T E+L K A K
Sbjct: 229 ILDLTSSSEKLGKTAGK 245
>gi|359458569|ref|ZP_09247132.1| geranylgeranyl diphosphate synthase [Acaryochloris sp. CCMEE 5410]
Length = 316
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 15/260 (5%)
Query: 33 TMAMSTPNKNK----SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPAL 88
T +S P + Y + E + A L ++ V P ++YE MR+ + A + P L
Sbjct: 13 TQDLSAPTPSNFNLVDYLSQRRELVEAALDASIPVVYPEKIYEAMRYSLMAGGKRLRPIL 72
Query: 89 CVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTE 148
C+AACEL GG E A+ A AL ++H S IH++LP D + KPT + + +
Sbjct: 73 CLAACELAGGTIEMAMPTACALEMIHTMSLIHDDLPAMDNDDF-RRGKPTNHKKYGEDIA 131
Query: 149 LLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDD 208
+L D +L + E +A ++L+V+ + A+ + G+V GQ +L+ +D
Sbjct: 132 ILAGDGLLAYAYEHVAIQTQQVPPE--QVLKVVARLGHAVAATGLVGGQVVDLESEGAED 189
Query: 209 DDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGI 268
+T + + + K G L GA L G ++ ++ ++ +G+ I
Sbjct: 190 -------VTLSTLNF-IHAHKTGALLEASVLSGAELAGANQDLLDRCSKFARNIGLAFQI 241
Query: 269 VSRRLGPTEEIEELKKLAFK 288
+ L T E+L K A K
Sbjct: 242 IDDVLDVTATSEKLGKTAGK 261
>gi|33861626|ref|NP_893187.1| polyprenyl synthetase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
gi|33634203|emb|CAE19529.1| Polyprenyl synthetase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 300
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 114/246 (46%), Gaps = 12/246 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
+ Y T + + L ++ + P + E MR+ + A + P LC+A+C L GG
Sbjct: 12 EKYLTDTKKVVEEALDFSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGEPSL 71
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ A A+ ++H S IH++LP D + +PT + + +L DA+L E+
Sbjct: 72 AVPTAVAIEMIHTMSLIHDDLPAMDNDGF-RRGRPTNHKVYGDAIAILAGDALLTRAFEM 130
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+ S G +S R+L V+ E++ G+ G+V GQ +L+C + D+E
Sbjct: 131 V--SLRSPGVDSNRLLNVVGELSLVAGAPGLVGGQVVDLECEGKE---------VDLETL 179
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
+ K G L GA++ G +E+ + L Y +G+ I+ L T E+L
Sbjct: 180 EYIHLHKTGALLKASVRTGAMIAGANEELLNALTTYAEGIGLAFQIIDDILDLTSSSEKL 239
Query: 283 KKLAFK 288
K A K
Sbjct: 240 GKTAGK 245
>gi|157413540|ref|YP_001484406.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9215]
gi|157388115|gb|ABV50820.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9215]
Length = 300
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 106/223 (47%), Gaps = 12/223 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P + E MR+ + A + P LC+A+C L GG A+ A A+ ++H S IH++LP
Sbjct: 35 PEILRESMRYSLLAGGKRIRPILCLASCSLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPA 94
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D L + +PT + + +L DA+L E++ S G + R+L V+ E++
Sbjct: 95 MDNDDL-RRGRPTNHKVYGDAIAILAGDALLTRAFEMV--SLRSPGVDPTRLLNVIGELS 151
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
G+ G+V GQ +L+C + D+E + K G L GA++
Sbjct: 152 LVAGAPGLVGGQVVDLECEGKE---------VDLETLEYIHLHKTGALLKACVRTGAMIA 202
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
G +EK ++ L Y +G+ I+ L T E+L K A K
Sbjct: 203 GANEKLLQALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGK 245
>gi|254526220|ref|ZP_05138272.1| geranylgeranyl pyrophosphate synthetase [Prochlorococcus marinus
str. MIT 9202]
gi|221537644|gb|EEE40097.1| geranylgeranyl pyrophosphate synthetase [Prochlorococcus marinus
str. MIT 9202]
Length = 300
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 106/223 (47%), Gaps = 12/223 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P + E MR+ + A + P LC+A+C L GG A+ A A+ ++H S IH++LP
Sbjct: 35 PEILRESMRYSLLAGGKRIRPILCLASCSLAGGKPSLAVPTAVAIEMIHTMSLIHDDLPA 94
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D L + +PT + + +L DA+L E++ S G + R+L V+ E++
Sbjct: 95 MDNDDL-RRGRPTNHKVYGDAIAILAGDALLTRAFEMV--SLRSPGVDPTRLLNVIGELS 151
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
G+ G+V GQ +L+C + D+E + K G L GA++
Sbjct: 152 LVAGAPGLVGGQVVDLECEGKE---------VDLETLEYIHLHKTGALLKACVRTGAMIA 202
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
G +EK ++ L Y +G+ I+ L T E+L K A K
Sbjct: 203 GANEKLLQALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGK 245
>gi|223997332|ref|XP_002288339.1| geranylgeranyl pyrophosphate synthetase [Thalassiosira pseudonana
CCMP1335]
gi|220975447|gb|EED93775.1| geranylgeranyl pyrophosphate synthetase [Thalassiosira pseudonana
CCMP1335]
Length = 339
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 109/221 (49%), Gaps = 11/221 (4%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
++ E M + + A + P LC+AACE+ GG ++ A+ A AL ++H S IH++LP D
Sbjct: 75 KICESMAYSLMAGGKRIRPVLCIAACEMFGGSQDVAMPTAVALEMIHTMSLIHDDLPSMD 134
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
L + KPT + F + +L D++L E +A G ++ +I+ V+ + ++
Sbjct: 135 NDDL-RRGKPTNHVVFGEDVAILAGDSLLSTSFEHVARETK--GVSAEKIVDVIARLGKS 191
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
+G++G+ GQ +L+C G T ++ + + K L A GA+LGG
Sbjct: 192 VGAEGLAGGQVMDLEC-------EAKPGTTLDDLKW-IHIHKTATLLQVAVASGAVLGGA 243
Query: 248 SEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
+ +E+ + +G+ + L T E+L K A K
Sbjct: 244 TPEEVAACELFAMNIGLAFQVADDILDVTASSEDLGKTAGK 284
>gi|126696514|ref|YP_001091400.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9301]
gi|126543557|gb|ABO17799.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9301]
Length = 299
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 106/223 (47%), Gaps = 12/223 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P + E MR+ + A + P LC+A+C L GG A+ A A+ ++H S IH++LP
Sbjct: 34 PEILRESMRYSLLAGGKRIRPILCLASCSLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPA 93
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D L + +PT + + +L DA+L E++ S G + R+L V+ E++
Sbjct: 94 MDNDDL-RRGRPTNHKVYGDAVAILAGDALLTRAFEMV--SLRSPGVDPNRLLNVIGELS 150
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
G+ G+V GQ +L+C + D++ + K G L GA++
Sbjct: 151 LVAGAPGLVGGQVVDLECEGKE---------VDLDTLEYIHLHKTGALLKACVRTGAMIA 201
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
G +EK ++ L Y +G+ I+ L T E+L K A K
Sbjct: 202 GANEKLLQALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGK 244
>gi|339319330|ref|YP_004679025.1| geranyltranstransferase [Candidatus Midichloria mitochondrii
IricVA]
gi|338225455|gb|AEI88339.1| geranyltranstransferase [Candidatus Midichloria mitochondrii
IricVA]
Length = 284
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 116/251 (46%), Gaps = 39/251 (15%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
++E +R+ +A + L V ++ +REQ++ AAA+ ++H S IH++LP D
Sbjct: 34 LFEAIRYSAISASKKIRGFLLVKTADIFNVNREQSLKIAAAIEMIHTYSLIHDDLPAMDD 93
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV--EMTR 186
+ KP+ + F +L DA+L + E++AS N ILR+ + E+TR
Sbjct: 94 GDY-RRGKPSCHKEFGEAMGILAGDALLTYAFEVIASDQ----ANIDPILRIKIIQEITR 148
Query: 187 AMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGG 246
A+G +G++ GQ ++ DD K E +K K G L GAI+G
Sbjct: 149 AIGIKGMIGGQVIDITSQNMSSDDLK-----------EVHKLKTGALIEASCVAGAIMGH 197
Query: 247 GSEKEIELLRRYGFYVGMIQGIVSRRLGP--------------------TEEIEELKKLA 286
S E+ + R Y +G+I +V + EEIEELK+ A
Sbjct: 198 ASSDEMLVFREYAGKLGLIFQMVDDLIDEEDDRENANANLLNLMPIVKIKEEIEELKRAA 257
Query: 287 FK-LREVNSFN 296
+ L+ +N+ N
Sbjct: 258 IQGLKNLNNHN 268
>gi|167628424|ref|YP_001678923.1| geranylgeranyl pyrophosphate synthase [Heliobacterium modesticaldum
Ice1]
gi|167591164|gb|ABZ82912.1| geranylgeranyl pyrophosphate synthase [Heliobacterium modesticaldum
Ice1]
Length = 296
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 98/199 (49%), Gaps = 10/199 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P +++ MR+ +FA + P L +A C VGG E + AA AL ++H S IH++LP
Sbjct: 29 PPVIHKAMRYSLFAGGKRLRPVLVLAGCRAVGGDEESVMAAACALEMIHTYSLIHDDLPA 88
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D L + PT + F T +L D +L +LA G + +L+V+ E+
Sbjct: 89 MDDDDL-RRGMPTNHVVFGEATAILAGDGLLTRAFGVLAEEGLRCGRSPALVLQVIAELA 147
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
A GS G++ GQ +++ N DV + K G L GA+LG
Sbjct: 148 DAAGSMGMIGGQVMDMESE---------NKQIDVATMAYIHAHKTGALIRASLRIGALLG 198
Query: 246 GGSEKEIELLRRYGFYVGM 264
GGS +++E L RYG ++G+
Sbjct: 199 GGSVEQVEALSRYGDHLGL 217
>gi|123968708|ref|YP_001009566.1| polyprenyl synthetase [Prochlorococcus marinus str. AS9601]
gi|123198818|gb|ABM70459.1| Polyprenyl synthetase [Prochlorococcus marinus str. AS9601]
Length = 300
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 12/223 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P + E MR+ + A + P LC+A+C L GG A+ A A+ ++H S IH++LP
Sbjct: 35 PEILRESMRYSLLAGGKRIRPILCLASCSLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPA 94
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D L + +PT + + +L DA+L E++ S G + R+L V+ E++
Sbjct: 95 MDNDDL-RRGRPTNHKVYGDAIAILAGDALLTRAFEMV--SLRSPGVDPTRLLNVVGELS 151
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
G+ G+V GQ +L+C + D + L Y K L AC GA++
Sbjct: 152 LVAGAPGLVGGQVVDLECEGKEVDLKTLE--------YIHLHKTGALLKAC-VRTGAMIA 202
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
G +EK + L Y +G+ I+ L T E+L K A K
Sbjct: 203 GANEKLLHALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGK 245
>gi|254431687|ref|ZP_05045390.1| polyprenyl synthetase [Cyanobium sp. PCC 7001]
gi|197626140|gb|EDY38699.1| polyprenyl synthetase [Cyanobium sp. PCC 7001]
Length = 321
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 116/245 (47%), Gaps = 12/245 (4%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
+Y + + A L A+ + P + E MR+ + A + P LC+AACEL GG E+A
Sbjct: 32 AYLEAARLRVEAALDAALGPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGESERA 91
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ A AL ++H S IH++LP D L + +PT + + +L DA+L E++
Sbjct: 92 MPTAVALEMIHTMSLIHDDLPAMDDDDL-RRGRPTNHKVYGEANAILAGDALLTRAFEMV 150
Query: 164 ASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTY 223
A + G R+L V+ E++ A G+ G+V GQ +L+C D L Y
Sbjct: 151 ALRSS--GVPPERLLAVVGELSLASGAPGLVGGQVVDLECEGKTVDLDTLE--------Y 200
Query: 224 ETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELK 283
K L AC CGA++ G + + LR Y +G+ I+ L T E L
Sbjct: 201 IHLHKTGALLRAC-VLCGALIAGAPDALLTALRTYARGIGLAFQIIDDILDVTASSEVLG 259
Query: 284 KLAFK 288
K A K
Sbjct: 260 KTAGK 264
>gi|375332057|gb|AFA52568.1| farnesyltransferase [Vaucheria litorea]
Length = 349
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 123/272 (45%), Gaps = 13/272 (4%)
Query: 24 SLSYRPMMVTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVV--KEPVEVYEPMRHFVFAAP 81
S+S + + ST K Y + L + +V E ++ E M + + A
Sbjct: 39 SISLKQSVAPATSSTTFDIKKYLYEKKVIVDKALSECIVPIGAENEKLCESMNYSLLAGG 98
Query: 82 VNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYH 141
+ P LC+A+ E+ GG E + A AL ++H+ S +H++LP D L + KPT +
Sbjct: 99 KRVRPILCIASSEIFGGEIESTLPTALALEMIHSMSLVHDDLPAMDNDDL-RRGKPTNHV 157
Query: 142 AFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNEL 201
+ +L DA+L E++A + G ++ R++ V+ + +G G+ GQ +L
Sbjct: 158 VYGEALAILAGDALLSKSFEIVAK--HTKGVDAERVVDVLARLGECVGEVGLAGGQAMDL 215
Query: 202 QCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFY 261
+ +D T +E +K K G L GA+LGG E+E + R+
Sbjct: 216 ELEGKED--------TTLEQLRWIHKHKTGALLKAACTTGAVLGGAEPSEVEAIERFSES 267
Query: 262 VGMIQGIVSRRLGPTEEIEELKKLAFKLREVN 293
+G+ + L T+ E+L K A K V+
Sbjct: 268 IGLAFQVADDILDCTQTSEQLGKTAGKDEAVS 299
>gi|452824591|gb|EME31593.1| geranylgeranyl pyrophosphate synthetase [Galdieria sulphuraria]
Length = 370
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 126/275 (45%), Gaps = 16/275 (5%)
Query: 14 VAPRRNHSRPSLSYRPMMVTMA--MSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVE--V 69
V+P+ N Y P+++ M +S + + + I L +++ + +P +
Sbjct: 49 VSPQGNRME-RCKYYPLLLCMVAEVSVSDNLLQFMKRKKDYIEEQLNRSIPLLDPRLGLI 107
Query: 70 YEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRT 129
YE MR+ + A + P LC+A CEL GG A A AL ++H S IH++LP D
Sbjct: 108 YESMRYSLLAGGKRIRPMLCIATCELFGGSTLTATPTAVALEMIHTMSLIHDDLPAMDND 167
Query: 130 SLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMG 189
+ K T + F + +L DA+L E +A + G + +L+V+ + ++G
Sbjct: 168 DY-RRGKLTNHKVFGEDIAILAGDALLARAFEYIA--NETQGVPAEVVLKVISFLGASVG 224
Query: 190 SQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSE 249
G+V GQ ++ + +K I D+ +K K G L C GA+LGG E
Sbjct: 225 YSGIVGGQVVDIL-----SEGKKEVSIDDL---IWIHKHKTGALLKCCVVTGALLGGAKE 276
Query: 250 KEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
+++ + + +G+ + L T EEL K
Sbjct: 277 EDVIRVGEFAERIGLAFQVADDILDVTASFEELGK 311
>gi|242050680|ref|XP_002463084.1| hypothetical protein SORBIDRAFT_02g037510 [Sorghum bicolor]
gi|241926461|gb|EER99605.1| hypothetical protein SORBIDRAFT_02g037510 [Sorghum bicolor]
Length = 371
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 117/228 (51%), Gaps = 13/228 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P +++ MR+ + A + PALC+AAC +VGG A+ AAAA+ ++H S +H++LP
Sbjct: 96 PAALHDAMRYALLAGGKRVRPALCLAACAVVGGPEAWAMPAAAAVEMVHTMSLVHDDLPC 155
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLAS-----SDNPAGNNSGRILRV 180
D L + KPT + + +L DA+L +AS D + R++R
Sbjct: 156 MDDDDL-RRGKPTCHVVYGEPIAVLAGDALLSLSFHHMASVGSYPPDVDPEKHPARVVRA 214
Query: 181 MVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAAC 240
+ E+ R +GS+G+V GQ +L+ + + +E + K L
Sbjct: 215 IGELARCIGSEGLVAGQVVDLEMTGTSEP-------VPLERLEYIHLHKTAALLEASVVI 267
Query: 241 GAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GAI+GGG++++IE LR+Y +G++ +V L T+ EEL K A K
Sbjct: 268 GAIIGGGTDEQIERLRKYARSIGLLFQVVDDILDVTKSSEELGKTAGK 315
>gi|325290005|ref|YP_004266186.1| farnesyl-diphosphate synthase [Syntrophobotulus glycolicus DSM
8271]
gi|324965406|gb|ADY56185.1| farnesyl-diphosphate synthase [Syntrophobotulus glycolicus DSM
8271]
Length = 289
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 109/232 (46%), Gaps = 32/232 (13%)
Query: 41 KNK-SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGH 99
+NK SY+T + ED Q + K + E M + + A + P L +AA E+VGG
Sbjct: 3 QNKYSYFTGLIED----FLQKLPWKANDVLSESMAYTLMAGGKRVRPVLALAAAEIVGGA 58
Query: 100 REQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFG 159
E I A L ++H S IH++LP D + +PT + F T LL D +L +G
Sbjct: 59 PEVVIPCACGLEMIHTYSLIHDDLPALDNDDY-RRGRPTNHKVFGEATALLAGDGLLTYG 117
Query: 160 LELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQY-------NELQCSQCDDDDRK 212
+LLA SD P R ++V+ E A+G QG+V GQ EL SQ
Sbjct: 118 FQLLA-SDVPVPLE--RQIKVIRETAEAVGWQGMVRGQVLDTLGEKGELSVSQ------- 167
Query: 213 LNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
IT++ + K G L GAILGGG E+EI L Y +G+
Sbjct: 168 ---ITNI------HHLKTGALLTASVRLGAILGGGLEEEIRQLSIYAAALGL 210
>gi|357038612|ref|ZP_09100409.1| Farnesyltranstransferase [Desulfotomaculum gibsoniae DSM 7213]
gi|355359404|gb|EHG07166.1| Farnesyltranstransferase [Desulfotomaculum gibsoniae DSM 7213]
Length = 296
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 102/219 (46%), Gaps = 10/219 (4%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++E MR+ VFA + PAL +A VGG + + AA A+ ++H S +H++LP
Sbjct: 29 PPLIHEAMRYSVFAGGKRLRPALVLAGARAVGGDEKSVLQAACAIELLHTYSLVHDDLPA 88
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D + PT + + +L DA+L LLA + R++RV+ E+
Sbjct: 89 MDNDDF-RRGNPTNHKVYGEAMAVLAGDALLTLAFGLLAGVSQTGSFGADRVVRVIAEVA 147
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
A G+ G++ GQ ++Q + D + L I + K G L+ GAIL
Sbjct: 148 EAAGTAGLIGGQVVDMQSTGKSIDKQTLEYI---------HVHKTGALYRASVRTGAILA 198
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
G + +++ L Y +G+ IV L + ++L K
Sbjct: 199 GAAPEQLYHLTVYAENLGLAFQIVDDILDIAGDEQKLGK 237
>gi|169831187|ref|YP_001717169.1| polyprenyl synthetase [Candidatus Desulforudis audaxviator MP104C]
gi|169638031|gb|ACA59537.1| Polyprenyl synthetase [Candidatus Desulforudis audaxviator MP104C]
Length = 295
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 106/229 (46%), Gaps = 12/229 (5%)
Query: 56 HLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHA 115
+LRQA + P ++E MR+ VFA + PAL +AA + VG + AA A+ ++H
Sbjct: 20 YLRQAS--ENPPVIHEAMRYSVFAGGKRLRPALTLAAAQAVGAPERLVLPAACAIELIHT 77
Query: 116 ASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSG 175
S IH++LP D L + KPT + F LL A+ E+LA G +
Sbjct: 78 YSLIHDDLPAMDNDDL-RRGKPTNHRVFGEAVALLAGSALFALAFEVLAGCRRDGGLAAE 136
Query: 176 RILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHA 235
RIL V+ E+ A G+ G++ GQ ++ + +L + ++ K G L
Sbjct: 137 RILAVVEEVAAACGTAGLIGGQALDVVSVSRTVSEAELEAV---------HRAKTGALFR 187
Query: 236 CGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
GA+LGG S ++E L + + G+ I L T E+ K
Sbjct: 188 AAVRAGAVLGGASPVQLERLTVFAEHFGLAFQITDDILDVTGYAEQTGK 236
>gi|302142446|emb|CBI19649.3| unnamed protein product [Vitis vinifera]
Length = 301
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 110/224 (49%), Gaps = 29/224 (12%)
Query: 28 RPMMVTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPA 87
+P +M+T N K Y + L +AV VK P++++E MR+ + A
Sbjct: 57 QPNTFLYSMNTFN-FKDYMIQKASSVHKALDEAVYVKSPIKIHEAMRYSLLA-------- 107
Query: 88 LCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNT 147
GG R A+ AA A+ ++H S IH++LP D L + KPT + F +
Sbjct: 108 ---------GGKRSNAMPAACAVEMIHTMSLIHDDLPCMDNDDL-RRGKPTNHKVFGEDV 157
Query: 148 ELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCD 207
+L D++L F E LA++ + G +S RI+ + E+ +++G++G+V GQ ++ +
Sbjct: 158 AVLAGDSLLAFAFEHLATATS--GVSSSRIVAAVGELAKSIGAEGLVAGQVVDISSTGQS 215
Query: 208 DDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKE 251
D G+ +E + K L GA+LGGGS++E
Sbjct: 216 D-----VGLDQLEF---IHIHKTAALLEAAVVLGALLGGGSDEE 251
>gi|134298940|ref|YP_001112436.1| polyprenyl synthetase [Desulfotomaculum reducens MI-1]
gi|134051640|gb|ABO49611.1| farnesyl-diphosphate synthase [Desulfotomaculum reducens MI-1]
Length = 294
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 12/199 (6%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++E MR+ +FA + P L +AA + VGG+ E+ + A A+ ++H S +H++LP
Sbjct: 29 PSVIHEAMRYSIFAGGKRLRPILVLAATQAVGGNTEKVMPVACAMELIHTYSLVHDDLPA 88
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D + +PT + + +LV DA+ EL+A + + R+ +V +E+
Sbjct: 89 MDNDDF-RRGRPTNHKVYGEAMAILVGDALQTLAFELIAQTTESF--EADRVNQVTLEIA 145
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
+A GS G++ GQ ++ D D L I ++ K G L GAILG
Sbjct: 146 KAAGSSGLIGGQVVDILSENRDIDGDTLEYI---------HRHKTGALFRASIRAGAILG 196
Query: 246 GGSEKEIELLRRYGFYVGM 264
G + ++ L Y +G+
Sbjct: 197 GATVNQLAALTLYAEQMGL 215
>gi|123966393|ref|YP_001011474.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9515]
gi|123200759|gb|ABM72367.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9515]
Length = 300
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 106/223 (47%), Gaps = 12/223 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P + E MR+ + A + P LC+A+C L GG A+ A A+ ++H S IH++LP
Sbjct: 35 PEILRESMRYSLLAGGKRIRPILCLASCSLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPA 94
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D L + +PT + + +L DA+L E++ S G + R+L V+ E++
Sbjct: 95 MDNDDL-RRGRPTNHKVYGDAIAILAGDALLTRAFEMV--SLRSPGVDPNRLLNVIGELS 151
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
G+ G+V GQ +L+C + D+E + K G L GA++
Sbjct: 152 LVAGAPGLVGGQVVDLECEGKE---------VDLETLEYIHLHKTGALLKACVRTGAMIA 202
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
G +++ ++ L Y +G+ I+ L T E+L K A K
Sbjct: 203 GANDELLKALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGK 245
>gi|357122245|ref|XP_003562826.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Brachypodium distachyon]
Length = 356
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 119/232 (51%), Gaps = 21/232 (9%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P +++ MR+ + A + PALC+A+C +VGG A+ AAA+ ++H S +H++LP
Sbjct: 81 PAALHDAMRYALLAGGKRVRPALCLASCVVVGGREAWAMAPAAAVEMVHTMSLVHDDLPC 140
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDN-----PAGNNSGRILRV 180
D L + KPT + + +L DA+L +AS D+ + R++R
Sbjct: 141 MDDDDL-RRGKPTCHVVYGEPIAVLAGDALLSLSFGHMASMDSYPPDVDPEKHPARVVRG 199
Query: 181 MVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDV----EMTYETYKKKEGRLHAC 236
+ E+ R +GS+G+V GQ +L+ + G T+ + Y K L A
Sbjct: 200 IGELARCIGSEGLVAGQVVDLE----------MTGSTETVPLDRLEYIHLHKTAALLEA- 248
Query: 237 GAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GAI+GGGS+++IE LR+Y +G++ +V L T+ EEL K A K
Sbjct: 249 SVVIGAIIGGGSDEQIERLRKYARSIGLLFQVVDDILDVTKSSEELGKTAGK 300
>gi|222055717|ref|YP_002538079.1| polyprenyl synthetase [Geobacter daltonii FRC-32]
gi|221565006|gb|ACM20978.1| Polyprenyl synthetase [Geobacter daltonii FRC-32]
Length = 297
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 105/217 (48%), Gaps = 12/217 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P +++ MR+ +FA + P L +AACE VGG+ QA+ AA A+ ++H S IH++LP
Sbjct: 29 PASLHKSMRYSIFAGGKRIRPILMLAACEAVGGNISQAMPAACAMEMIHTYSLIHDDLPA 88
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D + PT + F +L DA+L LL++ +++V+ E++
Sbjct: 89 MDDDDF-RRGNPTNHKVFGEAVAILAGDALLTEAFILLSNLAAAPTVPPAALVQVIQEIS 147
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
GS+G+V GQ +++ N D+ + K G L GA+LG
Sbjct: 148 CCAGSRGMVGGQVVDMESEG--------NAEIDLATVQYIHTHKTGALIKASVKSGALLG 199
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRL---GPTEEI 279
G S K+ E L RYG +G+ I L G TEEI
Sbjct: 200 GASSKDAESLTRYGEAIGLAFQIADDILDIEGTTEEI 236
>gi|157273307|gb|ABV27206.1| geranylgeranyl diphosphate synthase [Candidatus Chloracidobacterium
thermophilum]
Length = 292
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 101/220 (45%), Gaps = 15/220 (6%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++E MR+ + A + P L +AA E GG E+ A A ++H S IH++LP
Sbjct: 28 PPRIHEAMRYSLMAGGKRLRPILVLAAGEAFGGAPERLYPVACAFEMVHTYSLIHDDLPA 87
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D L + PT + F T +L D ++ +LA D PA +RV+ E+
Sbjct: 88 MDNDDL-RRGMPTCHKQFDEATAILAGDGLMTHAFRILAEMDAPAEQK----VRVIRELA 142
Query: 186 RAMGS-QGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAIL 244
G+ +G++ GQ +L+ + D +L I ++ K G L CG I+
Sbjct: 143 VGSGTVEGMIAGQIVDLEAERKPIDAERLKFI---------HRAKTGALIRGAVVCGGIV 193
Query: 245 GGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
G +E ++ LL YG VG+ I L T E+L K
Sbjct: 194 AGATESDLALLAAYGDRVGLAFQIADDILDETATAEQLGK 233
>gi|404496792|ref|YP_006720898.1| trans-isoprenyl diphosphate synthase [Geobacter metallireducens
GS-15]
gi|418065257|ref|ZP_12702631.1| Polyprenyl synthetase [Geobacter metallireducens RCH3]
gi|78194397|gb|ABB32164.1| trans-isoprenyl diphosphate synthase [Geobacter metallireducens
GS-15]
gi|373562435|gb|EHP88646.1| Polyprenyl synthetase [Geobacter metallireducens RCH3]
Length = 297
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 103/217 (47%), Gaps = 12/217 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
PV V+ MR+ VFA + P L +AACE VGG + A+ AA A+ ++H S IH++LP
Sbjct: 29 PVSVHRAMRYSVFAGGKRIRPVLMLAACEAVGGTPDLALPAACAMEMIHTYSLIHDDLPA 88
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D + +PT + F +L DA+L L++S + A RIL V+ E+
Sbjct: 89 MDDDDF-RRGRPTNHKVFGEAIAILAGDALLTEAFILMSSPEYAAKAGHARILPVIHEIG 147
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
GS+G+V GQ +++ D D+ + K G L GAILG
Sbjct: 148 ICAGSRGMVGGQVVDMESEGKKD--------IDLATVQYIHTHKTGALMKASVKAGAILG 199
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRL---GPTEEI 279
G + + RYG +G+ I L G TE+I
Sbjct: 200 GAEGDALAAMTRYGEAIGLAFQIADDILDIEGTTEQI 236
>gi|388522881|gb|AFK49502.1| unknown [Medicago truncatula]
Length = 235
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 83/149 (55%), Gaps = 3/149 (2%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
KSY + L AV ++EP++V+E MR+ + A + P LC+AA ELVGG
Sbjct: 82 KSYMIEKATRVNKALDDAVSLREPLKVHEAMRYSLLAGGKRVRPVLCLAARELVGGTEPM 141
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ AA A+ ++H S IH++LP D L + KPT + F + +L DA+L F E
Sbjct: 142 AMPAACAVEMIHTMSLIHDDLPCMDNDDL-RRGKPTNHKVFGEDVAVLAGDALLAFAFEH 200
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQ 191
+A S + RI+R + E+ +++GS+
Sbjct: 201 IAVST--VDVSPARIVRAIGELAKSIGSE 227
>gi|188586314|ref|YP_001917859.1| farnesyl-diphosphate synthase [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179351001|gb|ACB85271.1| farnesyl-diphosphate synthase [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 297
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 105/219 (47%), Gaps = 9/219 (4%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++E M + VFA + P L +AA +L G +++ + A A+ ++H S IH++LP
Sbjct: 29 PTAIHEAMHYSVFAGGKRLRPLLTLAAGDLFGANKKTILPFACAIELIHTYSLIHDDLPA 88
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D L + K T + F + +L DA+L + EL+ S ++ L + E+
Sbjct: 89 LDNDDL-RRGKSTNHVVFGEDIAILAGDALLNYAFELMTSKGVENFTDARTPLWAISEVA 147
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
+A G++G++ GQ +++ + N D+E +K K G L GAIL
Sbjct: 148 KASGTKGMIGGQVVDIKSEK--------NADIDLETVSYIHKHKTGALFTASIRIGAILS 199
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
S+ ++E L Y +G+ +V L + ++L K
Sbjct: 200 QASQADLEKLTTYAQKLGLAFQVVDDILDIEGDEQKLGK 238
>gi|220927127|ref|YP_002502429.1| polyprenyl synthetase [Methylobacterium nodulans ORS 2060]
gi|219951734|gb|ACL62126.1| Polyprenyl synthetase [Methylobacterium nodulans ORS 2060]
Length = 337
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 10/202 (4%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ PV + + MRH V + P L + ++GG A+ A + + ++H S +H++
Sbjct: 65 ITRPVRLMQGMRHAVLGGGKRLRPFLTIETARMLGGPYAGALAAGSGIELVHCYSLVHDD 124
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRI-LRVM 181
LP D L + KPT++ AF T +LV DA+L F E+LA +P R+ ++
Sbjct: 125 LPAMDNDDL-RRGKPTVHRAFDEATAILVGDALLTFAFEILA---DPVWQPDARVRAELV 180
Query: 182 VEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACG 241
+ + RA G G+V GQ +L + R DV+ T + K G L A G
Sbjct: 181 LGLARAAGLGGMVGGQLLDLGA-----EGRFGPANLDVDATLQLQAMKTGALLAVSVDAG 235
Query: 242 AILGGGSEKEIELLRRYGFYVG 263
AI+GG + L YG +G
Sbjct: 236 AIVGGADPDQRAALLAYGRALG 257
>gi|398803633|ref|ZP_10562651.1| geranylgeranyl pyrophosphate synthase [Polaromonas sp. CF318]
gi|398095886|gb|EJL86217.1| geranylgeranyl pyrophosphate synthase [Polaromonas sp. CF318]
Length = 306
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 106/228 (46%), Gaps = 22/228 (9%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P + + MR+ V + P L +AACE VGG+RE A+ AA A+ ++HA S +H+++P
Sbjct: 40 PAGLGDAMRYAVLDGGKRLRPLLVMAACEAVGGNREAALRAACAVELIHAYSLVHDDMPC 99
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPA-GNNSGRILRVMVEM 184
D ++ + KPT++ F LL DA+ E L D R+ R++ +
Sbjct: 100 MD-NDVLRRGKPTVHVKFGQAQALLAGDALQALAFEFLTPEDGSVDAATQARLCRMLAQ- 157
Query: 185 TRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHAC----GAAC 240
A G QG+ GQ +L D ++L +E ++ K G L GAAC
Sbjct: 158 --AAGFQGMAGGQAIDLASVGMPLDSQQL---------HEMHRLKTGALLEASVMMGAAC 206
Query: 241 GAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
G + + + LR YG VG+ +V L T + L K A K
Sbjct: 207 GTV----APAAWQALRDYGSAVGLAFQVVDDILDVTADSATLGKTAGK 250
>gi|254513451|ref|ZP_05125516.1| geranyltranstransferase [Rhodobacteraceae bacterium KLH11]
gi|221532455|gb|EEE35451.1| geranyltranstransferase [Rhodobacteraceae bacterium KLH11]
Length = 301
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 106/227 (46%), Gaps = 16/227 (7%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
K P + MRH V + P L + L+G E + A AL ++H S +H++L
Sbjct: 34 KSPPRLLAAMRHGVLNGGKRLRPVLVLECAALLGRCDEGVLDVACALELIHCYSLVHDDL 93
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE 183
P D L + KPT++ AF T +L DA+L +++ A ++ L++ E
Sbjct: 94 PAMDNDDL-RRGKPTVHRAFDEATGILAGDALLTLAFDVIGQ--EAAHPDATIRLQLSRE 150
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRL--HACGAACG 241
+++A G G+ GQ +LQ CD T++E+ Y+ + K G L +AC A G
Sbjct: 151 LSKASGVVGMAGGQMLDLQAEHCDR--------TEIEI-YKFHAMKTGALLRYACRA--G 199
Query: 242 AILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
AIL S I+ L R+G +G+ I L EEL K K
Sbjct: 200 AILADASNDNIDRLTRFGTTIGLSFQIADDLLDVVASPEELGKATGK 246
>gi|414154704|ref|ZP_11411021.1| Farnesyl diphosphate synthase [Desulfotomaculum hydrothermale Lam5
= DSM 18033]
gi|411453535|emb|CCO08925.1| Farnesyl diphosphate synthase [Desulfotomaculum hydrothermale Lam5
= DSM 18033]
Length = 294
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++E MR+ VFA + P L +AA + VGG+ ++ + A AL ++H S +H++LP
Sbjct: 29 PAVLHEAMRYSVFAGGKRLRPILVLAAAKAVGGNTDKIMPVACALELIHTYSLVHDDLPA 88
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDN---PAGNNSGRILRVMV 182
D + +PT + + T +LV DA+L EL+A PA N RV
Sbjct: 89 MDNDDY-RRGRPTNHKVYGEATAILVGDALLTLAFELVARCGEDCPPAAVN-----RVAR 142
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
E+ +A GS+G++ GQ +L + L I ++ K G L GA
Sbjct: 143 EIAQAAGSRGLIGGQVVDLLSENKQIESSVLEYI---------HRHKTGALFRAAVRAGA 193
Query: 243 ILGGGSEKEIELLRRYGFYVGM 264
ILGG E ++ L Y +G+
Sbjct: 194 ILGGAGEAQLAALTTYAEQMGL 215
>gi|308274743|emb|CBX31342.1| Geranylgeranyl pyrophosphate synthetase, chloroplastic [uncultured
Desulfobacterium sp.]
Length = 316
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 10/197 (5%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
++ + M + + + + P LC+AA E VGG + + AA A+ ++H S IH++LP D
Sbjct: 51 QLSKAMEYSLISEGKRIRPILCIAAAESVGGKQSDVLPAACAIEIIHTYSLIHDDLPAID 110
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
L+ + KPT + AF T +L DA+L ++L+ + N+ + L+++ ++ A
Sbjct: 111 -NDLLRRGKPTCHAAFNEATAILAGDALLTLAFQVLSEFELHNNTNALKWLKIINLISTA 169
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G G++EGQ ++ KL E + K G L GAIL
Sbjct: 170 AGYMGMIEGQMRDIASENTQILLNKLE---------ELHILKTGALIVASVESGAILANA 220
Query: 248 SEKEIELLRRYGFYVGM 264
S +I+ L+ Y +G+
Sbjct: 221 SLDQIKQLKIYAKKIGL 237
>gi|343469128|gb|AEM43805.1| geranylgeranyl diphosphate synthase [Castanea mollissima]
Length = 213
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 15/179 (8%)
Query: 112 VMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAG 171
++H S IH++LP D L + KPT + F + +L DA+L F E +A S G
Sbjct: 1 MIHTMSLIHDDLPCMDNDDL-RRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAVS--TVG 57
Query: 172 NNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETY--KKK 229
R++ + E+ R++G++G+V GQ ++ CS+ G++DV + + + K
Sbjct: 58 VPPARVIGAVGELARSIGTEGLVAGQVVDI-CSE---------GLSDVGLEHLEFIHLHK 107
Query: 230 EGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
L GAILGGGS +E+E LR + Y+G++ +V L T+ +EL K A K
Sbjct: 108 TAALLEAAVVLGAILGGGSHEEVEKLRNFARYIGLLFQVVDDILDVTKSSQELGKTAGK 166
>gi|83590356|ref|YP_430365.1| farnesyl-diphosphate synthase [Moorella thermoacetica ATCC 39073]
gi|83573270|gb|ABC19822.1| farnesyl-diphosphate synthase [Moorella thermoacetica ATCC 39073]
Length = 297
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 101/219 (46%), Gaps = 12/219 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P V++ M + +FA + P L +AA E VG E + AA A+ +H S IH++LP
Sbjct: 32 PPAVHQAMHYSLFAGGKRLRPILVLAAGEAVGSQPEPLLPAACAVEFIHTYSLIHDDLPA 91
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D + +PT + + LL DA+L E+L S PA RILR E+
Sbjct: 92 MDNDD-YRRGRPTCHKVYGEAIALLAGDALLTLAFEVL--SRIPATIPPERILRATRELA 148
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
+ GSQG++ GQ +++ K+N I + K G L G ILG
Sbjct: 149 ASAGSQGLIGGQVVDMEAEGQPVTLEKVNYI---------HNHKTGSLIRACLRLGGILG 199
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
G E+++ LL RYG +G+ I L T + + K
Sbjct: 200 GAGEEQLALLTRYGEALGLAFQITDDILDITGDFSQTGK 238
>gi|46310089|gb|AAS87323.1| geranylgeranyl pyrophosphate synthetase [Taxus wallichiana var.
chinensis]
Length = 207
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 92/180 (51%), Gaps = 10/180 (5%)
Query: 109 ALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDN 168
A+ ++H S IH++LP D + KPT + F +T +L DA+L F E +A + +
Sbjct: 2 AMEMIHTMSLIHDDLPRMDNDDF-RRGKPTNHKVFGEDTAVLAGDALLSFAFEHIAVATS 60
Query: 169 PAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKK 228
S R LRV+ E+ + +GSQG+V GQ ++ S+ D + D++ +
Sbjct: 61 KT-VPSDRTLRVISELGKTIGSQGLVGGQVVDI-TSEGDAN-------VDLKTLEWIHIH 111
Query: 229 KEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
K L C G ILGG +E EI +RRY VG++ ++ L T+ EEL K A K
Sbjct: 112 KTAVLLECSVVSGGILGGATEDEIARIRRYARCVGLLFQVMDDILDVTKSSEELGKTAGK 171
>gi|256752864|ref|ZP_05493702.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1]
gi|256748241|gb|EEU61307.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1]
Length = 168
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 75/136 (55%), Gaps = 1/136 (0%)
Query: 62 VVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHE 121
+ ++P +YE MR+ VFA + P LC+++CEL+GG ++A+ A A+ ++H S IH+
Sbjct: 23 IEEKPEIIYEAMRYSVFAGGKRLRPVLCLSSCELLGGDIKKALPVACAIELIHTYSLIHD 82
Query: 122 NLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVM 181
+LP D L + KPT + + +L D +L G E+L + RIL+
Sbjct: 83 DLPAMDNDDL-RRGKPTNHKVYGEAIAILAGDGLLNLGYEVLVRHALEHPEDYERILKAT 141
Query: 182 VEMTRAMGSQGVVEGQ 197
E+ A G +G++ GQ
Sbjct: 142 NEIATASGCKGIIGGQ 157
>gi|78044434|ref|YP_360807.1| geranyltranstransferase [Carboxydothermus hydrogenoformans Z-2901]
gi|77996549|gb|ABB15448.1| geranyltranstransferase [Carboxydothermus hydrogenoformans Z-2901]
Length = 295
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 110/242 (45%), Gaps = 13/242 (5%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K Y V E IG L P +++ M + + A + P L +AA E G E+
Sbjct: 8 KRYRKMVEEGIGRFLPPDDTY--PPVIHQAMNYSLKAGGKRLRPVLMLAAGEWSGIAPEK 65
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
+ AA + +H S IH++LP D + KPT + F +L DA+L EL
Sbjct: 66 LLPAAVGVECLHTYSLIHDDLPAMDNDDF-RRGKPTNHKVFGEAIAILAGDALLTKAFEL 124
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
A + G + R++RV+ E+ A GS+G++ GQ +L S+ D E+
Sbjct: 125 TAKTLE-QGIPAERVVRVIQELAVASGSEGLIAGQVVDLSSSEAKKDP---------EVL 174
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
+ K RL G IL G +E+EI+ L YG ++G+ IV L + +++
Sbjct: 175 LYIHLNKTARLIRYSLIAGGILAGATEEEIKALDDYGRHLGLAFQIVDDLLDVVGDFQKI 234
Query: 283 KK 284
K
Sbjct: 235 GK 236
>gi|39996864|ref|NP_952815.1| trans-isoprenyl diphosphate synthase [Geobacter sulfurreducens PCA]
gi|409912286|ref|YP_006890751.1| trans-isoprenyl diphosphate synthase [Geobacter sulfurreducens
KN400]
gi|39983752|gb|AAR35142.1| trans-isoprenyl diphosphate synthase [Geobacter sulfurreducens PCA]
gi|298505877|gb|ADI84600.1| trans-isoprenyl diphosphate synthase [Geobacter sulfurreducens
KN400]
Length = 297
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 104/217 (47%), Gaps = 12/217 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P V+ MR+ VFA + P L +AAC+ VGG A+ AA A+ ++H S IH++LP
Sbjct: 29 PSSVHRAMRYSVFAGGKRVRPILMLAACDAVGGDTALALPAACAMEMIHTYSLIHDDLPA 88
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D + +PT + F +L DA+L L++S A S R+L V+ E+
Sbjct: 89 MDDDDF-RRGRPTNHKVFGEAIAILAGDALLTEAFILISSPSYAAAVGSDRLLPVIHEIA 147
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
GS+G+V GQ +++ N D+ + +K G L GA+LG
Sbjct: 148 LCAGSRGMVGGQVVDMESEG--------NKEIDLATVQYIHTRKTGALIKASIKAGAVLG 199
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRL---GPTEEI 279
G + ++ + RYG +G+ I L G TE+I
Sbjct: 200 GANADAVKAVTRYGEAIGLAFQIADDILDIEGTTEQI 236
>gi|146297123|ref|YP_001180894.1| polyprenyl synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|145410699|gb|ABP67703.1| Polyprenyl synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 298
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 104/224 (46%), Gaps = 16/224 (7%)
Query: 45 YWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHR--EQ 102
Y E I HL + P +YE MR+ VFA + P LC+ + EL+ G E+
Sbjct: 9 YLKYAQEKIDKHLDSLLGKNSPDVIYEAMRYSVFAGGKRLRPILCLLSYELLSGKEADEK 68
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
+ A A+ ++H S IH++LP D ++ + KPT + F +L DA+L E+
Sbjct: 69 VLDIACAIELIHTYSLIHDDLPAMD-NDVLRRGKPTNHVVFGEAIAILAGDALLNKAAEV 127
Query: 163 LASS--DNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVE 220
+ N A N ++ + +A G++G++ GQ ++ S + IT+
Sbjct: 128 CFNWILRNKAKEN---FIKAAEYLFKASGTEGMIGGQVIDVVNSGKE--------ITEEN 176
Query: 221 MTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
+ YE + KK +L CGA + G E+ I YG +G+
Sbjct: 177 LLYEMHLKKTSKLIQASCVCGAYVAGAKEEVISDFEEYGKNLGL 220
>gi|78184316|ref|YP_376751.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CC9902]
gi|78168610|gb|ABB25707.1| farnesyl-diphosphate synthase [Synechococcus sp. CC9902]
Length = 296
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 116/253 (45%), Gaps = 12/253 (4%)
Query: 36 MSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACEL 95
M+ K+Y + + A L ++ + P + + MR+ + A + P LC+AACEL
Sbjct: 1 MTAEFDFKAYLGKAKDTVEAALDDSLGPERPESLRDAMRYSLLAGGKRLRPILCLAACEL 60
Query: 96 VGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAM 155
GG + A+ A AL ++H S IH++LP + + +PT + + +L DA+
Sbjct: 61 AGGEAKHAVPTAVALEMIHTMSLIHDDLPAM-DDDDVRRGRPTNHKVYGEAVAILAGDAL 119
Query: 156 LPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNG 215
L E++A G + R+L+V+ E++ G+ G+V GQ +L+
Sbjct: 120 LTRAFEMVAL--RSPGVPAERLLKVVGELSLVAGAPGLVGGQVVDLESE---------GK 168
Query: 216 ITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGP 275
D+E + K G L + GA++G + I LR Y +G+ I+ L
Sbjct: 169 QVDLETLEYIHLHKTGALLSACVITGALIGNADDTLITALRTYARGIGLAFQIIDDILDI 228
Query: 276 TEEIEELKKLAFK 288
T E L K A K
Sbjct: 229 TASSEVLGKTAGK 241
>gi|116071037|ref|ZP_01468306.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. BL107]
gi|116066442|gb|EAU72199.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. BL107]
Length = 296
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 116/253 (45%), Gaps = 12/253 (4%)
Query: 36 MSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACEL 95
M+ K+Y E + A L ++ + P + + MR+ + A + P LC+AACEL
Sbjct: 1 MTAEFDFKAYLGKAKETVEAALDDSLGPERPESLRDAMRYSLLAGGKRLRPILCLAACEL 60
Query: 96 VGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAM 155
GG + A+ A AL ++H S IH++LP + + +PT + + +L DA+
Sbjct: 61 AGGDAKHAVPTAVALEMIHTMSLIHDDLPAM-DDDDVRRGRPTNHKVYGEAVAILAGDAL 119
Query: 156 LPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNG 215
L E++A G + ++L+V+ E++ G+ G+V GQ +L+
Sbjct: 120 LTRAFEMVAL--RSPGVPADQLLKVVGELSLVAGAPGLVGGQVVDLESE---------GK 168
Query: 216 ITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGP 275
D+E + K G L + GA++G + I LR Y +G+ I+ L
Sbjct: 169 QVDLETLEYIHLHKTGALLSACVITGALIGNADDTLITALRTYARGIGLAFQIIDDILDI 228
Query: 276 TEEIEELKKLAFK 288
T E L K A K
Sbjct: 229 TASSEVLGKTAGK 241
>gi|295695407|ref|YP_003588645.1| polyprenyl synthetase [Kyrpidia tusciae DSM 2912]
gi|295411009|gb|ADG05501.1| Polyprenyl synthetase [Kyrpidia tusciae DSM 2912]
Length = 295
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 114/256 (44%), Gaps = 19/256 (7%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
++E MR+ +FA + P L +AACE GG +A+ AA AL ++H S IH++LP
Sbjct: 33 LHEAMRYSLFAGGKRLRPLLAMAACEGAGGSLREALPAACALELVHTYSLIHDDLPAM-D 91
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
+ +PT + F +L DA+L +LA + PA +R++ E+ A
Sbjct: 92 DDDYRRGRPTNHRVFGEAMAVLAGDALLTLAFGVLAKAPLPATTR----IRLVDELAEAS 147
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
G G+V GQ +++ + D G D E+ + ++KK G L G + G
Sbjct: 148 GKDGMVGGQALDIEATGAD-------GQPDPELLRDLHRKKTGALIIASLRMGGLCAGAD 200
Query: 249 EKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVNSFN-------DENAE 301
E ++ L YG VG+ IV L + + K + +N D + E
Sbjct: 201 ESLLDRLSAYGQAVGLAYQIVDDLLDVGGDARRIGKAVGRDAALNKLTWPGVYGVDRSRE 260
Query: 302 VIFSLVDDNITHVLGF 317
+ L + I H+ G
Sbjct: 261 DVRRLTKEAIAHLHGL 276
>gi|149181862|ref|ZP_01860351.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
sp. SG-1]
gi|148850401|gb|EDL64562.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
sp. SG-1]
Length = 295
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P +V E M + + A + P L A +G + + +AAAL ++H S IH++LP
Sbjct: 31 PEKVKEAMAYSLKAGGKRIRPLLLFATLHTLGKDPKIGLESAAALEMIHTYSLIHDDLPS 90
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D L + KPT + F T +L D +L + E+LA + + + +++R++ +
Sbjct: 91 MDNDDL-RRGKPTNHKVFGEATAILAGDGLLTYSFEVLAGTPDVSAE---KLIRLVSLLA 146
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
++ G +G+V GQ +++ ++ E+ Y +K K GRL A AIL
Sbjct: 147 KSAGPEGMVGGQAADMEGES--------QSLSVEELEY-IHKNKTGRLLAFSVMAAAILA 197
Query: 246 GGSEKEIELLRRYGFYVGM 264
+E++I LL Y F++G+
Sbjct: 198 DSTEEQISLLEEYAFHIGL 216
>gi|374633853|ref|ZP_09706218.1| geranylgeranyl pyrophosphate synthase [Metallosphaera
yellowstonensis MK1]
gi|373523641|gb|EHP68561.1| geranylgeranyl pyrophosphate synthase [Metallosphaera
yellowstonensis MK1]
Length = 326
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 128/255 (50%), Gaps = 27/255 (10%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
+ Y V E++ +RQ + + E+YE R+ + A + P + VA+ +L G R++
Sbjct: 3 EEYSRQVIEEVEKRIRQ-YLSGDVHELYEASRYLIEAGGKRLRPLMLVASSDLFHGDRKR 61
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
+ +A +A+ V+H + IH+++ D + + +PT++ + +L D + E+
Sbjct: 62 SYLAGSAVEVLHNFTLIHDDIMDQD---TLRRGRPTVHVKWGVPMAILAGDLLHAKAFEM 118
Query: 163 LASS----DNPAGNNSGRIL-RVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGIT 217
L S D N++ R+ + ++E++ EGQ ++Q + D +T
Sbjct: 119 LIDSVSGLDEARANDALRLFAKSVIELS---------EGQALDMQFEERWD-------VT 162
Query: 218 DVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTE 277
+ E E +KK +L AC A+ G I+GGG+EK+++ L YG +G+ IV LG T
Sbjct: 163 EREYI-EMVRKKTAQLFACSASLGGIIGGGTEKDVKNLFLYGEKIGISFQIVDDILGLTA 221
Query: 278 EIEELKKLAFK-LRE 291
+ EL K + LRE
Sbjct: 222 DERELGKPVYSDLRE 236
>gi|217069938|gb|ACJ83329.1| unknown [Medicago truncatula]
Length = 214
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 70/124 (56%), Gaps = 1/124 (0%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
KSY + L AV ++EP++V+E MR+ + A + P LC+AACELVGG
Sbjct: 82 KSYMIEKATRVNKALDDAVSLREPLKVHEAMRYSLLAGGKRVRPVLCLAACELVGGTEPM 141
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ AA A+ ++H S IH++LP D L + KPT + F + +L DA+L F E
Sbjct: 142 AMPAACAVEMIHTMSLIHDDLPCMDNDDLR-RGKPTNHKVFGEDVAVLAGDALLAFAFEH 200
Query: 163 LASS 166
+A S
Sbjct: 201 IAVS 204
>gi|347755955|ref|YP_004863519.1| farnesyl-diphosphate synthase [Candidatus Chloracidobacterium
thermophilum B]
gi|347588473|gb|AEP13003.1| farnesyl-diphosphate synthase [Candidatus Chloracidobacterium
thermophilum B]
Length = 292
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 101/224 (45%), Gaps = 15/224 (6%)
Query: 62 VVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHE 121
V P ++E MR+ + A + P L +AA E+ GG E+ A A ++H S IH+
Sbjct: 24 VTTPPPRIHEAMRYSLMAGGKRLRPILVLAAGEVFGGAPERLYPVACAFEMVHTYSLIHD 83
Query: 122 NLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVM 181
+LP D L + PT + F T +L D ++ +LA D PA +RV+
Sbjct: 84 DLPAMDNDDL-RRGMPTCHKQFDEATAILAGDGLMTHAFRILAEMDAPAEQK----VRVI 138
Query: 182 VEMTRAMGS-QGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAAC 240
E+ G+ +G++ GQ +L+ D +L I ++ K G L C
Sbjct: 139 RELAVGSGTVEGMIAGQIVDLEAEGKPIDAGRLAFI---------HRAKTGALIRGALVC 189
Query: 241 GAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
G I+ +E ++ LL YG VG+ I L T E+L K
Sbjct: 190 GGIVADAAESDLALLSAYGDRVGLAFQIADDILDETATAEQLGK 233
>gi|189425242|ref|YP_001952419.1| polyprenyl synthetase [Geobacter lovleyi SZ]
gi|189421501|gb|ACD95899.1| Polyprenyl synthetase [Geobacter lovleyi SZ]
Length = 297
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 12/219 (5%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
+ P +++ MR+ +FA + P L +AACE VGG ++A+ AA A+ ++H S IH++L
Sbjct: 27 ERPQSLHKAMRYSIFAGGKRVRPVLMLAACEAVGGQIDKAMPAACAMEMIHTYSLIHDDL 86
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE 183
P D + +PT + F +L D +L +L++ AG + L V+ E
Sbjct: 87 PAMDDDDF-RRGRPTNHKVFGEAIAILAGDGLLTEAFKLMSDPRFAAGIDPAARLGVIHE 145
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAI 243
+ G+ G+V GQ +++ D D+ + K G L GA+
Sbjct: 146 IATCAGTYGMVGGQVVDMESEGKPD--------MDLPTVQYIHAHKTGALIKASVVAGAL 197
Query: 244 LGGGSEKEIELLRRYGFYVGMIQGIVSRRL---GPTEEI 279
LGG +K++ +RRYG G+ I L G TEEI
Sbjct: 198 LGGADDKQLAAIRRYGEAAGLAFQIADDILDIEGTTEEI 236
>gi|374579594|ref|ZP_09652688.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus youngiae
DSM 17734]
gi|374415676|gb|EHQ88111.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus youngiae
DSM 17734]
Length = 288
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 95/194 (48%), Gaps = 13/194 (6%)
Query: 71 EPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTS 130
E M + + + P L +A+ E VGG+ E + AA AL ++H S IH++LP D
Sbjct: 29 ESMYYSLIGGGKRIRPVLALASAEAVGGNPETILRAAVALELIHTYSLIHDDLPAMDNDD 88
Query: 131 LIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGS 190
+ + + + F +L DA+L + ELLA SD R LRV+ E+ A G
Sbjct: 89 -YRRGRLSNHKVFGEAQAILAGDALLTYAFELLADSDL---GQPERQLRVIREVAVAAGK 144
Query: 191 QGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEK 250
+G+V GQ +L + K + ++E E +K K G L A G IL GG+E
Sbjct: 145 EGMVGGQVADLAG------EGKSLTLNEIE---EIHKAKTGALLTVSARLGGILAGGTED 195
Query: 251 EIELLRRYGFYVGM 264
+++ L Y +G+
Sbjct: 196 QVKALTDYAKALGL 209
>gi|292670718|ref|ZP_06604144.1| geranyltranstransferase [Selenomonas noxia ATCC 43541]
gi|292647664|gb|EFF65636.1| geranyltranstransferase [Selenomonas noxia ATCC 43541]
Length = 291
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 110/245 (44%), Gaps = 17/245 (6%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVE--VYEPMRHFVFAAPVNMAPALCVAACELVGGHR 100
K W + E I LR + + ++ + E M + + A + P L +AA + VG
Sbjct: 2 KELWRNRQELIERALRDELAKTDILDNTLREAMEYSLMAGGKRLRPILLMAAADAVGSDG 61
Query: 101 EQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGL 160
+ + AA AL ++H S IH++LP D + K T + + +L DA+L
Sbjct: 62 TKLLPAACALEMIHTYSLIHDDLPAMDNDD-YRRGKLTNHKVYGDGIAILAGDALLTLAF 120
Query: 161 E-LLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDV 219
LL D PA + +LRV+ E++RA G++G+V GQ +LQ N +
Sbjct: 121 TVLLRQKDVPAVS----LLRVVDEISRAAGAEGMVGGQVLDLQAE---------NKTISL 167
Query: 220 EMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEI 279
+ + K G L GAILGG SE+++ L Y + G+ I L
Sbjct: 168 DELRRVHMGKTGALFHAALRSGAILGGASEQQLTALTAYADHFGLAFQITDDILDVVGNA 227
Query: 280 EELKK 284
E++ K
Sbjct: 228 EDIGK 232
>gi|261416040|ref|YP_003249723.1| polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|385790913|ref|YP_005822036.1| geranylgeranyl diphosphate synthase [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|261372496|gb|ACX75241.1| Polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|302326253|gb|ADL25454.1| geranylgeranyl diphosphate synthase [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 295
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 19/225 (8%)
Query: 62 VVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHE 121
V P ++E MR+ +FA + P L A ++ GG E+ +A +AL ++H S IH+
Sbjct: 33 VKDRPCRLHEAMRYSMFAGGKRLRPGLAKATFDMFGGKGEKIWLATSALEMLHTFSLIHD 92
Query: 122 NLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVM 181
+LP D + K T + F T ++ DA+ E++ + N + +
Sbjct: 93 DLPCVDNDDY-RRGKLTSHKKFGEATAVMAGDALCIHAFEMMGKTGNA---------KAI 142
Query: 182 VEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACG 241
+ +G+ G++ G+ +++C D+E+ + K L G
Sbjct: 143 ELLAHLLGTYGMIGGEMTDIECE---------GKTVDLEIVDYIHYHKTAALIEASLLVG 193
Query: 242 AILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLA 286
A+L SEK++E++R YG +G+ IV L EEL K A
Sbjct: 194 AMLAKASEKDMEIIRNYGRSIGLAFQIVDDILDIVSTTEELGKDA 238
>gi|319651489|ref|ZP_08005617.1| geranyltranstransferase [Bacillus sp. 2_A_57_CT2]
gi|317396804|gb|EFV77514.1| geranyltranstransferase [Bacillus sp. 2_A_57_CT2]
Length = 296
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 113/223 (50%), Gaps = 13/223 (5%)
Query: 44 SYWTSVH-EDIGAHLRQAV-VVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHRE 101
S ++ +H E + HL+ V + P EV E M + + A + P L A+ G
Sbjct: 6 SSFSELHKEKLEIHLKDYVHKLNAPPEVKESMLYSLEAGGKRIRPMLLFASLAAFGEDTS 65
Query: 102 QAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE 161
+ + AAA+ ++H S IH++LP D L + KPT + F +L DA+L + +
Sbjct: 66 KGLWTAAAIEMVHTYSLIHDDLPSMDNDDL-RRGKPTNHKVFGEAFAILAGDALLTYSFQ 124
Query: 162 LLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEM 221
+A + + + + L ++ E+++A G++G+V GQ +++ + K G+ D+E
Sbjct: 125 TIAETPDEFASAETK-LSLIKELSKASGAEGMVGGQAADIKG------EGKQLGLEDLEY 177
Query: 222 TYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
+ K G+L C GAIL S++ I+ L ++ +++G+
Sbjct: 178 ---IHVHKTGKLLECSVVSGAILANASQETIQALSKFAYHLGL 217
>gi|262411038|gb|ACY66885.1| geranyl geranyl pyrophosphate synthase [Linum usitatissimum]
Length = 215
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 113 MHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGN 172
+H S IH++LP D L + KPT + F + +L DA+L F E +A S G
Sbjct: 1 IHTMSLIHDDLPCMDNDDL-RRGKPTNHKVFGEDVAVLAGDALLAFAFEHMAVS--TVGV 57
Query: 173 NSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGR 232
+ +I+R + E+ +++GS+G+V GQ D D L + ++ + + K G
Sbjct: 58 PAAKIVRAIGELAKSIGSEGLVAGQV-------VDIDSEGLANVGLEQLEF-IHLHKTGA 109
Query: 233 LHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
L GAILGGG+++E+E LR + +G++ +V L T+ +EL K A K
Sbjct: 110 LLEASVVLGAILGGGTDEEVEKLRSFARCIGLLFQVVGDILDVTKSSQELGKTAGK 165
>gi|294101849|ref|YP_003553707.1| geranyltranstransferase [Aminobacterium colombiense DSM 12261]
gi|293616829|gb|ADE56983.1| Geranyltranstransferase [Aminobacterium colombiense DSM 12261]
Length = 300
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 97/219 (44%), Gaps = 10/219 (4%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++E M + + A + P LCV A E VGG +E+ + A AL ++H AS IH++LP
Sbjct: 33 PPRLWESMTYSLQAGGKRLRPILCVKAAESVGGEKEKVLPMALALEMVHTASLIHDDLPA 92
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D SL + KPT + + +L DA+L + E G I++ +
Sbjct: 93 MDNDSL-RRGKPTNHMIYGDALAILAGDALLAWAFEYSLKGLMDRGVPPSSIVQALSIFA 151
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
+A+G G+ GQ D D + + +K L GAILG
Sbjct: 152 QAVGPSGICGGQV-------LDTDPASFT--SSLSFVANIALQKTAVLLQASLVTGAILG 202
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
G S++ +YG ++G+ IV L T EEL K
Sbjct: 203 GASQEIAGAFGKYGRHLGLAFQIVDDILDVTSSPEELGK 241
>gi|187735758|ref|YP_001877870.1| polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835]
gi|187425810|gb|ACD05089.1| Polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835]
Length = 297
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 106/231 (45%), Gaps = 15/231 (6%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
+ P +++ MR+ +FA M P LC+AA E GG A+V A A+ +MH S IH++L
Sbjct: 30 ESPETIHKAMRYSIFAGGKRMRPVLCLAAAEACGGLAVDALVPACAVEMMHTYSLIHDDL 89
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE 183
P D L + KPT + AF +L DA+L ++A D+ +R E
Sbjct: 90 PAMDNDDL-RRGKPTSHKAFGEGVAILAGDALLTEAFAVIAQVDDTERYTVRDYVR---E 145
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAI 243
+ GS ++ GQ +L+ + K +V YE K L G +
Sbjct: 146 LAATGGSTMLIGGQILDLE------GEHKQLSEPEVRTVYE---GKTAALLTTALRFGGM 196
Query: 244 LGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVNS 294
+E ++E L +G+ +G+ ++ L T E+L K A K +VNS
Sbjct: 197 SANATESQLEALTDFGYNLGLAFQVIDDILDLTASTEKLGKTAGK--DVNS 245
>gi|51246551|ref|YP_066435.1| geranylgeranyl pyrophosphate synthase [Desulfotalea psychrophila
LSv54]
gi|50877588|emb|CAG37428.1| probable geranylgeranyl pyrophosphate synthase [Desulfotalea
psychrophila LSv54]
Length = 298
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 100/220 (45%), Gaps = 16/220 (7%)
Query: 71 EPMRHFVFAAPVNMAPALCVAACELVGGH---REQAIVAAAALHVMHAASFIHENLPLSD 127
E MR+ +FA + P LC+AA + + +E + A AL +H S IH++LP D
Sbjct: 34 EAMRYSLFAGGKRIRPILCLAAADSICAQERTQENLLPVACALECIHTYSLIHDDLPAMD 93
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGN-NSGRILRVMVEMTR 186
L + K T + + +L D +L + +L+A D GN + + L + + R
Sbjct: 94 DDQL-RRGKATNHVLYGEAGAILAGDGLLSWAFDLIA--DRGKGNLTAEKRLDICHMVAR 150
Query: 187 AMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGG 246
A GS G+V GQ ++Q N D + ++ K G L C GAI G
Sbjct: 151 AAGSLGMVGGQQLDIQSE---------NKEIDFDTLATIHRSKTGALITCSIMSGAIGAG 201
Query: 247 GSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLA 286
+ K++ L YG +G+ I+ L T EEL K A
Sbjct: 202 ANAKQLHALEEYGNNIGLAFQIIDDLLDATATTEELGKTA 241
>gi|408356541|ref|YP_006845072.1| polyprenyl diphosphate synthase [Amphibacillus xylanus NBRC 15112]
gi|407727312|dbj|BAM47310.1| polyprenyl diphosphate synthase [Amphibacillus xylanus NBRC 15112]
Length = 294
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 106/200 (53%), Gaps = 13/200 (6%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P + M + + A + P L +A+ E GG +E + AA AL ++H S IH++LP
Sbjct: 30 PSTLKASMLYSIKAGGKRIRPILMIASVEAFGGKKEDVLPAAIALELVHTYSLIHDDLPA 89
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D +L + +PT + F T +L D++L ++++ ++N I++ ++
Sbjct: 90 MDDDNL-RRGQPTNHIEFGEATAILAGDSLLTLAFQVISEAENLTAEQKVTIIK---RLS 145
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
A G G+V GQ +L+ ++R++N ++++E + ++ K G L GA L
Sbjct: 146 MASGPTGMVAGQILDLEA-----EERQVN-LSELE---QIHRLKTGELLIFAVEIGAYLA 196
Query: 246 GGSEKEIELLRRYGFYVGMI 265
G ++++++ +R +G ++G+I
Sbjct: 197 GAAQEQLKAIREFGHHIGLI 216
>gi|118580818|ref|YP_902068.1| polyprenyl synthetase [Pelobacter propionicus DSM 2379]
gi|118503528|gb|ABL00011.1| farnesyl-diphosphate synthase [Pelobacter propionicus DSM 2379]
Length = 297
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 105/219 (47%), Gaps = 16/219 (7%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P +++ MR+ VFA + P L +AAC+ VGG E AI AA A+ ++H S IH++LP
Sbjct: 29 PHSLHKAMRYSVFAGGKRVRPILMLAACQAVGGDTEVAIPAACAMEMIHTYSLIHDDLPA 88
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D + PT + F +L DA+L +LL++ AG S L V+ ++
Sbjct: 89 MDDDDF-RRGNPTNHKVFGEAVAILAGDALLTEAFKLLSNPACAAGVPSEARLAVIHQIA 147
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETY--KKKEGRLHACGAACGAI 243
GS G+V GQ +++ G +D+++ Y K G L GA+
Sbjct: 148 SCAGSHGMVGGQVVDMES----------EGKSDIDLPTVQYIHTHKTGALIKAAVVAGAL 197
Query: 244 LGGGSEKEIELLRRYGFYVGMIQGIVSRRL---GPTEEI 279
LGG +++ + RYG G+ I L G TEEI
Sbjct: 198 LGGADREKLAAITRYGSAAGLAFQIADDILDIEGTTEEI 236
>gi|326494730|dbj|BAJ94484.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 358
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 122/232 (52%), Gaps = 21/232 (9%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++E MR+ + A + PALC+AAC + GG A+ AAA+ ++H S +H++LP
Sbjct: 83 PATLHEAMRYALLAGGKRVRPALCLAACVVSGGREAWAMAPAAAVEMVHTMSLVHDDLPC 142
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD------NPAGNNSGRILR 179
D L + KPT + F +L DA+L + +AS D +PA ++ R++R
Sbjct: 143 MDDDDL-RRGKPTCHVMFGEPIAVLAGDALLALAFQHMASVDSYPPDVDPA-KHTARVVR 200
Query: 180 VMVEMTRAMGSQGVVEGQYNELQCSQCDDD---DRKLNGITDVEMTYETYKKKEGRLHAC 236
+ E+ R +GS+G+V GQ +L+ + + DR + Y K L A
Sbjct: 201 AIGELARCIGSEGLVAGQVVDLEMTGSTEPVPLDR---------LEYIHLHKTAALLEAS 251
Query: 237 GAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GAI+GGGSE++IE LR+Y +G++ +V L T+ EEL K A K
Sbjct: 252 -VVIGAIIGGGSEEQIERLRKYARSIGLLFQVVDDILDVTKSSEELGKTAGK 302
>gi|333979347|ref|YP_004517292.1| polyprenyl synthetase [Desulfotomaculum kuznetsovii DSM 6115]
gi|333822828|gb|AEG15491.1| Polyprenyl synthetase [Desulfotomaculum kuznetsovii DSM 6115]
Length = 296
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P +++ +R+ +FA + P L +AA E VGG + + AA AL ++H S IH++LP
Sbjct: 29 PPVIHQAIRYSLFAGGKRLRPVLALAAAETVGGDPARVLPAACALELIHTYSLIHDDLPA 88
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D + KPT + + +L DA+L LLA + + R+++V+ E+
Sbjct: 89 MDNDDF-RRGKPTCHRVYGEAVAILAGDALLTHAFALLAKNAQNQLAPAERVVQVIEEVA 147
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
A G+ G++ GQ + + D L I ++ K G L+ GAIL
Sbjct: 148 AAAGTLGLIGGQVVDTLAADTAVDAATLEYI---------HRHKTGALYRVAVRAGAILA 198
Query: 246 GGSEKEIELLRRYGFYVGM 264
G EK++E L Y +G+
Sbjct: 199 GAKEKQLEALTIYAENLGL 217
>gi|224369661|ref|YP_002603825.1| putative polyprenyl synthetase [Desulfobacterium autotrophicum
HRM2]
gi|223692378|gb|ACN15661.1| putative polyprenyl synthetase [Desulfobacterium autotrophicum
HRM2]
Length = 316
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 12/229 (5%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K+ T V+E +GA L + E+ M H + A + P LC+AACE E
Sbjct: 23 KARQTLVNERLGAILGS---LDPRRELTCAMGHSLMAGGKRLRPILCLAACEACSAPLEP 79
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ AA AL ++H S +H++LP D L + PT + AF +T +L D +L ++
Sbjct: 80 ALPAACALEMIHTYSLVHDDLPAMDNDDL-RRGIPTCHRAFGESTAILAGDGLLTHAFQI 138
Query: 163 LASSDN--PAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVE 220
L+ +N + G L ++ ++ A G G+VEGQ ++ D+ +T +E
Sbjct: 139 LSRPENLFKVFPDPGVRLELVAIISDAAGINGMVEGQMLDMLLQNADET------VTSLE 192
Query: 221 MTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIV 269
+ + + K G + GA+ G IE L Y +G+ IV
Sbjct: 193 LLTQIHTLKTGGMIRASVVAGAVSAGADNAMIESLAVYAEKIGLAFQIV 241
>gi|410657101|ref|YP_006909472.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Dehalobacter
sp. DCA]
gi|410660137|ref|YP_006912508.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Dehalobacter
sp. CF]
gi|409019456|gb|AFV01487.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Dehalobacter
sp. DCA]
gi|409022493|gb|AFV04523.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Dehalobacter
sp. CF]
Length = 288
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 13/192 (6%)
Query: 73 MRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLI 132
M + + + P L +A ELVGG E+ + AAA+ ++H S IH++ +
Sbjct: 31 MNYSLVGGGKRIRPVLALACAELVGGRPEELVSEAAAIELIHTYSLIHDD-LPAMDDDDY 89
Query: 133 PKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQG 192
+ K + + F +L DA+L ELLA P+ + + LRV+ E +A G QG
Sbjct: 90 RRGKLSNHKVFGEAGAILAGDALLTLAFELLA---GPSAIEAQKKLRVIRETAQAAGWQG 146
Query: 193 VVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEI 252
+V GQ S + + + + D+E + + K G L A GAILGGGSE EI
Sbjct: 147 MVGGQ------SLDTLGNLENSTLADIE---QVHHLKTGALLKASARLGAILGGGSEPEI 197
Query: 253 ELLRRYGFYVGM 264
E+L Y Y+G+
Sbjct: 198 EILTSYALYLGL 209
>gi|356498727|ref|XP_003518201.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Glycine max]
Length = 395
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 82/151 (54%), Gaps = 8/151 (5%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K Y + + L A+ +++P +++E MR+ + A + P LC+ CELVGG
Sbjct: 62 KGYMIAKAHTVNQALDTAIALRDPHKIHEAMRYSLLAGGKRVCPMLCITTCELVGGTEAT 121
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
AI AA + ++H S IH+NLP + L P+ KPT K + +L D +L F E
Sbjct: 122 AIPAACTVEMIHTMSLIHDNLPCMENDDLRPE-KPT-----KHDVAVLTGDVLLAFAFEH 175
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGV 193
+A+S G + ++R + E+ +++G++G+
Sbjct: 176 VAASTE--GVSLSPVVRAIEELAKSVGTEGI 204
>gi|320529116|ref|ZP_08030208.1| putative geranyltranstransferase [Selenomonas artemidis F0399]
gi|320138746|gb|EFW30636.1| putative geranyltranstransferase [Selenomonas artemidis F0399]
Length = 295
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 107/227 (47%), Gaps = 21/227 (9%)
Query: 43 KSYWTS----VHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGG 98
K W S V + A L + ++ + + M + + A + P L +AA + VG
Sbjct: 6 KELWQSRRTLVERALQAELDRTDILDDKLRA--SMAYSLMAGGKRLRPILLMAAADAVGV 63
Query: 99 HREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPF 158
+ I AA AL ++H S IH++LP D + K T + + T +L DA+L
Sbjct: 64 DGTKFITAACALEMIHTYSLIHDDLPAMDNDD-YRRGKLTNHKVYDEGTAILAGDALLTL 122
Query: 159 GLE-LLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGIT 217
+L D PA R+LRV+ E RA G++G+V GQ +L+ ++R+++
Sbjct: 123 AFTVILRQQDVPA----ERLLRVVDETGRAAGAEGMVGGQMLDLEA-----ENRRIS--- 170
Query: 218 DVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
+E + K G L CGAIL G SE+++ L Y + G+
Sbjct: 171 -MEELRRVHMGKTGALFRAALRCGAILAGASERQLAALTAYADHFGL 216
>gi|334341587|ref|YP_004546567.1| polyprenyl synthetase [Desulfotomaculum ruminis DSM 2154]
gi|334092941|gb|AEG61281.1| Polyprenyl synthetase [Desulfotomaculum ruminis DSM 2154]
Length = 296
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 104/222 (46%), Gaps = 16/222 (7%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGH--REQAIVAAAALHVMHAASFIHENL 123
P ++E MR+ VFA + P L +AA E VG A+ A AL ++H S +H++L
Sbjct: 29 PAVIHEAMRYSVFAGGKRLRPILVLAAAEAVGDEAGAASAMPVACALELIHTYSLVHDDL 88
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRIL-RVMV 182
P D + +PT + + +L DA+L EL+ S AG S + + RV+V
Sbjct: 89 PAMDNDDF-RRGRPTNHKVYGEAMAILAGDALLTTAFELMGQS---AGKFSPQAVNRVVV 144
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
E+ +A GSQG++ GQ D N + + ++ K G L GA
Sbjct: 145 EIAQAAGSQGLIGGQVV---------DTLSENKKVEASVLEYIHRHKTGALFRAAIRSGA 195
Query: 243 ILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
IL G SE++++ L Y +G+ I L E E++ K
Sbjct: 196 ILNGASEEQLQALTVYAEQMGLAFQIKDDLLDIEGEQEKIGK 237
>gi|258515780|ref|YP_003192002.1| polyprenyl synthetase [Desulfotomaculum acetoxidans DSM 771]
gi|257779485|gb|ACV63379.1| Polyprenyl synthetase [Desulfotomaculum acetoxidans DSM 771]
Length = 296
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 10/199 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++ MR+ +FA + PA+ +AA E VGG ++ + AA AL ++H S IH++LP
Sbjct: 29 PEIIHRAMRYSIFAGGKRLRPAMLIAAAEAVGGSADKVMPAACALELIHTYSLIHDDLPS 88
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
+ KPT + F +L DA+L +LLA G ++RV+ +++
Sbjct: 89 M-DDDDYRRGKPTNHKVFGEAMAILAGDALLTMSFQLLAGLSGRNGIAPADVVRVIADIS 147
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
A G+ G++ GQ ++ + + D L I + KK G L GA+L
Sbjct: 148 AAAGTTGLIGGQVVDIVSANQEIDAGTLEYI---------HTKKTGALFRAAIRSGAVLS 198
Query: 246 GGSEKEIELLRRYGFYVGM 264
G ++E++ L Y + G+
Sbjct: 199 GADDEELKSLTNYAEHFGL 217
>gi|149925097|ref|ZP_01913408.1| geranylgeranyl pyrophosphate synthase [Plesiocystis pacifica SIR-1]
gi|149814025|gb|EDM73658.1| geranylgeranyl pyrophosphate synthase [Plesiocystis pacifica SIR-1]
Length = 294
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 90/202 (44%), Gaps = 13/202 (6%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
+P + E MR+ V M P L +AAC+ GG A+ AA AL ++HA S +H++L
Sbjct: 37 DDPGRLREAMRYAVLQGGKRMRPVLTIAACQAAGGDTAHALPAACALEMIHAYSLVHDDL 96
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE 183
P D L + KPT++ F +LV DA+L E+LA G I +
Sbjct: 97 PAMD-NDLERRGKPTVHVEFGHANAILVGDALLTDAFEVLARGTE--GVPRANIADAVTI 153
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAI 243
+ R G G+V GQ +L Q I D+E + K G L+A A G +
Sbjct: 154 LARCAGINGMVGGQALDLIAGQ---------DIADLETLERVHALKTGGLYAAAGALGGL 204
Query: 244 LGGGSEKEIEL-LRRYGFYVGM 264
+ E L RYG G+
Sbjct: 205 SSPTAAPEAATQLERYGLAFGI 226
>gi|402571586|ref|YP_006620929.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus meridiei
DSM 13257]
gi|402252783|gb|AFQ43058.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus meridiei
DSM 13257]
Length = 288
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 95/194 (48%), Gaps = 13/194 (6%)
Query: 71 EPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTS 130
E M + + + P L +A+ E VGG E + AAAAL ++H S IH++LP D
Sbjct: 29 ESMYYSLIGGGKRIRPVLALASAEAVGGKPESILRAAAALELIHTYSLIHDDLPAMDNDD 88
Query: 131 LIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGS 190
+ + + + +L DA+L + ELLAS + R LR++ E+ A G
Sbjct: 89 -YRRGRLANHKIYGEAGAILAGDALLTYAFELLASLEL---GQPERELRIIREVAVASGK 144
Query: 191 QGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEK 250
G+V GQ ++ + K+ + ++E E +K K G + A G +LGGGSE
Sbjct: 145 DGMVRGQVADITA------EGKVLTLPEIE---EIHKGKTGAILTVSARLGGVLGGGSED 195
Query: 251 EIELLRRYGFYVGM 264
+I+ L Y +G+
Sbjct: 196 DIQALTDYAQALGL 209
>gi|319792406|ref|YP_004154046.1| polyprenyl synthetase [Variovorax paradoxus EPS]
gi|315594869|gb|ADU35935.1| Polyprenyl synthetase [Variovorax paradoxus EPS]
Length = 304
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 118/258 (45%), Gaps = 16/258 (6%)
Query: 33 TMAMSTPNKNKSYWTSVH-EDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVA 91
TM TP + + W+ H + A L + V V+ PV + + MR+ V + P L +A
Sbjct: 5 TMTDWTPAR-LAGWSEPHLMRVEAALSRWVGVEAPVLLGDAMRYAVLDGGKRLRPLLVLA 63
Query: 92 ACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLV 151
A E VGG+ A+ AA A ++HA S +H++LP D ++ + KPT++ F LL
Sbjct: 64 ASEAVGGNEAAALRAACAAELIHAYSLVHDDLPCMD-NDVLRRGKPTVHVKFGEADALLA 122
Query: 152 ADAMLPFGLELLA-SSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDD 210
DA+ ELLA D + R+ + RA GSQG+ GQ +L ++
Sbjct: 123 GDALQALAFELLAPEGDEIPAATQATLCRL---LARAAGSQGMAGGQAIDLASVGIALNE 179
Query: 211 RKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVS 270
+L E ++ K G L GA G S + LR YG +G+ +V
Sbjct: 180 TQLR---------EMHRLKTGALLQGSVEMGAACGNVSAAALAALRDYGAAIGLAFQVVD 230
Query: 271 RRLGPTEEIEELKKLAFK 288
L T + + L K A K
Sbjct: 231 DILDVTADSQTLGKTAGK 248
>gi|157779735|gb|ABV71395.1| geranyl diphosphate synthase [Phalaenopsis bellina]
Length = 257
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 55/266 (20%)
Query: 36 MSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPV--NMAPALCVAAC 93
+ T ++SY ++ DI +HL +++ V P+ H + ++P+ +AP LC+AA
Sbjct: 31 LCTATSDQSYLSASSADIYSHLLRSLPATIHPSVKAPI-HSLLSSPIPPTIAPPLCLAAT 89
Query: 94 ELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVAD 153
ELVGG+ AI AA A+H++HA + PL++ F P L+ D
Sbjct: 90 ELVGGNPNSAINAACAIHLIHAVTHTRTAPPLAE---------------FSPGVLLMTGD 134
Query: 154 AMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKL 213
+L E+LA S + S R+L+
Sbjct: 135 GLLVLAYEMLARSPAVDADTSVRVLK-------------------------------EVA 163
Query: 214 NGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVG---MIQGIVS 270
V YE +EG L A AACG ILGGG+E+E+E RR G + G +++ V
Sbjct: 164 RTAAAVAAAYE--GGREGELAAGAAACGVILGGGNEEEVERGRRVGMFAGKMELVEAEVE 221
Query: 271 RRLGPTE-EIEELKKLAFKLREVNSF 295
RLG + + +++L ++R SF
Sbjct: 222 LRLGFEDAKAGAVRRLLEEMRFTQSF 247
>gi|398807911|ref|ZP_10566781.1| geranylgeranyl pyrophosphate synthase [Variovorax sp. CF313]
gi|398088542|gb|EJL79100.1| geranylgeranyl pyrophosphate synthase [Variovorax sp. CF313]
Length = 306
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 123/268 (45%), Gaps = 33/268 (12%)
Query: 36 MSTPNKNKSYWTSVH---------EDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAP 86
MS N S+W + ++ A L + V V PV + + MR+ V + P
Sbjct: 1 MSAAALNSSHWDARTLAGWSDPHLANVEAALSRWVGVDAPVLLGDAMRYAVLDGGKRLRP 60
Query: 87 ALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPN 146
L +AA E VGG++ A+ AA A ++HA S +H++LP D ++ + KPT++ F
Sbjct: 61 LLVLAASEAVGGNQAAALRAACATELIHAYSLVHDDLPCMD-NDVLRRGKPTVHVKFGEA 119
Query: 147 TELLVADAMLPFGLELLASSDN--PAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCS 204
LL DA+ ELL + PA + ++ R+ + RA GSQG+ GQ +L
Sbjct: 120 DALLAGDALQALAFELLTPDGDEIPAATQA-QLCRL---LARAAGSQGMAGGQAIDLASV 175
Query: 205 QCDDDDRKLNGITDVEMTYETYKKKEGRLHA----CGAACGAILGGGSEKEIELLRRYGF 260
++ +L E ++ K G L GAACG++ G + LR YG
Sbjct: 176 GIALNEAQLR---------EMHRLKTGALLQGSVEMGAACGSLAG----SALAALRDYGA 222
Query: 261 YVGMIQGIVSRRLGPTEEIEELKKLAFK 288
+G+ +V L T + L K A K
Sbjct: 223 AIGLAFQVVDDILDVTADSHTLGKTAGK 250
>gi|302872147|ref|YP_003840783.1| polyprenyl synthetase [Caldicellulosiruptor obsidiansis OB47]
gi|302575006|gb|ADL42797.1| Polyprenyl synthetase [Caldicellulosiruptor obsidiansis OB47]
Length = 299
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 107/227 (47%), Gaps = 13/227 (5%)
Query: 41 KNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHR 100
K + Y +++ HL + + K P +Y+ MR+ VFA + P LC+ + ++V +
Sbjct: 5 KLEEYINLSQKNVEEHLDKILKEKSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMVSKDK 64
Query: 101 E---QAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLP 157
E + + A+A+ ++H S IH++LP D ++ + KPT + F +L DA+L
Sbjct: 65 EIDRKILDIASAIELIHTYSLIHDDLPAMD-NDVLRRGKPTSHVVFGEAIAILAGDALLN 123
Query: 158 FGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGIT 217
E+ + G +++ + A G +G++ GQ ++ S D I
Sbjct: 124 LAAEVCLNWILNYGCEKN-LVKAAKYLFWASGVEGMIGGQVIDITNSGQD--------IK 174
Query: 218 DVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
E+ +E + KK RL CGA++ G + + L YG +G+
Sbjct: 175 SEELLFEMHLKKTSRLIQASCVCGALVAGAEDSVVSDLEEYGKNLGL 221
>gi|210622494|ref|ZP_03293199.1| hypothetical protein CLOHIR_01147 [Clostridium hiranonis DSM 13275]
gi|210154207|gb|EEA85213.1| hypothetical protein CLOHIR_01147 [Clostridium hiranonis DSM 13275]
Length = 295
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 11/202 (5%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
+ E M + + + + P L + AC +VGG + AI AAA+ ++H S IH++LP D
Sbjct: 32 IMEAMNYSLSSGGKRLRPVLTLEACRIVGGDTDNAIPFAAAIEMIHTYSLIHDDLPALDN 91
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
L + + T + F +L DA+L F E + ++ N R LR E+ +
Sbjct: 92 DDL-RRGRATNHKVFGEAMAILAGDALLNFAYETML-KESIGKENPERYLRATYEIAKGA 149
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
G G+V GQ ++Q KL+ I ++ K + GA +GG
Sbjct: 150 GIYGMVGGQVVDVQSENMQIPKEKLDYI---------HENKTAAMMVGCMRAGAAIGGAD 200
Query: 249 EKEIELLRRYGFYVGMIQGIVS 270
EK++EL+ Y +G+ IV
Sbjct: 201 EKQMELITDYANKIGLAFQIVD 222
>gi|406990422|gb|EKE10081.1| geranyltranstransferase (farnesyl-diphosphate synthase) [uncultured
bacterium]
Length = 300
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 99/205 (48%), Gaps = 14/205 (6%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
++E MR+ V + L A L E A+ AAL ++HA S +H++LP D
Sbjct: 42 LHEAMRYSVLGGGKRLRAFLVYATSHLYSVPLEIALKTGAALEIVHAYSLVHDDLPAMDD 101
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
+L ++KPT + A+ T +LV DA++P E+L+S P + +L + +++ +
Sbjct: 102 ATL-RRNKPTCHKAYGEATAVLVGDALIPLAFEMLSSL--PLSKAARLVL--IKALSKVI 156
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
GSQG+V GQ +L T+V+ E + K G L + GA LGG
Sbjct: 157 GSQGLVAGQMMDLGQE---------GPKTNVKDLLELQRLKTGLLFSFATEAGAFLGGAP 207
Query: 249 EKEIELLRRYGFYVGMIQGIVSRRL 273
K+ E L+ +G G + +V L
Sbjct: 208 LKDREALKNFGLLFGQMFQMVDDWL 232
>gi|114566119|ref|YP_753273.1| polyprenyl synthetase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114337054|gb|ABI67902.1| farnesyl-diphosphate synthase [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 301
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Query: 65 EPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLP 124
+P +++ M + +F + P + + ++ GG EQAI A AL ++H+ S +H++LP
Sbjct: 33 DPPLIHQAMHYAIFNGGKRLRPIMVLEGAKIAGGEAEQAIPVACALEMIHSYSLVHDDLP 92
Query: 125 LSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEM 184
D + +PT + F +L DA+L ELL+ ++ +G LRV+ E+
Sbjct: 93 CMDDDDF-RRGQPTCHRVFGEANAVLTGDALLTAAFELLSEKNSVSGIKPDTTLRVIAEI 151
Query: 185 TRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAIL 244
RA GS+G++ GQ +L+ I D E + + K G+L GAI+
Sbjct: 152 ARASGSRGMIGGQILDLEAE---------GKIIDYESLRKLHCLKTGQLFRAALRTGAIV 202
Query: 245 GGGSEKEIELLRRYGFYVGM 264
GG EK + L Y G+
Sbjct: 203 GGIGEKGLLALSDYADNFGL 222
>gi|315924280|ref|ZP_07920504.1| geranyltranstransferase [Pseudoramibacter alactolyticus ATCC 23263]
gi|315622441|gb|EFV02398.1| geranyltranstransferase [Pseudoramibacter alactolyticus ATCC 23263]
Length = 309
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 100/222 (45%), Gaps = 14/222 (6%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P + M++ +FA + P L + C + GG AI A A+ ++H S IH++LP
Sbjct: 40 PDIIVSAMKYSLFAGGKRVRPILLMETCAMFGGDERVAIPFACAIEMIHTYSLIHDDLPA 99
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA---SSDNPAGNNSGRILRVMV 182
D L + +PT + + N +L DA+L +E + PA R + +
Sbjct: 100 MDNDDL-RRGEPTNHKVYGENIAILAGDALLNAAVETAVEGIETMEPA--ERARGIAALS 156
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+ RA G G++ GQ +L +DDD I + ++ Y + K G L GA
Sbjct: 157 LLMRAAGVNGMIGGQTGDL---LAEDDD----AINEDKIVY-IHAHKTGALLTAAVLIGA 208
Query: 243 ILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
+L G SE E + LR YG +GM +V L E L K
Sbjct: 209 VLAGASEDEQQALRNYGSAIGMAFQVVDDILDVESETAVLGK 250
>gi|147677529|ref|YP_001211744.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum
thermopropionicum SI]
gi|146273626|dbj|BAF59375.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum
thermopropionicum SI]
Length = 294
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 25/219 (11%)
Query: 58 RQAVVVKEPVEVYEP------------MRHFVFAAPVNMAPALCVAACELVGGHREQAIV 105
++A +V+E +E Y P MR+ V + PAL +A E VGG+ +
Sbjct: 10 KKAALVEEALERYLPPPDAYPPLIHHAMRYSVLGGGKRLRPALVMAGAEAVGGNAADVLP 69
Query: 106 AAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLAS 165
AA A+ ++H S +H++LP D + + T + + +L DA+L ELLA+
Sbjct: 70 AACAVELIHTYSLVHDDLPAMDNDD-YRRGRLTNHKVYGEAAAILAGDALLTLAFELLAN 128
Query: 166 SDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYET 225
+D N I+RV+ E A G+ G++ GQ + + + D+ L I
Sbjct: 129 NDRARPEN---IVRVIREAAAAAGTMGLIGGQVVDTFSAGKEIDESTLEYI--------- 176
Query: 226 YKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
++ K G L+ GA+L G E+++ L Y ++G+
Sbjct: 177 HRHKTGALYRFSVRAGAMLAGAQEEQLASLTAYAEHLGL 215
>gi|84489654|ref|YP_447886.1| IdsA [Methanosphaera stadtmanae DSM 3091]
gi|84372973|gb|ABC57243.1| IdsA [Methanosphaera stadtmanae DSM 3091]
Length = 327
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 99/218 (45%), Gaps = 22/218 (10%)
Query: 51 EDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAAL 110
E+I + ++ EP +YE + + A PAL + +C+ VGG E+A+ AAAA+
Sbjct: 12 EEIDVVIDDSLSKLEPESLYESSEYLIKAGGKKFRPALTLLSCQAVGGKPEKALKAAAAI 71
Query: 111 HVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASS--DN 168
+ H S IH+++ +D T + KP ++ + +L D++ ELL+ S DN
Sbjct: 72 ELTHTFSLIHDDIMDNDDTR---RGKPAVHKVWGEPLAILAGDSLFAKSFELLSQSAEDN 128
Query: 169 PAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITD--VEMTYETY 226
A L+V+ + EGQ ++ N D + M Y
Sbjct: 129 IAYERVVDALQVLTN-----SCINICEGQALDMAFEDT------FNVTKDEYMNMIY--- 174
Query: 227 KKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
KK G L GAI+GG S EI+ LR YG +G+
Sbjct: 175 -KKTGDLITASTTIGAIMGGASSNEIQALRTYGKQIGL 211
>gi|390959330|ref|YP_006423087.1| geranylgeranyl pyrophosphate synthase [Terriglobus roseus DSM
18391]
gi|390414248|gb|AFL89752.1| geranylgeranyl pyrophosphate synthase [Terriglobus roseus DSM
18391]
Length = 303
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 108/262 (41%), Gaps = 14/262 (5%)
Query: 65 EPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHR-EQAIVAAAALHVMHAASFIHENL 123
+P ++ MRH VFA + P L + + ++ G + A AA+ ++H S IH++L
Sbjct: 30 QPHNIHRAMRHSVFAGGKRLRPLLVIESARMIAGDLPDGAADVGAAIEMLHTYSLIHDDL 89
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE 183
P D L + KPT + + +L DA+ E LA A + V +
Sbjct: 90 PALDNDDL-RRGKPTCHVVYGEAMAILAGDALQTLAYETLAKLSGDAAAKIEIVKEVAIA 148
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAI 243
+GS+G+ G Q + + +K E+ ++ K G L G +
Sbjct: 149 TGTGVGSEGLAPGMIGG-QVMDIEGEGQKPT----AELVEAIHRSKTGALITVSIVAGGL 203
Query: 244 LGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVNSFN------- 296
+GG S E+ LRR+G G+ IV L T+ EL K A K +
Sbjct: 204 IGGASADEVMHLRRFGQRAGLAFQIVDDILDVTQSSAELGKTAGKDTASDKATWPAVFGL 263
Query: 297 DENAEVIFSLVDDNITHVLGFN 318
D + E L+ D + + GF
Sbjct: 264 DASRETAAELLRDGLAELAGFG 285
>gi|15606136|ref|NP_213513.1| geranylgeranyl pyrophosphate synthase [Aquifex aeolicus VF5]
gi|6225572|sp|O66952.1|ISPA_AQUAE RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|2983323|gb|AAC06913.1| geranylgeranyl pyrophosphate synthase [Aquifex aeolicus VF5]
Length = 262
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 123/274 (44%), Gaps = 26/274 (9%)
Query: 48 SVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAA 107
+ E I L + + + P E+ E M+++ + P VA +GG+ + AI
Sbjct: 6 TWKEKIEKRLNEILKPEGPEELIEAMKYYPLQKGKRIRPLFTVAVASALGGNEDDAITVG 65
Query: 108 AALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD 167
+ + ++H S IH++LP D + + PT + F LL DA+L + E+L+ +
Sbjct: 66 SGIELIHNYSLIHDDLPCMD-NDVWRRGLPTCHIKFGEAMALLAGDALLTYTFEVLSQRE 124
Query: 168 NPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYK 227
N + IL + + + GS G+V GQ +++ G D+ YE
Sbjct: 125 NYKTLSCEEILEINKIIAQKAGSNGMVGGQVLDIK------------GYEDL---YEVSV 169
Query: 228 KKEGRLHACGAACGAILGGGSE--KEIELL-RRYGFYVGMIQGIVSR-----RLGPTEEI 279
KK G L CGA++ E KE+E + R+ G M+ + + +LG +
Sbjct: 170 KKTGALFEACFMCGAVVAKRREKLKEMESIGRKVGLLFQMVDDYLDKDGFYEKLGECLK- 228
Query: 280 EELKKLAFKLREVNSFND-ENAEVIFSLVDDNIT 312
EE+KKL +L+E F + + + L+ IT
Sbjct: 229 EEIKKLYEELKEKEIFKESQELRYLLDLIYKRIT 262
>gi|386714769|ref|YP_006181092.1| geranyltranstransferase [Halobacillus halophilus DSM 2266]
gi|384074325|emb|CCG45818.1| geranyltranstransferase [Halobacillus halophilus DSM 2266]
Length = 294
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 107/219 (48%), Gaps = 13/219 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P + + M + + A + P L +A E G ++ + A L ++H S IH++LP
Sbjct: 30 PGRLQDAMLYSIEAGGKRLRPILLIATAEAFGAKVDKTMAVACGLEMIHTYSLIHDDLPA 89
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D + PT + F T +L DA+L E++ + + N+ R+ ++ E++
Sbjct: 90 MDNDDF-RRGLPTSHRRFDEATAILAGDALLTLSSEIIVN--DQELNDRERVF-LIQELS 145
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
RA G+ G+VEGQ ++ +D+++ +E +KKK G+L GA LG
Sbjct: 146 RASGASGMVEGQMQDMLS-----EDKQIP----LEELENIHKKKTGKLLNFAIIAGAFLG 196
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
S+++ + +++ G +G+I I L T + E++ K
Sbjct: 197 NASDEKFDEMKKMGEALGLIFQIQDDILDVTGDAEKIGK 235
>gi|87124785|ref|ZP_01080633.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9917]
gi|86167664|gb|EAQ68923.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9917]
Length = 315
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 113/245 (46%), Gaps = 12/245 (4%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
+Y + ++ + L ++ + P + E MR+ + A + P LC+AACEL GG A
Sbjct: 24 AYLAARKAEVESALDASLPPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGDPALA 83
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ A AL ++H S IH++LP D L + +PT + + +L DA+L E++
Sbjct: 84 MPTAVALEMIHTMSLIHDDLPAMDDDDL-RRGRPTNHKVYGEAVAILAGDALLTRAFEMV 142
Query: 164 ASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTY 223
A G + R+L+V+ E++ G+ G+V GQ +L+ D L Y
Sbjct: 143 ALRSP--GVPAERLLQVVAELSLVAGAPGLVGGQVVDLESEGKQVDLETLE--------Y 192
Query: 224 ETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELK 283
K L AC GA++ G I+ LR Y +G+ IV L T + L
Sbjct: 193 IHLHKTGALLRAC-VITGALIAGADASRIDSLRTYARGIGLAFQIVDDILDVTASSDVLG 251
Query: 284 KLAFK 288
K A K
Sbjct: 252 KTAGK 256
>gi|169333801|ref|ZP_02860994.1| hypothetical protein ANASTE_00187 [Anaerofustis stercorihominis DSM
17244]
gi|169259366|gb|EDS73332.1| polyprenyl synthetase [Anaerofustis stercorihominis DSM 17244]
Length = 294
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 11/220 (5%)
Query: 65 EPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLP 124
+P ++E + +F + P L + +C+ VGG +A+ AA+ ++H S IH++LP
Sbjct: 27 KPKSIFESFNYSLFVGGKRIRPILLMESCKCVGGDTNEALPLMAAMEMIHTYSLIHDDLP 86
Query: 125 LSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEM 184
D L + KPT + + T LL D++L E + + + R + M +
Sbjct: 87 CMDDDEL-RRGKPTNHTVYGEATALLAGDSLLNLAYETMLKG-AKSSKDINRYVEAMNVI 144
Query: 185 TRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAIL 244
+ G +G++ GQ +++ + D L+ I D K G + GA++
Sbjct: 145 ADSAGVKGMIAGQVMDMESEGKEPDGETLDFIHD---------NKTGAILRASVISGAVV 195
Query: 245 GGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
GG ++ E++ L Y +G++ +V L + E L K
Sbjct: 196 GGATDDELKNLSEYARAIGLMFQVVDDILDVVSDEETLGK 235
>gi|171915589|ref|ZP_02931059.1| geranylgeranyl pyrophosphate synthase [Verrucomicrobium spinosum
DSM 4136]
Length = 295
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 116/253 (45%), Gaps = 25/253 (9%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKE--PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHR 100
KSY T + A L + V E PV +++ MRH +FA + P LC+AA E GG
Sbjct: 6 KSYLTQRVAFVDAALDRFVAAAETRPVTIHKAMRHSLFAGGKRLRPILCLAAAEACGGSL 65
Query: 101 EQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGL 160
E A+ AA A+ +H S IH++LP D + + PT + F LL DA+
Sbjct: 66 ENALYAACAVECLHTYSLIHDDLPCMDDDDM-RRGVPTCHKVFGEAMALLAGDALQALSF 124
Query: 161 ELLASS-----DNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNG 215
EL+A + +PA +++E+ R GS +V GQ +L+ + +KL G
Sbjct: 125 ELVAQTPVTHRHSPAA--------MVLELARTAGSLHLVGGQVADLE-----GEGKKL-G 170
Query: 216 ITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGP 275
I D+ +E+ K L G + +++ L +G G+ I+ L
Sbjct: 171 IEDLRYIHES---KTAALLTSSVKLGGMSADAQLDQVQALHDFGMATGLAFQIIDDILDV 227
Query: 276 TEEIEELKKLAFK 288
T+ E+L K A K
Sbjct: 228 TQTTEKLGKSAGK 240
>gi|190571159|ref|YP_001975517.1| geranyltranstransferase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213018563|ref|ZP_03334371.1| geranyltranstransferase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|373450650|ref|ZP_09542625.1| farnesyl diphosphate synthase [Wolbachia pipientis wAlbB]
gi|190357431|emb|CAQ54865.1| geranyltranstransferase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995514|gb|EEB56154.1| geranyltranstransferase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|371932139|emb|CCE77637.1| farnesyl diphosphate synthase [Wolbachia pipientis wAlbB]
Length = 260
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 97/198 (48%), Gaps = 25/198 (12%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
++ MR+ + A ++ L +A+ + E+AI AAAA+ +HA S IH++LP D
Sbjct: 25 KLISAMRYVLLAPAKHIRSFLVIASSSIFNIKVEKAITAAAAIEFIHAYSLIHDDLPCMD 84
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
+ + +P+ + F T +L DA+L E+L+ + I++V +++A
Sbjct: 85 NSD-TRRGQPSCHKKFGEATAVLAGDALLTLAFEVLSLLN-------CEIIKV---LSQA 133
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
+G +G+V GQ ++ D + E + K +L A GAI+GG
Sbjct: 134 IGMKGMVGGQILDIGA--------------DFDKIKEIHLMKTAKLFAASCEIGAIIGGA 179
Query: 248 SEKEIELLRRYGFYVGMI 265
++KE E L YG +G+I
Sbjct: 180 TDKEREALYNYGINLGLI 197
>gi|353328859|ref|ZP_08971186.1| geranyltranstransferase [Wolbachia endosymbiont wVitB of Nasonia
vitripennis]
Length = 260
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 95/194 (48%), Gaps = 25/194 (12%)
Query: 72 PMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSL 131
MR+ + A ++ L +A+ + E+AI AAAA+ +HA S IH++LP D +
Sbjct: 29 AMRYVLLAPAKHIRSFLVIASSSIFNIKVEKAITAAAAIEFIHAYSLIHDDLPCMDNSD- 87
Query: 132 IPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQ 191
+ +P+ + F T +L DA+L E+L+ + I++V +++A+G +
Sbjct: 88 TRRGQPSCHKKFGEATAVLAGDALLTLAFEVLSLLN-------CEIIKV---LSQAIGMK 137
Query: 192 GVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKE 251
G+V GQ ++ D + E + K +L A GAI+GG ++KE
Sbjct: 138 GMVGGQILDIGA--------------DFDKIKEIHLMKTAKLFAASCEIGAIIGGATDKE 183
Query: 252 IELLRRYGFYVGMI 265
E L YG +G+I
Sbjct: 184 REALYNYGINLGLI 197
>gi|255994613|ref|ZP_05427748.1| geranyltranstransferase [Eubacterium saphenum ATCC 49989]
gi|255993326|gb|EEU03415.1| geranyltranstransferase [Eubacterium saphenum ATCC 49989]
Length = 297
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 122/262 (46%), Gaps = 24/262 (9%)
Query: 52 DIGAHLRQAVVVKEPVE--VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAA 109
DI +R+ ++ KE + + E M + ++A + P L + A VGG + AAA
Sbjct: 11 DIDTKMREILLSKEEIAKPLREAMEYSLYAGGKRVRPVLLMEAARAVGGDPGSVLDYAAA 70
Query: 110 LHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL----AS 165
+ +H S IH++LP D + K T + F +L D + E++ A
Sbjct: 71 IEFIHTYSLIHDDLPALDDDEY-RRGKKTNHKVFGEAMAILAGDGLQALAYEVMLSCIAK 129
Query: 166 SDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYET 225
SDN G+ + ++ E+ A G++ +V GQ + + C D D + M +
Sbjct: 130 SDN-MGDEILKKIKAANEIVMAAGTEAMVSGQV--MDINSCSDKDS-------LTMLEKM 179
Query: 226 YKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKL 285
++ K G L GAIL G E+++ R+YG +G+ +V +L + + + + K
Sbjct: 180 HRMKTGALITAAVVVGAILAGADERQVAAFRKYGENIGLAFQMVDDKLDVSGDSKNMGK- 238
Query: 286 AFKLREVNSFNDENAEVIFSLV 307
++N+ ++ N ++ ++++
Sbjct: 239 -----DINA-DERNEKITYTIL 254
>gi|253576322|ref|ZP_04853652.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251844215|gb|EES72233.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 302
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 12/223 (5%)
Query: 43 KSYWTSVHEDIGAHLRQAV--VVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHR 100
++Y + E + L ++ + P + M + + A + P L VAA E +GG R
Sbjct: 9 EAYMKEIAEAVSTRLSSSLPAAWQVPETLSRAMDYSLMAGGKRLRPLLVVAAAEALGGSR 68
Query: 101 EQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGL 160
+ A+ A A+ ++H S IH++LP D + KPT + F +L D +L
Sbjct: 69 DAAMPVACAVEMVHTYSLIHDDLPALDNDDF-RRGKPTNHKVFGEAMAILAGDGLLTHAF 127
Query: 161 ELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVE 220
+ + G + L ++ E++R G G+V GQ ++Q Q G+TD++
Sbjct: 128 YSVVQASRKQGVPAEASLAIVEELSRFAGPGGMVGGQVADMQGEQ---------GVTDLD 178
Query: 221 MTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVG 263
++ K G L G + G+ +++E L RYG +G
Sbjct: 179 QLRYIHEHKTGDLIVFSVRAGGHIASGNAEQLEALERYGRALG 221
>gi|398827728|ref|ZP_10585931.1| geranylgeranyl pyrophosphate synthase [Phyllobacterium sp. YR531]
gi|398219026|gb|EJN05523.1| geranylgeranyl pyrophosphate synthase [Phyllobacterium sp. YR531]
Length = 305
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 13/229 (5%)
Query: 36 MSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACEL 95
+S ++ S + E + H R + + P + MRH V + P L + + L
Sbjct: 11 LSLQHRASSVEMLLSELLSEHSRNGEITRPP-RLLAAMRHGVLNGGKRLRPFLVMESAAL 69
Query: 96 VGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAM 155
G A+ AAAL +H+ S +H++LP D L + +PT++ F +L D++
Sbjct: 70 FGADNSAALRVAAALECIHSYSLVHDDLPAMDNDDL-RRGQPTVHRKFDEAAAILAGDSL 128
Query: 156 LPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNG 215
L + EL+AS + + R+ ++ E+ RA G G+ GQ +L+ + D++ G
Sbjct: 129 LTYAFELIASEETEISAQA-RV-SLITELARAAGIGGMTGGQTLDLEAEKVKPDEQ---G 183
Query: 216 ITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
I ++ K G L G+I+G S ++ E L YG +G+
Sbjct: 184 IIQLQAM------KTGALIRFACESGSIIGNASLQDRERLAEYGSAIGL 226
>gi|451982552|ref|ZP_21930861.1| Geranylgeranyl pyrophosphate synthase homolog [Nitrospina gracilis
3/211]
gi|451760198|emb|CCQ92154.1| Geranylgeranyl pyrophosphate synthase homolog [Nitrospina gracilis
3/211]
Length = 296
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 10/208 (4%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
PV ++E M + + A + P L +AA E VGG R+ + A A +H + IH++LP
Sbjct: 29 PVSIHESMHYSLSAGGKRLRPTLLIAATEAVGGSRKDVLPFAVAAEFLHTYTLIHDDLPA 88
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D SL + KPT + F +L DA+L L+ ++ ILR EM
Sbjct: 89 LDNDSL-RRGKPTNHKVFGEAIAILAGDALLTQAFVLMTNAFLMEAIPHENILRASHEMA 147
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
+A+ S GV+ GQ +L+ + L I + K G GAILG
Sbjct: 148 QALSSTGVIGGQVVDLESEGKPIEASTLEYI---------HIYKTGFFFKSCVRVGAILG 198
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRL 273
+++ + R+G ++G+ I+ L
Sbjct: 199 RADSQQLGAISRFGAHIGLAFQIIDDIL 226
>gi|302036073|ref|YP_003796395.1| geranyltranstransferase [Candidatus Nitrospira defluvii]
gi|300604137|emb|CBK40469.1| Geranyltranstransferase [Candidatus Nitrospira defluvii]
Length = 326
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 10/216 (4%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
++E MR+ + A + P L +AA E +G + A +L +H S IH++LP D
Sbjct: 62 LHESMRYSLMAGGKRVRPILTIAAAEAIGATPPGLMAVACSLEFIHTYSLIHDDLPSMDN 121
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
+ KPT + + +L DA+L +L++ + G R +R++ E+
Sbjct: 122 DDF-RRGKPTNHKVYGEAMAILAGDALLTMAFDLISRPELMKGCEPTRQVRILQELAYGS 180
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
G+ G+V GQ ++Q D D L I +K K G L GA+ G +
Sbjct: 181 GNMGMVGGQVFDIQAENQDIDLPTLQNI---------HKHKTGMLIRAAVRMGAMAAGAT 231
Query: 249 EKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
+++++ + Y +G+ I L T EEL K
Sbjct: 232 DRQLDDMTGYAEDIGLAFQIADDVLNVTGTREELGK 267
>gi|148264230|ref|YP_001230936.1| polyprenyl synthetase [Geobacter uraniireducens Rf4]
gi|146397730|gb|ABQ26363.1| farnesyl-diphosphate synthase [Geobacter uraniireducens Rf4]
Length = 297
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 99/217 (45%), Gaps = 12/217 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P +++ MR+ VFA + P L +AAC+ VGG A+ AA A+ ++H S IH++LP
Sbjct: 29 PFSLHKSMRYSVFAGGKRIRPILMLAACDAVGGDISLAMPAACAMEMIHTYSLIHDDLPA 88
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D + PT + F +L DA+L L++ + A +LRV+ E++
Sbjct: 89 MDDDDF-RRGNPTNHKVFGEAIAILAGDALLTEAFILMSRVEPSASLPPEAVLRVIQEIS 147
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
GS G+V GQ +++ D+ + K G L GAILG
Sbjct: 148 HCAGSHGMVGGQVVDMESEG--------KAEMDLATVQYIHTHKTGALIKASVKAGAILG 199
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRL---GPTEEI 279
G E + L YG +G+ I L G TEEI
Sbjct: 200 GADEARLASLTTYGEAIGLAFQIADDILDIEGTTEEI 236
>gi|108805545|ref|YP_645482.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
gi|108766788|gb|ABG05670.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
Length = 299
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 113/243 (46%), Gaps = 15/243 (6%)
Query: 46 WTSVHEDIGAHLRQAVVVKEPV--EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
+ ++ E I +L +EP + E MR+ + A + P LC+ + L G E+
Sbjct: 12 FLALREVIEEYLEGLRFTEEPALERLQEAMRYSLLAGGKRVRPLLCMESASLFGAPPERV 71
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ +AAA+ ++H S IH++LP D + KPT + F +L DA FG L
Sbjct: 72 LPSAAAIELIHTFSLIHDDLPAMDNDDF-RRGKPTSHKKFGEAMAILAGDAF--FGESLA 128
Query: 164 ASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTY 223
+D+ G+ ++L V+ E+ A G G+ GQ +L+ + + G ++E+
Sbjct: 129 LITDHQEGSAE-QVLAVVRELAHATGLAGLAGGQALDLEHTG------RRAGPKELEL-- 179
Query: 224 ETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELK 283
T+ K G L A GAIL G E+ +E + RY +G+ IV L E L
Sbjct: 180 -THHHKTGALIRASARIGAILAGAGEEGLEAISRYATELGLCFQIVDDVLDAVGSSERLG 238
Query: 284 KLA 286
K A
Sbjct: 239 KRA 241
>gi|506378|gb|AAA96328.1| geranylgeranyl pyrophosphate synthase, partial [Arabidopsis
thaliana]
Length = 157
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 88/168 (52%), Gaps = 11/168 (6%)
Query: 109 ALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDN 168
A+ +MH S I ++LP D L + KPT + F + +L A+L E L +D
Sbjct: 1 AVEMMHTMSLIKDDLPCMDNDDL-RRGKPTTHKVFGESVAILSGGALLALAFEHLTEADV 59
Query: 169 PAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKK 228
+S +++R + E+ +++G++G+V GQ +L + +D G+ D+E +
Sbjct: 60 ----SSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDV---GLEDLEYIH---VH 109
Query: 229 KEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPT 276
K G L A GA++GGG+EKEIE +R + +G++ +V L T
Sbjct: 110 KTGSLLEASAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDVT 157
>gi|56477949|ref|YP_159538.1| polyprenyl synthetase [Aromatoleum aromaticum EbN1]
gi|56313992|emb|CAI08637.1| Polyprenyl synthetase (EC 2.5.1.10),gene: ISPA OR NE1160
[Aromatoleum aromaticum EbN1]
Length = 298
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 17/226 (7%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++E MR+ V + P L AA LVG E+ A A+ ++HA S +H++LP
Sbjct: 32 PARLHEAMRYAVLGGGKRIRPLLVHAAGGLVGAAPERLDKVACAVELIHAYSLVHDDLPC 91
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D ++ + KPT++ + T LLV D++ + L S++P + L ++ ++
Sbjct: 92 MD-NDVLRRGKPTVHVEYDDATALLVGDSLQALAFQSL--SEHPLTEDPSEQLSMITQLA 148
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHAC---GAACGA 242
RA GS+G+ GQ +L ++ E+ Y K + A GAACGA
Sbjct: 149 RASGSRGMAGGQAIDLAAVG--------KQLSREELEYMHIHKTGALIRASVLLGAACGA 200
Query: 243 ILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
L +E L YG VG++ +V L + L K A K
Sbjct: 201 RL---DSDRLERLDHYGKLVGLLFQVVDDILDTQSDTATLGKTAGK 243
>gi|289547882|ref|YP_003472870.1| Geranyltranstransferase [Thermocrinis albus DSM 14484]
gi|289181499|gb|ADC88743.1| Geranyltranstransferase [Thermocrinis albus DSM 14484]
Length = 264
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 8/161 (4%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
S W E + LRQ + EP+ +YE M ++ + P L C+ +GG+ E A
Sbjct: 5 SLW---KEKVEVKLRQILAPSEPLLLYEAMSYYPLQGGKRIRPLLLCGVCDALGGNVEDA 61
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSK--PTMYHAFKPNTELLVADAMLPFGLE 161
+V A+ ++H S IH++LP D P+ + P+ + AF + LL DA+L +
Sbjct: 62 VVVGCAIELIHNYSLIHDDLPALDND---PQRRGLPSCHIAFGEDIALLAGDALLTLAFQ 118
Query: 162 LLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQ 202
+L+ +L ++ E++R GS+G+V GQ +++
Sbjct: 119 VLSDVSQFNQVEPSDLLLIIHEISRRAGSEGMVGGQVMDIR 159
>gi|312127936|ref|YP_003992810.1| polyprenyl synthetase [Caldicellulosiruptor hydrothermalis 108]
gi|311777955|gb|ADQ07441.1| Polyprenyl synthetase [Caldicellulosiruptor hydrothermalis 108]
Length = 299
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 13/212 (6%)
Query: 56 HLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHR---EQAIVAAAALHV 112
HL + + + P +Y+ MR+ VFA + P LC+ + ++V + E+ + A+A+ +
Sbjct: 20 HLEKILKERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMVSKDQIVDEKILDIASAIEL 79
Query: 113 MHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGN 172
+H S IH++LP D ++ + KPT + F +L DA+L E+ G
Sbjct: 80 IHTYSLIHDDLPAMD-NDVLRRGKPTNHVVFGEAIAILAGDALLNLAAEVCMDWILRYGC 138
Query: 173 NSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGR 232
+++ + A G +G++ GQ ++ S D I E+ +E + KK R
Sbjct: 139 REN-LIKAAKYLFWASGVEGMIGGQVIDITNSGQD--------IKSEELLFEMHLKKTSR 189
Query: 233 LHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
L CGA++ G + + L YG +G+
Sbjct: 190 LIQASCVCGALVAGAEDDVVSDLEEYGKNLGL 221
>gi|146304882|ref|YP_001192198.1| geranyltranstransferase [Metallosphaera sedula DSM 5348]
gi|145703132|gb|ABP96274.1| geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase
[Metallosphaera sedula DSM 5348]
Length = 327
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 108/221 (48%), Gaps = 23/221 (10%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
E+YE R+ + A + P + V + +L+GG R +AI+A AA+ V+H + IH+++ D
Sbjct: 28 ELYEASRYLISAGGKRLRPLVVVLSSDLLGGERHRAILAGAAVEVLHNFTLIHDDIMDQD 87
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASS-DNPAGNNSGRILRVMVEMTR 186
T + PT++ + T +L D + ++L S +G+ + ++L
Sbjct: 88 TTR---RGIPTVHVKWGIPTAILAGDLLHAKAFQILTESIKGLSGDVAYKVLDCF----- 139
Query: 187 AMGSQGVV---EGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAI 243
S+ V+ EGQ +++ + D K E ++K +L AC A G +
Sbjct: 140 ---SRSVIVVSEGQAMDMEFEKRWDIREK--------DYLEMIRRKTAQLFACSAYLGGV 188
Query: 244 LGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
L GGSE+E+ L +G +G+ IV LG T + +EL K
Sbjct: 189 LAGGSEEEVNNLYEFGEKMGIAFQIVDDILGITADEKELGK 229
>gi|312622735|ref|YP_004024348.1| polyprenyl synthetase [Caldicellulosiruptor kronotskyensis 2002]
gi|312203202|gb|ADQ46529.1| Polyprenyl synthetase [Caldicellulosiruptor kronotskyensis 2002]
Length = 299
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 105/225 (46%), Gaps = 13/225 (5%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHRE- 101
+ Y + I HL + + + P +Y+ MR+ VFA + P LC+ + +++ +E
Sbjct: 7 EEYINLSQKKIEEHLEKILKERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMLSKDQEI 66
Query: 102 --QAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFG 159
+ + A+A+ ++H S IH++LP D ++ + KPT + F +L DA+L
Sbjct: 67 NQKVLDIASAIELIHTYSLIHDDLPAMD-NDILRRGKPTNHVVFGEAIAILAGDALLNLA 125
Query: 160 LELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDV 219
E+ G + +++ + A G +G++ GQ ++ S D I
Sbjct: 126 AEVCMDWILRYGCDKN-LVKAAKYLFWASGVEGMIGGQVIDITNSGQD--------IKSE 176
Query: 220 EMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
E+ +E + KK RL CGA++ G + + L YG +G+
Sbjct: 177 ELLFEMHLKKTSRLIQASCVCGALVAGAEDDVVFDLEEYGKNLGL 221
>gi|171060046|ref|YP_001792395.1| polyprenyl synthetase [Leptothrix cholodnii SP-6]
gi|170777491|gb|ACB35630.1| Polyprenyl synthetase [Leptothrix cholodnii SP-6]
Length = 298
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 102/237 (43%), Gaps = 10/237 (4%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L + V P E+ MR+ V + P L +AA V GH E A+ AA A+ ++HA
Sbjct: 21 LDRQVPADAPAELGLAMRYGVLDGGKRLRPLLVLAAAGCVDGHPEAALRAACAVELIHAY 80
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGR 176
S IH+++P D ++ + KPT++ + +L DAM E+L D G
Sbjct: 81 SLIHDDMPCMD-NDVLRRGKPTVHVQYGEARAMLAGDAMQALAFEVLTPEDTDDGVPPAL 139
Query: 177 ILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHAC 236
R+ + RA G G+ GQ +L + D + + +K G L
Sbjct: 140 QARLCSLLARASGVLGMAGGQAIDLA---------HVGKQMDEAALQDMHGRKTGALLQA 190
Query: 237 GAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVN 293
GA G + + + L YG+ +G+ +V L T+ E L K A K + N
Sbjct: 191 SVLMGAACGRTTPAQWQALADYGWAIGLAFQVVDDILDVTQCAETLGKTAGKDADQN 247
>gi|404493293|ref|YP_006717399.1| trans-isoprenyl diphosphate synthase [Pelobacter carbinolicus DSM
2380]
gi|77545350|gb|ABA88912.1| trans-isoprenyl diphosphate synthase [Pelobacter carbinolicus DSM
2380]
Length = 296
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 10/199 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P+ +++ MR+ FAA + P L +AACE VGG ++ + AA A+ ++H S IH++LP
Sbjct: 29 PISLHKAMRYSTFAAGKRIRPILMMAACEAVGGTVDKVMPAACAMEMIHTYSLIHDDLPA 88
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
+ +PT + + +L DA+L LL+ G + RV ++
Sbjct: 89 M-DDDDFRRGRPTCHKVYGDALAILAGDALLTEAFILLSRLGEDGGVSLEAARRVSADIA 147
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
R GS G+V GQ ++ D + +++ D+ + +K G L GA+LG
Sbjct: 148 RCAGSMGMVGGQVVDM-----DSEGKEI----DLATLEYIHTRKTGALILASVQSGAVLG 198
Query: 246 GGSEKEIELLRRYGFYVGM 264
G S ++++ L RY G+
Sbjct: 199 GASSEQVDNLGRYAKAAGL 217
>gi|404475626|ref|YP_006707057.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
B2904]
gi|404437115|gb|AFR70309.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
B2904]
Length = 295
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 113/248 (45%), Gaps = 23/248 (9%)
Query: 43 KSYWTSVHEDIGAHLR---QAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGH 99
K Y + +DI + + + + + + +++ + A + P L ACEL G
Sbjct: 4 KEYMNTRLKDIDSEINNIFKTINISLENNFLDMLKYPLDAGGKRLRPILTCLACELFNGD 63
Query: 100 REQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFG 159
++AI+ A +L ++H S +H++LP D L + KPT + + +LV D +L
Sbjct: 64 YKKAIIPAVSLELIHTYSLVHDDLPAMDNDDL-RRGKPTTHVKYGEANAILVGDGLLTHS 122
Query: 160 LELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDV 219
E+L++ A N + +++ E++ A G G+V GQ+ +L + D D
Sbjct: 123 FEILSN----ANVNDKTLRKLLYEISYAAGVSGMVMGQFIDLYYEERD---------IDF 169
Query: 220 EMTYETYKKKEGRLHACGAACGAILGGGSEKE---IELLRRYGFYVGMIQGIVSRRLGPT 276
EM + KK G + GAI SEKE +E + +YG +G+ I L
Sbjct: 170 EMLKILHSKKTGAMIRGAVRVGAI---ASEKENINLENITKYGEAIGLAFQIQDDILDVI 226
Query: 277 EEIEELKK 284
+ E L K
Sbjct: 227 SDNETLGK 234
>gi|149179199|ref|ZP_01857766.1| Polyprenyl synthetase [Planctomyces maris DSM 8797]
gi|148841972|gb|EDL56368.1| Polyprenyl synthetase [Planctomyces maris DSM 8797]
Length = 298
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 109/244 (44%), Gaps = 15/244 (6%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKE--PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHR 100
K W+++ + L +A+ P + M + + A + P L + +CE GG +
Sbjct: 9 KEMWSNLQTLVNRQLEEALDQSGDCPPILKAAMSYSLSAGGKRLRPILVLLSCEACGGDQ 68
Query: 101 EQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGL 160
A+ AA A+ ++H S IH++LP D L + PT + F +L DA+L
Sbjct: 69 STALPAACAIEMVHTYSLIHDDLPAMDDDEL-RRGLPTSHIKFGEANAILAGDALLTRAF 127
Query: 161 ELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVE 220
ELLA+ + V++ A G+ G+V GQ +L+ ++ +E
Sbjct: 128 ELLANQIEVKSCAAA----CCVDLANAAGAVGMVGGQVADLESEHLEN--------PTLE 175
Query: 221 MTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
+ +K+K GRL GA +GG ++ L RYG +G+ I L T + E
Sbjct: 176 ILEAIHKRKTGRLICSALTMGARIGGADPATLKNLERYGTCIGLAFQITDDLLDLTGDEE 235
Query: 281 ELKK 284
++ K
Sbjct: 236 KMGK 239
>gi|116620237|ref|YP_822393.1| farnesyl-diphosphate synthase [Candidatus Solibacter usitatus
Ellin6076]
gi|116223399|gb|ABJ82108.1| farnesyl-diphosphate synthase [Candidatus Solibacter usitatus
Ellin6076]
Length = 298
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 97/224 (43%), Gaps = 15/224 (6%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++ MR+ +FA + P LC+ A V AA +L ++H S IH++LP
Sbjct: 34 PETIHRAMRYSLFAGGKRIRPILCIEAARTVSDDCAGVAAAACSLELIHTYSLIHDDLPA 93
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D + K T + F +L D++L ++LA D P R R++ E+
Sbjct: 94 LDNDD-YRRGKLTNHKVFGDAMAILAGDSLLTLAFQVLAQLDAP----DARKTRLIAELA 148
Query: 186 RAMGS-QGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAIL 244
A G+ G++ GQ +L+ D ++ ++ K G L GAI
Sbjct: 149 TASGTVGGMIGGQVADLEGE---------GKPPDAQLLETIHRAKTGALLRASLRLGAIF 199
Query: 245 GGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
G +E + E L YG +VG+ IV L E E L K A K
Sbjct: 200 AGAAEPQYEALSCYGQHVGLAFQIVDDILDVEESSEALGKTAGK 243
>gi|431806893|ref|YP_007233791.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
P43/6/78]
gi|430780252|gb|AGA65536.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
P43/6/78]
Length = 295
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 96/204 (47%), Gaps = 20/204 (9%)
Query: 84 MAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAF 143
+ P L ACEL G ++AI+ A +L ++H S +H++LP D L + KPT + +
Sbjct: 48 LRPILTCLACELFNGDYKKAIIPAVSLELIHTYSLVHDDLPAMDNDDL-RRGKPTTHVKY 106
Query: 144 KPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQC 203
+LV D +L E+L++ A N + +++ E++ A G G+V GQ+ +L
Sbjct: 107 GEANAILVGDGLLTHSFEILSN----ANVNDKTLRKLLYEISYAAGVSGMVMGQFIDLYY 162
Query: 204 SQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKE---IELLRRYGF 260
+ D D EM + KK G + GAI SEKE +E + +YG
Sbjct: 163 EERD---------IDFEMLKILHSKKTGAMIRGAVRVGAI---ASEKENINLENITKYGE 210
Query: 261 YVGMIQGIVSRRLGPTEEIEELKK 284
+G+ I L + E L K
Sbjct: 211 AIGLAFQIQDDILDVISDNETLGK 234
>gi|300870060|ref|YP_003784931.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
95/1000]
gi|300687759|gb|ADK30430.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
95/1000]
Length = 295
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 90/184 (48%), Gaps = 20/184 (10%)
Query: 84 MAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAF 143
+ P L ACEL G ++AI+ A +L ++H S +H++LP D L + KPT + +
Sbjct: 48 LRPILTCLACELFNGDYKKAIIPAVSLELIHTYSLVHDDLPAMDNDDL-RRGKPTTHVKY 106
Query: 144 KPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQC 203
+LV D +L E+L++ A N + +++ E++ A G G+V GQ+ +L
Sbjct: 107 GEANAILVGDGLLTHSFEILSN----ANVNDKTLRKLLYEISYAAGVSGMVMGQFIDLYY 162
Query: 204 SQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKE---IELLRRYGF 260
+ D D EM + KK G + GAI SEKE +E + +YG
Sbjct: 163 EERD---------IDFEMLKILHSKKTGAMIRGAVRVGAI---ASEKENINLENITKYGE 210
Query: 261 YVGM 264
+G+
Sbjct: 211 AIGL 214
>gi|291613174|ref|YP_003523331.1| polyprenyl synthetase [Sideroxydans lithotrophicus ES-1]
gi|291583286|gb|ADE10944.1| Polyprenyl synthetase [Sideroxydans lithotrophicus ES-1]
Length = 295
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 120/254 (47%), Gaps = 25/254 (9%)
Query: 46 WTSVHED-----IGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHR 100
W S+H+ +G L Q V+ P ++ MR+ V + P L AA EL G
Sbjct: 7 WVSIHQSRFEDAVGRLLPQTDVL--PQRLHAAMRYSVLEGGKRVRPLLAYAAGELAGAPI 64
Query: 101 EQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGL 160
E+ +AAAA+ ++HA S +H+++P D ++ + KPT + + T LLV DA+
Sbjct: 65 ERVEIAAAAVELIHAYSLVHDDMPCMD-DDVLRRGKPTCHIEYDEATALLVGDALQSLAF 123
Query: 161 ELLAS---SDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGIT 217
+LL+ SD+P+ R L+++ + A GS+G+ GQ +L K +
Sbjct: 124 QLLSEHRLSDDPS-----RQLQMVRLLAAASGSRGMAGGQAIDLASVG------KQLAMP 172
Query: 218 DVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTE 277
++E + + K G L GA G + +++ L RYG +G+ +V L
Sbjct: 173 ELE---QMHIYKTGALIRAAILLGAHCGKLDQAQLDKLDRYGKCIGLAFQVVDDVLDSEA 229
Query: 278 EIEELKKLAFKLRE 291
+ L K A K ++
Sbjct: 230 DTATLGKTAGKDKD 243
>gi|114769861|ref|ZP_01447471.1| geranylgeranyl pyrophosphate synthetase [Rhodobacterales bacterium
HTCC2255]
gi|114549566|gb|EAU52448.1| geranylgeranyl pyrophosphate synthetase [alpha proteobacterium
HTCC2255]
Length = 291
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 96/193 (49%), Gaps = 14/193 (7%)
Query: 72 PMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSL 131
P+RH V + L + +C + ++ AI AA A+ +HA S +H++LP D L
Sbjct: 34 PIRHAVLNGGKRLRAFLVIHSCNIFEVQKDTAIQAAIAIECLHAYSLVHDDLPCMDDDEL 93
Query: 132 IPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQ 191
+ KPT++ + T L DA+ EL+AS N ++ RI+ ++ ++ +A G Q
Sbjct: 94 -RRGKPTVHVKWDEATATLTGDALQALAFELIASLPNT---DAIRIVELLKKLAKASGMQ 149
Query: 192 GVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKE 251
G+V GQ ++Q + + + +N IT ++ + K G L A GAIL +++
Sbjct: 150 GMVLGQAQDIQAEKS-EVNLNINDITSLQ------QNKTGALIEWSAISGAILSNHDDRK 202
Query: 252 IELLRRYGFYVGM 264
L Y +G+
Sbjct: 203 ---LLDYAKSIGL 212
>gi|158521674|ref|YP_001529544.1| polyprenyl synthetase [Desulfococcus oleovorans Hxd3]
gi|158510500|gb|ABW67467.1| Polyprenyl synthetase [Desulfococcus oleovorans Hxd3]
Length = 295
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 11/196 (5%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
++ MRH + A + P LC+AA E VGG E A+ A+ ++H S +H++LP D
Sbjct: 32 LFSAMRHSLKAGGKRLRPILCMAAAEAVGGTWEDALFPGCAIELIHTYSLVHDDLPAIDN 91
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
L + +P + AF T + DA+ E+L SSD R L ++ ++RA
Sbjct: 92 DPL-RRGQPACHAAFDEATAIFAGDALHTLAFEVL-SSDRYIFFQGKRRLALIHLISRAT 149
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
G+ G++EGQ ++ G ++ E ++ K G L GA+ G +
Sbjct: 150 GNHGMIEGQMRDILAQ---------GGNLGLDQLKELHRLKTGALITASVHAGALTGKAT 200
Query: 249 EKEIELLRRYGFYVGM 264
++ L Y +G+
Sbjct: 201 VRQTGKLIEYAENIGL 216
>gi|296122688|ref|YP_003630466.1| polyprenyl synthetase [Planctomyces limnophilus DSM 3776]
gi|296015028|gb|ADG68267.1| Polyprenyl synthetase [Planctomyces limnophilus DSM 3776]
Length = 318
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 101/219 (46%), Gaps = 13/219 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++E MR+ + P L + A E G QA+ AA AL ++H S IH++LP
Sbjct: 54 PPSLFESMRYSALGGGKRLRPVLVLLASEACGADPLQAMPAAVALEMIHCYSLIHDDLPA 113
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D L + +PT + + T +L D +L E+LA+ +N L + ++
Sbjct: 114 MDDDDL-RRGRPTNHIVYGEATAILAGDGLLTRAFEVLATEI----SNKELALACVADLA 168
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
A G G+V GQ +L + +T + + + +K GRL AC G LG
Sbjct: 169 SAAGWCGMVGGQAADLAA--------ETTPVTTLAELEQIHHRKTGRLLACALTMGGRLG 220
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
G S +++E L RYGF +G+ I L E+L K
Sbjct: 221 GASVQQLESLARYGFAIGLAFQIADDLLDVEGSSEKLGK 259
>gi|424836170|ref|ZP_18260827.1| geranyltranstransferase [Clostridium sporogenes PA 3679]
gi|365977572|gb|EHN13671.1| geranyltranstransferase [Clostridium sporogenes PA 3679]
Length = 290
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 13/197 (6%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
E+YE M + + A + P L + L +QAI AAA+ ++H S IH++LP D
Sbjct: 28 EIYESMAYSLEAGGKRIRPILFLNTYSLYKEDYKQAIPIAAAIEMIHTYSLIHDDLPAMD 87
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
L + KPT + F +L DA+L + ++ G N+ L+ + +A
Sbjct: 88 NDDL-RRGKPTNHKIFGEAIAILAGDALLNEAMNIMFDYSLKNGENA---LKACYTIAKA 143
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G G++ GQ ++ +D+ ++ ++ Y +KKK G L GAILG
Sbjct: 144 AGVDGMIGGQVVDILS-----EDKSIS----LDELYYMHKKKTGALIKASILAGAILGSA 194
Query: 248 SEKEIELLRRYGFYVGM 264
+ +IELL YG +G+
Sbjct: 195 TSTDIELLGEYGDNLGL 211
>gi|365134906|ref|ZP_09343465.1| hypothetical protein HMPREF1032_01261 [Subdoligranulum sp.
4_3_54A2FAA]
gi|363613233|gb|EHL64751.1| hypothetical protein HMPREF1032_01261 [Subdoligranulum sp.
4_3_54A2FAA]
Length = 293
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 14/220 (6%)
Query: 65 EPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLP 124
E V E R+ +F + LC+A C+++ G+R A AA + ++H S IH++LP
Sbjct: 28 ERSRVCEAARYSLFGGGKRVRAVLCLAVCDMLDGNRNAAACYAAGVEMLHCYSLIHDDLP 87
Query: 125 LSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEM 184
D + + +P+ + AF T LL D +L E L+ S A N+ + +
Sbjct: 88 CMDNDDM-RRGRPSCHKAFGEATALLAGDTLLTAAFETLSGSPGTAVQNTAAV----CAL 142
Query: 185 TRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAIL 244
+RA G+ G+V GQ +L + E E ++ K G L A GA+
Sbjct: 143 SRAAGANGMVWGQELDLTFEE---------KPATAEELREVHRNKTGMLINAAAQLGAVA 193
Query: 245 GGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
+ + + + RY F VG++ I+ L T ++L K
Sbjct: 194 ASADDIQRQAIARYAFSVGLVFQIIDDILDVTATAQQLGK 233
>gi|341821174|emb|CCC57514.1| geranyltranstransferase [Weissella thailandensis fsh4-2]
Length = 290
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 11/194 (5%)
Query: 71 EPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTS 130
E M + V A + P L +A G + + AA+AL ++H S IH++LP D
Sbjct: 33 EAMLYAVLAGGKRLRPMLSLAVLHTYGQPVDNYLKAASALELVHTYSLIHDDLPAMDDDE 92
Query: 131 LIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGS 190
L + KPT + AF + +L DA+ P E L ++D P N+S R+ +++ + + G
Sbjct: 93 L-RRGKPTTHRAFGEDMAILAGDALQPLAFEWLTAADQPL-NDSQRV-QLVATLAKDSGG 149
Query: 191 QGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEK 250
G+V GQ +++ Q + T + K G L A GAI+ ++
Sbjct: 150 AGMVAGQVLDIEAMQ--------KAAVTLSETQAIHYHKTGALIAYALQAGAIMANADKE 201
Query: 251 EIELLRRYGFYVGM 264
++LR +G G+
Sbjct: 202 VQKILRDFGMAYGL 215
>gi|394988076|ref|ZP_10380914.1| hypothetical protein SCD_00477 [Sulfuricella denitrificans skB26]
gi|393792534|dbj|GAB70553.1| hypothetical protein SCD_00477 [Sulfuricella denitrificans skB26]
Length = 296
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 104/229 (45%), Gaps = 13/229 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P +++ MR+ V + P L AA E+VG + AAAA+ ++HA S +H++LP
Sbjct: 30 PQRLHQAMRYVVLGGGKRIRPLLAFAAGEVVGAGPQCVDAAAAAVELIHAYSLVHDDLPC 89
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D SL + KPT +H + T LLV D++ ++LA D P + L +M +
Sbjct: 90 MDDDSL-RRGKPTCHHEYDEATALLVGDSLQTLAFQVLA--DRPLADAPAVQLEMMKILA 146
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
A GS+G+ G Q D + ++ E+ + + K G L GA+ G
Sbjct: 147 VAAGSRGMAGG--------QAIDGESVGKTLSLPELEF-MHIHKTGALIRASVQLGALCG 197
Query: 246 GGSE-KEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVN 293
G E E+E L Y +G+ +V L L K A K E N
Sbjct: 198 KGLENSEMEHLLHYAKCIGLAFQVVDDVLDAESNTATLGKTAGKDAEAN 246
>gi|337288952|ref|YP_004628424.1| Farnesyltranstransferase [Thermodesulfobacterium sp. OPB45]
gi|334902690|gb|AEH23496.1| Farnesyltranstransferase [Thermodesulfobacterium geofontis OPF15]
Length = 301
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 99/214 (46%), Gaps = 10/214 (4%)
Query: 74 RHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIP 133
++ +FA + P LC+A+CE+VGG + ++ AA + +H S IH++LP D
Sbjct: 42 KYSLFAGGKRIRPILCLASCEVVGGDWRKILLFAAGIECIHTYSLIHDDLPCMDDDDF-R 100
Query: 134 KSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGV 193
+ KP+ + AF T +L D + + D ++L+ + +++A+G +G+
Sbjct: 101 RGKPSCHKAFDEATAILAGDGLQALAFQFFTHPDLVRNVKKTKLLKAIYIISKAIGFEGM 160
Query: 194 VEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIE 253
V GQ +L + R L I + K RL GAILGG KE++
Sbjct: 161 VGGQMVDLLMEGKKGNPRILKWI---------HLNKTVRLIEASVLSGAILGGAKAKELK 211
Query: 254 LLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAF 287
L YG +G IV L + ++L K F
Sbjct: 212 ALSSYGKNLGFAFQIVDDLLDILGDEKKLGKKTF 245
>gi|406878658|gb|EKD27503.1| hypothetical protein ACD_79C00693G0001, partial [uncultured
bacterium]
Length = 246
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 13/178 (7%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
P LC+ + EL + I A AL ++H + IH++LP D + KPT + AF
Sbjct: 2 PILCLLSAELFAEPSQNVINCACALELLHTYTLIHDDLPCMDNDDF-RRGKPTCHKAFPE 60
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
+ LL DA+L +++A + RI+ + E+T GS+GV+ GQ ++
Sbjct: 61 SIALLAGDALLTLCFQIIADNTKNCPEKGIRIISDLAELT---GSKGVIGGQVLDII--- 114
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVG 263
+ IT E++ E + K +L + GAIL +E E+E++ +YG +G
Sbjct: 115 -----NENKPITPEELS-EIHINKTAKLISASVRMGAILMNAAESELEMITKYGLLIG 166
>gi|338740899|ref|YP_004677861.1| geranyltranstransferase [Hyphomicrobium sp. MC1]
gi|337761462|emb|CCB67295.1| geranyltranstransferase (farnesyl-diphosphate synthase)
[Hyphomicrobium sp. MC1]
Length = 301
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 14/215 (6%)
Query: 55 AHLRQAVVVKE----PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAAL 110
A+L A+ +E P + E +RH V P L + L G +E A+ AA A+
Sbjct: 17 AYLTAALARQESEGTPARLAEAIRHAVLGGGKRFRPFLVFHSAALFGATKEAALPAAGAI 76
Query: 111 HVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPA 170
+H S +H++LP D L + +PT++ A+ T +LV DA+ F EL+ P
Sbjct: 77 ECIHCYSLVHDDLPSMDNDEL-RRGRPTVWKAYDDWTAILVGDALQAFAFELVG---RPE 132
Query: 171 GNNSGRILRVMVE-MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKK 229
N++ I +V + A G+ G+V GQ +L+ + + +E K
Sbjct: 133 SNSNPSIRADLVHILAVASGAIGMVGGQQLDLEAGKLSNQP-----TPTIESIMRLQAMK 187
Query: 230 EGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
G L GA++GG +E L+ YG ++G+
Sbjct: 188 TGALITAACEMGAVVGGAKPEERAALKTYGEHLGV 222
>gi|338812850|ref|ZP_08625003.1| geranylgeranyl pyrophosphate synthase [Acetonema longum DSM 6540]
gi|337275149|gb|EGO63633.1| geranylgeranyl pyrophosphate synthase [Acetonema longum DSM 6540]
Length = 295
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 102/219 (46%), Gaps = 13/219 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P + E MR+ VFA M P L +AA + V G E+ AA L ++H S IH++LP
Sbjct: 31 PPVILEAMRYSVFAGGKRMRPVLLMAAADAVNGRGEEYTHVAAGLEMIHTYSLIHDDLPA 90
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
+ KPT + + +L DA+L + E++ + S +LRV+ E+
Sbjct: 91 M-DDDDYRRGKPTNHKVYGEAMAILAGDALLTYAFEVMGRQPDVL---SDVLLRVIAEIA 146
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
A+G G+V GQ +L + K G+ ++E +K K G L GA+L
Sbjct: 147 AAVGPLGMVGGQAMDLFS------EGKQIGLQEIEY---LHKAKTGALFKASIRAGAMLA 197
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
G E++++ L +Y Y G+ I L T EL K
Sbjct: 198 GAGEEQLQDLTQYSDYFGLAFQITDDILDVTGNQAELGK 236
>gi|255655210|ref|ZP_05400619.1| geranyltranstransferase [Clostridium difficile QCD-23m63]
gi|296451195|ref|ZP_06892936.1| Farnesyltranstransferase [Clostridium difficile NAP08]
gi|296880453|ref|ZP_06904415.1| Farnesyltranstransferase [Clostridium difficile NAP07]
gi|296260016|gb|EFH06870.1| Farnesyltranstransferase [Clostridium difficile NAP08]
gi|296428407|gb|EFH14292.1| Farnesyltranstransferase [Clostridium difficile NAP07]
Length = 295
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 13/206 (6%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
V E M + + A + P L + AC++VGG+ ++AI A A+ ++H S IH++LP D
Sbjct: 32 VIEAMNYSLSAGGKRLRPILTLEACKIVGGNEDEAIPFAIAIEMIHTYSLIHDDLPALDN 91
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE-LLASSDNPAGNNSGRILRVMVEMTRA 187
L + +PT + + +L DA+L + E +LA S N N + L+ + E+ +
Sbjct: 92 DDL-RRGRPTNHKVYGEAMGILAGDALLNYAFEVMLAGSINK--ENPEKYLKAINEIAKG 148
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G G++ GQ +++ + KL+ Y K + C A GA +GG
Sbjct: 149 AGIYGMIGGQVVDVESENKQIEKEKLD--------YIHMNKTAAMMVGCMRA-GATIGGA 199
Query: 248 SEKEIELLRRYGFYVGMIQGIVSRRL 273
+ +++E + +Y +G+ IV L
Sbjct: 200 NSEQMEEITKYAKNIGLSFQIVDDIL 225
>gi|94970459|ref|YP_592507.1| farnesyl-diphosphate synthase [Candidatus Koribacter versatilis
Ellin345]
gi|94552509|gb|ABF42433.1| farnesyl-diphosphate synthase [Candidatus Koribacter versatilis
Ellin345]
Length = 315
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 16/228 (7%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVA-AAALHVMHAASFIHE 121
+ P +++ MRH VFA + P L + A ++ G + AAL ++H S IH+
Sbjct: 47 TQRPPSIHQAMRHSVFAGGKRLRPILVMEAARMITGSLPDGVDELGAALEMLHTYSLIHD 106
Query: 122 NLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVM 181
+LP D L + +PT + AF T +L DA+ + E++A A R+ +++
Sbjct: 107 DLPALDNDDL-RRGRPTCHVAFGEATAILAGDALQTYAYEVMARLRTTA---EARV-QII 161
Query: 182 VEMTRAMGS-QGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAAC 240
E+ A G+ G++ GQ +L+ D + I ++ K G L
Sbjct: 162 EEVAHATGTIDGMIGGQVLDLEAEHTHADAATVEYI---------HRSKTGALITASVVA 212
Query: 241 GAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
G + G + +++ +R +G G+ IV L T+ E+L K A K
Sbjct: 213 GGLYAGADKAQVQRIREFGKSAGLAFQIVDDVLDVTQTSEQLGKTAGK 260
>gi|423090783|ref|ZP_17079069.1| putative geranyltranstransferase [Clostridium difficile
70-100-2010]
gi|357555898|gb|EHJ37520.1| putative geranyltranstransferase [Clostridium difficile
70-100-2010]
Length = 295
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 13/206 (6%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
V E M + + A + P L + AC++VGG+ ++AI A A+ ++H S IH++LP D
Sbjct: 32 VIEAMNYSLSAGGKRLRPILTLEACKIVGGNEDEAIPFAIAIEMIHTYSLIHDDLPALDN 91
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE-LLASSDNPAGNNSGRILRVMVEMTRA 187
L + +PT + + +L DA+L + E +LA S N N + L+ + E+ +
Sbjct: 92 DDL-RRGRPTNHKVYGEAMGILAGDALLNYAFEVMLAGSINK--ENPEKYLKAINEIAKG 148
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G G++ GQ +++ + KL+ Y K + C A GA +GG
Sbjct: 149 AGIYGMIGGQVVDVESENKQIEKEKLD--------YIHMNKTAAMMVGCMIA-GATIGGA 199
Query: 248 SEKEIELLRRYGFYVGMIQGIVSRRL 273
+ +++E + +Y +G+ IV L
Sbjct: 200 NSEQMEEITKYAKNIGLSFQIVDDIL 225
>gi|126698801|ref|YP_001087698.1| geranyltranstransferase [Clostridium difficile 630]
gi|254974740|ref|ZP_05271212.1| geranyltranstransferase [Clostridium difficile QCD-66c26]
gi|255092129|ref|ZP_05321607.1| geranyltranstransferase [Clostridium difficile CIP 107932]
gi|255100220|ref|ZP_05329197.1| geranyltranstransferase [Clostridium difficile QCD-63q42]
gi|255306109|ref|ZP_05350281.1| geranyltranstransferase [Clostridium difficile ATCC 43255]
gi|255313866|ref|ZP_05355449.1| geranyltranstransferase [Clostridium difficile QCD-76w55]
gi|255516547|ref|ZP_05384223.1| geranyltranstransferase [Clostridium difficile QCD-97b34]
gi|255649647|ref|ZP_05396549.1| geranyltranstransferase [Clostridium difficile QCD-37x79]
gi|260682811|ref|YP_003214096.1| geranyltranstransferase [Clostridium difficile CD196]
gi|260686409|ref|YP_003217542.1| geranyltranstransferase [Clostridium difficile R20291]
gi|306519764|ref|ZP_07406111.1| geranyltranstransferase [Clostridium difficile QCD-32g58]
gi|384360393|ref|YP_006198245.1| geranyltranstransferase [Clostridium difficile BI1]
gi|115250238|emb|CAJ68059.1| Geranyltranstransferase [Clostridium difficile 630]
gi|260208974|emb|CBA62025.1| geranyltranstransferase [Clostridium difficile CD196]
gi|260212425|emb|CBE03292.1| geranyltranstransferase [Clostridium difficile R20291]
Length = 295
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 13/206 (6%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
V E M + + A + P L + AC++VGG+ ++AI A A+ ++H S IH++LP D
Sbjct: 32 VIEAMNYSLSAGGKRLRPILTLEACKIVGGNEDEAIPFAIAIEMIHTYSLIHDDLPALDN 91
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE-LLASSDNPAGNNSGRILRVMVEMTRA 187
L + +PT + + +L DA+L + E +LA S N N + L+ + E+ +
Sbjct: 92 DDL-RRGRPTNHKVYGEAMGILAGDALLNYAFEVMLAGSINK--ENPEKYLKAINEIAKG 148
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G G++ GQ +++ + KL+ Y K + C A GA +GG
Sbjct: 149 AGIYGMIGGQVVDVESENKQIEKEKLD--------YIHMNKTAAMMVGCMRA-GATIGGA 199
Query: 248 SEKEIELLRRYGFYVGMIQGIVSRRL 273
+ +++E + +Y +G+ IV L
Sbjct: 200 NSEQMEEITKYAKNIGLSFQIVDDIL 225
>gi|383757523|ref|YP_005436508.1| geranyltranstransferase [Rubrivivax gelatinosus IL144]
gi|381378192|dbj|BAL95009.1| geranyltranstransferase [Rubrivivax gelatinosus IL144]
Length = 296
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 110/253 (43%), Gaps = 14/253 (5%)
Query: 42 NKSYWTSVHED-IGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHR 100
N +W D + A L V P + E MR+ V + P L +AACE +GG R
Sbjct: 6 NFDHWARHQLDAVEAALETWVPEDAPAGLGEAMRYGVLDGGKRLRPLLVLAACEALGGSR 65
Query: 101 EQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGL 160
E A+ +AAA+ ++HA S +H+++P D ++ + KPT++ + +L DAM
Sbjct: 66 EAALRSAAAVELIHAYSLVHDDMPCMD-NDVLRRGKPTVHVKYGEAQAMLAGDAMQALAF 124
Query: 161 ELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVE 220
E+L + R++R++ Q + R L+ T E
Sbjct: 125 EILTPDEGVEPVLQARLVRLLARAAGHA--------GMAGGQAIDLANTGRMLDEATLRE 176
Query: 221 MTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
M ++KK G L GA G + + L YG +G+ +V L T+ +
Sbjct: 177 M----HRKKTGALLLASVQMGAACGSPTPATWQALSVYGEAIGLAFQVVDDILDCTQASD 232
Query: 281 ELKKLAFKLREVN 293
+L K A K +E N
Sbjct: 233 KLGKTAGKDQEAN 245
>gi|302522954|ref|ZP_07275296.1| polyprenyl diphosphate synthase [Streptomyces sp. SPB78]
gi|302431849|gb|EFL03665.1| polyprenyl diphosphate synthase [Streptomyces sp. SPB78]
Length = 377
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 89/202 (44%), Gaps = 19/202 (9%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
PAL + + E+ G E + A A+ ++H S +H++L D + + T++ P
Sbjct: 87 PALALISAEVTGASAETGVPGAVAVELVHNFSLLHDDLMDGDEQR---RHRDTVWKVHGP 143
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
+LV DA+ E+L P +GR R + TRA+ ++GQ ++
Sbjct: 144 AQAILVGDALFALANEILLELGTP---EAGRATRRLTRATRAL-----IDGQAQDISYEH 195
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
D VE E K G L AC A+ GA+LGG E + L RYG+++G+
Sbjct: 196 RDR--------VTVEECLEMEGNKTGALLACAASIGAVLGGADEATADTLERYGYHLGLA 247
Query: 266 QGIVSRRLGPTEEIEELKKLAF 287
V LG + E K +
Sbjct: 248 FQAVDDLLGIWGDPESTGKQTW 269
>gi|108804293|ref|YP_644230.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
gi|108765536|gb|ABG04418.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
Length = 299
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 99/226 (43%), Gaps = 13/226 (5%)
Query: 63 VKEPV--EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIH 120
+EP + E MR+ + A + P LC+ + L G E+ + +AAA+ ++H S IH
Sbjct: 27 TEEPALERLQEAMRYSLLAGGKRVRPLLCMESARLFGAPPERVLPSAAAIELIHTYSLIH 86
Query: 121 ENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRV 180
++LP D + +PT + F +L DA FG L + G R L V
Sbjct: 87 DDLPAMDNDDF-RRGRPTSHKKFGEAMAILAGDAF--FGEALTLITVRQEGTCEQR-LGV 142
Query: 181 MVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAAC 240
+ E+ + G G+V GQ D D G D M + ++ K G L A
Sbjct: 143 VQELASSTGVNGMVGGQV-------LDMDQTGAGGSADPGMLFMIHRYKTGALIRSSARV 195
Query: 241 GAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLA 286
GAIL G E+ +E + RY +G+ IV L E L K A
Sbjct: 196 GAILAGAGEEGLEAISRYATELGLCFQIVDDVLDAVGSSERLGKRA 241
>gi|318058274|ref|ZP_07976997.1| polyprenyl diphosphate synthase [Streptomyces sp. SA3_actG]
gi|318076936|ref|ZP_07984268.1| polyprenyl diphosphate synthase [Streptomyces sp. SA3_actF]
Length = 386
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 89/202 (44%), Gaps = 19/202 (9%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
PAL + + E+ G E + A A+ ++H S +H++L D + + T++ P
Sbjct: 96 PALALISAEVTGASAETGVPGAVAVELVHNFSLLHDDLMDGDEQR---RHRDTVWKVHGP 152
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
+LV DA+ E+L P +GR R + TRA+ ++GQ ++
Sbjct: 153 AQAILVGDALFALANEILLELGTP---EAGRATRRLTRATRAL-----IDGQAQDISYEH 204
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
D VE E K G L AC A+ GA+LGG E + L RYG+++G+
Sbjct: 205 RDR--------VTVEECLEMEGNKTGALLACAASIGAVLGGADEATADTLERYGYHLGLA 256
Query: 266 QGIVSRRLGPTEEIEELKKLAF 287
V LG + E K +
Sbjct: 257 FQAVDDLLGIWGDPESTGKQTW 278
>gi|406871183|gb|EKD22087.1| hypothetical protein ACD_87C00167G0001 [uncultured bacterium]
Length = 302
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 87/199 (43%), Gaps = 10/199 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P +++ +R+ + A + P LC+AA E VGG + + A AL +H S IH++LP
Sbjct: 35 PPVIFQAVRYSLLAGGKRLRPILCLAAAEAVGGDSKTILPVACALEYIHTYSLIHDDLPA 94
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D + + T + F + +L DA+L LL + G IL V E+
Sbjct: 95 MDNDD-YRRGRLTAHKVFGEDIAILAGDALLTEAFHLLTRKELMPGIPPEYILTVTAEIA 153
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
A G G+V GQ D R D+E + ++ K G L GAIL
Sbjct: 154 AAAGWFGMVGGQVL---------DVRSEGKKVDLETLQQIHRLKTGELIRVSLRSGAILS 204
Query: 246 GGSEKEIELLRRYGFYVGM 264
G S + L YG +G+
Sbjct: 205 GASTEMTASLSDYGRQIGL 223
>gi|117924356|ref|YP_864973.1| farnesyl-diphosphate synthase [Magnetococcus marinus MC-1]
gi|117608112|gb|ABK43567.1| farnesyl-diphosphate synthase [Magnetococcus marinus MC-1]
Length = 294
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 101/221 (45%), Gaps = 12/221 (5%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
+EP + MR+ + + P L +A CE VGG E+A+ A A+ +H S IH++L
Sbjct: 27 REPRALTGAMRYSLLIGGKRLRPILTLACCEAVGGALERAMNFACAMECVHTYSLIHDDL 86
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE 183
P D L + PT + + T +L DA+L EL A G L ++ E
Sbjct: 87 PAMDNDDL-RRGHPTCHRQYGEATAILAGDALLTHAFELAAKPVT--GVLPEARLELIGE 143
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAI 243
+ A G+ G+V GQ ++Q + + +L I + K G L GA
Sbjct: 144 LAMAAGTYGMVGGQMLDIQGEKRPLELVQLQNI---------HIHKTGALIRVACLAGAR 194
Query: 244 LGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
LGGG+ +++ L+RYG +G+ I L + + L K
Sbjct: 195 LGGGTPDQVKHLKRYGEALGLAFQITDDILDEVGDTKTLGK 235
>gi|392531890|ref|ZP_10279027.1| geranyltranstransferase [Carnobacterium maltaromaticum ATCC 35586]
Length = 293
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 111/214 (51%), Gaps = 17/214 (7%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
++E M + V A + P L +A + +GG+ + ++AA+AL +H S IH++LP D
Sbjct: 32 LFEAMTYSVKAGGKRIRPLLLLATIQSLGGNIKSGLLAASALEYIHTYSLIHDDLPAMDD 91
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
+L + +PT + + +L D +L G ELLA S P + +R+++ +++A
Sbjct: 92 DAL-RRGQPTNHIIYGEALAILAGDGLLTLGFELLAKS--PLTEK--QKVRLILALSKAA 146
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
G+ G+V G Q S + + +KL +TD++ +KKK G L A GA++
Sbjct: 147 GANGMVVG-----QVSDMEGESQKLT-LTDLQ---NIHKKKTGELLKFAAYAGAVIVDAD 197
Query: 249 EKEIELLRRYGFYVGM---IQGIVSRRLGPTEEI 279
++ L ++ ++G+ I+ + +G T E+
Sbjct: 198 QETETQLVKFASHLGLAFQIRDDILDVIGTTAEL 231
>gi|87120692|ref|ZP_01076585.1| geranyltranstransferase [Marinomonas sp. MED121]
gi|86163920|gb|EAQ65192.1| geranyltranstransferase [Marinomonas sp. MED121]
Length = 293
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 110/253 (43%), Gaps = 15/253 (5%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPV-EVYEPMRHFVFAAPVNMAPALCVAACELVGGHRE 101
K + T + +L Q + P +++ MR+ +F + P L A+ +LVG
Sbjct: 4 KQFSTYTQSRVDQYLEQQLSDYAPANQLHNAMRYSLFNGGKRIRPMLTYASAQLVGDISS 63
Query: 102 QAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE 161
+AAAL +HA S IH++LP D L + KPT + F T +L DA+ F E
Sbjct: 64 LTDASAAALESIHAYSLIHDDLPAMDNDEL-RRGKPTCHIQFDEATAILAGDALQTFAFE 122
Query: 162 LLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEM 221
LL+ NP ++++ E+ A G G++ GQ +L + K + ++E
Sbjct: 123 LLS---NPTSAQPELAIKLIQELVVASGRNGMITGQMIDLSS------ENKNISLAELE- 172
Query: 222 TYETYKKKEGRLHACGAACGAILGGGSEKE-IELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
+ + K G L GA+ G + E + L Y +G+ + + T + E
Sbjct: 173 --QMHVHKTGALIKASVRMGALSTGQVKPEQLAKLDAYAHAIGLAFQVQDDIIDLTSDTE 230
Query: 281 ELKKLAFKLREVN 293
L K F E N
Sbjct: 231 TLGKTQFSDAEAN 243
>gi|414084354|ref|YP_006993062.1| farnesyl diphosphate synthase [Carnobacterium maltaromaticum LMA28]
gi|412997938|emb|CCO11747.1| farnesyl diphosphate synthase [Carnobacterium maltaromaticum LMA28]
Length = 293
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 111/214 (51%), Gaps = 17/214 (7%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
++E M + V A + P L +A + +GG+ + ++AA+AL +H S IH++LP D
Sbjct: 32 LFEAMTYSVKAGGKRIRPLLLLATIQSLGGNIKSGLLAASALEYIHTYSLIHDDLPAMDD 91
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
+L + +PT + + +L D +L G ELLA S P + +R+++ +++A
Sbjct: 92 DAL-RRGQPTNHIIYGEALAILAGDGLLTLGFELLAKS--PLTEK--QKVRLILALSKAA 146
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
G+ G+V G Q S + + +KL +TD++ +KKK G L A GA++
Sbjct: 147 GANGMVVG-----QVSDMEGESQKLT-LTDLQ---NIHKKKTGELLKFAAYAGAVIVDAD 197
Query: 249 EKEIELLRRYGFYVGM---IQGIVSRRLGPTEEI 279
++ L ++ ++G+ I+ + +G T E+
Sbjct: 198 QETETQLVKFASHLGLAFQIRDDILDVIGTTAEL 231
>gi|390981228|pdb|4F62|A Chain A, Crystal Structure Of A Putative Farnesyl-Diphosphate
Synthase From Marinomonas Sp. Med121 (Target Efi-501980)
gi|390981229|pdb|4F62|B Chain B, Crystal Structure Of A Putative Farnesyl-Diphosphate
Synthase From Marinomonas Sp. Med121 (Target Efi-501980)
Length = 317
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 110/253 (43%), Gaps = 15/253 (5%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPV-EVYEPMRHFVFAAPVNMAPALCVAACELVGGHRE 101
K + T + +L Q + P +++ MR+ +F + P L A+ +LVG
Sbjct: 6 KQFSTYTQSRVDQYLEQQLSDYAPANQLHNAMRYSLFNGGKRIRPMLTYASAQLVGDISS 65
Query: 102 QAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE 161
+AAAL +HA S IH++LP D L + KPT + F T +L DA+ F E
Sbjct: 66 LTDASAAALESIHAYSLIHDDLPAMDNDEL-RRGKPTCHIQFDEATAILAGDALQTFAFE 124
Query: 162 LLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEM 221
LL+ NP ++++ E+ A G G++ GQ +L + K + ++E
Sbjct: 125 LLS---NPTSAQPELAIKLIQELVVASGRNGMITGQMIDLSS------ENKNISLAELE- 174
Query: 222 TYETYKKKEGRLHACGAACGAILGGGSEKE-IELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
+ + K G L GA+ G + E + L Y +G+ + + T + E
Sbjct: 175 --QMHVHKTGALIKASVRMGALSTGQVKPEQLAKLDAYAHAIGLAFQVQDDIIDLTSDTE 232
Query: 281 ELKKLAFKLREVN 293
L K F E N
Sbjct: 233 TLGKTQFSDAEAN 245
>gi|312134820|ref|YP_004002158.1| polyprenyl synthetase [Caldicellulosiruptor owensensis OL]
gi|311774871|gb|ADQ04358.1| Polyprenyl synthetase [Caldicellulosiruptor owensensis OL]
Length = 299
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 106/227 (46%), Gaps = 13/227 (5%)
Query: 41 KNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHR 100
K + Y + + HL + + P +Y+ MR+ VFA + P LC+ + ++ +
Sbjct: 5 KLEEYINLSQKKVEKHLDGILKERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMFSEDK 64
Query: 101 E--QAIV-AAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLP 157
E Q I+ A+A+ ++H S IH++LP D ++ + KPT + F +L DA+L
Sbjct: 65 EIDQKILDIASAIELIHTYSLIHDDLPAMD-NDVLRRGKPTNHVMFGEAIAILAGDALLN 123
Query: 158 FGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGIT 217
E+ G +++ + A G +G++ GQ ++ S D I
Sbjct: 124 LAAEVCMDWILRYGCREN-LIKAAKYLFWASGVEGMIGGQVIDITNSGQD--------IK 174
Query: 218 DVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
+ E+ +E + KK RL CGA++ G ++ + L YG +G+
Sbjct: 175 NEELLFEMHLKKTSRLIQASCVCGALVAGAEDRVVFDLEEYGKNLGL 221
>gi|205374084|ref|ZP_03226884.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
coahuilensis m4-4]
Length = 294
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P + E M + V A + P L +A E G I AA AL ++H S IH++LP
Sbjct: 30 PTSLKESMIYSVSAGGKRIRPVLLLATIEAFGKSPALGIKAAVALEMVHTYSLIHDDLPS 89
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D L + KPT + F T +L DA+L + E++AS + ++R+
Sbjct: 90 MDDDDL-RRGKPTNHKVFGEATAILAGDALLTYSFEVIASMKDILPQTKIELVRL---FA 145
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
+A G +G+V GQ +++ +RK +T E+ Y ++ K G+L GAI+G
Sbjct: 146 KAAGPEGMVGGQVADMEG------ERKT--LTLEELEY-IHRNKTGKLLQYAVVAGAIIG 196
Query: 246 GGSEKEIELLRRYGFYVGM 264
G S++E+ L + Y ++G+
Sbjct: 197 GASKEEVRLYKEYAEHIGL 215
>gi|451948109|ref|YP_007468704.1| geranylgeranyl pyrophosphate synthase [Desulfocapsa sulfexigens DSM
10523]
gi|451907457|gb|AGF79051.1| geranylgeranyl pyrophosphate synthase [Desulfocapsa sulfexigens DSM
10523]
Length = 298
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 71 EPMRHFVFAAPVNMAPALCVAACELVGGHR--EQAIV-AAAALHVMHAASFIHENLPLSD 127
E MR+ + A + P LC+AA VGG+ +Q I+ A AL +H S IH++LP D
Sbjct: 34 EAMRYSLLAGGKRVRPILCIAAARAVGGNTIDDQNILPVACALECIHTYSLIHDDLPAMD 93
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNN--SGRILRVMVEMT 185
+L + K T + + +L D +L + +LL NP+ N S + L + +
Sbjct: 94 NDAL-RRGKATNHVLYGEAGAILAGDGLLTWAFDLLC---NPSHGNLDSEKKLAISHCIA 149
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
A GS G+V GQ ++ N E ++ K G L GAI
Sbjct: 150 HAAGSFGMVGGQALDIASE---------NTRFPFETLQTIHRSKTGALITASVVSGAIAA 200
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLA 286
G ++ E L++YG +G+ IV L T E+L K A
Sbjct: 201 GADREQSEALKQYGHQIGLAFQIVDDLLNATATTEQLGKAA 241
>gi|451941188|ref|YP_007461826.1| geranyltranstransferase [Bartonella australis Aust/NH1]
gi|451900575|gb|AGF75038.1| geranyltranstransferase [Bartonella australis Aust/NH1]
Length = 300
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 12/231 (5%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + + MRH + P L + L G EQ++ + AL +H S IH++
Sbjct: 32 ISRPGALIKAMRHGALNGGKRLRPFLVTQSAALFGIPAEQSLDVSVALECVHCYSLIHDD 91
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D +L + +PT++ AF T +L DA+L F E++A G + + ++
Sbjct: 92 LPAMDNDTL-RRGRPTVHKAFDEATAILAGDALLTFAFEIIAHKAYTLGPQTK--IDLIT 148
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+ +A G G+V GQ +L+ + D + +T + K AC A GA
Sbjct: 149 SLAQASGLGGMVGGQILDLEAEKKPQDYSAV-------ITLQRMKTAALISFACKA--GA 199
Query: 243 ILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVN 293
I+G SE + L +G Y+G+ I L T L K K + N
Sbjct: 200 IIGKASEVLTQQLATFGTYIGLAFQITDDLLDVTASSLTLGKTTGKDKTAN 250
>gi|434382488|ref|YP_006704271.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli WesB]
gi|404431137|emb|CCG57183.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli WesB]
Length = 295
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 20/204 (9%)
Query: 84 MAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAF 143
+ P L ACEL G ++AI+ A +L ++H S +H++LP D L + KPT + +
Sbjct: 48 LRPILTCLACELFNGDYKKAIIPAVSLELIHTYSLVHDDLPAMDNDDL-RRGKPTTHVKY 106
Query: 144 KPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQC 203
+LV D + E+L++ A N + +++ E++ A G G+V GQ+ +L
Sbjct: 107 GEANAILVGDGLFTHSFEILSN----ANVNDKTLRKLLYEISYAAGVSGMVMGQFIDLYY 162
Query: 204 SQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKE---IELLRRYGF 260
+ D D EM + KK G + GAI SEKE +E + +YG
Sbjct: 163 EERD---------IDFEMLKILHSKKTGAMIRGAVRVGAI---ASEKENINLENITKYGE 210
Query: 261 YVGMIQGIVSRRLGPTEEIEELKK 284
+G+ I L + E L K
Sbjct: 211 AIGLAFQIQDDILDVISDNETLGK 234
>gi|345861767|ref|ZP_08814019.1| geranyltranstransferase [Desulfosporosinus sp. OT]
gi|344325160|gb|EGW36686.1| geranyltranstransferase [Desulfosporosinus sp. OT]
Length = 277
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 94/194 (48%), Gaps = 13/194 (6%)
Query: 71 EPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTS 130
+ M + + + P L +A+ E VGG E + AA AL ++H S IH++LP D
Sbjct: 18 QSMYYSLIGGGKRIRPVLALASAEAVGGSSELILPAAVALELIHTYSLIHDDLPAMDNDD 77
Query: 131 LIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGS 190
+ + + + F +L DA+L + E LA D G S R LR++ E+ A G
Sbjct: 78 -YRRGRLSNHKVFGEAQAILAGDALLTYAFEFLA--DEGLG-QSERQLRIIREVAVAAGK 133
Query: 191 QGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEK 250
G+V GQ ++ + K + ++E E +K K G L A G IL GG+E+
Sbjct: 134 VGMVGGQVADVAG------EGKTLTLNEIE---EIHKAKTGALLTVSARLGGILAGGTEE 184
Query: 251 EIELLRRYGFYVGM 264
+++ L Y +G+
Sbjct: 185 QVKALTDYAQALGL 198
>gi|374639389|gb|AEZ55683.1| geranylgeranyl diphosphate synthase 3 [Salvia miltiorrhiza]
Length = 379
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 113/228 (49%), Gaps = 14/228 (6%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
++ P +++E MR+ + + + P +C+AAC LVGG A+ +A AL ++HA S IH++
Sbjct: 108 LRHPAKLHEAMRYSLLSGGKRVCPIVCLAACRLVGGEDAAAMPSACALEMIHAMSLIHDD 167
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D L + +P+ + F +L A++ E +A++ G + R LRV+
Sbjct: 168 LPCMDDDDL-RRGRPSNHKVFGEPAAVLAGYALIASAFEHIATATE--GVPAERTLRVIG 224
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDD--RKLNGITDVEMTYETYKKKEGRLHACGAAC 240
E+ R +G++GVV GQ +L+ DD KL I V T + G AC
Sbjct: 225 EVARLIGAEGVVAGQVVDLRSGGGGDDVGLEKLEYI-HVHKTAAAVEAAAVAGAVLGGAC 283
Query: 241 GAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
E+EI +R Y G++ +V L T+ EEL K A K
Sbjct: 284 --------EEEIGNVRIYARRAGLMFQVVDDVLDVTKSTEELGKTAGK 323
>gi|121604406|ref|YP_981735.1| polyprenyl synthetase [Polaromonas naphthalenivorans CJ2]
gi|120593375|gb|ABM36814.1| farnesyl-diphosphate synthase [Polaromonas naphthalenivorans CJ2]
Length = 327
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 14/224 (6%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P + + MR+ V + P L +AAC V G A+ A A+ ++HA S +H+++P
Sbjct: 61 PAGLCDAMRYAVLDGGKRLRPLLVMAACAAVNGDAATALRPACAIELIHAYSLVHDDMPC 120
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPA-GNNSGRILRVMVEM 184
D ++ + KPT++ + LL DA+ ELL D+ R+ R++ +
Sbjct: 121 MD-NDVLRRGKPTVHVQYGEAQALLAGDALQALAFELLTPGDDSVDAPTQARLCRLLAQ- 178
Query: 185 TRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAIL 244
A G QG+ GQ +L +T ++ +E ++ K G L GA
Sbjct: 179 --AAGYQGMAGGQAIDLASVGLP--------LTSAQL-HEMHRLKTGALLQASVMMGAAC 227
Query: 245 GGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
G S + LR YG +G+ +V L T + L K A K
Sbjct: 228 GAASPTALAALRDYGAAIGLAFQVVDDILDVTADAATLGKTAGK 271
>gi|125600856|gb|EAZ40432.1| hypothetical protein OsJ_24885 [Oryza sativa Japonica Group]
Length = 333
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 106/223 (47%), Gaps = 18/223 (8%)
Query: 73 MRHFVFAAPVNMAPALCVAA---CELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRT 129
MR+ + AA + PAL +AA C G R + AAAA ++H S +H++ P D
Sbjct: 1 MRYALLAAGNRVGPALSLAAFPRCS--GARRPWPLPAAAAFEMVHTLSLVHDDFPCMDDD 58
Query: 130 SLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDN-----PAGNNSGRILRVMVEM 184
+ KPT + + +L DA+L +A D+ A + R++R + E+
Sbjct: 59 DF-RRGKPTCHVVYGEPIAVLTGDALLSLSFHHMARFDSYPPDIDADKHPARVVRAIGEL 117
Query: 185 TRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAIL 244
R +GS+G+V GQ +L+ + + +E + K L GAIL
Sbjct: 118 ARCIGSEGLVAGQVVDLEMTGSTE-------TVPLERLEYIHLHKTAALLEASVVIGAIL 170
Query: 245 GGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAF 287
GGGS+++IE LR Y +G++ +V + + E L++L +
Sbjct: 171 GGGSDEQIESLRMYARSIGLLFQVVDLEMTGSTETVPLERLEY 213
>gi|395774237|ref|ZP_10454752.1| polyprenyl synthatase [Streptomyces acidiscabies 84-104]
Length = 342
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 19/189 (10%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
PAL V + E+ G + A A+ ++H S +H++L D + + T++ P
Sbjct: 57 PALAVLSAEVTGADPAVGVPGAVAVELVHNFSLLHDDLMDGDEQR---RHRDTVWKVHGP 113
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
+LV DA+ E+L P +GR R + TRA+ ++GQ ++
Sbjct: 114 AQAILVGDALFALAYEVLL---EPGTAGAGRAARRLTAATRAL-----IDGQAQDISYEH 165
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
D VE E K G L AC ++ GA+LGG EK+ + L +YG+++G+
Sbjct: 166 RDR--------VSVEECLEMEGNKTGALLACASSVGAVLGGAGEKDADTLEKYGYHLGLA 217
Query: 266 QGIVSRRLG 274
V LG
Sbjct: 218 FQAVDDLLG 226
>gi|354582557|ref|ZP_09001458.1| Polyprenyl synthetase [Paenibacillus lactis 154]
gi|353198849|gb|EHB64315.1| Polyprenyl synthetase [Paenibacillus lactis 154]
Length = 301
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 10/201 (4%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
K P ++ M + + A + P L +AACE GG RE A+ A A+ ++H S IH++L
Sbjct: 31 KVPETLHRSMTYSLMAGGKRLRPLLVIAACEAAGGSREAALPVACAVEMVHTYSLIHDDL 90
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE 183
P D + KPT + F +L DA+L + S G + R+L ++ +
Sbjct: 91 PAMDDDDF-RRGKPTNHKVFGEAAAILAGDALLTHAFYSIVQSSRKHGIPADRVLSIVED 149
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAI 243
+ G +G+V GQ +++ Q G+T +E + K L G
Sbjct: 150 LAEYAGPRGMVGGQVADMEGEQ---------GLTSLEQLEYIHLHKTSDLIMFSLMAGGR 200
Query: 244 LGGGSEKEIELLRRYGFYVGM 264
+ G SE +I+ LR +G ++G+
Sbjct: 201 VAGCSEAQIDSLRSFGKHIGL 221
>gi|157692927|ref|YP_001487389.1| geranyltranstransferase [Bacillus pumilus SAFR-032]
gi|157681685|gb|ABV62829.1| geranyltranstransferase [Bacillus pumilus SAFR-032]
Length = 296
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 102/199 (51%), Gaps = 11/199 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++ M + + A + P L +A G + E I A+ ++H S IH++LP
Sbjct: 30 PKDLKSSMLYSLKAGGKRLRPVLVLALLNAYGKNEEDGIPVGCAVEMIHTYSLIHDDLPC 89
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D L + KPT + + T +L DA+L L+ +S + ++ + LR++ E+
Sbjct: 90 MDDDDL-RRGKPTNHKVYGEATAVLAGDALLTESFRLI-TSQLSSSVSADKKLRIVDELV 147
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
++ G+ G+V GQ+++++ Q ++ E+ Y + +K G+L A GA+L
Sbjct: 148 KSAGALGMVGGQFDDMEAEQ--------KQVSLAELEY-IHARKTGKLLTFSVAAGAMLA 198
Query: 246 GGSEKEIELLRRYGFYVGM 264
G S+ +IE LR + +++G+
Sbjct: 199 GASDDDIEKLREFSYHIGI 217
>gi|402848058|ref|ZP_10896325.1| Octaprenyl-diphosphate synthase [Rhodovulum sp. PH10]
gi|402501640|gb|EJW13285.1| Octaprenyl-diphosphate synthase [Rhodovulum sp. PH10]
Length = 320
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 95/204 (46%), Gaps = 17/204 (8%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P V E MR+ A + P L VA+ E+ GG RE+A++ AA+ V+H S +H++LP
Sbjct: 48 PARVLEAMRYASLAGGKRIRPYLAVASAEMFGGPRERALMVGAAVEVVHCYSLVHDDLPS 107
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD---NPAGNNSGRILRVMV 182
D L + +PT + + T +L DA+L + ++L +D +PA + +++
Sbjct: 108 MDNDEL-RRGRPTTHKQYDEATAILAGDALLTYAFDILGRTDTHPDPAVR-----IDLVL 161
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGI---TDVEMTYETYKKKEGRLHACGAA 239
+ RA G G+V GQ +L + R G+ D T K G L
Sbjct: 162 ALARASGLGGMVGGQMLDLAA-----EGRFAEGVPQPLDRAATETMESMKTGALLKFSCV 216
Query: 240 CGAILGGGSEKEIELLRRYGFYVG 263
GAI+ + L RYG +G
Sbjct: 217 GGAIVAEADQAARAALARYGTAIG 240
>gi|330834019|ref|YP_004408747.1| geranyltranstransferase [Metallosphaera cuprina Ar-4]
gi|329566158|gb|AEB94263.1| geranyltranstransferase [Metallosphaera cuprina Ar-4]
Length = 327
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 117/238 (49%), Gaps = 20/238 (8%)
Query: 47 TSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVA 106
T V+E I +++ V P E+YE R+ + A + P + V + EL+GG R++AI+A
Sbjct: 12 TQVNETIDKYIQGDV----P-ELYEASRYLLKAGGKRLRPLMVVLSSELLGGSRDRAILA 66
Query: 107 AAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASS 166
AA+ V+H + IH+++ D T + PT++ + T +L D + EL+ S
Sbjct: 67 GAAIEVLHNFTLIHDDIMDQDTTR---RGLPTVHVKWGIPTAILAGDLLHAKAFELITES 123
Query: 167 DNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETY 226
G R + +R++ V EGQ +++ + D +T+ + E
Sbjct: 124 --IKGLPIDLAYRALNCFSRSIVI--VSEGQAMDMEFERRWD-------VTE-NLYLEMI 171
Query: 227 KKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
+KK +L AC A G +L G+ +E+ L +G +G+ I+ LG T + +EL K
Sbjct: 172 RKKTAQLFACSAHLGGLLANGTNEEVNSLYDFGEKIGIAFQIMDDILGITADEKELGK 229
>gi|240103885|ref|YP_002960194.1| Bifunctional short chain isoprenyl diphosphate synthase (idsA)
[Thermococcus gammatolerans EJ3]
gi|239911439|gb|ACS34330.1| Bifunctional short chain isoprenyl diphosphate synthase (idsA)
[Thermococcus gammatolerans EJ3]
Length = 343
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 104/218 (47%), Gaps = 27/218 (12%)
Query: 52 DIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALH 111
D+ + + V KEP +Y+ RH+ A + P + + A E VGG E+A+ AAA+
Sbjct: 17 DVDKIILELVPEKEPKTLYDAARHYPLAGGKRVRPFVVLRATEAVGGDPEKALYPAAAVE 76
Query: 112 VMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD-NPA 170
+H S +H+++ D + + +PT++ + N +L D + E +A + +P
Sbjct: 77 FIHNYSLVHDDIMDMDE---LRRGRPTVHKVWGINMAILAGDLLFSKAFEAVAKAKVDP- 132
Query: 171 GNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKK-- 228
+ RIL V+V+ S + EGQ +++ D E+T + Y K
Sbjct: 133 -DKKARILEVLVKT-----SNELCEGQALDIEFETRD------------EVTVDEYLKMI 174
Query: 229 --KEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
K G L A GAI+G +E+ I+ L ++G VG+
Sbjct: 175 SGKTGALFDGSATIGAIVGTDNEEYIQALSKWGRNVGI 212
>gi|218778692|ref|YP_002430010.1| polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01]
gi|218760076|gb|ACL02542.1| Polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01]
Length = 307
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 10/200 (5%)
Query: 65 EPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLP 124
E V + MRH +FA + P LC+ + E VGG+++ + AAAL +H S IH++LP
Sbjct: 39 EESRVTQAMRHSLFAGGKRLRPILCMTSAEAVGGNKDHVMDVAAALEFIHTYSLIHDDLP 98
Query: 125 LSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEM 184
+ PT + AF T +L D +L E+L+ + + + ++L ++ +
Sbjct: 99 AL-DDDDYRRGTPTCHKAFDEATAILAGDGLLTSAFEILSHAADDGLLPAEKVLTIIAGI 157
Query: 185 TRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAIL 244
+ A G G++ GQ +++ +T E+ + + K G + GA L
Sbjct: 158 SHAAGCNGMILGQMLDIEGEH--------ESLTREELE-DIHNNKTGAMIEVSVFSGAYL 208
Query: 245 GGGSEKEIELLRRYGFYVGM 264
GGG+ ++I L Y VG+
Sbjct: 209 GGGTPEQIAALDVYAKNVGL 228
>gi|291532853|emb|CBL05966.1| farnesyl-diphosphate synthase [Megamonas hypermegale ART12/1]
Length = 292
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
++ + M + + A + P L +AA + +G E+ + + ++ +H S IH++LP D
Sbjct: 30 DLAKAMNYSLMAGGKRLRPILIMAAADALGVDGEKFLRLSTSIEFIHTYSLIHDDLPAMD 89
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
+ K T + F +L DA+L E++A+ N ++++ EM++A
Sbjct: 90 NDDY-RRGKLTNHKVFGEALAILAGDALLTMAFEIIATDKNVDAETK---IKIITEMSKA 145
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G++G+V GQ ++Q N D++ + + K G L GAIL G
Sbjct: 146 AGAEGMVGGQVIDMQSE---------NKKIDIQTLKQMHAAKTGALFCAAIRSGAILAGA 196
Query: 248 SEKEIELLRRYGFYVGM 264
EK++ L Y G+
Sbjct: 197 DEKQLANLTEYARQFGL 213
>gi|423082397|ref|ZP_17070989.1| putative geranyltranstransferase [Clostridium difficile
002-P50-2011]
gi|423087809|ref|ZP_17076195.1| putative geranyltranstransferase [Clostridium difficile
050-P50-2011]
gi|357544123|gb|EHJ26129.1| putative geranyltranstransferase [Clostridium difficile
050-P50-2011]
gi|357548723|gb|EHJ30583.1| putative geranyltranstransferase [Clostridium difficile
002-P50-2011]
Length = 295
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 13/206 (6%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
V E M + + A + P L + AC++VGG+ ++AI A A+ ++H S IH++LP D
Sbjct: 32 VIEAMNYSLSAGGKRLRPILTLEACKIVGGNEDEAIPFAIAIEMIHTYSLIHDDLPALDN 91
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE-LLASSDNPAGNNSGRILRVMVEMTRA 187
L + +PT + + +L DA+L + E +LA S N N + L+ + E+ +
Sbjct: 92 DDL-RRGRPTNHKVYGEAMGILAGDALLNYAFEVMLAGSINK--ENPEKYLKAINEIAKG 148
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G G++ GQ +++ + KL+ Y K + C A GA +GG
Sbjct: 149 AGIYGMIGGQVVDVESENKQIEKEKLD--------YIHMNKTAAMMVGCMRA-GATIGGA 199
Query: 248 SEKEIELLRRYGFYVGMIQGIVSRRL 273
+ +++E + +Y +G+ IV L
Sbjct: 200 NFEQMEEITKYAKNIGLSFQIVDDIL 225
>gi|134100514|ref|YP_001106175.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase
[Saccharopolyspora erythraea NRRL 2338]
gi|291005007|ref|ZP_06562980.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase
[Saccharopolyspora erythraea NRRL 2338]
gi|133913137|emb|CAM03250.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase
[Saccharopolyspora erythraea NRRL 2338]
Length = 345
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 86/179 (48%), Gaps = 19/179 (10%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
PAL V A E VGG A+ AA A+ ++H S +H+++ D L + + T + F
Sbjct: 66 PALVVLAAEAVGGSPATALPAAVAVELVHNFSLLHDDVMDGD---LTRRHRATAWRVFGN 122
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
+L DA+L ++LA+S +PA R L V +V+GQ +L +
Sbjct: 123 GPAILAGDALLTLASDVLAASGHPAAQAGVRTLNTAVLE--------LVDGQVADLAFEK 174
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
DD G+ + + K G L C A GA GGGS +++E LRR+G +G+
Sbjct: 175 RDD-----VGVAECQTMV---AGKTGALLGCACAVGADFGGGSTEQVEHLRRFGELLGL 225
>gi|223477976|ref|YP_002582296.1| geranylgeranyl pyrophosphate synthase [Thermococcus sp. AM4]
gi|214033202|gb|EEB74030.1| Geranylgeranyl pyrophosphate synthetase [Thermococcus sp. AM4]
Length = 343
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 111/238 (46%), Gaps = 25/238 (10%)
Query: 51 EDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAAL 110
+D+ + + V K+P ++YE RH+ A + P + + A E VGG E+A+ AAA+
Sbjct: 16 KDVDKIILELVPEKDPKKLYEAARHYPLAGGKRVRPFVVLRAAEAVGGDPEKALYPAAAV 75
Query: 111 HVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPA 170
+H S +H+++ D + + +PT++ + N +L D + E +A ++ +
Sbjct: 76 EFIHNYSLVHDDIMDMDE---LRRGRPTVHKVWGVNMAILAGDLLFSKAFEAIAKAE-VS 131
Query: 171 GNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKK-- 228
RIL V+V+ S + EGQ +++ D E+T + Y K
Sbjct: 132 PEKKARILEVLVKT-----SNELCEGQALDIEFETKD------------EVTVDEYLKMI 174
Query: 229 --KEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
K G L A GAI+G +E+ I L ++G VG+ I L + E+L K
Sbjct: 175 SGKTGALFDGSATIGAIVGTDNEEYIRALSKWGRNVGIAFQIWDDVLDLIADEEKLGK 232
>gi|354604612|ref|ZP_09022601.1| hypothetical protein HMPREF9450_01516 [Alistipes indistinctus YIT
12060]
gi|353347191|gb|EHB91467.1| hypothetical protein HMPREF9450_01516 [Alistipes indistinctus YIT
12060]
Length = 324
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 102/220 (46%), Gaps = 22/220 (10%)
Query: 48 SVHEDIGAHLRQAVVV---KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAI 104
S+HE I R+ + P +YEP+R+ + A + PAL + AC L A
Sbjct: 3 SLHELIAMSERELAQLPYPARPAGLYEPIRYALGAGGKRIRPALVLMACNLFQEAVTAAK 62
Query: 105 VAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA 164
AA A+ V H + +H+++ + T + KP+++ + NT +L DAML + LLA
Sbjct: 63 PAALAVEVFHNFTLLHDDIMDNADTR---RGKPSVHKKWNDNTAILSGDAMLIYAYRLLA 119
Query: 165 SSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYE 224
D + R+L V E+ + GV EGQ Q D D K ++ E
Sbjct: 120 GCDE---KSLPRLLTVFNEV-----AVGVCEGQ-------QYDMDFEKRTDVSVAEYL-R 163
Query: 225 TYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
+ K L A GAI GGGS+ +LL +YG +G+
Sbjct: 164 MIELKTAVLLAGALKLGAICGGGSDMATDLLYKYGISIGL 203
>gi|332799347|ref|YP_004460846.1| polyprenyl synthetase [Tepidanaerobacter acetatoxydans Re1]
gi|332697082|gb|AEE91539.1| Polyprenyl synthetase [Tepidanaerobacter acetatoxydans Re1]
Length = 296
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 10/208 (4%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P +++E M + + + P + + A EL G E+ I A + ++H S IH++LP+
Sbjct: 30 PSKLHEAMHYSTLSGGKRLRPIIVMKAAELFGISYEKVIPTACGIEMIHTYSLIHDDLPV 89
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D + KPT + + LL DA+L +A + +G N ++ V+ +++
Sbjct: 90 MDNDDF-RRGKPTCHKIYGDAVALLAGDALLTHAFATIAKNSKISGINPDAVVDVIEKVS 148
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
A G G++ GQ ++ S D + + K G L + GA L
Sbjct: 149 LAAGGYGMIGGQTVDIITSGKD---------VSRDTLFYISTHKTGCLMSVSFWSGARLA 199
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRL 273
G S++++E ++ +G +G+I IV L
Sbjct: 200 GASKEDLETIKCFGEKLGLIFQIVDDIL 227
>gi|433284426|emb|CCO06628.1| geranyltranstransferase [Candidatus Desulfamplus magnetomortis
BW-1]
Length = 322
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 22/244 (9%)
Query: 40 NKNKSYWTSVHEDIGAHLRQAVVVKEPV------------EVYEPMRHFVFAAPVNMAPA 87
NK+ + T D+ A+L++ + + E+ + + H + A + P
Sbjct: 2 NKSINITTDTLFDLSAYLKEKRAILDDYLKKVIQELNPENELAKAIEHSLMAGGKRLRPI 61
Query: 88 LCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNT 147
L +AA + G A+ AA ++ ++H S IH++LP D L + PT + AF T
Sbjct: 62 LAMAAAQATGKDFRLALPAACSIEMIHTYSLIHDDLPAMDNDDL-RRGIPTCHKAFSEAT 120
Query: 148 ELLVADAMLPFGLELLASSDNPAG-----NNSGRILRVMVEMTRAMGSQGVVEGQYNELQ 202
+L DA+L +L + NP N + +++ ++RA G+ G+VEGQ ++Q
Sbjct: 121 AILAGDALLTHAFTIL--THNPRAMFDPCPNDEILFKLVAMISRAAGAHGMVEGQMMDMQ 178
Query: 203 CSQCDD--DDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGF 260
+ D + K+N + + ++ K G++ GA+ G +IE L +Y
Sbjct: 179 ATGFLDQHNQSKVNIDNCLAHLKKLHELKTGKMIVVSVESGALSAGADPDQIERLAKYAG 238
Query: 261 YVGM 264
VG+
Sbjct: 239 KVGL 242
>gi|291279338|ref|YP_003496173.1| geranyl diphosphate synthase / farnesyl diphosphate synthase
[Deferribacter desulfuricans SSM1]
gi|290754040|dbj|BAI80417.1| geranyl diphosphate synthase / farnesyl diphosphate synthase
[Deferribacter desulfuricans SSM1]
Length = 300
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 104/223 (46%), Gaps = 10/223 (4%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
++ + + E MR+ +FA + P L ++ + + ++ AAA+ ++H S IH++L
Sbjct: 31 EQTIGLIESMRYSIFAGGKRLRPVLIYSSYGIFESYFDKVTPFAAAVEMLHTYSLIHDDL 90
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE 183
P D L + KPT + F T +L DA+L E++ D + IL +
Sbjct: 91 PAMDDDDL-RRGKPTNHKMFGEATAILAGDALLTLAFEIMLDKDINKDIPTETILEAAFK 149
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAI 243
+ ++ G +G+V GQY ++ + D L+ I +K K L + GAI
Sbjct: 150 LAKSAGYKGMVGGQYADIINENKEIDKNTLDFI---------HKHKTAALISYCCELGAI 200
Query: 244 LGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLA 286
LG EK+ + L +G +G+ IV L T EEL K A
Sbjct: 201 LGFADEKDKQNLAEFGEKIGLAFQIVDDILDITSTTEELGKNA 243
>gi|438002488|ref|YP_007272231.1| Octaprenyl-diphosphate synthase [Tepidanaerobacter acetatoxydans
Re1]
gi|432179282|emb|CCP26255.1| Octaprenyl-diphosphate synthase [Tepidanaerobacter acetatoxydans
Re1]
Length = 286
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 10/208 (4%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P +++E M + + + P + + A EL G E+ I A + ++H S IH++LP+
Sbjct: 20 PSKLHEAMHYSTLSGGKRLRPIIVMKAAELFGISYEKVIPTACGIEMIHTYSLIHDDLPV 79
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D + KPT + + LL DA+L +A + +G N ++ V+ +++
Sbjct: 80 MDNDDF-RRGKPTCHKIYGDAVALLAGDALLTHAFATIAKNSKISGINPDAVVDVIEKVS 138
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
A G G++ GQ ++ S D + + K G L + GA L
Sbjct: 139 LAAGGYGMIGGQTVDIITSGKD---------VSRDTLFYISTHKTGCLMSVSFWSGARLA 189
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRL 273
G S++++E ++ +G +G+I IV L
Sbjct: 190 GASKEDLETIKCFGEKLGLIFQIVDDIL 217
>gi|5631297|dbj|BAA82614.1| farnesyl diphosphate synthase (SelFPS) [Synechococcus elongatus]
Length = 300
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 23/229 (10%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P +++ MR+ V + P LC AA E+ G E+ AAAAL ++H S +H++LP
Sbjct: 34 PQRLHQAMRYAVLGGGKRVRPLLCYAAGEVSGAELERLSTAAAALELIHVYSLVHDDLPC 93
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLAS---SDNPAGNNSGRILRVMV 182
D ++ + KPT + + T LL D++ +LLA +D+P LR++
Sbjct: 94 MD-DDVLRRGKPTCHVEYDEATALLAGDSLQSLAFQLLAEYRVADSPQTQ-----LRMLE 147
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHAC---GAA 239
+ RA GS+G+ GQ +L+ + +T E+ + K + A GA
Sbjct: 148 HLARAAGSRGMAGGQAIDLEATG--------KTLTLPELEFMHIHKTGALIRASVILGAN 199
Query: 240 CGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
CG L + K+++ L + +G+ +V L L K A K
Sbjct: 200 CGRAL---ASKDMDRLDHFAKRIGLAFQVVDDVLDAQSTTATLGKTAGK 245
>gi|357012959|ref|ZP_09077958.1| polyprenyl synthetase [Paenibacillus elgii B69]
Length = 301
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 10/199 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P + E M + + A + P L +AA E +GG E A+ AA A+ ++H S IH++LP
Sbjct: 33 PAPLRESMMYSLMAGGKRLRPILVLAAAEALGGSPEAAVPAALAVEIIHTYSLIHDDLPA 92
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D + KPT + + +L DA+L + S + R++ ++ E++
Sbjct: 93 MDNDDF-RRGKPTNHKVYGEAMAILAGDALLTHAFYSVVQSARKHNIPADRVVDIVEELS 151
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
R G+ G+V GQ ++ Q G+T +E + K L G +
Sbjct: 152 RLSGAPGMVGGQAADMLGEQ---------GVTKLEELEYIHLHKTSDLIVFSLKAGGRIA 202
Query: 246 GGSEKEIELLRRYGFYVGM 264
G +E ++ L R+G +G+
Sbjct: 203 GATEAQLAALERFGTCIGL 221
>gi|375085374|ref|ZP_09732017.1| hypothetical protein HMPREF9454_00628 [Megamonas funiformis YIT
11815]
gi|374567392|gb|EHR38611.1| hypothetical protein HMPREF9454_00628 [Megamonas funiformis YIT
11815]
Length = 292
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
++ + M + + A + P L +AA + +G E+ + + ++ +H S IH++LP D
Sbjct: 30 DLAKAMNYSLMAGGKRLRPILIMAAADALGVDGEKFLRLSTSIEFIHTYSLIHDDLPAMD 89
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
+ K T + F +L DA+L E++A+ N ++++ EM++A
Sbjct: 90 NDDY-RRGKLTNHKVFGEALAILAGDALLTMAFEIIATDKNVDAETK---VKIITEMSKA 145
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G++G+V GQ ++Q N D++ + + K G L GAIL G
Sbjct: 146 AGAEGMVGGQVIDMQSE---------NKKIDIQTLKQMHAAKTGALFCAAIRSGAILAGA 196
Query: 248 SEKEIELLRRYGFYVGM 264
EK++ L Y G+
Sbjct: 197 DEKQLANLTEYARQFGL 213
>gi|312793194|ref|YP_004026117.1| polyprenyl synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180334|gb|ADQ40504.1| Polyprenyl synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 299
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 106/227 (46%), Gaps = 13/227 (5%)
Query: 41 KNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHR 100
K + Y + + HL + + + P +Y+ MR+ VFA + P LC+ + +++ +
Sbjct: 5 KLEEYINLSQKKVEEHLEKILAERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMLSKDQ 64
Query: 101 E--QAIV-AAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLP 157
E Q I+ A+A+ ++H S IH++LP D ++ + KPT + F +L DA+L
Sbjct: 65 EVDQKILDIASAIELIHTYSLIHDDLPAMD-NDVLRRGKPTNHVVFGEAIAILAGDALLN 123
Query: 158 FGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGIT 217
E+ G +++ + A G +G++ GQ ++ S D I
Sbjct: 124 LAAEVCMDWILRYGCEKN-LVKAAKYLFWASGVEGMIGGQVIDITNSGQD--------IK 174
Query: 218 DVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
E+ +E + KK RL CGA++ G + + + +G +G+
Sbjct: 175 SEELLFEMHLKKTSRLIQASCVCGALVAGAEDDVVYDMEEFGKNLGL 221
>gi|452992580|emb|CCQ96007.1| Polyprenyl synthetase [Clostridium ultunense Esp]
Length = 289
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 108/225 (48%), Gaps = 15/225 (6%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
+++E + + +F + P L + +CE++GG +++I A A+ ++H S IH++LP D
Sbjct: 31 KIFESINYSLFTGGKRLRPILLLKSCEMLGGEHKRSIPFAMAIEMIHTYSLIHDDLPSMD 90
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLAS---SDNPAGNNSGRILRVMVEM 184
+ + T + + +L D +L E++ ++ + R + + E+
Sbjct: 91 DDDF-RRGRLTNHKVYGEAIAVLSGDGLLNLAFEIMVDFTLKNSKTIEDYKRNIWAIDEI 149
Query: 185 TRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAIL 244
+ G G++ GQ +L ++ D+ KL YK K L GAIL
Sbjct: 150 GKYSGIYGMIGGQVVDLLSNEIAMDEDKL---------LFMYKSKTAALIQASLVAGAIL 200
Query: 245 GGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEE--IEELKKLAF 287
GGG +++IE +RR+G Y+G+ I L E+ I ++ L+F
Sbjct: 201 GGGCKEDIERMRRFGLYLGLAYQIRDDILDVNEDKSINKVTYLSF 245
>gi|125569734|gb|EAZ11249.1| hypothetical protein OsJ_01102 [Oryza sativa Japonica Group]
Length = 219
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGR 176
S IH+++P D +L + +P+ + AF T LL DA+ E +A G + R
Sbjct: 2 SLIHDDMPCMDDDAL-RRGRPSNHVAFGEFTALLAGDALHALAFEHVARGCGDHGVPADR 60
Query: 177 ILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGI-TDVEMTYETYKKKEGRLHA 235
LR + E+ A G+ GV GQ D++ G+ + M + K RL
Sbjct: 61 TLRAVAELGSASGTGGVAAGQVA----------DKESEGLPVSLAMLEYIHVHKTARLLE 110
Query: 236 CGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVN 293
A GAI+GGG++ E+E +RRY VG++ +V L T E+L K A K E +
Sbjct: 111 AAAVSGAIVGGGADAEVERVRRYARCVGLLFQVVDDVLDMTSTSEQLGKTAGKDVEAD 168
>gi|406980661|gb|EKE02234.1| Polyprenyl synthetase [uncultured bacterium]
Length = 302
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 104/232 (44%), Gaps = 11/232 (4%)
Query: 53 IGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHV 112
I +L + + ++ P ++E MR+ + + P L + + GG+ E I A A+ +
Sbjct: 22 INTYLEKYLEIRYPQIIWESMRYTTLSDGKRIRPVLALESARACGGNIENVIPTACAIEM 81
Query: 113 MHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGN 172
+HA S IH++LP D + + T + + +L DA+L + +++ PA
Sbjct: 82 IHAQSLIHDDLPCMDNDDY-RRGRLTNHKVYGEAFAVLAGDALLSYAPQIIIQH-TPAYV 139
Query: 173 NSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGR 232
+ + +V+ E+ A G+ G++ GQ ++ + D N I + K G
Sbjct: 140 DRDLLFQVLEELAIAAGALGLIGGQVIDIDSENKEIDIPTFNYI---------HTHKTGE 190
Query: 233 LHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
L GA+L +++++E+L YG VG I L T E L K
Sbjct: 191 LFKFAMRSGALLSQATDEQLEILTEYGRLVGYAFQIADDILDITGTKESLGK 242
>gi|323455416|gb|EGB11284.1| hypothetical protein AURANDRAFT_52464 [Aureococcus anophagefferens]
Length = 352
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 94/197 (47%), Gaps = 10/197 (5%)
Query: 15 APRRNHSRPSLSYRPMMVTMAMSTPNKN------KSYWTSVHEDIGAHLRQAVVVKEPVE 68
AP H+R S R ++ ++++P + K+Y+ + L +++ P
Sbjct: 26 APAFRHAR-SPVVRSVLAEPSVASPAELAKDFDLKAYFAQKVAAVEKALDESLTCTTPET 84
Query: 69 --VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLS 126
+ E MR+ + A + P +C+AACE+ GG A+ A A+ ++H S IH++LP
Sbjct: 85 KIIVESMRYSLLAGGKRVRPVMCIAACEMFGGTEAMAMPTAVAIEMIHTMSLIHDDLPAM 144
Query: 127 DRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTR 186
D L + PT + + + +L DA+L E A G + RI+ + +
Sbjct: 145 DNDDL-RRGMPTNHVIYGDDVAILAGDALLSTSFEHCAVGSTAEGIPAERIVETIRRLGE 203
Query: 187 AMGSQGVVEGQYNELQC 203
A+G+ G+ GQ +L+C
Sbjct: 204 AVGAVGLAGGQVMDLEC 220
>gi|402303522|ref|ZP_10822615.1| putative geranyltranstransferase [Selenomonas sp. FOBRC9]
gi|400378360|gb|EJP31217.1| putative geranyltranstransferase [Selenomonas sp. FOBRC9]
Length = 295
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 109/227 (48%), Gaps = 21/227 (9%)
Query: 43 KSYWTS----VHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGG 98
K W S V + A L + ++ + + M + + A + P L +AA + VG
Sbjct: 6 KELWQSRRTLVERALQAELDRTDILDDKLRA--SMAYSLMAGGKRLRPILLMAAADAVGA 63
Query: 99 HREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPF 158
+ I AA AL ++H S IH++LP D + K T + A+ T +L DA+L
Sbjct: 64 DGTKFITAACALEMIHTYSLIHDDLPAMDNDD-YRRGKLTNHKAYDEGTAILAGDALLTL 122
Query: 159 GLEL-LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGIT 217
+ L D PA R+LRV+ EM+RA G++G+V GQ +L+ ++R+++
Sbjct: 123 AFTMILRQQDVPA----ERLLRVVDEMSRAAGAEGMVGGQMLDLEA-----ENRRIS--- 170
Query: 218 DVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
+E + K G L GAIL G SE+++ L Y + G+
Sbjct: 171 -MEELRRVHMGKTGALFRAALRSGAILAGASEQQLAALTAYADHFGL 216
>gi|302389865|ref|YP_003825686.1| farnesyl-diphosphate synthase [Thermosediminibacter oceani DSM
16646]
gi|302200493|gb|ADL08063.1| farnesyl-diphosphate synthase [Thermosediminibacter oceani DSM
16646]
Length = 296
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 10/208 (4%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P +++E MR+ F + P L + A EL G E+ I A + ++H S IH++LP+
Sbjct: 30 PQKIHEAMRYSTFNGGKRIRPVLTMKAAELFGLQGEKVIPTACGIEMIHTYSLIHDDLPI 89
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D + KPT + F LL DA+L + + G + ++ V+ ++
Sbjct: 90 MDNDDF-RRGKPTCHKVFGDAIALLAGDALLTLAFNTIVKNAQIEGISMQAVIDVIGRIS 148
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
RA GS G++ GQ ++ D++ L M Y K G L GA L
Sbjct: 149 RASGSLGMIGGQTVDILSQGVSIDEKTL-----FYMDYH----KTGCLIQASLWAGARLA 199
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRL 273
++ L +G +G+I IV L
Sbjct: 200 EAPASDLNKLDIFGEKIGLIFQIVDDLL 227
>gi|375254706|ref|YP_005013873.1| polyprenyl synthetase [Tannerella forsythia ATCC 43037]
gi|363406645|gb|AEW20331.1| polyprenyl synthetase [Tannerella forsythia ATCC 43037]
Length = 327
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 21/200 (10%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P +++P+ + + + PA + AC L EQAI A + V H + +H++L
Sbjct: 24 PQSLFDPIVYTLSLGGKRIRPAFTLMACNLYSSEVEQAIKPALGIEVFHNFTLLHDDLMD 83
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEM- 184
R + +PT++ + NT +L DAML L+ G S +L+ ++++
Sbjct: 84 EARKR---RGQPTVHVKWNRNTAVLSGDAMLITAYRLI-------GETSSELLKKILDLF 133
Query: 185 TRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAIL 244
TR + + EGQ +++ D +T+ E E + K L AC GA++
Sbjct: 134 TRT--ALEICEGQQYDMEFESRPD-------VTEAEYL-EMIRLKTAVLLACSLKTGALI 183
Query: 245 GGGSEKEIELLRRYGFYVGM 264
GG SE E ++L R+G Y+G+
Sbjct: 184 GGASEHEADILYRFGIYIGL 203
>gi|383788447|ref|YP_005473016.1| geranyltranstransferase [Caldisericum exile AZM16c01]
gi|381364084|dbj|BAL80913.1| geranyltranstransferase [Caldisericum exile AZM16c01]
Length = 298
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 102/222 (45%), Gaps = 9/222 (4%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
++E +Y + + + A + P + +A E E + AA++ ++H S IH++
Sbjct: 27 IREDSPLYAAINYSLMAGGKRLRPIMLIATYESNFEDYEVVLPFAASVEMIHTYSLIHDD 86
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP+ D + + KPT + + + LL DA++ E+++S + +LR++
Sbjct: 87 LPILDNSDY-RRGKPTCHKIYGSDMALLAGDALISLAFEIISSRKLLEHFEAKFLLRIVH 145
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+ G++G+V GQ ++ D+ D L I +E K+K L GA
Sbjct: 146 DFAELSGAKGLVGGQVMDMVTMDMDEIDENL--ILYIE------KRKTASLFILSVRVGA 197
Query: 243 ILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
IL G SE E+ L ++ G+ I L T +EEL K
Sbjct: 198 ILSGVSEDELANLTKFAENFGISYQIQDDILDETSTVEELGK 239
>gi|350536851|ref|NP_001234268.1| geranylgeranyl pyrophosphate synthetase-like protein [Solanum
lycopersicum]
gi|76363949|gb|ABA41594.1| geranylgeranyl pyrophosphate synthetase-like protein [Solanum
lycopersicum]
Length = 206
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 74/125 (59%), Gaps = 3/125 (2%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L AV +KEPV ++E MR+ + A + P LC+AACELVGG A+ AA A+ ++H
Sbjct: 84 LESAVSIKEPVMIHESMRYSLLAGGKRIRPMLCIAACELVGGVESTAMPAACAVEMIHTM 143
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGR 176
S IH++LP D L + KPT + + + +L DA+L E +A+ + G +S R
Sbjct: 144 SLIHDDLPCMDNDDL-RRGKPTNHKIYGEDVAVLAGDALLALAFEHIAT--HTKGVSSDR 200
Query: 177 ILRVM 181
I+RV+
Sbjct: 201 IVRVI 205
>gi|320354500|ref|YP_004195839.1| farnesyl-diphosphate synthase [Desulfobulbus propionicus DSM 2032]
gi|320123002|gb|ADW18548.1| farnesyl-diphosphate synthase [Desulfobulbus propionicus DSM 2032]
Length = 298
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 71 EPMRHFVFAAPVNMAPALCVAACELVG---GHREQAIVAAAALHVMHAASFIHENLPLSD 127
E MR+ +F + P LC+A E V R++A+ A AL +H S IH++LP D
Sbjct: 34 ESMRYSLFVGGKRIRPILCLAGAEAVDSGEATRQRALSVACALECIHTYSLIHDDLPAMD 93
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
L + KPT + F +L D +L F +LL+S + N++ RI R++ + RA
Sbjct: 94 DDDL-RRGKPTNHTVFGEAAAILAGDGLLTFAFDLLSSQASADINDAARI-RIIQTIARA 151
Query: 188 MGSQGVVEGQYNEL--QCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
G G+V GQ ++ + Q EM ++ K G L GA++
Sbjct: 152 AGPLGMVGGQSLDMIYEGQQVG-----------YEMLRTIHRSKTGALITASVLSGAMVA 200
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
G S ++ L+ YG +G+ IV L E+L K
Sbjct: 201 GASAEQETALKTYGDNIGLAFQIVDDLLDVEATTEQLGK 239
>gi|37519985|ref|NP_923362.1| geranylgeranyl pyrophosphate synthase [Gloeobacter violaceus PCC
7421]
gi|35210977|dbj|BAC88357.1| geranylgeranyl pyrophosphate synthase [Gloeobacter violaceus PCC
7421]
Length = 295
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 109/245 (44%), Gaps = 12/245 (4%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
+Y + A L + + + P ++YE MR+ + A + P LC+ +C + GG + A
Sbjct: 8 AYLRQCRSQVEAALDRYLPQQYPDKLYEAMRYSLLAGGKRLRPILCLTSCRMSGGSADLA 67
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ A AL ++H S IH++LP + K T + + + +L DA+L + +L+
Sbjct: 68 MPTACALEMVHTMSLIHDDLPAM-DDDDYRRGKLTNHKVYGEDMAILAGDALLAYAFQLI 126
Query: 164 ASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTY 223
A + G R++ V+ + +A G+V GQ +L+ + R + +E
Sbjct: 127 A--EKTVGAQPERVVEVLGRLGKAASGAGLVGGQVVDLE-----SEGRTIT----LETLE 175
Query: 224 ETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELK 283
+ K G L GAIL G +E L RY +G+ I L T EL
Sbjct: 176 YIHTHKTGALLEVSVISGAILAGADGGVVERLTRYSRCIGLAFQIRDDLLDITATQAELG 235
Query: 284 KLAFK 288
K A K
Sbjct: 236 KTAGK 240
>gi|20089495|ref|NP_615570.1| bifunctional short chain isoprenyl diphosphate synthase
[Methanosarcina acetivorans C2A]
gi|19914402|gb|AAM04050.1| bifunctional short chain isoprenyl diphosphate synthase
[Methanosarcina acetivorans C2A]
Length = 324
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 111/235 (47%), Gaps = 24/235 (10%)
Query: 30 MMVTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALC 89
MM+ M + K S+ + A + + + V P E+Y+ R+ V A + PA+
Sbjct: 1 MMLMMLIDEIKKRSSH-------VDAAINELLPVTHPEELYKASRYLVDAGGKRLRPAVL 53
Query: 90 VAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTEL 149
+ A E VG + + AA A+ ++H + IH+++ D I + P ++ + +
Sbjct: 54 ILAAEAVGSDLKSVLPAAVAVELVHNFTLIHDDIMDKDN---IRRGMPAVHVKWGEAGAI 110
Query: 150 LVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDD 209
L D + E+L+ + N+ RIL+ M +++ + EGQ+ D D
Sbjct: 111 LAGDTLYSKAFEILSKVE----NDPVRILKCMDVLSKT--CTEICEGQW-------LDMD 157
Query: 210 DRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
K + +T++E E +KK L+A A GA+LGG S++ E L YG +G+
Sbjct: 158 FEKRDRVTELEY-LEMVEKKTSVLYAAAAKIGALLGGASDEVAESLSEYGRLIGI 211
>gi|288818510|ref|YP_003432858.1| geranylgeranyl pyrophosphate synthase [Hydrogenobacter thermophilus
TK-6]
gi|384129263|ref|YP_005511876.1| polyprenyl synthetase [Hydrogenobacter thermophilus TK-6]
gi|288787910|dbj|BAI69657.1| geranylgeranyl pyrophosphate synthase [Hydrogenobacter thermophilus
TK-6]
gi|308752100|gb|ADO45583.1| Polyprenyl synthetase [Hydrogenobacter thermophilus TK-6]
Length = 264
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 102/224 (45%), Gaps = 20/224 (8%)
Query: 46 WTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIV 105
W S I + LR+ + EP +Y+ M ++VF + P A +GG+ + AI
Sbjct: 5 WKS---QIESRLRELLKPFEPRILYDAMSYYVFQEGKRIRPLFLCAVSNALGGNLQDAIT 61
Query: 106 AAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLAS 165
A+ +H S +H++LP D + KP+ + F + +L DA+L E L++
Sbjct: 62 VGCAIEFIHNYSLVHDDLPALDNDDF-RRGKPSCHVLFGEDMAILAGDALLNLAFETLSN 120
Query: 166 SDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYET 225
+N + ++ ++ ++ + G QG+V GQ D +KL + +
Sbjct: 121 RENFISLSEKDLIYIIRLVSESSGFQGMVGGQVM---------DVKKLGDPWSISL---- 167
Query: 226 YKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIV 269
KK + + ACG I+ E+ +E L + G VG++ ++
Sbjct: 168 --KKTASMFSAVFACGGIISKKYER-VEYLSKAGTQVGLLFQLI 208
>gi|388456998|ref|ZP_10139293.1| polyprenyl synthetase [Fluoribacter dumoffii Tex-KL]
Length = 299
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 20/226 (8%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
K+P E+++ MR+ V + AL A E +G + +A+ ++HA S IH++L
Sbjct: 30 KQPAELHKAMRYAVLNGGKRIRAALVYATGEALGADFDVLDHIGSAIEMIHAFSLIHDDL 89
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE 183
P D L + KP+ + AF T +L DA+ E +AS D + + + +E
Sbjct: 90 PALDNDDL-RRGKPSCHKAFSEATAILAGDALQTLAFETIASLD-----KNKIAVEIEIE 143
Query: 184 M----TRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAA 239
M RA+GS G+ G+ +++ D D LN + + TYK K G L
Sbjct: 144 MIRLLARAIGSLGMAGGEELDIEMK---DKDVSLNELEN------TYKLKTGYLLTASIL 194
Query: 240 CGAILGGGSEKEI-ELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
GA+ +K I L+++G Y+G+ I +G + + L K
Sbjct: 195 LGALAANCHDKNILNNLQKFGDYIGLAFQIHDDIIGIESDTQTLGK 240
>gi|344995715|ref|YP_004798058.1| polyprenyl synthetase [Caldicellulosiruptor lactoaceticus 6A]
gi|343963934|gb|AEM73081.1| Polyprenyl synthetase [Caldicellulosiruptor lactoaceticus 6A]
Length = 299
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 105/227 (46%), Gaps = 13/227 (5%)
Query: 41 KNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHR 100
K + Y + + HL + + + P +Y+ MR+ VFA + P LC+ + +++ +
Sbjct: 5 KLEEYINLSQKKVEEHLEKILAERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMLSKDQ 64
Query: 101 E--QAIV-AAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLP 157
E Q I+ A+A+ ++H S IH++LP D ++ + KPT + F +L DA+L
Sbjct: 65 EVDQKILDIASAIELIHTYSLIHDDLPAMD-NDVLRRGKPTNHVVFGEAIAILAGDALLN 123
Query: 158 FGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGIT 217
E+ G +++ + + G +G++ GQ ++ S D I
Sbjct: 124 LAAEVCMDWILRCGCEKN-LVKAAKYLFWSSGVEGMIGGQVIDITNSGQD--------IK 174
Query: 218 DVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
E+ +E + KK RL CGA++ G + + +G +G+
Sbjct: 175 SEELLFEMHLKKTSRLIQASCVCGALVAGAENDVVSDMEEFGKNLGL 221
>gi|327398343|ref|YP_004339212.1| farnesyltranstransferase [Hippea maritima DSM 10411]
gi|327180972|gb|AEA33153.1| Farnesyltranstransferase [Hippea maritima DSM 10411]
Length = 291
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 103/207 (49%), Gaps = 12/207 (5%)
Query: 88 LCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNT 147
L + A ++ G +++ A+A+ +MHA S IH++LP+ D + KP + + +
Sbjct: 48 LVMCAADMFGADETKSLHIASAIELMHAYSLIHDDLPVMDNDDF-RRGKPANHKVYGEDL 106
Query: 148 ELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCD 207
LLV D + + ++A D P + R ++++ ++ G G+V GQ ++ S+
Sbjct: 107 ALLVGDGLNTYTFNVIA--DAPI--DDARKVKIVKWLSNNAGIGGMVVGQVVDVLSSR-- 160
Query: 208 DDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQG 267
DR L G + ++ +K K +L CGAI G + +++ L +YG Y G+
Sbjct: 161 --DR-LKGHSHKKLVNFIHKHKTAKLIQASVVCGAICGNPDDVQLDRLAKYGLYAGVAFQ 217
Query: 268 IVSRRLGPTEEIEELKKLAFKLREVNS 294
I+ L + E+L K K+ E+N+
Sbjct: 218 IIDDYLDVVGDEEKLGKK--KVDEINN 242
>gi|91787628|ref|YP_548580.1| farnesyl-diphosphate synthase [Polaromonas sp. JS666]
gi|91696853|gb|ABE43682.1| farnesyl-diphosphate synthase [Polaromonas sp. JS666]
Length = 306
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 14/224 (6%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P + + MR+ V + P L +AACE V G+ E A+ +A A+ ++HA S +H+++P
Sbjct: 40 PAGLGDAMRYAVLDGGKRLRPLLVMAACEAVNGNAEAALRSACAVELIHAYSLVHDDMPC 99
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPA-GNNSGRILRVMVEM 184
D ++ + KPT++ F LL DA+ E L D R+ R++ +
Sbjct: 100 MD-NDVLRRGKPTVHVKFGEAQALLAGDALQALAFEFLTPDDGSVDAATQARLCRMLAQ- 157
Query: 185 TRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAIL 244
A G QG+ GQ +L +L +E ++ K G L G
Sbjct: 158 --AAGFQGMAGGQAIDLASVGLPLTSGQL---------HEMHRLKTGALLQASVMMGTAC 206
Query: 245 GGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
G LR YG VG+ +V L T + L K A K
Sbjct: 207 GAAPPAAQHALREYGAAVGLAFQVVDDILDVTADSATLGKTAGK 250
>gi|449017049|dbj|BAM80451.1| geranylgeranyl diphosphate synthase, chloroplast precursor
[Cyanidioschyzon merolae strain 10D]
Length = 388
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 7/218 (3%)
Query: 71 EPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTS 130
E MR+ + A + PAL +AAC + GG EQA+ A A+ ++H S IH++LP D
Sbjct: 123 EAMRYSLLAGGKRVRPALVLAACRMFGGVDEQAMPTAVAVEMVHTMSLIHDDLPAMDNDD 182
Query: 131 LIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGS 190
+ +PT + + +L DA+L +A R L V+ + +G
Sbjct: 183 F-RRGRPTNHKVYGEEVAILAGDALLSEAFSQIAEKTPATLVPPSRTLEVIRRLGNCVGL 241
Query: 191 QGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEK 250
G+ GQ +L+ D+ L + + + Y+T + A GAIL G S
Sbjct: 242 HGLAAGQALDLEAEGKPADEISLRMLETIHL-YKTAALLRFSITA-----GAILAGASVD 295
Query: 251 EIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
+I+ + + +G+ + L T E L K A K
Sbjct: 296 DIDCMESFANKIGLAFQVADDVLDVTATTETLGKTAGK 333
>gi|18977474|ref|NP_578831.1| bifunctional short chain isoprenyl diphosphate synthase [Pyrococcus
furiosus DSM 3638]
gi|397651605|ref|YP_006492186.1| bifunctional short chain isoprenyl diphosphate synthase [Pyrococcus
furiosus COM1]
gi|18893173|gb|AAL81226.1| bifunctional short chain isoprenyl diphosphate synthase [Pyrococcus
furiosus DSM 3638]
gi|393189196|gb|AFN03894.1| bifunctional short chain isoprenyl diphosphate synthase [Pyrococcus
furiosus COM1]
Length = 340
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
KEP +YE RH+ A + P + + A E VGG E+AI A A+ ++H S +H+++
Sbjct: 27 KEPKILYEAARHYPLAGGKRVRPFVVLTATEAVGGEWEKAIYPAVAIELIHNYSLVHDDI 86
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE 183
D T + +PT++ + N +L D + E ++ ++ P R+L +V+
Sbjct: 87 MDMDETR---RGRPTVHKVWGINMAILAGDLLFSKAFEAISRAEIPP-EKKARVLETVVK 142
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKK----KEGRLHACGAA 239
S + EGQ +L+ + D +T E Y + K G L A
Sbjct: 143 -----ASNELCEGQAMDLEFEKRDT------------VTIEEYMRMISGKTGALFDASAK 185
Query: 240 CGAILGGGSEKEIELLRRYGFYVGM 264
G I+G +E+ I L +G VG+
Sbjct: 186 VGGIVGTDNEEYINALSTWGRNVGI 210
>gi|392373426|ref|YP_003205259.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP
synthase) [Candidatus Methylomirabilis oxyfera]
gi|258591119|emb|CBE67414.1| Putative Geranyltranstransferase (Farnesyl-diphosphate synthase)
(FPP synthase) [Candidatus Methylomirabilis oxyfera]
Length = 312
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 124/266 (46%), Gaps = 29/266 (10%)
Query: 38 TPNKNKSYWTS----VHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAAC 93
TP + + Y V E + +L QA P E++E +R+ VFA + P L +AA
Sbjct: 2 TPEELRRYLDERRLLVDEALEQYLPQAS--DPPKEIHEAVRYSVFAGGKRLRPILILAAT 59
Query: 94 ELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVAD 153
E GG EQA+ AAAA+ ++H S IH++L + + + T + + +L D
Sbjct: 60 EAAGGQMEQALGAAAAIEMIHTYSLIHDDL-PAMDDDDYRRGRLTCHKVYGEAMAILAGD 118
Query: 154 AMLPFGLELLASSDNP----AGNNSGRI---------LRVMVEMTRAMGSQGVVEGQYNE 200
A+L LL++ + P A G + L V+ E+ A GS+G+V GQ +
Sbjct: 119 ALLTQAFILLSAENPPCPPLAKGGWGDLKGVYDSEARLMVIREIAEAAGSKGMVGGQVVD 178
Query: 201 LQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGF 260
+ +DR+++ T +TY ++ K G L G IL +++E L RYG
Sbjct: 179 ML-----QEDREIDLPT---LTY-LHEHKTGALIRVCLRVGGILASAGSEQMEALTRYGE 229
Query: 261 YVGMIQGIVSRRLGPTEEIEELKKLA 286
+G+ IV L +E L K A
Sbjct: 230 RIGLAFQIVDDILDLEGSLEVLGKQA 255
>gi|341581991|ref|YP_004762483.1| Bifunctional short chain isoprenyl diphosphate synthase
[Thermococcus sp. 4557]
gi|340809649|gb|AEK72806.1| Bifunctional short chain isoprenyl diphosphate synthase (idsA)
[Thermococcus sp. 4557]
Length = 343
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 111/239 (46%), Gaps = 27/239 (11%)
Query: 51 EDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAAL 110
+D+ A + + + KEP +Y+ RH+ A + P + + A E VGG +A+ AAA+
Sbjct: 16 KDVDAAIFELIPEKEPKNLYDASRHYPLAGGKRVRPFVVLRAAEAVGGDPRKALYPAAAV 75
Query: 111 HVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD-NP 169
+H S +H+++ D + + +PT++ + N +L D + E +A ++ +P
Sbjct: 76 EFIHNYSLVHDDIMDMDE---LRRGRPTVHKLWGVNMAILAGDLLFSKAFEAIAKAEVSP 132
Query: 170 AGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKK- 228
RIL V+V S + EGQ +++ D E+T E Y K
Sbjct: 133 --EKKARILDVLVRT-----SNMLCEGQALDIEFETRD------------EVTVEEYLKM 173
Query: 229 ---KEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
K G L A GAI+G +E+ I+ L ++G VG+ I L + E+L K
Sbjct: 174 ISGKTGALFEGSAEIGAIVGTDNEEYIKALAKWGMNVGIAFQIWDDVLDLIADEEKLGK 232
>gi|170744677|ref|YP_001773332.1| polyprenyl synthetase [Methylobacterium sp. 4-46]
gi|168198951|gb|ACA20898.1| Polyprenyl synthetase [Methylobacterium sp. 4-46]
Length = 290
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 10/202 (4%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + + MRH V + P L + L+GG A+ A + ++H S +H++
Sbjct: 18 ITRPPRLMQAMRHAVLGGGKRLRPFLTIETARLLGGPYPGALAAGGGIELVHCYSLVHDD 77
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGN-NSGRILRVM 181
LP D L + KPT++ AF T +L DA+L ELLA +PA ++G ++
Sbjct: 78 LPAMDDDDL-RRGKPTVHKAFDEATAILAGDALLTLAFELLA---DPAWQPDAGIRADLV 133
Query: 182 VEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACG 241
+ + RA G G+V GQ +L + R DV+ T + K G L A G
Sbjct: 134 LGLARAAGLGGMVGGQLLDLGA-----EGRFGEAALDVDATLQLQAMKTGALLAVSVEAG 188
Query: 242 AILGGGSEKEIELLRRYGFYVG 263
AI+GG ++ L YG +G
Sbjct: 189 AIVGGADAEQRAALLAYGRALG 210
>gi|384261858|ref|YP_005417044.1| Farnesyl-diphosphate synthase [Rhodospirillum photometricum DSM
122]
gi|378402958|emb|CCG08074.1| Farnesyl-diphosphate synthase [Rhodospirillum photometricum DSM
122]
Length = 319
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 116/264 (43%), Gaps = 14/264 (5%)
Query: 29 PMMVTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVE--VYEPMRHFVFAAPVNMAP 86
P +T T ++ K + + + HL + E V MR+ + P
Sbjct: 11 PFFMTREARTVSRLKDTMAAEAKAVNEHLDSLMPTSGDPEDRVVAAMRYASLDGGKRLRP 70
Query: 87 ALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPN 146
L + + +L R A+ AAA+ ++H S +H++LP D L + +PT + A+
Sbjct: 71 FLVLQSAQLFTVGRSCALNVAAAIEMVHCYSLVHDDLPAMDNDDL-RRGRPTTHRAYDEA 129
Query: 147 TELLVADAMLPFGLELLASSDNPAGNNSGRILR--VMVEMTRAMGSQGVVEGQYNELQCS 204
T +L DA+L E+LA + G ++ +R +++E+ A G++G+V GQ +L
Sbjct: 130 TAILAGDALLTKAFEVLALT----GTHADPQVRADLVLELALASGARGMVGGQMIDLMAE 185
Query: 205 QCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
+ LNG+ DV + K GRL + GAILG + L Y +G+
Sbjct: 186 RG-----LLNGVQDVAAITRMHTMKTGRLISFSCVAGAILGKAPRPLRQALAAYAHDLGL 240
Query: 265 IQGIVSRRLGPTEEIEELKKLAFK 288
I L + + L K A K
Sbjct: 241 AFQIADDLLDVEGDTQTLGKTAGK 264
>gi|87307782|ref|ZP_01089925.1| geranylgeranyl pyrophosphate synthetase (precursor)
[Blastopirellula marina DSM 3645]
gi|87289396|gb|EAQ81287.1| geranylgeranyl pyrophosphate synthetase (precursor)
[Blastopirellula marina DSM 3645]
Length = 298
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 18/206 (8%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P + E +R+ + A + P L + A E G R QA+ +A A+ ++HA S IH++LP
Sbjct: 35 PDRLQEAIRYSLLAPGKRLRPLLTLMAAETCGSDRTQAMPSACAVEMIHAYSLIHDDLPA 94
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLAS--SDNPAGNNSGRILRVMVE 183
D L + +PT + AF T +L DA+L LE++A D S R E
Sbjct: 95 MDDDDL-RRGRPTCHKAFDEATAILAGDALLARALEIVADGYQDPLVAARSCR------E 147
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAI 243
+ +A G+ +V GQ ++L + G DVEM +++K G + GAI
Sbjct: 148 LAKAAGATALVGGQADDLN---------EQFGSGDVEMLKAIHRRKTGAMICVSLRLGAI 198
Query: 244 LGGGSEKEIELLRRYGFYVGMIQGIV 269
G ++++ L YG +G+ IV
Sbjct: 199 AAGADDQQVAQLNLYGEQIGLAFQIV 224
>gi|194016844|ref|ZP_03055457.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Bacillus pumilus ATCC 7061]
gi|194011450|gb|EDW21019.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Bacillus pumilus ATCC 7061]
Length = 296
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 100/199 (50%), Gaps = 11/199 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++ M + + A + P L +A G + E I A+ ++H S IH++LP
Sbjct: 30 PEDLKSSMLYSLKAGGKRLRPVLVLALLNAYGKNEEDGIPVGCAVEMIHTYSLIHDDLPC 89
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D L + KPT + + T +L DA+L L+ +S + ++ + LR++ E+
Sbjct: 90 MDDDDL-RRGKPTNHKVYGEATAVLAGDALLTESFRLI-TSQLSSSVSADKKLRIVDELV 147
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
++ G+ G+V GQ+++++ Q +L I + +K G+L A GA+L
Sbjct: 148 KSAGALGMVGGQFDDMEAEQKQVSLAELESI---------HARKTGKLLTFSVAAGAMLA 198
Query: 246 GGSEKEIELLRRYGFYVGM 264
G S+ +IE LR + +++G+
Sbjct: 199 GASDDDIEKLREFSYHIGI 217
>gi|288574875|ref|ZP_06393232.1| Polyprenyl synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288570616|gb|EFC92173.1| Polyprenyl synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 300
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 11/219 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P +++ M + + + P LC+AA EL+GG + + A AL ++H AS IH++LP
Sbjct: 34 PPRMWDAMVYSLKVGGKRLRPVLCMAAAELLGGRSDLVLPMALALEMVHTASLIHDDLPA 93
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D ++ + +PT + + +L DA+L E L ++ P+ G +++ +
Sbjct: 94 MD-DDVLRRGQPTNHVVYGEALAILAGDALLCQAFE-LPLTELPSEIPRGNVVKAVAHFA 151
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
R++G G+ GQ +++ + E K L GAIL
Sbjct: 152 RSIGPGGICGGQVLDMESEGS---------EEECSSPTEISTLKTAALIRTSLITGAILS 202
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
GGS +++E L YG +G+ I L + EEL K
Sbjct: 203 GGSAEDLEALESYGLELGVAFQIADDILDVKGDQEELGK 241
>gi|333023207|ref|ZP_08451271.1| putative polyprenyl diphosphate synthase [Streptomyces sp. Tu6071]
gi|332743059|gb|EGJ73500.1| putative polyprenyl diphosphate synthase [Streptomyces sp. Tu6071]
Length = 377
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 19/202 (9%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
PAL + + E+ G + A A+ ++H S +H++L D + + T++ P
Sbjct: 87 PALALISAEVTGASAGTGVPGAVAVELVHNFSLLHDDLMDGDEQR---RHRDTVWKVHGP 143
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
+LV DA+ E+L P +GR R + TRA+ ++GQ ++
Sbjct: 144 AQAILVGDALFALANEILLELGTP---EAGRATRRLTRATRAL-----IDGQAQDISYEH 195
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
D VE E K G L AC A+ GA+LGG E + L RYG+++G+
Sbjct: 196 RDR--------VTVEECLEMEGNKTGALLACAASIGAVLGGADEATADTLERYGYHLGLA 247
Query: 266 QGIVSRRLGPTEEIEELKKLAF 287
V LG + E K +
Sbjct: 248 FQAVDDLLGIWGDPESTGKQTW 269
>gi|315646331|ref|ZP_07899451.1| Polyprenyl synthetase [Paenibacillus vortex V453]
gi|315278530|gb|EFU41846.1| Polyprenyl synthetase [Paenibacillus vortex V453]
Length = 301
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 95/201 (47%), Gaps = 10/201 (4%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
K P +++ M + + A M P L +AACE GG R+ AI A A+ ++H S +H++L
Sbjct: 31 KVPETLHKSMSYSLMAGGKRMRPLLVIAACEAGGGSRDAAIPVACAVEMVHTYSLVHDDL 90
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE 183
+ + KPT + F + +L DA+L + + G + R+L ++ +
Sbjct: 91 -PAMDDDDYRRGKPTNHKVFGEASAILAGDALLTHAFYSIIQASRQFGVPAERVLSIVED 149
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAI 243
+ G +G+V GQ +++ Q G+T +E + K L G
Sbjct: 150 LAEYAGPRGMVGGQVADMEGEQ---------GLTTLEQLEYIHLHKTSDLIMFSLMAGGH 200
Query: 244 LGGGSEKEIELLRRYGFYVGM 264
+ G +E +IE LR +G ++G+
Sbjct: 201 IAGCTEAQIESLRIFGHHIGL 221
>gi|49476181|ref|YP_034222.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
henselae str. Houston-1]
gi|49238989|emb|CAF28289.1| Geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
henselae str. Houston-1]
Length = 300
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 106/226 (46%), Gaps = 12/226 (5%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + + MR+ V + P L + +C L E ++ A+AL +H S IH++
Sbjct: 32 IARPEILLKAMRYGVLNGGKRLRPFLVIQSCALFDIPIEYSLNVASALECIHCYSLIHDD 91
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D +L + +PT++ AF T +L +A+L F E++A + + RI R++
Sbjct: 92 LPAMDNDTL-RRGQPTVHIAFDEATAILAGNALLTFAFEIIAHKTSELSFET-RI-RLIT 148
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+ +A G G++ GQ +L+ + + + + + + K L + GA
Sbjct: 149 ALAQASGLGGMIGGQMLDLEAEKKPQESKDITTLQHM---------KTATLISFACQAGA 199
Query: 243 ILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
I+G S++ E L +G Y+G+ + L T + L K A K
Sbjct: 200 IIGNASQELTEKLAAFGTYLGLAFQLTDDLLDVTASTKVLGKTAGK 245
>gi|374628593|ref|ZP_09700978.1| geranylgeranyl-diphosphate synthase [Methanoplanus limicola DSM
2279]
gi|373906706|gb|EHQ34810.1| geranylgeranyl-diphosphate synthase [Methanoplanus limicola DSM
2279]
Length = 321
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 112/233 (48%), Gaps = 29/233 (12%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIV-AAAALHVMHAASFIHENLP 124
P ++ + H + A + PA+ + A +LV R I+ AA AL V H + +H+++
Sbjct: 26 PTQLGKASSHLLLAGGKRLRPAVTLLAADLVSKGRSLDILPAALALEVTHTFTLVHDDIM 85
Query: 125 LSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASS--DNPAGNNSGRIL-RVM 181
D + + PT++ + T +L D + EL+ +S DN A +S IL R
Sbjct: 86 DGDS---VRRGAPTVHVKWDEPTAILAGDVLYAEAFELITNSLADNLAKVHSVAILARTC 142
Query: 182 VEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACG 241
VE + +GQ+ ++ DD ++ ++M KK G+L+A A+ G
Sbjct: 143 VE---------ICQGQHEDMSFENRDD----VDSFEYIDMV----GKKTGKLYAAAASIG 185
Query: 242 AILGGGSEKEIELLRRYGFYVGM---IQGIVSRRLGPTEEIEELKKLAFKLRE 291
A L GG++KE+ L +G++ G+ IQ + +G TE+ K A LRE
Sbjct: 186 ATLAGGNKKEVSALYDWGYHSGIAFQIQDDLIDFMGETEKTG--KDRASDLRE 236
>gi|431794334|ref|YP_007221239.1| geranylgeranyl pyrophosphate synthase [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430784560|gb|AGA69843.1| geranylgeranyl pyrophosphate synthase [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 289
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 109/220 (49%), Gaps = 17/220 (7%)
Query: 50 HEDIGAHLRQ-----AVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAI 104
+D+ AH+RQ A + + E M + + A + P L +AA + VGG E +
Sbjct: 3 QKDLEAHVRQVDSYLAQLFSGNGILIESMNYSLAAGGKRIRPVLALAAAKAVGGDEESIL 62
Query: 105 VAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA 164
AA AL ++H S IH++LP D + + + + AF +L DA+L + ELLA
Sbjct: 63 PAACALELIHTYSLIHDDLPAMDNDD-YRRGRLSNHKAFGVGQAILAGDALLTYAFELLA 121
Query: 165 SSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYE 224
S G R LRV+ E+ +A G +G+V GQ +L + D + ++E
Sbjct: 122 QS--ITGVTPERQLRVIREVAQAAGPEGMVGGQVLDLAAEEKD------LALAELE---R 170
Query: 225 TYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
++ K G + A GAIL GG+E++IE L Y +G+
Sbjct: 171 VHRLKTGAMLVVSARLGAILAGGTEEKIEALTNYAQAIGL 210
>gi|222528996|ref|YP_002572878.1| polyprenyl synthetase [Caldicellulosiruptor bescii DSM 6725]
gi|222455843|gb|ACM60105.1| Polyprenyl synthetase [Caldicellulosiruptor bescii DSM 6725]
Length = 299
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 13/212 (6%)
Query: 56 HLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHR---EQAIVAAAALHV 112
+L + + + P +Y+ MR+ VFA + P LC+ + ++V + E+ + A+A+ +
Sbjct: 20 NLEKILKERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMVSKDQIVDEKILDIASAIEL 79
Query: 113 MHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGN 172
+H S IH++LP D ++ + KPT + F +L DA+L E+ G
Sbjct: 80 IHTYSLIHDDLPAMD-NDVLRRGKPTNHVVFGEAIAILAGDALLNLAAEVCMDWILRYGC 138
Query: 173 NSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGR 232
+ +++ + A G +G++ GQ ++ S D I E+ +E + KK R
Sbjct: 139 DKN-LVKAAKYLFWASGVEGMIGGQVIDITNSGQD--------IKSEELLFEMHLKKTSR 189
Query: 233 LHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
L CGA++ + + L YG +G+
Sbjct: 190 LIQASCVCGALVAAAEDDVVSDLEEYGKNLGL 221
>gi|189218412|ref|YP_001939053.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum
V4]
gi|189185270|gb|ACD82455.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum
V4]
Length = 300
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 121/257 (47%), Gaps = 14/257 (5%)
Query: 34 MAMSTPNKNKSYWTSVHEDIGAHLRQAVV--VKEPVEVYEPMRHFVFAAPVNMAPALCVA 91
M + P + ++Y + + + LR+ V K+P ++E + + +F+ + P LC+A
Sbjct: 1 MIVHKPMEIENYIFEQQQVVESALRKFVTGKAKKPRILHEAIDYCLFSGGKRLRPILCLA 60
Query: 92 ACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLV 151
V + + A+ A A+ +H S +H++LP D + KP+++ + +L
Sbjct: 61 GAHAVCRNSDCALPMACAVECIHTYSLVHDDLPSMDNDDF-RRGKPSLHKIYGEALAILT 119
Query: 152 ADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDR 211
DA+L E +AS +P G + +++ E+ R GS+ +V GQ +L+ +
Sbjct: 120 GDALLALAFE-VASLCSPLGRTYP-VSQMIWELARTAGSRALVAGQVADLEA------EG 171
Query: 212 KLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSR 271
K G+T + + +K L GA+ +K ++L+ RYG +G+ I+
Sbjct: 172 KEIGLTQLRY---IHCRKTAALITTSLRLGAMAADADKKTLDLITRYGRALGLAFQIIDD 228
Query: 272 RLGPTEEIEELKKLAFK 288
L T+ E L K A K
Sbjct: 229 ILDVTQTTEILGKSAGK 245
>gi|14590908|ref|NP_142981.1| geranylgeranyl pyrophosphate synthetase [Pyrococcus horikoshii OT3]
gi|90108478|pdb|1WY0|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate
Synthetase From Pyrococcus Horikoshii Ot3
gi|3257488|dbj|BAA30171.1| 342aa long hypothetical geranylgeranyl pyrophosphate synthetase
[Pyrococcus horikoshii OT3]
Length = 342
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 17/201 (8%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
K+P +YE RH+ A + P + + + E VGG +AI A A+ ++H S +H+++
Sbjct: 29 KDPRVLYEAARHYPLAGGKRVRPFVVLTSTEAVGGDPLRAIYPAVAIELIHNYSLVHDDI 88
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE 183
D T + KPT++ + N +L D + E +A ++ P R+L V+V+
Sbjct: 89 MDMDETR---RGKPTVHRIWGVNMAILAGDLLFSKAFEAVARAEIPP-EKKARVLEVIVK 144
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAI 243
S + EGQ +L+ + +E E K G L A G I
Sbjct: 145 -----ASNELCEGQARDLEFEK--------KSTVTIEEYMEMISGKTGALFEASAKVGGI 191
Query: 244 LGGGSEKEIELLRRYGFYVGM 264
+G +E+ I+ L +G VG+
Sbjct: 192 IGTDNEEYIKALSSWGRNVGI 212
>gi|329924775|ref|ZP_08279764.1| geranyltranstransferase [Paenibacillus sp. HGF5]
gi|328940440|gb|EGG36763.1| geranyltranstransferase [Paenibacillus sp. HGF5]
Length = 304
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 10/201 (4%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
K P + M + + A M P L +AACE GG RE A+ A A+ ++H S IH++L
Sbjct: 34 KVPETLSRSMSYSLMAGGKRMRPLLVIAACEAGGGSREAAVPVACAVEMVHTYSLIHDDL 93
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE 183
P + KPT + F + +L DA+L + + G + R+L ++ +
Sbjct: 94 PAM-DDDDYRRGKPTNHKVFGEASAILAGDALLTHAFYSVIQAARKHGVPAERVLSIVED 152
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAI 243
+ G +G+V GQ +++ Q GIT +E + K L G
Sbjct: 153 LAEYAGPRGMVGGQVADMEGEQ---------GITTLEQLEYIHLHKTSDLIMFSLMAGGH 203
Query: 244 LGGGSEKEIELLRRYGFYVGM 264
+ G S+ +IE LR +G ++G+
Sbjct: 204 VAGCSDAQIESLRTFGHHIGL 224
>gi|389571717|ref|ZP_10161806.1| geranyltranstransferase [Bacillus sp. M 2-6]
gi|388428611|gb|EIL86407.1| geranyltranstransferase [Bacillus sp. M 2-6]
Length = 296
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P E+ M + + A + P L +A G E I A+ ++H S IH++LP
Sbjct: 30 PEELKSSMLYSLKAGGKRLRPVLVLALLNAYGKREEDGIPVGCAVEMIHTYSLIHDDLPC 89
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA---SSDNPAGNNSGRILRVMV 182
D L + KPT + + T +L DA+L L+ S D PA LR++
Sbjct: 90 MDDDDL-RRGKPTNHKVYGEATAVLAGDALLTESFRLITSQLSDDVPADQK----LRIID 144
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
E+ + G+ G+V GQ+++++ Q +L I + +K G+L GA
Sbjct: 145 ELVTSAGALGMVGGQFDDMEAEQKQIPLSELESI---------HARKTGKLLTFSVVAGA 195
Query: 243 ILGGGSEKEIELLRRYGFYVGM 264
IL G + EIE LR + +++G+
Sbjct: 196 ILAGAPDDEIEKLREFSYHIGI 217
>gi|282889795|ref|ZP_06298334.1| hypothetical protein pah_c004o183 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281500369|gb|EFB42649.1| hypothetical protein pah_c004o183 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 305
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 96/208 (46%), Gaps = 13/208 (6%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
+++ R+ + + P L +A + + G QAI A AL ++H S +H++LP D
Sbjct: 43 LFDAARYSLLGGGKRIRPLLSLAVTQALTGTFTQAIQPACALELIHTYSLVHDDLPSMDN 102
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
+ KP+++ F +L D +L + E+L SS G + +I+ ++ + ++
Sbjct: 103 DDF-RRGKPSLHKVFPEGHAILTGDFLLTYAFEVLCSS---PGLTAQQIVELVALLAKSA 158
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
G G++ GQ D +N ++ ++ K G L C GAI+ G +
Sbjct: 159 GGHGMIAGQIM---------DISAVNQTLTLDNLQHIHQTKTGALITCAVEFGAIVSGCA 209
Query: 249 EKEIELLRRYGFYVGMIQGIVSRRLGPT 276
E LL+++G +G+ I+ L T
Sbjct: 210 PVERALLQQFGNEIGLAFQIIDDVLDIT 237
>gi|338175922|ref|YP_004652732.1| geranylgeranyl pyrophosphate synthase [Parachlamydia acanthamoebae
UV-7]
gi|336480280|emb|CCB86878.1| geranylgeranyl pyrophosphate synthase,chloroplastic [Parachlamydia
acanthamoebae UV-7]
Length = 305
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 96/208 (46%), Gaps = 13/208 (6%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
+++ R+ + + P L +A + + G QAI A AL ++H S +H++LP D
Sbjct: 43 LFDAARYSLLGGGKRIRPLLSLAVIQALTGTFTQAIQPACALELIHTYSLVHDDLPSMDN 102
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
+ KP+++ F +L D +L + E+L SS G + +I+ ++ + ++
Sbjct: 103 DDF-RRGKPSLHKVFPEGHAILTGDFLLTYAFEVLCSS---PGLTAQQIVELVALLAKSA 158
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
G G++ GQ D +N ++ ++ K G L C GAI+ G +
Sbjct: 159 GGHGMIAGQIM---------DISAVNQTLTLDNLQHIHQTKTGALITCAVEFGAIVSGCA 209
Query: 249 EKEIELLRRYGFYVGMIQGIVSRRLGPT 276
E LL+++G +G+ I+ L T
Sbjct: 210 PVERALLQQFGNEIGLAFQIIDDVLDIT 237
>gi|206889920|ref|YP_002248053.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps)
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741858|gb|ACI20915.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps)
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 295
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P +++ + + + A + P LC+A+ E G E + A A+ +H S IH++LP
Sbjct: 30 PPILHDSVLYSLTAGGKRLRPILCIASYEACDG-MENIVPYATAIEFIHTYSLIHDDLPA 88
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D L + KPT + F +L D +L +L++ D A +S +L+V+ E++
Sbjct: 89 MDNDDL-RRGKPTNHKVFGEGIAILAGDGLLTEAFTILSNKDY-ANISSNTLLKVISEIS 146
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
+A G +G+V GQ +L + D+R + I + K + GAIL
Sbjct: 147 KAAGLRGMVAGQAYDLISEGKEPDERVVEFI---------HLYKTAAMIKASVKVGAILA 197
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRL---GPTE 277
SE++I+ L YG +G+ IV L G TE
Sbjct: 198 EASEEKIKNLEIYGQSIGLAFQIVDDILDIEGTTE 232
>gi|395779097|ref|ZP_10459601.1| hypothetical protein MCU_01302 [Bartonella elizabethae Re6043vi]
gi|423714603|ref|ZP_17688827.1| hypothetical protein MEE_00028 [Bartonella elizabethae F9251]
gi|395416425|gb|EJF82801.1| hypothetical protein MCU_01302 [Bartonella elizabethae Re6043vi]
gi|395431381|gb|EJF97400.1| hypothetical protein MEE_00028 [Bartonella elizabethae F9251]
Length = 300
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 108/226 (47%), Gaps = 12/226 (5%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + + MR+ V + P L + + L E ++ A AL +H S IH++
Sbjct: 32 ISRPENLIKAMRYGVLNGGKRLRPFLVIQSAALFDIPVEHSLDVACALECVHCYSLIHDD 91
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D ++ + KPT++ F T +L +A+L F E++A N A + RI +++
Sbjct: 92 LPAMDN-DILRRGKPTVHIEFDEATAILAGNALLTFAFEIIAHKAN-ALSTEIRI-KLIT 148
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+ +A G G++ GQ +++ +++ TD+ +T + K AC A GA
Sbjct: 149 ALAQASGLGGMIGGQMLDIEA------EKRSQESTDI-ITLQRMKTASLISFACQA--GA 199
Query: 243 ILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
I+G SE+ + L +G Y+G+ + L T + L K A K
Sbjct: 200 IIGNASEELLTKLTAFGTYLGLAFQLTDDLLDVTANTQTLGKTAGK 245
>gi|384097016|ref|ZP_09998137.1| geranyltranstransferase [Imtechella halotolerans K1]
gi|383836984|gb|EID76384.1| geranyltranstransferase [Imtechella halotolerans K1]
Length = 324
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 29/214 (13%)
Query: 56 HLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHA 115
HL + KEP +YEP+ + + + P L + + ++ GG E+A+ AA A+ V H
Sbjct: 14 HLSSKISQKEPRNLYEPIEYILQLGGKRLRPILSLMSADIFGGQSEKALDAALAIEVFHN 73
Query: 116 ASFIHENL----PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAG 171
S +H+++ PL + KPT++ + NT +L DAML +LL S +
Sbjct: 74 FSLVHDDIMDGAPLR-------RGKPTVHEKWDINTGILSGDAMLIMAYQLLESYEADTF 126
Query: 172 NNSGRIL-RVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKE 230
++ + +E V EGQ Q D D +T E + K K
Sbjct: 127 AQLSKLFSKTAIE---------VCEGQ-------QYDVDFESRTDVTIAEYL-QMIKYKT 169
Query: 231 GRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
L A GAI+ G S+K E + +G +G+
Sbjct: 170 AVLVAAALKMGAIIAGTSKKNQEAIYNFGLNLGI 203
>gi|392390239|ref|YP_006426842.1| geranylgeranyl pyrophosphate synthase [Ornithobacterium
rhinotracheale DSM 15997]
gi|390521317|gb|AFL97048.1| geranylgeranyl pyrophosphate synthase [Ornithobacterium
rhinotracheale DSM 15997]
Length = 323
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 100/219 (45%), Gaps = 27/219 (12%)
Query: 50 HEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAA 109
E I L Q ++K+P +YEPM + + + P LC+ CEL GG +A+ + A
Sbjct: 8 QELIQQALTQNSLIKQPEALYEPMEYILQLGGKRLRPTLCLMGCELFGGDINEALKPSLA 67
Query: 110 LHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNP 169
+ H + +H+++ + D + I + K T++ + NT LL DA++ +L
Sbjct: 68 MEYFHNFTLMHDDI-MDD--APIRRGKATVHEKYDINTALLSGDALMIKSYQLFN----- 119
Query: 170 AGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKK- 228
E+ + + V ++++ C+ +N E+++ Y+K
Sbjct: 120 -------------ELKPEVFKKVVT--HFSQMAIELCEGQQYDMNFENQKEVSFAEYEKM 164
Query: 229 ---KEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
K G L AC GA++ G SE++ L +G Y+G+
Sbjct: 165 ITGKTGVLTACALKVGAMIAGASEEDANHLYDFGKYLGI 203
>gi|115379699|ref|ZP_01466777.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps)
[Stigmatella aurantiaca DW4/3-1]
gi|310821402|ref|YP_003953760.1| geranylgeranyl diphosphate synthase [Stigmatella aurantiaca
DW4/3-1]
gi|115363289|gb|EAU62446.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps)
[Stigmatella aurantiaca DW4/3-1]
gi|309394474|gb|ADO71933.1| Geranylgeranyl diphosphate synthase [Stigmatella aurantiaca
DW4/3-1]
Length = 312
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 21/216 (9%)
Query: 56 HLRQAVVVKEPVEVYEP--------MRHFVFAAPVNMAPALCVAACELVGGHREQAIVAA 107
H RQ +V + E + P +R + A + P LC+ ACE VGG + A+ AA
Sbjct: 24 HERQQLVARALDEHFPPGAGHLTAAIREALLADGKRLRPILCLEACEWVGGSVKAALPAA 83
Query: 108 AALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD 167
AL ++H + +H++LP D +P ++ +L DA+L LLAS+
Sbjct: 84 CALEMIHKMTLVHDDLPAMDDAE-TRNGRPALHKVHGEALAILAGDALLVHAFGLLASTR 142
Query: 168 NPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYK 227
G + R+ + + +A+G+ G+ GQ ++ SQ + G+T ++ + +
Sbjct: 143 ---GVPAERVTVAIRRLCQALGTTGLAGGQALDV-LSQTE-------GVTPEKLDH-VHT 190
Query: 228 KKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVG 263
K GA +GG ++E L RYG +G
Sbjct: 191 WKTASFFEVAIVIGAEMGGADASQVEALARYGMLLG 226
>gi|406911096|gb|EKD50966.1| Polyprenyl synthetase [uncultured bacterium]
Length = 297
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 23/228 (10%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K++W + H H+R P E+ + M + +FA + P L A+ + + E
Sbjct: 21 KAHWINDH-----HIR-------PKELLDAMEYSLFAPGKRIRPVLVFASTQTLNMPEED 68
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
I A AL ++HA S IH++LP D L + +PT + F +L DA+L +
Sbjct: 69 VIPLAGALEMIHAFSLIHDDLPSMDNDDL-RRGRPTNHKVFGEALAILAGDALLSHAFTV 127
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
L+ D + I+ V+ +A G+ G++ GQ ++Q N I ++
Sbjct: 128 LSDLDTEKYPHEN-IIDVIHHFAKATGTCGMISGQVWDMQSE---------NRIISLDEL 177
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVS 270
++ K G L A+L G ++ L RY +G+ +V
Sbjct: 178 QNLHRHKTGALITLAVTSPAVLKGAEPDVMDCLIRYSEAIGLCFQVVD 225
>gi|409095148|ref|ZP_11215172.1| bifunctional short chain isoprenyl diphosphate synthase
[Thermococcus zilligii AN1]
Length = 343
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 112/240 (46%), Gaps = 25/240 (10%)
Query: 49 VHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAA 108
+ D+ + + V K+P +Y+ RH+ A + P + + A E VGG+ E+A+ AA
Sbjct: 14 ITRDVDRVILELVPEKDPKTLYDAARHYPLAGGKRVRPFVVLRAAEAVGGNPEEALYPAA 73
Query: 109 ALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDN 168
++ +H S +H+++ D + + +PT++ + N +L D + E +A + +
Sbjct: 74 SVEFIHNYSLVHDDIMDMDE---LRRGRPTVHRLWGVNMAILAGDLLFSKAFEAVARA-S 129
Query: 169 PAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKK 228
+ RIL V+V S + EGQ +++ + + E+T E Y +
Sbjct: 130 VSPEKKARILDVLVRT-----SNMLCEGQALDIEFEKRE------------EVTVEEYLR 172
Query: 229 ----KEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
K G L A GAI+G +E+ I+ L ++G VGM I L + E+L K
Sbjct: 173 MISGKTGALFQGSAEIGAIVGTDNEEYIQALSKWGMNVGMAFQIWDDVLDLIADEEKLGK 232
>gi|261405955|ref|YP_003242196.1| poluprenyl synthetase [Paenibacillus sp. Y412MC10]
gi|261282418|gb|ACX64389.1| Polyprenyl synthetase [Paenibacillus sp. Y412MC10]
Length = 307
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 10/201 (4%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
K P + M + + A M P L +AACE GG RE A+ A A+ ++H S IH++L
Sbjct: 37 KVPETLSRSMSYSLMAGGKRMRPLLVIAACEAGGGSREAAVPVACAVEMVHTYSLIHDDL 96
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE 183
P + KPT + F + +L DA+L + + G + R+L ++ +
Sbjct: 97 PAM-DDDDYRRGKPTNHKVFGEASAILAGDALLTHAFYSVIQAARKHGVPAERVLSIVED 155
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAI 243
+ G +G+V GQ +++ Q GIT +E + K L G
Sbjct: 156 LAVYAGPRGMVGGQVADMEGEQ---------GITTLEQLEYIHLHKTSDLIMFSLMAGGH 206
Query: 244 LGGGSEKEIELLRRYGFYVGM 264
+ G S+ +IE LR +G ++G+
Sbjct: 207 VAGCSDSQIESLRTFGHHIGL 227
>gi|337283762|ref|YP_004623236.1| bifunctional short chain isoprenyl diphosphate synthase [Pyrococcus
yayanosii CH1]
gi|334899696|gb|AEH23964.1| bifunctional short chain isoprenyl diphosphate synthase [Pyrococcus
yayanosii CH1]
Length = 341
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
KEP +YE RH+ A + P + + A E VGG +A+ A A+ ++H S +H+++
Sbjct: 28 KEPAVLYEAARHYPLAGGKRVRPFVVLTAAEAVGGDPSKALYPAVAIELIHNYSLVHDDI 87
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE 183
D T + +PT++ + N +L D + E ++ +D A RIL +V
Sbjct: 88 MDMDETR---RGRPTVHKLWGINMAILAGDLLFSKAFEAISGADVDA-EKKARILETIVR 143
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKK----KEGRLHACGAA 239
S + EGQ +L+ + + +T E Y + K G L A
Sbjct: 144 -----ASNELCEGQAMDLEFEKRET------------VTIEEYMRMISGKTGALFEAAAK 186
Query: 240 CGAILGGGSEKEIELLRRYGFYVGM 264
GAI+G +E+ I L R+G VG+
Sbjct: 187 VGAIVGTENEEYIGSLARWGRNVGI 211
>gi|295835546|ref|ZP_06822479.1| polyprenyl synthetase [Streptomyces sp. SPB74]
gi|197699439|gb|EDY46372.1| polyprenyl synthetase [Streptomyces sp. SPB74]
Length = 385
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 19/202 (9%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
PAL + + E+ G E + A A+ ++H S +H++L D + + T++ P
Sbjct: 96 PALALISAEVTGAGAETGVPGAVAVELVHNFSLLHDDLMDGDEQR---RHRDTVWKVHGP 152
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
+LV DA+ E+L +GR R + TRA+ ++GQ ++
Sbjct: 153 AQAILVGDALFALANEVLLELGT---AEAGRATRRLTRATRAL-----IDGQAQDISYEH 204
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
D VE E K G L AC A+ GA+LGG E + L RYG+++G+
Sbjct: 205 RDR--------VTVEECLEMEGNKTGALLACAASIGAVLGGADEATADTLERYGYHLGLA 256
Query: 266 QGIVSRRLGPTEEIEELKKLAF 287
V LG + E K +
Sbjct: 257 FQAVDDLLGIWGDPESTGKQTW 278
>gi|89148075|gb|ABC46867.3| geranylgeranyl diphosphate synthase [Stevia rebaudiana]
Length = 147
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 112 VMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAG 171
++H S +H++LP D + KPT + + +L DA+L E +A++ G
Sbjct: 1 MIHTMSLVHDDLPCVDNDDF-RRGKPTSHKVYGEEMAVLTGDALLSLSFEHIATA--TKG 57
Query: 172 NNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEG 231
+ RI+RV+ E+ R++GS+G+V GQ ++ D G+ +E + K
Sbjct: 58 VSKDRIVRVIGELARSVGSEGLVAGQVVDILSEGAD------VGLDHLEYIH---IHKTA 108
Query: 232 RLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIV 269
L GAI+GGGS+++IE LR++ +G++ +V
Sbjct: 109 MLLESSVVIGAIMGGGSDQQIEKLRKFARSIGLLFQVV 146
>gi|376297785|ref|YP_005169015.1| polyprenyl synthetase [Desulfovibrio desulfuricans ND132]
gi|323460347|gb|EGB16212.1| Polyprenyl synthetase [Desulfovibrio desulfuricans ND132]
Length = 297
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 108/227 (47%), Gaps = 21/227 (9%)
Query: 48 SVHEDIG--AHLRQAVVV------KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGH 99
+ ED+G A L +A +V P + M + + A + P L +A L+GG
Sbjct: 2 TFKEDLGRRAALVEAYLVGCLRDRNIPARLLASMEYSLLAGGKRLRPVLVLAWNGLLGGD 61
Query: 100 REQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFG 159
++A+ AA++ +H S IH++LP D L + +P+ + F T +L D +L
Sbjct: 62 ADKAMPFAASMECIHTYSLIHDDLPAMDDDDL-RRGRPSNHKQFDEATAILAGDGLLTEA 120
Query: 160 LELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDV 219
L+ + G + R+LR + + RA GS G+V GQ +++ L G T V
Sbjct: 121 FVLMTETCLVKGLPAERVLRAIAVLARAAGSGGMVGGQAVDME----------LTGRTGV 170
Query: 220 EMT--YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
+ + + K G L CGAIL G +E +++ RR+G +G+
Sbjct: 171 PLDELKKMHAMKTGALLTAACECGAILAGAAESDVDNARRFGRKIGV 217
>gi|291287805|ref|YP_003504621.1| polyprenyl synthetase [Denitrovibrio acetiphilus DSM 12809]
gi|290884965|gb|ADD68665.1| Polyprenyl synthetase [Denitrovibrio acetiphilus DSM 12809]
Length = 299
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 10/214 (4%)
Query: 71 EPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTS 130
+ MR+ +FA + PAL ++ + G+ ++A AAA+ ++H S IH++LP
Sbjct: 37 DAMRYSLFAGGKRLRPALVFSSYGVFEGYFDKATPFAAAVEMLHTYSLIHDDLPAM-DDD 95
Query: 131 LIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGS 190
+ KPT + + T +L D +L E++ +++ ++L ++ A G
Sbjct: 96 DYRRGKPTNHKMYGEATAILAGDGLLTKAFEVMCNAEINPDVEPAQMLEAAYKLADAAGD 155
Query: 191 QGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEK 250
+G+V GQ+ +++ +G+ + + K RL + GAILG GSE
Sbjct: 156 RGMVGGQFTDMEAE---------DGVFNSATVDFIHMNKTSRLISYCCELGAILGFGSED 206
Query: 251 EIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
+ + +R YG +G+ IV L EEL K
Sbjct: 207 DKKRMREYGIRIGLAFQIVDDILDIASTTEELGK 240
>gi|304436640|ref|ZP_07396609.1| geranyltranstransferase [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304370336|gb|EFM23992.1| geranyltranstransferase [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 291
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 109/246 (44%), Gaps = 19/246 (7%)
Query: 43 KSYWTS----VHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGG 98
K W + V + A L + V+ + + + M + + A + P L +AA + VGG
Sbjct: 2 KERWRARQEMVERALQAELDRTDVLDDTLR--QAMAYSLMAGGKRLRPVLLMAAADAVGG 59
Query: 99 HREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPF 158
+ + A AL ++H S IH++LP D + K T + F +L D +L
Sbjct: 60 DGAKFLSVACALEMIHTYSLIHDDLPAMDNDD-YRRGKLTNHKVFGDGIAILAGDGLLTL 118
Query: 159 GLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITD 218
++ + + + +LRV+ E++RA G++G+V GQ +L+ + + I+
Sbjct: 119 AFTVILRQQDVSADT---LLRVVDEISRAAGAEGMVGGQVLDLRAEE--------HRISM 167
Query: 219 VEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEE 278
EM + K G L GAILGG SE ++ L Y G+ I L
Sbjct: 168 EEMR-RVHMGKTGALFRAALRSGAILGGASEAQLASLTTYAEQFGLAFQITDDILDVVGT 226
Query: 279 IEELKK 284
E++ K
Sbjct: 227 AEDIGK 232
>gi|386350702|ref|YP_006048950.1| farnesyl-diphosphate synthase [Rhodospirillum rubrum F11]
gi|346719138|gb|AEO49153.1| farnesyl-diphosphate synthase [Rhodospirillum rubrum F11]
Length = 292
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 14/240 (5%)
Query: 53 IGAHLRQAVVVKEPVE--VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAAL 110
I HL Q + + E V + MR+ + P L + + +L R A+ AAA+
Sbjct: 8 INDHLSQLMPATDGPEGRVVDAMRYAALEGGKRLRPFLVLQSAQLFSVSRACALNVAAAI 67
Query: 111 HVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPA 170
++H S IH++LP D L + +PT++ + T +L DA+L E++A
Sbjct: 68 EMIHCYSLIHDDLPAMDNDDL-RRGRPTVHRQYDEPTAILAGDALLTKAFEVIALP---- 122
Query: 171 GNNSGRILR--VMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKK 228
G +S +R ++ E+ A G++G+V GQ +L + ++G DV ++
Sbjct: 123 GTHSDPAVRCDLVTELAIAAGAKGMVGGQMIDLMAERG-----LIDGALDVPAITRMHQL 177
Query: 229 KEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
K GRL + + GAILG + + L Y +G+ I L + L K A K
Sbjct: 178 KTGRLISFSSIAGAILGKAPRSQRQALFNYAHDLGLAFQIADDLLDVEGDTATLGKTAGK 237
>gi|83593950|ref|YP_427702.1| farnesyl-diphosphate synthase [Rhodospirillum rubrum ATCC 11170]
gi|83576864|gb|ABC23415.1| farnesyl-diphosphate synthase [Rhodospirillum rubrum ATCC 11170]
Length = 305
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 14/240 (5%)
Query: 53 IGAHLRQAVVVKEPVE--VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAAL 110
I HL Q + + E V + MR+ + P L + + +L R A+ AAA+
Sbjct: 21 INDHLSQLMPATDGPEGRVVDAMRYAALEGGKRLRPFLVLQSAQLFSVSRACALNVAAAI 80
Query: 111 HVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPA 170
++H S IH++LP D L + +PT++ + T +L DA+L E++A
Sbjct: 81 EMIHCYSLIHDDLPAMDNDDL-RRGRPTVHRQYDEPTAILAGDALLTKAFEVIALP---- 135
Query: 171 GNNSGRILR--VMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKK 228
G +S +R ++ E+ A G++G+V GQ +L + ++G DV ++
Sbjct: 136 GTHSDPAVRCDLVTELAIAAGAKGMVGGQMIDLMAERG-----LIDGALDVPAITRMHQL 190
Query: 229 KEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
K GRL + + GAILG + + L Y +G+ I L + L K A K
Sbjct: 191 KTGRLISFSSIAGAILGKAPRSQRQALFNYAHDLGLAFQIADDLLDVEGDTATLGKTAGK 250
>gi|325109156|ref|YP_004270224.1| polyprenyl synthetase [Planctomyces brasiliensis DSM 5305]
gi|324969424|gb|ADY60202.1| Polyprenyl synthetase [Planctomyces brasiliensis DSM 5305]
Length = 314
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 110/238 (46%), Gaps = 31/238 (13%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P + E R+ + A + P L + + + G E + AA A+ ++H S IH++LP
Sbjct: 30 PDRLSEASRYSLLAGGKRLRPLLVLLSAQACSGKPEPGLPAALAIEMVHTYSLIHDDLPA 89
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD-NPAGNNSGRILRVMVEM 184
D L + +PT + F T +L D +L E LA+ +PA +R ++E+
Sbjct: 90 MDDDDL-RRGRPTCHRQFDEATAILAGDGLLTRAFETLAAGIVDPA-----TAVRCVLEL 143
Query: 185 TRAMGSQGVVEGQYNELQCSQCDDDDRKLNGI------------------TDVEMTYETY 226
+RA G +G+V GQ +L D +++ I +++ +
Sbjct: 144 SRASGVEGMVGGQQADL------DAEKRFEQIESKSSEETAENPAEPSDEAELQQLKAIH 197
Query: 227 KKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
++K G+L C GAILGG + +++ + RYG +G+ ++ L T +E + K
Sbjct: 198 RRKTGKLITCAVRMGAILGGADDAQLDAITRYGDAIGLAFQVMDDILDCTSTVEAMGK 255
>gi|374296391|ref|YP_005046582.1| geranylgeranyl pyrophosphate synthase [Clostridium clariflavum DSM
19732]
gi|359825885|gb|AEV68658.1| geranylgeranyl pyrophosphate synthase [Clostridium clariflavum DSM
19732]
Length = 296
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 108/239 (45%), Gaps = 13/239 (5%)
Query: 49 VHEDI-GAHLRQAVVVKEPVE--VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIV 105
+++DI L + + K+ +E +Y MR+ + A + P L +A C+++GG ++ +
Sbjct: 9 IYQDIVNNFLEECIKEKDLMEKSIYNAMRYSLLAGGKRLRPVLSLAVCDMLGGDLKEVLP 68
Query: 106 AAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLAS 165
A A+ ++H S IH++LP D + K T + F +L D +L EL+
Sbjct: 69 YACAVEMIHTYSLIHDDLPSMDNDDY-RRGKLTNHKVFGEALAILAGDGLLNMAFELMLE 127
Query: 166 SDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYET 225
+ + NN ++ M + ++ G +G++ GQ +++ N VE
Sbjct: 128 NTSSNCNNIENKVKAMGYIAKSSGVRGMIGGQVVDIESE---------NNEVSVETLEYM 178
Query: 226 YKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
++ K G L AI+ S ++I+ L Y +G+ I L I++L K
Sbjct: 179 HRLKTGALIKASVISAAIICNASNEDIQNLENYAEGIGLAFQIKDDILDVEGNIDKLGK 237
>gi|422343993|ref|ZP_16424920.1| hypothetical protein HMPREF9432_00980 [Selenomonas noxia F0398]
gi|355377741|gb|EHG24950.1| hypothetical protein HMPREF9432_00980 [Selenomonas noxia F0398]
Length = 291
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 109/245 (44%), Gaps = 17/245 (6%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVE--VYEPMRHFVFAAPVNMAPALCVAACELVGGHR 100
K W + E I LR + + ++ + E M + + A + P L +AA + VG
Sbjct: 2 KELWRNRQELIERALRDELAKTDILDNTLREAMEYSLMAGGKRLRPILLMAAADAVGADG 61
Query: 101 EQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGL 160
+ + AA AL ++H S IH++LP D + K T + + +L DA+L
Sbjct: 62 TKLLTAACALEMIHTYSLIHDDLPAMDNDD-YRRGKLTNHKVYGDGIAILAGDALLTLAF 120
Query: 161 E-LLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDV 219
LL D PA + +LRV+ ++RA G++G+V GQ +LQ N +
Sbjct: 121 TVLLRQKDVPAAS----LLRVVDVISRAAGAEGMVGGQVLDLQAE---------NKAISL 167
Query: 220 EMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEI 279
+ + K G L GAILGG SE+++ L Y + G+ I L
Sbjct: 168 DELRRVHMGKTGALFHAALRSGAILGGASEQQLAALTAYADHFGLAFQITDDILDVVGNA 227
Query: 280 EELKK 284
E++ K
Sbjct: 228 EDIGK 232
>gi|187779512|ref|ZP_02995985.1| hypothetical protein CLOSPO_03108 [Clostridium sporogenes ATCC
15579]
gi|187773137|gb|EDU36939.1| polyprenyl synthetase [Clostridium sporogenes ATCC 15579]
Length = 290
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 94/197 (47%), Gaps = 13/197 (6%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
++YE M + + A + P L + L ++A+ AAA+ ++H S IH++LP D
Sbjct: 28 KIYEAMAYSLEAGGKRIRPVLLLNTYALYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMD 87
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
L + KPT + F +L DA+L + ++ G N+ L+ + +A
Sbjct: 88 NDDL-RRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLKNGENA---LKACYTIAKA 143
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G G++ GQ ++ +D+ ++ ++ Y +KKK G L GAILG
Sbjct: 144 AGVDGMIGGQVVDILS-----EDKSIS----LDELYYMHKKKTGALIKASILAGAILGSA 194
Query: 248 SEKEIELLRRYGFYVGM 264
+ +IELL YG +G+
Sbjct: 195 TSTDIELLGEYGDNLGL 211
>gi|452751056|ref|ZP_21950802.1| Octaprenyl-diphosphate synthase [alpha proteobacterium JLT2015]
gi|451961206|gb|EMD83616.1| Octaprenyl-diphosphate synthase [alpha proteobacterium JLT2015]
Length = 298
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 97/221 (43%), Gaps = 14/221 (6%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
+ E MR+ M P LCVAAC+L +E+A+ A A +H S IH++LP
Sbjct: 36 LVEAMRYAAMGGGKRMRPLLCVAACDLFHVDKERALRVAIAAESVHVYSLIHDDLPCM-D 94
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRI-LRVMVEMTRA 187
+ KPT + AF T +L DA+ F E+LA +PA + + + +E+ RA
Sbjct: 95 DDDQRRGKPTTHLAFDEATAVLAGDALQAFAYEVLA---DPATHEDAAVRADLCLELARA 151
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G+ G+ GQ +L + G D+ +T + K G L GAI+G
Sbjct: 152 SGTSGMAAGQMMDLMAEE---------GGFDLNLTTRLQQLKTGALIGFAVEAGAIMGKA 202
Query: 248 SEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
S LR Y +G+ I L + L K A K
Sbjct: 203 SASARTKLRGYAHDLGLAFQIADDLLDVEGDASALGKAAGK 243
>gi|373956720|ref|ZP_09616680.1| Polyprenyl synthetase [Mucilaginibacter paludis DSM 18603]
gi|373893320|gb|EHQ29217.1| Polyprenyl synthetase [Mucilaginibacter paludis DSM 18603]
Length = 324
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 19/199 (9%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
PVE+YEP+ + + + P L + AC++ GG +QA+ A A+ V H + +H++ +
Sbjct: 24 PVELYEPIYYIMALGGKRLRPCLLLMACDMFGGDVQQALAPALAIEVFHNFTLMHDD--I 81
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D+ L + KPT++ + N +L D M+ +L+ D+ RILR ++++
Sbjct: 82 MDKAPL-RRGKPTVHEKWNANVAILSGDVMMVEANKLIMQVDD-------RILRPVLDVF 133
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
GV EGQ Q D + L +T ++ + K L A GA++G
Sbjct: 134 NDTAV-GVCEGQ-------QIDMNFETLTHVT-IDEYINMIRLKTAVLVAGALKMGALVG 184
Query: 246 GGSEKEIELLRRYGFYVGM 264
G + E LL +G +G+
Sbjct: 185 GADDAEASLLYSFGEQLGI 203
>gi|365157809|ref|ZP_09354054.1| hypothetical protein HMPREF1015_00214 [Bacillus smithii 7_3_47FAA]
gi|363622479|gb|EHL73638.1| hypothetical protein HMPREF1015_00214 [Bacillus smithii 7_3_47FAA]
Length = 295
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 102/199 (51%), Gaps = 13/199 (6%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P + E M + + A + P L AA G E+ + AAAAL ++H S IH++LP
Sbjct: 31 PPVLKEAMDYSLQAGGKRIRPVLLFAAINSFGKDPERGMDAAAALEMIHTYSLIHDDLPS 90
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D L + KPT + + +L DA+L + +++A S + + + ++ ++
Sbjct: 91 MDDDDL-RRGKPTNHKVYGEANAILAGDALLTYAFQIIAQSPDLSEKEK---VAIIEQLA 146
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
+A G +G+V GQ +++ ++K + ++E ++ K GRL A GA++G
Sbjct: 147 KAAGPEGMVAGQVADMEG------EKKALTLEELEA---VHRNKTGRLIAFSVRAGALIG 197
Query: 246 GGSEKEIELLRRYGFYVGM 264
G +E E+ + +Y +++G+
Sbjct: 198 GATEAELAVFEKYAYHIGI 216
>gi|384208042|ref|YP_005593762.1| geranylgeranyl pyrophosphate synthase [Brachyspira intermedia
PWS/A]
gi|343385692|gb|AEM21182.1| geranylgeranyl pyrophosphate synthase [Brachyspira intermedia
PWS/A]
Length = 294
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 96/194 (49%), Gaps = 15/194 (7%)
Query: 71 EPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTS 130
E +++ + A + P L ACEL G +++I+ A AL ++H S +H++LP D
Sbjct: 35 EMLKYPLDAGGKRLRPILTCLACELFNGDYKKSIIPAVALELIHTYSLVHDDLPAMDNDD 94
Query: 131 LIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGS 190
L + KPT + + +LV D +L +LL+ +D + +++ E++ A G
Sbjct: 95 L-RRGKPTTHIKYGEANAILVGDGLLTHAFQLLSKTDVK----DSTLRKLLFELSYAAGI 149
Query: 191 QGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEK 250
G+V GQ+ +L + +++N +M + KK G + GAI ++
Sbjct: 150 NGMVMGQFIDLYYEE-----KEIN----FDMLKILHAKKTGAMIRGAIRLGAI-ASENDN 199
Query: 251 EIELLRRYGFYVGM 264
+IE + +YG +G+
Sbjct: 200 DIENITKYGEAIGL 213
>gi|390960730|ref|YP_006424564.1| bifunctional short chain isoprenyl diphosphate synthase
[Thermococcus sp. CL1]
gi|390519038|gb|AFL94770.1| bifunctional short chain isoprenyl diphosphate synthase
[Thermococcus sp. CL1]
Length = 343
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
KEP +YE RH+ A + P + + A E VGG E+A+ AAA+ +H S +H+++
Sbjct: 29 KEPRALYEASRHYPLAGGKRVRPFVVLRAAEAVGGDPEKALYPAAAVEFIHNYSLVHDDI 88
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE 183
D + + +PT++ + N +L D + E +A + + RIL V+V
Sbjct: 89 MDMDE---LRRGRPTVHKLWGVNMAILAGDLLFSKAFEAIARA-GVSPEKKARILDVLVR 144
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKK----KEGRLHACGAA 239
S + EGQ +++ T E+T + Y K K G L A
Sbjct: 145 T-----SNMLCEGQALDIEFE------------TREEVTVDEYLKMISGKTGALFEGSAE 187
Query: 240 CGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
GAI+G +E+ I+ L R+G VG+ I L + E+L K
Sbjct: 188 IGAIVGTDNEEYIKALARWGMNVGVAFQIWDDVLDLVADEEKLGK 232
>gi|14521122|ref|NP_126597.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
[Pyrococcus abyssi GE5]
gi|5458339|emb|CAB49828.1| idsA-like multifunctional short chain isoprenyl diphosphate
synthase [Pyrococcus abyssi GE5]
Length = 346
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 19/202 (9%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
KEP +YE RH+ A + P + + A E VGG+ +AI A A+ ++H S +H+++
Sbjct: 33 KEPKVLYEAARHYPLAGGKRIRPFVVLTATEAVGGNALKAIYPAVAIELIHNYSLVHDDI 92
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD-NPAGNNSGRILRVMV 182
D T + KPT++ + N +L D + E ++ ++ +P ++L +V
Sbjct: 93 MDMDETR---RGKPTVHKVWGINMAILAGDLLFSKAFEAISRAEISP--EKKAKVLETIV 147
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+ S + EGQ +L+ + + +E K G L A G
Sbjct: 148 K-----ASNELCEGQALDLEFENRE--------MVSIEEYMRMISGKTGALFDASAKVGG 194
Query: 243 ILGGGSEKEIELLRRYGFYVGM 264
I+G +E+ IE L R+G VGM
Sbjct: 195 IVGTENEEYIEALSRWGRNVGM 216
>gi|433607837|ref|YP_007040206.1| Polyprenyl synthetase [Saccharothrix espanaensis DSM 44229]
gi|407885690|emb|CCH33333.1| Polyprenyl synthetase [Saccharothrix espanaensis DSM 44229]
Length = 346
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 19/179 (10%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
PAL + + VGG +A+ A A+ ++H S +H+++ D T + +PT + F
Sbjct: 67 PALALLTAQAVGGSATEALPGAVAVELVHNFSLLHDDVMDGDATR---RHRPTAWTVFGV 123
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
N +L D++L L++LA S +PA + R+L + +Q + +GQ +L +
Sbjct: 124 NGAILAGDSLLTLALDVLAGSGHPAATQAIRVL--------SAATQRLNDGQAADLAFEE 175
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
G V + K L A GA+ GGG+ ++E LR++G +VG+
Sbjct: 176 --------RGDVQVAECVRMAQNKTAGLIGASCALGALFGGGTADQVEHLRQFGEHVGL 226
>gi|58696945|ref|ZP_00372440.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
simulans]
gi|58699606|ref|ZP_00374302.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
ananassae]
gi|225630859|ref|YP_002727650.1| Geranylgeranyl pyrophosphate synthase [Wolbachia sp. wRi]
gi|58533876|gb|EAL58179.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58536823|gb|EAL60043.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
simulans]
gi|225592840|gb|ACN95859.1| Geranylgeranyl pyrophosphate synthase [Wolbachia sp. wRi]
Length = 263
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 22/198 (11%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
++ MR+ + A ++ L VA+ + ++ I AAA+ +HA S IH++LP D
Sbjct: 25 KLISAMRYILLAPAKHIRSFLVVASSRVFNAEAKKVISVAAAIEFVHAYSLIHDDLPCMD 84
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
+ +S+ + + F T +L DA+L E+L+S + I++V +++A
Sbjct: 85 NSD-TRRSQLSCHKKFDEATAVLAGDALLTLAFEVLSSLNEK----RCEIIKV---LSQA 136
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
+G +G+V GQ ++ TD E + K +L A GAI+GG
Sbjct: 137 IGIRGMVGGQALDID--------------TDFNKIKEIHLMKTAKLFAASCEIGAIIGGA 182
Query: 248 SEKEIELLRRYGFYVGMI 265
++++ L +G +G+I
Sbjct: 183 TDEQRRALYNFGINLGLI 200
>gi|384915972|ref|ZP_10016175.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum
fumariolicum SolV]
gi|384526670|emb|CCG92046.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum
fumariolicum SolV]
Length = 299
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 112/239 (46%), Gaps = 16/239 (6%)
Query: 53 IGAHLRQAVV--VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAAL 110
I + LR+ V K+P ++E + + +F+ + P LC+A V + A+ A A+
Sbjct: 19 IESALRKYVTDKSKKPRILHEAIDYSLFSGGKRLRPILCLAGAHTVCMATDCALPMACAV 78
Query: 111 HVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPA 170
+H S IH++LP D + KP+++ + +L DA+L E +AS +P
Sbjct: 79 ECIHTYSLIHDDLPSMDNDDF-RRGKPSLHKIYGEAMAILTGDALLALAFE-IASLCSPL 136
Query: 171 GNNSGRILRVMV-EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKK 229
G S L M+ E+ RA GS+ +V GQ +L+ + K G+T + + +K
Sbjct: 137 G--SSYPLSTMIWELARAAGSRALVAGQVADLE------SEGKEIGLTQLRY---IHCRK 185
Query: 230 EGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
L GA+ EK + L+ +YG +G+ I+ L T+ E L K A K
Sbjct: 186 TAALITVALRLGAMSANADEKTLRLITKYGRSLGLAFQIIDDILDVTQTTEILGKSAGK 244
>gi|313896583|ref|ZP_07830132.1| geranyltranstransferase [Selenomonas sp. oral taxon 137 str. F0430]
gi|312974768|gb|EFR40234.1| geranyltranstransferase [Selenomonas sp. oral taxon 137 str. F0430]
Length = 295
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 109/227 (48%), Gaps = 21/227 (9%)
Query: 43 KSYWTS----VHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGG 98
K W S V + A L + ++ + + M + + A + P L +AA + VG
Sbjct: 6 KELWQSRRTLVERALQAELDRTDILDDKLRA--SMAYSLMAGGKRLRPILLMAAADAVGA 63
Query: 99 HREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPF 158
+ I AA AL ++H S IH++LP D + K T + A+ T +L DA+L
Sbjct: 64 DGTKFITAACALEMIHTYSLIHDDLPAMDNDD-YRRGKLTNHKAYDEGTAILAGDALLTL 122
Query: 159 GLE-LLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGIT 217
+L D PA R+LR++ E++R+ G++G+V GQ +L+ ++R+++
Sbjct: 123 AFTVILRQQDVPA----ERLLRIVDEISRSAGAEGMVGGQMLDLEA-----ENRRIS--- 170
Query: 218 DVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
+E + K G L GAIL G SE+++ L Y + G+
Sbjct: 171 -MEELQRVHMGKTGALFRAALRSGAILAGASEQQLAALTTYADHFGL 216
>gi|328952416|ref|YP_004369750.1| farnesyltranstransferase [Desulfobacca acetoxidans DSM 11109]
gi|328452740|gb|AEB08569.1| Farnesyltranstransferase [Desulfobacca acetoxidans DSM 11109]
Length = 296
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 98/216 (45%), Gaps = 10/216 (4%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
V E MR+ + A + P LC+AA E V G+ EQ + A AL ++H S IH++L +
Sbjct: 32 VVEAMRYSLLAGGKRLRPILCLAAAEAVAGNVEQVMPVAGALEMIHTYSLIHDDL-PAMD 90
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
+ +PT + F T +L D +L E+LA++ + V+ + RA
Sbjct: 91 DDDFRRGRPTCHKKFDEATAILAGDGLLTAAFEVLAAAATNHPAQASVYHEVVQTIARAA 150
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
G QG+V GQ +L + +E ++ K G L GA+LGGGS
Sbjct: 151 GYQGMVGGQMADLLAE---------GQPSTLEQVEAIHRLKTGALLTASVRSGALLGGGS 201
Query: 249 EKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
++I L YG G+I I L E E+ K
Sbjct: 202 ARDILALTHYGEKFGLIFQITDDLLDVEGESAEMGK 237
>gi|397906448|ref|ZP_10507248.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Caloramator
australicus RC3]
gi|397160405|emb|CCJ34585.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Caloramator
australicus RC3]
Length = 291
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 13/208 (6%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
V P + E M++ +FA + P LC+A CE + G+ E + A ++ ++H S IH++
Sbjct: 25 VDAPQIIIEAMKYSLFAGGKRIRPILCIAVCEALEGNLEDVLDIACSIEMIHTYSLIHDD 84
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D + K T + + +L D +L + E L N R +
Sbjct: 85 LPAMDNDDY-RRGKLTNHKVYGDAIAILAGDGLLNYAFETLLKV--IKRKNDKRFVDAAF 141
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
E+ +A G G++ GQ ++ + I D + +++K G+L GA
Sbjct: 142 EIAKASGITGMIGGQVIDIT---------NVGNIIDENLLVSMHERKTGKLIEASCNVGA 192
Query: 243 ILGGGSEKEIELLRRYGFYVGMIQGIVS 270
I+ E +E+ R Y +G+ IV
Sbjct: 193 IIANRYEY-LEITREYSKNLGVAFQIVD 219
>gi|380741688|tpe|CCE70322.1| TPA: bifunctional short chain isoprenyl diphosphate synthase (idsA)
[Pyrococcus abyssi GE5]
Length = 344
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 19/202 (9%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
KEP +YE RH+ A + P + + A E VGG+ +AI A A+ ++H S +H+++
Sbjct: 31 KEPKVLYEAARHYPLAGGKRIRPFVVLTATEAVGGNALKAIYPAVAIELIHNYSLVHDDI 90
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD-NPAGNNSGRILRVMV 182
D T + KPT++ + N +L D + E ++ ++ +P ++L +V
Sbjct: 91 MDMDETR---RGKPTVHKVWGINMAILAGDLLFSKAFEAISRAEISP--EKKAKVLETIV 145
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+ S + EGQ +L+ + + +E K G L A G
Sbjct: 146 K-----ASNELCEGQALDLEFENRE--------MVSIEEYMRMISGKTGALFDASAKVGG 192
Query: 243 ILGGGSEKEIELLRRYGFYVGM 264
I+G +E+ IE L R+G VGM
Sbjct: 193 IVGTENEEYIEALSRWGRNVGM 214
>gi|372222394|ref|ZP_09500815.1| geranyltranstransferase [Mesoflavibacter zeaxanthinifaciens S86]
Length = 324
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 27/213 (12%)
Query: 56 HLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHA 115
+L++ KEP ++YEP+ + + M P L + CEL G ++A+ AA A+ V H
Sbjct: 14 YLKENATHKEPTQLYEPINYILELGGKRMRPILTLMGCELFGTDYKKALPAAMAVEVFHN 73
Query: 116 ASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSG 175
S +H+++ + D + + + K T++ + NT +L DAML + LA D
Sbjct: 74 FSLVHDDI-MDD--APLRRGKTTVHEKWDVNTGILSGDAMLINAYQYLAQYD-------A 123
Query: 176 RILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKK----KEG 231
++L+ ++ + Q V EGQ ++ DD +T E Y + K
Sbjct: 124 KMLKELLVLFNTTALQ-VCEGQQYDVDFEVRDD------------VTLEEYLQMIAFKTS 170
Query: 232 RLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
L A GAI+GG S K+ E + +G +G+
Sbjct: 171 VLVAAALQMGAIVGGASAKDQEAIYAFGKNLGI 203
>gi|410453715|ref|ZP_11307660.1| polyprenyl synthetase [Bacillus bataviensis LMG 21833]
gi|409932929|gb|EKN69883.1| polyprenyl synthetase [Bacillus bataviensis LMG 21833]
Length = 297
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P + E M + + A + P L A + G ++ + AAA+ ++H S IH++LP
Sbjct: 31 PSVIKESMIYSLEAGGKRIRPLLLFATLDAFGIDPKKGLPVAAAIEMIHTYSLIHDDLPS 90
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE---LLASSDNPAGNNSGRILRVMV 182
D L + KPT + F +L DA+L + E LL++ PA L+++V
Sbjct: 91 MDNDDL-RRGKPTNHKVFGDAIAILAGDALLTYSFEVIGLLSNEFAPANTK----LKLVV 145
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
EM +A G++G+V GQ +++ +T E+ Y + K G+L GA
Sbjct: 146 EMAKAAGTEGMVGGQVADMEGEG--------KNLTLPELDY-IHIHKTGKLLRFSVVAGA 196
Query: 243 ILGGGSEKEIELLRRYGFYVGM 264
IL S+ +++ L + ++G+
Sbjct: 197 ILADSSQSQLDHLSGFAHHLGL 218
>gi|212703021|ref|ZP_03311149.1| hypothetical protein DESPIG_01059 [Desulfovibrio piger ATCC 29098]
gi|212673609|gb|EEB34092.1| polyprenyl synthetase [Desulfovibrio piger ATCC 29098]
Length = 298
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P + E M + + A + P LC++ L G E + A+A+ ++H S IH++LP
Sbjct: 33 PPRLRESMLYSLQAGGKRLRPVLCLSCAALCGLKAEDVLPFASAIEMVHTYSLIHDDLPA 92
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D L + KP+ + AF T +L DA+L + + PA G++LR M E
Sbjct: 93 MDDDDL-RRGKPSNHKAFDEATAILAGDALLTDAFAHMCRVELPA----GQVLRAMAEFA 147
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT--YETYKKKEGRLHACGAACGAI 243
RA GS G+V GQ + D G+ V M + K G L CGA+
Sbjct: 148 RAAGSSGMVGGQ----------EWDMLYTGLPPVSMAELRRMHAMKTGALLRASCVCGAL 197
Query: 244 LGGGSEKEIELLRRYGFYVGM 264
L G ++ E + RYG +G+
Sbjct: 198 LAGAADDVCERIGRYGAALGV 218
>gi|332159126|ref|YP_004424405.1| bifunctional short chain isoprenyl diphosphate synthase IdsA
[Pyrococcus sp. NA2]
gi|331034589|gb|AEC52401.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
[Pyrococcus sp. NA2]
Length = 341
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 17/201 (8%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
KEP +YE RH+ A + P + + + E VGG +A+ A A+ ++H S +H+++
Sbjct: 28 KEPKVLYEAARHYPLAGGKRVRPFVVLTSTEAVGGDWRKALYPAVAIELIHNYSLVHDDI 87
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE 183
D T + KPT++ + N +L D + E ++ ++ P +IL +V
Sbjct: 88 MDMDETR---RGKPTVHRVWGINMAILAGDLLFSKAFEAISRAEVPP-EKKAKILETIV- 142
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAI 243
+ S + EGQ +L+ + +T +E K G L A G I
Sbjct: 143 ----LASNELCEGQAMDLEFENRE-------AVT-IEEYMNMVSGKTGALFEASAKIGGI 190
Query: 244 LGGGSEKEIELLRRYGFYVGM 264
+G SE+ I L R+G VG+
Sbjct: 191 VGSESEEYINALARWGRNVGI 211
>gi|15895350|ref|NP_348699.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
ATCC 824]
gi|337737298|ref|YP_004636745.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
DSM 1731]
gi|384458806|ref|YP_005671226.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
EA 2018]
gi|15025068|gb|AAK80039.1|AE007710_9 Predicted geranylgeranyl pyrophosphate synthase [Clostridium
acetobutylicum ATCC 824]
gi|325509495|gb|ADZ21131.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
EA 2018]
gi|336291039|gb|AEI32173.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
DSM 1731]
Length = 289
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 13/196 (6%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
VYE M + + A + P L +A+ + ++ I AAA+ ++H S IH++LP D
Sbjct: 28 VYESMNYSLNAGGKRVRPLLLLASYAIYNKDYKEVIDIAAAIEMIHTYSLIHDDLPCMDN 87
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
L + +PT + F + LL D +L + ++ G + L+ + +++A
Sbjct: 88 DDL-RRGRPTNHKIFGYSIALLAGDGLLNEAMNIMFKYCIGKGEEA---LKACLMISKAA 143
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
S G++ GQ ++ + +K+N + E+ Y +KKK G L GAILGG
Sbjct: 144 SSDGMIGGQVVDIL-----SEGKKIN---EDELRY-MHKKKTGELIKAAVVSGAILGGAP 194
Query: 249 EKEIELLRRYGFYVGM 264
++ELL +YG +G+
Sbjct: 195 LHDVELLSQYGDKLGL 210
>gi|334127647|ref|ZP_08501552.1| geranyltranstransferase [Centipeda periodontii DSM 2778]
gi|333388960|gb|EGK60127.1| geranyltranstransferase [Centipeda periodontii DSM 2778]
Length = 291
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 109/243 (44%), Gaps = 34/243 (13%)
Query: 58 RQAVV--------VKEPV---EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVA 106
RQA+V K PV + M + + A + P L +AA + VG + +
Sbjct: 8 RQALVERALTEEMAKTPVLDDTLRASMEYSLMAGGKRLRPVLLMAAADAVGADGTKFLPV 67
Query: 107 AAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE-LLAS 165
A AL ++H S IH++LP D +L + KPT + F +L DA+L +L
Sbjct: 68 ACALEMIHTYSLIHDDLPAMDNDNL-RRGKPTNHVKFSEGIAILAGDALLTLAFTVILRQ 126
Query: 166 SDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYET 225
D PA +LRV+ E++RA G++G+V GQ +L C ++T E
Sbjct: 127 KDVPAEA----LLRVVDEISRAAGAEGMVGGQVLDLAAENC-------------QITMEE 169
Query: 226 YKK----KEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEE 281
++ K G L GAIL G SE+++ +L Y + G+ I L EE
Sbjct: 170 LRRVHMGKTGALFHAALRSGAILAGASEEQLAVLTAYADHFGLAFQITDDILDVIGSAEE 229
Query: 282 LKK 284
L K
Sbjct: 230 LGK 232
>gi|114331488|ref|YP_747710.1| polyprenyl synthetase [Nitrosomonas eutropha C91]
gi|114308502|gb|ABI59745.1| farnesyl-diphosphate synthase [Nitrosomonas eutropha C91]
Length = 297
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 31/238 (13%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++E MR+ V + P L AA EL G + Q I A+AA+ ++HA S +H++LP
Sbjct: 31 PARLHEAMRYAVLNGGKRVRPLLSFAAGELSGADKTQVIAASAAVELIHAYSLVHDDLPC 90
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASS---DNPAGNNSGRILRVMV 182
D ++ + KPT + + T LLV D++ +LLA S ++P R +
Sbjct: 91 MD-NDILRRGKPTCHIRYGEPTALLVGDSLQSLAFQLLAESALTEDP---------RTQL 140
Query: 183 EMTR----AMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHAC-- 236
EM R A GS+G+ GQ +L D ++ E+ + K + A
Sbjct: 141 EMIRHLAFAAGSRGMAGGQAIDL--------DSVGKTLSLPELEFMHIHKTGALIRAAVI 192
Query: 237 -GAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVN 293
GA CG+ L +E + + L + +G+ +V L L K A K E N
Sbjct: 193 LGARCGSRL---NEDQFKQLDHFAKCIGLAFQVVDDILDAEASTAALGKTAGKDAENN 247
>gi|404485150|ref|ZP_11020349.1| hypothetical protein HMPREF9448_00761 [Barnesiella intestinihominis
YIT 11860]
gi|404338937|gb|EJZ65380.1| hypothetical protein HMPREF9448_00761 [Barnesiella intestinihominis
YIT 11860]
Length = 324
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 102/212 (48%), Gaps = 19/212 (8%)
Query: 53 IGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHV 112
I A L + EP +Y P+R+ + + P L + ACE+ G +A+ AA L V
Sbjct: 11 IEAELSKIEYAAEPDGLYAPVRYELSLGGKRVRPLLTLLACEMFAGDYRRALNAAVGLEV 70
Query: 113 MHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGN 172
H + +H++ + D+ + + KPT++ + NT +L DAM +A ++ P
Sbjct: 71 FHNFTLLHDD--VMDKAD-VRRGKPTVHKVWDENTAILSGDAMEIIAFRYIARTEAP--- 124
Query: 173 NSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGR 232
++G ++ + ++ + + EGQ +++ + DD +T+ E E + K
Sbjct: 125 HTGAVVELFLKT-----ALEICEGQQYDMEFERRDD-------VTEAEYI-EMIRLKTAV 171
Query: 233 LHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
L GAI+GG SE + + + R+G +G+
Sbjct: 172 LLGGALKIGAIIGGASETDADCVYRFGESLGL 203
>gi|421484057|ref|ZP_15931629.1| geranyltranstransferase [Achromobacter piechaudii HLE]
gi|400197764|gb|EJO30728.1| geranyltranstransferase [Achromobacter piechaudii HLE]
Length = 303
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 112/257 (43%), Gaps = 42/257 (16%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAA---CELVGG--HREQAI-VAAAALHVMHAASFI 119
PV ++E MR+ V + A+ AA C + G E ++ AAAA+ ++HA S +
Sbjct: 34 PVRLHEAMRYAVLGGGKRVRAAMVYAAGQACPVSGSVLAIEASLDRAAAAVELIHAYSLV 93
Query: 120 HENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD-NPAGNNSGRIL 178
H++LP D +L + +PT + F T +L DA+ P +LLAS PA I+
Sbjct: 94 HDDLPCMDDDTL-RRGQPTTHVKFDEATAMLAGDALQPLAFDLLASMPIAPA-----LIV 147
Query: 179 RVMVEMTRAMGSQGVVEGQYNELQC---SQCDDDDRKLNGITDVEMTYETYKKKEGRLHA 235
+ + RA GSQG+ GQ +L S DD + ++ + K G + A
Sbjct: 148 QATQSLARAAGSQGMAGGQAIDLLSVGRSLSRDDLQTMHSM------------KTGAMLA 195
Query: 236 CGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK------- 288
C A G I+ G S + L Y +G+ +V L T + L K K
Sbjct: 196 CSVALGGIVAGASSASRQALDAYAQAMGLAFQVVDDILDVTADTASLGKTPGKDAAENKP 255
Query: 289 -------LREVNSFNDE 298
L E +F DE
Sbjct: 256 TYVSLLGLSEARAFADE 272
>gi|223986292|ref|ZP_03636304.1| hypothetical protein HOLDEFILI_03614 [Holdemania filiformis DSM
12042]
gi|223961731|gb|EEF66231.1| hypothetical protein HOLDEFILI_03614 [Holdemania filiformis DSM
12042]
Length = 280
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 103/233 (44%), Gaps = 17/233 (7%)
Query: 58 RQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAAS 117
RQ ++K EV E M + + + P L A E G + +AA AL +MH S
Sbjct: 11 RQCRLLKRS-EVSEAMEYSLMGKGKRLRPQLLFAVAEGYGLSAQAGFMAAGALEMMHTYS 69
Query: 118 FIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA-SSDNPAGNNSGR 176
IH++LP D + + T + F T +L D +L L A SSD+P +
Sbjct: 70 LIHDDLPAMDNDD-YRRGRKTCHKQFNEATAILAGDGLLTQAFVLAANSSDDPV-----K 123
Query: 177 ILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHAC 236
L+++ E+ A G++G++ GQ +L+ +T +E E + K G L
Sbjct: 124 ALKIVKELASAGGAEGMILGQIKDLEAENS-------QAVT-LEQLKEVHLYKTGCLFTA 175
Query: 237 GAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKL 289
GAIL G + I RR G +G+ I L T+ +EL K A L
Sbjct: 176 PLVMGAIL-AGQDAAIPQWRRIGALMGLAFQIQDDILDVTKSSKELGKSASDL 227
>gi|381165921|ref|ZP_09875140.1| Geranyltranstransferase [Phaeospirillum molischianum DSM 120]
gi|380684905|emb|CCG39952.1| Geranyltranstransferase [Phaeospirillum molischianum DSM 120]
Length = 301
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 99/217 (45%), Gaps = 14/217 (6%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
V E MR+ + P L + + L AI A A+ ++H S IH++LP D
Sbjct: 39 VIEAMRYSSLDGGKRLRPFLVMQSASLFRVAESAAIRVACAIEMIHCYSLIHDDLPCMDN 98
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV-EMTRA 187
L + +PT + F +T LL DA+ E+LA NPA + ++ +V E+ A
Sbjct: 99 DDL-RRGRPTCHRHFDESTALLAGDALQTRAFEVLA---NPATHPDPQVRCDLVSELAHA 154
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G G+V GQ +LQ D D + GIT ++ + K GRL + GA+LG G
Sbjct: 155 SGGLGMVGGQTIDLQAHTLDLD---VAGITRLQ------QMKTGRLFSFSCEAGAVLGKG 205
Query: 248 SEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
+ LR Y +G+ I L + EE+ K
Sbjct: 206 HGELRLALRNYSHDLGLAFQIADDILDVEGDAEEVGK 242
>gi|440698192|ref|ZP_20880553.1| polyprenyl synthetase [Streptomyces turgidiscabies Car8]
gi|440279407|gb|ELP67302.1| polyprenyl synthetase [Streptomyces turgidiscabies Car8]
Length = 355
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 85/189 (44%), Gaps = 19/189 (10%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
PAL V + E+ G E I A A+ ++H S +H++L D + + T++ P
Sbjct: 70 PALAVLSAEVTGAGPEVGIPGAVAVELVHNFSLLHDDLMDGDEQR---RHRDTVWKVHGP 126
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
+LV DA+ E+L +GR R + TRA+ ++GQ ++
Sbjct: 127 AQAILVGDALFALANEILLELGTV---EAGRATRRLTTATRAL-----IDGQAQDISYEH 178
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
D VE E K G L AC ++ GA+LGG E+ + L +YG+++G+
Sbjct: 179 RDR--------VSVEECLEMEGNKTGALLACASSIGAVLGGADERTADTLEKYGYHLGLA 230
Query: 266 QGIVSRRLG 274
V LG
Sbjct: 231 FQAVDDLLG 239
>gi|121534498|ref|ZP_01666321.1| Polyprenyl synthetase [Thermosinus carboxydivorans Nor1]
gi|121306991|gb|EAX47910.1| Polyprenyl synthetase [Thermosinus carboxydivorans Nor1]
Length = 221
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 4/133 (3%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
VYE MR+ +FA + P L +AA + VGG Q + A L ++H S IH++LP D
Sbjct: 33 VYEAMRYSLFAGGKRLRPILLMAAADAVGGRGSQYLHVACGLEMIHTYSLIHDDLPAMDN 92
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
+ KPT + F +L D +L E++ S G G +L+V+ E+ +A
Sbjct: 93 DDF-RRGKPTSHRVFGEGMAILAGDGLLTAAFEVMLSQ---PGVEPGVLLKVVREIAQAA 148
Query: 189 GSQGVVEGQYNEL 201
G G+V GQ +L
Sbjct: 149 GPAGMVGGQAVDL 161
>gi|345888510|ref|ZP_08839592.1| hypothetical protein HMPREF0178_02366 [Bilophila sp. 4_1_30]
gi|345040637|gb|EGW44875.1| hypothetical protein HMPREF0178_02366 [Bilophila sp. 4_1_30]
Length = 302
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 122/257 (47%), Gaps = 23/257 (8%)
Query: 36 MSTPNKNKSYWTSVHE---DIGAHLRQAV-VVKEPVEVYEPMRHFVFAAPVNMAPALCVA 91
MSTP ++ T + E + A+L+ + + + E M + + A + P LC++
Sbjct: 1 MSTPYDSQQVKTILAERGAQVEAYLQHCLDAIPMQGRLKEAMYYSLLAGGKRLRPVLCLS 60
Query: 92 ACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLV 151
L G E + AA+L ++H S IH++LP D L + +P+ + AF T +L
Sbjct: 61 TAALFGLSAEAVMPFAASLEMIHTYSLIHDDLPAMDDDDL-RRGRPSCHKAFDEATAILA 119
Query: 152 ADAMLPFGLELLASS--DNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDD 209
DA+L +AS+ D PA GR+L + ++ A GS G+V GQ ++ C+
Sbjct: 120 GDALLTDAFGFMASTVKDLPA----GRVLEALASVSSAAGSAGMVGGQILDMDCT----- 170
Query: 210 DRKLNGITDVEM-TYET-YKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQG 267
G TDV + T +T + K G + G +L G SE +I LR YG +G+
Sbjct: 171 -----GKTDVPLETLQTLHALKTGAMFRVACVSGGLLAGASEPDIASLRAYGEALGVTFQ 225
Query: 268 IVSRRLGPTEEIEELKK 284
IV L T + L K
Sbjct: 226 IVDDILDETADTATLGK 242
>gi|335049359|ref|ZP_08542358.1| geranyltranstransferase [Megasphaera sp. UPII 199-6]
gi|333763496|gb|EGL40945.1| geranyltranstransferase [Megasphaera sp. UPII 199-6]
Length = 295
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 77/164 (46%), Gaps = 6/164 (3%)
Query: 40 NKNKSYWTSVHEDIGAHLRQAVVVKEPV--EVYEPMRHFVFAAPVNMAPALCVAACELVG 97
N ++Y + I AHL+Q + V EP +Y+ M + + A + P L +AA E +G
Sbjct: 2 NPCEAYLAAKKTVIEAHLQQLLPVTEPAFAPLYKAMNYSLLAGGKRIRPILFLAALEALG 61
Query: 98 GHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLP 157
+ A AL +H+ S IH++LP D L + KPT + F +L D +L
Sbjct: 62 KESSVYMDVACALECVHSYSLIHDDLPAMDNDDL-RRGKPTNHRVFGEGMAILAGDGLLT 120
Query: 158 FGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNEL 201
F ELLA G +RV + A G G+V GQ +L
Sbjct: 121 FAFELLARQRVADAEKIGACIRV---LAHAAGPAGMVGGQAYDL 161
>gi|332524231|ref|ZP_08400457.1| farnesyl-diphosphate synthase [Rubrivivax benzoatilyticus JA2]
gi|332107566|gb|EGJ08790.1| farnesyl-diphosphate synthase [Rubrivivax benzoatilyticus JA2]
Length = 296
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 104/253 (41%), Gaps = 14/253 (5%)
Query: 42 NKSYWTSVHED-IGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHR 100
N W D + A L V P + E MR+ V + P L +AACE +GG R
Sbjct: 6 NFDQWARRQLDAVEAALEAWVPDNAPAGLGEAMRYGVLDGGKRLRPLLVMAACEALGGSR 65
Query: 101 EQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGL 160
E A+ +A A+ ++HA S +H+++P D ++ + KPT++ + +L DAM
Sbjct: 66 EAALRSACAVELIHAYSLVHDDMPCMD-NDVLRRGKPTVHVKYGEAQAMLAGDAMQALAF 124
Query: 161 ELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVE 220
E+L + ++R++ G G D + D
Sbjct: 125 EILTPDEGVEPALQASLVRLLARAAGHAGMAGGQA------------IDLANTGRLLDEA 172
Query: 221 MTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
E ++KK G L GA G + + L YG +G+ +V L T+ +
Sbjct: 173 TLREMHRKKTGALLLVSVQMGAACGSPAPATWQALSEYGEAIGLAFQVVDDILDCTQASD 232
Query: 281 ELKKLAFKLREVN 293
+L K A K E N
Sbjct: 233 KLGKTAGKDLEAN 245
>gi|405354222|ref|ZP_11023602.1| Octaprenyl-diphosphate synthase [Chondromyces apiculatus DSM 436]
gi|397092465|gb|EJJ23223.1| Octaprenyl-diphosphate synthase [Myxococcus sp. (contaminant ex DSM
436)]
Length = 310
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 15/192 (7%)
Query: 73 MRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLI 132
+R V A + P LC+ ACE VGG + A+ AA A+ ++H S +H++LP D
Sbjct: 49 IREAVLADGKRLRPILCLEACEWVGGSLKAALPAACAIEMIHKMSLVHDDLPAMDDAE-T 107
Query: 133 PKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDN-PAGNNSGRILRVMVEMTRAMGSQ 191
+P ++ +L DA+L LLAS PA R+L + + +A+G+
Sbjct: 108 RNGRPALHKVHGEALAILAGDALLVHAFGLLASIRAVPA----ERVLGAISRLCQALGTA 163
Query: 192 GVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKE 251
G+ GQ ++ D KL+ + T++T E + GA +GG +
Sbjct: 164 GLAGGQALDVLSQSEDVTPEKLDHV----HTWKTASFFEAAM-----VIGAEVGGADASQ 214
Query: 252 IELLRRYGFYVG 263
+E L RYG +G
Sbjct: 215 VEALARYGKLLG 226
>gi|95928787|ref|ZP_01311533.1| Twin-arginine translocation pathway signal [Desulfuromonas
acetoxidans DSM 684]
gi|95135132|gb|EAT16785.1| Twin-arginine translocation pathway signal [Desulfuromonas
acetoxidans DSM 684]
Length = 297
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 116/244 (47%), Gaps = 11/244 (4%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKE--PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHR 100
K+Y TS + + L Q + K+ P +++E M + VFA + P L +AACE VGG
Sbjct: 4 KNYLTSQRQRVEEALAQTLPPKQQHPTQLHEAMHYSVFAGGKRLRPILMMAACEAVGGDI 63
Query: 101 EQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGL 160
E + AA A+ ++H S IH++LP D L + +PT + F T +L DA+L
Sbjct: 64 ENVLPAACAMEMIHTYSLIHDDLPAMDDDDL-RRGQPTNHKVFGEATAILAGDALLTEAF 122
Query: 161 ELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVE 220
+L++ + N V+ + RA G+ G+V GQ +++ + D+
Sbjct: 123 VVLSAPSDSVQINDRTRREVIQLLARAAGAAGMVGGQIVDMEAEGMEQ--------PDLA 174
Query: 221 MTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
+ K G L GA+LGG + ++ E L R+G G+ I L T + E
Sbjct: 175 TVDYIHAHKTGALILASIRAGALLGGANTEQYEALSRFGKLAGLAFQIADDILDITGDQE 234
Query: 281 ELKK 284
+L K
Sbjct: 235 QLGK 238
>gi|12862619|dbj|BAB32548.1| putative GGPP synthase [Lactuca indica var. laciniata]
Length = 205
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 11/155 (7%)
Query: 134 KSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGV 193
+ KPT + + + +L DA+L F E + ++ G +S RILR + E+ + +GS+G+
Sbjct: 6 RGKPTNHIVYGEDVAVLAGDALLSFSFEHITTA--TKGVSSDRILRAIGELAKCIGSEGL 63
Query: 194 VEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIE 253
V GQ ++ CS+ D G+ +E + K L GAI+GGGS++EIE
Sbjct: 64 VAGQVVDV-CSEGAD-----VGLDHLEFIH---LHKTAALLEGSVVLGAIMGGGSDEEIE 114
Query: 254 LLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
LR++ +G++ +V L T+ EEL K A K
Sbjct: 115 KLRKFARSIGLLFQVVDDILDVTKSSEELGKTAGK 149
>gi|389818539|ref|ZP_10208820.1| geranyltranstransferase [Planococcus antarcticus DSM 14505]
gi|388463822|gb|EIM06165.1| geranyltranstransferase [Planococcus antarcticus DSM 14505]
Length = 293
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 110/231 (47%), Gaps = 14/231 (6%)
Query: 59 QAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAAC-ELVGGHREQAIVAAAALHVMHAAS 117
Q + + P + E M + + A + P L +A EL G A+ AAA+ ++H S
Sbjct: 21 QILSLSIPNSLKESMHYSLQAGGKRIRPILLLAVLHELSGQEHPDALKVAAAIEMIHTYS 80
Query: 118 FIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRI 177
IH++LP D L + PT + F +L DA+L + ++A + + ++
Sbjct: 81 LIHDDLPSMDNDDL-RRGMPTNHKVFGEAVAILAGDALLTYSFGIVARLQHVSSDDK--- 136
Query: 178 LRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACG 237
+R+M M+ + G++G+V GQ +++ +++KL +E + ++ K G L
Sbjct: 137 VRLMDLMSVSSGAEGMVGGQVLDIEG-----EEKKLT----LEELEQVHRLKTGALLTYS 187
Query: 238 AACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
G IL S +EI L R+G ++G+ I L T +EL K A K
Sbjct: 188 ILAGGILAQASNEEILALSRFGEHIGLAFQIQDDILDVTGTSQELGKTAGK 238
>gi|225620225|ref|YP_002721482.1| geranylgeranyl pyrophosphate synthase [Brachyspira hyodysenteriae
WA1]
gi|225215044|gb|ACN83778.1| geranylgeranyl pyrophosphate synthase [Brachyspira hyodysenteriae
WA1]
Length = 296
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 96/195 (49%), Gaps = 15/195 (7%)
Query: 71 EPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTS 130
E +++ + A + P L ACEL G +++I+ A AL ++H S +H++LP D
Sbjct: 35 EMLKYPLDAGGKRLRPILTCLACELFNGDYKKSIIPAVALELIHTYSLVHDDLPAMDNDD 94
Query: 131 LIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGS 190
L + KPT + + +LV D +L +LL+ +D + +++ E++ A G
Sbjct: 95 L-RRGKPTTHVKYGEANAILVGDGLLTHAFQLLSKTDVK----DSTLRKLLFELSYAAGI 149
Query: 191 QGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG-SE 249
G+V GQ+ +L + +++N +M + KK G + GAI ++
Sbjct: 150 NGMVMGQFIDLYYEE-----KEIN----FDMLKILHAKKTGAMIRGAIRLGAISSENIND 200
Query: 250 KEIELLRRYGFYVGM 264
+IE + +YG +G+
Sbjct: 201 NDIENITKYGEAIGL 215
>gi|359798545|ref|ZP_09301116.1| geranyltranstransferase [Achromobacter arsenitoxydans SY8]
gi|359363367|gb|EHK65093.1| geranyltranstransferase [Achromobacter arsenitoxydans SY8]
Length = 303
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 105/229 (45%), Gaps = 28/229 (12%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAA---CELVGG--HREQAI-VAAAALHVMHAASFI 119
P ++E MR+ V + AL AA C + G E ++ AAAA+ ++HA S +
Sbjct: 34 PSRLHEAMRYAVLGGGKRVRAALVYAAGQACPVSGSVLAIEASLDRAAAAVELIHAYSLV 93
Query: 120 HENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD-NPAGNNSGRIL 178
H++LP D +L + +PT + F T +L DA+ P ELLAS PA I+
Sbjct: 94 HDDLPCMDDDTL-RRGRPTTHVQFDEATAMLAGDALQPLAFELLASMPIAPA-----LIV 147
Query: 179 RVMVEMTRAMGSQGVVEGQYNELQC---SQCDDDDRKLNGITDVEMTYETYKKKEGRLHA 235
+ + RA GSQG+ GQ +L S D+ + ++G+ K G + A
Sbjct: 148 QATQSLARAAGSQGMAGGQAIDLFSVGRSLSRDELQMMHGM------------KTGAMLA 195
Query: 236 CGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
C A G I+ G S + L Y VG+ +V L T + L K
Sbjct: 196 CSVALGGIVAGASSASRQALDAYAQAVGLAFQVVDDILDVTADSASLGK 244
>gi|429124140|ref|ZP_19184672.1| geranylgeranyl pyrophosphate synthase [Brachyspira hampsonii 30446]
gi|426279870|gb|EKV56889.1| geranylgeranyl pyrophosphate synthase [Brachyspira hampsonii 30446]
Length = 294
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 96/194 (49%), Gaps = 15/194 (7%)
Query: 71 EPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTS 130
E +++ + A + P L ACEL G +++I+ A +L ++H S +H++LP D
Sbjct: 35 EMLKYPLDAGGKRLRPILTCLACELFEGDYKKSIIPAVSLELIHTYSLVHDDLPAMDNDD 94
Query: 131 LIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGS 190
L + KPT + + +LV D +L + +LL+ +D + +++ E++ A G
Sbjct: 95 L-RRGKPTTHVKYGEANAILVGDGLLTYAFQLLSKTDVK----DSTLRKLLFELSYAAGV 149
Query: 191 QGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEK 250
G+V GQ+ +L + +++N +M + KK G + GAI ++
Sbjct: 150 NGMVMGQFIDLYYEE-----KEIN----FDMLKVLHAKKTGAMIRGAVRLGAI-SSENDN 199
Query: 251 EIELLRRYGFYVGM 264
+IE + +Y VG+
Sbjct: 200 DIENITKYAEAVGL 213
>gi|332531501|ref|ZP_08407403.1| farnesyl-diphosphate synthase [Hylemonella gracilis ATCC 19624]
gi|332039053|gb|EGI75477.1| farnesyl-diphosphate synthase [Hylemonella gracilis ATCC 19624]
Length = 313
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 108/239 (45%), Gaps = 21/239 (8%)
Query: 57 LRQAVVVKEP----VEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHV 112
L++ V V EP V + MR+ V + P L +AACE V G + A+ AA A +
Sbjct: 24 LQEWVGVDEPEHLDVVLGLAMRYAVLDGGKRLRPLLVLAACEAVRGEADAALRAACATEL 83
Query: 113 MHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDN---P 169
+HA S +H+++P D ++ + KPT++ F LL DA+ ELL D P
Sbjct: 84 IHAYSLVHDDMPCMD-NDVLRRGKPTVHVQFGEAQALLAGDALQALAFELLTPDDEVAVP 142
Query: 170 AGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKK 229
G + R+ R+ + RA GS G+ GQ +L D+ +L + ++ K
Sbjct: 143 VGMQA-RLCRL---LARAAGSSGMAGGQAIDLASVGVKLDEERLR---------QMHRLK 189
Query: 230 EGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
G L GA G ++ + L YG +G+ +V L T + L K A K
Sbjct: 190 TGALLQASVMMGAACGHPTQAQQAALSDYGAAIGLAFQVVDDILDVTADSATLGKTAGK 248
>gi|315652073|ref|ZP_07905074.1| geranyltranstransferase [Lachnoanaerobaculum saburreum DSM 3986]
gi|315485720|gb|EFU76101.1| geranyltranstransferase [Lachnoanaerobaculum saburreum DSM 3986]
Length = 297
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 82/171 (47%), Gaps = 14/171 (8%)
Query: 97 GGHREQAIVA--AAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADA 154
G + I+A AA+ ++H S IH++LP D L + KPT + ++ + +L D
Sbjct: 57 GDEYSEEIIAPFLAAIEMIHTFSLIHDDLPAMDNDRL-RRGKPTTWVSYGEDMAILAGDM 115
Query: 155 MLPFGLELLAS--SDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRK 212
+ E+++ + N R+ R M + RA G+ G++ GQ C D +
Sbjct: 116 LSVQAFEIISKKMQETDDFNILKRMSRAMYTLARATGAFGMIGGQ--------CVDVEYS 167
Query: 213 LNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVG 263
+T+ M Y TY K G L A G IL G SE E+ LL++ G YVG
Sbjct: 168 GKKMTEEVMKY-TYALKTGALLAASFVVGGILAGASETEVRLLKKAGSYVG 217
>gi|410478476|ref|YP_006766113.1| geranylgeranyl pyrophosphate synthase [Leptospirillum ferriphilum
ML-04]
gi|424866252|ref|ZP_18290093.1| Geranyltranstransferase [Leptospirillum sp. Group II 'C75']
gi|124515823|gb|EAY57332.1| Geranyltranstransferase [Leptospirillum rubarum]
gi|387223049|gb|EIJ77421.1| Geranyltranstransferase [Leptospirillum sp. Group II 'C75']
gi|406773728|gb|AFS53153.1| geranylgeranyl pyrophosphate synthase [Leptospirillum ferriphilum
ML-04]
Length = 303
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 107/235 (45%), Gaps = 15/235 (6%)
Query: 34 MAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVY----EPMRHFVFAAPVNMAPALC 89
MA S P ++Y + L ++ VKE Y E MR+ + A + P L
Sbjct: 1 MADSQPVAIEAYLNRCKNAVEQFL-DSLFVKEQRTDYGTLAESMRYSLLAGGKRIRPVLA 59
Query: 90 VAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTEL 149
+AA E +G I A L ++H S IH++LP D SL + KPT + + T +
Sbjct: 60 MAAIEALGKDPIPYIPLLAPLELIHTYSLIHDDLPSMDNDSL-RRGKPTNHVIYGDATAI 118
Query: 150 LVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDD 209
L DA+L LL+ D + L+++ E++ G G+V GQ ++ +
Sbjct: 119 LAGDALLTHAFTLLSDPDYDKLVSFEIRLKIIQELSVGAGVNGMVGGQQMDIAS-----E 173
Query: 210 DRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
+ LN ++ +E ++ K G L GA+LG S + E L RYG VG+
Sbjct: 174 GKALN-LSSLEFLHQ---HKTGALIRASLRIGALLGKASSPDFEHLDRYGQAVGI 224
>gi|408527803|emb|CCK25977.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
davawensis JCM 4913]
Length = 377
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 85/189 (44%), Gaps = 19/189 (10%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
PAL V + E+ G E I A A+ ++H S +H++L D + + T++ P
Sbjct: 92 PALAVLSAEVTGAAPEVGIPGAVAVELVHNFSLLHDDLMDGDEQR---RHRDTVWKVHGP 148
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
+LV DA+ ELL +GR R + TRA+ ++GQ ++
Sbjct: 149 AQAILVGDALFALANELLLEIGT---VEAGRATRRLTTATRAL-----IDGQAQDISYEH 200
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
D VE E K G L AC ++ GA+LGG ++ + L +YG+++G+
Sbjct: 201 RDR--------VSVEECLEMEGNKTGALLACASSIGAVLGGAGDRTADTLEKYGYHLGLA 252
Query: 266 QGIVSRRLG 274
V LG
Sbjct: 253 FQAVDDLLG 261
>gi|301308384|ref|ZP_07214338.1| polyprenyl synthetase [Bacteroides sp. 20_3]
gi|423340090|ref|ZP_17317830.1| hypothetical protein HMPREF1059_03755 [Parabacteroides distasonis
CL09T03C24]
gi|300833854|gb|EFK64470.1| polyprenyl synthetase [Bacteroides sp. 20_3]
gi|409228392|gb|EKN21283.1| hypothetical protein HMPREF1059_03755 [Parabacteroides distasonis
CL09T03C24]
Length = 324
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 21/220 (9%)
Query: 46 WTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIV 105
+ ++ + I + + Q P +YEP+ + + + PAL + AC + E AI
Sbjct: 4 FENILQRIKSEISQLQFTNPPKSLYEPIEYILSLGGKRIRPALTLMACNIYNNSIENAIK 63
Query: 106 AAAALHVMHAASFIHENL-PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA 164
A L V H + +H++L +D+ ++KPT++ + NT +L DAML +L+
Sbjct: 64 PALGLEVFHNFTLLHDDLMDEADKR----RNKPTVHKVWNANTAILSGDAMLIAAYQLIG 119
Query: 165 SSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYE 224
S+++ G + +V+ T+ + GQ +++ D E E
Sbjct: 120 STEH------GHLKQVLDLFTQTAAE--ICGGQQFDMEFESRMD--------VSEEEYIE 163
Query: 225 TYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
+ K L AC GA+LGG S+K+ + L +G +G+
Sbjct: 164 MIRLKTAVLLACALKTGALLGGASQKDADHLYAFGINIGL 203
>gi|410472460|ref|YP_006895741.1| geranyltranstransferase [Bordetella parapertussis Bpp5]
gi|412338917|ref|YP_006967672.1| geranyltranstransferase [Bordetella bronchiseptica 253]
gi|427815400|ref|ZP_18982464.1| probable geranyltranstransferase [Bordetella bronchiseptica 1289]
gi|408442570|emb|CCJ49121.1| probable geranyltranstransferase [Bordetella parapertussis Bpp5]
gi|408768751|emb|CCJ53521.1| probable geranyltranstransferase [Bordetella bronchiseptica 253]
gi|410566400|emb|CCN23961.1| probable geranyltranstransferase [Bordetella bronchiseptica 1289]
Length = 303
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 101/233 (43%), Gaps = 28/233 (12%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACEL---------VGGHREQAIVAAAALHVMHAA 116
P ++E MR+ V + AL AA + VG ++A AAA+ ++HA
Sbjct: 34 PTRLHEAMRYAVLGGGKRVRAALVYAAGQACPVNGSTLAVGASMDRA---AAAVELIHAY 90
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD-NPAGNNSG 175
S +H++LP D +L + +PT++ F T +L DA+ P ELLA PA
Sbjct: 91 SLVHDDLPCMDDDTL-RRGRPTVHVQFDEATAMLAGDALQPLAFELLAGMPIAPA----- 144
Query: 176 RILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHA 235
+++ + RA GSQG+ GQ +L + + + + K G + A
Sbjct: 145 LVVQAAQVLARAAGSQGMAGGQAIDLH---------SVGRMLTRDELQTMHSMKTGAMLA 195
Query: 236 CGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
C G I+ G S + L Y +G+ +V L T + L K A K
Sbjct: 196 CSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGK 248
>gi|92116242|ref|YP_575971.1| polyprenyl synthetase [Nitrobacter hamburgensis X14]
gi|91799136|gb|ABE61511.1| farnesyl-diphosphate synthase [Nitrobacter hamburgensis X14]
Length = 308
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 112/238 (47%), Gaps = 16/238 (6%)
Query: 32 VTMAMSTPNKNKSYWTSVHED---IGAHLRQAVV---VKEPVEVYEPMRHFVFAAPVNMA 85
+T +S+ + K T+ E +G L AV+ + P + + MR+ +
Sbjct: 1 MTSGLSSADFVKRLDTTADETETLLGTLLSDAVLPDEIARPKRLMDAMRYSSLGGGKRLR 60
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
P L V + + G R+ A++A AAL +H S IH++LP D + L + +PT++
Sbjct: 61 PFLVVESSAVFGVPRDSALLAGAALECIHCYSLIHDDLPAMDNSDL-RRGRPTLHKTADD 119
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
T +L D +L +++ + D + + R+L + + RA G G+V GQ +L +
Sbjct: 120 ATAILAGDGLLTLAFDII-TRDEVHQDPAVRLL-LTRALARAAGIGGMVGGQMLDL-AGE 176
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVG 263
DR+ + ++ + K G L G GA+LG S+K+ + L YG +G
Sbjct: 177 GRFGDREPVDVARLQ------QMKTGALLRFGCISGALLGQASQKDYQALDAYGRALG 228
>gi|297203852|ref|ZP_06921249.1| polyprenyl synthatase [Streptomyces sviceus ATCC 29083]
gi|197711907|gb|EDY55941.1| polyprenyl synthatase [Streptomyces sviceus ATCC 29083]
Length = 378
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 19/189 (10%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
PAL V + E+ G E I A A+ ++H S +H++L D + + T++ P
Sbjct: 93 PALAVLSAEVTGAAPETGIPGAVAVELVHNFSLLHDDLMDGDEQR---RHRDTVWKVHGP 149
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
+LV DA+ E+L +GR R + TRA+ ++GQ ++
Sbjct: 150 AQAILVGDALFALANEVLLELGTV---EAGRATRRLTTATRAL-----IDGQAQDISYEH 201
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
D VE E K G L AC ++ GA+LGG ++ + L +YG+++G+
Sbjct: 202 RDR--------VSVEECLEMEGNKTGALLACASSIGAVLGGADDRTADTLEKYGYHLGLA 253
Query: 266 QGIVSRRLG 274
V LG
Sbjct: 254 FQAVDDLLG 262
>gi|282855621|ref|ZP_06264935.1| geranyltranstransferase [Pyramidobacter piscolens W5455]
gi|282586551|gb|EFB91805.1| geranyltranstransferase [Pyramidobacter piscolens W5455]
Length = 297
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 91/200 (45%), Gaps = 12/200 (6%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P + E M + + A + P LC+A E++G E + A A + H AS IH++LP
Sbjct: 30 PARLREAMNYSLLAGGKRLRPILCMAGAEIMGEKAESVLPMATAFEMAHTASLIHDDLPC 89
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D SL + KPT + + + LL DA+ E + G R +R +
Sbjct: 90 MDNDSL-RRGKPTNHVVYGESLALLAGDALFLDAFETALAGLLKNGAEPQRCVRALALFA 148
Query: 186 RAMGSQGVVEGQ-YNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAIL 244
+A+G +G+ GQ + + SQ D+ D + DV + +T L A GAIL
Sbjct: 149 QALGPEGICGGQVLDTDRASQTDERDF----VVDV-ASMKTMVLIRASLCA-----GAIL 198
Query: 245 GGGSEKEIELLRRYGFYVGM 264
G + + L +YG VG+
Sbjct: 199 AGADGEALRRLMKYGENVGL 218
>gi|357127831|ref|XP_003565581.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Brachypodium distachyon]
Length = 383
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 105/220 (47%), Gaps = 7/220 (3%)
Query: 71 EPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTS 130
E MR+ V + + P L +AACE VGG A A A+ ++HA S +H+ +P D +
Sbjct: 112 ESMRYSVLSGGKRVRPVLAIAACEFVGGDAAAAAPVACAVEMVHAMSLVHDEMPCMDDDA 171
Query: 131 LIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAG--NNSGRILRVMVEMTRAM 188
L + +P+ + AF + LL DA+L E LA AG + R LR + E+ A
Sbjct: 172 L-RRGRPSCHAAFGEHAALLAGDALLALAFEHLALGYADAGIVVPAERALRSVAEIANAA 230
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
G GV GQ + C + G+ + + K RL A GAI+GGG+
Sbjct: 231 GIGGVAAGQLADKAC----EGRGSRVGVVSLATLEHVHVHKTARLLEAAAVSGAIVGGGT 286
Query: 249 EKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
E+E +RRY VG++ +V L T EL K A K
Sbjct: 287 GAEVERVRRYARRVGLLFQVVDDVLDVTRTSVELGKTAGK 326
>gi|260881089|ref|ZP_05403580.2| geranyltranstransferase [Mitsuokella multacida DSM 20544]
gi|260849479|gb|EEX69486.1| geranyltranstransferase [Mitsuokella multacida DSM 20544]
Length = 298
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 100/224 (44%), Gaps = 15/224 (6%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVE--VYEPMRHFVFAAPVNMAPALCVAACELVGGHR 100
K W + + L + + + P++ + E MR+ + A + P L +AA + VG
Sbjct: 9 KEIWKERQQLVEKQLVKELEKEPPLDARLAESMRYSLMAGGKRLRPILLMAAADAVGAKG 68
Query: 101 EQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGL 160
+ A AL ++H S IH++LP D + K T + F +L DA+L
Sbjct: 69 TDYLTTACALEMIHTYSLIHDDLPAMDNDD-YRRGKLTNHKVFGDGMAVLAGDALLTLAF 127
Query: 161 ELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVE 220
E++ + + +LR + E++ A G G+V GQ +L+ + +++ +E
Sbjct: 128 EVIGRQQH---TDPATLLRTVQEISTAAGMNGMVGGQAIDLES-----EGHRIS----ME 175
Query: 221 MTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
+ + K G L GAIL G SEK++ L Y G+
Sbjct: 176 QLRKMHMGKTGALFRAALRSGAILAGASEKQLAALTAYAEGFGL 219
>gi|219669510|ref|YP_002459945.1| polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
gi|219539770|gb|ACL21509.1| Polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
Length = 290
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 87/164 (53%), Gaps = 12/164 (7%)
Query: 101 EQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGL 160
E + A AL ++H S IH++LP D + + + F +L DA+L +
Sbjct: 60 EDILPAVCALELIHTYSLIHDDLPAMDNDD-YRRGRLANHKVFGEGQAILAGDALLTYAF 118
Query: 161 ELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVE 220
ELLA +G +S R LR + E+ +A G +G+V GQ +L+ ++++LN + ++E
Sbjct: 119 ELLAQP--MSGVDSQRQLRAVREVAQAAGPEGMVGGQMLDLEA-----EEKQLN-LAELE 170
Query: 221 MTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
+ ++ K G + A GAIL GG+E++IE L Y +G+
Sbjct: 171 ---QVHRLKTGAILVVAARLGAILAGGTEEKIEALTSYAQAIGL 211
>gi|33593755|ref|NP_881399.1| geranyltranstransferase [Bordetella pertussis Tohama I]
gi|384205043|ref|YP_005590782.1| geranyltranstransferase [Bordetella pertussis CS]
gi|410420906|ref|YP_006901355.1| geranyltranstransferase [Bordetella bronchiseptica MO149]
gi|427824861|ref|ZP_18991923.1| probable geranyltranstransferase [Bordetella bronchiseptica Bbr77]
gi|33563828|emb|CAE43072.1| probable geranyltranstransferase [Bordetella pertussis Tohama I]
gi|332383157|gb|AEE68004.1| geranyltranstransferase [Bordetella pertussis CS]
gi|408448201|emb|CCJ59882.1| probable geranyltranstransferase [Bordetella bronchiseptica MO149]
gi|410590126|emb|CCN05205.1| probable geranyltranstransferase [Bordetella bronchiseptica Bbr77]
Length = 303
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 101/233 (43%), Gaps = 28/233 (12%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACEL---------VGGHREQAIVAAAALHVMHAA 116
P ++E MR+ V + AL AA + VG ++A AAA+ ++HA
Sbjct: 34 PTRLHEAMRYAVLGGGKRVRAALVYAAGQACPVNGSTLAVGASMDRA---AAAVELIHAY 90
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD-NPAGNNSG 175
S +H++LP D +L + +PT++ F T +L DA+ P ELLA PA
Sbjct: 91 SLVHDDLPCMDDDTL-RRGRPTVHVQFDEATAMLAGDALQPLAFELLAGMPIAPA----- 144
Query: 176 RILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHA 235
+++ + RA GSQG+ GQ +L + + + + K G + A
Sbjct: 145 LVVQAAQVLARAAGSQGMAGGQAIDLH---------SVGRMLTRDELQTMHSMKTGAMLA 195
Query: 236 CGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
C G I+ G S + L Y +G+ +V L T + L K A K
Sbjct: 196 CSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGK 248
>gi|415885447|ref|ZP_11547375.1| Polyprenyl synthetase [Bacillus methanolicus MGA3]
gi|387591116|gb|EIJ83435.1| Polyprenyl synthetase [Bacillus methanolicus MGA3]
Length = 296
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 104/203 (51%), Gaps = 13/203 (6%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
++ P + E M + + A + P L A G ++ + AAA+ ++H S IH++
Sbjct: 27 LEAPSIIKESMLYSLEAGGKRIRPLLLFATLHAFGKDSKKGLHTAAAIEMIHTYSLIHDD 86
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRI-LRVM 181
LP D + KPT + F +L DA+L + +L+ + P + I L+++
Sbjct: 87 LPSMDNDDF-RRGKPTNHKVFGEAFAVLAGDALLTYSFQLIC--ETPEEYAAADIKLKLI 143
Query: 182 VEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACG 241
E+++A G++G+V G Q + + + ++L+ +T +E + K G+L A G
Sbjct: 144 RELSKAAGAEGMVGG-----QVADIEGEGKQLH-LTQLEYIHH---HKTGKLLAYSVLAG 194
Query: 242 AILGGGSEKEIELLRRYGFYVGM 264
AIL + ++I++L ++ F++G+
Sbjct: 195 AILARANVEQIKVLSQFAFHLGL 217
>gi|225018823|ref|ZP_03708015.1| hypothetical protein CLOSTMETH_02773 [Clostridium methylpentosum
DSM 5476]
gi|224948383|gb|EEG29592.1| hypothetical protein CLOSTMETH_02773 [Clostridium methylpentosum
DSM 5476]
Length = 300
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
V + MR+ V A + P L + C ++GG +A+ A A+ ++H+ S IH++LP D
Sbjct: 37 VVDAMRYSVTAGGKRIRPVLTLEVCRMLGGDPHKALPFACAVELIHSYSLIHDDLPCMDD 96
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
++ + KP+ + AF +T LL DA+L E + + G LR + ++R
Sbjct: 97 DAM-RRGKPSCHIAFGESTALLAGDALLTLAFETASHAPQTHGTGCEETLRAISILSRLA 155
Query: 189 GSQGVVEGQYNELQ 202
G G++ GQ +L+
Sbjct: 156 GVHGMIGGQVIDLE 169
>gi|170761674|ref|YP_001787211.1| geranyltranstransferase [Clostridium botulinum A3 str. Loch Maree]
gi|169408663|gb|ACA57074.1| putative geranyltranstransferase [Clostridium botulinum A3 str.
Loch Maree]
Length = 290
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 94/197 (47%), Gaps = 13/197 (6%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
++YE M + + A + P L + L ++A+ AAA+ ++H S IH++LP D
Sbjct: 28 KIYEAMIYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMD 87
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
L + KPT + F +L DA+L + ++ G + L+ +T+A
Sbjct: 88 NDDL-RRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLKNGEEA---LKACYTITKA 143
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G G++ GQ ++ +D+ ++ ++ Y +KKK G L GAILG
Sbjct: 144 AGVDGMIGGQVVDILS-----EDKSIS----LDELYYMHKKKTGALIKASILAGAILGSA 194
Query: 248 SEKEIELLRRYGFYVGM 264
+ +IELL YG +G+
Sbjct: 195 TYTDIELLGEYGDNLGL 211
>gi|119897490|ref|YP_932703.1| geranyltranstransferase [Azoarcus sp. BH72]
gi|119669903|emb|CAL93816.1| Geranyltranstransferase [Azoarcus sp. BH72]
Length = 300
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 115/259 (44%), Gaps = 18/259 (6%)
Query: 34 MAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPV----EVYEPMRHFVFAAPVNMAPALC 89
M +P ++ ++ + A L A V+ EP ++E MR+ V + P L
Sbjct: 1 MTALSPQDFAAWMGAIQQRTEAAL--AGVLPEPTIAPERLHEAMRYAVLGGGKRVRPLLV 58
Query: 90 VAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTEL 149
AA + G E+ A A+ ++HA S +H+++P D ++ + KPT++ + T L
Sbjct: 59 HAAGAIGGAQPERLDRIACAVELIHAYSLVHDDMPCMD-DDVLRRGKPTVHVEYDDATAL 117
Query: 150 LVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDD 209
LV DA+ ++LAS+ P + R L ++ + A GS+G+ GQ +L D
Sbjct: 118 LVGDALQTLAFQVLASA--PVTDMPTRQLGMIGLLAMASGSRGMAGGQAIDLAAVGRQLD 175
Query: 210 DRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIV 269
R+L + + K G L C GA G + +E L RY G++ +V
Sbjct: 176 LRELEFM---------HIHKTGALIRCSVLLGAQAGTVDGETLERLDRYAKLTGLLFQVV 226
Query: 270 SRRLGPTEEIEELKKLAFK 288
L + L K A K
Sbjct: 227 DDILDAEADTATLGKTAGK 245
>gi|366166849|ref|ZP_09466604.1| farnesyl-diphosphate synthase [Acetivibrio cellulolyticus CD2]
Length = 297
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 26/221 (11%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
VY MR+ + A + P L +A CEL+GG + + A A+ ++H S IH++LP D
Sbjct: 32 VYSAMRYSLLAGGKRLRPVLALAVCELLGGDINEVMPFACAIEMVHTYSLIHDDLPAMDN 91
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL---ASSDNPAGNNSGRILRVMVEMT 185
+ K T + F +L D +L EL+ ++DN NN+ + ++ M +
Sbjct: 92 DDF-RRGKLTNHKKFGEAIAILAGDGLLNLAFELMIESTATDNC--NNAVQKVKAMSYIA 148
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYET----YKKKEGRLHACGAACG 241
++ G G++ GQ + + + E+ YET +K K G L
Sbjct: 149 KSSGIHGMIAGQVIDTESE-------------NKEVAYETLEYMHKCKTGALIKAPVVSS 195
Query: 242 AILGGGSEKEIELLRRYGFYVGMIQGIVSRRL---GPTEEI 279
AI+ SE+++ L Y +G+ I L G TE++
Sbjct: 196 AIICNASEEDLRSLEAYAGNLGLAFQIKDDILDVEGSTEKL 236
>gi|375012653|ref|YP_004989641.1| geranylgeranyl pyrophosphate synthase [Owenweeksia hongkongensis
DSM 17368]
gi|359348577|gb|AEV32996.1| geranylgeranyl pyrophosphate synthase [Owenweeksia hongkongensis
DSM 17368]
Length = 320
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 25/203 (12%)
Query: 65 EPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLP 124
+P+E+YEP+ + + + PAL +AACEL GG ++A+V A + + H S IH++
Sbjct: 23 KPIELYEPISYILSLGGKRLRPALTLAACELFGGDPQEALVPALGIEIFHNFSLIHDD-- 80
Query: 125 LSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEM 184
+ D+ L + K T++ + + +L DAML + + S IL ++++
Sbjct: 81 IMDKAPL-RRGKKTVHEKWNSDVAILSGDAMLVKAYQYIVSV-------KPEILPSVIKV 132
Query: 185 TRAMGSQGVVEGQYNELQCSQCDD---DDRKLNGITDVEMTYETYKKKEGRLHACGAACG 241
+ V EGQ +L DD DD +EM + K L C G
Sbjct: 133 FNQTALE-VCEGQQYDLNFETQDDVLEDDY-------IEMI----RLKTSVLLGCALEIG 180
Query: 242 AILGGGSEKEIELLRRYGFYVGM 264
A++ G S K+ + + +G +G+
Sbjct: 181 ALIAGASVKQADAIYSFGESIGI 203
>gi|288961625|ref|YP_003451935.1| geranyltranstransferase [Azospirillum sp. B510]
gi|288913905|dbj|BAI75391.1| geranyltranstransferase [Azospirillum sp. B510]
Length = 300
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 97/217 (44%), Gaps = 14/217 (6%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
V+E MR+ + P L + + L G + + AI AAAA+ ++H+ S +H++LP D
Sbjct: 38 VFEAMRYGCLNGGKRLRPFLVMQSSALFGVNPDCAIRAAAAVEMVHSYSLVHDDLPAMDD 97
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRI-LRVMVEMTRA 187
L + +PT + F T +L D +L E+LA +PA + I +++ + +A
Sbjct: 98 GEL-RRGRPTCHRQFDEATAILAGDGLLTLAFEVLA---DPATHEDPNIRCQLVTALAKA 153
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G G+V GQ +L + D+ T + K G + A G ILG
Sbjct: 154 AGGHGMVGGQMLDLIAE---------HETFDLGTTTRLQRLKTGEMIAFSCEAGGILGKA 204
Query: 248 SEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
S + LR Y +G+ IV L EE K
Sbjct: 205 SPPQRTALRAYAHDLGLAFQIVDDLLDVEGTAEETGK 241
>gi|298372651|ref|ZP_06982641.1| polyprenyl synthetase [Bacteroidetes oral taxon 274 str. F0058]
gi|298275555|gb|EFI17106.1| polyprenyl synthetase [Bacteroidetes oral taxon 274 str. F0058]
Length = 318
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 52 DIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALH 111
DI +R+ +PV +Y+P+ + + + + P L ACE+ G E AA A+
Sbjct: 4 DIENSIRRIDWHIDPVSLYKPIEYTLDSGGKRLRPMLVAIACEMFGKSSETVENAAVAIE 63
Query: 112 VMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAG 171
+ H + +H++L + D S ++KPT++ + NT +L DAML E LA
Sbjct: 64 IFHNFTLLHDDL-MDD--SPTRRNKPTVHVKWNANTAILSGDAMLIKAYEFLAKIPEKYW 120
Query: 172 NNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEG 231
++L V + + V EGQ Q D D + +T ++ + + K
Sbjct: 121 ---AKVLPVFTQT-----ALEVCEGQ-------QFDMDFETKDNVT-IDEYFRMIRLKTA 164
Query: 232 RLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
L AC GAI+ SE++ L+ G +GM
Sbjct: 165 VLLACSLKTGAIIADASERDQRLIYDLGIAIGM 197
>gi|124267817|ref|YP_001021821.1| farnesyl-diphosphate synthase [Methylibium petroleiphilum PM1]
gi|124260592|gb|ABM95586.1| farnesyl-diphosphate synthase [Methylibium petroleiphilum PM1]
Length = 297
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 107/246 (43%), Gaps = 17/246 (6%)
Query: 51 EDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGG-HREQAIVAAAA 109
E + A L + V P + + MR+ V + P L ++A E VG E A+ AA +
Sbjct: 15 EQVEAALERWVPALAPAGLGDAMRYGVLDGGKRLRPLLVLSAAEAVGATDSEAALRAACS 74
Query: 110 LHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDN- 168
+ ++HA S IH+++P D ++ + KPT++ F +L DAM E+L D+
Sbjct: 75 VELIHAYSLIHDDMPCMD-DDVLRRGKPTVHVKFGQAQAMLAGDAMQALAFEVLTPEDDS 133
Query: 169 -PAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYK 227
P + R+ + RA G G+ GQ +L + D + + ++
Sbjct: 134 VPLALQA----RLCGLLARAAGQDGMAGGQAIDLA---------SIGRPLDEQSLSDMHR 180
Query: 228 KKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAF 287
+K G L GA G S + + L YG +G+ +V L T+ L K A
Sbjct: 181 RKTGALLQASVMMGAACGDASPQARQALSEYGAALGLAFQVVDDILDVTQASSTLGKTAG 240
Query: 288 KLREVN 293
K + N
Sbjct: 241 KDADQN 246
>gi|297569005|ref|YP_003690349.1| Geranyltranstransferase [Desulfurivibrio alkaliphilus AHT2]
gi|296924920|gb|ADH85730.1| Geranyltranstransferase [Desulfurivibrio alkaliphilus AHT2]
Length = 296
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 10/216 (4%)
Query: 71 EPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTS 130
E MR+ + A + P LC+AA E + + AAAL +H S IH++LP D
Sbjct: 34 EAMRYSLLAGGKRIRPILCLAAAEALPTDSRPLLPVAAALECIHTYSLIHDDLPAMDDDD 93
Query: 131 LIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGS 190
L + PT + F +L D +L F ELLA ++G L ++ + A+G
Sbjct: 94 L-RRGNPTCHKKFGEAAAILAGDGLLSFAFELLARPLATKNISAGEQLHLIGNIAAAIGP 152
Query: 191 QGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEK 250
G+V GQ +++ + R++ ++E + ++ K G L GAI GG +
Sbjct: 153 MGMVGGQVLDIEA-----EGRQI----ELEQLQQIHRCKTGALITVAVQSGAIGGGADRR 203
Query: 251 EIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLA 286
+ E L YG +G+ IV L T + L K A
Sbjct: 204 QYEALTSYGEQIGLAFQIVDDLLNVTGDSTTLGKAA 239
>gi|408414645|ref|YP_006625352.1| geranyltranstransferase [Bordetella pertussis 18323]
gi|401776815|emb|CCJ62054.1| probable geranyltranstransferase [Bordetella pertussis 18323]
Length = 303
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 101/233 (43%), Gaps = 28/233 (12%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACEL---------VGGHREQAIVAAAALHVMHAA 116
P ++E MR+ V + AL AA + VG ++A AAA+ ++HA
Sbjct: 34 PTRLHEAMRYAVLGGGKRVRAALVYAAGQACPVNGSTLAVGASMDRA---AAAVELIHAY 90
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD-NPAGNNSG 175
S +H++LP D +L + +PT++ F T +L DA+ P ELLA PA
Sbjct: 91 SLVHDDLPCMDDDTL-RRGRPTVHVQFDEATAMLAGDALQPLAFELLAGMPIAPA----- 144
Query: 176 RILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHA 235
+++ + RA GSQG+ GQ +L + + + + K G + A
Sbjct: 145 LVVQAAQVLARAAGSQGMAGGQAIDLH---------SVGRMLTRDELQTMHSMKTGAMLA 195
Query: 236 CGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
C G I+ G S + L Y +G+ +V L T + L K A K
Sbjct: 196 CSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGK 248
>gi|374293690|ref|YP_005040713.1| farnesyl diphosphate synthase [Azospirillum lipoferum 4B]
gi|357427093|emb|CBS90031.1| farnesyl diphosphate synthase [Azospirillum lipoferum 4B]
Length = 300
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 97/217 (44%), Gaps = 14/217 (6%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
V++ MR+ + P L + + L G + + AI AAA+ ++H+ S IH++LP D
Sbjct: 38 VFDAMRYGCLNGGKRLRPFLVMQSAALFGVNADCAIRVAAAVEMVHSYSLIHDDLPAMDD 97
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRI-LRVMVEMTRA 187
L + +PT + F T +L D +L F E+LA +PA + I +++ + +A
Sbjct: 98 GEL-RRGRPTCHRQFDEATAILAGDGLLTFAFEVLA---DPATHEDPNIRCQLVTALAKA 153
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G G+V GQ +L + D+ T + K G + A G ILG
Sbjct: 154 SGGHGMVGGQMLDLIAE---------HETFDLGTTTRLQRMKTGEMIAYSCEAGGILGKA 204
Query: 248 SEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
+ + LR Y +G+ IV L EE K
Sbjct: 205 NPPQRTALRAYAHDLGLAFQIVDDLLDVEGTAEETGK 241
>gi|316931945|ref|YP_004106927.1| polyprenyl synthetase [Rhodopseudomonas palustris DX-1]
gi|315599659|gb|ADU42194.1| Polyprenyl synthetase [Rhodopseudomonas palustris DX-1]
Length = 308
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 102/222 (45%), Gaps = 10/222 (4%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + E +R+ + P L V + + G R+ A++ AAL +H S IH++
Sbjct: 38 IARPRRLMEAIRYSTLGGGKRLRPFLAVESAAVFGIDRDAALLVGAALECIHCYSLIHDD 97
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D + L + +PT++ A+ T +L DA+L F +++ + D + + R++ V
Sbjct: 98 LPAMDDSDL-RRGRPTLHKAYDDATAILAGDALLTFAFDIV-TRDEVHTDPTVRLMLTRV 155
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+ R G G+V GQ +L + DR+ + ++ + K G L G GA
Sbjct: 156 -LARCAGLGGMVGGQMLDL-AGEGRFGDREPVDVAKLQ------QMKTGALLRYGCVAGA 207
Query: 243 ILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
ILG + ++ L YG +G I L + E L K
Sbjct: 208 ILGQANAEQYRALDDYGRALGEAFQIADDLLDVESDAEALGK 249
>gi|403380864|ref|ZP_10922921.1| polyprenyl synthetase [Paenibacillus sp. JC66]
Length = 301
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 116/253 (45%), Gaps = 12/253 (4%)
Query: 32 VTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVA 91
+T AM+ + ++ V E + L A V +P++ E M + + A + P L +A
Sbjct: 1 MTQAMTIKDYIQNEARFVEEQLRHFLPSAWDVPQPLK--EAMAYSLHAGGKRLRPILVLA 58
Query: 92 ACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLV 151
A E +GG+RE A+ A A+ ++H S IH++LP D + PT + +L
Sbjct: 59 AAESLGGNREAALPIACAVEMVHTYSLIHDDLPALDNDDF-RRGMPTNHKVHGEAMAILA 117
Query: 152 ADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDR 211
DA+L + + + +G + L ++ + G++G+V GQ ++ Q
Sbjct: 118 GDALLTHAFYVASDACLRSGIAPEQGLALIRDFAEFAGARGMVGGQVADMVGEQ------ 171
Query: 212 KLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSR 271
GIT +E + K G L G L +E++++ L ++G +GM I+
Sbjct: 172 ---GITRLEELQYIHTHKTGDLIVFSVKAGGRLANANEEQMKALEKFGRSIGMAFQILDD 228
Query: 272 RLGPTEEIEELKK 284
L T + ++L K
Sbjct: 229 ILDITGDEQKLGK 241
>gi|386843735|ref|YP_006248793.1| polyprenyl synthatase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374104036|gb|AEY92920.1| polyprenyl synthatase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451797027|gb|AGF67076.1| polyprenyl synthatase [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 357
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 19/202 (9%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
PAL V + E+ G E + A A+ ++H S +H++L D + + T++ P
Sbjct: 72 PALAVLSAEVTGAAPEAGVPGAVAVELVHNFSLLHDDLMDGDEQR---RHRDTVWKVHGP 128
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
+LV DA+ E+L +GR R + TRA+ ++GQ ++
Sbjct: 129 AQAILVGDALFALANEVLLELGT---VEAGRATRRLTTATRAL-----IDGQAQDISYEH 180
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
D VE E K G L AC + GA+LGG + + L RYG+++G+
Sbjct: 181 RDR--------VSVEECLEMEGNKTGALLACACSIGAVLGGADDATADALERYGYHLGLA 232
Query: 266 QGIVSRRLGPTEEIEELKKLAF 287
V LG + E K A+
Sbjct: 233 FQAVDDLLGIWGDPEATGKQAW 254
>gi|407782056|ref|ZP_11129271.1| geranyltranstransferase [Oceanibaculum indicum P24]
gi|407206529|gb|EKE76480.1| geranyltranstransferase [Oceanibaculum indicum P24]
Length = 295
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 114/262 (43%), Gaps = 28/262 (10%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
V E MR+ + L + + L R A+ AAA+ +HA S IH++LP D
Sbjct: 32 VVEAMRYSALGGGKRLRAFLVLQSAALFSVSRSCALRVAAAVEFLHAYSLIHDDLPAMDD 91
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRI-LRVMVEMTRA 187
+ L + +P+ + AF T +L DA+L + E+LA + ++ R+ +++ + RA
Sbjct: 92 SDL-RRGRPSCHKAFDEATAVLAGDALLTYAFEVLAQEET---HSDPRVRAELVLALARA 147
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G+QG+V GQ +L D D L IT ++ + K L GAILG
Sbjct: 148 SGTQGMVGGQMLDLLAEDMDSIDASL--ITRLQ------RMKTAELLCFSCEAGAILGKA 199
Query: 248 SEKEIELLRRYGFYVGM----------IQGIVSRRLGPTEEIEELKKLAFKLREVNSFND 297
+ L YG +G+ I+G S PT L A K V +
Sbjct: 200 GKAARHALHSYGQEMGLAFQIADDLLDIEGDSSVTGKPT----GLDDAAGKATLVAALGV 255
Query: 298 ENAEV-IFSLVDDNITHVLGFN 318
ENA LVD + H+ F+
Sbjct: 256 ENARAHALMLVDQSARHLDFFD 277
>gi|312137122|ref|YP_004004459.1| geranylgeranylglyceryl diphosphate synthase [Methanothermus
fervidus DSM 2088]
gi|311224841|gb|ADP77697.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase
[Methanothermus fervidus DSM 2088]
Length = 322
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 125/267 (46%), Gaps = 30/267 (11%)
Query: 53 IGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHV 112
I +R+ + EP E+Y+ H + A + P+L + + E VGG E A+ AA A+ +
Sbjct: 11 IEEEIRKNISDIEPTELYKSSAHLIEAGGKRIRPSLVLLSTESVGGKIEDALNAATAIEL 70
Query: 113 MHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGN 172
+H S IH+++ D + + + T++ + +L D + E++ S+
Sbjct: 71 IHTFSLIHDDIMDKDE---VRRGRATVHVIWGEPLAILAGDVLFSKAFEVMLKSN----I 123
Query: 173 NSGRILRVMVEMTRAMGSQGVVEGQ-YNELQCSQCDDDDRKLNGITDVEMTYETYKKKEG 231
+ R+++V+ MT+A + +GQ Y+ L + +++ +EM Y K
Sbjct: 124 DEKRLVKVLDVMTKA--CVNLCKGQAYDMLFEKNFEVKEKEY-----LEMIY----YKTA 172
Query: 232 RLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGI---------VSRRLGP--TEEIE 280
L A GAI+G GS++EI L YG ++G+ I ++LG +I
Sbjct: 173 SLIAASTKIGAIIGNGSKEEINALYNYGKFLGLAFQIHDDYLDIAGDEKQLGKPVGSDIV 232
Query: 281 ELKKLAFKLREVNSFNDENAEVIFSLV 307
E K ++ +N N E+ E + S++
Sbjct: 233 EGKMTLIAIKALNEANKEDREKLISIL 259
>gi|402836862|ref|ZP_10885393.1| polyprenyl synthetase [Mogibacterium sp. CM50]
gi|402269878|gb|EJU19147.1| polyprenyl synthetase [Mogibacterium sp. CM50]
Length = 297
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 100/221 (45%), Gaps = 17/221 (7%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
+++ M++ V + + P + +AACE GG +A+ A AL +H S IH++LP D
Sbjct: 29 LFDSMKYSVMSGGKRLRPVMLLAACEFSGGDIYEALPFACALEYIHTYSLIHDDLPAMDN 88
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILR---VMVEMT 185
L + PT + F + +L DA+L +E++ ++S ++ R + +
Sbjct: 89 DDL-RRGNPTNHKVFGEDIAVLGGDALLNTAMEVMFRDLTYFFDDSEKLKRHSCAGLTIA 147
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETY--KKKEGRLHACGAACGAI 243
+A G G++ GQ +++ NG+ D + + + K G L A G
Sbjct: 148 KAAGVTGMIAGQVVDVE-----------NGMDDCSQEFVDFIEENKTGALIAAPVIAGLG 196
Query: 244 LGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
+GG ++ I+ Y +G I L T ++EL K
Sbjct: 197 IGGADKEMIDAFTVYSRCIGKAFQISDDILDMTGSVDELGK 237
>gi|57641403|ref|YP_183881.1| bifunctional short-chain isoprenyl diphosphate synthase
[Thermococcus kodakarensis KOD1]
gi|37999032|dbj|BAD00093.1| isoprenyl diphosphate synthase [Thermococcus kodakaraensis]
gi|57159727|dbj|BAD85657.1| bifunctional short-chain isoprenyl diphosphate synthase
[Thermococcus kodakarensis KOD1]
Length = 343
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 109/234 (46%), Gaps = 17/234 (7%)
Query: 51 EDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAAL 110
+D+ + + V KEP+E+Y+ RH+ A + P + + A E VGG E+A+ AA++
Sbjct: 16 KDVDRVILELVPEKEPLELYKAARHYPLAGGKRVRPFVVLRAAEAVGGDPEKALYPAASV 75
Query: 111 HVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPA 170
+H S +H+++ D + + +PT++ + N +L D + E +A ++ PA
Sbjct: 76 EFIHNYSLVHDDIMDMDE---LRRGRPTVHKLWGVNMAILAGDLLFSKAFEAIAKAEVPA 132
Query: 171 GNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKE 230
RIL V+V + + ++ ++ + ++ + ++G K
Sbjct: 133 -EKKARILDVLVRTSNLLCEGQALDIEFETKEEVTVEEYLKMISG-------------KT 178
Query: 231 GRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
G L A GAI+G E+ I L ++G VG+ I L + E+L K
Sbjct: 179 GALFQGSAEIGAIVGTEDEEYIGALSKWGMNVGIAFQIWDDVLDLIADEEKLGK 232
>gi|385330322|ref|YP_005884273.1| geranyltranstransferase [Marinobacter adhaerens HP15]
gi|311693472|gb|ADP96345.1| geranyltranstransferase [Marinobacter adhaerens HP15]
Length = 298
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 74/134 (55%), Gaps = 4/134 (2%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
+ E MR+ V + PALC+AA + +G ++A++ A ++ ++HA S IH++LP D
Sbjct: 36 LQEAMRYSVLGGGKRIRPALCLAAAKAMGQTGDEALIPACSVELIHAYSLIHDDLPAMDD 95
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
L + +PT + AF T +L DA+ LA + P + S R++ V E+ RA
Sbjct: 96 DEL-RRGRPTTHIAFDEATAILAGDALQALAFGWLAEA--PGLSESVRLIMVR-ELARAS 151
Query: 189 GSQGVVEGQYNELQ 202
G G+V GQ +L+
Sbjct: 152 GHGGMVGGQAIDLE 165
>gi|402833960|ref|ZP_10882567.1| geranyltranstransferase [Selenomonas sp. CM52]
gi|402279029|gb|EJU28072.1| geranyltranstransferase [Selenomonas sp. CM52]
Length = 295
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 19/226 (8%)
Query: 43 KSYWTS----VHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGG 98
K+ W V E + L++ E +E + M + + A + P L +AA + VG
Sbjct: 6 KAEWKKRADLVEEGLLRELKKVPAYDETLE--KAMEYSLMAGGKRLRPVLLMAAADAVGK 63
Query: 99 HREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPF 158
+ A+ ++H S IH++LP D + KPT + F +L DA+L
Sbjct: 64 DGAAFLTTGCAIEMIHTYSLIHDDLPAMDNDD-YRRGKPTNHKVFGDGIAVLAGDALLTL 122
Query: 159 GLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITD 218
E++ + A ++ V+ EM+RA G G+V GQ +L+ + R+L D
Sbjct: 123 AFEVMLRQEGAAPET---LVTVVSEMSRAAGPYGMVGGQVLDLEG-----EGRRL----D 170
Query: 219 VEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
+ + + K G L GAIL G E+E+ L Y G+
Sbjct: 171 LAALRKIHMGKTGALFCAAIRSGAILAGAKEEELAALTLYAERFGL 216
>gi|33600896|ref|NP_888456.1| geranyltranstransferase [Bordetella bronchiseptica RB50]
gi|33568496|emb|CAE32408.1| probable geranyltranstransferase [Bordetella bronchiseptica RB50]
Length = 303
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 101/233 (43%), Gaps = 28/233 (12%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACEL---------VGGHREQAIVAAAALHVMHAA 116
P ++E MR+ V + AL AA + VG ++A AAA+ ++HA
Sbjct: 34 PSRLHEAMRYAVLGGGKRVRAALVYAAGQACPVNGSTLAVGASMDRA---AAAVELIHAY 90
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD-NPAGNNSG 175
S +H++LP D +L + +PT++ F T +L DA+ P ELLA PA
Sbjct: 91 SLVHDDLPCMDDDTL-RRGRPTVHVQFDEATAMLAGDALQPLAFELLAGMPIAPA----- 144
Query: 176 RILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHA 235
+++ + RA GSQG+ GQ +L + + + + K G + A
Sbjct: 145 LVVQAAQVLARAAGSQGMAGGQAIDLH---------SVGRMLTRDELQTMHSMKTGAMLA 195
Query: 236 CGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
C G I+ G S + L Y +G+ +V L T + L K A K
Sbjct: 196 CSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGK 248
>gi|296126942|ref|YP_003634194.1| polyprenyl synthetase [Brachyspira murdochii DSM 12563]
gi|296018758|gb|ADG71995.1| Polyprenyl synthetase [Brachyspira murdochii DSM 12563]
Length = 294
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 96/194 (49%), Gaps = 15/194 (7%)
Query: 71 EPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTS 130
E +++ + A + P L + ACEL G ++A++ A +L ++H S +H++LP D
Sbjct: 35 EMLKYPLDAGGKRLRPVLTLLACELFEGDYKKAVIPAVSLELIHTYSLVHDDLPAMDNDD 94
Query: 131 LIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGS 190
L + KPT + + +LV D +L +LL+ +D + +++ E++ A G
Sbjct: 95 L-RRGKPTTHVKYGEANAILVGDGLLTHAFQLLSKADVK----DSTLRKLLFELSYAAGI 149
Query: 191 QGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEK 250
G+V GQ+ +L + +++N +M + KK + GAI ++
Sbjct: 150 NGMVMGQFIDLYYEE-----KEIN----FDMLKVLHAKKTAAMIRGAVRLGAI-SSENDN 199
Query: 251 EIELLRRYGFYVGM 264
+IE + +YG +G+
Sbjct: 200 DIENITKYGEAIGL 213
>gi|260887337|ref|ZP_05898600.1| geranyltranstransferase [Selenomonas sputigena ATCC 35185]
gi|330838910|ref|YP_004413490.1| Polyprenyl synthetase [Selenomonas sputigena ATCC 35185]
gi|260862973|gb|EEX77473.1| geranyltranstransferase [Selenomonas sputigena ATCC 35185]
gi|329746674|gb|AEC00031.1| Polyprenyl synthetase [Selenomonas sputigena ATCC 35185]
Length = 295
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 19/226 (8%)
Query: 43 KSYWTS----VHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGG 98
K+ W V E + L++ E +E + M + + A + P L +AA + VG
Sbjct: 6 KAEWKKRADLVEEGLLRELKKVPAYDETLE--KAMEYSLMAGGKRLRPVLLMAAADAVGK 63
Query: 99 HREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPF 158
+ A+ ++H S IH++LP D + KPT + F +L DA+L
Sbjct: 64 DGAAFLTTGCAIEMIHTYSLIHDDLPAMDNDD-YRRGKPTNHKVFGDGIAVLAGDALLTL 122
Query: 159 GLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITD 218
E++ + A ++ V+ EM+RA G G+V GQ +L+ + R+L D
Sbjct: 123 AFEVMLRQEGAAPET---LVTVVSEMSRAAGPYGMVGGQVLDLEG-----EGRRL----D 170
Query: 219 VEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
+ + + K G L GAIL G E+E+ L Y G+
Sbjct: 171 LAALRKIHMGKTGALFCAAIRSGAILAGAKEEELAALTLYAERFGL 216
>gi|152976582|ref|YP_001376099.1| polyprenyl synthetase [Bacillus cytotoxicus NVH 391-98]
gi|152025334|gb|ABS23104.1| Polyprenyl synthetase [Bacillus cytotoxicus NVH 391-98]
Length = 297
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 107/225 (47%), Gaps = 14/225 (6%)
Query: 58 RQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAAS 117
R A ++ P + + M + + A + P L A G RE I AA AL ++H S
Sbjct: 23 RYANELQCPNVLRDAMTYSLEAGGKRLRPLLLFATLHAFGKERELGIGAACALEMIHTYS 82
Query: 118 FIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRI 177
IH++LP D L + KPT + F +L D +L + +++ S+ N G +S
Sbjct: 83 LIHDDLPCMDDDDL-RRGKPTNHKVFGEAMAVLAGDGLLTYAFQVV-SAYNYEGISSEIK 140
Query: 178 LRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACG 237
LR+ +E+ +A G +G+V GQ +++ +T E+ Y +K K GRL
Sbjct: 141 LRLALELAKAAGPEGMVAGQVADMEAEG--------KHLTLNELEY-IHKHKTGRLLEFA 191
Query: 238 AACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRL---GPTEEI 279
GAIL G +++E E L + YVG+ I L G EEI
Sbjct: 192 VLAGAILAGATKEEEEKLLAFAKYVGLAFQIRDDILDVEGTEEEI 236
>gi|374367607|ref|ZP_09625668.1| geranyltranstransferase [Cupriavidus basilensis OR16]
gi|373100910|gb|EHP41970.1| geranyltranstransferase [Cupriavidus basilensis OR16]
Length = 306
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 109/233 (46%), Gaps = 14/233 (6%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++E MR+ V + P L AA E+ G E AA+A+ ++HA S +H+++P
Sbjct: 39 PCTLHEAMRYAVLGGGKRVRPLLVHAAGEVAGAAPESCDAAASAVEMIHAYSLVHDDMPC 98
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D L + +PT++ A+ T LLV DA+ +LA S + A ++ +R++ E+
Sbjct: 99 MDDDDL-RRGRPTVHKAYDEATALLVGDALQTQAFVVLAESASLASLDAAARMRLVAELA 157
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
RA GS G+ GQ +LQ +L G+ ++ K G L GA G
Sbjct: 158 RASGSVGMAGGQAIDLQHVGLAMSLEELEGM---------HRMKTGALLRASVRMGAYCG 208
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVNSFNDE 298
E + L RY VG+ +V L T + L K A K ++ ND+
Sbjct: 209 AVDEAGLAALDRYAAAVGLAFQVVDDILDVTADTATLGKTAGK----DAANDK 257
>gi|422322210|ref|ZP_16403252.1| geranyltranstransferase [Achromobacter xylosoxidans C54]
gi|317402859|gb|EFV83401.1| geranyltranstransferase [Achromobacter xylosoxidans C54]
Length = 303
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 102/228 (44%), Gaps = 26/228 (11%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAA---CELVGG--HREQAI-VAAAALHVMHAASFI 119
P ++E MR+ V + AL AA C + G E ++ AAAA+ ++HA S +
Sbjct: 34 PARLHEAMRYAVLGGGKRVRAALVYAAGQACPVSGSVLAVEASLDRAAAAVELIHAYSLV 93
Query: 120 HENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD-NPAGNNSGRIL 178
H++LP D ++ + +PT + F T +L DA+ P ELLAS PA I+
Sbjct: 94 HDDLPCMD-DDVLRRGRPTTHVQFDEATAMLAGDALQPLAFELLASMPIAPA-----LIV 147
Query: 179 RVMVEMTRAMGSQGVVEGQYNELQC--SQCDDDDRKLNGITDVEMTYETYKKKEGRLHAC 236
+ + RA GSQG+ GQ +L DD +L + K G + AC
Sbjct: 148 QATQSLARAAGSQGMAGGQAIDLFSVGRSLSRDDLQL-----------MHSMKTGAMLAC 196
Query: 237 GAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
A G I+ G S + L Y +G+ +V L T + L K
Sbjct: 197 SVALGGIVAGASSASRQALDVYAQAMGLAFQVVDDILDVTADSASLGK 244
>gi|317484629|ref|ZP_07943532.1| polyprenyl synthetase [Bilophila wadsworthia 3_1_6]
gi|316924103|gb|EFV45286.1| polyprenyl synthetase [Bilophila wadsworthia 3_1_6]
Length = 302
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 122/257 (47%), Gaps = 23/257 (8%)
Query: 36 MSTPNKNKSYWTSVHE---DIGAHLRQAV-VVKEPVEVYEPMRHFVFAAPVNMAPALCVA 91
MSTP ++ T + E + A+L+ + + + E M + + A + P LC++
Sbjct: 1 MSTPYDSQQVKTILAERGAQVEAYLQHCLDAIPMQGRLKEAMYYSLLAGGKRLRPVLCLS 60
Query: 92 ACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLV 151
L G E + AA+L ++H S IH++LP D L + +P+ + AF T +L
Sbjct: 61 TAALFGLSAEAVMPFAASLEMIHTYSLIHDDLPAMDDDDL-RRGRPSCHKAFDEATAILA 119
Query: 152 ADAMLPFGLELLASS--DNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDD 209
DA+L +AS+ D PA GR+L + ++ A GS G+V GQ ++ C+
Sbjct: 120 GDALLTDAFGFMASTVKDLPA----GRVLEALASVSSAAGSAGMVGGQILDMDCT----- 170
Query: 210 DRKLNGITDVEM-TYET-YKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQG 267
G T+V + T +T + K G + G +L G SE +I LR YG +G+
Sbjct: 171 -----GKTNVPLETLQTLHALKTGAMFRVACVSGGLLAGASESDIASLRAYGEALGVTFQ 225
Query: 268 IVSRRLGPTEEIEELKK 284
IV L T + L K
Sbjct: 226 IVDDILDETADTATLGK 242
>gi|239814577|ref|YP_002943487.1| polyprenyl synthetase [Variovorax paradoxus S110]
gi|239801154|gb|ACS18221.1| Polyprenyl synthetase [Variovorax paradoxus S110]
Length = 305
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 115/262 (43%), Gaps = 16/262 (6%)
Query: 30 MMVTMAMSTPNKNKSYWTSVH-EDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPAL 88
M A+ + W+ H + A L + V V PV + + MR+ V + P L
Sbjct: 1 MSAVQAVEWDAARLASWSDPHLARVEAALSRWVGVDAPVLLGDAMRYAVLDGGKRLRPLL 60
Query: 89 CVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTE 148
+AA E VGG+ A+ AA A ++HA S +H++LP D ++ + KPT++ F
Sbjct: 61 VLAASEAVGGNAAAALRAACATELIHAYSLVHDDLPSMD-NDVLRRGKPTVHVKFGEADA 119
Query: 149 LLVADAMLPFGLELLA-SSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCD 207
LL DA+ ELL D + + R+ + RA GSQG+ GQ +L
Sbjct: 120 LLAGDALQALAFELLTPEGDEIPASIQAALCRL---LARAAGSQGMAGGQAIDLASVGLA 176
Query: 208 DDDRKLNGITDVEMTYETYKKKEGRLHACGAACG-AILGGGSEKEIELLRRYGFYVGMIQ 266
D+ +L E ++ K G L G A G + + LR YG +G+
Sbjct: 177 LDEAQLR---------EMHRLKTGALLQGSVEMGAACAGAVAPAALSALRDYGAAIGLAF 227
Query: 267 GIVSRRLGPTEEIEELKKLAFK 288
+V L T + + L K A K
Sbjct: 228 QVVDDILDVTADSQTLGKTAGK 249
>gi|430748056|ref|YP_007207185.1| geranylgeranyl pyrophosphate synthase [Singulisphaera acidiphila
DSM 18658]
gi|430019776|gb|AGA31490.1| geranylgeranyl pyrophosphate synthase [Singulisphaera acidiphila
DSM 18658]
Length = 340
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 109/265 (41%), Gaps = 27/265 (10%)
Query: 11 PAHVAPRRNHSRPSLSYRPMMVTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKE----- 65
P H RNH PMM + ++ + + S+ + LR+ + E
Sbjct: 23 PRHRLAARNH-------LPMMTSRSIES-SPPASFIEEARRQVDEALRRYLPASEDAGAL 74
Query: 66 -PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLP 124
P + E MR+ V + P LC+ A E G A+ AA AL ++H S IH++LP
Sbjct: 75 CPPRLSEAMRYSVLGGGKRLRPILCLLAAEACGADPSAALPAACALELVHTYSLIHDDLP 134
Query: 125 LSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEM 184
D L + +PT + AF T +L D +L E+LA PA + + +
Sbjct: 135 AMDDDDLR-RGRPTCHKAFDEATAVLAGDGLLTLAFEILAQHVRPAEAA----VACVQAL 189
Query: 185 TRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAIL 244
G G+V GQ +L+ +D +E +++K G L G ++
Sbjct: 190 AEGAGPSGMVGGQMADLEAEGRND--------PSLEALESIHRRKTGALLRASLRMGGLV 241
Query: 245 GGGSEKEIELLRRYGFYVGMIQGIV 269
G E + L YG VG+ I+
Sbjct: 242 AGADETSLHALNIYGGAVGLAFQII 266
>gi|387929669|ref|ZP_10132346.1| farnesyl diphosphate synthase [Bacillus methanolicus PB1]
gi|387586487|gb|EIJ78811.1| farnesyl diphosphate synthase [Bacillus methanolicus PB1]
Length = 297
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 98/199 (49%), Gaps = 11/199 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P + E M + + A + P L A +G ++ + AAA+ ++H S IH++LP
Sbjct: 31 PSIIKESMLYSLEAGGKRIRPLLLFATLHALGHDSKKGLNTAAAIEMIHTYSLIHDDLPS 90
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D + KPT + F +L DA+L + ++++ + + L ++ E++
Sbjct: 91 MDNDDF-RRGKPTNHKVFGEAFAVLAGDALLTYSFQMISETPEEYAAADTK-LNLIRELS 148
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
+A G++G+V GQ +++ D +L I + K G+L A GA+L
Sbjct: 149 KAAGAEGMVGGQAADIEGEGKQLDLSQLEYI---------HHHKTGKLLAYSVLAGAMLA 199
Query: 246 GGSEKEIELLRRYGFYVGM 264
G ++++++ L ++ F++G+
Sbjct: 200 GANDEQMKDLSQFAFHLGL 218
>gi|293604269|ref|ZP_06686676.1| geranyltranstransferase [Achromobacter piechaudii ATCC 43553]
gi|292817146|gb|EFF76220.1| geranyltranstransferase [Achromobacter piechaudii ATCC 43553]
Length = 303
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 22/226 (9%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAA---CELVGG--HREQAI-VAAAALHVMHAASFI 119
PV ++E MR+ V + A+ AA C + G E ++ AAAA+ ++HA S +
Sbjct: 34 PVRLHEAMRYAVLGGGKRVRAAMVYAAGQACPVSGSVLAIEASLDRAAAAVELIHAYSLV 93
Query: 120 HENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD-NPAGNNSGRIL 178
H++LP D +L + +PT + F T +L DA+ P +LLAS PA I+
Sbjct: 94 HDDLPCMDNDTL-RRGRPTTHVQFDEATAMLAGDALQPLAFDLLASMPIAPA-----LIV 147
Query: 179 RVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGA 238
+ + RA GSQG+ GQ +L +L + + K G + AC
Sbjct: 148 QATQSLARAAGSQGMAGGQAIDLLSVGHSLSRDELQTM---------HSMKTGAMLACSV 198
Query: 239 ACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
A G I+ G S + L Y +G+ +V L T + L K
Sbjct: 199 ALGGIVAGASSASRQALDAYAQAMGLAFQVVDDILDVTADTASLGK 244
>gi|254442247|ref|ZP_05055723.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
DG1235]
gi|198256555|gb|EDY80863.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
DG1235]
Length = 292
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 106/243 (43%), Gaps = 16/243 (6%)
Query: 36 MSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACEL 95
M K ++Y + + + +L P ++E M + + A + P L +A+ EL
Sbjct: 1 MEFKEKLRTYQSEIESAVDQYL--PAEATRPSRIHEAMLYSMRAGGKRLRPVLVLASKEL 58
Query: 96 VGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAM 155
+ A+ AA A+ +H S IH++LP D L + KPT + F T +L DA+
Sbjct: 59 FDSELD-AMPAAIAVECLHTYSLIHDDLPSIDDGDL-RRGKPTSHKQFDEATAVLAGDAL 116
Query: 156 LPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNG 215
L + +LLA N ++ E+ GS+ ++ GQ ++ + LN
Sbjct: 117 LAYAFQLLARH---FANAPDVCANLVGELGETAGSERLIGGQMEDILGEGGPLSEDTLNF 173
Query: 216 ITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGP 275
I + K L C G I+GG + ++I+ LR YG +G+ I+ L
Sbjct: 174 I---------HLNKTSALIECCLVMGGIIGGANYEQIDALRTYGREIGIAFQIIDDILDA 224
Query: 276 TEE 278
T +
Sbjct: 225 TSD 227
>gi|153939221|ref|YP_001391205.1| geranyltranstransferase [Clostridium botulinum F str. Langeland]
gi|152935117|gb|ABS40615.1| geranyltranstransferase [Clostridium botulinum F str. Langeland]
Length = 290
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 13/197 (6%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
++YE M + + A + P L + L ++A+ AAA+ ++H S IH++LP D
Sbjct: 28 KIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMD 87
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
L + KPT + F +L DA+L + ++ + N + L+ + +A
Sbjct: 88 NDDL-RRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEY---SLKNGEKALKACYTIAKA 143
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G G++ GQ ++ +D+ ++ ++ Y +KKK G L GAILG
Sbjct: 144 AGVDGMIGGQVVDILS-----EDKSIS----LDELYYMHKKKTGALIKASILAGAILGSA 194
Query: 248 SEKEIELLRRYGFYVGM 264
+ +IELL YG +G+
Sbjct: 195 TYTDIELLGEYGDNLGL 211
>gi|326790848|ref|YP_004308669.1| farnesyltranstransferase [Clostridium lentocellum DSM 5427]
gi|326541612|gb|ADZ83471.1| Farnesyltranstransferase [Clostridium lentocellum DSM 5427]
Length = 291
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 14/220 (6%)
Query: 66 PVE-VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLP 124
P E +Y+ M + + A + P L A E VGG + + + ++H S IH++LP
Sbjct: 26 PFENLYKAMNYSLLAGGKRIRPVLMQLAYEAVGG-KAEIDAYLCGIEMIHTYSLIHDDLP 84
Query: 125 LSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEM 184
+ K T + F T +L DA+L L+ ++ ++S +R + +
Sbjct: 85 AM-DDDDYRRGKLTNHKVFGEATAILAGDALLNDAFCLML--EDALKSDSMEKVRAIHVL 141
Query: 185 TRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAIL 244
+ A GS G++ GQ +++ D L+ I + K G L + GAIL
Sbjct: 142 SMASGSAGMIGGQILDMESENKAIDQDTLDLI---------HLNKTGALISAATKMGAIL 192
Query: 245 GGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
GGGS +E+ LL YG Y+G + IV L T IEEL K
Sbjct: 193 GGGSPREVSLLEAYGKYIGKVFQIVDDILDQTSTIEELGK 232
>gi|212223283|ref|YP_002306519.1| bifunctional short-chain isoprenyl diphosphate synthase
[Thermococcus onnurineus NA1]
gi|212008240|gb|ACJ15622.1| bifunctional short-chain isoprenyl diphosphate synthase
[Thermococcus onnurineus NA1]
Length = 342
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 27/226 (11%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
+EP ++Y+ RH+ A + P + + A E VGG +A+ AAA+ ++H S +H+++
Sbjct: 29 REPRKLYDAARHYPLAGGKRVRPFVVLRAAEAVGGDPSKALYPAAAVELIHNYSLVHDDI 88
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD-NPAGNNSGRILRVMV 182
D + + +PT++ + N +L D + E +A ++ +P RIL V+V
Sbjct: 89 MDMDE---LRRGRPTVHKVWGINMAILAGDLLFSKAFEAVARAEISP--EKKARILEVLV 143
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKK----KEGRLHACGA 238
+ S + EGQ +++ T E+T + Y + K G L A
Sbjct: 144 QT-----SNELCEGQALDIEFE------------TREEVTVDEYLQMISGKTGALFDGSA 186
Query: 239 ACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
GAI+G +E+ I+ L ++G VG+ I L + E+L K
Sbjct: 187 TIGAIVGTDNEEYIQALSKWGRNVGIAFQIWDDVLDLIADEEKLGK 232
>gi|333987631|ref|YP_004520238.1| Dimethylallyltranstransferase [Methanobacterium sp. SWAN-1]
gi|333825775|gb|AEG18437.1| Dimethylallyltranstransferase [Methanobacterium sp. SWAN-1]
Length = 328
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 18/222 (8%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K Y T V E+I L +P ++ + H + A + PAL + C+ VGG+ E+
Sbjct: 8 KKYSTIVDEEIDKSLNTV----DPEKLQKASEHLIKAGGKKIRPALVILTCQAVGGNVEE 63
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
A+ AAA+ ++H S IH+++ D + + KP+++ + +L D + E
Sbjct: 64 ALKTAAAVELIHTFSLIHDDIMDEDN---MRRGKPSVHVLWGEPMAILAGDTLFSKAFET 120
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+ + G + R++ + T + EGQ ++ C + + D + + E
Sbjct: 121 ILET-RIDGVSYERVVGTL--KTVVDSCTKICEGQAFDM-CFEGNFD------VAEEEYM 170
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
Y K G L A GAI+GGGS +++E L YG +G+
Sbjct: 171 QMIYMKT-GALIAAATKSGAIVGGGSPEQVEALAEYGRLIGL 211
>gi|421152012|ref|ZP_15611604.1| geranyltranstransferase [Pseudomonas aeruginosa ATCC 14886]
gi|404526144|gb|EKA36376.1| geranyltranstransferase [Pseudomonas aeruginosa ATCC 14886]
Length = 295
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
+E +YE MR+ V + P L AACE +GG ++A AA A+ ++HA S +H++L
Sbjct: 26 EELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDL 85
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASS-DNPAGNNSGRILRVMV 182
P D L + +PT + AF T +L AD + E+LA + NP L ++
Sbjct: 86 PAMDDDDL-RRGQPTTHRAFDEATAILAADGLQALAFEVLADTRRNP--QEHAVCLEMLT 142
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYET-YKKKEGRLHACGAACG 241
+ RA GS G+V GQ +L G+T + E ++ K G L G
Sbjct: 143 RLARAAGSAGMVGGQAIDLGSV----------GVTLDQAALEVMHRHKTGALIEASVRLG 192
Query: 242 AILGGGSE-KEIELLRRYGFYVGM 264
A+ G +E + L RY +G+
Sbjct: 193 ALASGRAEPASLAALERYAEAIGL 216
>gi|455648858|gb|EMF27698.1| polyprenyl synthatase [Streptomyces gancidicus BKS 13-15]
Length = 342
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 19/189 (10%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
PAL V + E+ G E + A A+ ++H S +H++L D + + T++ P
Sbjct: 57 PALAVLSAEVTGAAPETGVPGAVAVELVHNFSLLHDDLMDGDEQR---RHRDTVWKVHGP 113
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
+LV DA+ E+L +GR R + +RA+ ++GQ ++
Sbjct: 114 AQAILVGDALFALANEVLLELGTV---EAGRATRRLTRASRAL-----IDGQAQDISYEH 165
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
D VE E K G L AC ++ GA+LGG E+ + L RYG ++G+
Sbjct: 166 RDR--------VSVEECLEMEGNKTGALLACASSIGAVLGGADERTADALERYGHHLGLA 217
Query: 266 QGIVSRRLG 274
V LG
Sbjct: 218 FQAVDDLLG 226
>gi|392426568|ref|YP_006467562.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus
acidiphilus SJ4]
gi|391356531|gb|AFM42230.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus
acidiphilus SJ4]
Length = 291
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 84/164 (51%), Gaps = 13/164 (7%)
Query: 101 EQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGL 160
E+ + AA AL ++H S IH++LP D + + + + F +L D +L +
Sbjct: 62 EKILPAAIALELIHTYSLIHDDLPAMDNDD-YRRGRLSNHKVFGEANAILAGDGLLTYAF 120
Query: 161 ELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVE 220
E LA +P + LRV+ E+ A G G+V GQ ++ +++KL+ +T++E
Sbjct: 121 EFLA---DPILGQPEKQLRVIREVAAAAGKNGMVGGQVLDIAG-----EEKKLS-LTEIE 171
Query: 221 MTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
E +K K G L A G IL GGSE++IE L Y +G+
Sbjct: 172 ---EIHKAKTGALLIASARLGGILAGGSEEQIEALTNYAQALGL 212
>gi|429246185|ref|ZP_19209527.1| geranyltranstransferase [Clostridium botulinum CFSAN001628]
gi|428756789|gb|EKX79319.1| geranyltranstransferase [Clostridium botulinum CFSAN001628]
Length = 290
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 93/197 (47%), Gaps = 13/197 (6%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
++YE M + + A + P L + L ++A+ AAA+ ++H S IH++LP D
Sbjct: 28 KIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMD 87
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
L + KPT + F +L DA+L + ++ + N + L+ + +A
Sbjct: 88 NDDL-RRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEY---SLKNGEKALKACYTIAKA 143
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G G++ GQ ++ +D+ + ++ Y +KKK G L GAILG
Sbjct: 144 AGVDGMIGGQVVDILS-----EDKSIT----LDELYYMHKKKTGALIKASILAGAILGSA 194
Query: 248 SEKEIELLRRYGFYVGM 264
+ +IELL YG +G+
Sbjct: 195 TYTDIELLGEYGDNLGL 211
>gi|319899404|ref|YP_004159501.1| geranyltranstransferase [Bartonella clarridgeiae 73]
gi|319403372|emb|CBI76931.1| geranyltranstransferase [Bartonella clarridgeiae 73]
Length = 301
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 107/239 (44%), Gaps = 11/239 (4%)
Query: 55 AHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMH 114
+H Q + P + MRH V + P L + + + E ++ AL +H
Sbjct: 24 SHKAQNGEITRPEILINAMRHGVLNGGKRLRPFLVIQSAAIFDIPPEHSLDIGVALECLH 83
Query: 115 AASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNS 174
S IH++LP D +L + KPT++ AF T +L +A+L F E++A + + +
Sbjct: 84 CYSLIHDDLPALDNDTL-RRGKPTVHVAFDEATAILAGNALLTFAFEIIAHKEAYSFSPK 142
Query: 175 GRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLH 234
+I ++ +T+A G G++ GQ +L+ + D+ +T + K
Sbjct: 143 TKI-DLITALTQAAGLGGMIGGQMLDLEAEKKPQDE-------SATITLQQMKTAALMRF 194
Query: 235 ACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVN 293
AC A GAI+G S+ + L +G +G+ + L + + L K A K + N
Sbjct: 195 ACQA--GAIMGQASKTLTDKLASFGTQIGLAFQLTDDLLDLVSQTKILGKTAGKDQTAN 251
>gi|168335575|ref|ZP_02693638.1| Polyprenyl synthetase [Epulopiscium sp. 'N.t. morphotype B']
Length = 288
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 94/224 (41%), Gaps = 21/224 (9%)
Query: 65 EPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLP 124
E + E MR+ V + P L A E VGG A A + +H S IH++LP
Sbjct: 23 ECTRLQEAMRYSVLQGGKRIRPILMRLAYEAVGGTGNIAPYMCA-IEFVHTYSLIHDDLP 81
Query: 125 LSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL----LASSDNPAGNNSGRILRV 180
D +L + PT + F T +L D +L E+ L S +PA + IL
Sbjct: 82 AMDNDAL-RRGLPTNHVKFDEATAILAGDGLLTLAFEIMLQDLVSDMDPAKAIAANIL-- 138
Query: 181 MVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAAC 240
G+ G+V GQ ++ + +EM + K G L
Sbjct: 139 ----ATGAGASGMVLGQMYDMFYEGKE---------ISIEMLEKIQLNKTGALIKSALKM 185
Query: 241 GAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
GA+LG GSE E+ L YG Y+G + I+ L T ++ EL K
Sbjct: 186 GAVLGYGSESELFALELYGIYLGKVFQIIDDILDITGQVNELGK 229
>gi|424844831|ref|ZP_18269442.1| geranylgeranyl pyrophosphate synthase [Jonquetella anthropi DSM
22815]
gi|363986269|gb|EHM13099.1| geranylgeranyl pyrophosphate synthase [Jonquetella anthropi DSM
22815]
Length = 299
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 91/228 (39%), Gaps = 9/228 (3%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++E M + + A + P LC L G E A AL ++H AS IH++LP
Sbjct: 32 PPRLWEAMCYSLEAGGKRIRPVLCQEGARLAGVKAEDTFPMALALEMVHTASLIHDDLPC 91
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D SL + KPT + F + LL DA+L FG + + R++R M
Sbjct: 92 MDNDSL-RRGKPTNHSVFGESLALLAGDALLCFGFQTALEGLKARKIETKRVVRAMELFA 150
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
A+G QG+ GQ D D + D+ K L C CG LG
Sbjct: 151 SALGPQGMCGGQTL--------DTDLQSRASCDLPFVQSMASGKTMALIRCSVLCGLCLG 202
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVN 293
+ E L YG +G+ I L T EE K K E +
Sbjct: 203 ERGDALTERLDEYGRRLGLAFQIADDLLDATATTEEAGKTTGKDEEQD 250
>gi|188994672|ref|YP_001928924.1| isoprenyl synthetase [Porphyromonas gingivalis ATCC 33277]
gi|188594352|dbj|BAG33327.1| probable isoprenyl synthetase [Porphyromonas gingivalis ATCC 33277]
Length = 325
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 99/201 (49%), Gaps = 19/201 (9%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
++P +++P+ + + + P L ACE+ GG + A+ A A+ H + +H++
Sbjct: 23 RKPDGLFQPISYILRLGGKRVRPTLACIACEMFGGDYKPALEVAMAIETYHNFTLLHDD- 81
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE 183
L D++S+ + K T++H + NT +L DAM E LA D+ R+L V++
Sbjct: 82 -LMDKSSM-RRGKETVHHRWGDNTAILSGDAMTVAAYEHLAKVDS-------RLLPVLLP 132
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAI 243
+ M + + +GQ Q D D + + + + E E + K L A GAI
Sbjct: 133 LFNRMAME-ICQGQ-------QYDMDFERRDFVAEDEYL-EMIRLKTAVLLATALKMGAI 183
Query: 244 LGGGSEKEIELLRRYGFYVGM 264
GG ++ ++L RYG ++G+
Sbjct: 184 AGGADIEKADILYRYGIHIGL 204
>gi|163753596|ref|ZP_02160719.1| putative isoprenyl synthetase [Kordia algicida OT-1]
gi|161325810|gb|EDP97136.1| putative isoprenyl synthetase [Kordia algicida OT-1]
Length = 324
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 121/273 (44%), Gaps = 33/273 (12%)
Query: 55 AHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMH 114
++L + V V EP +YEP+ + + + P L + E+ G ++A+ AA A+ V H
Sbjct: 13 SYLEEKVTVSEPKNLYEPIIYILQLGGKRLRPVLTLMTAEIFGASPQKALDAALAVEVFH 72
Query: 115 AASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNS 174
S +H+++ + D + + + K T++ + NT +L DAML +L N
Sbjct: 73 NFSLVHDDI-MDD--APLRRGKETVHEKWDINTGILSGDAMLILAYQLFE-------NYK 122
Query: 175 GRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLH 234
G+ R + E+ + V EGQ Q D D N +T E + + K L
Sbjct: 123 GKTFRALAELFSKTAIE-VCEGQ-------QYDIDFETRNDVTIPEYL-KMIEYKTAVLV 173
Query: 235 ACGAACGAILGGGSEKEIELLRRYGFYVGM---IQGIVSRRLGPTE--------EIEELK 283
GA++ SEK+ + + +G Y+G+ +Q G E +I E K
Sbjct: 174 GAAMKMGALVAEASEKDAQGIYDFGRYLGLAFQLQDDYLDAYGDPETFGKQVGGDIIENK 233
Query: 284 KLAFKLREVNSFNDENAE---VIFSLVDDNITH 313
K L+ + + +D N E +FS+ D+ T
Sbjct: 234 KTYLYLKALQNASDANKEKLTQLFSVQPDDTTE 266
>gi|34540567|ref|NP_905046.1| polyprenyl synthetase [Porphyromonas gingivalis W83]
gi|419970274|ref|ZP_14485777.1| polyprenyl synthetase [Porphyromonas gingivalis W50]
gi|34396880|gb|AAQ65945.1| polyprenyl synthetase [Porphyromonas gingivalis W83]
gi|392611178|gb|EIW93925.1| polyprenyl synthetase [Porphyromonas gingivalis W50]
Length = 325
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 99/201 (49%), Gaps = 19/201 (9%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
++P +++P+ + + + P L ACE+ GG + A+ A A+ H + +H++
Sbjct: 23 RKPDGLFQPISYILRLGGKRVRPTLACIACEMFGGDYKPALEVAMAIETYHNFTLLHDD- 81
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE 183
L D++S+ + K T++H + NT +L DAM E LA D+ R+L V++
Sbjct: 82 -LMDKSSM-RRGKETVHHRWGDNTAILSGDAMTVAAYEHLAKVDS-------RLLPVLLP 132
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAI 243
+ M + + +GQ Q D D + + + + E E + K L A GAI
Sbjct: 133 LFNRMAME-ICQGQ-------QYDMDFERRDFVAEDEYL-EMIRLKTAVLLATALKMGAI 183
Query: 244 LGGGSEKEIELLRRYGFYVGM 264
GG ++ ++L RYG ++G+
Sbjct: 184 AGGADIEKADILYRYGIHIGL 204
>gi|311105029|ref|YP_003977882.1| geranyltranstransferase [Achromobacter xylosoxidans A8]
gi|310759718|gb|ADP15167.1| geranyltranstransferase [Achromobacter xylosoxidans A8]
Length = 303
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 103/226 (45%), Gaps = 22/226 (9%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAA---CELVGGHRE-QAIV--AAAALHVMHAASFI 119
P ++E MR+ V + AL AA C + G QA + AAAA+ ++HA S +
Sbjct: 34 PSRLHEAMRYAVLGGGKRVRAALVYAAGQACPVSGSVLAVQASLDRAAAAVELIHAYSLV 93
Query: 120 HENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD-NPAGNNSGRIL 178
H++LP D +L + +PT + F T +L DA+ P +LLAS PA I+
Sbjct: 94 HDDLPCMDDDTL-RRGRPTTHVKFDEATAMLAGDALQPLAFDLLASMPIAPA-----LIV 147
Query: 179 RVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGA 238
+ + RA GSQG+ GQ +L + ++ E+ + K G + AC
Sbjct: 148 QATQSLARAAGSQGMAGGQAIDLFSVG--------HALSRDELQ-TMHSMKTGAMLACSV 198
Query: 239 ACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
A G I+ G S + L Y VG+ +V L T + L K
Sbjct: 199 ALGGIVAGASSASRQALDAYAQAVGLAFQVVDDILDVTADSTSLGK 244
>gi|407979670|ref|ZP_11160480.1| geranyltranstransferase [Bacillus sp. HYC-10]
gi|407413682|gb|EKF35371.1| geranyltranstransferase [Bacillus sp. HYC-10]
Length = 296
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++ M + + A + P L +A G E I A+ ++H S IH++LP
Sbjct: 30 PEDLKASMLYSLKAGGKRLRPVLVLALLNAYGKREEDGIPVGCAVEMIHTYSLIHDDLPC 89
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLAS--SDN-PAGNNSGRILRVMV 182
D L + KPT + + T +L DA+L L+ S SD PA L+++
Sbjct: 90 MDDDDL-RRGKPTNHKVYGEATAVLAGDALLTESFRLITSQLSDRVPAEQK----LKIID 144
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
E+ ++ G+ G+V GQ+++++ Q +L I + +K G+L A GA
Sbjct: 145 ELVKSAGALGMVGGQFDDMEAEQKQIPLSELESI---------HARKTGKLLTFSVAAGA 195
Query: 243 ILGGGSEKEIELLRRYGFYVGM 264
+L G S +IE LR + +++G+
Sbjct: 196 MLAGASNDDIEKLREFSYHIGI 217
>gi|302555532|ref|ZP_07307874.1| polyprenyl synthatase [Streptomyces viridochromogenes DSM 40736]
gi|302473150|gb|EFL36243.1| polyprenyl synthatase [Streptomyces viridochromogenes DSM 40736]
Length = 380
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 19/189 (10%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
PAL V + E++ E I A A+ ++H S +H++L D + + T++ P
Sbjct: 95 PALAVLSAEVMSAAPETGIPGAVAVELVHNFSLLHDDLMDGDEQR---RHRDTVWKVHGP 151
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
+LV DA+ E+L +GR R + TRA+ ++GQ ++
Sbjct: 152 AQAILVGDALFALANEMLLELGTV---EAGRATRRLTTATRAL-----IDGQAQDISYEH 203
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
D VE E K G L AC ++ GA+LGG ++ + L RYG+++G+
Sbjct: 204 RDR--------VTVEECLEMEGNKTGALLACASSIGAVLGGADDRTADTLERYGYHLGLA 255
Query: 266 QGIVSRRLG 274
V LG
Sbjct: 256 FQAVDDLLG 264
>gi|452852192|ref|YP_007493876.1| Polyprenyl synthetase [Desulfovibrio piezophilus]
gi|451895846|emb|CCH48725.1| Polyprenyl synthetase [Desulfovibrio piezophilus]
Length = 299
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 21/226 (9%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAA-----AALHVMHAASFIH 120
P ++ M + + A + P L ++ +++G E I A A+L +H S IH
Sbjct: 28 PARLHASMEYSLLAGGKRLRPVLTLSWAQMLG---EATITDAVMPFAASLECIHTYSLIH 84
Query: 121 ENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRV 180
++LP D L + KP+ + F T +L D +L L++++ G + R+LR
Sbjct: 85 DDLPAMDDDDL-RRGKPSNHKKFDEATAILAGDGLLTEAFGLMSTASIVKGLPADRVLRA 143
Query: 181 MVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDV--EMTYETYKKKEGRLHACGA 238
+ + A G+ G+V GQ +++ L G T V E + K G L
Sbjct: 144 IAVLAHAAGASGMVGGQAVDME----------LTGGTSVALEQLRIMHAMKTGALITAAC 193
Query: 239 ACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
CGAIL G +E +IE R YG +G+ IV L + E L K
Sbjct: 194 ECGAILSGSTEADIENAREYGQAIGVAFQIVDDILDVVSDTETLGK 239
>gi|257064654|ref|YP_003144326.1| geranylgeranyl pyrophosphate synthase [Slackia heliotrinireducens
DSM 20476]
gi|256792307|gb|ACV22977.1| geranylgeranyl pyrophosphate synthase [Slackia heliotrinireducens
DSM 20476]
Length = 364
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 119/251 (47%), Gaps = 32/251 (12%)
Query: 26 SYRPMMVTMAMSTPNKNKSYWTSVHED-----IGAHLRQAVVVKEPVEVYEPMRHFVFAA 80
S R + ++ P K+ + +V+ D + ++ Q +V +Y+P+ +
Sbjct: 16 SKRMAAIMSGIANPPKDFEEYLNVYADAVGDLVNTYIPQGMVADMDCYLYDPLLAYSKNG 75
Query: 81 PVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMY 140
P +C+AAC VGG +A+ +AAA+ H A+ IH++ ++D +L + +P ++
Sbjct: 76 GKRHRPLICLAACAAVGGDVRKALSSAAAIEHFHTAALIHDD--IADEATL-RRGEPCLH 132
Query: 141 HAFKPNTELLVADAMLPFGLELLASS--DNPAGNNSG--RILRVMVEMTRAMGSQGVVEG 196
+ + + D GL L+ + +PA ++ R++ ++EMTR +EG
Sbjct: 133 LTYGMGLAINMGD----LGLSLVNGTVMKDPALDDHTKVRVVTELIEMTRR-----TIEG 183
Query: 197 QYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGA---ACGAILGGGSEKEIE 253
Q ++ ++ D + + + + T+K H GA A GAI+GG +E IE
Sbjct: 184 QAMDIGWAR----DERYDISPENYLIMATHKTA----HYSGAVPLAIGAIVGGATEGAIE 235
Query: 254 LLRRYGFYVGM 264
LR YG G+
Sbjct: 236 ALRNYGLDTGL 246
>gi|163857373|ref|YP_001631671.1| geranyltranstransferase [Bordetella petrii DSM 12804]
gi|163261101|emb|CAP43403.1| probable geranyltranstransferase [Bordetella petrii]
Length = 303
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 98/225 (43%), Gaps = 20/225 (8%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAA---CELVGGHRE-QAIV--AAAALHVMHAASFI 119
P ++E MR+ V + AL AA C + G QA + AAAA+ ++HA S I
Sbjct: 34 PARLHEAMRYAVLGGGKRIRAALVYAAGQACPVNGSAVAIQASMDRAAAAVELIHAYSLI 93
Query: 120 HENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILR 179
H++LP D +L + +PT + F T +L DA+ P ELLA D P +++
Sbjct: 94 HDDLPCMDDDTL-RRGRPTTHVQFDEATAMLAGDALQPLAFELLA--DMPIA--PALVVQ 148
Query: 180 VMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAA 239
+ RA GS G+ GQ +L + + + K G + AC A
Sbjct: 149 ATQALARAAGSLGMAGGQAIDLH---------SVGQALSRDELQTMHSMKTGAMLACSVA 199
Query: 240 CGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
G I+ G S + L Y VG+ +V L T + L K
Sbjct: 200 LGGIVSGASSSTRQALDDYAQAVGLAFQVVDDILDVTADSASLGK 244
>gi|399060771|ref|ZP_10745757.1| geranylgeranyl pyrophosphate synthase [Novosphingobium sp. AP12]
gi|398037025|gb|EJL30228.1| geranylgeranyl pyrophosphate synthase [Novosphingobium sp. AP12]
Length = 302
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 86/197 (43%), Gaps = 12/197 (6%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
++ E MR+ + P L A E+ G RE AI A A+ +H S IH++LP D
Sbjct: 39 KLVEAMRYAAIGGGKRLRPLLLAAVAEMYGVQREAAIRAGVAIEAIHVYSLIHDDLPCMD 98
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
+L KPT++ AF T +L D++ F E+LA D + + ++ + A
Sbjct: 99 DDAL-RHGKPTLHLAFDEATAVLAGDSLHAFAFEVLA--DTATSPDPFTQIELVRTLGHA 155
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G+QG+ GQ +L + D++ + K G L GAILG
Sbjct: 156 SGAQGMAGGQMMDLVAETSE---------FDLQTVTRLQQLKTGALLGAAVEMGAILGRV 206
Query: 248 SEKEIELLRRYGFYVGM 264
+ LR Y +G+
Sbjct: 207 QPEGRSHLRGYARDIGL 223
>gi|302557115|ref|ZP_07309457.1| polyprenyl synthetase [Streptomyces griseoflavus Tu4000]
gi|302474733|gb|EFL37826.1| polyprenyl synthetase [Streptomyces griseoflavus Tu4000]
Length = 378
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 19/189 (10%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
PAL V + E+ G E + A A+ ++H S +H++L D + + T++ P
Sbjct: 93 PALAVLSAEVTGAAPETGVPGAVAVELVHNFSLLHDDLMDGDEQR---RHRDTVWKVHGP 149
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
+LV DA+ E+L + +GR R + +RA+ ++GQ ++
Sbjct: 150 AQAILVGDALFALANEVLLELGS---VEAGRATRRLTAASRAL-----IDGQAQDISYEH 201
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
D VE E K G L AC ++ GA+LGG ++ + L RYG+++G+
Sbjct: 202 RDR--------VSVEECLEMEGNKTGALLACASSIGAVLGGADDRTADALERYGYHLGLA 253
Query: 266 QGIVSRRLG 274
V LG
Sbjct: 254 FQAVDDLLG 262
>gi|317122006|ref|YP_004102009.1| farnesyl-diphosphate synthase [Thermaerobacter marianensis DSM
12885]
gi|315591986|gb|ADU51282.1| farnesyl-diphosphate synthase [Thermaerobacter marianensis DSM
12885]
Length = 308
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 96/222 (43%), Gaps = 13/222 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHRE---QAIVAAAALHVMHAASFIHEN 122
P ++E MR+ A + P L +AA VGG AAAA+ ++H S IH++
Sbjct: 38 PARIHEAMRYSALAGGKLLRPVLVMAAARCVGGPEAVTPAVRRAAAAVELVHTYSLIHDD 97
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D ++ + +P + F +L DA+L E+LA G + L V
Sbjct: 98 LPAMDDDAM-RRGQPANHVVFGEAMAILAGDALLTLAFEVLAGLPR-WGADPAVALAVAE 155
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
E+ RA G+ G++ GQ ++L Q D+ +++K G L GA
Sbjct: 156 ELARAAGTAGLIGGQVDDLDAVQ--------GAPLDLARLQSIHRRKTGALFRACVRMGA 207
Query: 243 ILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
L G E E+E L Y G IV L T + EL K
Sbjct: 208 RLAGAGEGELEALTAYATAFGEAFQIVDDILDVTGDEAELGK 249
>gi|160934292|ref|ZP_02081679.1| hypothetical protein CLOLEP_03163 [Clostridium leptum DSM 753]
gi|156866965|gb|EDO60337.1| polyprenyl synthetase [Clostridium leptum DSM 753]
Length = 293
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 12/220 (5%)
Query: 45 YWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAI 104
Y + + E + ++L +++ +V E M + + A + P L + C + GG + A+
Sbjct: 7 YLSRIEEALASYLPAKDCLQK--DVIEAMEYSLLAGGKRIRPTLTLEFCRVCGGDVQAAM 64
Query: 105 VAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA 164
A A+ ++H+ S IH++LP D + L + +P + + + LL D +L E
Sbjct: 65 PFACAVEMIHSYSLIHDDLPCMDNSDL-RRGRPANHIQYGEDIALLAGDGLLTLAFETAL 123
Query: 165 SSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYE 224
S ++ + R + +A G++G+V GQ +LQ N +E+ E
Sbjct: 124 SPESIKLAGAQRGAEAARLLAKAAGAEGMVGGQVIDLQHE---------NQRAPIEVLLE 174
Query: 225 TYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
+KK G L A G + G +K+ E Y VG+
Sbjct: 175 MDRKKTGALIQAAAQMGCAVAGADQKQREAAVEYAACVGL 214
>gi|337278944|ref|YP_004618415.1| Geranyltranstransferase [Ramlibacter tataouinensis TTB310]
gi|334730020|gb|AEG92396.1| Geranyltranstransferase (Farnesyl-diphosphate synthase)-like
protein [Ramlibacter tataouinensis TTB310]
Length = 309
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 109/238 (45%), Gaps = 23/238 (9%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L + VV P + + MR+ V + P L +AA E V G+ A+ AA A+ ++HA
Sbjct: 33 LSRWVVADAPAGLGDAMRYAVLDGGKRLRPLLVLAAAEAVRGNEAAALRAACAVELIHAY 92
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA--SSDNPAGNNS 174
S +H+++P D ++ + KPT++ F LL DA+ ELLA D +
Sbjct: 93 SLVHDDMPCMD-NDVLRRGKPTVHVKFGQAQALLAGDALQALAFELLAPEDEDGVSATVQ 151
Query: 175 GRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLH 234
+ R+ + RA G +G+ GQ +L D+ +L E +++K G L
Sbjct: 152 AALCRL---LARAAGHEGMAGGQAIDLASVGQQLDEPQLR---------EMHRRKTGALL 199
Query: 235 ----ACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GAACG I G + + L RYG +G+ +V L T + L K A K
Sbjct: 200 RGSVMMGAACGDI--GTAARAA--LSRYGAALGLAFQVVDDILDVTADSATLGKTAGK 253
>gi|308081287|ref|NP_001183931.1| putative geranylgeranyl pyrophosphate synthase 3 [Zea mays]
gi|148535923|gb|ABQ85648.1| putative geranylgeranyl pyrophosphate synthase 3 [Zea mays]
gi|413947066|gb|AFW79715.1| putative geranylgeranyl pyrophosphate synthase 3 [Zea mays]
Length = 363
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 111/223 (49%), Gaps = 7/223 (3%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P + E MR+ V A + P L +AACELVGG A+ A A+ ++H AS IH+++P
Sbjct: 92 PEVLSESMRYSVLAGGKRLRPVLAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPC 151
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D +L + +P+ + AF T LL DA+L E +A AG + R LR +VE+
Sbjct: 152 MDDDAL-RRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELG 210
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
G G+ GQ ++ L + + + K RL A GA++G
Sbjct: 211 SVAGVGGIAAGQVADMASEGAPSGSVSLGALEYIHV------HKTARLVEAAAVSGAVVG 264
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GG + E+E +RRY ++G++ +V L T E+L K A K
Sbjct: 265 GGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGK 307
>gi|334147685|ref|YP_004510614.1| polyprenyl synthetase [Porphyromonas gingivalis TDC60]
gi|333804841|dbj|BAK26048.1| polyprenyl synthetase [Porphyromonas gingivalis TDC60]
Length = 325
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 99/201 (49%), Gaps = 19/201 (9%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
++P +++P+ + + + P L ACE+ GG + A+ A A+ H + +H++
Sbjct: 23 RKPDGLFQPISYILRLGGKRVRPTLACIACEMFGGDYKPALEVAMAIETYHNFTLLHDD- 81
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE 183
L D++S+ + K T++H + NT +L DAM E LA D+ R+L V++
Sbjct: 82 -LMDKSSM-RRGKETVHHRWGDNTAILSGDAMTVAAYEHLARVDS-------RLLPVLLP 132
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAI 243
+ M + + +GQ Q D D + + + + E E + K L A GAI
Sbjct: 133 LFNRMAME-ICQGQ-------QYDMDFERRDFVAEDEYL-EMIRLKTAVLLATALKMGAI 183
Query: 244 LGGGSEKEIELLRRYGFYVGM 264
GG ++ ++L RYG ++G+
Sbjct: 184 AGGADIEKADILYRYGIHIGL 204
>gi|283781730|ref|YP_003372485.1| polyprenyl synthetase [Pirellula staleyi DSM 6068]
gi|283440183|gb|ADB18625.1| Polyprenyl synthetase [Pirellula staleyi DSM 6068]
Length = 296
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 14/204 (6%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P + E +RH + A + P L + ACE G R +A+ AA A+ ++H S IH++LP
Sbjct: 33 PTHLAEAIRHSLLAPAKRLRPLLVLIACEACGYDRSKAMPAAVAVELIHTYSLIHDDLPA 92
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D + + +P+ + F +T +L DA+L E+LA+ P + + + E+
Sbjct: 93 MDDDDM-RRGRPSCHAKFGESTGILAGDALLAQAFEVLAADHLPGPV----VAKCVKELA 147
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
A G+ +V GQ+++L D G+ +E +++K G + GAI+
Sbjct: 148 VAAGAANLVGGQHDDLGAEFAD------LGLASLE---AIHRRKTGAMICVSLRLGAIIA 198
Query: 246 GGSEKEIELLRRYGFYVGMIQGIV 269
G S + + L +YG +G+ IV
Sbjct: 199 GASSEVLTALSQYGERLGLAFQIV 222
>gi|33597051|ref|NP_884694.1| geranyltranstransferase [Bordetella parapertussis 12822]
gi|33566502|emb|CAE37758.1| probable geranyltranstransferase [Bordetella parapertussis]
Length = 303
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 100/233 (42%), Gaps = 28/233 (12%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACEL---------VGGHREQAIVAAAALHVMHAA 116
P ++E MR+ V + L AA + VG ++A AAA+ ++HA
Sbjct: 34 PTRLHEAMRYAVLGGGKRVRAVLVYAAGQACPVNGSTLAVGASMDRA---AAAVELIHAY 90
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD-NPAGNNSG 175
S +H++LP D +L + +PT++ F T +L DA+ P ELLA PA
Sbjct: 91 SLVHDDLPCMDDDTL-RRGRPTVHVQFDEATAMLAGDALQPLAFELLAGMPIAPA----- 144
Query: 176 RILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHA 235
+++ + RA GSQG+ GQ +L + + + + K G + A
Sbjct: 145 LVVQAAQVLARAAGSQGMAGGQAIDLH---------SVGRMLTRDELQTMHSMKTGAMLA 195
Query: 236 CGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
C G I+ G S + L Y +G+ +V L T + L K A K
Sbjct: 196 CSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGK 248
>gi|260654971|ref|ZP_05860459.1| geranyltranstransferase [Jonquetella anthropi E3_33 E1]
gi|260630286|gb|EEX48480.1| geranyltranstransferase [Jonquetella anthropi E3_33 E1]
Length = 280
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 91/228 (39%), Gaps = 9/228 (3%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++E M + + A + P LC L G E A AL ++H AS IH++LP
Sbjct: 13 PPRLWEAMCYSLEAGGKRIRPVLCQEGARLAGVKAEDTFPMALALEMVHTASLIHDDLPC 72
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D SL + KPT + F + LL DA+L FG + + R++R M
Sbjct: 73 MDNDSL-RRGKPTNHSVFGESLALLAGDALLCFGFQTALEGLKARKIETKRVVRAMELFA 131
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
A+G QG+ GQ D D + D+ K L C CG LG
Sbjct: 132 SALGPQGMCGGQTL--------DTDLQSRASCDLPFVQSMASGKTMALIRCSVLCGLCLG 183
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVN 293
+ E L YG +G+ I L T EE K K E +
Sbjct: 184 ERGDALTERLDEYGRRLGLAFQIADDLLDATATTEEAGKTTGKDEEQD 231
>gi|407473843|ref|YP_006788243.1| polyprenyl synthetase [Clostridium acidurici 9a]
gi|407050351|gb|AFS78396.1| polyprenyl synthetase [Clostridium acidurici 9a]
Length = 298
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 102/215 (47%), Gaps = 14/215 (6%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHR-EQAIVAAAALHVMHAASFIHENLPLSD 127
V E M++ + A + P L + A ELV E+A+ A+A+ ++H S IH++LP D
Sbjct: 32 VCESMKYSILAGGKRIRPILTLKAFELVSKSSFEKALPFASAIEMIHTYSLIHDDLPPMD 91
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
+ KPT + + +L DA+L F E + S + ++ + E+ +A
Sbjct: 92 NDDF-RRGKPTNHKVYGEAMAILAGDALLNFAYETMIESIPETSKDVSGYIKAIKEIGKA 150
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G G++ GQ ++ + N +++ ++ + + KK L GA L
Sbjct: 151 AGVYGMIGGQVVDIISDE--------NIMSEEQLRF-IHNKKTSALIEASILSGAFLANA 201
Query: 248 SEKEIELLRRYGFYVGM---IQGIVSRRLGPTEEI 279
S+ +I L++YG +G+ I+ + ++G E++
Sbjct: 202 SDNQIIALKKYGEAIGLCFQIRDDILDKIGDNEKL 236
>gi|225677225|ref|ZP_03788218.1| Geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225590749|gb|EEH11983.1| Geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 263
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 93/198 (46%), Gaps = 22/198 (11%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
++ MR+ + A ++ L VA+ + ++ I AAA+ +HA S IH++LP D
Sbjct: 25 KLISAMRYILLAPAKHIRSFLVVASSRVFNAEAKKVISVAAAIEFVHAYSLIHDDLPCMD 84
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
+ +S+ + + F T +L DA+L E+L+S + I++V +++A
Sbjct: 85 NSD-TRRSQLSCHKKFDEATAVLAGDALLTLAFEVLSSLNEK----RCEIIKV---LSQA 136
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
+G +G+V GQ L+ D E + K +L A GAI+G
Sbjct: 137 IGIRGMVGGQ--------------ALDIGADFNKIKEIHLMKTAKLFAASCEIGAIIGNA 182
Query: 248 SEKEIELLRRYGFYVGMI 265
+K+ + L YG +G+I
Sbjct: 183 IDKQRKALYNYGINLGLI 200
>gi|418961147|ref|ZP_13513034.1| geranyltranstransferase [Lactobacillus salivarius SMXD51]
gi|380344814|gb|EIA33160.1| geranyltranstransferase [Lactobacillus salivarius SMXD51]
Length = 305
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 94/195 (48%), Gaps = 15/195 (7%)
Query: 71 EPMRHFVFAAPVNMAPALCVAACELVGGHREQA-IVAAAALHVMHAASFIHENLPLSDRT 129
E MR+ V A + P L + + +G ++ A +L ++H S IH++LP D
Sbjct: 44 EAMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDLPEMDND 103
Query: 130 SLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMG 189
L + KPT + F +L D +L E L+ +D ++ + ++++ ++ A G
Sbjct: 104 EL-RRGKPTSHKKFGQAIAVLAGDGLLTTSFEWLSLTDI----DNDKKIKLISQLALAAG 158
Query: 190 SQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSE 249
QG+V GQ +++ +++K N +E + K G L G IL S+
Sbjct: 159 PQGMVSGQTDDILG-----ENKKYN----LEELKHLHAGKTGALLRYACIAGGILSDASD 209
Query: 250 KEIELLRRYGFYVGM 264
K++ELLR+YG G+
Sbjct: 210 KQLELLRKYGENFGL 224
>gi|347735967|ref|ZP_08868722.1| Geranyltranstransferase [Azospirillum amazonense Y2]
gi|346920671|gb|EGY01682.1| Geranyltranstransferase [Azospirillum amazonense Y2]
Length = 299
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 95/199 (47%), Gaps = 16/199 (8%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
++YE MR+ + P L + + L G A+ AAA+ +H S IH++LP D
Sbjct: 36 KLYEAMRYGCLGGGKRLRPFLVMESARLFGVSPACALRVAAAVEFVHCYSLIHDDLPAMD 95
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE-MTR 186
SL + +PT++ F T +L DA+L E++ +P + R+ +V + +
Sbjct: 96 DASL-RRGRPTVHRQFDEATAILAGDALLTAAFEVMT---DPETHEDPRVRCALVSALAK 151
Query: 187 AMGSQGVVEGQYNELQC-SQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
A G +G+V GQ +L +Q D + IT ++ + K G L A A GAILG
Sbjct: 152 ASGPRGMVGGQMLDLIAETQALD----IGAITRLQ------RMKTGELIAFAATAGAILG 201
Query: 246 GGSEKEIELLRRYGFYVGM 264
S + L+ Y +G+
Sbjct: 202 RASPPQFHALQAYAHDLGL 220
>gi|381159562|ref|ZP_09868794.1| geranylgeranyl pyrophosphate synthase [Thiorhodovibrio sp. 970]
gi|380877626|gb|EIC19718.1| geranylgeranyl pyrophosphate synthase [Thiorhodovibrio sp. 970]
Length = 297
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 75/145 (51%), Gaps = 4/145 (2%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
+R V +EP +++ MRH + P L AA VG REQ AA AL ++H
Sbjct: 23 MRLPSVDQEPARLHQAMRHGALGGGKRLRPTLAYAAASAVGVTREQIDAAACALELIHTY 82
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGR 176
S IH++LP D L + +PT + AF T +L DA+ + LA+ + A R
Sbjct: 83 SLIHDDLPAMDDDDL-RRGQPTCHKAFDEATAILAGDALQTLAFQWLAT--DSANTVDAR 139
Query: 177 ILRVMVEMTRAMGSQGVVEGQYNEL 201
I R++ + RA GS+G+V GQ +L
Sbjct: 140 I-RMIEVLARAAGSRGMVAGQALDL 163
>gi|23099332|ref|NP_692798.1| geranyltranstransferase [Oceanobacillus iheyensis HTE831]
gi|22777561|dbj|BAC13833.1| geranyltranstransferase [Oceanobacillus iheyensis HTE831]
Length = 294
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 97/200 (48%), Gaps = 13/200 (6%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P + E M + + A + P L +A+ E+ G ++ + +A A+ ++H S IH++LP
Sbjct: 30 PNNLKESMLYSLNAGGKRLRPILILASYEVYGKTLDKVMSSAVAIEMIHTYSLIHDDLPA 89
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
+ K T + F T +L DA+L + +L++S D + ++R++ E
Sbjct: 90 M-DDDDYRRGKLTNHKQFNEATAILAGDALLTYSFQLISSDDLLTSDEKVELIRILSE-- 146
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
A G G+V GQ +++ + +T EM E + K G L GA LG
Sbjct: 147 -ASGPAGMVAGQILDMEAEK--------QAVTLEEME-EIHALKTGELIRFAIIAGAYLG 196
Query: 246 GGSEKEIELLRRYGFYVGMI 265
G ++ +++ L Y +Y+G+I
Sbjct: 197 GATDNQLKHLTDYAYYLGLI 216
>gi|171464023|ref|YP_001798136.1| polyprenyl synthetase [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171193561|gb|ACB44522.1| Polyprenyl synthetase [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 300
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 22/229 (9%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAI------VAAAALHVMHAASFI 119
P ++E +R+ + P L AA +L G++ + AA A+ +HA S +
Sbjct: 33 PHRLHEAIRYAAQGGGKRIRPLLVYAAGQL--GNKSDVVPVEFLDAAAVAIECIHAYSLV 90
Query: 120 HENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILR 179
H++LP D L + +PT++ AF T LLV DA+ E+LA N G+ R LR
Sbjct: 91 HDDLPCMDDDYL-RRGRPTVHKAFDEATALLVGDALQTRAFEILA---NTNGDAQVR-LR 145
Query: 180 VMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAA 239
++ + A GS+G+ GQ +L+ +KL D++ + + K G L +C
Sbjct: 146 MISTLAAASGSRGMAGGQAIDLESV-----GKKL----DLQGLKQMHAMKTGALLSCAVE 196
Query: 240 CGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
G I + ++ L+ Y +G+ IV L T + + L K A K
Sbjct: 197 LGGIAAHLNFAQMMQLQSYSKSLGLAFQIVDDVLDATADSQTLGKTAGK 245
>gi|333029215|ref|ZP_08457276.1| Polyprenyl synthetase [Bacteroides coprosuis DSM 18011]
gi|332739812|gb|EGJ70294.1| Polyprenyl synthetase [Bacteroides coprosuis DSM 18011]
Length = 324
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 19/212 (8%)
Query: 53 IGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHV 112
+ +L+ K+P +YEP+ + + + P L + A +L E+ + AA A+ V
Sbjct: 11 VNNYLKSLNEKKDPKNLYEPIHYVLSIGGKRIRPILMLLAYQLYKDDLEKTLPAACAIEV 70
Query: 113 MHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGN 172
H + +H++ L D++ L ++KPT+++ + NT +L DAML LLA + P N
Sbjct: 71 YHNFTLLHDD--LMDKSDL-RRNKPTVHNVWNANTAILSGDAMLILSYHLLAKA--PQEN 125
Query: 173 NSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGR 232
S V+ E + + + EGQ Q D + N + E + + K
Sbjct: 126 LSA----VLNEFNKV--TLEICEGQ-------QYDIEFETKNSVK-AEDYLDMIRLKTAV 171
Query: 233 LHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
L A GAI+ G S+++ LL +G VG+
Sbjct: 172 LLASSIKMGAIIAGASDEDTNLLYDFGLNVGL 203
>gi|395781325|ref|ZP_10461745.1| hypothetical protein MCY_00142 [Bartonella rattimassiliensis 15908]
gi|395421439|gb|EJF87688.1| hypothetical protein MCY_00142 [Bartonella rattimassiliensis 15908]
Length = 301
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 11/230 (4%)
Query: 59 QAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASF 118
Q+ + P + + MR+ V + P L + + L E ++ A AL +H S
Sbjct: 28 QSGEISRPENLIKAMRYGVLNGGKRLRPFLVIQSAALFDIPVEYSLDVACALECIHCYSL 87
Query: 119 IHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRIL 178
IH++LP D ++ + KPT++ AF T +L +A+L E++A + RI
Sbjct: 88 IHDDLPAMD-NDILRRGKPTVHIAFDEATAILAGNALLTLAFEIIAHKACVLSTDM-RI- 144
Query: 179 RVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGA 238
+++ + ++ G G++ GQ +L+ ++K TD +T + K AC A
Sbjct: 145 KLLTSLAQSAGLGGMIGGQMLDLEA------EKKSQESTDDIITLQRMKTAALISFACQA 198
Query: 239 ACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GAI+G S++ E L +G Y+G+ + L + L K A K
Sbjct: 199 --GAIIGNASKELTEKLTDFGTYLGLAFQLTDDLLDVIANTQTLGKTAGK 246
>gi|383775087|ref|YP_005454156.1| geranyltranstransferase [Bradyrhizobium sp. S23321]
gi|381363214|dbj|BAL80044.1| geranyltranstransferase [Bradyrhizobium sp. S23321]
Length = 307
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 10/201 (4%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + + MR+ + P L V + + G RE A++ AAL +H S IH++
Sbjct: 37 IARPKRLMDAMRYSTLNGGKRLRPFLVVESAAVFGVPREAALLVGAALECIHCYSLIHDD 96
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D + L + +PT++ T +L D +L +++ + D + + R+L +
Sbjct: 97 LPAMDNSDL-RRGRPTLHKKTDDATAILAGDGLLTLAFDIV-TRDEIHSDANVRLL-LTR 153
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+ R G G+V GQ +L + G +++ + K G L G GA
Sbjct: 154 ALARCAGIGGMVGGQILDLAGEG------RFGGNEPIDVA-RIQQMKTGALLRYGCIAGA 206
Query: 243 ILGGGSEKEIELLRRYGFYVG 263
ILG S+KE + L YG +G
Sbjct: 207 ILGQASQKEYQALDDYGRALG 227
>gi|289767672|ref|ZP_06527050.1| polyprenyl synthetase [Streptomyces lividans TK24]
gi|289697871|gb|EFD65300.1| polyprenyl synthetase [Streptomyces lividans TK24]
Length = 354
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 19/189 (10%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
PAL V + E+ G E + A A+ ++H S +H++L D + + T++ P
Sbjct: 69 PALAVLSAEVTGAAPEVGVPGAVAVELVHNFSLLHDDLMDGDEQR---RHRDTVWKVHGP 125
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
+LV DA+ E+L +GR R + + +R++ ++GQ ++
Sbjct: 126 AQAILVGDALFALANEVLLELGTV---EAGRATRRLTKASRSL-----IDGQAQDISYEH 177
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
D VE E K G L AC ++ GA+LGG E+ + L +YG+++G+
Sbjct: 178 RDR--------VSVEECLEMEGNKTGALLACASSIGAVLGGADERTADTLEKYGYHLGLA 229
Query: 266 QGIVSRRLG 274
V LG
Sbjct: 230 FQAVDDLLG 238
>gi|389852224|ref|YP_006354458.1| bifunctional short chain isoprenyl diphosphate synthase [Pyrococcus
sp. ST04]
gi|388249530|gb|AFK22383.1| putative bifunctional short chain isoprenyl diphosphate synthase
[Pyrococcus sp. ST04]
Length = 342
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
KEP +Y+ RH+ A + P + + A E VGG E+AI A A+ ++H S +H+++
Sbjct: 29 KEPAILYDAARHYPLAGGKRVRPFVVLTATEAVGGEWEKAIYPAVAVELIHNYSLVHDDI 88
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD-NPAGNNSGRILRVMV 182
D T + +PT++ + N +L D + E ++ +D +P +IL +V
Sbjct: 89 MDMDETR---RGRPTVHKLWGINMAILAGDLLFSKAFEAISRADISP--EKKAKILETIV 143
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKK----KEGRLHACGA 238
+ S + EGQ +L+ D +T + Y + K G L A
Sbjct: 144 K-----ASNELCEGQAMDLEFENRD------------TVTIDEYMRMISGKTGALFDASA 186
Query: 239 ACGAILGGGSEKEIELLRRYGFYVGM 264
G I+G +E+ I L +G VG+
Sbjct: 187 KVGGIVGTENEEYIAALSTWGRNVGI 212
>gi|358451415|ref|ZP_09161849.1| polyprenyl synthetase [Marinobacter manganoxydans MnI7-9]
gi|357224648|gb|EHJ03179.1| polyprenyl synthetase [Marinobacter manganoxydans MnI7-9]
Length = 298
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 73/134 (54%), Gaps = 4/134 (2%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
+ E MR+ V + PALC+AA + +G ++A++ A ++ ++HA S IH++LP D
Sbjct: 36 LQEAMRYSVLGGGKRIRPALCLAAAKAMGQTGDEALIPACSVELIHAYSLIHDDLPAMDD 95
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
L + +PT + AF T +L DA+ LA + P S R++ V E+ RA
Sbjct: 96 DEL-RRGRPTTHIAFDEATAILAGDALQALAFGWLAEA--PGLPESVRLIMVR-ELARAS 151
Query: 189 GSQGVVEGQYNELQ 202
G G+V GQ +L+
Sbjct: 152 GHGGMVGGQAIDLE 165
>gi|325983215|ref|YP_004295617.1| Geranyltranstransferase [Nitrosomonas sp. AL212]
gi|325532734|gb|ADZ27455.1| Geranyltranstransferase [Nitrosomonas sp. AL212]
Length = 297
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P +++ MR+ V + P L AA ELV E+ V AAA+ ++HA S +H++LP
Sbjct: 31 PERLHKAMRYSVLGGGKRVRPLLSFAAGELVAADLERVTVVAAAVELIHAYSLVHDDLPC 90
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D ++ + KPT + + T LL D++ ELLA + P + L+++ ++
Sbjct: 91 MD-DDILRRGKPTCHVEYDEATALLTGDSLQTLAFELLA--EKPLADIPETQLQMIAQLA 147
Query: 186 RAMGSQGVVEGQYNEL 201
A GS+G+ GQ +L
Sbjct: 148 LASGSRGMAGGQAFDL 163
>gi|163781563|ref|ZP_02176563.1| geranylgeranyl pyrophosphate synthase [Hydrogenivirga sp.
128-5-R1-1]
gi|159882783|gb|EDP76287.1| geranylgeranyl pyrophosphate synthase [Hydrogenivirga sp.
128-5-R1-1]
Length = 266
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 4/154 (2%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
S W ED LR+ +V ++P E++E M +++F + P L VA +GG E A
Sbjct: 5 SLWKDRIED---RLRELLVPQQPQELFEAMAYYLFQPGKRVRPLLTVAVASSLGGDEEDA 61
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
I A+ ++H S IH++LP D + P+ + F +L DA+L + EL+
Sbjct: 62 ITVGCAIEMIHNYSLIHDDLPAMDNDDF-RRGLPSCHRKFGEAMAVLAGDALLTYAFELM 120
Query: 164 ASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQ 197
+ + +++++ + G G+V GQ
Sbjct: 121 SKEGVFRTLSPEEVVKLINTIAVKSGIGGMVGGQ 154
>gi|367472887|ref|ZP_09472460.1| putative Geranyltranstransferase (Farnesyl-diphosphate synthase)
(FPP synthase) [Bradyrhizobium sp. ORS 285]
gi|365274857|emb|CCD84928.1| putative Geranyltranstransferase (Farnesyl-diphosphate synthase)
(FPP synthase) [Bradyrhizobium sp. ORS 285]
Length = 306
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 12/202 (5%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + E MR+ + P L V + + G R A++A AAL +H S IH++
Sbjct: 36 IARPKRLIESMRYSSLGGGKRLRPFLVVESAAVFGVPRRGALMAGAALECIHCYSLIHDD 95
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD-NPAGNNSGRILRVM 181
LP D + L + +PT++ A+ T +L DA+L +++ + +P ++G L +
Sbjct: 96 LPAMDNSDL-RRGRPTLHKAYDDATAILAGDALLTIAFDIITRDEIHP---DAGVRLALT 151
Query: 182 VEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACG 241
+ R G G+ GQ +L + DR + V+ + K G L G G
Sbjct: 152 RALARCAGVGGMAGGQILDL-AGEGRFGDRDPVDVARVQ------QMKTGALLRFGCIAG 204
Query: 242 AILGGGSEKEIELLRRYGFYVG 263
A+LG S E + L YG +G
Sbjct: 205 ALLGQASPAEYQALDDYGRALG 226
>gi|302148849|pdb|3NF2|A Chain A, Crystal Structure Of Polyprenyl Synthetase From
Streptomyces Coelicolor A3(2)
Length = 352
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 19/189 (10%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
PAL V + E+ G E + A A+ ++H S +H++L D + + T++ P
Sbjct: 59 PALAVLSAEVTGAAPEVGVPGAVAVELVHNFSLLHDDLMDGDEQR---RHRDTVWKVHGP 115
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
+LV DA+ E+L +GR R + + +R++ ++GQ ++
Sbjct: 116 AQAILVGDALFALANEVLLELGTV---EAGRATRRLTKASRSL-----IDGQAQDISYEH 167
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
D VE E K G L AC ++ GA+LGG E+ + L +YG+++G+
Sbjct: 168 RDR--------VSVEECLEMEGNKTGALLACASSIGAVLGGADERTADTLEKYGYHLGLA 219
Query: 266 QGIVSRRLG 274
V LG
Sbjct: 220 FQAVDDLLG 228
>gi|21225056|ref|NP_630835.1| polyprenyl synthatase [Streptomyces coelicolor A3(2)]
gi|4539167|emb|CAB39696.1| putative polyprenyl synthatase [Streptomyces coelicolor A3(2)]
Length = 378
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 19/189 (10%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
PAL V + E+ G E + A A+ ++H S +H++L D + + T++ P
Sbjct: 93 PALAVLSAEVTGAAPEVGVPGAVAVELVHNFSLLHDDLMDGDEQR---RHRDTVWKVHGP 149
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
+LV DA+ E+L +GR R + + +R++ ++GQ ++
Sbjct: 150 AQAILVGDALFALANEVLLELGT---VEAGRATRRLTKASRSL-----IDGQAQDISYEH 201
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
D VE E K G L AC ++ GA+LGG E+ + L +YG+++G+
Sbjct: 202 RDR--------VSVEECLEMEGNKTGALLACASSIGAVLGGADERTADTLEKYGYHLGLA 253
Query: 266 QGIVSRRLG 274
V LG
Sbjct: 254 FQAVDDLLG 262
>gi|254236932|ref|ZP_04930255.1| geranyltranstransferase [Pseudomonas aeruginosa C3719]
gi|126168863|gb|EAZ54374.1| geranyltranstransferase [Pseudomonas aeruginosa C3719]
Length = 295
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 95/203 (46%), Gaps = 14/203 (6%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
+E +YE MR+ V + P L AACE +GG ++A AA A+ ++HA S +H++L
Sbjct: 26 EELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDL 85
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASS-DNPAGNNSGRILRVMV 182
P D L + +PT + AF T +L AD + E+LA + NP L ++
Sbjct: 86 PAMDDDDL-RRGQPTTHRAFDEATAILAADGLQALAFEVLADTRRNP--QEHAVCLEMLT 142
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+ RA GS G+V GQ +L D L + ++ K G L GA
Sbjct: 143 RLARAAGSAGMVGGQAIDLGSVGVALDQAALEVM---------HRHKTGALIEASVRLGA 193
Query: 243 ILGGGSEK-EIELLRRYGFYVGM 264
+ G +E + L RY +G+
Sbjct: 194 LASGRAESASLAALERYAEAIGL 216
>gi|148258788|ref|YP_001243373.1| farnesyl-diphosphate synthase [Bradyrhizobium sp. BTAi1]
gi|146410961|gb|ABQ39467.1| farnesyl-diphosphate synthase [Bradyrhizobium sp. BTAi1]
Length = 307
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + E MR+ + P L V + + G R+ A++A AAL +H S IH++
Sbjct: 37 IARPQRLIESMRYSSLGGGKRLRPFLVVESAAVFGVPRKGALLAGAALECIHCYSLIHDD 96
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD-NPAGNNSGRILRVM 181
LP D + L + +PT++ + T +L DA+L +++ + +P ++G L +
Sbjct: 97 LPAMDNSDL-RRGRPTLHKVYDDATAILAGDALLTIAFDIITRDEIHP---DAGVRLALT 152
Query: 182 VEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACG 241
+ R G G+ GQ +L D +G DV + K G L G G
Sbjct: 153 RALARCAGVGGMAGGQILDLAGEGRFGD----SGPVDVA---RVQQMKTGALLRFGCIAG 205
Query: 242 AILGGGSEKEIELLRRYGFYVG 263
A+LG S E + L YG +G
Sbjct: 206 ALLGQASPAEYQALDDYGRALG 227
>gi|288928474|ref|ZP_06422321.1| polyprenyl synthetase [Prevotella sp. oral taxon 317 str. F0108]
gi|288331308|gb|EFC69892.1| polyprenyl synthetase [Prevotella sp. oral taxon 317 str. F0108]
Length = 324
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 19/212 (8%)
Query: 53 IGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHV 112
I A+L ++P +YEP+R+ + + PAL + A L E + A L
Sbjct: 11 INAYLEALPFNRKPQSLYEPIRYVLSIGGKRIRPALALLAYNLFKDDPESILAPACGLET 70
Query: 113 MHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGN 172
H + +H++ L D +L + KPT++ + NT +L D+ML +L+A D
Sbjct: 71 YHNYTLLHDD--LMDNAAL-RRGKPTVHKRWDANTAILSGDSMLVLAYQLVAQCD----- 122
Query: 173 NSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGR 232
+ ++ VM T G EGQ Q D D N +T+ E E + K
Sbjct: 123 -AAKLKPVMELFTETALEIG--EGQ-------QYDMDFEHRNDVTEDEYI-EMIRLKTSV 171
Query: 233 LHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
L AC GA+L +++ +LL ++G +G+
Sbjct: 172 LLACAMKMGALLADAPQRDADLLYKFGEQIGL 203
>gi|390577032|ref|ZP_10257072.1| polyprenyl synthetase [Burkholderia terrae BS001]
gi|389931010|gb|EIM93098.1| polyprenyl synthetase [Burkholderia terrae BS001]
Length = 297
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 100/230 (43%), Gaps = 21/230 (9%)
Query: 65 EPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLP 124
EP ++E MR+ V + P LC AA EL G E A+AAL ++H S +H+++P
Sbjct: 28 EPARLHEAMRYAVLGGGKRVRPLLCHAAGELTGAKAECLDAASAALEMIHVYSLVHDDMP 87
Query: 125 LSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEM 184
D L + KPT++ + T LLV DA+ L +SD A ++R E+
Sbjct: 88 CMDDDEL-RRGKPTVHVKYDEATALLVGDALQSQAFVAL-TSDVLAPAQQAALVR---EL 142
Query: 185 TRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYET-YKKKEGRLHACGAACGAI 243
A GS G+ GQ +L G T ET ++ K G L GA+
Sbjct: 143 ALASGSIGMAGGQAIDLASV----------GHTLTRPQLETMHRLKTGALLRAAVRMGAL 192
Query: 244 L-----GGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GG K ++ L Y VG+ +V L T + L K A K
Sbjct: 193 TGQIENGGPDAKALQSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGK 242
>gi|395788884|ref|ZP_10468423.1| hypothetical protein ME9_00140 [Bartonella taylorii 8TBB]
gi|395431749|gb|EJF97761.1| hypothetical protein ME9_00140 [Bartonella taylorii 8TBB]
Length = 300
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 108/222 (48%), Gaps = 12/222 (5%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + + MR+ V + P L + + L E ++ A AL +H S IH++
Sbjct: 32 IARPETLIKAMRYGVLNGGKRLRPFLVMQSAALFDIPAEHSLDIACALECVHCYSLIHDD 91
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D +L + KPT++ AF T +L +A+L F E++A + ++ RI +++
Sbjct: 92 LPAMDNDTL-RRGKPTVHRAFDEATAILAGNALLTFAFEIIAHKASTLPFDT-RI-KLVT 148
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+ ++ G G+V GQ +L+ ++K T++ +T + K AC A GA
Sbjct: 149 ALAQSAGIGGMVGGQMLDLEA------EKKPQESTNI-ITLQRMKTAALISFACQA--GA 199
Query: 243 ILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
I+G S++ E L +G Y+G+ + L T + E L K
Sbjct: 200 IIGNASKEFTEKLAAFGTYLGLAFQLTDDLLDVTAKSEILGK 241
>gi|325958579|ref|YP_004290045.1| dimethylallyltranstransferase [Methanobacterium sp. AL-21]
gi|325330011|gb|ADZ09073.1| Dimethylallyltranstransferase [Methanobacterium sp. AL-21]
Length = 328
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 106/214 (49%), Gaps = 16/214 (7%)
Query: 52 DIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALH 111
DI ++ ++ +P E+ + +H + A + P++ V + VGG E+A+ AAA+
Sbjct: 13 DIDEEIQNSLSTVDPEELKKSTQHLIKAGGKKIRPSMVVLSAIAVGGAPEEALKTAAAVE 72
Query: 112 VMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAG 171
++H S IH+++ D + + +P+++ + +L D + E + + P
Sbjct: 73 LIHTFSLIHDDIMDEDD---MRRGEPSVHVLWGEPMAILAGDTLFSKAFETVLET--PID 127
Query: 172 NNSGRILRVMVEMTRAMGS-QGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKE 230
N S RV+ + + S + EGQ +++ C + + +++ + M Y KK
Sbjct: 128 NVSYE--RVVGALKTVVDSCIKICEGQASDM----CFEGNFEVSEEAYMNMIY----KKT 177
Query: 231 GRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
G L A GAI+GGG+ +++ELL YG VG+
Sbjct: 178 GALIAASTKSGAIIGGGTPEQVELLSEYGRLVGL 211
>gi|73668941|ref|YP_304956.1| dimethylallyltranstransferase / geranyltranstransferase
[Methanosarcina barkeri str. Fusaro]
gi|72396103|gb|AAZ70376.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase
[Methanosarcina barkeri str. Fusaro]
Length = 321
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 19/217 (8%)
Query: 48 SVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAA 107
SVH D A + + + V P E+Y+ R+ V A + PA+ + A E G + + AA
Sbjct: 11 SVHVD--AAIDELLPVAHPEELYKASRYLVDAGGKRLRPAVLILAAEATGSDLKSVLPAA 68
Query: 108 AALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD 167
A+ ++H + IH+++ D I + P ++ + +L D + E+L
Sbjct: 69 VAVELVHNFTLIHDDIMDKDD---IRRGMPAVHTIWGDAGAILAGDTLYSKAFEIL---- 121
Query: 168 NPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYK 227
+ N RIL+ M +++ + EGQ+ D D K ++ E E +
Sbjct: 122 SKVQNEPARILKCMDVISKTCTE--ICEGQW-------LDMDFEKREKVSKAEYI-EMVE 171
Query: 228 KKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
KK L+A A GA+LGG S++ L YG ++G+
Sbjct: 172 KKTSVLYAAAAKIGALLGGASDEIAAALSEYGRFIGI 208
>gi|290968311|ref|ZP_06559853.1| geranyltranstransferase [Megasphaera genomosp. type_1 str. 28L]
gi|290781670|gb|EFD94256.1| geranyltranstransferase [Megasphaera genomosp. type_1 str. 28L]
Length = 295
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 76/164 (46%), Gaps = 6/164 (3%)
Query: 40 NKNKSYWTSVHEDIGAHLRQAVVVKEPV--EVYEPMRHFVFAAPVNMAPALCVAACELVG 97
N ++Y + I A L+Q + V EP +Y+ M + + A + P L +AA E +G
Sbjct: 2 NPCEAYLAAKKTVIEARLQQLLPVTEPAFAPLYKAMNYSLLAGGKRIRPILFLAALEALG 61
Query: 98 GHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLP 157
+ A AL +H+ S IH++LP D L + KPT + F +L D +L
Sbjct: 62 KESSVYMDVACALECVHSYSLIHDDLPAMDNDDL-RRGKPTNHRVFGEGMAILAGDGLLT 120
Query: 158 FGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNEL 201
F ELLA G +RV + A G G+V GQ +L
Sbjct: 121 FAFELLARQRVADAEKIGACIRV---LAHAAGPAGMVGGQAYDL 161
>gi|220931495|ref|YP_002508403.1| farnesyl-diphosphate synthase [Halothermothrix orenii H 168]
gi|219992805|gb|ACL69408.1| farnesyl-diphosphate synthase [Halothermothrix orenii H 168]
Length = 296
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 22/227 (9%)
Query: 71 EPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTS 130
+ M++ +F+ + P L + E++ G R+ A+ A++ ++H S IH++LP D
Sbjct: 38 KAMKYSLFSGGKRLRPILTLMVAEMLDGDRDSALRVGASIELVHTYSLIHDDLPSMDDDD 97
Query: 131 LIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGS 190
+ KP+ + F T +L DA+L F +L+ + P ++L+++ +++ G
Sbjct: 98 F-RRGKPSNHKVFGTATAILAGDALLTFAFNILSKLNLP----PDKVLKIIEVISQGAGH 152
Query: 191 QGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKK----KEGRLHACGAACGAILGG 246
G+V GQ +L+ D E++ E KK K G L GA
Sbjct: 153 NGMVGGQVLDLEAE-------------DKEISLEELKKIHSGKTGALFKSSILAGAYCAN 199
Query: 247 GSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVN 293
E+ L RY Y+G+ IV L T E L K + E+N
Sbjct: 200 PDRTELTALERYARYLGLTFQIVDDILDVTGNEEVLGKRVGRDDELN 246
>gi|445063263|ref|ZP_21375494.1| geranylgeranyl pyrophosphate synthase [Brachyspira hampsonii 30599]
gi|444505355|gb|ELV05886.1| geranylgeranyl pyrophosphate synthase [Brachyspira hampsonii 30599]
Length = 294
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 95/194 (48%), Gaps = 15/194 (7%)
Query: 71 EPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTS 130
E +++ + A + P L ACE+ G +++I+ A AL ++H S +H++LP D
Sbjct: 35 EMLKYPLDAGGKRLRPILTCLACEIFEGDYKKSIIPAVALELIHTYSLVHDDLPAMDNDD 94
Query: 131 LIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGS 190
L + KPT + + +LV D +L +LL+ +D + +++ E++ A G
Sbjct: 95 L-RRGKPTTHVKYGEANAILVGDGLLTHAFQLLSKADVK----DSTLRKLLFELSYAAGI 149
Query: 191 QGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEK 250
G+V GQ+ +L + +++N +M + KK G + GAI ++
Sbjct: 150 NGMVMGQFIDLYYEE-----KEIN----FDMLKILHAKKTGAMIRGAVRLGAI-SSENDN 199
Query: 251 EIELLRRYGFYVGM 264
+IE + +Y VG+
Sbjct: 200 DIENITKYAEAVGL 213
>gi|297616623|ref|YP_003701782.1| polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680]
gi|297144460|gb|ADI01217.1| Polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680]
Length = 301
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 10/199 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++ M + VF + P L + + ++VG +A+ A A+ ++H+ S +H++LP
Sbjct: 34 PQVIHRAMHYAVFNGGKRLRPILVLESAQVVGKDLTRALPVACAMEMIHSYSLVHDDLPA 93
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D L + KPT + F +L DA+L E++ + G + +V+ E
Sbjct: 94 MDDDDL-RRGKPTCHKVFGEANAILTGDALLTLAFEIMTACAELPGMEPRYVAKVVRETA 152
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
RA+GS G+V GQ +L+ D D L + + KK G L GA+L
Sbjct: 153 RAVGSLGMVGGQVLDLELEGKDTDFFTLKTL---------HSKKTGALFRACLRAGALLF 203
Query: 246 GGSEKEIELLRRYGFYVGM 264
G ++ ++ L RY G+
Sbjct: 204 GVEDERLQALTRYAENFGL 222
>gi|258405879|ref|YP_003198621.1| polyprenyl synthetase [Desulfohalobium retbaense DSM 5692]
gi|257798106|gb|ACV69043.1| Polyprenyl synthetase [Desulfohalobium retbaense DSM 5692]
Length = 292
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 13/199 (6%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P +YE MR+ + A + P LC+ EL+GG R+ + A+ L +H S +H++LP
Sbjct: 27 PATLYESMRYSLLAGGKRVRPVLCLVWAELLGGDRQAVLPFASGLECIHTYSLVHDDLPA 86
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D L + KP+ + F +L D +L EL+ +D PA R++R +
Sbjct: 87 MDDDDL-RRGKPSNHKQFGEAMAILAGDGLLTHAFELMLHADLPA----ERLVRAAGLVA 141
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
A G+ G++ GQ ++Q + +G T+VE + K G L GA+L
Sbjct: 142 GAAGASGMIGGQVTDIQLTG--------SGATNVEDLRAMHGMKTGALLQVACTSGAVLA 193
Query: 246 GGSEKEIELLRRYGFYVGM 264
G E++I+ YG +G+
Sbjct: 194 GAIEEDIQRAATYGGALGL 212
>gi|393778039|ref|ZP_10366322.1| geranyltranstransferase [Ralstonia sp. PBA]
gi|392714925|gb|EIZ02516.1| geranyltranstransferase [Ralstonia sp. PBA]
Length = 300
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 102/224 (45%), Gaps = 12/224 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++E MR+ + P L AA + G AAAA+ ++HA S +H+++P
Sbjct: 30 PARLHEAMRYAALGGGKRVRPLLVHAAGAVSGATPAALDAAAAAVEMIHAYSLVHDDMPC 89
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D L + +PT++ A+ T LLV DA+ E+LA D +G L ++VE+
Sbjct: 90 MDDDDL-RRGRPTVHKAYDEATALLVGDALQTQAFEVLAGGDGGTDLAAGVRLALVVELA 148
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYET-YKKKEGRLHACGAACGAIL 244
+A GSQG+ GQ +LQ G+ ET ++KK G L G +
Sbjct: 149 QASGSQGMAGGQAIDLQSV----------GLALSREALETMHRKKTGALLRASVRMGGLC 198
Query: 245 GGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
G S LL RY +G+ +V L T + L K A K
Sbjct: 199 GNLSGDARGLLDRYAQAMGLAFQVVDDILDVTADTATLGKTAGK 242
>gi|443622484|ref|ZP_21107009.1| putative Polyprenyl synthatase [Streptomyces viridochromogenes
Tue57]
gi|443344012|gb|ELS58129.1| putative Polyprenyl synthatase [Streptomyces viridochromogenes
Tue57]
Length = 342
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 19/189 (10%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
PAL V + E+ G E I A A+ ++H S +H++L D + + T++ P
Sbjct: 57 PALAVLSAEVTGAAPEVGIPGAVAVELVHNFSLLHDDLMDGDEQR---RHRDTVWKVHGP 113
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
+LV DA+ E+L +GR R + TRA+ ++GQ ++
Sbjct: 114 AQAILVGDALFALANEVLLELGTV---EAGRAARRLTTATRAL-----IDGQAQDISYEH 165
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
D VE E K G L AC ++ GA+LGG + + L +YG+++G+
Sbjct: 166 RDR--------VSVEECLEMEGNKTGALLACASSIGAVLGGADDGTADTLEKYGYHLGLA 217
Query: 266 QGIVSRRLG 274
V LG
Sbjct: 218 FQAVDDLLG 226
>gi|49086036|gb|AAT51323.1| PA4043, partial [synthetic construct]
Length = 296
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 95/203 (46%), Gaps = 14/203 (6%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
+E +YE MR+ V + P L AACE +GG ++A AA A+ ++HA S +H++L
Sbjct: 26 EELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDL 85
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASS-DNPAGNNSGRILRVMV 182
P D L + +PT + AF T +L AD + E+LA + NP L ++
Sbjct: 86 PAMDDDDL-RRGQPTTHRAFDEATAILAADGLQALAFEVLADTRRNP--QEHAVCLEMLT 142
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+ RA GS G+V GQ +L D L + ++ K G L GA
Sbjct: 143 RLARAAGSAGMVGGQAIDLGSVGVALDQAALEVM---------HRHKTGALIEASVRLGA 193
Query: 243 ILGGGSE-KEIELLRRYGFYVGM 264
+ G +E + L RY +G+
Sbjct: 194 LASGRAEPASLAALERYAEAIGL 216
>gi|374703984|ref|ZP_09710854.1| farnesyl-diphosphate synthase [Pseudomonas sp. S9]
Length = 295
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 16/226 (7%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEP--VEVYEPMRHFVFAAPVNMAPALCVAACELVGGHR 100
++Y + A L + V +P +Y+ +R+ V + P L AACE +GG+
Sbjct: 3 EAYQAQCQNRVDAALERLFVAPQPELQRLYQAIRYSVTNGGKRVRPLLAYAACEALGGNV 62
Query: 101 EQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGL 160
E A AA A+ ++HA S +H++LP D L + KPT + AF +L D +
Sbjct: 63 EHANGAACAVELIHAYSLVHDDLPAMDDDDL-RRGKPTTHKAFDEAAAILAGDGLQTLAF 121
Query: 161 ELLASSD-NPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDV 219
E+L +++ NP +++G L ++ + RA G G+V GQ +L D L +
Sbjct: 122 EVLGNAELNP--HSAGLRLAMIATLARASGPAGMVGGQAIDLGSVGQALDQAALENM--- 176
Query: 220 EMTYETYKKKEGRLHACGAACGAILGGGSE-KEIELLRRYGFYVGM 264
++ K G L A GA+ G ++ + L+RY +G+
Sbjct: 177 ------HRHKTGALIEASVALGALASGNADPATLAALQRYAQAIGL 216
>gi|126665230|ref|ZP_01736213.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17]
gi|126630600|gb|EBA01215.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17]
Length = 299
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 16/198 (8%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
+ + MR+ + + PALC+AA E VGG R+ A+ A AL ++HA S +H++LP D
Sbjct: 37 LQDAMRYGLLGGGKRIRPALCLAAAEAVGGQRQIALAPACALEMIHAYSLMHDDLPAMDN 96
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE-MTRA 187
L + + T + AF ++ +L DA+ +LA+ A S + MV+ + A
Sbjct: 97 DDL-RRGRATAHIAFDESSAILAGDALQAEAFRVLAT----APRLSAEVKLAMVKALANA 151
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G+ G+V GQ +L+ R L ++ ++ K G L GA+ GG
Sbjct: 152 CGANGMVGGQAIDLESVA-----RTLT----LDQLENMHRHKTGALIEASVHLGALAGGV 202
Query: 248 SEKE-IELLRRYGFYVGM 264
+ ++ L RY +G+
Sbjct: 203 KDPALLDALARYARALGL 220
>gi|418468164|ref|ZP_13038990.1| polyprenyl synthatase [Streptomyces coelicoflavus ZG0656]
gi|371551233|gb|EHN78555.1| polyprenyl synthatase [Streptomyces coelicoflavus ZG0656]
Length = 378
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
PAL V + E+ G E + A A+ ++H S +H++L D + + T++ P
Sbjct: 93 PALAVLSAEVTGAAPEVGVPGAVAVELVHNFSLLHDDLMDGDEQR---RHRDTVWKVHGP 149
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
+LV DA+ E+L + +GR R + + +R++ ++GQ ++
Sbjct: 150 AQAILVGDALFALANEVLLELGS---VEAGRATRRLTKASRSL-----IDGQAQDISYEH 201
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
D VE E K G L AC ++ GA+LGG E ++L +YG+++G+
Sbjct: 202 RDR--------VSVEECLEMEGNKTGALLACASSVGAVLGGADEHTADVLEKYGYHLGLA 253
Query: 266 QGIVSRRLG 274
V LG
Sbjct: 254 FQAVDDLLG 262
>gi|15599238|ref|NP_252732.1| geranyltranstransferase [Pseudomonas aeruginosa PAO1]
gi|107103557|ref|ZP_01367475.1| hypothetical protein PaerPA_01004627 [Pseudomonas aeruginosa PACS2]
gi|218889676|ref|YP_002438540.1| geranyltranstransferase [Pseudomonas aeruginosa LESB58]
gi|386056964|ref|YP_005973486.1| geranyltranstransferase [Pseudomonas aeruginosa M18]
gi|392982230|ref|YP_006480817.1| geranyltranstransferase [Pseudomonas aeruginosa DK2]
gi|418588459|ref|ZP_13152470.1| geranyltranstransferase [Pseudomonas aeruginosa MPAO1/P1]
gi|418592656|ref|ZP_13156522.1| geranyltranstransferase [Pseudomonas aeruginosa MPAO1/P2]
gi|419756862|ref|ZP_14283207.1| geranyltranstransferase [Pseudomonas aeruginosa PADK2_CF510]
gi|420137641|ref|ZP_14645606.1| geranyltranstransferase [Pseudomonas aeruginosa CIG1]
gi|421158077|ref|ZP_15617375.1| geranyltranstransferase [Pseudomonas aeruginosa ATCC 25324]
gi|421518592|ref|ZP_15965266.1| geranyltranstransferase [Pseudomonas aeruginosa PAO579]
gi|424939078|ref|ZP_18354841.1| geranyltranstransferase [Pseudomonas aeruginosa NCMG1179]
gi|9950239|gb|AAG07430.1|AE004821_3 geranyltranstransferase [Pseudomonas aeruginosa PAO1]
gi|218769899|emb|CAW25660.1| geranyltranstransferase [Pseudomonas aeruginosa LESB58]
gi|346055524|dbj|GAA15407.1| geranyltranstransferase [Pseudomonas aeruginosa NCMG1179]
gi|347303270|gb|AEO73384.1| geranyltranstransferase [Pseudomonas aeruginosa M18]
gi|375040746|gb|EHS33484.1| geranyltranstransferase [Pseudomonas aeruginosa MPAO1/P1]
gi|375048528|gb|EHS41049.1| geranyltranstransferase [Pseudomonas aeruginosa MPAO1/P2]
gi|384396617|gb|EIE43035.1| geranyltranstransferase [Pseudomonas aeruginosa PADK2_CF510]
gi|392317735|gb|AFM63115.1| geranyltranstransferase [Pseudomonas aeruginosa DK2]
gi|403249617|gb|EJY63108.1| geranyltranstransferase [Pseudomonas aeruginosa CIG1]
gi|404348074|gb|EJZ74423.1| geranyltranstransferase [Pseudomonas aeruginosa PAO579]
gi|404550013|gb|EKA58821.1| geranyltranstransferase [Pseudomonas aeruginosa ATCC 25324]
Length = 295
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 95/203 (46%), Gaps = 14/203 (6%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
+E +YE MR+ V + P L AACE +GG ++A AA A+ ++HA S +H++L
Sbjct: 26 EELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDL 85
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASS-DNPAGNNSGRILRVMV 182
P D L + +PT + AF T +L AD + E+LA + NP L ++
Sbjct: 86 PAMDDDDL-RRGQPTTHRAFDEATAILAADGLQALAFEVLADTRRNP--QEHAVCLEMLT 142
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+ RA GS G+V GQ +L D L + ++ K G L GA
Sbjct: 143 RLARAAGSAGMVGGQAIDLGSVGVALDQAALEVM---------HRHKTGALIEASVRLGA 193
Query: 243 ILGGGSE-KEIELLRRYGFYVGM 264
+ G +E + L RY +G+
Sbjct: 194 LASGRAEPASLAALERYAEAIGL 216
>gi|390442965|ref|ZP_10230764.1| polyprenyl synthetase [Nitritalea halalkaliphila LW7]
gi|389667273|gb|EIM78696.1| polyprenyl synthetase [Nitritalea halalkaliphila LW7]
Length = 330
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 23/231 (9%)
Query: 34 MAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAAC 93
M + T + + ++ E I + A EP +YEP+R+ + + P L +
Sbjct: 1 MTLKTRDSVQDLQRAIEEKITQYPYGA----EPESLYEPIRYLLAIGGKRLRPVLTLLGY 56
Query: 94 ELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVAD 153
L E+ + AAA+ V H + +H++ + D+ L + KPT++ + NT +L D
Sbjct: 57 RLFASATEEVLTPAAAVEVFHNFTLMHDD--IMDKAPL-RRGKPTVHERWDANTAILSGD 113
Query: 154 AMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKL 213
ML ++L D GR L+ M+ ++ V EGQ ++ Q D
Sbjct: 114 VMLVKAYDMLLEMD-------GRYLKQMLLRFNRTAAE-VCEGQQLDMNFEQMD------ 159
Query: 214 NGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
E + K L GA LGG S++E+ L +G YVG+
Sbjct: 160 --TVSEEQYIHMIRLKTAVLLGFALELGATLGGASKEEVAKLYDFGVYVGI 208
>gi|291435805|ref|ZP_06575195.1| polyprenyl synthatase [Streptomyces ghanaensis ATCC 14672]
gi|291338700|gb|EFE65656.1| polyprenyl synthatase [Streptomyces ghanaensis ATCC 14672]
Length = 379
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 19/189 (10%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
PAL V + E+ G + + A A+ ++H S +H++L D + + T++ P
Sbjct: 94 PALAVLSAEVTGAAPQTGVPGAVAVELVHNFSLLHDDLMDGDEQR---RHRDTVWKVHGP 150
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
+LV DA+ E+L ++GR R + +RA+ ++GQ ++
Sbjct: 151 AQAILVGDALFALANEVLLELGT---VDAGRAARRLTTASRAL-----IDGQAQDISYEH 202
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
D VE E K G L AC ++ GA+LGG E+ + L +YG+++G+
Sbjct: 203 RDR--------VSVEECLEMEGNKTGALLACASSIGAVLGGADERTADSLEKYGYHLGLA 254
Query: 266 QGIVSRRLG 274
V LG
Sbjct: 255 FQAVDDLLG 263
>gi|354558197|ref|ZP_08977453.1| Polyprenyl synthetase [Desulfitobacterium metallireducens DSM
15288]
gi|353548922|gb|EHC18366.1| Polyprenyl synthetase [Desulfitobacterium metallireducens DSM
15288]
Length = 288
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 13/194 (6%)
Query: 71 EPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTS 130
+ MR+ + + P L +AA E VGG + + +A AL ++H S IH++LP D
Sbjct: 29 QSMRYSLVGGGKRIRPVLALAAAEAVGGQADSILPSACALELIHTYSLIHDDLPAMDNDD 88
Query: 131 LIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGS 190
+ + + F +L D +L + EL+A P N+ R LRV+ E+ +A G
Sbjct: 89 -YRRGRLANHKVFGEGKAILAGDGLLTYAFELIA---RPLPVNAERQLRVIQEVAQAAGP 144
Query: 191 QGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEK 250
+G+V GQ +L+ + K + ++E + ++ K G + A G ILGGG+E
Sbjct: 145 EGMVLGQVLDLEA------EGKTLTLGEIE---QIHQHKTGAMLVVSARMGGILGGGTEA 195
Query: 251 EIELLRRYGFYVGM 264
+I+ L RY +G+
Sbjct: 196 QIQALTRYAQALGL 209
>gi|423016477|ref|ZP_17007198.1| geranyltranstransferase [Achromobacter xylosoxidans AXX-A]
gi|338780419|gb|EGP44827.1| geranyltranstransferase [Achromobacter xylosoxidans AXX-A]
Length = 303
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 101/226 (44%), Gaps = 22/226 (9%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAA---CELVGG--HREQAI-VAAAALHVMHAASFI 119
P ++E MR+ V + AL AA C + G E ++ AAAA+ ++HA S +
Sbjct: 34 PARLHEAMRYAVLGGGKRVRAALVYAAGQACPVSGSVLAVEASLDRAAAAVELIHAYSLV 93
Query: 120 HENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD-NPAGNNSGRIL 178
H++LP D ++ + +PT + F T +L DA+ P ELLAS PA I+
Sbjct: 94 HDDLPCMD-DDVLRRGRPTTHVQFDEATAMLAGDALQPLAFELLASMPIAPA-----LIV 147
Query: 179 RVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGA 238
+ + RA GSQG+ GQ +L + + + + K G + AC
Sbjct: 148 QATQSLARAAGSQGMAGGQAIDL---------LSVGHRLSRDELQQMHSMKTGAMLACSV 198
Query: 239 ACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
A G I+ G S + L Y +G+ +V L T + L K
Sbjct: 199 ALGGIVAGASSASRQALDIYAQAMGLAFQVVDDILDVTADSASLGK 244
>gi|242399212|ref|YP_002994636.1| Bifunctional short chain isoprenyl diphosphate synthase
[Thermococcus sibiricus MM 739]
gi|242265605|gb|ACS90287.1| Bifunctional short chain isoprenyl diphosphate synthase
[Thermococcus sibiricus MM 739]
Length = 341
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 25/205 (12%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
KEP +Y+ RH+ A + P + + + E VGG+ E+A+ AAAA+ ++H S +H+++
Sbjct: 28 KEPKIIYDAARHYPLAGGKRIRPFIVLTSTEAVGGNPEKAVYAAAAVELLHNYSLVHDDI 87
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE 183
D + +PT++ + N +L D + E +A ++ VE
Sbjct: 88 MDMDEKR---RGRPTVHKVWGVNMAILAGDLLFSKVFEAVA--------------KIPVE 130
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKK----KEGRLHACGAA 239
+ + V+ NEL C+ R L +T + Y K K G L A
Sbjct: 131 AEKVVKVLDVISKTSNEL----CEGQARDLEFENKETVTIDEYMKMISGKTGALIDASAT 186
Query: 240 CGAILGGGSEKEIELLRRYGFYVGM 264
G ++G + + I+ L +YG VG+
Sbjct: 187 IGGLIGTENNEYIQALSKYGRNVGI 211
>gi|416877744|ref|ZP_11919959.1| geranyltranstransferase [Pseudomonas aeruginosa 152504]
gi|334839219|gb|EGM17911.1| geranyltranstransferase [Pseudomonas aeruginosa 152504]
Length = 295
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 95/203 (46%), Gaps = 14/203 (6%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
+E +YE MR+ V + P L AACE +GG ++A AA A+ ++HA S +H++L
Sbjct: 26 EELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDL 85
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASS-DNPAGNNSGRILRVMV 182
P D L + +PT + AF T +L AD + E+LA + NP L ++
Sbjct: 86 PAMDDDDL-RRGQPTTHRAFDEATAILAADGLQALAFEVLADTRRNP--QEHAVCLEMLT 142
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+ RA GS G+V GQ +L D L + ++ K G L GA
Sbjct: 143 RLARAAGSAGMVGGQAIDLGSVGVALDQAALEVM---------HRHKTGALIEASVRLGA 193
Query: 243 ILGGGSE-KEIELLRRYGFYVGM 264
+ G +E + L RY +G+
Sbjct: 194 LASGRAEPATLAALERYAEAIGL 216
>gi|262382413|ref|ZP_06075550.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|262295291|gb|EEY83222.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 324
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 21/220 (9%)
Query: 46 WTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIV 105
+ ++ + I + + Q P +YEP+ + + + PAL + AC + E AI
Sbjct: 4 FENILQRIESEISQLQFTNPPKSLYEPIEYILSLGGKRIRPALTLMACNIYNNSIENAIK 63
Query: 106 AAAALHVMHAASFIHENL-PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA 164
A L V H + +H++L +D+ ++KPT++ + NT +L DAML +L+
Sbjct: 64 PALGLEVFHNFTLLHDDLMDEADKR----RNKPTVHKVWNANTAILSGDAMLIAAYQLIG 119
Query: 165 SSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYE 224
S+++ G + +V+ T+ + GQ +++ D E E
Sbjct: 120 STEH------GHLKQVLDLFTQTAAE--ICGGQQFDMEFESRMD--------VSEEEYIE 163
Query: 225 TYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
+ K L AC GA+LGG S+++ L +G +G+
Sbjct: 164 MIRLKTAVLLACSLKTGALLGGASQEDASNLYAFGINIGL 203
>gi|357386067|ref|YP_004900791.1| multifunctional octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase
[Pelagibacterium halotolerans B2]
gi|351594704|gb|AEQ53041.1| octaprenyl-diphosphate synthase / dimethylallyltransferase /
geranyltranstransferase (farnesyldiphosphate synthase) /
geranylgeranyl pyrophosphate synthetase [Pelagibacterium
halotolerans B2]
Length = 306
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 97/238 (40%), Gaps = 19/238 (7%)
Query: 53 IGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHV 112
+ AHL + P + M H + P L + L E+++ AAL +
Sbjct: 31 LAAHL---ATLDAPERLLAAMAHGALDGGKRLRPFLVRLSASLFAVPHEKSLAVGAALEM 87
Query: 113 MHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGN 172
+H S +H++LP D L + KPT++ AF P +L DA+L LL SD
Sbjct: 88 IHCYSLVHDDLPDMDNDEL-RRGKPTVWKAFDPALAILAGDALLTEAFALL--SDPRTHP 144
Query: 173 NSGRILRVMVEMTRAMGSQGVVEGQYNEL--QCSQCDDDDRKLNGITDVEMTYETYKKKE 230
+ +++ + A G G+V GQ ++ + S D+D + KK
Sbjct: 145 DPAIRAELVLTLAHAAGPAGMVGGQVLDIEGETSPLDED-----------AIFAMQAKKT 193
Query: 231 GRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
G L G GAILG S + L R+G G+ I L T L K A K
Sbjct: 194 GALIRAGVEMGAILGNASPAQRSGLTRFGTAAGLAFQIADDILDVTATSHALGKTAGK 251
>gi|254472285|ref|ZP_05085685.1| geranyltranstransferase [Pseudovibrio sp. JE062]
gi|211958568|gb|EEA93768.1| geranyltranstransferase [Pseudovibrio sp. JE062]
Length = 301
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
V P + E M + + + P L V A L G E +VAA+AL +H S H++
Sbjct: 33 VARPERLLEAMNYAALSGGKRLRPVLMVEAARLFGHEDEGTLVAASALECIHCYSLAHDD 92
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D L + +PT + AF T +L DA+L + +A D ++ LR+
Sbjct: 93 LPAMDDDDL-RRGRPTTHKAFDEATAILAGDALLTIAFDFIA--DEQVHPDAAIRLRLSQ 149
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRL--HACGAAC 240
E+ RA G G+ GQ +L D + ++ + + K G L +AC A
Sbjct: 150 ELARASGIGGMAGGQMLDLASEHRDRTEAEIRQLQAM---------KTGALIRYACRA-- 198
Query: 241 GAILGGGSEKEIELLRRYGFYVGM 264
GAIL S+ +I L R+G +G+
Sbjct: 199 GAILANASDDDIARLTRFGEIIGL 222
>gi|374328535|ref|YP_005078719.1| polyprenyl synthetase [Pseudovibrio sp. FO-BEG1]
gi|359341323|gb|AEV34697.1| Polyprenyl synthetase [Pseudovibrio sp. FO-BEG1]
Length = 301
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 103/222 (46%), Gaps = 19/222 (8%)
Query: 48 SVHEDIGAHLRQAVVVKE---PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAI 104
S+ E + + L + V+ +E P + E M + + + P L V L G E +
Sbjct: 15 SLEEKLTSLLGEKVLPQEVARPKRLLEAMNYAALSGGKRLRPVLMVEVARLFGHEDEGTL 74
Query: 105 VAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA 164
VAA+AL +H S H++LP D L + +PT + AF T +L DA+L + +A
Sbjct: 75 VAASALECIHCYSLAHDDLPAMDDDDL-RRGRPTTHKAFDEATAILAGDALLTIAFDFIA 133
Query: 165 SSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYE 224
D ++ LR+ E+ RA G G+ GQ +L D + ++ + +
Sbjct: 134 --DEQVHPDAAIRLRLSQELARASGIGGMAGGQMLDLASEHRDRTEAEIRQLQAM----- 186
Query: 225 TYKKKEGRL--HACGAACGAILGGGSEKEIELLRRYGFYVGM 264
K G L +AC A GAIL SE +I L R+G +G+
Sbjct: 187 ----KTGALIRYACRA--GAILANASEDDIARLTRFGEIIGL 222
>gi|456358608|dbj|BAM93053.1| putative geranyltranstransferase [Agromonas oligotrophica S58]
Length = 307
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 12/202 (5%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + E MR+ + P L V + + G R A++A AAL +H S IH++
Sbjct: 37 IIRPKRLIESMRYSSLGGGKRLRPFLVVESAAVFGVPRRGALMAGAALECIHCYSLIHDD 96
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD-NPAGNNSGRILRVM 181
LP D + L + +PT++ A+ T +L DA+L +++ + +P ++G L +
Sbjct: 97 LPAMDNSDL-RRGRPTLHKAYDDATAILAGDALLTIAFDIITRDEIHP---DAGVRLALT 152
Query: 182 VEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACG 241
+ R G G+ GQ +L + DR + V+ + K G L G G
Sbjct: 153 RALARCAGVGGMAGGQILDL-AGEGRFGDRDPVDVARVQ------QMKTGALLRFGCIAG 205
Query: 242 AILGGGSEKEIELLRRYGFYVG 263
A+LG S E + L YG +G
Sbjct: 206 ALLGQASPAEYQALDDYGRALG 227
>gi|410667961|ref|YP_006920332.1| polyprenyl synthetase [Thermacetogenium phaeum DSM 12270]
gi|409105708|gb|AFV11833.1| polyprenyl synthetase [Thermacetogenium phaeum DSM 12270]
Length = 295
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 11/199 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++E MR+ FA + L +A ++G E+ + AAAA+ ++H S IH++
Sbjct: 29 PPVIHEAMRYSSFAGGKRLRGVLTLATAGMLGLEEERVLPAAAAIEMIHTYSLIHDD-LP 87
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
+ + +PT + F +L DA+L E L S G S +L+V+ E+
Sbjct: 88 AMDDDDYRRGRPTCHRVFGEAIAILAGDALLTLAFETL-SRLAEGGFASSVVLQVIQEVA 146
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
GS+G+V GQ +L+ D + L I ++ K G L GAIL
Sbjct: 147 SGAGSRGLVGGQVVDLESEGKDIEASVLEYI---------HRHKTGALFRAAIRSGAILA 197
Query: 246 GGSEKEIELLRRYGFYVGM 264
G +KE+ L Y G+
Sbjct: 198 GAGDKELTALTGYAEAFGL 216
>gi|251773174|gb|EES53727.1| Geranyltranstransferase [Leptospirillum ferrodiazotrophum]
Length = 297
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 99/225 (44%), Gaps = 10/225 (4%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
+E + E +R+ + A + P L +AA E VGG E + L ++H S +H++L
Sbjct: 28 REYGRLAEGIRYSLLAGGKRIRPVLALAAIEAVGGDGESLLPLTLPLELVHTYSLVHDDL 87
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE 183
P D L + +PT + + +L DA+L LL+ + R + V+ E
Sbjct: 88 PAMDNDDL-RRGRPTNHVVYGEAAAILAGDALLTHAFTLLSDPVYDKVLPASRRMEVVHE 146
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAI 243
++ A G G+V GQ+ ++ +T E+ ++ K G L G I
Sbjct: 147 LSSASGLCGMVGGQFLDIVSEG--------KNLTLPELE-NLHRHKTGALLRASVRIGGI 197
Query: 244 LGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
L G S + +E L RYG VG+ I L EEL K A K
Sbjct: 198 LAGASSEWVEALTRYGEAVGIAFQIADDLLDVLGTAEELGKAAQK 242
>gi|193214123|ref|YP_001995322.1| polyprenyl synthetase [Chloroherpeton thalassium ATCC 35110]
gi|193087600|gb|ACF12875.1| Polyprenyl synthetase [Chloroherpeton thalassium ATCC 35110]
Length = 335
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 103/220 (46%), Gaps = 23/220 (10%)
Query: 46 WTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIV 105
+ H I L+Q ++ KEP +YEP + + + P L + E + G + A+
Sbjct: 17 YLEFHTRINEELQQCLLGKEPKSLYEPATYILTGKGKRVRPVLVLLGAESICGTSDHALN 76
Query: 106 AAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLAS 165
A ++ V+H + IH++ + D +L + T++ + N +L D ML F EL
Sbjct: 77 LALSVEVLHNFTLIHDD--IMDNAAL-RHGRETVHLKWNENAAILSGDMMLAFAYELALK 133
Query: 166 SDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT--Y 223
+ NS R+ +++ +T++ + + EGQ ++ D + R TDV M+
Sbjct: 134 T------NSSRLTKILDVITQS--TIVICEGQTYDM-----DFEKR-----TDVTMSEYL 175
Query: 224 ETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVG 263
+ KK GRL A G + +++++ +L YG +G
Sbjct: 176 DMISKKTGRLIAASLELGGLAAEATDEQLAILTEYGELIG 215
>gi|372267523|ref|ZP_09503571.1| geranyltranstransferase [Alteromonas sp. S89]
Length = 300
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 112/249 (44%), Gaps = 17/249 (6%)
Query: 39 PNKNKSYWTSVHEDIGAHLRQAVVVKEPVE-VYEPMRHFVFAAPVNMAPALCVAACELVG 97
P K++ S + L A+ + E ++ M++ + PAL A+ +G
Sbjct: 2 PATLKAFLQSSSLQVERTLTAALSDESQAETLFAAMQYAALGPGKRLRPALVYASALALG 61
Query: 98 GHREQAIVAAAA--LHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAM 155
G AAA L +HA S +H++LP D +L + +PT + F T +L DA+
Sbjct: 62 GEACAENCHAAAAALECVHAYSLVHDDLPAMDDDAL-RRGRPTCHIQFDEATAILAGDAL 120
Query: 156 LPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNG 215
ELLA + A +R++ E+ RA G++G+V GQ +L D+ L
Sbjct: 121 QCQAFELLAGAPLAADLK----VRLIAELARASGARGMVAGQAIDLAAV-----DQSLT- 170
Query: 216 ITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGP 275
+E ++ K G L + A GA++GG +E ++ + RY +G+ + L
Sbjct: 171 ---LEQLKHMHRLKTGALISASARIGALIGGANEVQLAAITRYAEAIGLAFQVQDDILDV 227
Query: 276 TEEIEELKK 284
T E L K
Sbjct: 228 TANTETLGK 236
>gi|168184569|ref|ZP_02619233.1| geranyltranstransferase [Clostridium botulinum Bf]
gi|182672379|gb|EDT84340.1| geranyltranstransferase [Clostridium botulinum Bf]
Length = 290
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
++YE M + + A + P L + L ++A+ AAA+ ++H S IH++LP D
Sbjct: 28 KIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMD 87
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
L + KPT + F +L DA+L + ++ + N + L+ + +A
Sbjct: 88 NDDL-RRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEY---SLKNGEKALKACYTIAKA 143
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G G++ GQ ++ I+ E+ Y +KKK G L GAILG
Sbjct: 144 AGVDGMIGGQVVDILSED--------KSISLDELHY-MHKKKTGALIKASILAGAILGSA 194
Query: 248 SEKEIELLRRYGFYVGM 264
+ +IELL YG +G+
Sbjct: 195 TYTDIELLGEYGDNLGL 211
>gi|395788008|ref|ZP_10467584.1| hypothetical protein ME7_00919 [Bartonella birtlesii LL-WM9]
gi|395409790|gb|EJF76375.1| hypothetical protein ME7_00919 [Bartonella birtlesii LL-WM9]
Length = 300
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 12/226 (5%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + + MR+ V + P L + + L E + A AL +H S IH++
Sbjct: 32 ISRPEMLIKAMRYGVLNGGKRLRPFLVLQSSALFDIPAENVLDVACALECVHCYSLIHDD 91
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D ++ + KPT++ AF T +L +A+L F E +A ++ ++++
Sbjct: 92 LPAMDN-DILRRGKPTLHKAFDEATAILAGNALLTFAFETIAHKACTLSFDTK--IKLIT 148
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+ +A G G++ GQ +++ ++KL D+ +T + K AC A GA
Sbjct: 149 ALAQASGLGGMIGGQMLDIEA------EKKLQKSKDI-ITLQRMKTAALISFACQA--GA 199
Query: 243 ILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
++ S++ E L +G Y+G+ + L T E L K A K
Sbjct: 200 LIANASKELTEKLATFGTYLGLAFQLTDDLLDFTTSSEVLGKTAGK 245
>gi|256839153|ref|ZP_05544663.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|256740072|gb|EEU53396.1| conserved hypothetical protein [Parabacteroides sp. D13]
Length = 324
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 21/220 (9%)
Query: 46 WTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIV 105
+ ++ + I + + Q P +YEP+ + + + PAL + AC + E AI
Sbjct: 4 FENILQRIESEISQLQFTNPPKSLYEPIEYILSLGGKRIRPALTLMACNIYNNSIENAIK 63
Query: 106 AAAALHVMHAASFIHENL-PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA 164
A L V H + +H++L +D+ ++KPT++ + NT +L DAML +L+
Sbjct: 64 PALGLEVFHNFTLLHDDLMDEADKR----RNKPTVHKVWNANTAILSGDAMLIAAYQLIG 119
Query: 165 SSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYE 224
S+++ G + +V+ T+ + GQ +++ D + E E
Sbjct: 120 STEH------GHLKQVLDLFTQTAAE--ICGGQQFDMEFESRMD--------VNEEEYIE 163
Query: 225 TYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
+ K L AC GA+LGG S+++ L +G +G+
Sbjct: 164 MIRLKTAVLLACSLKTGALLGGASQEDAGNLYAFGINIGL 203
>gi|237795298|ref|YP_002862850.1| putative geranyltranstransferase [Clostridium botulinum Ba4 str.
657]
gi|229262575|gb|ACQ53608.1| putative geranyltranstransferase [Clostridium botulinum Ba4 str.
657]
Length = 290
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
++YE M + + A + P L + L ++A+ AAA+ ++H S IH++LP D
Sbjct: 28 KIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMD 87
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
L + KPT + F +L DA+L + ++ + N + L+ + +A
Sbjct: 88 NDDL-RRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEY---SLKNGEKALKACYTIAKA 143
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G G++ GQ ++ I+ E+ Y +KKK G L GAILG
Sbjct: 144 AGVDGMIGGQVVDILSED--------KSISLDELHY-MHKKKTGALIKASILAGAILGSA 194
Query: 248 SEKEIELLRRYGFYVGM 264
+ +IELL YG +G+
Sbjct: 195 TYTDIELLGEYGDNLGL 211
>gi|383648172|ref|ZP_09958578.1| polyprenyl synthatase [Streptomyces chartreusis NRRL 12338]
Length = 342
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 19/189 (10%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
PAL V + E++ E I A A+ ++H S +H++L D + + T++ P
Sbjct: 57 PALAVLSAEVMSAAPETGIPGAVAVELVHNFSLLHDDLMDGDEQR---RHRDTVWKVHGP 113
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
+LV DA+ E+L +GR R + TRA+ ++GQ ++
Sbjct: 114 AQAILVGDALFALANEVLLELGTV---EAGRATRRLTTATRAL-----IDGQAQDISYEH 165
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
D VE E K G L AC ++ GA+LGG ++ + L +YG+++G+
Sbjct: 166 RDR--------VTVEECLEMEGNKTGALLACASSIGAVLGGADDRTADTLEKYGYHLGLA 217
Query: 266 QGIVSRRLG 274
V LG
Sbjct: 218 FQAVDDLLG 226
>gi|254502825|ref|ZP_05114976.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11]
gi|222438896|gb|EEE45575.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11]
Length = 301
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + MRH + P L + A L G + + A AL ++H S +H++
Sbjct: 33 ISRPERLINAMRHGALNGGKRLRPVLVMDAAGLFGRADDGVVQAGCALELIHCYSLVHDD 92
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D L + +PT++ A+ T +L DA+L +++ +D +G LR+
Sbjct: 93 LPAMDDDDL-RRGQPTVHKAYDDATAILAGDALLTLAFDVI--TDEAVHPEAGIRLRLCR 149
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRL--HACGAAC 240
E+ RA G G+ GQ +L+ D + ++ + + K G L +AC A
Sbjct: 150 ELARASGIGGMAGGQMLDLESEHRDRSEAEIRHLQSM---------KTGALLRYACRA-- 198
Query: 241 GAILGGGSEKEIELLRRYGFYVGM 264
GAILG S+ ++E L R+G +G+
Sbjct: 199 GAILGDASDADVERLTRFGEIIGL 222
>gi|58617311|ref|YP_196510.1| geranyltranstransferase [Ehrlichia ruminantium str. Gardel]
gi|58416923|emb|CAI28036.1| Possible geranyltranstransferase [Ehrlichia ruminantium str.
Gardel]
Length = 276
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 119/250 (47%), Gaps = 32/250 (12%)
Query: 73 MRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLI 132
M++ +F + P L A+ ++ + ++ + + A+ ++H S IH++LP D
Sbjct: 37 MKYSLFTPGKYIRPFLVNASAQIFNVNIDRTLPVSVAIELIHVYSLIHDDLPGMDNED-T 95
Query: 133 PKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQG 192
+ + + + F +L DA+L E+L S+ N + RI++V +T+A+G QG
Sbjct: 96 RRGQLSSHKKFTEAIAILTGDALLTLAFEVL-STINESPYIRCRIIQV---LTQAIGYQG 151
Query: 193 VVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHAC--GAAC--GAILGGGS 248
+++GQ + + D +D K T T K AC AAC G ILGG S
Sbjct: 152 MIKGQVLDTETIAKDINDIK---------TMHTLKT------ACLFSAACEVGGILGGAS 196
Query: 249 EKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVNSFNDENAE-VIFSLV 307
+ E+ L+ YG +G I ++I ++ K K +N + E+ E I S+V
Sbjct: 197 DTELNSLKNYGLNLGFAFQI-------KDDIADICKDISKNNILNILSKEDTENYIRSIV 249
Query: 308 DDNITHVLGF 317
D +I ++ F
Sbjct: 250 DKSIEYLAIF 259
>gi|420247661|ref|ZP_14751056.1| geranylgeranyl pyrophosphate synthase [Burkholderia sp. BT03]
gi|398070555|gb|EJL61849.1| geranylgeranyl pyrophosphate synthase [Burkholderia sp. BT03]
Length = 293
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 100/226 (44%), Gaps = 17/226 (7%)
Query: 65 EPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLP 124
EP ++E MR+ V + P LC AA EL G E A+AAL ++H S +H+++P
Sbjct: 28 EPARLHEAMRYAVLGGGKRVRPLLCHAAGELTGAKAECLDAASAALEMIHVYSLVHDDMP 87
Query: 125 LSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEM 184
D L + KPT++ + T LLV DA+ L +SD A ++R E+
Sbjct: 88 CMDDDEL-RRGKPTVHVKYDEATALLVGDALQSQAFVAL-TSDVLAPAQQAALVR---EL 142
Query: 185 TRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYET-YKKKEGRLHACGAACGAI 243
A GS G+ GQ +L G T ET ++ K G L GA+
Sbjct: 143 ALASGSIGMAGGQAIDLASV----------GHTLTRPQLETMHRLKTGALLRAAVRMGAL 192
Query: 244 LGGGSE-KEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
G + K ++ L Y VG+ +V L T + L K A K
Sbjct: 193 TGETPDAKALQSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGK 238
>gi|269103247|ref|ZP_06155944.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase
[Photobacterium damselae subsp. damselae CIP 102761]
gi|268163145|gb|EEZ41641.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase
[Photobacterium damselae subsp. damselae CIP 102761]
Length = 299
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 13/197 (6%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
+ + M++ + P L ++G + E AAA+ +HA S IH++LP D
Sbjct: 35 LLKAMKYGALLGGKRVRPFLTYVTGNMLGVNEENLDTPAAAIECIHAYSLIHDDLPAMDD 94
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
L + +PT + AF T +L DA+ E+LA S RI +++ E+ +A
Sbjct: 95 DEL-RRGQPTCHIAFDEATAVLAGDALQTLAFEILAEGTLSIDGESQRI-KMIKELAQAS 152
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
G+ G+ GQ +L D + K G+T +E + +K K G L C GA+ G
Sbjct: 153 GAAGMCMGQALDL------DGEGKHLGLTQLE---QIHKHKTGALIRCAVRLGALAAG-- 201
Query: 249 EKEIELLRRYGFYVGMI 265
EK +E+L + Y I
Sbjct: 202 EKGLEILPQLNTYAEAI 218
>gi|57239293|ref|YP_180429.1| geranyltranstransferase [Ehrlichia ruminantium str. Welgevonden]
gi|58579257|ref|YP_197469.1| geranyltranstransferase [Ehrlichia ruminantium str. Welgevonden]
gi|57161372|emb|CAH58295.1| putative geranyltranstransferase [Ehrlichia ruminantium str.
Welgevonden]
gi|58417883|emb|CAI27087.1| Possible geranyltranstransferase [Ehrlichia ruminantium str.
Welgevonden]
Length = 276
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 119/250 (47%), Gaps = 32/250 (12%)
Query: 73 MRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLI 132
M++ +F + P L A+ ++ + ++ + + A+ ++H S IH++LP D
Sbjct: 37 MKYSLFTPGKYIRPFLVNASAQIFNVNIDRTLPVSVAIELIHVYSLIHDDLPGMDNED-T 95
Query: 133 PKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQG 192
+ + + + F +L DA+L E+L S+ N + RI++V +T+A+G QG
Sbjct: 96 RRGQLSSHKKFTEAIAILTGDALLTLAFEVL-STINESPYIRCRIIQV---LTQAIGYQG 151
Query: 193 VVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHAC--GAAC--GAILGGGS 248
+++GQ + + D +D K T T K AC AAC G ILGG S
Sbjct: 152 MIKGQVLDTETIAKDINDIK---------TMHTLKT------ACLFSAACEVGGILGGAS 196
Query: 249 EKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVNSFNDENAE-VIFSLV 307
+ E+ L+ YG +G I ++I ++ K K +N + E+ E I S+V
Sbjct: 197 DTELNSLKNYGLNLGFAFQI-------KDDIADICKDISKNNILNILSKEDTENYIRSIV 249
Query: 308 DDNITHVLGF 317
D +I ++ F
Sbjct: 250 DKSIEYLAIF 259
>gi|365891994|ref|ZP_09430344.1| putative Geranyltranstransferase (Farnesyl-diphosphate synthase)
(FPP synthase) [Bradyrhizobium sp. STM 3809]
gi|365332002|emb|CCE02875.1| putative Geranyltranstransferase (Farnesyl-diphosphate synthase)
(FPP synthase) [Bradyrhizobium sp. STM 3809]
Length = 306
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + E MR+ + P L V + + G R A++A AAL +H S IH++
Sbjct: 36 IARPKRLIESMRYSSLGGGKRLRPFLVVESAAVFGVPRRGALLAGAALECIHCYSLIHDD 95
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD-NPAGNNSGRILRVM 181
LP D + L + +PT++ + T +L DA+L +++ + +P ++G L +
Sbjct: 96 LPAMDNSDL-RRGRPTLHKVYDDATAILAGDALLTIAFDIITRDEIHP---DAGVRLALT 151
Query: 182 VEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACG 241
+ R G G+ GQ +L + DR + V+ + K G L G G
Sbjct: 152 RALARCAGVGGMAGGQILDL-AGEGRFGDRDPVDVARVQ------QMKTGALLRFGCIAG 204
Query: 242 AILGGGSEKEIELLRRYGFYVG 263
A+LG S E + L YG +G
Sbjct: 205 ALLGQASAAEYQALDDYGRALG 226
>gi|339484559|ref|YP_004696345.1| Polyprenyl synthetase [Nitrosomonas sp. Is79A3]
gi|338806704|gb|AEJ02946.1| Polyprenyl synthetase [Nitrosomonas sp. Is79A3]
Length = 297
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 9/139 (6%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P +++ MR+ V + P L AA EL ++ +V AAA+ ++HA S +H++LP
Sbjct: 31 PERLHKAMRYSVLGGGKRVRPLLSFAAGELALADTDRVMVVAAAVELIHAYSLVHDDLPC 90
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLAS---SDNPAGNNSGRILRVMV 182
D ++ + KPT + F T LL D++ ELLA +D P G L ++
Sbjct: 91 MD-DDILRRGKPTCHIEFDEATALLTGDSLQTLAFELLAEKCLADEP-----GTQLEMIA 144
Query: 183 EMTRAMGSQGVVEGQYNEL 201
++ A GS+G+ GQ +L
Sbjct: 145 QLAVAAGSRGMAGGQAFDL 163
>gi|388567037|ref|ZP_10153476.1| farnesyl-diphosphate synthase [Hydrogenophaga sp. PBC]
gi|388265742|gb|EIK91293.1| farnesyl-diphosphate synthase [Hydrogenophaga sp. PBC]
Length = 327
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 118/286 (41%), Gaps = 20/286 (6%)
Query: 8 LNLPAHVAPRRNHSRPSLSYRPMMVTMAMSTPNKNKSY--WTSVHED-IGAHLRQAVVVK 64
+N+ H AP S P P A + + +++ W +V + + L + V
Sbjct: 1 MNMDPH-APSLRESMPPEGAEPPWGGPAAARLVQEQTFVQWRAVQQAAVEQALSRWVPSD 59
Query: 65 EPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLP 124
P + + MR+ V + P L +A CE VGG + A+ AA ++ ++HA S +H+++P
Sbjct: 60 APAGLGDAMRYAVLDGGKRLRPLLVLATCEAVGGQADAAMRAACSVELIHAYSLVHDDMP 119
Query: 125 LSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNP-AGNNSGRILRVMVE 183
D ++ + KPT++ F LL DA+ ELL D A S R+ R++
Sbjct: 120 CMD-NDVLRRGKPTVHVKFGEAQALLAGDALQALAFELLVPGDGSLADAMSARLCRLLAL 178
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGIT-DVEMTYETYKKKEGRLHACGAACGA 242
A G G + GI D+ +++K G L GA
Sbjct: 179 AAGADGMAGGQAVDLASV-------------GIALDLAALEAMHRRKTGALLQASVTMGA 225
Query: 243 ILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
G + + L YG VG+ +V L T + L K A K
Sbjct: 226 ATGVVARDTLAALTEYGACVGLAFQVVDDILDVTADSSTLGKTAGK 271
>gi|323344513|ref|ZP_08084738.1| polyprenyl synthetase [Prevotella oralis ATCC 33269]
gi|323094640|gb|EFZ37216.1| polyprenyl synthetase [Prevotella oralis ATCC 33269]
Length = 323
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 19/209 (9%)
Query: 56 HLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHA 115
+L ++P +YEP+++ + + P L + A L + + +A A+ H
Sbjct: 13 YLDNLQYARKPHTLYEPIKYVLSLGGKRIRPTLMLLAYNLYKDDPQSILSSACAIETYHN 72
Query: 116 ASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSG 175
+ +H++L + I + +PT++ + NT +L D+ML +A D G+
Sbjct: 73 YTLLHDDLM---DNAAIRRGRPTVHKKWDANTAILSGDSMLVLAYHYMAQCD---GSKLK 126
Query: 176 RILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHA 235
++ + E +G EGQ Q D D N +T+ E E + K L A
Sbjct: 127 EVIDLFTETALEIG-----EGQ-------QLDMDFETRNDVTEAEYI-EMIRLKTSVLLA 173
Query: 236 CGAACGAILGGGSEKEIELLRRYGFYVGM 264
C GAIL G S ++ + L R+G +G+
Sbjct: 174 CSLKIGAILAGSSAEDADYLYRFGEQIGL 202
>gi|365882602|ref|ZP_09421807.1| putative Geranyltranstransferase (Farnesyl-diphosphate synthase)
(FPP synthase) [Bradyrhizobium sp. ORS 375]
gi|365289044|emb|CCD94338.1| putative Geranyltranstransferase (Farnesyl-diphosphate synthase)
(FPP synthase) [Bradyrhizobium sp. ORS 375]
Length = 306
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 12/202 (5%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + E MR+ + P L V + + G R+ A++A AAL +H S IH++
Sbjct: 36 IARPKRLIESMRYSSLGGGKRLRPFLVVESAAVFGVPRKGALLAGAALECIHCYSLIHDD 95
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD-NPAGNNSGRILRVM 181
LP D + L + +PT++ + T +L DA+L +++ + +P ++G L +
Sbjct: 96 LPAMDNSDL-RRGRPTLHKVYDDATAILAGDALLTIAFDIITRDEIHP---DAGVRLALT 151
Query: 182 VEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACG 241
+ R G G+ GQ +L + DR + V+ + K G L G G
Sbjct: 152 RALARCAGVGGMAGGQILDL-AGEGRFGDRDPVDVARVQ------QMKTGALLRFGCIAG 204
Query: 242 AILGGGSEKEIELLRRYGFYVG 263
A+LG S E + L YG +G
Sbjct: 205 ALLGQASPAEYQALDDYGRALG 226
>gi|421596018|ref|ZP_16039932.1| geranyltranstransferase [Bradyrhizobium sp. CCGE-LA001]
gi|404271868|gb|EJZ35634.1| geranyltranstransferase [Bradyrhizobium sp. CCGE-LA001]
Length = 307
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 10/201 (4%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + + MR+ + P L V + + G RE A++ AAL +H S IH++
Sbjct: 37 IARPKRLMDAMRYSSLNGGKRLRPFLVVESAAVFGVPREAALLVGAALECIHCYSLIHDD 96
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D + L + +PT++ T +L D +L +++ + D + + R+L +
Sbjct: 97 LPAMDNSDL-RRGRPTLHKKTDDATAILAGDGLLTLAFDIV-TRDEIHRDANVRLL-LTR 153
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+ R G G+V GQ +L + G +++ + K G L G GA
Sbjct: 154 ALARCAGIGGMVGGQILDLAGEG------RFGGNEPIDVA-RIQQMKTGALLRYGCIAGA 206
Query: 243 ILGGGSEKEIELLRRYGFYVG 263
ILG S+KE + L YG +G
Sbjct: 207 ILGQASQKEYQALDDYGRALG 227
>gi|374596412|ref|ZP_09669416.1| Polyprenyl synthetase [Gillisia limnaea DSM 15749]
gi|373871051|gb|EHQ03049.1| Polyprenyl synthetase [Gillisia limnaea DSM 15749]
Length = 324
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 99/218 (45%), Gaps = 19/218 (8%)
Query: 47 TSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVA 106
T E +L + ++ KEP +YEP+ + + + P L + A E+ E+++ A
Sbjct: 5 TQYREAFLGYLNKKIITKEPANLYEPITYILNLGGKRLRPVLVLMATEIFDTSYEKSLDA 64
Query: 107 AAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASS 166
A A+ V H S +H+++ + D + + + K T++ + NT +L DAML +L +
Sbjct: 65 ALAIEVFHNFSLVHDDI-MDD--APLRRGKATVHEKWDLNTGILSGDAMLINAYQLFQNY 121
Query: 167 DNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETY 226
+ P + + + ++ Q V EGQ ++ +D D++ +
Sbjct: 122 EGP-------VFKELAQLFTKTAIQ-VCEGQQYDVDFEDRED--------VDIKDYLKMI 165
Query: 227 KKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
+ K L GAI+GG SE + L YG +G+
Sbjct: 166 EYKTAVLVGASLQMGAIIGGASEDCKKALYDYGCLLGI 203
>gi|375089650|ref|ZP_09735975.1| hypothetical protein HMPREF9708_00365 [Facklamia languida CCUG
37842]
gi|374566497|gb|EHR37736.1| hypothetical protein HMPREF9708_00365 [Facklamia languida CCUG
37842]
Length = 292
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 57 LRQAVV-VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHR-EQAIVAAAALHVMH 114
LRQ ++ V+ P+E+ +PM + + + + P + + E + ++ + A AL +H
Sbjct: 15 LRQYLLAVQTPLELLKPMVYSLNSGGKRLRPLMLLTILEAIDPRLIDKGLATAIALEFIH 74
Query: 115 AASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLP--FGLELLASSDNPAGN 172
S IH++LP D L + +PT + F T +L DA+L FGL +PA
Sbjct: 75 TYSLIHDDLPAMDNDDL-RRGQPTSHVKFNEATAILAGDALLTDAFGLIAQDRQLDPALK 133
Query: 173 NSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGR 232
+++ ++ A GS G+V GQ DD + ++ +T+ K G
Sbjct: 134 T-----QLIADLVYAAGSTGMVAGQL---------DDVSHQDQSVSIDHLKQTHLMKTGY 179
Query: 233 LHACGAACGAILGGGSEKEIELLRRYGFYVG 263
L G +G +EK I+LL ++G + G
Sbjct: 180 LFIFAVKAGGRIGKINEKAIDLLSQFGHHFG 210
>gi|442805670|ref|YP_007373819.1| farnesyl diphosphate synthase [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442741520|gb|AGC69209.1| farnesyl diphosphate synthase [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 298
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 92/214 (42%), Gaps = 10/214 (4%)
Query: 71 EPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTS 130
E M + V A + P L +A +++ G ++ + AAA+ ++H S IH++LP D
Sbjct: 36 ESMSYSVMAGGKRIRPVLMLAVTKMLSGDPQEVMPFAAAIEMIHTYSLIHDDLPAMDNDD 95
Query: 131 LIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGS 190
+ K T + F +L DA+L LL + AG+ ++ + RA G
Sbjct: 96 Y-RRGKLTNHKVFGEAMAILAGDALLNEAFSLLFEASANAGDKMEHWVKASCIIARAAGR 154
Query: 191 QGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEK 250
G++ GQ +++ KL + ++KK G L A+ G SE
Sbjct: 155 DGMIAGQVIDMESEGTQVSATKLKTM---------HRKKTGALITASVIVPAVFLGLSED 205
Query: 251 EIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
+I+ L Y +G+ I L IEEL K
Sbjct: 206 KIKALTEYAENIGIAFQIRDDILDVEGTIEELGK 239
>gi|406670397|ref|ZP_11077649.1| hypothetical protein HMPREF9707_01552 [Facklamia ignava CCUG 37419]
gi|405579704|gb|EKB53799.1| hypothetical protein HMPREF9707_01552 [Facklamia ignava CCUG 37419]
Length = 295
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 16/201 (7%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHRE--QAIVAAAALHVMHAASFIHENL 123
P ++EPMR+ + + P + +AA EL GGH E A AL +H S IH++L
Sbjct: 27 PNLIFEPMRYSLNNGGKRLRPVMLLAALEL-GGHDELEDGFKTAIALEYIHTYSLIHDDL 85
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE 183
P D ++ + +PT + F +L D +L L+A D+ S ++ ++
Sbjct: 86 PAMDN-DVLRRGQPTNHVKFGEAPAILAGDGLLTDAFGLIA--DDICLTASQKV-ALIAS 141
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAI 243
++++ G+ G+V GQ ++Q +E ++ K GRL I
Sbjct: 142 LSKSAGASGMVYGQMLDMQAEDYP---------VTIEQLKTIHEHKTGRLFLFALEAAGI 192
Query: 244 LGGGSEKEIELLRRYGFYVGM 264
+G S K +LL+++G + G+
Sbjct: 193 IGDFSPKLKQLLKQFGTHFGV 213
>gi|10801552|dbj|BAB16689.1| GGPP synthase [Eucommia ulmoides]
Length = 127
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 74/134 (55%), Gaps = 14/134 (10%)
Query: 134 KSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGV 193
+ KPT + F + +L D++L F EL+A+S G + RI+RV+ E+ +++GS+G+
Sbjct: 6 RGKPTNHMVFGEDVAVLAGDSLLAFAFELIATS--TTGVPADRIVRVIGELAKSIGSEGL 63
Query: 194 VEGQYNELQCSQCDDDDRKLNGITDVEMTYETY--KKKEGRLHACGAACGAILGGGSEKE 251
V GQ ++ CS+ G+TDV + + + K L GAILGG ++ E
Sbjct: 64 VAGQVIDI-CSE---------GMTDVGLEHLEFIHVHKTAALLEGSVVLGAILGGATDPE 113
Query: 252 IELLRRYGFYVGMI 265
+E LR++ +G +
Sbjct: 114 VEKLRKFARCIGFL 127
>gi|257095634|ref|YP_003169275.1| polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
gi|257048158|gb|ACV37346.1| Polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
Length = 307
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 104/224 (46%), Gaps = 14/224 (6%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P +++ MR+ + P L AA +L RE+ +AA+A+ ++H+ S +H++LP
Sbjct: 42 PGRLHQAMRYASLDGGKRVRPLLVFAAGDLTDAARERLELAASAVELIHSYSLVHDDLPC 101
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D ++ + +PT + + T LLV D++ ELLA D G ++R++
Sbjct: 102 MD-DDVLRRGRPTCHVEYDEATALLVGDSLQSLAFELLAREDFGDGARQLEMVRLLA--- 157
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
RA GS G+ GQ +L+ + LN ++E+ + K G L GA+ G
Sbjct: 158 RASGSCGMAGGQSIDLESV-----GKTLNQ-PELELMHAL---KTGALIRAAVILGALCG 208
Query: 246 GG-SEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
S E E L R+ G++ +V L T L K A K
Sbjct: 209 TPLSTTEREALDRFAKRAGLLFQVVDDILDCTASTATLGKTAGK 252
>gi|429201587|ref|ZP_19193040.1| polyprenyl synthetase [Streptomyces ipomoeae 91-03]
gi|428662879|gb|EKX62282.1| polyprenyl synthetase [Streptomyces ipomoeae 91-03]
Length = 355
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
PAL V + E+ G E + A A+ ++H S +H++L D + + T++ ++ P
Sbjct: 70 PALAVMSAEVTGAAPEVGVPGAVAVELVHNFSLLHDDLMDGDEQR---RHRDTVWKSYGP 126
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
+LV DA++ E+L + R R + TRA+ ++GQ ++
Sbjct: 127 AQAILVGDALMVLANEILLELGTA---EAARATRRVTTATRAL-----IDGQAQDISYEH 178
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
+ VE E K G L AC ++ GA+LGG ++ + L +YG+++G+
Sbjct: 179 RER--------VTVEECLEMEGNKTGALLACASSIGAVLGGADDRTADTLEKYGYHLGLA 230
Query: 266 QGIVSRRLG 274
V LG
Sbjct: 231 FQAVDDLLG 239
>gi|445494922|ref|ZP_21461966.1| farnesyl diphosphate synthase IspA [Janthinobacterium sp. HH01]
gi|444791083|gb|ELX12630.1| farnesyl diphosphate synthase IspA [Janthinobacterium sp. HH01]
Length = 296
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 112/248 (45%), Gaps = 18/248 (7%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
K+ + D+ A L A VV P ++++ MR+ + + P L AA L G
Sbjct: 10 KTVQAASENDLSAFLPAATVV--PAKLHDAMRYALLGGGKRVRPLLVYAAGALFGADAAI 67
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
AAAA+ ++HA S +H+++P D L + KPT++ A+ T LLV DA+ +
Sbjct: 68 LSRAAAAVEMIHAYSLVHDDMPCMDDDEL-RRGKPTVHVAYDEATALLVGDALQSQAFLV 126
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGIT-DVEM 221
L+ +D+ +LR+ + A GS G+ GQ +L G++ +E
Sbjct: 127 LSEADSIPAARQVAMLRL---LAHASGSAGMCGGQAIDLDSV----------GLSLTLEQ 173
Query: 222 TYETYKKKEGRLHACGAACGAILGGGSE-KEIELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
+ ++ K G L GA+ G E E++ L Y +G+ +V L T +
Sbjct: 174 LEQMHQLKTGALLRAAVVLGALAGKDLEAAELQALNDYARAIGLAFQVVDDVLDATADSA 233
Query: 281 ELKKLAFK 288
L K A K
Sbjct: 234 TLGKTAGK 241
>gi|423333207|ref|ZP_17310988.1| hypothetical protein HMPREF1075_02639 [Parabacteroides distasonis
CL03T12C09]
gi|409228087|gb|EKN20979.1| hypothetical protein HMPREF1075_02639 [Parabacteroides distasonis
CL03T12C09]
Length = 324
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 21/220 (9%)
Query: 46 WTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIV 105
+ ++ + I + + Q P +YEP+ + + + PAL + AC + E AI
Sbjct: 4 FENILQRIESEISQLQFTNPPKSLYEPIEYILSLGGKRIRPALTLMACNIYNNSIENAIK 63
Query: 106 AAAALHVMHAASFIHENL-PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA 164
A L V H + +H++L +D+ ++KPT++ + NT +L DAML +L+
Sbjct: 64 PALGLEVFHNFTLLHDDLMDEADKR----RNKPTVHKVWNANTAILSGDAMLIAAYQLIG 119
Query: 165 SSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYE 224
S+++ G + +V+ T+ + GQ +++ D E E
Sbjct: 120 STEH------GHLKQVLDLFTQTAAE--ICGGQQFDMEFESRMD--------VSEEEYIE 163
Query: 225 TYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
+ K L AC GA+LGG S+++ L +G +G+
Sbjct: 164 MIRLKTAVLLACSLKTGALLGGASQEDAGNLYAFGINIGL 203
>gi|417788058|ref|ZP_12435741.1| octaprenyl-diphosphate synthase [Lactobacillus salivarius NIAS840]
gi|334308235|gb|EGL99221.1| octaprenyl-diphosphate synthase [Lactobacillus salivarius NIAS840]
Length = 277
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 93/195 (47%), Gaps = 15/195 (7%)
Query: 71 EPMRHFVFAAPVNMAPALCVAACELVGGHREQA-IVAAAALHVMHAASFIHENLPLSDRT 129
E MR+ V A + P L + + +G ++ A +L ++H S IH++LP D
Sbjct: 16 EAMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDLPEMDND 75
Query: 130 SLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMG 189
L + KPT + F +L D +L E L+ +D ++ + ++++ ++ A G
Sbjct: 76 EL-RRGKPTNHKKFGQAIAVLAGDGLLTTSFEWLSLTDI----DNDKKIKLISQLALAAG 130
Query: 190 SQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSE 249
QG+V GQ +++ +++K N +E + K G L G IL S+
Sbjct: 131 PQGMVSGQTDDILG-----ENKKYN----LEELKHLHAGKTGALLRYACVAGGILSDASD 181
Query: 250 KEIELLRRYGFYVGM 264
++ELLR+YG G+
Sbjct: 182 NQLELLRKYGENFGL 196
>gi|196230692|ref|ZP_03129553.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428]
gi|196225033|gb|EDY19542.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428]
Length = 293
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 120/250 (48%), Gaps = 19/250 (7%)
Query: 43 KSYWTS----VHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGG 98
KSY T+ + + + L +A V +P +++ MR+ +FA + PAL +AA E G
Sbjct: 4 KSYLTARGKLIDQALDRFLPRASV--KPRTIHKAMRYSLFAGGKRLRPALTLAAAEACDG 61
Query: 99 HREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPF 158
+A+ AA A+ +H S IH++LP D L + +PT + F +L DA+L
Sbjct: 62 EVARALPAACAVECIHTYSLIHDDLPCMDDDDL-RRGRPTSHKVFGEGVAVLAGDALLTI 120
Query: 159 GLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITD 218
E+LA + + ++ ++ E+ A GSQ ++ GQ +L+ + +K++G
Sbjct: 121 AFEILAQAKE---TSRYKMPALIGELAGASGSQWLIGGQVADLE-----GEGKKISG--- 169
Query: 219 VEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEE 278
E+ Y ++ K L G + S ++ L +G +G+ ++ L T+
Sbjct: 170 AELKY-IHRCKTAALLTASIRLGGMSANASPARLKNLTEFGQSLGLAFQVIDDILDVTQT 228
Query: 279 IEELKKLAFK 288
E+L K A K
Sbjct: 229 TEKLGKTAGK 238
>gi|150010302|ref|YP_001305045.1| isoprenoid biosynthesis-like protein [Parabacteroides distasonis
ATCC 8503]
gi|255012432|ref|ZP_05284558.1| putative isoprenoid biosynthesis related protein [Bacteroides sp.
2_1_7]
gi|298374699|ref|ZP_06984657.1| polyprenyl synthetase [Bacteroides sp. 3_1_19]
gi|410104068|ref|ZP_11298985.1| hypothetical protein HMPREF0999_02757 [Parabacteroides sp. D25]
gi|149938726|gb|ABR45423.1| putative isoprenoid biosynthesis related protein [Parabacteroides
distasonis ATCC 8503]
gi|298269067|gb|EFI10722.1| polyprenyl synthetase [Bacteroides sp. 3_1_19]
gi|409235326|gb|EKN28145.1| hypothetical protein HMPREF0999_02757 [Parabacteroides sp. D25]
Length = 324
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 21/220 (9%)
Query: 46 WTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIV 105
+ ++ + I + + Q P +YEP+ + + + PAL + AC + E AI
Sbjct: 4 FENILQRIESEISQLQFTNPPKSLYEPIEYILSLGGKRIRPALTLMACNIYNNSIENAIK 63
Query: 106 AAAALHVMHAASFIHENL-PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA 164
A L V H + +H++L +D+ ++KPT++ + NT +L DAML +L+
Sbjct: 64 PALGLEVFHNFTLLHDDLMDEADKR----RNKPTVHKVWNANTAILSGDAMLIAAYQLIG 119
Query: 165 SSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYE 224
S+++ G + +V+ T+ + GQ +++ D E E
Sbjct: 120 STEH------GHLKQVLDLFTQTAAE--ICGGQQFDMEFESRMD--------VSEEEYIE 163
Query: 225 TYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
+ K L AC GA+LGG S+++ L +G +G+
Sbjct: 164 MIRLKTAVLLACSLKTGALLGGASQEDAGNLYAFGINIGL 203
>gi|451942599|ref|YP_007463236.1| geranyltranstransferase [Bartonella vinsonii subsp. berkhoffii str.
Winnie]
gi|451901986|gb|AGF76448.1| geranyltranstransferase [Bartonella vinsonii subsp. berkhoffii str.
Winnie]
Length = 300
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 104/226 (46%), Gaps = 12/226 (5%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + + MR+ V + P L + + L E ++ A AL +H S IH++
Sbjct: 32 IARPEILLKAMRYGVLNGGKRLRPFLVIQSGALFDIPPEHSLDVACALECVHCYSLIHDD 91
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D +L + KPT++ AF T +L +A+L F E++A + RI ++M
Sbjct: 92 LPAMDNDTL-RRGKPTVHKAFDEATAILAGNALLTFAFEIIAHKACALPFET-RI-KLMT 148
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+ ++ G G++ GQ +++ + + + MT + K AC A GA
Sbjct: 149 ALAQSAGLGGMIGGQMLDIEAEKTPQESINI-------MTLQRMKTAALISFACQA--GA 199
Query: 243 ILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
I+G ++ +E L +G Y+G+ + L T E L K A K
Sbjct: 200 IIGNAPQELMEKLAAFGTYLGLAFQLTDDLLDVTANSEVLGKTAGK 245
>gi|89895097|ref|YP_518584.1| hypothetical protein DSY2351 [Desulfitobacterium hafniense Y51]
gi|423073546|ref|ZP_17062285.1| putative geranyltranstransferase [Desulfitobacterium hafniense DP7]
gi|89334545|dbj|BAE84140.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|361855624|gb|EHL07587.1| putative geranyltranstransferase [Desulfitobacterium hafniense DP7]
Length = 289
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 12/164 (7%)
Query: 101 EQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGL 160
E + A AL ++H S IH++LP D + + + F +L DA+L +
Sbjct: 59 EDILPAVCALELIHTYSLIHDDLPAMDNDD-YRRGRLANHKVFGEGQAILAGDALLTYAF 117
Query: 161 ELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVE 220
EL+A +G R LR + E+ +A G +G+V GQ +L+ ++++LN + ++E
Sbjct: 118 ELIAQP--MSGVEPQRQLRAIREVAQAAGPEGMVGGQMLDLEA-----EEKQLN-LAELE 169
Query: 221 MTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
+ ++ K G + A GAIL GG+E++IE L Y +G+
Sbjct: 170 ---QVHRLKTGAILVVAARLGAILAGGTEEKIEALTSYAQAIGL 210
>gi|319404799|emb|CBI78400.1| geranyltranstransferase [Bartonella rochalimae ATCC BAA-1498]
Length = 300
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 103/234 (44%), Gaps = 12/234 (5%)
Query: 55 AHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMH 114
+H Q + P + MRH V + P L + + L E ++ AL +H
Sbjct: 24 SHKAQNDEITRPEILINAMRHGVLNGGKRLRPFLVIQSAALFDISPEDSLDIGVALECIH 83
Query: 115 AASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNS 174
S IH++LP D +L + +PT++ AF T +L +A+L F E++A +S
Sbjct: 84 CYSLIHDDLPALDNDTL-RRGQPTVHIAFDEGTAILAGNALLTFAFEIIAH--KACSFSS 140
Query: 175 GRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLH 234
+ ++ +T+A G G++ GQ +L+ + ++ +T + K
Sbjct: 141 KTRIELITALTQAAGLGGMIGGQMLDLEAEKKPQNE-------SATITLQQMKTAALIRF 193
Query: 235 ACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
AC A GAI+G S+ L +G ++G+ + L T + L K A K
Sbjct: 194 ACQA--GAIMGRASKTLTHKLASFGTHIGLAFQLTDDLLDLTSHTKILGKTAGK 245
>gi|164688608|ref|ZP_02212636.1| hypothetical protein CLOBAR_02253 [Clostridium bartlettii DSM
16795]
gi|164603021|gb|EDQ96486.1| polyprenyl synthetase [Clostridium bartlettii DSM 16795]
Length = 295
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 110/242 (45%), Gaps = 19/242 (7%)
Query: 34 MAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVE--VYEPMRHFVFAAPVNMAPALCVA 91
MA K KS + ED+ L+Q + +E + ++E M + + + + P L +
Sbjct: 1 MAFKEDLKTKSAYI---EDL---LKQYMPKEEGYQKTIFEAMNYSLSSGGKRLRPILTLE 54
Query: 92 ACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLV 151
+ +++GG ++ I A+ ++H S IH++LP D + KPT + F L
Sbjct: 55 SAKIIGGDVKEVIPFCVAIEMIHTYSLIHDDLPAMDNDDF-RRGKPTNHKVFGDGMATLA 113
Query: 152 ADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDR 211
DA+L + E++ ++ N+ L+ + E+ R G G++ GQ +++ +
Sbjct: 114 GDALLNYAFEIML-KESLGKENADIRLKAIYEIARGAGIYGMIGGQVVDIESENKSIEKE 172
Query: 212 KLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSR 271
KL+ I K + C A GAI+G E +++ + +Y +G+ IV
Sbjct: 173 KLDFI--------HMNKTAAMIIGCMRA-GAIMGNACEDDLQNITKYAKNIGLAFQIVDD 223
Query: 272 RL 273
L
Sbjct: 224 IL 225
>gi|384462224|ref|YP_005674819.1| geranyltranstransferase [Clostridium botulinum F str. 230613]
gi|295319241|gb|ADF99618.1| geranyltranstransferase [Clostridium botulinum F str. 230613]
Length = 290
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 13/197 (6%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
++YE M + + A + P L + L ++A+ AAA+ ++H S IH++LP D
Sbjct: 28 KIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMD 87
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
L + KPT + F +L DA+L + ++ + N + L+ + +A
Sbjct: 88 NDDL-RRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEY---SLKNGEKALKACYTIAKA 143
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G G++ GQ ++ +D+ ++ ++ Y +KK G L GAILG
Sbjct: 144 AGVDGMIGGQVVDILS-----EDKSIS----LDELYYMQQKKAGALIKASILAGAILGSA 194
Query: 248 SEKEIELLRRYGFYVGM 264
+ +IELL YG +G+
Sbjct: 195 TYTDIELLGEYGDNLGL 211
>gi|315229911|ref|YP_004070347.1| dimethylallyltransferase [Thermococcus barophilus MP]
gi|315182939|gb|ADT83124.1| dimethylallyltransferase [Thermococcus barophilus MP]
Length = 342
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 29/201 (14%)
Query: 70 YEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRT 129
YE RH+ A + P + + A E VGG +A+ AAA+ ++H + IH+++ D T
Sbjct: 35 YEATRHYPLAGGKRVRPFVVLTAAEAVGGDWRKALYPAAAIEILHTYTLIHDDIMDMDET 94
Query: 130 SLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMG 189
+ + T++ + N +L D M + + A++ P +VE+ RA+
Sbjct: 95 R---RGRATVHKVWGINMAILAGDLM--YSVVFDAATKAPVSAEK------IVEIVRAIA 143
Query: 190 SQG--VVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKK----KEGRLHACGAACGAI 243
G + EGQ +L+ D +T E Y K K L A G I
Sbjct: 144 RAGIEICEGQALDLEFETRD------------TVTIEEYLKMIDGKTAALFDASAKIGGI 191
Query: 244 LGGGSEKEIELLRRYGFYVGM 264
+G +++ I+ L +YG VGM
Sbjct: 192 IGTDNQEYIQALSKYGRNVGM 212
>gi|345850203|ref|ZP_08803204.1| polyprenyl synthatase [Streptomyces zinciresistens K42]
gi|345638377|gb|EGX59883.1| polyprenyl synthatase [Streptomyces zinciresistens K42]
Length = 342
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 85/189 (44%), Gaps = 19/189 (10%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
PAL V + E+ G E I A A+ ++H S +H++L D + + T++ P
Sbjct: 57 PALAVLSAEVTGAGPETGIPGAVAVELVHNFSLLHDDLMDGDEQR---RHRDTVWKVHGP 113
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
+LV DA+ ELL +GR R + TRA+ ++GQ ++
Sbjct: 114 AQAILVGDALFALANELLLELGTV---EAGRATRRLTTATRAL-----IDGQAQDISYEH 165
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
D VE E K G L AC ++ GA+LGG ++ + L RYG+++G+
Sbjct: 166 RDR--------VSVEECLEMEGNKTGALLACASSIGAVLGGADDRTADALERYGYHLGLA 217
Query: 266 QGIVSRRLG 274
V LG
Sbjct: 218 FQAVDDLLG 226
>gi|116052080|ref|YP_789076.1| geranyltranstransferase [Pseudomonas aeruginosa UCBPP-PA14]
gi|254242726|ref|ZP_04936048.1| geranyltranstransferase [Pseudomonas aeruginosa 2192]
gi|313109486|ref|ZP_07795442.1| geranyltranstransferase [Pseudomonas aeruginosa 39016]
gi|386068145|ref|YP_005983449.1| geranyltranstransferase [Pseudomonas aeruginosa NCGM2.S1]
gi|416859067|ref|ZP_11913665.1| geranyltranstransferase [Pseudomonas aeruginosa 138244]
gi|421172688|ref|ZP_15630453.1| geranyltranstransferase [Pseudomonas aeruginosa CI27]
gi|421178784|ref|ZP_15636387.1| geranyltranstransferase [Pseudomonas aeruginosa E2]
gi|451982672|ref|ZP_21930976.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Pseudomonas
aeruginosa 18A]
gi|115587301|gb|ABJ13316.1| geranyltranstransferase [Pseudomonas aeruginosa UCBPP-PA14]
gi|126196104|gb|EAZ60167.1| geranyltranstransferase [Pseudomonas aeruginosa 2192]
gi|310881944|gb|EFQ40538.1| geranyltranstransferase [Pseudomonas aeruginosa 39016]
gi|334838829|gb|EGM17534.1| geranyltranstransferase [Pseudomonas aeruginosa 138244]
gi|348036704|dbj|BAK92064.1| geranyltranstransferase [Pseudomonas aeruginosa NCGM2.S1]
gi|404537378|gb|EKA46981.1| geranyltranstransferase [Pseudomonas aeruginosa CI27]
gi|404547882|gb|EKA56862.1| geranyltranstransferase [Pseudomonas aeruginosa E2]
gi|451759674|emb|CCQ83499.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Pseudomonas
aeruginosa 18A]
gi|453043257|gb|EME90989.1| geranyltranstransferase [Pseudomonas aeruginosa PA21_ST175]
Length = 295
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 4/139 (2%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
+E +YE MR+ V + P L AACE +GG ++A AA A+ ++HA S +H++L
Sbjct: 26 EELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDL 85
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASS-DNPAGNNSGRILRVMV 182
P D L + +PT + AF T +L AD + E+LA + NP L ++
Sbjct: 86 PAMDDDDL-RRGQPTTHRAFDEATAILAADGLQALAFEVLADTRRNP--QEHAVCLEMLT 142
Query: 183 EMTRAMGSQGVVEGQYNEL 201
+ RA GS G+V GQ +L
Sbjct: 143 RLARAAGSAGMVGGQAIDL 161
>gi|387818091|ref|YP_005678436.1| octaprenyl-diphosphate synthase [Clostridium botulinum H04402 065]
gi|322806133|emb|CBZ03701.1| octaprenyl-diphosphate synthase [Clostridium botulinum H04402 065]
Length = 284
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 13/197 (6%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
++YE M + + A + P L + L ++A+ AAA+ ++H S IH++LP D
Sbjct: 22 KIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMD 81
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
L + KPT + F +L DA+L + ++ + N + ++ + +A
Sbjct: 82 NDDL-RRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEY---SLKNGEKAVKACYTIAKA 137
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G G++ GQ ++ +D+ + ++ Y +KKK G L GAILG
Sbjct: 138 AGVDGMIGGQVVDILS-----EDKSI----PLDELYYMHKKKTGALIKSSILAGAILGSA 188
Query: 248 SEKEIELLRRYGFYVGM 264
+ +IELL YG +G+
Sbjct: 189 TYTDIELLGEYGDNLGL 205
>gi|206602067|gb|EDZ38549.1| Geranyltranstransferase [Leptospirillum sp. Group II '5-way CG']
Length = 303
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 15/235 (6%)
Query: 34 MAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVY----EPMRHFVFAAPVNMAPALC 89
MA S P ++Y + L +++ VKE Y E MR+ + A + P L
Sbjct: 1 MADSQPVAIEAYLNRCKYAVEQFL-ESLFVKELGTDYGTLAESMRYSLLAGGKRIRPVLA 59
Query: 90 VAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTEL 149
+AA E + I A L ++H S IH++LP D SL + KPT + + T +
Sbjct: 60 MAAMEALDRDPIPCIPLLAPLELIHTYSLIHDDLPSMDDDSL-RRGKPTNHVIYGDATAI 118
Query: 150 LVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDD 209
L DA+L LL+ D + L+++ E++ G G+V GQ ++ +
Sbjct: 119 LAGDALLTHAFTLLSDPDYDKLVSFEIRLKIIHELSVGAGINGMVGGQQMDIAS-----E 173
Query: 210 DRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
+ LN ++ +E ++ K G L GA+LG S + E L RYG VG+
Sbjct: 174 GKALN-LSSLEFLHQ---HKTGALIRASLRIGALLGKASSSDFERLDRYGQAVGI 224
>gi|403531003|ref|YP_006665532.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
quintana RM-11]
gi|403233074|gb|AFR26817.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
quintana RM-11]
Length = 309
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 15/228 (6%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + + MR+ V + P L + + L E + A+AL +H S IH++
Sbjct: 40 ISRPEALIKAMRYGVLNGGKRLRPFLVIQSGALFDIPAEYCLDVASALECVHCYSLIHDD 99
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA--SSDNPAGNNSGRILRV 180
LP D +L + +PT++ AF T +L +A+L F E++A +S P +++
Sbjct: 100 LPAMDNDTL-RRGQPTVHIAFDEATAILAGNALLTFAFEIIAHKASTLPFETR----IKL 154
Query: 181 MVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAAC 240
+ + ++ G G++ GQ +L+ + D T +T + K AC A
Sbjct: 155 ITALAQSAGLGGMIGGQMLDLEAEKKPQDS------TISILTLQHMKTAALISFACQA-- 206
Query: 241 GAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GAI+G S++ E L +G Y+G+ + L T E L K A K
Sbjct: 207 GAIIGNASKELTEKLAAFGTYLGLAFQLTDDLLDITASTEILGKTAGK 254
>gi|355639277|ref|ZP_09051079.1| hypothetical protein HMPREF1030_00165 [Pseudomonas sp. 2_1_26]
gi|421168156|ref|ZP_15626265.1| geranyltranstransferase [Pseudomonas aeruginosa ATCC 700888]
gi|354832132|gb|EHF16133.1| hypothetical protein HMPREF1030_00165 [Pseudomonas sp. 2_1_26]
gi|404531451|gb|EKA41405.1| geranyltranstransferase [Pseudomonas aeruginosa ATCC 700888]
Length = 295
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 4/139 (2%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
+E +YE MR+ V + P L AACE +GG ++A AA A+ ++HA S +H++L
Sbjct: 26 EELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDL 85
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASS-DNPAGNNSGRILRVMV 182
P D L + +PT + AF T +L AD + E+LA + NP L ++
Sbjct: 86 PAMDDDDL-RRGQPTTHRAFDEATAILAADGLQALAFEVLADTRRNP--QEHAVCLEMLT 142
Query: 183 EMTRAMGSQGVVEGQYNEL 201
+ RA GS G+V GQ +L
Sbjct: 143 RLARAAGSAGMVGGQAIDL 161
>gi|420156901|ref|ZP_14663741.1| polyprenyl synthetase [Clostridium sp. MSTE9]
gi|394756911|gb|EJF39970.1| polyprenyl synthetase [Clostridium sp. MSTE9]
Length = 295
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 112/262 (42%), Gaps = 25/262 (9%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
E++ M + + + + P L + C L GG A+ A A+ ++H S IH++LP D
Sbjct: 30 ELFSSMEYSLLSGGKRIRPILTLEFCRLCGGSLTAALPFACAIEMIHTYSLIHDDLPCMD 89
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
L + +PT + + T LL DA+L E + S + + + RA
Sbjct: 90 DDEL-RRGRPTNHRVYGEATALLAGDALLTLAFETMLSPQTIRTAGAVKTATAAGVLARA 148
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G+ G+V GQ +L + +K+ ++ + + E +K G L A G ++GG
Sbjct: 149 AGATGMVGGQIIDLAS-----EGKKIP-LSTLRVMDE---RKTGALILAAAEMGCVVGGA 199
Query: 248 SEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVNSFNDENAEV----- 302
++I R Y +G+ IV L T + L K V+ ND++ V
Sbjct: 200 GNEKIRAAREYAKALGLAFQIVDDILDVTGD----STLLGKNVGVDDLNDKSTYVSLMGL 255
Query: 303 ------IFSLVDDNITHVLGFN 318
+ L D+ +T + F+
Sbjct: 256 DGAKKAVRELTDEAVTALAKFD 277
>gi|257875398|ref|ZP_05655051.1| geranyltranstransferase [Enterococcus casseliflavus EC20]
gi|257809564|gb|EEV38384.1| geranyltranstransferase [Enterococcus casseliflavus EC20]
Length = 295
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 15/218 (6%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVA-AAALHVMHAASFIHENLPLSD 127
++E M++ + A + P L VA A+ AAAL ++H S IH++LP D
Sbjct: 29 LFESMQYSIQAGGKRIRPLLLVATVAAFHKPINTAVYQCAAALEMVHTYSLIHDDLPAMD 88
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
L + KPT + F +L D +L +L+A ++ A + ++ ++++A
Sbjct: 89 NDDL-RRGKPTNHKVFGEALAILAGDGLLTAAFQLVAMAEIEANQK----VLLLQQLSKA 143
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G+QG+V GQ ++Q N +E +++K G L G +L
Sbjct: 144 AGTQGMVAGQAADIQGE---------NQALRLEELMSIHERKTGELIRFAVIAGGVLADQ 194
Query: 248 SEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKL 285
+E+ + L R+ ++G+ I L T EEL K+
Sbjct: 195 TEEVLHELDRFAQHIGLAFQIRDDLLDATSTTEELGKV 232
>gi|423713466|ref|ZP_17687726.1| hypothetical protein ME1_00472 [Bartonella vinsonii subsp.
arupensis OK-94-513]
gi|395423507|gb|EJF89702.1| hypothetical protein ME1_00472 [Bartonella vinsonii subsp.
arupensis OK-94-513]
Length = 300
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 12/226 (5%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + + MR+ V + P L + + L E ++ A AL +H S IH++
Sbjct: 32 IARPEILLKAMRYGVLNGGKRLRPFLVIQSGALFDIPPEHSLDVACALECVHCYSLIHDD 91
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D +L + +PT++ AF T +L +A+L F E++A A + RI +++
Sbjct: 92 LPAMDNDTL-RRGQPTVHKAFDEATAILAGNALLTFAFEIIAHK-AFALSFETRI-KLIT 148
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+ ++ G G++ GQ +++ + + + MT + K AC A GA
Sbjct: 149 ALAQSAGLGGMIGGQMLDIEAEKTPQESTNI-------MTLQRMKTAALISFACQA--GA 199
Query: 243 ILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
I+ S++ E L +G Y+G+ + L T E+L K A K
Sbjct: 200 IISNASQELTEKLAAFGTYLGLAFQLTDDLLDVTASSEDLGKTAGK 245
>gi|226949181|ref|YP_002804272.1| geranyltranstransferase [Clostridium botulinum A2 str. Kyoto]
gi|226842010|gb|ACO84676.1| geranyltranstransferase [Clostridium botulinum A2 str. Kyoto]
Length = 290
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 13/197 (6%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
++YE M + + A + P L + L ++A+ AAA+ ++H S IH++LP D
Sbjct: 28 KIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMD 87
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
L + KPT + F +L DA+L + ++ + N + ++ + +A
Sbjct: 88 NDDL-RRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEY---SLKNGEKAVKACYTIAKA 143
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G G++ GQ ++ +D+ + ++ Y +KKK G L GAILG
Sbjct: 144 AGVDGMIGGQVVDILS-----EDKSI----PLDELYYMHKKKTGALIKASILAGAILGSA 194
Query: 248 SEKEIELLRRYGFYVGM 264
+ +IELL YG +G+
Sbjct: 195 TYTDIELLGEYGDNLGL 211
>gi|146337687|ref|YP_001202735.1| geranyltranstransferase [Bradyrhizobium sp. ORS 278]
gi|146190493|emb|CAL74492.1| Putative Geranyltranstransferase (Farnesyl-diphosphate synthase)
(FPP synthase) [Bradyrhizobium sp. ORS 278]
Length = 306
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + E MR+ + P L V + + G R A++A AAL +H S IH++
Sbjct: 36 IARPKRLIESMRYSSLGGGKRLRPFLVVESAAVFGVPRRGALMAGAALECIHCYSLIHDD 95
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD-NPAGNNSGRILRVM 181
LP D + L + +PT++ + T +L DA+L +++ + +P ++G L +
Sbjct: 96 LPAMDNSDL-RRGRPTLHKVYDDATAILAGDALLTIAFDIITRDEIHP---DAGVRLALT 151
Query: 182 VEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACG 241
+ R G G+ GQ +L + DR + V+ + K G L G G
Sbjct: 152 RALARCAGVGGMAGGQILDL-AGEGRFGDRDPVDVARVQ------QMKTGALLRFGCIAG 204
Query: 242 AILGGGSEKEIELLRRYGFYVG 263
A+LG S E + L YG +G
Sbjct: 205 ALLGQASAAEYKALDDYGRALG 226
>gi|357417905|ref|YP_004930925.1| geranylgeranyl pyrophosphate synthase [Pseudoxanthomonas spadix
BD-a59]
gi|355335483|gb|AER56884.1| geranylgeranyl pyrophosphate synthase [Pseudoxanthomonas spadix
BD-a59]
Length = 292
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 18/204 (8%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
V+ P ++ MRH M P L AA + G A A+ ++HA S +H++
Sbjct: 26 VRAPQRLHAAMRHAALGGGKRMRPLLVYAAGTMTGADEGVLDAPATAVELIHAYSLVHDD 85
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRV-- 180
LP D +L + +PT++ AF T +L DA+ E+LA SD +G +LRV
Sbjct: 86 LPAMDDDAL-RRGQPTVHIAFDEATAVLAGDALQTLAFEVLAGSD------AGAVLRVAW 138
Query: 181 MVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAAC 240
+ + +A G G+ GQ ++ + + ++ + K G L
Sbjct: 139 LQTLAQASGVAGMCGGQALDIDAT---------GQLQSLQALQHMHALKTGALIRASVRL 189
Query: 241 GAILGGGSEKEIELLRRYGFYVGM 264
GA+ GG E ++ L + +G+
Sbjct: 190 GALAGGVEEATLQRLDAFAQALGL 213
>gi|403744977|ref|ZP_10954005.1| Polyprenyl synthetase [Alicyclobacillus hesperidum URH17-3-68]
gi|403121632|gb|EJY55909.1| Polyprenyl synthetase [Alicyclobacillus hesperidum URH17-3-68]
Length = 291
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 100/222 (45%), Gaps = 16/222 (7%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
+YE M + + A + PAL +A + G R++ + AAAAL ++H S IH++LP D
Sbjct: 29 LYEAMNYSLMADGKRLRPALLMATAQTFGVERQRVLPAAAALEMIHCYSLIHDDLPCMDD 88
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLAS--SDNPAGNNSGRILRVMVEMTR 186
SL + +PT + F LL D +L LLA + PA R LR++ +
Sbjct: 89 DSL-RRGQPTNHVVFGEAIALLAGDGLLTEAFALLARPIPEVPA----ERQLRMIQILAS 143
Query: 187 AMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGG 246
G+ G+V GQ +++ + +TDV+ + K RL G++
Sbjct: 144 RAGADGMVGGQAVDVERTGGQ------GTLTDVQF---IHLHKTARLIQAAVEIGSLFPD 194
Query: 247 GSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
EK E L YG +G+ +V L EL K A K
Sbjct: 195 LDEKAQEALSTYGEALGLAFQMVDDVLDVVGSTSELGKTAGK 236
>gi|313884672|ref|ZP_07818428.1| geranyltranstransferase [Eremococcus coleocola ACS-139-V-Col8]
gi|312620040|gb|EFR31473.1| geranyltranstransferase [Eremococcus coleocola ACS-139-V-Col8]
Length = 300
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 97/208 (46%), Gaps = 14/208 (6%)
Query: 58 RQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELV-GGHREQAIVAAAALHVMHAA 116
+ + ++ P+E+ +PM + + + P + + ++ + + + A AL +H
Sbjct: 19 KHCLSIEAPLEMVKPMLYSLKNGGKRLRPLMVLLVIDIFEQANLKDGLSTAFALEYIHTY 78
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGR 176
S IH++LP D L + +PT + F T +L DA+L L+A A +
Sbjct: 79 SLIHDDLPAMDNDDL-RRGQPTNHVQFDEATAILAGDALLTDAFALIAQE---AKLKPRQ 134
Query: 177 ILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHAC 236
L+++ ++R+ GS G+V GQ +++ N +E ++ K GRL +
Sbjct: 135 RLKLIELLSRSAGSTGMVAGQLFDIRAE---------NQTLTIEALKNIHRLKTGRLFSY 185
Query: 237 GAACGAILGGGSEKEIELLRRYGFYVGM 264
GAI+ S+KE++L+ + G+
Sbjct: 186 ACQAGAIISDASDKELKLIDEFAQAFGL 213
>gi|227890599|ref|ZP_04008404.1| geranyltranstransferase [Lactobacillus salivarius ATCC 11741]
gi|227867537|gb|EEJ74958.1| geranyltranstransferase [Lactobacillus salivarius ATCC 11741]
Length = 305
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 15/195 (7%)
Query: 71 EPMRHFVFAAPVNMAPALCVAACELVGGHREQA-IVAAAALHVMHAASFIHENLPLSDRT 129
E MR+ V A + P L + + +G ++ A +L ++H S IH++LP D
Sbjct: 44 ESMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDLPEMDND 103
Query: 130 SLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMG 189
L + KPT + F +L D +L E L+ +D ++ + ++++ ++ A G
Sbjct: 104 EL-RRGKPTNHKKFGQAIAVLAGDGLLTTSFEWLSLTDI----DNDKKIKLISQLALAAG 158
Query: 190 SQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSE 249
QG+V GQ +++ + +K N +E + K G L G IL S+
Sbjct: 159 PQGMVSGQTDDILG-----ESKKYN----LEELKHLHAGKTGALLRYACVAGGILSDASD 209
Query: 250 KEIELLRRYGFYVGM 264
++ELLR+YG G+
Sbjct: 210 NQLELLRKYGENFGL 224
>gi|385840231|ref|YP_005863555.1| geranyltranstransferase [Lactobacillus salivarius CECT 5713]
gi|300214352|gb|ADJ78768.1| Geranyltranstransferase [Lactobacillus salivarius CECT 5713]
Length = 305
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 15/195 (7%)
Query: 71 EPMRHFVFAAPVNMAPALCVAACELVGGHREQA-IVAAAALHVMHAASFIHENLPLSDRT 129
E MR+ V A + P L + + +G ++ A +L ++H S IH++LP D
Sbjct: 44 ESMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDLPEMDND 103
Query: 130 SLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMG 189
L + KPT + F +L D +L E L+ +D ++ + ++++ ++ A G
Sbjct: 104 EL-RRGKPTNHKKFGQAIAVLAGDGLLTTSFEWLSLTDI----DNDKKIKLISQLALAAG 158
Query: 190 SQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSE 249
QG+V GQ +++ + +K N +E + K G L G IL S+
Sbjct: 159 PQGMVSGQTDDILG-----ESKKYN----LEELKHLHAGKTGALLRYACVAGGILSDASD 209
Query: 250 KEIELLRRYGFYVGM 264
++ELLR+YG G+
Sbjct: 210 NQLELLRKYGENFGL 224
>gi|90961512|ref|YP_535428.1| geranyltranstransferase [Lactobacillus salivarius UCC118]
gi|417810499|ref|ZP_12457178.1| geranyltranstransferase [Lactobacillus salivarius GJ-24]
gi|90820706|gb|ABD99345.1| Geranyltranstransferase [Lactobacillus salivarius UCC118]
gi|335349295|gb|EGM50795.1| geranyltranstransferase [Lactobacillus salivarius GJ-24]
Length = 297
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 15/195 (7%)
Query: 71 EPMRHFVFAAPVNMAPALCVAACELVGGHREQA-IVAAAALHVMHAASFIHENLPLSDRT 129
E MR+ V A + P L + + +G ++ A +L ++H S IH++LP D
Sbjct: 36 ESMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDLPEMDND 95
Query: 130 SLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMG 189
L + KPT + F +L D +L E L+ +D ++ + ++++ ++ A G
Sbjct: 96 EL-RRGKPTNHKKFGQAIAVLAGDGLLTTSFEWLSLTDI----DNDKKIKLISQLALAAG 150
Query: 190 SQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSE 249
QG+V GQ +++ + +K N +E + K G L G IL S+
Sbjct: 151 PQGMVSGQTDDILG-----ESKKYN----LEELKHLHAGKTGALLRYACVAGGILSDASD 201
Query: 250 KEIELLRRYGFYVGM 264
++ELLR+YG G+
Sbjct: 202 NQLELLRKYGENFGL 216
>gi|58584994|ref|YP_198567.1| geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont
strain TRS of Brugia malayi]
gi|58419310|gb|AAW71325.1| Geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont
strain TRS of Brugia malayi]
Length = 305
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 30/218 (13%)
Query: 73 MRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLI 132
+R+ + A ++ P L VA+ ++ E+ I A A+ +H S IH++LP D +
Sbjct: 30 VRYVLLAPAKHIRPFLVVASSQVFNVEIERVISIAMAVECIHTYSLIHDDLPCMDNSD-T 88
Query: 133 PKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQG 192
+ + + + F T +L DA+L E+L SS N N I++ +++A+G++G
Sbjct: 89 RRGQLSCHKRFDKATAVLAGDALLTLAFEIL-SSLNEGSNKRCEIIKA---LSQAIGAKG 144
Query: 193 VVEGQYNELQCS----------------------QCDDDDRKLNG---ITDVEMTYETYK 227
+V GQ +++ + Q + +R L IT E +
Sbjct: 145 MVGGQILDIKTALHVIQHHDYLDPESSVINEHTRQLCNKNRTLGSCAKITPDSKIKEIHL 204
Query: 228 KKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
K +L A GAI+G ++K+ L YG +G+I
Sbjct: 205 MKTAKLFAASCEIGAIIGSATDKQRRALYNYGVNLGLI 242
>gi|168180471|ref|ZP_02615135.1| geranyltranstransferase [Clostridium botulinum NCTC 2916]
gi|182668864|gb|EDT80842.1| geranyltranstransferase [Clostridium botulinum NCTC 2916]
Length = 290
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 13/197 (6%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
++YE M + + A + P L + L ++A+ AAA+ ++H S IH++LP D
Sbjct: 28 KIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMD 87
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
L + KPT + F +L DA+L + ++ + N + ++ + +A
Sbjct: 88 NDDL-RRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEY---SLKNGEKAVKACYTIAKA 143
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G G++ GQ ++ +D+ + ++ Y +KKK G L GAILG
Sbjct: 144 AGVDGMIGGQVVDILS-----EDKSI----PLDELYYMHKKKTGALIKASILAGAILGSA 194
Query: 248 SEKEIELLRRYGFYVGM 264
+ +IELL YG +G+
Sbjct: 195 TYTDIELLGEYGDNLGL 211
>gi|426402189|ref|YP_007021160.1| geranyltranstransferase [Bdellovibrio bacteriovorus str. Tiberius]
gi|425858857|gb|AFX99892.1| geranyltranstransferase [Bdellovibrio bacteriovorus str. Tiberius]
Length = 289
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 89/179 (49%), Gaps = 13/179 (7%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
P L + EL G +E+ + AAA+ ++H S IH++LP D + + KPT + F
Sbjct: 57 PVLSLLVGELFGAGKERILPFAAAVEMIHTYSLIHDDLPCMDNDDM-RRGKPTNHKVFGE 115
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
+ LL DA+L L+A + G+NS + + ++ A G +G+V GQ +L+
Sbjct: 116 DFALLAGDALLTEAFMLIAEN---YGDNSFLVGHLTRLLSSAAGIRGMVGGQAIDLRAG- 171
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
DR+++ +E ++ K G L A++ G EIE L+++G +G+
Sbjct: 172 ----DRQMS----LEELTHLHRLKTGALIRVAVEGAAVIAGAKPTEIESLKKFGEGLGL 222
>gi|326794293|ref|YP_004312113.1| Geranyltranstransferase [Marinomonas mediterranea MMB-1]
gi|326545057|gb|ADZ90277.1| Geranyltranstransferase [Marinomonas mediterranea MMB-1]
Length = 301
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 106/231 (45%), Gaps = 16/231 (6%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
++E MR+ +F + P L A EL +AAA+ +HA S IH++LP D
Sbjct: 31 LHEAMRYSLFNGGKRVRPMLVYATAELFSESNRLTDASAAAIESIHAYSLIHDDLPAMDD 90
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNS-----GRILRVMVE 183
L + KPT + F T +L DA+ F ELL++S N ++ R LR++
Sbjct: 91 DDL-RRGKPTCHIQFDEATAILTGDALQTFAFELLSASYNEIDTDNLADCKTRQLRLIRS 149
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA- 242
++RA G G+V GQ +L ++ DR + +E + ++ K G L GA
Sbjct: 150 LSRASGRFGMVTGQMIDL-----NNVDRSIT----LETLEKMHQHKTGALIRASVLMGAQ 200
Query: 243 ILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVN 293
+G +K + L +Y +G+ + + T + + L K F E N
Sbjct: 201 SVGIEDQKILSQLDKYASAIGLAFQVQDDIIDITSDTQTLGKNQFSDSEAN 251
>gi|83648505|ref|YP_436940.1| geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC
2396]
gi|83636548|gb|ABC32515.1| Geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC
2396]
Length = 299
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 98/199 (49%), Gaps = 22/199 (11%)
Query: 71 EPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTS 130
E M + V + P L +A E +GG +QA+ A A+ ++HA S +H++LP D S
Sbjct: 39 EAMGYCVLNGGKRVRPLLLLATTEALGGDLQQALPACCAVELIHAYSLVHDDLPAMDDDS 98
Query: 131 LIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGS 190
L + KPT + A+ T +LV D + L S +G ++ +L+++ E+ RA G
Sbjct: 99 L-RRGKPTCHIAYDEATAILVGDGLQTLAFSALTES---SGASAESVLQMVRELARASGH 154
Query: 191 QGVVEGQ----YNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGG 246
QG+V GQ Y+E + ++ +R + +K G L GA+ G
Sbjct: 155 QGMVGGQAIDIYSEGHTLKLEELER-------------MHLEKTGALIEASIVLGALASG 201
Query: 247 GSEKE-IELLRRYGFYVGM 264
++ E IE LRR+ +G+
Sbjct: 202 RADAECIEGLRRFARAIGL 220
>gi|332796336|ref|YP_004457836.1| farnesyltranstransferase [Acidianus hospitalis W1]
gi|332694071|gb|AEE93538.1| farnesyltranstransferase [Acidianus hospitalis W1]
Length = 326
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 120/237 (50%), Gaps = 20/237 (8%)
Query: 48 SVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAA 107
+V+E+I +++ EP E+Y+ + + A + P + VA+ +L G R++A AA
Sbjct: 13 NVNEEIEKYIKG-----EPKELYDASIYLLKAGGKRLRPLITVASSDLFSGDRKRAYKAA 67
Query: 108 AALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD 167
AA+ ++H + IH+++ D + + PT++ + +L D + E+L S+
Sbjct: 68 AAVEILHNFTLIHDDIMDEDT---LRRGMPTVHVKWGVPMAILAGDLLHAKAFEVL--SE 122
Query: 168 NPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYK 227
G +S R + E ++++ + EGQ +++ D +T+ E E K
Sbjct: 123 ALEGLDSKRFYMGLSEFSKSVII--IAEGQAMDMEFENRQD-------VTEEEYL-EMIK 172
Query: 228 KKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
KK +L +C A G ++ G +K++ELL+ +G +G+ I+ LG T + +EL K
Sbjct: 173 KKTAQLFSCSAFLGGLVSGAEDKDLELLKEFGLNLGIAFQIIDDILGLTADEKELGK 229
>gi|443243711|ref|YP_007376936.1| polyprenyl synthetase [Nonlabens dokdonensis DSW-6]
gi|442801110|gb|AGC76915.1| polyprenyl synthetase [Nonlabens dokdonensis DSW-6]
Length = 327
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 88/210 (41%), Gaps = 21/210 (10%)
Query: 56 HLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHA 115
L+ V EP +Y+P+ + + + P L + + E+ G + A+ AA A+ V H
Sbjct: 14 ELKSKVTATEPAGLYDPVHYILDLGGKRLRPLLTLMSAEMYGATAKDAMNAAIAVEVFHN 73
Query: 116 ASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSG 175
+ +H+++ + + + K T++ + NT +L DAML L D
Sbjct: 74 FTLLHDDIM---DAADLRRGKETVHKKWDVNTGILTGDAMLIMAYRLFEDYDKDKFYQLN 130
Query: 176 RIL-RVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLH 234
++ R +E V EGQ +++ DD V K K L
Sbjct: 131 KVFSRTALE---------VCEGQQHDVDFETRDD--------VSVPEYLNMIKLKTSVLV 173
Query: 235 ACGAACGAILGGGSEKEIELLRRYGFYVGM 264
C GAI+ G EKE EL+ YG +G+
Sbjct: 174 GCALQMGAIIAGVDEKEQELIYDYGINLGL 203
>gi|148379844|ref|YP_001254385.1| geranyltranstransferase [Clostridium botulinum A str. ATCC 3502]
gi|148289328|emb|CAL83424.1| geranyltranstransferase [Clostridium botulinum A str. ATCC 3502]
Length = 294
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 13/196 (6%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
+YE M + + A + P L + L ++A+ AAA+ ++H S IH++LP D
Sbjct: 33 IYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDN 92
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
L + KPT + F +L DA+L + ++ + N + L + +A
Sbjct: 93 DDL-RRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEY---SLKNGEKALEACYAIAKAA 148
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
G G++ GQ ++ +D+ + ++ Y +KKK G L GAILG +
Sbjct: 149 GVDGMIGGQVVDILS-----EDKSI----PLDELYYMHKKKTGALIKASILAGAILGSDT 199
Query: 249 EKEIELLRRYGFYVGM 264
+IELL YG +G+
Sbjct: 200 YTDIELLGEYGDNLGL 215
>gi|375082679|ref|ZP_09729728.1| Bifunctional short chain isoprenyl diphosphate synthase
[Thermococcus litoralis DSM 5473]
gi|374742639|gb|EHR79028.1| Bifunctional short chain isoprenyl diphosphate synthase
[Thermococcus litoralis DSM 5473]
Length = 341
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 17/201 (8%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
KEP +Y+ RH+ A + P + + + E VGG+ E+A+ AAAA+ ++H S +H+++
Sbjct: 28 KEPKVLYDAARHYPLAGGKRVRPFIVLTSTEAVGGNPEKAVYAAAAVELLHNYSLVHDDI 87
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE 183
D + +PT++ + N +L D + E +A ++ VE
Sbjct: 88 MDMDEKR---RGRPTVHKIWGINMAILAGDLLFSKVFEAVA--------------KIPVE 130
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAI 243
+ + V+ NEL Q D + + +E + K G L A G I
Sbjct: 131 AEKVVRVLDVIAKTSNELCEGQAMDLEFENKETVTIEEYMKMISGKTGALIDASATIGGI 190
Query: 244 LGGGSEKEIELLRRYGFYVGM 264
+G +E I+ L +YG +G+
Sbjct: 191 IGTENEDYIKALSKYGRNIGI 211
>gi|153937414|ref|YP_001387682.1| geranyltranstransferase [Clostridium botulinum A str. Hall]
gi|152933328|gb|ABS38827.1| putative geranyltranstransferase [Clostridium botulinum A str.
Hall]
Length = 290
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 13/196 (6%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
+YE M + + A + P L + L ++A+ AAA+ ++H S IH++LP D
Sbjct: 29 IYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDN 88
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
L + KPT + F +L DA+L + ++ + N + L + +A
Sbjct: 89 DDL-RRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEY---SLKNGEKALEACYAIAKAA 144
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
G G++ GQ ++ +D+ + ++ Y +KKK G L GAILG +
Sbjct: 145 GVDGMIGGQVVDILS-----EDKSIP----LDELYYMHKKKTGALIKASILAGAILGSDT 195
Query: 249 EKEIELLRRYGFYVGM 264
+IELL YG +G+
Sbjct: 196 YTDIELLGEYGDNLGL 211
>gi|260914110|ref|ZP_05920583.1| geranyltranstransferase [Pasteurella dagmatis ATCC 43325]
gi|260631743|gb|EEX49921.1| geranyltranstransferase [Pasteurella dagmatis ATCC 43325]
Length = 306
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 105/233 (45%), Gaps = 21/233 (9%)
Query: 40 NKNKSYWTS-----VHEDIGAHLRQAVVVKE-PVEVYEPMRHFVFAAPVNMAPALCVAAC 93
NK Y S V E I A L Q + + P + E MR+ V + P L A
Sbjct: 8 NKKIMYQFSQDLQQVQERINAFLAQQLNLNTAPSPLIEAMRYGVLLGGKRIRPFLVYATG 67
Query: 94 ELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVAD 153
++G Q AAA L +HA S IH++LP D SL + +PT + AF T +L D
Sbjct: 68 RMLGADLIQLDYAAAGLEAIHAYSLIHDDLPAMDNDSL-RRGQPTCHIAFDEATAILAGD 126
Query: 154 AMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKL 213
A+ F E+L + PA + + L ++ + +A G++G+ GQ +L Q K
Sbjct: 127 ALQAFAFEILTQA--PALSAEQK-LALVSTLAQASGAKGMCLGQSLDLISEQ------KQ 177
Query: 214 NGITDVEMTYETYKKKEGRLHACGAACGAILG--GGSEKEIELLRRYGFYVGM 264
+ ++E + ++ K G L G I G + + L+RY +G+
Sbjct: 178 ISLAELE---QIHRNKTGALLTAALQLGFICSPHFGDKTLAQQLQRYSRAIGL 227
>gi|419720180|ref|ZP_14247423.1| polyprenyl synthetase [Lachnoanaerobaculum saburreum F0468]
gi|383303548|gb|EIC94990.1| polyprenyl synthetase [Lachnoanaerobaculum saburreum F0468]
Length = 296
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 14/171 (8%)
Query: 97 GGHREQAIVA--AAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADA 154
G + I+A AA+ ++H S IH++LP D L + KPT + ++ + +L D
Sbjct: 56 GDEYSEEIIAPFLAAIEMIHTFSLIHDDLPAMDNDRL-RRGKPTTWVSYGEDMAILAGDM 114
Query: 155 MLPFGLELLAS--SDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRK 212
+ E+++ + N R+ R M + RA G+ G++ G QC D +
Sbjct: 115 LSVQAFEIISKKMQETDDFNILKRMSRAMYTLARATGAFGMIGG--------QCVDVEYS 166
Query: 213 LNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVG 263
+T+ M Y Y K G L A G IL G +E E+ LL++ G YVG
Sbjct: 167 GKKMTEEVMKY-IYALKTGALLAASFVVGGILAGANETEVGLLKKAGSYVG 216
>gi|317152625|ref|YP_004120673.1| polyprenyl synthetase [Desulfovibrio aespoeensis Aspo-2]
gi|316942876|gb|ADU61927.1| Polyprenyl synthetase [Desulfovibrio aespoeensis Aspo-2]
Length = 297
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 13/201 (6%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P + + M + + A + P L +A ++GG E+ + AA+L +H S IH++LP
Sbjct: 28 PDSLLQAMEYSLLAGGKRLRPVLTLAWATMLGGDAERVMPFAASLECIHTYSLIHDDLPA 87
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D L + +P+ + + T +L D +L L+ + G + R+LR + +
Sbjct: 88 MDDDDL-RRGRPSNHKRYDEATAILAGDGLLTESFVLMTEASLIRGLPAERVLRAVSVLA 146
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT--YETYKKKEGRLHACGAACGAI 243
A GS G+V GQ +++ G +V + + K G L CGA+
Sbjct: 147 VAAGSGGMVGGQAVDME----------FTGRAEVALDELRAMHAMKTGALITAACECGAV 196
Query: 244 LGGGSEKEIELLRRYGFYVGM 264
L G SE+++E R YG VG+
Sbjct: 197 LAGASERDVENAREYGRAVGV 217
>gi|89099255|ref|ZP_01172133.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
sp. NRRL B-14911]
gi|89086101|gb|EAR65224.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
sp. NRRL B-14911]
Length = 298
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 107/228 (46%), Gaps = 13/228 (5%)
Query: 39 PNKNKSYWTSVH-EDIGAHLRQAVVVKEPVEVYEPMRHFVF-AAPVNMAPALCVAACELV 96
PN ++ VH + + L ++V EV + H+ A + P L A +
Sbjct: 3 PNVQLDSFSEVHIKMLERELEESVSRLAAPEVLKKAMHYSLQAGGKRIRPLLVFATLKAF 62
Query: 97 GGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAML 156
G ++ + AAAA+ ++H S IH++LP D L + KPT + F +L DA+L
Sbjct: 63 GEDTKKGLQAAAAVEMIHTYSLIHDDLPSMDDDDL-RRGKPTSHKVFGEANAILAGDALL 121
Query: 157 PFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGI 216
+ +LLA P ++ L ++ E+ RA G++G+V GQ +++ D D +L I
Sbjct: 122 TYSFQLLAQM-APEDADAEVKLALINELARASGAEGMVGGQTADIEGEDKDLDLEELEYI 180
Query: 217 TDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
+ K G+L A A GA+L E ++ L + ++G+
Sbjct: 181 ---------HVHKTGKLLAFSVAAGALLSRAEESRLKSLNEFAHHLGL 219
>gi|258647197|ref|ZP_05734666.1| geranylgeranyl diphosphate synthase [Prevotella tannerae ATCC
51259]
gi|260853026|gb|EEX72895.1| geranylgeranyl diphosphate synthase [Prevotella tannerae ATCC
51259]
Length = 321
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 19/208 (9%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L Q P +YEP+ + + + P L + AC L E+AI AA ++ H
Sbjct: 12 LSQQAYPTRPAGLYEPIAYALSGGGKRVRPHLTLLACSLYSDDPEKAIPAALSVETYHNH 71
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGR 176
+ +H++ L D L + +PT++ + NT +L D ML L P N+
Sbjct: 72 TLLHDD--LMDGADL-RRGRPTVFRKWDANTAILSGDTMLILAFNHLLEGGYP---NAAE 125
Query: 177 ILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHAC 236
+L+++ R V EGQ ++ Q +D +T+ E E + K L AC
Sbjct: 126 LLQLLARTARE-----VCEGQQYDMNFEQRND-------VTEAEYI-EMIRLKTSVLLAC 172
Query: 237 GAACGAILGGGSEKEIELLRRYGFYVGM 264
GA++ G + +LL +G +G+
Sbjct: 173 ALKMGALVAGAPADQADLLYHFGEQIGL 200
>gi|387813233|ref|YP_005428715.1| geranyltranstransferase [Marinobacter hydrocarbonoclasticus ATCC
49840]
gi|381338245|emb|CCG94292.1| geranyltranstransferase [Marinobacter hydrocarbonoclasticus ATCC
49840]
Length = 298
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 73/134 (54%), Gaps = 4/134 (2%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
+ E MR+ V + PALC+AA +G A+ A AL ++HA S +H++LP D
Sbjct: 36 LQETMRYSVLGGGKRVRPALCMAAARAMGSDESTALAPACALELIHAYSLVHDDLPAMDD 95
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
L + +PT + AF + +L DA+ LL SD PA ++ R+ ++ E+ RA
Sbjct: 96 DDL-RRGRPTAHIAFDEASAILAGDALQTLAFALL--SDAPALSDRQRVT-MISELARAS 151
Query: 189 GSQGVVEGQYNELQ 202
G QG+V GQ +L+
Sbjct: 152 GHQGMVGGQAIDLE 165
>gi|120555348|ref|YP_959699.1| polyprenyl synthetase [Marinobacter aquaeolei VT8]
gi|120325197|gb|ABM19512.1| farnesyl-diphosphate synthase [Marinobacter aquaeolei VT8]
Length = 298
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 73/134 (54%), Gaps = 4/134 (2%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
+ E MR+ V + PALC+AA +G A+ A AL ++HA S +H++LP D
Sbjct: 36 LQETMRYSVLGGGKRVRPALCMAAARAMGSDESTALAPACALELIHAYSLVHDDLPAMDD 95
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
L + +PT + AF + +L DA+ LL SD PA ++ R+ ++ E+ RA
Sbjct: 96 DDL-RRGRPTAHIAFDEASAILAGDALQTLAFALL--SDAPALSDRQRVT-MISELARAS 151
Query: 189 GSQGVVEGQYNELQ 202
G QG+V GQ +L+
Sbjct: 152 GHQGMVGGQAIDLE 165
>gi|49474704|ref|YP_032746.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
quintana str. Toulouse]
gi|49240208|emb|CAF26676.1| Geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
quintana str. Toulouse]
Length = 301
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 15/228 (6%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + + MR+ V + P L + + L E + A+AL +H S IH++
Sbjct: 32 ISRPEALIKAMRYGVLNGGKRLRPFLVIQSGALFDIPAEYCLDVASALECVHCYSLIHDD 91
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA--SSDNPAGNNSGRILRV 180
LP D +L + +PT++ AF T +L +A+L F E++A +S P +++
Sbjct: 92 LPAMDNDTL-RRGQPTVHIAFDEATAILAGNALLTFAFEIIAHKASTLPFETK----IKL 146
Query: 181 MVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAAC 240
+ + ++ G G++ GQ +L+ + D + I+ + + + K L +
Sbjct: 147 ITTLAQSAGLGGMIGGQMLDLEAEKKPQD----SAISILTLQH----MKTAALISFACQA 198
Query: 241 GAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GAI+G S++ E L +G Y+G+ + L T E L K A K
Sbjct: 199 GAIIGNASKELTEKLAAFGTYLGLAFQLTDDLLDITASTEILGKTAGK 246
>gi|395792807|ref|ZP_10472231.1| hypothetical protein MEI_00852 [Bartonella vinsonii subsp.
arupensis Pm136co]
gi|395432364|gb|EJF98353.1| hypothetical protein MEI_00852 [Bartonella vinsonii subsp.
arupensis Pm136co]
Length = 300
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 12/226 (5%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + + MR+ V + P L + + L E ++ A AL +H S IH++
Sbjct: 32 IARPEILLKAMRYGVLNGGKRLRPFLVIQSGALFDIPPEHSLDVACALECVHCYSLIHDD 91
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D +L + +PT++ AF T +L +A+L F E++A A + RI +++
Sbjct: 92 LPAMDNDTL-RRGQPTVHKAFDEATAILAGNALLTFAFEIIAHK-AFALSFETRI-KLIT 148
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+ ++ G G++ GQ +++ + + + MT + K AC A GA
Sbjct: 149 ALAQSAGLGGMIGGQMLDIEAEKTPQESTNI-------MTLQRMKTAALISFACQA--GA 199
Query: 243 ILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
I+ S++ E L +G Y+G+ + L T E+L K A K
Sbjct: 200 IISNASQELTEKLAAFGTYLGLAFQLTDDLLDMTANSEDLGKTAGK 245
>gi|301300958|ref|ZP_07207123.1| putative geranyltranstransferase [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300851425|gb|EFK79144.1| putative geranyltranstransferase [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 277
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 15/195 (7%)
Query: 71 EPMRHFVFAAPVNMAPALCVAACELVGGHREQA-IVAAAALHVMHAASFIHENLPLSDRT 129
E MR+ V A + P L + + +G ++ A +L ++H S IH++LP D
Sbjct: 16 ESMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDLPEMDND 75
Query: 130 SLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMG 189
L + KPT + F +L D +L E L+ +D ++ + ++++ ++ A G
Sbjct: 76 EL-RRGKPTNHKKFGQAIAVLAGDGLLTTSFEWLSLTDI----DNDKKIKLISQLALAAG 130
Query: 190 SQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSE 249
QG+V GQ +++ + +K N +E + K G L G IL S+
Sbjct: 131 PQGMVSGQTDDILG-----ESKKYN----LEELKHLHAGKTGALLRYACVAGGILSDASD 181
Query: 250 KEIELLRRYGFYVGM 264
++ELLR+YG G+
Sbjct: 182 NQLELLRKYGENFGL 196
>gi|94311552|ref|YP_584762.1| geranyltranstransferase [Cupriavidus metallidurans CH34]
gi|93355404|gb|ABF09493.1| geranyltranstransferase [Cupriavidus metallidurans CH34]
Length = 294
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 107/233 (45%), Gaps = 17/233 (7%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++E MR+ V + P L AA E+VG E AA A+ ++HA S +H+++P
Sbjct: 30 PYTLHEAMRYAVLGGGKRVRPLLVHAAGEVVGATPEACDAAACAVEMIHAYSLVHDDMPC 89
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D L + +PT++ A+ T LLV DA+ +LA + PA R L+V+ E+
Sbjct: 90 MDDDDL-RRGRPTVHKAYDEATALLVGDALQSQAFIVLAQT--PALAAEAR-LKVVAELA 145
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
A GS G+ GQ +LQ L G+ ++ K G L GA+ G
Sbjct: 146 VASGSIGMCGGQAIDLQNVGKAMTREALEGM---------HRMKTGALLRASVRMGALCG 196
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVNSFNDE 298
+ + L RY VG+ +V L T + L K A K ++ ND+
Sbjct: 197 NIDQAGLVALDRYAAAVGLAFQVVDDILDVTADTATLGKTAGK----DAANDK 245
>gi|332882802|ref|ZP_08450413.1| heptaprenyl diphosphate synthase component 2 family protein
[Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332679304|gb|EGJ52290.1| heptaprenyl diphosphate synthase component 2 family protein
[Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 322
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 19/214 (8%)
Query: 51 EDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAAL 110
E+ AHL+ ++ VKEP +YEP+ + + + P L + A +L GG +A+ AAAA+
Sbjct: 9 EEFLAHLKTSIAVKEPRNLYEPIDYILQLGGKRLRPVLTLIAADLFGGDYRKALPAAAAV 68
Query: 111 HVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPA 170
V H S +H++ + D SL + K T++ + N +L DAML LL D+
Sbjct: 69 EVFHNFSLVHDD--IMDNASL-RRGKATVHQKWNSNIAILSGDAMLISAYCLL---DSYP 122
Query: 171 GNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKE 230
+ + ++ + + V EGQ ++ D + + + + K
Sbjct: 123 PDTFAALAKLF-----SKTALEVCEGQQWDM--------DFETQAQVSIPQYLQMIRYKT 169
Query: 231 GRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
L GAI+ G S + L+ +G +G+
Sbjct: 170 AVLVGAALQMGAIIAGASIENQRLIYDFGVTIGL 203
>gi|212638788|ref|YP_002315308.1| geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus
WK1]
gi|212560268|gb|ACJ33323.1| Geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus
WK1]
Length = 290
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 104/222 (46%), Gaps = 16/222 (7%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
+ Y + + + A++ ++ P + E M + + A + P L ++ +
Sbjct: 6 RQYKEQIEQQLPAYIES---LQAPQTIKEAMLYSLQAGGKRIRPLLLLSTLHAFRKPIDI 62
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
+ A AL ++H S IH++LP D L + KPT + F +L DA+L + ++
Sbjct: 63 GMSVACALEMIHTYSLIHDDLPSMDNDDL-RRGKPTNHKVFGEANAILAGDALLTYAFQV 121
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+A + + +R++ E+ +A G +G+V GQ +L+ I+ ++
Sbjct: 122 VADDKTISSDVK---VRLISELAKAAGPEGMVGGQVADLEGEG--------KTISLQQLE 170
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
Y ++ K G+L GAILG +E+++ LL + ++G+
Sbjct: 171 Y-IHRHKTGKLLQYSIRAGAILGEATEQQLTLLTLFADHLGL 211
>gi|15922378|ref|NP_378047.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus tokodaii str.
7]
gi|342306635|dbj|BAK54724.1| multifunctional geranylgeranyl diphosphate synthase [Sulfolobus
tokodaii str. 7]
Length = 329
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 104/218 (47%), Gaps = 17/218 (7%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
E+YE + A + P + V++ +L+GG +A +A A++ V+H + IH+++ D
Sbjct: 28 ELYEASFYLFKAGGKRLRPLILVSSADLLGGDLNRAYLAGASVEVLHTFTLIHDDIMDED 87
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
T + PT++ + +L D + E+L ++ G +S +I R T+A
Sbjct: 88 TTR---RGMPTVHVKWGIPMAILAGDLLHAKAFEIL--NEAFRGMSSNKITRAFEIFTKA 142
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTY-ETYKKKEGRLHACGAACGAILGG 246
+ + EGQ ++Q + +T E Y + K+K L + AA G ++
Sbjct: 143 III--ISEGQALDMQFE---------DKVTVSEEEYLDMIKRKTAMLFSSSAALGGLIAT 191
Query: 247 GSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
+EKEI+ L YG +G+ IV LG + +EL K
Sbjct: 192 DNEKEIQALADYGLNLGISFQIVDDILGLIADEKELGK 229
>gi|340785925|ref|YP_004751390.1| geranyltranstransferase [Collimonas fungivorans Ter331]
gi|340551192|gb|AEK60567.1| Geranyltranstransferase [Collimonas fungivorans Ter331]
Length = 299
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 15/227 (6%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P +++ MR+ V + P L AA EL A AAAA+ ++HA S +H+++P
Sbjct: 29 PARLHQAMRYAVLDGGKRVRPLLVFAAGELFATPLTVAQRAAAAVEMIHAYSLVHDDMPC 88
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGN--NSGRILRVMVE 183
D +L + KPT++ + T LLV DA+ +LA + G +S R + ++
Sbjct: 89 MDDDAL-RRGKPTVHVQYDEATALLVGDALQSQAFVVLAEAGAEIGAEIDSARQIVMLRL 147
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLN-GITDVEMTYETYKKKEGRLHACGAACGA 242
+ +A GS G+ GQ +L LN + ++E + +K K G L GA
Sbjct: 148 LAQASGSLGMCGGQAIDLASV-------GLNLSLAELE---QMHKLKTGALLRASVLLGA 197
Query: 243 ILGGG-SEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
G + EIE L YG +G+ +V L T + L K A K
Sbjct: 198 WGGKALAPAEIEALEAYGTAIGLAFQVVDDILDATADSATLGKTAGK 244
>gi|294054659|ref|YP_003548317.1| polyprenyl synthetase [Coraliomargarita akajimensis DSM 45221]
gi|293613992|gb|ADE54147.1| Polyprenyl synthetase [Coraliomargarita akajimensis DSM 45221]
Length = 294
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 105/219 (47%), Gaps = 14/219 (6%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
PV ++ MR+ + A + P L +A EL ++ I AA A+ +H + IH++LP
Sbjct: 31 PVRLHRAMRYSMEAGGKRLRPVLVLALSELADSGQD-PIAAAVAIECLHTYTLIHDDLPS 89
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D + L + +P+ + F T +L DA+L F ELL+ ++ + ++ ++
Sbjct: 90 LDNSDL-RRGRPSCHKQFDEPTAVLAGDALLTFAFELLS---REYASSPELAVGLIQDLA 145
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
A GS+ ++ GQ ++ D++ + ++ T + Y ++ K L + G
Sbjct: 146 DASGSRRLIGGQQEDI-----DNEGKPVDADT---LQY-IHENKTAALLTAALSMGLRFT 196
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
+ ++L+++ GF++GM IV L T E + K
Sbjct: 197 QPGAQALQLIQKVGFHLGMTFQIVDDILDATSSAEAMGK 235
>gi|225848385|ref|YP_002728548.1| geranyltranstransferase (Farnesyl-diphosphate synthase)
[Sulfurihydrogenibium azorense Az-Fu1]
gi|225643069|gb|ACN98119.1| geranyltranstransferase (Farnesyl-diphosphate synthase)
[Sulfurihydrogenibium azorense Az-Fu1]
Length = 288
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 112/256 (43%), Gaps = 20/256 (7%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHR-- 100
K Y E I +L+ + P E+++ M + + + P L + + + V
Sbjct: 5 KIYLKQKAELINTYLKNLIPKGTPKELFDAMEYSLTVGGKRIRPILIIESSKAVNPDVDI 64
Query: 101 EQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGL 160
E I A ++ +H S IH++LP D L + KPT + F +L D +L +
Sbjct: 65 EDFIDVALSVEFIHTYSLIHDDLPAMDDDDL-RRGKPTCHKVFGEAIAILAGDGLLTYAF 123
Query: 161 ELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVE 220
EL++ + + ++L+V+ ++ ++G G+V GQ ++ L D++
Sbjct: 124 ELISGNQKITPD---KLLKVINVISNSVGVYGMVGGQAGDI-----------LENFKDID 169
Query: 221 MTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIE 280
+ K + + G IL G S+KEIE L+ YG Y+G+ I L + E
Sbjct: 170 FIHT---HKTAKFISGCCQVGGILAGASKKEIENLKNYGLYIGIAFQIWDDILDEIGDEE 226
Query: 281 ELKKLAFKLREVNSFN 296
++ K K +E N
Sbjct: 227 KVGKKLHKDKEKNKIT 242
>gi|410939916|ref|ZP_11371740.1| polyprenyl synthetase [Leptospira noguchii str. 2006001870]
gi|410784954|gb|EKR73921.1| polyprenyl synthetase [Leptospira noguchii str. 2006001870]
Length = 313
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 6/227 (2%)
Query: 46 WTSVHEDIGAHLRQAVVVKEPV-EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAI 104
+ S+ E+ +++ K+ E++E M++ + A + P L +AA + + +
Sbjct: 13 YKSMFENFLNSQTLSILAKQSAPELFEAMKYSLVAGGKRLRPVLALAAFGGIQNETQNVL 72
Query: 105 VAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA 164
+ A+L +H S IH++LP D + PT++ F T +L DA+ F ++
Sbjct: 73 LLGASLECIHTYSLIHDDLPSMDNDDF-RRGLPTLHKKFSEATAILAGDALNSFAFYFIS 131
Query: 165 SSDNPAGNNSGRILRVMVEMTRA-MGSQGVVEGQYNELQCSQCDDDDRKLNGITD-VEMT 222
G++ + R ++E+ A G+ G+V GQ +LQ + + + L TD +EM
Sbjct: 132 WIRVENGDHF--LYRDLLEILHAGCGAPGMVSGQVYDLQMERENSKESHLTNQTDKIEML 189
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIV 269
T++ K G L G L +K L +YG +G++ I
Sbjct: 190 QLTHRLKTGALIKSALLLGNRLRKDWKKRETSLSQYGEDLGLLFQIT 236
>gi|13383243|dbj|BAB39472.1| putative GGPP synthase 1 [Metaplexis japonica]
Length = 127
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 72/134 (53%), Gaps = 10/134 (7%)
Query: 132 IPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQ 191
+ + KPT + F + +L D++L F E +A++ AG R+L + E+ +++G++
Sbjct: 4 LRRGKPTNHKVFGEDVAVLAGDSLLAFAFEYIATA--TAGVEPARVLAAIGELAKSIGTE 61
Query: 192 GVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKE 251
G+V GQ +L C+ + G+ +E + K L GAILGGG+++E
Sbjct: 62 GLVAGQVVDLSCT-----GKSNVGLDQLEFIH---IHKTAALLEASVVLGAILGGGTQEE 113
Query: 252 IELLRRYGFYVGMI 265
+E LRR+ +G++
Sbjct: 114 VEKLRRFARCIGLL 127
>gi|296387401|ref|ZP_06876900.1| geranyltranstransferase [Pseudomonas aeruginosa PAb1]
Length = 207
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 4/139 (2%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
+E +YE MR+ V + P L AACE +GG ++A AA A+ ++HA S +H++L
Sbjct: 26 EELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDL 85
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASS-DNPAGNNSGRILRVMV 182
P D L + +PT + AF T +L AD + E+LA + NP L ++
Sbjct: 86 PAMDDDDL-RRGQPTTHRAFDEATAILAADGLQALAFEVLADTRRNP--QEHAVCLEMLT 142
Query: 183 EMTRAMGSQGVVEGQYNEL 201
+ RA GS G+V GQ +L
Sbjct: 143 RLARAAGSAGMVGGQAIDL 161
>gi|429747504|ref|ZP_19280769.1| polyprenyl synthetase [Capnocytophaga sp. oral taxon 380 str.
F0488]
gi|429163014|gb|EKY05276.1| polyprenyl synthetase [Capnocytophaga sp. oral taxon 380 str.
F0488]
Length = 321
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 56 HLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHA 115
H+ + KEP+ +YEP+++ + + P L + A ++ G +A+ AA A+ V H
Sbjct: 14 HIEKIFTPKEPIHLYEPIQYILNLGGKRIRPILTLIATDIFGKDYHKALNAATAIEVFHN 73
Query: 116 ASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSG 175
S IH++ + D SL + KPT++ + N +L DAML +LL D P+
Sbjct: 74 FSLIHDD--IMDNASL-RRGKPTVHQKWDTNVGILSGDAMLIIAYKLL--EDYPS----- 123
Query: 176 RILRVMVEMTRAMGSQG--VVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRL 233
++ E+ + + V EGQ Q D D KL ++ +E+ + K L
Sbjct: 124 ---KIFQELVKTLSETALKVCEGQ-------QMDMDFEKLQEVS-IEVYMQMISYKTSVL 172
Query: 234 HACGAACGAILGGGSEKEIELLRRYGFYVGM 264
G+I+ +++ + +G +G+
Sbjct: 173 IGAALQMGSIISETTKENQINMYNFGLNLGI 203
>gi|169828970|ref|YP_001699128.1| geranyltranstransferase [Lysinibacillus sphaericus C3-41]
gi|168993458|gb|ACA40998.1| Geranyltranstransferase [Lysinibacillus sphaericus C3-41]
Length = 293
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 104/220 (47%), Gaps = 17/220 (7%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ PV++ + M + + A + P +A EL + + ++ A + ++H S IH++
Sbjct: 27 IDAPVDLKDSMLYSLKAGGKRIRPLFVLAVLELYRKNLQDGLIVGAVIEIIHTYSLIHDD 86
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D + KPT + + L DA+ +LA D A RI V +
Sbjct: 87 LPSMDNDDF-RRGKPTNHKVYGEALATLAGDALNTLAFGILARMDVTA---EKRIELVQL 142
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
++ A G++G+V GQ +++ Q R+L+ +T++E + + K G L GA
Sbjct: 143 -LSVAAGAEGMVGGQVLDMEGEQ-----RQLD-LTELE---QVHVNKTGALLRFSIEAGA 192
Query: 243 ILGGGSEKEIELLRRYGFYVGM---IQGIVSRRLGPTEEI 279
+L S+++ L+ Y ++G+ IQ + G TEE+
Sbjct: 193 VLADASKQDRATLKEYAHHIGLAFQIQDDILDIEGTTEEL 232
>gi|374312746|ref|YP_005059176.1| geranyltranstransferase [Granulicella mallensis MP5ACTX8]
gi|358754756|gb|AEU38146.1| Geranyltranstransferase [Granulicella mallensis MP5ACTX8]
Length = 324
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 100/250 (40%), Gaps = 36/250 (14%)
Query: 65 EPVEVYEPMRHFVFAAPVNMAPALCVAACELVG-------------GHREQAIVAAAALH 111
EP ++ MRH FA + P LC+ A ++V GH E AAAL
Sbjct: 30 EPYSIHRAMRHSTFAGGKRLRPILCMEAAKMVASTDFYPPEEAAPAGHPEGVANLAAALE 89
Query: 112 VMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAG 171
++H S IH++LP D L + +PT + F T +L DA+ + +AS P
Sbjct: 90 MLHTYSLIHDDLPALDNDDL-RRGQPTCHVVFGEATAILAGDALQTLAFQTIASLPAPPE 148
Query: 172 NNSGRILRVMVEMTRAMG---------SQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+ ++ + + +G + G++ GQ +++ + I
Sbjct: 149 AVVAILRKISLSIGTGIGRWGDHDTGIAPGMIGGQVVDIESEGTKPTPDLVEAI------ 202
Query: 223 YETYKKKEGRLHACGAACGAILG----GGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEE 278
++ K G L GAI G G E +R +G G+ IV L T+
Sbjct: 203 ---HRAKTGALITVSIVAGAIYGSSRHGLPSSYHERIRTFGEKAGLAFQIVDDVLDMTQS 259
Query: 279 IEELKKLAFK 288
EEL K A K
Sbjct: 260 SEELGKTAGK 269
>gi|254481105|ref|ZP_05094351.1| polyprenyl synthetase superfamily protein [marine gamma
proteobacterium HTCC2148]
gi|214038900|gb|EEB79561.1| polyprenyl synthetase superfamily protein [marine gamma
proteobacterium HTCC2148]
Length = 303
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 86 PALCVAACELVGG-HREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFK 144
PA+ A + VGG H E A+ AL ++H S IH++LP D + + KP+++ A++
Sbjct: 58 PAILYFAAQCVGGGHCESLDQASCALELVHTYSLIHDDLPAMDDDDM-RRGKPSLHKAYE 116
Query: 145 PNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCS 204
+T +LV D + ELL + N R+++V+ E A G +G+V GQY ++Q +
Sbjct: 117 ESTAILVGDGLQARAFELLIDAPNLTAEQKIRMVKVLAE---AAGLKGMVGGQYIDIQVT 173
Query: 205 QCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
D IT E+ + K G L A G I +E+++ L YG ++G+
Sbjct: 174 GAD--------ITLDELQ-AMHSMKTGALIRASLALGGIAANATEEQLAALDEYGTHIGL 224
Query: 265 IQGIVSRRLGPTEEIEELKKLAFKLREVN 293
+ L + E L K K E N
Sbjct: 225 AFQVADDILDVEGDAETLGKTQGKDAEAN 253
>gi|254509029|ref|ZP_05121134.1| geranyltranstransferase [Vibrio parahaemolyticus 16]
gi|219548064|gb|EED25084.1| geranyltranstransferase [Vibrio parahaemolyticus 16]
Length = 294
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 97/228 (42%), Gaps = 16/228 (7%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
+ + MR+ + P L +++G EQ AAA+ +HA S IH++LP D
Sbjct: 30 LIDAMRYGLLLGGKRARPFLVYITGQMLGSSLEQLDTPAAAIECIHAYSLIHDDLPAMDD 89
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
L + +PT + F T +L DA+ +LA + RI+ V V + A
Sbjct: 90 DEL-RRGQPTCHIKFDEATAILTGDALQTLAFTILAEGQLSPEAEAQRIMMVKV-LAEAS 147
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
G+ G+ GQ +L N I ++ E ++ K G L C GA+ G
Sbjct: 148 GAAGMCMGQALDLAAE---------NRIVSLQELEEIHRNKTGALMKCAIRMGALAAG-- 196
Query: 249 EKEIE---LLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVN 293
EK IE LL +Y +G+ + L + E L K +E+N
Sbjct: 197 EKGIEVLPLLDKYADAIGLAFQVQDDILDVISDTETLGKPQGSDQELN 244
>gi|170757695|ref|YP_001781434.1| geranyltranstransferase [Clostridium botulinum B1 str. Okra]
gi|169122907|gb|ACA46743.1| putative geranyltranstransferase [Clostridium botulinum B1 str.
Okra]
Length = 290
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
++YE M + + A + P L + L ++A+ AAA+ ++H S IH++LP D
Sbjct: 28 KIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMD 87
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
L + KPT + F +L DA+L + ++ + N + L+ + +A
Sbjct: 88 NDDL-RRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEY---SLKNGEKALKACYTIAKA 143
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G++ GQ ++ IT E+ Y +KKK G L GAILG
Sbjct: 144 AEVDGMIGGQVVDILSED--------KSITLDELYY-MHKKKTGALIKASILAGAILGSA 194
Query: 248 SEKEIELLRRYGFYVGM 264
+ +IELL YG +G+
Sbjct: 195 TYTDIELLGEYGDNLGL 211
>gi|42521829|ref|NP_967209.1| geranyltranstransferase [Bdellovibrio bacteriovorus HD100]
gi|39574359|emb|CAE77863.1| geranyltranstransferase [Bdellovibrio bacteriovorus HD100]
Length = 289
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 97/200 (48%), Gaps = 13/200 (6%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
P L + EL G +E+ + AAA+ ++H S IH++LP D + + KPT + F
Sbjct: 57 PVLSLLVGELFGAGKERILPFAAAVEMIHTYSLIHDDLPCMDNDDM-RRGKPTNHKVFGE 115
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
+ LL DA+L L+A + G+NS + + ++ A G +G+V GQ +L+
Sbjct: 116 DFALLAGDALLTEAFMLIAEN---YGDNSFLVGHLTRLLSSAAGIRGMVGGQAIDLRAG- 171
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
D++++ +E ++ K G L A++ G EIE L+++G +G+
Sbjct: 172 ----DKQMS----LEELTHLHRLKTGALIRVAVEGAAVIAGAKPTEIESLKKFGEGLGLA 223
Query: 266 QGIVSRRLGPTEEIEELKKL 285
+ L E+ ++L+
Sbjct: 224 FQVADDVLDHGEKGQDLRSF 243
>gi|392955274|ref|ZP_10320817.1| geranylgeranyl pyrophosphate synthase [Bacillus macauensis ZFHKF-1]
gi|391878746|gb|EIT87323.1| geranylgeranyl pyrophosphate synthase [Bacillus macauensis ZFHKF-1]
Length = 292
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 105/201 (52%), Gaps = 13/201 (6%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
K P + E M + + A + P L +A E G E + AA AL V+H S IH++L
Sbjct: 26 KIPQSLQESMLYSLQAGGKRLRPILVLAVLEACGKPLEIGLEAACALEVVHTYSLIHDDL 85
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE 183
P D + KPT + F T +L D +L EL+A+S + + + ++
Sbjct: 86 PCMDDDDF-RRGKPTNHKVFGEATAVLAGDGLLTVSFELIAASPHYTADQK---VALLAL 141
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAI 243
+ +A G++G+V GQ +++ +D++L +T+++ +E +K G+L + GAI
Sbjct: 142 LAKAAGAEGMVGGQMADMES-----EDQQLT-LTELQRVHE---RKTGKLLEAAVSFGAI 192
Query: 244 LGGGSEKEIELLRRYGFYVGM 264
LGG S + + L+RY +++G+
Sbjct: 193 LGGVSNEAFDHLQRYSYHLGI 213
>gi|10801556|dbj|BAB16691.1| GGPP synthase 1 [Hevea brasiliensis]
Length = 127
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 10/134 (7%)
Query: 132 IPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQ 191
+ + KPT + F + +L DA+L F E +A S +S RI+R + E+ +A+G++
Sbjct: 4 LRRGKPTNHIVFGEDVAVLAGDALLAFAFEHIAVS--TLNVSSARIVRAVGELAKAIGAE 61
Query: 192 GVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKE 251
G+V GQ ++ + D+E + K +L GAILGGG+++E
Sbjct: 62 GLVAGQVVDINSEGSSE--------VDLEKLEFIHIHKTAKLLEGAVVLGAILGGGTDEE 113
Query: 252 IELLRRYGFYVGMI 265
+E LR+Y +G++
Sbjct: 114 VEKLRKYARGIGLL 127
>gi|256379027|ref|YP_003102687.1| polyprenyl synthetase [Actinosynnema mirum DSM 43827]
gi|255923330|gb|ACU38841.1| Polyprenyl synthetase [Actinosynnema mirum DSM 43827]
Length = 346
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 93/192 (48%), Gaps = 25/192 (13%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
P L + A VGG E A+ AA A+ ++H S +H+++ D T + +PT + F
Sbjct: 67 PVLVLLAARAVGGRAEDALPAAVAVELVHNFSLLHDDVMDGDATR---RHRPTAWAVFGV 123
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
N +L DA++ L++LA S +PA R +V ++ A+ Q +++GQ ++L +
Sbjct: 124 NAAVLAGDALMTLALDVLAGSGHPAAA------RGIVLLSAAV--QELLDGQSSDLGFEE 175
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAAC---GAILGGGSEKEIELLRRYGFYV 262
D+ G+ E + EG+ A AC GA+ GGGS ++ L +G
Sbjct: 176 RDE-----VGVA------ECVRMAEGKTAALLGACCSLGALFGGGSADQVGELGLFGERT 224
Query: 263 GMIQGIVSRRLG 274
G+ V LG
Sbjct: 225 GLAFQFVDDLLG 236
>gi|402772128|ref|YP_006591665.1| polyprenyl synthetase [Methylocystis sp. SC2]
gi|401774148|emb|CCJ07014.1| Polyprenyl synthetase [Methylocystis sp. SC2]
Length = 418
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 89/201 (44%), Gaps = 10/201 (4%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
++ P + E MR+ + P L + A L G + A+ A AL ++H S +H++
Sbjct: 146 IRRPARLLEAMRYSSLGGGKRLRPFLVIEAARLFGVVGDAALRTACALEMIHCYSLVHDD 205
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D L + +PT + AF T +L D +L + +++A A ++G +++
Sbjct: 206 LPAMDDDDL-RRGRPTTHKAFDEATAILAGDGLLTYAFDVVADPQTHA--DAGVRAALVL 262
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
M RA G G+V GQ +L +E T + K G L G
Sbjct: 263 AMARAAGLGGMVGGQALDLAAETAATP-------LTLEATLQMQAMKTGALLRFAVDAGG 315
Query: 243 ILGGGSEKEIELLRRYGFYVG 263
ILGG S + L RYG +G
Sbjct: 316 ILGGASASQARALTRYGEALG 336
>gi|304322149|ref|YP_003855792.1| geranyltranstransferase (farnesyl-diphosphate synthase)
[Parvularcula bermudensis HTCC2503]
gi|303301051|gb|ADM10650.1| putative geranyltranstransferase (farnesyl-diphosphate synthase)
[Parvularcula bermudensis HTCC2503]
Length = 296
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 90/212 (42%), Gaps = 15/212 (7%)
Query: 73 MRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLI 132
M H + P L + A + G E A+ AA A+ ++H S IH++LP D
Sbjct: 41 MAHGALGGGKRLRPFLVLEAASIFGADDEAALPAATAIEMVHCYSLIHDDLPAMDDAD-T 99
Query: 133 PKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQG 192
+ +P+++ A+ +L D +L LL + R++R E+ A GS G
Sbjct: 100 RRGRPSVHKAYDEAIAILAGDGLLTDAFALLTEEGTYTAPTACRLVR---ELALAAGSGG 156
Query: 193 VVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEI 252
+V GQ +L D+ + GI ++K G L A GAI+G + +
Sbjct: 157 MVGGQMMDLYPDGG--DEAAIVGI---------QRRKTGALIEAAAVMGAIVGAAAPSDE 205
Query: 253 ELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
LR+Y VG +V L T EL K
Sbjct: 206 AALRQYAAAVGEAFQVVDDILDETASSAELGK 237
>gi|284162658|ref|YP_003401281.1| dimethylallyltranstransferase [Archaeoglobus profundus DSM 5631]
gi|284012655|gb|ADB58608.1| Dimethylallyltranstransferase [Archaeoglobus profundus DSM 5631]
Length = 327
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 18/200 (9%)
Query: 65 EPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLP 124
EP E+Y+ H + A + P L + +CE +G + + +A A+ ++H + IH+++
Sbjct: 34 EPEELYKASYHLIKAGGKRLRPVLTLLSCEAIGRDWKPILPSAIAIELIHNFTLIHDDIM 93
Query: 125 LSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEM 184
D + PT++ F T +L D + E+L+ N N R + V+ ++
Sbjct: 94 DKDEYR---RGVPTVHRLFGEATAILAGDTLFAKAFEILSKC-NVEAENVIRAVEVIADV 149
Query: 185 TRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAIL 244
+ EGQY +++ + DD VE + +KK G L AC + A+L
Sbjct: 150 CVK-----ICEGQYMDMEFEKRDD--------VSVEDYLKMVEKKTGVLIACSCSIPAVL 196
Query: 245 GGGSEKEIELLRRYGFYVGM 264
G EK ++ L +G G+
Sbjct: 197 -YGEEKYVKPLWDFGLNCGI 215
>gi|295090870|emb|CBK76977.1| Geranylgeranyl pyrophosphate synthase [Clostridium cf.
saccharolyticum K10]
Length = 298
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 18/201 (8%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
++E M + V A + P L L GG ++ AA+ ++H +S IH++LP D
Sbjct: 32 IFEAMNYSVRAGGKRLRPLLMREVYRLFGGQGKEVEPFMAAIEMIHTSSLIHDDLPCMDN 91
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE-----LLASSDNPAGNNSGRILRVMVE 183
+ K T + A+ + +L DA+L + +E L+ +D GR + ++ E
Sbjct: 92 DEY-RRGKKTTWVAYGYDMAVLAGDALLIYAVETASRAFLSGADAVMAGRIGRCIHILSE 150
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAI 243
T G G++ GQ +++ + KL+ I Y+ K G L GA+
Sbjct: 151 KT---GIYGMIGGQTVDVELTNKPVPREKLDFI---------YRLKTGALLEASMMIGAV 198
Query: 244 LGGGSEKEIELLRRYGFYVGM 264
L G S++E++ + + VGM
Sbjct: 199 LAGASKEELDTVEKIAANVGM 219
>gi|52080961|ref|YP_079752.1| polyprenyl synthetase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|319645081|ref|ZP_07999314.1| YqiD protein [Bacillus sp. BT1B_CT2]
gi|404489843|ref|YP_006713949.1| (2E,6E)-farnesyl diphosphate synthase IspA [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|423682933|ref|ZP_17657772.1| polyprenyl synthetase [Bacillus licheniformis WX-02]
gi|52004172|gb|AAU24114.1| Polyprenyl synthetase,Polyprenyl synthetase [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|52348839|gb|AAU41473.1| (2E,6E)-farnesyl diphosphate synthase IspA [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|317392890|gb|EFV73684.1| YqiD protein [Bacillus sp. BT1B_CT2]
gi|383439707|gb|EID47482.1| polyprenyl synthetase [Bacillus licheniformis WX-02]
Length = 296
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 111/222 (50%), Gaps = 14/222 (6%)
Query: 43 KSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQ 102
KS T + E + +++ ++ P + E M + + A + P L +A G E
Sbjct: 10 KSRKTVIEERLPMYIKD---LQAPSILKESMLYSLEAGGKRLRPILVLALLHAYGKDEEA 66
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
I A+ ++H S IH++LP D L + KPT + + T +L DA+L ++
Sbjct: 67 GIPVGCAVEMIHTYSLIHDDLPCMDDDDL-RRGKPTNHKIYGEATAILAGDALLTESFKM 125
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMT 222
+ +S+ P+ ++ + +R++ E+ A G++G+V GQ +++ + K + +++
Sbjct: 126 I-TSNMPSDVSAEKRIRLVNELISAAGAEGMVGGQILDMEA------ESKSVSLDELQRI 178
Query: 223 YETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
+E K +L + GAIL SEKEIE LR + ++G+
Sbjct: 179 HEG---KTAKLLSFSVIAGAILADASEKEIEKLREFSHHIGI 217
>gi|30249147|ref|NP_841217.1| polyprenyl synthetase [Nitrosomonas europaea ATCC 19718]
gi|30180466|emb|CAD85071.1| Polyprenyl synthetase [Nitrosomonas europaea ATCC 19718]
Length = 297
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 101/235 (42%), Gaps = 25/235 (10%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P +++ MR+ V + P L AA EL G + A +A AA+ ++H S +H++LP
Sbjct: 31 PARLHDAMRYSVLGGGKRVRPLLSFAAGELSGADKTHATIAGAAVELIHVYSLVHDDLPC 90
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D +L + KPT + + T LLV D++ +LL + N V +EM
Sbjct: 91 MDNDTL-RRGKPTCHVRYDEPTALLVGDSLQSLAFQLLTET------NLTEDPHVQLEMV 143
Query: 186 R----AMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHAC---GA 238
R A GS+G+ GQ +L D ++ E+ + K + A GA
Sbjct: 144 RHLAFAAGSRGMAGGQAIDL--------DSVGKTLSLPELEFMHIHKTGALIRAAVILGA 195
Query: 239 ACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVN 293
CG L E + +LL + +G+ ++ L L K A K E N
Sbjct: 196 RCGNRL---DETQFKLLDHFAKCMGLAFQVIDDILDTEATTAALGKTAGKDAENN 247
>gi|209965378|ref|YP_002298293.1| geranyltranstransferase [Rhodospirillum centenum SW]
gi|209958844|gb|ACI99480.1| geranyltranstransferase [Rhodospirillum centenum SW]
Length = 289
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Query: 62 VVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHR-EQAIVAAAALHVMHAASFIH 120
V P + E MR+ VF + P LCVA G E AAA++ ++H AS +H
Sbjct: 20 VSGTPPRLAEAMRYSVFPGGHRLRPRLCVAVARACGDDAPELTDAAAASIELLHCASLVH 79
Query: 121 ENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRV 180
++LP D S I +SKP+++ AF +L D ++ +LLA + A R++ +
Sbjct: 80 DDLPCFDDAS-IRRSKPSVHKAFGEPLAVLAGDGLIVLAFDLLARA---AAQRPDRLIPL 135
Query: 181 MVEMTRAMG-SQGVVEGQYNELQ 202
M ++R++G G++ GQ E +
Sbjct: 136 MGVVSRSVGVPSGIIAGQAWECE 158
>gi|390631100|ref|ZP_10259067.1| Geranyltranstransferase [Weissella confusa LBAE C39-2]
gi|390483660|emb|CCF31415.1| Geranyltranstransferase [Weissella confusa LBAE C39-2]
Length = 287
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 15/216 (6%)
Query: 49 VHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAA 108
+ E + L+Q+ K + + M + V A + P L +A + G + AA+
Sbjct: 14 IEETLATELKQSTTEKT---LRDAMTYAVMAGGKRLRPLLTLAVAQSYGMDVPGLVRAAS 70
Query: 109 ALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDN 168
AL ++H S IH++LP D + + KPT + F + +L DA+ P + LAS +
Sbjct: 71 ALELIHTYSLIHDDLPAMDNDDM-RRGKPTTHRQFGEDVAILAGDALQPLAYQWLAS--D 127
Query: 169 PAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKK 228
P + + +++ A G+ G+V GQ ++ + D IT ++ + +
Sbjct: 128 PLLTTPQKA-ELTLQLALASGANGMVAGQVMDMAATNADT-------IT-LDQAKAIHYR 178
Query: 229 KEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
K L A A G I+ SE E L +G G+
Sbjct: 179 KTSALIAYAAIAGGIMAHASEAVKEQLWNFGMAYGL 214
>gi|325846498|ref|ZP_08169413.1| putative geranyltranstransferase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325481256|gb|EGC84297.1| putative geranyltranstransferase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 279
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 91/197 (46%), Gaps = 17/197 (8%)
Query: 86 PALCVAACELVGGHR--EQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAF 143
P + + C ++ G + + I A +L ++HA S +H+++P D + K T++ F
Sbjct: 50 PIVFLETCRMLLGDKLDKNIIDCALSLEMVHAYSLVHDDMPCMDNDDY-RRGKFTVHKKF 108
Query: 144 KPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQC 203
+ +LV D++L F E + + R L+ + RA G G+++GQ +++
Sbjct: 109 GEDQAILVGDSLLSFAFENILN----LSIEDQRFLKPARYLARACGKDGMIKGQIFDIKA 164
Query: 204 SQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVG 263
++ + L+ I DV YK K RL + ++++E L Y +Y+G
Sbjct: 165 NK----NENLSYILDV------YKNKTSRLFMAALMMAGLYCQLDDEKLEKLENYAYYLG 214
Query: 264 MIQGIVSRRLGPTEEIE 280
M + L +EIE
Sbjct: 215 MAFQLQDDILDKYDEIE 231
>gi|384214679|ref|YP_005605843.1| geranyltranstransferase [Bradyrhizobium japonicum USDA 6]
gi|354953576|dbj|BAL06255.1| geranyltranstransferase [Bradyrhizobium japonicum USDA 6]
Length = 307
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 10/201 (4%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + + MR+ + P L V + + G RE A++ AAL +H S IH++
Sbjct: 37 IARPKRLMDAMRYSSLNGGKRLRPFLVVESAAVFGIPREAALLVGAALECIHCYSLIHDD 96
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D + L + +PT++ T +L D +L +++ + D + + R+L +
Sbjct: 97 LPAMDNSDL-RRGRPTLHKKTDDATAILAGDGLLTLAFDIV-TRDEIHRDANVRLL-LTR 153
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+ R G G+V GQ +L + G +++ + K G L G GA
Sbjct: 154 ALARCAGIGGMVGGQILDLAGEG------RFGGNEPIDVA-RIQQMKTGALLRYGCIAGA 206
Query: 243 ILGGGSEKEIELLRRYGFYVG 263
+LG S+KE + L YG +G
Sbjct: 207 LLGQASQKEYQALDDYGRALG 227
>gi|260912495|ref|ZP_05919030.1| polyprenyl synthetase [Prevotella sp. oral taxon 472 str. F0295]
gi|260633374|gb|EEX51529.1| polyprenyl synthetase [Prevotella sp. oral taxon 472 str. F0295]
Length = 324
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 19/201 (9%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
++P +YEP+R+ + + P L + A L E + A L H + +H++
Sbjct: 22 RKPQSLYEPIRYVLSIGGKRIRPTLALLAYNLFKDDPESILAPACGLETYHNYTLLHDD- 80
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE 183
L D +L + PT++ + NT +L D+ML +L+A D S ++ VM
Sbjct: 81 -LMDNAAL-RRGMPTVHKRWDANTAILSGDSMLVLAYQLVAQCD------SSKLKPVMEL 132
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAI 243
T G EGQ Q D D N +T+ E E + K L ACG GA+
Sbjct: 133 FTETALEIG--EGQ-------QYDMDFEHRNDVTEDEYI-EMIRLKTSVLLACGMKMGAL 182
Query: 244 LGGGSEKEIELLRRYGFYVGM 264
L +++ +LL ++G +G+
Sbjct: 183 LADAPQQDADLLYKFGEQIGL 203
>gi|344338436|ref|ZP_08769368.1| Farnesyltranstransferase [Thiocapsa marina 5811]
gi|343801718|gb|EGV19660.1| Farnesyltranstransferase [Thiocapsa marina 5811]
Length = 288
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 6/158 (3%)
Query: 47 TSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHR-EQAIV 105
T + + + A L P + E +RH VF + P LC+A G E A
Sbjct: 5 TRIEQALAAALESVTTSSCPPRLAEAVRHAVFPGGARVRPRLCLAVAAACGSRDVEAADA 64
Query: 106 AAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLAS 165
A A++ ++H AS +H++LP D + L + P+++ A+ +L DA++ E LA
Sbjct: 65 AGASIELLHCASLVHDDLPCFDDSPLR-RGLPSVHRAYGEPLAVLAGDALIVLAFENLAR 123
Query: 166 SDNPAGNNSGRILRVMVEMTRAMG-SQGVVEGQYNELQ 202
GNN R+ +++ ++RA+G G+V GQ E +
Sbjct: 124 V---LGNNPERLAPLLMTVSRAVGMPTGIVAGQAWECE 158
>gi|283797528|ref|ZP_06346681.1| geranyltranstransferase [Clostridium sp. M62/1]
gi|291074897|gb|EFE12261.1| polyprenyl synthetase [Clostridium sp. M62/1]
Length = 298
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 18/201 (8%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
++E M + V A + P L L GG ++ AA+ ++H +S IH++LP D
Sbjct: 32 IFEAMNYSVRAGGKRLRPLLMREVYRLFGGQGKEVEPFMAAIEMIHTSSLIHDDLPCMDN 91
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE-----LLASSDNPAGNNSGRILRVMVE 183
+ K T + A+ + +L DA+L + +E L+ +D GR + ++ E
Sbjct: 92 DEY-RRGKKTTWVAYGYDMAVLAGDALLIYAVETASRAFLSGADPVMAGRIGRCIHILSE 150
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAI 243
T G G++ GQ +++ + KL+ I Y+ K G L GA+
Sbjct: 151 KT---GIYGMIGGQTVDVELTNKPVPREKLDFI---------YRLKTGALLEASMMIGAV 198
Query: 244 LGGGSEKEIELLRRYGFYVGM 264
L G S++E++ + + VGM
Sbjct: 199 LAGASKEELDTVEKIAANVGM 219
>gi|334137118|ref|ZP_08510563.1| geranyltranstransferase [Paenibacillus sp. HGF7]
gi|333605316|gb|EGL16685.1| geranyltranstransferase [Paenibacillus sp. HGF7]
Length = 300
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 112/251 (44%), Gaps = 13/251 (5%)
Query: 36 MSTPNKNKSYWTSVHEDIGAHLRQAV--VVKEPVEVYEPMRHFVFAAPVNMAPALCVAAC 93
M+T + Y S +++ LR+ + P + + ++ + A + P L +AA
Sbjct: 1 MNTDMNIQEYIASYAKEVEGELRELFPRLWDIPDVLRQSAQYSIDAGGKRLRPILVLAAA 60
Query: 94 ELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVAD 153
E +GG +E A+ A A+ ++H S IH++LP D + K T + + +L D
Sbjct: 61 EALGGRKEAAMPVACAIEMVHTYSLIHDDLPAMDNDDY-RRGKLTNHKVYGEAMAILAGD 119
Query: 154 AMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKL 213
A+L AS G + ++L ++ E+ G++G+V GQ +++ Q
Sbjct: 120 ALLTQAF-YSASQARRHGVPAEQVLNIVEELAEYSGARGMVGGQVADMKGEQ-------- 170
Query: 214 NGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRL 273
GIT++ ++ K L G + G +K++E L +G +G+ I L
Sbjct: 171 -GITELSGLEYIHQHKTSDLIIFSLRAGGRIAGADDKQLEALTAFGRSIGLAFQIQDDIL 229
Query: 274 GPTEEIEELKK 284
T E+L K
Sbjct: 230 DVTGTQEKLGK 240
>gi|429757194|ref|ZP_19289742.1| polyprenyl synthetase [Capnocytophaga sp. oral taxon 324 str.
F0483]
gi|429169231|gb|EKY11001.1| polyprenyl synthetase [Capnocytophaga sp. oral taxon 324 str.
F0483]
Length = 321
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 56 HLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHA 115
H+ + KEP+ +YEP+++ + + P L + A ++ G +A+ AA A+ V H
Sbjct: 14 HIEKIFTPKEPIHLYEPIQYILNLGGKRIRPILTLIATDIFGKDYRKALNAATAIEVFHN 73
Query: 116 ASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSG 175
S IH++ + D SL + KPT++ + N +L DAML +LL D P+
Sbjct: 74 FSLIHDD--IMDNASL-RRGKPTVHQKWDTNVGILSGDAMLIIAYKLL--EDYPS----- 123
Query: 176 RILRVMVEMTRAMGSQG--VVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRL 233
++ E+ + + V EGQ Q D D KL ++ +E + K L
Sbjct: 124 ---KIFQELVKTLSETALKVCEGQ-------QMDMDFEKLQEVS-IEAYMQMISYKTSVL 172
Query: 234 HACGAACGAILGGGSEKEIELLRRYGFYVGM 264
G+I+ +++ + +G +G+
Sbjct: 173 IGAALQMGSIISETTKENQINMYNFGLNLGI 203
>gi|325569748|ref|ZP_08145772.1| geranyltranstransferase [Enterococcus casseliflavus ATCC 12755]
gi|420262480|ref|ZP_14765121.1| geranyltranstransferase [Enterococcus sp. C1]
gi|325157053|gb|EGC69219.1| geranyltranstransferase [Enterococcus casseliflavus ATCC 12755]
gi|394770237|gb|EJF50041.1| geranyltranstransferase [Enterococcus sp. C1]
Length = 298
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 89/208 (42%), Gaps = 31/208 (14%)
Query: 78 FAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKP 137
F PVN A C AA E+V H S IH++LP D L + KP
Sbjct: 59 FHKPVNTAVYQCAAALEMV-----------------HTYSLIHDDLPAMDNDDL-RRGKP 100
Query: 138 TMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQ 197
T + F +L D +L +L+A ++ A + ++ ++++A G+QG+V GQ
Sbjct: 101 TNHKVFGEALAILAGDGLLTAAFQLVAMAEIEANQK----VLLLQQLSKAAGTQGMVAGQ 156
Query: 198 YNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRR 257
++Q N +E +++K G L G +L +E+ + L R
Sbjct: 157 AADIQGE---------NQALSLEELMSIHERKTGELIRFAVIAGGVLADQTEEVLHELDR 207
Query: 258 YGFYVGMIQGIVSRRLGPTEEIEELKKL 285
+ ++G+ I L T EEL K+
Sbjct: 208 FAQHIGLAFQIRDDLLDATSTTEELGKV 235
>gi|241894940|ref|ZP_04782236.1| geranyltranstransferase [Weissella paramesenteroides ATCC 33313]
gi|241871658|gb|EER75409.1| geranyltranstransferase [Weissella paramesenteroides ATCC 33313]
Length = 290
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 88/197 (44%), Gaps = 11/197 (5%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
E+ E MR+ V A + P L +A + G + + A+A+ ++H S IH++LP D
Sbjct: 30 ELQEAMRYAVMAGGKRLRPMLSLAVIQTYGLPVNEYLKVASAIELIHTYSLIHDDLPAMD 89
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
L + KPT + AF +T +L DA+ P E L D P N++ R+ V+ A
Sbjct: 90 DDEL-RRGKPTTHRAFGEDTAILAGDALQPLAFEWLTDLDQPL-NDAQRVQLVIAMAQAA 147
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G+ V D + K + +T E T + K G L A GAI+
Sbjct: 148 GGAGMVA--------GQVLDIEAMKTSAVTLAE-TQAIHYHKTGALIAYALQAGAIMANA 198
Query: 248 SEKEIELLRRYGFYVGM 264
+E +L +G G+
Sbjct: 199 NEDIQNILHDFGMAYGL 215
>gi|117618681|ref|YP_857809.1| geranyltranstransferase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117560088|gb|ABK37036.1| geranyltranstransferase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 296
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 12/195 (6%)
Query: 71 EPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTS 130
+ MR+ + + P L A E++G E AAA+ +HA S +H++LP D
Sbjct: 34 DAMRYGLLLGGKRVRPFLVYAVGEMLGVKNELLDGPAAAVECIHAYSLLHDDLPAMDNDD 93
Query: 131 LIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGS 190
L + +PT++ AF T +L DA+ +LA P + R+ R++ + RA G
Sbjct: 94 L-RRGQPTVHKAFDEGTAILAGDALQTLAFTILADHPMPDSLLANRV-RMLSRLARASGY 151
Query: 191 QGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG-SE 249
G+ GQ +LQ + R+++ I ++E + ++ K G L C A GA+ E
Sbjct: 152 LGMCGGQALDLQA-----EGRQIS-IAELE---QVHRHKTGALIECAVALGALCKADVDE 202
Query: 250 KEIELLRRYGFYVGM 264
+ L+ Y +G+
Sbjct: 203 TTLSALQTYAAAIGL 217
>gi|430809186|ref|ZP_19436301.1| geranyltranstransferase [Cupriavidus sp. HMR-1]
gi|429498330|gb|EKZ96840.1| geranyltranstransferase [Cupriavidus sp. HMR-1]
Length = 294
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 107/233 (45%), Gaps = 17/233 (7%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++E MR+ V + P L AA E+VG E AA A+ ++HA S +H+++P
Sbjct: 30 PHTLHEAMRYAVLGGGKRVRPLLVHAAGEVVGATPEACDAAACAVEMIHAYSLVHDDMPC 89
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D L + +PT++ A+ T LLV DA+ +LA + PA R L+V+ E+
Sbjct: 90 MDDDDL-RRGRPTVHKAYDEATALLVGDALQSQAFIVLAQT--PALAAEAR-LKVVAELA 145
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
A GS G+ GQ +LQ L G+ ++ K G L GA+ G
Sbjct: 146 VASGSVGMCGGQAIDLQNVGKAMTREALEGM---------HRMKTGALLRASVRMGALCG 196
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVNSFNDE 298
+ + L RY VG+ +V L T + L K A K ++ ND+
Sbjct: 197 NIDQAGLVALDRYAAAVGLAFQVVDDILDVTADTATLGKTAGK----DAANDK 245
>gi|295116024|emb|CBL36871.1| Geranylgeranyl pyrophosphate synthase [butyrate-producing bacterium
SM4/1]
Length = 298
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 18/201 (8%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
++E M + V A + P L L GG ++ AA+ ++H +S IH++LP D
Sbjct: 32 IFEAMNYSVRAGGKRLRPLLMREVYRLFGGQGKEVEPFMAAIEMIHTSSLIHDDLPCMDN 91
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE-----LLASSDNPAGNNSGRILRVMVE 183
+ K T + A+ + +L DA+L + +E L+ +D GR + ++ E
Sbjct: 92 DEY-RRGKKTTWVAYGYDMAVLAGDALLIYAVETASRAFLSGADPVMAGRIGRCIHILSE 150
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAI 243
T G G++ GQ +++ + KL+ I Y+ K G L GA+
Sbjct: 151 KT---GIYGMIGGQTVDVELTNKPVPREKLDFI---------YRLKTGALLEASMMIGAV 198
Query: 244 LGGGSEKEIELLRRYGFYVGM 264
L G S++E++ + + VGM
Sbjct: 199 LAGASKEELDTVEKIAANVGM 219
>gi|395785113|ref|ZP_10464847.1| hypothetical protein ME5_00165 [Bartonella tamiae Th239]
gi|423717986|ref|ZP_17692176.1| hypothetical protein MEG_01716 [Bartonella tamiae Th307]
gi|395425625|gb|EJF91786.1| hypothetical protein ME5_00165 [Bartonella tamiae Th239]
gi|395426419|gb|EJF92546.1| hypothetical protein MEG_01716 [Bartonella tamiae Th307]
Length = 300
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 12/226 (5%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + MRH V + P L + L + + A+ AAAL +H S IH++
Sbjct: 32 IHRPESLLAAMRHGVLNGGKRLRPFLVMQTAALFDANPQAALRVAAALECVHCYSLIHDD 91
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D L + +PT++ AF T +L DA+L +++A D + LR++
Sbjct: 92 LPAMDDDDL-RRGQPTVHKAFDEATAILAGDALLTMSFDMIA--DEALELKAETKLRLIS 148
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+ R+ G G+V GQ +LQ ++ TD+ +T + K G L G GA
Sbjct: 149 GLARSAGLGGMVGGQVLDLQSEHVTVEE------TDI-ITLQAMKT--GALIRYGCEAGA 199
Query: 243 ILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
++G + ++ E L +G +G+ + L T + L K A K
Sbjct: 200 LIGNATREDYERLSEFGAAIGLAFQLADDLLDVTSDTVSLGKTAGK 245
>gi|225174881|ref|ZP_03728878.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
gi|225169521|gb|EEG78318.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
Length = 293
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 11/219 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P E++ +R+ VFA + P L +AA E+ G R A+ AA A+ ++H S IH++LP
Sbjct: 27 PQEIHRAVRYSVFAGGKRLRPLLTLAAAEIFGVPRLHALPAACAIEMVHTYSLIHDDLPA 86
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
+ + + + F +L D++L E LA ++ A ++R+ +
Sbjct: 87 L-DDDDYRRGRLSNHKVFGDAMAILAGDSLLTLAFETLA-AEATAYFAPATVVRLTEALG 144
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
+A G G++ GQ +L + +++N T + Y ++ K G L C GAI+G
Sbjct: 145 KAAGMSGMIGGQVVDLLS-----EGKQVNAAT---LDY-IHRHKTGALFTCCIKSGAIMG 195
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
G S +E++ L + +G+ IV L T + L K
Sbjct: 196 GASLEEMQRLTVFAQNIGLAFQIVDDILDITGDEAALGK 234
>gi|150390268|ref|YP_001320317.1| polyprenyl synthetase [Alkaliphilus metalliredigens QYMF]
gi|149950130|gb|ABR48658.1| Polyprenyl synthetase [Alkaliphilus metalliredigens QYMF]
Length = 295
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 11/196 (5%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
V + MR+ +FA + P + +A L + E+ + A AL ++H S IH++LP D
Sbjct: 32 VIDAMRYSIFAGGKRLRPIVAIATYNLFKDNLEEVLPYACALEMIHTYSLIHDDLPAMDD 91
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
+ + K T + + +L DA+L + E++ S N + L+ + E+ +A
Sbjct: 92 DNY-RRGKLTNHKVYGEGIAILAGDALLNYAFEIMISHARTQSNANVH-LQAIEEIAKAA 149
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
G G++ GQ +L+ D LN I + K L GAI+ +
Sbjct: 150 GMNGMIGGQVVDLESENKQVDKNTLNYI---------HYNKTAALIISAFKVGAIIAEAT 200
Query: 249 EKEIELLRRYGFYVGM 264
E +I + G +G+
Sbjct: 201 ETDIAHMNSLGKNIGL 216
>gi|421838068|ref|ZP_16272058.1| geranyltranstransferase, partial [Clostridium botulinum
CFSAN001627]
gi|409739634|gb|EKN40262.1| geranyltranstransferase, partial [Clostridium botulinum
CFSAN001627]
Length = 262
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 13/196 (6%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
+YE M + + A + P L + L ++A+ AAA+ ++H S IH++LP D
Sbjct: 1 IYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDN 60
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
L + KPT + F +L DA+L + ++ + N + ++ + +A
Sbjct: 61 DDL-RRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEY---SLKNGEKAVKACYTIAKAA 116
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
G G++ GQ ++ +D+ + ++ Y +KK+ G L GAILG +
Sbjct: 117 GVDGMIGGQVVDILS-----EDKSI----PLDELYYMHKKRTGALIKASILAGAILGSAT 167
Query: 249 EKEIELLRRYGFYVGM 264
+IELL YG +G+
Sbjct: 168 YTDIELLGEYGDNLGL 183
>gi|375108094|ref|ZP_09754355.1| geranylgeranyl pyrophosphate synthase [Burkholderiales bacterium
JOSHI_001]
gi|374668825|gb|EHR73610.1| geranylgeranyl pyrophosphate synthase [Burkholderiales bacterium
JOSHI_001]
Length = 296
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 106/248 (42%), Gaps = 24/248 (9%)
Query: 52 DIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALH 111
D+ L + V P + MR+ V + P L +AACE V G A+ AA A+
Sbjct: 16 DVEGALERWVPEDTPAGLGVAMRYGVLDGGKRLRPLLVMAACEAVHGDPAAALRAAVAVE 75
Query: 112 VMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDN--P 169
++HA S +H+++P D ++ + KPT++ F +L DAM E+L D P
Sbjct: 76 LIHAYSLVHDDMPCMD-NDVLRRGKPTVHVKFGEAQAMLAGDAMQALAFEVLTPDDGAMP 134
Query: 170 AGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKK 229
+ R+ + RA G G+ GQ +L + D + +++K
Sbjct: 135 PAMQA----RLCALLARAAGHSGMAGGQAIDLA---------SIGKALDEGALRDMHRRK 181
Query: 230 EGRLHAC----GAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKL 285
G L GAACG + + L YG +G+ +V L T+E L K
Sbjct: 182 TGALLQASVLMGAACGPV----DAPAWKALSDYGAALGLAFQVVDDILDVTQESVTLGKT 237
Query: 286 AFKLREVN 293
A K ++ N
Sbjct: 238 AGKDQDAN 245
>gi|288869706|ref|ZP_05975848.2| short chain isoprenyl diphosphate synthase [Methanobrevibacter
smithii DSM 2374]
gi|288861214|gb|EFC93512.1| short chain isoprenyl diphosphate synthase [Methanobrevibacter
smithii DSM 2374]
Length = 335
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 107/237 (45%), Gaps = 22/237 (9%)
Query: 52 DIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALH 111
DI + + + P + E + A + PAL + E VGG R+ ++ +AAA+
Sbjct: 18 DISKTIEEELSCIVPNNLQEASIYLTKAGGKMLRPALTLITSEAVGGSRDNSLKSAAAIE 77
Query: 112 VMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAG 171
++H S IH+++ + + KP ++ + N +L D + E++ +SD P
Sbjct: 78 LIHTFSLIHDDIM---DDDDMRRGKPAVHKVWDENVAILAGDTLFSKAFEIIMNSD-PEK 133
Query: 172 NNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYK---- 227
N ++ + + T A + EGQ +++ +DR +++ E Y
Sbjct: 134 NTPAQLSQTLA--TVADACVKICEGQASDMSF-----EDR-------YDVSEEEYLDMIF 179
Query: 228 KKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
KK G L A + GAI+GG +++ I+ + YG +G+ I L + E L K
Sbjct: 180 KKTGALIAAASKAGAIMGGANQEVIDAMYDYGRLIGLAFQIQDDYLDLASDEETLGK 236
>gi|357388701|ref|YP_004903540.1| putative polyprenyl diphosphate synthase [Kitasatospora setae
KM-6054]
gi|311895176|dbj|BAJ27584.1| putative polyprenyl diphosphate synthase [Kitasatospora setae
KM-6054]
Length = 357
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 19/192 (9%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
PAL + + E VG + + + ++ ++H S +H++L D T + + T + F P
Sbjct: 69 PALALLSAEAVGANAQVGVPGGVSVELVHNFSLLHDDLMDGDETR---RHRATAWTVFGP 125
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNN---SGRILRVMVEMTRAMGSQGVVEGQYNELQ 202
+L DA+ G E+L + G + + R +R++ TR + ++GQ ++
Sbjct: 126 AQAVLAGDALATLGTEVLLDAAVTGGADPVDAARAVRLITTATRRL-----IDGQALDVS 180
Query: 203 CSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYV 262
Q D VE K G L A AA GA+L G ++ + L+RYG+++
Sbjct: 181 FEQRD--------AVTVEECLAMEGGKTGALLAASAAIGAVLAGADDRVSDALQRYGYHL 232
Query: 263 GMIQGIVSRRLG 274
G+ V LG
Sbjct: 233 GLAFQAVDDLLG 244
>gi|90420298|ref|ZP_01228206.1| putative geranyltranstransferase [Aurantimonas manganoxydans
SI85-9A1]
gi|90335632|gb|EAS49382.1| putative geranyltranstransferase [Aurantimonas manganoxydans
SI85-9A1]
Length = 300
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 98/238 (41%), Gaps = 16/238 (6%)
Query: 54 GAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVM 113
GAH V P + MRH + P L + + L G + AI AA AL +
Sbjct: 27 GAH---GSVAGAPARLLAAMRHGALGGGKRLRPFLVIESARLFGADLQAAIGAATALECI 83
Query: 114 HAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNN 173
H S +H++LP D L + KPT++ A+ T +L D +L L+A + +
Sbjct: 84 HCYSLVHDDLPSMDDDDL-RRGKPTVHRAYDEATAILAGDGLLTLAFGLVAGEEGL--SP 140
Query: 174 SGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRL 233
R+ V + + R G+ G+V GQ +L N + + K G L
Sbjct: 141 KARVALVAL-LARDAGAAGMVGGQVLDLAAE---------NAVLSEDEIARMQAMKTGAL 190
Query: 234 HACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLRE 291
A GAI+ E LRR+G VG+ + L T + L K A K RE
Sbjct: 191 IAFACEAGAIVADAGAAERARLRRFGEIVGLAFQLADDLLDETADAAVLGKAAGKDRE 248
>gi|154244163|ref|YP_001415121.1| polyprenyl synthetase [Xanthobacter autotrophicus Py2]
gi|15553715|gb|AAL01997.1|AF408846_1 farnesyl diphosphate synthase [Xanthobacter autotrophicus Py2]
gi|154158248|gb|ABS65464.1| Polyprenyl synthetase [Xanthobacter autotrophicus Py2]
Length = 308
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 100/228 (43%), Gaps = 23/228 (10%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P + MRH + P L + + L G +QA+ AA A+ +H S +H++LP
Sbjct: 36 PERLMAAMRHGALGGGKRLRPFLVIESAALFGIPADQAVTAATAIECIHCYSLVHDDLPA 95
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD---NPAGNNSGRILRVMV 182
D L + +PT++ AF T +L D +L +LLA D +PA +R+ +
Sbjct: 96 MDDDDL-RRGRPTVHRAFDEATAILAGDGLLTLAFDLLAGEDAHPDPA-------VRIAL 147
Query: 183 --EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKK----KEGRLHAC 236
+ RA G G+V GQ +L + + +G T + + + + K G L A
Sbjct: 148 VRALARASGIGGMVGGQMLDLAA------EGRFSGGTPLALAEDAIRDLQAMKTGALLAV 201
Query: 237 GAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
GA+LGG + E L YG +G I L EE+ K
Sbjct: 202 SVEAGALLGGATADERAALLAYGRALGAAFQIADDILDVEGTAEEVGK 249
>gi|240851259|ref|YP_002972662.1| geranyltranstransferase [Bartonella grahamii as4aup]
gi|240268382|gb|ACS51970.1| geranyltranstransferase [Bartonella grahamii as4aup]
Length = 300
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 110/227 (48%), Gaps = 14/227 (6%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + + MR+ V + P L + + L E ++ A AL +H S IH++
Sbjct: 32 ISRPKNLIKAMRYGVLNGGKRLRPFLVIQSAALFDIPVEYSLDVACALECIHCYSLIHDD 91
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRI-LRVM 181
LP D ++ + KPT++ AF T +L +A+L F E++A + A S I ++++
Sbjct: 92 LPAMDN-DILRRGKPTVHIAFDEATAILAGNALLTFAFEIIA---HKASTLSTDIRIKLI 147
Query: 182 VEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACG 241
+ ++ G G++ GQ +L+ ++K G +D+ +T + K AC A G
Sbjct: 148 TSLAQSAGLGGMLGGQMLDLEA------EKKPQGSSDI-ITLQHMKTAALISFACQA--G 198
Query: 242 AILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
AI+G S++ E L +G Y+G+ + L T + L K A K
Sbjct: 199 AIIGNASKELTEKLTDFGTYLGLAFQLTDDLLDVTANTQTLGKTAGK 245
>gi|148643503|ref|YP_001274016.1| bifunctional short chain isoprenyl diphosphate synthase, IdsA
[Methanobrevibacter smithii ATCC 35061]
gi|148552520|gb|ABQ87648.1| bifunctional short chain isoprenyl diphosphate synthase, IdsA
[Methanobrevibacter smithii ATCC 35061]
Length = 330
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 107/237 (45%), Gaps = 22/237 (9%)
Query: 52 DIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALH 111
DI + + + P + E + A + PAL + E VGG R+ ++ +AAA+
Sbjct: 13 DISKTIEEELSCIVPNNLQEASIYLTKAGGKMLRPALTLITSEAVGGSRDNSLKSAAAIE 72
Query: 112 VMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAG 171
++H S IH+++ + + KP ++ + N +L D + E++ +SD P
Sbjct: 73 LIHTFSLIHDDIM---DDDDMRRGKPAVHKVWDENVAILAGDTLFSKAFEIIMNSD-PEK 128
Query: 172 NNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYK---- 227
N ++ + + T A + EGQ +++ +DR +++ E Y
Sbjct: 129 NTPTQLSQTLA--TVADACVKICEGQASDMSF-----EDR-------YDVSEEEYLDMIF 174
Query: 228 KKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
KK G L A + GAI+GG +++ I+ + YG +G+ I L + E L K
Sbjct: 175 KKTGALIAAASKAGAIMGGANQEVIDAMYDYGRLIGLAFQIQDDYLDLASDEETLGK 231
>gi|332653017|ref|ZP_08418762.1| geranyltranstransferase [Ruminococcaceae bacterium D16]
gi|332518163|gb|EGJ47766.1| geranyltranstransferase [Ruminococcaceae bacterium D16]
Length = 293
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 116/257 (45%), Gaps = 21/257 (8%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
++ E M + + A + P L + +C + GG E A+ A A+ ++H S IH++LP D
Sbjct: 33 DLREAMEYSLMAGGKRIRPVLVLESCRMCGGDPEVALPFACAVEMIHTYSLIHDDLPAMD 92
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
L + +PT + + T +L D +L + L A + +++ + ++ A
Sbjct: 93 DDEL-RRGRPTNHMVYGEATAILAGDGLLTAAFQTL----TQAQLTAQQVVDAVACLSLA 147
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G G+V GQ ++ + R L T E+ + K G L A A G I GG
Sbjct: 148 AGPDGMVGGQALDMA-----GEGRSL---TRAELE-QLQSLKTGALIAAAAELGCIAAGG 198
Query: 248 SEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK--LAFKLREVNSFN-----DENA 300
S ++ E +R+Y +G + L T EEL K + + +E N+F D +
Sbjct: 199 SPEQRESVRQYAQCLGRAFQVQDDILDVTSTDEELGKPTGSDREKEKNTFVSLLGLDRSR 258
Query: 301 EVIFSLVDDNITHVLGF 317
E++ L ++ + GF
Sbjct: 259 ELVAELTAQAVSALDGF 275
>gi|52549424|gb|AAU83273.1| bifunctional short chain isoprenyl diphosphate synthase [uncultured
archaeon GZfos27B6]
Length = 360
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 26/236 (11%)
Query: 27 YRPMMVTMAMSTPNKNKSY------WTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAA 80
YR +VT M + N++ + ++ ED ++ + + P +Y+P+ +
Sbjct: 5 YRINIVTREMKSHNRSSELGSIGGAYAAIFEDA---YKRNLEGRGPDTLYKPIIDLLGRG 61
Query: 81 PVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMY 140
+ P+LC+ ACELVGG ++A+ A + H S H+++ + S + + +P ++
Sbjct: 62 GKRLRPSLCLMACELVGGEIKKALPTAICIEFFHNFSLAHDDI---EDDSKLRRGEPALH 118
Query: 141 HAFKPNTELLVADAMLPFGLELLASSDNPAG-NNSGRILRVMVEMTRAMGSQGVVEGQYN 199
+ + D + E L ++ N G + +I + E+ + EGQ
Sbjct: 119 VKYGIPIAVNAGDGLYALSYEALKANRNLLGLERAWKIFEEIAELCVVLS-----EGQAM 173
Query: 200 ELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELL 255
+L+ + RK G +V ET +KK +L A CGAI GG S + E L
Sbjct: 174 DLEFKE-----RKEMGELEV---IETLRKKTAKLFGVSAKCGAIAGGASHETAEDL 221
>gi|160915116|ref|ZP_02077329.1| hypothetical protein EUBDOL_01124 [Eubacterium dolichum DSM 3991]
gi|158432915|gb|EDP11204.1| polyprenyl synthetase [Eubacterium dolichum DSM 3991]
Length = 280
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 16/218 (7%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
+V E M + + A + P L +A + G E+ AAA+ ++H S IH++LP D
Sbjct: 19 KVKEAMLYSLLAGGKRIRPQLLFSALKAYGIAEEKGFPCAAAIEMIHTYSLIHDDLPAMD 78
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
+L + +PT + F T +L DA+L + SD A +++ + ++
Sbjct: 79 DDTL-RRGRPTCHIQFDEATAILAGDALLTQAFHEVLKSDATA----SQLVSLESLISSY 133
Query: 188 MGSQGVVEGQYNELQCS-QCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGG 246
G+ G+V GQ +L+ +CD +E ++ K G+L C A+L
Sbjct: 134 SGANGMVLGQIYDLEAEGRCD---------VSIEALQRVHEYKTGKLITLPLLCAAVL-A 183
Query: 247 GSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
E++ E+ + G+ +G+ I T EEL K
Sbjct: 184 NHEEDFEVWKSIGYAMGLSFQIQDDVFDVTSTCEELGK 221
>gi|393772462|ref|ZP_10360908.1| geranyltranstransferase [Novosphingobium sp. Rr 2-17]
gi|392722143|gb|EIZ79562.1| geranyltranstransferase [Novosphingobium sp. Rr 2-17]
Length = 302
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 14/197 (7%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
+ E MR+ + P L + EL G RE AI A+ A+ +H S IH++LP D
Sbjct: 40 LIEAMRYAAIGGGKRLRPLLLASVAELYGVQREAAIRASVAIEAIHVYSLIHDDLPCMDD 99
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE-MTRA 187
++ KPT++ A+ T +L D++ F E+LA +PA + +V+ + A
Sbjct: 100 DAM-RHGKPTLHIAYDEATAVLAGDSLHAFAFEVLA---DPATSADPFTRIELVQCLGHA 155
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G+QG+ GQ +L + D++ + K G L GAILG
Sbjct: 156 SGAQGMAGGQMMDLVAETSE---------FDLQTVTRLQQLKTGALLCAAVEMGAILGKV 206
Query: 248 SEKEIELLRRYGFYVGM 264
+ LR Y +G+
Sbjct: 207 QPEGRTHLRGYARDIGL 223
>gi|167750990|ref|ZP_02423117.1| hypothetical protein EUBSIR_01975 [Eubacterium siraeum DSM 15702]
gi|167656169|gb|EDS00299.1| polyprenyl synthetase [Eubacterium siraeum DSM 15702]
Length = 302
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 90/216 (41%), Gaps = 18/216 (8%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
+Y+ + + A + P L C + GG A+ AA A+ ++H S IH++LP D
Sbjct: 47 LYDAASYSLEAGGKRIRPVLAFEMCRVCGGDINDAVPAAVAVEMIHTFSLIHDDLPCMDN 106
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
+ + +P+ + A LL DA+ + + + SD A + I +
Sbjct: 107 DDM-RRGRPSCHKAHGEAVALLAGDALSAYAGKYICDSDLSAEKKTAMIKELYDR----- 160
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
+ G++EGQ D D K + + + YE K L + G I G
Sbjct: 161 -TLGMIEGQTI--------DTDGKFDTLDGLLSMYEM---KTSELLTAASVMGCIAAGAD 208
Query: 249 EKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
E++I R Y VG+ IV L T +EEL K
Sbjct: 209 EEKISAARAYAHDVGLAFQIVDDILDVTSTVEELGK 244
>gi|330826310|ref|YP_004389613.1| polyprenyl synthetase [Alicycliphilus denitrificans K601]
gi|329311682|gb|AEB86097.1| Polyprenyl synthetase [Alicycliphilus denitrificans K601]
Length = 297
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 104/254 (40%), Gaps = 14/254 (5%)
Query: 36 MSTPNKNKSYWTSVH-EDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACE 94
M T + + + W + A L V P + MR+ V + P L +AACE
Sbjct: 1 MPTSDYDFARWMRGQLAQVEAGLSLWVRADAPAGLGAAMRYAVLDGGKRLRPLLVLAACE 60
Query: 95 LVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADA 154
VGG + A+ AA A+ ++HA S +H+++P D ++ + KPT++ F LL DA
Sbjct: 61 AVGGLGQAALRAACAVELIHAYSLVHDDMPCMD-NDVLRRGKPTVHVRFGQAQALLAGDA 119
Query: 155 MLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLN 214
+ ELL D R+ R++ + A G G + D R +
Sbjct: 120 LQALAFELLTPEDGVPPAMQARLCRLLAQAAGADGMAGGQAIDLASVGQQLTQDQLRHM- 178
Query: 215 GITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLG 274
++ K G L GA G + + L +YG +G+ +V L
Sbjct: 179 -----------HRLKTGALLRASVVMGAACGEPARVAEQALAQYGAAIGLAFQVVDDVLD 227
Query: 275 PTEEIEELKKLAFK 288
T++ L K A K
Sbjct: 228 VTQDSATLGKTAGK 241
>gi|259503553|ref|ZP_05746455.1| geranyltranstransferase [Lactobacillus antri DSM 16041]
gi|259168466|gb|EEW52961.1| geranyltranstransferase [Lactobacillus antri DSM 16041]
Length = 291
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 73 MRHFVFAAPVNMAPALCVAACELVGGHREQAIV-AAAALHVMHAASFIHENLPLSDRTSL 131
MR+ A + P L +A E++GG + ++ AA AL ++H S IH++LP D L
Sbjct: 33 MRYSTMAGGKRLRPTLTLATVEILGGQLDADVMRAATALELLHTYSLIHDDLPAMDNDDL 92
Query: 132 IPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQ 191
+ PT + F L D +L + + + PA S R+ +E+ +A G
Sbjct: 93 -RRGAPTNHRKFGAGMATLAGDGLLTLAFQWVTDNHLPAAVKS----RLALELAKAAGPA 147
Query: 192 GVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKE 251
G+V GQ +++ + ++L+ ++ +++K G L G I+ EK
Sbjct: 148 GMVAGQARDIEGT-----GQQLS----LDQLRYLHRQKTGALLRYAVLAGGIITAQPEKV 198
Query: 252 IELLRRYGFYVGM 264
LL ++G G+
Sbjct: 199 QRLLAQFGASYGL 211
>gi|222110169|ref|YP_002552433.1| polyprenyl synthetase [Acidovorax ebreus TPSY]
gi|221729613|gb|ACM32433.1| Polyprenyl synthetase [Acidovorax ebreus TPSY]
Length = 306
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 109/262 (41%), Gaps = 21/262 (8%)
Query: 32 VTMAMS-TPNKNKSYWTSVH----EDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAP 86
VT AMS P + W ED +H V P + E MR+ V + P
Sbjct: 5 VTPAMSAVPVFDFDGWMRAQLARVEDALSHW---VCPDAPAGLGEAMRYAVLDGGKRLRP 61
Query: 87 ALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPN 146
L +AACE VGG+ + A+ AA A+ ++HA S +H+++P D ++ + KPT++ F
Sbjct: 62 LLVLAACEAVGGNAQAALRAACAVELIHAYSLVHDDMPCMD-NDVMRRGKPTVHVPFGEA 120
Query: 147 TELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQC 206
LL DA+ ELL D R+ R + A G G +
Sbjct: 121 RALLAGDALQALAFELLTPEDGVPPAMQARLCRELARAAGADGMAGGQAIDLASVGLQLS 180
Query: 207 DDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQ 266
+D R++ ++ K G L GA+ G E + L YG +G+
Sbjct: 181 EDQLRQM------------HRLKTGALLQASVVMGAVCGQTPEGTLRALSDYGAAMGLAF 228
Query: 267 GIVSRRLGPTEEIEELKKLAFK 288
+V L T++ L K A K
Sbjct: 229 QVVDDVLDVTQDSATLGKTAGK 250
>gi|27363789|ref|NP_759317.1| Octaprenyl-diphosphate synthase [Vibrio vulnificus CMCP6]
gi|27359906|gb|AAO08844.1| Octaprenyl-diphosphate synthase [Vibrio vulnificus CMCP6]
Length = 298
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 98/228 (42%), Gaps = 16/228 (7%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
+ + MR+ + P L A E++G +EQ A+A+ +HA S IH++LP D
Sbjct: 34 LIQAMRYGLVLGGKRARPFLVYATGEMLGCSQEQLDTPASAIECIHAYSLIHDDLPAMDD 93
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
L + +PT + F T +L DA+ +LA A + R+ + + +A
Sbjct: 94 DEL-RRGQPTCHVKFDEATAILTGDALQTLAFTILAEGTLSADGETQRVAMIQA-LAQAS 151
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
G+QG+ GQ +L N +E E ++ K G L C GA+ G
Sbjct: 152 GAQGMCIGQALDLAAE---------NRAVTLEELEEIHRNKTGALIRCAVRLGALAAG-- 200
Query: 249 EKEIEL---LRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVN 293
EK + + L +Y +G+ + L + E L K +E+N
Sbjct: 201 EKGLAILPQLEKYSTAIGLAFQVQDDILDIISDTETLGKPQGSDQELN 248
>gi|365895658|ref|ZP_09433761.1| putative Geranyltranstransferase (Farnesyl-diphosphate synthase)
(FPP synthase) [Bradyrhizobium sp. STM 3843]
gi|365423584|emb|CCE06303.1| putative Geranyltranstransferase (Farnesyl-diphosphate synthase)
(FPP synthase) [Bradyrhizobium sp. STM 3843]
Length = 307
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 12/202 (5%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + E MR+ + P L V + + G A++A AAL +H S IH++
Sbjct: 37 IVRPKRLIESMRYSSLNGGKRLRPFLVVESAAIFGVPPTGALLAGAALECIHCYSLIHDD 96
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD-NPAGNNSGRILRVM 181
LP D + L + +PT++ + T +L DA+L +++ + +P ++G L +
Sbjct: 97 LPAMDNSDL-RRGRPTLHKVYDDATAILAGDALLTIAFDIITRDEIHP---DAGVRLALT 152
Query: 182 VEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACG 241
+ R G G+ GQ +L + DR+ + V+ + K G L G G
Sbjct: 153 RALARCAGIGGMAGGQILDL-AGEGRFGDREPVDVARVQ------QMKTGALLRFGCIAG 205
Query: 242 AILGGGSEKEIELLRRYGFYVG 263
AILG S KE + L +G +G
Sbjct: 206 AILGQASAKEYQALDDFGRALG 227
>gi|70732810|ref|YP_262577.1| geranyltranstransferase [Pseudomonas protegens Pf-5]
gi|68347109|gb|AAY94715.1| geranyltranstransferase [Pseudomonas protegens Pf-5]
Length = 295
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 98/205 (47%), Gaps = 20/205 (9%)
Query: 65 EPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLP 124
E +YE MR+ V + P L AACE +GG EQA AA A+ ++HA S +H++LP
Sbjct: 27 ELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGKPEQANGAACAVELIHAYSLVHDDLP 86
Query: 125 LSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASS---DNPAGNNSGRI-LRV 180
D L + +PT + AF +L D GL+ LA S D + S I LR+
Sbjct: 87 AMDDDDL-RRGQPTTHKAFDEACAILAGD-----GLQSLAFSALLDPALSDASAEIRLRM 140
Query: 181 MVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAAC 240
+ + +A G G+V GQ +L D + L + ++ K G L
Sbjct: 141 VTTLAQAAGPAGMVGGQAIDLGSVGLKLDQQALEYM---------HRHKTGALIEASVIL 191
Query: 241 GAILGGGSEK-EIELLRRYGFYVGM 264
GA+ G +EK E++ L+ Y +G+
Sbjct: 192 GALASGRAEKGELKALQTYAQAIGL 216
>gi|441504643|ref|ZP_20986636.1| Octaprenyl-diphosphate synthase [Photobacterium sp. AK15]
gi|441427742|gb|ELR65211.1| Octaprenyl-diphosphate synthase [Photobacterium sp. AK15]
Length = 303
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 92/213 (43%), Gaps = 12/213 (5%)
Query: 73 MRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLI 132
M+H P L A E++G E+ AAA+ +HA S IH++LP D +L
Sbjct: 43 MKHGTLLGGKRARPFLTYATGEMLGASSEELDTPAAAVECIHAYSLIHDDLPAMDDDNL- 101
Query: 133 PKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQG 192
+ +PT + AF T +L D++ E+LAS R+ +++ E+ +A GS G
Sbjct: 102 RRGQPTCHIAFDEATAILAGDSLQTLAFEILASGPLSEHGEKYRV-KMIAELAQASGSAG 160
Query: 193 VVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAI-LGGGSEKE 251
+ GQ +L+ +E +K K G L C GA+ +G
Sbjct: 161 MCMGQALDLEAE---------GKQVSLEQLENIHKHKTGALIRCAIRLGALAVGDKGVTV 211
Query: 252 IELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
+ L +Y +G+ + L T + E L K
Sbjct: 212 LPQLNQYADAIGLAFQVQDDILDVTSDTETLGK 244
>gi|338707402|ref|YP_004661603.1| polyprenyl synthetase [Zymomonas mobilis subsp. pomaceae ATCC
29192]
gi|336294206|gb|AEI37313.1| Polyprenyl synthetase [Zymomonas mobilis subsp. pomaceae ATCC
29192]
Length = 300
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 105/235 (44%), Gaps = 20/235 (8%)
Query: 36 MSTPNKNKSYWTSVHEDIGAHL-RQAVVVKEP-VEVYEPMRHFVFAAPVNMAPALCVAAC 93
M T + K+ V +DI +Q + ++P + E MR+ + P L VA C
Sbjct: 1 MDTVHNLKTAMEQVAQDIDELFDKQLSIPEDPRTRLIEAMRYAAIGGGKRLRPLLVVATC 60
Query: 94 ELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVAD 153
L R+ A+ A+ +H S IH+++P D L + KPT++ AF + +L D
Sbjct: 61 ALFNVDRKAALRVGLAIECIHVYSLIHDDMPCMDNDDL-RRGKPTVHKAFDDASAVLSGD 119
Query: 154 AMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM----GSQGVVEGQYNELQCSQCDDD 209
A+ E+LA A N V +E+ +A+ G G+V GQ +L ++ +
Sbjct: 120 ALQALAFEILADEQIHADPN------VRLELVKALAIASGKDGMVGGQAIDL-AAETSAE 172
Query: 210 DRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
L IT ++ + K G L GAI+G ++ + L+ Y +G+
Sbjct: 173 PFDLPTITRLQ------QLKTGALFGFCLEAGAIMGRQNKDVRDRLKAYARDIGL 221
>gi|257865770|ref|ZP_05645423.1| geranyltranstransferase [Enterococcus casseliflavus EC30]
gi|257872105|ref|ZP_05651758.1| geranyltranstransferase [Enterococcus casseliflavus EC10]
gi|257799704|gb|EEV28756.1| geranyltranstransferase [Enterococcus casseliflavus EC30]
gi|257806269|gb|EEV35091.1| geranyltranstransferase [Enterococcus casseliflavus EC10]
Length = 295
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 15/218 (6%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVA-AAALHVMHAASFIHENLPLSD 127
++E M++ + A + P L A A+ AAAL ++H S IH++LP D
Sbjct: 29 LFESMQYSIQAGGKRIRPLLLAATVAAFHKPINTAVYQCAAALEMVHTYSLIHDDLPAMD 88
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
L + KPT + F +L D +L +L+A ++ A + ++ ++++A
Sbjct: 89 NDDL-RRGKPTNHKVFGEALAILAGDGLLTAAFQLVAMAEIEANQK----VLLLQQLSKA 143
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G+QG+V GQ ++Q N +E +++K G L G +L
Sbjct: 144 AGTQGMVAGQAADIQGE---------NQALRLEELMSIHERKTGELIRFAVIAGGVLADQ 194
Query: 248 SEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKL 285
+E+ + L R+ ++G+ I L T EEL K+
Sbjct: 195 TEEVLHELDRFAQHIGLAFQIRDDLLDATSTTEELGKV 232
>gi|307105633|gb|EFN53881.1| hypothetical protein CHLNCDRAFT_31906 [Chlorella variabilis]
Length = 304
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 11/165 (6%)
Query: 126 SDRTSLIP--KSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE 183
S R SL+ + KPT + + +L DA+L E +A G + R+L+V+VE
Sbjct: 93 SMRYSLLAGRRGKPTNHKVYGEEIAILAGDALLSLSFEYIARETR--GVAADRVLQVIVE 150
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAI 243
+ +A+GS+G+V GQ +++ + G+ ++ +E K L GAI
Sbjct: 151 VGKAVGSEGLVAGQAVDIKSEGAGES----VGLDTLQYIHE---HKTAVLLEAAVVSGAI 203
Query: 244 LGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
LGG +E +++ LR+Y +G+ +V L T EEL K A K
Sbjct: 204 LGGATEVDVDRLRKYSRSIGLAFQVVDDILDITATTEELGKTAGK 248
>gi|359683798|ref|ZP_09253799.1| geranyltranstransferase [Leptospira santarosai str. 2000030832]
gi|418747053|ref|ZP_13303364.1| polyprenyl synthetase [Leptospira santarosai str. CBC379]
gi|418752306|ref|ZP_13308573.1| polyprenyl synthetase [Leptospira santarosai str. MOR084]
gi|409967301|gb|EKO35131.1| polyprenyl synthetase [Leptospira santarosai str. MOR084]
gi|410792099|gb|EKR90043.1| polyprenyl synthetase [Leptospira santarosai str. CBC379]
Length = 313
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 7/201 (3%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
E++E M++ + A + P L +AA + +++ ++L +H S IH++LP D
Sbjct: 36 ELFEAMKYSLVAGGKRLRPVLVLAASGGLQSETRNSLLLGSSLECIHTYSLIHDDLPSMD 95
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRIL-RVMVEMTR 186
+ PT++ F +L DA+ F ++ G+N L R ++E+
Sbjct: 96 NDDF-RRGLPTLHRKFSEAIAILAGDALNSFAFYFISLV---QGDNDDYFLHRDLLEILH 151
Query: 187 -AMGSQGVVEGQYNELQCSQCDDDDRK-LNGITDVEMTYETYKKKEGRLHACGAACGAIL 244
G+ G+V GQ +LQ + + DR N VEM T++ K G L G L
Sbjct: 152 IGCGAPGMVSGQIYDLQMERENPKDRNSKNEQEKVEMVRLTHRLKTGALIKAALLLGNRL 211
Query: 245 GGGSEKEIELLRRYGFYVGMI 265
+K E L +YG +G++
Sbjct: 212 RKDWKKREEFLSKYGEDLGLL 232
>gi|121601917|ref|YP_988458.1| polyprenyl synthetase [Bartonella bacilliformis KC583]
gi|421760275|ref|ZP_16197094.1| polyprenyl synthetase [Bartonella bacilliformis INS]
gi|120614094|gb|ABM44695.1| polyprenyl synthetase [Bartonella bacilliformis KC583]
gi|411175992|gb|EKS46013.1| polyprenyl synthetase [Bartonella bacilliformis INS]
Length = 300
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 12/231 (5%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + + MR+ V + P + + L E A+ AL +H S IH++
Sbjct: 32 IARPELLLQAMRYGVLNGGKCLRPFFVIQSAALFDVPPEHALDVGVALECIHCYSLIHDD 91
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D ++ + KPT++ AF T +L +A+L F E++A + L ++
Sbjct: 92 LPAMD-NDILRRGKPTVHKAFDEATAILAGNALLTFAFEIIAHKACALLPQTR--LNLIT 148
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+ +A G G++ GQ +L+ + D K+ +T + K +C A GA
Sbjct: 149 ALAQAAGLGGMIGGQILDLEAEKKPQDRTKI-------LTLQRMKTAALISFSCQA--GA 199
Query: 243 ILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVN 293
I+G S + +G +G+ + L T E L K A K + N
Sbjct: 200 IMGNASASITQQFADFGTQIGLAFQLTDDLLDVTSSTEILGKTAGKDKAAN 250
>gi|222444999|ref|ZP_03607514.1| hypothetical protein METSMIALI_00615 [Methanobrevibacter smithii
DSM 2375]
gi|222434564|gb|EEE41729.1| polyprenyl synthetase [Methanobrevibacter smithii DSM 2375]
Length = 335
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 107/237 (45%), Gaps = 22/237 (9%)
Query: 52 DIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALH 111
DI + + + P + E + A + PAL + E VGG R+ ++ +AAA+
Sbjct: 18 DISKTIEEELSCIVPNNLQEASIYLTKAGGKMLRPALTLITSEAVGGSRDNSLKSAAAIE 77
Query: 112 VMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAG 171
++H S IH+++ + + KP ++ + N +L D + E++ +SD P
Sbjct: 78 LIHTFSLIHDDIM---DDDDMRRGKPAVHKVWDENVAILAGDTLFSKAFEIIMNSD-PEK 133
Query: 172 NNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYK---- 227
N ++ + + T A + EGQ +++ +DR +++ E Y
Sbjct: 134 NTPTQLSQTLA--TVADACVKICEGQASDMSF-----EDR-------YDVSEEEYLDMIF 179
Query: 228 KKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
KK G L A + GAI+GG +++ I+ + YG +G+ I L + E L K
Sbjct: 180 KKTGALIAAASKAGAIMGGANQEVIDAMYDYGRLIGLAFQIQDDYLDLASDEETLGK 236
>gi|319761830|ref|YP_004125767.1| polyprenyl synthetase [Alicycliphilus denitrificans BC]
gi|317116391|gb|ADU98879.1| Polyprenyl synthetase [Alicycliphilus denitrificans BC]
Length = 297
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 2/147 (1%)
Query: 36 MSTPNKNKSYWTSVH-EDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACE 94
M T + + + W + A L V P + MR+ V + P L +AACE
Sbjct: 1 MPTSDYDFARWMRGQLAQVEAGLSLWVRADAPAGLGAAMRYAVLDGGKRLRPLLVLAACE 60
Query: 95 LVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADA 154
VGG + A+ AA A+ ++HA S +H+++P D ++ + KPT++ F LL DA
Sbjct: 61 AVGGLGQAALRAACAVELIHAYSLVHDDMPCMD-NDVLRRGKPTVHVRFGQAQALLAGDA 119
Query: 155 MLPFGLELLASSDNPAGNNSGRILRVM 181
+ ELL D R+ R++
Sbjct: 120 LQALAFELLTPEDGVPPAMQARLCRLL 146
>gi|319943220|ref|ZP_08017503.1| geranyltranstransferase [Lautropia mirabilis ATCC 51599]
gi|319743762|gb|EFV96166.1| geranyltranstransferase [Lautropia mirabilis ATCC 51599]
Length = 322
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 13/226 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++E MR+ V + P L AA ELVG AA A+ ++H S +H+++P
Sbjct: 52 PDRLHEAMRYAVLGGGKRVRPLLVYAAGELVGADARVLDGAACAVELIHVYSLVHDDMPA 111
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRI--LRVMVE 183
D + + KPT++ + +LV DA+ E+L + A + R+ ++
Sbjct: 112 MDNDDM-RRGKPTVHRQYGEAMAMLVGDALQALAFEVLVAPLVEADPQAARVPAATMVAV 170
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAI 243
+ RA GS G+ GQ +++ +L + ++ K G + + G +
Sbjct: 171 LARAAGSWGMAGGQALDIEGVGLRLSRPQLEAM---------HRAKTGAMLSVSVELGLL 221
Query: 244 LGGGSEKEI-ELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GG ++ E ++RYG +G+ +V L T + L K A K
Sbjct: 222 AGGQPSADLAEAMQRYGRAIGLAFQVVDDILDVTADSATLGKTAGK 267
>gi|410449072|ref|ZP_11303136.1| polyprenyl synthetase [Leptospira sp. Fiocruz LV3954]
gi|410017054|gb|EKO79122.1| polyprenyl synthetase [Leptospira sp. Fiocruz LV3954]
gi|456875196|gb|EMF90420.1| polyprenyl synthetase [Leptospira santarosai str. ST188]
Length = 313
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 7/201 (3%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
E++E M++ + A + P L +AA + +++ ++L +H S IH++LP D
Sbjct: 36 ELFEAMKYSLVAGGKRLRPVLVLAASGGLQSETRNSLLLGSSLECIHTYSLIHDDLPSMD 95
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRIL-RVMVEMTR 186
+ PT++ F +L DA+ F ++ G+N L R ++E+
Sbjct: 96 NDDF-RRGLPTLHRKFSEAIAILAGDALNSFAFYFISLV---QGDNEDYFLHRDLLEILH 151
Query: 187 -AMGSQGVVEGQYNELQCSQCDDDDR-KLNGITDVEMTYETYKKKEGRLHACGAACGAIL 244
G+ G+V GQ +LQ + + DR N VEM T++ K G L G L
Sbjct: 152 IGCGAPGMVSGQIYDLQMERENPKDRNSKNEQEKVEMVRLTHRLKTGALIKAALLLGNRL 211
Query: 245 GGGSEKEIELLRRYGFYVGMI 265
+K E L +YG +G++
Sbjct: 212 RKDWKKREEFLSKYGEDLGLL 232
>gi|304415488|ref|ZP_07396128.1| geranyltranstransferase [Candidatus Regiella insecticola LSR1]
gi|304282658|gb|EFL91181.1| geranyltranstransferase [Candidatus Regiella insecticola LSR1]
Length = 313
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 12/218 (5%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
++ E +R+ V + P L A ++ G VAAAA+ +HA S +H++LP D
Sbjct: 38 QLIEAIRYTVLCGGKRIRPYLVYATGKMFGLSPGSLDVAAAAVECIHAYSLVHDDLPAMD 97
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
+L + +P+ + F +L DA+ LLA P R L+++ E+ +A
Sbjct: 98 DDNL-RRGQPSCHIKFGEAIAILAGDALQTLAFSLLADQPMPNVTLENR-LKIVSELAKA 155
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGG- 246
+G+ G+ GQ +L C L I ++ K G L GA+ G
Sbjct: 156 IGAGGMCAGQALDLAAEHCQISLASLEKI---------HRHKTGALIRAAVRIGALAAGE 206
Query: 247 GSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
SEK + LL Y +G+ + L T E + + K
Sbjct: 207 RSEKTLSLLDDYADAIGLAFQVQDDILDITGETDRMGK 244
>gi|125973349|ref|YP_001037259.1| farnesyl-diphosphate synthase [Clostridium thermocellum ATCC 27405]
gi|125713574|gb|ABN52066.1| Polyprenyl synthetase [Clostridium thermocellum ATCC 27405]
Length = 295
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 53 IGAHLRQAVVVKEPVE--VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAAL 110
+ +L + +V E E +Y MR+ + A + P L +A C+++GG EQ + A A+
Sbjct: 14 VNEYLDRCIVQNELPEKSLYSAMRYSLMAGGKRLRPVLSLAVCDMLGGSVEQVLPFACAV 73
Query: 111 HVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPA 170
++H S IH++LP D + +PT + + +L D +L E++ +
Sbjct: 74 EMIHTYSLIHDDLPAMDNDDF-RRGRPTNHKVYGEALAILAGDGLLNLAFEIMLENIIKN 132
Query: 171 GNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKE 230
G+ R + + +A G G++ GQ +L+ D+ LN ++ K
Sbjct: 133 GDME-RKSKAAAVIAKAAGMNGMIAGQVIDLESEGKQVDNEILN---------RMHRLKT 182
Query: 231 GRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
G L AIL G +I+ L + +G+
Sbjct: 183 GALIKAPVVSAAILCGADADDIQKLDEFAENLGL 216
>gi|147919413|ref|YP_685765.1| putative farnesyltranstransferase [Methanocella arvoryzae MRE50]
gi|116077932|emb|CAJ36439.2| putative farnesyltranstransferase [Methanocella arvoryzae MRE50]
Length = 314
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 93/202 (46%), Gaps = 22/202 (10%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
V EP E+ E +R+ + + +L ACE VGG+ QA+V AA + ++H S + ++
Sbjct: 29 VIEPPELAEVVRYALCQKGKKIRASLLTIACEAVGGNIAQAMVPAAVVEMIHNTSLVLDD 88
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
+ + T + + T+ H + N L+ DA+L + A +S + ++
Sbjct: 89 VIDNAETR---RGRSTINHRWGNNMALIACDALLALTI-------RQASKSSVNMTNAII 138
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
E A + EG+ EL D Y+ ++K L + A GA
Sbjct: 139 ECA-ANSMLSLAEGEALELVGKDYTLKD-----------YYKIAERKTASLFSASAEIGA 186
Query: 243 ILGGGSEKEIELLRRYGFYVGM 264
++GGG+ KE++ LR YG +G+
Sbjct: 187 LVGGGTSKEVKSLREYGTSIGI 208
>gi|358636220|dbj|BAL23517.1| polyprenyl synthetase [Azoarcus sp. KH32C]
Length = 298
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 17/231 (7%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++ MR+ V + P L AA L G + A A+ ++HA S +H++LP
Sbjct: 32 PQRLHAAMRYAVLGGGKRVRPLLVHAAGRLAGADPARLDRIACAVELIHAYSLVHDDLPC 91
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D ++ + KPT++ + T LLV DA+ ++LA D P L ++ +
Sbjct: 92 MD-DDVLRRGKPTVHVEYDEATALLVGDALQALAFQVLA--DTPLAATPAVQLEMIALLG 148
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHAC---GAACGA 242
RA GS+G+ GQ +L +T E+ + K + A GA CG
Sbjct: 149 RASGSRGMAGGQAIDLGAVG--------KQLTREELEFMHIHKTGALIRASVLLGAQCGD 200
Query: 243 ILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVN 293
L +++ L YG VG++ +V L + L K A K + N
Sbjct: 201 AL---PAEQLAPLDHYGKVVGLLFQVVDDILDAQADTATLGKTAGKDADQN 248
>gi|56420928|ref|YP_148246.1| geranyltranstransferase [Geobacillus kaustophilus HTA426]
gi|47076820|dbj|BAD18360.1| geranyltranstransferase [Geobacillus kaustophilus]
gi|56380770|dbj|BAD76678.1| geranyltranstransferase (farnesyl-diphosphate synthase)
[Geobacillus kaustophilus HTA426]
Length = 297
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 96/202 (47%), Gaps = 11/202 (5%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
++ P + + M + + A + P L +A + +G + A A+ ++H S IH++
Sbjct: 28 LRGPETLKKAMAYSLEAGGKRIRPLLLLATIQALGKDPAIGLPVACAIEMIHTYSLIHDD 87
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D L + KPT + F +L DA+L + +L+A D+ S R L+++
Sbjct: 88 LPSMDNDDL-RRGKPTNHKVFGEAMAILAGDALLTYAFQLIAEVDDDRVPPSVR-LQLIE 145
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
++ +A G +G+V GQ +++ + E+ Y ++ K G++ GA
Sbjct: 146 QLAKAAGPEGMVAGQAADMEAEG--------KTLALAELEY-IHRHKTGKMLQYSVHAGA 196
Query: 243 ILGGGSEKEIELLRRYGFYVGM 264
+LGG ++ L + ++G+
Sbjct: 197 LLGGADGRQTRELNEFAAHLGL 218
>gi|288801181|ref|ZP_06406636.1| polyprenyl synthetase [Prevotella sp. oral taxon 299 str. F0039]
gi|288331792|gb|EFC70275.1| polyprenyl synthetase [Prevotella sp. oral taxon 299 str. F0039]
Length = 325
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 19/212 (8%)
Query: 53 IGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHV 112
+ ++ V ++P +YEP+++ + + P L + +L + + A+AL
Sbjct: 11 LNQYIDSIVFDRKPASLYEPIKYSLSMGGKRIRPMLMLLTYQLYKNDPQSILPVASALET 70
Query: 113 MHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGN 172
H + +H++L +L+ + +PT++ + NT +L D+ML F +LLA
Sbjct: 71 YHNYTLLHDDLM---DNALLRRGQPTVHKKWNANTAILSGDSMLVFAYKLLAEC------ 121
Query: 173 NSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGR 232
N ++ V+ T + + + EGQ Q D D N + + E E + K
Sbjct: 122 NVDKLKEVLDLFT--ITALEIGEGQ-------QYDMDFELRNDVAESEYI-EMIRLKTSV 171
Query: 233 LHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
L AC GAIL G ++ L R+G +G+
Sbjct: 172 LLACSMKIGAILAGAPSEDANNLYRFGELIGL 203
>gi|375009473|ref|YP_004983106.1| geranyltranstransferase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359288322|gb|AEV20006.1| Geranyltranstransferase [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 297
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 96/202 (47%), Gaps = 11/202 (5%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
++ P + + M + + A + P L +A + +G + A A+ ++H S IH++
Sbjct: 28 LRGPETLKKAMAYSLEAGGKRIRPLLLLATIQALGKDPAIGLPVACAIEMIHTYSLIHDD 87
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D L + KPT + F +L DA+L + +L+A D+ S R L+++
Sbjct: 88 LPSMDNDDL-RRGKPTNHKVFGEAMAILAGDALLTYAFQLIAEVDDDRVPPSVR-LQLIE 145
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
++ +A G +G+V GQ +++ + E+ Y ++ K G++ GA
Sbjct: 146 QLAKAAGPEGMVAGQAADMEAEG--------KTLALAELEY-IHRHKTGKMLQYSVHAGA 196
Query: 243 ILGGGSEKEIELLRRYGFYVGM 264
+LGG ++ L + ++G+
Sbjct: 197 LLGGADGRQTRELNEFAAHLGL 218
>gi|256005455|ref|ZP_05430418.1| Polyprenyl synthetase [Clostridium thermocellum DSM 2360]
gi|385778739|ref|YP_005687904.1| polyprenyl synthetase [Clostridium thermocellum DSM 1313]
gi|419722103|ref|ZP_14249252.1| Polyprenyl synthetase [Clostridium thermocellum AD2]
gi|419724850|ref|ZP_14251907.1| Polyprenyl synthetase [Clostridium thermocellum YS]
gi|255990595|gb|EEU00714.1| Polyprenyl synthetase [Clostridium thermocellum DSM 2360]
gi|316940419|gb|ADU74453.1| Polyprenyl synthetase [Clostridium thermocellum DSM 1313]
gi|380771739|gb|EIC05602.1| Polyprenyl synthetase [Clostridium thermocellum YS]
gi|380781857|gb|EIC11506.1| Polyprenyl synthetase [Clostridium thermocellum AD2]
Length = 298
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 53 IGAHLRQAVVVKEPVE--VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAAL 110
+ +L + +V E E +Y MR+ + A + P L +A C+++GG EQ + A A+
Sbjct: 17 VNEYLDRCIVKNELPEKSLYSAMRYSLMAGGKRLRPVLSLAVCDMLGGSVEQVLPFACAV 76
Query: 111 HVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPA 170
++H S IH++LP D + +PT + + +L D +L E++ +
Sbjct: 77 EMIHTYSLIHDDLPAMDNDDF-RRGRPTNHKVYGEALAILAGDGLLNLAFEIMLENIIKN 135
Query: 171 GNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKE 230
G+ R + + +A G G++ GQ +L+ D+ LN ++ K
Sbjct: 136 GDME-RKSKAAAVIAKAAGMNGMIAGQVIDLESEGKQVDNEILN---------RMHRLKT 185
Query: 231 GRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
G L AIL G +I+ L + +G+
Sbjct: 186 GALIKAPVVSAAILCGADADDIQKLDEFAENLGL 219
>gi|281417549|ref|ZP_06248569.1| Polyprenyl synthetase [Clostridium thermocellum JW20]
gi|281408951|gb|EFB39209.1| Polyprenyl synthetase [Clostridium thermocellum JW20]
Length = 298
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 53 IGAHLRQAVVVKEPVE--VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAAL 110
+ +L + +V E E +Y MR+ + A + P L +A C+++GG EQ + A A+
Sbjct: 17 VNEYLDRCIVQNELPEKSLYSAMRYSLMAGGKRLRPVLSLAVCDMLGGSVEQVLPFACAV 76
Query: 111 HVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPA 170
++H S IH++LP D + +PT + + +L D +L E++ +
Sbjct: 77 EMIHTYSLIHDDLPAMDNDDF-RRGRPTNHKVYGEALAILAGDGLLNLAFEIMLENIIKN 135
Query: 171 GNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKE 230
G+ R + + +A G G++ GQ +L+ D+ LN ++ K
Sbjct: 136 GDME-RKSKAAAVIAKAAGMNGMIAGQVIDLESEGKQVDNEILN---------RMHRLKT 185
Query: 231 GRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
G L AIL G +I+ L + +G+
Sbjct: 186 GALIKAPVVSAAILCGADADDIQKLDEFAENLGL 219
>gi|395791810|ref|ZP_10471266.1| hypothetical protein MEC_01257 [Bartonella alsatica IBS 382]
gi|395408113|gb|EJF74733.1| hypothetical protein MEC_01257 [Bartonella alsatica IBS 382]
Length = 300
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 12/226 (5%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + + MR+ V + P L + + L E + A AL +H S IH++
Sbjct: 32 IARPEILLKAMRYGVLNGGKRLRPFLVIQSGALFDIPAEHTLDVACALECVHCYSLIHDD 91
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D +L + +PT++ AF T +L +A+L F E++A + + RI +++
Sbjct: 92 LPAMDNDTL-RRGQPTVHIAFDEATAILAGNALLTFAFEIIAHKASELSFET-RI-KLIT 148
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+ ++ G G++ GQ +L+ ++K T++ +T + K AC A GA
Sbjct: 149 ALAQSAGLGGMIGGQMLDLEA------EKKPQESTNI-ITLQRMKTAALISFACQA--GA 199
Query: 243 ILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
I+G S++ E L +G Y G+ + L T + L K A K
Sbjct: 200 IIGNASKELTEKLAAFGTYFGLAFQLTDDLLDVTASTKVLGKTAGK 245
>gi|406835647|ref|ZP_11095241.1| polyprenyl synthetase [Schlesneria paludicola DSM 18645]
Length = 312
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 13/229 (5%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P ++ E M + + A + P L + ACE GG + A+ AA A+ ++H S IH++
Sbjct: 31 IDSPSKLSESMAYSLLAGGKRLRPILVLLACEACGGDSDAALPAACAIEMIHTYSLIHDD 90
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP + + T + + +L DA+L E++A P G +
Sbjct: 91 LPAM-DDDDYRRGRLTNHKVYGEAMAILAGDALLTLAFEVMARDIQPGGVAAA----CCA 145
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITD-------VEMTYETYKKKEGRLHA 235
++ A G G+V GQ +L+ Q DR+L TD + +++K GRL
Sbjct: 146 DLASAAGWCGMVGGQVADLEAEQ-QSADRQLGSATDNSGESAGLAQLEAIHRRKTGRLLM 204
Query: 236 CGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
GA + + + L +G VG+ I L T + +L K
Sbjct: 205 SAVTLGARVAQAKPELVNRLEEFGKRVGLAFQIADDLLDVTGDATKLGK 253
>gi|329895161|ref|ZP_08270845.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC3088]
gi|328922475|gb|EGG29816.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC3088]
Length = 298
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 105 VAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA 164
+AAAA+ +H S +H++LP D L + +PT++ + T +LV DA+ + ELL
Sbjct: 74 LAAAAIESIHTYSLVHDDLPAMDNDDL-RRGQPTVHRQYDEATAILVGDALQAWAFELLT 132
Query: 165 SSDN-PAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTY 223
D PA +++ ++ E+ +A G +G+V GQ ++Q + + V+
Sbjct: 133 QIDTLPA----DKVVAMVKELAQASGPKGMVLGQALDMQATGASE---------SVDYLK 179
Query: 224 ETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELK 283
+ + K G L GA KE +L YG +G+ +V L T + L
Sbjct: 180 QLHSLKTGALIRSALRLGAYCMNAGSKERRVLSAYGDAIGLCFQVVDDILDVTTDSATLG 239
Query: 284 KLAFKLREVNSFN 296
K A K +E +
Sbjct: 240 KTAGKDQEADKLT 252
>gi|12231186|dbj|BAB20977.1| putative GGPP synthase [Lactuca indica var. laciniata]
Length = 126
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 76/134 (56%), Gaps = 15/134 (11%)
Query: 134 KSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGV 193
+ KPT + + + +L DA+L F E +A++ G +S RILR + E+ + +GS+G+
Sbjct: 6 RGKPTNHIVYGEDVAVLAGDALLSFSFEHIATA--TKGVSSDRILRAIGELAKCIGSEGL 63
Query: 194 VEGQYNELQCSQCDDDDRKLNGITDVEMTY--ETYKKKEGRLHACGAACGAILGGGSEKE 251
V GQ ++ CS+ D G+ +E + +T EG + GAI+GGGS++E
Sbjct: 64 VAGQVVDV-CSEGAD-----VGLDHLEFIHLHKTAALLEGSV-----VLGAIMGGGSDEE 112
Query: 252 IELLRRYGFYVGMI 265
IE LR++ +G++
Sbjct: 113 IEKLRKFARSIGLL 126
>gi|433444536|ref|ZP_20409408.1| polyprenyl synthetase [Anoxybacillus flavithermus TNO-09.006]
gi|432001564|gb|ELK22439.1| polyprenyl synthetase [Anoxybacillus flavithermus TNO-09.006]
Length = 290
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 95/202 (47%), Gaps = 13/202 (6%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
++ P + E M + + A + P L ++ + A AL ++H S IH++
Sbjct: 23 LQAPQTIKEAMLYSLRAGGKRIRPLLLLSTLHAFRKPIGIGMSVACALEMIHTYSLIHDD 82
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D L + KPT + F +L DA+L + +++A + + +R++
Sbjct: 83 LPSMDNDDL-RRGKPTNHKVFGEANAILAGDALLTYAFQVVADDKTISSDVK---VRLIS 138
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
E+ +A G +G+V GQ +L+ I+ ++ Y ++ K G+L GA
Sbjct: 139 ELAKAAGPEGMVGGQVADLEGEG--------KTISLQQLEY-IHRHKTGKLLQYSVRAGA 189
Query: 243 ILGGGSEKEIELLRRYGFYVGM 264
ILG +E+++ LL + ++G+
Sbjct: 190 ILGEATEQQLTLLTLFADHLGL 211
>gi|401565678|ref|ZP_10806501.1| geranyltranstransferase [Selenomonas sp. FOBRC6]
gi|400185582|gb|EJO19809.1| geranyltranstransferase [Selenomonas sp. FOBRC6]
Length = 291
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 16/176 (9%)
Query: 107 AAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASS 166
AAAL ++H S IH++LP D L + KPT + + +L DA+L ++
Sbjct: 68 AAALEMIHTYSLIHDDLPAMDDDEL-RRGKPTNHVVYGDGIAILAGDALLTLAFSVILRQ 126
Query: 167 DNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETY 226
+ ++ +LRV+ E++RA G++G+V GQ +L +DR++ +E +
Sbjct: 127 KDV---HAEALLRVVDEISRAAGAEGMVGGQVLDLMA-----EDRQIT----MEELRRVH 174
Query: 227 KKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM---IQGIVSRRLGPTEEI 279
K G L GAIL G +E+++ L Y + G+ I + +G E+I
Sbjct: 175 MGKTGALFHAALRSGAILAGATEEQLAALTAYADHFGLAFQITDDILDVIGTAEDI 230
>gi|429738300|ref|ZP_19272112.1| polyprenyl synthetase [Prevotella saccharolytica F0055]
gi|429160496|gb|EKY02957.1| polyprenyl synthetase [Prevotella saccharolytica F0055]
Length = 324
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 19/217 (8%)
Query: 48 SVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAA 107
++ + I A+L + + P +Y+P+++ + + P L + A L E+ + A
Sbjct: 6 TILDKINAYLERIPEGRTPQSLYQPIQYVLSIGGKRIRPTLMLLAYNLFKDDPERILAPA 65
Query: 108 AALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD 167
L H + +H++ L D L + KPT++ + NT +L D+ML + +
Sbjct: 66 CGLETYHNYTLLHDD--LMDNADL-RRGKPTVHKRWDANTAILSGDSMLVLAYLYIMQCE 122
Query: 168 NPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYK 227
S ++ VM T+ G EGQ QCD D N +T+ E E +
Sbjct: 123 ------SEKLQEVMALFTQTALEIG--EGQ-------QCDMDFEHRNDVTEEEYI-EMIR 166
Query: 228 KKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
K L AC GAIL G S+ + L ++G +G+
Sbjct: 167 LKTSVLLACAMKMGAILAGASDADANNLYKFGEQIGL 203
>gi|328956986|ref|YP_004374372.1| geranyltranstransferase [Carnobacterium sp. 17-4]
gi|328673310|gb|AEB29356.1| geranyltranstransferase [Carnobacterium sp. 17-4]
Length = 299
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 112/239 (46%), Gaps = 20/239 (8%)
Query: 48 SVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAA 107
S E++ ++ + + K P+ +E M + + A + P L +A + +GG + +
Sbjct: 13 SFEEEMLGYIGENGIKKAPL--HEAMFYSLEAGGKRIRPLLLLATIQSLGGDIRKGYAVS 70
Query: 108 AALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD 167
AAL +H S IH++LP D L + KPT + + +T +L DA+L E++A SD
Sbjct: 71 AALEFIHTYSLIHDDLPAMDNDDL-RRGKPTSHIVYGEDTAILAGDALLTQAFEIIAVSD 129
Query: 168 NPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYK 227
+ + +++++ + ++ G +G++ GQ ++Q D +L I ++
Sbjct: 130 ----ASPEKKVKLILALAKSAGPEGMILGQMADIQGETKDLSLEELQFI---------HR 176
Query: 228 KKEGRL--HACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
K G L AAC I +E E E L Y ++G+ I L +EE+ K
Sbjct: 177 NKTGELLKFPIYAAC-VIADAATEVE-EQLMGYAEHIGLAYQIRDDILDVIGNVEEIGK 233
>gi|67008259|emb|CAJ00343.1| putative geranylgerannylpyrophosphate synthase [Andrographis
paniculata]
Length = 140
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 11/151 (7%)
Query: 132 IPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQ 191
+ + +PT + F +T +L DA+L +A R++R + E+ A+GS+
Sbjct: 1 LRRGRPTNHKVFGEDTAVLAGDALLSLAFNHVAEKTKNV--EHCRVVRAIAELALAIGSE 58
Query: 192 GVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKE 251
G+V GQ +L D + I+ E+ Y + K L A CG ILGGG E
Sbjct: 59 GLVAGQIVDL--------DSEGEKISLNELEY-IHVHKTSMLLEAAAVCGGILGGGESTE 109
Query: 252 IELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
+E LR+Y +G++ +V L T+ E+L
Sbjct: 110 VESLRKYARCIGLLFQVVDDILDVTKSSEQL 140
>gi|350546103|ref|ZP_08915527.1| Octaprenyl-diphosphate synthase /Dimethylallyltransferase
/Geranyltranstransferase / Geranylgeranyl pyrophosphate
synthetase [Candidatus Burkholderia kirkii UZHbot1]
gi|350526129|emb|CCD41295.1| Octaprenyl-diphosphate synthase /Dimethylallyltransferase
/Geranyltranstransferase / Geranylgeranyl pyrophosphate
synthetase [Candidatus Burkholderia kirkii UZHbot1]
Length = 289
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 17/226 (7%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++E MR+ V + P L AA EL G + A+AAL ++H S +H+++P
Sbjct: 23 PARLHEAMRYAVLGGGKRVRPLLVHAAGELTGAGSQAVEAASAALEMIHVYSLVHDDMPA 82
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D +L + KPT++ + T LLV DA+ L + N G N + ++ E+
Sbjct: 83 MDDDTL-RRGKPTVHIQYDEATALLVGDALQSQAFVALTAEGN--GLNDSQQAALVRELA 139
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYET-YKKKEGRLHACGAACGAIL 244
A GS + GQ +L+ RKL+ ET ++KK G L GA+
Sbjct: 140 VASGSLSMAGGQAIDLESV-----GRKLS-----RPELETMHRKKTGALLRASVRMGALA 189
Query: 245 GG--GSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
G G++ + L +Y VG+ +V L T + L K A K
Sbjct: 190 GTHPGADA-LASLDQYAAAVGLAFQVVDDILDVTADSATLGKTAGK 234
>gi|317128429|ref|YP_004094711.1| polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522]
gi|315473377|gb|ADU29980.1| Polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522]
Length = 295
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 23/204 (11%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
PV++ + M + + A + P L +A A A+ ++H S IH++LP
Sbjct: 31 PVQLRDAMIYSLKAGGKRIRPMLLLATLRGYNKPLSHGYDVACAIEMIHTYSLIHDDLPA 90
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASS----DNPAGNNSGRILRVM 181
D L + KPT + F +L D +L + +L++SS DN L ++
Sbjct: 91 MDNDDL-RRGKPTNHKVFGEAMAILAGDGLLTYSFQLISSSMLLPDNVK-------LLLI 142
Query: 182 VEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGIT-DVEMTYETYKKKEGRLHACGAAC 240
+M++A G +G+V GQ ++Q GIT V+ + + K G L A
Sbjct: 143 QKMSQAAGPEGMVGGQVLDMQGE----------GITLSVDQLQKIHHHKTGDLLAVSVES 192
Query: 241 GAILGGGSEKEIELLRRYGFYVGM 264
GAIL G SE E L + ++G+
Sbjct: 193 GAILAGVSENERISLTSFAKHLGI 216
>gi|220934012|ref|YP_002512911.1| farnesyl-diphosphate synthase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219995322|gb|ACL71924.1| farnesyl-diphosphate synthase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 299
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 67/136 (49%), Gaps = 2/136 (1%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++E MR+ + P L A + +G E+ A A+ ++H S IH++LP
Sbjct: 32 PARLHEAMRYSALGGGKRVRPVLVYGAGQALGVAPERLDGPACAVELIHVYSLIHDDLPA 91
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D L + KPT + AF +L DAM ++L S D ++ R LR+M +
Sbjct: 92 MDNDDL-RRGKPTCHKAFDEAMAILAGDAMQALAFQIL-SMDPDMLDDPARRLRMMETLA 149
Query: 186 RAMGSQGVVEGQYNEL 201
RA GS+G+ GQ +L
Sbjct: 150 RAAGSRGMAGGQAIDL 165
>gi|158320641|ref|YP_001513148.1| polyprenyl synthetase [Alkaliphilus oremlandii OhILAs]
gi|158140840|gb|ABW19152.1| Polyprenyl synthetase [Alkaliphilus oremlandii OhILAs]
Length = 295
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 13/211 (6%)
Query: 56 HLRQAVVVKEPVE--VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVM 113
HL+ +KE + E M++ +FA + P L +A+ ++ E+ + A + ++
Sbjct: 17 HLKDYFNMKEGYNQTLIESMKYSLFAGGKRLRPILSLASYQMFRDDIEEVMPYACGIEMI 76
Query: 114 HAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNN 173
H S IH++LP D + K T + + +L D +L + EL+ + +
Sbjct: 77 HTYSLIHDDLPAMDNDDY-RRGKLTNHKVYNEGVAILAGDGLLNYSFELMLENAIKQNDI 135
Query: 174 SGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRL 233
I+ + E++ + G G++ GQ +L+ N I D EM + K L
Sbjct: 136 YKHIVAIK-EISNSAGVHGMIGGQVVDLESE---------NKIIDKEMLDYIHINKTAAL 185
Query: 234 HACGAACGAILGGGSEKEIELLRRYGFYVGM 264
GAI+ G E++I + + G +G+
Sbjct: 186 ITTSLKVGAIIAGAQEEDIRNMEKVGLNLGL 216
>gi|452944424|ref|YP_007500589.1| Polyprenyl synthetase [Hydrogenobaculum sp. HO]
gi|452882842|gb|AGG15546.1| Polyprenyl synthetase [Hydrogenobaculum sp. HO]
Length = 258
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 9/160 (5%)
Query: 46 WTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVA---ACELVGGHREQ 102
+ + I LR+ + EP +Y+ M ++VF + P LCV AC+L E
Sbjct: 3 FDDLRPKIEKRLRELLTPFEPKVLYDAMAYYVFQEGKRIRPVLCVIGGYACDL---DEED 59
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
AI A+ +H S IH+++P D + KPT + F + LL D +L ++
Sbjct: 60 AITLGCAIEFIHNYSLIHDDMPELDNDDE-RRGKPTCHKIFGQDIALLAGDGLLSLAFDI 118
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQ 202
L S+ N + +V+ +++ G +G+V GQ +++
Sbjct: 119 L--SNESLYKNPKNLAKVVNYVSKNAGIEGMVAGQVYDIK 156
>gi|265984787|ref|ZP_06097522.1| polyprenyl synthetase [Brucella sp. 83/13]
gi|264663379|gb|EEZ33640.1| polyprenyl synthetase [Brucella sp. 83/13]
Length = 304
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 12/202 (5%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + MRH V + P L + + L G H + + AAAL +H S +H++
Sbjct: 36 IARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQHGQAVLRVAAALECIHCYSLVHDD 95
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D L + +PT++ AF +L D++L + +++A SD + + RI +++
Sbjct: 96 LPAMDDDDL-RRGQPTVHRAFDEAAAILAGDSLLTYAFDIIA-SDETELDATTRI-KLVC 152
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+TRA G G+ GQ +L D+ GI +T + K AC A GA
Sbjct: 153 ALTRASGLGGMAGGQALDLMAETRKPDE---AGI----ITLQAMKTGALIRFACEA--GA 203
Query: 243 ILGGGSEKEIELLRRYGFYVGM 264
I+ G S ++ E + +G +G+
Sbjct: 204 IIAGASREDRERMAEFGSAIGL 225
>gi|345863395|ref|ZP_08815606.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
pyrophosphate synthetase [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345125473|gb|EGW55342.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
pyrophosphate synthetase [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 290
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 71/136 (52%), Gaps = 2/136 (1%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P +++ MR+ V + P L A + +G Q AA A+ ++HA S +H++LP
Sbjct: 23 PARLHQAMRYAVLGGGKRIRPILTYATGQALGVEINQLDTAACAVEMIHAYSLVHDDLPA 82
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D L + +PT + A+ T +LV DA+ +++ +S N + R L ++ ++
Sbjct: 83 MDDDEL-RRGRPTCHKAYDEATAILVGDALQTQAFQIICTSGNLHASAETR-LEMIETLS 140
Query: 186 RAMGSQGVVEGQYNEL 201
RA GS+G+ GQ +L
Sbjct: 141 RASGSRGMCGGQALDL 156
>gi|327400499|ref|YP_004341338.1| polyprenyl synthetase [Archaeoglobus veneficus SNP6]
gi|327316007|gb|AEA46623.1| Polyprenyl synthetase [Archaeoglobus veneficus SNP6]
Length = 319
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
VKEP +Y RH + A + P +C+ + E VGG E I AA A+ +H + IH++
Sbjct: 24 VKEPEGLYNAARHLINAGGKRLRPVMCLISAEAVGGDVESVIPAAVAIETIHNFTLIHDD 83
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
+ DR L + PT++ A+ T +L D + ++L+S + A N +V
Sbjct: 84 --IMDRDEL-RRGVPTVHVAYDEPTAILAGDTLFAEAFKILSSCNVEAEN--------LV 132
Query: 183 EMTRAMGSQ--GVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAAC 240
+ +R + + EGQY ++ K I++ E E +KK L A A
Sbjct: 133 KASRMLADVCIEICEGQYLDMSF-------EKREKISESEYL-EMVRKKTAVLIASACAM 184
Query: 241 GAILGGGSEKEIELLRRYGFYVGM 264
A+L G + + L +G Y G+
Sbjct: 185 PAVL-FGMDSYAKALWNFGIYSGI 207
>gi|291550249|emb|CBL26511.1| Geranylgeranyl pyrophosphate synthase [Ruminococcus torques L2-14]
Length = 296
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 10/216 (4%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
+ E M + + A + P L + L GG E AA+ ++H S +H++LP D
Sbjct: 32 IMEAMEYSLMAGGKRLRPMLMMETYRLFGGETEVIYPFMAAMEMIHTYSLVHDDLPAMDN 91
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
+ + T + + + +L DA+L + E + S RI + M + R
Sbjct: 92 DEY-RRGRKTTHIVYGEDMGILAGDALLNYAFETACKAFEQFPEESLRIGQAMRVLARKA 150
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
G G++ GQ +++ S D+ L+ I ++ K G L GAIL G S
Sbjct: 151 GIYGMIGGQVVDVKESGHQIDEEVLDFI---------FRLKTGALIESAMMIGAILAGAS 201
Query: 249 EKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
+++++ +++ +GM I L T E+L K
Sbjct: 202 KEDVKSMQKIAGKIGMAFQIQDDILDVTSTTEQLGK 237
>gi|326387412|ref|ZP_08209021.1| farnesyl-diphosphate synthase [Novosphingobium nitrogenifigens DSM
19370]
gi|326208068|gb|EGD58876.1| farnesyl-diphosphate synthase [Novosphingobium nitrogenifigens DSM
19370]
Length = 305
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 88/202 (43%), Gaps = 12/202 (5%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
+YE MR+ + P L A L G R A+ AL +H S IH+++P D
Sbjct: 43 LYEAMRYSAIGGGKRLRPLLVTAVASLFGVDRSVAVRVGTALESIHVYSLIHDDMPCMDN 102
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
SL KPT++ A+ T +L DA+ E+L+ D G+ RI ++ + A
Sbjct: 103 DSL-RHGKPTVHLAYDDATAVLAGDALQALAFEILSDPD-LVGDPFVRI-ELVRTLAHAS 159
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
G G+V GQ ++ D L +T ++ + K G L A GAILG
Sbjct: 160 GINGMVGGQMMDIAAETASFD---LATVTRLQ------QLKTGALLAAAVEMGAILGHVP 210
Query: 249 EKEIELLRRYGFYVGMIQGIVS 270
+ LR Y +G+ IV
Sbjct: 211 PEGRTHLRGYARNIGLAFQIVD 232
>gi|423612401|ref|ZP_17588262.1| hypothetical protein IIM_03116 [Bacillus cereus VD107]
gi|401245990|gb|EJR52342.1| hypothetical protein IIM_03116 [Bacillus cereus VD107]
Length = 297
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 100/199 (50%), Gaps = 11/199 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P + E M + + A + P L A + G R + AA AL ++H S IH++LP
Sbjct: 31 PNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDDLPC 90
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D L + KPT + F +L D +L + +++ + + P ++ + +R+++E+
Sbjct: 91 MDDDDL-RRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYE-PKEISAEKKVRLVLELA 148
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
+A G +G+V GQ +++ + ++L T E+ Y +K K G+L GAIL
Sbjct: 149 KAAGPEGMVAGQVADMEA-----EGKRL---TINELEY-IHKHKTGKLLEFAVLAGAILS 199
Query: 246 GGSEKEIELLRRYGFYVGM 264
+E++ E L + Y+G+
Sbjct: 200 DATEEQEEKLLTFAKYIGL 218
>gi|345877461|ref|ZP_08829207.1| geranylgeranyl pyrophosphate synthetase [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344225510|gb|EGV51867.1| geranylgeranyl pyrophosphate synthetase [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 300
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 71/136 (52%), Gaps = 2/136 (1%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P +++ MR+ V + P L A + +G Q AA A+ ++HA S +H++LP
Sbjct: 33 PARLHQAMRYAVLGGGKRIRPILTYATGQALGVEINQLDTAACAVEMIHAYSLVHDDLPA 92
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D L + +PT + A+ T +LV DA+ +++ +S N + R L ++ ++
Sbjct: 93 MDDDEL-RRGRPTCHKAYDEATAILVGDALQTQAFQIICTSGNLHASAETR-LEMIETLS 150
Query: 186 RAMGSQGVVEGQYNEL 201
RA GS+G+ GQ +L
Sbjct: 151 RASGSRGMCGGQALDL 166
>gi|313672239|ref|YP_004050350.1| farnesyl-diphosphate synthase [Calditerrivibrio nitroreducens DSM
19672]
gi|312938995|gb|ADR18187.1| farnesyl-diphosphate synthase [Calditerrivibrio nitroreducens DSM
19672]
Length = 298
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 10/214 (4%)
Query: 71 EPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTS 130
E MR+ +FA + PAL ++ + G+ ++ AAA+ ++H S IH++LP D
Sbjct: 36 EAMRYSLFAGGKRLRPALIYSSFGIFDGYFDKVTPFAAAVEMLHTYSLIHDDLPAMDDDD 95
Query: 131 LIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGS 190
L + KPT + + +L DA+L E++ SS + +L ++ A G
Sbjct: 96 L-RRGKPTNHVVYGEGVAILAGDALLTKAFEIMTSSSLNPDVDPVMMLEAANKLAIATGE 154
Query: 191 QGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEK 250
+G+V GQY +L+ D +++ K + C GAILG +++
Sbjct: 155 KGMVGGQYADLKAEG--------GFFNDGTVSFIHLNKTAALISYC-CELGAILGYATDE 205
Query: 251 EIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
E + + ++G +G+ I+ L T EEL K
Sbjct: 206 EKKDMSQFGKKIGLAFQIIDDILDLTCTTEELGK 239
>gi|319406284|emb|CBI79921.1| geranyltranstransferase [Bartonella sp. AR 15-3]
Length = 300
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 94/210 (44%), Gaps = 12/210 (5%)
Query: 55 AHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMH 114
+H Q + P + MR+ V P L + + L E ++ AL +H
Sbjct: 24 SHKAQNGEISRPEILINAMRYGVLNGGKRFRPFLVIQSAALFDIPPEHSLDIGVALECLH 83
Query: 115 AASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNS 174
S IH++LP D +L + KPT++ AF T +L +A+L F E++A +S
Sbjct: 84 CYSLIHDDLPALDNDTL-RRGKPTVHTAFDEGTAILAGNALLTFAFEIIAH--KACSFSS 140
Query: 175 GRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLH 234
+ ++ +T+A G G++ GQ +L+ + ++ +T + K
Sbjct: 141 KTKIDLITALTQAAGLGGMIGGQMLDLEAEKKPQNE-------SATITLQQMKTAALIRF 193
Query: 235 ACGAACGAILGGGSEKEIELLRRYGFYVGM 264
AC A GAI+G S+ + L +G +G+
Sbjct: 194 ACQA--GAIMGQASKTLTDKLASFGTQIGL 221
>gi|255022132|ref|ZP_05294135.1| Polyprenyl synthetase [Acidithiobacillus caldus ATCC 51756]
gi|340782900|ref|YP_004749507.1| polyprenyl synthetase [Acidithiobacillus caldus SM-1]
gi|254968396|gb|EET25955.1| Polyprenyl synthetase [Acidithiobacillus caldus ATCC 51756]
gi|340557051|gb|AEK58805.1| Polyprenyl synthetase [Acidithiobacillus caldus SM-1]
Length = 304
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++E MR+ + P L A + +G E AAAAL ++HA S +H++LP
Sbjct: 36 PGRLHEAMRYSTLGGGKRVRPLLVYAGGQCLGLADELLDRAAAALEMIHAYSLVHDDLPA 95
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D + + +PT + AF T +LV DA+L ++LA + G + L + +++
Sbjct: 96 MDNDDM-RRGRPTCHKAFDEATAILVGDALLTHAFQVLA--EPVPGLAPAQQLAMALDLA 152
Query: 186 RAMGSQGVVEGQYNEL 201
RA GS+G+V GQ +L
Sbjct: 153 RAAGSRGMVGGQAIDL 168
>gi|118443490|ref|YP_878055.1| geranyltranstransferase [Clostridium novyi NT]
gi|118133946|gb|ABK60990.1| geranyltranstransferase [Clostridium novyi NT]
Length = 289
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 13/226 (5%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
VY+ M++ V + P L + + + + + A A+ ++H S IH++LP D
Sbjct: 28 VYDAMKYSVEVGGKRIRPTLMLCTYNVYKDNYKDIMPMACAIEMIHTYSLIHDDLPAMDN 87
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
L + KPT + F +L D +L + ++ N + NN R L+ ++ A
Sbjct: 88 DDL-RRGKPTNHKVFGEAMAILAGDGLLNEAMNIMF---NYSLNNDIRALKASKIISEAS 143
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
G +G++ GQ ++ IT + Y +K K G+L GAILG
Sbjct: 144 GVEGMIGGQVVDIISEG--------KKITIDNLKY-MHKNKTGKLIKSPIIAGAILGNAP 194
Query: 249 EKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVNS 294
+++I++L +G +G+ I L +++ L K K +E N
Sbjct: 195 KEDIDILEEFGEKLGLAFQIKDDILDVIGDVKVLGKEIHKDKENNK 240
>gi|110802213|ref|YP_699103.1| geranyltranstransferase [Clostridium perfringens SM101]
gi|110682714|gb|ABG86084.1| geranyltranstransferase [Clostridium perfringens SM101]
Length = 290
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 12/228 (5%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
+Y+ M + V + P L + + + ++ + A A+ ++H S IH++LP D
Sbjct: 28 LYDSMAYSVNVGGKRIRPILMLLSYYIYKSDYKKILTPAIAIEMIHTYSLIHDDLPCMDN 87
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
L + KPT + F +L DA+L +++L G ++ + +++ + A
Sbjct: 88 DDL-RRGKPTNHKVFGEAIAVLAGDALLNEAMKILVDYSLEEGISALKATKIIAD---AA 143
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
GS G++ GQ ++ ++D + I+ E+ Y + KK G L GAIL S
Sbjct: 144 GSDGMIGGQIVDI----INEDKEE---ISLKELDY-MHLKKTGELIKASIMSGAILAEAS 195
Query: 249 EKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVNSFN 296
E++I+ L +G+ +G+ I L ++L K K +E N N
Sbjct: 196 ERDIKKLEDFGYKLGLAFQIKDDILDVVGNAKDLGKNVHKDQESNKNN 243
>gi|145298029|ref|YP_001140870.1| geranyltranstransferase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|418361767|ref|ZP_12962414.1| geranyltranstransferase [Aeromonas salmonicida subsp. salmonicida
01-B526]
gi|142850801|gb|ABO89122.1| geranyltranstransferase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|356686883|gb|EHI51473.1| geranyltranstransferase [Aeromonas salmonicida subsp. salmonicida
01-B526]
Length = 296
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 94/195 (48%), Gaps = 12/195 (6%)
Query: 71 EPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTS 130
+ MR+ + + P L A E++G RE AAA+ +HA S +H++LP D
Sbjct: 34 DAMRYGLLLGGKRVRPFLVYAVGEMLGVKRELLDGPAAAVECIHAYSLLHDDLPAMDNDD 93
Query: 131 LIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGS 190
L + +PT++ AF T +L DA+ +LA P + R+ R++ + RA G
Sbjct: 94 L-RRGQPTVHKAFDEGTAILAGDALQTLAFSILADHPLPDRLLANRV-RMLSTLARASGY 151
Query: 191 QGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG-SE 249
G+ GQ +LQ + R+++ + ++E + ++ K G L C A GA+ +
Sbjct: 152 LGMCGGQALDLQA-----EGRQIS-LPELE---QVHRHKTGALIECAVALGALCKADVDD 202
Query: 250 KEIELLRRYGFYVGM 264
+ L+ Y +G+
Sbjct: 203 TTLAALQTYAAAIGL 217
>gi|386719412|ref|YP_006185738.1| octaprenyl-diphosphate synthase [Stenotrophomonas maltophilia D457]
gi|384078974|emb|CCH13569.1| Octaprenyl-diphosphate synthase [Stenotrophomonas maltophilia D457]
Length = 292
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 97/225 (43%), Gaps = 18/225 (8%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P +++ MR+ V M P L A+ L G EQ AA A+ ++HA S +H++LP
Sbjct: 29 PQRLHQAMRYSVLGGGKRMRPLLVYASGHLFGAQPEQLDAAAMAVELIHAYSLVHDDLPA 88
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRV--MVE 183
D +L + KPT + AF T +L DA+ LLA + PA LRV +
Sbjct: 89 MDDDAL-RRGKPTTHIAFDEATAILAGDALQTRAFGLLADAPLPA------TLRVACLQT 141
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAI 243
+ A G+ G+ GQ ++ + + L +T + K G L GA+
Sbjct: 142 LAHASGASGMCGGQALDIDAT---GQQQTLAALT------RMHALKTGALIRAAVRMGAL 192
Query: 244 LGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
G E ++ L + +G+ + L E+L K A K
Sbjct: 193 CGQAHEPQLAQLDSFADALGLAFQVRDDILDVEASSEQLGKTAGK 237
>gi|386001681|ref|YP_005919980.1| Farnesyl-diphosphate synthase/ geranylgeranyl-diphosphate synthase
[Methanosaeta harundinacea 6Ac]
gi|357209737|gb|AET64357.1| Farnesyl-diphosphate synthase/ geranylgeranyl-diphosphate synthase
[Methanosaeta harundinacea 6Ac]
Length = 322
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 21/214 (9%)
Query: 53 IGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHV 112
I + + + V P E+Y RH V A + P++ + A E VGG + AA ++ +
Sbjct: 15 ISGAIEELLPVVPPRELYAAGRHLVDAGGKRLRPSMLLMAAEAVGGDLRAVVPAAVSIEL 74
Query: 113 MHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGN 172
+H + IH+++ + T + +P ++ + +L D + E+L ++
Sbjct: 75 VHNFTLIHDDIMDNAETR---RGRPAVHVKWDEAGAILAGDTLYSKAFEILTVAEARPEE 131
Query: 173 NSGRILRVMVEMTRAMGSQ--GVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKE 230
MV + + + EGQ+ +++ + D+ +T+ E E +KK
Sbjct: 132 --------MVASVKMLAKTCAAICEGQWLDMEFERRDE-------VTEAEY-LEMIEKKT 175
Query: 231 GRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
G L+ A GA L G +EKE + L R+G VGM
Sbjct: 176 GVLYGAAAWMGARLSGAAEKEADGLERFGRLVGM 209
>gi|227499080|ref|ZP_03929217.1| polyprenyl synthetase [Acidaminococcus sp. D21]
gi|352684487|ref|YP_004896472.1| polyprenyl synthetase [Acidaminococcus intestini RyC-MR95]
gi|226904529|gb|EEH90447.1| polyprenyl synthetase [Acidaminococcus sp. D21]
gi|350279142|gb|AEQ22332.1| polyprenyl synthetase [Acidaminococcus intestini RyC-MR95]
Length = 292
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 13/221 (5%)
Query: 44 SYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQA 103
+Y E + L+ + V V E M + A + P L +AA + VGG
Sbjct: 6 TYLKERSELVDGFLKIRIGVGAISRVDEAMAYSALAGGKRLRPILLMAAADAVGGKGTDF 65
Query: 104 IVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL 163
+ A+AL ++H S IH++LP D + + T + F +L D +L E++
Sbjct: 66 LPLASALEMIHTYSLIHDDLPEMDNDD-YRRGRLTNHKVFGQAMAVLAGDGLLTQAFEVM 124
Query: 164 ASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTY 223
G + ++ ++ + R G +G+V GQ ++ + + EM
Sbjct: 125 TEQ---KGVDPALMVEIIHLIARCAGPEGMVGGQALDINAEE--------KHLEPAEMK- 172
Query: 224 ETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
+ ++ K G L GA+LGGGS+ E+ L ++ + G+
Sbjct: 173 QLHEAKTGALFIAAIRSGALLGGGSKDEVNALTKFATFFGL 213
>gi|62959193|gb|AAY23704.1| farnesyl diphosphate synthase [Exiguobacterium sp. JL-25]
Length = 145
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 18/157 (11%)
Query: 120 HENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASS-DNPAGNNSGRIL 178
H++LP D L + KPT + + + +L DA+L + E +A + D PA R+L
Sbjct: 1 HDDLPAMDNDDL-RRGKPTNHKVYGEDIAILAGDALLSYAFEYVARTPDIPAE----RLL 55
Query: 179 RVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDV--EMTYETYKKKEGRLHAC 236
+V+V + +A+G++G+V GQ +L+ G TDV E + K G L
Sbjct: 56 QVIVRLGQAVGAEGLVGGQVVDLESE----------GKTDVSVETLNFIHTHKTGALLEV 105
Query: 237 GAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRL 273
GA+L G +E++LL RY +G+ IV L
Sbjct: 106 CVTTGAVLAGAKPEEVQLLSRYAQNIGLAFQIVDDIL 142
>gi|404330150|ref|ZP_10970598.1| geranylgeranyl pyrophosphate synthase [Sporolactobacillus vineae
DSM 21990 = SL153]
Length = 294
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 92/192 (47%), Gaps = 18/192 (9%)
Query: 42 NKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHRE 101
+K W + E + L QA + P ++ E M + + A + P L A + +G E
Sbjct: 11 SKKVW--LEEKLPDFLEQASI---PGKLKESMIYSLMAGGKRIRPILLFATLDALGCREE 65
Query: 102 QAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE 161
+ + A L ++H S IH++LP D L + KPT + F T +L D +L +
Sbjct: 66 KGLSTAIGLEMIHTYSLIHDDLPAMDNDDL-RRGKPTNHVIFGEATAVLAGDGLLTAAFD 124
Query: 162 LLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEM 221
L+A +PA N R R++ + A G +G+V GQ ++L+ +++ L ++
Sbjct: 125 LVAG--DPALNAEIRC-RILQMLANAAGPEGMVGGQEDDLEA-----EEKTLT----IDE 172
Query: 222 TYETYKKKEGRL 233
+++K GRL
Sbjct: 173 LMSVHRRKTGRL 184
>gi|315223793|ref|ZP_07865642.1| polyprenyl synthetase [Capnocytophaga ochracea F0287]
gi|420159496|ref|ZP_14666297.1| polyprenyl synthetase [Capnocytophaga ochracea str. Holt 25]
gi|314946239|gb|EFS98239.1| polyprenyl synthetase [Capnocytophaga ochracea F0287]
gi|394762146|gb|EJF44436.1| polyprenyl synthetase [Capnocytophaga ochracea str. Holt 25]
Length = 321
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 56 HLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHA 115
H+ + KEP+ +YEP+++ + + P L + A + G +A+ AA A+ V H
Sbjct: 14 HIEKIFTPKEPIHLYEPIQYILNLGGKRIRPILTLIATNIFGKDYRKALNAATAIEVFHN 73
Query: 116 ASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSG 175
S IH++ + D SL + KPT++ + N +L DAML +LL D P+
Sbjct: 74 FSLIHDD--IMDNASL-RRGKPTVHQKWDTNVGILSGDAMLIIAYKLL--EDCPS----- 123
Query: 176 RILRVMVEMTRAMGSQG--VVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRL 233
++ E+ + + V EGQ Q D D KL ++ +E + K L
Sbjct: 124 ---KIFQELVKTLSETALKVCEGQ-------QMDMDFEKLQEVS-IEAYMQMISYKTSVL 172
Query: 234 HACGAACGAILGGGSEKEIELLRRYGFYVGM 264
G+I+ +++ + +G +G+
Sbjct: 173 IGAALQMGSIISETTKENQINMYNFGLNLGI 203
>gi|317051795|ref|YP_004112911.1| polyprenyl synthetase [Desulfurispirillum indicum S5]
gi|316946879|gb|ADU66355.1| Polyprenyl synthetase [Desulfurispirillum indicum S5]
Length = 296
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 14/196 (7%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
++E M + V A + P LC+ + + + A A+ ++H S IH++LP D
Sbjct: 34 IHEAMLYSVRAGGKRLRPLLCLLTAGALRQDESRVLDIACAIEMIHTYSLIHDDLPALDN 93
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
L + KPT + + +L DA+L E+L P + ++RV+ E+ +
Sbjct: 94 DDL-RRGKPTNHRVYGEAMAILAGDALLNRAFEVLCQL--PLAPD--LVIRVIAEIASSS 148
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
G+ G++ GQ ++Q D+ ++ K GR+ AI +
Sbjct: 149 GTAGMIGGQVVDIQSE---------GKSIDMPTMRYIHENKTGRIIRSCLVSSAIACQAT 199
Query: 249 EKEIELLRRYGFYVGM 264
++IEL RYG+ +G+
Sbjct: 200 AEQIELFDRYGYNIGL 215
>gi|306839463|ref|ZP_07472271.1| geranyltranstransferase [Brucella sp. NF 2653]
gi|306405408|gb|EFM61679.1| geranyltranstransferase [Brucella sp. NF 2653]
Length = 288
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 12/202 (5%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + MRH V + P L + + L G H + + AAAL +H S +H++
Sbjct: 20 IARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQHGQAVLRVAAALECIHCYSLVHDD 79
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D L + +PT++ AF +L D++L + +++A SD + + RI +++
Sbjct: 80 LPAMDDDDL-RRGQPTVHRAFDEAAAILAGDSLLTYAFDIIA-SDETELDATTRI-KLVC 136
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+TRA G G+ GQ +L D+ GI +T + K AC A GA
Sbjct: 137 ALTRASGLGGMAGGQALDLMAETRKPDE---AGI----ITLQAMKTGALIRFACEA--GA 187
Query: 243 ILGGGSEKEIELLRRYGFYVGM 264
I+ G S ++ E + +G +G+
Sbjct: 188 IIAGASREDRERMAEFGSAIGL 209
>gi|116753785|ref|YP_842903.1| farnesyltranstransferase [Methanosaeta thermophila PT]
gi|116665236|gb|ABK14263.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase
[Methanosaeta thermophila PT]
Length = 327
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 17/202 (8%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
V P +Y+ RH + A + P+L + A E VG + + AA A+ ++H + IH++
Sbjct: 30 VSRPEGLYDAARHLLGAGGKRLRPSLLLIAGESVGCDAARLVPAAVAIELVHNFTLIHDD 89
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
+ D SL + KP ++ + + +L D + E+L+ D P R+L M
Sbjct: 90 --IMDNASL-RRGKPAVHVIWGTSGAILAGDTLYSKAFEMLSMVDAP----PERVLAAMD 142
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+ R S + EGQ+ +L+ + + +T+ E E +KK G L+ A GA
Sbjct: 143 MLARTCTS--ICEGQWQDLEFERAES-------VTEKEY-LEMIEKKTGVLYGASAWIGA 192
Query: 243 ILGGGSEKEIELLRRYGFYVGM 264
LGG + L +G GM
Sbjct: 193 TLGGAPPEVAGGLEEFGRLTGM 214
>gi|332638330|ref|ZP_08417193.1| farnesyl-diphosphate synthase [Weissella cibaria KACC 11862]
Length = 287
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 87/194 (44%), Gaps = 12/194 (6%)
Query: 71 EPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTS 130
+ M + V A + P L +A + G + AA+AL ++H S IH++LP D
Sbjct: 33 DAMTYAVMAGGKRLRPLLTLAVAQSYGLGINGLLRAASALELIHTYSLIHDDLPAMDNDD 92
Query: 131 LIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGS 190
+ + KPT + AF + +L DA+ P + LAS +P + + +++ A G+
Sbjct: 93 M-RRGKPTTHKAFGEDVAILAGDALQPLAYQWLAS--DPLLTTPQKA-ELTLQLALASGA 148
Query: 191 QGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEK 250
G+V GQ ++ + ++ + +K G L A A G I+ S++
Sbjct: 149 DGMVAGQVMDMAATNA--------ATISLDQVKAIHYRKTGALIAYAAIAGGIMAHASDE 200
Query: 251 EIELLRRYGFYVGM 264
E L +G G+
Sbjct: 201 VKETLWNFGMAYGL 214
>gi|308069598|ref|YP_003871203.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus polymyxa
E681]
gi|305858877|gb|ADM70665.1| Geranylgeranyl pyrophosphate synthetase (GGPP synthetase)
[Paenibacillus polymyxa E681]
Length = 307
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 10/199 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P + E M + + A + P L +AA E GG RE A+ A A+ ++H S IH++LP
Sbjct: 39 PAVLRESMNYSLTAGGKRLRPLLVIAAAEAFGGSREAALPVACAVEMVHTYSLIHDDLPA 98
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
+ K T + + +L DA+L + + G +S +L ++ +++
Sbjct: 99 M-DDDDYRRGKLTNHKVYGEAVAVLAGDALLTHAFYSIVQAGRRHGVSSDALLSIVEDLS 157
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
G++G+V GQ ++ Q G+T +E + K L G +G
Sbjct: 158 EMSGARGMVGGQVADMSGEQ---------GMTGIEELEFIHLHKTADLIIFSLLAGGRIG 208
Query: 246 GGSEKEIELLRRYGFYVGM 264
G + ++E LRR+G +G+
Sbjct: 209 GADKSQLEALRRFGRDLGL 227
>gi|62959211|gb|AAY23713.1| farnesyl diphosphate synthase [Synechococcus cf. elongatus
CCMP1379]
Length = 145
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 18/157 (11%)
Query: 120 HENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASS-DNPAGNNSGRIL 178
H+++P D L + KPT + + + +L DA+L + E +A + D PA R+L
Sbjct: 1 HDDMPWMDNDDL-RRGKPTNHKVYGEDIAILAGDALLSYAFEYVARTPDVPAE----RLL 55
Query: 179 RVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDV--EMTYETYKKKEGRLHAC 236
+V+V + +A+G++G+V GQ +L+ G TDV E + K G L
Sbjct: 56 QVIVRLGQAVGAEGLVGGQVVDLESE----------GKTDVSVETLNFIHTHKTGALLEV 105
Query: 237 GAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRL 273
GA+L G +E++LL RY +G+ IV L
Sbjct: 106 CVTAGAVLAGAKPEEVQLLSRYAQNIGLAFQIVDDIL 142
>gi|456386670|gb|EMF52206.1| hopB protein [Streptomyces bottropensis ATCC 25435]
Length = 350
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 83/189 (43%), Gaps = 19/189 (10%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
PAL V + E+ G E I A A+ ++H S +H++L D + + T++ P
Sbjct: 65 PALAVMSAEVTGAAPETGIPGAVAVELVHNFSLLHDDLMDGDEQR---RHRDTVWKVHGP 121
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
+LV DA++ E+L + R R + TRA+ ++GQ ++
Sbjct: 122 AQAILVGDALMVLANEILLELGTA---EAARATRRVTTATRAL-----IDGQAQDISYEH 173
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
+ VE E K G L AC + GA+LGG + + L +YG+++G+
Sbjct: 174 RER--------VTVEECLEMEGNKTGALLACACSIGAVLGGADDHTADTLEKYGYHLGLA 225
Query: 266 QGIVSRRLG 274
V LG
Sbjct: 226 FQAVDDLLG 234
>gi|418019309|ref|ZP_12658817.1| Geranylgeranyl pyrophosphate synthase [Candidatus Regiella
insecticola R5.15]
gi|347605326|gb|EGY29784.1| Geranylgeranyl pyrophosphate synthase [Candidatus Regiella
insecticola R5.15]
Length = 313
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 12/218 (5%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
++ E +R+ V + P L A ++ G VAAAA+ +HA S +H++LP D
Sbjct: 38 QLIEAIRYTVLCGGKRIRPYLVYATGKMFGLSPSSLDVAAAAVECIHAYSLVHDDLPAMD 97
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
+L + +P+ + F +L DA+ LLA P R L+++ E+ +A
Sbjct: 98 DDNL-RRGQPSCHIKFGEAIAILAGDALQTLAFSLLADQPMPDVTLENR-LKMVSELAKA 155
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGG- 246
+G+ G+ GQ +L C L I ++ K G L GA+ G
Sbjct: 156 IGAGGMCAGQALDLAAEHCQISLASLEKI---------HRHKTGALIRTAVRIGALAAGE 206
Query: 247 GSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
SEK + LL Y +G+ + L T E + K
Sbjct: 207 RSEKTLSLLDDYADAIGLAFQVQDDILDITGETARMGK 244
>gi|195953616|ref|YP_002121906.1| Polyprenyl synthetase [Hydrogenobaculum sp. Y04AAS1]
gi|195933228|gb|ACG57928.1| Polyprenyl synthetase [Hydrogenobaculum sp. Y04AAS1]
Length = 258
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 9/160 (5%)
Query: 46 WTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVA---ACELVGGHREQ 102
+ + I LR+ + EP +Y+ M ++VF + P LCV AC+L E
Sbjct: 3 FDDLRPKIEKRLRELLTPFEPKVLYDAMAYYVFQEGKRIRPVLCVIGGYACDL---DEED 59
Query: 103 AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL 162
AI A+ +H S IH+++P D + KPT + F + LL D +L ++
Sbjct: 60 AITLGCAVEFIHNYSLIHDDMPELDNDDE-RRGKPTCHKIFGQDIALLAGDGLLSLAFDI 118
Query: 163 LASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQ 202
L S+ N + +V+ +++ G +G+V GQ +++
Sbjct: 119 L--SNESLYKNPKNLAKVVNYVSKNAGIEGMVAGQVYDIK 156
>gi|406706619|ref|YP_006756972.1| polyprenyl synthetase [alpha proteobacterium HIMB5]
gi|406652395|gb|AFS47795.1| Polyprenyl synthetase [alpha proteobacterium HIMB5]
Length = 290
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 101/220 (45%), Gaps = 12/220 (5%)
Query: 46 WTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIV 105
T + +D + L+ + ++ E+ PM + +F+ + + + + I+
Sbjct: 5 LTKIAKDTNSFLKTFIKTQKKTELIVPMSYGLFSGGKKIRSKILKDIGYIFNVDYKTLII 64
Query: 106 AAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLAS 165
+A+ +HA S IH++LP D + + KP+ + F +T +L +++L E+L++
Sbjct: 65 IGSAVECIHAYSLIHDDLPCMDNDDM-RRGKPSTHKKFGESTAVLAGNSLLTLAYEILSN 123
Query: 166 SDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYET 225
+ + L+++ +++ G QG+ GQ+ +L +K++ VEM
Sbjct: 124 EKLKIKDETK--LKLIKKISECSGHQGIAGGQFLDLNFEH-----KKVSKKRIVEMEI-- 174
Query: 226 YKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
KK G+L + I+ S KEI + G +G++
Sbjct: 175 --KKTGKLFSFCCMAPLIIKDRSAKEISMYENIGSEIGLL 212
>gi|121593453|ref|YP_985349.1| farnesyl-diphosphate synthase [Acidovorax sp. JS42]
gi|120605533|gb|ABM41273.1| farnesyl-diphosphate synthase [Acidovorax sp. JS42]
Length = 311
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 97/232 (41%), Gaps = 13/232 (5%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L + V P + E MR+ V + P L +AA VGG E A+ AA A+ ++HA
Sbjct: 37 LSRWVCHDAPAGLGEAMRYAVLDGGKRLRPLLVLAASHAVGGQPEAALRAACAVELIHAY 96
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGR 176
S +H+++P D ++ + KPT++ F LL DA+ ELL D R
Sbjct: 97 SLVHDDMPCMD-NDVMRRGKPTVHVRFGEARALLAGDALQALAFELLTPEDGVPLAMQAR 155
Query: 177 ILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHAC 236
+ R + + A G G + +D R ++ + K G L
Sbjct: 156 LCRELAQAAGAAGMAGGQAIDLASVGLQLSEDQLRHMHSL------------KTGALLQA 203
Query: 237 GAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GA+ G + ++ L YG +G+ +V L T++ L K A K
Sbjct: 204 SVVMGAVCGQPTGAALQALTDYGAAMGLAFQVVDDVLDVTQDSATLGKTAGK 255
>gi|62959239|gb|AAY23727.1| farnesyl diphosphate synthase [Nocardia sp. JL-538]
Length = 145
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 18/157 (11%)
Query: 120 HENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASS-DNPAGNNSGRIL 178
H++LP D L + KPT + + + +L DA+L + E +A + D PA R+L
Sbjct: 1 HDDLPSMDNDDL-RRGKPTNHKVYGEDIAILAGDALLSYAFEYVARTPDIPAE----RLL 55
Query: 179 RVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDV--EMTYETYKKKEGRLHAC 236
+V+V + +A+G++G+V GQ +L+ G TDV E + K G L
Sbjct: 56 QVIVRLGQAVGAEGLVGGQVVDLESE----------GKTDVSVETLNFIHTHKTGALLEV 105
Query: 237 GAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRL 273
GA+L G +E++LL RY +G+ IV L
Sbjct: 106 CVTAGAVLAGAKPEEVQLLSRYAQNIGLAFQIVDDIL 142
>gi|310829047|ref|YP_003961404.1| polyprenyl synthetase [Eubacterium limosum KIST612]
gi|308740781|gb|ADO38441.1| Polyprenyl synthetase [Eubacterium limosum KIST612]
Length = 297
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 89/219 (40%), Gaps = 10/219 (4%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P + M++ +FA + P L C +GG A A+ ++H S IH++LP
Sbjct: 30 PDIIVSAMKYSLFAGGKRLRPILMKETCRCLGGDSADVKPLACAIEMIHTYSLIHDDLPA 89
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D L + KPT + + N +L DA+L + +E + + + R + +
Sbjct: 90 MDNDDL-RRGKPTNHKVYGENMAILAGDALLNYAMETAIAGIPVDPSKTFHYTRALSYLA 148
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
+ G G++ GQ ++ N + E Y + K G L CG +
Sbjct: 149 HSSGVNGMIGGQTGDILSE---------NEAINEEKMYYIHAHKTGALLKAAVLCGGFVA 199
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
+ +E + L Y +G+ IV L T + + L K
Sbjct: 200 KVTGEERDALETYSEKIGLAFQIVDDILDVTGDEKTLGK 238
>gi|306844758|ref|ZP_07477343.1| geranyltranstransferase [Brucella inopinata BO1]
gi|306274930|gb|EFM56700.1| geranyltranstransferase [Brucella inopinata BO1]
Length = 288
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 12/202 (5%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + MRH V + P L + + L G H + + AAAL +H S +H++
Sbjct: 20 IARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQHGQAVLRVAAALECIHCYSLVHDD 79
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D L + +PT++ AF +L D++L + +++A SD + + RI +++
Sbjct: 80 LPAMDDDDL-RRGQPTVHKAFDEAAAILAGDSLLTYAFDIIA-SDETELDATTRI-KLVC 136
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+TRA G G+ GQ +L D+ GI +T + K AC A GA
Sbjct: 137 ALTRASGLGGMAGGQALDLMAETRKPDE---AGI----ITLQAMKTGALIRFACEA--GA 187
Query: 243 ILGGGSEKEIELLRRYGFYVGM 264
I+ G S ++ E + +G +G+
Sbjct: 188 IIAGASREDRERMAEFGSAIGL 209
>gi|408786407|ref|ZP_11198144.1| geranyltranstransferase [Rhizobium lupini HPC(L)]
gi|424911455|ref|ZP_18334832.1| geranylgeranyl pyrophosphate synthase [Rhizobium leguminosarum bv.
viciae USDA 2370]
gi|392847486|gb|EJB00009.1| geranylgeranyl pyrophosphate synthase [Rhizobium leguminosarum bv.
viciae USDA 2370]
gi|408487779|gb|EKJ96096.1| geranyltranstransferase [Rhizobium lupini HPC(L)]
Length = 304
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 100/202 (49%), Gaps = 12/202 (5%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + E MRH V + P L + + L+GG E A+ A AAL +H S +H++
Sbjct: 36 IARPQNLLEAMRHGVLNGGKRLRPFLVIESAALLGGDGEAALFAGAALECLHCYSLVHDD 95
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D L + +PT++ F T +L D++L +++AS +NP +GR +++
Sbjct: 96 LPAMDDDDL-RRGQPTVHRKFDEATAILAGDSLLTLAFDIIASEENPLA--AGRKAALVL 152
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+ RA G G+ GQ +L + D+ GI +T + K AC A GA
Sbjct: 153 SLARAAGIGGMAGGQALDLAAEKNAPDE---TGI----ITLQAMKTGALLRFACEA--GA 203
Query: 243 ILGGGSEKEIELLRRYGFYVGM 264
I+ G + E + LR +G +G+
Sbjct: 204 IIAGSDDCERQRLRLFGEKIGL 225
>gi|390453366|ref|ZP_10238894.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus peoriae KCTC
3763]
Length = 307
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 10/199 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P + E M + + A + P L +AA E GG RE A+ A A+ ++H S IH++LP
Sbjct: 39 PAVLRESMNYSLTAGGKRLRPLLVIAAAEAFGGSREAALPVACAVEMVHTYSLIHDDLPA 98
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
+ K T + + +L DA+L + + G +S +L ++ E++
Sbjct: 99 M-DDDDYRRGKLTNHKVYGEAVAILAGDALLTHAFYSVVQAGRRHGISSDALLSIVEELS 157
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
G++G+V GQ ++ Q G+T +E + K L G +G
Sbjct: 158 EMSGARGMVGGQVADMSGEQ---------GLTGIEELEYIHLHKTADLIIFSLLAGGRIG 208
Query: 246 GGSEKEIELLRRYGFYVGM 264
G ++ ++E LR++G +G+
Sbjct: 209 GANKNQLEALRQFGRDLGL 227
>gi|375309124|ref|ZP_09774405.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus sp. Aloe-11]
gi|375078433|gb|EHS56660.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus sp. Aloe-11]
Length = 307
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 10/199 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P + E M + + A + P L +AA E GG RE A+ A A+ ++H S IH++LP
Sbjct: 39 PAVLRESMNYSLTAGGKRLRPLLVIAAAEAFGGSREAALPVACAVEMVHTYSLIHDDLPA 98
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
+ K T + + +L DA+L + + G +S +L ++ E++
Sbjct: 99 M-DDDDYRRGKLTNHKVYGEAVAILAGDALLTHAFYSVVQAGRRHGVSSDALLSIVEELS 157
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
G++G+V GQ ++ Q G+T +E + K L G +G
Sbjct: 158 EMSGARGMVGGQVADMSGEQ---------GLTGIEELEYIHLHKTADLIIFSLLAGGRIG 208
Query: 246 GGSEKEIELLRRYGFYVGM 264
G + ++E LR++G +G+
Sbjct: 209 GADKNQLEALRQFGRDLGL 227
>gi|348028551|ref|YP_004871237.1| geranyltranstransferase [Glaciecola nitratireducens FR1064]
gi|347945894|gb|AEP29244.1| geranyltranstransferase [Glaciecola nitratireducens FR1064]
Length = 304
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 112/251 (44%), Gaps = 14/251 (5%)
Query: 35 AMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACE 94
A++ N + T + + + Q + E+ M++ VF+ M P L
Sbjct: 8 AIALLNIQQDVQTRIDRKLALFIDQQTQTAD--ELITAMKYSVFSGGKRMRPMLLSIVGN 65
Query: 95 LVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADA 154
++ + + VA+ ++ +HA S IH++LP D +L + KPT + F T +L DA
Sbjct: 66 MLDANPDDLDVASMSIECIHAYSLIHDDLPAMDDDAL-RRGKPTNHIQFGEATAILAGDA 124
Query: 155 MLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLN 214
+ E++ + N++ R+ V + +A G G+ GQ +L + N
Sbjct: 125 LQTLAFEIVLNHPLSKDNSAKRVDMAKV-IAKASGVNGMCAGQSIDLLATG--------N 175
Query: 215 GITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKE-IELLRRYGFYVGMIQGIVSRRL 273
I+ E+T E ++ K G L + + GAIL E I+LL++Y +G+ + L
Sbjct: 176 EISLAELT-ELHQLKTGALLSACVSLGAILAPSIPIEHIQLLQKYASKIGLAFQVQDDIL 234
Query: 274 GPTEEIEELKK 284
+ E L K
Sbjct: 235 DVISDSETLGK 245
>gi|209963898|ref|YP_002296813.1| geranylgeranyl pyrophosphate synthase [Rhodospirillum centenum SW]
gi|209957364|gb|ACI98000.1| geranylgeranyl pyrophosphate synthase [Rhodospirillum centenum SW]
Length = 296
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
++E MR+ + P L + + L G + A+ AAAA+ +H S +H++LP D
Sbjct: 34 LFEAMRYGCLGGGKRLRPFLVMESARLFGVNPACALRAAAAVEFIHCYSLVHDDLPAMDD 93
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRI-LRVMVEMTRA 187
+ L + +PT++ + T +L DA+L E+LA +P + ++ R++ + +A
Sbjct: 94 SDL-RRGRPTLHLEYDEATAILAGDALLTVAFEILA---DPETHEDAQVRCRLVSALAKA 149
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G +G+V GQ +L +DR D+ + K G L A A GAILG
Sbjct: 150 AGPRGMVGGQMLDLMA-----EDRTF----DIGAITRLQRLKTGELIAFSATAGAILGRA 200
Query: 248 SEKEIELLRRYGFYVGM 264
S + L+ Y +G+
Sbjct: 201 SPPQHHALQAYAHDLGL 217
>gi|150016579|ref|YP_001308833.1| polyprenyl synthetase [Clostridium beijerinckii NCIMB 8052]
gi|149903044|gb|ABR33877.1| Polyprenyl synthetase [Clostridium beijerinckii NCIMB 8052]
Length = 289
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 13/164 (7%)
Query: 102 QAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE 161
+ I AAA+ ++H S IH++LP D L + KPT + F+ N +L DA+L +
Sbjct: 61 KVIPMAAAMEMIHTYSLIHDDLPCMDNDDL-RRGKPTNHIKFQENIAVLAGDALLNEAMI 119
Query: 162 LLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEM 221
++ + NN+ LR E+ A G++G++ GQ ++ I+ E+
Sbjct: 120 IMMDYALKSENNA---LRAAHEIAVAAGAEGMIGGQVVDIISEG--------KKISQDEL 168
Query: 222 TYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
Y + KK G L GAIL E ++ LLR YG +G++
Sbjct: 169 EY-MHAKKTGALIRAAIVSGAILAEAPEDDLRLLREYGEKLGLV 211
>gi|312899122|ref|ZP_07758500.1| putative geranyltranstransferase [Megasphaera micronuciformis
F0359]
gi|310619789|gb|EFQ03371.1| putative geranyltranstransferase [Megasphaera micronuciformis
F0359]
Length = 293
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 15/197 (7%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
+YE M + + A + P L +A E G + + A AL +H+ S IH++LP D
Sbjct: 32 LYEAMNYSLNAGGKRIRPVLFLAVLEAAGTDPDAFLDLACALECVHSYSLIHDDLPAMDN 91
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLAS-SDNPAGNNSGRILRVMVEMTRA 187
+ KPT + + T +L D +L + EL+A+ S PA +IL+ + A
Sbjct: 92 DDF-RRGKPTNHKVYGDGTAVLAGDGLLTYAFELMAAQSAAPA----HKILQAIRIFAHA 146
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G G+V GQY +LQ G+ ++ K G + A+L G
Sbjct: 147 AGPAGMVGGQYFDLQSE---------GGVPTRAAMELMHRSKTGVIFTAIVQMAALLAGV 197
Query: 248 SEKEIELLRRYGFYVGM 264
+ ++ L YG +G+
Sbjct: 198 RNETMKALTTYGDQLGL 214
>gi|288560181|ref|YP_003423667.1| bifunctional short chain isoprenyl diphosphate synthase IdsA
[Methanobrevibacter ruminantium M1]
gi|288542891|gb|ADC46775.1| bifunctional short chain isoprenyl diphosphate synthase IdsA
[Methanobrevibacter ruminantium M1]
Length = 331
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 26/205 (12%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
PAL + +CE VGG++E A+ AAA+ ++H S IH+++ + + P+++ +
Sbjct: 48 PALTLISCEAVGGNKEDALKTAAAIELIHTFSLIHDDIM---DDDDMRRGMPSVHKVWDE 104
Query: 146 NTELLVADAMLPFGLELLASSDNP------AGNNSGRILRVMVEMTRAMGSQGVVEGQYN 199
+L D + E++ SS N + V++ S EG ++
Sbjct: 105 PLAILAGDTLFSKAFEMIISSKEENAHPEHVANALATVADACVKICEGQASDMSFEGDFD 164
Query: 200 ELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYG 259
+ EM Y KK G L A GAI+GG EKE+ L YG
Sbjct: 165 VKEAEYS-------------EMIY----KKTGALIAAATKAGAIMGGADEKEVTALYEYG 207
Query: 260 FYVGMIQGIVSRRLGPTEEIEELKK 284
+G+ I L + ++L K
Sbjct: 208 RMIGIAFQIQDDYLDVISDEKDLGK 232
>gi|89889496|ref|ZP_01201007.1| polyprenyl synthetase [Flavobacteria bacterium BBFL7]
gi|89517769|gb|EAS20425.1| polyprenyl synthetase [Flavobacteria bacterium BBFL7]
Length = 327
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L V +EP +Y+P+ + + + P L + + ++ GG ++A+ AA A+ V H
Sbjct: 15 LNSRVTAQEPASLYDPVHYILQLGGKRLRPILTLMSAQMYGGKIDKAMDAAIAVEVFHNF 74
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGR 176
+ +H+++ + D + + K T++ + NT +L DAML +L S D +
Sbjct: 75 TLLHDDI-MDDAD--LRRGKETVHVKWDVNTGILSGDAMLIMAYQLFNSYDPETFYWLNQ 131
Query: 177 IL-RVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHA 235
+ + +E V EGQ Q D D + +T E K K L
Sbjct: 132 VFSKTALE---------VCEGQ-------QYDVDFETRDDVTISEYI-NMIKLKTSVLVG 174
Query: 236 CGAACGAILGGGSEKEIELLRRYGFYVGM 264
C GAI+ G ++KE +L+ YG +G+
Sbjct: 175 CALQMGAIIAGVNKKEQQLIYDYGINIGL 203
>gi|31621279|gb|AAP59037.1| CrtE [Thiocapsa roseopersicina]
Length = 288
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 6/158 (3%)
Query: 47 TSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHR-EQAIV 105
T + + + A L P + E +RH VF + P LC+A G E A
Sbjct: 5 TRIEQALAAALESVTTSACPPRLAEAVRHAVFPGGARVRPRLCLAVAAACGSRDVEAADA 64
Query: 106 AAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLAS 165
A A++ ++H AS +H++LP D + L + P+++ A+ +L DA++ E LA
Sbjct: 65 AGASIELLHCASLVHDDLPCFDDSPLR-RGLPSVHRAYGEPLAVLAGDALIVLAFENLAR 123
Query: 166 SDNPAGNNSGRILRVMVEMTRAMG-SQGVVEGQYNELQ 202
GN+ R+ +++ ++RA+G G+V GQ E +
Sbjct: 124 V---LGNSPERLAPLLMTVSRAVGMPSGIVAGQAWECE 158
>gi|330445276|ref|ZP_08308928.1| geranyltranstransferase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489467|dbj|GAA03425.1| geranyltranstransferase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 300
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 94/202 (46%), Gaps = 16/202 (7%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
P L E++G ++ AAA+ +HA S IH++LP D +L + +PT + AF
Sbjct: 53 PFLTYVTGEMLGVTQDDLDTPAAAVECIHAYSLIHDDLPAMDDDAL-RRGQPTCHIAFDE 111
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
T +L DA+ E+LA+ N+ RI V E+ +A G+ G+ GQ +L+
Sbjct: 112 ATAILAGDALQTLAFEILANGQLSQDGNTQRIAMV-SELAKASGAAGMCLGQTLDLEA-- 168
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIEL---LRRYGFYV 262
+ K G+ +E+ ++ K G L C GA+ G EK I + L +Y +
Sbjct: 169 ----EGKHVGLEQLEL---IHRHKTGALIRCAVRLGALAAG--EKGIAILPQLDKYAEAI 219
Query: 263 GMIQGIVSRRLGPTEEIEELKK 284
G+ + L + E L K
Sbjct: 220 GLAFQVQDDILDVISDTETLGK 241
>gi|395783808|ref|ZP_10463657.1| hypothetical protein ME3_00313 [Bartonella melophagi K-2C]
gi|395425930|gb|EJF92090.1| hypothetical protein ME3_00313 [Bartonella melophagi K-2C]
Length = 300
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 108/232 (46%), Gaps = 14/232 (6%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + + MRH + P L + + L EQ++ AL +H S IH++
Sbjct: 32 IARPEILIKAMRHGTLNGGKRLRPFLVIQSAALFDIPFEQSLDIGVALECVHCYSLIHDD 91
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRI-LRVM 181
LP+ D +L + KPT++ F T +L +A+L E++A + A + S + + ++
Sbjct: 92 LPVMDNDTL-RRGKPTVHKEFNEATAILAGNALLTLAFEIIA---HKACDLSLKTRIDLI 147
Query: 182 VEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACG 241
+T+A G G++ GQ +L+ D + +T + K AC A G
Sbjct: 148 TALTQAAGLGGMLGGQMLDLEAENKPQDHHAI-------ITLQHMKTAALISFACQA--G 198
Query: 242 AILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVN 293
AI+G S+ +IE L +G ++G+ + L T + L K A K +E N
Sbjct: 199 AIIGNASKTQIEQLSTFGTHLGLAFQLTDDLLDVTISTKTLGKTAGKDKEAN 250
>gi|456983672|gb|EMG19911.1| polyprenyl synthetase [Leptospira interrogans serovar Copenhageni
str. LT2050]
Length = 327
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 96/204 (47%), Gaps = 5/204 (2%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
E++E M++ + A + P L +AA + + ++ A+L +H S IH++LP D
Sbjct: 50 ELFEAMKYSLVAGGKRLRPVLALAAFGGLQNETQNVLLLGASLECIHTYSLIHDDLPSMD 109
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
+ PT++ F +T +L DA+ F ++ G++ + R ++E+ A
Sbjct: 110 NDDF-RRGLPTLHKKFSESTAILAGDALNSFAFYFISWIRVENGDHF--LHRNLLEILHA 166
Query: 188 -MGSQGVVEGQYNELQCSQCDDDDRKLNGITD-VEMTYETYKKKEGRLHACGAACGAILG 245
G+ G+V GQ +LQ + + + L +D +EM T++ K G L G L
Sbjct: 167 GCGAPGMVSGQVYDLQMERENVKENDLTNQSDKIEMLQLTHRLKTGALIKSALLLGNRLR 226
Query: 246 GGSEKEIELLRRYGFYVGMIQGIV 269
+K L +YG +G++ I
Sbjct: 227 KDWKKRETSLSQYGEDLGLLFQIT 250
>gi|374324623|ref|YP_005077752.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus terrae
HPL-003]
gi|357203632|gb|AET61529.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus terrae
HPL-003]
Length = 307
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 10/199 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P + E M + + A + P L +AA E GG RE A+ A A+ ++H S IH++LP
Sbjct: 39 PAVLREAMNYSLNAGGKRLRPLLVIAATEAFGGSREAALPVACAVEMVHTYSLIHDDLPA 98
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
+ K T + + +L DA+L + S G +S +L ++ E++
Sbjct: 99 M-DDDDYRRGKLTNHKVYGEAVAVLAGDALLTHAFYSVVQSGRRHGISSDALLSIVEELS 157
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
G++G+V GQ ++ Q G+T +E + K L G +G
Sbjct: 158 EMSGARGMVGGQVADMSGEQ---------GMTGIEELEYIHLHKTADLIIFSLLAGGRIG 208
Query: 246 GGSEKEIELLRRYGFYVGM 264
G + ++E LR++G +G+
Sbjct: 209 GADKNQLEALRQFGRDLGL 227
>gi|52550277|gb|AAU84126.1| geranylgeranyl pyrophosphate synthase [uncultured archaeon
GZfos37B2]
Length = 280
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 96/222 (43%), Gaps = 31/222 (13%)
Query: 73 MRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLI 132
+RH + + P + + + EL GG ++ + AA A+ ++H+AS IH+++ L+
Sbjct: 31 VRHVFDSGGKKIRPIILILSSELFGGDADECVDAALAIELIHSASLIHDDIL---DVGLV 87
Query: 133 PKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQG 192
+ P++Y+ F +L D ++ +EL++ D + GR +M
Sbjct: 88 RRGVPSVYNQFGLAAAILCGDFLISKSIELISKYDRAVIQDFGR-------AGMSMSEGE 140
Query: 193 VVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEI 252
++ NE S+ D +E KK L A A G+ +GG + I
Sbjct: 141 ALDVNSNETNFSEND--------------YFECISKKTASLFAASARMGSRIGGAPARSI 186
Query: 253 ELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVNS 294
YG ++GM I+ ++I E K+L + + N+
Sbjct: 187 NRCTEYGTHLGMAYQII-------DDILECKELQHEKKSENT 221
>gi|91974793|ref|YP_567452.1| polyprenyl synthetase [Rhodopseudomonas palustris BisB5]
gi|91681249|gb|ABE37551.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisB5]
Length = 321
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 18/205 (8%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + E +R+ + P L V + + G R A++ AAL +H S IH++
Sbjct: 51 ITRPRRLMEAIRYATLGGGKRLRPFLAVESAAVFGVERASALLVGAALECIHCYSLIHDD 110
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D + L + +PT++ A+ T +L DA+L F +++ + R +V +
Sbjct: 111 LPAMDNSDL-RRGRPTLHKAYDDATAILAGDALLTFAFDIITR------DEVHRDPQVRL 163
Query: 183 EMTRAM----GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGA 238
++ R + G G+V GQ +L + DR+ + ++ + K G L G
Sbjct: 164 DLNRVLARCAGLGGMVGGQILDL-AGEGRFGDREPVDVARLQ------QMKTGALLRYGC 216
Query: 239 ACGAILGGGSEKEIELLRRYGFYVG 263
GAILG + L YG +G
Sbjct: 217 VAGAILGEAPPEHYRALDDYGRALG 241
>gi|422346488|ref|ZP_16427402.1| hypothetical protein HMPREF9476_01475 [Clostridium perfringens
WAL-14572]
gi|373226033|gb|EHP48360.1| hypothetical protein HMPREF9476_01475 [Clostridium perfringens
WAL-14572]
Length = 290
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 105/228 (46%), Gaps = 12/228 (5%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
+Y+ M + + + P L + A + ++ + A A+ ++H S IH++LP D
Sbjct: 28 LYDSMAYSINVGGKRIRPILMLLAYYIYKSDYKKILTPAMAIEMIHTYSLIHDDLPCMDN 87
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
L + KPT + F +L DA+L +++L G ++ + +++ + A
Sbjct: 88 DDL-RRGKPTNHKVFGEAIAVLAGDALLNEAMKILVDYSLEEGRSALKATKIIAD---AA 143
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
GS G++ GQ ++ ++D + I+ E+ Y + KK G L GA+L S
Sbjct: 144 GSDGMIGGQIVDI----INEDKEE---ISLKELDY-MHLKKTGELIKASIMSGAVLAEAS 195
Query: 249 EKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVNSFN 296
E +I+ L +G+ +G+ I L ++L K K +E N N
Sbjct: 196 EGDIKKLEDFGYKLGLAFQIKDDILDVVGNAKDLGKNVHKDQESNKNN 243
>gi|423341239|ref|ZP_17318954.1| hypothetical protein HMPREF1077_00384 [Parabacteroides johnsonii
CL02T12C29]
gi|409221247|gb|EKN14197.1| hypothetical protein HMPREF1077_00384 [Parabacteroides johnsonii
CL02T12C29]
Length = 324
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 21/200 (10%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL-P 124
P +YEP+ + + + PAL + AC L + + AI A L V H + +H++L
Sbjct: 24 PKSLYEPIEYILSLGGKRIRPALVLMACNLYKENVDIAIKPALGLEVFHNFTLLHDDLMD 83
Query: 125 LSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEM 184
+D+ ++KPT++ + NT +L DAML +L+ + S + ++
Sbjct: 84 EADKR----RNKPTVHKVWNDNTAILSGDAMLIAAYQLIGET------KSESLKEILDLF 133
Query: 185 TRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAIL 244
TR + + GQ +++ D +T+ E E + K L AC GAI+
Sbjct: 134 TRT--ALEICGGQQYDMEFESRTD-------VTEAEYI-EMIRLKTAVLLACALKMGAIM 183
Query: 245 GGGSEKEIELLRRYGFYVGM 264
G E + E L ++G +G+
Sbjct: 184 GNAPEADAEALYQFGINIGL 203
>gi|319407760|emb|CBI81407.1| geranyltranstransferase [Bartonella sp. 1-1C]
Length = 300
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 12/234 (5%)
Query: 55 AHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMH 114
+H Q + P + MRH V + P L + + L E ++ AL +H
Sbjct: 24 SHKAQNDEIIRPEMLINAMRHGVLNGGKRLRPFLVIQSAALFDIPPEDSLDIGVALECIH 83
Query: 115 AASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNS 174
S IH++LP D +L + +PT++ AF T +L +A+L F E++A +
Sbjct: 84 CYSLIHDDLPALDNDTL-RRGQPTVHIAFDEATAILAGNALLTFAFEIIAHKTCSFSPKT 142
Query: 175 GRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLH 234
+ ++ +T+A G G++ GQ +L+ + ++ N T T + K
Sbjct: 143 K--IELITALTQAAGLGGMIGGQLLDLEAEKKPHNE---NATT----TLQQMKTAALIRF 193
Query: 235 ACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
AC A GAI+G S+ L +G ++G+ + L T + L K A K
Sbjct: 194 ACQA--GAIMGRASKTLTHQLASFGTHIGLAFQLTDDLLDLTSHTKILGKTAGK 245
>gi|225388185|ref|ZP_03757909.1| hypothetical protein CLOSTASPAR_01920 [Clostridium asparagiforme
DSM 15981]
gi|225045743|gb|EEG55989.1| hypothetical protein CLOSTASPAR_01920 [Clostridium asparagiforme
DSM 15981]
Length = 303
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 19/202 (9%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVA-AAALHVMHAASFIHENLPLSD 127
V E M + + A + P L C L G ++ AA+ ++H +S +H++LP D
Sbjct: 36 VLEAMNYSMKAGGKRLRPMLMQEVCRLFTGDVLDCVIPFMAAVEMIHTSSLVHDDLPCMD 95
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLA-----SSDNPAGNNSGRILRVMV 182
L + KP+ + + + +L DA++ + E A S D + GR + ++
Sbjct: 96 DDRL-RRGKPSTWAEYGEDIGVLTGDALMMYAFETAARAFETSIDPDEISAIGRSIGILA 154
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
T G+ G++ GQ +++ + D KL+ I Y+ K G L GA
Sbjct: 155 HKT---GAFGMIGGQTVDVELAGSDIPRDKLDFI---------YRLKTGALLEASMLIGA 202
Query: 243 ILGGGSEKEIELLRRYGFYVGM 264
+LGG +E++ +++ R ++GM
Sbjct: 203 VLGGAAEEDCKIVERLASHIGM 224
>gi|418698416|ref|ZP_13259393.1| polyprenyl synthetase [Leptospira interrogans serovar Bataviae str.
L1111]
gi|410762559|gb|EKR28720.1| polyprenyl synthetase [Leptospira interrogans serovar Bataviae str.
L1111]
Length = 313
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 96/204 (47%), Gaps = 5/204 (2%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
E++E M++ + A + P L +AA + + ++ A+L +H S IH++LP D
Sbjct: 36 ELFEAMKYSLVAGGKRLRPVLALAAFGGLQNETQNVLLLGASLECIHTYSLIHDDLPSMD 95
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
+ PT++ F +T +L DA+ F ++ G++ + R ++E+ A
Sbjct: 96 NDDF-RRGLPTLHKKFSESTAILAGDALNSFAFYFISWIRVENGDHF--LHRNLLEILHA 152
Query: 188 -MGSQGVVEGQYNELQCSQCDDDDRKLNGITD-VEMTYETYKKKEGRLHACGAACGAILG 245
G+ G+V GQ +LQ + + + L +D +EM T++ K G L G L
Sbjct: 153 GCGAPGMVSGQVYDLQMERENVKENDLTNQSDKIEMLQLTHRLKTGALIKSALLLGNRLR 212
Query: 246 GGSEKEIELLRRYGFYVGMIQGIV 269
+K L +YG +G++ I
Sbjct: 213 KDWKKRETSLSQYGEDLGLLFQIT 236
>gi|68171692|ref|ZP_00545051.1| Polyprenyl synthetase [Ehrlichia chaffeensis str. Sapulpa]
gi|88657808|ref|YP_507273.1| putative geranyltranstransferase [Ehrlichia chaffeensis str.
Arkansas]
gi|67998884|gb|EAM85577.1| Polyprenyl synthetase [Ehrlichia chaffeensis str. Sapulpa]
gi|88599265|gb|ABD44734.1| putative geranyltranstransferase [Ehrlichia chaffeensis str.
Arkansas]
Length = 267
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 91/192 (47%), Gaps = 18/192 (9%)
Query: 73 MRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLI 132
MR+ +FA ++ P L A+ ++ + ++ + +AA+ ++H S IH++LP D + I
Sbjct: 28 MRYSMFAPGKHIRPFLVNASAQIFNVNVDRILPVSAAVEIIHVYSLIHDDLPGIDNEN-I 86
Query: 133 PKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE-MTRAMGSQ 191
+ + + + F +L DA+L E+L++ D S I M++ + +A+G Q
Sbjct: 87 RRGQASSHKKFNEAIAILTGDALLTLAFEILSTID-----ESPFIRCCMIKALAKALGYQ 141
Query: 192 GVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKE 251
G+++GQ + + D +D + + K + + G ILG S E
Sbjct: 142 GMIQGQILDTETIAKDTNDIQ-----------AIHVLKTAQFFSVACELGGILGNASNIE 190
Query: 252 IELLRRYGFYVG 263
+ L YG +G
Sbjct: 191 LNALANYGLNLG 202
>gi|395767714|ref|ZP_10448247.1| hypothetical protein MCS_01180 [Bartonella doshiae NCTC 12862]
gi|395414077|gb|EJF80530.1| hypothetical protein MCS_01180 [Bartonella doshiae NCTC 12862]
Length = 300
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 12/230 (5%)
Query: 59 QAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASF 118
Q + P + + MRH V + P L + + L E A+ A AL +H S
Sbjct: 28 QKSEIARPEILIKAMRHGVLNGGKRLRPFLVIQSASLFDIPAEHALEIACALECVHCYSL 87
Query: 119 IHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRIL 178
IH++LP D +L + KPT++ AF T +L +A+L F E++A + RI
Sbjct: 88 IHDDLPAMDNDTL-RRGKPTVHIAFDEATAILAGNALLTFAFEIIAHKAYMLSFET-RI- 144
Query: 179 RVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGA 238
+++ + +A G G++ GQ +L+ ++K TD+ +T + K AC A
Sbjct: 145 KLITALAQAAGLGGMLGGQMLDLEA------EKKPLESTDI-ITLQRMKTAALISFACQA 197
Query: 239 ACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GAI+G S++ E L +G Y+G+ + L T + E L K A K
Sbjct: 198 --GAIIGNASKELTEKLAAFGTYLGLAFQLTDDLLDVTAKTETLGKTAGK 245
>gi|218264432|ref|ZP_03478283.1| hypothetical protein PRABACTJOHN_03979 [Parabacteroides johnsonii
DSM 18315]
gi|218222005|gb|EEC94655.1| hypothetical protein PRABACTJOHN_03979 [Parabacteroides johnsonii
DSM 18315]
Length = 324
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 21/200 (10%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL-P 124
P +YEP+ + + + PAL + AC L + + AI A L V H + +H++L
Sbjct: 24 PKSLYEPIEYILSLGGKRIRPALVLMACNLYKENVDIAIKPALGLEVFHNFTLLHDDLMD 83
Query: 125 LSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEM 184
+D+ ++KPT++ + NT +L DAML +L+ + S + ++
Sbjct: 84 EADKR----RNKPTVHKVWNDNTAILSGDAMLIAAYQLIGET------KSESLKEILDLF 133
Query: 185 TRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAIL 244
TR + + GQ +++ D +T+ E E + K L AC GAI+
Sbjct: 134 TRT--ALEICGGQQYDMEFESRTD-------VTEAEYI-EMIRLKTAVLLACALKMGAIM 183
Query: 245 GGGSEKEIELLRRYGFYVGM 264
G E + E L ++G +G+
Sbjct: 184 GNAPEADAEALYQFGINIGL 203
>gi|45656187|ref|YP_000273.1| farnesyl-diphosphate synthase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45599421|gb|AAS68910.1| geranyltranstransferase [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
Length = 332
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 96/204 (47%), Gaps = 5/204 (2%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
E++E M++ + A + P L +AA + + ++ A+L +H S IH++LP D
Sbjct: 55 ELFEAMKYSLVAGGKRLRPVLALAAFGGLQNETQNVLLLGASLECIHTYSLIHDDLPSMD 114
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
+ PT++ F +T +L DA+ F ++ G++ + R ++E+ A
Sbjct: 115 NDDF-RRGLPTLHKKFSESTAILAGDALNSFAFYFISWIRVENGDHF--LHRNLLEILHA 171
Query: 188 -MGSQGVVEGQYNELQCSQCDDDDRKLNGITD-VEMTYETYKKKEGRLHACGAACGAILG 245
G+ G+V GQ +LQ + + + L +D +EM T++ K G L G L
Sbjct: 172 GCGAPGMVSGQVYDLQMERENVKENDLTNQSDKIEMLQLTHRLKTGALIKSALLLGNRLR 231
Query: 246 GGSEKEIELLRRYGFYVGMIQGIV 269
+K L +YG +G++ I
Sbjct: 232 KDWKKRETSLSQYGEDLGLLFQIT 255
>gi|325957123|ref|YP_004292535.1| Geranyltranstransferase [Lactobacillus acidophilus 30SC]
gi|385817909|ref|YP_005854299.1| geranyltranstransferase [Lactobacillus amylovorus GRL1118]
gi|325333688|gb|ADZ07596.1| Geranyltranstransferase [Lactobacillus acidophilus 30SC]
gi|327183847|gb|AEA32294.1| Geranyltranstransferase [Lactobacillus amylovorus GRL1118]
Length = 289
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 81/164 (49%), Gaps = 14/164 (8%)
Query: 43 KSYWTSVHED-IGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHRE 101
K WT V +D + HL V K+ + + M + V A + P L +A +G E
Sbjct: 8 KDDWTPVIDDYLAKHLADEVDSKK---ISQTMSYSVMAGGKRLRPLLFLATLNALGKKIE 64
Query: 102 Q-AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGL 160
+ I A + ++H S IH++LP D + K T + + +L DA+LP G+
Sbjct: 65 EPEIRIACGIELIHTYSLIHDDLPAMDNDDY-RRGKLTSHKKWGEAEAILAGDALLPLGI 123
Query: 161 ELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCS 204
+ +A G+NS ++++ +T+A+G G+V GQY ++ +
Sbjct: 124 QWIAQ-----GSNSAELVKI---ITQAVGPNGMVGGQYLDIDST 159
>gi|345882221|ref|ZP_08833727.1| hypothetical protein HMPREF9431_02391 [Prevotella oulorum F0390]
gi|343918184|gb|EGV28954.1| hypothetical protein HMPREF9431_02391 [Prevotella oulorum F0390]
Length = 323
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
++P E+Y P+++ + + P L + L G EQ ++ A + H + +H++
Sbjct: 21 RKPSELYAPVKYVLSMGGKRIRPVLMLLGYGLYGEDYEQVLMPACGIETYHNYTLLHDD- 79
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE 183
L D + + KPT++ + N +L D+ML E +A PA + +L+V E
Sbjct: 80 -LMDHAEM-RRGKPTVHCKWNANAAILSGDSMLVLAYERIAQC--PA-KHLASVLKVFTE 134
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAI 243
+G EGQ ++ Q DD +T+ E E + K L AC GAI
Sbjct: 135 TALEIG-----EGQQYDMDFEQRDD-------VTEAEYI-EMIRLKTSVLLACALKIGAI 181
Query: 244 LGGGSEKEIELLRRYGFYVGM 264
LG ++ E L ++G +G+
Sbjct: 182 LGEAPTEDQENLYKFGEQIGL 202
>gi|300024283|ref|YP_003756894.1| polyprenyl synthetase [Hyphomicrobium denitrificans ATCC 51888]
gi|299526104|gb|ADJ24573.1| Polyprenyl synthetase [Hyphomicrobium denitrificans ATCC 51888]
Length = 301
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 94/198 (47%), Gaps = 8/198 (4%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P + + +RH V A P L + L G R+ A+ AAAAL +H S +H++LP
Sbjct: 32 PPRLADALRHAVLAGGKRFRPFLVFESAGLFGVARDAALPAAAALECIHCYSLVHDDLPA 91
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D L + +PT++ A+ T +LV DA+ EL +SD +++ + +
Sbjct: 92 MDNDEL-RRGQPTVWKAYDEWTAILVGDALQAIAFEL--TSDPRRHDDAEARAELTHALA 148
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
A G+ G+V GQ +L+ + D+ I D+ K GRL G GAILG
Sbjct: 149 IASGAIGMVGGQMLDLEAGRL--PDQPAATIADI---VRLQAMKTGRLITVGCEMGAILG 203
Query: 246 GGSEKEIELLRRYGFYVG 263
S + L+ YG ++G
Sbjct: 204 RASPSDRAALKTYGEHLG 221
>gi|62959221|gb|AAY23718.1| farnesyl diphosphate synthase [Synechococcus elongatus CCMP1630]
Length = 145
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 18/157 (11%)
Query: 120 HENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASS-DNPAGNNSGRIL 178
H+++P D L + KPT + + + +L DA+L + E +A + D PA R+L
Sbjct: 1 HDDMPAMDNDDL-RRGKPTNHKVYGEDIAILAGDALLSYAFEYVARTPDIPAE----RLL 55
Query: 179 RVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDV--EMTYETYKKKEGRLHAC 236
+V+V + +A+G++G+V GQ +L+ G TDV E + K G L
Sbjct: 56 QVIVRLGQAVGAEGLVGGQVVDLESE----------GKTDVSVETLNFIHTHKTGALPEV 105
Query: 237 GAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRL 273
GA+L G +E++LL RY +G+ IV L
Sbjct: 106 CVTAGAVLAGAKPEEVQLLSRYAQNIGLAFQIVDDIL 142
>gi|398824185|ref|ZP_10582526.1| geranylgeranyl pyrophosphate synthase [Bradyrhizobium sp. YR681]
gi|398225107|gb|EJN11388.1| geranylgeranyl pyrophosphate synthase [Bradyrhizobium sp. YR681]
Length = 307
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 91/201 (45%), Gaps = 10/201 (4%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + + MR+ + P L V + + G RE A++ AAL +H S IH++
Sbjct: 37 IARPKRLMDAMRYSSLNGGKRLRPFLVVESAAVFGVPREAALLVGAALECIHCYSLIHDD 96
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D + L + +PT++ T +L D +L +++ + D + + R+L +
Sbjct: 97 LPAMDNSDL-RRGRPTLHKKTDDATAILAGDGLLTIAFDIV-TRDEIHRDANVRLL-LTR 153
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+ R G G+V GQ +L + G +++ + K G L G GA
Sbjct: 154 ALARCAGIGGMVGGQILDLAGEG------RFGGNEPIDVA-RIQQMKTGALLRYGCVAGA 206
Query: 243 ILGGGSEKEIELLRRYGFYVG 263
+LG S+ E + L YG +G
Sbjct: 207 LLGEASKAEYQALDDYGRALG 227
>gi|268324511|emb|CBH38099.1| bifunctional short chain isoprenyl diphosphate synthase [uncultured
archaeon]
Length = 343
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 81/182 (44%), Gaps = 24/182 (13%)
Query: 84 MAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAF 143
+ P LC+ + E VGG RE+A+ A A+ ++H AS +H+++ + S P MY
Sbjct: 48 LRPILCLLSAEAVGGSREKAMTTAIAIELLHNASLVHDDIIDDNYVRRKSPSNPAMYGEK 107
Query: 144 KPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQC 203
K +++ D + E+LA P V+ ++ A+ + G+Y E
Sbjct: 108 KA---IVIGDFLFGISCEMLAKCGVP---------EVVGLVSSAVSD--IAMGEYLEFSL 153
Query: 204 SQCDDDDRKLNGITDVEMTY-ETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYV 262
R L T E +Y E K A GA+LGGGSE EI R YG V
Sbjct: 154 -------RTLQETT--EQSYMEVATLKTASTFMASAEAGAMLGGGSEAEIANFRNYGKNV 204
Query: 263 GM 264
G+
Sbjct: 205 GI 206
>gi|71908673|ref|YP_286260.1| farnesyl-diphosphate synthase [Dechloromonas aromatica RCB]
gi|71848294|gb|AAZ47790.1| farnesyl-diphosphate synthase [Dechloromonas aromatica RCB]
Length = 297
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 4/136 (2%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++E MR+ + P L AA EL G E + A+ ++HA S +H++LP
Sbjct: 32 PARLHEAMRYATLGGGKRVRPLLAHAAGELTGATPEALDIVGCAVEMIHAYSLVHDDLPC 91
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D ++ + +PT + F T LLV D++ ELLAS P G + L ++ +
Sbjct: 92 MD-DDVLRRGRPTCHVEFDEPTALLVGDSLQTMAFELLAS--QPLGEPKQQ-LEIIALLA 147
Query: 186 RAMGSQGVVEGQYNEL 201
A GS+G+ GQ +L
Sbjct: 148 HASGSRGMAGGQAIDL 163
>gi|269217208|ref|ZP_06161062.1| short chain isoprenyl diphosphate synthase [Slackia exigua ATCC
700122]
gi|269129345|gb|EEZ60430.1| short chain isoprenyl diphosphate synthase [Slackia exigua ATCC
700122]
Length = 353
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 27/203 (13%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
+Y P+ + P +C+AAC VGG +A+ +AAA+ H A+ IH++ ++D
Sbjct: 53 LYAPLLGYSRNGGKRHRPLICLAACVAVGGDVRRAVSSAAAIEHFHTAALIHDD--IADE 110
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASS--DNPAGNNS--GRILRVMVEM 184
+L + +P ++ L +A M GL L+ + +P + R++ ++EM
Sbjct: 111 ATL-RRGEPCLH----LTQGLGLAINMGDLGLSLVNGTVVRDPLLEDGVKVRVIAELIEM 165
Query: 185 TRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGA---ACG 241
TR +EGQ +L ++ D + + + + T+K H GA A G
Sbjct: 166 TRR-----TIEGQALDLGWAR----DERYDITPEDYLVMATHKTA----HYSGAVPLAVG 212
Query: 242 AILGGGSEKEIELLRRYGFYVGM 264
AI+GGGSE EIE LR YG G+
Sbjct: 213 AIVGGGSEAEIEGLRAYGLDTGL 235
>gi|421541604|ref|ZP_15987721.1| geranyltranstransferase [Neisseria meningitidis NM255]
gi|402319973|gb|EJU55477.1| geranyltranstransferase [Neisseria meningitidis NM255]
Length = 298
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 75/147 (51%), Gaps = 9/147 (6%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P ++E MR+ + P L +AA EL E A AA+ ++HA S +H+++P
Sbjct: 33 PHTLHEAMRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEMIHAYSLVHDDMPT 92
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D SL + KPT + + T LLV DA+ ++LA P+G + R L ++ +
Sbjct: 93 MDNDSL-RRGKPTCHVKYGEATALLVGDALQTQAFDVLA---RPSGLPASRQLAMLSVLA 148
Query: 186 RAMGSQGVVEGQYNEL-----QCSQCD 207
+A GS+G+ GQ +L Q +Q D
Sbjct: 149 KAGGSRGMAGGQAIDLANVGKQMAQTD 175
>gi|417760480|ref|ZP_12408502.1| polyprenyl synthetase [Leptospira interrogans str. 2002000624]
gi|417774569|ref|ZP_12422433.1| polyprenyl synthetase [Leptospira interrogans str. 2002000621]
gi|417784991|ref|ZP_12432696.1| polyprenyl synthetase [Leptospira interrogans str. C10069]
gi|418668367|ref|ZP_13229769.1| polyprenyl synthetase [Leptospira interrogans serovar Pyrogenes
str. 2006006960]
gi|418672828|ref|ZP_13234162.1| polyprenyl synthetase [Leptospira interrogans str. 2002000623]
gi|418691118|ref|ZP_13252223.1| polyprenyl synthetase [Leptospira interrogans str. FPW2026]
gi|418709470|ref|ZP_13270261.1| polyprenyl synthetase [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|421087473|ref|ZP_15548309.1| polyprenyl synthetase [Leptospira santarosai str. HAI1594]
gi|421104548|ref|ZP_15565143.1| polyprenyl synthetase [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|421124759|ref|ZP_15585016.1| polyprenyl synthetase [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421134754|ref|ZP_15594885.1| polyprenyl synthetase [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|400359691|gb|EJP15674.1| polyprenyl synthetase [Leptospira interrogans str. FPW2026]
gi|409943666|gb|EKN89261.1| polyprenyl synthetase [Leptospira interrogans str. 2002000624]
gi|409951780|gb|EKO06294.1| polyprenyl synthetase [Leptospira interrogans str. C10069]
gi|410020980|gb|EKO87774.1| polyprenyl synthetase [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410366000|gb|EKP21393.1| polyprenyl synthetase [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410429722|gb|EKP74097.1| polyprenyl synthetase [Leptospira santarosai str. HAI1594]
gi|410437890|gb|EKP86989.1| polyprenyl synthetase [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|410575411|gb|EKQ38429.1| polyprenyl synthetase [Leptospira interrogans str. 2002000621]
gi|410580196|gb|EKQ48023.1| polyprenyl synthetase [Leptospira interrogans str. 2002000623]
gi|410755876|gb|EKR17504.1| polyprenyl synthetase [Leptospira interrogans serovar Pyrogenes
str. 2006006960]
gi|410770416|gb|EKR45638.1| polyprenyl synthetase [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|455788651|gb|EMF40619.1| polyprenyl synthetase [Leptospira interrogans serovar Lora str. TE
1992]
gi|456824167|gb|EMF72604.1| polyprenyl synthetase [Leptospira interrogans serovar Canicola str.
LT1962]
Length = 313
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 96/204 (47%), Gaps = 5/204 (2%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
E++E M++ + A + P L +AA + + ++ A+L +H S IH++LP D
Sbjct: 36 ELFEAMKYSLVAGGKRLRPVLALAAFGGLQNETQNVLLLGASLECIHTYSLIHDDLPSMD 95
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
+ PT++ F +T +L DA+ F ++ G++ + R ++E+ A
Sbjct: 96 NDDF-RRGLPTLHKKFSESTAILAGDALNSFAFYFISWIRVENGDHF--LHRNLLEILHA 152
Query: 188 -MGSQGVVEGQYNELQCSQCDDDDRKLNGITD-VEMTYETYKKKEGRLHACGAACGAILG 245
G+ G+V GQ +LQ + + + L +D +EM T++ K G L G L
Sbjct: 153 GCGAPGMVSGQVYDLQMERENVKENDLTNQSDKIEMLQLTHRLKTGALIKSALLLGNRLR 212
Query: 246 GGSEKEIELLRRYGFYVGMIQGIV 269
+K L +YG +G++ I
Sbjct: 213 KDWKKRETSLSQYGEDLGLLFQIT 236
>gi|290955843|ref|YP_003487025.1| polyprenyl synthatase [Streptomyces scabiei 87.22]
gi|260645369|emb|CBG68455.1| putative polyprenyl synthatase [Streptomyces scabiei 87.22]
Length = 350
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 83/189 (43%), Gaps = 19/189 (10%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
PAL V + E+ G E I A A+ ++H S +H++L D + + T++ P
Sbjct: 65 PALAVMSAEVTGAAPEAGIPGAVAVELVHNFSLLHDDLMDGDEQR---RHRDTVWKVHGP 121
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
+LV DA++ E+L + R R + TRA+ ++GQ ++
Sbjct: 122 AQAILVGDALMVLANEILLELGTV---EAARATRRVTTATRAL-----IDGQAQDISYEH 173
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
+ VE E K G L AC + GA+LGG + + L +YG+++G+
Sbjct: 174 RER--------VTVEECLEMEGNKTGALLACACSIGAVLGGADDHTADTLEKYGYHLGLA 225
Query: 266 QGIVSRRLG 274
V LG
Sbjct: 226 FQAVDDLLG 234
>gi|402829077|ref|ZP_10877958.1| polyprenyl synthetase [Slackia sp. CM382]
gi|402284831|gb|EJU33324.1| polyprenyl synthetase [Slackia sp. CM382]
Length = 358
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 27/203 (13%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
+Y P+ + P +C+AAC VGG +A+ +AAA+ H A+ IH++ ++D
Sbjct: 58 LYAPLLGYSRNGGKRHRPLICLAACVAVGGDVRRAVSSAAAIEHFHTAALIHDD--IADE 115
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASS--DNPAGNNS--GRILRVMVEM 184
+L + +P ++ L +A M GL L+ + +P + R++ ++EM
Sbjct: 116 ATL-RRGEPCLH----LTQGLGLAINMGDLGLSLVNGTVVRDPLLEDGVKVRVIAELIEM 170
Query: 185 TRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGA---ACG 241
TR +EGQ +L ++ D + + + + T+K H GA A G
Sbjct: 171 TRR-----TIEGQALDLGWAR----DERYDITPEDYLVMATHKTA----HYSGAVPLAVG 217
Query: 242 AILGGGSEKEIELLRRYGFYVGM 264
AI+GGGSE EIE LR YG G+
Sbjct: 218 AIVGGGSEAEIEGLRAYGLDTGL 240
>gi|320108147|ref|YP_004183737.1| polyprenyl synthetase [Terriglobus saanensis SP1PR4]
gi|319926668|gb|ADV83743.1| Polyprenyl synthetase [Terriglobus saanensis SP1PR4]
Length = 309
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 97/231 (41%), Gaps = 18/231 (7%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIV-AAAALHVMHAASFIHENLP 124
P ++ MR+ VFA + P LC+ A +V G I +AL ++H S IH++LP
Sbjct: 34 PHSIHRSMRYSVFAGGKRLRPILCMEAGRMVAGKLPAGIADLGSALEMLHTYSLIHDDLP 93
Query: 125 LSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEM 184
D L + KPT + F +L DA+ F E L+ PA I + +
Sbjct: 94 SFDDDDL-RRGKPTSHIVFGEAIAILTGDALQTFAYETLSRLSCPAEATVQIIREIAIAT 152
Query: 185 TRAMGSQ-------GVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACG 237
+G G++ GQ +++ +++ I ++ K G L
Sbjct: 153 GTGVGPTDGTGLPYGMIGGQVLDIEGEGTKPTAEQVDRI---------HRAKTGALITTS 203
Query: 238 AACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
G I G S + +E LR +G G+ IV L T+ E+L K A K
Sbjct: 204 IVTGGIFAGASAETVEHLRLFGQRAGLAFQIVDDVLDMTQSSEDLGKTAGK 254
>gi|194366666|ref|YP_002029276.1| polyprenyl synthetase [Stenotrophomonas maltophilia R551-3]
gi|194349470|gb|ACF52593.1| Polyprenyl synthetase [Stenotrophomonas maltophilia R551-3]
Length = 292
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 98/228 (42%), Gaps = 18/228 (7%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P +++ MR+ V M P L A+ +L G E AA A+ ++HA S +H++
Sbjct: 26 AEAPQRLHQAMRYSVLGGGKRMRPLLVYASGQLFGAQPESLDAAAMAVELIHAYSLVHDD 85
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRV-- 180
LP D +L + KPT + AF T +L DA+ LLA + PA LRV
Sbjct: 86 LPAMDDDAL-RRGKPTTHIAFDEATAILAGDALQTRAFGLLADAPLPA------TLRVAC 138
Query: 181 MVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAAC 240
+ + A G+ G+ GQ ++ + + L +T + K G L
Sbjct: 139 LQTLAHASGASGMCGGQALDIDAT---GQQQTLAALT------RMHALKTGALIRAAVRM 189
Query: 241 GAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
GA+ G E ++ L + +G+ + L E+L K A K
Sbjct: 190 GALCGQAHEPQLAQLDSFADALGLAFQVRDDILDVEASSEQLGKTAGK 237
>gi|114563954|ref|YP_751468.1| polyprenyl synthetase [Shewanella frigidimarina NCIMB 400]
gi|114335247|gb|ABI72629.1| farnesyl-diphosphate synthase [Shewanella frigidimarina NCIMB 400]
Length = 293
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 14/213 (6%)
Query: 73 MRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLI 132
M H + P L + +++G + AAAA+ +HA S IH++LP D +L
Sbjct: 35 MLHGALLGGKRIRPFLVYSVGDMLGVNINALDKAAAAIECIHAYSLIHDDLPAMDNDAL- 93
Query: 133 PKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE-MTRAMGSQ 191
+ +PT++ AF T +L DA+ E++ + P + + MV + +A G Q
Sbjct: 94 RRGQPTVHIAFDEATAILAGDALQTLAFEIITA---PCNDLHPKQQLAMVRVLAKASGYQ 150
Query: 192 GVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKE 251
G+ GQ +L + D +N ++ E + KK G L +C I ++
Sbjct: 151 GMCGGQAIDLSAT-----DHSIN----LDRLTELHNKKTGALISCAVELALIAADVPDEH 201
Query: 252 IELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
+L+ +Y +G+ + L T EEL K
Sbjct: 202 YKLMMKYAHTLGLAFQVQDDILDITASTEELGK 234
>gi|62959179|gb|AAY23697.1| farnesyl diphosphate synthase [Bacillus sp. JL-39]
gi|62959189|gb|AAY23702.1| farnesyl diphosphate synthase [Kocuria sp. JL-51]
gi|62959199|gb|AAY23707.1| farnesyl diphosphate synthase [Rhodococcus sp. JL-61]
gi|73811207|gb|AAY23722.1| farnesyl diphosphate synthase [Sagittula sp. JL-351]
Length = 145
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 120 HENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASS-DNPAGNNSGRIL 178
H++LP D L + KPT + + + +L DA+L + E +A + D PA R+L
Sbjct: 1 HDDLPGMDNDDL-RRGKPTNHKVYGEDIAILAGDALLSYAFEYVARTPDIPAE----RLL 55
Query: 179 RVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGA 238
+V+V + +A+G++G+V GQ +L+ D VE + K G L
Sbjct: 56 QVIVRLGQAVGAEGLVGGQVVDLESEGKTD--------VSVETLNFIHTHKTGALLEVCV 107
Query: 239 ACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRL 273
GA+L G +E++LL RY +G+ IV L
Sbjct: 108 TAGAVLAGAKPEEVQLLSRYAQNIGLAFQIVDDIL 142
>gi|225873275|ref|YP_002754734.1| geranylgeranyl diphosphate synthase [Acidobacterium capsulatum ATCC
51196]
gi|225791637|gb|ACO31727.1| geranylgeranyl diphosphate synthase [Acidobacterium capsulatum ATCC
51196]
Length = 300
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 100/228 (43%), Gaps = 20/228 (8%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAA-----AALHVMHAASFIH 120
P ++ +RH FA + P L + A + R++A+ A AA+ ++H S IH
Sbjct: 33 PSSIHRAIRHSTFAGGKRLRPVLAMEAARTL--RRDRALPAGVEDLGAAIEMLHTYSLIH 90
Query: 121 ENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRV 180
++LP D L + KPT + F +L DA+ + LA PA + I+R+
Sbjct: 91 DDLPALDNDDL-RRGKPTCHVVFGEAIAILAGDALQTLAYQTLAQLRCPA-PATVEIIRL 148
Query: 181 MVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAAC 240
+ E T + +G++ GQ +L+ ++ I ++ K G L
Sbjct: 149 IAEATGTV--EGMIGGQVLDLEGEGTRPTAESVDAI---------HRAKTGALIRVSIVT 197
Query: 241 GAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
G + G + +++E L +G G+ IV L T++ L K A K
Sbjct: 198 GGVYAGATPEDVERLTIFGRKAGLAFQIVDDVLDMTQDSAHLGKTAGK 245
>gi|23502633|ref|NP_698760.1| geranyltranstransferase [Brucella suis 1330]
gi|161619701|ref|YP_001593588.1| polyprenyl synthetase [Brucella canis ATCC 23365]
gi|260568852|ref|ZP_05839320.1| polyprenyl synthetase [Brucella suis bv. 4 str. 40]
gi|261754180|ref|ZP_05997889.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686]
gi|376275626|ref|YP_005116065.1| polyprenyl synthetase [Brucella canis HSK A52141]
gi|376281428|ref|YP_005155434.1| geranyltranstransferase [Brucella suis VBI22]
gi|384225420|ref|YP_005616584.1| geranyltranstransferase [Brucella suis 1330]
gi|23348639|gb|AAN30675.1| geranyltranstransferase [Brucella suis 1330]
gi|161336512|gb|ABX62817.1| Polyprenyl synthetase [Brucella canis ATCC 23365]
gi|260154236|gb|EEW89318.1| polyprenyl synthetase [Brucella suis bv. 4 str. 40]
gi|261743933|gb|EEY31859.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686]
gi|343383600|gb|AEM19092.1| geranyltranstransferase [Brucella suis 1330]
gi|358259027|gb|AEU06762.1| geranyltranstransferase [Brucella suis VBI22]
gi|363404193|gb|AEW14488.1| polyprenyl synthetase [Brucella canis HSK A52141]
Length = 304
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 12/202 (5%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + MRH V + P L + + L G + + + AAAL +H S +H++
Sbjct: 36 IARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQYGQAVLRVAAALECIHCYSLVHDD 95
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D L + +PT++ AF +L D++L + +++A SD + + RI +++
Sbjct: 96 LPAMDDDDL-RRGQPTVHKAFDEAAAILAGDSLLTYAFDIIA-SDETELDATTRI-KLVC 152
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+TRA G G+ GQ +L D+ + +T + K AC A GA
Sbjct: 153 ALTRASGLGGMAGGQALDLMAETRKPDEASI-------ITLQAMKTGALIRFACEA--GA 203
Query: 243 ILGGGSEKEIELLRRYGFYVGM 264
I+ G S+++ E + +G +G+
Sbjct: 204 IIAGASQEDRERMAEFGSAIGL 225
>gi|307611173|emb|CBX00817.1| hypothetical protein LPW_25211 [Legionella pneumophila 130b]
Length = 298
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 14/222 (6%)
Query: 46 WTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIV 105
+T HE L +V+ P ++ + + +F+ + P L A +L+ +E +
Sbjct: 9 YTQRHELYLEQLLNEIVIPAP-QIRSALHYALFSGGKRIRPILVYLAGDLIDVDQEVLDI 67
Query: 106 AAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLAS 165
AAAL + H S IH++LP D L + KP+ + AF T +LV D M +E++
Sbjct: 68 IAAALELTHCYSLIHDDLPAMDNDDL-RRGKPSCHKAFDEATAILVGDGMQALAIEVVLM 126
Query: 166 SDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNEL-QCSQCDDDDRKLNGITDVEMTYE 224
+P + +++ + + A G G+V GQ +L + ++ + +L GI
Sbjct: 127 RLSPL-LPAAQVVAITQVLVNASGISGMVSGQSLDLSELAKSSVTEEQLRGI-------- 177
Query: 225 TYKKKEGRL-HACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
+ K G+L AC A SE+ LR YG ++G++
Sbjct: 178 -HLLKTGKLILACFEMVLAAQHEVSEQIKSALRTYGKHIGLV 218
>gi|429211674|ref|ZP_19202839.1| geranyltranstransferase [Pseudomonas sp. M1]
gi|428156156|gb|EKX02704.1| geranyltranstransferase [Pseudomonas sp. M1]
Length = 295
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 98/199 (49%), Gaps = 16/199 (8%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
+Y MR+ V + P L AACE +GG +A AA A+ ++HA S +H++LP D
Sbjct: 31 LYRAMRYSVVNGGKRVRPLLAYAACEALGGDPARADGAACAVELIHAYSLVHDDLPAMDD 90
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD-NPAGNNSGRILRVMVEMTRA 187
L + +PT + AF +L D + E+LA + NP ++ L ++ + RA
Sbjct: 91 DDL-RRGQPTTHIAFDEACAILAGDGLQALAFEVLAEARLNP--QDAETRLAMVTALARA 147
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYET-YKKKEGRLHACGAACGAILGG 246
GS G+V GQ +L+ R+++ + ET ++ K G L GA+ G
Sbjct: 148 AGSAGMVGGQAIDLEAV-----GRRID-----QAALETMHRHKTGALIEASVRLGALASG 197
Query: 247 GSEKE-IELLRRYGFYVGM 264
++ E +E L RY +G+
Sbjct: 198 QADAERLEALARYAGAIGL 216
>gi|429727348|ref|ZP_19262122.1| putative geranyltranstransferase [Peptostreptococcus anaerobius VPI
4330]
gi|429152800|gb|EKX95610.1| putative geranyltranstransferase [Peptostreptococcus anaerobius VPI
4330]
Length = 295
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 15/204 (7%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
++E M + + A + P L + A +L G E + + A+ ++H S IH++LP D
Sbjct: 32 IFEAMNYSLRAGGKRLRPILLMEAYKLCQGQGEDFVPYSVAMEMIHTYSLIHDDLPALDN 91
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELL--ASSDNPAGNNSGRILRVMVEMTR 186
L + KPT + F +L DA+L E + A+ +P S LR E++R
Sbjct: 92 DDL-RRGKPTNHIVFGEAMAILAGDALLNTAYETMLNATFKHPRPELS---LRAAYEISR 147
Query: 187 AMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGG 246
G G++ GQ +++ +D+K+N ++ Y + K + GAIL G
Sbjct: 148 GAGIYGMIGGQVVDVES-----EDKKINK---DKLDY-IHMNKTAAMIVGSVRAGAILAG 198
Query: 247 GSEKEIELLRRYGFYVGMIQGIVS 270
E +E L +Y +G+ IV
Sbjct: 199 IDEDRLESLTKYAENIGLAFQIVD 222
>gi|373115249|ref|ZP_09529425.1| hypothetical protein HMPREF0995_00261 [Lachnospiraceae bacterium
7_1_58FAA]
gi|371670541|gb|EHO35620.1| hypothetical protein HMPREF0995_00261 [Lachnospiraceae bacterium
7_1_58FAA]
Length = 293
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
+Y+ MR+ + + P L + AC L GG E A+ A A+ ++H S IH++LP D
Sbjct: 31 LYDAMRYSLLTGGKRLRPVLVLEACRLCGGAVEDALPFAGAIEMVHTYSLIHDDLPCMDD 90
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
L + +PT + F +L D +L E + + R+L + RA
Sbjct: 91 DDL-RRGRPTNHKVFGEANAVLAGDGLLTAAFETMLAPGQKLPPE--RVLEAAGILARAA 147
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
G +G+V GQ ++ + R L G+T+VE E + K G L G + GG+
Sbjct: 148 GGRGMVGGQVLDMA-----GEGRAL-GLTEVE---ELQRLKTGALIRAAVEMGCAVAGGA 198
Query: 249 EKEIELLRRYGFYVGM 264
E++ E L RY +G+
Sbjct: 199 EEQREALCRYADCLGL 214
>gi|423202732|ref|ZP_17189311.1| hypothetical protein HMPREF1167_02894 [Aeromonas veronii AER39]
gi|404614928|gb|EKB11907.1| hypothetical protein HMPREF1167_02894 [Aeromonas veronii AER39]
Length = 296
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
P L A E++G E AAA+ +HA S +H++LP D L + +PT++ AF
Sbjct: 49 PFLVYAVGEMLGVKSELLDGPAAAVECIHAYSLLHDDLPAMDNDDL-RRGQPTVHKAFDE 107
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
T +L DA+ +LA P + R+ R++ + RA G G+ GQ +LQ
Sbjct: 108 GTAILAGDALQTLAFSILADHPMPDALMANRV-RMLSTLARASGYLGMCGGQALDLQA-- 164
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG-SEKEIELLRRYGFYVGM 264
+ R++ +T++E + ++ K G L C A GA+ + + L+ Y +G+
Sbjct: 165 ---EGRQIT-LTELE---QVHRHKTGALIECAVALGALCKADVDDATLAALQTYAAAIGL 217
Query: 265 IQGIVSRRLGPTEEIEELKK 284
+ L T + L K
Sbjct: 218 AFQVQDDILDITGDTATLGK 237
>gi|126653065|ref|ZP_01725200.1| YqiD [Bacillus sp. B14905]
gi|126590166|gb|EAZ84290.1| YqiD [Bacillus sp. B14905]
Length = 293
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 104/220 (47%), Gaps = 17/220 (7%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ PV++ + M + + A + P +A EL + + ++ + + ++H S IH++
Sbjct: 27 IDAPVDLKDSMLYSLKAGGKRIRPLFVLAVLELYQKNLQDGLIVGSVIEIIHTYSLIHDD 86
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D + KPT + + L DA+ +LA + A RI V +
Sbjct: 87 LPSMDNDDF-RRGKPTNHKVYGEALATLAGDALNTLAFGILARMEVTA---EKRIELVQL 142
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
++ A G++G+V GQ +++ Q R+L+ +T++E + + K G L GA
Sbjct: 143 -LSVAAGAEGMVGGQVLDMEGEQ-----RQLD-LTELE---QVHVNKTGALLRFSIEAGA 192
Query: 243 ILGGGSEKEIELLRRYGFYVGM---IQGIVSRRLGPTEEI 279
+L S+++ L+ Y ++G+ IQ + G TEE+
Sbjct: 193 VLADASKQDRATLKEYAHHIGLAFQIQDDILDIEGTTEEL 232
>gi|293376580|ref|ZP_06622808.1| geranyltranstransferase [Turicibacter sanguinis PC909]
gi|325839379|ref|ZP_08166818.1| geranyltranstransferase [Turicibacter sp. HGF1]
gi|292644806|gb|EFF62888.1| geranyltranstransferase [Turicibacter sanguinis PC909]
gi|325490499|gb|EGC92815.1| geranyltranstransferase [Turicibacter sp. HGF1]
Length = 291
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P E+ E M + + + P L A E ++ AAAL ++H S IH++LP
Sbjct: 27 PSELKESMLYSLKVGGKRLRPILLFAVLESFNLAPQKGYHVAAALEMIHTYSLIHDDLPA 86
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D +L + KPT + F T +L D++L +++A + N L ++ ++
Sbjct: 87 MDDDAL-RRGKPTNHIVFGEATAILAGDSLLTHAFKVIAEDERLTTNQR---LSLIQALS 142
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
A G G+V GQ +++ ++ ++ +E + + K GRL GAI+
Sbjct: 143 LASGPMGMVAGQVLDMEA--------EVKAVS-LEQLKQIHVNKTGRLIEFAIVAGAIIA 193
Query: 246 GGSEKEIELLRRYGFYVGM 264
++ I L+++ +++G+
Sbjct: 194 QADDEVINQLKQFAYHLGL 212
>gi|255524169|ref|ZP_05391129.1| Polyprenyl synthetase [Clostridium carboxidivorans P7]
gi|296186627|ref|ZP_06855029.1| putative geranyltranstransferase [Clostridium carboxidivorans P7]
gi|255512154|gb|EET88434.1| Polyprenyl synthetase [Clostridium carboxidivorans P7]
gi|296048664|gb|EFG88096.1| putative geranyltranstransferase [Clostridium carboxidivorans P7]
Length = 293
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 95/219 (43%), Gaps = 13/219 (5%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
+VYE M + + A + P L + L E+ + A+A+ ++H S IH++LP D
Sbjct: 31 KVYEAMEYSLGAGGKRIRPLLLLLTYMLYKDDFEKVLPIASAVEMIHTYSLIHDDLPCMD 90
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
L + KPT + F +L D +L G+ ++ S N ++ + +
Sbjct: 91 NDDL-RRGKPTNHKVFGEAVAVLAGDGLLNEGMSIMLKS---CMNEQHNFIKACSFIAES 146
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
G++G+V GQ ++ N ++ Y + KK G + GAILG
Sbjct: 147 AGAEGMVGGQTVDILSE---------NTKIPIDQLYYMHSKKTGAIIKASIIAGAILGEA 197
Query: 248 SEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLA 286
+++IE L YG +G+ I L + E L K A
Sbjct: 198 PKRDIENLEYYGQKLGLAFQIKDDILDIVGDTEVLGKKA 236
>gi|315038641|ref|YP_004032209.1| geranyltranstransferase [Lactobacillus amylovorus GRL 1112]
gi|312276774|gb|ADQ59414.1| Geranyltranstransferase [Lactobacillus amylovorus GRL 1112]
Length = 289
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 81/164 (49%), Gaps = 14/164 (8%)
Query: 43 KSYWTSVHED-IGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHRE 101
K WT V +D + HL V K+ + + M + V A + P L +A +G E
Sbjct: 8 KDDWTPVIDDYLARHLADEVDSKK---ISQTMSYSVMAGGKRLRPLLFLATLNALGKKIE 64
Query: 102 Q-AIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGL 160
+ I A + ++H S IH++LP D + K T + + +L DA+LP G+
Sbjct: 65 EPEIRIACGIELIHTYSLIHDDLPAMDNDDY-RRGKLTSHKKWGEAEAILAGDALLPLGI 123
Query: 161 ELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCS 204
+ +A G+NS ++++ +T+A+G G+V GQY ++ +
Sbjct: 124 QWIAQ-----GSNSAELVKI---ITQAVGPNGMVGGQYLDIDST 159
>gi|333985123|ref|YP_004514333.1| geranyltranstransferase [Methylomonas methanica MC09]
gi|333809164|gb|AEG01834.1| Geranyltranstransferase [Methylomonas methanica MC09]
Length = 297
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 2/136 (1%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P +++ MR+ V P L A + +G + + A A+ +H S IH++LP
Sbjct: 30 PQTLHQAMRYTVLDGGKRTRPLLVYATGQALGLNEDVLDGPACAVEFIHVYSLIHDDLPA 89
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D L + KPT + AF T +L DA+ E+LA +D ++G L+++ +T
Sbjct: 90 MDNDDL-RRGKPTCHKAFDEATAILAGDALQALAFEVLA-NDPSILVDAGARLKMIGNLT 147
Query: 186 RAMGSQGVVEGQYNEL 201
+A GSQG+V GQ +L
Sbjct: 148 KASGSQGMVGGQAIDL 163
>gi|86747642|ref|YP_484138.1| polyprenyl synthetase [Rhodopseudomonas palustris HaA2]
gi|86570670|gb|ABD05227.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris HaA2]
Length = 308
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 10/201 (4%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + E +R+ + P L V + + G R A++ AAL +H S IH++
Sbjct: 38 IARPRRLMEAIRYSTLGGGKRLRPFLAVESAAVFGVDRAGALLVGAALECIHCYSLIHDD 97
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D + L + +PT++ A+ T +L DA+L +++ + + ++ L +
Sbjct: 98 LPAMDNSDL-RRGRPTLHKAYDDATAILAGDALLTLAFDII--TRDEVHQDAKVRLDLNR 154
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+ R G G+V GQ +L + DR+ + ++ + K G L G GA
Sbjct: 155 VLARCAGLGGMVGGQMLDL-AGEGRFGDREPVDVARLQ------QMKTGALLRYGCVAGA 207
Query: 243 ILGGGSEKEIELLRRYGFYVG 263
ILG S + + L YG +G
Sbjct: 208 ILGQASPEHYKALDDYGRALG 228
>gi|404449775|ref|ZP_11014763.1| geranylgeranyl pyrophosphate synthase [Indibacter alkaliphilus LW1]
gi|403764622|gb|EJZ25515.1| geranylgeranyl pyrophosphate synthase [Indibacter alkaliphilus LW1]
Length = 328
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 100/223 (44%), Gaps = 19/223 (8%)
Query: 42 NKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHRE 101
K+ + +D+ +H++ + P E+YEP+ + + + P L + A L + E
Sbjct: 3 QKTSVNKILQDLESHIQGYTYGESPKELYEPIAYIMSLGGKRIRPLLTLLAYSLYKENYE 62
Query: 102 QAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLE 161
+A++ AAA+ V H + +H+++ + + + KPT++ + NT +L D ML +
Sbjct: 63 KALIPAAAVEVFHNFTLMHDDIM---DVAPLRRGKPTVHEKWNDNTAILSGDVMLVRAYD 119
Query: 162 LLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEM 221
+L D+ IL + + ++ V EGQ +++ D I
Sbjct: 120 MLLEVDHT-------ILPKCIMLFNQTAAE-VCEGQQHDMNFETMD--------IVGEAA 163
Query: 222 TYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
+ ++K L GAI+ G SEK+ L +G VG+
Sbjct: 164 YLDMIRQKTAVLLGFALQFGAIMAGASEKDSNKLYEFGVNVGI 206
>gi|420264635|ref|ZP_14767263.1| geranyltranstransferase [Enterococcus sp. C1]
gi|394767525|gb|EJF48109.1| geranyltranstransferase [Enterococcus sp. C1]
Length = 306
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 103/223 (46%), Gaps = 22/223 (9%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
KE + +E + + +F + P LC+AA ELV +++ + A A+ ++H S ++L
Sbjct: 33 KEFPDFHEIVDYALFGGGKRLRPMLCLAAGELVNAPKKETLWVATAIEMIHVYSLCQDDL 92
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE 183
P D + K +++ + LL D ++ E++++ +S +I+ +
Sbjct: 93 PSMDNDD-YRRGKKSLHKRYGDTMTLLTCDYLVSRSFEIISN----LQLDSSKIVELSRA 147
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAI 243
++ AMG G+ GQY +L + L+ I + + K G L C G I
Sbjct: 148 LSSAMGLSGLTGGQYLDLH--SLPPQNITLSFIEQLSLL------KTGSLIQCSIIMGGI 199
Query: 244 LGGGSEKE--IELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
G G + + LL YG+ +G+ I+ +++++LK+
Sbjct: 200 CGDGYQNQDISNLLSLYGYNLGLAYQIM-------DDVQDLKQ 235
>gi|221065759|ref|ZP_03541864.1| Polyprenyl synthetase [Comamonas testosteroni KF-1]
gi|220710782|gb|EED66150.1| Polyprenyl synthetase [Comamonas testosteroni KF-1]
Length = 324
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 107/248 (43%), Gaps = 27/248 (10%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L + V + P + E MR+ V + P L AA E VGG + A A+ ++HA
Sbjct: 48 LSRWVGINAPAGLGEAMRYAVLDGGKRLRPLLVWAAAEAVGGQAAATLRAGCAVELIHAY 107
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDN--PAGNNS 174
S +H+++P D ++ + KPT++ F + LL DA+ ELL D+ P +
Sbjct: 108 SLVHDDMPCMDNDTM-RRGKPTVHVQFGEASALLAGDALQALAFELLLPEDDGIPCSMQA 166
Query: 175 GRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLH 234
R+ R+ + A GS G+ GQ +L + +L E ++ K G L
Sbjct: 167 -RLCRL---LGAAAGSHGMAGGQAIDLASVGKQLSETQLR---------EMHRLKTGALL 213
Query: 235 ----ACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLR 290
GAAC A + + L YG +G+ +V L + L K A K
Sbjct: 214 LGSVLMGAACNAQT---DARALAALTDYGQALGVAFQVVDDILDVVADSATLGKTAGK-- 268
Query: 291 EVNSFNDE 298
++ ND+
Sbjct: 269 --DAANDK 274
>gi|163869177|ref|YP_001610429.1| geranyltranstransferase [Bartonella tribocorum CIP 105476]
gi|161018876|emb|CAK02434.1| geranyltranstransferase [Bartonella tribocorum CIP 105476]
Length = 301
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 108/226 (47%), Gaps = 12/226 (5%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + + MR+ V + P L + + L E ++ A AL +H S IH++
Sbjct: 32 ISRPENLIKAMRYGVLNGGKRLRPFLVIQSAALFDIPVEHSLDVACALECVHCYSLIHDD 91
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D ++ + KPT++ F T +L +A+L F E++A N ++ RI +++
Sbjct: 92 LPAMDN-DILRRGKPTVHVEFDEATAILAGNALLTFAFEIIAHKANTLSTDT-RI-KLIT 148
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+ ++ G G++ GQ +L+ ++K TD+ +T + K AC A GA
Sbjct: 149 ALAQSAGLGGMLGGQMLDLEA------EKKPQENTDI-ITLQRMKTAALISFACQA--GA 199
Query: 243 ILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
I+G S++ + L +G Y+G+ + L T + L K A K
Sbjct: 200 IIGNASQELLTKLTAFGSYLGLAFQLTDDLLDVTANTQTLGKTAGK 245
>gi|320157198|ref|YP_004189577.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e [Vibrio vulnificus MO6-24/O]
gi|319932510|gb|ADV87374.1| octaprenyl-diphosphate synthase / dimethylallyltransferase /
geranyltranstransferase (farnesyldiphosphate synthase) /
geranylgeranyl pyrophosphate synthetase [Vibrio
vulnificus MO6-24/O]
Length = 294
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 97/228 (42%), Gaps = 16/228 (7%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
+ + MR+ + P L A E++G +EQ A+A+ +HA S IH++LP D
Sbjct: 30 LIQAMRYGLVLGGKRARPFLVYATGEMLGCSQEQLDTPASAIECIHAYSLIHDDLPAMDD 89
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
L + +PT + F T +L DA+ +LA + R+ + + +A
Sbjct: 90 DEL-RRGQPTCHVKFDEATAILTGDALQTLAFTILAEGTLSPDGETQRVAMIQA-LAQAS 147
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
G+QG+ GQ +L N +E E ++ K G L C GA+ G
Sbjct: 148 GAQGMCIGQALDLAAE---------NRAVTLEELEEIHRNKTGALIRCAVRLGALAAG-- 196
Query: 249 EKEIEL---LRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVN 293
EK + + L +Y +G+ + L + E L K +E+N
Sbjct: 197 EKGLAILPQLEKYSTAIGLAFQVQDDILDIISDTETLGKPQGSDQELN 244
>gi|256820671|ref|YP_003141950.1| polyprenyl synthetase [Capnocytophaga ochracea DSM 7271]
gi|256582254|gb|ACU93389.1| Polyprenyl synthetase [Capnocytophaga ochracea DSM 7271]
Length = 321
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 19/209 (9%)
Query: 56 HLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHA 115
H+ + KEP+ +YEP+++ + + P L + A ++ G +A+ AA A+ V H
Sbjct: 14 HIEKIFTPKEPIHLYEPIQYILNLGGKRIRPLLTLIATDIFGKDYCKALNAATAIEVFHN 73
Query: 116 ASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSG 175
S IH++ + D SL + KPT++ + N +L DAML +LL D P+
Sbjct: 74 FSLIHDD--IMDNASL-RRGKPTVHQKWDTNVGILSGDAMLIIAYKLL--EDYPS----- 123
Query: 176 RILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHA 235
I + +V+ T + + V EGQ Q D D KL ++ +E + K L
Sbjct: 124 EIFQELVK-TLSETALKVCEGQ-------QMDMDFEKLQEVS-IEAYMQMISYKTSVLIG 174
Query: 236 CGAACGAILGGGSEKEIELLRRYGFYVGM 264
G+I+ +++ + +G +G+
Sbjct: 175 AALQMGSIISETTKENQMNMYNFGLNLGI 203
>gi|386819152|ref|ZP_10106368.1| geranylgeranyl pyrophosphate synthase [Joostella marina DSM 19592]
gi|386424258|gb|EIJ38088.1| geranylgeranyl pyrophosphate synthase [Joostella marina DSM 19592]
Length = 324
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 55 AHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMH 114
+HL + +V KEPV +Y+P+ + + + P L + ++ G ++A+ AA A+ + H
Sbjct: 13 SHLEKEIVTKEPVNLYKPIHYILNLGGKRLRPVLTLMTADIFGTDYKKAMHAAMAVEMFH 72
Query: 115 AASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNS 174
S +H+++ + D + + + K T++ + NT +L DAML + + D
Sbjct: 73 NFSLVHDDI-MDD--APLRRGKETVHEKWDLNTGILSGDAMLIVAYQFFENYDAETFQQL 129
Query: 175 GRIL-RVMVEMTRAMGSQGVVEGQYNELQCSQCDD--DDRKLNGITDVEMTYETYKKKEG 231
++ + +E V EGQ ++ DD D L I TY+T
Sbjct: 130 AKLFSKTAIE---------VCEGQQYDVDFETRDDVTIDEYLKMI-----TYKT-----A 170
Query: 232 RLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
L GAI+ EKE + + +G +G+
Sbjct: 171 VLVGAAMKMGAIISKTDEKEAQAIYDFGLNLGI 203
>gi|302387567|ref|YP_003823389.1| polyprenyl synthetase [Clostridium saccharolyticum WM1]
gi|302198195|gb|ADL05766.1| Polyprenyl synthetase [Clostridium saccharolyticum WM1]
Length = 298
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 102/228 (44%), Gaps = 24/228 (10%)
Query: 66 PVEVYEP-----MRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIH 120
PVE Y+ M + V A + P L L GG+ ++ AA+ ++H +S IH
Sbjct: 27 PVEGYQSTVLAAMDYSVRAGGKRLRPMLMEETYRLFGGNGKEIEPFMAAMEMIHTSSLIH 86
Query: 121 ENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLEL----LASSDNPAGNNSGR 176
++LP D +L + PT + F + +L D +L + +E L+ +D P + R
Sbjct: 87 DDLPCMDNDTL-RRGLPTAWVKFGYDMAVLAGDGLLIYSMETAAKALSMTDRP--DLVAR 143
Query: 177 ILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHAC 236
+ ++ E T G G++ GQ +++ + KL+ I Y+ K G L
Sbjct: 144 CMGILAEKT---GIHGMIGGQTVDVELAGKPIPKEKLHFI---------YRLKTGALLEA 191
Query: 237 GAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
GA+LGG E++++L+ +GM I L T E L K
Sbjct: 192 SMMIGALLGGADERQLKLVENMASCLGMAFQIQDDILDLTSSAEVLGK 239
>gi|302343358|ref|YP_003807887.1| polyprenyl synthetase [Desulfarculus baarsii DSM 2075]
gi|301639971|gb|ADK85293.1| Polyprenyl synthetase [Desulfarculus baarsii DSM 2075]
Length = 297
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 89/216 (41%), Gaps = 10/216 (4%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
+ + MR+ +FA + P LC+A E VGG +A+ A AL ++H S IH++LP
Sbjct: 33 ILKAMRYSLFAGGKRLRPILCLAGAEAVGGDPRRAMFCACALEMIHTYSLIHDDLPAM-D 91
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
+ PT + F +L D +L + LL + + R + + RA
Sbjct: 92 DDDYRRGVPTNHKVFGQGMAVLAGDGLLTQAMVLLTDAAAVGDLPAERARQAANVVMRAA 151
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
G G+V GQ +L + D+ M + +K G L G IL G
Sbjct: 152 GHLGMVGGQAADLLAETME---------PDLAMVDYIHARKTGALICASLEAGGILAGAD 202
Query: 249 EKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
+ L RYG +G+ I L + E L K
Sbjct: 203 RDRLSRLVRYGRRIGLAFQIADDLLDLEGDAETLGK 238
>gi|374985344|ref|YP_004960839.1| polyprenyl diphosphate synthase [Streptomyces bingchenggensis
BCW-1]
gi|297155996|gb|ADI05708.1| polyprenyl diphosphate synthase [Streptomyces bingchenggensis
BCW-1]
Length = 365
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 83/189 (43%), Gaps = 19/189 (10%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
PAL + + E+ G E + A A+ ++H S +H++L D + + T++ P
Sbjct: 78 PALALLSAEVAGQAPEVGVPGAVAVELVHNFSLLHDDLMDGDEQR---RHRDTVWKVHGP 134
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
+LV DA+ E+L +GR R + TR + ++GQ ++
Sbjct: 135 AQAILVGDALFALAGEILLELGTV---EAGRATRRLTSATRKL-----IDGQAQDISYEH 186
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
+ V E K G L AC A+ GA+LGG ++ + L RYG+++G+
Sbjct: 187 RER--------VTVAECLEMEGNKTGALLACAASIGAVLGGADDRTADTLERYGYHLGLA 238
Query: 266 QGIVSRRLG 274
V LG
Sbjct: 239 FQAVDDLLG 247
>gi|300726785|ref|ZP_07060215.1| polyprenyl synthetase [Prevotella bryantii B14]
gi|299775898|gb|EFI72478.1| polyprenyl synthetase [Prevotella bryantii B14]
Length = 324
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 99/217 (45%), Gaps = 21/217 (9%)
Query: 49 VHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAA 108
+ + + +L + ++PV +YEP+R+ + + P L + A L E +++A
Sbjct: 7 ILDKVNDYLNKLPYDRKPVSLYEPIRYVLSIGGKRIRPTLMLLAYNLFKEDPESILMSAC 66
Query: 109 ALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDN 168
AL H + +H++ L D+ L + K T++ + NT +L D+ML + + N
Sbjct: 67 ALETYHNYTLLHDD--LMDQADL-RRGKETVHKKWNANTAILSGDSMLVLAYQRML---N 120
Query: 169 PAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTY-ETYK 227
G++L++ E +G EGQ +++ + VE Y E +
Sbjct: 121 CKPEYQGKVLKLFTETALEIG-----EGQQYDMEFE---------TRMDVVEEEYIEMIR 166
Query: 228 KKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
K L AC GAIL S+++ + L ++G +G+
Sbjct: 167 LKTSVLLACAMKIGAILADASDEDADNLYKFGEQIGL 203
>gi|261417748|ref|YP_003251430.1| polyprenyl synthetase [Geobacillus sp. Y412MC61]
gi|297529440|ref|YP_003670715.1| polyprenyl synthetase [Geobacillus sp. C56-T3]
gi|319767440|ref|YP_004132941.1| polyprenyl synthetase [Geobacillus sp. Y412MC52]
gi|448238671|ref|YP_007402729.1| (2E,6E)-farnesyl diphosphate synthase [Geobacillus sp. GHH01]
gi|261374205|gb|ACX76948.1| Polyprenyl synthetase [Geobacillus sp. Y412MC61]
gi|297252692|gb|ADI26138.1| Polyprenyl synthetase [Geobacillus sp. C56-T3]
gi|317112306|gb|ADU94798.1| Polyprenyl synthetase [Geobacillus sp. Y412MC52]
gi|445207513|gb|AGE22978.1| (2E,6E)-farnesyl diphosphate synthase [Geobacillus sp. GHH01]
Length = 297
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
++ P + + M + + A + P L +A + +G + A A+ ++H S IH++
Sbjct: 28 LRGPETLKKAMAYSLEAGGKRIRPLLLLATIQALGKDPAIGLPVACAIEMIHTYSLIHDD 87
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D L + KPT + F +L DA+L + +L+A D+ R L+++
Sbjct: 88 LPSMDNDDL-RRGKPTNHKVFGEAMAILAGDALLTYAFQLMAEIDDDRVPPPVR-LQLIE 145
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
++ +A G +G+V GQ +++ + E+ Y ++ K G++ GA
Sbjct: 146 QLAKAAGPEGMVAGQAADMEAEG--------KTLALAELEY-IHRHKTGKMLQYSVHAGA 196
Query: 243 ILGGGSEKEIELLRRYGFYVGM 264
+LGG ++ L + ++G+
Sbjct: 197 LLGGADGRQTRELNEFAAHLGL 218
>gi|148560740|ref|YP_001259620.1| geranyltranstransferase [Brucella ovis ATCC 25840]
gi|148371997|gb|ABQ61976.1| geranyltranstransferase [Brucella ovis ATCC 25840]
Length = 304
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 12/202 (5%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + MRH V + P L + + L G + + + AAAL +H S +H++
Sbjct: 36 IARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQYGQAVLRVAAALECIHCYSLVHDD 95
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D L + +PT++ AF +L D++L + +++A SD + + RI +++
Sbjct: 96 LPAMDDDDL-RRGQPTVHKAFDEAAAILAGDSLLTYAFDIIA-SDETELDATTRI-KLVC 152
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+TRA G G+ GQ +L D+ GI +T + K AC A GA
Sbjct: 153 ALTRASGLGGMAGGQALDLMAETRKPDE---AGI----ITLQAMKTGALIRFACEA--GA 203
Query: 243 ILGGGSEKEIELLRRYGFYVGM 264
I+ G S+++ E + +G +G+
Sbjct: 204 IIAGASQEDRERMAEFGSAIGL 225
>gi|153853044|ref|ZP_01994453.1| hypothetical protein DORLON_00438 [Dorea longicatena DSM 13814]
gi|149753830|gb|EDM63761.1| polyprenyl synthetase [Dorea longicatena DSM 13814]
Length = 300
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 84/196 (42%), Gaps = 10/196 (5%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
+ E M + + A + P L L G E AAL ++H S +H++LP D
Sbjct: 36 IMEAMEYSLMAGGKRLRPMLMRETSRLFGDETEALCPFMAALEMIHTYSLVHDDLPAMDN 95
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
+ + T + + + +L DA+L + E + A S +I R + + R
Sbjct: 96 DEY-RRGRKTTHIVYGEDMGILAGDALLNYAFETAFRAFETAPQESLKIGRALSVLGRKA 154
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
G G++ GQ +++ + L+ I Y+ K G L C GAILGG
Sbjct: 155 GVYGMIGGQVIDVKETGHAVPKDVLDTI---------YELKTGALIECAMMIGAILGGAE 205
Query: 249 EKEIELLRRYGFYVGM 264
E+++ + + YVG+
Sbjct: 206 EEDVRKVEKIAHYVGI 221
>gi|29828193|ref|NP_822827.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
gi|29605295|dbj|BAC69362.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
Length = 376
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 19/189 (10%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
PAL V + + G E + A A+ ++H S +H++L D + + T++ P
Sbjct: 91 PALAVLSAQAAGAAPEVGVPGAVAVELVHNFSLLHDDLMDGDEQR---RHRDTVWKVHGP 147
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
+LV DA+ E+L +GR R + +RA+ ++GQ ++
Sbjct: 148 AQAILVGDALFALANEILLELGT---VEAGRATRRLTTASRAL-----IDGQAQDISYEH 199
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
+ VE E K G L AC + GA+LGG ++ + L +YG+++G+
Sbjct: 200 RER--------VTVEECLEMEGNKTGALLACACSIGAVLGGADDRTADTLEKYGYHLGLA 251
Query: 266 QGIVSRRLG 274
V LG
Sbjct: 252 FQAVDDLLG 260
>gi|17986554|ref|NP_539188.1| geranyltranstransferase [Brucella melitensis bv. 1 str. 16M]
gi|62290646|ref|YP_222439.1| IspA, geranyltranstransferase [Brucella abortus bv. 1 str. 9-941]
gi|82700560|ref|YP_415134.1| polyprenyl synthetase [Brucella melitensis biovar Abortus 2308]
gi|225628336|ref|ZP_03786370.1| geranyltranstransferase [Brucella ceti str. Cudo]
gi|225853224|ref|YP_002733457.1| polyprenyl synthetase [Brucella melitensis ATCC 23457]
gi|237816147|ref|ZP_04595142.1| geranyltranstransferase [Brucella abortus str. 2308 A]
gi|256263286|ref|ZP_05465818.1| polyprenyl synthetase [Brucella melitensis bv. 2 str. 63/9]
gi|256370183|ref|YP_003107694.1| geranyltranstransferase [Brucella microti CCM 4915]
gi|260547118|ref|ZP_05822856.1| polyprenyl synthetase [Brucella abortus NCTC 8038]
gi|260565731|ref|ZP_05836214.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. 16M]
gi|260755469|ref|ZP_05867817.1| polyprenyl synthetase [Brucella abortus bv. 6 str. 870]
gi|260758692|ref|ZP_05871040.1| polyprenyl synthetase [Brucella abortus bv. 4 str. 292]
gi|260762526|ref|ZP_05874863.1| polyprenyl synthetase [Brucella abortus bv. 2 str. 86/8/59]
gi|260884489|ref|ZP_05896103.1| polyprenyl synthetase [Brucella abortus bv. 9 str. C68]
gi|261214740|ref|ZP_05929021.1| polyprenyl synthetase [Brucella abortus bv. 3 str. Tulya]
gi|261219357|ref|ZP_05933638.1| polyprenyl synthetase [Brucella ceti M13/05/1]
gi|261222894|ref|ZP_05937175.1| polyprenyl synthetase [Brucella ceti B1/94]
gi|261315865|ref|ZP_05955062.1| polyprenyl synthetase [Brucella pinnipedialis M163/99/10]
gi|261316274|ref|ZP_05955471.1| polyprenyl synthetase [Brucella pinnipedialis B2/94]
gi|261322419|ref|ZP_05961616.1| polyprenyl synthetase [Brucella ceti M644/93/1]
gi|261325809|ref|ZP_05965006.1| polyprenyl synthetase [Brucella neotomae 5K33]
gi|261757424|ref|ZP_06001133.1| polyprenyl synthetase [Brucella sp. F5/99]
gi|265987340|ref|ZP_06099897.1| polyprenyl synthetase [Brucella pinnipedialis M292/94/1]
gi|265991805|ref|ZP_06104362.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. Rev.1]
gi|265998853|ref|ZP_06111410.1| polyprenyl synthetase [Brucella ceti M490/95/1]
gi|294851019|ref|ZP_06791695.1| geranyltranstransferase [Brucella sp. NVSL 07-0026]
gi|297249039|ref|ZP_06932747.1| geranyltranstransferase [Brucella abortus bv. 5 str. B3196]
gi|340791373|ref|YP_004756838.1| IspA, geranyltranstransferase [Brucella pinnipedialis B2/94]
gi|376272501|ref|YP_005151079.1| polyprenyl synthetase [Brucella abortus A13334]
gi|384212135|ref|YP_005601218.1| polyprenyl synthetase [Brucella melitensis M5-90]
gi|384409236|ref|YP_005597857.1| polyprenyl synthetase [Brucella melitensis M28]
gi|384445788|ref|YP_005604507.1| polyprenyl synthetase [Brucella melitensis NI]
gi|423169368|ref|ZP_17156069.1| hypothetical protein M17_03056 [Brucella abortus bv. 1 str. NI435a]
gi|423172482|ref|ZP_17159155.1| hypothetical protein M19_03013 [Brucella abortus bv. 1 str. NI474]
gi|423175618|ref|ZP_17162286.1| hypothetical protein M1A_03013 [Brucella abortus bv. 1 str. NI486]
gi|423178823|ref|ZP_17165466.1| hypothetical protein M1E_03062 [Brucella abortus bv. 1 str. NI488]
gi|423181955|ref|ZP_17168594.1| hypothetical protein M1G_03053 [Brucella abortus bv. 1 str. NI010]
gi|423185043|ref|ZP_17171678.1| hypothetical protein M1I_03010 [Brucella abortus bv. 1 str. NI016]
gi|423188197|ref|ZP_17174809.1| hypothetical protein M1K_03013 [Brucella abortus bv. 1 str. NI021]
gi|423191337|ref|ZP_17177944.1| hypothetical protein M1M_03016 [Brucella abortus bv. 1 str. NI259]
gi|17982161|gb|AAL51452.1| geranyltranstransferase [Brucella melitensis bv. 1 str. 16M]
gi|62196778|gb|AAX75078.1| IspA, geranyltranstransferase [Brucella abortus bv. 1 str. 9-941]
gi|82616661|emb|CAJ11743.1| Polyprenyl synthetase [Brucella melitensis biovar Abortus 2308]
gi|225616182|gb|EEH13230.1| geranyltranstransferase [Brucella ceti str. Cudo]
gi|225641589|gb|ACO01503.1| Polyprenyl synthetase [Brucella melitensis ATCC 23457]
gi|237788609|gb|EEP62822.1| geranyltranstransferase [Brucella abortus str. 2308 A]
gi|256000346|gb|ACU48745.1| geranyltranstransferase [Brucella microti CCM 4915]
gi|260095483|gb|EEW79361.1| polyprenyl synthetase [Brucella abortus NCTC 8038]
gi|260151104|gb|EEW86199.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. 16M]
gi|260669010|gb|EEX55950.1| polyprenyl synthetase [Brucella abortus bv. 4 str. 292]
gi|260672952|gb|EEX59773.1| polyprenyl synthetase [Brucella abortus bv. 2 str. 86/8/59]
gi|260675577|gb|EEX62398.1| polyprenyl synthetase [Brucella abortus bv. 6 str. 870]
gi|260874017|gb|EEX81086.1| polyprenyl synthetase [Brucella abortus bv. 9 str. C68]
gi|260916347|gb|EEX83208.1| polyprenyl synthetase [Brucella abortus bv. 3 str. Tulya]
gi|260921478|gb|EEX88131.1| polyprenyl synthetase [Brucella ceti B1/94]
gi|260924446|gb|EEX91014.1| polyprenyl synthetase [Brucella ceti M13/05/1]
gi|261295109|gb|EEX98605.1| polyprenyl synthetase [Brucella ceti M644/93/1]
gi|261295497|gb|EEX98993.1| polyprenyl synthetase [Brucella pinnipedialis B2/94]
gi|261301789|gb|EEY05286.1| polyprenyl synthetase [Brucella neotomae 5K33]
gi|261304891|gb|EEY08388.1| polyprenyl synthetase [Brucella pinnipedialis M163/99/10]
gi|261737408|gb|EEY25404.1| polyprenyl synthetase [Brucella sp. F5/99]
gi|262553542|gb|EEZ09311.1| polyprenyl synthetase [Brucella ceti M490/95/1]
gi|263002761|gb|EEZ15164.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. Rev.1]
gi|263093252|gb|EEZ17349.1| polyprenyl synthetase [Brucella melitensis bv. 2 str. 63/9]
gi|264659537|gb|EEZ29798.1| polyprenyl synthetase [Brucella pinnipedialis M292/94/1]
gi|294821662|gb|EFG38658.1| geranyltranstransferase [Brucella sp. NVSL 07-0026]
gi|297174172|gb|EFH33529.1| geranyltranstransferase [Brucella abortus bv. 5 str. B3196]
gi|326409783|gb|ADZ66848.1| polyprenyl synthetase [Brucella melitensis M28]
gi|326539499|gb|ADZ87714.1| polyprenyl synthetase [Brucella melitensis M5-90]
gi|340559832|gb|AEK55070.1| IspA, geranyltranstransferase [Brucella pinnipedialis B2/94]
gi|349743777|gb|AEQ09320.1| Polyprenyl synthetase [Brucella melitensis NI]
gi|363400107|gb|AEW17077.1| polyprenyl synthetase [Brucella abortus A13334]
gi|374535052|gb|EHR06579.1| hypothetical protein M1A_03013 [Brucella abortus bv. 1 str. NI486]
gi|374535245|gb|EHR06771.1| hypothetical protein M19_03013 [Brucella abortus bv. 1 str. NI474]
gi|374535554|gb|EHR07076.1| hypothetical protein M17_03056 [Brucella abortus bv. 1 str. NI435a]
gi|374544586|gb|EHR16056.1| hypothetical protein M1E_03062 [Brucella abortus bv. 1 str. NI488]
gi|374544877|gb|EHR16342.1| hypothetical protein M1G_03053 [Brucella abortus bv. 1 str. NI010]
gi|374545020|gb|EHR16484.1| hypothetical protein M1I_03010 [Brucella abortus bv. 1 str. NI016]
gi|374552848|gb|EHR24270.1| hypothetical protein M1K_03013 [Brucella abortus bv. 1 str. NI021]
gi|374553042|gb|EHR24463.1| hypothetical protein M1M_03016 [Brucella abortus bv. 1 str. NI259]
Length = 304
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 12/202 (5%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + MRH V + P L + + L G + + + AAAL +H S +H++
Sbjct: 36 IARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQYGQAVLRVAAALECIHCYSLVHDD 95
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D L + +PT++ AF +L D++L + +++A SD + + RI +++
Sbjct: 96 LPAMDDDDL-RRGQPTVHKAFDEAAAILAGDSLLTYAFDIIA-SDETELDATTRI-KLVC 152
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+TRA G G+ GQ +L D+ GI +T + K AC A GA
Sbjct: 153 ALTRASGLGGMAGGQALDLMAETRKPDE---AGI----ITLQAMKTGALIRFACEA--GA 203
Query: 243 ILGGGSEKEIELLRRYGFYVGM 264
I+ G S+++ E + +G +G+
Sbjct: 204 IIAGASQEDRERMAEFGSAIGL 225
>gi|110597592|ref|ZP_01385877.1| Geranyltranstransferase [Chlorobium ferrooxidans DSM 13031]
gi|110340712|gb|EAT59189.1| Geranyltranstransferase [Chlorobium ferrooxidans DSM 13031]
Length = 366
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 117/261 (44%), Gaps = 33/261 (12%)
Query: 13 HVAPRRNHSRPSLS---YRPMMVTMAMSTP-------NKNKSYWTSVHEDIGAHLRQAVV 62
HV+ R ++ R + YR M M+ P K + Y T +++ +G +
Sbjct: 9 HVSHRSSYYRGAPEQKPYRKTMTDFTMNIPVTQELVEKKYRLYHTKINDALGTCFEK--- 65
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ PV +YEP R+ + + P L + A E V G E A+ A A+ V+H + +H++
Sbjct: 66 -QSPVTLYEPARYILEGKGKRIRPFLTLLASEAVSGSSENALNVALAVEVLHNFTLMHDD 124
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
+ D+ L +PT++ + N +L D M+ + EL + + + ++ ++
Sbjct: 125 --IMDQADL-RHGRPTVHLEWNVNAAILSGDMMIAYAYELALQAKS---SRHAELVHILN 178
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+ + + EGQ +++ +++K I D + KK GRL + G
Sbjct: 179 D-----ANITICEGQALDMEL-----EEKKDATIADY---LDMIAKKTGRLISAALEAGG 225
Query: 243 ILGGGSEKEIELLRRYGFYVG 263
+ G +++++ L +G +G
Sbjct: 226 VAGNATDEQLRSLVLFGEKIG 246
>gi|265995644|ref|ZP_06108201.1| polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether]
gi|262766928|gb|EEZ12546.1| polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether]
Length = 304
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 12/202 (5%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + MRH V + P L + + L G + + + AAAL +H S +H++
Sbjct: 36 IARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQYGQAVLRVAAALECIHCYSLVHDD 95
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D L + +PT++ AF +L D++L + +++A SD + + RI +++
Sbjct: 96 LPAMDDDDL-RRGQPTVHKAFDEAAAILAGDSLLTYAFDIIA-SDETELDATTRI-KLVC 152
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+TRA G G+ GQ +L D+ GI +T + K AC A GA
Sbjct: 153 ALTRASGLGGMAGGQALDLMAETRKPDE---AGI----ITLQAMKTGALIRFACEA--GA 203
Query: 243 ILGGGSEKEIELLRRYGFYVGM 264
I+ G S+++ E + +G +G+
Sbjct: 204 IIAGASQEDRERMAEFGSAIGL 225
>gi|335357254|ref|ZP_08549124.1| geranyltranstransferase [Lactobacillus animalis KCTC 3501]
Length = 292
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 17/218 (7%)
Query: 73 MRHFVFAAPVNMAPALCVAACELVGGHREQAIVA-AAALHVMHAASFIHENLPLSDRTSL 131
M++ + A + P L + C+ +G + +++ A +L +H S IH++LP D L
Sbjct: 35 MQYSLEAGGKRIRPLLIMLICQSLGKKIDPDVLSVAGSLEFLHTYSLIHDDLPEMDNDDL 94
Query: 132 IPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSD-NPAGNNSGRILRVMVEMTRAMGS 190
+ KPT + F + +L DA+L +A + +P + + ++ E+ +A G+
Sbjct: 95 -RRGKPTNHKVFGQDIAVLAGDALLTEAFGWIAKTKLSPK-----KRVTLVAELAKAAGA 148
Query: 191 QGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEK 250
G+V GQ +++ + +T E+ + +K K G+L GAILGG + K
Sbjct: 149 NGMVAGQTSDILGEKTT--------LTLAEL-MQVHKNKTGQLLEYACFAGAILGGATPK 199
Query: 251 EIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
+ + L +G G+ I L T EL K A K
Sbjct: 200 QEQALVTFGQKFGLAFQIYDDILDVTATTAELGKTANK 237
>gi|168214394|ref|ZP_02640019.1| geranyltranstransferase [Clostridium perfringens CPE str. F4969]
gi|168215448|ref|ZP_02641073.1| geranyltranstransferase [Clostridium perfringens NCTC 8239]
gi|170714145|gb|EDT26327.1| geranyltranstransferase [Clostridium perfringens CPE str. F4969]
gi|182382163|gb|EDT79642.1| geranyltranstransferase [Clostridium perfringens NCTC 8239]
Length = 290
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 105/228 (46%), Gaps = 12/228 (5%)
Query: 69 VYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDR 128
+Y+ M + + + P L + + + ++ + A A+ ++H S IH++LP D
Sbjct: 28 LYDSMAYSINVGGKRIRPILMLLSYYIYKSDYKKILTPAMAIEMIHTYSLIHDDLPCMDN 87
Query: 129 TSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAM 188
L + KPT + F +L DA+L +++L G ++ + +++ + A
Sbjct: 88 DDL-RRGKPTNHKVFGEAIAVLAGDALLNEAMKILVDYSLEEGKSALKATKIIAD---AA 143
Query: 189 GSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGS 248
GS G++ GQ ++ ++D + I+ E+ Y + KK G L GA+L S
Sbjct: 144 GSDGMIGGQIVDI----INEDKEE---ISLKELDY-MHLKKTGELIKASIMSGAVLAEAS 195
Query: 249 EKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVNSFN 296
E +I+ L +G+ +G+ I L ++L K K +E N N
Sbjct: 196 EGDIKKLEDFGYKLGLAFQIKDDILDVVGNAKDLGKNVHKDQESNKNN 243
>gi|115358000|ref|YP_775138.1| polyprenyl synthetase [Burkholderia ambifaria AMMD]
gi|115283288|gb|ABI88804.1| farnesyl-diphosphate synthase [Burkholderia ambifaria AMMD]
Length = 294
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 116/268 (43%), Gaps = 28/268 (10%)
Query: 36 MSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACEL 95
M+ +S V + +G +L VV P +++E MR+ V + P LC AA EL
Sbjct: 1 MTFEQWMRSVLDRVEDALGHYLPAENVV--PTQLHEAMRYAVLGGGKRVRPLLCHAAGEL 58
Query: 96 VGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAM 155
G AAAAL ++H S +H+++P D +L + KPT++ + T LLV DA+
Sbjct: 59 TGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDAL-RRGKPTVHVQYDEPTALLVGDAL 117
Query: 156 LPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNG 215
L +D + ++R E+ A GS G+ GQ +L
Sbjct: 118 QSQAFVALTDADALSPVQQAALVR---ELALASGSIGMAGGQAIDLAS------------ 162
Query: 216 ITDVEMTYETYKK----KEGRLHACGAACGAILGGG-SEKEIELLRRYGFYVGMIQGIVS 270
+++T E +K K G L GA+ G S + + L Y VG+ +V
Sbjct: 163 -VGLKLTREQLEKMHRMKTGALLRAAVRMGALAGETPSAETLAALDVYAAAVGLAFQVVD 221
Query: 271 RRLGPTEEIEELKKLAFKLREVNSFNDE 298
L T + L K A K ++ ND+
Sbjct: 222 DILDVTTDSATLGKTAGK----DAANDK 245
>gi|54295170|ref|YP_127585.1| hypothetical protein lpl2250 [Legionella pneumophila str. Lens]
gi|53755002|emb|CAH16490.1| hypothetical protein lpl2250 [Legionella pneumophila str. Lens]
Length = 298
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 101/221 (45%), Gaps = 12/221 (5%)
Query: 46 WTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIV 105
+T HE L +V+ P ++ + + +F+ + P L A +L+ +E +
Sbjct: 9 YTQRHELYLEQLLNEIVIPAP-QIRSALHYALFSGGKRIRPILVYLAGDLIDVDQEVLDI 67
Query: 106 AAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLAS 165
AAAL + H S IH++LP D L + KP+ + AF T +LV D M +E++
Sbjct: 68 IAAALELTHCYSLIHDDLPAMDNDDL-RRGKPSCHKAFDEATAILVGDGMQALAIEVVLM 126
Query: 166 SDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYET 225
+P + +++ + + A G G+V GQ D + + +T+ E E
Sbjct: 127 RLSPL-LPAAQVVAITQVLVNASGISGMVSGQ-------SLDLSELAKSSVTE-EQLREI 177
Query: 226 YKKKEGRL-HACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
+ K G+L AC A SE+ LR YG ++G++
Sbjct: 178 HLLKTGKLILACFEMVLAAQHEVSEQIKSALRTYGKHIGLV 218
>gi|374603540|ref|ZP_09676518.1| polyprenyl synthetase [Paenibacillus dendritiformis C454]
gi|374390842|gb|EHQ62186.1| polyprenyl synthetase [Paenibacillus dendritiformis C454]
Length = 304
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 10/199 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P E+ E M + + A + P V ACE + G E A A A+ ++H S +H++LP
Sbjct: 36 PAELKESMLYSLMAGGKRLRPLCVVIACESLNGPLEAADPVACAIEMIHTYSLVHDDLPA 95
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D + KPT + F +L DA+L +A G ++ L + E++
Sbjct: 96 MDNDD-YRRGKPTNHKVFGEALAILAGDALLTHAFYTVAQCARRHGISAEIALTITEELS 154
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
G +G+V GQ ++ Q G+T ++ + K L GA L
Sbjct: 155 VYAGMRGMVGGQTADMLGEQ---------GLTTLDQLEYIHLHKTSDLIVFALRAGAHLA 205
Query: 246 GGSEKEIELLRRYGFYVGM 264
G +E ++ L +G +G+
Sbjct: 206 GANEAQLNALTEFGTKLGL 224
>gi|134101439|ref|YP_001107100.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase
[Saccharopolyspora erythraea NRRL 2338]
gi|291008114|ref|ZP_06566087.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase
[Saccharopolyspora erythraea NRRL 2338]
gi|133914062|emb|CAM04175.1| dimethylallyltranstransferase / geranyltranstransferase /
geranylgeranyl pyrophosphate synthetase
[Saccharopolyspora erythraea NRRL 2338]
Length = 345
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 19/202 (9%)
Query: 86 PALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKP 145
PAL + A E VGG A+ AA A+ ++H S +H+++ DRT + +PT + F
Sbjct: 67 PALALLASEAVGGSATAAVPAAVAVELVHNFSLLHDDVMDGDRTR---RHRPTAWTVFGI 123
Query: 146 NTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQ 205
+LV D +L ++LA+S++P+ + R+L V Q +V GQ+ ++
Sbjct: 124 GNAVLVGDVLLSLACDVLAASEHPSATKAIRLLTDAV--------QRLVAGQFVDIAFQ- 174
Query: 206 CDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
DR+ ++ + K G L A G I G G+ ++++ R +G VG+
Sbjct: 175 ----DRR---AVQLDECVSMAENKTGALLGAACALGTIFGDGTAQQVDHQRAFGEGVGLA 227
Query: 266 QGIVSRRLGPTEEIEELKKLAF 287
V LG + K AF
Sbjct: 228 FQHVDDLLGIWGDPARTGKSAF 249
>gi|228960446|ref|ZP_04122097.1| Geranyltranstransferase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|423630903|ref|ZP_17606650.1| hypothetical protein IK5_03753 [Bacillus cereus VD154]
gi|228799210|gb|EEM46176.1| Geranyltranstransferase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|401264270|gb|EJR70382.1| hypothetical protein IK5_03753 [Bacillus cereus VD154]
Length = 296
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 98/199 (49%), Gaps = 11/199 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P + E M + + A + P L A + G R + AA AL ++H S +H++LP
Sbjct: 30 PNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPC 89
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D L + KPT + F +L D +L + +++ + + + ++ R+++E+
Sbjct: 90 MDDDDL-RRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKV-RLVLELA 147
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
+A G +G+V GQ ++ D + ++L T E+ Y +K K G+L GAIL
Sbjct: 148 KAAGPEGMVGGQVADM-----DAEGKRL---TIDELEY-IHKHKTGKLLEFAVLAGAILS 198
Query: 246 GGSEKEIELLRRYGFYVGM 264
+E++ E L + Y+G+
Sbjct: 199 DATEEQEEKLLTFAKYIGL 217
>gi|397691570|ref|YP_006528824.1| Geranylgeranyl pyrophosphate synthase [Melioribacter roseus P3M]
gi|395813062|gb|AFN75811.1| Geranylgeranyl pyrophosphate synthase [Melioribacter roseus P3M]
Length = 328
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 19/214 (8%)
Query: 51 EDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAAL 110
E I + + K+P +YEP ++ + + + P L + + + GG A AA A+
Sbjct: 15 EKIEKRIEKLFNNKKPASLYEPCKYALESGGKRLRPVLLLLSTKAAGGKFNDAYNAALAV 74
Query: 111 HVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPA 170
+ H + +H+++ S I + +P++Y F NT +L D ++ F +LL
Sbjct: 75 EIFHNFTLVHDDIM---DNSPIRRGRPSLYKKFDTNTAILAGDNLIAFAYKLLLKD---C 128
Query: 171 GNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKE 230
N+ +I+ + + G V EGQ D + ++ E KK
Sbjct: 129 QKNTNQIIEIFTQ-----GIIDVCEGQ-------SLDKEFETRRNVSLREYRNMISKKTA 176
Query: 231 GRLHACGAACGAILGGGSEKEIELLRRYGFYVGM 264
L C G ++ G + + + +L YG +GM
Sbjct: 177 ALLTVC-TGIGGLIAGANYEVVRILMNYGKNLGM 209
>gi|70605942|ref|YP_254812.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus acidocaldarius
DSM 639]
gi|449066135|ref|YP_007433217.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus acidocaldarius
N8]
gi|449068411|ref|YP_007435492.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus acidocaldarius
Ron12/I]
gi|729570|sp|P39464.1|GGPS_SULAC RecName: Full=Geranylgeranyl diphosphate synthase; Short=GGPP
synthase; Short=GGPS
gi|506371|dbj|BAA43200.1| geranylgeranyl diphosphate synthase [Sulfolobus acidocaldarius]
gi|68566590|gb|AAY79519.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus acidocaldarius
DSM 639]
gi|449034643|gb|AGE70069.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus acidocaldarius
N8]
gi|449036919|gb|AGE72344.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus acidocaldarius
Ron12/I]
Length = 330
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 106/226 (46%), Gaps = 18/226 (7%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
++YE H + + P + + +L GG RE+A A AA+ V+H + +H+++ D
Sbjct: 29 KLYEASYHLFTSGGKRLRPLILTISSDLFGGQRERAYYAGAAIEVLHTFTLVHDDIMDQD 88
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
I + PT++ + +L D + +LL + G S I++ TR+
Sbjct: 89 N---IRRGLPTVHVKYGLPLAILAGDLLHAKAFQLLTQA--LRGLPSETIIKAFDIFTRS 143
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTY-ETYKKKEGRLHACGAACGAILGG 246
+ + EGQ +++ +DR I E Y + +K L + ++ GA++ G
Sbjct: 144 III--ISEGQAVDMEF-----EDR----IDIKEQEYLDMISRKTAALFSASSSIGALIAG 192
Query: 247 GSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK-LRE 291
++ ++ L+ +G +G+ IV LG T + +EL K F +RE
Sbjct: 193 ANDNDVRLMSDFGTNLGIAFQIVDDILGLTADEKELGKPVFSDIRE 238
>gi|288965921|pdb|3LOM|A Chain A, Crystal Structure Of Geranyltransferase From Legionella
Pneumophila
gi|288965922|pdb|3LOM|B Chain B, Crystal Structure Of Geranyltransferase From Legionella
Pneumophila
Length = 313
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 107/236 (45%), Gaps = 15/236 (6%)
Query: 34 MAMSTPNKNKSY---WTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCV 90
M++++ NK +T HE L +++ P ++ + + +F+ + P L
Sbjct: 1 MSLNSTQMNKQVIDKYTQRHELYLEQLLNEIIIPAP-QIRSALHYALFSGGKRIRPILVY 59
Query: 91 AACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELL 150
A +L+ + + AAAL + H S IH++LP D L + KP+ + AF T +L
Sbjct: 60 LAGDLIDVDQGVLDIIAAALELTHCYSLIHDDLPAMDNDDL-RRGKPSCHKAFDEATAIL 118
Query: 151 VADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDD 210
V D M +E+L +P + +++ + + A G G+V GQ D +
Sbjct: 119 VGDGMQALAIEVLLMRLSPL-LPAAQVVAITQVLVNASGISGMVSGQ-------SLDLSE 170
Query: 211 RKLNGITDVEMTYETYKKKEGRL-HACGAACGAILGGGSEKEIELLRRYGFYVGMI 265
+ +T+ E E + K G+L AC A SE+ LR YG ++G++
Sbjct: 171 LAKSSVTE-EQLREIHLLKTGKLILACFEMVLAAQHEVSEQIKSALRTYGKHIGLV 225
>gi|163845354|ref|YP_001623009.1| hypothetical protein BSUIS_B1253 [Brucella suis ATCC 23445]
gi|163676077|gb|ABY40187.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
Length = 304
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 12/202 (5%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + MRH V + P L + + L G + + + AAAL +H S +H++
Sbjct: 36 IARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQYGQAVLRVAAALECIHCYSLVHDD 95
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D L + +PT++ AF +L D++L + +++A SD + + RI +++
Sbjct: 96 LPAMDDDDL-RRGQPTVHKAFDEAAAILAGDSLLTYAFDIIA-SDETELDATTRI-KLVC 152
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+TRA G G+ GQ +L D+ GI +T + K AC A GA
Sbjct: 153 ALTRASGLGGMAGGQALDLMAETRKPDE---AGI----ITLQAMKTGALIRFACEA--GA 203
Query: 243 ILGGGSEKEIELLRRYGFYVGM 264
I+ G S+++ E + +G +G+
Sbjct: 204 IIAGASQEDRERMAEFGSAIGL 225
>gi|62959213|gb|AAY23714.1| farnesyl diphosphate synthase [Synechococcus sp. WH 5701]
Length = 145
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 75/148 (50%), Gaps = 18/148 (12%)
Query: 120 HENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASS-DNPAGNNSGRIL 178
H++LP D L + KPT + + + +L DA+L + E +A + D PA R+L
Sbjct: 1 HDDLPGMDNDDL-RQGKPTNHKVYGEDIAILAGDALLSYAFEYVARTPDIPAE----RLL 55
Query: 179 RVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDV--EMTYETYKKKEGRLHAC 236
+V+V + +A+G++G+V GQ +L+ G TDV E + K G L
Sbjct: 56 QVIVRLGQAVGAEGLVGGQVVDLESE----------GKTDVSVETLNFIHTHKTGALLEV 105
Query: 237 GAACGAILGGGSEKEIELLRRYGFYVGM 264
GA+L G +E++LL RY +G+
Sbjct: 106 CVTAGAVLAGAKPEEVQLLSRYAQNIGL 133
>gi|261750926|ref|ZP_05994635.1| polyprenyl synthetase [Brucella suis bv. 5 str. 513]
gi|261740679|gb|EEY28605.1| polyprenyl synthetase [Brucella suis bv. 5 str. 513]
Length = 304
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 12/202 (5%)
Query: 63 VKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHEN 122
+ P + MRH V + P L + + L G + + + AAAL +H S +H++
Sbjct: 36 IARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQYGQAVLRVAAALECIHCYSLVHDD 95
Query: 123 LPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMV 182
LP D L + +PT++ AF +L D++L + +++A SD + + RI +++
Sbjct: 96 LPAMDDDDL-RRGQPTVHKAFDEAAAILAGDSLLTYAFDIIA-SDETELDATTRI-KLVC 152
Query: 183 EMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGA 242
+TRA G G+ GQ +L D+ GI +T + K AC A GA
Sbjct: 153 ALTRASGLGGMAGGQALDLMAETRKPDE---AGI----ITLQAMKTGALIRFACEA--GA 203
Query: 243 ILGGGSEKEIELLRRYGFYVGM 264
I+ G S+++ E + +G +G+
Sbjct: 204 IIAGASQEDRERMAEFGSAIGL 225
>gi|456064025|ref|YP_007502995.1| Polyprenyl synthetase [beta proteobacterium CB]
gi|455441322|gb|AGG34260.1| Polyprenyl synthetase [beta proteobacterium CB]
Length = 297
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 106/228 (46%), Gaps = 15/228 (6%)
Query: 62 VVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAA-ALHVMHAASFIH 120
V P ++E MR+ + P L AA L + A+ AAA A+ +HA S +H
Sbjct: 29 VNTNPARLHEAMRYAAQGGGKRIRPLLVYAAGALSDDANQNALDAAAVAIECIHAYSLVH 88
Query: 121 ENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRV 180
++LP D L + +PT++ A+ T LLV DA+ E+LA++ A L +
Sbjct: 89 DDLPCMDDDDL-RRGRPTVHKAYDEATALLVGDALQTRAFEILANAQCDADTR----LAM 143
Query: 181 MVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAAC 240
+ + A GS+G+ GQ +L+ +KL D+ + + K G L +C
Sbjct: 144 ISTLAGASGSRGMAGGQAIDLESV-----GKKL----DLAGLKQMHAMKTGALLSCSVEM 194
Query: 241 GAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFK 288
G I+ + +++ L+ Y +G+ IV L T + + L K A K
Sbjct: 195 GGIVAKLNSTQMQHLQNYAQALGLAFQIVDDVLDATADSQTLGKTAGK 242
>gi|238926867|ref|ZP_04658627.1| Farnesyltranstransferase [Selenomonas flueggei ATCC 43531]
gi|238885399|gb|EEQ49037.1| Farnesyltranstransferase [Selenomonas flueggei ATCC 43531]
Length = 291
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 13/194 (6%)
Query: 71 EPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTS 130
+ M + + A + P L +AA + VG + + A AL ++H S IH++LP D
Sbjct: 32 QAMAYSLMAGGKRLRPVLLMAAADAVGADGAKFLSVACALEMIHTYSLIHDDLPAMDNDD 91
Query: 131 LIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGS 190
+ K T + F +L D +L ++ N + + +LRV+ E++RA G+
Sbjct: 92 -YRRGKLTNHKVFGDGIAILAGDGLLTLAFTVILRQQNVSADT---LLRVVDEISRAAGA 147
Query: 191 QGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEK 250
+G+V GQ +L+ + + I+ EM + K G L GAILGG SE
Sbjct: 148 EGMVGGQVLDLRAEE--------HRISMEEMR-RVHMGKTGALFRAALRSGAILGGASEA 198
Query: 251 EIELLRRYGFYVGM 264
++ L Y G+
Sbjct: 199 QLAALTTYAEQFGL 212
>gi|299533199|ref|ZP_07046583.1| Polyprenyl synthetase [Comamonas testosteroni S44]
gi|298718729|gb|EFI59702.1| Polyprenyl synthetase [Comamonas testosteroni S44]
Length = 313
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 7/147 (4%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L + V + P + E MR+ V + P L AA E VGG + A A+ ++HA
Sbjct: 37 LSRWVGINAPAGLGEAMRYAVLDGGKRLRPLLVWAAAEAVGGLAAATLRAGCAVELIHAY 96
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDN--PAGNNS 174
S +H+++P D ++ + KPT++ F + LL DA+ ELL D+ P +
Sbjct: 97 SLVHDDMPCMDNDTM-RRGKPTVHVQFGEASALLAGDALQALAFELLLPEDDGIPCSMQA 155
Query: 175 GRILRVMVEMTRAMGSQGVVEGQYNEL 201
++ R+ + A GSQG+ GQ +L
Sbjct: 156 -KLCRL---LGAAAGSQGMAGGQAIDL 178
>gi|62959177|gb|AAY23696.1| farnesyl diphosphate synthase [Bacillus sp. JL-34]
gi|62959197|gb|AAY23706.1| farnesyl diphosphate synthase [Bacillus sp. JL-29]
gi|73811209|gb|AAY23723.1| farnesyl diphosphate synthase [Citromicrobium bathyomarinum JL354]
Length = 145
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 120 HENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASS-DNPAGNNSGRIL 178
H+++P D L + KPT + + + +L DA+L + E +A + D PA R+L
Sbjct: 1 HDDMPGMDNDDL-RRGKPTNHKVYGEDIAILAGDALLSYAFEYVARTPDIPAE----RLL 55
Query: 179 RVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGA 238
+V+V + +A+G++G+V GQ +L+ D VE + K G L
Sbjct: 56 QVIVRLGQAVGAEGLVGGQVVDLESEGKTD--------VSVETLNFIHTHKTGALLEVCV 107
Query: 239 ACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRL 273
GA+L G +E++LL RY +G+ IV L
Sbjct: 108 TAGAVLAGAKPEEVQLLSRYAQNIGLAFQIVDDIL 142
>gi|62959173|gb|AAY23694.1| farnesyl diphosphate synthase [Roseobacter denitrificans OCh 114]
Length = 145
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 77/157 (49%), Gaps = 18/157 (11%)
Query: 120 HENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASS-DNPAGNNSGRIL 178
H++LP D L + KP + + + +L DA+L + E +A + D PA R+L
Sbjct: 1 HDDLPAMDNDDL-RRGKPANHKVYGEDIAILAGDALLSYAFEYVARTPDIPAE----RLL 55
Query: 179 RVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDV--EMTYETYKKKEGRLHAC 236
+V+V + +A+G++G+V GQ +L+ G TDV E + K G L
Sbjct: 56 QVIVRLGQAVGAEGLVGGQVVDLESE----------GKTDVSVETLNFIHTHKTGALLEV 105
Query: 237 GAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRL 273
GA+L G +E++LL RY +G+ IV L
Sbjct: 106 CVTAGAVLAGAKPEEVQLLSRYAQNIGLAFQIVDDIL 142
>gi|418531677|ref|ZP_13097588.1| polyprenyl synthetase [Comamonas testosteroni ATCC 11996]
gi|371451179|gb|EHN64220.1| polyprenyl synthetase [Comamonas testosteroni ATCC 11996]
Length = 309
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 7/147 (4%)
Query: 57 LRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAA 116
L + V + P + E MR+ V + P L AA E VGG + A A+ ++HA
Sbjct: 33 LSRWVGINAPAGLGEAMRYAVLDGGKRLRPLLVWAAAEAVGGLAAATLRAGCAVELIHAY 92
Query: 117 SFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDN--PAGNNS 174
S +H+++P D ++ + KPT++ F + LL DA+ ELL D+ P +
Sbjct: 93 SLVHDDMPCMDNDTM-RRGKPTVHVQFGEASALLAGDALQALAFELLLPEDDGIPCSMQA 151
Query: 175 GRILRVMVEMTRAMGSQGVVEGQYNEL 201
++ R+ + A GSQG+ GQ +L
Sbjct: 152 -KLCRL---LGAAAGSQGMAGGQAIDL 174
>gi|374307438|ref|YP_005053869.1| geranyltranstransferase [Filifactor alocis ATCC 35896]
gi|291166548|gb|EFE28594.1| geranyltranstransferase [Filifactor alocis ATCC 35896]
Length = 296
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 12/214 (5%)
Query: 71 EPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTS 130
E M + + A + P LC+ + +L E + A+AL ++H S IH++LP D
Sbjct: 38 ESMNYSLLAGGKRIRPILCLQSADLYHISNEAILPYASALEMIHTYSLIHDDLPAMDDDD 97
Query: 131 LIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGS 190
L + KPT + + +L D +L E++ +D G G+ L+ + + +A G
Sbjct: 98 L-RRGKPTNHKVYGEAIAILAGDGLLNLAYEIML-NDLLHGYTDGK-LKAVHYIAKAAGI 154
Query: 191 QGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEK 250
G+V GQ +LQ N D ++ + ++ K G L GA++GG SE+
Sbjct: 155 HGMVAGQVLDLQME---------NQRCDADLLKKIHRNKTGELLKASILAGALVGGASEE 205
Query: 251 EIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
+ +Y ++G++ I L +E + K
Sbjct: 206 DCYYWEQYADHLGLVFQITDDMLDVIGNVELMGK 239
>gi|423348541|ref|ZP_17326224.1| hypothetical protein HMPREF1060_03896 [Parabacteroides merdae
CL03T12C32]
gi|409214019|gb|EKN07031.1| hypothetical protein HMPREF1060_03896 [Parabacteroides merdae
CL03T12C32]
Length = 324
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 23/201 (11%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P +Y+P+ + + + PAL + AC L + + A+ A L V H + +H++L +
Sbjct: 24 PKSLYDPIEYILSLGGKRIRPALVLMACNLYKENVDTAVKPALGLEVFHNFTLLHDDL-M 82
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
D ++KPT++ + NT +L DAML +L+ G L+ ++++
Sbjct: 83 DDADK--RRNKPTVHKVWNANTAILSGDAMLIAAYQLI-------GETKSESLKEILDLF 133
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDV--EMTYETYKKKEGRLHACGAACGAI 243
+ QY D + TDV E E + K L AC GAI
Sbjct: 134 TRTALEICGGQQY-----------DMEFESRTDVTEEEYIEMIRLKTAVLLACALKMGAI 182
Query: 244 LGGGSEKEIELLRRYGFYVGM 264
+G + + E L ++G +G+
Sbjct: 183 MGNAPKADTETLYQFGINIGL 203
>gi|67008257|emb|CAJ00342.1| putative geranylgerannylpyrophosphate synthase [Andrographis
paniculata]
Length = 141
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 79/153 (51%), Gaps = 14/153 (9%)
Query: 132 IPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQ 191
+ + KPT + + + +L DA+L F E LA++ N ++ + E++R +G++
Sbjct: 1 LRRGKPTNHKVYGEDVAVLAGDALLAFAFEHLATATEDVPTN--MVVSAIGELSRCIGAE 58
Query: 192 GVVEGQYNELQCSQCDDDDRKLNGITDV--EMTYETYKKKEGRLHACGAACGAILGGGSE 249
G+V GQ ++ CS+ GI++V E+ + K L GAILGG +E
Sbjct: 59 GLVAGQVVDI-CSE---------GISEVGLELLEFIHLHKTAALLEGSVVLGAILGGATE 108
Query: 250 KEIELLRRYGFYVGMIQGIVSRRLGPTEEIEEL 282
E+E LR++ +G++ +V L T+ EEL
Sbjct: 109 SEVERLRKFARCIGLLFQVVDDILDVTKCSEEL 141
>gi|291298290|ref|YP_003509568.1| polyprenyl synthetase [Stackebrandtia nassauensis DSM 44728]
gi|290567510|gb|ADD40475.1| Polyprenyl synthetase [Stackebrandtia nassauensis DSM 44728]
Length = 346
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 22/197 (11%)
Query: 68 EVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSD 127
E EP H A + PAL + VG +A+ AA A+ ++H S +H+++ D
Sbjct: 52 ENAEPAEHKAGKA---IRPALVLLCARAVGSSDIEALPAAVAVELVHNFSLVHDDVIDRD 108
Query: 128 RTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRA 187
T + +PT + F +L DAM +LA S +PA + ++ + RA
Sbjct: 109 VTR---RHRPTAWSVFGDGAAILAGDAMSTLACAVLADSGHPAAMDGIKL------VNRA 159
Query: 188 MGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGG 247
+ Q +++GQ+ ++ + D + K G L C A GA GGG
Sbjct: 160 I--QELIDGQHADVSFETREQ--------IDPQECRAMAAAKTGALLGCACAIGARFGGG 209
Query: 248 SEKEIELLRRYGFYVGM 264
S ++E LR +G +G+
Sbjct: 210 SPHQVERLRAFGTDLGL 226
>gi|170699439|ref|ZP_02890483.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10]
gi|170135639|gb|EDT03923.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10]
Length = 294
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 114/265 (43%), Gaps = 22/265 (8%)
Query: 36 MSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACEL 95
M+ +S V + +G +L VV P +++E MR+ V + P LC AA EL
Sbjct: 1 MTFEQWMRSVLDRVEDALGHYLPAENVV--PTQLHEAMRYAVLGGGKRVRPLLCHAAGEL 58
Query: 96 VGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAM 155
G AAAAL ++H S +H+++P D +L + KPT++ + T LLV DA+
Sbjct: 59 TGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDAL-RRGKPTVHVQYDEPTALLVGDAL 117
Query: 156 LPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNG 215
L D + ++R E+ A GS G+ GQ +L G
Sbjct: 118 QSQAFVALTDVDALSPVQQAALVR---ELALASGSIGMAGGQAIDLASV----------G 164
Query: 216 ITDVEMTYET-YKKKEGRLHACGAACGAILGGG-SEKEIELLRRYGFYVGMIQGIVSRRL 273
+ ET ++ K G L GA+ G S + + L Y VG+ +V L
Sbjct: 165 LKLTREQLETMHRMKTGALLRAAVRMGALAGDTPSAETLAALDVYAAAVGLAFQVVDDIL 224
Query: 274 GPTEEIEELKKLAFKLREVNSFNDE 298
T + L K A K ++ ND+
Sbjct: 225 DVTTDSATLGKTAGK----DAANDK 245
>gi|392960819|ref|ZP_10326284.1| Polyprenyl synthetase [Pelosinus fermentans DSM 17108]
gi|421054423|ref|ZP_15517391.1| Polyprenyl synthetase [Pelosinus fermentans B4]
gi|421057124|ref|ZP_15520014.1| Polyprenyl synthetase [Pelosinus fermentans B3]
gi|421067748|ref|ZP_15529192.1| Polyprenyl synthetase [Pelosinus fermentans A12]
gi|421071285|ref|ZP_15532405.1| Polyprenyl synthetase [Pelosinus fermentans A11]
gi|392440781|gb|EIW18441.1| Polyprenyl synthetase [Pelosinus fermentans B4]
gi|392447201|gb|EIW24455.1| Polyprenyl synthetase [Pelosinus fermentans A11]
gi|392448103|gb|EIW25307.1| Polyprenyl synthetase [Pelosinus fermentans A12]
gi|392454716|gb|EIW31538.1| Polyprenyl synthetase [Pelosinus fermentans DSM 17108]
gi|392463679|gb|EIW39578.1| Polyprenyl synthetase [Pelosinus fermentans B3]
Length = 292
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 99/219 (45%), Gaps = 13/219 (5%)
Query: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125
P +++E MR+ +FA + P L +AA + +GG + A L ++H S IH++LP
Sbjct: 28 PPKIFEAMRYSLFAGGKRLRPILLMAAADSIGGKGSDYLNVACGLEMIHTYSLIHDDLPA 87
Query: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185
+ K T + F +L D +L ++ + P G + +++V+ E++
Sbjct: 88 M-DDDDYRRGKLTSHKVFGEGMAILAGDGLLTAAFTVMLA--QP-GVQADVLIKVIGEIS 143
Query: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245
A G+ G++ GQ +L + K+ D++ ++ K G L GA L
Sbjct: 144 NAAGALGMIGGQVIDLSS-----EGEKI----DIDTLSYMHQAKTGALFQAAVRAGAQLA 194
Query: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKK 284
GG+E +I L Y G+ I L T E++ K
Sbjct: 195 GGAEWQIASLTEYAKQYGLAFQITDDILDVTGTQEKIGK 233
>gi|390556769|ref|ZP_10243175.1| Polyprenyl synthetase [Nitrolancetus hollandicus Lb]
gi|390174658|emb|CCF82463.1| Polyprenyl synthetase [Nitrolancetus hollandicus Lb]
Length = 326
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 32/241 (13%)
Query: 56 HLRQAVVVKEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHA 115
LRQ V V+ P V E ++ + A + P + + + + ++ + AAA + ++H
Sbjct: 20 RLRQEVDVEYPF-VGEILQGLIEAGGKRLRPLVLLLSAKPFDYDLQRLLPAAAGVELLHT 78
Query: 116 ASFIHENLPLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSG 175
AS IH++ DR L + +PT+ F T +L+ D + L A + NP
Sbjct: 79 ASLIHDDT--VDRAGL-RRGRPTLNSLFDQGTVILLGDYVFARSAMLAAETMNP------ 129
Query: 176 RILRVMVEMTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKK----KEG 231
R++ V A + +GQ +E+ + ++ T E Y++ K
Sbjct: 130 RVVGVF-----ASSLADICDGQLSEIFSAH------------QIDQTLEQYERRIYGKTA 172
Query: 232 RLHACGAACGAILGGGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLA-FKLR 290
L A A GAIL G S+ +I L RYG +GM IV L E +E+ K A LR
Sbjct: 173 SLFAGSAEMGAILAGASDDQIAALTRYGKNIGMAFQIVDDVLDLRETTDEIGKPASLDLR 232
Query: 291 E 291
+
Sbjct: 233 Q 233
>gi|282881608|ref|ZP_06290277.1| polyprenyl synthetase [Prevotella timonensis CRIS 5C-B1]
gi|281304594|gb|EFA96685.1| polyprenyl synthetase [Prevotella timonensis CRIS 5C-B1]
Length = 324
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 19/201 (9%)
Query: 64 KEPVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENL 123
+EP +YEP+ + + + P L + A L H E+ ++ A A+ H + +H++L
Sbjct: 22 REPRHLYEPIEYVLSLGGKRIRPILMMLAYNLYQEHPEEILMPACAIETYHNYTLLHDDL 81
Query: 124 PLSDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVE 183
+ + + T++ + NT +L D+ML + +A+ + ++ + +
Sbjct: 82 M---DCADLRRGCATVHKRWDANTAILSGDSMLVLAYQRMATC---RADYLKEVIDLFTQ 135
Query: 184 MTRAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAI 243
+G EGQ Q D D K + +T+ E E + K L AC GAI
Sbjct: 136 TALEIG-----EGQ-------QYDMDFEKRDDVTEDEYI-EMIRLKTSVLLACALKIGAI 182
Query: 244 LGGGSEKEIELLRRYGFYVGM 264
LGG S+++ E L R+G +G+
Sbjct: 183 LGGASQEDAENLYRFGEKIGL 203
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.134 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,029,130,157
Number of Sequences: 23463169
Number of extensions: 208790429
Number of successful extensions: 498906
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1607
Number of HSP's successfully gapped in prelim test: 4208
Number of HSP's that attempted gapping in prelim test: 491626
Number of HSP's gapped (non-prelim): 5998
length of query: 320
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 178
effective length of database: 9,027,425,369
effective search space: 1606881715682
effective search space used: 1606881715682
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)