BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020847
(320 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224124344|ref|XP_002319308.1| predicted protein [Populus trichocarpa]
gi|222857684|gb|EEE95231.1| predicted protein [Populus trichocarpa]
Length = 344
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/261 (78%), Positives = 227/261 (86%), Gaps = 3/261 (1%)
Query: 62 YGVAPDASS--DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGF 119
YG A +++ D I+SLWIGDLQ WM+E+YI SIF TGE V KVIRNKQT + EGYGF
Sbjct: 53 YGSAAGSAAVGDEIKSLWIGDLQQWMDENYILSIFSTTGEVVQAKVIRNKQTGYPEGYGF 112
Query: 120 IEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVT 179
IEFVSHAAAER+LQT+NGT MP++EQ FRLNWAT GAGERRQDDGPD+T+F+GDLAADV
Sbjct: 113 IEFVSHAAAERILQTYNGTPMPNSEQTFRLNWATLGAGERRQDDGPDYTVFIGDLAADVN 172
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
DY+LQETFR VYSSVKGAKVVTDR TGRSKGYGFVRF DE+EQ+R+M EMNG CSTRPM
Sbjct: 173 DYLLQETFRNVYSSVKGAKVVTDRVTGRSKGYGFVRFADENEQMRAMVEMNGQYCSTRPM 232
Query: 240 RIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
RIGPAATKK T QQYQKA YQ+ QG+QGE+DPNNTTIFVG LDPSVTDD L+ VF +YG
Sbjct: 233 RIGPAATKKPLT-QQYQKAAYQSPQGNQGESDPNNTTIFVGALDPSVTDDTLRAVFSKYG 291
Query: 300 ELVHVKIPAGKRCGFVQFANR 320
ELVHVKIPAGKRCGFVQFANR
Sbjct: 292 ELVHVKIPAGKRCGFVQFANR 312
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + + + ++F GE V K+ K+ GF++F + AE+ L
Sbjct: 268 TIFVGALDPSVTDDTLRAVFSKYGELVHVKIPAGKRC------GFVQFANRTCAEQALSM 321
Query: 135 FNGTQMPSTEQNFRLNW 151
NGTQ+ QN RL+W
Sbjct: 322 LNGTQIAG--QNIRLSW 336
>gi|224115306|ref|XP_002316998.1| predicted protein [Populus trichocarpa]
gi|222860063|gb|EEE97610.1| predicted protein [Populus trichocarpa]
Length = 403
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 201/248 (81%), Positives = 218/248 (87%), Gaps = 1/248 (0%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
I+SLWIGDLQ WM+E+Y+ SIF TGE V KVIRNKQT + EGYGFIEFVS AAAER+L
Sbjct: 68 IKSLWIGDLQQWMDENYLLSIFSATGEIVQAKVIRNKQTGYPEGYGFIEFVSRAAAERIL 127
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT+NGT MP++EQ FRLNWAT GAGERRQDDGPDFT+FVGDLAADV DY+LQETFR VY
Sbjct: 128 QTYNGTPMPNSEQAFRLNWATLGAGERRQDDGPDFTVFVGDLAADVNDYLLQETFRNVYP 187
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SVKGAKVVTDR TGRSKGYGF+RF DE+EQ R+M EMNG CSTRPMRIGPAATKK T
Sbjct: 188 SVKGAKVVTDRVTGRSKGYGFIRFADENEQRRAMVEMNGQYCSTRPMRIGPAATKKPLT- 246
Query: 253 QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
QQYQKATYQN QG+QGENDPNNTTIFVG LDPSVTDD L+ VF +YGELVHVKIPAGKRC
Sbjct: 247 QQYQKATYQNPQGNQGENDPNNTTIFVGALDPSVTDDTLRAVFSKYGELVHVKIPAGKRC 306
Query: 313 GFVQFANR 320
GFVQFANR
Sbjct: 307 GFVQFANR 314
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 27/184 (14%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++++GDL + + + F + V G KV+ ++ T S+GYGFI F R +
Sbjct: 163 TVFVGDLAADVNDYLLQETFRNVYPSVKGAKVVTDRVTGRSKGYGFIRFADENEQRRAMV 222
Query: 134 TFNG--------------TQMPSTEQNFRLNWATYGA--GERRQDDGPDFTIFVGDLAAD 177
NG T+ P T+Q + ATY G + ++D + TIFVG L
Sbjct: 223 EMNGQYCSTRPMRIGPAATKKPLTQQYQK---ATYQNPQGNQGENDPNNTTIFVGALDPS 279
Query: 178 VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTR 237
VTD +T RAV+S G V G K GFV+F + + ++++ +NG + +
Sbjct: 280 VTD----DTLRAVFSKY-GELVHVKIPAG--KRCGFVQFANRTSAEQALSMLNGTQIAGQ 332
Query: 238 PMRI 241
+R+
Sbjct: 333 NIRL 336
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + + + ++F GE V K+ K+ GF++F + +AE+ L
Sbjct: 270 TIFVGALDPSVTDDTLRAVFSKYGELVHVKIPAGKRC------GFVQFANRTSAEQALSM 323
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDD 163
NGTQ+ QN RL+W + ++ Q D
Sbjct: 324 LNGTQIAG--QNIRLSWGRSPSNKQVQPD 350
>gi|255563907|ref|XP_002522953.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223537765|gb|EEF39383.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 404
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/269 (75%), Positives = 226/269 (84%), Gaps = 1/269 (0%)
Query: 52 VPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQT 111
VP P+Q + A S I+SLWIGDLQ WM+E Y+ +IF TGE VS KVIRNKQT
Sbjct: 44 VPLPTQYGVAGAASGGAESSEIKSLWIGDLQQWMDEGYLFNIFSGTGEVVSAKVIRNKQT 103
Query: 112 NFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFV 171
EGYGFIEF++ AAAER+LQT+NGTQMP+TEQNFRLNWAT AGERRQDDGPD+T+FV
Sbjct: 104 GMPEGYGFIEFINRAAAERILQTYNGTQMPNTEQNFRLNWATLAAGERRQDDGPDYTVFV 163
Query: 172 GDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
GDLA DV D++LQETFR VY SVKGAKVVTDR TGR+KGYGFVRFGDE+EQ R+M EMNG
Sbjct: 164 GDLAPDVNDFILQETFRTVYPSVKGAKVVTDRLTGRTKGYGFVRFGDENEQRRAMVEMNG 223
Query: 232 VLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDIL 291
CSTR MRIGPAATKK A QQYQKA YQ+TQG+QGENDPNNTTIFVG LDPSV+D+ L
Sbjct: 224 QYCSTRAMRIGPAATKKPAV-QQYQKAPYQSTQGTQGENDPNNTTIFVGALDPSVSDEHL 282
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQFANR 320
+ VFG+YGELVHVKIPAGKRCGFVQFANR
Sbjct: 283 RQVFGKYGELVHVKIPAGKRCGFVQFANR 311
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + + ++ +FG GE V K+ K+ GF++F + A AE+ L
Sbjct: 267 TIFVGALDPSVSDEHLRQVFGKYGELVHVKIPAGKRC------GFVQFANRACAEQALLG 320
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDD 163
NGTQ+ Q+ RL+W + ++ Q D
Sbjct: 321 LNGTQLAG--QSIRLSWGRSPSNKQAQPD 347
>gi|225461001|ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Vitis vinifera]
Length = 417
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/266 (75%), Positives = 220/266 (82%), Gaps = 13/266 (4%)
Query: 62 YGVAPDASS-DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSG------KVIRNKQTNFS 114
Y AP AS+ + IRSLWIGDLQPWMEE+Y+ F T KVIRNKQT
Sbjct: 77 YVAAPQASNPEEIRSLWIGDLQPWMEENYLWGCFSQT------GEVVSVKVIRNKQTGQC 130
Query: 115 EGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDL 174
EGYGFIE + AAAER+LQT+NGT MP++EQNFRLNWAT GAGERR DD PD+TIFVGDL
Sbjct: 131 EGYGFIELATRAAAERILQTYNGTLMPNSEQNFRLNWATLGAGERRADDTPDYTIFVGDL 190
Query: 175 AADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLC 234
A+DVTDYVLQETFR Y SVKGAKVVTDRTTGRSKGYGFVRFGDE EQLR+M EMNG+ C
Sbjct: 191 ASDVTDYVLQETFRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEMNGMFC 250
Query: 235 STRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTV 294
STRPMRIGPAATKK GQQ+QKA++QNTQG+QGE+DPNNTTIFVGGLD +VTDD L+ V
Sbjct: 251 STRPMRIGPAATKKPVGGQQFQKASFQNTQGNQGESDPNNTTIFVGGLDSNVTDDYLRQV 310
Query: 295 FGQYGELVHVKIPAGKRCGFVQFANR 320
F QYGELVHVKIP GKRCGFVQFANR
Sbjct: 311 FSQYGELVHVKIPVGKRCGFVQFANR 336
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L + + Y+ +F GE V K+ K+ GF++F + A AE+ L
Sbjct: 292 TIFVGGLDSNVTDDYLRQVFSQYGELVHVKIPVGKRC------GFVQFANRACAEQALAG 345
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDD 163
NGTQ+ + Q+ RL+W + ++ Q D
Sbjct: 346 LNGTQLGA--QSIRLSWGRSPSNKQAQPD 372
>gi|356563290|ref|XP_003549897.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 402
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/274 (72%), Positives = 222/274 (81%), Gaps = 5/274 (1%)
Query: 47 WTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVI 106
W P PPSQ P S+D +R+LWIGDLQ WM+E+Y+ + F HTGE S KVI
Sbjct: 42 WAPS-AQPPSQSVAP---PQPTSADEVRTLWIGDLQYWMDENYLYTCFAHTGELASVKVI 97
Query: 107 RNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPD 166
RNKQT+ SEGYGFIEF S A AERVLQT+NGT MP+ QNFRLNWAT+ AGERR DD PD
Sbjct: 98 RNKQTSQSEGYGFIEFTSRAGAERVLQTYNGTIMPNGGQNFRLNWATFSAGERRHDDSPD 157
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
TIFVGDLAADVTDY+LQETFRA Y S KGAKVV DR TGR+KGYGFVRFGDESEQ+R+M
Sbjct: 158 HTIFVGDLAADVTDYLLQETFRARYPSAKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAM 217
Query: 227 TEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSV 286
+EM GVLCSTRPMRIGPA+ K +T Q KA+YQN QG+Q E+DPNNTTIFVG LDP+V
Sbjct: 218 SEMQGVLCSTRPMRIGPASNKNPST-QSQPKASYQNPQGAQNEHDPNNTTIFVGNLDPNV 276
Query: 287 TDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
TDD L+ VFGQYGELVHVKIPAGKRCGFVQFA+R
Sbjct: 277 TDDHLRQVFGQYGELVHVKIPAGKRCGFVQFADR 310
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G+L P + + ++ +FG GE V K+ K+ GF++F + AE L+
Sbjct: 266 TIFVGNLDPNVTDDHLRQVFGQYGELVHVKIPAGKRC------GFVQFADRSCAEEALRV 319
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDD 163
NGT + QN RL+W + ++ Q D
Sbjct: 320 LNGTLLGG--QNVRLSWGRSPSNKQAQPD 346
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 23/182 (12%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++++GDL + + + F G KV+ ++ T ++GYGF+ F + R +
Sbjct: 159 TIFVGDLAADVTDYLLQETFRARYPSAKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMS 218
Query: 134 TFNGT--------------QMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVT 179
G + PST+ + ++ G + + D + TIFVG+L +VT
Sbjct: 219 EMQGVLCSTRPMRIGPASNKNPSTQSQPKASYQN-PQGAQNEHDPNNTTIFVGNLDPNVT 277
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
D L++ F Y + K+ K GFV+F D S ++ +NG L + +
Sbjct: 278 DDHLRQVF-GQYGELVHVKIPA------GKRCGFVQFADRSCAEEALRVLNGTLLGGQNV 330
Query: 240 RI 241
R+
Sbjct: 331 RL 332
>gi|147859325|emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]
Length = 410
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/256 (76%), Positives = 214/256 (83%), Gaps = 7/256 (2%)
Query: 66 PDASS-DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVS 124
P AS+ + IRSLWIGDLQPWMEE+Y F TGE VS KVIRNKQT EGYGFIE +
Sbjct: 66 PQASNPEEIRSLWIGDLQPWMEENYXWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELAT 125
Query: 125 HAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQ 184
AAAER+LQT+NGT MP++EQNFRLNWAT GAGERR DD PD+TIFVGDLA+DVTDYVLQ
Sbjct: 126 RAAAERILQTYNGTLMPNSEQNFRLNWATLGAGERRADDTPDYTIFVGDLASDVTDYVLQ 185
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
ETFR Y SVKGAKVVTDRTTGRSKGYGFVRFGDE EQLR+M EMNG+ CSTRPMRIGPA
Sbjct: 186 ETFRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEMNGMFCSTRPMRIGPA 245
Query: 245 ATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHV 304
ATKK A++QNTQG QGE+DPNNTTIFVGGLD +VTDD L+ VF QYGELVHV
Sbjct: 246 ATKKPV------GASFQNTQGXQGESDPNNTTIFVGGLDSNVTDDYLRQVFSQYGELVHV 299
Query: 305 KIPAGKRCGFVQFANR 320
KIP GKRCGFVQFANR
Sbjct: 300 KIPVGKRCGFVQFANR 315
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L + + Y+ +F GE V K+ K+ GF++F + A AE+ L
Sbjct: 271 TIFVGGLDSNVTDDYLRQVFSQYGELVHVKIPVGKRC------GFVQFANRACAEQALAG 324
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDD 163
NGTQ+ + Q+ RL+W + ++ Q D
Sbjct: 325 LNGTQLGA--QSIRLSWGRSPSNKQAQPD 351
>gi|297799290|ref|XP_002867529.1| hypothetical protein ARALYDRAFT_913848 [Arabidopsis lyrata subsp.
lyrata]
gi|297313365|gb|EFH43788.1| hypothetical protein ARALYDRAFT_913848 [Arabidopsis lyrata subsp.
lyrata]
Length = 418
Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/252 (75%), Positives = 217/252 (86%), Gaps = 3/252 (1%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S+ IRSLWIGDLQPWMEE+Y+ +IF TG+ S KVIRNKQ+ +SEGYGFIEFV+HA A
Sbjct: 76 SAGEIRSLWIGDLQPWMEENYLMNIFSLTGDATSAKVIRNKQSGYSEGYGFIEFVNHATA 135
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
ER+LQ +NGT MPS++Q FRLNWA GAGERRQ +GP+ T+FVGDLA DVTD++L ETF+
Sbjct: 136 ERILQAYNGTTMPSSDQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFK 195
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ+R+MTEMNG CS+RPMR GPAA KK
Sbjct: 196 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQIRAMTEMNGQYCSSRPMRTGPAANKK 255
Query: 249 AATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA 308
T Q A+YQNTQG+QGE+DP NTTIFVG LD SV +D LK+VFGQ+GELVHVKIPA
Sbjct: 256 PLT---MQPASYQNTQGNQGESDPTNTTIFVGALDQSVIEDDLKSVFGQFGELVHVKIPA 312
Query: 309 GKRCGFVQFANR 320
GKRCGFVQ+ANR
Sbjct: 313 GKRCGFVQYANR 324
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L + E + S+FG GE V K+ K+ GF+++ + A AE+ L
Sbjct: 280 TIFVGALDQSVIEDDLKSVFGQFGELVHVKIPAGKRC------GFVQYANRACAEQALSL 333
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDD 163
NGTQ+ Q+ RL+W + ++ Q D
Sbjct: 334 LNGTQLGG--QSIRLSWGRSPSNKQTQPD 360
>gi|356521983|ref|XP_003529629.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 397
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/267 (73%), Positives = 218/267 (81%), Gaps = 4/267 (1%)
Query: 54 PPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF 113
PPSQ P S+D +R+LWIGDLQ WM+E+Y+ + HTGE S KVIRNKQT+
Sbjct: 44 PPSQSVAP---PQPTSADEVRTLWIGDLQYWMDENYLYTCLAHTGEVASVKVIRNKQTSQ 100
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGD 173
SEGYGFIEF S A AERVLQT+NGT MP+ QNFRLNWAT AGERR DD PD TIFVGD
Sbjct: 101 SEGYGFIEFTSRAGAERVLQTYNGTIMPNGGQNFRLNWATLSAGERRHDDSPDHTIFVGD 160
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
LAADVTDY+LQETFRA Y S+KGAKVV DR TGR+KGYGFVRFGDESEQ+R+MTEM GVL
Sbjct: 161 LAADVTDYLLQETFRARYPSIKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMTEMQGVL 220
Query: 234 CSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKT 293
CSTRPMRIGPA+ K +T Q KA+YQN QG+Q E+DPNNTTIFVG LDP+VTDD L+
Sbjct: 221 CSTRPMRIGPASNKNPST-QSQPKASYQNPQGAQNEHDPNNTTIFVGNLDPNVTDDHLRQ 279
Query: 294 VFGQYGELVHVKIPAGKRCGFVQFANR 320
VFG YGELVHVKIPAGKRCGFVQFA+R
Sbjct: 280 VFGHYGELVHVKIPAGKRCGFVQFADR 306
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G+L P + + ++ +FGH GE V K+ K+ GF++F + AE L+
Sbjct: 262 TIFVGNLDPNVTDDHLRQVFGHYGELVHVKIPAGKRC------GFVQFADRSCAEEALRV 315
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDD 163
NGT + QN RL+W + ++ Q D
Sbjct: 316 LNGTLLGG--QNVRLSWGRSPSNKQAQPD 342
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 81/182 (44%), Gaps = 23/182 (12%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++++GDL + + + F + G KV+ ++ T ++GYGF+ F + R +
Sbjct: 155 TIFVGDLAADVTDYLLQETFRARYPSIKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMT 214
Query: 134 TFNGT--------------QMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVT 179
G + PST+ + ++ G + + D + TIFVG+L +VT
Sbjct: 215 EMQGVLCSTRPMRIGPASNKNPSTQSQPKASYQN-PQGAQNEHDPNNTTIFVGNLDPNVT 273
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
D L++ F Y + K+ K GFV+F D S ++ +NG L + +
Sbjct: 274 DDHLRQVF-GHYGELVHVKIPA------GKRCGFVQFADRSCAEEALRVLNGTLLGGQNV 326
Query: 240 RI 241
R+
Sbjct: 327 RL 328
>gi|449454734|ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP45B-like [Cucumis
sativus]
Length = 404
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/273 (71%), Positives = 222/273 (81%), Gaps = 13/273 (4%)
Query: 48 TPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIR 107
+PQ PP S A+ D +R+LWIGDLQ WM+E+YI + F HTGE S KVIR
Sbjct: 51 SPQGQPPQS-----------ANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIR 99
Query: 108 NKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDF 167
NKQT SEGYGFIEF++ AAERVLQT+NGT MP+ QNFRLNWA+ AGE+RQDD PD+
Sbjct: 100 NKQTGQSEGYGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWAS--AGEKRQDDSPDY 157
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
TIFVGDLA DVTDYVLQETFRA Y+SVKGAKVV DR TGR+KGYGFV+FGDESEQ+R+MT
Sbjct: 158 TIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMT 217
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
EMNGV CS+RPMRIGPAA K + GQQ+ K +YQN QG+Q ENDPNNTTIFVG LD +VT
Sbjct: 218 EMNGVHCSSRPMRIGPAANKNTSGGQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVT 277
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
D+ L+ VFGQYGELVHVKIP GKRCGFVQFA+R
Sbjct: 278 DEHLRQVFGQYGELVHVKIPVGKRCGFVQFADR 310
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G+L + + ++ +FG GE V K+ K+ GF++F AE L+
Sbjct: 266 TIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGKRC------GFVQFADRNCAEEALRV 319
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDD 163
NGTQ+ QN RL+W + ++ Q D
Sbjct: 320 LNGTQIGG--QNIRLSWGRSPSNKQPQAD 346
>gi|356555656|ref|XP_003546146.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 411
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/288 (70%), Positives = 228/288 (79%), Gaps = 15/288 (5%)
Query: 36 QHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFG 95
QHQ P P W P PP QQ AS+D +R+LWIGDLQ WM+E+Y+ + F
Sbjct: 40 QHQAPQP---MWAPSAQPPLPQQP--------ASADEVRTLWIGDLQYWMDENYLYTCFA 88
Query: 96 HTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG 155
HTGE S KVIRNKQT+ SEGYGFIEF S A AER+LQT+NG MP+ Q+FRLNWAT+
Sbjct: 89 HTGEVSSVKVIRNKQTSQSEGYGFIEFNSRAGAERILQTYNGAIMPNGGQSFRLNWATFS 148
Query: 156 AGER-RQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFV 214
AGER RQDD PD+TIFVGDLAADVTDY+LQETFRA Y+SVKGAKVV DR TGR+KGYGFV
Sbjct: 149 AGERSRQDDSPDYTIFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRTKGYGFV 208
Query: 215 RFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNT--QGSQGENDP 272
RF +ESEQ+R+MTEM GVLCSTRPMRIGPA+ K AT Q KA+Y N+ QGSQ ENDP
Sbjct: 209 RFSEESEQMRAMTEMQGVLCSTRPMRIGPASNKTPAT-QSQPKASYLNSQPQGSQNENDP 267
Query: 273 NNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
NNTTIFVG LDP+VTDD L+ VF QYGELVHVKIPAGKRCGFVQFA+R
Sbjct: 268 NNTTIFVGNLDPNVTDDHLRQVFSQYGELVHVKIPAGKRCGFVQFADR 315
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 84/183 (45%), Gaps = 23/183 (12%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++++GDL + + + F V G KV+ ++ T ++GYGF+ F + R +
Sbjct: 162 TIFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVRFSEESEQMRAMT 221
Query: 134 TFNGT--------------QMPSTEQNFRLNWA-TYGAGERRQDDGPDFTIFVGDLAADV 178
G + P+T+ + ++ + G + ++D + TIFVG+L +V
Sbjct: 222 EMQGVLCSTRPMRIGPASNKTPATQSQPKASYLNSQPQGSQNENDPNNTTIFVGNLDPNV 281
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
TD L++ F + Y + K+ K GFV+F D S ++ +NG L +
Sbjct: 282 TDDHLRQVF-SQYGELVHVKIPA------GKRCGFVQFADRSCAEEALRVLNGTLLGGQN 334
Query: 239 MRI 241
+R+
Sbjct: 335 VRL 337
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G+L P + + ++ +F GE V K+ K+ GF++F + AE L+
Sbjct: 271 TIFVGNLDPNVTDDHLRQVFSQYGELVHVKIPAGKRC------GFVQFADRSCAEEALRV 324
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDD 163
NGT + QN RL+W + ++ Q D
Sbjct: 325 LNGTLLGG--QNVRLSWGRSPSNKQAQAD 351
>gi|357480263|ref|XP_003610417.1| RNA-binding protein [Medicago truncatula]
gi|355511472|gb|AES92614.1| RNA-binding protein [Medicago truncatula]
Length = 411
Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/275 (69%), Positives = 221/275 (80%), Gaps = 8/275 (2%)
Query: 47 WTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVI 106
W P PP Q V P +S+D +++LWIGDLQ WM+E+Y+ + F HTGE S KVI
Sbjct: 52 WAPNAQPP-----QQSAVPPPSSADEVKTLWIGDLQYWMDENYLYNCFSHTGEVGSVKVI 106
Query: 107 RNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPD 166
RNKQTN SEGYGF+EF+S A AERVLQTFNGT MP+ QNFRLNWAT+ +GE+R DD PD
Sbjct: 107 RNKQTNQSEGYGFLEFISRAGAERVLQTFNGTIMPNGGQNFRLNWATFSSGEKRHDDSPD 166
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
+TIFVGDLAADV+D+ L E FR Y+SVKGAKVV DRTTGR+KGYGFVRF DESEQ+R+M
Sbjct: 167 YTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRFADESEQMRAM 226
Query: 227 TEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQ-GSQGENDPNNTTIFVGGLDPS 285
TEM GVLCSTRPMRIGPA+ K T Q KA+YQN Q G+Q ENDPNNTTIFVG LDP+
Sbjct: 227 TEMQGVLCSTRPMRIGPASNKNLGT--QTSKASYQNPQGGAQNENDPNNTTIFVGNLDPN 284
Query: 286 VTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
VTD+ LK VF QYGELVHVKIP+GKRCGFVQFA+R
Sbjct: 285 VTDEHLKQVFTQYGELVHVKIPSGKRCGFVQFADR 319
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 85/181 (46%), Gaps = 21/181 (11%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++++GDL + + ++ +F V G KV+ ++ T ++GYGF+ F + R +
Sbjct: 168 TIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRFADESEQMRAMT 227
Query: 134 TFNGTQM--------PSTEQNF-----RLNWATYGAGERRQDDGPDFTIFVGDLAADVTD 180
G P++ +N + ++ G + ++D + TIFVG+L +VTD
Sbjct: 228 EMQGVLCSTRPMRIGPASNKNLGTQTSKASYQNPQGGAQNENDPNNTTIFVGNLDPNVTD 287
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L++ F Y + K+ + + G FV+F D S ++ +NG L + +R
Sbjct: 288 EHLKQVFTQ-YGELVHVKIPSGKRCG------FVQFADRSSAEEALRVLNGTLLGGQNVR 340
Query: 241 I 241
+
Sbjct: 341 L 341
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 60 QPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGF 119
P G A + + ++++G+L P + + ++ +F GE V K+ K+ GF
Sbjct: 260 NPQGGAQNENDPNNTTIFVGNLDPNVTDEHLKQVFTQYGELVHVKIPSGKRC------GF 313
Query: 120 IEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDD 163
++F ++AE L+ NGT + QN RL+W A ++ Q D
Sbjct: 314 VQFADRSSAEEALRVLNGTLLGG--QNVRLSWGRSPANKQTQQD 355
>gi|18416906|ref|NP_567764.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75331668|sp|Q93W34.1|RP45C_ARATH RecName: Full=Polyadenylate-binding protein RBP45C;
Short=Poly(A)-binding protein RBP45C; AltName:
Full=RNA-binding protein 45C; Short=AtRBP45C
gi|13878153|gb|AAK44154.1|AF370339_1 putative DNA binding protein [Arabidopsis thaliana]
gi|15450814|gb|AAK96678.1| putative DNA binding protein [Arabidopsis thaliana]
gi|17104569|gb|AAL34173.1| putative DNA binding protein [Arabidopsis thaliana]
gi|20259888|gb|AAM13291.1| putative DNA binding protein [Arabidopsis thaliana]
gi|332659882|gb|AEE85282.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 415
Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/252 (73%), Positives = 214/252 (84%), Gaps = 3/252 (1%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S+ IRSLWIGDLQPWM+E+Y+ ++FG TGE + KVIRNKQ +SEGYGFIEFV+HA A
Sbjct: 75 SAGEIRSLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATA 134
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
ER LQT+NG MPS+EQ FRLNWA GAGERRQ +GP+ T+FVGDLA DVTD++L ETF+
Sbjct: 135 ERNLQTYNGAPMPSSEQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFK 194
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
AVYSSVKGAKVV DRTTGRSKGYGFVRF DESEQ+R+MTEMNG CS+RPMR GPAA KK
Sbjct: 195 AVYSSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSSRPMRTGPAANKK 254
Query: 249 AATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA 308
T Q A+YQNTQG+ GE+DP NTTIFVG +D SVT+D LK+VFGQ+GELVHVKIPA
Sbjct: 255 PLT---MQPASYQNTQGNSGESDPTNTTIFVGAVDQSVTEDDLKSVFGQFGELVHVKIPA 311
Query: 309 GKRCGFVQFANR 320
GKRCGFVQ+ANR
Sbjct: 312 GKRCGFVQYANR 323
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G + + E + S+FG GE V K+ K+ GF+++ + A AE+ L
Sbjct: 279 TIFVGAVDQSVTEDDLKSVFGQFGELVHVKIPAGKRC------GFVQYANRACAEQALSV 332
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDD 163
NGTQ+ Q+ RL+W + ++ Q D
Sbjct: 333 LNGTQLGG--QSIRLSWGRSPSNKQTQPD 359
>gi|449454730|ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
gi|449472157|ref|XP_004153511.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
Length = 408
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/272 (70%), Positives = 220/272 (80%), Gaps = 8/272 (2%)
Query: 49 PQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRN 108
PQ P Q QP A+ D +R+LWIGDLQ WM+E+YI + F HTGE S KVIRN
Sbjct: 47 PQAGSPQGQPPQP------ANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRN 100
Query: 109 KQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT 168
KQT SEGYGFIEF++ AAERVLQT+NGT MP+ QNFRLNWA+ AGE+RQDD PD+T
Sbjct: 101 KQTGQSEGYGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWAS--AGEKRQDDSPDYT 158
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE 228
IFVGDLA DVTDYVLQETFRA Y+SVKGAKVV DR TGR+KGYGFV+FGDESEQ+R+MTE
Sbjct: 159 IFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQIRAMTE 218
Query: 229 MNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTD 288
MNGV CS+RPMRIGPAA K + QQ+ K +YQN G+Q ENDPNNTTIFVG LD +VTD
Sbjct: 219 MNGVHCSSRPMRIGPAANKNTSGSQQFSKTSYQNPPGTQNENDPNNTTIFVGNLDSNVTD 278
Query: 289 DILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
+ L+ VF QYGELVHVKIPAGKRCGFVQF++R
Sbjct: 279 EHLRQVFSQYGELVHVKIPAGKRCGFVQFSDR 310
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G+L + + ++ +F GE V K+ K+ GF++F + AE L+
Sbjct: 266 TIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRC------GFVQFSDRSCAEEALRI 319
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDD 163
NGT P QN RL+W + ++ Q D
Sbjct: 320 LNGT--PIGGQNIRLSWGRSPSNKQPQAD 346
>gi|224078632|ref|XP_002305583.1| predicted protein [Populus trichocarpa]
gi|222848547|gb|EEE86094.1| predicted protein [Populus trichocarpa]
Length = 382
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/253 (73%), Positives = 214/253 (84%), Gaps = 2/253 (0%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A++D +R+LWIGDLQ WM+E+YIAS F HTGE S K+IRNKQT+ EGYGFIE SH A
Sbjct: 44 ATADEVRTLWIGDLQYWMDENYIASCFAHTGEVASVKIIRNKQTSQIEGYGFIEMTSHGA 103
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
AER+LQT+NGT MP+ EQNFRLNWA++ G++R DD PDFTIFVGDLAADVTD++LQETF
Sbjct: 104 AERILQTYNGTPMPNGEQNFRLNWASFSGGDKR-DDSPDFTIFVGDLAADVTDFMLQETF 162
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
RA + SVKGAKVV DR TGR+KGYGFVRFGDESEQLR+MTEMNG CSTRPMR+G A+ K
Sbjct: 163 RAHFPSVKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGAFCSTRPMRVGLASNK 222
Query: 248 KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP 307
KA GQQY KA+YQN Q Q + DPNNTTIFVG LD +V DD LK +FGQYG+L+HVKIP
Sbjct: 223 KAVVGQQYPKASYQNPQ-PQNDGDPNNTTIFVGNLDSNVMDDHLKELFGQYGQLLHVKIP 281
Query: 308 AGKRCGFVQFANR 320
AGKRCGFVQFA+R
Sbjct: 282 AGKRCGFVQFADR 294
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 21/181 (11%)
Query: 75 SLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++++GDL + + + F H KV+ ++ T ++GYGF+ F + R +
Sbjct: 143 TIFVGDLAADVTDFMLQETFRAHFPSVKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT 202
Query: 134 TFNGTQMPSTEQNFRLN------------WATYGAGERRQDDGPD-FTIFVGDLAADVTD 180
NG + L A+Y + + D P+ TIFVG+L ++V D
Sbjct: 203 EMNGAFCSTRPMRVGLASNKKAVVGQQYPKASYQNPQPQNDGDPNNTTIFVGNLDSNVMD 262
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L+E F Y + K+ K GFV+F D S ++ +NG S + +R
Sbjct: 263 DHLKELF-GQYGQLLHVKIPA------GKRCGFVQFADRSSAEEALKMLNGAQLSGQNIR 315
Query: 241 I 241
+
Sbjct: 316 L 316
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G+L + + ++ +FG G+ + K+ K+ GF++F ++AE L+
Sbjct: 250 TIFVGNLDSNVMDDHLKELFGQYGQLLHVKIPAGKRC------GFVQFADRSSAEEALKM 303
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDG 164
NG Q+ + QN RL+W + ++ Q D
Sbjct: 304 LNGAQL--SGQNIRLSWGRNPSNKQAQPDA 331
>gi|388507756|gb|AFK41944.1| unknown [Medicago truncatula]
Length = 411
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/275 (69%), Positives = 220/275 (80%), Gaps = 8/275 (2%)
Query: 47 WTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVI 106
W P PP Q V P +S+D + +LWIGDLQ WM+E+Y+ + F HTGE S KVI
Sbjct: 52 WAPNAQPP-----QQSAVPPPSSADEVETLWIGDLQYWMDENYLYNCFSHTGEVGSVKVI 106
Query: 107 RNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPD 166
RNKQTN SEGYGF+EF+S A AERVLQTFNGT MP+ QNFRLNWAT+ +GE+R DD PD
Sbjct: 107 RNKQTNQSEGYGFLEFISRAGAERVLQTFNGTIMPNGGQNFRLNWATFSSGEKRHDDSPD 166
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
+TIFVGDLAADV+D+ L E FR Y+SVKGAKVV DRTTGR+KGYGFVRF DESEQ+R+M
Sbjct: 167 YTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRFADESEQMRAM 226
Query: 227 TEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQ-GSQGENDPNNTTIFVGGLDPS 285
TEM GVLCSTRPMRIGPA+ K T Q KA+YQN Q G+Q ENDPNNTTIFVG LDP+
Sbjct: 227 TEMQGVLCSTRPMRIGPASNKNLGT--QTSKASYQNPQGGAQNENDPNNTTIFVGNLDPN 284
Query: 286 VTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
VTD+ LK VF QYGELVHVKIP+GKRCGFVQFA+R
Sbjct: 285 VTDEHLKQVFTQYGELVHVKIPSGKRCGFVQFADR 319
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 85/181 (46%), Gaps = 21/181 (11%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++++GDL + + ++ +F V G KV+ ++ T ++GYGF+ F + R +
Sbjct: 168 TIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRFADESEQMRAMT 227
Query: 134 TFNGTQM--------PSTEQNF-----RLNWATYGAGERRQDDGPDFTIFVGDLAADVTD 180
G P++ +N + ++ G + ++D + TIFVG+L +VTD
Sbjct: 228 EMQGVLCSTRPMRIGPASNKNLGTQTSKASYQNPQGGAQNENDPNNTTIFVGNLDPNVTD 287
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L++ F Y + K+ + + G FV+F D S ++ +NG L + +R
Sbjct: 288 EHLKQVFTQ-YGELVHVKIPSGKRCG------FVQFADRSSAEEALRVLNGTLLGGQNVR 340
Query: 241 I 241
+
Sbjct: 341 L 341
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 60 QPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGF 119
P G A + + ++++G+L P + + ++ +F GE V K+ K+ GF
Sbjct: 260 NPQGGAQNENDPNNTTIFVGNLDPNVTDEHLKQVFTQYGELVHVKIPSGKRC------GF 313
Query: 120 IEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDD 163
++F ++AE L+ NGT + QN RL+W A ++ Q D
Sbjct: 314 VQFADRSSAEEALRVLNGTLLGG--QNVRLSWGRSPANKQTQQD 355
>gi|4455223|emb|CAB36546.1| putative DNA binding protein [Arabidopsis thaliana]
gi|7269553|emb|CAB79555.1| putative DNA binding protein [Arabidopsis thaliana]
Length = 427
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/252 (73%), Positives = 214/252 (84%), Gaps = 3/252 (1%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S+ IRSLWIGDLQPWM+E+Y+ ++FG TGE + KVIRNKQ +SEGYGFIEFV+HA A
Sbjct: 75 SAGEIRSLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATA 134
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
ER LQT+NG MPS+EQ FRLNWA GAGERRQ +GP+ T+FVGDLA DVTD++L ETF+
Sbjct: 135 ERNLQTYNGAPMPSSEQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFK 194
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
AVYSSVKGAKVV DRTTGRSKGYGFVRF DESEQ+R+MTEMNG CS+RPMR GPAA KK
Sbjct: 195 AVYSSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSSRPMRTGPAANKK 254
Query: 249 AATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA 308
T Q A+YQNTQG+ GE+DP NTTIFVG +D SVT+D LK+VFGQ+GELVHVKIPA
Sbjct: 255 PLT---MQPASYQNTQGNSGESDPTNTTIFVGAVDQSVTEDDLKSVFGQFGELVHVKIPA 311
Query: 309 GKRCGFVQFANR 320
GKRCGFVQ+ANR
Sbjct: 312 GKRCGFVQYANR 323
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G + + E + S+FG GE V K+ K+ GF+++ + A AE+ L
Sbjct: 279 TIFVGAVDQSVTEDDLKSVFGQFGELVHVKIPAGKRC------GFVQYANRACAEQALSV 332
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDD 163
NGTQ+ Q+ RL+W + ++ Q D
Sbjct: 333 LNGTQLGG--QSIRLSWGRSPSNKQTQPD 359
>gi|356548971|ref|XP_003542872.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 409
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/253 (74%), Positives = 213/253 (84%), Gaps = 4/253 (1%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +R+LWIGDLQ WM+E+Y+ + F HTGE S KVIRNKQT+ SEGYGFIEF S A AER
Sbjct: 63 DEVRTLWIGDLQYWMDENYLYTCFAHTGEVTSVKVIRNKQTSQSEGYGFIEFNSRAGAER 122
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGER-RQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
+LQT+NG MP+ Q+FRLNWAT+ AGER R DD PD+TIFVGDLAADVTDY+LQETFRA
Sbjct: 123 ILQTYNGAIMPNGGQSFRLNWATFSAGERSRHDDSPDYTIFVGDLAADVTDYLLQETFRA 182
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA 249
Y+SVKGAKVV DR TGR+KGYGFVRF DESEQ+R+MTEM GVLCSTRPMRIGPA+ K
Sbjct: 183 RYNSVKGAKVVIDRLTGRTKGYGFVRFSDESEQVRAMTEMQGVLCSTRPMRIGPASNKTP 242
Query: 250 ATGQQYQKATYQNT--QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP 307
T Q KA+YQN+ QGSQ ENDPNNTTIFVG LDP+VTDD L+ VF QYGELVHVKIP
Sbjct: 243 TT-QSQPKASYQNSQPQGSQNENDPNNTTIFVGNLDPNVTDDHLRQVFSQYGELVHVKIP 301
Query: 308 AGKRCGFVQFANR 320
AGKRCGFVQFA+R
Sbjct: 302 AGKRCGFVQFADR 314
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 84/183 (45%), Gaps = 23/183 (12%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++++GDL + + + F V G KV+ ++ T ++GYGF+ F + R +
Sbjct: 161 TIFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVRFSDESEQVRAMT 220
Query: 134 TFNGT--------------QMPSTEQNFRLNW-ATYGAGERRQDDGPDFTIFVGDLAADV 178
G + P+T+ + ++ + G + ++D + TIFVG+L +V
Sbjct: 221 EMQGVLCSTRPMRIGPASNKTPTTQSQPKASYQNSQPQGSQNENDPNNTTIFVGNLDPNV 280
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
TD L++ F + Y + K+ K GFV+F D S ++ +NG L +
Sbjct: 281 TDDHLRQVF-SQYGELVHVKIPA------GKRCGFVQFADRSCAEEALRVLNGTLLGGQN 333
Query: 239 MRI 241
+R+
Sbjct: 334 VRL 336
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
Query: 57 QQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG 116
Q +QP G + + ++++G+L P + + ++ +F GE V K+ K+
Sbjct: 253 QNSQPQGSQNENDPNNT-TIFVGNLDPNVTDDHLRQVFSQYGELVHVKIPAGKRC----- 306
Query: 117 YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDD 163
GF++F + AE L+ NGT + QN RL+W + ++ Q D
Sbjct: 307 -GFVQFADRSCAEEALRVLNGTLLGG--QNVRLSWGRSPSNKQAQAD 350
>gi|365192966|gb|AEW68341.1| putative nuclear acid binding protein [Medicago sativa]
Length = 409
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/275 (68%), Positives = 217/275 (78%), Gaps = 8/275 (2%)
Query: 47 WTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVI 106
W P PP Q V P S+D +++LWIGDLQ WM+E+Y+ + F HTGE S KVI
Sbjct: 50 WAPNTQPP-----QQSAVPPPTSADEVKTLWIGDLQYWMDENYLYNCFSHTGEVGSVKVI 104
Query: 107 RNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPD 166
RNK N SEGYGF+EF+S A AERVLQT+NGT MP+ QNFRLNWAT+ +GE+R DD PD
Sbjct: 105 RNKLNNQSEGYGFLEFISRAGAERVLQTYNGTIMPNGGQNFRLNWATFSSGEKRHDDSPD 164
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
+TIFVGDLAADV+D+ L E FR Y+SVKGAKVV DR TGRSKGYGFVRF DESEQ+R+M
Sbjct: 165 YTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRNTGRSKGYGFVRFADESEQMRAM 224
Query: 227 TEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQ-GSQGENDPNNTTIFVGGLDPS 285
TEM GVLCSTRPMRIGPA+ K T Q KA+YQN Q G+Q ENDPNNTTIFVG LDP+
Sbjct: 225 TEMQGVLCSTRPMRIGPASNKNLGT--QTSKASYQNPQGGAQNENDPNNTTIFVGNLDPN 282
Query: 286 VTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
VTD+ LK VF QYGELVHVKIP+GKRCGFVQFA+R
Sbjct: 283 VTDEHLKQVFTQYGELVHVKIPSGKRCGFVQFADR 317
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 21/181 (11%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++++GDL + + ++ +F V G KV+ ++ T S+GYGF+ F + R +
Sbjct: 166 TIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRNTGRSKGYGFVRFADESEQMRAMT 225
Query: 134 TFNGTQM--------PSTEQNF-----RLNWATYGAGERRQDDGPDFTIFVGDLAADVTD 180
G P++ +N + ++ G + ++D + TIFVG+L +VTD
Sbjct: 226 EMQGVLCSTRPMRIGPASNKNLGTQTSKASYQNPQGGAQNENDPNNTTIFVGNLDPNVTD 285
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L++ F Y + K+ + + G FV+F D S ++ +NG L + +R
Sbjct: 286 EHLKQVFTQ-YGELVHVKIPSGKRCG------FVQFADRSSAEEALRVLNGTLLGGQNVR 338
Query: 241 I 241
+
Sbjct: 339 L 339
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 60 QPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGF 119
P G A + + ++++G+L P + + ++ +F GE V K+ K+ GF
Sbjct: 258 NPQGGAQNENDPNNTTIFVGNLDPNVTDEHLKQVFTQYGELVHVKIPSGKRC------GF 311
Query: 120 IEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDD 163
++F ++AE L+ NGT + QN RL+W A ++ Q D
Sbjct: 312 VQFADRSSAEEALRVLNGTLLGG--QNVRLSWGRSPANKQTQQD 353
>gi|84468322|dbj|BAE71244.1| putative DNA binding protein [Trifolium pratense]
Length = 402
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/291 (68%), Positives = 225/291 (77%), Gaps = 7/291 (2%)
Query: 34 QQQHQTPVPPPVGWTPQPVPPP--SQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIA 91
QQ HQ P P P P +Q QP AS+D +R+LWIGDLQ WM+E+Y+
Sbjct: 17 QQYHQAPPQQPYVMMPPQAPQALWAQSAQP--PQQPASADEVRTLWIGDLQYWMDENYLY 74
Query: 92 SIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNW 151
+ FG+TGE S KVIRNKQT+ SEGYGFIEF + A+AERVLQT+ G MP+ Q++RLNW
Sbjct: 75 TCFGNTGEVTSVKVIRNKQTSQSEGYGFIEFNTRASAERVLQTYQGAIMPNGGQSYRLNW 134
Query: 152 ATYGAGER--RQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSK 209
AT+ AGER RQDDGPD TIFVGDLAADVTDY+LQETFRA Y+SVKGAKVV DR TGRSK
Sbjct: 135 ATFSAGERSSRQDDGPDHTIFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRSK 194
Query: 210 GYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGE 269
GYGFVRF DE EQ+R+MTEM GVLCSTRPMRIGPA K A Q KA+Y NT G Q E
Sbjct: 195 GYGFVRFADEGEQMRAMTEMQGVLCSTRPMRIGPATNKNPAATTQ-AKASYSNTPGGQSE 253
Query: 270 NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
NDPNNTTIFVG LDP+VTDD L+ VF QYGELVHVKIP+GKRCGFVQF++R
Sbjct: 254 NDPNNTTIFVGNLDPNVTDDHLRQVFSQYGELVHVKIPSGKRCGFVQFSDR 304
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 21/182 (11%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
++++GDL + + + F V G KV+ ++ T S+GYGF+ F R +
Sbjct: 152 HTIFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRSKGYGFVRFADEGEQMRAM 211
Query: 133 QTFNGTQM--------PSTEQNFRLNW---ATYG--AGERRQDDGPDFTIFVGDLAADVT 179
G P+T +N A+Y G + ++D + TIFVG+L +VT
Sbjct: 212 TEMQGVLCSTRPMRIGPATNKNPAATTQAKASYSNTPGGQSENDPNNTTIFVGNLDPNVT 271
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
D L++ F + Y + K+ + K GFV+F D S ++ +NG L + +
Sbjct: 272 DDHLRQVF-SQYGELVHVKIPS------GKRCGFVQFSDRSSAEEAIRVLNGTLLGGQNV 324
Query: 240 RI 241
R+
Sbjct: 325 RL 326
>gi|255554923|ref|XP_002518499.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223542344|gb|EEF43886.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 430
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/253 (72%), Positives = 212/253 (83%), Gaps = 2/253 (0%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
++D +R+LWIGDLQ WM+E+YI S F HTGE S KVIRNKQT EGYGFIEF SH A
Sbjct: 84 NADEVRTLWIGDLQYWMDENYINSCFAHTGEVTSVKVIRNKQTGQVEGYGFIEFGSHGTA 143
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
ER+LQT+NGT MP+ EQNFRLNWA++ G++R DD PDFTIFVGDLAADVTDY+LQ+TFR
Sbjct: 144 ERILQTYNGTPMPNGEQNFRLNWASFSGGDKR-DDTPDFTIFVGDLAADVTDYILQDTFR 202
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
Y SVKGAKVV DR TGR+KGYGFVRFGDESEQ+R+MT+MNG CSTRPMRIG A K
Sbjct: 203 VHYPSVKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMTDMNGAFCSTRPMRIGLATNKN 262
Query: 249 AATGQQYQKATYQNTQG-SQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP 307
A TGQQY KA+YQN+Q + ENDPNNTTIFVG LD +VTDD L+ +FG+YG+L+HVKIP
Sbjct: 263 AVTGQQYPKASYQNSQTQGENENDPNNTTIFVGNLDSNVTDDNLRELFGRYGQLLHVKIP 322
Query: 308 AGKRCGFVQFANR 320
AGKRCGFVQFA+R
Sbjct: 323 AGKRCGFVQFADR 335
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 86/214 (40%), Gaps = 33/214 (15%)
Query: 75 SLWIGDLQPWMEESYIASIFG-HTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++++GDL + + + F H KV+ ++ T ++GYGF+ F + R +
Sbjct: 182 TIFVGDLAADVTDYILQDTFRVHYPSVKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMT 241
Query: 134 TFNGTQMPSTEQNFRL------------------NWATYGAGERRQDDGPDFTIFVGDLA 175
NG + L N T G E +D + TIFVG+L
Sbjct: 242 DMNGAFCSTRPMRIGLATNKNAVTGQQYPKASYQNSQTQGENE---NDPNNTTIFVGNLD 298
Query: 176 ADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCS 235
++VTD L+E F Y + K+ + G FV+F D S ++ +NG S
Sbjct: 299 SNVTDDNLRELF-GRYGQLLHVKIPAGKRCG------FVQFADRSCAEEALRLLNGTSLS 351
Query: 236 TRPMRI----GPAATKKAATGQQYQKATYQNTQG 265
+ +R+ P+ + Q+ Y QG
Sbjct: 352 GQSIRLSWGRSPSNKQPQPDANQWNAGYYGYAQG 385
>gi|297844004|ref|XP_002889883.1| ATRBP45B [Arabidopsis lyrata subsp. lyrata]
gi|297335725|gb|EFH66142.1| ATRBP45B [Arabidopsis lyrata subsp. lyrata]
Length = 408
Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/322 (63%), Positives = 230/322 (71%), Gaps = 16/322 (4%)
Query: 1 MMQQPPSQPSDQTSQYQQQHQQWMAYQQQSQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQ 60
MMQQPP QQ YQQ S P PP W PQ PPS Q
Sbjct: 1 MMQQPPPGGILPHHAPPPSAQQQYGYQQPSPYGIAGAAPP--PPQMWNPQAAAPPSAQPM 58
Query: 61 PYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFI 120
+ D IR+LWIGDLQ WM+E+++ F HTGE VS KVIRNKQT EGYGFI
Sbjct: 59 --------TVDEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFI 110
Query: 121 EFVSHAAAERVLQTFNGTQMPS-TEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVT 179
EF SHAAAERVLQTFN +PS +Q FRLNWA+ +G++R DD PD+TIFVGDLAADVT
Sbjct: 111 EFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKR-DDSPDYTIFVGDLAADVT 169
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
DY+L ETFRA Y SVKGAKVV DR TGR+KGYGFVRF DESEQ+R+MTEMNGV CSTRPM
Sbjct: 170 DYILLETFRASYPSVKGAKVVIDRATGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPM 229
Query: 240 RIGPAATKKAATGQQYQKATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQY 298
RIGPAA+KK TG Q+ +YQ+ G +NDPNNTT+FVGGLD SVTDD LK VFGQY
Sbjct: 230 RIGPAASKKGVTG---QRDSYQSAAGGVPTDNDPNNTTVFVGGLDQSVTDDHLKNVFGQY 286
Query: 299 GELVHVKIPAGKRCGFVQFANR 320
GE+VHVKIPAGKRCGFVQF+ +
Sbjct: 287 GEIVHVKIPAGKRCGFVQFSEK 308
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 93/220 (42%), Gaps = 30/220 (13%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++++GDL + + + F + V G KV+ ++ T ++GYGF+ F + R +
Sbjct: 158 TIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRATGRTKGYGFVRFSDESEQIRAMT 217
Query: 134 TFNGTQMPSTEQNFRL--------------NWATYGAGERRQDDGPDFTIFVGDLAADVT 179
NG +P + + R+ ++ + G +D + T+FVG L VT
Sbjct: 218 EMNG--VPCSTRPMRIGPAASKKGVTGQRDSYQSAAGGVPTDNDPNNTTVFVGGLDQSVT 275
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
D L+ F Y + K+ + G FV+F ++S ++ +NGV +
Sbjct: 276 DDHLKNVF-GQYGEIVHVKIPAGKRCG------FVQFSEKSCAEEALRMLNGVQLGGTTV 328
Query: 240 RIG---PAATKKAATGQQYQKATY---QNTQGSQGENDPN 273
R+ + K++A Q+ Y Q G DPN
Sbjct: 329 RLSWGRSPSNKQSADPSQFYYGGYGQGQEQYGYTMPQDPN 368
>gi|30682335|ref|NP_849641.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332190644|gb|AEE28765.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 306
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/281 (67%), Positives = 219/281 (77%), Gaps = 14/281 (4%)
Query: 42 PPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFV 101
PPP W PQ PPS Q ++D IR+LWIGDLQ WM+E+++ F HTGE V
Sbjct: 38 PPPQMWNPQAAAPPSVQP--------TTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMV 89
Query: 102 SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPS-TEQNFRLNWATYGAGERR 160
S KVIRNKQT EGYGFIEF SHAAAERVLQTFN +PS +Q FRLNWA+ +G++R
Sbjct: 90 SAKVIRNKQTGQVEGYGFIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKR 149
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
DD PD+TIFVGDLAADVTDY+L ETFRA Y SVKGAKVV DR TGR+KGYGFVRF DES
Sbjct: 150 -DDSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDES 208
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNT-QGSQGENDPNNTTIFV 279
EQ+R+MTEMNGV CSTRPMRIGPAA+KK TG Q+ +YQ++ G +NDPNNTT+FV
Sbjct: 209 EQIRAMTEMNGVPCSTRPMRIGPAASKKGVTG---QRDSYQSSAAGVTTDNDPNNTTVFV 265
Query: 280 GGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
GGLD SVTDD LK VF QYGE+VHVKIPAGKRCGFVQF+ +
Sbjct: 266 GGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEK 306
>gi|15221071|ref|NP_172630.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75336898|sp|Q9SAB3.1|RB45B_ARATH RecName: Full=Polyadenylate-binding protein RBP45B;
Short=Poly(A)-binding protein RBP45B; AltName:
Full=RNA-binding protein 45B; Short=AtRBP45B
gi|4835793|gb|AAD30259.1|AC007296_20 Similar to gb|U90212 DNA binding protein ACBF from Nicotiana
tabacum and contains 3 PF|00076 RNA recognition motif
domains. ESTs gb|T44278, gb|R65195, gb|N65904,
gb|H37499, gb|R90487, gb|N95952, gb|T44278, gb|Z20166,
gb|N96891, gb|W43137, gb|F15504, gb|F15495 and gb|Z30868
come from this gene [Arabidopsis thaliana]
gi|20260604|gb|AAM13200.1| similar to gb|U90212 DNA binding protein ACBF from Nicotiana
tabacum and contains 3 PF|00076 RNA recognition motif
domains [Arabidopsis thaliana]
gi|30725662|gb|AAP37853.1| At1g11650 [Arabidopsis thaliana]
gi|332190643|gb|AEE28764.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 405
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/281 (67%), Positives = 219/281 (77%), Gaps = 14/281 (4%)
Query: 42 PPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFV 101
PPP W PQ PPS Q ++D IR+LWIGDLQ WM+E+++ F HTGE V
Sbjct: 38 PPPQMWNPQAAAPPSVQP--------TTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMV 89
Query: 102 SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPS-TEQNFRLNWATYGAGERR 160
S KVIRNKQT EGYGFIEF SHAAAERVLQTFN +PS +Q FRLNWA+ +G++R
Sbjct: 90 SAKVIRNKQTGQVEGYGFIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKR 149
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
DD PD+TIFVGDLAADVTDY+L ETFRA Y SVKGAKVV DR TGR+KGYGFVRF DES
Sbjct: 150 -DDSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDES 208
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNT-QGSQGENDPNNTTIFV 279
EQ+R+MTEMNGV CSTRPMRIGPAA+KK TG Q+ +YQ++ G +NDPNNTT+FV
Sbjct: 209 EQIRAMTEMNGVPCSTRPMRIGPAASKKGVTG---QRDSYQSSAAGVTTDNDPNNTTVFV 265
Query: 280 GGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
GGLD SVTDD LK VF QYGE+VHVKIPAGKRCGFVQF+ +
Sbjct: 266 GGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEK 306
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 24/182 (13%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++++GDL + + + F + V G KV+ ++ T ++GYGF+ F + R +
Sbjct: 156 TIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMT 215
Query: 134 TFNGTQMPSTEQNFRL--------------NWATYGAGERRQDDGPDFTIFVGDLAADVT 179
NG +P + + R+ ++ + AG +D + T+FVG L A VT
Sbjct: 216 EMNG--VPCSTRPMRIGPAASKKGVTGQRDSYQSSAAGVTTDNDPNNTTVFVGGLDASVT 273
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
D L+ F + Y + K+ K GFV+F ++S ++ +NGV +
Sbjct: 274 DDHLKNVF-SQYGEIVHVKIPA------GKRCGFVQFSEKSCAEEALRMLNGVQLGGTTV 326
Query: 240 RI 241
R+
Sbjct: 327 RL 328
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 56 SQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSE 115
S Q+ GV D + ++++G L + + ++ ++F GE V K+ K+
Sbjct: 244 SYQSSAAGVTTDNDPNNT-TVFVGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRC---- 298
Query: 116 GYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNW 151
GF++F + AE L+ NG Q+ T RL+W
Sbjct: 299 --GFVQFSEKSCAEEALRMLNGVQLGGT--TVRLSW 330
>gi|75334880|sp|Q9LEB4.1|RBP45_NICPL RecName: Full=Polyadenylate-binding protein RBP45;
Short=Poly(A)-binding protein RBP45; AltName:
Full=RNA-binding protein 45; Short=NplRBP45
gi|9663767|emb|CAC01237.1| RNA Binding Protein 45 [Nicotiana plumbaginifolia]
Length = 409
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/328 (63%), Positives = 235/328 (71%), Gaps = 20/328 (6%)
Query: 4 QPPSQPSDQ---TSQYQQQHQQWMAYQQQSQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQ 60
QPP P Q Q QQ QQ Q W Q PSQQ
Sbjct: 9 QPPMAPMSMDQHQYQQQAPPPTQQQQWMMPPQQPQQPQFQPQSQPAWAQQ----PSQQQ- 63
Query: 61 PYGV--------APDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTN 112
YG +P + + +RSLWIGDLQ WM+E+Y+++ F HTGE VS KVIRNKQT
Sbjct: 64 -YGAMATTNPNPSPTGNPNEVRSLWIGDLQYWMDENYLSTCFYHTGELVSAKVIRNKQTG 122
Query: 113 FSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVG 172
SEGYGF+EF SHAAAE +LQT+NGT MP+ EQNFR+NWA+ GAGERR DD + TIFVG
Sbjct: 123 QSEGYGFLEFRSHAAAETILQTYNGTLMPNVEQNFRMNWASLGAGERR-DDSAEHTIFVG 181
Query: 173 DLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGV 232
DLAADVTDY+LQETF++VYSSV+GAKVVTDR TGRSKGYGFV+F DESEQLR+MTEMNGV
Sbjct: 182 DLAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQLRAMTEMNGV 241
Query: 233 LCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILK 292
LCSTRPMRIGPAA KK QKATYQN Q +QGE+DPNNTTIFVGGLDP+V ++ L+
Sbjct: 242 LCSTRPMRIGPAANKKPVGTP--QKATYQNPQATQGESDPNNTTIFVGGLDPTVAEEHLR 299
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQFANR 320
VF YGELVHVKI AGKRCGFVQF R
Sbjct: 300 QVFSPYGELVHVKIVAGKRCGFVQFGTR 327
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 8/77 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + E ++ +F GE V K++ K+ GF++F + A+AE+ L +
Sbjct: 283 TIFVGGLDPTVAEEHLRQVFSPYGELVHVKIVAGKRC------GFVQFGTRASAEQALSS 336
Query: 135 FNGTQMPSTEQNFRLNW 151
NGTQ+ Q+ RL+W
Sbjct: 337 LNGTQLGG--QSIRLSW 351
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 82/183 (44%), Gaps = 24/183 (13%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
++++GDL + + + F V G KV+ ++ T S+GYGF++F + R +
Sbjct: 176 HTIFVGDLAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQLRAM 235
Query: 133 QTFNGTQMPSTEQNFRLN------------WATYGAGERRQ--DDGPDFTIFVGDLAADV 178
NG + + + R+ ATY + Q D + TIFVG L V
Sbjct: 236 TEMNG--VLCSTRPMRIGPAANKKPVGTPQKATYQNPQATQGESDPNNTTIFVGGLDPTV 293
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
+ L++ F + Y + K+V K GFV+FG + ++++ +NG +
Sbjct: 294 AEEHLRQVF-SPYGELVHVKIVA------GKRCGFVQFGTRASAEQALSSLNGTQLGGQS 346
Query: 239 MRI 241
+R+
Sbjct: 347 IRL 349
>gi|9758270|dbj|BAB08769.1| unnamed protein product [Arabidopsis thaliana]
Length = 390
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/264 (70%), Positives = 216/264 (81%), Gaps = 9/264 (3%)
Query: 62 YGVA---PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYG 118
YG+ P ++SD ++SLWIGDLQ WM+E+YI S+F +GE S KVIRNK T SEGYG
Sbjct: 46 YGIGSQNPGSASD-VKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYG 104
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR-QDDGPDFTIFVGDLAAD 177
FIEFVSH+ AERVLQT+NG MPSTEQ FRLNWA GAGE+R Q +GPD TIFVGDLA +
Sbjct: 105 FIEFVSHSVAERVLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPE 164
Query: 178 VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTR 237
VTDY+L +TF+ VY SVKGAKVV DRTTGRSKGYGFVRF DE+EQ+R+MTEMNG CSTR
Sbjct: 165 VTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTR 224
Query: 238 PMRIGPAATKKAATGQQYQKATYQNTQGSQ-GENDPNNTTIFVGGLDPSVTDDILKTVFG 296
PMRIGPAA K A Q A YQNTQG+ G+NDPNNTTIFVGGLD +VTDD LK++FG
Sbjct: 225 PMRIGPAANKNALP---MQPAMYQNTQGANAGDNDPNNTTIFVGGLDANVTDDELKSIFG 281
Query: 297 QYGELVHVKIPAGKRCGFVQFANR 320
Q+GEL+HVKIP GKRCGFVQ+AN+
Sbjct: 282 QFGELLHVKIPPGKRCGFVQYANK 305
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L + + + SIFG GE + K+ K+ GF+++ + A+AE L
Sbjct: 261 TIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRC------GFVQYANKASAEHALSV 314
Query: 135 FNGTQMPSTEQNFRLNWA 152
NGTQ+ Q+ RL+W
Sbjct: 315 LNGTQLGG--QSIRLSWG 330
>gi|18423684|ref|NP_568815.1| RNA-binding protein 45A [Arabidopsis thaliana]
gi|75334165|sp|Q9FPJ8.1|RB45A_ARATH RecName: Full=Polyadenylate-binding protein RBP45A;
Short=Poly(A)-binding protein RBP45A; AltName:
Full=RNA-binding protein 45A; Short=AtRBP45A
gi|11762114|gb|AAG40335.1|AF324983_1 AT5g54900 [Arabidopsis thaliana]
gi|119360145|gb|ABL66801.1| At5g54900 [Arabidopsis thaliana]
gi|332009171|gb|AED96554.1| RNA-binding protein 45A [Arabidopsis thaliana]
Length = 387
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/264 (70%), Positives = 216/264 (81%), Gaps = 9/264 (3%)
Query: 62 YGVA---PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYG 118
YG+ P ++SD ++SLWIGDLQ WM+E+YI S+F +GE S KVIRNK T SEGYG
Sbjct: 46 YGIGSQNPGSASD-VKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYG 104
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR-QDDGPDFTIFVGDLAAD 177
FIEFVSH+ AERVLQT+NG MPSTEQ FRLNWA GAGE+R Q +GPD TIFVGDLA +
Sbjct: 105 FIEFVSHSVAERVLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPE 164
Query: 178 VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTR 237
VTDY+L +TF+ VY SVKGAKVV DRTTGRSKGYGFVRF DE+EQ+R+MTEMNG CSTR
Sbjct: 165 VTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTR 224
Query: 238 PMRIGPAATKKAATGQQYQKATYQNTQGSQ-GENDPNNTTIFVGGLDPSVTDDILKTVFG 296
PMRIGPAA K A Q A YQNTQG+ G+NDPNNTTIFVGGLD +VTDD LK++FG
Sbjct: 225 PMRIGPAANKNALP---MQPAMYQNTQGANAGDNDPNNTTIFVGGLDANVTDDELKSIFG 281
Query: 297 QYGELVHVKIPAGKRCGFVQFANR 320
Q+GEL+HVKIP GKRCGFVQ+AN+
Sbjct: 282 QFGELLHVKIPPGKRCGFVQYANK 305
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L + + + SIFG GE + K+ K+ GF+++ + A+AE L
Sbjct: 261 TIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRC------GFVQYANKASAEHALSV 314
Query: 135 FNGTQMPSTEQNFRLNWA 152
NGTQ+ Q+ RL+W
Sbjct: 315 LNGTQLGG--QSIRLSWG 330
>gi|297792959|ref|XP_002864364.1| hypothetical protein ARALYDRAFT_495572 [Arabidopsis lyrata subsp.
lyrata]
gi|297310199|gb|EFH40623.1| hypothetical protein ARALYDRAFT_495572 [Arabidopsis lyrata subsp.
lyrata]
Length = 398
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/263 (70%), Positives = 213/263 (80%), Gaps = 5/263 (1%)
Query: 60 QPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGF 119
Q YGV ++SLWIGDLQ WM+E+YI S+F +GE S KVIRNK T SEGYGF
Sbjct: 50 QQYGVGSQNPGSEVKSLWIGDLQQWMDENYIMSVFNQSGEAQSAKVIRNKLTGQSEGYGF 109
Query: 120 IEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR-QDDGPDFTIFVGDLAADV 178
IEF++H+ AERVLQT+NG QMPSTEQ FRLNWA GAGE+R Q +GPD TIFVGDLA +V
Sbjct: 110 IEFINHSVAERVLQTYNGAQMPSTEQTFRLNWAQAGAGEKRHQTEGPDHTIFVGDLAPEV 169
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
TDY+L +TF+ VY SVKGAKVV DRTTGRSKGYGFVRF DE+EQ+R+MTEMNG CSTRP
Sbjct: 170 TDYMLSDTFKNVYGSVKGAKVVVDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRP 229
Query: 239 MRIGPAATKKAATGQQYQKATYQNTQ-GSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
MRIGPAA K A Q A YQNTQ G+ G++DPNNTTIFVGGLD +VTDD LK++FGQ
Sbjct: 230 MRIGPAANKNALP---MQPAMYQNTQGGNAGDSDPNNTTIFVGGLDANVTDDELKSIFGQ 286
Query: 298 YGELVHVKIPAGKRCGFVQFANR 320
+GEL+HVKIP GKRCGFVQ+ANR
Sbjct: 287 FGELLHVKIPPGKRCGFVQYANR 309
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 9/112 (8%)
Query: 41 VPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEF 100
+ P P+ P Q G A D+ + ++++G L + + + SIFG GE
Sbjct: 232 IGPAANKNALPMQPAMYQNTQGGNAGDSDPNNT-TIFVGGLDANVTDDELKSIFGQFGEL 290
Query: 101 VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWA 152
+ K+ K+ GF+++ + A AE L NGTQ+ Q+ RL+W
Sbjct: 291 LHVKIPPGKRC------GFVQYANRATAEHALSVLNGTQLGG--QSIRLSWG 334
>gi|21592583|gb|AAM64532.1| putative DNA binding protein [Arabidopsis thaliana]
Length = 404
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/281 (67%), Positives = 218/281 (77%), Gaps = 14/281 (4%)
Query: 42 PPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFV 101
PPP W PQ PPS Q ++D IR+LWIGDLQ WM+E+++ F HTGE V
Sbjct: 37 PPPQMWNPQAAAPPSVQP--------TTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMV 88
Query: 102 SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPS-TEQNFRLNWATYGAGERR 160
S KVIRNKQT EGYGFIEF SHAAAERVLQTFN +PS +Q FRL WA+ +G++R
Sbjct: 89 SAKVIRNKQTGQVEGYGFIEFASHAAAERVLQTFNNAPIPSFPDQLFRLXWASLSSGDKR 148
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
DD PD+TIFVGDLAADVTDY+L ETFRA Y SVKGAKVV +R TGR+KGYGFVRF DES
Sbjct: 149 -DDSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVINRVTGRTKGYGFVRFSDES 207
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNT-QGSQGENDPNNTTIFV 279
EQ+R+MTEMNGV CSTRPMRIGPAA+KK TG Q+ +YQ++ G +NDPNNTT+FV
Sbjct: 208 EQIRAMTEMNGVPCSTRPMRIGPAASKKGVTG---QRDSYQSSAAGVTTDNDPNNTTVFV 264
Query: 280 GGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
GGLD SVTDD LK VF QYGE+VHVKIPAGKRCGFVQF+ +
Sbjct: 265 GGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEK 305
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 24/182 (13%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++++GDL + + + F + V G KV+ N+ T ++GYGF+ F + R +
Sbjct: 155 TIFVGDLAADVTDYILLETFRASYPSVKGAKVVINRVTGRTKGYGFVRFSDESEQIRAMT 214
Query: 134 TFNGTQMPSTEQNFRL--------------NWATYGAGERRQDDGPDFTIFVGDLAADVT 179
NG +P + + R+ ++ + AG +D + T+FVG L A VT
Sbjct: 215 EMNG--VPCSTRPMRIGPAASKKGVTGQRDSYQSSAAGVTTDNDPNNTTVFVGGLDASVT 272
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
D L+ F + Y + K+ K GFV+F ++S ++ +NGV +
Sbjct: 273 DDHLKNVF-SQYGEIVHVKIPA------GKRCGFVQFSEKSCAEEALRMLNGVQLGGTTV 325
Query: 240 RI 241
R+
Sbjct: 326 RL 327
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 56 SQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSE 115
S Q+ GV D + ++++G L + + ++ ++F GE V K+ K+
Sbjct: 243 SYQSSAAGVTTDNDPNNT-TVFVGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRC---- 297
Query: 116 GYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNW 151
GF++F + AE L+ NG Q+ T RL+W
Sbjct: 298 --GFVQFSEKSCAEEALRMLNGVQLGGT--TVRLSW 329
>gi|218193173|gb|EEC75600.1| hypothetical protein OsI_12307 [Oryza sativa Indica Group]
Length = 406
Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 173/250 (69%), Positives = 204/250 (81%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +R+LWIGDLQ WMEE+Y+ + F GE +S K+IRNKQT EGYGFIEF SHA AE+
Sbjct: 64 DEVRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQ 123
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
VLQ +NG MP+ Q F+LNWAT GAGE+R DDG D+TIFVGDLA+DVTD +LQ+TF+A
Sbjct: 124 VLQGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAH 183
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVKGAKVV DR+TGRSKGYGFV+FGD EQ R+MTEMNG CS+RPMRIGPA+ KK
Sbjct: 184 YQSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKNI 243
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
GQQ ATYQNTQG+ ++DPNNTT+FVGGLDPSVTD++LK F YGELV+VKIP GK
Sbjct: 244 GGQQQPSATYQNTQGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGK 303
Query: 311 RCGFVQFANR 320
RCGFVQ++NR
Sbjct: 304 RCGFVQYSNR 313
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + + + F GE V K+ K+ GF+++ + A+AE ++
Sbjct: 269 TVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRC------GFVQYSNRASAEEAIRM 322
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDD 163
NG+Q+ Q+ RL+W ++ Q D
Sbjct: 323 LNGSQLGG--QSIRLSWGRSPGNKQPQQD 349
>gi|108709398|gb|ABF97193.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 406
Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 173/250 (69%), Positives = 204/250 (81%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +R+LWIGDLQ WMEE+Y+ + F GE +S K+IRNKQT EGYGFIEF SHA AE+
Sbjct: 64 DEVRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQ 123
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
VLQ +NG MP+ Q F+LNWAT GAGE+R DDG D+TIFVGDLA+DVTD +LQ+TF+A
Sbjct: 124 VLQGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAH 183
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVKGAKVV DR+TGRSKGYGFV+FGD EQ R+MTEMNG CS+RPMRIGPA+ KK
Sbjct: 184 YQSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKNI 243
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
GQQ ATYQNTQG+ ++DPNNTT+FVGGLDPSVTD++LK F YGELV+VKIP GK
Sbjct: 244 GGQQQPSATYQNTQGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGK 303
Query: 311 RCGFVQFANR 320
RCGFVQ++NR
Sbjct: 304 RCGFVQYSNR 313
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + + + F GE V K+ K+ GF+++ + A+AE ++
Sbjct: 269 TVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRC------GFVQYSNRASAEEAIRM 322
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDD 163
NG+Q+ Q+ RL+W ++ Q D
Sbjct: 323 LNGSQLGG--QSIRLSWGRSPGNKQPQQD 349
>gi|12583812|gb|AAG59664.1|AC084319_22 putative RNA binding protein [Oryza sativa Japonica Group]
gi|108709397|gb|ABF97192.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|215678704|dbj|BAG95141.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 402
Score = 367 bits (943), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 173/250 (69%), Positives = 204/250 (81%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +R+LWIGDLQ WMEE+Y+ + F GE +S K+IRNKQT EGYGFIEF SHA AE+
Sbjct: 64 DEVRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQ 123
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
VLQ +NG MP+ Q F+LNWAT GAGE+R DDG D+TIFVGDLA+DVTD +LQ+TF+A
Sbjct: 124 VLQGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAH 183
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVKGAKVV DR+TGRSKGYGFV+FGD EQ R+MTEMNG CS+RPMRIGPA+ KK
Sbjct: 184 YQSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKNI 243
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
GQQ ATYQNTQG+ ++DPNNTT+FVGGLDPSVTD++LK F YGELV+VKIP GK
Sbjct: 244 GGQQQPSATYQNTQGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGK 303
Query: 311 RCGFVQFANR 320
RCGFVQ++NR
Sbjct: 304 RCGFVQYSNR 313
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + + + F GE V K+ K+ GF+++ + A+AE ++
Sbjct: 269 TVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRC------GFVQYSNRASAEEAIRM 322
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDD 163
NG+Q+ Q+ RL+W ++ Q D
Sbjct: 323 LNGSQLGG--QSIRLSWGRSPGNKQPQQD 349
>gi|115453831|ref|NP_001050516.1| Os03g0569900 [Oryza sativa Japonica Group]
gi|113548987|dbj|BAF12430.1| Os03g0569900, partial [Oryza sativa Japonica Group]
Length = 446
Score = 367 bits (942), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 173/250 (69%), Positives = 204/250 (81%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +R+LWIGDLQ WMEE+Y+ + F GE +S K+IRNKQT EGYGFIEF SHA AE+
Sbjct: 108 DEVRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQ 167
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
VLQ +NG MP+ Q F+LNWAT GAGE+R DDG D+TIFVGDLA+DVTD +LQ+TF+A
Sbjct: 168 VLQGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAH 227
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVKGAKVV DR+TGRSKGYGFV+FGD EQ R+MTEMNG CS+RPMRIGPA+ KK
Sbjct: 228 YQSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKNI 287
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
GQQ ATYQNTQG+ ++DPNNTT+FVGGLDPSVTD++LK F YGELV+VKIP GK
Sbjct: 288 GGQQQPSATYQNTQGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGK 347
Query: 311 RCGFVQFANR 320
RCGFVQ++NR
Sbjct: 348 RCGFVQYSNR 357
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + + + F GE V K+ K+ GF+++ + A+AE ++
Sbjct: 313 TVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRC------GFVQYSNRASAEEAIRM 366
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDD 163
NG+Q+ Q+ RL+W ++ Q D
Sbjct: 367 LNGSQL--GGQSIRLSWGRSPGNKQPQQD 393
>gi|116789456|gb|ABK25253.1| unknown [Picea sitchensis]
Length = 487
Score = 365 bits (938), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 176/254 (69%), Positives = 208/254 (81%), Gaps = 2/254 (0%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S+D +R+LW+GDLQ WM+E+Y+ S FG+ E VS K+IRNKQT SEGYGF+EF SHA A
Sbjct: 74 SADEVRTLWVGDLQYWMDETYMQSCFGNNQEVVSVKIIRNKQTGQSEGYGFVEFASHAGA 133
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
ER LQ NG QMP+TEQ +RLNWAT+G GE+R + GPD+ IFVGDLA+DVTDY+LQETFR
Sbjct: 134 ERFLQNHNGAQMPNTEQFYRLNWATFGIGEKRPEMGPDYPIFVGDLASDVTDYLLQETFR 193
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ Y +VKGAKVV+DR TGRSKGYGFVRFGDE+EQ+R+MTEMNG+ CS+RPMR GPA TKK
Sbjct: 194 SRYQTVKGAKVVSDRVTGRSKGYGFVRFGDENEQVRAMTEMNGMFCSSRPMRTGPATTKK 253
Query: 249 AATGQQ-YQKATYQN-TQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
QQ Y KA Q +NDPNNTTIFVGGLDPSVTD++L+ +FGQ+GELVHVKI
Sbjct: 254 TTGFQQPYPKAAAAVPPQVVASDNDPNNTTIFVGGLDPSVTDEMLRQLFGQFGELVHVKI 313
Query: 307 PAGKRCGFVQFANR 320
P GKRCGFVQF NR
Sbjct: 314 PVGKRCGFVQFNNR 327
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 9/115 (7%)
Query: 50 QPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNK 109
QP P + P VA D + ++++G L P + + + +FG GE V K+ K
Sbjct: 259 QPYPKAAAAVPPQVVASDNDPNNT-TIFVGGLDPSVTDEMLRQLFGQFGELVHVKIPVGK 317
Query: 110 QTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDG 164
+ GF++F + A+AE LQ +GT + +Q RL+W A ++ Q G
Sbjct: 318 RC------GFVQFNNRASAEEALQMLHGTVL--GQQAIRLSWGRSPANKQVQTPG 364
>gi|148910710|gb|ABR18422.1| unknown [Picea sitchensis]
Length = 418
Score = 365 bits (936), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 174/255 (68%), Positives = 206/255 (80%), Gaps = 3/255 (1%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S+D +R+LW+GDLQ WM+E+Y+ S FG+ E VS K+IRNKQT SEGYGF+EF SHA A
Sbjct: 74 SADEVRTLWVGDLQYWMDETYMQSCFGNNQEVVSVKIIRNKQTGQSEGYGFVEFASHAGA 133
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
ER LQ NG QMP+TEQ +RLNWAT+G GE+R + GPD+ IFVGDLA+DVTDY+LQETFR
Sbjct: 134 ERFLQNHNGAQMPNTEQFYRLNWATFGIGEKRPEMGPDYPIFVGDLASDVTDYLLQETFR 193
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ Y +VKGAKVV+DR TGRSKGYGFVRFGDE+EQ+R+MTEMNG+ CS+RPMR GPA TKK
Sbjct: 194 SRYQTVKGAKVVSDRVTGRSKGYGFVRFGDENEQVRAMTEMNGMFCSSRPMRTGPATTKK 253
Query: 249 AATGQQ---YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
QQ A Q +NDPNNTTIFVGGLDPSVTD++L+ +FGQ+GELVHVK
Sbjct: 254 TTGFQQPYPKAAAAAVPPQVVASDNDPNNTTIFVGGLDPSVTDEMLRQLFGQFGELVHVK 313
Query: 306 IPAGKRCGFVQFANR 320
IP GKRCGFVQF NR
Sbjct: 314 IPVGKRCGFVQFNNR 328
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + + + +FG GE V K+ K+ GF++F + A+AE LQ
Sbjct: 284 TIFVGGLDPSVTDEMLRQLFGQFGELVHVKIPVGKRC------GFVQFNNRASAEEALQM 337
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDG 164
+GT + +Q RL+W A ++ Q G
Sbjct: 338 LHGTVL--GQQAIRLSWGRSPANKQVQTPG 365
>gi|326513006|dbj|BAK03410.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326525779|dbj|BAJ88936.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 436
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 176/251 (70%), Positives = 205/251 (81%), Gaps = 3/251 (1%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
SD +R+LWIGDLQ WM+E+YI S F +TGEF S K+IR+KQT +GYGF+EF SHAAAE
Sbjct: 87 SDEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAE 146
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
RVLQTFNG MP+ E +RLNWA+ AGE+R DD PD+TIFVGDLAADVTDY+LQETFR
Sbjct: 147 RVLQTFNGQMMPNVELAYRLNWAS--AGEKR-DDTPDYTIFVGDLAADVTDYMLQETFRV 203
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA 249
Y SVKGAKVVTD+ T RSKGYGFV+FGD +EQ R+MTEMNG+ CS+RPMRIGPAA +K
Sbjct: 204 HYPSVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAANRKT 263
Query: 250 ATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAG 309
Q+ NTQG+Q +NDPNNTTIFVGGLDP+VT+D LK VF YGE+VHVKIP G
Sbjct: 264 TGVQERVPIPNTNTQGAQSDNDPNNTTIFVGGLDPNVTEDALKQVFAPYGEVVHVKIPVG 323
Query: 310 KRCGFVQFANR 320
KRCGFVQ+ANR
Sbjct: 324 KRCGFVQYANR 334
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
Query: 52 VPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQT 111
VP P+ TQ G D + ++++G L P + E + +F GE V K+ K+
Sbjct: 270 VPIPNTNTQ--GAQSDNDPNNT-TIFVGGLDPNVTEDALKQVFAPYGEVVHVKIPVGKRC 326
Query: 112 NFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNW 151
GF+++ + +AE+ LQ GT + QN RL+W
Sbjct: 327 ------GFVQYANRPSAEQALQLLQGTLVGG--QNVRLSW 358
>gi|293337265|ref|NP_001168324.1| uncharacterized protein LOC100382091 [Zea mays]
gi|223947441|gb|ACN27804.1| unknown [Zea mays]
gi|223947469|gb|ACN27818.1| unknown [Zea mays]
gi|413933766|gb|AFW68317.1| hypothetical protein ZEAMMB73_975236, partial [Zea mays]
Length = 406
Score = 357 bits (917), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 166/250 (66%), Positives = 200/250 (80%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D R+LWIGDLQ WM+E+Y+ S F GE +S K+IRNKQT EGYGFIEF +HA AE+
Sbjct: 67 DEARTLWIGDLQYWMDENYLYSCFSQAGEVISVKIIRNKQTGQPEGYGFIEFSNHAVAEQ 126
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
VLQ +NG MP+ Q F+LNWAT GAGE+R DDG D+TIFVGDLA+DVTD++LQ+TF++
Sbjct: 127 VLQNYNGQMMPNVNQPFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDFILQDTFKSR 186
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVKGAKVV DRTTGRSKGYGFV+F D EQ R+MTEMNG CS+R MR+GPA+ KK
Sbjct: 187 YPSVKGAKVVFDRTTGRSKGYGFVKFADSDEQTRAMTEMNGQYCSSRAMRLGPASNKKNT 246
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
G Q A YQNTQG+ ++DPNNTT+FVGGLDPSVTD++LK F YGEL++VKIP GK
Sbjct: 247 GGPQPSSAIYQNTQGTDSDSDPNNTTVFVGGLDPSVTDELLKQTFSPYGELLYVKIPVGK 306
Query: 311 RCGFVQFANR 320
RCGFVQ++NR
Sbjct: 307 RCGFVQYSNR 316
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 49 PQPVPPPSQQTQPYGVAPDASSD-GIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIR 107
PQP Q TQ D+ SD ++++G L P + + + F GE + K+
Sbjct: 249 PQPSSAIYQNTQ----GTDSDSDPNNTTVFVGGLDPSVTDELLKQTFSPYGELLYVKIPV 304
Query: 108 NKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWA 152
K+ GF+++ + A+AE ++ NG+Q+ Q+ RL+W
Sbjct: 305 GKRC------GFVQYSNRASAEEAIRVLNGSQLGG--QSIRLSWG 341
>gi|222629596|gb|EEE61728.1| hypothetical protein OsJ_16246 [Oryza sativa Japonica Group]
Length = 607
Score = 356 bits (914), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 173/250 (69%), Positives = 204/250 (81%), Gaps = 7/250 (2%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +++LWIGDLQPWM+ESYI + F TGE S K+IR+KQ+ +GYGF+EF S AAA+R
Sbjct: 36 DEVKTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADR 95
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+LQT+NG MP+ E FRLNWA+ AGE+R DD PD+TIFVGDLAADVTDY+LQETFR
Sbjct: 96 ILQTYNGQMMPNVEMVFRLNWAS--AGEKR-DDTPDYTIFVGDLAADVTDYLLQETFRVH 152
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVKGAKVVTD+ T RSKGYGFV+FGD +EQ R+MTEMNG+LCS+RPMRIGPAA KK
Sbjct: 153 YPSVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAANKK-T 211
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
TG Q + N QG+Q ENDPNNTTIFVGGLDP+VT+D+LK VF YGE+VHVKIP GK
Sbjct: 212 TGVQER---VPNAQGAQSENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGK 268
Query: 311 RCGFVQFANR 320
RCGFVQ+ NR
Sbjct: 269 RCGFVQYVNR 278
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + E + +F GE V K+ K+ GF+++V+ +AE+ L
Sbjct: 234 TIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRC------GFVQYVNRPSAEQALAV 287
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDD 163
GT + QN RL+W + ++ Q D
Sbjct: 288 LQGTLIGG--QNVRLSWGRSLSNKQPQHD 314
>gi|326495314|dbj|BAJ85753.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 385
Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 184/299 (61%), Positives = 217/299 (72%), Gaps = 22/299 (7%)
Query: 37 HQTPVPPPVGWTPQPVPP---------PSQQTQPYGV------APDASSDGIRSLWIGDL 81
HQ PPP+ QP+PP P QT YG AP A + R+LWIGDL
Sbjct: 32 HQLYAPPPLQMWSQPLPPQQAAYGQAQPPPQTAYYGWPSVPTQAP-AGPNEARTLWIGDL 90
Query: 82 QPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMP 141
Q WM+E+Y+ + F TGE S K+IR+KQT +GYGFIEF S A AERVLQTFNG MP
Sbjct: 91 QYWMDENYVYNCFASTGEVQSVKLIRDKQTGQLQGYGFIEFTSRAGAERVLQTFNGAMMP 150
Query: 142 STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVT 201
+ E +RLNWAT G + DDG D+TIFVGDLAADVTDY+LQETFRA Y SVKGAKVVT
Sbjct: 151 NVEMTYRLNWATAG---EKHDDGADYTIFVGDLAADVTDYLLQETFRAQYPSVKGAKVVT 207
Query: 202 DRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQ 261
D+ T RSKGYGFV+FGD +EQ R+MTEMNG++CS+RPMRIGPAA K+ A G Q + T
Sbjct: 208 DKLTMRSKGYGFVKFGDPTEQTRAMTEMNGMICSSRPMRIGPAANKQKANGVQEKVPT-- 265
Query: 262 NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
QG Q +NDP+N+TIFVGGLDPS T+D+LK VF YGE+VHVKIP GKRCGFVQ+A+R
Sbjct: 266 -AQGIQTDNDPSNSTIFVGGLDPSATEDVLKQVFTPYGEVVHVKIPVGKRCGFVQYASR 323
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P E + +F GE V K+ K+ GF+++ S ++AE L
Sbjct: 279 TIFVGGLDPSATEDVLKQVFTPYGEVVHVKIPVGKRC------GFVQYASRSSAEEALLM 332
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQD 162
GT + QN RL+W + ++ QD
Sbjct: 333 LQGTMIEG--QNVRLSWGRSPSNKQVQD 358
>gi|326513618|dbj|BAJ87828.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 388
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 184/299 (61%), Positives = 217/299 (72%), Gaps = 22/299 (7%)
Query: 37 HQTPVPPPVGWTPQPVPP---------PSQQTQPYGV------APDASSDGIRSLWIGDL 81
HQ PPP+ QP+PP P QT YG AP A + R+LWIGDL
Sbjct: 32 HQLYAPPPLQMWSQPLPPQQAAYGQAQPPPQTAYYGWPSVPTQAP-AGPNEARTLWIGDL 90
Query: 82 QPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMP 141
Q WM+E+Y+ + F TGE S K+IR+KQT +GYGFIEF S A AERVLQTFNG MP
Sbjct: 91 QYWMDENYVYNCFASTGEVQSVKLIRDKQTGQLQGYGFIEFTSRAGAERVLQTFNGAMMP 150
Query: 142 STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVT 201
+ E +RLNWAT G + DDG D+TIFVGDLAADVTDY+LQETFRA Y SVKGAKVVT
Sbjct: 151 NVEMAYRLNWATAG---EKHDDGADYTIFVGDLAADVTDYLLQETFRAQYPSVKGAKVVT 207
Query: 202 DRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQ 261
D+ T RSKGYGFV+FGD +EQ R+MTEMNG++CS+RPMRIGPAA K+ A G Q + T
Sbjct: 208 DKLTMRSKGYGFVKFGDPTEQTRAMTEMNGMICSSRPMRIGPAANKQKANGVQEKVPT-- 265
Query: 262 NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
QG Q +NDP+N+TIFVGGLDPS T+D+LK VF YGE+VHVKIP GKRCGFVQ+A+R
Sbjct: 266 -AQGIQTDNDPSNSTIFVGGLDPSATEDVLKQVFTPYGEVVHVKIPVGKRCGFVQYASR 323
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P E + +F GE V K+ K+ GF+++ S ++AE L
Sbjct: 279 TIFVGGLDPSATEDVLKQVFTPYGEVVHVKIPVGKRC------GFVQYASRSSAEEALLM 332
Query: 135 FNGTQMPSTEQNFRLNW 151
GT + QN RL+W
Sbjct: 333 LQGTMIEG--QNVRLSW 347
>gi|40253807|dbj|BAD05744.1| putative RNA Binding Protein 45 [Oryza sativa Japonica Group]
gi|40253847|dbj|BAD05783.1| putative RNA Binding Protein 45 [Oryza sativa Japonica Group]
Length = 427
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 175/248 (70%), Positives = 205/248 (82%), Gaps = 7/248 (2%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ WM+E+YI++ F TGE S K+IR+KQT +GYGFIEF SHA AERVL
Sbjct: 94 VRTLWIGDLQYWMDENYISACFAPTGELQSVKLIRDKQTGQLQGYGFIEFTSHAGAERVL 153
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT+NG MP+ EQ +RLNWA+ AGE+R DD PD+TIFVGDLAADVTDY+LQETFR Y
Sbjct: 154 QTYNGAMMPNVEQTYRLNWAS--AGEKR-DDTPDYTIFVGDLAADVTDYILQETFRVHYP 210
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SVKGAKVVTD+ T RSKGYGFV+FGD SEQ R+MTEMNG++CS+RPMRIGPAA KK ATG
Sbjct: 211 SVKGAKVVTDKMTMRSKGYGFVKFGDPSEQARAMTEMNGMVCSSRPMRIGPAANKK-ATG 269
Query: 253 QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Q + + QG Q ++DP+NTTIFVGGLDPSVTDD+LK VF YG++VHVKIP GKRC
Sbjct: 270 VQEKVPS---AQGVQSDSDPSNTTIFVGGLDPSVTDDMLKQVFTPYGDVVHVKIPVGKRC 326
Query: 313 GFVQFANR 320
GFVQFANR
Sbjct: 327 GFVQFANR 334
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + + + +F G+ V K+ K+ GF++F + A+A+ L
Sbjct: 290 TIFVGGLDPSVTDDMLKQVFTPYGDVVHVKIPVGKRC------GFVQFANRASADEALVL 343
Query: 135 FNGTQMPSTEQNFRLNW 151
GT + QN RL+W
Sbjct: 344 LQGTLIGG--QNVRLSW 358
>gi|125549823|gb|EAY95645.1| hypothetical protein OsI_17510 [Oryza sativa Indica Group]
Length = 426
Score = 354 bits (908), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 171/250 (68%), Positives = 202/250 (80%), Gaps = 7/250 (2%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +++LWIGDLQPWM+ESYI + F TGE S K+IR+KQ+ +GYGF+EF S AAA+R
Sbjct: 88 DEVKTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADR 147
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+LQT+NG MP+ E FRLNWA+ AGE+R DD PD+TIFVGDLAADVTDY+LQETFR
Sbjct: 148 ILQTYNGQMMPNVEMVFRLNWAS--AGEKR-DDTPDYTIFVGDLAADVTDYLLQETFRVH 204
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVKGAKVVTD+ T RSKGYGFV+FGD +EQ R+MTEMNG+LCS+RPMRIGPAA KK
Sbjct: 205 YPSVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAANKKTT 264
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
Q+ N QG+Q ENDPNNTTIFVGGLDP+VT+D+LK VF YGE+VHVKIP GK
Sbjct: 265 GVQE----RVPNAQGAQSENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGK 320
Query: 311 RCGFVQFANR 320
RCGFVQ+ NR
Sbjct: 321 RCGFVQYVNR 330
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + E + +F GE V K+ K+ GF+++V+ +AE+ L
Sbjct: 286 TIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRC------GFVQYVNRPSAEQALAV 339
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDD 163
GT + QN RL+W + ++ Q D
Sbjct: 340 LQGTLIGG--QNVRLSWGRSLSNKQPQHD 366
>gi|115460682|ref|NP_001053941.1| Os04g0625800 [Oryza sativa Japonica Group]
gi|113565512|dbj|BAF15855.1| Os04g0625800 [Oryza sativa Japonica Group]
gi|215767966|dbj|BAH00195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 425
Score = 354 bits (908), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 171/250 (68%), Positives = 202/250 (80%), Gaps = 7/250 (2%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +++LWIGDLQPWM+ESYI + F TGE S K+IR+KQ+ +GYGF+EF S AAA+R
Sbjct: 87 DEVKTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADR 146
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+LQT+NG MP+ E FRLNWA+ AGE+R DD PD+TIFVGDLAADVTDY+LQETFR
Sbjct: 147 ILQTYNGQMMPNVEMVFRLNWAS--AGEKR-DDTPDYTIFVGDLAADVTDYLLQETFRVH 203
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVKGAKVVTD+ T RSKGYGFV+FGD +EQ R+MTEMNG+LCS+RPMRIGPAA KK
Sbjct: 204 YPSVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAANKKTT 263
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
Q+ N QG+Q ENDPNNTTIFVGGLDP+VT+D+LK VF YGE+VHVKIP GK
Sbjct: 264 GVQE----RVPNAQGAQSENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGK 319
Query: 311 RCGFVQFANR 320
RCGFVQ+ NR
Sbjct: 320 RCGFVQYVNR 329
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + E + +F GE V K+ K+ GF+++V+ +AE+ L
Sbjct: 285 TIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRC------GFVQYVNRPSAEQALAV 338
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDD 163
GT + QN RL+W + ++ Q D
Sbjct: 339 LQGTLIGG--QNVRLSWGRSLSNKQPQHD 365
>gi|39545835|emb|CAE04743.3| OSJNBb0060E08.6 [Oryza sativa Japonica Group]
gi|116309791|emb|CAH66831.1| OSIGBa0148A10.8 [Oryza sativa Indica Group]
Length = 414
Score = 354 bits (908), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 171/250 (68%), Positives = 202/250 (80%), Gaps = 7/250 (2%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +++LWIGDLQPWM+ESYI + F TGE S K+IR+KQ+ +GYGF+EF S AAA+R
Sbjct: 76 DEVKTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADR 135
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+LQT+NG MP+ E FRLNWA+ AGE+R DD PD+TIFVGDLAADVTDY+LQETFR
Sbjct: 136 ILQTYNGQMMPNVEMVFRLNWAS--AGEKR-DDTPDYTIFVGDLAADVTDYLLQETFRVH 192
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVKGAKVVTD+ T RSKGYGFV+FGD +EQ R+MTEMNG+LCS+RPMRIGPAA KK
Sbjct: 193 YPSVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAANKKTT 252
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
Q+ N QG+Q ENDPNNTTIFVGGLDP+VT+D+LK VF YGE+VHVKIP GK
Sbjct: 253 GVQE----RVPNAQGAQSENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGK 308
Query: 311 RCGFVQFANR 320
RCGFVQ+ NR
Sbjct: 309 RCGFVQYVNR 318
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + E + +F GE V K+ K+ GF+++V+ +AE+ L
Sbjct: 274 TIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRC------GFVQYVNRPSAEQALAV 327
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDD 163
GT + QN RL+W + ++ Q D
Sbjct: 328 LQGTLIGG--QNVRLSWGRSLSNKQPQHD 354
>gi|242033859|ref|XP_002464324.1| hypothetical protein SORBIDRAFT_01g016170 [Sorghum bicolor]
gi|241918178|gb|EER91322.1| hypothetical protein SORBIDRAFT_01g016170 [Sorghum bicolor]
Length = 409
Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 166/251 (66%), Positives = 200/251 (79%), Gaps = 1/251 (0%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D R+LWIGDLQ WM+E+Y+ S F GE +S K+IRNKQT EGYGFIEF +HA AE+
Sbjct: 69 DEARTLWIGDLQYWMDENYLYSCFSQAGEVISVKIIRNKQTGQPEGYGFIEFGNHALAEQ 128
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
VLQ +NG MP+ Q F+LNWAT GAGE+R DDG D+TIFVGDLA+DVTD++LQ+TF++
Sbjct: 129 VLQNYNGQMMPNVNQPFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDFILQDTFKSR 188
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVK AKVV DRTTGRSKGYGFV+F D EQ R+MTEMNG CS+RPMR+GPA+ KK
Sbjct: 189 YPSVKSAKVVFDRTTGRSKGYGFVKFADLDEQTRAMTEMNGQYCSSRPMRLGPASNKKNT 248
Query: 251 TGQ-QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAG 309
GQ Q YQNTQG+ ++DPNNTT+FVGGLDPSVTD++LK F YGEL++VKIP G
Sbjct: 249 GGQPQPSSTIYQNTQGTDSDSDPNNTTVFVGGLDPSVTDELLKQTFSPYGELLYVKIPVG 308
Query: 310 KRCGFVQFANR 320
KRCGFVQ++NR
Sbjct: 309 KRCGFVQYSNR 319
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 13/109 (11%)
Query: 45 VGWTPQPVPPPSQQTQPYGVAPDASSD-GIRSLWIGDLQPWMEESYIASIFGHTGEFVSG 103
G PQP Q TQ D+ SD ++++G L P + + + F GE +
Sbjct: 248 TGGQPQPSSTIYQNTQ----GTDSDSDPNNTTVFVGGLDPSVTDELLKQTFSPYGELLYV 303
Query: 104 KVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWA 152
K+ K+ GF+++ + A+AE ++ NG+Q+ Q+ RL+W
Sbjct: 304 KIPVGKRC------GFVQYSNRASAEEAIRMLNGSQLGG--QSIRLSWG 344
>gi|357166074|ref|XP_003580589.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Brachypodium distachyon]
Length = 426
Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 171/250 (68%), Positives = 202/250 (80%), Gaps = 5/250 (2%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +R+LWIGDLQ WM+E+YI F TGE S K+IR+KQT +GYGF+EF SHAAAER
Sbjct: 85 DEVRTLWIGDLQYWMDETYIHGCFASTGELQSVKLIRDKQTGQLQGYGFVEFTSHAAAER 144
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
VLQ +NG MP+ + +RLNWA+ AGE+R DD PD+TIFVGDLAADVTDY+LQETFR
Sbjct: 145 VLQGYNGHAMPNVDLAYRLNWAS--AGEKR-DDTPDYTIFVGDLAADVTDYILQETFRVH 201
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVKGAKVVTD+ T RSKGYGFV+FGD +EQ R+MTEMNG+ CS+RPMRIGPAA +K
Sbjct: 202 YPSVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAANRK-T 260
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
TG Q ++ NTQG+Q +NDPNNTTIFVGGLDP+VT+D LK VF YGE++HVKIP GK
Sbjct: 261 TGVQ-ERVPNTNTQGAQSDNDPNNTTIFVGGLDPNVTEDALKQVFAPYGEVIHVKIPVGK 319
Query: 311 RCGFVQFANR 320
RCGFVQF NR
Sbjct: 320 RCGFVQFVNR 329
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + E + +F GE + K+ K+ GF++FV+ +AE+ LQ
Sbjct: 285 TIFVGGLDPNVTEDALKQVFAPYGEVIHVKIPVGKRC------GFVQFVNRPSAEQALQM 338
Query: 135 FNGTQMPSTEQNFRLNW 151
GT P QN RL+W
Sbjct: 339 LQGT--PIGGQNVRLSW 353
>gi|413921124|gb|AFW61056.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 453
Score = 351 bits (900), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 190/332 (57%), Positives = 225/332 (67%), Gaps = 30/332 (9%)
Query: 9 PSDQTSQYQQQHQQWMAYQQQSQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAP-- 66
P Q+Q Q W Q + PPP Q +PPP YG AP
Sbjct: 29 PPPMAPQHQYAPQMWGQAPPPPPPPQAAYGQAPPPPQAAYGQALPPPQAA---YGQAPPP 85
Query: 67 -DASSDG-----------------IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRN 108
A+ G +R+LWIGDLQ WM+++YI F TGE + K+IR+
Sbjct: 86 PQAAYYGAVPAPAAVAAAPVGPSEVRTLWIGDLQYWMDDNYIYGCFASTGEVQNVKLIRD 145
Query: 109 KQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT 168
K T +GYGFIEF+S AAAERVLQT+NGT MP+ E FRLNWA+ AGE+R DD PD+T
Sbjct: 146 KHTGQLQGYGFIEFISRAAAERVLQTYNGTMMPNVELPFRLNWAS--AGEKR-DDTPDYT 202
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE 228
IFVGDLAADVTDYVLQETFRA Y SVKGAKVVTD+ T R+KGYGFV+FGD +EQ R+MTE
Sbjct: 203 IFVGDLAADVTDYVLQETFRAHYPSVKGAKVVTDKLTMRTKGYGFVKFGDPNEQARAMTE 262
Query: 229 MNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTD 288
MNG+LCS+RPMRIGPAA KKA Q+ + QG Q +NDPNNTTIFVGGLDP+VT+
Sbjct: 263 MNGMLCSSRPMRIGPAANKKATVVQE----KVPSAQGVQSDNDPNNTTIFVGGLDPNVTE 318
Query: 289 DILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
D+LK VF YG++VHVKIP GKRCGFVQ+ANR
Sbjct: 319 DMLKQVFTPYGDVVHVKIPVGKRCGFVQYANR 350
>gi|357144721|ref|XP_003573391.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Brachypodium distachyon]
Length = 435
Score = 351 bits (900), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 174/285 (61%), Positives = 212/285 (74%), Gaps = 24/285 (8%)
Query: 54 PPSQQTQPYGVAP------------------DASSDGIRSLWIGDLQPWMEESYIASIFG 95
PP QQ PYG AP A + +R+LWIGDLQ WM+E+Y+ F
Sbjct: 60 PPPQQAAPYGQAPPPPQHAAYYGAPAAPAQAPAGPNEVRTLWIGDLQYWMDENYVYGCFA 119
Query: 96 HTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG 155
HTGE S K+IR+KQT +GYGF+EF + A AERVLQT+NG MP+ E +RLNWA+
Sbjct: 120 HTGEVQSVKLIRDKQTGQLQGYGFVEFTTRAGAERVLQTYNGATMPNVEMPYRLNWAS-- 177
Query: 156 AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVR 215
AGE+R DDGPD+TIFVGDLAADVTDY+LQETFR Y SVKGAKVVTD+ T RSKGYGFV+
Sbjct: 178 AGEKR-DDGPDYTIFVGDLAADVTDYILQETFRVHYPSVKGAKVVTDKLTMRSKGYGFVK 236
Query: 216 FGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNT 275
F D +EQ R+MTEMNG++CS+RPMRIGPAA K+ +G Q + + QG Q ++DP+NT
Sbjct: 237 FSDPTEQTRAMTEMNGMVCSSRPMRIGPAANKQKVSGAQEKVPS---AQGVQSDSDPSNT 293
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
TIFVGGLDP+VT+D+LK VF YGE+VHVKIP GKRCGFVQ+A+R
Sbjct: 294 TIFVGGLDPNVTEDMLKQVFAPYGEVVHVKIPVGKRCGFVQYASR 338
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + E + +F GE V K+ K+ GF+++ S +++E L
Sbjct: 294 TIFVGGLDPNVTEDMLKQVFAPYGEVVHVKIPVGKRC------GFVQYASRSSSEEALLM 347
Query: 135 FNGTQMPSTEQNFRLNW 151
GT + QN RL+W
Sbjct: 348 LQGTVI--GGQNVRLSW 362
>gi|194702946|gb|ACF85557.1| unknown [Zea mays]
gi|413921126|gb|AFW61058.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 456
Score = 351 bits (900), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 171/248 (68%), Positives = 202/248 (81%), Gaps = 7/248 (2%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ WM+++YI F TGE + K+IR+K T +GYGFIEF+S AAAERVL
Sbjct: 120 VRTLWIGDLQYWMDDNYIYGCFASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAAERVL 179
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT+NGT MP+ E FRLNWA+ AGE+R DD PD+TIFVGDLAADVTDYVLQETFRA Y
Sbjct: 180 QTYNGTMMPNVELPFRLNWAS--AGEKR-DDTPDYTIFVGDLAADVTDYVLQETFRAHYP 236
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SVKGAKVVTD+ T R+KGYGFV+FGD +EQ R+MTEMNG+LCS+RPMRIGPAA KKA
Sbjct: 237 SVKGAKVVTDKLTMRTKGYGFVKFGDPNEQARAMTEMNGMLCSSRPMRIGPAANKKATVV 296
Query: 253 QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Q+ + QG Q +NDPNNTTIFVGGLDP+VT+D+LK VF YG++VHVKIP GKRC
Sbjct: 297 QE----KVPSAQGVQSDNDPNNTTIFVGGLDPNVTEDMLKQVFTPYGDVVHVKIPVGKRC 352
Query: 313 GFVQFANR 320
GFVQ+ANR
Sbjct: 353 GFVQYANR 360
>gi|226504372|ref|NP_001141359.1| uncharacterized protein LOC100273450 [Zea mays]
gi|194704160|gb|ACF86164.1| unknown [Zea mays]
gi|413921127|gb|AFW61059.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 453
Score = 350 bits (899), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 171/248 (68%), Positives = 202/248 (81%), Gaps = 7/248 (2%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ WM+++YI F TGE + K+IR+K T +GYGFIEF+S AAAERVL
Sbjct: 120 VRTLWIGDLQYWMDDNYIYGCFASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAAERVL 179
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT+NGT MP+ E FRLNWA+ AGE+R DD PD+TIFVGDLAADVTDYVLQETFRA Y
Sbjct: 180 QTYNGTMMPNVELPFRLNWAS--AGEKR-DDTPDYTIFVGDLAADVTDYVLQETFRAHYP 236
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SVKGAKVVTD+ T R+KGYGFV+FGD +EQ R+MTEMNG+LCS+RPMRIGPAA KKA
Sbjct: 237 SVKGAKVVTDKLTMRTKGYGFVKFGDPNEQARAMTEMNGMLCSSRPMRIGPAANKKATVV 296
Query: 253 QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Q+ + QG Q +NDPNNTTIFVGGLDP+VT+D+LK VF YG++VHVKIP GKRC
Sbjct: 297 QE----KVPSAQGVQSDNDPNNTTIFVGGLDPNVTEDMLKQVFTPYGDVVHVKIPVGKRC 352
Query: 313 GFVQFANR 320
GFVQ+ANR
Sbjct: 353 GFVQYANR 360
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + E + +F G+ V K+ K+ GF+++ + ++AE L
Sbjct: 316 TIFVGGLDPNVTEDMLKQVFTPYGDVVHVKIPVGKRC------GFVQYANRSSAEEALVI 369
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQD 162
GT + QN RL+W + ++ QD
Sbjct: 370 LQGTLV--GGQNVRLSWGRSPSNKQVQD 395
>gi|168064363|ref|XP_001784132.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664332|gb|EDQ51056.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 453
Score = 347 bits (890), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 167/261 (63%), Positives = 202/261 (77%), Gaps = 13/261 (4%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+++LW+GDLQ WM+E+Y+ + F HTGE S K+IRNKQT +SEGYGF+EFVSH AAE++L
Sbjct: 42 VKTLWVGDLQYWMDENYLHTAFVHTGEVQSVKIIRNKQTGYSEGYGFVEFVSHVAAEKIL 101
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
Q +NGTQMP+TEQ FRLNWA++G GERR + GP+ +IFVGDLA DVTDY+LQETFR Y
Sbjct: 102 QAYNGTQMPNTEQPFRLNWASFGIGERRPEAGPEHSIFVGDLAPDVTDYMLQETFRTRYP 161
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SVKGAKVVTD TGRSKGYGFVRFGDE E+ R+M+EMNG+ CS+RPMRI A KK+
Sbjct: 162 SVKGAKVVTDANTGRSKGYGFVRFGDEMERNRAMSEMNGIYCSSRPMRISAATPKKSLGP 221
Query: 253 QQYQK-------ATYQ------NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
Q ATY + Q +NDPNNTTIFVGGLDP+V D+ L+ VFGQ+G
Sbjct: 222 NQLNPKVSPVAVATYAAYGAQPSPQAFPTDNDPNNTTIFVGGLDPAVGDEDLRNVFGQFG 281
Query: 300 ELVHVKIPAGKRCGFVQFANR 320
ELV+VKIPAGK CGFVQF +R
Sbjct: 282 ELVYVKIPAGKGCGFVQFTHR 302
>gi|168049769|ref|XP_001777334.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168061528|ref|XP_001782740.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665773|gb|EDQ52446.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671310|gb|EDQ57864.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 416
Score = 347 bits (890), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 170/268 (63%), Positives = 205/268 (76%), Gaps = 16/268 (5%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S + +++LW+GDLQ WM+E+Y+ + F HTGE S K+IRNKQT +SEGYGF+EFVSHAAA
Sbjct: 3 SHEEVKTLWVGDLQYWMDENYLHTAFVHTGEVQSVKIIRNKQTGYSEGYGFVEFVSHAAA 62
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
E++LQ +NGTQMP+TEQ FRLNWA++G GERR + GP+ +IFVGDLA DVTDY+LQETFR
Sbjct: 63 EKILQAYNGTQMPNTEQPFRLNWASFGIGERRPEAGPEHSIFVGDLAPDVTDYMLQETFR 122
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
Y SVKGAKVVTD TGRSKGYGFVRFGDE E+ R+M+EMNGV CS+RPMRI A KK
Sbjct: 123 TRYPSVKGAKVVTDANTGRSKGYGFVRFGDEMERNRAMSEMNGVYCSSRPMRISAATPKK 182
Query: 249 AATGQQYQK----------ATYQ------NTQGSQGENDPNNTTIFVGGLDPSVTDDILK 292
+ Q ATY + Q +NDPNNTTIFVGGLDP+V D+ L+
Sbjct: 183 SLGPAQLNPKVDAVSPVAVATYAAYGAQPSPQAFPVDNDPNNTTIFVGGLDPAVGDEDLR 242
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQFANR 320
VFGQ+GELV+VKIPAGK CGFVQF +R
Sbjct: 243 NVFGQFGELVYVKIPAGKGCGFVQFTHR 270
>gi|224284226|gb|ACN39849.1| unknown [Picea sitchensis]
Length = 429
Score = 346 bits (888), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 172/273 (63%), Positives = 207/273 (75%), Gaps = 11/273 (4%)
Query: 52 VPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQT 111
+P QQ QP SSD +++LW+GDLQ WM+E Y+ + F HTGE VS K+IRNK T
Sbjct: 76 LPMVMQQHQP------QSSDEVKTLWVGDLQFWMDEGYLHTCFSHTGELVSAKIIRNKYT 129
Query: 112 NFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFV 171
SEGYGF+EF++ AAE+++QT+NGT MP+TEQ FR+NWAT+ GERR D GPDF+IFV
Sbjct: 130 GQSEGYGFMEFITRTAAEKIMQTYNGTLMPNTEQVFRMNWATFSMGERRLDGGPDFSIFV 189
Query: 172 GDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
GDL +DV+D VLQETF++ YSSVK AKVV D TGRSKGYGFVRFG+ESE+ R+MTEMNG
Sbjct: 190 GDLDSDVSDLVLQETFQSRYSSVKAAKVVMDANTGRSKGYGFVRFGEESERARAMTEMNG 249
Query: 232 VLCSTRPMRIGPAATKKAATGQQYQKATYQN----TQGSQGENDPNNTTIFVGGLDPSVT 287
V CSTRPMRI AAT + + G Q+Q + N QG +ND NNTTIFVG LDP+ T
Sbjct: 250 VYCSTRPMRI-SAATPRKSAGVQHQYSGRGNGGSHAQGFPSDNDLNNTTIFVGRLDPNAT 308
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
D+ L+ VFGQYGELV VKIP GK CGFVQF NR
Sbjct: 309 DEDLRQVFGQYGELVSVKIPVGKGCGFVQFGNR 341
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 76/185 (41%), Gaps = 25/185 (13%)
Query: 75 SLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL + + + F + KV+ + T S+GYGF+ F + R +
Sbjct: 186 SIFVGDLDSDVSDLVLQETFQSRYSSVKAAKVVMDANTGRSKGYGFVRFGEESERARAMT 245
Query: 134 TFNGTQMPSTEQNF-----------------RLNWATYGAGERRQDDGPDFTIFVGDLAA 176
NG + R N ++ G +D + TIFVG L
Sbjct: 246 EMNGVYCSTRPMRISAATPRKSAGVQHQYSGRGNGGSHAQGFPSDNDLNNTTIFVGRLDP 305
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ TD L++ F Y + K+ KG GFV+FG+ + ++ ++G +
Sbjct: 306 NATDEDLRQVF-GQYGELVSVKIPV------GKGCGFVQFGNRASAEEALQRLHGTVIRQ 358
Query: 237 RPMRI 241
+ +R+
Sbjct: 359 QTVRL 363
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + + +FG GE VS K+ K G GF++F + A+AE LQ
Sbjct: 297 TIFVGRLDPNATDEDLRQVFGQYGELVSVKIPVGK------GCGFVQFGNRASAEEALQR 350
Query: 135 FNGTQMPSTEQNFRLNWA 152
+GT + +Q RL+W
Sbjct: 351 LHGTVI--RQQTVRLSWG 366
>gi|224286528|gb|ACN40970.1| unknown [Picea sitchensis]
Length = 430
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 171/274 (62%), Positives = 206/274 (75%), Gaps = 12/274 (4%)
Query: 52 VPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQT 111
+P QQ QP SSD +++LW+GDLQ WM+E Y+ + F HTGE VS K+IRNK T
Sbjct: 76 LPMVMQQHQP------QSSDEVKTLWVGDLQFWMDEGYLHTCFSHTGELVSAKIIRNKYT 129
Query: 112 NFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFV 171
SEGYGF+EF++ AAE+++QT+NGT MP+TEQ FR+NWAT+ GERR D GPDF+IFV
Sbjct: 130 GQSEGYGFMEFITRTAAEKIMQTYNGTLMPNTEQVFRMNWATFSMGERRLDGGPDFSIFV 189
Query: 172 GDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
GDL +DV+D VLQETF++ YSSVK AKVV D TGRSKGYGFVRFG+ESE+ R+MTEMNG
Sbjct: 190 GDLDSDVSDLVLQETFQSRYSSVKAAKVVMDANTGRSKGYGFVRFGEESERARAMTEMNG 249
Query: 232 VLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQG-----ENDPNNTTIFVGGLDPSV 286
V CSTRPMRI AAT + + G Q+Q + GS +ND NNTTIFVG LDP+
Sbjct: 250 VYCSTRPMRI-SAATPRKSAGVQHQYSGRAGNGGSHAQGFPSDNDLNNTTIFVGRLDPNA 308
Query: 287 TDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
TD+ L+ VFGQYGELV VKIP GK CGFVQF NR
Sbjct: 309 TDEDLRQVFGQYGELVSVKIPVGKGCGFVQFGNR 342
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 75/186 (40%), Gaps = 26/186 (13%)
Query: 75 SLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL + + + F + KV+ + T S+GYGF+ F + R +
Sbjct: 186 SIFVGDLDSDVSDLVLQETFQSRYSSVKAAKVVMDANTGRSKGYGFVRFGEESERARAMT 245
Query: 134 TFNGTQMPSTEQNFRL------------------NWATYGAGERRQDDGPDFTIFVGDLA 175
NG + N ++ G +D + TIFVG L
Sbjct: 246 EMNGVYCSTRPMRISAATPRKSAGVQHQYSGRAGNGGSHAQGFPSDNDLNNTTIFVGRLD 305
Query: 176 ADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCS 235
+ TD L++ F Y + K+ KG GFV+FG+ + ++ ++G +
Sbjct: 306 PNATDEDLRQVF-GQYGELVSVKIPV------GKGCGFVQFGNRASAEEALQRLHGTVIR 358
Query: 236 TRPMRI 241
+ +R+
Sbjct: 359 QQTVRL 364
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + + +FG GE VS K+ K G GF++F + A+AE LQ
Sbjct: 298 TIFVGRLDPNATDEDLRQVFGQYGELVSVKIPVGK------GCGFVQFGNRASAEEALQR 351
Query: 135 FNGTQMPSTEQNFRLNWA 152
+GT + +Q RL+W
Sbjct: 352 LHGTVI--RQQTVRLSWG 367
>gi|255544854|ref|XP_002513488.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223547396|gb|EEF48891.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 412
Score = 343 bits (881), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 172/271 (63%), Positives = 207/271 (76%), Gaps = 9/271 (3%)
Query: 59 TQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYG 118
T P G A+ + +R+LWIGDLQ W++E+Y++S F HTGE +S K+IRNK T EGYG
Sbjct: 7 TNPGGYHQPATLEEVRTLWIGDLQYWVDENYLSSCFAHTGEVLSIKIIRNKITGQPEGYG 66
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADV 178
F+EFVSH AAER+LQT+NGTQMP TEQ FRLNWA++G GERR D GP+ +IFVGDL+ DV
Sbjct: 67 FVEFVSHVAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLSPDV 126
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
TDY+LQETFRA Y SV+GAKVVTD TGRSKGYGFV+FGDE+E+ R+MTEMNGV CSTRP
Sbjct: 127 TDYLLQETFRANYPSVRGAKVVTDPNTGRSKGYGFVKFGDENERNRAMTEMNGVFCSTRP 186
Query: 239 MRIGPAATKK-AATGQQY--QKATY------QNTQGSQGENDPNNTTIFVGGLDPSVTDD 289
MRI A KK AA QQY KA Y Q +ND NTTIFVG LDP+VT++
Sbjct: 187 MRISAATPKKTAAYQQQYATAKAIYPLPAYTAPVQVVPADNDITNTTIFVGNLDPNVTEE 246
Query: 290 ILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
L+ +F Q+GE+V+VKIP G+ CGFVQFA R
Sbjct: 247 ELRPIFLQFGEIVYVKIPVGRGCGFVQFATR 277
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 33/200 (16%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVS 124
PDA + S+++GDL P + + + F V G KV+ + T S+GYGF++F
Sbjct: 109 PDAGPE--HSIFVGDLSPDVTDYLLQETFRANYPSVRGAKVVTDPNTGRSKGYGFVKFGD 166
Query: 125 HAAAERVLQTFNGT-----------QMPSTEQNFRLNWAT---------YGAGER---RQ 161
R + NG P ++ +AT Y A +
Sbjct: 167 ENERNRAMTEMNGVFCSTRPMRISAATPKKTAAYQQQYATAKAIYPLPAYTAPVQVVPAD 226
Query: 162 DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
+D + TIFVG+L +VT+ L+ F G V GR G GFV+F +
Sbjct: 227 NDITNTTIFVGNLDPNVTEEELRPIFLQF-----GEIVYVKIPVGR--GCGFVQFATRAS 279
Query: 222 QLRSMTEMNGVLCSTRPMRI 241
++ M G + +P+RI
Sbjct: 280 AEEAIQRMQGHVIGQQPVRI 299
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query: 48 TPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIR 107
T + + P T P V P + ++++G+L P + E + IF GE V K+
Sbjct: 206 TAKAIYPLPAYTAPVQVVPADNDITNTTIFVGNLDPNVTEEELRPIFLQFGEIVYVKI-- 263
Query: 108 NKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNW 151
G GF++F + A+AE +Q G + +Q R++W
Sbjct: 264 ----PVGRGCGFVQFATRASAEEAIQRMQGHVI--GQQPVRISW 301
>gi|242074396|ref|XP_002447134.1| hypothetical protein SORBIDRAFT_06g029180 [Sorghum bicolor]
gi|241938317|gb|EES11462.1| hypothetical protein SORBIDRAFT_06g029180 [Sorghum bicolor]
Length = 440
Score = 343 bits (881), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 167/250 (66%), Positives = 199/250 (79%), Gaps = 5/250 (2%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +R+LWIGDLQ WM+ESY+ F TGE + K+IR+K + +GYGF+EF S AAAER
Sbjct: 89 DEVRTLWIGDLQYWMDESYVLGCFLSTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAER 148
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
VLQT+NG MP+ E FRLNWA+ AGE+R DD PD+TIFVGDLAADVTDY+LQETFR
Sbjct: 149 VLQTYNGQMMPNVELTFRLNWAS--AGEKR-DDTPDYTIFVGDLAADVTDYLLQETFRVH 205
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVKGAKVVTD+ T R+KGYGFV+FGD +EQ R+MTEMNG+ CS+RPMRIGPAA++K
Sbjct: 206 YPSVKGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAASRKNT 265
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
G ++ N+QG+Q ENDPNNTTIFVGGLDP+VT+D LK VF YGE+VHVKIP GK
Sbjct: 266 GGVVQERVP--NSQGAQSENDPNNTTIFVGGLDPNVTEDTLKQVFSPYGEVVHVKIPVGK 323
Query: 311 RCGFVQFANR 320
RCGFVQF R
Sbjct: 324 RCGFVQFVTR 333
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + E + +F GE V K+ K+ GF++FV+ +AE+ L
Sbjct: 289 TIFVGGLDPNVTEDTLKQVFSPYGEVVHVKIPVGKRC------GFVQFVTRPSAEQALLM 342
Query: 135 FNGTQMPSTEQNFRLNW 151
G + + QN RL+W
Sbjct: 343 LQGALIGA--QNVRLSW 357
>gi|359478387|ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Vitis vinifera]
Length = 438
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 170/264 (64%), Positives = 200/264 (75%), Gaps = 13/264 (4%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S + +R+LWIGDLQ W++E+Y+ S F HTGE +S K+IRNK T EGYGF+EFVSHAAA
Sbjct: 36 SVEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAA 95
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
ER+LQ +NGTQMP TEQ FRLNWA++G GERR D GP+ +IFVGDLA DVTDY+LQETFR
Sbjct: 96 ERILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFR 155
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
A Y SV+GAKVVTD TGR+KGYGFV+F DE E+ R+MTEMNGV CSTRPMRI AAT K
Sbjct: 156 AQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTEMNGVYCSTRPMRIS-AATPK 214
Query: 249 AATGQQYQKA------------TYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFG 296
TG Q Q A T Q +ND NNTTIFVG LDP+VT++ LK +F
Sbjct: 215 KTTGFQQQYAAAAKALYPAPAYTTPPLQALPADNDINNTTIFVGNLDPNVTEEELKQIFS 274
Query: 297 QYGELVHVKIPAGKRCGFVQFANR 320
Q+GELV+VKIPAG+ CGFVQF R
Sbjct: 275 QFGELVYVKIPAGRGCGFVQFGTR 298
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 97/230 (42%), Gaps = 41/230 (17%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVS 124
PDA + S+++GDL P + + + F V G KV+ + T ++GYGF++F
Sbjct: 128 PDAGPE--HSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSD 185
Query: 125 HAAAERVLQTFNGTQMPSTEQNFRLNWAT--YGAGERRQ--------------------- 161
R + NG + + R++ AT G ++Q
Sbjct: 186 EMERNRAMTEMNGVY--CSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTTPPLQA 243
Query: 162 ----DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFG 217
+D + TIFVG+L +VT+ L++ F S G V GR G GFV+FG
Sbjct: 244 LPADNDINNTTIFVGNLDPNVTEEELKQIF-----SQFGELVYVKIPAGR--GCGFVQFG 296
Query: 218 DESEQLRSMTEMNGVLCSTRPMRI--GPAATKKAATGQQYQKATYQNTQG 265
+ ++ M G + +RI G + T K A Q+ A Y QG
Sbjct: 297 TRTSAEEAIQRMQGTVIGQLVVRISWGRSPTAKQADPSQWSSAYYGYGQG 346
>gi|225435468|ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 447
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 170/264 (64%), Positives = 200/264 (75%), Gaps = 13/264 (4%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S + +R+LWIGDLQ W++E+Y+ S F HTGE +S K+IRNK T EGYGF+EFVSHAAA
Sbjct: 36 SVEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAA 95
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
ER+LQ +NGTQMP TEQ FRLNWA++G GERR D GP+ +IFVGDLA DVTDY+LQETFR
Sbjct: 96 ERILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFR 155
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
A Y SV+GAKVVTD TGR+KGYGFV+F DE E+ R+MTEMNGV CSTRPMRI AAT K
Sbjct: 156 AQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTEMNGVYCSTRPMRIS-AATPK 214
Query: 249 AATGQQYQKA------------TYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFG 296
TG Q Q A T Q +ND NNTTIFVG LDP+VT++ LK +F
Sbjct: 215 KTTGFQQQYAAAAKALYPAPAYTTPPLQALPADNDINNTTIFVGNLDPNVTEEELKQIFS 274
Query: 297 QYGELVHVKIPAGKRCGFVQFANR 320
Q+GELV+VKIPAG+ CGFVQF R
Sbjct: 275 QFGELVYVKIPAGRGCGFVQFGTR 298
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 39/204 (19%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVS 124
PDA + S+++GDL P + + + F V G KV+ + T ++GYGF++F
Sbjct: 128 PDAGPE--HSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSD 185
Query: 125 HAAAERVLQTFNGTQMPSTEQNFRLNWAT--YGAGERRQ--------------------- 161
R + NG + + R++ AT G ++Q
Sbjct: 186 EMERNRAMTEMNGVY--CSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTTPPLQA 243
Query: 162 ----DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFG 217
+D + TIFVG+L +VT+ L++ F S G V GR G GFV+FG
Sbjct: 244 LPADNDINNTTIFVGNLDPNVTEEELKQIF-----SQFGELVYVKIPAGR--GCGFVQFG 296
Query: 218 DESEQLRSMTEMNGVLCSTRPMRI 241
+ ++ M G + +RI
Sbjct: 297 TRTSAEEAIQRMQGTVIGQLVVRI 320
>gi|297746331|emb|CBI16387.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 170/264 (64%), Positives = 200/264 (75%), Gaps = 13/264 (4%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S + +R+LWIGDLQ W++E+Y+ S F HTGE +S K+IRNK T EGYGF+EFVSHAAA
Sbjct: 36 SVEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAA 95
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
ER+LQ +NGTQMP TEQ FRLNWA++G GERR D GP+ +IFVGDLA DVTDY+LQETFR
Sbjct: 96 ERILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFR 155
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
A Y SV+GAKVVTD TGR+KGYGFV+F DE E+ R+MTEMNGV CSTRPMRI AAT K
Sbjct: 156 AQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTEMNGVYCSTRPMRIS-AATPK 214
Query: 249 AATGQQYQKA------------TYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFG 296
TG Q Q A T Q +ND NNTTIFVG LDP+VT++ LK +F
Sbjct: 215 KTTGFQQQYAAAAKALYPAPAYTTPPLQALPADNDINNTTIFVGNLDPNVTEEELKQIFS 274
Query: 297 QYGELVHVKIPAGKRCGFVQFANR 320
Q+GELV+VKIPAG+ CGFVQF R
Sbjct: 275 QFGELVYVKIPAGRGCGFVQFGTR 298
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 39/204 (19%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVS 124
PDA + S+++GDL P + + + F V G KV+ + T ++GYGF++F
Sbjct: 128 PDAGPE--HSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSD 185
Query: 125 HAAAERVLQTFNGTQMPSTEQNFRLNWAT--YGAGERRQ--------------------- 161
R + NG + + R++ AT G ++Q
Sbjct: 186 EMERNRAMTEMNGVY--CSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTTPPLQA 243
Query: 162 ----DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFG 217
+D + TIFVG+L +VT+ L++ F S G V GR G GFV+FG
Sbjct: 244 LPADNDINNTTIFVGNLDPNVTEEELKQIF-----SQFGELVYVKIPAGR--GCGFVQFG 296
Query: 218 DESEQLRSMTEMNGVLCSTRPMRI 241
+ ++ M G + +RI
Sbjct: 297 TRTSAEEAIQRMQGTVIGQLVVRI 320
>gi|212722596|ref|NP_001131852.1| uncharacterized protein LOC100193230 [Zea mays]
gi|194692726|gb|ACF80447.1| unknown [Zea mays]
gi|413919585|gb|AFW59517.1| hypothetical protein ZEAMMB73_768040 [Zea mays]
Length = 434
Score = 341 bits (874), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 163/250 (65%), Positives = 201/250 (80%), Gaps = 5/250 (2%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +R+LWIGDLQ WM+++Y+ F +TGE + K+IR+K + +GYGF+EF S AAAER
Sbjct: 83 DEVRTLWIGDLQYWMDDNYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAER 142
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
VLQT+NG MP+ + FRLNWA+ AGE+R DD PD+TIFVGDLAADVTDY+LQETFR
Sbjct: 143 VLQTYNGQMMPNVDLTFRLNWAS--AGEKR-DDTPDYTIFVGDLAADVTDYLLQETFRVH 199
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVKGAKVVTD+ T R+KGYGFV+FGD +EQ R+MTEMNG+ CS+RPMRIGPAA++K A
Sbjct: 200 YPSVKGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAASRKNA 259
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
G ++ N+QG+Q ENDPNNTTIFVGGLDP+VT+D+LK F YGE++HVKIP GK
Sbjct: 260 GGVVQERVP--NSQGAQSENDPNNTTIFVGGLDPNVTEDVLKQAFSPYGEVIHVKIPVGK 317
Query: 311 RCGFVQFANR 320
RCGFVQF R
Sbjct: 318 RCGFVQFVTR 327
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + E + F GE + K+ K+ GF++FV+ +AE+ L
Sbjct: 283 TIFVGGLDPNVTEDVLKQAFSPYGEVIHVKIPVGKRC------GFVQFVTRPSAEQALLM 336
Query: 135 FNGTQMPSTEQNFRLNWA 152
G + + QN RL+W
Sbjct: 337 LQGALIGA--QNVRLSWG 352
>gi|413919584|gb|AFW59516.1| hypothetical protein ZEAMMB73_768040, partial [Zea mays]
Length = 428
Score = 340 bits (873), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 163/250 (65%), Positives = 201/250 (80%), Gaps = 5/250 (2%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +R+LWIGDLQ WM+++Y+ F +TGE + K+IR+K + +GYGF+EF S AAAER
Sbjct: 83 DEVRTLWIGDLQYWMDDNYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAER 142
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
VLQT+NG MP+ + FRLNWA+ AGE+R DD PD+TIFVGDLAADVTDY+LQETFR
Sbjct: 143 VLQTYNGQMMPNVDLTFRLNWAS--AGEKR-DDTPDYTIFVGDLAADVTDYLLQETFRVH 199
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVKGAKVVTD+ T R+KGYGFV+FGD +EQ R+MTEMNG+ CS+RPMRIGPAA++K A
Sbjct: 200 YPSVKGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAASRKNA 259
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
G ++ N+QG+Q ENDPNNTTIFVGGLDP+VT+D+LK F YGE++HVKIP GK
Sbjct: 260 GGVVQERVP--NSQGAQSENDPNNTTIFVGGLDPNVTEDVLKQAFSPYGEVIHVKIPVGK 317
Query: 311 RCGFVQFANR 320
RCGFVQF R
Sbjct: 318 RCGFVQFVTR 327
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + E + F GE + K+ K+ GF++FV+ +AE+ L
Sbjct: 283 TIFVGGLDPNVTEDVLKQAFSPYGEVIHVKIPVGKRC------GFVQFVTRPSAEQALLM 336
Query: 135 FNGTQMPSTEQNFRLNWA 152
G + + QN RL+W
Sbjct: 337 LQGALIGA--QNVRLSWG 352
>gi|449470045|ref|XP_004152729.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
gi|449496017|ref|XP_004160013.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
Length = 429
Score = 340 bits (871), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 182/338 (53%), Positives = 227/338 (67%), Gaps = 24/338 (7%)
Query: 4 QPPSQPSDQTSQYQQQHQQ-----WMAYQQQSQQQQQQHQTPVPPPVGWTPQP------- 51
QP Q + QT Q QQ H+Q WMA Q + QH P+ PP + P P
Sbjct: 9 QPQQQAAHQTEQNQQTHKQPQPQRWMAMQYPAAAMIMQH--PMMPPQHYVPPPSPHYIPY 66
Query: 52 --VPPPSQ-QTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRN 108
PPP Q Q + S+ +++W+GDLQ WM+E+Y+ S F TGE S KVIRN
Sbjct: 67 RQYPPPHQLNGQQHQQPHQGSTSENKTIWVGDLQHWMDENYLHSCFASTGEISSLKVIRN 126
Query: 109 KQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT 168
KQT SEGYGF+EF SH AE+VLQ ++ MP+TEQ FRLNWAT+ G++R ++G D +
Sbjct: 127 KQTGISEGYGFVEFFSHTTAEKVLQNYSSILMPNTEQAFRLNWATFSTGDKRSENGSDLS 186
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE 228
IFVGDLAADVTD VL ETF + YSSVK AKVV D TG SKGYGFVRFGD++E+ ++MTE
Sbjct: 187 IFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQAMTE 246
Query: 229 MNGVLCSTRPMRIGPAATKKAATG--QQYQKATYQN----TQGSQGENDPNNTTIFVGGL 282
MNG+ CS+RPMRIG AAT K ++G QQY Y + + G Q + D NTTIF+GGL
Sbjct: 247 MNGIYCSSRPMRIG-AATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFTNTTIFIGGL 305
Query: 283 DPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DP+VTD+ LK +F Q+GE+V VKIP GK CGF+QFANR
Sbjct: 306 DPNVTDEDLKQLFSQHGEIVSVKIPVGKGCGFIQFANR 343
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 32/203 (15%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL + +S + F V + KV+ + T S+GYGF+ F + +
Sbjct: 186 SIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQAMT 245
Query: 134 TFNGTQMPS--------------------TEQNFRLNWATYGAGERRQDDGPDFTIFVGD 173
NG S + Q + N ++ G + D + TIF+G
Sbjct: 246 EMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASN-GSFSHGHQSDGDFTNTTIFIGG 304
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
L +VTD L++ F S G V G KG GF++F + ++ ++NG +
Sbjct: 305 LDPNVTDEDLKQLF-----SQHGEIVSVKIPVG--KGCGFIQFANRKNAEEALQKLNGTV 357
Query: 234 CSTRPMRIGPAATKKAATGQQYQ 256
+ +R+ + ++ T +QY+
Sbjct: 358 IGKQTVRL---SWGRSPTNKQYR 377
>gi|293336608|ref|NP_001168401.1| uncharacterized protein LOC100382170 [Zea mays]
gi|223948043|gb|ACN28105.1| unknown [Zea mays]
gi|414585352|tpg|DAA35923.1| TPA: hypothetical protein ZEAMMB73_028165 [Zea mays]
Length = 432
Score = 339 bits (870), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 164/250 (65%), Positives = 200/250 (80%), Gaps = 5/250 (2%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +R+LWIGDLQ WM+E+Y+ F +TGE + K+IR+K + +GYGF+EF S AAAER
Sbjct: 89 DEVRTLWIGDLQYWMDENYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAER 148
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
VLQT+NG MP+ + FRLNWA+ AGE+R DD P++TIFVGDLAADVTDY+LQETFR
Sbjct: 149 VLQTYNGQMMPNVDLTFRLNWAS--AGEKR-DDTPEYTIFVGDLAADVTDYLLQETFRVH 205
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVKGAKVVTD+ T R+KGYGFV+FGD +EQ R+MTEMNG+ CS+RPMRIGPAA++K
Sbjct: 206 YPSVKGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAASRKNT 265
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
G ++ N+QG+Q ENDPNNTTIFVGGLDP+VT+D LK VF YGE+VHVKIP GK
Sbjct: 266 GGVVQERVP--NSQGAQSENDPNNTTIFVGGLDPNVTEDTLKQVFSPYGEVVHVKIPVGK 323
Query: 311 RCGFVQFANR 320
RCGFVQF R
Sbjct: 324 RCGFVQFVTR 333
Score = 40.4 bits (93), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + E + +F GE V K+ K+ GF++FV+ +AE+ L
Sbjct: 289 TIFVGGLDPNVTEDTLKQVFSPYGEVVHVKIPVGKRC------GFVQFVTRPSAEQALLM 342
Query: 135 FNGTQMPSTEQNFRLNWA 152
G + + QN RL+W
Sbjct: 343 LQGALIGA--QNVRLSWG 358
>gi|413919586|gb|AFW59518.1| hypothetical protein ZEAMMB73_768040 [Zea mays]
Length = 329
Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 163/250 (65%), Positives = 201/250 (80%), Gaps = 5/250 (2%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +R+LWIGDLQ WM+++Y+ F +TGE + K+IR+K + +GYGF+EF S AAAER
Sbjct: 83 DEVRTLWIGDLQYWMDDNYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAER 142
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
VLQT+NG MP+ + FRLNWA+ AGE+R DD PD+TIFVGDLAADVTDY+LQETFR
Sbjct: 143 VLQTYNGQMMPNVDLTFRLNWAS--AGEKR-DDTPDYTIFVGDLAADVTDYLLQETFRVH 199
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVKGAKVVTD+ T R+KGYGFV+FGD +EQ R+MTEMNG+ CS+RPMRIGPAA++K A
Sbjct: 200 YPSVKGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAASRKNA 259
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
G ++ N+QG+Q ENDPNNTTIFVGGLDP+VT+D+LK F YGE++HVKIP GK
Sbjct: 260 GGVVQERVP--NSQGAQSENDPNNTTIFVGGLDPNVTEDVLKQAFSPYGEVIHVKIPVGK 317
Query: 311 RCGFVQFANR 320
RCGFVQF R
Sbjct: 318 RCGFVQFVTR 327
>gi|226506980|ref|NP_001152183.1| LOC100285821 [Zea mays]
gi|195653617|gb|ACG46276.1| RNA-binding post-transcriptional regulator csx1 [Zea mays]
Length = 415
Score = 337 bits (863), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 165/263 (62%), Positives = 199/263 (75%), Gaps = 12/263 (4%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S + +R+LWIGDLQ W +E+Y+ S F HTGE S K+IRNK T+ EGYGFIEFVSH AA
Sbjct: 10 SLEEVRTLWIGDLQYWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGFIEFVSHEAA 69
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
E++LQT+NGTQMP TE FRLNWA++ +GERR D G D +IFVGDLA DVTDY+LQETFR
Sbjct: 70 EKILQTYNGTQMPGTEHTFRLNWASFSSGERRPDPGSDHSIFVGDLAPDVTDYLLQETFR 129
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
YSSV+GAKVVTD TGRSKGYGFV+F DE+E+ R+MTEMNGV CSTRPMRI AA K
Sbjct: 130 VNYSSVRGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGVYCSTRPMRIS-AAIPK 188
Query: 249 AATGQQYQ----KATYQNT-------QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+TG Q Q KA Y T Q ++DP NTTIF+G LDP+V +D L+ + Q
Sbjct: 189 KSTGSQLQYSAAKAVYPATAYAMPQLQAVLPDSDPTNTTIFIGNLDPNVIEDELRQICVQ 248
Query: 298 YGELVHVKIPAGKRCGFVQFANR 320
+GEL++VKIP GK CGFVQ+A+R
Sbjct: 249 FGELIYVKIPVGKGCGFVQYASR 271
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
V PD+ +++IG+L P + E + I GE + K+ K G GF+++
Sbjct: 216 AVLPDSDPTNT-TIFIGNLDPNVIEDELRQICVQFGELIYVKIPVGK------GCGFVQY 268
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNW 151
S A+AE +Q +GT + +Q RL+W
Sbjct: 269 ASRASAEEAVQRLHGTMI--GQQAVRLSW 295
>gi|238005936|gb|ACR34003.1| unknown [Zea mays]
gi|414865083|tpg|DAA43640.1| TPA: RNA-binding post-transcriptional regulator csx1 [Zea mays]
Length = 415
Score = 337 bits (863), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 165/263 (62%), Positives = 199/263 (75%), Gaps = 12/263 (4%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S + +R+LWIGDLQ W +E+Y+ S F HTGE S K+IRNK T+ EGYGFIEFVSH AA
Sbjct: 10 SLEEVRTLWIGDLQYWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGFIEFVSHEAA 69
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
E++LQT+NGTQMP TE FRLNWA++ +GERR D G D +IFVGDLA DVTDY+LQETFR
Sbjct: 70 EKILQTYNGTQMPGTEHTFRLNWASFSSGERRPDPGSDHSIFVGDLAPDVTDYLLQETFR 129
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
YSSV+GAKVVTD TGRSKGYGFV+F DE+E+ R+MTEMNGV CSTRPMRI AA K
Sbjct: 130 VNYSSVRGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGVYCSTRPMRIS-AAIPK 188
Query: 249 AATGQQYQ----KATYQNT-------QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+TG Q Q KA Y T Q ++DP NTTIF+G LDP+V +D L+ + Q
Sbjct: 189 KSTGSQLQYSAAKAVYPATAYAMPQLQAVLPDSDPTNTTIFIGNLDPNVIEDELRQICVQ 248
Query: 298 YGELVHVKIPAGKRCGFVQFANR 320
+GEL++VKIP GK CGFVQ+A+R
Sbjct: 249 FGELIYVKIPVGKGCGFVQYASR 271
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
V PD+ +++IG+L P + E + I GE + K+ K G GF+++
Sbjct: 216 AVLPDSDPTNT-TIFIGNLDPNVIEDELRQICVQFGELIYVKIPVGK------GCGFVQY 268
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNW 151
S A+AE +Q +GT + +Q RL+W
Sbjct: 269 ASRASAEEAVQRLHGTMI--GQQAVRLSW 295
>gi|302784144|ref|XP_002973844.1| hypothetical protein SELMODRAFT_100454 [Selaginella moellendorffii]
gi|302803590|ref|XP_002983548.1| hypothetical protein SELMODRAFT_118305 [Selaginella moellendorffii]
gi|300148791|gb|EFJ15449.1| hypothetical protein SELMODRAFT_118305 [Selaginella moellendorffii]
gi|300158176|gb|EFJ24799.1| hypothetical protein SELMODRAFT_100454 [Selaginella moellendorffii]
Length = 350
Score = 336 bits (862), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 166/268 (61%), Positives = 203/268 (75%), Gaps = 5/268 (1%)
Query: 54 PPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF 113
PP +Q Q + +P ++ +++LW+GDLQ WM+E Y+ S F HT E KVIRNKQT +
Sbjct: 3 PPLKQGQAH--SPGHANGELKTLWVGDLQYWMDEGYLYSCFAHTSEVQVAKVIRNKQTGY 60
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGD 173
SEGYGF+EF +H+ AE+VLQ+FNGTQMPST+ FRLNWA +G GERR D GPDF+IFVGD
Sbjct: 61 SEGYGFVEFTNHSTAEKVLQSFNGTQMPSTDIAFRLNWACFGIGERRPDQGPDFSIFVGD 120
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
LA DVTDY+LQETF++ YSSVKGAKVV D TT RSKGYGFVRFGDE+E++R+MTEM GV
Sbjct: 121 LAPDVTDYMLQETFQSRYSSVKGAKVVMDTTTARSKGYGFVRFGDEAEKMRAMTEMAGVY 180
Query: 234 CSTRPMRIGPAATKKAATGQQYQKATYQN-TQGSQGENDPNNTTIFVGGLDPSVTDDILK 292
CSTRPMRI A KK+ +QN +NDP+NTT+FVGGLD SV D+ LK
Sbjct: 181 CSTRPMRISTATPKKSLA--TIPPKGFQNFGVPPLTDNDPSNTTVFVGGLDHSVKDEDLK 238
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQFANR 320
VF Q+G++ +VKIPAGK CGFVQF R
Sbjct: 239 QVFSQFGDIQYVKIPAGKNCGFVQFYTR 266
>gi|242042043|ref|XP_002468416.1| hypothetical protein SORBIDRAFT_01g045570 [Sorghum bicolor]
gi|241922270|gb|EER95414.1| hypothetical protein SORBIDRAFT_01g045570 [Sorghum bicolor]
Length = 415
Score = 336 bits (862), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 165/263 (62%), Positives = 199/263 (75%), Gaps = 12/263 (4%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S + +R+LWIGDLQ W +E+Y+ S F HTGE S K+IRNK T+ EGYGFIEFVSH AA
Sbjct: 10 SLEEVRTLWIGDLQYWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGFIEFVSHEAA 69
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
E++LQT+NGTQMP TE FRLNWA++ +GERR D G D +IFVGDLA DVTDY+LQETFR
Sbjct: 70 EKILQTYNGTQMPGTEHTFRLNWASFSSGERRPDPGSDHSIFVGDLAPDVTDYLLQETFR 129
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
Y SV+GAKVVTD TGRSKGYGFV+F DE+E+ R+MTEMNGV CSTRPMRI AA K
Sbjct: 130 VNYPSVRGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGVYCSTRPMRIS-AAIPK 188
Query: 249 AATGQQYQ----KATYQNT-------QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+TG Q Q KA Y T Q ++DP NTTIF+G LDP+VT+D L+ + Q
Sbjct: 189 KSTGSQLQYSAAKAVYPATAYAMPQLQAVLPDSDPTNTTIFIGNLDPNVTEDELRQICVQ 248
Query: 298 YGELVHVKIPAGKRCGFVQFANR 320
+GEL++VKIP GK CGFVQ+A+R
Sbjct: 249 FGELIYVKIPVGKGCGFVQYASR 271
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
V PD+ +++IG+L P + E + I GE + K+ K G GF+++
Sbjct: 216 AVLPDSDPTNT-TIFIGNLDPNVTEDELRQICVQFGELIYVKIPVGK------GCGFVQY 268
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNW 151
S A+AE +Q +GT + +Q RL+W
Sbjct: 269 ASRASAEEAVQRLHGTMI--GQQAVRLSW 295
>gi|449469386|ref|XP_004152401.1| PREDICTED: polyadenylate-binding protein RBP47B'-like [Cucumis
sativus]
Length = 422
Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 166/257 (64%), Positives = 196/257 (76%), Gaps = 9/257 (3%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ W++ESY+ S F HTGE +S K+IRNK T EGYGF+EFVSHAAAER+L
Sbjct: 19 VRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERIL 78
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT+NGTQMP TEQ FRLNWA++G GERR D GP+ +IFVGDLA DVTDY+LQETFRA Y
Sbjct: 79 QTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYP 138
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA-AT 251
SV+GAKVVTD TGRSKGYGFV+F DE+E+ R+M+EMNGV CSTRPMRI A KK
Sbjct: 139 SVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRISAATPKKTIGV 198
Query: 252 GQQYQ--KATY------QNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVH 303
QQY KA Y + + D NNTTIFVG LDP++T++ LK F Q+GE+ +
Sbjct: 199 QQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPNITEEELKQTFLQFGEIAY 258
Query: 304 VKIPAGKRCGFVQFANR 320
VKIPAGK CGFVQF R
Sbjct: 259 VKIPAGKGCGFVQFGTR 275
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 95/235 (40%), Gaps = 38/235 (16%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVS 124
PDA + S+++GDL P + + + F V G KV+ + T S+GYGF++F
Sbjct: 107 PDAGPE--HSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFAD 164
Query: 125 HAAAERVLQTFNGTQMPS---------------TEQNFRLNWATYGAGERRQD------- 162
R + NG + +Q + L A Y
Sbjct: 165 ENERNRAMSEMNGVYCSTRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPAD 224
Query: 163 -DGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
D + TIFVG+L ++T+ L++TF + + K+ KG GFV+FG +
Sbjct: 225 YDANNTTIFVGNLDPNITEEELKQTFLQ-FGEIAYVKIPA------GKGCGFVQFGTRAS 277
Query: 222 QLRSMTEMNGVLCSTRPMRI----GPAATKKAAT-GQQYQKATYQNTQGSQGEND 271
++ +M G + + +R PAA + T GQQ + G G D
Sbjct: 278 AEEAIQKMQGKIIGQQVVRTSWGRNPAAKQDLTTWGQQVDPNQWSAYYGYGGTYD 332
>gi|449523756|ref|XP_004168889.1| PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis
sativus]
Length = 437
Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 163/262 (62%), Positives = 197/262 (75%), Gaps = 10/262 (3%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S+D +++LWIGDLQPWM+E+Y+ + F HTGE S KVI NKQT SEGYGF+EF SH A
Sbjct: 95 STDEVKTLWIGDLQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTA 154
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
E+VLQ +NGT MP+TE FRLNWAT+ A +RR D G D +IFVGDLAADVTD +LQETF
Sbjct: 155 EKVLQNYNGTIMPNTELPFRLNWATFSANDRRPDTGSDLSIFVGDLAADVTDAILQETFS 214
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ Y+SVKGAKVV D +GRSKGYGFVRFGDE+E+ R+MTEMNG+ CS+RPMRIG A KK
Sbjct: 215 SRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRPMRIGVATPKK 274
Query: 249 AATGQQ-YQKATY---------QNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQY 298
A+ QQ Y QGSQ +++ NNTTIFVGGLD V+D+ LK F ++
Sbjct: 275 ASGYQQGYASQALVLAGGHPNGMAVQGSQSDSESNNTTIFVGGLDSDVSDEDLKQAFSKF 334
Query: 299 GELVHVKIPAGKRCGFVQFANR 320
G++V VKIP GK CGFVQFANR
Sbjct: 335 GDVVSVKIPIGKGCGFVQFANR 356
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 83/201 (41%), Gaps = 34/201 (16%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVS 124
PD SD S+++GDL + ++ + F V G KV+ + + S+GYGF+ F
Sbjct: 187 PDTGSD--LSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGD 244
Query: 125 HAAAERVLQTFNG-----------TQMPSTEQNFRLNWATYGA-------------GERR 160
R + NG P ++ +A+ G +
Sbjct: 245 ENERTRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQGSQS 304
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+ + TIFVG L +DV+D L++ F + + V K+ KG GFV+F +
Sbjct: 305 DSESNNTTIFVGGLDSDVSDEDLKQAF-SKFGDVVSVKIPI------GKGCGFVQFANRK 357
Query: 221 EQLRSMTEMNGVLCSTRPMRI 241
++ +NG + + +R+
Sbjct: 358 NAEDAIQGLNGTVIGKQTVRL 378
>gi|224104133|ref|XP_002313332.1| predicted protein [Populus trichocarpa]
gi|222849740|gb|EEE87287.1| predicted protein [Populus trichocarpa]
Length = 415
Score = 334 bits (856), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 169/271 (62%), Positives = 197/271 (72%), Gaps = 9/271 (3%)
Query: 59 TQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYG 118
T P G A+ + +R+LWIGDLQ W +ESY+ S F HTGE VS K+IRNK T EGYG
Sbjct: 5 TAPGGYHQPATLEEVRTLWIGDLQYWADESYLTSCFAHTGEVVSIKIIRNKLTGQPEGYG 64
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADV 178
F+EFVSHAAAER+LQT+NGTQMP TEQ FRLNWA++G GERR D GP+ +IFVGDLA DV
Sbjct: 65 FVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDV 124
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
TDY+LQETFR Y SV+GAKVVTD TGRSKGYGFV+F DE+E+ R+MTEMNGV CSTRP
Sbjct: 125 TDYLLQETFRVHYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVFCSTRP 184
Query: 239 MRIGPAATKKAATGQQ---YQKATY------QNTQGSQGENDPNNTTIFVGGLDPSVTDD 289
MRI A KK + QQ KA Y Q + D NTTIFVG LDP+ T++
Sbjct: 185 MRISMATPKKTTSFQQQYAVPKAFYPAPAYTAPVQVVSADGDVTNTTIFVGNLDPNATEE 244
Query: 290 ILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
L+ F Q GE+ VKIPAG+ CGFVQFA R
Sbjct: 245 DLRQTFLQLGEIASVKIPAGRGCGFVQFATR 275
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 33/200 (16%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFG-HTGEFVSGKVIRNKQTNFSEGYGFIEFVS 124
PDA + S+++GDL P + + + F H KV+ + T S+GYGF++F
Sbjct: 107 PDAGPE--HSIFVGDLAPDVTDYLLQETFRVHYPSVRGAKVVTDPNTGRSKGYGFVKFAD 164
Query: 125 HAAAERVLQTFNGT---------------QMPSTEQNFRLNWATYGAGE--------RRQ 161
R + NG + S +Q + + A Y A
Sbjct: 165 ENERNRAMTEMNGVFCSTRPMRISMATPKKTTSFQQQYAVPKAFYPAPAYTAPVQVVSAD 224
Query: 162 DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
D + TIFVG+L + T+ L++TF + + K+ R G GFV+F +
Sbjct: 225 GDVTNTTIFVGNLDPNATEEDLRQTFLQL-GEIASVKIPAGR------GCGFVQFATRTS 277
Query: 222 QLRSMTEMNGVLCSTRPMRI 241
++ M G + +P+RI
Sbjct: 278 AEEAIQRMQGHVIGQQPVRI 297
>gi|224137382|ref|XP_002327112.1| predicted protein [Populus trichocarpa]
gi|222835427|gb|EEE73862.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 162/250 (64%), Positives = 193/250 (77%), Gaps = 4/250 (1%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++WIGDL WM+E+Y+ S F TGE S KVIRNKQT SEGYGF+EF++HA AE+VLQ
Sbjct: 93 KTIWIGDLHHWMDENYLHSCFVSTGEIASIKVIRNKQTGLSEGYGFVEFLTHATAEKVLQ 152
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
+ G MP+TEQ FRLNWAT+ G++R D+ PD +IFVGDLAADVTD +LQETF + Y S
Sbjct: 153 NYGGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLQETFVSKYPS 212
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VK AKVV D TGRSKGYGFVRFGD+SE+ ++MTEMNGV CS+RPMRIG AAT + ++G
Sbjct: 213 VKAAKVVFDANTGRSKGYGFVRFGDDSERTQAMTEMNGVYCSSRPMRIG-AATPRKSSGY 271
Query: 254 QYQKATYQN---TQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
Q Q N QG Q + D NNTTIFVGGLDP+VTD+ LK F QYGE+V VKIP GK
Sbjct: 272 QQQGGYGSNGASAQGFQSDGDSNNTTIFVGGLDPNVTDEDLKQPFSQYGEIVSVKIPVGK 331
Query: 311 RCGFVQFANR 320
CGFVQFANR
Sbjct: 332 GCGFVQFANR 341
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 28/186 (15%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL + +S + F V + KV+ + T S+GYGF+ F + + +
Sbjct: 187 SIFVGDLAADVTDSLLQETFVSKYPSVKAAKVVFDANTGRSKGYGFVRFGDDSERTQAMT 246
Query: 134 TFNGTQMPSTEQNFRLNWAT------------YGA------GERRQDDGPDFTIFVGDLA 175
NG S + R+ AT YG+ G + D + TIFVG L
Sbjct: 247 EMNGVYCSS--RPMRIGAATPRKSSGYQQQGGYGSNGASAQGFQSDGDSNNTTIFVGGLD 304
Query: 176 ADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCS 235
+VTD L++ F + Y + K+ KG GFV+F + ++ ++NG +
Sbjct: 305 PNVTDEDLKQPF-SQYGEIVSVKIPV------GKGCGFVQFANRDNAEEALQKLNGTVIG 357
Query: 236 TRPMRI 241
+ +R+
Sbjct: 358 KQTVRL 363
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + + + F GE VS K+ K G GF++F + AE LQ
Sbjct: 297 TIFVGGLDPNVTDEDLKQPFSQYGEIVSVKIPVGK------GCGFVQFANRDNAEEALQK 350
Query: 135 FNGTQMPSTEQNFRLNWA 152
NGT + +Q RL+W
Sbjct: 351 LNGTVI--GKQTVRLSWG 366
>gi|108706453|gb|ABF94248.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|215694482|dbj|BAG89475.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 416
Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 162/263 (61%), Positives = 196/263 (74%), Gaps = 12/263 (4%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S + +R+LWIGDLQ W +E+Y+ + F HTGE S K+IRNK T+ EGYGFIEF+SH A
Sbjct: 11 SLEEVRTLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFIEFISHEVA 70
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
E+VLQT+NGTQMP TE FRLNWA++ +GERR D GPD +IFVGDLA DVTDY+LQETFR
Sbjct: 71 EKVLQTYNGTQMPGTEHTFRLNWASFSSGERRPDAGPDHSIFVGDLAPDVTDYLLQETFR 130
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
Y SVKGAKVVTD TGRSKGYGFV+F DE+E+ R+MTEMNG+ CSTRPMRI AA K
Sbjct: 131 VSYPSVKGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGMYCSTRPMRIS-AAIPK 189
Query: 249 AATGQQYQ----KATY-------QNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
TG Q Q KA Y Q ++DP NTTIF+G LD +VT+D L+ + Q
Sbjct: 190 KTTGSQLQYGAAKAMYPAAGYAVPQVQPVLPDSDPTNTTIFIGNLDQNVTEDELRQICVQ 249
Query: 298 YGELVHVKIPAGKRCGFVQFANR 320
+GEL++VKIPA K CGFVQ+A+R
Sbjct: 250 FGELIYVKIPANKACGFVQYASR 272
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 11/104 (10%)
Query: 58 QTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGY 117
Q QP V PD+ +++IG+L + E + I GE + K+ NK
Sbjct: 214 QVQP--VLPDSDPTNT-TIFIGNLDQNVTEDELRQICVQFGELIYVKIPANKAC------ 264
Query: 118 GFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQ 161
GF+++ S A+AE +Q +GT + +Q RL+W A ++ Q
Sbjct: 265 GFVQYASRASAEEAVQRLHGTTI--GQQVVRLSWGRSPASKQDQ 306
>gi|218192181|gb|EEC74608.1| hypothetical protein OsI_10216 [Oryza sativa Indica Group]
Length = 416
Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 162/263 (61%), Positives = 196/263 (74%), Gaps = 12/263 (4%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S + +R+LWIGDLQ W +E+Y+ + F HTGE S K+IRNK T+ EGYGFIEF+SH A
Sbjct: 11 SLEEVRTLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFIEFISHEVA 70
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
E+VLQT+NGTQMP TE FRLNWA++ +GERR D GPD +IFVGDLA DVTDY+LQETFR
Sbjct: 71 EKVLQTYNGTQMPGTEHTFRLNWASFSSGERRPDAGPDHSIFVGDLAPDVTDYLLQETFR 130
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
Y SVKGAKVVTD TGRSKGYGFV+F DE+E+ R+MTEMNG+ CSTRPMRI AA K
Sbjct: 131 VSYPSVKGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGMYCSTRPMRIS-AAIPK 189
Query: 249 AATGQQYQ----KATY-------QNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
TG Q Q KA Y Q ++DP NTTIF+G LD +VT+D L+ + Q
Sbjct: 190 KTTGSQLQYGAAKAMYPAAGYAVPQVQPVLPDSDPTNTTIFIGNLDQNVTEDELRQICVQ 249
Query: 298 YGELVHVKIPAGKRCGFVQFANR 320
+GEL++VKIPA K CGFVQ+A+R
Sbjct: 250 FGELIYVKIPANKACGFVQYASR 272
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 11/104 (10%)
Query: 58 QTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGY 117
Q QP V PD+ +++IG+L + E + I GE + K+ NK
Sbjct: 214 QVQP--VLPDSDPTNT-TIFIGNLDQNVTEDELRQICVQFGELIYVKIPANKAC------ 264
Query: 118 GFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQ 161
GF+++ S A+AE +Q +GT + +Q RL+W A ++ Q
Sbjct: 265 GFVQYASRASAEEAVQRLHGTTI--GQQVVRLSWGRSPASKQDQ 306
>gi|115451047|ref|NP_001049124.1| Os03g0174100 [Oryza sativa Japonica Group]
gi|113547595|dbj|BAF11038.1| Os03g0174100, partial [Oryza sativa Japonica Group]
Length = 438
Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 162/263 (61%), Positives = 196/263 (74%), Gaps = 12/263 (4%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S + +R+LWIGDLQ W +E+Y+ + F HTGE S K+IRNK T+ EGYGFIEF+SH A
Sbjct: 33 SLEEVRTLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFIEFISHEVA 92
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
E+VLQT+NGTQMP TE FRLNWA++ +GERR D GPD +IFVGDLA DVTDY+LQETFR
Sbjct: 93 EKVLQTYNGTQMPGTEHTFRLNWASFSSGERRPDAGPDHSIFVGDLAPDVTDYLLQETFR 152
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
Y SVKGAKVVTD TGRSKGYGFV+F DE+E+ R+MTEMNG+ CSTRPMRI AA K
Sbjct: 153 VSYPSVKGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGMYCSTRPMRIS-AAIPK 211
Query: 249 AATGQQYQ----KATY-------QNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
TG Q Q KA Y Q ++DP NTTIF+G LD +VT+D L+ + Q
Sbjct: 212 KTTGSQLQYGAAKAMYPAAGYAVPQVQPVLPDSDPTNTTIFIGNLDQNVTEDELRQICVQ 271
Query: 298 YGELVHVKIPAGKRCGFVQFANR 320
+GEL++VKIPA K CGFVQ+A+R
Sbjct: 272 FGELIYVKIPANKACGFVQYASR 294
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 11/104 (10%)
Query: 58 QTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGY 117
Q QP V PD+ +++IG+L + E + I GE + K+ NK
Sbjct: 236 QVQP--VLPDSDPTNT-TIFIGNLDQNVTEDELRQICVQFGELIYVKIPANKAC------ 286
Query: 118 GFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQ 161
GF+++ S A+AE +Q +GT + +Q RL+W A ++ Q
Sbjct: 287 GFVQYASRASAEEAVQRLHGTTI--GQQVVRLSWGRSPASKQDQ 328
>gi|297741313|emb|CBI32444.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 161/263 (61%), Positives = 193/263 (73%), Gaps = 11/263 (4%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S+D I++LW+GDL WM+++Y+ + FGHTGE S K+IRNKQT SEGYGF+EF S A A
Sbjct: 4 STDEIKTLWVGDLHQWMDDNYLRTCFGHTGEVSSIKIIRNKQTGQSEGYGFVEFFSRATA 63
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
E++L ++NGT MP+TEQ FRLNWAT+ G+RR D G D +IFVGDLA+DVTD +LQETF
Sbjct: 64 EKILHSYNGTLMPNTEQPFRLNWATFSTGDRRTDAGSDLSIFVGDLASDVTDALLQETFA 123
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
Y SVKGAKVVTD TGRSKGYGFVRFGDE+E+ R+M EMNG+ CS+RPMRIG A KK
Sbjct: 124 TRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVATPKK 183
Query: 249 AATGQQY-----------QKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
A+ QQ + QGSQ D NTTIFVGGLD VTD+ L+ F Q
Sbjct: 184 ASGYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTNTTIFVGGLDSEVTDEDLRQSFSQ 243
Query: 298 YGELVHVKIPAGKRCGFVQFANR 320
+GE+V VKIP GK CGFVQFANR
Sbjct: 244 FGEVVSVKIPVGKGCGFVQFANR 266
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 87/201 (43%), Gaps = 35/201 (17%)
Query: 67 DASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSH 125
DA SD S+++GDL + ++ + F V G KV+ + T S+GYGF+ F
Sbjct: 97 DAGSD--LSIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDE 154
Query: 126 AAAERVLQTFNGTQMPS--------------------TEQNFRL--NWATYGA---GERR 160
R + NG S + Q L A+ GA G +
Sbjct: 155 NERSRAMNEMNGIYCSSRPMRIGVATPKKASGYQQQYSSQALVLAGGNASNGAVAQGSQA 214
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
D + TIFVG L ++VTD L+++F + + V K+ KG GFV+F + +
Sbjct: 215 NGDSTNTTIFVGGLDSEVTDEDLRQSF-SQFGEVVSVKIPV------GKGCGFVQFANRN 267
Query: 221 EQLRSMTEMNGVLCSTRPMRI 241
++ +NG + + +R+
Sbjct: 268 SAEDALQRLNGTVIGKQTVRL 288
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L + + + F GE VS K+ K G GF++F + +AE LQ
Sbjct: 222 TIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVGK------GCGFVQFANRNSAEDALQR 275
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDD 163
NGT + +Q RL+W A ++ ++D
Sbjct: 276 LNGTVIG--KQTVRLSWGRNPASKQWRND 302
>gi|30524689|emb|CAC85246.1| salt tolerance protein 6 [Beta vulgaris]
Length = 322
Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 158/236 (66%), Positives = 187/236 (79%), Gaps = 4/236 (1%)
Query: 85 MEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTE 144
M+E+YI + F +GE V+ K+IRNKQT SE YGFIEF +HAAAER+LQT+N T MP+ E
Sbjct: 1 MDENYIRTCFAQSGELVNVKIIRNKQTMQSECYGFIEFSTHAAAERILQTYNNTLMPNVE 60
Query: 145 QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRT 204
QN+RLNWA YG+GE+R +D D+TIFVGDLA DVTDY LQETFR Y SVKGAKVV DR
Sbjct: 61 QNYRLNWAFYGSGEKRGEDASDYTIFVGDLAPDVTDYTLQETFRVRYPSVKGAKVVIDRL 120
Query: 205 TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQ 264
T RSKGYGFVRFGDESEQ R+M+EMNG++C R MRIG AA KK+ G A+YQN Q
Sbjct: 121 TSRSKGYGFVRFGDESEQARAMSEMNGMMCLGRAMRIGAAANKKSVGG----TASYQNNQ 176
Query: 265 GSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
G+ ++DP+NTTIFVG LD +VTD+ L+ F YGELVHVKIPAGK+CGFVQF NR
Sbjct: 177 GTPNDSDPSNTTIFVGNLDSNVTDEHLRQTFSPYGELVHVKIPAGKQCGFVQFTNR 232
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 22/180 (12%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++++GDL P + + + F V G KV+ ++ T+ S+GYGF+ F + R +
Sbjct: 84 TIFVGDLAPDVTDYTLQETFRVRYPSVKGAKVVIDRLTSRSKGYGFVRFGDESEQARAMS 143
Query: 134 TFNGTQMPSTEQNFRL----NWATYGAGERRQD--------DGPDFTIFVGDLAADVTDY 181
NG M + R+ N + G Q+ D + TIFVG+L ++VTD
Sbjct: 144 EMNG--MMCLGRAMRIGAAANKKSVGGTASYQNNQGTPNDSDPSNTTIFVGNLDSNVTDE 201
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
L++TF + Y + K+ K GFV+F + S ++ +NG+ R +R+
Sbjct: 202 HLRQTF-SPYGELVHVKIPA------GKQCGFVQFTNRSSAEEALRVLNGMQLGGRNVRL 254
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P+ S ++++G+L + + ++ F GE V K+ KQ GF++F +
Sbjct: 179 PNDSDPSNTTIFVGNLDSNVTDEHLRQTFSPYGELVHVKIPAGKQC------GFVQFTNR 232
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNW 151
++AE L+ NG Q+ +N RL+W
Sbjct: 233 SSAEEALRVLNGMQLGG--RNVRLSW 256
>gi|356500047|ref|XP_003518846.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 431
Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 165/265 (62%), Positives = 192/265 (72%), Gaps = 12/265 (4%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
ASSD IR++W+GDL WM+E+Y+ + F HTGE VS KVIRNKQT SEGYGF+EF S
Sbjct: 94 ASSDEIRTVWLGDLHHWMDENYLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFVEFYSRGT 153
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDG-PDFTIFVGDLAADVTDYVLQET 186
AE+VLQ +NGT MP+T+Q FRLNWAT+ AGERR D D +IFVGDLA DVTD +LQ+T
Sbjct: 154 AEKVLQNYNGTMMPNTDQAFRLNWATFSAGERRSSDATSDLSIFVGDLAIDVTDAMLQDT 213
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
F YSS+KGAKVV D TGRSKGYGFVRFGDE+E+ R+MTEMNGV CS+RPMRIG A
Sbjct: 214 FAGRYSSIKGAKVVIDSNTGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRPMRIGVATP 273
Query: 247 KKA-ATGQQY----------QKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVF 295
KK QQY A QGS E D NNTTIFVGGLD +D+ L+ F
Sbjct: 274 KKTYGFQQQYSSQAVVLAGGHSANGAVAQGSHSEGDINNTTIFVGGLDSDTSDEDLRQPF 333
Query: 296 GQYGELVHVKIPAGKRCGFVQFANR 320
Q+GE+V VKIP GK CGFVQFA+R
Sbjct: 334 LQFGEVVSVKIPVGKGCGFVQFADR 358
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 84/205 (40%), Gaps = 39/205 (19%)
Query: 65 APDASSDGIRSLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGFIEFV 123
+ DA+SD S+++GDL + ++ + F G KV+ + T S+GYGF+ F
Sbjct: 187 SSDATSD--LSIFVGDLAIDVTDAMLQDTFAGRYSSIKGAKVVIDSNTGRSKGYGFVRFG 244
Query: 124 SHAAAERVLQTFNGTQMPSTEQNFRLNWAT----YG-----------------------A 156
R + NG S + R+ AT YG
Sbjct: 245 DENERTRAMTEMNGVYCSS--RPMRIGVATPKKTYGFQQQYSSQAVVLAGGHSANGAVAQ 302
Query: 157 GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRF 216
G + D + TIFVG L +D +D L++ F + V K+ KG GFV+F
Sbjct: 303 GSHSEGDINNTTIFVGGLDSDTSDEDLRQPFLQ-FGEVVSVKIPV------GKGCGFVQF 355
Query: 217 GDESEQLRSMTEMNGVLCSTRPMRI 241
D ++ +NG + + +R+
Sbjct: 356 ADRKNAEEAIQGLNGTVIGKQTVRL 380
>gi|357113824|ref|XP_003558701.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 418
Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 156/258 (60%), Positives = 194/258 (75%), Gaps = 10/258 (3%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ W +E+Y+ + F HTGE S K+IRNK TN EGYGFIEF+SH AAE+VL
Sbjct: 16 VRTLWIGDLQFWADEAYLYNCFAHTGEVQSVKIIRNKVTNLPEGYGFIEFISHEAAEKVL 75
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT+NG QMP +E FRLNWA++ +GERR D GPD +IFVGDLA DVTDY+LQETFR YS
Sbjct: 76 QTYNGAQMPGSEHTFRLNWASFSSGERRPDAGPDHSIFVGDLAPDVTDYLLQETFRVNYS 135
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SV+GAKVVTD TGRSKGYGFV+F DE+E+ R+M+EMNGV CSTRPMRI A KK++
Sbjct: 136 SVRGAKVVTDPNTGRSKGYGFVKFADENEKTRAMSEMNGVYCSTRPMRISAAIPKKSSGS 195
Query: 253 Q--------QYQKATYQ--NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
Q Y A Y Q + ++D NTTIF+G LDP+ T++ L+ + Q+GEL+
Sbjct: 196 QLQYGTAKAMYPAAAYAVPQAQPALPDSDLTNTTIFIGNLDPNATEEELRQLCVQFGELI 255
Query: 303 HVKIPAGKRCGFVQFANR 320
+VKIP GK CGFVQ+A+R
Sbjct: 256 YVKIPVGKGCGFVQYASR 273
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 83/201 (41%), Gaps = 34/201 (16%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVS 124
PDA D S+++GDL P + + + F V G KV+ + T S+GYGF++F
Sbjct: 104 PDAGPD--HSIFVGDLAPDVTDYLLQETFRVNYSSVRGAKVVTDPNTGRSKGYGFVKFAD 161
Query: 125 HAAAERVLQTFNGT-----------QMPSTEQNFRLNWAT----YGAGERR--------- 160
R + NG +P +L + T Y A
Sbjct: 162 ENEKTRAMSEMNGVYCSTRPMRISAAIPKKSSGSQLQYGTAKAMYPAAAYAVPQAQPALP 221
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
D + TIF+G+L + T+ L++ V+ +++ + KG GFV++ +
Sbjct: 222 DSDLTNTTIFIGNLDPNATEEELRQL------CVQFGELIYVKIP-VGKGCGFVQYASRA 274
Query: 221 EQLRSMTEMNGVLCSTRPMRI 241
++ ++G + + +R+
Sbjct: 275 SAEEAVQRLHGTMIGQQVVRL 295
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+++IG+L P E + + GE + K+ K G GF+++ S A+AE +Q
Sbjct: 229 TIFIGNLDPNATEEELRQLCVQFGELIYVKIPVGK------GCGFVQYASRASAEEAVQR 282
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQ 161
+GT + +Q RL+W A ++ Q
Sbjct: 283 LHGTMI--GQQVVRLSWGRSPANKQDQ 307
>gi|222640040|gb|EEE68172.1| hypothetical protein OsJ_26296 [Oryza sativa Japonica Group]
Length = 329
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 164/236 (69%), Positives = 193/236 (81%), Gaps = 7/236 (2%)
Query: 85 MEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTE 144
M+E+ +++ F TGE S K+IR+KQT +GYGFIEF SHA AERVLQT+NG MP+ E
Sbjct: 1 MDENTVSACFAPTGELQSVKLIRDKQTGQLQGYGFIEFTSHAGAERVLQTYNGAMMPNVE 60
Query: 145 QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRT 204
Q +RLNWA+ AGE+R DD PD+TIFVGDLAADVTDY+LQETFR Y SVKGAKVVTD+
Sbjct: 61 QTYRLNWAS--AGEKR-DDTPDYTIFVGDLAADVTDYILQETFRVHYPSVKGAKVVTDKM 117
Query: 205 TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQ 264
T RSKGYGFV+FGD SEQ R+MTEMNG++CS+RPMRIGPAA KK ATG Q + + Q
Sbjct: 118 TMRSKGYGFVKFGDPSEQARAMTEMNGMVCSSRPMRIGPAANKK-ATGVQEKVPS---AQ 173
Query: 265 GSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
G Q ++DP+NTTIFVGGLDPSVTDD+LK VF YG++VHVKIP GKRCGFVQFANR
Sbjct: 174 GVQSDSDPSNTTIFVGGLDPSVTDDMLKQVFTPYGDVVHVKIPVGKRCGFVQFANR 229
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + + + +F G+ V K+ K+ GF++F + A+A+ L
Sbjct: 185 TIFVGGLDPSVTDDMLKQVFTPYGDVVHVKIPVGKRC------GFVQFANRASADEALVL 238
Query: 135 FNGTQMPSTEQNFRLNW 151
GT + QN RL+W
Sbjct: 239 LQGTLIGG--QNVRLSW 253
>gi|82621158|gb|ABB86267.1| DNA binding protein ACBF-like [Solanum tuberosum]
Length = 372
Score = 327 bits (839), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 156/262 (59%), Positives = 197/262 (75%), Gaps = 10/262 (3%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
SS+ +++WIGDLQ WM+E+Y+ S F H GE +S K+IRNKQT SE YGF+EF +HAAA
Sbjct: 28 SSEDNKTIWIGDLQQWMDENYLHSCFSHAGEVISVKIIRNKQTGQSERYGFVEFNTHAAA 87
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
E+VLQ++NGT MP+ EQ FRLNWA + AGE+R + G DF+IFVGDLA+DVTD +L++TF
Sbjct: 88 EKVLQSYNGTMMPNAEQPFRLNWAAFSAGEKRAETGSDFSIFVGDLASDVTDTMLRDTFA 147
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ + SVKGAKVV D TG SKGYGFVRFGDESE+ R+MTEMNG+ CS+RPMR+G A KK
Sbjct: 148 SRFPSVKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGIYCSSRPMRVGVATPKK 207
Query: 249 AATGQQYQK----------ATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQY 298
+ QQ+ + T GSQ + D +NTTIFVGGLD VTD+ L+ F Q+
Sbjct: 208 PSAQQQFSSQAVILSGGYASNGSATHGSQSDGDSSNTTIFVGGLDSDVTDEELRQSFTQF 267
Query: 299 GELVHVKIPAGKRCGFVQFANR 320
GE+V VKIPAGK CGFVQF++R
Sbjct: 268 GEVVSVKIPAGKGCGFVQFSDR 289
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 32/192 (16%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL + ++ + F V G KV+ + T S+GYGF+ F + R +
Sbjct: 127 SIFVGDLASDVTDTMLRDTFASRFPSVKGAKVVVDANTGHSKGYGFVRFGDESERSRAMT 186
Query: 134 TFNGT--------------QMPSTEQNFRL-------NWATYGA---GERRQDDGPDFTI 169
NG + PS +Q F +A+ G+ G + D + TI
Sbjct: 187 EMNGIYCSSRPMRVGVATPKKPSAQQQFSSQAVILSGGYASNGSATHGSQSDGDSSNTTI 246
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
FVG L +DVTD L+++F + V K+ KG GFV+F D S ++ ++
Sbjct: 247 FVGGLDSDVTDEELRQSFTQ-FGEVVSVKIPA------GKGCGFVQFSDRSSAQEAIQKL 299
Query: 230 NGVLCSTRPMRI 241
+G + + +R+
Sbjct: 300 SGAIIGKQAVRL 311
>gi|225428741|ref|XP_002285031.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 416
Score = 327 bits (838), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 161/265 (60%), Positives = 193/265 (72%), Gaps = 13/265 (4%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEF--VSGKVIRNKQTNFSEGYGFIEFVSHA 126
S+D I++LW+GDL WM+++Y+ + FGHTGE S K+IRNKQT SEGYGF+EF S A
Sbjct: 76 STDEIKTLWVGDLHQWMDDNYLRTCFGHTGEVKVSSIKIIRNKQTGQSEGYGFVEFFSRA 135
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQET 186
AE++L ++NGT MP+TEQ FRLNWAT+ G+RR D G D +IFVGDLA+DVTD +LQET
Sbjct: 136 TAEKILHSYNGTLMPNTEQPFRLNWATFSTGDRRTDAGSDLSIFVGDLASDVTDALLQET 195
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
F Y SVKGAKVVTD TGRSKGYGFVRFGDE+E+ R+M EMNG+ CS+RPMRIG A
Sbjct: 196 FATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVATP 255
Query: 247 KKAATGQQY-----------QKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVF 295
KKA+ QQ + QGSQ D NTTIFVGGLD VTD+ L+ F
Sbjct: 256 KKASGYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTNTTIFVGGLDSEVTDEDLRQSF 315
Query: 296 GQYGELVHVKIPAGKRCGFVQFANR 320
Q+GE+V VKIP GK CGFVQFANR
Sbjct: 316 SQFGEVVSVKIPVGKGCGFVQFANR 340
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 87/201 (43%), Gaps = 35/201 (17%)
Query: 67 DASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSH 125
DA SD S+++GDL + ++ + F V G KV+ + T S+GYGF+ F
Sbjct: 171 DAGSD--LSIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDE 228
Query: 126 AAAERVLQTFNGTQMPS--------------------TEQNFRL--NWATYGA---GERR 160
R + NG S + Q L A+ GA G +
Sbjct: 229 NERSRAMNEMNGIYCSSRPMRIGVATPKKASGYQQQYSSQALVLAGGNASNGAVAQGSQA 288
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
D + TIFVG L ++VTD L+++F + + V K+ KG GFV+F + +
Sbjct: 289 NGDSTNTTIFVGGLDSEVTDEDLRQSF-SQFGEVVSVKIPV------GKGCGFVQFANRN 341
Query: 221 EQLRSMTEMNGVLCSTRPMRI 241
++ +NG + + +R+
Sbjct: 342 SAEDALQRLNGTVIGKQTVRL 362
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L + + + F GE VS K+ K G GF++F + +AE LQ
Sbjct: 296 TIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVGK------GCGFVQFANRNSAEDALQR 349
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDD 163
NGT + +Q RL+W A ++ ++D
Sbjct: 350 LNGTVIG--KQTVRLSWGRNPASKQWRND 376
>gi|356521484|ref|XP_003529385.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 431
Score = 327 bits (837), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 164/262 (62%), Positives = 190/262 (72%), Gaps = 12/262 (4%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D IR++W+GDL WM+E+Y+ + F HTGE VS KVIRNKQT SEGYGF+EF S A AE+
Sbjct: 98 DEIRTVWLGDLHHWMDENYLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFVEFYSRATAEK 157
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDG-PDFTIFVGDLAADVTDYVLQETFRA 189
VLQ +NGT MP+T+Q FRLNWAT+ AGERR D D +IFVGDLA DVTD +LQETF
Sbjct: 158 VLQNYNGTMMPNTDQAFRLNWATFSAGERRSSDATSDLSIFVGDLAIDVTDAMLQETFAG 217
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA 249
YSS+KGAKVV D TGRSKGYGFVRFGDE+E+ R+MTEMNGV CS+RPMRIG A KK
Sbjct: 218 RYSSIKGAKVVIDSNTGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRPMRIGVATPKKT 277
Query: 250 -ATGQQY----------QKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQY 298
QQY A QGS E D NNTTIFVGGLD +D+ L+ F Q+
Sbjct: 278 YGYQQQYSSQAVLLAGGHAANGAVAQGSHSEGDLNNTTIFVGGLDSDTSDEDLRQPFLQF 337
Query: 299 GELVHVKIPAGKRCGFVQFANR 320
GE+V VKIP GK CGFVQFA+R
Sbjct: 338 GEVVSVKIPVGKGCGFVQFADR 359
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 84/205 (40%), Gaps = 39/205 (19%)
Query: 65 APDASSDGIRSLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGFIEFV 123
+ DA+SD S+++GDL + ++ + F G KV+ + T S+GYGF+ F
Sbjct: 188 SSDATSD--LSIFVGDLAIDVTDAMLQETFAGRYSSIKGAKVVIDSNTGRSKGYGFVRFG 245
Query: 124 SHAAAERVLQTFNGTQMPSTEQNFRLNWAT----YGA----------------------- 156
R + NG S + R+ AT YG
Sbjct: 246 DENERTRAMTEMNGVYCSS--RPMRIGVATPKKTYGYQQQYSSQAVLLAGGHAANGAVAQ 303
Query: 157 GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRF 216
G + D + TIFVG L +D +D L++ F + V K+ KG GFV+F
Sbjct: 304 GSHSEGDLNNTTIFVGGLDSDTSDEDLRQPFLQ-FGEVVSVKIPV------GKGCGFVQF 356
Query: 217 GDESEQLRSMTEMNGVLCSTRPMRI 241
D ++ +NG + + +R+
Sbjct: 357 ADRKNAEEAIHALNGTVIGKQTVRL 381
>gi|449446975|ref|XP_004141245.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
gi|449498692|ref|XP_004160607.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
Length = 426
Score = 326 bits (836), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 175/336 (52%), Positives = 218/336 (64%), Gaps = 28/336 (8%)
Query: 7 SQPSDQTSQYQQQHQQWMAYQQQSQQQQQQHQTPVPPPVGWTPQPVPPPS---------- 56
SQP + ++QQQ W+ Q + P P P+PPP
Sbjct: 8 SQPQEPNQRHQQQPHPWIPPMQYPPPPMVMPHHMMTPQHYMAP-PLPPPYMHYHHQYHHH 66
Query: 57 ----QQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTN 112
Q +QP S +++W+GDL WM+ESY+ S F GE S KVIRNKQT
Sbjct: 67 HLPIQPSQPL----KGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQTG 122
Query: 113 FSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVG 172
SEGYGF+EF+SH AE+VLQ ++G MPSTEQ FRLNWAT+ G++R D+ PD +IFVG
Sbjct: 123 LSEGYGFVEFLSHTTAEKVLQNYSGMFMPSTEQTFRLNWATFSTGDKRSDNDPDLSIFVG 182
Query: 173 DLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGV 232
DLAADVTD +L ETF + + SVK AKVV D TGRSKGYGFVRFGD++E+ ++MTEMNG+
Sbjct: 183 DLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGI 242
Query: 233 LCSTRPMRIGPAATKKAATGQQYQKAT----YQN----TQGSQGENDPNNTTIFVGGLDP 284
CS+RPMRIG AAT + ++G Q Q ++ Y +QG Q E D NTTIFVGGLDP
Sbjct: 243 YCSSRPMRIG-AATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIFVGGLDP 301
Query: 285 SVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
+VTD+ L+ F QYGE+V VKIP GK CGFVQFANR
Sbjct: 302 NVTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANR 337
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 37/214 (17%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL + +S + F V + KV+ + T S+GYGF+ F + +
Sbjct: 178 SIFVGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMT 237
Query: 134 TFNGTQMPSTEQNFRLNWAT-----------------------YGAGERRQDDGPDFTIF 170
NG S + R+ AT + G + + D + TIF
Sbjct: 238 EMNGIYCSS--RPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIF 295
Query: 171 VGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMN 230
VG L +VTD L++ F + Y + K+ KG GFV+F + ++ ++ ++N
Sbjct: 296 VGGLDPNVTDEDLRQPF-SQYGEIVSVKIPV------GKGCGFVQFANRNDAEEALQKLN 348
Query: 231 GVLCSTRPMRI----GPAATKKAATGQQYQKATY 260
G + + +R+ PA + G Q+ A Y
Sbjct: 349 GTVIGKQTVRLSWGRNPANKQFRDFGNQWNGAYY 382
>gi|449513289|ref|XP_004164285.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
RBP47B'-like [Cucumis sativus]
Length = 427
Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 161/262 (61%), Positives = 191/262 (72%), Gaps = 14/262 (5%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ W++ESY+ S F HTGE +S K+IRNK T EGYGF+EFVSHAAAER+L
Sbjct: 19 VRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERIL 78
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT+NGTQMP TEQ FRLNWA++G GERR D GP+ +IFVGDLA DVTDY+LQETFRA Y
Sbjct: 79 QTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYP 138
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT- 251
SV+GAKVVTD TGRSKGYGFV+F DE+E+ R+M+EMNG CSTRPMRI A KK
Sbjct: 139 SVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGXYCSTRPMRISAATPKKPLVF 198
Query: 252 ------------GQQYQKATYQNTQGSQ-GENDPNNTTIFVGGLDPSVTDDILKTVFGQY 298
Y Y + + D NNTTIFVG LDP++T++ LK F Q+
Sbjct: 199 SSNTVXVKVMNNESMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPNITEEELKQTFLQF 258
Query: 299 GELVHVKIPAGKRCGFVQFANR 320
GE+ +VKIPAGK CGFVQF R
Sbjct: 259 GEIAYVKIPAGKGCGFVQFGTR 280
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 96/240 (40%), Gaps = 43/240 (17%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVS 124
PDA + S+++GDL P + + + F V G KV+ + T S+GYGF++F
Sbjct: 107 PDAGPE--HSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFAD 164
Query: 125 HAAAERVLQTFNG---------------------------TQMPSTEQNFRLNWATYGAG 157
R + NG ++ + E + + T
Sbjct: 165 ENERNRAMSEMNGXYCSTRPMRISAATPKKPLVFSSNTVXVKVMNNESMYPVPAYTTSVP 224
Query: 158 ERRQD-DGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRF 216
D D + TIFVG+L ++T+ L++TF + + K+ KG GFV+F
Sbjct: 225 VLPADYDANNTTIFVGNLDPNITEEELKQTFLQ-FGEIAYVKIPA------GKGCGFVQF 277
Query: 217 GDESEQLRSMTEMNGVLCSTRPMRI----GPAATKKAAT-GQQYQKATYQNTQGSQGEND 271
G + ++ +M G + + +R PAA + T GQQ + G G D
Sbjct: 278 GTRASAEEAIQKMQGKIIGQQVVRTSWGRNPAAKQDLTTWGQQVDPNQWSAYYGYGGTYD 337
>gi|449455232|ref|XP_004145357.1| PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis
sativus]
Length = 436
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 161/262 (61%), Positives = 195/262 (74%), Gaps = 11/262 (4%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S+D +++LWIGDLQPWM+E+Y+ + F HTGE S KVI NKQT SEGYGF+EF SH A
Sbjct: 95 STDEVKTLWIGDLQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTA 154
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
E+VLQ +NGT MP+TE FRLNWAT+ A +RR D G D +IFVGDLAADVTD +LQETF
Sbjct: 155 EKVLQNYNGTIMPNTELPFRLNWATFSANDRRPDTGSDLSIFVGDLAADVTDAILQETFS 214
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ Y+SVKGAKVV D +G SKGYGF RFGDE+E+ R+MTEMNG+ CS+RPMRIG A KK
Sbjct: 215 SRYTSVKGAKVVIDSNSGPSKGYGF-RFGDENERTRAMTEMNGIYCSSRPMRIGVATPKK 273
Query: 249 AATGQQ-YQKATY---------QNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQY 298
A+ QQ Y QGSQ +++ NNTTIFVGGLD V+D+ LK F ++
Sbjct: 274 ASGYQQGYASQALVLAGGHPNGMAVQGSQSDSESNNTTIFVGGLDSDVSDEDLKQAFSKF 333
Query: 299 GELVHVKIPAGKRCGFVQFANR 320
G++V VKIP GK CGFVQFANR
Sbjct: 334 GDVVSVKIPIGKGCGFVQFANR 355
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 82/201 (40%), Gaps = 35/201 (17%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVS 124
PD SD S+++GDL + ++ + F V G KV+ + + S+GYGF F
Sbjct: 187 PDTGSD--LSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGPSKGYGF-RFGD 243
Query: 125 HAAAERVLQTFNG-----------TQMPSTEQNFRLNWATYGA-------------GERR 160
R + NG P ++ +A+ G +
Sbjct: 244 ENERTRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQGSQS 303
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+ + TIFVG L +DV+D L++ F + + V K+ KG GFV+F +
Sbjct: 304 DSESNNTTIFVGGLDSDVSDEDLKQAF-SKFGDVVSVKIPI------GKGCGFVQFANRK 356
Query: 221 EQLRSMTEMNGVLCSTRPMRI 241
++ +NG + + +R+
Sbjct: 357 NAEDAIQGLNGTVIGKQTVRL 377
>gi|255538402|ref|XP_002510266.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223550967|gb|EEF52453.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 443
Score = 324 bits (831), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 158/250 (63%), Positives = 190/250 (76%), Gaps = 4/250 (1%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++WIGDL WM+E+Y+ + F TGE VS KVIRNKQT SEGYGF+EF +HA AE+VLQ
Sbjct: 109 RTVWIGDLHHWMDENYLHTCFASTGEIVSIKVIRNKQTGLSEGYGFVEFYTHATAEKVLQ 168
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
+ G MP+TEQ FRLNWAT+ G++R D+ PD +IFVGDLAADVTD +L ETF + Y S
Sbjct: 169 NYAGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLHETFVSRYPS 228
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VK AKVV D TGRSKGYGFVRFGD++E+ ++MTEMNGV CS+R MRIG AAT + +TG
Sbjct: 229 VKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMTEMNGVYCSSRAMRIG-AATPRKSTGY 287
Query: 254 QYQKATYQN---TQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
Q+Q N Q Q + D NTTIFVGGLDP+VTD+ LK F QYGE+V VKIP GK
Sbjct: 288 QHQGGYVSNGASGQAFQADGDSTNTTIFVGGLDPNVTDEDLKQPFSQYGEIVSVKIPVGK 347
Query: 311 RCGFVQFANR 320
CGFVQFA+R
Sbjct: 348 GCGFVQFASR 357
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 82/184 (44%), Gaps = 24/184 (13%)
Query: 75 SLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL + +S + F + KV+ + T S+GYGF+ F + +
Sbjct: 203 SIFVGDLAADVTDSLLHETFVSRYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMT 262
Query: 134 TFNG-------------TQMPSTEQNFRLNWATYGA-GERRQDDG--PDFTIFVGDLAAD 177
NG T ST + + + GA G+ Q DG + TIFVG L +
Sbjct: 263 EMNGVYCSSRAMRIGAATPRKSTGYQHQGGYVSNGASGQAFQADGDSTNTTIFVGGLDPN 322
Query: 178 VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTR 237
VTD L++ F + Y + K+ KG GFV+F S ++ ++NG + +
Sbjct: 323 VTDEDLKQPF-SQYGEIVSVKIPV------GKGCGFVQFASRSNAEEALQKLNGTVIGKQ 375
Query: 238 PMRI 241
+R+
Sbjct: 376 TVRL 379
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + + + F GE VS K+ K G GF++F S + AE LQ
Sbjct: 313 TIFVGGLDPNVTDEDLKQPFSQYGEIVSVKIPVGK------GCGFVQFASRSNAEEALQK 366
Query: 135 FNGTQMPSTEQNFRLNW 151
NGT + +Q RL+W
Sbjct: 367 LNGTVI--GKQTVRLSW 381
>gi|359492060|ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Vitis vinifera]
Length = 418
Score = 324 bits (830), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 156/251 (62%), Positives = 192/251 (76%), Gaps = 5/251 (1%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++W+GDL WM+E+Y+ S F TGE S KVIRNKQT SEGYGF+EF SHAAAE+VLQ
Sbjct: 84 RTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKVLQ 143
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
+ G MP+T+Q FRLNWAT+ G++R D+GPD +IFVGDLA+DV+D +L ETF Y S
Sbjct: 144 GYAGVLMPNTDQPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPS 203
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VK AKVV D TGRSKGYGFVRFGDE+E+ ++MTEMNGV CS+RPMRIG AAT + ++G
Sbjct: 204 VKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIG-AATPRKSSGY 262
Query: 254 QYQKATY----QNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAG 309
Q Q +++ N Q + D NTTIFVGGLDP+V+D+ L+ F QYGE+V VKIP G
Sbjct: 263 QQQYSSHGGYASNGASVQSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVG 322
Query: 310 KRCGFVQFANR 320
K CGFVQFANR
Sbjct: 323 KGCGFVQFANR 333
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 30/209 (14%)
Query: 75 SLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL + +S + F G + KV+ + T S+GYGF+ F + +
Sbjct: 178 SIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMT 237
Query: 134 TFNGTQM-----------PSTEQNFRLNWATYGA----GERRQDDGPDF--TIFVGDLAA 176
NG P ++ ++++G G Q DG TIFVG L
Sbjct: 238 EMNGVYCSSRPMRIGAATPRKSSGYQQQYSSHGGYASNGASVQSDGDSMNTTIFVGGLDP 297
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+V+D L++ F + Y + K+ KG GFV+F + + ++ ++NG +
Sbjct: 298 NVSDEDLRQPF-SQYGEIVSVKIPV------GKGCGFVQFANRNNAEDALQKLNGTVIGK 350
Query: 237 RPMRI----GPAATK-KAATGQQYQKATY 260
+ +R+ PA + +A G Q+ A Y
Sbjct: 351 QTVRLSWGRNPANKQMRADFGNQWSGAYY 379
>gi|302794528|ref|XP_002979028.1| hypothetical protein SELMODRAFT_418663 [Selaginella moellendorffii]
gi|302806386|ref|XP_002984943.1| hypothetical protein SELMODRAFT_424039 [Selaginella moellendorffii]
gi|300147529|gb|EFJ14193.1| hypothetical protein SELMODRAFT_424039 [Selaginella moellendorffii]
gi|300153346|gb|EFJ19985.1| hypothetical protein SELMODRAFT_418663 [Selaginella moellendorffii]
Length = 408
Score = 324 bits (830), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 167/269 (62%), Positives = 202/269 (75%), Gaps = 13/269 (4%)
Query: 65 APDASSD--------GIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG 116
+PDAS+ +++LW+GDLQ WM+ESY+ SIF TGE VS K+IRNK + F EG
Sbjct: 3 SPDASAQQWSQQPPIDMKTLWVGDLQYWMDESYLNSIFSSTGELVSAKIIRNKASGFPEG 62
Query: 117 YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
YGF+EF SHA AERVL F GTQMP TEQ FRLNWA +G GERR + GP+ +IFVGDLA
Sbjct: 63 YGFVEFASHACAERVLTAFTGTQMPQTEQLFRLNWAYFGIGERRPEGGPENSIFVGDLAP 122
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
DVTDY+LQETFR Y SV+GAKVVTD TGRSKGYGFVRF D+SE++R+M+EMNG+ CS+
Sbjct: 123 DVTDYMLQETFRTRYPSVRGAKVVTDVATGRSKGYGFVRFADDSERVRAMSEMNGIYCSS 182
Query: 237 RPMRIGPAATKKAA--TGQQYQKATYQNT---QGSQGENDPNNTTIFVGGLDPSVTDDIL 291
RPMRI A KKA + QK T T Q +NDPNNTTIFVGGLDP+V+++ L
Sbjct: 183 RPMRINAATPKKALIPSAPAPQKVTTFATSPLQNVPNDNDPNNTTIFVGGLDPAVSEEEL 242
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQFANR 320
+ FG++GELV+VKIP GK CGFVQF +R
Sbjct: 243 QKTFGEFGELVYVKIPPGKGCGFVQFTHR 271
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 82/202 (40%), Gaps = 33/202 (16%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL P + + + F V G KV+ + T S+GYGF+ F + R +
Sbjct: 114 SIFVGDLAPDVTDYMLQETFRTRYPSVRGAKVVTDVATGRSKGYGFVRFADDSERVRAMS 173
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGP---------------------DFTIFVG 172
NG S + R+N AT P + TIFVG
Sbjct: 174 EMNGIYCSS--RPMRINAATPKKALIPSAPAPQKVTTFATSPLQNVPNDNDPNNTTIFVG 231
Query: 173 DLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGV 232
L V++ LQ+TF G V G KG GFV+F S ++ +++G
Sbjct: 232 GLDPAVSEEELQKTFGEF-----GELVYVKIPPG--KGCGFVQFTHRSCAEEALGKLHGT 284
Query: 233 LCSTRPMRI--GPAATKKAATG 252
+ + +R+ G A K+ G
Sbjct: 285 MIRQQAIRLSWGRTANKQYPAG 306
>gi|75334879|sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding protein RBP47;
Short=Poly(A)-binding protein RBP47; AltName:
Full=RNA-binding protein 47; Short=NplRBP47
gi|9663769|emb|CAC01238.1| RNA Binding Protein 47 [Nicotiana plumbaginifolia]
Length = 428
Score = 323 bits (829), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 157/263 (59%), Positives = 196/263 (74%), Gaps = 10/263 (3%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
+SS+ +++WIGDLQ WM+ESY+ S F GE +S K+IRNKQT SE YGF+EF +HAA
Sbjct: 78 SSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAA 137
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
AE+VLQ++NGT MP+TEQ FRLNWA + GE+R + G DF+IFVGDLA+DVTD +L++TF
Sbjct: 138 AEKVLQSYNGTMMPNTEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTF 197
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
+ Y S+KGAKVV D TG SKGYGFVRFGDESE+ R+MTEMNGV CS+R MRIG A K
Sbjct: 198 ASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPK 257
Query: 248 KAATGQQYQK----------ATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
K + +QY + T GSQ + D +NTTIFVGGLD VTD+ L+ F Q
Sbjct: 258 KPSAHEQYSSQAVILSGGYASNGAATHGSQSDGDSSNTTIFVGGLDSEVTDEELRQSFNQ 317
Query: 298 YGELVHVKIPAGKRCGFVQFANR 320
+GE+V VKIPAGK CGFVQF++R
Sbjct: 318 FGEVVSVKIPAGKGCGFVQFSDR 340
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 32/192 (16%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL + ++ + F + G KV+ + T S+GYGF+ F + R +
Sbjct: 178 SIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMT 237
Query: 134 TFNGT--------------QMPSTEQNFRL-------NWATYGA---GERRQDDGPDFTI 169
NG + PS + + +A+ GA G + D + TI
Sbjct: 238 EMNGVYCSSRAMRIGVATPKKPSAHEQYSSQAVILSGGYASNGAATHGSQSDGDSSNTTI 297
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
FVG L ++VTD L+++F + V K+ KG GFV+F D S ++ ++
Sbjct: 298 FVGGLDSEVTDEELRQSFNQ-FGEVVSVKIPA------GKGCGFVQFSDRSSAQEAIQKL 350
Query: 230 NGVLCSTRPMRI 241
+G + + +R+
Sbjct: 351 SGAIIGKQAVRL 362
>gi|1899188|gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]
Length = 428
Score = 323 bits (828), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 157/263 (59%), Positives = 195/263 (74%), Gaps = 10/263 (3%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
+SS+ +++WIGDLQ WM+ESY+ S F GE +S K+IRNKQT SE YGF+EF +HAA
Sbjct: 78 SSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAA 137
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
AE+VLQ++NGT MP+ EQ FRLNWA + GE+R + G DF+IFVGDLA+DVTD +L++TF
Sbjct: 138 AEKVLQSYNGTMMPNAEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTF 197
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
+ Y S+KGAKVV D TG SKGYGFVRFGDESE+ R+MTEMNGV CS+R MRIG A K
Sbjct: 198 ASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPK 257
Query: 248 KAATGQQYQK----------ATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
K + QQY + T GSQ + D +NTTIFVGGLD VTD+ L+ F Q
Sbjct: 258 KPSAQQQYSSQAVILSGGYASNGAATHGSQSDGDASNTTIFVGGLDSDVTDEELRQSFNQ 317
Query: 298 YGELVHVKIPAGKRCGFVQFANR 320
+GE+V VKIPAGK CGFVQF++R
Sbjct: 318 FGEVVSVKIPAGKGCGFVQFSDR 340
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 36/210 (17%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL + ++ + F + G KV+ + T S+GYGF+ F + R +
Sbjct: 178 SIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMT 237
Query: 134 TFNGT--------------QMPSTEQNFRL-------NWATYGA---GERRQDDGPDFTI 169
NG + PS +Q + +A+ GA G + D + TI
Sbjct: 238 EMNGVYCSSRAMRIGVATPKKPSAQQQYSSQAVILSGGYASNGAATHGSQSDGDASNTTI 297
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
FVG L +DVTD L+++F + V K+ KG GFV+F D S ++ ++
Sbjct: 298 FVGGLDSDVTDEELRQSFNQ-FGEVVSVKIPA------GKGCGFVQFSDRSSAQEAIQKL 350
Query: 230 NGVLCSTRPMRI--GPAATK--KAATGQQY 255
+G + + +R+ G A K +A +G Q+
Sbjct: 351 SGAIIGKQAVRLSWGRTANKQMRADSGSQW 380
>gi|356562301|ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 401
Score = 323 bits (828), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 168/304 (55%), Positives = 206/304 (67%), Gaps = 10/304 (3%)
Query: 21 QQW--MAYQQQSQQQQQQHQTPVPPPVGWTPQPVPPPSQQ--TQPYGVAPDASSDGIRSL 76
QQW M Y + H P P + P P P Q QP + S +++
Sbjct: 19 QQWVPMQYPAAAAMVMPHHMLP---PQHYAPPPYVPYHHQYAAQPQHQHQNGSGGENKTI 75
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFN 136
WIGDL WM+E+Y+ F TGE S KVIRNKQT SEGYGF+EF SHA AE+VLQ +
Sbjct: 76 WIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYA 135
Query: 137 GTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKG 196
G MP+ EQ FRLNWAT+ G++ D+ PD +IFVGDLAADVTD +L ETF +VY SVK
Sbjct: 136 GILMPNAEQPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVYPSVKA 195
Query: 197 AKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ 256
AKVV D TGRSKGYGFVRFGD++E+ ++MT+MNGV CS+RPMRIG AAT + ++G +Q
Sbjct: 196 AKVVFDANTGRSKGYGFVRFGDDNERTQAMTQMNGVYCSSRPMRIG-AATPRKSSG--HQ 252
Query: 257 KATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQ 316
+ N +Q E D NTTIFVGGLDP+V+D+ L+ F QYGE+V VKIP GK CGFVQ
Sbjct: 253 QGGLSNGTANQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQ 312
Query: 317 FANR 320
FANR
Sbjct: 313 FANR 316
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 25/191 (13%)
Query: 67 DASSDGI--RSLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFV 123
D SD + S+++GDL + +S + F V + KV+ + T S+GYGF+ F
Sbjct: 157 DKGSDNVPDLSIFVGDLAADVTDSLLHETFASVYPSVKAAKVVFDANTGRSKGYGFVRFG 216
Query: 124 SHAAAERVLQTFNGTQMPSTEQNFRLNWAT-------------YGAGERRQDDGPDFTIF 170
+ + NG S + R+ AT G + + D + TIF
Sbjct: 217 DDNERTQAMTQMNGVYCSS--RPMRIGAATPRKSSGHQQGGLSNGTANQSEADSTNTTIF 274
Query: 171 VGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMN 230
VG L +V+D L++ F + Y + K+ KG GFV+F + + ++ ++N
Sbjct: 275 VGGLDPNVSDEDLRQPF-SQYGEIVSVKIPV------GKGCGFVQFANRNNAEEALQKLN 327
Query: 231 GVLCSTRPMRI 241
G + +R+
Sbjct: 328 GTTIGKQTVRL 338
Score = 43.9 bits (102), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 11/126 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + + + F GE VS K+ K G GF++F + AE LQ
Sbjct: 272 TIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGK------GCGFVQFANRNNAEEALQK 325
Query: 135 FNGTQMPSTEQNFRLNWATYGAGER-RQDDGPDFT-IFVGDLAADVTDYVLQETFR-AVY 191
NGT + +Q RL+W A ++ R D G +T + G D Y L ++Y
Sbjct: 326 LNGTTI--GKQTVRLSWGRNPANKQFRMDFGSPWTGAYYGAPMYDGYGYALPPRHDPSIY 383
Query: 192 SSVKGA 197
++ GA
Sbjct: 384 AAAYGA 389
>gi|326528543|dbj|BAJ93453.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 416
Score = 323 bits (827), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 157/258 (60%), Positives = 194/258 (75%), Gaps = 10/258 (3%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ W +E+Y+ F HTGE S K+IRNK + EGYGFIEF+SH AAE+VL
Sbjct: 16 VRTLWIGDLQYWADENYLYGCFAHTGEVQSVKLIRNKLSGLPEGYGFIEFISHEAAEKVL 75
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
Q +NG QMP TE FRLNWA++ +GE+R D GPD +IFVGDLA DVTDY+LQETFR YS
Sbjct: 76 QAYNGAQMPGTELTFRLNWASFSSGEKRPDAGPDHSIFVGDLAPDVTDYLLQETFRVNYS 135
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SV+GAKVVTD TGRSKGYGFV+F DE+E+ R+M+EMNGV CSTRPMRI A KK++
Sbjct: 136 SVRGAKVVTDPNTGRSKGYGFVKFADENEKTRAMSEMNGVYCSTRPMRISAAIPKKSSGS 195
Query: 253 Q-QY--QKATYQNT-------QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
Q QY KA Y T Q ++D NTTIF+G LDP+VT++ L+ + Q+GEL+
Sbjct: 196 QLQYGAAKAMYPATAYAIPQAQTVLPDSDLTNTTIFIGNLDPNVTEEELRQICVQFGELI 255
Query: 303 HVKIPAGKRCGFVQFANR 320
+VKIP GK CGFVQ+A+R
Sbjct: 256 YVKIPVGKGCGFVQYASR 273
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 38/203 (18%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVS 124
PDA D S+++GDL P + + + F V G KV+ + T S+GYGF++F
Sbjct: 104 PDAGPD--HSIFVGDLAPDVTDYLLQETFRVNYSSVRGAKVVTDPNTGRSKGYGFVKFAD 161
Query: 125 HAAAERVLQTFNGTQMPSTEQNFRLNWAT----------YGAGERR-------------- 160
R + NG + + R++ A YGA +
Sbjct: 162 ENEKTRAMSEMNGVY--CSTRPMRISAAIPKKSSGSQLQYGAAKAMYPATAYAIPQAQTV 219
Query: 161 --QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGD 218
D + TIF+G+L +VT +E R + V+ +++ + KG GFV++
Sbjct: 220 LPDSDLTNTTIFIGNLDPNVT----EEELRQI--CVQFGELIYVKIP-VGKGCGFVQYAS 272
Query: 219 ESEQLRSMTEMNGVLCSTRPMRI 241
+ ++ ++G + + +R+
Sbjct: 273 RASAEEAVQRLHGTVIGQQVVRL 295
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 64 VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFV 123
V PD+ +++IG+L P + E + I GE + K+ K G GF+++
Sbjct: 219 VLPDSDLTNT-TIFIGNLDPNVTEEELRQICVQFGELIYVKIPVGK------GCGFVQYA 271
Query: 124 SHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQ 161
S A+AE +Q +GT + +Q RL+W A ++ Q
Sbjct: 272 SRASAEEAVQRLHGTVI--GQQVVRLSWGRSPANKQDQ 307
>gi|359492062|ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 409
Score = 323 bits (827), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 155/247 (62%), Positives = 191/247 (77%), Gaps = 6/247 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++W+GDL WM+E+Y+ S F TGE S KVIRNKQT SEGYGF+EF SHAAAE+VLQ
Sbjct: 84 RTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKVLQ 143
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
+ G MP+T+Q FRLNWAT+ G++R D+GPD +IFVGDLA+DV+D +L ETF Y S
Sbjct: 144 GYAGVLMPNTDQPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPS 203
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VK AKVV D TGRSKGYGFVRFGDE+E+ ++MTEMNGV CS+RPMRIG AAT + ++G
Sbjct: 204 VKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIG-AATPRKSSGY 262
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
Q Q +++ Q + D NTTIFVGGLDP+V+D+ L+ F QYGE+V VKIP GK CG
Sbjct: 263 QQQYSSH-----VQSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCG 317
Query: 314 FVQFANR 320
FVQFANR
Sbjct: 318 FVQFANR 324
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 25/202 (12%)
Query: 75 SLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL + +S + F G + KV+ + T S+GYGF+ F + +
Sbjct: 178 SIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMT 237
Query: 134 TFNGTQMPSTEQNFRLNWAT----------YGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG S + R+ AT Y + + D + TIFVG L +V+D L
Sbjct: 238 EMNGVYCSS--RPMRIGAATPRKSSGYQQQYSSHVQSDGDSMNTTIFVGGLDPNVSDEDL 295
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI-- 241
++ F + Y + K+ KG GFV+F + + ++ ++NG + + +R+
Sbjct: 296 RQPF-SQYGEIVSVKIPV------GKGCGFVQFANRNNAEDALQKLNGTVIGKQTVRLSW 348
Query: 242 --GPAATK-KAATGQQYQKATY 260
PA + +A G Q+ A Y
Sbjct: 349 GRNPANKQMRADFGNQWSGAYY 370
>gi|255555523|ref|XP_002518798.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223542179|gb|EEF43723.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 438
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 160/258 (62%), Positives = 192/258 (74%), Gaps = 12/258 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++W+GDL WM+E+Y+ S F HTGE S KVIRNKQT EGYGFIEF SHA AE+VLQ
Sbjct: 106 KTIWVGDLLHWMDETYLHSCFSHTGEVTSVKVIRNKQTGQPEGYGFIEFYSHATAEKVLQ 165
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
+NG+ MP+ +Q FRLNWA++ AGERR + G D +IFVGDLAADVTD +LQETF + Y S
Sbjct: 166 NYNGSMMPNADQPFRLNWASF-AGERRTETGSDLSIFVGDLAADVTDAMLQETFSSKYLS 224
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA-ATG 252
VKGAKVVTD TGRSKGYGFVRFGDE+E+ R+M EMNGV CS+RPMRIG A KK+ A
Sbjct: 225 VKGAKVVTDLNTGRSKGYGFVRFGDENERSRAMMEMNGVYCSSRPMRIGVATPKKSPAYQ 284
Query: 253 QQYQKATY----------QNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
QQY QGSQ + D NNTTIFVGG+D ++D+ L+ F Q+GE+V
Sbjct: 285 QQYSSQALVLAGGHAPNGSMAQGSQSDGDSNNTTIFVGGIDSDISDEDLRQPFSQFGEVV 344
Query: 303 HVKIPAGKRCGFVQFANR 320
VKIPAGK CGFVQFA+R
Sbjct: 345 SVKIPAGKGCGFVQFADR 362
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 78/195 (40%), Gaps = 37/195 (18%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL + ++ + F V G KV+ + T S+GYGF+ F R +
Sbjct: 199 SIFVGDLAADVTDAMLQETFSSKYLSVKGAKVVTDLNTGRSKGYGFVRFGDENERSRAMM 258
Query: 134 TFNGTQMPSTEQNFRLNWAT---------------------------YGAGERRQDDGPD 166
NG S + R+ AT G + D +
Sbjct: 259 EMNGVYCSS--RPMRIGVATPKKSPAYQQQYSSQALVLAGGHAPNGSMAQGSQSDGDSNN 316
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
TIFVG + +D++D L++ F + + V K+ KG GFV+F D ++
Sbjct: 317 TTIFVGGIDSDISDEDLRQPF-SQFGEVVSVKIPA------GKGCGFVQFADRKSAEDAL 369
Query: 227 TEMNGVLCSTRPMRI 241
+NG + +R+
Sbjct: 370 QSLNGTTIGKQTVRL 384
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G + + + + F GE VS K+ K G GF++F +AE LQ+
Sbjct: 318 TIFVGGIDSDISDEDLRQPFSQFGEVVSVKIPAGK------GCGFVQFADRKSAEDALQS 371
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDD 163
NGT + +Q RL+W A ++ + D
Sbjct: 372 LNGTTI--GKQTVRLSWGRSPANKQWRGD 398
>gi|2708532|gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]
Length = 482
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 157/263 (59%), Positives = 195/263 (74%), Gaps = 10/263 (3%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
+SS+ +++WIGDLQ WM+ESY+ S F GE +S K+IRNKQT SE YGF+EF +HAA
Sbjct: 132 SSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAA 191
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
AE+VLQ++NGT MP+ EQ FRLNWA + GE+R + G DF+IFVGDLA+DVTD +L++TF
Sbjct: 192 AEKVLQSYNGTMMPNAEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTF 251
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
+ Y S+KGAKVV D TG SKGYGFVRFGDESE+ R+MTEMNGV CS+R MRIG A K
Sbjct: 252 ASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPK 311
Query: 248 KAATGQQYQK----------ATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
K + QQY + T GSQ + D +NTTIFVGGLD VTD+ L+ F Q
Sbjct: 312 KPSAQQQYSSQAVILSGGYASNGAATHGSQSDGDASNTTIFVGGLDSDVTDEELRQSFNQ 371
Query: 298 YGELVHVKIPAGKRCGFVQFANR 320
+GE+V VKIPAGK CGFVQF++R
Sbjct: 372 FGEVVSVKIPAGKGCGFVQFSDR 394
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 87/192 (45%), Gaps = 32/192 (16%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL + ++ + F + G KV+ + T S+GYGF+ F + R +
Sbjct: 232 SIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMT 291
Query: 134 TFNGT--------------QMPSTEQNFRL-------NWATYGA---GERRQDDGPDFTI 169
NG + PS +Q + +A+ GA G + D + TI
Sbjct: 292 EMNGVYCSSRAMRIGVATPKKPSAQQQYSSQAVILSGGYASNGAATHGSQSDGDASNTTI 351
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
FVG L +DVTD L+++F + V K+ KG GFV+F D S ++ ++
Sbjct: 352 FVGGLDSDVTDEELRQSFNQ-FGEVVSVKIPA------GKGCGFVQFSDRSSAQEAIQKL 404
Query: 230 NGVLCSTRPMRI 241
+G + + +R+
Sbjct: 405 SGAIIGKQAVRL 416
>gi|356510359|ref|XP_003523906.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 409
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 170/299 (56%), Positives = 203/299 (67%), Gaps = 5/299 (1%)
Query: 23 WMAYQQQSQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPD-ASSDGIRSLWIGDL 81
WM Q + QH +PP PQP Q Q A SS +++W+GDL
Sbjct: 29 WMPMQYPAAAMVMQHHM-MPPQHYAPPQPYMAYHQYQQQVPQAHHLGSSAENKTVWVGDL 87
Query: 82 QPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMP 141
WM+E+Y+ F TGE S KVIRNKQT SEGYGF+EF SH A++VLQ + G MP
Sbjct: 88 HHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHGTADKVLQNYAGILMP 147
Query: 142 STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVT 201
+TEQ FRLNWAT+ G++R D+ PD +IFVGDLAADVTD +L ETF Y SVK AKVV
Sbjct: 148 NTEQPFRLNWATFSTGDKRSDNVPDLSIFVGDLAADVTDSMLHETFTNRYPSVKAAKVVF 207
Query: 202 DRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQ 261
D TGRSKGYGFVRFGD++E+ ++MTEMNGV CS+RPMRIG AAT + +G YQ+ +
Sbjct: 208 DANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIG-AATPRKTSG--YQQGSQS 264
Query: 262 NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
N SQ E D NTTIFVGGLDP+VT + LK F QYGE+V VKIP GK CGFVQFANR
Sbjct: 265 NGTSSQSEADSTNTTIFVGGLDPNVTAEDLKQPFSQYGEIVSVKIPVGKGCGFVQFANR 323
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 25/191 (13%)
Query: 67 DASSDGI--RSLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFV 123
D SD + S+++GDL + +S + F + V + KV+ + T S+GYGF+ F
Sbjct: 164 DKRSDNVPDLSIFVGDLAADVTDSMLHETFTNRYPSVKAAKVVFDANTGRSKGYGFVRFG 223
Query: 124 SHAAAERVLQTFNGTQMPSTEQNFRLNWAT-------------YGAGERRQDDGPDFTIF 170
+ + NG S + R+ AT G + + D + TIF
Sbjct: 224 DDNERSQAMTEMNGVYCSS--RPMRIGAATPRKTSGYQQGSQSNGTSSQSEADSTNTTIF 281
Query: 171 VGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMN 230
VG L +VT L++ F + Y + K+ KG GFV+F + + ++ ++N
Sbjct: 282 VGGLDPNVTAEDLKQPF-SQYGEIVSVKIPV------GKGCGFVQFANRNNAEEALQKLN 334
Query: 231 GVLCSTRPMRI 241
G + +R+
Sbjct: 335 GTTIGKQMVRL 345
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 9/117 (7%)
Query: 48 TPQPVPPPSQQTQPYGVAPDASSDGIRS-LWIGDLQPWMEESYIASIFGHTGEFVSGKVI 106
TP+ Q +Q G + + +D + +++G L P + + F GE VS K+
Sbjct: 251 TPRKTSGYQQGSQSNGTSSQSEADSTNTTIFVGGLDPNVTAEDLKQPFSQYGEIVSVKIP 310
Query: 107 RNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDD 163
K G GF++F + AE LQ NGT + +Q RL+W A ++ + D
Sbjct: 311 VGK------GCGFVQFANRNNAEEALQKLNGTTI--GKQMVRLSWGRSPANKQFRAD 359
>gi|224105517|ref|XP_002313840.1| predicted protein [Populus trichocarpa]
gi|222850248|gb|EEE87795.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 158/263 (60%), Positives = 196/263 (74%), Gaps = 12/263 (4%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S++ +++W+GDL WM+E+Y+ + F HTGE S K+IRNKQT EGYGF+EF SHAAA
Sbjct: 75 SNEEAKTVWVGDLLHWMDETYLHNCFSHTGEVSSVKIIRNKQTGQLEGYGFVEFYSHAAA 134
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
E+VLQ+++G+ MP+T+Q FRLNWA++ AGERR D G D +IFVGDLAADVTD +LQETF
Sbjct: 135 EKVLQSYSGSMMPNTDQPFRLNWASF-AGERRADAGSDLSIFVGDLAADVTDAMLQETFA 193
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
Y+SVKGAKVV D TGRSKGYGFVRFGDE+E+ R++TEMNG CS+RPMRIG A KK
Sbjct: 194 TKYASVKGAKVVADSNTGRSKGYGFVRFGDENEKTRAITEMNGAYCSSRPMRIGVATPKK 253
Query: 249 -AATGQQY----------QKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+A QQY + QGSQ + D NNTTIFVGG+D VTD+ L+ F Q
Sbjct: 254 PSAYQQQYSSQALVLAGGHASNGTMAQGSQSDGDSNNTTIFVGGIDSDVTDEDLRQPFSQ 313
Query: 298 YGELVHVKIPAGKRCGFVQFANR 320
+GE+V VK+P GK C FVQFANR
Sbjct: 314 FGEVVSVKMPTGKGCAFVQFANR 336
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 81/201 (40%), Gaps = 35/201 (17%)
Query: 67 DASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSH 125
DA SD S+++GDL + ++ + F V G KV+ + T S+GYGF+ F
Sbjct: 167 DAGSD--LSIFVGDLAADVTDAMLQETFATKYASVKGAKVVADSNTGRSKGYGFVRFGDE 224
Query: 126 AAAERVLQTFNGTQMPS--------------------TEQNFRL-----NWATYGAGERR 160
R + NG S + Q L + T G +
Sbjct: 225 NEKTRAITEMNGAYCSSRPMRIGVATPKKPSAYQQQYSSQALVLAGGHASNGTMAQGSQS 284
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
D + TIFVG + +DVTD L++ F S G V TG KG FV+F +
Sbjct: 285 DGDSNNTTIFVGGIDSDVTDEDLRQPF-----SQFGEVVSVKMPTG--KGCAFVQFANRK 337
Query: 221 EQLRSMTEMNGVLCSTRPMRI 241
++ +NG + +R+
Sbjct: 338 NAEDALQSLNGTTIGKQTVRL 358
>gi|357454295|ref|XP_003597428.1| RNA-binding protein [Medicago truncatula]
gi|355486476|gb|AES67679.1| RNA-binding protein [Medicago truncatula]
Length = 428
Score = 319 bits (818), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 163/272 (59%), Positives = 191/272 (70%), Gaps = 20/272 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
AS + +R+LWIGDLQ W++E+Y+ F HTGE +S K+IRNK T EGYGFIEFVSH+A
Sbjct: 9 ASLEEVRTLWIGDLQYWVDENYLTHCFSHTGEVISIKIIRNKITGQPEGYGFIEFVSHSA 68
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
AERVLQT+NGTQMP TEQ FRLNWA++G GERR D GPD +IFVGDLA DVTDY+LQETF
Sbjct: 69 AERVLQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPDHSIFVGDLAPDVTDYLLQETF 128
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
R Y SV+GAKVVTD TGRSKGYGFV+F DESE+ R+M+EMNGV CSTRPMRI AAT
Sbjct: 129 RTHYGSVRGAKVVTDPNTGRSKGYGFVKFSDESERNRAMSEMNGVYCSTRPMRIS-AATP 187
Query: 248 KAATGQQYQKATYQNTQGSQG-------------------ENDPNNTTIFVGGLDPSVTD 288
K TG Q E D NNTTI+VG LD +V++
Sbjct: 188 KKTTGYQQNPYAAVVAAAPVPKAIYPVPAYTTAPVNTVPPEYDVNNTTIYVGNLDLNVSE 247
Query: 289 DILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
+ LK F Q+GE+V VK+ GK CGFVQF R
Sbjct: 248 EELKQNFLQFGEIVSVKVHPGKACGFVQFGAR 279
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Query: 53 PPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTN 112
P P+ T P P ++++G+L + E + F GE VS KV K
Sbjct: 213 PVPAYTTAPVNTVPPEYDVNNTTIYVGNLDLNVSEEELKQNFLQFGEIVSVKVHPGKAC- 271
Query: 113 FSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNW 151
GF++F + A+AE +Q G + +Q R++W
Sbjct: 272 -----GFVQFGARASAEEAIQKMQGKIL--GQQVIRVSW 303
>gi|302795494|ref|XP_002979510.1| hypothetical protein SELMODRAFT_111082 [Selaginella moellendorffii]
gi|300152758|gb|EFJ19399.1| hypothetical protein SELMODRAFT_111082 [Selaginella moellendorffii]
Length = 432
Score = 319 bits (818), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 157/267 (58%), Positives = 189/267 (70%), Gaps = 19/267 (7%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ WM+E+Y+ ++F HTGE +S KVIRNKQT + EGYGFIEF SH AAERVL
Sbjct: 27 VRTLWIGDLQYWMDENYLRNLFAHTGEVLSAKVIRNKQTGYPEGYGFIEFNSHPAAERVL 86
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
+NGTQMP TEQ FRLNWA++G GE+R D GP+ +IFVGDLA DVTDY+L ETFR +
Sbjct: 87 LAYNGTQMPQTEQAFRLNWASFGMGEKRMDGGPELSIFVGDLAPDVTDYMLHETFRTRFP 146
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA-AT 251
SV+GAKVV D TGRSKGYGFVRF DE+E+ R+M+EMNGV CS+RPMRI A KKA A
Sbjct: 147 SVRGAKVVIDAVTGRSKGYGFVRFADENERARAMSEMNGVYCSSRPMRISAATPKKAMAA 206
Query: 252 GQQYQKATYQNTQGSQG------------------ENDPNNTTIFVGGLDPSVTDDILKT 293
G A Q + ++DP NTTIFVGGLD ++T++ +K
Sbjct: 207 GLTTVTAATIVPQPTIASPITPPPSLSIQSQVLPPDSDPTNTTIFVGGLDLNITEEEVKQ 266
Query: 294 VFGQYGELVHVKIPAGKRCGFVQFANR 320
F GELV VKIP GK C FVQ+A R
Sbjct: 267 TFSHIGELVSVKIPPGKGCAFVQYAQR 293
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 39 TPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTG 98
T VP P +P PPPS Q + PD+ ++++G L + E + F H G
Sbjct: 215 TIVPQPTIASPI-TPPPSLSIQSQVLPPDSDPTNT-TIFVGGLDLNITEEEVKQTFSHIG 272
Query: 99 EFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNW 151
E VS K+ K G F+++ +AE LQ +GT + +Q RL+W
Sbjct: 273 ELVSVKIPPGK------GCAFVQYAQRNSAEDALQRLHGTVI--GQQAIRLSW 317
>gi|224067280|ref|XP_002302445.1| predicted protein [Populus trichocarpa]
gi|222844171|gb|EEE81718.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 157/257 (61%), Positives = 193/257 (75%), Gaps = 4/257 (1%)
Query: 67 DASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHA 126
+ SS +++ IGDL WM+E+Y+ + F TGE S KVIR+KQT SEGYGF+EF +HA
Sbjct: 89 EGSSGDNKTICIGDLHHWMDENYLHTCFASTGEIASIKVIRSKQTGLSEGYGFVEFFTHA 148
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQET 186
AE+VLQ + G MP+TEQ FRLNWAT+ G++R D+ PD +IFVGDLAADVTD +LQET
Sbjct: 149 TAEKVLQNYGGILMPNTEQPFRLNWATFSTGDKRSDNTPDLSIFVGDLAADVTDSLLQET 208
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
F + Y SVK AKVV D TGRSKGYGFVRFGD++E+ ++MTEMNGV CS+RPMRIG AAT
Sbjct: 209 FASKYQSVKSAKVVFDANTGRSKGYGFVRFGDDTERTQAMTEMNGVYCSSRPMRIG-AAT 267
Query: 247 KKAATGQQYQKATYQN---TQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVH 303
+ ++G Q Q N +QG Q + D +N TIFVGGLDP+VTD+ LK F QYGE+V
Sbjct: 268 PRKSSGYQQQGGYGSNGASSQGFQSDGDSSNATIFVGGLDPNVTDEDLKQPFSQYGEIVS 327
Query: 304 VKIPAGKRCGFVQFANR 320
VKIP K CGFVQFANR
Sbjct: 328 VKIPVSKGCGFVQFANR 344
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 28/186 (15%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL + +S + F + V S KV+ + T S+GYGF+ F + +
Sbjct: 190 SIFVGDLAADVTDSLLQETFASKYQSVKSAKVVFDANTGRSKGYGFVRFGDDTERTQAMT 249
Query: 134 TFNGTQMPSTEQNFRLNWAT------------YGA------GERRQDDGPDFTIFVGDLA 175
NG S + R+ AT YG+ G + D + TIFVG L
Sbjct: 250 EMNGVYCSS--RPMRIGAATPRKSSGYQQQGGYGSNGASSQGFQSDGDSSNATIFVGGLD 307
Query: 176 ADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCS 235
+VTD L++ F + Y + K+ SKG GFV+F + + ++ ++NG +
Sbjct: 308 PNVTDEDLKQPF-SQYGEIVSVKIPV------SKGCGFVQFANRNNAEEALQKLNGTVIG 360
Query: 236 TRPMRI 241
+ +R+
Sbjct: 361 KQTVRL 366
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 11/86 (12%)
Query: 70 SDGIRS---LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHA 126
SDG S +++G L P + + + F GE VS K+ S+G GF++F +
Sbjct: 292 SDGDSSNATIFVGGLDPNVTDEDLKQPFSQYGEIVSVKIP------VSKGCGFVQFANRN 345
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWA 152
AE LQ NGT + +Q RL+W
Sbjct: 346 NAEEALQKLNGTVI--GKQTVRLSWG 369
>gi|356552180|ref|XP_003544447.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 425
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 153/247 (61%), Positives = 189/247 (76%), Gaps = 3/247 (1%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++WIGDL WM+E+Y+ F TGE S KVIRNKQT SEGYGF+EF SHA AE+VLQ
Sbjct: 97 KTIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQ 156
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
+ G MP+TEQ FRLNWAT+ G++ D+ PD +IFVGDLAADVTD +L ETF +VY S
Sbjct: 157 NYAGILMPNTEQPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVYPS 216
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VK AKVV D TGRSKGYGFVRFGD++++ ++MT+MNGV CS+RPMRIG AAT + ++G
Sbjct: 217 VKAAKVVFDANTGRSKGYGFVRFGDDNQRTQAMTQMNGVYCSSRPMRIG-AATPRKSSG- 274
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
+Q+ N +Q E D NTTIFVGGLDP+V+D+ L+ F QYGE+V VKIP GK CG
Sbjct: 275 -HQQGGQSNGTANQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCG 333
Query: 314 FVQFANR 320
FVQFANR
Sbjct: 334 FVQFANR 340
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 25/191 (13%)
Query: 67 DASSDGI--RSLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFV 123
D SD + S+++GDL + +S + F V + KV+ + T S+GYGF+ F
Sbjct: 181 DKGSDNVPDLSIFVGDLAADVTDSLLHETFASVYPSVKAAKVVFDANTGRSKGYGFVRFG 240
Query: 124 SHAAAERVLQTFNGTQMPSTEQNFRLNWAT-------------YGAGERRQDDGPDFTIF 170
+ + NG S + R+ AT G + + D + TIF
Sbjct: 241 DDNQRTQAMTQMNGVYCSS--RPMRIGAATPRKSSGHQQGGQSNGTANQSEADSTNTTIF 298
Query: 171 VGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMN 230
VG L +V+D L++ F + Y + K+ KG GFV+F + + ++ ++N
Sbjct: 299 VGGLDPNVSDEDLRQPF-SQYGEIVSVKIPV------GKGCGFVQFANRNNAEEALQKLN 351
Query: 231 GVLCSTRPMRI 241
G + +R+
Sbjct: 352 GTSIGKQTVRL 362
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 12/145 (8%)
Query: 57 QQTQPYGVAPDASSDGIRS-LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSE 115
Q Q G A + +D + +++G L P + + + F GE VS K+ K
Sbjct: 277 QGGQSNGTANQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGK------ 330
Query: 116 GYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGER-RQDDGPDFT-IFVGD 173
G GF++F + AE LQ NGT + +Q RL+W A ++ R D G +T + G
Sbjct: 331 GCGFVQFANRNNAEEALQKLNGTSI--GKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGA 388
Query: 174 LAADVTDYVLQETFR-AVYSSVKGA 197
D Y L ++Y++ GA
Sbjct: 389 PMYDGYGYALTPRHDPSIYAAAYGA 413
>gi|224123466|ref|XP_002330321.1| predicted protein [Populus trichocarpa]
gi|222871356|gb|EEF08487.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 159/263 (60%), Positives = 193/263 (73%), Gaps = 12/263 (4%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S++ +++W+GDL WM+E+Y+ + F HTGE S K+IRNKQT EGYGF+EF S AAA
Sbjct: 60 SNEEAKTIWVGDLLHWMDEAYLHNCFSHTGEVSSVKIIRNKQTGQLEGYGFVEFYSRAAA 119
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
E+VLQ+++G+ MP+TEQ FRLNWA++ AGERR D G D +IFVGDLAADVTD +LQETF
Sbjct: 120 EKVLQSYSGSMMPNTEQPFRLNWASF-AGERRADPGSDLSIFVGDLAADVTDSMLQETFA 178
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
Y SVKGAKVV D TGRSKGYGFVRFGDE+E+ R+M EMNG CS+RPMRIG A KK
Sbjct: 179 GKYPSVKGAKVVIDSNTGRSKGYGFVRFGDENEKTRAMMEMNGAFCSSRPMRIGVATPKK 238
Query: 249 -AATGQQY----------QKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+A QQY + QGSQ + D NNTTIFVGG+D VTD+ L+ F Q
Sbjct: 239 PSAYQQQYSSQALVLAGGHASNGAMAQGSQSDGDSNNTTIFVGGIDSDVTDEDLRQPFSQ 298
Query: 298 YGELVHVKIPAGKRCGFVQFANR 320
+GE+V VKIP GK C FVQFANR
Sbjct: 299 FGEVVSVKIPVGKGCAFVQFANR 321
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 79/193 (40%), Gaps = 33/193 (17%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL + +S + F V G KV+ + T S+GYGF+ F R +
Sbjct: 158 SIFVGDLAADVTDSMLQETFAGKYPSVKGAKVVIDSNTGRSKGYGFVRFGDENEKTRAMM 217
Query: 134 TFNGT--------------QMPSTEQN--------FRLNWATYGA---GERRQDDGPDFT 168
NG + PS Q A+ GA G + D + T
Sbjct: 218 EMNGAFCSSRPMRIGVATPKKPSAYQQQYSSQALVLAGGHASNGAMAQGSQSDGDSNNTT 277
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE 228
IFVG + +DVTD L++ F + + V K+ KG FV+F + ++
Sbjct: 278 IFVGGIDSDVTDEDLRQPF-SQFGEVVSVKIPV------GKGCAFVQFANRKNAEDALQS 330
Query: 229 MNGVLCSTRPMRI 241
+NG + +R+
Sbjct: 331 LNGTTIGKQTVRL 343
>gi|226492692|ref|NP_001144988.1| uncharacterized protein LOC100278143 [Zea mays]
gi|195649537|gb|ACG44236.1| hypothetical protein [Zea mays]
Length = 436
Score = 316 bits (810), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 162/297 (54%), Positives = 206/297 (69%), Gaps = 15/297 (5%)
Query: 34 QQQHQTPVPP---PVGWTP-QPVPPPSQQTQPYGVAPDASS------DGIRSLWIGDLQP 83
Q H P PP P + P V PP Q+ P VA + + + +S+W+GDL
Sbjct: 56 QPHHMAPPPPQFAPTHFVPFHAVAPPRAQSVPAAVALGSPAPHQPGQEENKSVWVGDLHY 115
Query: 84 WMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPST 143
WM+E+Y+ S FG+TGE V+ KVIRNKQT SEGYGF+EF SHAAAE+VL+ F+G MP+T
Sbjct: 116 WMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEGFSGHIMPNT 175
Query: 144 EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDR 203
+Q FRLNWA++ G+RR D D +IFVGDLA+DV D L E F + YSSVKGAKVV D
Sbjct: 176 DQPFRLNWASFSMGDRRSDAASDHSIFVGDLASDVNDATLLEAFSSRYSSVKGAKVVIDA 235
Query: 204 TTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNT 263
TGRSKGYGFVRFGD+SE+ ++MTEMNGV CS+RPMRIGPA +K++ + ++
Sbjct: 236 NTGRSKGYGFVRFGDDSEKTQAMTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSAARSD 295
Query: 264 QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
G D NTT+FVGGLDP+V+++ L+ F QYGE+ VKIP GK+CGFVQFA R
Sbjct: 296 GG-----DLTNTTVFVGGLDPNVSEEDLRQTFSQYGEISSVKIPIGKQCGFVQFAQR 347
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + E + F GE S K+ KQ GF++F AE LQ
Sbjct: 303 TVFVGGLDPNVSEEDLRQTFSQYGEISSVKIPIGKQC------GFVQFAQRKNAEDALQG 356
Query: 135 FNGTQMPSTEQNFRLNWATYGAGER-RQDDG 164
NG+ + +QN RL+W A ++ R D+G
Sbjct: 357 LNGSTI--GKQNVRLSWGRNPANKQFRGDNG 385
>gi|357475467|ref|XP_003608019.1| RNA Binding Protein [Medicago truncatula]
gi|355509074|gb|AES90216.1| RNA Binding Protein [Medicago truncatula]
Length = 454
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 156/265 (58%), Positives = 191/265 (72%), Gaps = 17/265 (6%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
IR++W+GDL WM+E+++ + F HTGE S KVIRNKQT SEGYGF+EF + A AE+VL
Sbjct: 115 IRTIWLGDLHHWMDETFLHNCFAHTGEVASAKVIRNKQTGQSEGYGFVEFYTRAMAEKVL 174
Query: 133 QTFNGTQMPSTEQNFRLNWATY----GAGERRQDDG-PDFTIFVGDLAADVTDYVLQETF 187
Q FNGT MP+T+Q FRLNWAT+ G GERR + D ++FVGDLA DVTD +LQETF
Sbjct: 175 QNFNGTMMPNTDQAFRLNWATFSAAGGGGERRSSEATSDLSVFVGDLAIDVTDAMLQETF 234
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
+ +SS+KGAKVV D TGRSKGYGFVRFGDESE+ R+MTEMNGV CS+RPMR+G A K
Sbjct: 235 ASKFSSIKGAKVVIDSNTGRSKGYGFVRFGDESERTRAMTEMNGVYCSSRPMRVGVATPK 294
Query: 248 KA-ATGQQYQK--------ATYQN---TQGSQGENDPNNTTIFVGGLDPSVTDDILKTVF 295
K QQY + N QGSQ E D NNTTIFVGGLD ++D+ L+ F
Sbjct: 295 KTYGNPQQYSSQAVVLAGGGGHSNGAMAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPF 354
Query: 296 GQYGELVHVKIPAGKRCGFVQFANR 320
Q+G+++ VKIP GK CGFVQ A+R
Sbjct: 355 LQFGDVISVKIPVGKGCGFVQLADR 379
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 40/206 (19%)
Query: 65 APDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFV 123
+ +A+SD S+++GDL + ++ + F + G KV+ + T S+GYGF+ F
Sbjct: 207 SSEATSD--LSVFVGDLAIDVTDAMLQETFASKFSSIKGAKVVIDSNTGRSKGYGFVRFG 264
Query: 124 SHAAAERVLQTFNGTQMPSTEQNFRLNWAT----YGA----------------------- 156
+ R + NG S + R+ AT YG
Sbjct: 265 DESERTRAMTEMNGVYCSS--RPMRVGVATPKKTYGNPQQYSSQAVVLAGGGGHSNGAMA 322
Query: 157 -GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVR 215
G + + D + TIFVG L +D++D L++ F + V K+ KG GFV+
Sbjct: 323 QGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQ-FGDVISVKIPV------GKGCGFVQ 375
Query: 216 FGDESEQLRSMTEMNGVLCSTRPMRI 241
D ++ +NG + + +R+
Sbjct: 376 LADRKNAEEAIQGLNGTVIGKQTVRL 401
>gi|388505308|gb|AFK40720.1| unknown [Medicago truncatula]
Length = 454
Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 156/265 (58%), Positives = 191/265 (72%), Gaps = 17/265 (6%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
IR++W+GDL WM+E+++ + F HTGE S KVIRNKQT SEGYGF+EF + A AE+VL
Sbjct: 115 IRTIWLGDLHHWMDETFLHNCFAHTGEVASAKVIRNKQTGQSEGYGFVEFYTRAMAEKVL 174
Query: 133 QTFNGTQMPSTEQNFRLNWATY----GAGERRQDDG-PDFTIFVGDLAADVTDYVLQETF 187
Q FNGT MP+T+Q FRLNWAT+ G GERR + D ++FVGDLA DVTD +LQETF
Sbjct: 175 QNFNGTMMPNTDQAFRLNWATFSAAGGGGERRSSEATSDLSVFVGDLAIDVTDAMLQETF 234
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
+ +SS+KGAKVV D TGRSKGYGFVRFGDESE+ R+MTEMNGV CS+RPMR+G A K
Sbjct: 235 ASKFSSIKGAKVVIDSNTGRSKGYGFVRFGDESERTRAMTEMNGVYCSSRPMRVGVATPK 294
Query: 248 KA-ATGQQYQK--------ATYQN---TQGSQGENDPNNTTIFVGGLDPSVTDDILKTVF 295
K QQY + N QGSQ E D NNTTIFVGGLD ++D+ L+ F
Sbjct: 295 KTYGNPQQYSSQAVVLAGGGGHSNGAMAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPF 354
Query: 296 GQYGELVHVKIPAGKRCGFVQFANR 320
Q+G+++ VKIP GK CGFVQ A+R
Sbjct: 355 LQFGDVISVKIPVGKGCGFVQLADR 379
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 40/206 (19%)
Query: 65 APDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFV 123
+ +A+SD S+++GDL + ++ + F + G KV+ + T S+GYGF+ F
Sbjct: 207 SSEATSD--LSVFVGDLAIDVTDAMLQETFASKFSSIKGAKVVIDSNTGRSKGYGFVRFG 264
Query: 124 SHAAAERVLQTFNGTQMPSTEQNFRLNWAT----YGA----------------------- 156
+ R + NG S + R+ AT YG
Sbjct: 265 DESERTRAMTEMNGVYCSS--RPMRVGVATPKKTYGNPQQYSSQAVVLAGGGGHSNGAMA 322
Query: 157 -GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVR 215
G + + D + TIFVG L +D++D L++ F + V K+ KG GFV+
Sbjct: 323 QGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQ-FGDVISVKIPV------GKGCGFVQ 375
Query: 216 FGDESEQLRSMTEMNGVLCSTRPMRI 241
D ++ +NG + + +R+
Sbjct: 376 LADRKNAEEAIQGLNGTVIGKQTVRL 401
>gi|388494114|gb|AFK35123.1| unknown [Medicago truncatula]
Length = 425
Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 155/247 (62%), Positives = 181/247 (73%), Gaps = 3/247 (1%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++LWIGDL WM+ESY+ F TGE S KVIRNK + SEGYGF EF SHA AE+VLQ
Sbjct: 97 KTLWIGDLHSWMDESYLHRCFASTGEITSVKVIRNKHSGISEGYGFAEFFSHATAEKVLQ 156
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
+ G MP+ +Q FRLNWAT+ G++ D+ D +IFVGDLAADVTD VL ETF + Y S
Sbjct: 157 NYAGILMPNADQAFRLNWATFSTGDKGSDNVTDLSIFVGDLAADVTDSVLHETFSSSYPS 216
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VK AKVV D TGRSKGYGFVRFGDESE+ ++MT+MNGV CS+RPMRIG AAT + ++G
Sbjct: 217 VKAAKVVYDANTGRSKGYGFVRFGDESERSQAMTQMNGVYCSSRPMRIG-AATPRKSSGH 275
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
Q T N SQ E D NTTIFVGGLD +VTD+ LK F QYGE+ VKIP GK CG
Sbjct: 276 QPGGQT--NGTSSQSEADSTNTTIFVGGLDSNVTDEDLKQTFSQYGEIASVKIPVGKGCG 333
Query: 314 FVQFANR 320
FVQFANR
Sbjct: 334 FVQFANR 340
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 25/191 (13%)
Query: 67 DASSDGIR--SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFV 123
D SD + S+++GDL + +S + F + V + KV+ + T S+GYGF+ F
Sbjct: 181 DKGSDNVTDLSIFVGDLAADVTDSVLHETFSSSYPSVKAAKVVYDANTGRSKGYGFVRFG 240
Query: 124 SHAAAERVLQTFNGTQMPSTEQNFRLNWAT-------------YGAGERRQDDGPDFTIF 170
+ + + NG S + R+ AT G + + D + TIF
Sbjct: 241 DESERSQAMTQMNGVYCSS--RPMRIGAATPRKSSGHQPGGQTNGTSSQSEADSTNTTIF 298
Query: 171 VGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMN 230
VG L ++VTD L++TF + Y + K+ KG GFV+F + + ++ ++N
Sbjct: 299 VGGLDSNVTDEDLKQTF-SQYGEIASVKIPV------GKGCGFVQFANRNNAEEALQKLN 351
Query: 231 GVLCSTRPMRI 241
G + + +R+
Sbjct: 352 GTMIGKQTVRL 362
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L + + + F GE S K+ K G GF++F + AE LQ
Sbjct: 296 TIFVGGLDSNVTDEDLKQTFSQYGEIASVKIPVGK------GCGFVQFANRNNAEEALQK 349
Query: 135 FNGTQMPSTEQNFRLNW 151
NGT + +Q RL+W
Sbjct: 350 LNGTMI--GKQTVRLSW 364
>gi|302792090|ref|XP_002977811.1| hypothetical protein SELMODRAFT_232989 [Selaginella moellendorffii]
gi|300154514|gb|EFJ21149.1| hypothetical protein SELMODRAFT_232989 [Selaginella moellendorffii]
Length = 455
Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 160/285 (56%), Positives = 191/285 (67%), Gaps = 37/285 (12%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ WM+E+Y+ ++F HTGE +S KVIRNKQT + EGYGFIEF SH AAERVL
Sbjct: 27 VRTLWIGDLQYWMDENYLRNLFAHTGEVLSAKVIRNKQTGYPEGYGFIEFNSHPAAERVL 86
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
+NGTQMP TEQ FRLNWA++G GE+R D GP+ +IFVGDLA DVTDY+L ETFR +
Sbjct: 87 LAYNGTQMPQTEQAFRLNWASFGMGEKRMDGGPELSIFVGDLAPDVTDYMLHETFRTRFP 146
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA-AT 251
SV+GAKVV D TGRSKGYGFVRF DE+E+ R+M+EMNGV CS+RPMRI A KKA A
Sbjct: 147 SVRGAKVVIDAVTGRSKGYGFVRFADENERARAMSEMNGVYCSSRPMRISAATPKKAMAA 206
Query: 252 GQQYQKAT---------------------------YQNT---------QGSQGENDPNNT 275
G A Y T Q ++DP NT
Sbjct: 207 GLTTVTAATIVPQPTIASPFKAATTTTTPTYQTMPYSITPPPSLSIQSQVLPPDSDPTNT 266
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
TIFVGGLD ++T++ +K F Q GELV VKIP GK C FVQ+A R
Sbjct: 267 TIFVGGLDLNITEEEVKQTFSQIGELVSVKIPPGKGCAFVQYAQR 311
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 53 PPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTN 112
PPPS Q + PD+ ++++G L + E + F GE VS K+ K
Sbjct: 246 PPPSLSIQSQVLPPDSDPTNT-TIFVGGLDLNITEEEVKQTFSQIGELVSVKIPPGK--- 301
Query: 113 FSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNW 151
G F+++ +AE LQ +GT + +Q RL+W
Sbjct: 302 ---GCAFVQYAQRNSAEDALQRLHGTVI--GQQAIRLSW 335
>gi|116788528|gb|ABK24911.1| unknown [Picea sitchensis]
Length = 397
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 156/263 (59%), Positives = 192/263 (73%), Gaps = 11/263 (4%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAA 127
S D I++LW+GDLQ WM+E+Y+ + F GE V S K+IRNKQT EGYGF+E S A+
Sbjct: 46 SGDEIKTLWVGDLQYWMDENYLQTCFSSNGEVVVSVKIIRNKQTGQPEGYGFVELDSRAS 105
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
AER+LQT +GT MP++ FRLNWAT+GAG+RR + G ++IFVGDL +V D +LQETF
Sbjct: 106 AERILQTLHGTPMPNSPHPFRLNWATFGAGDRRTEPGTGYSIFVGDLGPEVIDILLQETF 165
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
++ YSSVK AKVV D TGR+KGYGFVRFGDE+E+ R+MTEMNGV C +RPMRI A K
Sbjct: 166 QSRYSSVKSAKVVIDANTGRTKGYGFVRFGDENEKNRAMTEMNGVYCCSRPMRINEATPK 225
Query: 248 KAATGQQ-------YQKATYQNT---QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
K+ QQ Y Y QG Q +NDPNNTTIFVGGLDP+ TD+ L+ VFG
Sbjct: 226 KSLGLQQSYSMKGNYYTQAYGGAVAGQGFQSDNDPNNTTIFVGGLDPNATDEDLRQVFGP 285
Query: 298 YGELVHVKIPAGKRCGFVQFANR 320
+GE+V+VKIP GK CGFVQF NR
Sbjct: 286 FGEIVYVKIPVGKGCGFVQFTNR 308
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 40/213 (18%)
Query: 75 SLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL P + + + F S KV+ + T ++GYGF+ F R +
Sbjct: 146 SIFVGDLGPEVIDILLQETFQSRYSSVKSAKVVIDANTGRTKGYGFVRFGDENEKNRAMT 205
Query: 134 TFNGTQMPSTEQNFRLNWAT--------------------------YGAGERRQDDGPDF 167
NG S + R+N AT G G + +D +
Sbjct: 206 EMNGVYCCS--RPMRINEATPKKSLGLQQSYSMKGNYYTQAYGGAVAGQGFQSDNDPNNT 263
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
TIFVG L + TD L++ F + + K+ KG GFV+F + S ++
Sbjct: 264 TIFVGGLDPNATDEDLRQVF-GPFGEIVYVKIPV------GKGCGFVQFTNRSSAEEALQ 316
Query: 228 EMNGVLCSTRPMRI----GPAATKKAATGQQYQ 256
+++G + + +R+ PA + A+ G Q Q
Sbjct: 317 KLHGTIIGQQSIRLSWGRSPANKQTASWGVQPQ 349
>gi|82621116|gb|ABB86246.1| DNA-binding protein-like [Solanum tuberosum]
Length = 423
Score = 310 bits (793), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 168/323 (52%), Positives = 204/323 (63%), Gaps = 31/323 (9%)
Query: 17 QQQHQQWMAYQQQSQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPY--------GVAPDA 68
Q QQWMA QQ PP Q QQ PY
Sbjct: 26 QHYQQQWMAMQQ------------YPPAAAMVMQQQMMYGQQYMPYYHQQQQHMIQIQQN 73
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S+ R++WIGDLQ WM+E Y+ + F GE +S KVIRNKQT SE YGFIEF +H AA
Sbjct: 74 GSEDNRTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEAA 133
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD------DGPDFTIFVGDLAADVTDYV 182
E+VLQ++NGT MP+ EQ FRLNW+ + GE+R D G D +IFVGDLA+DVTD +
Sbjct: 134 EKVLQSYNGTMMPNAEQPFRLNWSAFSTGEKRADVGAAAGSGSDLSIFVGDLASDVTDTM 193
Query: 183 LQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
L++TF + Y SVKGAKVV D TGRSKGYGFVRF DESE+ R+MTEMNG+ CS+R MRIG
Sbjct: 194 LRDTFSSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRAMTEMNGIYCSSRAMRIG 253
Query: 243 PAATKKAATGQQY-----QKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
A KK + QQY + TQ SQ ++D +NTT+FVGGLD VTD+ L+ F Q
Sbjct: 254 VATPKKPSAMQQYSSQGGHASNGAATQTSQTDSDLSNTTVFVGGLDSDVTDEELRQSFSQ 313
Query: 298 YGELVHVKIPAGKRCGFVQFANR 320
+G +V VKIPAGK CGFVQF+ R
Sbjct: 314 FGNVVSVKIPAGKGCGFVQFSER 336
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 29/199 (14%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIE 121
G A + SD S+++GDL + ++ + F V G KV+ + T S+GYGF+
Sbjct: 169 GAAAGSGSD--LSIFVGDLASDVTDTMLRDTFSSRYPSVKGAKVVIDSNTGRSKGYGFVR 226
Query: 122 FVSHAAAERVLQTFNGT--------------QMPSTEQNFRL--NWATYGAGERRQDDGP 165
F + R + NG + PS Q + A+ GA +
Sbjct: 227 FDDESERSRAMTEMNGIYCSSRAMRIGVATPKKPSAMQQYSSQGGHASNGAATQTSQTDS 286
Query: 166 DF---TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
D T+FVG L +DVTD L+++F + + +V K+ KG GFV+F + S
Sbjct: 287 DLSNTTVFVGGLDSDVTDEELRQSF-SQFGNVVSVKIPA------GKGCGFVQFSERSAA 339
Query: 223 LRSMTEMNGVLCSTRPMRI 241
++ ++NG + T+ +R+
Sbjct: 340 EDAIEKLNGTVIGTQTVRL 358
>gi|194707750|gb|ACF87959.1| unknown [Zea mays]
gi|414885794|tpg|DAA61808.1| TPA: hypothetical protein ZEAMMB73_995180 [Zea mays]
Length = 433
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/247 (59%), Positives = 187/247 (75%), Gaps = 5/247 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+S+W+GDL WM+E+Y+ S FG+TGE V+ KVIRNKQT SEGYGF+EF SHAAAE+VL+
Sbjct: 103 KSVWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLE 162
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F+G MP+T+Q FRLNWA++ G+RR D D +IFVGDLA+DV D L E F + YSS
Sbjct: 163 GFSGHIMPNTDQPFRLNWASFSMGDRRSDSASDHSIFVGDLASDVNDATLLEAFSSRYSS 222
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKVV D TGRSKGYGFVRFGD+SE+ ++MTEMNGV CS+RPMRIGPA +K++
Sbjct: 223 VKGAKVVIDANTGRSKGYGFVRFGDDSEKTQAMTEMNGVYCSSRPMRIGPATPRKSSGTS 282
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
+ ++ G D NTT+FVGGLDP+V+++ L+ F QYGE+ VKIP GK+CG
Sbjct: 283 GSNGSAARSDGG-----DLTNTTVFVGGLDPNVSEEDLRQTFSQYGEISSVKIPIGKQCG 337
Query: 314 FVQFANR 320
FVQFA R
Sbjct: 338 FVQFAQR 344
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + E + F GE S K+ KQ GF++F AE LQ
Sbjct: 300 TVFVGGLDPNVSEEDLRQTFSQYGEISSVKIPIGKQC------GFVQFAQRKNAEDALQG 353
Query: 135 FNGTQMPSTEQNFRLNWATYGAGER-RQDDG 164
NG+ + +QN RL+W A ++ R D+G
Sbjct: 354 LNGSTI--GKQNVRLSWGRNPANKQFRGDNG 382
>gi|356550323|ref|XP_003543537.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 410
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 160/261 (61%), Positives = 189/261 (72%), Gaps = 14/261 (5%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ W++E Y++ FGHTGE +S K+IRNK T EGYGF+EFVSHAAAERVL
Sbjct: 13 VRTLWIGDLQYWVDEGYLSHCFGHTGEVISIKIIRNKLTGQPEGYGFVEFVSHAAAERVL 72
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT+NGTQMP+T+Q FRLNWA++G GERR D P+ +IFVGDLA DVTDY+LQETFRA Y
Sbjct: 73 QTYNGTQMPATDQTFRLNWASFGIGERRPDAAPEHSIFVGDLAPDVTDYLLQETFRAHYP 132
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SV+GAKVVTD T RSKGYGFV+F DE+E+ R+MTEMNGV CSTRPMRI AAT K TG
Sbjct: 133 SVRGAKVVTDPNTARSKGYGFVKFSDENERNRAMTEMNGVYCSTRPMRIS-AATPKKTTG 191
Query: 253 QQYQKA-------------TYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
A T Q + D NNTTIFVG LD +V+++ LK Q+G
Sbjct: 192 AYAAPAAPVPKPVYPVPAYTSPVVQVQPPDYDVNNTTIFVGNLDLNVSEEELKQNSLQFG 251
Query: 300 ELVHVKIPAGKRCGFVQFANR 320
E+V VKI GK GFVQF R
Sbjct: 252 EIVSVKIQPGKGFGFVQFGTR 272
>gi|212722984|ref|NP_001132004.1| uncharacterized protein LOC100193409 [Zea mays]
gi|194693170|gb|ACF80669.1| unknown [Zea mays]
Length = 422
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 156/288 (54%), Positives = 196/288 (68%), Gaps = 19/288 (6%)
Query: 33 QQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIAS 92
Q Q PVP V +P P A + +++W+GDL WM+E+Y+ +
Sbjct: 65 QSPQLAAPVPAVVLGSPAP--------------HQAGQEENKTIWVGDLHFWMDENYLHN 110
Query: 93 IFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWA 152
FG+TGE V+ KVIRNKQT SEGYGF+EF SHAAAERVL+ F+G MP+T+Q FRLNWA
Sbjct: 111 CFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAERVLEGFSGHIMPNTDQPFRLNWA 170
Query: 153 TYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYG 212
++ G+RR D D +IFVGDLA+DV D L E F + YSSVKGAKVV D TGRSKGYG
Sbjct: 171 SFSMGDRRSDVASDHSIFVGDLASDVNDATLLEVFSSRYSSVKGAKVVIDANTGRSKGYG 230
Query: 213 FVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDP 272
FVRFGD+SE+ +MTEMNGV CS+RPMRIGPA +K++ ++ + G D
Sbjct: 231 FVRFGDDSEKTHAMTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSSARPDGG-----DL 285
Query: 273 NNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
NTT+FVGGLDP V+++ L+ F QYGE+ VKIP GK+CGFVQFA R
Sbjct: 286 TNTTVFVGGLDPDVSEEDLRQAFSQYGEISSVKIPVGKQCGFVQFAQR 333
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
PD ++++G L P + E + F GE S K+ KQ GF++F
Sbjct: 280 PDGGDLTNTTVFVGGLDPDVSEEDLRQAFSQYGEISSVKIPVGKQC------GFVQFAQR 333
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNW 151
AE LQ NG+ + +Q RL+W
Sbjct: 334 KNAEDALQGLNGSTI--GKQAVRLSW 357
>gi|356550321|ref|XP_003543536.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 419
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 160/261 (61%), Positives = 189/261 (72%), Gaps = 14/261 (5%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ W++E Y++ FGHTGE +S K+IRNK T EGYGF+EFVSHAAAERVL
Sbjct: 13 VRTLWIGDLQYWVDEGYLSHCFGHTGEVISIKIIRNKLTGQPEGYGFVEFVSHAAAERVL 72
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT+NGTQMP+T+Q FRLNWA++G GERR D P+ +IFVGDLA DVTDY+LQETFRA Y
Sbjct: 73 QTYNGTQMPATDQTFRLNWASFGIGERRPDAAPEHSIFVGDLAPDVTDYLLQETFRAHYP 132
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SV+GAKVVTD T RSKGYGFV+F DE+E+ R+MTEMNGV CSTRPMRI AAT K TG
Sbjct: 133 SVRGAKVVTDPNTARSKGYGFVKFSDENERNRAMTEMNGVYCSTRPMRIS-AATPKKTTG 191
Query: 253 QQYQKA-------------TYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
A T Q + D NNTTIFVG LD +V+++ LK Q+G
Sbjct: 192 AYAAPAAPVPKPVYPVPAYTSPVVQVQPPDYDVNNTTIFVGNLDLNVSEEELKQNSLQFG 251
Query: 300 ELVHVKIPAGKRCGFVQFANR 320
E+V VKI GK GFVQF R
Sbjct: 252 EIVSVKIQPGKGFGFVQFGTR 272
>gi|357465449|ref|XP_003603009.1| RNA-binding protein [Medicago truncatula]
gi|355492057|gb|AES73260.1| RNA-binding protein [Medicago truncatula]
Length = 420
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 169/341 (49%), Positives = 211/341 (61%), Gaps = 39/341 (11%)
Query: 7 SQPSDQTSQYQQQHQQWMAYQQQSQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYG--- 63
S+P++Q+S + Q Q++ H PPP W P PP + P+
Sbjct: 9 SKPTEQSSNNRPQ--------QKTPPPPSPHSLTFPPPQQWVPMQYPP-AAMVMPHHMLP 59
Query: 64 -----------------------VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEF 100
V +S+ ++LW+GDL WM+E+Y+ F TGE
Sbjct: 60 PQHYPPPPHHYMAYHHYLHHVPHVHHGSSAADNKTLWVGDLHHWMDENYLHRCFASTGEI 119
Query: 101 VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGE-R 159
S KVIRNKQT +EGYGF+EF SH AE+VLQT+ G MP+TEQ FRLNWAT+ G+ +
Sbjct: 120 FSIKVIRNKQTCQTEGYGFVEFTSHGTAEKVLQTYAGMLMPNTEQPFRLNWATFSTGDHK 179
Query: 160 RQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDE 219
R D+ PD +IFVGDLAADVTD +L ETF Y SVK AKVV D TGRSKGYGFVRFGD+
Sbjct: 180 RSDNVPDLSIFVGDLAADVTDTMLLETFSDKYPSVKAAKVVFDANTGRSKGYGFVRFGDD 239
Query: 220 SEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFV 279
E+ +++ EMNGV CS+R MRIG AAT + ++G YQ+ N SQ + D NTTIFV
Sbjct: 240 GERSKALNEMNGVFCSSRAMRIG-AATPRKSSG--YQQGGQSNGTPSQSDTDSTNTTIFV 296
Query: 280 GGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
GGLDPS T + L+ F QYGE+V VKIP GK CGFVQFANR
Sbjct: 297 GGLDPSATAEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANR 337
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 74/179 (41%), Gaps = 19/179 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL + ++ + F V + KV+ + T S+GYGF+ F + L
Sbjct: 188 SIFVGDLAADVTDTMLLETFSDKYPSVKAAKVVFDANTGRSKGYGFVRFGDDGERSKALN 247
Query: 134 TFNGT-----------QMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYV 182
NG P ++ + G + D + TIFVG L T
Sbjct: 248 EMNGVFCSSRAMRIGAATPRKSSGYQQGGQSNGTPSQSDTDSTNTTIFVGGLDPSATAED 307
Query: 183 LQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
L++ F + Y + K+ KG GFV+F + + ++ ++NG + +R+
Sbjct: 308 LRQPF-SQYGEIVSVKIPV------GKGCGFVQFANRNNAEEALQKLNGTTVGKQTVRL 359
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + F GE VS K+ K G GF++F + AE LQ
Sbjct: 293 TIFVGGLDPSATAEDLRQPFSQYGEIVSVKIPVGK------GCGFVQFANRNNAEEALQK 346
Query: 135 FNGTQMPSTEQNFRLNW 151
NGT + +Q RL+W
Sbjct: 347 LNGTTV--GKQTVRLSW 361
>gi|326495566|dbj|BAJ85879.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 479
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 147/247 (59%), Positives = 185/247 (74%), Gaps = 6/247 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++W+GDL WM+E+Y+ + FG+TGE V+ KVIRNKQT SEGYGF+EF SHAAAE+VL
Sbjct: 153 KTIWVGDLHYWMDENYLHTCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLD 212
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F G MP+T+Q FR+NWA++ G+RR D D +IFVGDLA+DV D L ETF + YSS
Sbjct: 213 GFAGHIMPNTDQPFRINWASFSMGDRRSDIASDHSIFVGDLASDVNDTALLETFSSRYSS 272
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKVV D TGRSKGYGFVRFGD+SE+ +MTEMNGV CSTRPMRIGPA +K++
Sbjct: 273 VKGAKVVIDANTGRSKGYGFVRFGDDSEKTNAMTEMNGVYCSTRPMRIGPATPRKSSGTS 332
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
++ ++ + D NTT+FVGGLDP+V++D LK F QYGE+ VKIP GK+CG
Sbjct: 333 GSTGSS------ARSDGDLTNTTVFVGGLDPNVSEDDLKQTFSQYGEISSVKIPVGKQCG 386
Query: 314 FVQFANR 320
FVQF R
Sbjct: 387 FVQFLQR 393
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 68 ASSDGI---RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVS 124
A SDG ++++G L P + E + F GE S K+ KQ GF++F+
Sbjct: 339 ARSDGDLTNTTVFVGGLDPNVSEDDLKQTFSQYGEISSVKIPVGKQC------GFVQFLQ 392
Query: 125 HAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGER-RQDDG 164
AE LQ NG+ + +Q RL+W A ++ R D+G
Sbjct: 393 RKNAEDALQGLNGSTI--GKQTVRLSWGRNPANKQLRSDNG 431
>gi|297807995|ref|XP_002871881.1| hypothetical protein ARALYDRAFT_488820 [Arabidopsis lyrata subsp.
lyrata]
gi|297317718|gb|EFH48140.1| hypothetical protein ARALYDRAFT_488820 [Arabidopsis lyrata subsp.
lyrata]
Length = 426
Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 157/263 (59%), Positives = 188/263 (71%), Gaps = 16/263 (6%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ W++E+Y+ S F TGE VS KVIRNK T EGYGFIEF+SHAAAER L
Sbjct: 22 VRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTL 81
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT+NGTQMP TE FRLNWA++G+G++ D GPD +IFVGDLA DVTDY+LQETFR YS
Sbjct: 82 QTYNGTQMPGTELTFRLNWASFGSGQKV-DAGPDHSIFVGDLAPDVTDYLLQETFRVHYS 140
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK-AAT 251
SV+GAKVVTD +TGRSKGYGFV+F +ESE+ R+M EMNG+ CSTRPMRI A KK
Sbjct: 141 SVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMRISAATPKKNVGV 200
Query: 252 GQQY--------------QKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
QQY Q Q QG E+D TTI + LDP+VT++ LK F Q
Sbjct: 201 QQQYVTKGPVPSAVAAPVQAYIAQPGQGLPPESDVTCTTISIANLDPNVTEEELKKAFSQ 260
Query: 298 YGELVHVKIPAGKRCGFVQFANR 320
GE+++VKIPA K G+VQF R
Sbjct: 261 LGEIIYVKIPATKGYGYVQFKTR 283
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 13/121 (10%)
Query: 32 QQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIA 91
QQQ + PVP V P + QP P S ++ I +L P + E +
Sbjct: 201 QQQYVTKGPVPSAVA-----APVQAYIAQPGQGLPPESDVTCTTISIANLDPNVTEEELK 255
Query: 92 SIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNW 151
F GE + K+ K GYG+++F + +AE +Q G + +Q R++W
Sbjct: 256 KAFSQLGEIIYVKIPATK------GYGYVQFKTRPSAEEAVQKMQGQVI--GQQAVRISW 307
Query: 152 A 152
+
Sbjct: 308 S 308
>gi|215765810|dbj|BAG87507.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 345
Score = 306 bits (784), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 146/247 (59%), Positives = 183/247 (74%), Gaps = 6/247 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++W+GDL WM+E+Y+ S FG+TGE V+ KVIRNKQT SEGYGF+EF SHAAAE+VL+
Sbjct: 19 KTIWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLE 78
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F G MP+T+Q FR+NWA++ G+RR D D +IFVGDLA+DV D L ETF YSS
Sbjct: 79 GFAGHIMPNTDQPFRINWASFSMGDRRSDIASDHSIFVGDLASDVNDTTLLETFSKRYSS 138
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKVV D TGRSKGYGFVRFGD++E+ +MTEMNGV CSTRPMRIGPA +K +
Sbjct: 139 VKGAKVVIDANTGRSKGYGFVRFGDDNEKTHAMTEMNGVYCSTRPMRIGPATPRKTS--- 195
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
+ ++ + D NTT+FVGGLDP+V++D L+ F QYGE+ VKIP GK+CG
Sbjct: 196 ---GTSGPTGSAARSDGDLTNTTVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCG 252
Query: 314 FVQFANR 320
FVQF R
Sbjct: 253 FVQFVQR 259
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + E + F GE S K+ KQ GF++FV AE LQ
Sbjct: 215 TVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQC------GFVQFVQRKNAEDALQG 268
Query: 135 FNGTQMPSTEQNFRLNWATYGAGER-RQDDG 164
NG+ + +Q RL+W A ++ R D+G
Sbjct: 269 LNGSTI--GKQTVRLSWGRNPANKQLRSDNG 297
>gi|356519168|ref|XP_003528246.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 410
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 152/252 (60%), Positives = 182/252 (72%), Gaps = 3/252 (1%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
SS +++W+GDL WM+E+Y+ F GE S KVIRNKQT SEGYGF+EF SH A
Sbjct: 73 SSAENKTVWVGDLHHWMDENYLHRCFASNGEISSIKVIRNKQTGLSEGYGFVEFYSHGTA 132
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
E+VLQ + G MP+TEQ FRLNWAT+G G++R D+ PD +IFVGDLAADVTD +L ETF
Sbjct: 133 EKVLQNYAGILMPNTEQPFRLNWATFGTGDKRSDNVPDLSIFVGDLAADVTDSMLHETFS 192
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
Y SVK AKVV D TGRSKGYGFVRFGD+ E+ ++MTEMNGV CS+RPMRIG AAT +
Sbjct: 193 NRYPSVKAAKVVFDANTGRSKGYGFVRFGDDDERSQAMTEMNGVYCSSRPMRIG-AATPR 251
Query: 249 AATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA 308
+G YQ+ + N SQ E D NTTIFVGGLD +VT + LK F QYGE+V VKIP
Sbjct: 252 KTSG--YQQGSQSNGISSQSEADSTNTTIFVGGLDSNVTAEDLKQPFSQYGEIVSVKIPV 309
Query: 309 GKRCGFVQFANR 320
GK CGF +R
Sbjct: 310 GKGCGFTICNSR 321
>gi|115479619|ref|NP_001063403.1| Os09g0462700 [Oryza sativa Japonica Group]
gi|113631636|dbj|BAF25317.1| Os09g0462700, partial [Oryza sativa Japonica Group]
Length = 441
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 146/247 (59%), Positives = 183/247 (74%), Gaps = 6/247 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++W+GDL WM+E+Y+ S FG+TGE V+ KVIRNKQT SEGYGF+EF SHAAAE+VL+
Sbjct: 115 KTIWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLE 174
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F G MP+T+Q FR+NWA++ G+RR D D +IFVGDLA+DV D L ETF YSS
Sbjct: 175 GFAGHIMPNTDQPFRINWASFSMGDRRSDIASDHSIFVGDLASDVNDTTLLETFSKRYSS 234
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKVV D TGRSKGYGFVRFGD++E+ +MTEMNGV CSTRPMRIGPA +K +
Sbjct: 235 VKGAKVVIDANTGRSKGYGFVRFGDDNEKTHAMTEMNGVYCSTRPMRIGPATPRKTS--- 291
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
+ ++ + D NTT+FVGGLDP+V++D L+ F QYGE+ VKIP GK+CG
Sbjct: 292 ---GTSGPTGSAARSDGDLTNTTVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCG 348
Query: 314 FVQFANR 320
FVQF R
Sbjct: 349 FVQFVQR 355
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + E + F GE S K+ KQ GF++FV AE LQ
Sbjct: 311 TVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQC------GFVQFVQRKNAEDALQG 364
Query: 135 FNGTQMPSTEQNFRLNWATYGAGER-RQDDG 164
NG+ + +Q RL+W A ++ R D+G
Sbjct: 365 LNGSTI--GKQTVRLSWGRNPANKQLRSDNG 393
>gi|357158812|ref|XP_003578248.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 431
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 146/247 (59%), Positives = 184/247 (74%), Gaps = 6/247 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++W+GDL WM+E+Y+ S FG+TGE V+ KVIRNKQT SEGYGF+EF SHAAAE+VL
Sbjct: 104 KTIWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLD 163
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F G MP+T+Q FR+NWA++ G+RR D D +IFVGDLA+DV D L E F + YSS
Sbjct: 164 GFAGHIMPNTDQPFRINWASFSMGDRRSDIASDHSIFVGDLASDVNDATLLEIFSSRYSS 223
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKVV D TGRSKGYGFVRFGD+SE+ +MTEMNGV CSTRPMRIGPA +K++
Sbjct: 224 VKGAKVVIDANTGRSKGYGFVRFGDDSEKTHAMTEMNGVYCSTRPMRIGPATPRKSSGNS 283
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
++ ++ + D NTT+FVGGLDP+V++D L+ F QYGE+ VKIP GK+CG
Sbjct: 284 GSTGSS------ARSDGDLTNTTVFVGGLDPNVSEDDLRQSFSQYGEISSVKIPVGKQCG 337
Query: 314 FVQFANR 320
FVQF R
Sbjct: 338 FVQFLQR 344
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + E + F GE S K+ KQ GF++F+ AE LQ
Sbjct: 300 TVFVGGLDPNVSEDDLRQSFSQYGEISSVKIPVGKQC------GFVQFLQRKNAEDALQG 353
Query: 135 FNGTQMPSTEQNFRLNWATYGAGER-RQDDG 164
NG+ + +Q RL+W A ++ R D+G
Sbjct: 354 LNGSTI--GKQTVRLSWGRNPANKQLRSDNG 382
>gi|297846966|ref|XP_002891364.1| ATRBP47C [Arabidopsis lyrata subsp. lyrata]
gi|297337206|gb|EFH67623.1| ATRBP47C [Arabidopsis lyrata subsp. lyrata]
Length = 443
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 152/258 (58%), Positives = 186/258 (72%), Gaps = 5/258 (1%)
Query: 67 DASSDGIRSLWIGDLQPWMEESYIASIFGHTG---EFVSGKVIRNKQTNFSEGYGFIEFV 123
+AS+ +++W+GDL WM+E+Y+ S F + VS KVIRNK SEGYGF+EF
Sbjct: 101 NASNGENKTIWVGDLHHWMDETYLNSSFASADGEIQIVSVKVIRNKHNGLSEGYGFVEFD 160
Query: 124 SHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR-QDDGPDFTIFVGDLAADVTDYV 182
SH A++VLQ FNGT MP TEQ FRLNWA++ GE+R +++GPD +IFVGDLA DV+D +
Sbjct: 161 SHDVADKVLQEFNGTTMPDTEQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDTL 220
Query: 183 LQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
L ETF Y SVK AKVV D TGRSKGYGFVRFGDE+E+ ++MTEMNGV CS+R MRIG
Sbjct: 221 LHETFSEKYPSVKAAKVVIDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIG 280
Query: 243 PAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
PA +K TG Q Q N ++ E D NTTIFVGGLD SVTDD L+ F ++GE+V
Sbjct: 281 PATPRK-TTGYQQQGGYMPNGALTRPEGDTLNTTIFVGGLDSSVTDDDLRQPFSEFGEIV 339
Query: 303 HVKIPAGKRCGFVQFANR 320
VKIP GK CGFVQF NR
Sbjct: 340 SVKIPVGKGCGFVQFVNR 357
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL P + ++ + F V + KV+ + T S+GYGF+ F + +
Sbjct: 206 SIFVGDLAPDVSDTLLHETFSEKYPSVKAAKVVIDANTGRSKGYGFVRFGDENERTKAMT 265
Query: 134 TFNGTQMPSTEQNFRLNWAT---------------YGAGERRQDDGPDFTIFVGDLAADV 178
NG + S + R+ AT GA R + D + TIFVG L + V
Sbjct: 266 EMNGVKCSS--RAMRIGPATPRKTTGYQQQGGYMPNGALTRPEGDTLNTTIFVGGLDSSV 323
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
TD L++ F + + + K+ KG GFV+F + ++ ++NG + +
Sbjct: 324 TDDDLRQPF-SEFGEIVSVKIPV------GKGCGFVQFVNRPSAEEALEKLNGTVIGKQT 376
Query: 239 MRI 241
+R+
Sbjct: 377 VRL 379
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L + + + F GE VS K+ K G GF++FV+ +AE L+
Sbjct: 313 TIFVGGLDSSVTDDDLRQPFSEFGEIVSVKIPVGK------GCGFVQFVNRPSAEEALEK 366
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQD 162
NGT + +Q RL+W A ++ +D
Sbjct: 367 LNGTVI--GKQTVRLSWGRNQANKQPRD 392
>gi|414589689|tpg|DAA40260.1| TPA: hypothetical protein ZEAMMB73_589753 [Zea mays]
Length = 424
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 147/247 (59%), Positives = 185/247 (74%), Gaps = 5/247 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++W+GDL WM+E+Y+ + FG+TGE V+ KVIRNKQT SEGYGF+EF SHAAAERVL+
Sbjct: 92 KTIWVGDLHFWMDENYLHNCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAERVLE 151
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F+G MP+T+Q FRLNWA++ G+RR D D +IFVGDLA+DV D L E F + YSS
Sbjct: 152 GFSGHIMPNTDQPFRLNWASFSMGDRRSDVASDHSIFVGDLASDVNDATLLEVFSSRYSS 211
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKVV D TGRSKGYGFVRFGD+SE+ +MTEMNGV CS+RPMRIGPA +K++
Sbjct: 212 VKGAKVVIDANTGRSKGYGFVRFGDDSEKTHAMTEMNGVYCSSRPMRIGPATPRKSSGTS 271
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
++ + G D NTT+FVGGLDP V+++ L+ F QYGE+ VKIP GK+CG
Sbjct: 272 GSNGSSARPDGG-----DLTNTTVFVGGLDPDVSEEDLRQAFSQYGEISSVKIPVGKQCG 326
Query: 314 FVQFANR 320
FVQFA R
Sbjct: 327 FVQFAQR 333
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
PD ++++G L P + E + F GE S K+ KQ GF++F
Sbjct: 280 PDGGDLTNTTVFVGGLDPDVSEEDLRQAFSQYGEISSVKIPVGKQC------GFVQFAQR 333
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGER-RQDDG 164
AE LQ NG+ + +Q RL+W A ++ R D+G
Sbjct: 334 KNAEDALQGLNGSTI--GKQAVRLSWGRNPANKQFRGDNG 371
>gi|350536139|ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum]
gi|40804404|gb|AAR91698.1| DNA-binding protein [Solanum lycopersicum]
Length = 428
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 155/270 (57%), Positives = 192/270 (71%), Gaps = 17/270 (6%)
Query: 67 DASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHA 126
+AS D R++WIGDLQ WM+E Y+ + F GE +S KVIRNKQT SE YGFIEF +H
Sbjct: 73 NASEDN-RTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHE 131
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD------DGPDFTIFVGDLAADVTD 180
AAE+VLQ++NGT MP+ EQ FRLNW+ + +GE+R D G D +IFVGDLA+DVTD
Sbjct: 132 AAEKVLQSYNGTMMPNAEQPFRLNWSAFSSGEKRADVGAGAGSGSDLSIFVGDLASDVTD 191
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
+L++TF + Y SVKGAKVV D TGRSKGYGFVRF DESE+ R+MTEMNG+ CS+R MR
Sbjct: 192 TMLRDTFSSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRAMTEMNGIYCSSRAMR 251
Query: 241 IGPAATKKAATGQQY----------QKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDI 290
IG A KK + QQY + TQ SQ ++D +NTT+FVGGLD VTD+
Sbjct: 252 IGVATPKKPSPMQQYFPQAVILAGGHASNGAATQTSQTDSDLSNTTVFVGGLDSEVTDEE 311
Query: 291 LKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
L+ F Q+G +V VKIPAGK CGFVQF+ R
Sbjct: 312 LRQSFSQFGNVVSVKIPAGKGCGFVQFSER 341
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 32/203 (15%)
Query: 64 VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEF 122
V A S S+++GDL + ++ + F V G KV+ + T S+GYGF+ F
Sbjct: 168 VGAGAGSGSDLSIFVGDLASDVTDTMLRDTFSSRYPSVKGAKVVIDSNTGRSKGYGFVRF 227
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRL---------------------NWATYGAGERRQ 161
+ R + NG S + A+ GA +
Sbjct: 228 DDESERSRAMTEMNGIYCSSRAMRIGVATPKKPSPMQQYFPQAVILAGGHASNGAATQTS 287
Query: 162 DDGPDF---TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGD 218
D T+FVG L ++VTD L+++F + + +V K+ KG GFV+F +
Sbjct: 288 QTDSDLSNTTVFVGGLDSEVTDEELRQSF-SQFGNVVSVKIPA------GKGCGFVQFSE 340
Query: 219 ESEQLRSMTEMNGVLCSTRPMRI 241
S ++ ++NG + + +R+
Sbjct: 341 RSAAEDAIEKLNGTVIGAQTVRL 363
>gi|414886904|tpg|DAA62918.1| TPA: hypothetical protein ZEAMMB73_604225 [Zea mays]
Length = 484
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 152/264 (57%), Positives = 186/264 (70%), Gaps = 6/264 (2%)
Query: 61 PYGVAPDASSDGIRSLWIGDLQPWMEESYIA-SIFGHTGE-FVSGKVIRNKQTNFSEGYG 118
PYG P S +R+LWIGDLQ WM+E+Y+ + F + S K+IRNKQT SEGYG
Sbjct: 103 PYGTTP--GSGEVRTLWIGDLQHWMDENYLHYNAFAAVAQQIASVKIIRNKQTGHSEGYG 160
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADV 178
FIEF S AAAE L FNG MP+ E F+LNWA+ G++R D G D TIFVGDLA DV
Sbjct: 161 FIEFYSRAAAEHTLMNFNGQMMPNVEMTFKLNWASASTGDKRGDSGSDRTIFVGDLAHDV 220
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
TD +L++ FRA Y SV+GA VV DR TG KG+GFVRFGD +EQ R+MTEMNG+L STR
Sbjct: 221 TDSMLEDVFRAKYPSVRGANVVVDRMTGWPKGFGFVRFGDLNEQARAMTEMNGMLLSTRQ 280
Query: 239 MRIGPAATKKAATGQQ--YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFG 296
MRIG AA KK QQ YQ+++G+ ENDPNNTT+FVGGLD +V ++ L+ +F
Sbjct: 281 MRIGAAANKKNRDAQQTYATDGAYQSSKGNSSENDPNNTTVFVGGLDSNVNEEYLRQIFT 340
Query: 297 QYGELVHVKIPAGKRCGFVQFANR 320
YGE+ +VKIP GK CGFVQF +R
Sbjct: 341 PYGEISYVKIPVGKHCGFVQFTSR 364
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L + E Y+ IF GE K+ K GF++F S + AE ++
Sbjct: 320 TVFVGGLDSNVNEEYLRQIFTPYGEISYVKIPVGKHC------GFVQFTSRSCAEEAIRM 373
Query: 135 FNGTQMPSTEQNFRLNWA 152
NG+Q+ Q RL+W
Sbjct: 374 LNGSQVGG--QKVRLSWG 389
>gi|223948225|gb|ACN28196.1| unknown [Zea mays]
gi|414590425|tpg|DAA40996.1| TPA: hypothetical protein ZEAMMB73_114709 [Zea mays]
Length = 503
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 148/252 (58%), Positives = 183/252 (72%), Gaps = 4/252 (1%)
Query: 73 IRSLWIGDLQPWMEESYIA-SIFGHTGE-FVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
+R+LWIGDLQ WM+E+Y+ + F + S K+IRNKQT SEGYGFIEF S AAAE
Sbjct: 145 VRTLWIGDLQYWMDENYLHYNAFAPVAQQIASVKIIRNKQTGHSEGYGFIEFYSQAAAEH 204
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
L FNG MP+ E F+LNWA+ G++R D+G D IFVGDLA DVTD +L++ FRA
Sbjct: 205 TLMNFNGQMMPNIEMAFKLNWASASTGDKRGDNGSDHAIFVGDLAPDVTDSMLEDVFRAN 264
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SV+GAKVV DR TGR KGYGFV FGD +EQ R+MTEMNG++ STR MRIG AA+KK
Sbjct: 265 YPSVRGAKVVVDRITGRPKGYGFVHFGDLNEQARAMTEMNGMMLSTRKMRIGAAASKKNT 324
Query: 251 TGQQ--YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA 308
QQ YQ++QG+ ENDPNNTT+FVGGLD +V ++ L+ +F YGE+ +VKIP
Sbjct: 325 DAQQTYATNGAYQSSQGNCSENDPNNTTVFVGGLDSNVDEEYLRQIFTPYGEISYVKIPV 384
Query: 309 GKRCGFVQFANR 320
GK CGFVQF +R
Sbjct: 385 GKHCGFVQFTSR 396
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L ++E Y+ IF GE K+ K GF++F S + AE +Q
Sbjct: 352 TVFVGGLDSNVDEEYLRQIFTPYGEISYVKIPVGKHC------GFVQFTSRSCAEEAIQM 405
Query: 135 FNGTQMPSTEQNFRLNW 151
NG+Q+ Q RL+W
Sbjct: 406 LNGSQIGG--QKARLSW 420
>gi|212276053|ref|NP_001130512.1| uncharacterized protein LOC100191611 [Zea mays]
gi|194689348|gb|ACF78758.1| unknown [Zea mays]
gi|414590424|tpg|DAA40995.1| TPA: hypothetical protein ZEAMMB73_114709 [Zea mays]
Length = 472
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 148/252 (58%), Positives = 183/252 (72%), Gaps = 4/252 (1%)
Query: 73 IRSLWIGDLQPWMEESYIA-SIFGHTGE-FVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
+R+LWIGDLQ WM+E+Y+ + F + S K+IRNKQT SEGYGFIEF S AAAE
Sbjct: 114 VRTLWIGDLQYWMDENYLHYNAFAPVAQQIASVKIIRNKQTGHSEGYGFIEFYSQAAAEH 173
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
L FNG MP+ E F+LNWA+ G++R D+G D IFVGDLA DVTD +L++ FRA
Sbjct: 174 TLMNFNGQMMPNIEMAFKLNWASASTGDKRGDNGSDHAIFVGDLAPDVTDSMLEDVFRAN 233
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SV+GAKVV DR TGR KGYGFV FGD +EQ R+MTEMNG++ STR MRIG AA+KK
Sbjct: 234 YPSVRGAKVVVDRITGRPKGYGFVHFGDLNEQARAMTEMNGMMLSTRKMRIGAAASKKNT 293
Query: 251 TGQQ--YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA 308
QQ YQ++QG+ ENDPNNTT+FVGGLD +V ++ L+ +F YGE+ +VKIP
Sbjct: 294 DAQQTYATNGAYQSSQGNCSENDPNNTTVFVGGLDSNVDEEYLRQIFTPYGEISYVKIPV 353
Query: 309 GKRCGFVQFANR 320
GK CGFVQF +R
Sbjct: 354 GKHCGFVQFTSR 365
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L ++E Y+ IF GE K+ K GF++F S + AE +Q
Sbjct: 321 TVFVGGLDSNVDEEYLRQIFTPYGEISYVKIPVGKHC------GFVQFTSRSCAEEAIQM 374
Query: 135 FNGTQMPSTEQNFRLNW 151
NG+Q+ Q RL+W
Sbjct: 375 LNGSQIGG--QKARLSW 389
>gi|226491568|ref|NP_001142233.1| uncharacterized protein LOC100274401 [Zea mays]
gi|194707728|gb|ACF87948.1| unknown [Zea mays]
gi|414886903|tpg|DAA62917.1| TPA: hypothetical protein ZEAMMB73_604225 [Zea mays]
Length = 465
Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 152/264 (57%), Positives = 186/264 (70%), Gaps = 6/264 (2%)
Query: 61 PYGVAPDASSDGIRSLWIGDLQPWMEESYIA-SIFGHTGE-FVSGKVIRNKQTNFSEGYG 118
PYG P S +R+LWIGDLQ WM+E+Y+ + F + S K+IRNKQT SEGYG
Sbjct: 103 PYGTTP--GSGEVRTLWIGDLQHWMDENYLHYNAFAAVAQQIASVKIIRNKQTGHSEGYG 160
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADV 178
FIEF S AAAE L FNG MP+ E F+LNWA+ G++R D G D TIFVGDLA DV
Sbjct: 161 FIEFYSRAAAEHTLMNFNGQMMPNVEMTFKLNWASASTGDKRGDSGSDRTIFVGDLAHDV 220
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
TD +L++ FRA Y SV+GA VV DR TG KG+GFVRFGD +EQ R+MTEMNG+L STR
Sbjct: 221 TDSMLEDVFRAKYPSVRGANVVVDRMTGWPKGFGFVRFGDLNEQARAMTEMNGMLLSTRQ 280
Query: 239 MRIGPAATKKAATGQQ--YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFG 296
MRIG AA KK QQ YQ+++G+ ENDPNNTT+FVGGLD +V ++ L+ +F
Sbjct: 281 MRIGAAANKKNRDAQQTYATDGAYQSSKGNSSENDPNNTTVFVGGLDSNVNEEYLRQIFT 340
Query: 297 QYGELVHVKIPAGKRCGFVQFANR 320
YGE+ +VKIP GK CGFVQF +R
Sbjct: 341 PYGEISYVKIPVGKHCGFVQFTSR 364
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L + E Y+ IF GE K+ K GF++F S + AE ++
Sbjct: 320 TVFVGGLDSNVNEEYLRQIFTPYGEISYVKIPVGKHC------GFVQFTSRSCAEEAIRM 373
Query: 135 FNGTQMPSTEQNFRLNWA 152
NG+Q+ Q RL+W
Sbjct: 374 LNGSQVGG--QKVRLSWG 389
>gi|302142363|emb|CBI19566.3| unnamed protein product [Vitis vinifera]
Length = 324
Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 150/240 (62%), Positives = 183/240 (76%), Gaps = 5/240 (2%)
Query: 85 MEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTE 144
M+E+Y+ S F TGE S KVIRNKQT SEGYGF+EF SHAAAE+VLQ + G MP+T+
Sbjct: 1 MDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKVLQGYAGVLMPNTD 60
Query: 145 QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRT 204
Q FRLNWAT+ G++R D+GPD +IFVGDLA+DV+D +L ETF Y SVK AKVV D
Sbjct: 61 QPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDAN 120
Query: 205 TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATY---- 260
TGRSKGYGFVRFGDE+E+ ++MTEMNGV CS+RPMRIG AAT + ++G Q Q +++
Sbjct: 121 TGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIG-AATPRKSSGYQQQYSSHGGYA 179
Query: 261 QNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
N Q + D NTTIFVGGLDP+V+D+ L+ F QYGE+V VKIP GK CGFVQFANR
Sbjct: 180 SNGASVQSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANR 239
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 30/209 (14%)
Query: 75 SLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL + +S + F G + KV+ + T S+GYGF+ F + +
Sbjct: 84 SIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMT 143
Query: 134 TFNGTQM-----------PSTEQNFRLNWATYGA----GERRQDDGPDF--TIFVGDLAA 176
NG P ++ ++++G G Q DG TIFVG L
Sbjct: 144 EMNGVYCSSRPMRIGAATPRKSSGYQQQYSSHGGYASNGASVQSDGDSMNTTIFVGGLDP 203
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+V+D L++ F + Y + K+ KG GFV+F + + ++ ++NG +
Sbjct: 204 NVSDEDLRQPF-SQYGEIVSVKIPV------GKGCGFVQFANRNNAEDALQKLNGTVIGK 256
Query: 237 RPMRI----GPAATK-KAATGQQYQKATY 260
+ +R+ PA + +A G Q+ A Y
Sbjct: 257 QTVRLSWGRNPANKQMRADFGNQWSGAYY 285
>gi|356538950|ref|XP_003537963.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 392
Score = 303 bits (776), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 156/257 (60%), Positives = 187/257 (72%), Gaps = 15/257 (5%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ W++ESY++ F H GE VS K+IRNK T EGYGF+EFVSHA+AE L
Sbjct: 9 VRTLWIGDLQYWVDESYLSQCFAHNGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFL 68
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
+T+NG QMP TEQ FRLNWA++G D GPD +IFVGDLA DVTD++LQETFRA Y
Sbjct: 69 RTYNGAQMPGTEQTFRLNWASFG------DSGPDHSIFVGDLAPDVTDFLLQETFRAHYP 122
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SVKGAKVVTD TGRSKGYGFV+F DE+++ R+MTEMNGV CSTRPMRI A KK A+
Sbjct: 123 SVKGAKVVTDPATGRSKGYGFVKFADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNASF 182
Query: 253 Q-QYQ--KATYQN------TQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVH 303
Q QY KA YQ END NNTT+ +G LD +VT++ LK F Q+G++V
Sbjct: 183 QHQYAPPKAMYQFPAYSAPVSAVAPENDVNNTTVCIGNLDLNVTEEELKQTFMQFGDIVL 242
Query: 304 VKIPAGKRCGFVQFANR 320
VKI AGK G+VQF R
Sbjct: 243 VKIYAGKGYGYVQFGTR 259
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 88/212 (41%), Gaps = 31/212 (14%)
Query: 54 PPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTN 112
P ++QT A S S+++GDL P + + + F H KV+ + T
Sbjct: 77 PGTEQTFRLNWASFGDSGPDHSIFVGDLAPDVTDFLLQETFRAHYPSVKGAKVVTDPATG 136
Query: 113 FSEGYGFIEFVSHAAAERVLQTFNGTQM-----------PSTEQNFRLNWA--------- 152
S+GYGF++F A R + NG P +F+ +A
Sbjct: 137 RSKGYGFVKFADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNASFQHQYAPPKAMYQFP 196
Query: 153 TYGA---GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSK 209
Y A ++D + T+ +G+L +VT+ L++TF G V+ G K
Sbjct: 197 AYSAPVSAVAPENDVNNTTVCIGNLDLNVTEEELKQTFMQF-----GDIVLVKIYAG--K 249
Query: 210 GYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
GYG+V+FG ++ M G + + ++I
Sbjct: 250 GYGYVQFGTRVSAEDAIQRMQGKVIGQQVIQI 281
>gi|15239715|ref|NP_197436.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75331115|sp|Q8VXZ9.1|R47BP_ARATH RecName: Full=Polyadenylate-binding protein RBP47B';
Short=Poly(A)-binding protein RBP47B'; AltName:
Full=RNA-binding protein 47B'; Short=AtRBP47B prime;
Short=AtRBP47B'
gi|18377731|gb|AAL67015.1| putative DNA binding protein ACBF [Arabidopsis thaliana]
gi|21281189|gb|AAM45052.1| putative DNA binding protein ACBF [Arabidopsis thaliana]
gi|332005306|gb|AED92689.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 425
Score = 303 bits (776), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 158/261 (60%), Positives = 188/261 (72%), Gaps = 14/261 (5%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ W++E+Y+ S F TGE VS KVIRNK T EGYGFIEF+SHAAAER L
Sbjct: 23 VRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTL 82
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT+NGTQMP TE FRLNWA++G+G++ D GPD +IFVGDLA DVTDY+LQETFR YS
Sbjct: 83 QTYNGTQMPGTELTFRLNWASFGSGQKV-DAGPDHSIFVGDLAPDVTDYLLQETFRVHYS 141
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK-AAT 251
SV+GAKVVTD +TGRSKGYGFV+F +ESE+ R+M EMNG+ CSTRPMRI A KK
Sbjct: 142 SVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMRISAATPKKNVGV 201
Query: 252 GQQY-QKATYQNTQGSQ-----------GENDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
QQY KA Y T S E+D TTI V LD +VT++ LK F Q G
Sbjct: 202 QQQYVTKAVYPVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNVTEEELKKAFSQLG 261
Query: 300 ELVHVKIPAGKRCGFVQFANR 320
E+++VKIPA K G+VQF R
Sbjct: 262 EVIYVKIPATKGYGYVQFKTR 282
>gi|227204263|dbj|BAH56983.1| AT1G11650 [Arabidopsis thaliana]
Length = 271
Score = 303 bits (775), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 154/235 (65%), Positives = 178/235 (75%), Gaps = 14/235 (5%)
Query: 42 PPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFV 101
PPP W PQ PPS Q ++D IR+LWIGDLQ WM+E+++ F HTGE V
Sbjct: 38 PPPQMWNPQAAAPPSVQP--------TTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMV 89
Query: 102 SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPS-TEQNFRLNWATYGAGERR 160
S KVIRNKQT EGYGFIEF SHAAAERVLQTFN +PS +Q FRLNWA+ +G++R
Sbjct: 90 SAKVIRNKQTGQVEGYGFIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKR 149
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
DD PD+TIFVGDLAADVTDY+L ETFRA Y SVKGAKVV DR TGR+KGYGFVRF DES
Sbjct: 150 -DDSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDES 208
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNT-QGSQGENDPNN 274
EQ+R+MTEMNGV CSTRPMRIGPAA+KK TG Q+ +YQ++ G +NDPNN
Sbjct: 209 EQIRAMTEMNGVPCSTRPMRIGPAASKKGVTG---QRDSYQSSAAGVTTDNDPNN 260
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 22/159 (13%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++GDL + + L F A + AKV+ ++ TG+ +GYGF+ F + R +
Sbjct: 63 TLWIGDLQYWMDENFLYGCF-AHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAERVLQ 121
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
N + P Q + + + +D + TIFVG L VT
Sbjct: 122 TFNNAPIPSFP--------------DQLFRLNWASLSSGDKRDDSPDYTIFVGDLAADVT 167
Query: 288 DDILKTVF-GQYGELVHVKIPAG------KRCGFVQFAN 319
D IL F Y + K+ K GFV+F++
Sbjct: 168 DYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSD 206
>gi|356538948|ref|XP_003537962.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 401
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 156/257 (60%), Positives = 187/257 (72%), Gaps = 15/257 (5%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ W++ESY++ F H GE VS K+IRNK T EGYGF+EFVSHA+AE L
Sbjct: 9 VRTLWIGDLQYWVDESYLSQCFAHNGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFL 68
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
+T+NG QMP TEQ FRLNWA++G D GPD +IFVGDLA DVTD++LQETFRA Y
Sbjct: 69 RTYNGAQMPGTEQTFRLNWASFG------DSGPDHSIFVGDLAPDVTDFLLQETFRAHYP 122
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SVKGAKVVTD TGRSKGYGFV+F DE+++ R+MTEMNGV CSTRPMRI A KK A+
Sbjct: 123 SVKGAKVVTDPATGRSKGYGFVKFADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNASF 182
Query: 253 Q-QYQ--KATYQN------TQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVH 303
Q QY KA YQ END NNTT+ +G LD +VT++ LK F Q+G++V
Sbjct: 183 QHQYAPPKAMYQFPAYSAPVSAVAPENDVNNTTVCIGNLDLNVTEEELKQTFMQFGDIVL 242
Query: 304 VKIPAGKRCGFVQFANR 320
VKI AGK G+VQF R
Sbjct: 243 VKIYAGKGYGYVQFGTR 259
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 88/212 (41%), Gaps = 31/212 (14%)
Query: 54 PPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTN 112
P ++QT A S S+++GDL P + + + F H KV+ + T
Sbjct: 77 PGTEQTFRLNWASFGDSGPDHSIFVGDLAPDVTDFLLQETFRAHYPSVKGAKVVTDPATG 136
Query: 113 FSEGYGFIEFVSHAAAERVLQTFNGTQM-----------PSTEQNFRLNWA--------- 152
S+GYGF++F A R + NG P +F+ +A
Sbjct: 137 RSKGYGFVKFADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNASFQHQYAPPKAMYQFP 196
Query: 153 TYGA---GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSK 209
Y A ++D + T+ +G+L +VT+ L++TF G V+ G K
Sbjct: 197 AYSAPVSAVAPENDVNNTTVCIGNLDLNVTEEELKQTFMQF-----GDIVLVKIYAG--K 249
Query: 210 GYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
GYG+V+FG ++ M G + + ++I
Sbjct: 250 GYGYVQFGTRVSAEDAIQRMQGKVIGQQVIQI 281
>gi|15222783|ref|NP_175383.1| RNA-binding protein 47A [Arabidopsis thaliana]
gi|378522727|sp|F4I3B3.1|RB47A_ARATH RecName: Full=Polyadenylate-binding protein RBP47A;
Short=Poly(A)-binding protein RBP47A; AltName:
Full=RNA-binding protein 47A; Short=AtRBP47A
gi|332194327|gb|AEE32448.1| RNA-binding protein 47A [Arabidopsis thaliana]
Length = 445
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 151/257 (58%), Positives = 185/257 (71%), Gaps = 7/257 (2%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +++LW+GDL WM+E+Y+ + F HT E S KVIRNKQT SEGYGF+EF+S +AAE
Sbjct: 116 DDVKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEE 175
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERR-QDDGPDFTIFVGDLAADVTDYVLQETFRA 189
LQ+F+G MP+ EQ FRLNWA++ GE+R ++GPD +IFVGDLA DV+D VL ETF
Sbjct: 176 ALQSFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAG 235
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA 249
Y SVKGAKVV D TGRSKGYGFVRFGDE+E+ R+MTEMNG CS+R MR+G A K+A
Sbjct: 236 RYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRA 295
Query: 250 AT-GQQ-----YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVH 303
A GQQ A GS + + NN+TIFVGGLD VT++ L F +GE+V
Sbjct: 296 AAYGQQNGSQALTLAGGHGGNGSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVS 355
Query: 304 VKIPAGKRCGFVQFANR 320
VKIP GK CGFVQFANR
Sbjct: 356 VKIPVGKGCGFVQFANR 372
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 76/188 (40%), Gaps = 28/188 (14%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL P + ++ + F V G KV+ + T S+GYGF+ F R +
Sbjct: 214 SIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMT 273
Query: 134 TFNGTQMPSTE--------------------QNFRLNWATYGAGERRQDDGPDFTIFVGD 173
NG S + Q L G G + + TIFVG
Sbjct: 274 EMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGGNGSMSDGESNNSTIFVGG 333
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
L ADVT+ L + F + + V K+ KG GFV+F + ++ +NG +
Sbjct: 334 LDADVTEEDLMQPF-SDFGEVVSVKIPV------GKGCGFVQFANRQSAEEAIGNLNGTV 386
Query: 234 CSTRPMRI 241
+R+
Sbjct: 387 IGKNTVRL 394
>gi|15594035|emb|CAC69852.1| nucleic acid binding protein [Nicotiana tabacum]
Length = 456
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 151/253 (59%), Positives = 189/253 (74%), Gaps = 7/253 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++W+GDL WM+E Y+ + F T E S KVIRNKQT FSEGYGF+EF +HAAAE+VLQ
Sbjct: 117 RTIWVGDLLNWMDEDYLRNCFASTNEVASIKVIRNKQTGFSEGYGFVEFFTHAAAEKVLQ 176
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T++ MP+ +Q FRLNWAT+ G++R ++G D +IFVGDLAADVTD +L ETF Y S
Sbjct: 177 TYSCMTMPNVDQPFRLNWATFSMGDKRANNGSDLSIFVGDLAADVTDTLLHETFATKYPS 236
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VK AKVV D TGRSKGYGFVRFGD++E+ ++MTEMNGV CS+RPMRIG AAT + ++G
Sbjct: 237 VKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIG-AATPRKSSGY 295
Query: 254 QYQKAT---YQN---TQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP 307
Q Q ++ Y N QGSQ + D NTTIFVGGLDP+V+D+ L+ F QYGE+V VKIP
Sbjct: 296 QQQYSSQGGYSNGGPAQGSQPDADSTNTTIFVGGLDPNVSDEDLRQPFVQYGEIVSVKIP 355
Query: 308 AGKRCGFVQFANR 320
+R QFANR
Sbjct: 356 VEERVWVWQFANR 368
>gi|356541997|ref|XP_003539458.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 392
Score = 302 bits (773), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 155/257 (60%), Positives = 188/257 (73%), Gaps = 15/257 (5%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ W++ESY++ F H+GE VS K+IRNK T EGYGF+EFVSHA+AE L
Sbjct: 9 VRTLWIGDLQYWVDESYLSQCFAHSGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFL 68
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
+TFNG QMP T+Q FRLNWA++G D GPD +IFVGDLA DVTD++LQETFRA Y
Sbjct: 69 RTFNGAQMPGTDQTFRLNWASFG------DSGPDHSIFVGDLAPDVTDFILQETFRAHYP 122
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SVKG+KVVTD TGRSKGYGFV+F DE+++ R+MTEMNGV CSTRPMRI A KK A+
Sbjct: 123 SVKGSKVVTDPATGRSKGYGFVKFADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNASF 182
Query: 253 Q-QYQ--KATYQN------TQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVH 303
Q QY KA YQ END NNTT+ +G LD +VT++ LK F Q+G++V
Sbjct: 183 QHQYAPPKAMYQFPAYTAPVSTVAPENDVNNTTVCIGNLDLNVTEEELKQAFVQFGDIVL 242
Query: 304 VKIPAGKRCGFVQFANR 320
VKI AGK G+VQF R
Sbjct: 243 VKIYAGKGYGYVQFGTR 259
>gi|145334517|ref|NP_001078604.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332005307|gb|AED92690.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 421
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 155/258 (60%), Positives = 186/258 (72%), Gaps = 12/258 (4%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ W++E+Y+ S F TGE VS KVIRNK T EGYGFIEF+SHAAAER L
Sbjct: 23 VRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTL 82
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT+NGTQMP TE FRLNWA++G+G++ D GPD +IFVGDLA DVTDY+LQETFR YS
Sbjct: 83 QTYNGTQMPGTELTFRLNWASFGSGQKV-DAGPDHSIFVGDLAPDVTDYLLQETFRVHYS 141
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SV+GAKVVTD +TGRSKGYGFV+F +ESE+ R+M EMNG+ CSTRPMRI AAT K G
Sbjct: 142 SVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMRIS-AATPKKNVG 200
Query: 253 QQYQKATYQNTQGSQG----------ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
Q Q T + E+D TTI V LD +VT++ LK F Q GE++
Sbjct: 201 VQQQYVTKVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNVTEEELKKAFSQLGEVI 260
Query: 303 HVKIPAGKRCGFVQFANR 320
+VKIPA K G+VQF R
Sbjct: 261 YVKIPATKGYGYVQFKTR 278
>gi|356541995|ref|XP_003539457.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 401
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 155/257 (60%), Positives = 188/257 (73%), Gaps = 15/257 (5%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ W++ESY++ F H+GE VS K+IRNK T EGYGF+EFVSHA+AE L
Sbjct: 9 VRTLWIGDLQYWVDESYLSQCFAHSGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFL 68
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
+TFNG QMP T+Q FRLNWA++G D GPD +IFVGDLA DVTD++LQETFRA Y
Sbjct: 69 RTFNGAQMPGTDQTFRLNWASFG------DSGPDHSIFVGDLAPDVTDFILQETFRAHYP 122
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SVKG+KVVTD TGRSKGYGFV+F DE+++ R+MTEMNGV CSTRPMRI A KK A+
Sbjct: 123 SVKGSKVVTDPATGRSKGYGFVKFADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNASF 182
Query: 253 Q-QYQ--KATYQN------TQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVH 303
Q QY KA YQ END NNTT+ +G LD +VT++ LK F Q+G++V
Sbjct: 183 QHQYAPPKAMYQFPAYTAPVSTVAPENDVNNTTVCIGNLDLNVTEEELKQAFVQFGDIVL 242
Query: 304 VKIPAGKRCGFVQFANR 320
VKI AGK G+VQF R
Sbjct: 243 VKIYAGKGYGYVQFGTR 259
>gi|15220233|ref|NP_175180.1| RNA-binding protein 47C [Arabidopsis thaliana]
gi|75337807|sp|Q9SX79.1|RB47C_ARATH RecName: Full=Polyadenylate-binding protein RBP47C;
Short=Poly(A)-binding protein RBP47C; AltName:
Full=RNA-binding protein 47C; Short=AtRBP47C
gi|5668812|gb|AAD46038.1|AC007519_23 Contains 3 PF|00076 RNA recognition motif domains. ESTs gb|R30092,
gb|R30093, gb|AA394338, gb|N65719 and gb|AA597577 come
from this gene [Arabidopsis thaliana]
gi|12744993|gb|AAK06876.1|AF344325_1 putative DNA binding protein [Arabidopsis thaliana]
gi|14334552|gb|AAK59684.1| putative DNA binding protein [Arabidopsis thaliana]
gi|17065624|gb|AAL33806.1| putative DNA binding protein [Arabidopsis thaliana]
gi|332194053|gb|AEE32174.1| RNA-binding protein 47C [Arabidopsis thaliana]
Length = 432
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 159/315 (50%), Positives = 204/315 (64%), Gaps = 26/315 (8%)
Query: 31 QQQQQQHQTPVPPP--------------VGWTPQPVPPPSQQTQPYGVAP--------DA 68
+++ Q +P PPP + + P P PP Q + + +A
Sbjct: 36 EEENQPKTSPTPPPHWMRYPPTVIIPHQMMYAPPPFPPYHQYPNHHHLHHQSRGNKHQNA 95
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIF--GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHA 126
+ +++W+GDL WM+E+Y+ S F G E VS KVIRNK SEGYGF+EF SH
Sbjct: 96 FNGENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHD 155
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR-QDDGPDFTIFVGDLAADVTDYVLQE 185
A++VL+ FNGT MP+T+Q FRLNWA++ GE+R +++GPD +IFVGDL+ DV+D +L E
Sbjct: 156 VADKVLREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHE 215
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF Y SVK AKVV D TGRSKGYGFVRFGDE+E+ ++MTEMNGV CS+R MRIGPA
Sbjct: 216 TFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPAT 275
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
+K G Q Q N ++ E D NTTIFVGGLD SVTD+ LK F ++GE+V VK
Sbjct: 276 PRK-TNGYQQQGGYMPNGTLTRPEGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEIVSVK 334
Query: 306 IPAGKRCGFVQFANR 320
IP GK CGFVQF NR
Sbjct: 335 IPVGKGCGFVQFVNR 349
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 25/183 (13%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL P + ++ + F V + KV+ + T S+GYGF+ F + +
Sbjct: 198 SIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMT 257
Query: 134 TFNGTQMPSTEQNFRLNWAT---------------YGAGERRQDDGPDFTIFVGDLAADV 178
NG + S + R+ AT G R + D + TIFVG L + V
Sbjct: 258 EMNGVKCSS--RAMRIGPATPRKTNGYQQQGGYMPNGTLTRPEGDIMNTTIFVGGLDSSV 315
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
TD L++ F + + K+ KG GFV+F + ++ ++NG + +
Sbjct: 316 TDEDLKQPFNE-FGEIVSVKIPV------GKGCGFVQFVNRPNAEEALEKLNGTVIGKQT 368
Query: 239 MRI 241
+R+
Sbjct: 369 VRL 371
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L + + + F GE VS K+ K G GF++FV+ AE L+
Sbjct: 305 TIFVGGLDSSVTDEDLKQPFNEFGEIVSVKIPVGK------GCGFVQFVNRPNAEEALEK 358
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQD 162
NGT + +Q RL+W A ++ +D
Sbjct: 359 LNGTVI--GKQTVRLSWGRNPANKQPRD 384
>gi|297834824|ref|XP_002885294.1| RNA-binding protein 47B [Arabidopsis lyrata subsp. lyrata]
gi|297331134|gb|EFH61553.1| RNA-binding protein 47B [Arabidopsis lyrata subsp. lyrata]
Length = 435
Score = 300 bits (768), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 159/317 (50%), Positives = 198/317 (62%), Gaps = 38/317 (11%)
Query: 16 YQQQHQQWMAYQQQSQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRS 75
YQ H Q +Q S QQ QQ P+ S D +++
Sbjct: 76 YQHHHPQ--LHQYGSYQQHQQQHKPLDR------------------------GSGDDVKT 109
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
LW+GDL WM+E+Y+ S F HTGE S KVIRNK T+ SEGYGFIEF+S AAAE VLQ +
Sbjct: 110 LWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFIEFLSRAAAEEVLQNY 169
Query: 136 NGTQMPSTEQNFRLNWATYGAGERRQ-DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
+G+ MP+++Q FR+NWA++ GE+R ++GPD +IFVGDL+ DVTD +L ETF Y SV
Sbjct: 170 SGSLMPNSDQPFRINWASFSTGEKRAVENGPDLSIFVGDLSPDVTDALLHETFFDRYPSV 229
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
K AKVV D TGRSKGYGFVRFGDE+E+ R++TEMNG CS R MR+G A K+A QQ
Sbjct: 230 KSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGVATPKRAIANQQ 289
Query: 255 YQK-----------ATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVH 303
A GSQ + + N TIFVGG+D VTD+ L+ F Q+GE+V
Sbjct: 290 QHSSQALILAGGHGANGSMAHGSQSDGESTNATIFVGGIDADVTDEDLRQPFSQFGEVVS 349
Query: 304 VKIPAGKRCGFVQFANR 320
VKIP GK CGFVQFA R
Sbjct: 350 VKIPVGKGCGFVQFAER 366
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 41/213 (19%)
Query: 75 SLWIGDLQPWMEESYI-ASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL P + ++ + + F S KV+ + T S+GYGF+ F R L
Sbjct: 203 SIFVGDLSPDVTDALLHETFFDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALT 262
Query: 134 TFNGTQMPSTEQNFRLNWAT---------------------YGA------GERRQDDGPD 166
NG + + R+ AT +GA G + + +
Sbjct: 263 EMNGAYC--SNRQMRVGVATPKRAIANQQQHSSQALILAGGHGANGSMAHGSQSDGESTN 320
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
TIFVG + ADVTD L++ F + + V K+ KG GFV+F + ++
Sbjct: 321 ATIFVGGIDADVTDEDLRQPF-SQFGEVVSVKIPV------GKGCGFVQFAERKSAEDAI 373
Query: 227 TEMNGVLCSTRPMRI----GPAATKKAATGQQY 255
+NG + +R+ P + +GQQ+
Sbjct: 374 ETLNGTVIGKNTVRLSWGRSPNKQWRGDSGQQW 406
>gi|357480265|ref|XP_003610418.1| RNA-binding protein [Medicago truncatula]
gi|355511473|gb|AES92615.1| RNA-binding protein [Medicago truncatula]
Length = 319
Score = 300 bits (768), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 155/269 (57%), Positives = 181/269 (67%), Gaps = 43/269 (15%)
Query: 47 WTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVI 106
W P PP Q V P +S+D +++LWIGDLQ WM+E+Y+ + F HTGE S KVI
Sbjct: 52 WAPNAQPP-----QQSAVPPPSSADEVKTLWIGDLQYWMDENYLYNCFSHTGEVGSVKVI 106
Query: 107 RNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPD 166
RNKQTN SEGYGF+EF+S A AERVLQTFNGT MP+ QNFRLNWAT+ +GE+R DD PD
Sbjct: 107 RNKQTNQSEGYGFLEFISRAGAERVLQTFNGTIMPNGGQNFRLNWATFSSGEKRHDDSPD 166
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
+TIFVGDLAADV+D+ L E FR Y+SVKGAKVV DRTTGR+KGYGFVRF DESEQ+R+M
Sbjct: 167 YTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRFADESEQMRAM 226
Query: 227 TEMNGVLCSTRPMRIGPAATKKAAT--------------------------GQQY----- 255
TEM GVLCSTRPMRIGPA+ K T Y
Sbjct: 227 TEMQGVLCSTRPMRIGPASNKNLGTQTSKAVHFIIYMVLVYFLSFFYELLPSMSYVIYLF 286
Query: 256 ------QKATYQNTQ-GSQGENDPNNTTI 277
A+YQN Q G+Q ENDPNNTT+
Sbjct: 287 ILFYFENAASYQNPQGGAQNENDPNNTTV 315
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++GDL + + L F V KV+ ++ T +S+GYGF+ F + R +
Sbjct: 75 TLWIGDLQYWMDENYLYNCFSHT-GEVGSVKVIRNKQTNQSEGYGFLEFISRAGAERVLQ 133
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
NG + GQ ++ + G + +D + TIFVG L V+
Sbjct: 134 TFNGTIMPN--------------GGQNFRLNWATFSSGEKRHDDSPDYTIFVGDLAADVS 179
Query: 288 DDILKTVF-GQYGELVHVKIPAG------KRCGFVQFAN 319
D L VF +Y + K+ K GFV+FA+
Sbjct: 180 DHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRFAD 218
>gi|9294614|dbj|BAB02953.1| DNA/RNA binding protein-like [Arabidopsis thaliana]
Length = 489
Score = 300 bits (767), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 145/264 (54%), Positives = 185/264 (70%), Gaps = 12/264 (4%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S D +++LW+GDL WM+E+Y+ S F HTGE S KVIRNK T+ SEGYGF+EF+S AAA
Sbjct: 103 SGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAA 162
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQ-DDGPDFTIFVGDLAADVTDYVLQETF 187
E VLQ ++G+ MP+++Q FR+NWA++ GE+R ++GPD ++FVGDL+ DVTD +L ETF
Sbjct: 163 EEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHETF 222
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
Y SVK AKVV D TGRSKGYGFVRFGDE+E+ R++TEMNG CS R MR+G A K
Sbjct: 223 SDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATPK 282
Query: 248 KAATGQQYQKATYQNTQGSQGEN-----------DPNNTTIFVGGLDPSVTDDILKTVFG 296
+A QQ + G G N + N TIFVGG+DP V D+ L+ F
Sbjct: 283 RAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPFS 342
Query: 297 QYGELVHVKIPAGKRCGFVQFANR 320
Q+GE+V VKIP GK CGFVQFA+R
Sbjct: 343 QFGEVVSVKIPVGKGCGFVQFADR 366
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 77/195 (39%), Gaps = 37/195 (18%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL P + + + F V S KV+ + T S+GYGF+ F R L
Sbjct: 203 SVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALT 262
Query: 134 TFNGTQMPSTEQNFRLNWAT---------------------------YGAGERRQDDGPD 166
NG + + R+ AT G G + + +
Sbjct: 263 EMNGAY--CSNRQMRVGIATPKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTN 320
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
TIFVG + DV D L++ F + + V K+ KG GFV+F D ++
Sbjct: 321 ATIFVGGIDPDVIDEDLRQPF-SQFGEVVSVKIPV------GKGCGFVQFADRKSAEDAI 373
Query: 227 TEMNGVLCSTRPMRI 241
+NG + +R+
Sbjct: 374 ESLNGTVIGKNTVRL 388
>gi|15230291|ref|NP_188544.1| RNA-binding protein 47B [Arabidopsis thaliana]
gi|122246579|sp|Q0WW84.1|RB47B_ARATH RecName: Full=Polyadenylate-binding protein RBP47B;
Short=Poly(A)-binding protein RBP47B; AltName:
Full=RNA-binding protein 47B; Short=AtRBP47B
gi|110741040|dbj|BAE98614.1| putative nuclear acid binding protein [Arabidopsis thaliana]
gi|111074446|gb|ABH04596.1| At3g19130 [Arabidopsis thaliana]
gi|332642675|gb|AEE76196.1| RNA-binding protein 47B [Arabidopsis thaliana]
Length = 435
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 145/265 (54%), Positives = 185/265 (69%), Gaps = 12/265 (4%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
S D +++LW+GDL WM+E+Y+ S F HTGE S KVIRNK T+ SEGYGF+EF+S AA
Sbjct: 102 GSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAA 161
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQ-DDGPDFTIFVGDLAADVTDYVLQET 186
AE VLQ ++G+ MP+++Q FR+NWA++ GE+R ++GPD ++FVGDL+ DVTD +L ET
Sbjct: 162 AEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHET 221
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
F Y SVK AKVV D TGRSKGYGFVRFGDE+E+ R++TEMNG CS R MR+G A
Sbjct: 222 FSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATP 281
Query: 247 KKAATGQQYQKATYQNTQGSQGEN-----------DPNNTTIFVGGLDPSVTDDILKTVF 295
K+A QQ + G G N + N TIFVGG+DP V D+ L+ F
Sbjct: 282 KRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPF 341
Query: 296 GQYGELVHVKIPAGKRCGFVQFANR 320
Q+GE+V VKIP GK CGFVQFA+R
Sbjct: 342 SQFGEVVSVKIPVGKGCGFVQFADR 366
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 84/214 (39%), Gaps = 41/214 (19%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL P + + + F V S KV+ + T S+GYGF+ F R L
Sbjct: 203 SVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALT 262
Query: 134 TFNGTQMPSTEQNFRLNWAT---------------------------YGAGERRQDDGPD 166
NG + + R+ AT G G + + +
Sbjct: 263 EMNGAYC--SNRQMRVGIATPKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTN 320
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
TIFVG + DV D L++ F + + V K+ KG GFV+F D ++
Sbjct: 321 ATIFVGGIDPDVIDEDLRQPF-SQFGEVVSVKIPV------GKGCGFVQFADRKSAEDAI 373
Query: 227 TEMNGVLCSTRPMRI----GPAATKKAATGQQYQ 256
+NG + +R+ P + +GQQ+
Sbjct: 374 ESLNGTVIGKNTVRLSWGRSPNKQWRGDSGQQWN 407
>gi|21618243|gb|AAM67293.1| nuclear acid binding protein, putative [Arabidopsis thaliana]
Length = 392
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 145/265 (54%), Positives = 185/265 (69%), Gaps = 12/265 (4%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
S D +++LW+GDL WM+E+Y+ S F HTGE S KVIRNK T+ SEGYGF+EF+S AA
Sbjct: 59 GSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAA 118
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQ-DDGPDFTIFVGDLAADVTDYVLQET 186
AE VLQ ++G+ MP+++Q FR+NWA++ GE+R ++GPD ++FVGDL+ DVTD +L ET
Sbjct: 119 AEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHET 178
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
F Y SVK AKVV D TGRSKGYGFVRFGDE+E+ R++TEMNG CS R MR+G A
Sbjct: 179 FSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATP 238
Query: 247 KKAATGQQYQKATYQNTQGSQGEN-----------DPNNTTIFVGGLDPSVTDDILKTVF 295
K+A QQ + G G N + N TIFVGG+DP V D+ L+ F
Sbjct: 239 KRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPF 298
Query: 296 GQYGELVHVKIPAGKRCGFVQFANR 320
Q+GE+V VKIP GK CGFVQFA+R
Sbjct: 299 SQFGEVVSVKIPVGKGCGFVQFADR 323
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 84/214 (39%), Gaps = 41/214 (19%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL P + + + F V S KV+ + T S+GYGF+ F R L
Sbjct: 160 SVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALT 219
Query: 134 TFNGTQMPSTEQNFRLNWAT---------------------------YGAGERRQDDGPD 166
NG + + R+ AT G G + + +
Sbjct: 220 EMNGAYC--SNRQMRVGIATPKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTN 277
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
TIFVG + DV D L++ F + + V K+ KG GFV+F D ++
Sbjct: 278 ATIFVGGIDPDVIDEDLRQPF-SQFGEVVSVKIPV------GKGCGFVQFADRKSAEDAI 330
Query: 227 TEMNGVLCSTRPMRI----GPAATKKAATGQQYQ 256
+NG + +R+ P + +GQQ+
Sbjct: 331 ESLNGTVIGKNTVRLSWGRSPNKQWRGDSGQQWN 364
>gi|15220241|ref|NP_175181.1| RNA-binding protein 47C' [Arabidopsis thaliana]
gi|75337808|sp|Q9SX80.1|R47CP_ARATH RecName: Full=Polyadenylate-binding protein RBP47C';
Short=Poly(A)-binding protein RBP47C'; AltName:
Full=RNA-binding protein 47C'; Short=AtRBP47C prime;
Short=AtRBP47C'
gi|5668811|gb|AAD46037.1|AC007519_22 Contains 3 PF|00076 RNA recognition motif domains. EST gb|T20424
comes from this gene [Arabidopsis thaliana]
gi|110743035|dbj|BAE99410.1| hypothetical protein [Arabidopsis thaliana]
gi|124301030|gb|ABN04767.1| At1g47500 [Arabidopsis thaliana]
gi|332194057|gb|AEE32178.1| RNA-binding protein 47C' [Arabidopsis thaliana]
Length = 434
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 148/250 (59%), Positives = 182/250 (72%), Gaps = 4/250 (1%)
Query: 74 RSLWIGDLQPWMEESYIASIF--GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
+++W+GDLQ WM+E+Y+ S F E VS KVIRNK SEGYGF+EF SH A++V
Sbjct: 103 KTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVEFESHDVADKV 162
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERR-QDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
LQ FNG MP+T+Q FRLNWA++ GE+R +++GPD +IFVGDLA DV+D +L ETF
Sbjct: 163 LQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDALLHETFSEK 222
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVK AKVV D TGRSKGYGFVRFGDE+E+ ++MTEMNGV CS+R MRIGPA +K
Sbjct: 223 YPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRK-T 281
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
G Q Q + ++ E D NTTIFVGGLD SVTD+ LK F ++GE+V VKIP GK
Sbjct: 282 NGYQQQGGYMPSGAFTRSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKIPVGK 341
Query: 311 RCGFVQFANR 320
CGFVQF NR
Sbjct: 342 GCGFVQFVNR 351
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL P + ++ + F V + KV+ + T S+GYGF+ F + +
Sbjct: 200 SIFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMT 259
Query: 134 TFNGTQMPSTEQNFRLNWAT---------------YGAGERRQDDGPDFTIFVGDLAADV 178
NG + S + R+ AT GA R + D + TIFVG L + V
Sbjct: 260 EMNGVKCSS--RAMRIGPATPRKTNGYQQQGGYMPSGAFTRSEGDTINTTIFVGGLDSSV 317
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
TD L++ F + + + K+ KG GFV+F + ++ ++NG + +
Sbjct: 318 TDEDLKQPF-SEFGEIVSVKIPV------GKGCGFVQFVNRPNAEEALEKLNGTVIGKQT 370
Query: 239 MRI 241
+R+
Sbjct: 371 VRL 373
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Query: 61 PYGVAPDASSDGIRS-LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGF 119
P G + D I + +++G L + + + F GE VS K+ K G GF
Sbjct: 292 PSGAFTRSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKIPVGK------GCGF 345
Query: 120 IEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD 162
++FV+ AE L+ NGT + +Q RL+W A ++ +D
Sbjct: 346 VQFVNRPNAEEALEKLNGTVI--GKQTVRLSWGRNPANKQPRD 386
>gi|449488366|ref|XP_004158014.1| PREDICTED: polyadenylate-binding protein RBP45B-like [Cucumis
sativus]
Length = 260
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 147/216 (68%), Positives = 170/216 (78%), Gaps = 8/216 (3%)
Query: 47 WTPQPVPPPSQQTQPYGVAP-DASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKV 105
W QP Q P G P A+ D +R+LWIGDLQ WM+E+YI + F HTGE S KV
Sbjct: 43 WPQQP-----QAGSPQGQPPQSANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKV 97
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
IRNKQT SEGYGFIEF++ AAERVLQT+NGT MP+ QNFRLNWA+ AGE+RQDD P
Sbjct: 98 IRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWAS--AGEKRQDDSP 155
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
D+TIFVGDLA DVTDYVLQETFRA Y+SVKGAKVV DR TGR+KGYGFV+FGDESEQ+R+
Sbjct: 156 DYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQIRA 215
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQ 261
MTEMNGV CS+RPMRIGPAA K + QQ+ K+ Y+
Sbjct: 216 MTEMNGVHCSSRPMRIGPAANKNTSGSQQFSKSKYE 251
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 24/159 (15%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++GDL + + + F A V KV+ ++ TG+S+GYGF+ F R +
Sbjct: 67 TLWIGDLQYWMDENYIFNCF-AHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQ 125
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
NG G Q + + + G + ++D + TIFVG L VT
Sbjct: 126 TYNGTAM---------------PNGAQNFRLNWA-SAGEKRQDDSPDYTIFVGDLAGDVT 169
Query: 288 DDILKTVF-GQYGELVHVKIPAG------KRCGFVQFAN 319
D +L+ F +Y + K+ K GFV+F +
Sbjct: 170 DYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGD 208
>gi|10120421|gb|AAG13046.1|AC011807_5 Putative RNA binding protein [Arabidopsis thaliana]
Length = 468
Score = 293 bits (751), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 151/280 (53%), Positives = 185/280 (66%), Gaps = 30/280 (10%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +++LW+GDL WM+E+Y+ + F HT E S KVIRNKQT SEGYGF+EF+S +AAE
Sbjct: 116 DDVKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEE 175
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERR-QDDGPDFTIFVGDLAADVTDYVLQETFRA 189
LQ+F+G MP+ EQ FRLNWA++ GE+R ++GPD +IFVGDLA DV+D VL ETF
Sbjct: 176 ALQSFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAG 235
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA 249
Y SVKGAKVV D TGRSKGYGFVRFGDE+E+ R+MTEMNG CS+R MR+G A K+A
Sbjct: 236 RYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRA 295
Query: 250 AT-GQQ----------------------------YQKATYQNTQGSQGENDPNNTTIFVG 280
A GQQ A GS + + NN+TIFVG
Sbjct: 296 AAYGQQNGSQGLITCLDALNIASEVNCNVFIGLALTLAGGHGGNGSMSDGESNNSTIFVG 355
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
GLD VT++ L F +GE+V VKIP GK CGFVQFANR
Sbjct: 356 GLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANR 395
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 78/211 (36%), Gaps = 51/211 (24%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL P + ++ + F V G KV+ + T S+GYGF+ F R +
Sbjct: 214 SIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMT 273
Query: 134 TFNGTQMPSTEQNF-------------------------RLNWATY-------------- 154
NG S + LN A+
Sbjct: 274 EMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQGLITCLDALNIASEVNCNVFIGLALTLA 333
Query: 155 ----GAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKG 210
G G + + TIFVG L ADVT+ L + F + + V K+ KG
Sbjct: 334 GGHGGNGSMSDGESNNSTIFVGGLDADVTEEDLMQPF-SDFGEVVSVKIPV------GKG 386
Query: 211 YGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
GFV+F + ++ +NG + +R+
Sbjct: 387 CGFVQFANRQSAEEAIGNLNGTVIGKNTVRL 417
>gi|297852632|ref|XP_002894197.1| hypothetical protein ARALYDRAFT_474095 [Arabidopsis lyrata subsp.
lyrata]
gi|297340039|gb|EFH70456.1| hypothetical protein ARALYDRAFT_474095 [Arabidopsis lyrata subsp.
lyrata]
Length = 450
Score = 293 bits (751), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 167/332 (50%), Positives = 203/332 (61%), Gaps = 38/332 (11%)
Query: 23 WMAYQQQ-------------------------SQQQQQQHQTPVPPPVGWTPQPVPPPSQ 57
WMA QQ +Q QQH P
Sbjct: 50 WMAAMQQYPAAAMAMMQQQQMMMYPHHQYAPYNQAAYQQH----PQFQYAAAYQQQQQHH 105
Query: 58 QTQPYGVAPDASS--DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSE 115
Q+Q P S D +++LW+GDL WM+E+Y+ + F HT E S KVIRNKQT SE
Sbjct: 106 QSQQQKQQPRGGSGGDDVKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSE 165
Query: 116 GYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR-QDDGPDFTIFVGDL 174
GYGF+EF+S +AAE LQ+F+G MP+ EQ FRLNWA++ GE+R ++GPD +IFVGDL
Sbjct: 166 GYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDL 225
Query: 175 AADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLC 234
A DV+D VL ETF Y SVKGAKVV D TGRSKGYGFVRFGDE+E+ R+MTEMNG C
Sbjct: 226 APDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFC 285
Query: 235 STRPMRIGPAATKKAAT-GQQ--YQKATYQNTQGSQG---ENDPNNTTIFVGGLDPSVTD 288
S+R MR+G A K+AA GQQ Q T G G + + NN+TIFVGGLD VT+
Sbjct: 286 SSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGGNGSLSDGESNNSTIFVGGLDADVTE 345
Query: 289 DILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
+ L F Q+GE+V VKIP GK CGFVQFANR
Sbjct: 346 EDLMQPFSQFGEVVSVKIPVGKGCGFVQFANR 377
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 86/216 (39%), Gaps = 33/216 (15%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL P + ++ + F V G KV+ + T S+GYGF+ F R +
Sbjct: 219 SIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMT 278
Query: 134 TFNGTQMPSTE--------------------QNFRLNWATYGAGERRQDDGPDFTIFVGD 173
NG S + Q L G G + + TIFVG
Sbjct: 279 EMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGGNGSLSDGESNNSTIFVGG 338
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
L ADVT+ L + F + + V K+ KG GFV+F + ++ +NG +
Sbjct: 339 LDADVTEEDLMQPF-SQFGEVVSVKIPV------GKGCGFVQFANRQSAEEAIGNLNGTV 391
Query: 234 CSTRPMRI----GPAATKKAATGQQYQKATYQNTQG 265
+R+ P ++ TG Q+ Y QG
Sbjct: 392 IGKNTVRLSWGRSPNKQWRSDTGNQWNGG-YSRGQG 426
>gi|413922759|gb|AFW62691.1| hypothetical protein ZEAMMB73_026342 [Zea mays]
Length = 430
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 144/294 (48%), Positives = 193/294 (65%), Gaps = 21/294 (7%)
Query: 40 PVPPPVGWTPQPVPPPSQQTQPY-------------GVAPDASSDGIRSLWIGDLQPWME 86
P PPP PPPS Q + G + D R++W+GDLQ WM+
Sbjct: 58 PYPPPHHPMVAAPPPPSLQFVKHFTPPSSVTPPPPTGSGGNGGEDN-RTIWVGDLQYWMD 116
Query: 87 ESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQN 146
E+Y+ S FG +GE V+ KVIRN+ + SEGYGFIEF +H +AE+ LQ F+G MP+T++
Sbjct: 117 ENYLHSCFGSSGEVVNIKVIRNRHSGVSEGYGFIEFYTHVSAEKALQNFSGHVMPNTDRA 176
Query: 147 FRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTG 206
F+LNWA+Y GE+R + D +IFVGDLA DVTD +L E F Y SVKGAKV+ D TG
Sbjct: 177 FKLNWASYSMGEKRSEISSDHSIFVGDLAVDVTDAMLLELFSNKYRSVKGAKVIIDANTG 236
Query: 207 RSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGS 266
RS+GYGFVRFGD+++++ +MTEMNGV CSTRP+R+GPA +++ + +
Sbjct: 237 RSRGYGFVRFGDDNDKIHAMTEMNGVYCSTRPIRVGPATPRRS-------QGDSGTSPPR 289
Query: 267 QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
Q D N T++VGGLDP+V++D L+ F +YG+L VKIP GK+CGFVQF NR
Sbjct: 290 QSHVDSTNRTVYVGGLDPNVSEDELRKAFAKYGDLASVKIPFGKQCGFVQFVNR 343
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++++G L P + E + F G+ S K+ KQ GF++FV+ AE L
Sbjct: 298 RTVYVGGLDPNVSEDELRKAFAKYGDLASVKIPFGKQC------GFVQFVNRVDAEEALH 351
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDD 163
NG+ + +Q RL+W A ++ + D
Sbjct: 352 GLNGSTI--GKQAVRLSWGRSPASKQSRGD 379
>gi|242073268|ref|XP_002446570.1| hypothetical protein SORBIDRAFT_06g018280 [Sorghum bicolor]
gi|241937753|gb|EES10898.1| hypothetical protein SORBIDRAFT_06g018280 [Sorghum bicolor]
Length = 423
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 138/247 (55%), Positives = 186/247 (75%), Gaps = 7/247 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++W+GDLQ WM+E+Y+ S FG +GE V+ KVIRN+QT SEGYGF+EF SHA+AE+ LQ
Sbjct: 101 KTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASAEKALQ 160
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F G MP+T++ F+LNWA+Y GE+R + D +IFVGDLAADVTD +L E F + Y S
Sbjct: 161 NFTGHVMPNTDRAFKLNWASYSMGEKRSEVASDHSIFVGDLAADVTDEMLLELFSSKYRS 220
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKV+ D TGRS+GYGFVRFGD++++ +M+EMNGV CSTRP+RIGP AT +
Sbjct: 221 VKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMSEMNGVYCSTRPIRIGP------ATPR 274
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
+ + +T G + D +N T++VGGLDP+V++D L+ F +YG+L VKIP GK+CG
Sbjct: 275 RSSGDSGSSTPG-HSDGDSSNRTVYVGGLDPNVSEDELRKAFAKYGDLASVKIPLGKQCG 333
Query: 314 FVQFANR 320
FVQFA+R
Sbjct: 334 FVQFASR 340
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 17/176 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL + + + +F V G KVI + T S GYGF+ F +
Sbjct: 195 SIFVGDLAADVTDEMLLELFSSKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMS 254
Query: 134 TFNGTQM--------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
NG P+T + + + G D + T++VG L +V++ L++
Sbjct: 255 EMNGVYCSTRPIRIGPATPRRSSGDSGSSTPGHS-DGDSSNRTVYVGGLDPNVSEDELRK 313
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
F A Y + K+ + G FV+F ++ ++ +NG L + +R+
Sbjct: 314 AF-AKYGDLASVKIPLGKQCG------FVQFASRTDAEEALQGLNGSLIGKQAVRL 362
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++++G L P + E + F G+ S K+ KQ GF++F S AE LQ
Sbjct: 295 RTVYVGGLDPNVSEDELRKAFAKYGDLASVKIPLGKQC------GFVQFASRTDAEEALQ 348
Query: 134 TFNGTQMPSTEQNFRLNW 151
NG+ + +Q RL+W
Sbjct: 349 GLNGSLI--GKQAVRLSW 364
>gi|242062048|ref|XP_002452313.1| hypothetical protein SORBIDRAFT_04g023540 [Sorghum bicolor]
gi|241932144|gb|EES05289.1| hypothetical protein SORBIDRAFT_04g023540 [Sorghum bicolor]
Length = 435
Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 136/251 (54%), Positives = 181/251 (72%), Gaps = 15/251 (5%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++W+GDLQ WM+E+Y+ S FG +GE V+ KVIRN+ + SEGYGF+EF SH +AE+ LQ
Sbjct: 109 RTIWVGDLQYWMDENYLHSCFGPSGEVVNIKVIRNRHSGVSEGYGFVEFYSHVSAEKALQ 168
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F+G MP+T++ F+LNWA+Y GE+R + D +IFVGDLA DVTD +L E F Y S
Sbjct: 169 NFSGHVMPNTDRAFKLNWASYSMGEKRTELSSDHSIFVGDLAVDVTDEMLLELFSNKYRS 228
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKV+ D TGRS+GYGFVRFGD++++ +MTEMNGV CSTRP+R+GPA +++
Sbjct: 229 VKGAKVIIDANTGRSRGYGFVRFGDDNDKTHAMTEMNGVYCSTRPIRVGPATPRRS---- 284
Query: 254 QYQKATYQNTQGS----QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAG 309
Q GS Q + D N T++VGGLDP+V++D L+ F +YG+L VKIP G
Sbjct: 285 -------QGDSGSSPPRQSDVDSTNRTVYVGGLDPNVSEDELRKAFAKYGDLASVKIPFG 337
Query: 310 KRCGFVQFANR 320
K+CGFVQF NR
Sbjct: 338 KQCGFVQFVNR 348
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++++G L P + E + F G+ S K+ KQ GF++FV+ A AE LQ
Sbjct: 303 RTVYVGGLDPNVSEDELRKAFAKYGDLASVKIPFGKQC------GFVQFVNRADAEEALQ 356
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDD 163
NG + +Q RL+W A ++ + D
Sbjct: 357 GLNGATI--GKQAVRLSWGRSPASKQSRGD 384
>gi|357149687|ref|XP_003575198.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 421
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 134/247 (54%), Positives = 180/247 (72%), Gaps = 7/247 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++W+GDLQ WM+E+Y+ S FG +GE V+ KVIRN+ + SEGYGF+EF SHA+AE+ LQ
Sbjct: 99 RTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQ 158
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F G MP+T++ F+LNWA+Y GE+R + D +IFVGDLA DVTD +L E F Y S
Sbjct: 159 NFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRS 218
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKV+ D TGRS+GYGFVRFGD++++ +MTEMNGV CSTRP+RIGPA ++ +
Sbjct: 219 VKGAKVIIDANTGRSRGYGFVRFGDDNDRTHAMTEMNGVYCSTRPIRIGPATPRRTSGDS 278
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
++ Q + D N T++VGGLDP+V++D L+ F +YG++ VKIP GK+CG
Sbjct: 279 -------GSSPPRQSDGDLTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCG 331
Query: 314 FVQFANR 320
FVQF NR
Sbjct: 332 FVQFVNR 338
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 55 PSQQTQPYGVAPDASSDGI---RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQT 111
P + + G +P SDG R++++G L P + E + F G+ S K+ KQ
Sbjct: 271 PRRTSGDSGSSPPRQSDGDLTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQC 330
Query: 112 NFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNW 151
GF++FV+ A AE LQ +G+ + +Q RL+W
Sbjct: 331 ------GFVQFVNRADAEEALQALSGSTI--GKQAVRLSW 362
>gi|357163840|ref|XP_003579863.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 428
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 134/247 (54%), Positives = 183/247 (74%), Gaps = 7/247 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++W+GDLQ WM+E+Y+ S FG +GE V+ KVIRN+QT +EGYGF+EF SHA+A++ LQ
Sbjct: 104 KTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQTEGYGFVEFYSHASADKALQ 163
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F G MP+T++ F+LNWA+Y GE+R + D +IFVGDLAADVTD +L E F + Y S
Sbjct: 164 NFTGHAMPNTDRPFKLNWASYSMGEKRSEVVSDHSIFVGDLAADVTDEMLMELFASKYRS 223
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKV+ D TGRS+GYGFVRFG++S++ R+MTEMNGV CSTRP+RIGPA ++ A
Sbjct: 224 VKGAKVIIDANTGRSRGYGFVRFGEDSDKSRAMTEMNGVYCSTRPIRIGPATPRRTA--- 280
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
++ + D N T++VGGLDP+V++D L+ F +YG++ VKIP GK+CG
Sbjct: 281 ----GDSGSSTPGHSDGDSTNRTVYVGGLDPNVSEDELRKSFAKYGDVASVKIPQGKQCG 336
Query: 314 FVQFANR 320
FVQ+ NR
Sbjct: 337 FVQYVNR 343
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++++G L P + E + F G+ S K+ + KQ GF+++V+ AE LQ
Sbjct: 298 RTVYVGGLDPNVSEDELRKSFAKYGDVASVKIPQGKQC------GFVQYVNRTDAEEALQ 351
Query: 134 TFNGTQMPSTEQNFRLNWA 152
NG+ + +Q RL+W
Sbjct: 352 GLNGSVI--GKQAVRLSWG 368
>gi|194697962|gb|ACF83065.1| unknown [Zea mays]
gi|414885795|tpg|DAA61809.1| TPA: hypothetical protein ZEAMMB73_995180 [Zea mays]
Length = 320
Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 142/236 (60%), Positives = 178/236 (75%), Gaps = 5/236 (2%)
Query: 85 MEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTE 144
M+E+Y+ S FG+TGE V+ KVIRNKQT SEGYGF+EF SHAAAE+VL+ F+G MP+T+
Sbjct: 1 MDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEGFSGHIMPNTD 60
Query: 145 QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRT 204
Q FRLNWA++ G+RR D D +IFVGDLA+DV D L E F + YSSVKGAKVV D
Sbjct: 61 QPFRLNWASFSMGDRRSDSASDHSIFVGDLASDVNDATLLEAFSSRYSSVKGAKVVIDAN 120
Query: 205 TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQ 264
TGRSKGYGFVRFGD+SE+ ++MTEMNGV CS+RPMRIGPA +K++ + ++
Sbjct: 121 TGRSKGYGFVRFGDDSEKTQAMTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSAARSDG 180
Query: 265 GSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
G D NTT+FVGGLDP+V+++ L+ F QYGE+ VKIP GK+CGFVQFA R
Sbjct: 181 G-----DLTNTTVFVGGLDPNVSEEDLRQTFSQYGEISSVKIPIGKQCGFVQFAQR 231
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + E + F GE S K+ KQ GF++F AE LQ
Sbjct: 187 TVFVGGLDPNVSEEDLRQTFSQYGEISSVKIPIGKQC------GFVQFAQRKNAEDALQG 240
Query: 135 FNGTQMPSTEQNFRLNWATYGAGER-RQDDG 164
NG+ + +QN RL+W A ++ R D+G
Sbjct: 241 LNGSTI--GKQNVRLSWGRNPANKQFRGDNG 269
>gi|50725189|dbj|BAD33940.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|51535291|dbj|BAD38554.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
Length = 316
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 141/236 (59%), Positives = 174/236 (73%), Gaps = 6/236 (2%)
Query: 85 MEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTE 144
M+E+Y+ S FG+TGE V+ KVIRNKQT SEGYGF+EF SHAAAE+VL+ F G MP+T+
Sbjct: 1 MDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEGFAGHIMPNTD 60
Query: 145 QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRT 204
Q FR+NWA++ G+RR D D +IFVGDLA+DV D L ETF YSSVKGAKVV D
Sbjct: 61 QPFRINWASFSMGDRRSDIASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDAN 120
Query: 205 TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQ 264
TGRSKGYGFVRFGD++E+ +MTEMNGV CSTRPMRIGPA +K + +
Sbjct: 121 TGRSKGYGFVRFGDDNEKTHAMTEMNGVYCSTRPMRIGPATPRKTS------GTSGPTGS 174
Query: 265 GSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
++ + D NTT+FVGGLDP+V++D L+ F QYGE+ VKIP GK+CGFVQF R
Sbjct: 175 AARSDGDLTNTTVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQR 230
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + E + F GE S K+ KQ GF++FV AE LQ
Sbjct: 186 TVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQC------GFVQFVQRKNAEDALQG 239
Query: 135 FNGTQMPSTEQNFRLNWATYGAGER-RQDDG 164
NG+ + +Q RL+W A ++ R D+G
Sbjct: 240 LNGSTI--GKQTVRLSWGRNPANKQLRSDNG 268
>gi|302760919|ref|XP_002963882.1| hypothetical protein SELMODRAFT_80061 [Selaginella moellendorffii]
gi|300169150|gb|EFJ35753.1| hypothetical protein SELMODRAFT_80061 [Selaginella moellendorffii]
Length = 332
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 149/257 (57%), Positives = 177/257 (68%), Gaps = 8/257 (3%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
+ D +RSLWIGDLQ WM+ESY+ S F + VS KVIRNK T EGYGF+EF SHAAA
Sbjct: 12 ARDDVRSLWIGDLQYWMDESYLKSCFPQS-TIVSTKVIRNKITGHHEGYGFVEFESHAAA 70
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
E+ LQ+F G MP TEQ FRLNWA G +R D G D +IFVGDLAADVTD +L ETF+
Sbjct: 71 EKALQSFTGAVMPRTEQAFRLNWACVGGDKR--DSGADDSIFVGDLAADVTDAMLLETFK 128
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ Y SVK AKVV D +GR +GYGFVRFGDE+E+ +MTEM+GV CS+RPMRI A KK
Sbjct: 129 SRYPSVKSAKVVMDVNSGRCRGYGFVRFGDETEKSSAMTEMHGVYCSSRPMRIRTATPKK 188
Query: 249 AATGQQYQKATYQ-----NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVH 303
Q+ +YQ GE+D NTTIFVGGLD +V+ D LK VF YGE+ +
Sbjct: 189 QTQQHPVQRVSYQLVPAYAMPAPAGEDDFTNTTIFVGGLDQNVSLDDLKDVFSPYGEIKY 248
Query: 304 VKIPAGKRCGFVQFANR 320
KIP G+ CGFVQF R
Sbjct: 249 TKIPPGRGCGFVQFMTR 265
>gi|212275334|ref|NP_001130489.1| uncharacterized protein LOC100191587 [Zea mays]
gi|194689276|gb|ACF78722.1| unknown [Zea mays]
Length = 417
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 137/251 (54%), Positives = 180/251 (71%), Gaps = 15/251 (5%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++W+GDLQ WM+E+Y+ S FG GE V+ KVIRN+ + SEGYGF+EF SH +AE+ LQ
Sbjct: 93 RTIWVGDLQYWMDENYLHSCFGPGGEVVNIKVIRNRHSGVSEGYGFVEFYSHVSAEKALQ 152
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F+G MP+TE+ F+LNWA+Y GE+R + PD +IFVGDLA DVTD +L E F Y S
Sbjct: 153 NFSGHVMPNTERAFKLNWASYSMGEKRSEVPPDHSIFVGDLAVDVTDEMLLELFSNKYRS 212
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKV+ D TGRS+GYGFVRFGD++++ +MTEMNGV CSTRP+R+G A +++
Sbjct: 213 VKGAKVIIDANTGRSRGYGFVRFGDDNDKTLAMTEMNGVYCSTRPIRVGLATPRRS---- 268
Query: 254 QYQKATYQNTQGS----QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAG 309
Q GS Q + D N T++VGGLDP+V++D L+ F +YG+L VKIP G
Sbjct: 269 -------QGDSGSSPPRQSDVDSTNRTVYVGGLDPNVSEDELRKAFAKYGDLASVKIPFG 321
Query: 310 KRCGFVQFANR 320
K+CGFVQF NR
Sbjct: 322 KQCGFVQFVNR 332
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++++G L P + E + F G+ S K+ KQ GF++FV+ AE LQ
Sbjct: 287 RTVYVGGLDPNVSEDELRKAFAKYGDLASVKIPFGKQC------GFVQFVNRVDAEEALQ 340
Query: 134 TFNGTQMPSTEQNFRLNWA 152
NG+ + +Q RL+W
Sbjct: 341 GLNGSTI--GKQAIRLSWG 357
>gi|302813198|ref|XP_002988285.1| hypothetical protein SELMODRAFT_447249 [Selaginella moellendorffii]
gi|300144017|gb|EFJ10704.1| hypothetical protein SELMODRAFT_447249 [Selaginella moellendorffii]
Length = 352
Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 149/257 (57%), Positives = 177/257 (68%), Gaps = 8/257 (3%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
+ D +RSLWIGDLQ WM+ESY+ S F + VS KVIRNK T EGYGF+EF SHAAA
Sbjct: 12 ARDDVRSLWIGDLQYWMDESYLKSCFPQS-TIVSTKVIRNKITGHHEGYGFVEFESHAAA 70
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
E+ LQ+F G MP TEQ FRLNWA G +R D G D +IFVGDLAADVTD +L ETF+
Sbjct: 71 EKALQSFTGAVMPRTEQAFRLNWACVGGDKR--DSGADDSIFVGDLAADVTDAMLLETFK 128
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ Y SVK AKVV D +GR +GYGFVRFGDE+E+ +MTEM+GV CS+RPMRI A KK
Sbjct: 129 SRYPSVKSAKVVMDVNSGRCRGYGFVRFGDEAEKSSAMTEMHGVYCSSRPMRIRTATPKK 188
Query: 249 AATGQQYQKATYQ-----NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVH 303
Q+ +YQ GE+D NTTIFVGGLD +V+ D LK VF YGE+ +
Sbjct: 189 QTQQHPVQRVSYQLVPAYAMPAPAGEDDFTNTTIFVGGLDQNVSLDDLKDVFSPYGEIKY 248
Query: 304 VKIPAGKRCGFVQFANR 320
KIP G+ CGFVQF R
Sbjct: 249 TKIPPGRGCGFVQFMTR 265
>gi|219888851|gb|ACL54800.1| unknown [Zea mays]
gi|414589690|tpg|DAA40261.1| TPA: hypothetical protein ZEAMMB73_589753 [Zea mays]
Length = 322
Score = 287 bits (735), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 142/236 (60%), Positives = 176/236 (74%), Gaps = 5/236 (2%)
Query: 85 MEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTE 144
M+E+Y+ + FG+TGE V+ KVIRNKQT SEGYGF+EF SHAAAERVL+ F+G MP+T+
Sbjct: 1 MDENYLHNCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAERVLEGFSGHIMPNTD 60
Query: 145 QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRT 204
Q FRLNWA++ G+RR D D +IFVGDLA+DV D L E F + YSSVKGAKVV D
Sbjct: 61 QPFRLNWASFSMGDRRSDVASDHSIFVGDLASDVNDATLLEVFSSRYSSVKGAKVVIDAN 120
Query: 205 TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQ 264
TGRSKGYGFVRFGD+SE+ +MTEMNGV CS+RPMRIGPA +K++ ++ +
Sbjct: 121 TGRSKGYGFVRFGDDSEKTHAMTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSSARPDG 180
Query: 265 GSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
G D NTT+FVGGLDP V+++ L+ F QYGE+ VKIP GK+CGFVQFA R
Sbjct: 181 G-----DLTNTTVFVGGLDPDVSEEDLRQAFSQYGEISSVKIPVGKQCGFVQFAQR 231
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
PD ++++G L P + E + F GE S K+ KQ GF++F
Sbjct: 178 PDGGDLTNTTVFVGGLDPDVSEEDLRQAFSQYGEISSVKIPVGKQC------GFVQFAQR 231
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGER-RQDDG 164
AE LQ NG+ + +Q RL+W A ++ R D+G
Sbjct: 232 KNAEDALQGLNGSTI--GKQAVRLSWGRNPANKQFRGDNG 269
>gi|125548504|gb|EAY94326.1| hypothetical protein OsI_16094 [Oryza sativa Indica Group]
Length = 426
Score = 287 bits (734), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 135/247 (54%), Positives = 182/247 (73%), Gaps = 7/247 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++W+GDLQ WM+E+Y+ S FG +GE V+ KVIRN+QT SEGYGF+EF SH +AE+ LQ
Sbjct: 104 KTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFYSHGSAEKALQ 163
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F G MP+T++ F+LNWA+Y GE+R + D++IFVGDLAADVTD +L E F Y S
Sbjct: 164 NFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDYSIFVGDLAADVTDEMLMELFANKYRS 223
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKV+ D TGRS+GYGFVRFGD++++ +MTEMNG CSTRP+RIGP AT +
Sbjct: 224 VKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMTEMNGAYCSTRPIRIGP------ATPR 277
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
+ + +T G + D N T++VGGLDP+V++D L+ F +YG++ VKIP GK+CG
Sbjct: 278 RSSGDSGSSTPG-HSDGDSTNRTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCG 336
Query: 314 FVQFANR 320
FVQF +R
Sbjct: 337 FVQFVSR 343
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++++G L P + E + F G+ S K+ KQ GF++FVS AE LQ
Sbjct: 298 RTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQC------GFVQFVSRTDAEEALQ 351
Query: 134 TFNGTQMPSTEQNFRLNW 151
NG+ + +Q RL+W
Sbjct: 352 GLNGSVI--GKQAVRLSW 367
>gi|116310076|emb|CAH67097.1| H0818E04.14 [Oryza sativa Indica Group]
Length = 426
Score = 287 bits (734), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 135/247 (54%), Positives = 182/247 (73%), Gaps = 7/247 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++W+GDLQ WM+E+Y+ S FG +GE V+ KVIRN+QT SEGYGF+EF SH +AE+ LQ
Sbjct: 104 KTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFYSHGSAEKALQ 163
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F G MP+T++ F+LNWA+Y GE+R + D++IFVGDLAADVTD +L E F Y S
Sbjct: 164 NFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDYSIFVGDLAADVTDEMLMELFANKYRS 223
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKV+ D TGRS+GYGFVRFGD++++ +MTEMNG CSTRP+RIGP AT +
Sbjct: 224 VKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMTEMNGAYCSTRPIRIGP------ATPR 277
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
+ + +T G + D N T++VGGLDP+V++D L+ F +YG++ VKIP GK+CG
Sbjct: 278 RSSGDSGSSTPG-HSDGDSTNRTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCG 336
Query: 314 FVQFANR 320
FVQF +R
Sbjct: 337 FVQFVSR 343
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++++G L P + E + F G+ S K+ KQ GF++FVS AE LQ
Sbjct: 298 RTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQC------GFVQFVSRTDAEEALQ 351
Query: 134 TFNGTQMPSTEQNFRLNW 151
NG+ + +Q RL+W
Sbjct: 352 GLNGSVI--GKQAVRLSW 367
>gi|297602825|ref|NP_001052934.2| Os04g0449900 [Oryza sativa Japonica Group]
gi|255675510|dbj|BAF14848.2| Os04g0449900 [Oryza sativa Japonica Group]
Length = 387
Score = 286 bits (733), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 135/247 (54%), Positives = 182/247 (73%), Gaps = 7/247 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++W+GDLQ WM+E+Y+ S FG +GE V+ KVIRN+QT SEGYGF+EF SH +AE+ LQ
Sbjct: 65 KTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFYSHGSAEKALQ 124
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F G MP+T++ F+LNWA+Y GE+R + D++IFVGDLAADVTD +L E F Y S
Sbjct: 125 NFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDYSIFVGDLAADVTDEMLMELFANKYRS 184
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKV+ D TGRS+GYGFVRFGD++++ +MTEMNG CSTRP+RIGP AT +
Sbjct: 185 VKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMTEMNGAYCSTRPIRIGP------ATPR 238
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
+ + +T G + D N T++VGGLDP+V++D L+ F +YG++ VKIP GK+CG
Sbjct: 239 RSSGDSGSSTPG-HSDGDSTNRTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCG 297
Query: 314 FVQFANR 320
FVQF +R
Sbjct: 298 FVQFVSR 304
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++++G L P + E + F G+ S K+ KQ GF++FVS AE LQ
Sbjct: 259 RTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQC------GFVQFVSRTDAEEALQ 312
Query: 134 TFNGTQMPSTEQNFRLNW 151
NG+ + +Q RL+W
Sbjct: 313 GLNGSVI--GKQAVRLSW 328
>gi|384244508|gb|EIE18010.1| hypothetical protein COCSUDRAFT_31894 [Coccomyxa subellipsoidea
C-169]
Length = 407
Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 139/266 (52%), Positives = 188/266 (70%), Gaps = 19/266 (7%)
Query: 72 GIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
G ++LW+GDL WM+ES+I SIF TG VS K+IRNK T SEGYGF+EF +H AAE+V
Sbjct: 9 GTKTLWMGDLAYWMDESFIYSIFVGTGNLVSVKIIRNKNTAVSEGYGFVEFATHEAAEQV 68
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
L+TFNG +P+T+Q FRLNWA +G G+ D D+++FVGDLA DVTDY LQE FR +
Sbjct: 69 LRTFNGCPIPNTDQIFRLNWAAFGVGKVTTDS--DYSVFVGDLAPDVTDYALQEHFRQFF 126
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT 251
+SV+ AKV+TD TGRSKGYGFVRFG+E+E+ RS+TEM+G + ++RP+R+ A KK+ T
Sbjct: 127 ASVRSAKVITDPLTGRSKGYGFVRFGNEAERDRSLTEMSGHVINSRPIRVSIATAKKSQT 186
Query: 252 G----QQYQKATYQN-------------TQGSQGENDPNNTTIFVGGLDPSVTDDILKTV 294
+Q Q ++N +Q + DPNNTT+F+GGL V++D L+ +
Sbjct: 187 ATMLPKQCQNFDFENFRLRVQGAPAPVASQPHPSDYDPNNTTLFIGGLSSGVSEDDLRVL 246
Query: 295 FGQYGELVHVKIPAGKRCGFVQFANR 320
FG++G++V+ KIP GK CGFVQF R
Sbjct: 247 FGRFGDIVYTKIPPGKGCGFVQFVQR 272
>gi|147856810|emb|CAN81343.1| hypothetical protein VITISV_008697 [Vitis vinifera]
Length = 536
Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 141/221 (63%), Positives = 171/221 (77%), Gaps = 5/221 (2%)
Query: 104 KVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDD 163
KVIRNKQT SEGYGF+EF SHAAAE+VLQ + G MP+T+Q FRLNWAT+ G++R D+
Sbjct: 2 KVIRNKQTGSSEGYGFVEFFSHAAAEKVLQGYAGVLMPNTDQPFRLNWATFSMGDKRSDN 61
Query: 164 GPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQL 223
GPD +IFVGDLA+DV+D +L ETF Y SVK AKVV D TGRSKGYGFVRFGDE+E+
Sbjct: 62 GPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERS 121
Query: 224 RSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATY----QNTQGSQGENDPNNTTIFV 279
++MTEMNGV CS+RPMRIG AAT + ++G Q Q +++ N Q + D NTTIFV
Sbjct: 122 QAMTEMNGVYCSSRPMRIG-AATPRKSSGYQQQYSSHGGYASNGASVQSDGDSMNTTIFV 180
Query: 280 GGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
GGLDP+V+D+ L+ F QYGE+V VKIP GK CGFVQFANR
Sbjct: 181 GGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANR 221
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 25/185 (13%)
Query: 75 SLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL + +S + F G + KV+ + T S+GYGF+ F + +
Sbjct: 66 SIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMT 125
Query: 134 TFNGTQM-----------PSTEQNFRLNWATYGA----GERRQDDGPDF--TIFVGDLAA 176
NG P ++ ++++G G Q DG TIFVG L
Sbjct: 126 EMNGVYCSSRPMRIGAATPRKSSGYQQQYSSHGGYASNGASVQSDGDSMNTTIFVGGLDP 185
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+V+D L++ F + Y + K+ KG GFV+F + + ++ ++NG +
Sbjct: 186 NVSDEDLRQPF-SQYGEIVSVKIPV------GKGCGFVQFANRNNAEDALQKLNGTVIGK 238
Query: 237 RPMRI 241
+ +R+
Sbjct: 239 QTVRL 243
>gi|194703366|gb|ACF85767.1| unknown [Zea mays]
Length = 420
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 135/247 (54%), Positives = 184/247 (74%), Gaps = 8/247 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++W+GDLQ WM+E+Y+ + FG +GE V+ KVIRN+QT SEGYGF+EF SHA+AE+ LQ
Sbjct: 99 KTIWVGDLQYWMDENYLHNCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASAEKALQ 158
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F G MP+T++ F+LNWA+Y GE+R + D +IFVGDLAADVTD +L E F + Y S
Sbjct: 159 NFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDHSIFVGDLAADVTDEMLLELFSSKYRS 218
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKV+ D TGRS+GYGFVRFGD++++ +M+EMNGV CSTRP+RIGP AT +
Sbjct: 219 VKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMSEMNGVYCSTRPIRIGP------ATPR 272
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
+ + +T G + D +N T++VGGLDP+V++D L+ F +Y +L VKIP GK+CG
Sbjct: 273 RSSGDSGSSTPG-HSDGDSSNRTVYVGGLDPNVSEDELRKAFAKY-DLASVKIPLGKQCG 330
Query: 314 FVQFANR 320
FVQF +R
Sbjct: 331 FVQFVSR 337
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 75/177 (42%), Gaps = 20/177 (11%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL + + + +F V G KVI + T S GYGF+ F +
Sbjct: 193 SIFVGDLAADVTDEMLLELFSSKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMS 252
Query: 134 TFNGTQM--------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
NG P+T + + + G D + T++VG L +V++ L++
Sbjct: 253 EMNGVYCSTRPIRIGPATPRRSSGDSGSSTPGHS-DGDSSNRTVYVGGLDPNVSEDELRK 311
Query: 186 TF-RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
F + +SVK K GFV+F ++ ++ +NG L + +R+
Sbjct: 312 AFAKYDLASVK---------IPLGKQCGFVQFVSRTDAEEALQGLNGSLIGKQAVRL 359
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++++G L P + E + F + S K+ KQ GF++FVS AE LQ
Sbjct: 293 RTVYVGGLDPNVSEDELRKAFAKY-DLASVKIPLGKQC------GFVQFVSRTDAEEALQ 345
Query: 134 TFNGTQMPSTEQNFRLNW 151
NG+ + +Q RL+W
Sbjct: 346 GLNGSLI--GKQAVRLSW 361
>gi|226495169|ref|NP_001150649.1| nucleic acid binding protein [Zea mays]
gi|195640856|gb|ACG39896.1| nucleic acid binding protein [Zea mays]
Length = 420
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 135/247 (54%), Positives = 184/247 (74%), Gaps = 8/247 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++W+GDLQ WM+E+Y+ + FG +GE V+ KVIRN+QT SEGYGF+EF SHA+AE+ LQ
Sbjct: 99 KTIWVGDLQYWMDENYLHNCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASAEKALQ 158
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F G MP+T++ F+LNWA+Y GE+R + D +IFVGDLAADVTD +L E F + Y S
Sbjct: 159 NFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDHSIFVGDLAADVTDEMLLELFSSKYRS 218
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKV+ D TGRS+GYGFVRFGD++++ +M+EMNGV CSTRP+RIGP AT +
Sbjct: 219 VKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMSEMNGVYCSTRPIRIGP------ATPR 272
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
+ + +T G + D +N T++VGGLDP+V++D L+ F +Y +L VKIP GK+CG
Sbjct: 273 RSSGDSGSSTPG-HSDGDSSNRTVYVGGLDPNVSEDELRKAFAKY-DLASVKIPLGKQCG 330
Query: 314 FVQFANR 320
FVQF +R
Sbjct: 331 FVQFVSR 337
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 75/177 (42%), Gaps = 20/177 (11%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL + + + +F V G KVI + T S GYGF+ F +
Sbjct: 193 SIFVGDLAADVTDEMLLELFSSKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMS 252
Query: 134 TFNGTQM--------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
NG P+T + + + G D + T++VG L +V++ L++
Sbjct: 253 EMNGVYCSTRPIRIGPATPRRSSGDSGSSTPGHS-DGDSSNRTVYVGGLDPNVSEDELRK 311
Query: 186 TF-RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
F + +SVK K GFV+F ++ ++ +NG L + +R+
Sbjct: 312 AFAKYDLASVK---------IPLGKQCGFVQFVSRTDAEEALQGLNGSLIGKQAVRL 359
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++++G L P + E + F + S K+ KQ GF++FVS AE LQ
Sbjct: 293 RTVYVGGLDPNVSEDELRKAFAKY-DLASVKIPLGKQC------GFVQFVSRTDAEEALQ 345
Query: 134 TFNGTQMPSTEQNFRLNWA 152
NG+ + +Q RL+W
Sbjct: 346 GLNGSLI--GKQAVRLSWV 362
>gi|195620484|gb|ACG32072.1| nucleic acid binding protein [Zea mays]
gi|195625400|gb|ACG34530.1| nucleic acid binding protein [Zea mays]
Length = 369
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 135/247 (54%), Positives = 184/247 (74%), Gaps = 8/247 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++W+GDLQ WM+E+Y+ + FG +GE V+ KVIRN+QT SEGYGF+EF SHA+AE+ LQ
Sbjct: 48 KTIWVGDLQYWMDENYLHNCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASAEKALQ 107
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F G MP+T++ F+LNWA+Y GE+R + D +IFVGDLAADVTD +L E F + Y S
Sbjct: 108 NFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDHSIFVGDLAADVTDEMLLELFSSKYRS 167
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKV+ D TGRS+GYGFVRFGD++++ +M+EMNGV CSTRP+RIGP AT +
Sbjct: 168 VKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMSEMNGVYCSTRPIRIGP------ATPR 221
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
+ + +T G + D +N T++VGGLDP+V++D L+ F +Y +L VKIP GK+CG
Sbjct: 222 RSSGDSGSSTPG-HSDGDSSNRTVYVGGLDPNVSEDELRKAFAKY-DLASVKIPLGKQCG 279
Query: 314 FVQFANR 320
FVQF +R
Sbjct: 280 FVQFVSR 286
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 75/177 (42%), Gaps = 20/177 (11%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL + + + +F V G KVI + T S GYGF+ F +
Sbjct: 142 SIFVGDLAADVTDEMLLELFSSKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMS 201
Query: 134 TFNGTQM--------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
NG P+T + + + G D + T++VG L +V++ L++
Sbjct: 202 EMNGVYCSTRPIRIGPATPRRSSGDSGSSTPGHS-DGDSSNRTVYVGGLDPNVSEDELRK 260
Query: 186 TF-RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
F + +SVK K GFV+F ++ ++ +NG L + +R+
Sbjct: 261 AFAKYDLASVK---------IPLGKQCGFVQFVSRTDAEEALQGLNGSLIGKQAVRL 308
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++++G L P + E + F + S K+ KQ GF++FVS AE LQ
Sbjct: 242 RTVYVGGLDPNVSEDELRKAFAKY-DLASVKIPLGKQC------GFVQFVSRTDAEEALQ 294
Query: 134 TFNGTQMPSTEQNFRLNWA 152
NG+ + +Q RL+W
Sbjct: 295 GLNGSLI--GKQAVRLSWV 311
>gi|297737424|emb|CBI26625.3| unnamed protein product [Vitis vinifera]
Length = 194
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 135/174 (77%), Positives = 147/174 (84%)
Query: 85 MEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTE 144
MEE+Y+ F TGE VS KVIRNKQT EGYGFIE + AAAER+LQT+NGT MP++E
Sbjct: 1 MEENYLWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELATRAAAERILQTYNGTLMPNSE 60
Query: 145 QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRT 204
QNFRLNWAT GAGERR DD PD+TIFVGDLA+DVTDYVLQETFR Y SVKGAKVVTDRT
Sbjct: 61 QNFRLNWATLGAGERRADDTPDYTIFVGDLASDVTDYVLQETFRGHYPSVKGAKVVTDRT 120
Query: 205 TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKA 258
TGRSKGYGFVRFGDE EQLR+M EMNG+ CSTRPMRIGPAATKK GQQ+QK
Sbjct: 121 TGRSKGYGFVRFGDEGEQLRAMNEMNGMFCSTRPMRIGPAATKKPVGGQQFQKG 174
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 56/135 (41%), Gaps = 25/135 (18%)
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLC--STRPMRIGPAATKKAAT 251
V KV+ ++ TG+ +GYGF+ + R + NG L S + R+ A
Sbjct: 16 VVSVKVIRNKQTGQCEGYGFIELATRAAAERILQTYNGTLMPNSEQNFRLNWATLGA--- 72
Query: 252 GQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVF-GQYGELVHVKIPA-- 308
G + +D + TIFVG L VTD +L+ F G Y + K+
Sbjct: 73 -------------GERRADDTPDYTIFVGDLASDVTDYVLQETFRGHYPSVKGAKVVTDR 119
Query: 309 ----GKRCGFVQFAN 319
K GFV+F +
Sbjct: 120 TTGRSKGYGFVRFGD 134
>gi|147781769|emb|CAN74486.1| hypothetical protein VITISV_029928 [Vitis vinifera]
Length = 434
Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 149/286 (52%), Positives = 181/286 (63%), Gaps = 34/286 (11%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQ-TNFSEGYGF-IE----- 121
S+D I++LW+GDL WM+++Y+ + FGHTGE++ IR+ N +GF IE
Sbjct: 73 STDEIKTLWVGDLHQWMDDNYLRTCFGHTGEWLFVMCIRHIYFINRLLVFGFSIEVLYIV 132
Query: 122 ----------------FVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
F E ++NGT MP+TEQ FRLNWAT+ G+RR D G
Sbjct: 133 KSFKIYEWIWLWAGDVFHELGILENFXHSYNGTLMPNTEQPFRLNWATFSTGDRRTDAGS 192
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
D +IFVGDLA+DVTD +LQETF Y SVKGAKVVTD TGRSKGYGFVRFGDE+E+ R+
Sbjct: 193 DLSIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRA 252
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQY-----------QKATYQNTQGSQGENDPNN 274
M EMNG+ CS+RPMRIG A KKA+ QQ + QGSQ D N
Sbjct: 253 MNEMNGIYCSSRPMRIGVATPKKASGYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTN 312
Query: 275 TTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
TTIFVGGLD VTD+ L+ F Q+GE+V VKIP GK CGFVQFANR
Sbjct: 313 TTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVGKGCGFVQFANR 358
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 87/201 (43%), Gaps = 35/201 (17%)
Query: 67 DASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSH 125
DA SD S+++GDL + ++ + F V G KV+ + T S+GYGF+ F
Sbjct: 189 DAGSD--LSIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDE 246
Query: 126 AAAERVLQTFNGTQMPS--------------------TEQNFRL--NWATYGA---GERR 160
R + NG S + Q L A+ GA G +
Sbjct: 247 NERSRAMNEMNGIYCSSRPMRIGVATPKKASGYQQQYSSQALVLAGGNASNGAVAQGSQA 306
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
D + TIFVG L ++VTD L+++F + + V K+ KG GFV+F + +
Sbjct: 307 NGDSTNTTIFVGGLDSEVTDEDLRQSF-SQFGEVVSVKIPV------GKGCGFVQFANRN 359
Query: 221 EQLRSMTEMNGVLCSTRPMRI 241
++ +NG + + +R+
Sbjct: 360 SAEDALQRLNGTVIGKQTVRL 380
>gi|84453184|dbj|BAE71189.1| putative DNA binding protein [Trifolium pratense]
Length = 253
Score = 276 bits (706), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 128/183 (69%), Positives = 149/183 (81%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
++D +R+LWIGDLQ WM+E+Y+ F HTGE + KVIRNKQTN SEGYGF+EF S A A
Sbjct: 63 TADEVRTLWIGDLQYWMDENYLYQCFSHTGEVGNVKVIRNKQTNQSEGYGFLEFTSRAGA 122
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
ER+LQ +NG MP+ QNFRLNWAT+ +GE+R DD PDFTIFVGDLAADVTDY L E FR
Sbjct: 123 ERILQQYNGNIMPNGGQNFRLNWATFSSGEKRHDDSPDFTIFVGDLAADVTDYHLTEVFR 182
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
Y+SVKGAKVV DRTTGR+KGYGFVRF DE EQ+R+M+EM GVLCSTRPMRIGPA+ K
Sbjct: 183 TRYNSVKGAKVVIDRTTGRTKGYGFVRFADEGEQMRAMSEMQGVLCSTRPMRIGPASNKN 242
Query: 249 AAT 251
T
Sbjct: 243 LNT 245
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 22/159 (13%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++GDL + + L + F V KV+ ++ T +S+GYGF+ F + R +
Sbjct: 69 TLWIGDLQYWMDENYLYQCFSHT-GEVGNVKVIRNKQTNQSEGYGFLEFTSRAGAERILQ 127
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+ NG I P GQ ++ + G + +D + TIFVG L VT
Sbjct: 128 QYNG--------NIMPNG------GQNFRLNWATFSSGEKRHDDSPDFTIFVGDLAADVT 173
Query: 288 DDILKTVF-GQYGELVHVKIPAG------KRCGFVQFAN 319
D L VF +Y + K+ K GFV+FA+
Sbjct: 174 DYHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRFAD 212
>gi|218202287|gb|EEC84714.1| hypothetical protein OsI_31675 [Oryza sativa Indica Group]
Length = 377
Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 134/228 (58%), Positives = 165/228 (72%), Gaps = 6/228 (2%)
Query: 93 IFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWA 152
+FG + V+ KVIRNKQT SEGYGF+EF SHAAAE+VL+ F G MP+T+Q FR+NWA
Sbjct: 70 MFGLMCQVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEGFAGHIMPNTDQPFRINWA 129
Query: 153 TYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYG 212
++ G+RR D D +IFVGDLA+DV D L ETF YSSVKGAKVV D TGRSKGYG
Sbjct: 130 SFSMGDRRSDIASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYG 189
Query: 213 FVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDP 272
FVRFGD++E+ +MTEMNGV CSTRPMRIGPA +K + + ++ + D
Sbjct: 190 FVRFGDDNEKTHAMTEMNGVYCSTRPMRIGPATPRKTS------GTSGPTGSAARSDGDL 243
Query: 273 NNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
NTT+FVGGLDP+V++D L+ F QYGE+ VKIP GK+CGFVQF R
Sbjct: 244 TNTTVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQR 291
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + E + F GE S K+ KQ GF++FV AE LQ
Sbjct: 247 TVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQC------GFVQFVQRKNAEDALQG 300
Query: 135 FNGTQMPSTEQNFRLNWATYGAGER-RQDDG 164
NG+ + +Q RL+W A ++ R D+G
Sbjct: 301 LNGSTI--GKQTVRLSWGRNPANKQLRSDNG 329
>gi|297791731|ref|XP_002863750.1| hypothetical protein ARALYDRAFT_331131 [Arabidopsis lyrata subsp.
lyrata]
gi|297309585|gb|EFH40009.1| hypothetical protein ARALYDRAFT_331131 [Arabidopsis lyrata subsp.
lyrata]
Length = 400
Score = 271 bits (692), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 134/254 (52%), Positives = 166/254 (65%), Gaps = 25/254 (9%)
Query: 67 DASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHA 126
+AS+ +++W+GDL WM+E+Y+ S F GE S KVIRNK T +EGYGF+EFVSH
Sbjct: 84 NASNTENKTIWVGDLLHWMDENYLNSSFSSAGEISSVKVIRNKHTGLTEGYGFVEFVSHD 143
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQET 186
AE+VLQ NG M + EQ FRLNWA++ GE+R ++GPD +IFVGDLA +VTD +L++
Sbjct: 144 VAEKVLQELNGEAMLNAEQPFRLNWASFSTGEKRLENGPDLSIFVGDLAPEVTDTMLEQI 203
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
F Y SVK AKVV D TGRSKGYGFVRFGD+SE+ ++M EMNGV C R MRIGPA
Sbjct: 204 FSEKYPSVKNAKVVIDGNTGRSKGYGFVRFGDDSERSKAMLEMNGVKCCGRAMRIGPATP 263
Query: 247 KKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
+K + Q GLD SVTDD L+ F YGE+V VKI
Sbjct: 264 RKPSGYHQQ-------------------------GLDSSVTDDDLRQPFAGYGEIVSVKI 298
Query: 307 PAGKRCGFVQFANR 320
P GK CGF+QF NR
Sbjct: 299 PVGKGCGFIQFVNR 312
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 19/168 (11%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL P + ++ + IF V + KV+ + T S+GYGF+ F + + +
Sbjct: 185 SIFVGDLAPEVTDTMLEQIFSEKYPSVKNAKVVIDGNTGRSKGYGFVRFGDDSERSKAML 244
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG + + R+ AT G D + VTD L++ F A Y
Sbjct: 245 EMNGVK--CCGRAMRIGPATPRKPSGYHQQGLD---------SSVTDDDLRQPF-AGYGE 292
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
+ K+ KG GF++F + ++ ++NG + + +R+
Sbjct: 293 IVSVKIPV------GKGCGFIQFVNRENAEEALEKLNGSMIGKQTVRL 334
>gi|218191015|gb|EEC73442.1| hypothetical protein OsI_07730 [Oryza sativa Indica Group]
Length = 312
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 126/236 (53%), Positives = 168/236 (71%), Gaps = 7/236 (2%)
Query: 85 MEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTE 144
M+E Y+ + FG +GE V+ KVIRN+ + SEGYGF+EF SHA+AE+ LQ F+G MP+T+
Sbjct: 1 MDEGYLHNCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFFSHASAEKALQNFSGHVMPNTD 60
Query: 145 QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRT 204
+ F+LNWA+Y GE+R + D +IFVGDLA DVTD +L + F Y SVKGAKV+ D
Sbjct: 61 RAFKLNWASYSMGEKRSELASDHSIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKVIIDAN 120
Query: 205 TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQ 264
TGRS+GYGFVRFGD++++ +MTEMNG CSTRP+RIGPA ++++
Sbjct: 121 TGRSRGYGFVRFGDDNDKTHAMTEMNGAYCSTRPIRIGPATPRRSSGDSGSSPP------ 174
Query: 265 GSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
Q ++D N TI+VGGLDP+ T+D L+ F +YG+L VKIP GK+CGFVQF NR
Sbjct: 175 -RQSDSDSTNRTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQCGFVQFVNR 229
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++++G L P E + F G+ S K+ KQ GF++FV+ AE LQ
Sbjct: 184 RTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQC------GFVQFVNRPDAEEALQ 237
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDD 163
NG+ + +Q RL+W A ++ + D
Sbjct: 238 GLNGSTI--GKQAVRLSWGRSPASKQSRGD 265
>gi|222641726|gb|EEE69858.1| hypothetical protein OsJ_29658 [Oryza sativa Japonica Group]
Length = 310
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 132/222 (59%), Positives = 162/222 (72%), Gaps = 6/222 (2%)
Query: 99 EFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGE 158
+ V+ KVIRNKQT SEGYGF+EF SHAAAE+VL+ F G MP+T+Q FR+NWA++ G+
Sbjct: 9 QVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEGFAGHIMPNTDQPFRINWASFSMGD 68
Query: 159 RRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGD 218
RR D D +IFVGDLA+DV D L ETF YSSVKGAKVV D TGRSKGYGFVRFGD
Sbjct: 69 RRSDIASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGD 128
Query: 219 ESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIF 278
++E+ +MTEMNGV CSTRPMRIGPA +K + + ++ + D NTT+F
Sbjct: 129 DNEKTHAMTEMNGVYCSTRPMRIGPATPRKTS------GTSGPTGSAARSDGDLTNTTVF 182
Query: 279 VGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
VGGLDP+V++D L+ F QYGE+ VKIP GK+CGFVQF R
Sbjct: 183 VGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQR 224
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + E + F GE S K+ KQ GF++FV AE LQ
Sbjct: 180 TVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQC------GFVQFVQRKNAEDALQG 233
Query: 135 FNGTQMPSTEQNFRLNWATYGAGER-RQDDG 164
NG+ + +Q RL+W A ++ R D+G
Sbjct: 234 LNGSTI--GKQTVRLSWGRNPANKQLRSDNG 262
>gi|125586872|gb|EAZ27536.1| hypothetical protein OsJ_11491 [Oryza sativa Japonica Group]
Length = 257
Score = 266 bits (680), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 126/184 (68%), Positives = 148/184 (80%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +R+LWIGDLQ WMEE+Y+ + F GE +S K+IRNKQT EGYGFIEF SHA AE+
Sbjct: 64 DEVRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQ 123
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
VLQ +NG MP+ Q F+LNWAT GAGE+R DDG D+TIFVGDLA+DVTD +LQ+TF+A
Sbjct: 124 VLQGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAH 183
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVKGAKVV DR+TGRSKGYGFV+FGD EQ R+MTEMNG CS+RPMRIGPA+ KK
Sbjct: 184 YQSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKNI 243
Query: 251 TGQQ 254
GQQ
Sbjct: 244 GGQQ 247
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 24/160 (15%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++GDL + + L F + AK++ ++ TG+ +GYGF+ FG + + +
Sbjct: 68 TLWIGDLQFWMEENYLYNCFSQA-GELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVLQ 126
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNT-QGSQGENDPNNTTIFVGGLDPSV 286
NG + G Q K + + G + +D ++ TIFVG L V
Sbjct: 127 GYNGQMMPN---------------GNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDV 171
Query: 287 TDDILKTVF-GQYGELVHVKI------PAGKRCGFVQFAN 319
TD IL+ F Y + K+ K GFV+F +
Sbjct: 172 TDLILQDTFKAHYQSVKGAKVVFDRSTGRSKGYGFVKFGD 211
>gi|255073999|ref|XP_002500674.1| predicted protein [Micromonas sp. RCC299]
gi|226515937|gb|ACO61932.1| predicted protein [Micromonas sp. RCC299]
Length = 440
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 141/261 (54%), Positives = 173/261 (66%), Gaps = 8/261 (3%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++LW+GDL WMEESY+ + F H G S K+IRNKQT FSEGYGF+EFV A
Sbjct: 7 AETGEVKTLWVGDLGYWMEESYLHTCFAHFGAIGSVKIIRNKQTGFSEGYGFVEFVDRAT 66
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP---DFTIFVGDLAADVTDYVLQ 184
AE L+T NGT MPS QNFRLNWA++G G G D ++FVGDL +V DY LQ
Sbjct: 67 AEHALKTLNGTPMPSAHQNFRLNWASFGVGGGAGGAGGAANDHSVFVGDLPPEVNDYALQ 126
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
ETF Y SV+ A+VVTD TGRSKG+GFVRFGDE E+ R++ EMNGV C +R MRI A
Sbjct: 127 ETFAERYPSVRNARVVTDPNTGRSKGFGFVRFGDEGERDRALVEMNGVPCGSRVMRISLA 186
Query: 245 ATKKAATGQQYQKATYQNTQGSQGEN-----DPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
+K G GS G +P N+T+FVGGLDP++T+ L+T F +G
Sbjct: 187 IPRKGVDGVGGGGVGSNTGVGSNGVGGSPAPEPENSTVFVGGLDPTLTEPDLRTHFEAFG 246
Query: 300 ELVHVKIPAGKRCGFVQFANR 320
ELV+VKIPAGK CGFVQF R
Sbjct: 247 ELVYVKIPAGKGCGFVQFTRR 267
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + E + + F GE V K+ K G GF++F A AE +Q
Sbjct: 223 TVFVGGLDPTLTEPDLRTHFEAFGELVYVKIPAGK------GCGFVQFTRRADAEASIQA 276
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
NGT M ++ RL+W G G + GP
Sbjct: 277 LNGTMMGASR--VRLSWVRSGGGGGGRHTGP 305
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 77/189 (40%), Gaps = 31/189 (16%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL P + + + F V + +V+ + T S+G+GF+ F +R L
Sbjct: 110 SVFVGDLPPEVNDYALQETFAERYPSVRNARVVTDPNTGRSKGFGFVRFGDEGERDRALV 169
Query: 134 TFNGTQMPSTEQNFRLNWAT---------------------YGAGERRQDDGPDFTIFVG 172
NG +P + R++ A G G + + T+FVG
Sbjct: 170 EMNG--VPCGSRVMRISLAIPRKGVDGVGGGGVGSNTGVGSNGVGGSPAPEPENSTVFVG 227
Query: 173 DLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGV 232
L +T+ L+ F A G V G KG GFV+F ++ S+ +NG
Sbjct: 228 GLDPTLTEPDLRTHFEAF-----GELVYVKIPAG--KGCGFVQFTRRADAEASIQALNGT 280
Query: 233 LCSTRPMRI 241
+ +R+
Sbjct: 281 MMGASRVRL 289
>gi|413921125|gb|AFW61057.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 322
Score = 263 bits (672), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 144/245 (58%), Positives = 173/245 (70%), Gaps = 15/245 (6%)
Query: 26 YQQQSQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDG--------IRSLW 77
Y Q Q + +PPP Q PPP Q YG P ++ +R+LW
Sbjct: 67 YGQAPPPPQAAYGQALPPPQAAYGQAPPPP--QAAYYGAVPAPAAVAAAPVGPSEVRTLW 124
Query: 78 IGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNG 137
IGDLQ WM+++YI F TGE + K+IR+K T +GYGFIEF+S AAAERVLQT+NG
Sbjct: 125 IGDLQYWMDDNYIYGCFASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAAERVLQTYNG 184
Query: 138 TQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGA 197
T MP+ E FRLNWA+ AGE+R DD PD+TIFVGDLAADVTDYVLQETFRA Y SVKGA
Sbjct: 185 TMMPNVELPFRLNWAS--AGEKR-DDTPDYTIFVGDLAADVTDYVLQETFRAHYPSVKGA 241
Query: 198 KVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ--Y 255
KVVTD+ T R+KGYGFV+FGD +EQ R+MTEMNG+LCS+RPMRIGPAA KKA Q+ Y
Sbjct: 242 KVVTDKLTMRTKGYGFVKFGDPNEQARAMTEMNGMLCSSRPMRIGPAANKKATVVQEKGY 301
Query: 256 QKATY 260
Q+A +
Sbjct: 302 QQALH 306
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 25/159 (15%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++GDL + D + F A V+ K++ D+ TG+ +GYGF+ F + R +
Sbjct: 122 TLWIGDLQYWMDDNYIYGCF-ASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAAERVLQ 180
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
NG + + P A+ G++ +D + TIFVG L VT
Sbjct: 181 TYNGTMMPNVEL---PFRLNWASAGEK--------------RDDTPDYTIFVGDLAADVT 223
Query: 288 DDILKTVF-GQYGELVHVKIPAGKRC------GFVQFAN 319
D +L+ F Y + K+ K GFV+F +
Sbjct: 224 DYVLQETFRAHYPSVKGAKVVTDKLTMRTKGYGFVKFGD 262
>gi|357116772|ref|XP_003560152.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 470
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/282 (51%), Positives = 175/282 (62%), Gaps = 47/282 (16%)
Query: 65 APDASSDGIRSLWIGDLQPWMEESYIASIFGHTG--EFVSGKVIRNKQTNFSEGYGFIEF 122
P + IRSLWIGDLQ WM+E+Y+ + F G + S K+IRNKQT EGYGFIEF
Sbjct: 105 GPAPGGEDIRSLWIGDLQYWMDEAYLHNAFAPMGPQQVASVKIIRNKQTGQPEGYGFIEF 164
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYV 182
S AAAE L +FNG MP+ + F+LNWA+ AG+RR DDG D TIFVGDL
Sbjct: 165 HSRAAAEYALASFNGHAMPNVDLPFKLNWASASAGDRRGDDGSDHTIFVGDL-------- 216
Query: 183 LQETFRAVYSSVK---------------------GAKVVTDRTTGRSKGYGFVRFGDESE 221
GA VVTDR TGRSKGYGFVRFGD +E
Sbjct: 217 -------------ASDVTDSMLQEIFKASYPSVRGANVVTDRATGRSKGYGFVRFGDVNE 263
Query: 222 QLRSMTEMNGVLCSTRPMRIGPAATKK-AATGQQYQKATY--QNTQGSQGENDPNNTTIF 278
Q R+MTEMNGV S+R +RIGPAA KK T Q Y Y Q++QG+ +NDPNNTTIF
Sbjct: 264 QTRAMTEMNGVTLSSRQLRIGPAANKKNMGTQQTYSTNGYQSQSSQGNDVQNDPNNTTIF 323
Query: 279 VGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
VGGLD ++ ++ L+ VF YGE+ +VKIP GKRCGFVQF +R
Sbjct: 324 VGGLDSNIDENYLRQVFTPYGEVGYVKIPVGKRCGFVQFTSR 365
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L ++E+Y+ +F GE K+ K+ GF++F S + AE +
Sbjct: 321 TIFVGGLDSNIDENYLRQVFTPYGEVGYVKIPVGKRC------GFVQFTSRSCAEEAINA 374
Query: 135 FNGTQMPSTEQNFRLNWA 152
NGT P N RL+W
Sbjct: 375 LNGT--PIGGNNVRLSWG 390
>gi|356557398|ref|XP_003547003.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 404
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 138/252 (54%), Positives = 171/252 (67%), Gaps = 17/252 (6%)
Query: 81 LQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQM 140
L+ ++E+Y++ F GE VS K+IRN+ T EGYGF+EFVSHA AERVLQT+N
Sbjct: 11 LRTAVDEAYLSHCFAPAGEVVSIKIIRNELTGQPEGYGFVEFVSHATAERVLQTYN---- 66
Query: 141 PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVV 200
+T+Q FRLNWA++G GERR D + +IFVGDLA D+TDY+LQE FRA Y SV+GAKVV
Sbjct: 67 -ATDQTFRLNWASFGIGERRPDAALEHSIFVGDLAPDITDYLLQEMFRAHYPSVRGAKVV 125
Query: 201 TDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKA-- 258
+D TGRSKGYGFV+F DE+E+ R+MTEMNGV CSTRPMRI A KK + A
Sbjct: 126 SDPNTGRSKGYGFVKFSDENERNRAMTEMNGVYCSTRPMRISAATPKKTTSAYAAPAAPV 185
Query: 259 ----------TYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA 308
T Q E D NNT IFVG LD +V+++ LK F Q+GE+V VK+ +
Sbjct: 186 PKPVYPVPAYTAPVVQVQPPEYDVNNTAIFVGNLDLNVSEEELKQNFLQFGEIVSVKVQS 245
Query: 309 GKRCGFVQFANR 320
GK CGFVQF R
Sbjct: 246 GKGCGFVQFGTR 257
>gi|222623094|gb|EEE57226.1| hypothetical protein OsJ_07197 [Oryza sativa Japonica Group]
Length = 459
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 126/238 (52%), Positives = 163/238 (68%), Gaps = 15/238 (6%)
Query: 98 GEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAG 157
G+ V+ KVIRN+ + SEGYGF+EF SHA+AE+ LQ F+G MP+T++ F+LNWA+Y G
Sbjct: 139 GKVVTIKVIRNRHSGVSEGYGFVEFFSHASAEKALQNFSGHVMPNTDRAFKLNWASYSMG 198
Query: 158 ERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFG 217
E+R + D +IFVGDLA DVTD +L + F Y SVKGAKV+ D TGRS+GYGFVRFG
Sbjct: 199 EKRAELASDHSIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKVIIDANTGRSRGYGFVRFG 258
Query: 218 DESEQLRSMTEMNGVLCSTRPMRIGPAA------TKKAATGQQYQK-----ATYQNTQGS 266
D++++ +MTEMNG CSTRP+RIGPA T +A G + Y GS
Sbjct: 259 DDNDKTHAMTEMNGAYCSTRPIRIGPATPRDLQPTSASAYGLVAKARANIWGEYVGDSGS 318
Query: 267 ----QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
Q ++D N TI+VGGLDP+ T+D L+ F +YG+L VKIP GK+CGFVQF NR
Sbjct: 319 SPPRQSDSDSTNRTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQCGFVQFVNR 376
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++++G L P E + F G+ S K+ KQ GF++FV+ AE LQ
Sbjct: 331 RTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQC------GFVQFVNRPDAEEALQ 384
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDD 163
NG+ + +Q RL+W A ++ + D
Sbjct: 385 GLNGSTI--GKQAVRLSWGRSPASKQSRGD 412
>gi|222628961|gb|EEE61093.1| hypothetical protein OsJ_14988 [Oryza sativa Japonica Group]
Length = 373
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 121/222 (54%), Positives = 161/222 (72%), Gaps = 7/222 (3%)
Query: 99 EFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGE 158
+ V+ KVIRN+QT SEGYGF+EF SH +AE+ LQ F G MP+T++ F+LNWA+Y GE
Sbjct: 76 KVVTIKVIRNRQTGQSEGYGFVEFYSHGSAEKALQNFTGHVMPNTDRPFKLNWASYSMGE 135
Query: 159 RRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGD 218
+R + D++IFVGDLAADVTD +L E F Y SVKGAKV+ D TGRS+GYGFVRFGD
Sbjct: 136 KRSEVASDYSIFVGDLAADVTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGD 195
Query: 219 ESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIF 278
++++ +MTEMNG CSTRP+RIGP AT ++ + +T G + D N T++
Sbjct: 196 DNDKSHAMTEMNGAYCSTRPIRIGP------ATPRRSSGDSGSSTPG-HSDGDSTNRTVY 248
Query: 279 VGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
VGGLDP+V++D L+ F +YG++ VKIP GK+CGFVQF +R
Sbjct: 249 VGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSR 290
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++++G L P + E + F G+ S K+ KQ GF++FVS AE LQ
Sbjct: 245 RTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQC------GFVQFVSRTDAEEALQ 298
Query: 134 TFNGTQMPSTEQNFRLNW 151
NG+ + +Q RL+W
Sbjct: 299 GLNGSVI--GKQAVRLSW 314
>gi|34395215|dbj|BAC83714.1| RNA Binding Protein-like [Oryza sativa Japonica Group]
gi|50508741|dbj|BAD31317.1| RNA Binding Protein-like [Oryza sativa Japonica Group]
Length = 206
Score = 247 bits (630), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 125/191 (65%), Positives = 145/191 (75%), Gaps = 2/191 (1%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVS 124
P D IRSLWIGDLQ WM+ESY+++ F G+ V S KVIRNKQ+ SEGYGFIEF S
Sbjct: 5 PAPGGDEIRSLWIGDLQYWMDESYLSNAFAPMGQQVTSVKVIRNKQSGHSEGYGFIEFQS 64
Query: 125 HAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQ-DDGPDFTIFVGDLAADVTDYVL 183
HAAAE L FNG M + +Q F+LNWA+ GAGERR DDGP+ TIFVGDLA+DVTD +L
Sbjct: 65 HAAAEYALANFNGRMMLNVDQLFKLNWASSGAGERRAADDGPEHTIFVGDLASDVTDSML 124
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+E F+ Y SV+GAKVV D+ TGRSKGYGFVRFGDE+EQ R+MTEMNG STR MR+GP
Sbjct: 125 EEAFKTSYPSVRGAKVVFDKVTGRSKGYGFVRFGDENEQTRAMTEMNGATLSTRQMRLGP 184
Query: 244 AATKKAATGQQ 254
AA KK QQ
Sbjct: 185 AANKKNMGTQQ 195
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 24/161 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + L F + V KV+ ++ +G S+GYGF+ F + ++
Sbjct: 14 SLWIGDLQYWMDESYLSNAFAPMGQQVTSVKVIRNKQSGHSEGYGFIEFQSHAAAEYALA 73
Query: 228 EMNG--VLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
NG +L + ++ A++G ++A +D TIFVG L
Sbjct: 74 NFNGRMMLNVDQLFKL-----NWASSGAGERRAA----------DDGPEHTIFVGDLASD 118
Query: 286 VTDDILKTVFG------QYGELVHVKIPA-GKRCGFVQFAN 319
VTD +L+ F + ++V K+ K GFV+F +
Sbjct: 119 VTDSMLEEAFKTSYPSVRGAKVVFDKVTGRSKGYGFVRFGD 159
>gi|125558527|gb|EAZ04063.1| hypothetical protein OsI_26200 [Oryza sativa Indica Group]
Length = 323
Score = 246 bits (629), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 125/191 (65%), Positives = 145/191 (75%), Gaps = 2/191 (1%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVS 124
P D IRSLWIGDLQ WM+ESY+++ F G+ V S KVIRNKQ+ SEGYGFIEF S
Sbjct: 120 PAPGGDEIRSLWIGDLQYWMDESYLSNAFAPMGQQVTSVKVIRNKQSGHSEGYGFIEFQS 179
Query: 125 HAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQ-DDGPDFTIFVGDLAADVTDYVL 183
HAAAE L FNG M + +Q F+LNWA+ GAGERR DDGP+ TIFVGDLA+DVTD +L
Sbjct: 180 HAAAEYALANFNGRMMLNVDQLFKLNWASSGAGERRAADDGPEHTIFVGDLASDVTDSML 239
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+E F+ Y SV+GAKVV D+ TGRSKGYGFVRFGDE+EQ R+MTEMNG STR MR+GP
Sbjct: 240 EEAFKTSYPSVRGAKVVFDKVTGRSKGYGFVRFGDENEQTRAMTEMNGATLSTRQMRLGP 299
Query: 244 AATKKAATGQQ 254
AA KK QQ
Sbjct: 300 AANKKNMGTQQ 310
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 20/159 (12%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + L F + V KV+ ++ +G S+GYGF+ F + ++
Sbjct: 129 SLWIGDLQYWMDESYLSNAFAPMGQQVTSVKVIRNKQSGHSEGYGFIEFQSHAAAEYALA 188
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
NG + A++G ++A +D TIFVG L VT
Sbjct: 189 NFNGRMMLNVDQLF---KLNWASSGAGERRAA----------DDGPEHTIFVGDLASDVT 235
Query: 288 DDILKTVFG------QYGELVHVKIPA-GKRCGFVQFAN 319
D +L+ F + ++V K+ K GFV+F +
Sbjct: 236 DSMLEEAFKTSYPSVRGAKVVFDKVTGRSKGYGFVRFGD 274
>gi|125600441|gb|EAZ40017.1| hypothetical protein OsJ_24455 [Oryza sativa Japonica Group]
Length = 323
Score = 246 bits (629), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 125/191 (65%), Positives = 145/191 (75%), Gaps = 2/191 (1%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVS 124
P D IRSLWIGDLQ WM+ESY+++ F G+ V S KVIRNKQ+ SEGYGFIEF S
Sbjct: 120 PAPGGDEIRSLWIGDLQYWMDESYLSNAFAPMGQQVTSVKVIRNKQSGHSEGYGFIEFQS 179
Query: 125 HAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQ-DDGPDFTIFVGDLAADVTDYVL 183
HAAAE L FNG M + +Q F+LNWA+ GAGERR DDGP+ TIFVGDLA+DVTD +L
Sbjct: 180 HAAAEYALANFNGRMMLNVDQLFKLNWASSGAGERRAADDGPEHTIFVGDLASDVTDSML 239
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+E F+ Y SV+GAKVV D+ TGRSKGYGFVRFGDE+EQ R+MTEMNG STR MR+GP
Sbjct: 240 EEAFKTSYPSVRGAKVVFDKVTGRSKGYGFVRFGDENEQTRAMTEMNGATLSTRQMRLGP 299
Query: 244 AATKKAATGQQ 254
AA KK QQ
Sbjct: 300 AANKKNMGTQQ 310
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 20/159 (12%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + L F + V KV+ ++ +G S+GYGF+ F + ++
Sbjct: 129 SLWIGDLQYWMDESYLSNAFAPMGQQVTSVKVIRNKQSGHSEGYGFIEFQSHAAAEYALA 188
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
NG + A++G ++A +D TIFVG L VT
Sbjct: 189 NFNGRMMLNVDQLF---KLNWASSGAGERRAA----------DDGPEHTIFVGDLASDVT 235
Query: 288 DDILKTVFG------QYGELVHVKIPA-GKRCGFVQFAN 319
D +L+ F + ++V K+ K GFV+F +
Sbjct: 236 DSMLEEAFKTSYPSVRGAKVVFDKVTGRSKGYGFVRFGD 274
>gi|357111822|ref|XP_003557709.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 361
Score = 246 bits (629), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 124/247 (50%), Positives = 163/247 (65%), Gaps = 18/247 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
RSL IG L WM E Y+ S F + E +S V RNK+T SE +G++ F HA A+++LQ
Sbjct: 51 RSLRIGGLLDWMNEEYLRSCFTRSPELLSAVVKRNKETGKSECFGYLNFADHATADQILQ 110
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
++NG +MP+ +++FRL+W T ++R DDG + I+VGDLA DVTD++L F++ Y S
Sbjct: 111 SYNGQKMPNADRDFRLSWVTNYPVQKRDDDGHN--IYVGDLAFDVTDFMLHHVFKSRYPS 168
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VK AK+ D GRSKGYGFV FGD +E+ ++MTEMNG CSTRPMR+GP ATK A
Sbjct: 169 VKHAKIAWDHFNGRSKGYGFVVFGDVNERRQAMTEMNGAYCSTRPMRVGP-ATKMA---- 223
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
G ++D NNT +FVGGLD VTD+ LK F YGEL VK+ AGK+CG
Sbjct: 224 -----------GKYSDSDSNNTRLFVGGLDRIVTDEDLKKAFSPYGELTEVKVIAGKKCG 272
Query: 314 FVQFANR 320
FV + NR
Sbjct: 273 FVTYLNR 279
>gi|110681486|emb|CAL25353.1| ACBF-like dna binding protein [Platanus x acerifolia]
Length = 216
Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 112/181 (61%), Positives = 143/181 (79%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++W+GDL WM+ +Y+ + F HTGE +S KVIRNKQT SEGYGF+EF S AAE+VLQ
Sbjct: 29 KTIWVGDLHYWMDGNYLNNCFAHTGEVISIKVIRNKQTGQSEGYGFVEFFSREAAEKVLQ 88
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
+NGT MP+TEQ FRLNWA++ GERR + G D +IFVGDL++DVTD +LQETF + Y S
Sbjct: 89 NYNGTAMPNTEQPFRLNWASFSMGERRSEAGSDHSIFVGDLSSDVTDTLLQETFASRYPS 148
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKVV D TGRSKGYGFVRFGD++E+ R+++EMNG CS RPMR+G A +K++ Q
Sbjct: 149 VKGAKVVIDANTGRSKGYGFVRFGDDNERSRAISEMNGAYCSNRPMRVGVATPRKSSGYQ 208
Query: 254 Q 254
Q
Sbjct: 209 Q 209
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 68/161 (42%), Gaps = 26/161 (16%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
TI+VGDL + L F A V KV+ ++ TG+S+GYGFV F + +
Sbjct: 30 TIWVGDLHYWMDGNYLNNCF-AHTGEVISIKVIRNKQTGQSEGYGFVEFFSREAAEKVLQ 88
Query: 228 EMNGVLC--STRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
NG + +P R+ A+ + G + ++ +IFVG L
Sbjct: 89 NYNGTAMPNTEQPFRLNWASF----------------SMGERRSEAGSDHSIFVGDLSSD 132
Query: 286 VTDDILKTVFGQY-----GELVHVKIPAG--KRCGFVQFAN 319
VTD +L+ F G V + G K GFV+F +
Sbjct: 133 VTDTLLQETFASRYPSVKGAKVVIDANTGRSKGYGFVRFGD 173
>gi|303290118|ref|XP_003064346.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453944|gb|EEH51251.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 420
Score = 243 bits (621), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 130/268 (48%), Positives = 168/268 (62%), Gaps = 16/268 (5%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A G +LWIGDL WM+E+Y+ F G S K+IRNKQT +SEGYGF+E A
Sbjct: 7 AEEAGGSTLWIGDLGYWMDEAYLHQCFASVGGVASVKIIRNKQTGYSEGYGFVEMCDRAT 66
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP-------DFTIFVGDLAADVTD 180
AE L+ NGTQMP+ +QN+RLNWA++G G R G D +IFVGDL +V D
Sbjct: 67 AEHALRALNGTQMPNAQQNYRLNWASFGVGARFAGGGDGGATNSNDHSIFVGDLPPEVND 126
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
++LQE F + Y+SV+ A+VVTD TGRSKG+GFVRF DES++ R++ EMNG+ C +R MR
Sbjct: 127 FMLQEVFSSRYASVRNARVVTDPATGRSKGFGFVRFADESQRDRALVEMNGLACGSRNMR 186
Query: 241 IGPAATKKAAT-GQQ-------YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILK 292
I A +K T G Q G ++ +N T+FVGGL S++D L+
Sbjct: 187 ISLAIPRKNMTVGYQGGGGGGGDGGGGGGGGGGGARDDGDDNCTVFVGGLG-SISDAELR 245
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQFANR 320
F YGELV++KIP GK CGFVQFA R
Sbjct: 246 IHFEPYGELVYIKIPHGKGCGFVQFAQR 273
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 84/199 (42%), Gaps = 35/199 (17%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHA 126
A++ S+++GDL P + + + +F V + +V+ + T S+G+GF+ F +
Sbjct: 107 ATNSNDHSIFVGDLPPEVNDFMLQEVFSSRYASVRNARVVTDPATGRSKGFGFVRFADES 166
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWA------TYG------------------AGERRQD 162
+R L NG + +N R++ A T G G R D
Sbjct: 167 QRDRALVEMNG--LACGSRNMRISLAIPRKNMTVGYQGGGGGGGDGGGGGGGGGGGARDD 224
Query: 163 DGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
+ T+FVG L + ++D L+ F Y + K+ KG GFV+F S
Sbjct: 225 GDDNCTVFVGGLGS-ISDAELRIHFEP-YGELVYIKIP------HGKGCGFVQFAQRSCA 276
Query: 223 LRSMTEMNGVLCSTRPMRI 241
++ +N L T +R+
Sbjct: 277 EAAIAGLNNALIGTSRVRL 295
>gi|223973753|gb|ACN31064.1| unknown [Zea mays]
Length = 359
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/303 (44%), Positives = 180/303 (59%), Gaps = 37/303 (12%)
Query: 42 PPPVGWTPQPVPPPSQQTQPYGVAPD--ASSDGI--RSLWIGDLQPWMEESYIASIFGHT 97
P + W P + QP APD ASSDG RSLWIG L WM+E Y+ F +
Sbjct: 4 PYSLSWADAPPYHYHGRPQP---APDSPASSDGAGPRSLWIGGLLLWMDEDYLYGCFTTS 60
Query: 98 GEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAG 157
E +S + RNKQT SEG+GF++F H AA +L+++NG +MP+ Q+F+LNWAT
Sbjct: 61 RELLSLVIKRNKQTGQSEGFGFLKFSDHTAAAHILKSYNGQKMPNAVQDFKLNWATQQPA 120
Query: 158 ERRQDDGPDF--------------------TIFVGDLAADVTDYVLQETFRAVYSSVKGA 197
++ D PDF +IFVGDLA +VT Y+L F+A Y SVK A
Sbjct: 121 PKKLPD-PDFKLDLATQQERHAAVDSSSDHSIFVGDLAYNVTGYMLHHVFKARYPSVKSA 179
Query: 198 KVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQK 257
K++ D+ TG SK YGFV+FGD EQ++++TEMNG CSTRPMRIGP K K
Sbjct: 180 KIIFDKFTGLSKCYGFVQFGDVDEQIQALTEMNGAYCSTRPMRIGPVPKK---------K 230
Query: 258 ATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
++++ Q ++ +D NN+ +FVG LD SVT + L F YGELV VK GK CGFV +
Sbjct: 231 NSFRSKQWTESYHDANNSRLFVGQLDQSVTSEDLMQAFSPYGELVDVKALPGKGCGFVTY 290
Query: 318 ANR 320
+NR
Sbjct: 291 SNR 293
>gi|42571787|ref|NP_973984.1| RNA-binding protein 47C [Arabidopsis thaliana]
gi|332194052|gb|AEE32173.1| RNA-binding protein 47C [Arabidopsis thaliana]
Length = 310
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/274 (47%), Positives = 171/274 (62%), Gaps = 26/274 (9%)
Query: 31 QQQQQQHQTPVPPP--------------VGWTPQPVPPPSQQTQPYGVAP--------DA 68
+++ Q +P PPP + + P P PP Q + + +A
Sbjct: 36 EEENQPKTSPTPPPHWMRYPPTVIIPHQMMYAPPPFPPYHQYPNHHHLHHQSRGNKHQNA 95
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIF--GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHA 126
+ +++W+GDL WM+E+Y+ S F G E VS KVIRNK SEGYGF+EF SH
Sbjct: 96 FNGENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHD 155
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR-QDDGPDFTIFVGDLAADVTDYVLQE 185
A++VL+ FNGT MP+T+Q FRLNWA++ GE+R +++GPD +IFVGDL+ DV+D +L E
Sbjct: 156 VADKVLREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHE 215
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF Y SVK AKVV D TGRSKGYGFVRFGDE+E+ ++MTEMNGV CS+R MRIGPA
Sbjct: 216 TFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPAT 275
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFV 279
+K G Q Q N ++ E D NTT+ V
Sbjct: 276 PRK-TNGYQQQGGYMPNGTLTRPEGDIMNTTVIV 308
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 27/168 (16%)
Query: 157 GERRQD--DGPDFTIFVGDLAADVTDYVLQETFRA-VYSSVKGAKVVTDRTTGRSKGYGF 213
G + Q+ +G + TI+VGDL + + L +F + + KV+ ++ G S+GYGF
Sbjct: 89 GNKHQNAFNGENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGF 148
Query: 214 VRFGDESEQLRSMTEMNGVLC--STRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEND 271
V F + + E NG + +P R+ A+ +TG++ + EN+
Sbjct: 149 VEFESHDVADKVLREFNGTTMPNTDQPFRLNWAS---FSTGEK------------RLENN 193
Query: 272 PNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFAN 319
+ +IFVG L P V+D++L F + K P+ K V AN
Sbjct: 194 GPDLSIFVGDLSPDVSDNLLHETFSE-------KYPSVKAAKVVLDAN 234
>gi|440795338|gb|ELR16465.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 424
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/280 (43%), Positives = 165/280 (58%), Gaps = 33/280 (11%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+LW+GD+ WM+E+YI ++FG E + K+IR+K T GYGF+EF SH A RVL
Sbjct: 19 RTLWVGDIDRWMDENYIVALFGSAAEVANVKIIRDKMTGLPAGYGFVEFKSHEGAARVLN 78
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
FN +P ++FRLNWAT+G RR + GP+F++FVGDLA +++D LQ F A Y S
Sbjct: 79 DFNNVPIPGVGRSFRLNWATFGIAARRPETGPEFSLFVGDLAPEISDDQLQAFFGARYRS 138
Query: 194 VKGAKVVTDRTTGRSK----------------------GYGFVRFGDESEQLRSMTEMNG 231
V+ AKVVTD T S+ GYGFVRFGDE+E +MTEM G
Sbjct: 139 VRSAKVVTDAATAASRGTCSSAINKHLFSHFALLCSADGYGFVRFGDETECYSAMTEMQG 198
Query: 232 VLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQG-----------ENDPNNTTIFVG 280
++ +R +R+ A KK+++ G G + DP+NTTIFVG
Sbjct: 199 MMLGSRALRLSQATPKKSSSMGGGMGMPMGMPMGGGGGGGGHSAPMPEQADPSNTTIFVG 258
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
LD +V +D L+ F +GELV+V++P GK CGFVQF +R
Sbjct: 259 NLDSTVGEDELRGHFMPFGELVYVRVPPGKNCGFVQFVHR 298
>gi|212546039|ref|XP_002153173.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces marneffei ATCC 18224]
gi|210064693|gb|EEA18788.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces marneffei ATCC 18224]
Length = 392
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 135/327 (41%), Positives = 186/327 (56%), Gaps = 31/327 (9%)
Query: 24 MAYQQQSQQQQQQHQT----PVPPPVGWT----PQPVPPPSQQTQPYGVAPDASSDGIRS 75
M++Q Q QQ P P T P P P +P AP DG +
Sbjct: 1 MSFQNYEYQNQQDGAASAGAPTPADTNMTGQADPSPAPFAGTPGEPSAAAPQQGGDGKTT 60
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
LW+G+L+PW++E++I +++ GE V+ K+IR+K + + GY F++F S AAA + L +
Sbjct: 61 LWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFSSAAAAGKAL-SL 119
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NGT MP+T + F+LNWAT G A R + GP+++IFVGDL +V +YVL F++ + S
Sbjct: 120 NGTPMPNTTRAFKLNWATGGGLADRGRDERGPEYSIFVGDLGPEVNEYVLVSLFQSRFPS 179
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
K AK++TD +G S+GYGFVRF DE++Q R+++EM GV C RPMRI A K G
Sbjct: 180 CKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTATPKNKGPGV 239
Query: 254 Q------------YQKAT--------YQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKT 293
Y A Y Q DPNNTT+FVGGL VT+D L++
Sbjct: 240 GPGGMGMPGPAGIYPPAAMGGPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRS 299
Query: 294 VFGQYGELVHVKIPAGKRCGFVQFANR 320
F +GE+ +VKIP GK CGFVQF R
Sbjct: 300 FFQGFGEITYVKIPPGKGCGFVQFVQR 326
>gi|345561228|gb|EGX44324.1| hypothetical protein AOL_s00193g52 [Arthrobotrys oligospora ATCC
24927]
Length = 461
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/331 (42%), Positives = 190/331 (57%), Gaps = 36/331 (10%)
Query: 15 QYQQQHQQWMAYQQQSQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPY---GVAPDAS-S 70
QY Q QQ + QQ Q+Q P PPSQ P+ G A A+ +
Sbjct: 4 QYSQYDQQGGSTSPGGTNQQGQNQAA---------NPGQPPSQSPAPFNGNGSANGANGN 54
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +LW+G+L+PW++E++I S++ GE V+ K+IR+K N S GY F++F S AA +
Sbjct: 55 DAKTTLWMGELEPWIDENFIRSVWYSLGEQVNVKMIRDK-FNGSAGYCFVDFTSPQAAAK 113
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
L NGTQ+P++ + F+LNWA+ G +RR D GP+++IFVGDL +V ++VL F+
Sbjct: 114 AL-ALNGTQIPNSNRPFKLNWASGGGLADRRDDRGPEYSIFVGDLGPEVNEFVLVSLFQG 172
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA 249
+ S K AK++TD +G S+GYGFVRF DE +Q R++TEM GV C RPMRI A K
Sbjct: 173 RFQSCKSAKIMTDPISGMSRGYGFVRFADEMDQQRALTEMQGVYCGNRPMRISTATPKNK 232
Query: 250 ATGQQY----------QKATYQN---TQGSQGE-------NDPNNTTIFVGGLDPSVTDD 289
Q Q Y T G G DPNNTT+FVGGL VT+D
Sbjct: 233 GGNQGMMQQGMGGMAPQMGMYTMGAPTMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTED 292
Query: 290 ILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 293 ELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 323
>gi|296412343|ref|XP_002835884.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629680|emb|CAZ80041.1| unnamed protein product [Tuber melanosporum]
Length = 412
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 120/259 (46%), Positives = 170/259 (65%), Gaps = 22/259 (8%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A SD +LW+G+L+PW++E+++ +++ GE V+ K+IR+K + + GY F++F S AA
Sbjct: 38 AGSDAKTTLWMGELEPWIDEAFVRNVWYQLGEGVNVKMIRDKFSG-NAGYCFVDFSSPAA 96
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQET 186
A + L T N T +P + + F+LNWA+ G +RR D GP+++IFVGDL +V +YVL
Sbjct: 97 AAKAL-TLNATPIPGSSRPFKLNWASGGGLADRRDDRGPEYSIFVGDLGPEVNEYVLVSL 155
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
F++ + S K AK++TD +G S+GYGFVRF DE +Q R++TEM GV C RPMRI A
Sbjct: 156 FQSRFPSCKSAKIMTDPVSGMSRGYGFVRFSDEMDQQRALTEMQGVYCGNRPMRISTATP 215
Query: 247 K-KAATG----QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
K K+ATG Q+ DPNNTT+FVGGL VT+D L++ F +GE+
Sbjct: 216 KNKSATGGPPMNQF--------------TDPNNTTVFVGGLSGYVTEDELRSFFQGFGEI 261
Query: 302 VHVKIPAGKRCGFVQFANR 320
+VKIP GK CGFVQF R
Sbjct: 262 TYVKIPPGKGCGFVQFVQR 280
>gi|378727642|gb|EHY54101.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 398
Score = 230 bits (586), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 136/330 (41%), Positives = 188/330 (56%), Gaps = 36/330 (10%)
Query: 26 YQQQSQQQQQQHQTPVPPPV-GWTP-QPVPPPSQQTQPY-------GVAPDASSDGIR-- 74
Y Q QQ+ +PPP G P QP P +QQ + AP S G +
Sbjct: 5 YGQFPNAQQEAAPGQIPPPQDGAAPGQPTDPSAQQQMAFQSPDPNVNAAPQPGSGGEQKT 64
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+LW+G+L+PW++E+++ +++ GE VS K+IR+K + + GY F++F S AA + LQ
Sbjct: 65 TLWMGELEPWIDENFVRNLWFQMGEQVSVKMIRDKFSGSNAGYCFVDFSSPQAAAKALQ- 123
Query: 135 FNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
+G MP++ + F+LNWAT G +RR D GP+++IFVGDL +V +YVL F++ + S
Sbjct: 124 LSGQPMPNSTRPFKLNWATGGGLADRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQSRFPS 183
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI------------ 241
K AK++TD +G S+GYGFVRF DE +Q R++TEM GV C RPMRI
Sbjct: 184 CKSAKIMTDPLSGMSRGYGFVRFSDEGDQQRALTEMQGVYCGNRPMRISTATPKNKGLPM 243
Query: 242 --------GPAATKKAATGQQYQKATYQNTQGSQGEN---DPNNTTIFVGGLDPSVTDDI 290
GPA Y Q Q N DPNNTT+FVGGL VT+D
Sbjct: 244 QGANMGMPGPAGPMGYPPMGGPPMPYYGQQQTPQPMNQFTDPNNTTVFVGGLSGYVTEDE 303
Query: 291 LKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 304 LRSFFQGFGEITYVKIPPGKGCGFVQFVQR 333
>gi|430812963|emb|CCJ29641.1| unnamed protein product [Pneumocystis jirovecii]
Length = 853
Score = 230 bits (586), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 117/256 (45%), Positives = 166/256 (64%), Gaps = 12/256 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+LW+G+L+PW++E++I ++ + GE V+ K+IR+K + + GY F++F S AAA + L +
Sbjct: 68 ALWMGELEPWVDEAFIRQVWFNLGEQVNVKMIRDKFSGSNAGYCFVDFSSTAAASKAL-S 126
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDD-GPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NGT +P T + F+LNWA+ G R+DD P+F+IFVGDL +V +Y+L F++ Y S
Sbjct: 127 LNGTIIPGTTRLFKLNWASGGGLTDRKDDREPEFSIFVGDLGPEVNEYLLVSLFQSRYPS 186
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
K AK++TD +G S+GYGFVRF DE +Q R++TEM GV C +RP+RI AT K G
Sbjct: 187 CKSAKIMTDLVSGMSRGYGFVRFSDEVDQRRALTEMQGVYCGSRPIRIS-TATPKNKPGM 245
Query: 254 QYQKAT---------YQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHV 304
+ Y Q DPNNTT+FVGGL VT+D L++ F +GE+ +V
Sbjct: 246 SHINMMHMGMSPLGYYGAPQPMNQFTDPNNTTVFVGGLSSFVTEDELRSFFQGFGEITYV 305
Query: 305 KIPAGKRCGFVQFANR 320
KIP GK CGFVQF R
Sbjct: 306 KIPPGKGCGFVQFVQR 321
>gi|310798962|gb|EFQ33855.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 419
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 125/292 (42%), Positives = 174/292 (59%), Gaps = 38/292 (13%)
Query: 65 APDASSDGIRSLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGFIEFV 123
AP+ +LW+G+L+PWM+E++I +F TGE V+ KVIR+K T+ + GY F+EF
Sbjct: 50 APNQQDANKNTLWMGELEPWMDENFIKGVFLTATGEPVNVKVIRDK-TSGNAGYCFVEFT 108
Query: 124 SHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYV 182
S AA + L T NG+ +P++ + F+LNWA+ G +RR D GP+++IFVGDL +V +YV
Sbjct: 109 SSEAASKAL-TLNGSPVPNSNRAFKLNWASGGGINDRRDDRGPEYSIFVGDLGPEVNEYV 167
Query: 183 LQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
L F+A + S K AK++TD +G+S+GYGFVRF DE +Q R++ EM GV C RPMRI
Sbjct: 168 LVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFTDEQDQQRALVEMQGVYCGNRPMRIS 227
Query: 243 PAATKKAATGQQYQKATYQNTQGSQGE--------------------------------- 269
A K G YQ+ + N + G
Sbjct: 228 TATPKNRNHGGPYQQQHHGNQMMAPGLPPHQQGFYGVPSPAQYGGAYGAPYNPPGQQMNQ 287
Query: 270 -NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF +R
Sbjct: 288 FTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHR 339
>gi|325183868|emb|CCA18326.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325183943|emb|CCA18401.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 429
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 157/248 (63%), Gaps = 3/248 (1%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
++LW+GD+Q +E+YI S+F E S K+IR+K T + GYGF+EF S A+ VL
Sbjct: 5 CKTLWMGDIQLNWDEAYIGSLFASAVEQPSIKLIRDKVTGYPAGYGFLEFPSQQGAQAVL 64
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
TFNG +P+T FRLNW GAG RR D D +IFVGDLA +V+D +L TF +S
Sbjct: 65 NTFNGQIVPNTIHRFRLNW---GAGGRRIDTVEDHSIFVGDLAPEVSDELLLSTFSTRFS 121
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SV+GAKVV D T KG+GFVRFGD+ E +++ MNGV CS+RPMR+ A + G
Sbjct: 122 SVRGAKVVIDPVTRMPKGFGFVRFGDKGEADQALQTMNGVYCSSRPMRVSVATDRTKTRG 181
Query: 253 QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+Y E + NTT+F+GGLDPS T+D L+ FG GE++ VK+P G+ C
Sbjct: 182 IMPPPISYTVVGTGNTEEEGANTTVFIGGLDPSTTEDDLRARFGVIGEIMSVKVPPGRGC 241
Query: 313 GFVQFANR 320
GFVQ+ +
Sbjct: 242 GFVQYVTK 249
>gi|83774240|dbj|BAE64365.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 488
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/292 (42%), Positives = 174/292 (59%), Gaps = 28/292 (9%)
Query: 49 PQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRN 108
P P P + QP + +G +LW+G+L+PW++E++I +++ GE V+ K+IR+
Sbjct: 46 PAPGEPTAAPVQP-------AQEGKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRD 98
Query: 109 KQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPD 166
K + + GY F++F S AAA + L + NGT MP+T + F+LNWAT G A R D GP+
Sbjct: 99 KFSGSNAGYCFVDFSSPAAAAKAL-SLNGTPMPNTNRLFKLNWATGGGLADRSRDDRGPE 157
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
++IFVGDL +V +YVL F++ + S K AK++TD +G S+GYGFVRF DE++Q R++
Sbjct: 158 YSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRAL 217
Query: 227 TEMNGVLCSTRPMRIGPAATKKAATGQQYQKAT------------------YQNTQGSQG 268
+EM GV C RPMRI A K G Y Q
Sbjct: 218 SEMQGVYCGNRPMRISTATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMNQ 277
Query: 269 ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 278 FTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 329
>gi|302420775|ref|XP_003008218.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
albo-atrum VaMs.102]
gi|261353869|gb|EEY16297.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
albo-atrum VaMs.102]
Length = 430
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 132/318 (41%), Positives = 182/318 (57%), Gaps = 44/318 (13%)
Query: 37 HQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFG- 95
+ TPV +G+ PP + + G +PD + +LW+G+L+PWM+E++I +F
Sbjct: 22 YGTPVAAGMGY-----PPNANELTGPGNSPDGNKT---TLWMGELEPWMDENFIKGVFAT 73
Query: 96 HTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG 155
TGE V+ KVIR+K + + GY F+EF S AA + L NGT +P++ + F+LNWA+ G
Sbjct: 74 ATGEQVNVKVIRDKSSG-NAGYCFVEFNSTDAASKAL-ALNGTPVPNSARMFKLNWASGG 131
Query: 156 A-GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFV 214
+RR D GP+F+IFVGDL +V ++VL F+A + S K AK++TD TG+S+GYGFV
Sbjct: 132 GINDRRDDRGPEFSIFVGDLGPEVNEFVLVSLFQARFPSCKSAKIMTDAVTGQSRGYGFV 191
Query: 215 RFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG---------------------- 252
RF DE +Q R++ EM GV C RPMRI A K G
Sbjct: 192 RFTDEQDQQRALVEMQGVYCGNRPMRISTATPKNRNHGPYGAQQGHQMPPAMHPHQPQAF 251
Query: 253 ----------QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
Q Y A Q DPNNTT+FVGGL VT+D L++ F +GE+
Sbjct: 252 YGVPPGPQFNQGYGAAPQFQQQQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEIT 311
Query: 303 HVKIPAGKRCGFVQFANR 320
+VKIP GK CGFVQF +R
Sbjct: 312 YVKIPPGKGCGFVQFVHR 329
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 52/132 (39%), Gaps = 24/132 (18%)
Query: 34 QQQHQTPVPPPVGWTPQP-----VPPPSQQTQPYGVAPDASSDGIR--------SLWIGD 80
QQ HQ P P QP VPP Q Q YG AP + ++++G
Sbjct: 234 QQGHQMP---PAMHPHQPQAFYGVPPGPQFNQGYGAAPQFQQQQMNQFTDPNNTTVFVGG 290
Query: 81 LQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQM 140
L ++ E + S F GE K+ K G GF++FV AAE + G
Sbjct: 291 LSGYVTEDELRSFFQGFGEITYVKIPPGK------GCGFVQFVHRHAAEMAINQMQG--Y 342
Query: 141 PSTEQNFRLNWA 152
P RL+W
Sbjct: 343 PIGNSRVRLSWG 354
>gi|346977902|gb|EGY21354.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
dahliae VdLs.17]
Length = 418
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 132/318 (41%), Positives = 182/318 (57%), Gaps = 44/318 (13%)
Query: 37 HQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFG- 95
+ TPV +G+ PP + + G +PD + +LW+G+L+PWM+E++I +F
Sbjct: 22 YGTPVAAGMGY-----PPNANELTGPGNSPDGNKT---TLWMGELEPWMDENFIKGVFAT 73
Query: 96 HTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG 155
TGE V+ KVIR+K + + GY F+EF S AA + L NGT +P++ + F+LNWA+ G
Sbjct: 74 ATGEQVNVKVIRDKSSG-NAGYCFVEFNSTDAASKAL-ALNGTPVPNSARMFKLNWASGG 131
Query: 156 A-GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFV 214
+RR D GP+F+IFVGDL +V ++VL F+A + S K AK++TD TG+S+GYGFV
Sbjct: 132 GINDRRDDRGPEFSIFVGDLGPEVNEFVLVSLFQARFPSCKSAKIMTDAVTGQSRGYGFV 191
Query: 215 RFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG---------------------- 252
RF DE +Q R++ EM GV C RPMRI A K G
Sbjct: 192 RFTDEQDQQRALVEMQGVYCGNRPMRISTATPKNRNHGPYGAQQGHQMPPAMHPHQPQAF 251
Query: 253 ----------QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
Q Y A Q DPNNTT+FVGGL VT+D L++ F +GE+
Sbjct: 252 YGVPPGPQFNQGYGAAPQFQQQQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEIT 311
Query: 303 HVKIPAGKRCGFVQFANR 320
+VKIP GK CGFVQF +R
Sbjct: 312 YVKIPPGKGCGFVQFVHR 329
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 52/132 (39%), Gaps = 24/132 (18%)
Query: 34 QQQHQTPVPPPVGWTPQP-----VPPPSQQTQPYGVAPDASSDGIR--------SLWIGD 80
QQ HQ P P QP VPP Q Q YG AP + ++++G
Sbjct: 234 QQGHQMP---PAMHPHQPQAFYGVPPGPQFNQGYGAAPQFQQQQMNQFTDPNNTTVFVGG 290
Query: 81 LQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQM 140
L ++ E + S F GE K+ K G GF++FV AAE + G
Sbjct: 291 LSGYVTEDELRSFFQGFGEITYVKIPPGK------GCGFVQFVHRHAAEMAINQMQG--Y 342
Query: 141 PSTEQNFRLNWA 152
P RL+W
Sbjct: 343 PIGNSRVRLSWG 354
>gi|414886902|tpg|DAA62916.1| TPA: hypothetical protein ZEAMMB73_604225 [Zea mays]
Length = 308
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 116/196 (59%), Positives = 137/196 (69%), Gaps = 4/196 (2%)
Query: 61 PYGVAPDASSDGIRSLWIGDLQPWMEESYIA-SIFGHTGE-FVSGKVIRNKQTNFSEGYG 118
PYG P S +R+LWIGDLQ WM+E+Y+ + F + S K+IRNKQT SEGYG
Sbjct: 103 PYGTTP--GSGEVRTLWIGDLQHWMDENYLHYNAFAAVAQQIASVKIIRNKQTGHSEGYG 160
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADV 178
FIEF S AAAE L FNG MP+ E F+LNWA+ G++R D G D TIFVGDLA DV
Sbjct: 161 FIEFYSRAAAEHTLMNFNGQMMPNVEMTFKLNWASASTGDKRGDSGSDRTIFVGDLAHDV 220
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
TD +L++ FRA Y SV+GA VV DR TG KG+GFVRFGD +EQ R+MTEMNG+L STR
Sbjct: 221 TDSMLEDVFRAKYPSVRGANVVVDRMTGWPKGFGFVRFGDLNEQARAMTEMNGMLLSTRQ 280
Query: 239 MRIGPAATKKAATGQQ 254
MRIG AA KK QQ
Sbjct: 281 MRIGAAANKKNRDAQQ 296
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 29/175 (16%)
Query: 153 TYGAGERRQDDGPDFTIFVGDLAADVT-DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGY 211
T G+GE R T+++GDL + +Y+ F AV + K++ ++ TG S+GY
Sbjct: 107 TPGSGEVR-------TLWIGDLQHWMDENYLHYNAFAAVAQQIASVKIIRNKQTGHSEGY 159
Query: 212 GFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEND 271
GF+ F + ++ NG + M + A+ + +G G
Sbjct: 160 GFIEFYSRAAAEHTLMNFNGQMMPNVEMTFK----------LNWASASTGDKRGDSG--- 206
Query: 272 PNNTTIFVGGLDPSVTDDILKTVF-GQY----GELVHVKIPAG--KRCGFVQFAN 319
++ TIFVG L VTD +L+ VF +Y G V V G K GFV+F +
Sbjct: 207 -SDRTIFVGDLAHDVTDSMLEDVFRAKYPSVRGANVVVDRMTGWPKGFGFVRFGD 260
>gi|348670884|gb|EGZ10705.1| hypothetical protein PHYSODRAFT_520170 [Phytophthora sojae]
Length = 390
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 118/250 (47%), Positives = 167/250 (66%), Gaps = 16/250 (6%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
++LW+GD+Q +E++I+S+F GE K+IR+K T + GYGF+EF + A++VL
Sbjct: 5 CKTLWMGDIQMHWDETFISSLFASAGEQPVVKLIRDKVTGYPAGYGFLEFPTQRGAQQVL 64
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
T+NG +P+T FR+NW GAG RR + D +IFVGDLA DVTD +L TF + ++
Sbjct: 65 DTYNGQVIPNTMHRFRMNW---GAGGRRIETSDDHSIFVGDLAPDVTDELLLSTFNSRFT 121
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SV+GAKVV D T SKG+GFVRFG + E +++ MNGV CS+RPMR+ AT+++ +
Sbjct: 122 SVRGAKVVMDPVTRMSKGFGFVRFGSKEEADQALQTMNGVYCSSRPMRV-SVATERSKSR 180
Query: 253 QQYQKATYQNTQGSQG--ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
Q QG+ G E + NTT+FVGGLDPS T+D L+ FG GE+V VK+P G+
Sbjct: 181 Q----------QGAFGAPEEEGTNTTVFVGGLDPSTTEDELRARFGALGEIVSVKVPPGR 230
Query: 311 RCGFVQFANR 320
CGFVQ+ ++
Sbjct: 231 GCGFVQYTSK 240
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 85/169 (50%), Gaps = 17/169 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL P + + + S F V G KV+ + T S+G+GF+ F S A++ LQ
Sbjct: 97 SIFVGDLAPDVTDELLLSTFNSRFTSVRGAKVVMDPVTRMSKGFGFVRFGSKEEADQALQ 156
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQ-------DDGPDFTIFVGDLAADVTDYVLQET 186
T NG S + R++ AT + R+Q ++G + T+FVG L T+ L+
Sbjct: 157 TMNGVYCSS--RPMRVSVATERSKSRQQGAFGAPEEEGTNTTVFVGGLDPSTTEDELRAR 214
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCS 235
F A+ G V GR G GFV++ + ++T+MNG + S
Sbjct: 215 FGAL-----GEIVSVKVPPGR--GCGFVQYTSKEAAEVAITQMNGTVIS 256
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P E + + FG GE VS KV + G GF+++ S AAE +
Sbjct: 196 TVFVGGLDPSTTEDELRARFGALGEIVSVKVPPGR------GCGFVQYTSKEAAEVAITQ 249
Query: 135 FNGTQMPSTEQ 145
NGT + +Q
Sbjct: 250 MNGTVISGVKQ 260
>gi|70982362|ref|XP_746709.1| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
fumigatus Af293]
gi|66844333|gb|EAL84671.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus fumigatus Af293]
gi|159123048|gb|EDP48168.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus fumigatus A1163]
Length = 418
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 120/271 (44%), Positives = 167/271 (61%), Gaps = 21/271 (7%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
++G +LW+G+L+PW++E++I +++ GE V+ K+IR+K + + GY F++F S AAA
Sbjct: 63 NEGKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFSSPAAAA 122
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
+ L + NGT MP+T + F+LNWAT G A R D GP+++IFVGDL +V +YVL F
Sbjct: 123 KAL-SLNGTPMPNTNRVFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSLF 181
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
+ + S K AK++TD +G S+GYGFVRF DE++Q R++TEM GV C RPMRI A K
Sbjct: 182 QNRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALTEMQGVYCGNRPMRISTATPK 241
Query: 248 KAATG------------------QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDD 289
G Y Q DPNNTT+FVGGL VT+D
Sbjct: 242 NKGPGVVPGAMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTED 301
Query: 290 ILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 302 ELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 332
>gi|391868084|gb|EIT77307.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 395
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 123/292 (42%), Positives = 174/292 (59%), Gaps = 28/292 (9%)
Query: 49 PQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRN 108
P P P + QP + +G +LW+G+L+PW++E+++ +++ GE V+ K+IR+
Sbjct: 46 PAPGEPTAAPVQP-------AQEGKTTLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRD 98
Query: 109 KQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPD 166
K + + GY F++F S AAA + L + NGT MP+T + F+LNWAT G A R D GP+
Sbjct: 99 KFSGSNAGYCFVDFSSPAAAAKAL-SLNGTPMPNTNRLFKLNWATGGGLADRSRDDRGPE 157
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
++IFVGDL +V +YVL F++ + S K AK++TD +G S+GYGFVRF DE++Q R++
Sbjct: 158 YSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRAL 217
Query: 227 TEMNGVLCSTRPMRIGPAATKKAATGQQYQKAT------------------YQNTQGSQG 268
+EM GV C RPMRI A K G Y Q
Sbjct: 218 SEMQGVYCGNRPMRISTATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMNQ 277
Query: 269 ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 278 FTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 329
>gi|406866319|gb|EKD19359.1| RNA-binding protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 812
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 126/303 (41%), Positives = 175/303 (57%), Gaps = 35/303 (11%)
Query: 51 PVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQ 110
P P Q P G + S D +LW+G+L+PW++E+++ S++ GE V+ K+IR+K
Sbjct: 284 PAPFAQQGGNPDGSSGSVSGDAKTTLWMGELEPWIDENFVRSVWFGMGEQVNVKMIRDKF 343
Query: 111 TNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTI 169
+ + GY FI+F S AAA + L + NG+ +P+T + F+LNWA+ G +RR D GP+++I
Sbjct: 344 SG-NAGYCFIDFSSPAAAAKAL-SLNGSMIPNTARPFKLNWASGGGLADRRDDRGPEYSI 401
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
FVGDL +V +YVL F+A + S K AK++TD +G S+GYGFVRF DE +Q R++TEM
Sbjct: 402 FVGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDPISGMSRGYGFVRFADEGDQQRALTEM 461
Query: 230 NGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGE-------------------- 269
GV C RPMRI A K A G Q + G
Sbjct: 462 QGVYCGNRPMRISTATPKNKAGGGGPAGMPMQQGGPNMGPGMPAAPGMYSMGAPPPMQYG 521
Query: 270 ------------NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF
Sbjct: 522 GGYGQQQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQF 581
Query: 318 ANR 320
R
Sbjct: 582 VQR 584
>gi|171695760|ref|XP_001912804.1| hypothetical protein [Podospora anserina S mat+]
gi|170948122|emb|CAP60286.1| unnamed protein product [Podospora anserina S mat+]
Length = 390
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 118/273 (43%), Positives = 172/273 (63%), Gaps = 22/273 (8%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHT-GEFVSGKVIRNKQTNFSEGYGFIEFVSHA 126
A S+ ++LW+G+++PWM+E++I ++F +T E V KVIR++ + + GY F+EF +
Sbjct: 35 APSEAAKTLWMGEMEPWMDENFIKNVFSNTSAENVQVKVIRDRNSG-NAGYCFVEFSTPE 93
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQE 185
AA++ L NGT +P++++ F+LNWA+ G +RR D GP+++IFVGDL +V ++VL
Sbjct: 94 AAQKAL-ALNGTPVPNSQRVFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEFVLVS 152
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F++ + S K AK++TD TG+S+GYGFVRF DES+Q R++ EM GV C RPMRI A
Sbjct: 153 LFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDESDQQRALVEMQGVYCGNRPMRISTAT 212
Query: 246 TKK------------------AATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
K G A + Q DPNNTT+FVGGL VT
Sbjct: 213 PKTRYMMPPVPGAQAPMWGGVPPYGYAQPAAPFNPMQPMNQFTDPNNTTVFVGGLSGYVT 272
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
+D L++ F +GE+ +VKIP GK CGFVQF +R
Sbjct: 273 EDELRSFFQGFGEITYVKIPPGKGCGFVQFVHR 305
>gi|301107790|ref|XP_002902977.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098095|gb|EEY56147.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 382
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/248 (45%), Positives = 163/248 (65%), Gaps = 12/248 (4%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
++LW+GD+Q +E++I S+F E K+IR+K T + GYGF+EF + A++VL
Sbjct: 5 CKTLWMGDIQMHWDEAFITSLFSSAAEQPVVKLIRDKVTGYPAGYGFLEFPTQQGAQQVL 64
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
+T NG +P+T FR+NW GAG RR + D +IFVGDLA DVTD +L TF A ++
Sbjct: 65 ETLNGQLIPNTMHRFRMNW---GAGGRRIETSDDHSIFVGDLAPDVTDELLLATFNARFT 121
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
+V+GAKVV D T SKG+GFVRFG + E +++ MNGV CS+RPMR+ AT++ +
Sbjct: 122 TVRGAKVVMDPVTRMSKGFGFVRFGSKEEADQALQTMNGVYCSSRPMRV-SVATERNKSR 180
Query: 253 QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
QQ + GE + NTT+FVGGLDP+ T+D L+ FG G +V VK+P G+ C
Sbjct: 181 QQ--------VGFTMGEEEGTNTTVFVGGLDPATTEDELRARFGALGAIVSVKVPPGRGC 232
Query: 313 GFVQFANR 320
GFVQ++++
Sbjct: 233 GFVQYSSK 240
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 81/166 (48%), Gaps = 19/166 (11%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL P + + + + F V G KV+ + T S+G+GF+ F S A++ LQ
Sbjct: 97 SIFVGDLAPDVTDELLLATFNARFTTVRGAKVVMDPVTRMSKGFGFVRFGSKEEADQALQ 156
Query: 134 TFNGTQMPS--------TEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
T NG S TE+N + GE ++G + T+FVG L T+ L+
Sbjct: 157 TMNGVYCSSRPMRVSVATERNKSRQQVGFTMGE---EEGTNTTVFVGGLDPATTEDELRA 213
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
F A+ GA V GR G GFV++ + ++++MNG
Sbjct: 214 RFGAL-----GAIVSVKVPPGR--GCGFVQYSSKEAAEVAISQMNG 252
>gi|317155988|ref|XP_001825498.2| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
oryzae RIB40]
Length = 404
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/293 (42%), Positives = 174/293 (59%), Gaps = 29/293 (9%)
Query: 49 PQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRN 108
P P P + QP + +G +LW+G+L+PW++E++I +++ GE V+ K+IR+
Sbjct: 46 PAPGEPTAAPVQP-------AQEGKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRD 98
Query: 109 KQTNFSE-GYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGP 165
K + S GY F++F S AAA + L + NGT MP+T + F+LNWAT G A R D GP
Sbjct: 99 KFSGRSNAGYCFVDFSSPAAAAKAL-SLNGTPMPNTNRLFKLNWATGGGLADRSRDDRGP 157
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
+++IFVGDL +V +YVL F++ + S K AK++TD +G S+GYGFVRF DE++Q R+
Sbjct: 158 EYSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRA 217
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQKAT------------------YQNTQGSQ 267
++EM GV C RPMRI A K G Y Q
Sbjct: 218 LSEMQGVYCGNRPMRISTATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMN 277
Query: 268 GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 278 QFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 330
>gi|429854847|gb|ELA29832.1| mRNA binding post-transcriptional regulator, partial
[Colletotrichum gloeosporioides Nara gc5]
Length = 366
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 128/293 (43%), Positives = 175/293 (59%), Gaps = 35/293 (11%)
Query: 61 PYGVAPDASSDGIRSLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGF 119
P G AP +LW+G+L+PWM+E++I +F TGE V+ KVIR+K T+ + GY F
Sbjct: 44 PGGQAPIQGDANKNTLWMGELEPWMDENFIKGVFLTATGEPVNVKVIRDK-TSGNAGYCF 102
Query: 120 IEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADV 178
+EF S AA + LQ NGT +P++ + F+LNWA+ G +RR D GP+++IFVGDL +V
Sbjct: 103 VEFTSSDAASKALQ-LNGTPVPNSNRAFKLNWASGGGINDRRDDRGPEYSIFVGDLGPEV 161
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
+YVL F+A + S K AK++TD +G+S+GYGFVRF DE +Q R++ EM GV C RP
Sbjct: 162 NEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFTDEQDQQRALVEMQGVYCGNRP 221
Query: 239 MRIGPAATKKAATGQQ--------------YQKATY---------------QNTQGSQGE 269
MRI A K G +Q+ Y N G Q
Sbjct: 222 MRISTATPKNRNHGPYQHHGNQMMAPGLPPHQQGFYGVPSPAQYGGAYGAPYNPPGQQMN 281
Query: 270 --NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DPNNTT+FVGGL VT+D L++ F +GE+ +V+IP GK CGFVQF +R
Sbjct: 282 QFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVQIPPGKGCGFVQFVHR 334
>gi|261199113|ref|XP_002625958.1| mRNA binding post-transcriptional regulator [Ajellomyces
dermatitidis SLH14081]
gi|239595110|gb|EEQ77691.1| mRNA binding post-transcriptional regulator [Ajellomyces
dermatitidis SLH14081]
gi|327353834|gb|EGE82691.1| hypothetical protein BDDG_05635 [Ajellomyces dermatitidis ATCC
18188]
Length = 399
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 123/295 (41%), Positives = 175/295 (59%), Gaps = 26/295 (8%)
Query: 51 PVPPPSQQTQPYGVAPDASSDGIRS---LWIGDLQPWMEESYIASIFGHTGEFVSGKVIR 107
P P P Q AP ++ G + LW+G+L+PW++E++I +++ GE V+ K+IR
Sbjct: 39 PSPAPFQGNASGEPAPSSAQQGGEAKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIR 98
Query: 108 NKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGP 165
+K + + GY F++F + AAA + L T +GT +P+T + F+LNWA+ G A R++ GP
Sbjct: 99 DKFSGSNAGYCFVDFTTPAAAAKAL-TLSGTPIPNTSRTFKLNWASGGGLADRSREERGP 157
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
+F+IFVGDL +V +YVL F++ + S K AK++TD +G S+GYGFVRF DE++Q R+
Sbjct: 158 EFSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRA 217
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQKAT--------------------YQNTQG 265
+TEM GV C RPMRI A K G Y Q
Sbjct: 218 LTEMQGVYCGNRPMRISTATPKNKGPGAGPGAMGMPGAGPAGMYPPMGGPPMGYYGAPQP 277
Query: 266 SQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 278 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 332
>gi|380478379|emb|CCF43635.1| RNA recognition domain-containing protein, partial [Colletotrichum
higginsianum]
Length = 419
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 129/297 (43%), Positives = 178/297 (59%), Gaps = 39/297 (13%)
Query: 61 PYGV-APDASSDGIRSLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYG 118
P GV AP+ +LW+G+L+PWM+E++I +F TGE V+ KVIR+K T+ + GY
Sbjct: 45 PGGVQAPNQQDANKNTLWMGELEPWMDENFIKGVFLTATGEPVNVKVIRDK-TSGNAGYC 103
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAAD 177
F+EF S AA + L NGT +P++ + F+LNWA+ G +RR D GP+++IFVGDL +
Sbjct: 104 FVEFSSSDAASKAL-GLNGTPVPNSNRAFKLNWASGGGINDRRDDRGPEYSIFVGDLGPE 162
Query: 178 VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTR 237
V +YVL F+A + S K AK++TD +G+S+GYGFVRF DE +Q R++ EM GV C R
Sbjct: 163 VNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFTDEQDQQRALVEMQGVYCGNR 222
Query: 238 PMRIGPAATK-KAATGQQYQK------------------------ATYQNTQGSQGE--- 269
PMRI A K ++ G YQ+ A Y G+
Sbjct: 223 PMRISTATPKNRSNHGGPYQQHHGNQMMAPGLPPHQQGFYGVPSPAQYGGAYGAPYNPPG 282
Query: 270 ------NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF +R
Sbjct: 283 QQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHR 339
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 57/148 (38%), Gaps = 15/148 (10%)
Query: 6 PSQPSDQTSQYQQQHQQWMAYQQQSQQQQQQHQTPVPPPVGWT-PQPVPPPSQQTQPYGV 64
P S+ YQQ H M QQ + P P G P PP QQ +
Sbjct: 231 PKNRSNHGGPYQQHHGNQMMAPGLPPHQQGFYGVPSPAQYGGAYGAPYNPPGQQMNQF-T 289
Query: 65 APDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVS 124
P+ ++ +++G L ++ E + S F GE K+ K G GF++FV
Sbjct: 290 DPNNTT-----VFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGK------GCGFVQFVH 338
Query: 125 HAAAERVLQTFNGTQMPSTEQNFRLNWA 152
AAE + G P RL+W
Sbjct: 339 RHAAEMAINQMQG--YPIGNSRVRLSWG 364
>gi|240280986|gb|EER44489.1| mRNA binding post-transcriptional regulator [Ajellomyces capsulatus
H143]
gi|325092520|gb|EGC45830.1| mRNA binding post-transcriptional regulator [Ajellomyces capsulatus
H88]
Length = 399
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 175/295 (59%), Gaps = 24/295 (8%)
Query: 48 TPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIR 107
+P P P+ G A A + +LW+G+L+PW++E++I +++ GE V+ K+IR
Sbjct: 40 SPAPFQAPASGEPASGSAQQAG-EAKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIR 98
Query: 108 NKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGP 165
+K + + GY F++F + AAA + L T +GT +P+T + F+LNWA+ G A R++ GP
Sbjct: 99 DKFSGSNAGYCFVDFTTPAAAAKAL-TLSGTPIPNTSRTFKLNWASGGGLADRSREERGP 157
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
+F+IFVGDL +V +YVL F++ + S K AK++TD +G S+GYGFVRF DE++Q R+
Sbjct: 158 EFSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRA 217
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQKAT--------------------YQNTQG 265
+TEM GV C RPMRI A K G Y Q
Sbjct: 218 LTEMQGVYCGNRPMRISTATPKNKGAGAGPGAMGMPGAGPAGMFPPMGGPPMGYYGAPQP 277
Query: 266 SQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 278 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 332
>gi|226292803|gb|EEH48223.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides brasiliensis Pb18]
Length = 400
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 119/273 (43%), Positives = 168/273 (61%), Gaps = 24/273 (8%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +LW+G+L+PW++E++I +++ GE V+ K+IR+K + + GY F++F S AAA +
Sbjct: 62 DAKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFSSPAAAAK 121
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
L T +GT +P+T + F+LNWA+ G A R++ GP+F+IFVGDL +V +YVL F+
Sbjct: 122 AL-TLSGTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFVGDLGPEVNEYVLVSLFQ 180
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ + S K AK++TD +G S+GYGFVRF DE++Q R++TEM GV C RPMRI A K
Sbjct: 181 SRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTATPKN 240
Query: 249 AATGQQYQKAT---------------------YQNTQGSQGENDPNNTTIFVGGLDPSVT 287
G A Y Q DPNNTT+FVGGL VT
Sbjct: 241 KGPGAGPGGAMGMPGAGPAGMYPPMGGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVT 300
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
+D L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 301 EDELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 333
>gi|154296254|ref|XP_001548559.1| hypothetical protein BC1G_12954 [Botryotinia fuckeliana B05.10]
Length = 409
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 124/302 (41%), Positives = 173/302 (57%), Gaps = 34/302 (11%)
Query: 51 PVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQ 110
P P Q G + + D +LW+G+L+PW++E++I S++ GE V+ K+IR+K
Sbjct: 49 PAPFAQQGAGVEGSSGSVTGDAKTTLWMGELEPWIDENFIRSVWFGMGEQVNVKMIRDKF 108
Query: 111 TNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTI 169
+ + GY FI+F S AAA + L + NG+ +P+T + F+LNWA+ G +RR D GP+F+I
Sbjct: 109 SG-NAGYCFIDFTSPAAAAKAL-SLNGSMIPNTTRPFKLNWASGGGLADRRDDRGPEFSI 166
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
FVGDL +V +YVL F+A + S K AK++TD +G S+GYGFVRF +E +Q R++TEM
Sbjct: 167 FVGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDPISGMSRGYGFVRFAEEGDQQRALTEM 226
Query: 230 NGVLCSTRPMRIGPAATKKAATG-------------------------------QQYQKA 258
GV C RPMRI A K + G
Sbjct: 227 QGVYCGNRPMRISTATPKNKSGGAGPAGMQMQGGGGGGMPGAMGGAPGMYGMGGGPPMAG 286
Query: 259 TYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFA 318
Y Q DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF
Sbjct: 287 YYGTPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFV 346
Query: 319 NR 320
R
Sbjct: 347 QR 348
>gi|295661580|ref|XP_002791345.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226280907|gb|EEH36473.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 400
Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 119/273 (43%), Positives = 168/273 (61%), Gaps = 24/273 (8%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +LW+G+L+PW++E++I +++ GE V+ K+IR+K + + GY F++F S AAA +
Sbjct: 62 DAKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFSSPAAAAK 121
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
L T +GT +P+T + F+LNWA+ G A R++ GP+F+IFVGDL +V +YVL F+
Sbjct: 122 AL-TLSGTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFVGDLGPEVNEYVLVSLFQ 180
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ + S K AK++TD +G S+GYGFVRF DE++Q R++TEM GV C RPMRI A K
Sbjct: 181 SRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTATPKN 240
Query: 249 AATGQQYQKAT---------------------YQNTQGSQGENDPNNTTIFVGGLDPSVT 287
G A Y Q DPNNTT+FVGGL VT
Sbjct: 241 KGPGAGPGGAMGMPGAGPAGMYPPMGGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVT 300
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
+D L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 301 EDELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 333
>gi|225680559|gb|EEH18843.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 400
Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 119/273 (43%), Positives = 168/273 (61%), Gaps = 24/273 (8%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +LW+G+L+PW++E++I +++ GE V+ K+IR+K + + GY F++F S AAA +
Sbjct: 62 DAKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFSSPAAAAK 121
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
L T +GT +P+T + F+LNWA+ G A R++ GP+F+IFVGDL +V +YVL F+
Sbjct: 122 AL-TLSGTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFVGDLGPEVNEYVLVSLFQ 180
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ + S K AK++TD +G S+GYGFVRF DE++Q R++TEM GV C RPMRI A K
Sbjct: 181 SRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTATPKN 240
Query: 249 AATGQQYQKAT---------------------YQNTQGSQGENDPNNTTIFVGGLDPSVT 287
G A Y Q DPNNTT+FVGGL VT
Sbjct: 241 KGPGAGPGGAMGMPGAGPAGMYPPMGGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVT 300
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
+D L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 301 EDELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 333
>gi|302893889|ref|XP_003045825.1| hypothetical protein NECHADRAFT_66100 [Nectria haematococca mpVI
77-13-4]
gi|256726752|gb|EEU40112.1| hypothetical protein NECHADRAFT_66100 [Nectria haematococca mpVI
77-13-4]
Length = 408
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 122/274 (44%), Positives = 169/274 (61%), Gaps = 30/274 (10%)
Query: 75 SLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+LW+G+L+PWM+E++I +F GE V+ KVIR+K + + GY F+EF S AA + L
Sbjct: 51 TLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDKNSG-NAGYCFVEFQSPDAATKAL- 108
Query: 134 TFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NGT +P++ + F+LNWA+ G +RR D GP+++IFVGDL +V +YVL F+A +
Sbjct: 109 GLNGTPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFP 168
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT- 251
S K AK++TD +G+S+GYGFVRF DE++Q R++ EM GV C RPMRI A K
Sbjct: 169 SCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKNRGNH 228
Query: 252 ----GQQ-----------YQKATYQNTQGSQGE----------NDPNNTTIFVGGLDPSV 286
GQ Q+ + QG G DPNNTT+FVGGL V
Sbjct: 229 GFGHGQHNGGPMMGGGVMPQQQMWNGAQGFYGGFNPATQMNQFTDPNNTTVFVGGLSGYV 288
Query: 287 TDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
T+D L++ F +GE+ +VKIP GK CGFVQF +R
Sbjct: 289 TEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHR 322
>gi|46806694|dbj|BAD17764.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
Length = 396
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/252 (44%), Positives = 151/252 (59%), Gaps = 45/252 (17%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
+ D R++W+GDLQ WM+E Y+ + FG +GE V
Sbjct: 107 NGDENRTIWVGDLQYWMDEGYLHNCFGPSGEHV--------------------------- 139
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
MP+T++ F+LNWA+Y GE+R + D +IFVGDLA DVTD +L + F
Sbjct: 140 -----------MPNTDRAFKLNWASYSMGEKRAELASDHSIFVGDLAVDVTDEMLMDLFA 188
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
Y SVKGAKV+ D TGRS+GYGFVRFGD++++ +MTEMNG CSTRP+RIGPA ++
Sbjct: 189 KKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKTHAMTEMNGAYCSTRPIRIGPATPRR 248
Query: 249 AATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA 308
++ Q ++D N TI+VGGLDP+ T+D L+ F +YG+L VKIP
Sbjct: 249 SSGDSGSSPP-------RQSDSDSTNRTIYVGGLDPNATEDELRKAFAKYGDLASVKIPV 301
Query: 309 GKRCGFVQFANR 320
GK+CGFVQF NR
Sbjct: 302 GKQCGFVQFVNR 313
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 76/177 (42%), Gaps = 19/177 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL + + + +F V G KVI + T S GYGF+ F +
Sbjct: 168 SIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKTHAMT 227
Query: 134 TFNGTQMPSTEQNFRLNWAT--------YGAGERRQD-DGPDFTIFVGDLAADVTDYVLQ 184
NG + + R+ AT + R+ D D + TI+VG L + T+ L+
Sbjct: 228 EMNGAY--CSTRPIRIGPATPRRSSGDSGSSPPRQSDSDSTNRTIYVGGLDPNATEDELR 285
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
+ F A Y + K+ K GFV+F + + ++ +NG + +R+
Sbjct: 286 KAF-AKYGDLASVKIPV------GKQCGFVQFVNRPDAEEALQGLNGSTIGKQAVRL 335
Score = 43.9 bits (102), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++++G L P E + F G+ S K+ KQ GF++FV+ AE LQ
Sbjct: 268 RTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQC------GFVQFVNRPDAEEALQ 321
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDD 163
NG+ + +Q RL+W A ++ + D
Sbjct: 322 GLNGSTI--GKQAVRLSWGRSPASKQSRGD 349
>gi|440636370|gb|ELR06289.1| hypothetical protein, variant [Geomyces destructans 20631-21]
gi|440636371|gb|ELR06290.1| hypothetical protein GMDG_07882 [Geomyces destructans 20631-21]
Length = 411
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/280 (42%), Positives = 169/280 (60%), Gaps = 29/280 (10%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
++D +LW+G+L+PW++E+++ S++ GE V+ K+IR+K + + GY FI+F + A
Sbjct: 69 GAADSKTTLWMGELEPWIDENFVRSVWFGMGEQVNVKMIRDKFSG-NAGYCFIDFTTPEA 127
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQET 186
A + L + NG+ +P+T + F+LNWA+ G +RR D GP+F+IFVGDL +V +YVL
Sbjct: 128 AAKAL-SLNGSMIPNTSRPFKLNWASGGGLADRRDDRGPEFSIFVGDLGPEVNEYVLVSL 186
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
F++ + S K AK++TD +G S+GYGFVRF DE +Q R++TEM GV C RPMRI A
Sbjct: 187 FQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDEGDQQRALTEMQGVYCGNRPMRISTATP 246
Query: 247 KKAATGQQYQKATYQNTQGSQGEN--------------------------DPNNTTIFVG 280
K + G A G N DPNNTT+FVG
Sbjct: 247 KNKSGGGGPPGAMGGMPGAPMGGNMAPGMYSMGAPPIGYYGAPQPMNQFTDPNNTTVFVG 306
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
GL VT+D L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 307 GLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 346
>gi|402077003|gb|EJT72352.1| tRNA selenocysteine-associated protein 1 [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 423
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/297 (42%), Positives = 181/297 (60%), Gaps = 42/297 (14%)
Query: 62 YGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGH-TGEFVSGKVIRNKQTNFSEGYGFI 120
Y AP A++D ++LW+G+L+PWM+E+++ ++ GE V+ KVIR++Q+ + GY F+
Sbjct: 32 YSGAPTANNDA-KTLWMGELEPWMDENFVKQVWQTVCGEAVNVKVIRDRQSG-NAGYCFV 89
Query: 121 EFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVT 179
EF S AA + LQ NG+ +P++++ F+LNWA+ G +RR + GP+F+IFVGDL +V
Sbjct: 90 EFNSAEAANKALQ-LNGSPVPNSQRVFKLNWASGGGLVDRRDERGPEFSIFVGDLGPEVN 148
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
++VL F+A + S K AK++TD TG+S+GYGFVRF DE +Q R++ EM GV C RPM
Sbjct: 149 EFVLVSLFQARFPSCKSAKIMTDAMTGQSRGYGFVRFTDEGDQQRALLEMQGVYCGNRPM 208
Query: 240 RIGPAATKKAATGQQYQK-------------ATYQNTQGSQ--GEN-------------- 270
RI AT K + QQY A QN G N
Sbjct: 209 RIS-TATPKTRSHQQYSAQGQHGGPMPMAAPAQQQNMNWGMPYGFNQPAPPAANNFNAAM 267
Query: 271 -------DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DPNNTT+FVGGL VT+D L++ F +G++ +VKIP GK CGFVQF +R
Sbjct: 268 QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGDITYVKIPPGKGCGFVQFVHR 324
>gi|303315831|ref|XP_003067920.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240107596|gb|EER25775.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320032017|gb|EFW13973.1| mRNA binding post-transcriptional regulator [Coccidioides posadasii
str. Silveira]
gi|392867443|gb|EAS29326.2| mRNA binding post-transcriptional regulator [Coccidioides immitis
RS]
Length = 400
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 123/275 (44%), Positives = 172/275 (62%), Gaps = 24/275 (8%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S +G +LW+G+L+PW++E++I +I+ GE V+ K+IR+K + + GY F++F + AAA
Sbjct: 61 SGEGKTTLWMGELEPWIDENFIRNIWYQMGEQVNVKMIRDKFSGSNAGYCFVDFATPAAA 120
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQET 186
+ L + NGT MP+T + F+LNWAT G + R+D P+++IFVGDL +V +YVL
Sbjct: 121 AKAL-SVNGTPMPNTNRPFKLNWATGGGLSDRSREDRTPEYSIFVGDLGPEVNEYVLVSL 179
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
F++ + S K AK++TD +G S+GYGFVRF DE++Q R++TEM GV C RPMRI A
Sbjct: 180 FQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTATP 239
Query: 247 KK----AATGQ----------QYQKATYQNTQGSQGE-------NDPNNTTIFVGGLDPS 285
K A GQ Y A G G DPNNTT+FVGGL
Sbjct: 240 KNKGPSGAPGQMGMPGAPPAGMYPPAMGGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGY 299
Query: 286 VTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
VT+D L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 300 VTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 334
>gi|322705595|gb|EFY97180.1| mRNA binding post-transcriptional regulator [Metarhizium anisopliae
ARSEF 23]
Length = 390
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 121/275 (44%), Positives = 169/275 (61%), Gaps = 31/275 (11%)
Query: 75 SLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+LW+G+L+PWM+E++I +F GE V+ KVIR+K + + GY F+EF + AA + L
Sbjct: 29 TLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDKNSG-NAGYCFVEFTTPEAATKAL- 86
Query: 134 TFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NGT +P++ + F+LNWA+ G +RR D GP+++IFVGDL +V +YVL F+A +
Sbjct: 87 GLNGTPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFP 146
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK---- 248
S K AK++TD +G+S+GYGFVRF DE++Q R++ EM GV C RPMRI A K
Sbjct: 147 SCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKNRGNH 206
Query: 249 ------------AATGQQYQKATYQNTQG--SQGEN---------DPNNTTIFVGGLDPS 285
G Q+ + QG G N DPNNTT+FVGGL
Sbjct: 207 GFGGPGHHAGGAPMMGGVPQQPMWGGMQGFPYGGYNPATQMNQFTDPNNTTVFVGGLSGY 266
Query: 286 VTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
VT+D L++ F +GE+ +VKIP GK CGFVQF +R
Sbjct: 267 VTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHR 301
>gi|119177688|ref|XP_001240593.1| hypothetical protein CIMG_07756 [Coccidioides immitis RS]
Length = 401
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 123/275 (44%), Positives = 172/275 (62%), Gaps = 24/275 (8%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S +G +LW+G+L+PW++E++I +I+ GE V+ K+IR+K + + GY F++F + AAA
Sbjct: 61 SGEGKTTLWMGELEPWIDENFIRNIWYQMGEQVNVKMIRDKFSGSNAGYCFVDFATPAAA 120
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQET 186
+ L + NGT MP+T + F+LNWAT G + R+D P+++IFVGDL +V +YVL
Sbjct: 121 AKAL-SVNGTPMPNTNRPFKLNWATGGGLSDRSREDRTPEYSIFVGDLGPEVNEYVLVSL 179
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
F++ + S K AK++TD +G S+GYGFVRF DE++Q R++TEM GV C RPMRI A
Sbjct: 180 FQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTATP 239
Query: 247 KK----AATGQ----------QYQKATYQNTQGSQGE-------NDPNNTTIFVGGLDPS 285
K A GQ Y A G G DPNNTT+FVGGL
Sbjct: 240 KNKGPSGAPGQMGMPGAPPAGMYPPAMGGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGY 299
Query: 286 VTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
VT+D L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 300 VTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 334
>gi|322694638|gb|EFY86462.1| mRNA binding post-transcriptional regulator [Metarhizium acridum
CQMa 102]
Length = 384
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 121/275 (44%), Positives = 169/275 (61%), Gaps = 31/275 (11%)
Query: 75 SLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+LW+G+L+PWM+E++I +F GE V+ KVIR+K + + GY F+EF + AA + L
Sbjct: 29 TLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDKNSG-NAGYCFVEFTTPEAATKAL- 86
Query: 134 TFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NGT +P++ + F+LNWA+ G +RR D GP+++IFVGDL +V +YVL F+A +
Sbjct: 87 GLNGTPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFP 146
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK---- 248
S K AK++TD +G+S+GYGFVRF DE++Q R++ EM GV C RPMRI A K
Sbjct: 147 SCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKNRGNH 206
Query: 249 ------------AATGQQYQKATYQNTQG--SQGEN---------DPNNTTIFVGGLDPS 285
G Q+ + QG G N DPNNTT+FVGGL
Sbjct: 207 GFGGPGHHAGGAPMMGGVPQQPMWGGMQGFPYGGYNPATQMNQFTDPNNTTVFVGGLSGY 266
Query: 286 VTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
VT+D L++ F +GE+ +VKIP GK CGFVQF +R
Sbjct: 267 VTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHR 301
>gi|326532404|dbj|BAK05131.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 356
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 166/288 (57%), Gaps = 28/288 (9%)
Query: 43 PPVGWTPQP---VPPPSQQTQPYGVAPDASSDGI-------RSLWIGDLQPWMEESYIAS 92
PP W P P QQ Q A D S G RSL I +L PWM+E Y+ S
Sbjct: 5 PPRNWAMAPPYHYHGPPQQEQAAPAAEDESGAGSGEQEAESRSLRIRELFPWMDEDYLRS 64
Query: 93 IFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWA 152
F + E V+ + RN++T SEG+G++ F HA A+++L ++NG +MP+ +++F L+W
Sbjct: 65 CFTRSPELVTAVITRNRETKQSEGFGYLTFSDHATADQILHSYNGQKMPNADRDFSLSWV 124
Query: 153 TYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYG 212
Y A + I+VG L+ DVTD++L F+ Y SVK AKV+ + RSKGYG
Sbjct: 125 QYAAADHEH------AIYVGGLSFDVTDFMLHHVFKNRYPSVKKAKVIWNVFARRSKGYG 178
Query: 213 FVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDP 272
FV FGD +E ++MTEMNG CS+RPMRIGPA K TQG+ +++
Sbjct: 179 FVVFGDVNECTQAMTEMNGAYCSSRPMRIGPATFKSDF-----------RTQGTYPDSNR 227
Query: 273 NNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
NN+ +FVG LD VTD+ L F YGEL VKI GK CGFV +++R
Sbjct: 228 NNSRLFVGQLDSCVTDEDLIKAFSPYGELT-VKIIEGKSCGFVTYSSR 274
>gi|389643224|ref|XP_003719244.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae 70-15]
gi|351639013|gb|EHA46877.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae 70-15]
gi|440462667|gb|ELQ32668.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae Y34]
gi|440489843|gb|ELQ69456.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae P131]
Length = 415
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 174/290 (60%), Gaps = 42/290 (14%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGH-TGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
+D ++LW+G+L+PWM+E++I I+ GE V+ KVIR++Q+ + GY F+EF S AA
Sbjct: 43 NDSAKTLWMGELEPWMDENFIKQIWSTVCGETVNVKVIRDRQSG-NAGYCFVEFPSSEAA 101
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
+ L NG+ +P++++ F+LNWA+ G +RR + GP+++IFVGDL +V ++VL F
Sbjct: 102 TKAL-GLNGSPVPNSQRVFKLNWASGGGLVDRRDERGPEYSIFVGDLGPEVNEFVLVSLF 160
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
+A + S K AK++TD TG+S+GYGFVRF DES+Q R++ EM GV C RPMRI AT
Sbjct: 161 QARFPSCKSAKIMTDAMTGQSRGYGFVRFTDESDQQRALVEMQGVYCGNRPMRIS-TATP 219
Query: 248 KAATGQQY------------QKATYQNTQGSQGE-------------------------N 270
K + QQY QN Q
Sbjct: 220 KTRSHQQYGNQGPHGAGPMNMTPPAQNMQWGMNPYGYQQPQAPPPNTAFNNPMQPMNQFT 279
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DPNNTT+FVGGL VT+D L++ F +G++ +VKIP GK CGFVQF +R
Sbjct: 280 DPNNTTVFVGGLSGYVTEDELRSFFQGFGDITYVKIPPGKGCGFVQFVHR 329
>gi|46122719|ref|XP_385913.1| hypothetical protein FG05737.1 [Gibberella zeae PH-1]
Length = 409
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/276 (43%), Positives = 168/276 (60%), Gaps = 32/276 (11%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTG-EFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+LW+G+L+PWM+E++I +F + E V+ KVIR+K + + GY F+EF S AA + L
Sbjct: 50 TLWMGELEPWMDENFIKGVFLSSAHENVNVKVIRDKNSG-NAGYCFVEFQSPEAATKAL- 107
Query: 134 TFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG+Q+P++ ++F+LNWA+ G +RR D GP+++IFVGDL +V +YVL F+A +
Sbjct: 108 NMNGSQVPNSSRSFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFP 167
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
S K AK++TD +G+S+GYGFVRF DE++Q R++ EM GV C RPMRI A K
Sbjct: 168 SCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKNRGNH 227
Query: 253 QQYQKATYQ--------------NTQGSQG--------------ENDPNNTTIFVGGLDP 284
+ N G QG DPNNTT+FVGGL
Sbjct: 228 GFGGQGHQHGGPMMPGMPQQQMWNGGGMQGFPYGGFNPATQMNQFTDPNNTTVFVGGLSG 287
Query: 285 SVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
VT+D L++ F +GE+ +VKIP GK CGFVQF +R
Sbjct: 288 YVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHR 323
>gi|408392147|gb|EKJ71507.1| hypothetical protein FPSE_08320 [Fusarium pseudograminearum CS3096]
Length = 442
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/277 (43%), Positives = 169/277 (61%), Gaps = 33/277 (11%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTG-EFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+LW+G+L+PWM+E++I +F + E V+ KVIR+K + + GY F+EF S AA + L
Sbjct: 50 TLWMGELEPWMDENFIKGVFLSSAHENVNVKVIRDKNSG-NAGYCFVEFQSPEAATKAL- 107
Query: 134 TFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG+Q+P++ ++F+LNWA+ G +RR D GP+++IFVGDL +V +YVL F+A +
Sbjct: 108 NMNGSQVPNSSRSFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFP 167
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
S K AK++TD +G+S+GYGFVRF DE++Q R++ EM GV C RPMRI A K
Sbjct: 168 SCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKNRGNH 227
Query: 253 QQY---------------QKATYQNTQGSQG--------------ENDPNNTTIFVGGLD 283
Q+ N G QG DPNNTT+FVGGL
Sbjct: 228 GFGGQGHQHGGPMMPGMPQQQQMWNGGGMQGFPYGGFNPATQMNQFTDPNNTTVFVGGLS 287
Query: 284 PSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
VT+D L++ F +GE+ +VKIP GK CGFVQF +R
Sbjct: 288 GYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHR 324
>gi|330935675|ref|XP_003305076.1| hypothetical protein PTT_17823 [Pyrenophora teres f. teres 0-1]
gi|311318022|gb|EFQ86789.1| hypothetical protein PTT_17823 [Pyrenophora teres f. teres 0-1]
Length = 471
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/270 (41%), Positives = 164/270 (60%), Gaps = 25/270 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+LW+G+L+PW++E+++ SI+ + GE V+ K+IR+K + + GY F++F S AA + L
Sbjct: 66 TLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGSNAGYCFVDFASPDAAAKAL-G 124
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
NG+ +P++ + F+LNWA+ G R+ GP+F++FVGDL +VT++VL + F+ Y+S
Sbjct: 125 LNGSLIPNSNRPFKLNWASGGGLADRRQRGPEFSVFVGDLGPEVTEFVLVQLFQNKYAST 184
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
K AK+++D +G S+GYGFVRF E +Q +++TEM GV C RPMRI A K + G
Sbjct: 185 KSAKIMSDPISGMSRGYGFVRFASEDDQQKALTEMQGVYCGNRPMRISTATPKNKSGGPG 244
Query: 255 YQKAT------------------------YQNTQGSQGENDPNNTTIFVGGLDPSVTDDI 290
Y Q DPNNTT+FVGGL VT+D
Sbjct: 245 GPGGMGMPQGGGGPGMGMYSMNAPPMGGYYGTPQPMNQFTDPNNTTVFVGGLSGYVTEDE 304
Query: 291 LKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 305 LRSFFQGFGEITYVKIPPGKGCGFVQFVQR 334
>gi|258576821|ref|XP_002542592.1| hypothetical protein UREG_02108 [Uncinocarpus reesii 1704]
gi|237902858|gb|EEP77259.1| hypothetical protein UREG_02108 [Uncinocarpus reesii 1704]
Length = 399
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/291 (42%), Positives = 175/291 (60%), Gaps = 26/291 (8%)
Query: 53 PPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTN 112
P P + + G P +G +LW+G+L+PW++E++I +I+ GE V+ K+IR+K +
Sbjct: 43 PAPGEGSAAAGGQP--GGEGKTTLWMGELEPWIDENFIRNIWYQMGEQVNVKMIRDKFSG 100
Query: 113 FSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIF 170
+ GY F++F + AAA + L + NGT MP+T + F+LNWAT G + R+D P+++IF
Sbjct: 101 SNAGYCFVDFATPAAAAKAL-SVNGTPMPNTNRPFKLNWATGGGLSDRNREDRTPEYSIF 159
Query: 171 VGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMN 230
VGDL +V +YVL F++ + S K AK++TD +G S+GYGFVRF DE++Q R++TEM
Sbjct: 160 VGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQ 219
Query: 231 GVLCSTRPMRIGPAATKK--------------AATGQQYQKATYQNTQGSQGE------- 269
GV C RPMRI A K A Y A G G
Sbjct: 220 GVYCGNRPMRISTATPKNKGPAGGPGQMGMPGAPPAGMYPPAMGGPPMGYYGTPQPMNQF 279
Query: 270 NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 280 TDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 330
>gi|238498926|ref|XP_002380698.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus flavus NRRL3357]
gi|220693972|gb|EED50317.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus flavus NRRL3357]
Length = 427
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/263 (43%), Positives = 162/263 (61%), Gaps = 21/263 (7%)
Query: 78 IGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNG 137
+G+L+PW++E+++ +++ GE V+ K+IR+K + + GY F++F S AAA + L + NG
Sbjct: 92 MGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFSSPAAAAKAL-SLNG 150
Query: 138 TQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVK 195
T MP+T + F+LNWAT G A R D GP+++IFVGDL +V +YVL F++ + S K
Sbjct: 151 TPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSLFQSRFPSCK 210
Query: 196 GAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQY 255
AK++TD +G S+GYGFVRF DE++Q R+++EM GV C RPMRI A K G
Sbjct: 211 SAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTATPKNKGPGVVP 270
Query: 256 QKAT------------------YQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
Y Q DPNNTT+FVGGL VT+D L++ F
Sbjct: 271 GGMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQG 330
Query: 298 YGELVHVKIPAGKRCGFVQFANR 320
+GE+ +VKIP GK CGFVQF R
Sbjct: 331 FGEITYVKIPPGKGCGFVQFVQR 353
>gi|242824554|ref|XP_002488282.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
gi|218713203|gb|EED12628.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
Length = 392
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/295 (42%), Positives = 174/295 (58%), Gaps = 25/295 (8%)
Query: 49 PQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRN 108
P P P +P A DG +LW+G+L+PW++E++I +++ GE V+ K+IR+
Sbjct: 34 PSPAPFAGTPGEPSAAATQQGGDGKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRD 93
Query: 109 KQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPD 166
K + + GY F++F S AAA + L NGT MP+T + F+LNWAT G A R + GP+
Sbjct: 94 KFSGSNAGYCFVDFASPAAAAKALSL-NGTPMPNTTRAFKLNWATGGGLADRGRDERGPE 152
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
++IFVGDL +V +YVL F++ + S K AK++TD +G S+GYGFVRF DE++Q R++
Sbjct: 153 YSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRAL 212
Query: 227 TEMNGVLCSTRPMRIGPAATKK---------------------AATGQQYQKATYQNTQG 265
+EM GV C RPMRI A K AA G Y Q
Sbjct: 213 SEMQGVYCGNRPMRISTATPKNKGPGVGPGGMGMPGPAGIYPPAAMGGP-PMGFYGAPQP 271
Query: 266 SQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 272 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 326
>gi|320587473|gb|EFW99953.1| mRNA-binding post-transcriptional regulator [Grosmannia clavigera
kw1407]
Length = 399
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 173/287 (60%), Gaps = 40/287 (13%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGH-TGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S+ ++LW+G+L+PWM+E+++ ++F +GE V+ KVIR++ + + GY F+EF + AA
Sbjct: 38 SESSKTLWMGELEPWMDENFVKNVFSTVSGEAVNVKVIRDRASG-NAGYCFVEFNTADAA 96
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
+ L T NG+ +P++ + F+LNWA+ G +RR D P+F+IFVGDL +V ++VL F
Sbjct: 97 TKAL-TLNGSPVPNSTRAFKLNWASGGGLVDRRDDRSPEFSIFVGDLGPEVNEFVLVSLF 155
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
+A + S K AK++TD TG+S+GYGFVRF DE++Q R++ EM GV C RPMRI A K
Sbjct: 156 QARFPSCKSAKIMTDAVTGQSRGYGFVRFSDETDQQRALVEMQGVYCGNRPMRISTATPK 215
Query: 248 KAATGQQYQKATYQNTQGSQGE----------------------------------NDPN 273
+ QY + + + G DPN
Sbjct: 216 TRS--HQYGQGQHGQHMPAHGPAQGNMGWGGMGNGGNGGYYQPGFGPMAPQPMNQFTDPN 273
Query: 274 NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
NTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF +R
Sbjct: 274 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHR 320
>gi|358374531|dbj|GAA91122.1| mRNA binding post-transcriptional regulator [Aspergillus kawachii
IFO 4308]
Length = 402
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/276 (43%), Positives = 172/276 (62%), Gaps = 22/276 (7%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P +++G +LW+G+L+PW++E+++ +++ GE V+ K+IR+K + + GY F++F S
Sbjct: 58 PQQANEGKTTLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFASP 117
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVL 183
AAA + L NGT MP+T + F+LNWAT G A R D GP+++IFVGDL +V +YVL
Sbjct: 118 AAAAKALSL-NGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVL 176
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI-- 241
F++ + S K AK++TD +G S+GYGFVRF DE++Q R+++EM GV C RPMRI
Sbjct: 177 VSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRIST 236
Query: 242 ------GPAATKKAATGQQYQKATYQNT----QGSQGE-------NDPNNTTIFVGGLDP 284
GP+ A G Y G G DPNNTT+FVGGL
Sbjct: 237 ATPKNKGPSLGAAGAMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSG 296
Query: 285 SVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
VT+D L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 297 YVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 332
>gi|242824548|ref|XP_002488281.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
gi|218713202|gb|EED12627.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
Length = 393
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/295 (42%), Positives = 174/295 (58%), Gaps = 25/295 (8%)
Query: 49 PQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRN 108
P P P +P A DG +LW+G+L+PW++E++I +++ GE V+ K+IR+
Sbjct: 34 PSPAPFAGTPGEPSAAATQQGGDGKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRD 93
Query: 109 KQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPD 166
K + + GY F++F S AAA + L NGT MP+T + F+LNWAT G A R + GP+
Sbjct: 94 KFSGSNAGYCFVDFASPAAAAKALSL-NGTPMPNTTRAFKLNWATGGGLADRGRDERGPE 152
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
++IFVGDL +V +YVL F++ + S K AK++TD +G S+GYGFVRF DE++Q R++
Sbjct: 153 YSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRAL 212
Query: 227 TEMNGVLCSTRPMRIGPAATKK---------------------AATGQQYQKATYQNTQG 265
+EM GV C RPMRI A K AA G Y Q
Sbjct: 213 SEMQGVYCGNRPMRISTATPKNKGPGVGPGGMGMPGPAGIYPPAAMGGP-PMGFYGAPQP 271
Query: 266 SQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 272 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 326
>gi|134079837|emb|CAK40970.1| unnamed protein product [Aspergillus niger]
Length = 402
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/276 (43%), Positives = 172/276 (62%), Gaps = 22/276 (7%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P +++G +LW+G+L+PW++E+++ +++ GE V+ K+IR+K + + GY F++F S
Sbjct: 58 PQQANEGKTTLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFASP 117
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVL 183
AAA + L NGT MP+T + F+LNWAT G A R D GP+++IFVGDL +V +YVL
Sbjct: 118 AAAAKALSL-NGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVL 176
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI-- 241
F++ + S K AK++TD +G S+GYGFVRF DE++Q R+++EM GV C RPMRI
Sbjct: 177 VSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRIST 236
Query: 242 ------GPAATKKAATGQQYQKATYQNT----QGSQGE-------NDPNNTTIFVGGLDP 284
GP+ A G Y G G DPNNTT+FVGGL
Sbjct: 237 ATPKNKGPSLGAAGAMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSG 296
Query: 285 SVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
VT+D L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 297 YVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 332
>gi|154279514|ref|XP_001540570.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412513|gb|EDN07900.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 422
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/285 (41%), Positives = 172/285 (60%), Gaps = 30/285 (10%)
Query: 64 VAPDASSDGIRSLW------IGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGY 117
+AP +S + S+W +G+L+PW++E++I +++ GE V+ K+IR+K + + GY
Sbjct: 74 IAP-VNSFCLSSMWRNACDGMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGY 132
Query: 118 GFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLA 175
F++F + AAA + L T +GT +P+T + F+LNWA+ G A R++ GP+F+IFVGDL
Sbjct: 133 CFVDFTTPAAAAKAL-TLSGTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFVGDLG 191
Query: 176 ADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCS 235
+V +YVL F++ + S K AK++TD +G S+GYGFVRF DE++Q R++TEM GV C
Sbjct: 192 PEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCG 251
Query: 236 TRPMRIGPAATKKAATGQQYQKAT--------------------YQNTQGSQGENDPNNT 275
RPMRI A K G Y Q DPNNT
Sbjct: 252 NRPMRISTATPKNKGAGAGPGAMGMPGAGPAGMFPPMGGPPMGYYGAPQPMNQFTDPNNT 311
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
T+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 312 TVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 356
>gi|400600479|gb|EJP68153.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 410
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 124/305 (40%), Positives = 172/305 (56%), Gaps = 40/305 (13%)
Query: 43 PPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIF-GHTGEFV 101
PP G P P S Q Q +LW+G+L+PWM+E++I +F +GE V
Sbjct: 28 PPSGDMSAPPPTGSSQDQ-----------AKTTLWMGELEPWMDENFIKGVFLSASGETV 76
Query: 102 SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA-GERR 160
+ KVIR+K + + GY F+EF + AA + L NG +P++ + F+LNWA+ G +RR
Sbjct: 77 NVKVIRDKNSG-NAGYCFVEFQTADAATKAL-GLNGNPVPNSSRQFKLNWASGGGLVDRR 134
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
D GP+++IFVGDL +V +YVL F+A + S K AK++TD +G+S+GYGFVRF DE+
Sbjct: 135 DDRGPEYSIFVGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDEN 194
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATG-------------------------QQY 255
+Q R++ EM GV C RPMRI A K Q +
Sbjct: 195 DQQRALVEMQGVYCGNRPMRISTATPKNRGNHGFGHGPHGGPMMGGGMPQQPMWNGMQGF 254
Query: 256 QKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFV 315
Y DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFV
Sbjct: 255 AYGGYNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFV 314
Query: 316 QFANR 320
QF +R
Sbjct: 315 QFVHR 319
>gi|121709146|ref|XP_001272322.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus clavatus NRRL 1]
gi|119400471|gb|EAW10896.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus clavatus NRRL 1]
Length = 417
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 122/271 (45%), Positives = 166/271 (61%), Gaps = 21/271 (7%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
SDG +LW+G+L+PW++E++I +++ GE V+ K+IR+K + + GY F++F S AAA
Sbjct: 62 SDGKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFASPAAAA 121
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
+ L NGT MP+T + F+LNWAT G A R D GP+++IFVGDL +V +YVL F
Sbjct: 122 KALSL-NGTPMPNTNRVFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSLF 180
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
+ + S K AK++TD +G S+GYGFVRF DE++Q R++TEM GV C RPMRI A K
Sbjct: 181 QNRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALTEMQGVYCGNRPMRISTATPK 240
Query: 248 KAATGQQYQKAT------------------YQNTQGSQGENDPNNTTIFVGGLDPSVTDD 289
G Y Q DPNNTT+FVGGL VT+D
Sbjct: 241 NKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTED 300
Query: 290 ILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 301 ELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 331
>gi|452982866|gb|EME82624.1| hypothetical protein MYCFIDRAFT_51313 [Pseudocercospora fijiensis
CIRAD86]
Length = 414
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 113/269 (42%), Positives = 162/269 (60%), Gaps = 24/269 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+LW+G+L+PW++E++I S++ G V+ K+IR+K + + GY F++F + +A R L
Sbjct: 82 TLWMGELEPWIDENFIRSVWFGMGYQVNVKMIRDKFSGSNAGYCFVDFENPDSAARAL-A 140
Query: 135 FNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG +P++ + F+LNWA+ G A R D GP+++IFVGDL +V +YVL F+ Y
Sbjct: 141 LNGQMIPNSNRQFKLNWASGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLMSLFQNKYP 200
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK-KAAT 251
S K AK+++D +G S+GYGFVRF DE++Q +++ EM GV C RPMRI A K K+
Sbjct: 201 SCKSAKIMSDPISGMSRGYGFVRFADETDQQKALHEMQGVYCGNRPMRISTATPKNKSGG 260
Query: 252 GQQYQKATYQNTQGSQGE--------------------NDPNNTTIFVGGLDPSVTDDIL 291
Q G QG DPNNTT+FVGGL VT+D L
Sbjct: 261 AGGPGMGGMQQVPGGQGMYSMGAPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDEL 320
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQFANR 320
++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 321 RSFFQGFGEITYVKIPPGKGCGFVQFVQR 349
>gi|346325712|gb|EGX95309.1| mRNA binding post-transcriptional regulator [Cordyceps militaris
CM01]
Length = 474
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 123/301 (40%), Positives = 172/301 (57%), Gaps = 38/301 (12%)
Query: 53 PPPSQQTQPYGVAPDASSDGIRS-LWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQ 110
PP + P P SSD ++ LW+G+L+PWM+E++I +F GE V+ KVIR+K
Sbjct: 88 PPSGDMSAP---PPTGSSDQSKTTLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDKN 144
Query: 111 TNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTI 169
+ + GY F+EF + AA + L NG +P++ + F+LNWA+ G +RR D GP+++I
Sbjct: 145 SG-NAGYCFVEFQNADAASKAL-GLNGNPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSI 202
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
FVGDL +V +YVL F+A + S K AK++TD +G+S+GYGFVRF DE++Q R++ EM
Sbjct: 203 FVGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEM 262
Query: 230 NGVLCSTRPMRIGPAATKKAATG------------------------------QQYQKAT 259
GV C RPMRI A K Q +
Sbjct: 263 QGVYCGNRPMRISTATPKNRGNHGFGHGHHGGGGPMMGGGMPQQQQQPMWNGMQGFAYGG 322
Query: 260 YQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFAN 319
Y DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF +
Sbjct: 323 YNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVH 382
Query: 320 R 320
R
Sbjct: 383 R 383
>gi|358380439|gb|EHK18117.1| hypothetical protein TRIVIDRAFT_117191, partial [Trichoderma virens
Gv29-8]
Length = 417
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 124/304 (40%), Positives = 171/304 (56%), Gaps = 46/304 (15%)
Query: 52 VPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQ 110
VPPP+ TQ +LW+G+L+PWM+E++I +F GE V+ KVIR+K
Sbjct: 36 VPPPAGPTQ---------DQAKTTLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDKN 86
Query: 111 TNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTI 169
+ + GY F+EF + AA + L NGT +P++ + F+LNWA+ G +RR D GP+++I
Sbjct: 87 SG-NAGYCFVEFATPDAATKAL-GLNGTPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSI 144
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
FVGDL +V +YVL F+A + S K AK++TD +G+S+GYGFVRF DE++Q R++ EM
Sbjct: 145 FVGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEM 204
Query: 230 NGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQ-----------GSQG---------- 268
GV C RPMRI A K G QG
Sbjct: 205 QGVYCGNRPMRISTATPKNRGNHGFGHGHQGGPMMGGGMPQQQMWGGVQGFPYGGGAGAG 264
Query: 269 ------------ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQ 316
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQ
Sbjct: 265 GGGFNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQ 324
Query: 317 FANR 320
F +R
Sbjct: 325 FVHR 328
>gi|340521165|gb|EGR51400.1| RNA-binding protein [Trichoderma reesei QM6a]
Length = 441
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 127/310 (40%), Positives = 175/310 (56%), Gaps = 57/310 (18%)
Query: 52 VPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQ 110
VPPP+ TQ +LW+G+L+PWM+E++I +F GE V+ KVIR+K
Sbjct: 55 VPPPTGPTQ---------DQAKTTLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDKN 105
Query: 111 TNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTI 169
+ + GY F+EF + AA + L NGT +P++ + F+LNWA+ G +RR D GP+++I
Sbjct: 106 SG-NAGYCFVEFATPDAATKAL-GLNGTPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSI 163
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
FVGDL +V +YVL F+A + S K AK++TD +G+S+GYGFVRF DE++Q R++ EM
Sbjct: 164 FVGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEM 223
Query: 230 NGVLCSTRPMRIGPAATKK---------------------------------------AA 250
GV C RPMRI A K AA
Sbjct: 224 QGVYCGNRPMRISTATPKNRGNHGFGHGHQGGPMMGGGMPQQQMWGGVQAFPYGGGGAAA 283
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
G + AT N DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK
Sbjct: 284 AGGNFNPATQMNQ-----FTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGK 338
Query: 311 RCGFVQFANR 320
CGFVQF +R
Sbjct: 339 GCGFVQFVHR 348
>gi|350295821|gb|EGZ76798.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 523
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 173/291 (59%), Gaps = 34/291 (11%)
Query: 61 PYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHT-GEFVSGKVIRNKQTNFSEGYGF 119
P + +++ ++LW+G+++ WM+E++I ++F GE V KVIR++ + + GY F
Sbjct: 62 PAALVQPGTNEASKTLWMGEMEGWMDENFIKNVFTTVLGETVQVKVIRDRNSG-NAGYCF 120
Query: 120 IEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAG-ERRQDDGPDFTIFVGDLAADV 178
IEF + AA++ L NGT +P++ + F+LNWA+ G +RR D GP+++IFVGDL +V
Sbjct: 121 IEFATPEAAQKALN-LNGTPVPNSNRAFKLNWASGGGLIDRRDDRGPEYSIFVGDLGPEV 179
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
++VL F++ + S K AK++TD TG+S+GYGFVRF DE +Q R++ EM GV C RP
Sbjct: 180 NEFVLVSLFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDEGDQQRALVEMQGVYCGNRP 239
Query: 239 MRIGPAATKKAATGQQYQKAT--------------------------YQNTQGSQGEN-- 270
MRI AT K T Q A Y Q N
Sbjct: 240 MRIS-TATPKTRTHQYGAHAPHAANPMMAPVPAHATNLQWGVPPQPYYSGFNPMQPMNQF 298
Query: 271 -DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF +R
Sbjct: 299 TDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHR 349
>gi|340924065|gb|EGS18968.1| hypothetical protein CTHT_0055850 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 393
Score = 217 bits (552), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 118/291 (40%), Positives = 174/291 (59%), Gaps = 33/291 (11%)
Query: 59 TQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHT-GEFVSGKVIRNKQTNFSEGY 117
+ P +AP+ D ++LW+G+++ WM+E++I ++F GE V KVIR++ + + GY
Sbjct: 28 SAPAPIAPNP--DAPKTLWMGEMEGWMDETFIKNVFQTVMGESVQVKVIRDRNSG-NAGY 84
Query: 118 GFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAA 176
F+EF + AA++ L NGT +P++ + F+LNWA+ G +RR D GP+++IFVGDL
Sbjct: 85 CFVEFQTPEAAQKAL-GLNGTPVPNSNRVFKLNWASGGGLVDRRDDRGPEYSIFVGDLGP 143
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+V ++VL F++ + S K AK++TD TG+S+GYGFVRF DE++ R++ EM GV C
Sbjct: 144 EVNEFVLVSLFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDEADMQRALVEMQGVYCGN 203
Query: 237 RPMRIGPAATKKAATGQQYQKAT---------------------------YQNTQGSQGE 269
RPMRI A K+ + QY Y Q
Sbjct: 204 RPMRISTATPKQRSHHHQYGHHPPAPMMPPVPGHPAAPPMWGNYPYYGQQYNPIQPMNQF 263
Query: 270 NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF +R
Sbjct: 264 TDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHR 314
>gi|328769877|gb|EGF79920.1| hypothetical protein BATDEDRAFT_19794 [Batrachochytrium
dendrobatidis JAM81]
Length = 470
Score = 216 bits (551), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 114/278 (41%), Positives = 160/278 (57%), Gaps = 28/278 (10%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
S G +LW+GDL PWM+E +I + GE V+ K+I++K T GY F+EF S A
Sbjct: 8 SSGGSTLWMGDLLPWMDEHFIRQTWRLLGESVTVKMIKDKSTGSLAGYCFVEFSSSDVAA 67
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
++L+ NGT +P T F+LNWA +G G P+F+IFVGDLA ++ D +L + F
Sbjct: 68 KLLELVNGTLIPGTHCFFKLNWA-FGGGLSPLYVLPEFSIFVGDLAHEINDILLMQVFHE 126
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA 249
Y SVK A+VV D TTG KGYGFVRFG E++Q +S+ ++ G + +RP+R+ A K
Sbjct: 127 RYPSVKSARVVIDPTTGSPKGYGFVRFGSEADQQQSLVDLQGQMIGSRPVRVSIATPKHK 186
Query: 250 ATGQQYQKA--------TYQNTQGSQ-------------------GENDPNNTTIFVGGL 282
A G +Y + G+ G NDP N+TIF+G L
Sbjct: 187 ALGSNGHGMPGYYPIPPSYMDASGAMIPNSAHMIYRQPVYMHQHLGGNDPTNSTIFIGAL 246
Query: 283 DPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
++T+D L+ F +GE+V+ KIP GKRCGFVQF +R
Sbjct: 247 PATMTNDDLRKHFLPFGEIVYTKIPFGKRCGFVQFIHR 284
>gi|85115744|ref|XP_964924.1| hypothetical protein NCU00768 [Neurospora crassa OR74A]
gi|28926722|gb|EAA35688.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|38636412|emb|CAE81949.1| related to polyadenylate-binding protein [Neurospora crassa]
Length = 491
Score = 216 bits (551), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 173/291 (59%), Gaps = 34/291 (11%)
Query: 61 PYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHT-GEFVSGKVIRNKQTNFSEGYGF 119
P + +++ ++LW+G+++ WM+E++I ++F GE V KVIR++ + + GY F
Sbjct: 30 PAALVQPGTNEASKTLWMGEMEGWMDENFIKNVFTTVLGETVQVKVIRDRNSG-NAGYCF 88
Query: 120 IEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAG-ERRQDDGPDFTIFVGDLAADV 178
IEF + AA++ L NGT +P++ + F+LNWA+ G +RR D GP+++IFVGDL +V
Sbjct: 89 IEFATPEAAQKALN-LNGTPVPNSNRAFKLNWASGGGLIDRRDDRGPEYSIFVGDLGPEV 147
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
++VL F++ + S K AK++TD TG+S+GYGFVRF DE +Q R++ EM GV C RP
Sbjct: 148 NEFVLVSLFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDEGDQQRALVEMQGVYCGNRP 207
Query: 239 MRIGPAATKKAATGQQYQKAT--------------------------YQNTQGSQGEN-- 270
MRI AT K T Q A Y Q N
Sbjct: 208 MRIS-TATPKTRTHQYGAHAPHAANPMMAPVPAHATNLQWGVPPQPYYSGFNPMQPMNQF 266
Query: 271 -DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF +R
Sbjct: 267 TDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHR 317
>gi|336463751|gb|EGO51991.1| hypothetical protein NEUTE1DRAFT_149626 [Neurospora tetrasperma
FGSC 2508]
Length = 491
Score = 216 bits (551), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 173/291 (59%), Gaps = 34/291 (11%)
Query: 61 PYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHT-GEFVSGKVIRNKQTNFSEGYGF 119
P + +++ ++LW+G+++ WM+E++I ++F GE V KVIR++ + + GY F
Sbjct: 30 PAALVQPGTNEASKTLWMGEMEGWMDENFIKNVFTTVLGETVQVKVIRDRNSG-NAGYCF 88
Query: 120 IEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAG-ERRQDDGPDFTIFVGDLAADV 178
IEF + AA++ L NGT +P++ + F+LNWA+ G +RR D GP+++IFVGDL +V
Sbjct: 89 IEFATPEAAQKALN-LNGTPVPNSNRAFKLNWASGGGLIDRRDDRGPEYSIFVGDLGPEV 147
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
++VL F++ + S K AK++TD TG+S+GYGFVRF DE +Q R++ EM GV C RP
Sbjct: 148 NEFVLVSLFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDEGDQQRALVEMQGVYCGNRP 207
Query: 239 MRIGPAATKKAATGQQYQKAT--------------------------YQNTQGSQGEN-- 270
MRI AT K T Q A Y Q N
Sbjct: 208 MRIS-TATPKTRTHQYGAHAPHAANPMMAPVPAHATNLQWGVPPQPYYSGFNPMQPMNQF 266
Query: 271 -DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF +R
Sbjct: 267 TDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHR 317
>gi|336275731|ref|XP_003352619.1| hypothetical protein SMAC_01453 [Sordaria macrospora k-hell]
gi|380094509|emb|CCC07889.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 517
Score = 216 bits (551), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 121/291 (41%), Positives = 173/291 (59%), Gaps = 34/291 (11%)
Query: 61 PYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHT-GEFVSGKVIRNKQTNFSEGYGF 119
P + +++ ++LW+G+++ WM+E++I ++F GE V KVIR++ + + GY F
Sbjct: 30 PTALVQPGTNEASKTLWMGEMEGWMDENFIKNVFTTVLGENVQVKVIRDRNSG-NAGYCF 88
Query: 120 IEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAG-ERRQDDGPDFTIFVGDLAADV 178
IEF S AA++ L NGT +P++ + F+LNWA+ G +RR D GP+++IFVGDL +V
Sbjct: 89 IEFASAEAAQKALN-LNGTPVPNSNRAFKLNWASGGGLIDRRDDRGPEYSIFVGDLGPEV 147
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
++VL F++ + S K AK++TD TG+S+GYGFVRF DE +Q R++ EM GV C RP
Sbjct: 148 NEFVLVSLFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDEGDQQRALVEMQGVYCGNRP 207
Query: 239 MRIGPAATKKAATGQQYQKAT--------------------------YQNTQGSQGEN-- 270
MRI AT K T Q A Y Q N
Sbjct: 208 MRIS-TATPKTRTHQYGAHAPHAANAMMAPVPAHAANMQWGVPPQPYYSGFNPMQPMNQF 266
Query: 271 -DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF +R
Sbjct: 267 TDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHR 317
>gi|367019444|ref|XP_003659007.1| hypothetical protein MYCTH_2087998 [Myceliophthora thermophila ATCC
42464]
gi|347006274|gb|AEO53762.1| hypothetical protein MYCTH_2087998 [Myceliophthora thermophila ATCC
42464]
Length = 396
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 119/283 (42%), Positives = 173/283 (61%), Gaps = 32/283 (11%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHT-GEFVSGKVIRNKQTNFSEGYGFIEFVSHA 126
AS++ ++LW+G+++ WM+E++I ++F E V KVIR++ + + GY FIEF +
Sbjct: 34 ASNEAPKTLWMGEMEGWMDENFIKNVFQTVLAENVQVKVIRDRHSG-NAGYCFIEFGTPE 92
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQE 185
AA++ L + NGT +P++ + F+LNWA+ G +RR D GP+++IFVGDL +V ++VL
Sbjct: 93 AAQKAL-SLNGTPVPNSTRVFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEFVLVS 151
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F++ + S K AK++TD TG+S+GYGFVRF DE++Q R++ EM GV C RPMRI A
Sbjct: 152 LFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDEADQQRALVEMQGVYCGNRPMRISTAT 211
Query: 246 TKK------AATGQQY----------------------QKATYQNTQGSQGENDPNNTTI 277
K A GQ Q A + Q DPNNTT+
Sbjct: 212 PKTRSHQYGGAHGQGANPMIPPVPGHPGPMWGAPAYYGQGAAFNPMQPMNQFTDPNNTTV 271
Query: 278 FVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF +R
Sbjct: 272 FVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHR 314
>gi|425773059|gb|EKV11433.1| MRNA binding post-transcriptional regulator (Csx1), putative
[Penicillium digitatum Pd1]
gi|425778836|gb|EKV16941.1| MRNA binding post-transcriptional regulator (Csx1), putative
[Penicillium digitatum PHI26]
Length = 408
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 126/292 (43%), Positives = 172/292 (58%), Gaps = 27/292 (9%)
Query: 53 PPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTN 112
PPP + P +DG +LW+G+L+PW++E++I +++ GE V+ K+IR+K +
Sbjct: 41 PPPGEPNS--APVPQQGADGKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSG 98
Query: 113 FSE-GYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTI 169
S GY F++F S AAA + L NGT MP+T + F+LNWAT G A R D GP+++I
Sbjct: 99 RSNAGYCFVDFASPAAAAKALSL-NGTPMPNTNRVFKLNWATGGGLADRSRDDRGPEYSI 157
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
FVGDL +V +YVL F++ + S K AK++TD +G S+GYGFVRF DE++Q R++TEM
Sbjct: 158 FVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALTEM 217
Query: 230 NGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGE-------------------- 269
GV C RPMRI A K G G G
Sbjct: 218 QGVYCGNRPMRISTATPKNKGPGVGGNGGAAMGMPGPAGMYPPMGGPPMPFYGAPQPMNQ 277
Query: 270 -NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 278 FTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 329
>gi|255954935|ref|XP_002568220.1| Pc21g11890 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589931|emb|CAP96086.1| Pc21g11890 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 408
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 126/292 (43%), Positives = 172/292 (58%), Gaps = 27/292 (9%)
Query: 53 PPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTN 112
PPP + P +DG +LW+G+L+PW++E++I +++ GE V+ K+IR+K +
Sbjct: 41 PPPGEPNA--APVPQQGADGKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSG 98
Query: 113 FSE-GYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTI 169
S GY F++F S AAA + L NGT MP+T + F+LNWAT G A R D GP+++I
Sbjct: 99 RSNAGYCFVDFASPAAAAKALSL-NGTPMPNTNRVFKLNWATGGGLADRSRDDRGPEYSI 157
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
FVGDL +V +YVL F++ + S K AK++TD +G S+GYGFVRF DE++Q R++TEM
Sbjct: 158 FVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALTEM 217
Query: 230 NGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGE-------------------- 269
GV C RPMRI A K G G G
Sbjct: 218 QGVYCGNRPMRISTATPKNKGPGVGGNGGAAMGMPGPAGMYPPMGGPPMPFYGAPQPMNQ 277
Query: 270 -NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 278 FTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 329
>gi|326524666|dbj|BAK04269.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 408
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 120/279 (43%), Positives = 168/279 (60%), Gaps = 35/279 (12%)
Query: 75 SLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+LW+G+L+PWM+E++I +F T E V+ KVIR+K + + GY F+EF + AA + L
Sbjct: 49 TLWMGELEPWMDENFIKGVFLSATTETVNVKVIRDKNSG-NAGYCFVEFQTPEAATKAL- 106
Query: 134 TFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG+ +P++ ++F+LNWA+ G +RR D GP+++IFVGDL +V +YVL F+A +
Sbjct: 107 ALNGSGVPNSSRHFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFP 166
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT- 251
S K AK++TD +G+S+GYGFVRF DE++Q R++ EM GV C RPMRI A K
Sbjct: 167 SCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKNRGNH 226
Query: 252 ---------------------GQQYQKATYQNTQGSQGEN---------DPNNTTIFVGG 281
G Q Y G G N DPNNTT+FVGG
Sbjct: 227 GFAHGHHNAMMGGMPQQQMWAGGMQQGFPYGGGGGGGGFNPATQMNQFTDPNNTTVFVGG 286
Query: 282 LDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
L VT+D L++ F +GE+ +VKIP GK CGFVQF +R
Sbjct: 287 LSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHR 325
>gi|119489215|ref|XP_001262859.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Neosartorya fischeri NRRL 181]
gi|119411017|gb|EAW20962.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Neosartorya fischeri NRRL 181]
Length = 417
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 120/271 (44%), Positives = 166/271 (61%), Gaps = 21/271 (7%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
++G +LW+G+L+PW++E++I +++ GE V+ K+IR+K + + GY F++F S AAA
Sbjct: 62 NEGKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFASPAAAA 121
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
+ L NGT MP+T + F+LNWAT G A R D GP+++IFVGDL +V +YVL F
Sbjct: 122 KALSL-NGTPMPNTNRVFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSLF 180
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
+ + S K AK++TD +G S+GYGFVRF DE++Q R++TEM GV C RPMRI A K
Sbjct: 181 QNRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALTEMQGVYCGNRPMRISTATPK 240
Query: 248 KAATG------------------QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDD 289
G Y Q DPNNTT+FVGGL VT+D
Sbjct: 241 NKGPGVVPGAMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTED 300
Query: 290 ILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 301 ELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 331
>gi|225562584|gb|EEH10863.1| RNA-binding protein [Ajellomyces capsulatus G186AR]
Length = 427
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 123/309 (39%), Positives = 177/309 (57%), Gaps = 38/309 (12%)
Query: 48 TPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIR 107
+P P P+ G A A + +LW+G+L+PW++E++I +++ GE V+ K+IR
Sbjct: 40 SPAPFQAPASGEPASGSAQQAG-EAKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIR 98
Query: 108 NK---------QTNF-----SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWAT 153
+K ++N + GY F++F + AAA + L T +GT +P+T + F+LNWA+
Sbjct: 99 DKFSGKQHESSRSNIDIPRSNAGYCFVDFTTPAAAAKAL-TLSGTPIPNTSRTFKLNWAS 157
Query: 154 YG--AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGY 211
G A R++ GP+F+IFVGDL +V +YVL F++ + S K AK++TD +G S+GY
Sbjct: 158 GGGLADRSREERGPEFSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGY 217
Query: 212 GFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKAT------------ 259
GFVRF DE++Q R++TEM GV C RPMRI A K G
Sbjct: 218 GFVRFSDETDQQRALTEMQGVYCGNRPMRISTATPKNKGAGAGPGAMGMPGAGPAGMFPP 277
Query: 260 --------YQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKR 311
Y Q DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK
Sbjct: 278 MGGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKG 337
Query: 312 CGFVQFANR 320
CGFVQF R
Sbjct: 338 CGFVQFVQR 346
>gi|298706390|emb|CBJ29399.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 434
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/255 (42%), Positives = 156/255 (61%), Gaps = 15/255 (5%)
Query: 67 DASSDGIRSLWIGDLQPWMEESYIASIFGH-TGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
D + ++LW+GD+QP E Y+ S+F G+ + K+IR++ GYGFI+F +H
Sbjct: 9 DENRSAAKTLWLGDVQPDWTEEYVESLFSSIVGQELEVKLIRDRHRGIVAGYGFIDFRNH 68
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A+ VL + NG + T +RLNW GAG +R + P++++FVGDL+ +VTD L+
Sbjct: 69 ETAQLVLDSLNGKPIEGTSLRYRLNW---GAGGKRIEQAPEYSVFVGDLSPEVTDAELKA 125
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF Y+SV GAKVVT+ TG SK +GF+RFGDE E+ ++T MNG C RP+R+ PA
Sbjct: 126 TFLGKYTSVLGAKVVTNPMTGSSKSFGFIRFGDEQERDEALTAMNGAECCGRPIRVAPAT 185
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
+ + GQ AT DP+NTT+FVGG++ SVT+ +L+ F GE+ V
Sbjct: 186 KRTSVQGQTGAHAT-----------DPSNTTVFVGGINDSVTEKVLRDTFNSAGEIQTVT 234
Query: 306 IPAGKRCGFVQFANR 320
P G+ C FV FA+R
Sbjct: 235 TPPGRGCAFVTFAHR 249
>gi|213401961|ref|XP_002171753.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
gi|211999800|gb|EEB05460.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
Length = 476
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 112/266 (42%), Positives = 163/266 (61%), Gaps = 15/266 (5%)
Query: 67 DASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHA 126
+ +S +LW+G+L P++ E+ + I+ GE V+ K+IR++ + + GY F+EF S A
Sbjct: 91 ETASHNNSTLWMGELAPFITEAMVQQIWNSLGENVNVKIIRDRYSGLNAGYCFVEFNSPA 150
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQE 185
+A + + + NGT +P T + F+LNWA+ G +RR+ P+F+IFVGDL +VT+ +L
Sbjct: 151 SAMKAM-SLNGTVIPGTNRFFKLNWASGGGLHDRREGKTPEFSIFVGDLGPEVTEPMLLS 209
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F++ Y S K AK++ D T S+GYGFVRF DE++Q R++TEM GV C RPMRI A
Sbjct: 210 LFQSRYRSCKSAKIMMDSNTNLSRGYGFVRFYDENDQKRALTEMQGVYCGNRPMRIAMAT 269
Query: 246 TKKAATGQQYQKAT-----------YQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTV 294
K + Y Y Q DP NTT+FVGGL VT++ L+ +
Sbjct: 270 PK--SKNHMYSPMNMMHIGLQPVGFYGAPQPVNQFTDPTNTTVFVGGLSGYVTEEELRFL 327
Query: 295 FGQYGELVHVKIPAGKRCGFVQFANR 320
F +GE+++VKIP GK CGFVQF NR
Sbjct: 328 FQNFGEIIYVKIPPGKGCGFVQFVNR 353
>gi|350637619|gb|EHA25976.1| hypothetical protein ASPNIDRAFT_212792 [Aspergillus niger ATCC
1015]
Length = 403
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 122/277 (44%), Positives = 172/277 (62%), Gaps = 23/277 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSE-GYGFIEFVS 124
P +++G +LW+G+L+PW++E+++ +++ GE V+ K+IR+K + S GY F++F S
Sbjct: 58 PQQANEGKTTLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGRSNAGYCFVDFAS 117
Query: 125 HAAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYV 182
AAA + L NGT MP+T + F+LNWAT G A R D GP+++IFVGDL +V +YV
Sbjct: 118 PAAAAKALSL-NGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYV 176
Query: 183 LQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI- 241
L F++ + S K AK++TD +G S+GYGFVRF DE++Q R+++EM GV C RPMRI
Sbjct: 177 LVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRIS 236
Query: 242 -------GPAATKKAATGQQYQKATYQNT----QGSQGE-------NDPNNTTIFVGGLD 283
GP+ A G Y G G DPNNTT+FVGGL
Sbjct: 237 TATPKNKGPSLGAAGAMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLS 296
Query: 284 PSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
VT+D L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 297 GYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 333
>gi|317033242|ref|XP_001395129.2| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
niger CBS 513.88]
gi|317033244|ref|XP_003188853.1| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
niger CBS 513.88]
Length = 399
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 122/277 (44%), Positives = 172/277 (62%), Gaps = 23/277 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSE-GYGFIEFVS 124
P +++G +LW+G+L+PW++E+++ +++ GE V+ K+IR+K + S GY F++F S
Sbjct: 58 PQQANEGKTTLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGRSNAGYCFVDFAS 117
Query: 125 HAAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYV 182
AAA + L NGT MP+T + F+LNWAT G A R D GP+++IFVGDL +V +YV
Sbjct: 118 PAAAAKALSL-NGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYV 176
Query: 183 LQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI- 241
L F++ + S K AK++TD +G S+GYGFVRF DE++Q R+++EM GV C RPMRI
Sbjct: 177 LVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRIS 236
Query: 242 -------GPAATKKAATGQQYQKATYQNT----QGSQGE-------NDPNNTTIFVGGLD 283
GP+ A G Y G G DPNNTT+FVGGL
Sbjct: 237 TATPKNKGPSLGAAGAMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLS 296
Query: 284 PSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
VT+D L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 297 GYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 333
>gi|367053249|ref|XP_003657003.1| hypothetical protein THITE_2132116 [Thielavia terrestris NRRL 8126]
gi|347004268|gb|AEO70667.1| hypothetical protein THITE_2132116 [Thielavia terrestris NRRL 8126]
Length = 396
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 120/284 (42%), Positives = 173/284 (60%), Gaps = 35/284 (12%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHA 126
AS++ ++LW+G+++ WM+E++I ++F V KVIR++ + + GY FIEF +
Sbjct: 35 ASNEAAKTLWMGEMEGWMDENFIKNVFQTVLSVDVQVKVIRDRNSG-NAGYCFIEFPTPD 93
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQE 185
AA++ L T NGT +P++ + F+LNWA+ G +RR D GP+++IFVGDL +V ++VL
Sbjct: 94 AAQKAL-TLNGTPVPNSSRVFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEFVLVS 152
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F++ + S K AK++TD TG+S+GYGFVRF DESEQ R++ EM GV C R MRI A
Sbjct: 153 LFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDESEQQRALVEMQGVYCGNRAMRISTAT 212
Query: 246 TKKAATGQQYQKATYQNTQ-------------------GSQGEN----------DPNNTT 276
K + Q+ + TQ G Q N DPNNTT
Sbjct: 213 PKSRS--HQFGHHGHGATQMMPPIAGHPGPMWGVPSYYGQQPFNQHIAPMNQFTDPNNTT 270
Query: 277 IFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF +R
Sbjct: 271 VFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHR 314
>gi|342875796|gb|EGU77504.1| hypothetical protein FOXB_11986 [Fusarium oxysporum Fo5176]
Length = 405
Score = 213 bits (543), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 117/277 (42%), Positives = 165/277 (59%), Gaps = 34/277 (12%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTG-EFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+LW+G+L+PWM+E++I +F E V+ KVIR+K + + GY F+EF S AA L
Sbjct: 45 TLWMGELEPWMDENFIKGVFMSAAHETVNVKVIRDKNSG-NAGYCFVEFQSPEAATNAL- 102
Query: 134 TFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG +P+++++F+LNWA+ G +RR D GP+++IFVGDL +V +YVL F+A +
Sbjct: 103 GMNGKPVPNSQRSFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFP 162
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
S K AK++TD +G+S+GYGFVRF DE++Q R++ EM GV C RPMRI AT K
Sbjct: 163 SCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRIS-TATPKNRGN 221
Query: 253 QQYQKATYQNTQGSQGE-----------------------------NDPNNTTIFVGGLD 283
+ + N G DPNNTT+FVGGL
Sbjct: 222 HGFGGQGHHNGGPMMGGMPQQQMWNGGGMQGFGYGGFNPATQMNQFTDPNNTTVFVGGLS 281
Query: 284 PSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
VT+D L++ F +GE+ +VKIP GK CGFVQF +R
Sbjct: 282 GYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHR 318
>gi|169616740|ref|XP_001801785.1| hypothetical protein SNOG_11545 [Phaeosphaeria nodorum SN15]
gi|111060133|gb|EAT81253.1| hypothetical protein SNOG_11545 [Phaeosphaeria nodorum SN15]
Length = 408
Score = 213 bits (542), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 126/333 (37%), Positives = 187/333 (56%), Gaps = 38/333 (11%)
Query: 24 MAYQQQSQQQ-----QQQHQTPVPPPVGWTPQP----VPPPSQQTQPYGVAPDA-SSDGI 73
M++ Q Q Q +Q +Q+ P +G P PP P D S G
Sbjct: 1 MSFSQYDQMQGPPAGEQPNQSGSQPDLGQQMDPSGNGFPPQGNMGPPGSAGGDGQPSAGK 60
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+LW+G+L+PW++E+++ SI+ + GE V+ K+IR+K + + GY F++F + AA + L
Sbjct: 61 TTLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSG-NAGYCFVDFSTPEAAAKAL- 118
Query: 134 TFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+ NG +P++ + F+LNWA+ G A R + GP+++IFVGDL +VT++VL + F+ Y
Sbjct: 119 SLNGQLIPNSNRPFKLNWASGGGLADRSRDERGPEYSIFVGDLGPEVTEFVLVQLFQNKY 178
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT 251
S K AK+++D +G S+GYGFVRF DE++Q +++T+M GV C RPMRI A K +
Sbjct: 179 RSTKSAKIMSDPISGMSRGYGFVRFADEADQQKALTDMQGVYCGNRPMRISTATPKNKSG 238
Query: 252 GQQYQKAT------------------------YQNTQGSQGENDPNNTTIFVGGLDPSVT 287
G Y Q DPNNTT+FVGGL VT
Sbjct: 239 GPGGPGGMGMQQGGPGGPGMGMYSMGAPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVT 298
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
+D L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 299 EDELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 331
>gi|452844119|gb|EME46053.1| hypothetical protein DOTSEDRAFT_70146 [Dothistroma septosporum
NZE10]
Length = 407
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/271 (40%), Positives = 161/271 (59%), Gaps = 26/271 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+LW+G+L+PW++E+++ S++ G V+ K+IR+K + + GY F++F + +A R LQ
Sbjct: 72 TLWMGELEPWIDENFVRSVWFGMGYQVNVKMIRDKFSGSNAGYCFVDFENPESATRALQ- 130
Query: 135 FNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG +P++ + F+LNWA+ G A R D GP+++IFVGDL +V +YVL F+ Y+
Sbjct: 131 LNGQVIPNSNRQFKLNWASGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLMSLFQGKYT 190
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
S K AK+++D +G S+GYGFVRF DE +Q +++ EM GV C RPMRI A K + G
Sbjct: 191 SCKSAKIMSDPISGMSRGYGFVRFADEGDQQKALHEMQGVYCGNRPMRISTATPKNKSGG 250
Query: 253 QQYQKAT-----------------------YQNTQGSQGENDPNNTTIFVGGLDPSVTDD 289
Y Q DPNNTT+FVGGL VT+D
Sbjct: 251 GGPGMPGMQGGMGPGAPGGVYAMGAPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTED 310
Query: 290 ILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 311 ELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 341
>gi|189197507|ref|XP_001935091.1| mRNA binding post-transcriptional regulator (Csx1) [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187981039|gb|EDU47665.1| mRNA binding post-transcriptional regulator (Csx1) [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 490
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 168/289 (58%), Gaps = 44/289 (15%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+LW+G+L+PW++E+++ SI+ + GE V+ K+IR+K + + GY F++F S AA + L +
Sbjct: 66 TLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGSNAGYCFVDFASPDAAAKAL-S 124
Query: 135 FNGTQMPSTEQNFRLNWATYGA-GERRQ------------------DDGPDFTIFVGDLA 175
NG+ +P++ + F+LNWA+ G +RRQ + GP+F++FVGDL
Sbjct: 125 LNGSLIPNSNRPFKLNWASGGGLADRRQVSQVSKYKHMANESNSRDERGPEFSVFVGDLG 184
Query: 176 ADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCS 235
+VT++VL + F+ Y+S K AK+++D +G S+GYGFVRF E +Q +++TEM GV C
Sbjct: 185 PEVTEFVLVQLFQNKYASTKSAKIMSDPISGMSRGYGFVRFASEDDQQKALTEMQGVYCG 244
Query: 236 TRPMRIGPAATKKAATGQQYQKAT------------------------YQNTQGSQGEND 271
RPMRI A K + G Y Q D
Sbjct: 245 NRPMRISTATPKNKSGGPGGPGGMGMPQGGGGPGMGMYSMNAPPMGGYYGTPQPMNQFTD 304
Query: 272 PNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
PNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 305 PNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 353
>gi|451846221|gb|EMD59531.1| hypothetical protein COCSADRAFT_251085 [Cochliobolus sativus
ND90Pr]
Length = 406
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/272 (41%), Positives = 163/272 (59%), Gaps = 28/272 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+LW+G+L+PW++E+++ SI+ + GE V+ K+IR+K + + GY F++F S AA + L
Sbjct: 65 TLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSG-NAGYCFVDFASPDAAAKAL-N 122
Query: 135 FNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG +P++ + F+LNWA+ G A R + GP+F+IFVGDL +VT++VL + F+ Y
Sbjct: 123 LNGQLIPNSNRPFKLNWASGGGLADRSRDERGPEFSIFVGDLGPEVTEFVLVQLFQNKYP 182
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA-- 250
S K AK+++D +G S+GYGFVRF E +Q +++TEM GV C RPMRI A K +
Sbjct: 183 STKSAKIMSDPISGMSRGYGFVRFASEEDQQKALTEMQGVYCGNRPMRISTATPKNKSGG 242
Query: 251 ----------------------TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTD 288
G Y Q DPNNTT+FVGGL VT+
Sbjct: 243 PGGPGGMGMPQGAGGPGMGMYSMGAPPMGNYYGAPQPMNQFTDPNNTTVFVGGLSGYVTE 302
Query: 289 DILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
D L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 303 DELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 334
>gi|396480654|ref|XP_003841045.1| hypothetical protein LEMA_P089750.1 [Leptosphaeria maculans JN3]
gi|312217619|emb|CBX97566.1| hypothetical protein LEMA_P089750.1 [Leptosphaeria maculans JN3]
Length = 433
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/271 (41%), Positives = 164/271 (60%), Gaps = 27/271 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+LW+G+L+PW++E+++ SI+ + GE V+ K+IR+K + + GY F++F S AA + L T
Sbjct: 73 TLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSG-NAGYCFVDFSSPDAAAKAL-T 130
Query: 135 FNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG +P++ + F+LNWA+ G A R + GP+++IFVGDL +VT++VL + F+ Y
Sbjct: 131 LNGQLIPNSNRPFKLNWASGGGLADRSRDERGPEYSIFVGDLGPEVTEFVLVQLFQNKYP 190
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
S K AK+++D +G S+GYGFVRF E +Q +++TEM GV C RPMRI A K + G
Sbjct: 191 STKSAKIMSDPISGMSRGYGFVRFASEEDQQKALTEMQGVYCGNRPMRISTATPKNKSGG 250
Query: 253 QQYQKAT-----------------------YQNTQGSQGENDPNNTTIFVGGLDPSVTDD 289
Y Q DPNNTT+FVGGL VT+D
Sbjct: 251 PGGPGGMGMPQQGGGPGMGMYSMGAPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTED 310
Query: 290 ILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 311 ELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 341
>gi|453086344|gb|EMF14386.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 425
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 113/278 (40%), Positives = 161/278 (57%), Gaps = 33/278 (11%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+LW+G+L+PW++E+++ S++ G V+ K+IR+K + + GY F++F + AA R LQ
Sbjct: 84 TLWMGELEPWIDENFVRSVWFGMGYQVNVKMIRDKFSGSNAGYCFVDFENPDAAGRALQ- 142
Query: 135 FNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG +P++ + F+LNWA+ G A R D GP+++IFVGDL +V +YVL F+ Y
Sbjct: 143 LNGQVIPNSNRQFKLNWASGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLMSLFQNKYP 202
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
S K AK+++D +G S+GYGFVRF DE +Q +++ EM GV C RPMRI A K + G
Sbjct: 203 SCKSAKIMSDPISGMSRGYGFVRFADEQDQQKALHEMQGVYCGNRPMRISTATPKNKSGG 262
Query: 253 Q-------------------------QYQKAT-----YQNTQGSQGENDPNNTTIFVGGL 282
Y Y Q DPNNTT+FVGGL
Sbjct: 263 AAVPPGGMPQPGMPGGPAAGGPQMPGMYSMGAPPMGYYGAPQPMNQFTDPNNTTVFVGGL 322
Query: 283 DPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
VT+D L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 323 SGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 360
>gi|451993069|gb|EMD85544.1| hypothetical protein COCHEDRAFT_1035442 [Cochliobolus
heterostrophus C5]
Length = 409
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 165/275 (60%), Gaps = 31/275 (11%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+LW+G+L+PW++E+++ SI+ + GE V+ K+IR+K + + GY F++F S AA + L
Sbjct: 65 TLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSG-NAGYCFVDFASPDAAAKAL-N 122
Query: 135 FNGTQMPSTEQNFRLNWATYGA-GERRQ----DDGPDFTIFVGDLAADVTDYVLQETFRA 189
NG +P++ + F+LNWA+ G +RRQ + GP+F+IFVGDL +VT++VL + F+
Sbjct: 123 LNGQLIPNSNRPFKLNWASGGGLADRRQVIRDERGPEFSIFVGDLGPEVTEFVLVQLFQN 182
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA 249
Y S K AK+++D +G S+GYGFVRF E +Q +++TEM GV C RPMRI A K
Sbjct: 183 KYPSTKSAKIMSDPISGMSRGYGFVRFASEEDQQKALTEMQGVYCGNRPMRISTATPKNK 242
Query: 250 A------------------------TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
+ G Y Q DPNNTT+FVGGL
Sbjct: 243 SGGPGGPGGMGMPQGAGGPGMGMYSMGAPPMGNYYGAPQPMNQFTDPNNTTVFVGGLSGY 302
Query: 286 VTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
VT+D L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 303 VTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 337
>gi|398412748|ref|XP_003857692.1| hypothetical protein MYCGRDRAFT_65137 [Zymoseptoria tritici IPO323]
gi|339477577|gb|EGP92668.1| hypothetical protein MYCGRDRAFT_65137 [Zymoseptoria tritici IPO323]
Length = 437
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 111/274 (40%), Positives = 159/274 (58%), Gaps = 29/274 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+LW+G+L+PW++E+++ S++ G V+ K+IR+K + + GY F++F + A R LQ
Sbjct: 73 TLWMGELEPWIDENFVRSVWFGMGYQVNVKMIRDKFSGSNAGYCFVDFENPDQATRALQ- 131
Query: 135 FNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG +P++ + F+LNWA+ G A R D GP+F+IFVGDL +V +YVL F+ Y+
Sbjct: 132 LNGQVIPNSNRQFKLNWASGGGLADRSRDDRGPEFSIFVGDLGPEVNEYVLMSLFQGKYT 191
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
S K AK+++D +G S+GYGFVRF DE +Q +++ EM GV C RPMRI A K +
Sbjct: 192 SCKSAKIMSDPISGMSRGYGFVRFADEQDQQKALHEMQGVYCGNRPMRISTATPKNKSGA 251
Query: 253 QQYQKAT--------------------------YQNTQGSQGENDPNNTTIFVGGLDPSV 286
Y Q DPNNTT+FVGGL V
Sbjct: 252 GGPGGMPGMGPPGGPGGNPNMGMYSMGAPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYV 311
Query: 287 TDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
T+D L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 312 TEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 345
>gi|67904206|ref|XP_682359.1| hypothetical protein AN9090.2 [Aspergillus nidulans FGSC A4]
gi|40742733|gb|EAA61923.1| hypothetical protein AN9090.2 [Aspergillus nidulans FGSC A4]
gi|67043519|gb|AAY63883.1| putative RNA binding protein [Emericella nidulans]
gi|259485498|tpe|CBF82571.1| TPA: Putative RNA binding proteinPutative uncharacterized protein ;
[Source:UniProtKB/TrEMBL;Acc:Q5ARJ0] [Aspergillus
nidulans FGSC A4]
Length = 393
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 119/272 (43%), Positives = 167/272 (61%), Gaps = 22/272 (8%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSE-GYGFIEFVSHAAA 128
++G +LW+G+L+PW++E+++ +++ GE V+ K+IR+K + S GY F++F S AAA
Sbjct: 61 NEGKTTLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGRSNAGYCFVDFASPAAA 120
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQET 186
+ L NGT MP+T + F+LNWAT G A R D GP+++IFVGDL +V +YVL
Sbjct: 121 AKALSL-NGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSL 179
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
F++ + S K AK++TD +G S+GYGFVRF DE++Q R+++EM GV C RPMRI A
Sbjct: 180 FQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTATP 239
Query: 247 KKAATGQQYQKAT------------------YQNTQGSQGENDPNNTTIFVGGLDPSVTD 288
K G Y Q DPNNTT+FVGGL VT+
Sbjct: 240 KNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTE 299
Query: 289 DILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
D L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 300 DELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 331
>gi|315043939|ref|XP_003171345.1| RNA-binding post-transcriptional regulator csx1 [Arthroderma
gypseum CBS 118893]
gi|311343688|gb|EFR02891.1| RNA-binding post-transcriptional regulator csx1 [Arthroderma
gypseum CBS 118893]
Length = 412
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 171/295 (57%), Gaps = 36/295 (12%)
Query: 61 PYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFI 120
P G + DG +LW+G+L+ W++E++I +I+ GE V+ K+IR+K + + GY F+
Sbjct: 49 PSGSPGNQQPDGKTTLWMGELEGWIDENFIRNIWYQMGEQVNVKMIRDKFSGANAGYCFV 108
Query: 121 EFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADV 178
+F + AAA + L T NGT MP+T++ F+LNWA+ G A R++ GP+F+IFVGDL +V
Sbjct: 109 DFATPAAAAKAL-TVNGTPMPNTQRPFKLNWASGGGLADRSREERGPEFSIFVGDLGPEV 167
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
+YVL F++ + S K AK++TD TG S+GYGFVRF DE++Q R+++EM GV C RP
Sbjct: 168 NEYVLVSLFQSRFPSCKSAKIMTDPITGLSRGYGFVRFSDETDQQRALSEMQGVYCGNRP 227
Query: 239 MRIGPAATKKAATGQQYQKATYQNTQGSQGE----------------------------- 269
MRI A K A G G
Sbjct: 228 MRISTATPKNKGPAGPGGPAHMGVPGGPPGGMYPPSMGGAGGPPGPGGPQMGYYGAAPQP 287
Query: 270 ----NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 288 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 342
>gi|358401132|gb|EHK50447.1| hypothetical protein TRIATDRAFT_297212 [Trichoderma atroviride IMI
206040]
Length = 409
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/285 (41%), Positives = 166/285 (58%), Gaps = 41/285 (14%)
Query: 75 SLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+LW+G+L+PWM+E++I +F GE V+ KVIR+K + + GY F+EF + +A + L
Sbjct: 30 TLWMGELEPWMDENFIKGVFLSSAGETVNVKVIRDKNSG-NAGYCFVEFPTPDSATKAL- 87
Query: 134 TFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG +P++++ F+LNWA+ G +RR D GP+++IFVGDL +V +YVL F+A +
Sbjct: 88 GLNGQAVPNSQRQFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFP 147
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
S K AK++TD +G+S+GYGFVRF DE++Q R++ EM GV C RPMRI A K
Sbjct: 148 SCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKNRGNH 207
Query: 253 --------------------------QQYQKATYQNTQGSQGEN-----------DPNNT 275
Q + G G N DPNNT
Sbjct: 208 GFGHGHQGGPMMGGGMPQQQQMWGGVQNFPYGGGGGGGGGGGGNFNPATQMNQFTDPNNT 267
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
T+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF +R
Sbjct: 268 TVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHR 312
>gi|449302980|gb|EMC98988.1| hypothetical protein BAUCODRAFT_386817 [Baudoinia compniacensis
UAMH 10762]
Length = 431
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 110/278 (39%), Positives = 161/278 (57%), Gaps = 29/278 (10%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +LW+G+L+PW++E+++ S++ G V+ K+IR+K + + GY F++F + +A R
Sbjct: 78 DSKTTLWMGELEPWIDENFVRSVWFGMGYQVNVKMIRDKFSGSNAGYCFVDFENTDSAGR 137
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
LQ NG +P++ + F+LNWA+ G A R D GP+++IFVGDL +V +YVL F+
Sbjct: 138 ALQ-LNGQMIPNSNRQFKLNWASGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLMSLFQ 196
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
Y+S K AK+++D +G S+GYGFVRF DE +Q +++ EM GV C RPMRI A K
Sbjct: 197 GKYNSCKSAKIMSDPISGMSRGYGFVRFSDEQDQQKALHEMQGVYCGNRPMRISTATPKN 256
Query: 249 AATGQQYQKATYQNTQGSQGEN--------------------------DPNNTTIFVGGL 282
+ G DPNNTT+FVGGL
Sbjct: 257 KSGGGGPGMGGMPGGMQPGMYGMGQPPMSGGGGGGGYYPQQQPMNQFTDPNNTTVFVGGL 316
Query: 283 DPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
VT+D L++ F +GE+ +VKIP GK CGFVQF +R
Sbjct: 317 SGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHR 354
>gi|115446801|ref|NP_001047180.1| Os02g0567900 [Oryza sativa Japonica Group]
gi|113536711|dbj|BAF09094.1| Os02g0567900, partial [Oryza sativa Japonica Group]
Length = 259
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 96/181 (53%), Positives = 127/181 (70%), Gaps = 7/181 (3%)
Query: 140 MPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKV 199
MP+T++ F+LNWA+Y GE+R + D +IFVGDLA DVTD +L + F Y SVKGAKV
Sbjct: 3 MPNTDRAFKLNWASYSMGEKRAELASDHSIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKV 62
Query: 200 VTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKAT 259
+ D TGRS+GYGFVRFGD++++ +MTEMNG CSTRP+RIGPA ++++
Sbjct: 63 IIDANTGRSRGYGFVRFGDDNDKTHAMTEMNGAYCSTRPIRIGPATPRRSSGDSGSSPP- 121
Query: 260 YQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFAN 319
Q ++D N TI+VGGLDP+ T+D L+ F +YG+L VKIP GK+CGFVQF N
Sbjct: 122 ------RQSDSDSTNRTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQCGFVQFVN 175
Query: 320 R 320
R
Sbjct: 176 R 176
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 76/177 (42%), Gaps = 19/177 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL + + + +F V G KVI + T S GYGF+ F +
Sbjct: 31 SIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKTHAMT 90
Query: 134 TFNGTQMPSTEQNFRLNWAT--------YGAGERRQD-DGPDFTIFVGDLAADVTDYVLQ 184
NG + + R+ AT + R+ D D + TI+VG L + T+ L+
Sbjct: 91 EMNGAY--CSTRPIRIGPATPRRSSGDSGSSPPRQSDSDSTNRTIYVGGLDPNATEDELR 148
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
+ F A Y + K+ K GFV+F + + ++ +NG + +R+
Sbjct: 149 KAF-AKYGDLASVKIPV------GKQCGFVQFVNRPDAEEALQGLNGSTIGKQAVRL 198
Score = 44.3 bits (103), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++++G L P E + F G+ S K+ KQ GF++FV+ AE LQ
Sbjct: 131 RTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQC------GFVQFVNRPDAEEALQ 184
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDD 163
NG+ + +Q RL+W A ++ + D
Sbjct: 185 GLNGSTI--GKQAVRLSWGRSPASKQSRGD 212
>gi|242042652|ref|XP_002459197.1| hypothetical protein SORBIDRAFT_02g000370 [Sorghum bicolor]
gi|241922574|gb|EER95718.1| hypothetical protein SORBIDRAFT_02g000370 [Sorghum bicolor]
Length = 238
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 108/232 (46%), Positives = 143/232 (61%), Gaps = 26/232 (11%)
Query: 42 PPPVGWTPQPVPPPSQQTQPYGVAPDASSDGI--RSLWIGDLQPWMEESYIASIFGHTGE 99
P P+ W P P T P APD+SSDG RSLWIG L WM+E Y+ + F + E
Sbjct: 4 PHPLSWADAP-PFYYHGTTP-QPAPDSSSDGAGPRSLWIGGLLHWMDEDYLYACFTTSPE 61
Query: 100 FVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATY----- 154
+S + R+KQT SEG+GF+ F H A ++L+++NG +MP++ Q+F+LNWAT
Sbjct: 62 LLSVVIRRSKQTGQSEGFGFLNFADHTTAAQILKSYNGHKMPNSVQDFKLNWATQQPAPD 121
Query: 155 ---------------GAGERRQDDGP--DFTIFVGDLAADVTDYVLQETFRAVYSSVKGA 197
+R DD + IFVGDLA DVT+Y+L F+ Y+SVK A
Sbjct: 122 KLPDPHFKLDPAMQQDVPQRHDDDNSSSEHFIFVGDLAYDVTEYMLHHLFKTRYASVKRA 181
Query: 198 KVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA 249
K++ DR TGRSKGYGFV+FGD +EQ +++TEMNG CSTRPMRIGP KK+
Sbjct: 182 KIIVDRFTGRSKGYGFVQFGDVNEQTQALTEMNGAYCSTRPMRIGPVPNKKS 233
>gi|212722006|ref|NP_001131810.1| uncharacterized protein LOC100193183 [Zea mays]
gi|194692604|gb|ACF80386.1| unknown [Zea mays]
Length = 236
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 104/210 (49%), Positives = 135/210 (64%), Gaps = 25/210 (11%)
Query: 65 APD--ASSDGI--RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFI 120
APD ASSDG RSLWIG L PWM+E Y+ F + E +S + RNKQT SEG+GF+
Sbjct: 24 APDSPASSDGAGPRSLWIGGLLPWMDEDYLYGCFTTSRELLSLVIKRNKQTGQSEGFGFL 83
Query: 121 EFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDF------------- 167
+F H AA +L+++NG +MP+ Q+F+LNWAT ++ D PDF
Sbjct: 84 KFSDHTAAAHILKSYNGQKMPNAVQDFKLNWATQQPAPKKLPD-PDFKLDLATQQERHAA 142
Query: 168 -------TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+IFVGDLA +VT Y+L F+A Y SVK AK++ D+ TG SK YGFV+FGD
Sbjct: 143 VDSSSDHSIFVGDLAYNVTGYMLHHVFKARYPSVKSAKIIFDKFTGLSKCYGFVQFGDVD 202
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
EQ++++TEMNG CSTRPMRIGP KK+A
Sbjct: 203 EQIQALTEMNGAYCSTRPMRIGPVPKKKSA 232
>gi|162312303|ref|NP_596601.2| mRNA processing factor (predicted) [Schizosaccharomyces pombe
972h-]
gi|26401571|sp|O60176.2|YG41_SCHPO RecName: Full=Uncharacterized RNA-binding protein C23E6.01c
gi|157310462|emb|CAB83010.2| mRNA processing factor (predicted) [Schizosaccharomyces pombe]
Length = 473
Score = 200 bits (509), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 113/315 (35%), Positives = 172/315 (54%), Gaps = 14/315 (4%)
Query: 16 YQQQHQQWMAYQQQSQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRS 75
+ +Q Q + +S + Q Q P+ P + S+ T YG + D + +
Sbjct: 38 FNEQDDQEVDNDYKSNDEPVQSQDPISPNMASNESGN---SENTSNYGSSRDENVYQKTT 94
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
LW+G+L+PW+ E++I ++ G+ V K+IRN+ T + GY F+EF S A + +
Sbjct: 95 LWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASPHEASSAM-SM 153
Query: 136 NGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N +P T F+LNWA+ G E+ +++IFVGDL+ +V ++ + F + Y+S
Sbjct: 154 NNKPIPGTNHLFKLNWASGGGLREKSISKASEYSIFVGDLSPNVNEFDVYSLFASRYNSC 213
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
K AK++TD T S+GYGFVRF DE++Q ++ EM G +C RP+R+G A K A
Sbjct: 214 KSAKIMTDPQTNVSRGYGFVRFTDENDQKSALAEMQGQICGDRPIRVGLATPKSKAHVFS 273
Query: 255 YQKAT---------YQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
Y Q D N+T+FVGGL V+++ LK +F +GE+V+VK
Sbjct: 274 PVNVVPVSMPPVGFYSAAQPVPQFADTANSTVFVGGLSKFVSEEELKYLFQNFGEIVYVK 333
Query: 306 IPAGKRCGFVQFANR 320
IP GK CGFVQF NR
Sbjct: 334 IPPGKGCGFVQFVNR 348
>gi|302511659|ref|XP_003017781.1| hypothetical protein ARB_04665 [Arthroderma benhamiae CBS 112371]
gi|291181352|gb|EFE37136.1| hypothetical protein ARB_04665 [Arthroderma benhamiae CBS 112371]
Length = 428
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/320 (38%), Positives = 172/320 (53%), Gaps = 55/320 (17%)
Query: 55 PSQQTQPYGVAPDASSDGIRSLW-------------------IGDLQPWMEESYIASIFG 95
P Q P G + DG +LW +G+L+ W++E++I +I+
Sbjct: 43 PGAQQDPSGSPGNQQQDGKTTLWYRSLDSSSSSSSFFYSLTVMGELEGWIDENFIRNIWY 102
Query: 96 HTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG 155
GE V+ K+IR+K + + GY F++F S AAA + L NGT MP+T++ F+LNWA+ G
Sbjct: 103 QMGEQVNVKMIRDKFSGANAGYCFVDFASPAAAAKALAV-NGTPMPNTQRPFKLNWASGG 161
Query: 156 --AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGF 213
A R++ GP+F+IFVGDL +V +YVL F++ + S K AK++TD TG S+GYGF
Sbjct: 162 GLADRSREERGPEFSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPITGLSRGYGF 221
Query: 214 VRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGE---- 269
VRF DE++Q R+++EM GV C RPMRI A K A G G
Sbjct: 222 VRFSDETDQQRALSEMQGVYCGNRPMRISTATPKNKGPAGPGGPAHMGVPGGPPGGMYPP 281
Query: 270 -----------------------------NDPNNTTIFVGGLDPSVTDDILKTVFGQYGE 300
DPNNTT+FVGGL VT+D L++ F +GE
Sbjct: 282 SMGGAGGPPGPGGPQMGYYGAAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGE 341
Query: 301 LVHVKIPAGKRCGFVQFANR 320
+ +VKIP GK CGFVQF R
Sbjct: 342 ITYVKIPPGKGCGFVQFVQR 361
>gi|19115155|ref|NP_594243.1| RNA-binding protein Csx1 [Schizosaccharomyces pombe 972h-]
gi|3121946|sp|O13759.1|CSX1_SCHPO RecName: Full=RNA-binding post-transcriptional regulator csx1
gi|2656019|emb|CAB16569.1| RNA-binding protein Csx1 [Schizosaccharomyces pombe]
Length = 632
Score = 196 bits (499), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 104/258 (40%), Positives = 151/258 (58%), Gaps = 13/258 (5%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSE---GYGFIEFVSHAAAERV 131
+LW+GDL+PWM+ ++I ++ E V+ KV+R+K ++ SE Y F++F S AAAER
Sbjct: 86 TLWMGDLEPWMDATFIQQLWASLNEPVNVKVMRSKASS-SETLISYCFVQFSSSAAAERA 144
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQ--DDGPDFTIFVGDLAADVTDYVLQETFRA 189
L +N T +P F+LNWAT G + P+F+IFVGDL D L TFR+
Sbjct: 145 LMKYNNTMIPGAHCTFKLNWATGGGIQHNNFVSRDPEFSIFVGDLLPTTEDSDLFMTFRS 204
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA 249
+Y S AK++ D TG S+ YGFVRF E EQ ++ M G LC RP+RI A+ K
Sbjct: 205 IYPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALMHMQGYLCQGRPLRISVASPKSR 264
Query: 250 A-----TGQQYQKATYQNTQGSQ--GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A + + N Q +Q DP NTT+FVGGL ++++ L+ F +G ++
Sbjct: 265 ASIAADSALGIVPTSTSNRQPNQDLCSMDPLNTTVFVGGLASNLSEKDLQVCFQPFGRIL 324
Query: 303 HVKIPAGKRCGFVQFANR 320
++KIP GK CGFVQ++ +
Sbjct: 325 NIKIPFGKGCGFVQYSEK 342
>gi|414592072|tpg|DAA42643.1| TPA: hypothetical protein ZEAMMB73_369374 [Zea mays]
Length = 235
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/210 (49%), Positives = 134/210 (63%), Gaps = 26/210 (12%)
Query: 65 APD--ASSDGI--RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFI 120
APD ASSDG RSLWIG L PWM+E Y+ F + E +S + RNKQT SEG+GF+
Sbjct: 24 APDSPASSDGAGPRSLWIGGLLPWMDEDYLYGCFTTSRELLSLVIKRNKQTGQSEGFGFL 83
Query: 121 EFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDF------------- 167
+F H AA +L+++NG +MP+ Q+F+LNWAT ++ D PDF
Sbjct: 84 KFSDHTAAAHILKSYNGQKMPNAVQDFKLNWATQQPAPKKLPD-PDFKLDLATQQERHAA 142
Query: 168 -------TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+IFVGDLA +VT Y+L F+A Y SVK AK++ D+ TG SK YGFV+FGD
Sbjct: 143 VDSSSDHSIFVGDLAYNVTGYMLHHVFKARYPSVKSAKIIFDKFTGLSKCYGFVQFGDVD 202
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
EQ++ +TEMNG CSTRPMRIGP KK+A
Sbjct: 203 EQIQ-LTEMNGAYCSTRPMRIGPVPKKKSA 231
>gi|361131740|gb|EHL03392.1| putative Uncharacterized RNA-binding protein C23E6.01c [Glarea
lozoyensis 74030]
Length = 391
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 115/299 (38%), Positives = 157/299 (52%), Gaps = 57/299 (19%)
Query: 54 PPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF 113
P +QQ G + + D +LW+G+L+PW++E++I S++ GE V+ K+IR+K +
Sbjct: 53 PFAQQGGVEGSSGSVTGDAKTTLWMGELEPWIDENFIRSVWFGMGEQVNVKMIRDKFSG- 111
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGD 173
+ GY FI+F S AAA + + NG D GP+F+IFVGD
Sbjct: 112 NAGYCFIDFSSPAAAAKA-LSLNG-----------------------DDRGPEFSIFVGD 147
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
L +V +YVL F+A + S K AK++TD +G S+GYGFVRF DE +Q R++TEM GV
Sbjct: 148 LGPEVNEYVLVSLFQARFPSCKSAKIMTDPISGMSRGYGFVRFADEQDQQRALTEMQGVY 207
Query: 234 CSTRPMRIGPAATKKA--------------------------------ATGQQYQKATYQ 261
C RPMRI A K + G Q Y
Sbjct: 208 CGNRPMRISTATPKNKSGGAGGPAGMPMQGGGGMGGGQPGGMGAPGMYSMGAPPQLGYYG 267
Query: 262 NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
Q DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 268 APQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 326
>gi|413918498|gb|AFW58430.1| nucleic acid binding protein, partial [Zea mays]
Length = 241
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 86/143 (60%), Positives = 112/143 (78%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++W+GDLQ WM+E+Y+ + FG +GE V+ KVIRN+QT SEGYGF+EF SHA+AE+ LQ
Sbjct: 99 KTIWVGDLQYWMDENYLHNCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASAEKALQ 158
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F G MP+T++ F+LNWA+Y GE+R + D +IFVGDLAADVTD +L E F + Y S
Sbjct: 159 NFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDHSIFVGDLAADVTDEMLLELFSSKYRS 218
Query: 194 VKGAKVVTDRTTGRSKGYGFVRF 216
VKGAKV+ D TGRS+GYGFVRF
Sbjct: 219 VKGAKVIIDANTGRSRGYGFVRF 241
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 19/130 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
TI+VGDL + + L F V KV+ +R TG+S+GYGFV F + +++
Sbjct: 100 TIWVGDLQYWMDENYLHNCF-GPSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASAEKALQ 158
Query: 228 EMNGVLC--STRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
G + + RP ++ A+ + G + ++ +IFVG L
Sbjct: 159 NFTGHVMPNTDRPFKLNWASY----------------SMGEKRSEVASDHSIFVGDLAAD 202
Query: 286 VTDDILKTVF 295
VTD++L +F
Sbjct: 203 VTDEMLLELF 212
>gi|290997888|ref|XP_002681513.1| predicted protein [Naegleria gruberi]
gi|284095137|gb|EFC48769.1| predicted protein [Naegleria gruberi]
Length = 292
Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 105/261 (40%), Positives = 149/261 (57%), Gaps = 21/261 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGE--FVSGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
R+LW+GDL M++ Y+ +F + S K+I+++ T S GYGF+EF S A+ V
Sbjct: 1 RTLWMGDLDDSMDDEYVKKLFANDIRPSINSVKIIKDRNTGKSIGYGFVEFASIEIAKAV 60
Query: 132 LQTFNGTQMPST-EQNFRLNWATYGAGE----------RRQDDGPD--FTIFVGDLAADV 178
L+++ G +P+ + +RLNWA G + G + +IFVGDLA DV
Sbjct: 61 LESYAGKPIPTLPNKIYRLNWAAQNQGSNPLFSSQPGGKPSSGGKENIVSIFVGDLAPDV 120
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
DY+L++TFR Y SV+GAKVV D +G SKGYGFV+F DE + +RSMTEM GV S+RP
Sbjct: 121 NDYMLEQTFRNRYPSVRGAKVVMDPKSGISKGYGFVKFADEDDMMRSMTEMQGVYISSRP 180
Query: 239 MRIGPAATKKAATG--QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFG 296
++I A + G + T T + E NTT++VG L P+ + IL+ F
Sbjct: 181 VKISHATNNFKSQGALEDLMPTTIITTDPLEQE----NTTVYVGNLSPNTDEKILREFFQ 236
Query: 297 QYGELVHVKIPAGKRCGFVQF 317
YG + VKIP CGF+ F
Sbjct: 237 GYGPITSVKIPTNSNCGFINF 257
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 20/200 (10%)
Query: 55 PSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNF 113
P +QP G + I S+++GDL P + + + F + V G KV+ + ++
Sbjct: 90 PLFSSQPGGKPSSGGKENIVSIFVGDLAPDVNDYMLEQTFRNRYPSVRGAKVVMDPKSGI 149
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQM---PSTEQNFRLNWATYGAGERRQD-------- 162
S+GYGF++F R + G + P + N+ + GA E
Sbjct: 150 SKGYGFVKFADEDDMMRSMTEMQGVYISSRPVKISHATNNFKSQGALEDLMPTTIITTDP 209
Query: 163 -DGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
+ + T++VG+L+ + + +L+E F+ Y + K+ T+ GF+ F
Sbjct: 210 LEQENTTVYVGNLSPNTDEKILREFFQG-YGPITSVKIPTNSNC------GFINFTRTEH 262
Query: 222 QLRSMTEMNGVLCSTRPMRI 241
R++ EMNG+ +R+
Sbjct: 263 AERAIIEMNGIEIQGNRVRV 282
>gi|413936668|gb|AFW71219.1| hypothetical protein ZEAMMB73_649152 [Zea mays]
Length = 483
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/212 (49%), Positives = 124/212 (58%), Gaps = 36/212 (16%)
Query: 61 PYGVAPDASSDGIRSLWIGDLQPWMEESYIA-SIFGHTGE-FVSGKVIRNKQTNFSEGYG 118
PYG P S +R+LWIGDLQ WM+E+Y+ + F + S K+IRNKQT SEGYG
Sbjct: 169 PYGTTP--GSGEVRTLWIGDLQHWMDENYLHYNAFAAVAQQIASVKIIRNKQTGHSEGYG 226
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNF----------------RLNWATYGAGERRQD 162
FIEF S A AE +LNWA+ G++R D
Sbjct: 227 FIEFSSRATAEHT----------------LMNFNGQMMPNVEMTFKLNWASASTGDKRGD 270
Query: 163 DGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
G D TIFVGDLA DVTD +L++ FRA Y SV+ A VV DR TG KGYGFVRFGD +EQ
Sbjct: 271 SGSDHTIFVGDLAHDVTDSMLEDVFRAKYPSVRRANVVVDRMTGWPKGYGFVRFGDLNEQ 330
Query: 223 LRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
+MTEMNG+L STR MRIG A KK QQ
Sbjct: 331 AHAMTEMNGMLLSTRQMRIGATANKKNRDAQQ 362
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 29/164 (17%)
Query: 153 TYGAGERRQDDGPDFTIFVGDLAADVTD-YVLQETFRAVYSSVKGAKVVTDRTTGRSKGY 211
T G+GE R T+++GDL + + Y+ F AV + K++ ++ TG S+GY
Sbjct: 173 TPGSGEVR-------TLWIGDLQHWMDENYLHYNAFAAVAQQIASVKIIRNKQTGHSEGY 225
Query: 212 GFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEND 271
GF+ F + ++ NG + M + A+ + +G G
Sbjct: 226 GFIEFSSRATAEHTLMNFNGQMMPNVEMTFK----------LNWASASTGDKRGDSG--- 272
Query: 272 PNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFV 315
++ TIFVG L VTD +L+ VF K P+ +R V
Sbjct: 273 -SDHTIFVGDLAHDVTDSMLEDVF-------RAKYPSVRRANVV 308
>gi|407925486|gb|EKG18497.1| hypothetical protein MPH_04299 [Macrophomina phaseolina MS6]
Length = 311
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/230 (43%), Positives = 134/230 (58%), Gaps = 24/230 (10%)
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDD-GPDFTIFVG 172
+ GY F++F + AA + L T NG +P++ + F+LNWA+ G + R+DD GP+++IFVG
Sbjct: 15 NAGYCFVDFQTPEAAAKAL-TLNGQMIPNSNRPFKLNWASGGGLQDRRDDRGPEYSIFVG 73
Query: 173 DLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGV 232
DL +V +YVL F+ Y S K AK+++D +G S+GYGFVRF DESEQ R++ EM GV
Sbjct: 74 DLGPEVNEYVLVSLFQGKYPSCKSAKIMSDPISGMSRGYGFVRFSDESEQQRALNEMQGV 133
Query: 233 LCSTRPMRIGPAATKKAATGQQYQKAT----------------------YQNTQGSQGEN 270
C RPMRI A K + G Y Q
Sbjct: 134 YCGNRPMRISTATPKNKSGGGPGAGPMGGMHGGPGPVGMYGMGAPPLGYYGAPQPMNQFT 193
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 194 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 243
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 81/220 (36%), Gaps = 57/220 (25%)
Query: 75 SLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL P + E + S+F G S K++ + + S GYGF+ F + +R L
Sbjct: 69 SIFVGDLGPEVNEYVLVSLFQGKYPSCKSAKIMSDPISGMSRGYGFVRFSDESEQQRALN 128
Query: 134 TFNGTQMPSTEQNFRLNWAT--------------------------YGAGE--------- 158
G + R++ AT YG G
Sbjct: 129 EMQGVY--CGNRPMRISTATPKNKSGGGPGAGPMGGMHGGPGPVGMYGMGAPPLGYYGAP 186
Query: 159 ---RRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVR 215
+ D + T+FVG L+ VT+ L+ F +G +T KG GFV+
Sbjct: 187 QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFF-------QGFGEITYVKIPPGKGCGFVQ 239
Query: 216 FGDESEQLRSMTEMNGVLCSTRPMRI---------GPAAT 246
F ++ +M G +R+ GPA T
Sbjct: 240 FVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNNSGPAGT 279
>gi|213406019|ref|XP_002173781.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
gi|212001828|gb|EEB07488.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
Length = 680
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/286 (38%), Positives = 153/286 (53%), Gaps = 45/286 (15%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERV 131
+LW+GDL+ WM+ ++I ++ GE V K++R K ++ SEG Y F++F S AAE
Sbjct: 88 TLWMGDLESWMDAAFIQQLWASLGETVHVKLMRTK-SSVSEGCVSYCFVQFSSPQAAEYA 146
Query: 132 LQTFNGTQMPSTEQNFRLNWATYG-----AGERRQDDGPDFTIFVGDLAADVTDYVLQET 186
L +N T +P T F+LNWAT G A RR+ P++++FVGDL + + L T
Sbjct: 147 LLRYNNTIIPRTHSVFKLNWATGGGIQHSAKTRRE---PEYSVFVGDLDPETHEAELYHT 203
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA- 245
F +VY S AK++ D TG S+ YGFVRF DE EQ R+++EM G LC RP+RI A+
Sbjct: 204 FHSVYPSCTSAKIIIDPVTGMSRKYGFVRFSDEREQQRALSEMQGYLCHGRPLRISVASP 263
Query: 246 -------------TKKAATGQ------------------QYQKATYQNTQGSQGENDPNN 274
T A+T +T Q QG DP N
Sbjct: 264 RSRTSISADSTTPTGAASTANGGAAASSSAVATGVTGVPSSSSSTRQPDQG-LCSIDPFN 322
Query: 275 TTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
TT+FVGGL T+ L F +G ++++KIP GK CGFVQ+ +
Sbjct: 323 TTVFVGGLFSGATEKDLFYHFSPFGNILNIKIPPGKGCGFVQYTEK 368
>gi|320580282|gb|EFW94505.1| RNA binding protein [Ogataea parapolymorpha DL-1]
Length = 398
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/271 (35%), Positives = 151/271 (55%), Gaps = 27/271 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF-----SEGYGFIEFVSHAAA 128
R+LW+GD++PW E +I ++ T + V KVI+ +Q GY F+EF + A
Sbjct: 28 RTLWMGDIEPWWNEEFITDVWAKTNKRVLVKVIKPRQNALVHQLAHSGYCFVEFETPEDA 87
Query: 129 ERVLQTFNGTQMP-STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
+ L+ NGT +P +T++ FRLNWA+ + P++++FVGDL+ T+ L F
Sbjct: 88 KEALK-LNGTIIPNTTDKLFRLNWASAATLNSQIAQTPEYSLFVGDLSPATTEAHLLALF 146
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
+ +S+VK +V+TD TG S+ +GFVRF + ++ +++ EMNG R +R+ A K
Sbjct: 147 QTHFSTVKTVRVMTDPATGLSRCFGFVRFSSDEDRQKALVEMNGKWLDGRLIRVALATPK 206
Query: 248 KAATGQQYQK------------------ATYQNTQGSQGENDPNNTTIFVGGLDPSVTDD 289
QQ++K Y Q +DP NTT+FVGGL ++T+
Sbjct: 207 HQ--NQQFRKHQIPMELDPYHAPGLPPIGYYAAPQPPPAYSDPTNTTVFVGGLSNNITEA 264
Query: 290 ILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
L ++F YG++VHVK+P GK CGFV+F R
Sbjct: 265 TLLSIFEPYGQIVHVKVPPGKGCGFVKFTQR 295
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 30/138 (21%)
Query: 24 MAYQQQSQQQQQQHQTPVP---------PPVGWTPQPVPPPSQQTQPYGVAPDASSDGIR 74
+A + QQ ++HQ P+ PP+G+ P PPP A SD
Sbjct: 202 LATPKHQNQQFRKHQIPMELDPYHAPGLPPIGYYAAPQPPP------------AYSDPTN 249
Query: 75 -SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++++G L + E+ + SIF G+ V KV K G GF++F AER ++
Sbjct: 250 TTVFVGGLSNNITEATLLSIFEPYGQIVHVKVPPGK------GCGFVKFTQRTDAERAIE 303
Query: 134 TFNGTQMPSTEQNFRLNW 151
G + + RL+W
Sbjct: 304 QLQGYVIDGSR--VRLSW 319
>gi|449472161|ref|XP_004153512.1| PREDICTED: polyadenylate-binding protein RBP45-like, partial
[Cucumis sativus]
Length = 176
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/119 (72%), Positives = 99/119 (83%), Gaps = 2/119 (1%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A+ D +R+LWIGDLQ WM+E+YI + F HTGE S KVIRNKQT SEGYGFIEF++ A
Sbjct: 60 ANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPA 119
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQET 186
AERVLQT+NGT MP+ QNFRLNWA+ AGE+RQDD PD+TIFVGDLA DVTDYVLQET
Sbjct: 120 AERVLQTYNGTAMPNGAQNFRLNWAS--AGEKRQDDSPDYTIFVGDLAGDVTDYVLQET 176
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 17/125 (13%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++GDL + + + F A V KV+ ++ TG+S+GYGF+ F R +
Sbjct: 67 TLWIGDLQYWMDENYIFNCF-AHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQ 125
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
NG G Q + + + G + ++D + TIFVG L VT
Sbjct: 126 TYNGT---------------AMPNGAQNFRLNWA-SAGEKRQDDSPDYTIFVGDLAGDVT 169
Query: 288 DDILK 292
D +L+
Sbjct: 170 DYVLQ 174
>gi|449471357|ref|XP_004153285.1| PREDICTED: polyadenylate-binding protein RBP47B-like, partial
[Cucumis sativus]
Length = 218
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 80/124 (64%), Positives = 98/124 (79%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S+D +++LWIGDLQPWM+E+Y+ + F HTGE S KVI NKQT SEGYGF+EF SH A
Sbjct: 95 STDEVKTLWIGDLQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTA 154
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
E+VLQ +NGT MP+TE FRLNWAT+ A +RR D G D +IFVGDLAADVTD +LQETF
Sbjct: 155 EKVLQNYNGTIMPNTELPFRLNWATFSANDRRPDTGSDLSIFVGDLAADVTDAILQETFS 214
Query: 189 AVYS 192
+ Y+
Sbjct: 215 SRYT 218
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 27/135 (20%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++GDL + + L F A V KV+ ++ TG+S+GYGFV F + + +
Sbjct: 101 TLWIGDLQPWMDETYLNNCF-AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQ 159
Query: 228 EMNGVLC--STRPMRIG----PAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGG 281
NG + + P R+ A ++ TG ++ +IFVG
Sbjct: 160 NYNGTIMPNTELPFRLNWATFSANDRRPDTG--------------------SDLSIFVGD 199
Query: 282 LDPSVTDDILKTVFG 296
L VTD IL+ F
Sbjct: 200 LAADVTDAILQETFS 214
>gi|302307679|ref|NP_984403.2| ADR307Wp [Ashbya gossypii ATCC 10895]
gi|299789115|gb|AAS52227.2| ADR307Wp [Ashbya gossypii ATCC 10895]
Length = 566
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/280 (38%), Positives = 151/280 (53%), Gaps = 41/280 (14%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
L++GDL P E I I+ GE V K+I+N + GY F+EF S+ AA L
Sbjct: 54 LYMGDLDPSWTEGDIKQIWATLGEANVQVKLIKNSSGGGNSGYCFVEFPSNLAATNALLK 113
Query: 135 FNGTQMP-STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
G +P + +LNWA++ G +F+IFVGDLA +VT+ L E F + YSS
Sbjct: 114 -TGLPIPVDASRTLKLNWASFAT-----TPGSEFSIFVGDLAPNVTESQLFELFISRYSS 167
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA---- 249
AK+V D+ TG SKGYGFV+FG+E+EQ RS+ EM GV + R +R+ + K+
Sbjct: 168 TLNAKIVFDQGTGVSKGYGFVKFGNEAEQQRSLLEMQGVFLNGRAIRVSTTSKNKSRFQS 227
Query: 250 ----ATGQQYQKATYQNTQG-SQGEN------------------------DPNNTTIFVG 280
+ +T N+ G +QG N DPNNTT+F+G
Sbjct: 228 GNPASAAPASPASTAVNSPGLAQGSNVQTLLQQSQFIYPVQQQPALSQFADPNNTTVFIG 287
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
GL VT+D L+ F +G++V+VKIP GK CGFVQ+ +R
Sbjct: 288 GLSSLVTEDELRAYFQPFGQIVYVKIPVGKGCGFVQYVDR 327
>gi|374107618|gb|AEY96526.1| FADR307Wp [Ashbya gossypii FDAG1]
Length = 565
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/280 (38%), Positives = 151/280 (53%), Gaps = 41/280 (14%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
L++GDL P E I I+ GE V K+I+N + GY F+EF S+ AA L
Sbjct: 54 LYMGDLDPSWTEGDIKQIWATLGEANVQVKLIKNSSGGGNSGYCFVEFPSNLAATNALLK 113
Query: 135 FNGTQMP-STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
G +P + +LNWA++ G +F+IFVGDLA +VT+ L E F + YSS
Sbjct: 114 -TGLPIPVDASRTLKLNWASFAT-----TPGSEFSIFVGDLAPNVTESQLFELFISRYSS 167
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA---- 249
AK+V D+ TG SKGYGFV+FG+E+EQ RS+ EM GV + R +R+ + K+
Sbjct: 168 TLNAKIVFDQGTGVSKGYGFVKFGNEAEQQRSLLEMQGVFLNGRAIRVSTTSKNKSRFQS 227
Query: 250 ----ATGQQYQKATYQNTQG-SQGEN------------------------DPNNTTIFVG 280
+ +T N+ G +QG N DPNNTT+F+G
Sbjct: 228 GNPASAAPASPASTAVNSPGLAQGSNVQTLLQQSQFIYPVQQQPALSQFADPNNTTVFIG 287
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
GL VT+D L+ F +G++V+VKIP GK CGFVQ+ +R
Sbjct: 288 GLSSLVTEDELRAYFQPFGQIVYVKIPVGKGCGFVQYVDR 327
>gi|323450795|gb|EGB06674.1| hypothetical protein AURANDRAFT_28594, partial [Aureococcus
anophagefferens]
Length = 319
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/275 (36%), Positives = 146/275 (53%), Gaps = 25/275 (9%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D ++SLW+G++QP E Y+ SI+ + + K++R++ T + GYGF+EF SHA A
Sbjct: 20 DDVKSLWVGEVQPDWTEEYMRSIYAECNKRFNVKIMRDRATGTAAGYGFLEFESHADAAE 79
Query: 131 VLQTFNGTQMPSTEQNFRLNWAT--------------YGAGERR--QDDGP----DFTIF 170
VL+ + +P T L W YGAG GP D++IF
Sbjct: 80 VLRLYEDKPIPGTPFKCVLRWGGGHGTAAAKPKGGTPYGAGTMHPVGYSGPPPQADWSIF 139
Query: 171 VGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMN 230
VGDL VT+ L F Y S+ K+V D +TG SKG+GF++FG E+E+ +M EM+
Sbjct: 140 VGDLDYTVTEQQLHGAFAKKYRSILSTKLVIDMSTGLSKGFGFIKFGSEAERDSAMNEMH 199
Query: 231 GVLCSTRPMRIGPAAT-----KKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
G R +R A T ++A QQ Q + + NT +FVGGLD S
Sbjct: 200 GQYVGERAIRCTLATTREEREREAKMNQQQQMYDPSRLHAPKATEEGENTCVFVGGLDES 259
Query: 286 VTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
V+ D+L+ FG G++ +++IP G+ CGFV F +R
Sbjct: 260 VSPDMLRHHFGLLGDIAYIRIPPGRGCGFVGFVHR 294
>gi|210075649|ref|XP_502423.2| YALI0D04917p [Yarrowia lipolytica]
gi|199425763|emb|CAG80611.2| YALI0D04917p [Yarrowia lipolytica CLIB122]
Length = 430
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 156/288 (54%), Gaps = 49/288 (17%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHT---GEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
+ ++++GDL+PWM+E+ I +++ ++ K+IR+K T+ S YGFI+F S A
Sbjct: 1 MSTIYMGDLEPWMDEAAIKNMWAQVMGPDTNINVKLIRDKFTD-SINYGFIDFASPELAA 59
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP-DFTIFVGDLAADVTDYVLQETFR 188
L+ FNG +P T++ F+L GE D P +F+IFVGDLA + T+ L + F+
Sbjct: 60 AALK-FNGKPIPGTDRLFKL-------GEDNGDGAPVEFSIFVGDLAPESTEPELLQAFK 111
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ Y S + AK++TD TG S+GYGFVRF E +Q +++ EM G + +RP+R+ A K
Sbjct: 112 SRYESCRAAKIMTDPVTGLSRGYGFVRFSSEEDQQKALQEMQGYMLGSRPLRVSTATPKN 171
Query: 249 AATGQQYQ---------KATYQ----------NTQGSQGE-----------------NDP 272
Q Y A YQ + G+ D
Sbjct: 172 RHHHQPYMQFQPQQFQPPAHYQQLHSQHPFPHHPNGAPSHQVHQPFYGGPAHPLNQFTDA 231
Query: 273 NNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
NNTT+FVGGL SV++D L+ F +G++ +VKIP GK CGFVQ+ R
Sbjct: 232 NNTTVFVGGLSSSVSEDELRQYFQGFGDITYVKIPPGKGCGFVQYVQR 279
>gi|254566455|ref|XP_002490338.1| RNA binding protein that negatively regulates growth rate
[Komagataella pastoris GS115]
gi|238030134|emb|CAY68057.1| RNA binding protein that negatively regulates growth rate
[Komagataella pastoris GS115]
gi|328350732|emb|CCA37132.1| Uncharacterized RNA-binding protein C23E6.01c [Komagataella
pastoris CBS 7435]
Length = 506
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 96/274 (35%), Positives = 150/274 (54%), Gaps = 29/274 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF-----------SEGYGFIEF 122
R+LW+GDL+PW E I ++ G+ V K+IR++ + GY F+EF
Sbjct: 52 RTLWMGDLEPWWVEENIIQLWQQLGQSVRVKLIRSRHNRSPNPNSSLPPPQNAGYCFVEF 111
Query: 123 VSHAAAERVLQTFNGTQMP-STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDY 181
H A + L NG+ +P S+ + FRLNWA+ + + P +++FVGDL+ T+
Sbjct: 112 ERHEDALQAL-ALNGSIVPRSSGRLFRLNWASGPTLQSQIPPTPQYSLFVGDLSPSTTEA 170
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
L F+ YSS++ +V+TD TG S+ +GFVRF +E ++ R++ EM+G+ RP+R+
Sbjct: 171 HLLALFQPNYSSIQSVRVMTDPATGSSRCFGFVRFTEEEDRQRALHEMSGIWLGGRPIRV 230
Query: 242 GPAATKKAATGQQYQKATY---------------QNTQGSQGENDPNNTTIFVGGLDPSV 286
AT + A Q Q + N+ NDP N+T+FVGGL V
Sbjct: 231 A-LATPRGAGHQPVQMQQHLQYAPSAPMVPQFASNNSSSRNIYNDPTNSTVFVGGLAAGV 289
Query: 287 TDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
+++ L T+F +G + +KIP GK CGFV+F+ R
Sbjct: 290 SEETLFTLFEPFGSISSIKIPRGKGCGFVKFSTR 323
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 101/249 (40%), Gaps = 43/249 (17%)
Query: 75 SLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SL++GDL P E+++ ++F + S +V+ + T S +GF+ F +R L
Sbjct: 157 SLFVGDLSPSTTEAHLLALFQPNYSSIQSVRVMTDPATGSSRCFGFVRFTEEEDRQRALH 216
Query: 134 TFNGTQMPSTEQNFRLNWAT-YGAGERR-----------------------------QDD 163
+G + + R+ AT GAG + +D
Sbjct: 217 EMSGIWL--GGRPIRVALATPRGAGHQPVQMQQHLQYAPSAPMVPQFASNNSSSRNIYND 274
Query: 164 GPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQL 223
+ T+FVG LAA V++ L F + S+ K+ R KG GFV+F E
Sbjct: 275 PTNSTVFVGGLAAGVSEETLFTLFEP-FGSISSIKIP------RGKGCGFVKFSTREEAE 327
Query: 224 RSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATY-QNTQGSQGENDPNNTTIFVGGL 282
+++ M+G L +R+ + + + Q + Q+ S G DP + G+
Sbjct: 328 NAISGMHGFLIGGSRVRL--SWGRSSLPNQHTHSHPHPQHLMMSPGVFDPMGRNGGMYGI 385
Query: 283 DPSVTDDIL 291
P V +L
Sbjct: 386 PPGVAPGVL 394
>gi|320584167|gb|EFW98378.1| RNA-binding post-transcriptional regulator csx1 [Ogataea
parapolymorpha DL-1]
Length = 485
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 112/306 (36%), Positives = 167/306 (54%), Gaps = 40/306 (13%)
Query: 53 PPPSQQTQPYGVAPDASSDGIRS-----LWIGDLQPWMEESYI----ASIFGHTGEFV-S 102
PP SQ TQ + + S+G ++ LW+GDL +E+ I +S+ G V S
Sbjct: 21 PPASQYTQSSQL--NGQSNGQQNAQTPQLWMGDLDQRWDETTIKQIWSSVLAPLGILVHS 78
Query: 103 GKVIRNKQTNFSE----GYGFIEFVSHAAAERVLQTFNGTQMPSTE--QNFRLNWATYGA 156
K+IR+KQ+ E GY FI F + +VL+ FNG +P T + FRLNW++ +
Sbjct: 79 VKLIRDKQSMNLELANAGYCFIRFHNFEDCYKVLELFNGKPIPGTNNVRFFRLNWSSANS 138
Query: 157 GERR----QDDG-PDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGY 211
Q G +++IFVGDL VT+ L + F+A Y S GAKV+ D TG KGY
Sbjct: 139 SGANATAFQPKGQSEYSIFVGDLPQTVTEQSLLQAFQARYPSCSGAKVMIDPATGHLKGY 198
Query: 212 GFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGE-- 269
GFV+F +E++Q R++ EM G + RP+R+ A+ + A+ +Q G+
Sbjct: 199 GFVKFLNETDQKRALIEMQGYVLLGRPIRVSTASKSQTNAAANSSFASAMPSQDGLGQLK 258
Query: 270 ---------------NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGF 314
NDPNNTT+F+GGL+ +++ L+ +F +YG++ +VKIP GK CGF
Sbjct: 259 VNVPSLPQTAPLQYYNDPNNTTVFIGGLNVPISEMQLRALFSRYGDISYVKIPPGKNCGF 318
Query: 315 VQFANR 320
VQF +R
Sbjct: 319 VQFFHR 324
>gi|384245275|gb|EIE18770.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 351
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 145/252 (57%), Gaps = 7/252 (2%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S D ++L++G+L P++ ++ + IF G+ K+I++K T S GYGF++F+ H AA
Sbjct: 17 SGDAAKALYVGNLHPFVTDAMLQEIFSTLGQVGEIKIIKDKLTGLSAGYGFVQFLDHRAA 76
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
+ LQ+ NG + Q R+NWA ++R+D F IFVGDLA+D+ D +L E F+
Sbjct: 77 DMALQSLNGRVLHG--QELRVNWAFQ--KDQREDSASQFQIFVGDLASDINDKLLCEAFQ 132
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ A+V+ D TGRSKGYGFV F ++ +++++M+G + +R +R G A K+
Sbjct: 133 SC--GCADARVMWDHNTGRSKGYGFVSFKTRADAEQALSQMSGTMLGSRRIRCGWAQHKQ 190
Query: 249 AATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA 308
+ + +T S+ + DP N ++VG L P V+D L+T Q+G ++ VKI
Sbjct: 191 ENSQASFAAVDRVSTL-SRAQADPENANVYVGNLAPDVSDAELQTAVSQFGAVLDVKIYR 249
Query: 309 GKRCGFVQFANR 320
F QFA+
Sbjct: 250 KGGYAFAQFASH 261
>gi|406602666|emb|CCH45778.1| Nucleolysin TIA-1 isoform [Wickerhamomyces ciferrii]
Length = 485
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 152/309 (49%), Gaps = 76/309 (24%)
Query: 76 LWIGDLQPWMEESYIASIFGHTG-EFVSGKVIRNK-QTNFSE-GYGFIEFVSHAAAERVL 132
LW+G+L P+ +E+ I SI+ G ++ K+I+ K Q F+ GY FIEF + A L
Sbjct: 43 LWMGELDPFWDENSIKSIWLSLGFNNINVKLIKEKIQQGFNNAGYCFIEFPNIEQASNAL 102
Query: 133 QTFNGTQMPSTEQNFRLNWATYG---------------AGERRQDDGPDFTIFVGDLAAD 177
+ NG ++P+T ++ +LNWA+ G G R + +IFVGDLA D
Sbjct: 103 NS-NGLKIPNTNKSLKLNWASGGQNSNNHNNNNNNNGSIGYNRNE----VSIFVGDLAPD 157
Query: 178 VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTR 237
V+D +L E F + Y SV G K++ D TG SKGYGFVRF +E EQ R++ EM G + + R
Sbjct: 158 VSDTILYEYFGSKYPSVSGTKIMIDSLTGGSKGYGFVRFINELEQKRALVEMQGAILNGR 217
Query: 238 PMRIGPAATKKAATG--------------------------------------------- 252
P+R+ A K
Sbjct: 218 PIRVSTAVPKNRQQQQGQQQGGGFNGNQGFNGSRFNNNLQPLQSSIPSSSGPSQQILNGL 277
Query: 253 -QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKR 311
QYQ Q T DPNNTT+F+GGL VT+D L+ F +G++ +VKIP GK
Sbjct: 278 ESQYQPPLTQFT-------DPNNTTVFIGGLSSIVTEDELRLYFQPFGDITYVKIPVGKG 330
Query: 312 CGFVQFANR 320
CGFVQ+ R
Sbjct: 331 CGFVQYVTR 339
>gi|190346145|gb|EDK38159.2| hypothetical protein PGUG_02257 [Meyerozyma guilliermondii ATCC
6260]
Length = 681
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/347 (32%), Positives = 164/347 (47%), Gaps = 78/347 (22%)
Query: 51 PVPPPSQQTQPYGVAPD--ASSDGIRSLWIGDLQPWMEESYIASI-FGHTGEFVSGKVIR 107
P PP S Q D AS+D R+LW+GDL PW++E+ IA + + G+ V+ K+I+
Sbjct: 28 PKPPVSTQQSSAAAESDTIASNDAPRTLWMGDLDPWLDEAAIADLWYQLLGKKVTIKIIK 87
Query: 108 NKQTNFSEG--------YGFIEFVSHAAAERVLQTFNGTQMPST---------------E 144
K S Y F+EF S+ A++ L + NG +P +
Sbjct: 88 PKNVRGSMSSSGLSHSGYCFVEFESYEDAQQAL-SLNGQLLPDIAMPSQQSFPNNPDNQK 146
Query: 145 QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY-SSVKGAKVVTDR 203
+ FRLNWA+ GP++++FVGDL+A T+ L F+ + +S+K +V+TD
Sbjct: 147 KYFRLNWASGATLTAPIVQGPEYSLFVGDLSASTTEAHLLAFFQKSFPNSIKTVRVMTDP 206
Query: 204 TTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT------------ 251
TG+S+ +GFVRF DESE+ R++ EMNG RP+R+ A + +
Sbjct: 207 VTGKSRCFGFVRFTDESERQRALVEMNGAWFGGRPLRVALATPRSSGKRFGFQNMYPFWG 266
Query: 252 -GQQYQKATYQNTQGS-------------------------------------QGENDPN 273
G Y Y GS Q DPN
Sbjct: 267 GGAPYYPYGYAGAPGSPDYGNMGGLNEEDDYGGAPPPPPPPPPPGQIPYPPPVQQYTDPN 326
Query: 274 NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
NTT+FVGGL V + L T+F Q+G + +KIP GK CGFV++ NR
Sbjct: 327 NTTVFVGGLSSDVNEQTLFTLFKQFGIIQQIKIPPGKNCGFVKYTNR 373
>gi|410924257|ref|XP_003975598.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Takifugu rubripes]
Length = 340
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 93/212 (43%), Positives = 133/212 (62%), Gaps = 10/212 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL P+MEE +I F GE +G K+I +K T S GY F+E A+ ER +Q
Sbjct: 7 SLWMGDLDPYMEEDFIKQAFSAMGESPTGVKIITHKITGGSAGYCFVELADEASVERCVQ 66
Query: 134 TFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG +R + GP+F++FVGDLA+DV D+ LQ+ F+ Y
Sbjct: 67 RLNGKLVPGSNPPRKFKLNYATYG---KRPEAGPEFSVFVGDLASDVQDFQLQQVFKN-Y 122
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK--KA 249
S KGAKVVTD+ G S+GYGFV+FG+ESEQ +++ E G + S +P+R+ A K K
Sbjct: 123 PSCKGAKVVTDQY-GYSRGYGFVKFGEESEQKKAIEECQGTMLSGKPLRLSVAVAKSQKI 181
Query: 250 ATGQQYQKATYQNTQGSQGENDPNNTTIFVGG 281
++ Q Q Y + SQ +N ++ GG
Sbjct: 182 SSYQGGQGQNYSSYNQSQSNYYGSNNSVAQGG 213
>gi|146421272|ref|XP_001486586.1| hypothetical protein PGUG_02257 [Meyerozyma guilliermondii ATCC
6260]
Length = 681
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 164/347 (47%), Gaps = 78/347 (22%)
Query: 51 PVPPPSQQTQPYGVAPD--ASSDGIRSLWIGDLQPWMEESYIASI-FGHTGEFVSGKVIR 107
P PP S Q D AS+D R+LW+GDL PW++E+ IA + + G+ V+ K+I+
Sbjct: 28 PKPPVSTQQSSAAAESDTIASNDAPRTLWMGDLDPWLDEAAIADLWYQLLGKKVTIKIIK 87
Query: 108 NKQTNFSEG--------YGFIEFVSHAAAERVLQTFNGTQMPST---------------E 144
K S Y F+EF S+ A++ L + NG +P +
Sbjct: 88 PKNVRGSMSSSGLSHSGYCFVEFESYEDAQQAL-SLNGQLLPDIAMPSQQLFPNNPDNQK 146
Query: 145 QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY-SSVKGAKVVTDR 203
+ FRLNWA+ GP++++FVGDL+A T+ L F+ + +S+K +V+TD
Sbjct: 147 KYFRLNWASGATLTAPIVQGPEYSLFVGDLSASTTEAHLLAFFQKSFPNSIKTVRVMTDP 206
Query: 204 TTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKA----- 258
TG+ + +GFVRF DESE+ R++ EMNG RP+R+ A + + +Q
Sbjct: 207 VTGKLRCFGFVRFTDESERQRALVEMNGAWFGGRPLRVALATPRSSGKRFGFQNMYPFWG 266
Query: 259 -----------------TYQNTQGSQGEN----------------------------DPN 273
Y N G E+ DPN
Sbjct: 267 GGAPYYPYGYAGAPGLPDYGNMGGLNEEDDYGGAPPPPPPPPPPGQIPYPPPVQQYTDPN 326
Query: 274 NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
NTT+FVGGL V + L T+F Q+G + +KIP GK CGFV++ NR
Sbjct: 327 NTTVFVGGLSSDVNEQTLFTLFKQFGIIQQIKIPPGKNCGFVKYTNR 373
>gi|255714705|ref|XP_002553634.1| KLTH0E03520p [Lachancea thermotolerans]
gi|238935016|emb|CAR23197.1| KLTH0E03520p [Lachancea thermotolerans CBS 6340]
Length = 516
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 156/299 (52%), Gaps = 41/299 (13%)
Query: 57 QQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGE-FVSGKVIRNKQTNFSE 115
TQ + + S+ SL++GDL P +E+ I +++ + GE V K+IRN +
Sbjct: 26 HHTQSHSSPAEQSASRSNSLYMGDLDPSWDENAIRAVWANLGEPNVQVKLIRNSGSTGGS 85
Query: 116 G-YGFIEFVSHAAAERVLQTFNGTQMPSTEQNF-RLNWATYGAGERRQDDGPDFTIFVGD 173
Y F+EF SH A L NG +P+ + +LNWA++ G + ++FVGD
Sbjct: 86 SGYCFVEFPSHLNASNALLK-NGLLIPNARNRYLKLNWASFATAP-----GNEHSVFVGD 139
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
+A +V++ L E F + Y+S AK+V D+ TG SKGYGFV+FG ESEQ R++ EM GV
Sbjct: 140 IAPNVSEAQLFELFISRYASTLNAKIVFDQMTGVSKGYGFVKFGQESEQQRALLEMQGVF 199
Query: 234 CSTRPMRIGPAATKKA------------------ATGQQYQKATYQNTQGSQGE------ 269
+ R +R+ + ++ QQ +A N Q +
Sbjct: 200 LNGRAVRVSTTSKNRSKFQQPLQQQQQPYMQQQQPYVQQQARAPAFNNGNVQSQFIYPVQ 259
Query: 270 --------NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DPNNTT+F+GGL V++D L+ F +G +V+VKIP GK CGFVQ+ +R
Sbjct: 260 QQPTLTQYTDPNNTTVFIGGLSSLVSEDELRAYFQPFGSIVYVKIPVGKGCGFVQYVDR 318
>gi|302841234|ref|XP_002952162.1| hypothetical protein VOLCADRAFT_32547 [Volvox carteri f.
nagariensis]
gi|300262427|gb|EFJ46633.1| hypothetical protein VOLCADRAFT_32547 [Volvox carteri f.
nagariensis]
Length = 193
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/164 (49%), Positives = 108/164 (65%), Gaps = 9/164 (5%)
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
DF++FVGDL +V D+ L+ FR + SV+ AKV+TD TGRSKGYGFVRFG E+E+ R+
Sbjct: 3 DFSLFVGDLPPEVHDHFLESFFRQYFPSVRSAKVMTDPVTGRSKGYGFVRFGSEAERDRA 62
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATG---------QQYQKATYQNTQGSQGENDPNNTT 276
+ EMNGV S+RP+R+ A ++ G G+ GE DPNNTT
Sbjct: 63 VVEMNGVFISSRPVRVSVATARRIDGGPLVPGGGSRVPGSGPGGGGGGGALGEADPNNTT 122
Query: 277 IFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
+F+GGL VT+D L+ VFG+YGE+++ KIP GK CGFVQF +R
Sbjct: 123 LFIGGLSSGVTEDQLRGVFGRYGEIIYTKIPPGKGCGFVQFIDR 166
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 87/197 (44%), Gaps = 43/197 (21%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SL++GDL P + + ++ S F V S KV+ + T S+GYGF+ F S A +R +
Sbjct: 5 SLFVGDLPPEVHDHFLESFFRQYFPSVRSAKVMTDPVTGRSKGYGFVRFGSEAERDRAVV 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGP---------------------------- 165
NG + S + R++ AT RR D GP
Sbjct: 65 EMNGVFISS--RPVRVSVAT----ARRIDGGPLVPGGGSRVPGSGPGGGGGGGALGEADP 118
Query: 166 -DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLR 224
+ T+F+G L++ VT ++ R V+ G + T G KG GFV+F D
Sbjct: 119 NNTTLFIGGLSSGVT----EDQLRGVFGRY-GEIIYTKIPPG--KGCGFVQFIDRQAAEY 171
Query: 225 SMTEMNGVLCSTRPMRI 241
+M E+NG + +RI
Sbjct: 172 AMQEVNGQIIGGSSVRI 188
>gi|320165313|gb|EFW42212.1| nucleic acid binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 1042
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 114/177 (64%), Gaps = 8/177 (4%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW GDL+P +ES+I+S+FG GE V G K+I+N+ T GY F++F + A RVL
Sbjct: 5 LWFGDLEPSWDESFISSLFGQAGEPVVGVKIIKNRLTGGPAGYCFVDFGNSDRAVRVLHA 64
Query: 135 FNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG Q+P + + FRLN A Y R + P++++FVGDL ADVTD+ L F+ +Y+
Sbjct: 65 LNGAQIPGLDPSRRFRLNLALYSGATRNE---PEYSLFVGDLTADVTDFQLHSFFKQLYA 121
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKK 248
S K AKVV D+ G KG+GFVRF D ++ LR++ EMNG + C +PMR+ A K+
Sbjct: 122 SCKTAKVVVDQ-AGTPKGFGFVRFTDSNDCLRALLEMNGAVGCGGKPMRVSAATPKR 177
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 37/49 (75%)
Query: 270 NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFA 318
+D NTT++VGGL P V+ + LK +F +G++V V+IP GK CGFVQFA
Sbjct: 579 DDSINTTVYVGGLSPHVSAEELKAIFSLFGDIVGVRIPQGKACGFVQFA 627
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 67/162 (41%), Gaps = 29/162 (17%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++ GDL + + F V G K++ +R TG GY FV FG+ +R +
Sbjct: 4 CLWFGDLEPSWDESFISSLFGQAGEPVVGVKIIKNRLTGGPAGYCFVDFGNSDRAVRVLH 63
Query: 228 EMNGV----LCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLD 283
+NG L +R R+ A Y AT N+P ++FVG L
Sbjct: 64 ALNGAQIPGLDPSRRFRLNLAL---------YSGAT---------RNEPE-YSLFVGDLT 104
Query: 284 PSVTDDILKTVFGQ-YGELVHVKIP---AG--KRCGFVQFAN 319
VTD L + F Q Y K+ AG K GFV+F +
Sbjct: 105 ADVTDFQLHSFFKQLYASCKTAKVVVDQAGTPKGFGFVRFTD 146
>gi|414592073|tpg|DAA42644.1| TPA: hypothetical protein ZEAMMB73_369374 [Zea mays]
gi|414592074|tpg|DAA42645.1| TPA: hypothetical protein ZEAMMB73_369374 [Zea mays]
gi|414592075|tpg|DAA42646.1| TPA: hypothetical protein ZEAMMB73_369374 [Zea mays]
Length = 207
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 114/184 (61%), Gaps = 25/184 (13%)
Query: 65 APD--ASSDGI--RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFI 120
APD ASSDG RSLWIG L PWM+E Y+ F + E +S + RNKQT SEG+GF+
Sbjct: 24 APDSPASSDGAGPRSLWIGGLLPWMDEDYLYGCFTTSRELLSLVIKRNKQTGQSEGFGFL 83
Query: 121 EFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDF------------- 167
+F H AA +L+++NG +MP+ Q+F+LNWAT ++ D PDF
Sbjct: 84 KFSDHTAAAHILKSYNGQKMPNAVQDFKLNWATQQPAPKKLPD-PDFKLDLATQQERHAA 142
Query: 168 -------TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+IFVGDLA +VT Y+L F+A Y SVK AK++ D+ TG SK YGFV+FGD
Sbjct: 143 VDSSSDHSIFVGDLAYNVTGYMLHHVFKARYPSVKSAKIIFDKFTGLSKCYGFVQFGDVD 202
Query: 221 EQLR 224
EQ++
Sbjct: 203 EQIQ 206
>gi|384495849|gb|EIE86340.1| hypothetical protein RO3G_11051 [Rhizopus delemar RA 99-880]
Length = 1099
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 140/252 (55%), Gaps = 25/252 (9%)
Query: 78 IGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNG 137
+G+L WM+E+Y+ ++ + G VS ++ +K + Y FI+F++ AA + L TFNG
Sbjct: 1 MGELDSWMDENYLRQLWWNLGHEVSCRISVDK---YGANYAFIDFLTREAASKSLITFNG 57
Query: 138 TQMPSTEQNFRLNWATYGAGERRQDDGP--------DFTIFVGDLAADVTDYVLQETFRA 189
TQ+P+T + F+LNW+ + P D+ IFVGDL ADV D +L TF++
Sbjct: 58 TQIPNTNKVFKLNWSNRDSNGMPLLQRPTLMSNFLGDYCIFVGDLRADVDDNILLTTFQS 117
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK-K 248
Y S AKV+ D TG SKG+GFV+F DE EQ RS+ EM G + +R+ A K K
Sbjct: 118 RYKSAASAKVMVDPATGFSKGFGFVKFFDEIEQKRSLEEMQGAYVGSSRIRVSVARPKAK 177
Query: 249 AATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA 308
TG G + TT+FVGGL+ ++T++ L+ FG +G +V VKI
Sbjct: 178 IETGPV--------VSGPE-----EITTVFVGGLNNTITEEELRAYFGTFGNIVAVKIIP 224
Query: 309 GKRCGFVQFANR 320
K F+Q+ +
Sbjct: 225 LKNIAFIQYEKK 236
>gi|363742248|ref|XP_417743.3| PREDICTED: uncharacterized protein LOC419597 [Gallus gallus]
Length = 287
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 115/177 (64%), Gaps = 8/177 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++++ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFVSRAFATMGELVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMPST--EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + F+LN+ATYG ++ D+ P++++FVGDL ADV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTADVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
S +G KVV D+ G SKGYGFV+F DE EQ R++TE G + ++P+R+ A K
Sbjct: 121 PSCRGGKVVLDQ-AGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPK 176
>gi|344287494|ref|XP_003415488.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Loxodonta africana]
Length = 287
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 117/179 (65%), Gaps = 8/179 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGE-FVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE VS K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVVSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
S +G KVV D+ TG SKGYGFV+F DE EQ R++TE G + ++P+R+ A K +
Sbjct: 121 PSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 178
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F + +V K++ +R TG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVVSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT Y ATY G Q +N P ++FVG L P V
Sbjct: 64 KING-----KPL---PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVD 108
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQFANR 320
D +L F + G++V + K GFV+F +
Sbjct: 109 DGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDE 147
>gi|291400054|ref|XP_002716363.1| PREDICTED: tRNA selenocysteine associated protein 1 [Oryctolagus
cuniculus]
Length = 287
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 116/179 (64%), Gaps = 8/179 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMPST--EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + +LN+ATYG ++ D+ P++++FVGDL ADV + +L E F VY
Sbjct: 64 KINGKPLPGATPAKRLKLNYATYG---KQPDNSPEYSLFVGDLTADVDEGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
S +G KVV D+ TG SKGYGFV+F DE EQ R++TE G + ++PMR+ A K +
Sbjct: 121 PSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPMRLSVAIPKAS 178
>gi|115495097|ref|NP_001069435.1| tRNA selenocysteine 1-associated protein 1 [Bos taurus]
gi|122145885|sp|Q1RMJ7.1|TSAP1_BOVIN RecName: Full=tRNA selenocysteine 1-associated protein 1; AltName:
Full=tRNA selenocysteine-associated protein 1
gi|92098413|gb|AAI14859.1| TRNA selenocysteine 1 associated protein 1 [Bos taurus]
gi|296490008|tpg|DAA32121.1| TPA: tRNA selenocysteine 1-associated protein 1 [Bos taurus]
gi|440905999|gb|ELR56315.1| tRNA selenocysteine 1-associated protein 1 [Bos grunniens mutus]
Length = 287
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 117/179 (65%), Gaps = 8/179 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
S +G KVV D+ TG SKGYGFV+F DE EQ R++TE G + ++P+R+ A K +
Sbjct: 121 PSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAIGLGSKPVRLSVAIPKAS 178
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F + +V K++ +R TG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT Y ATY G Q +N P ++FVG L P V
Sbjct: 64 KING-----KPL---PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVD 108
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQFANR 320
D +L F + G++V + K GFV+F +
Sbjct: 109 DGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDE 147
>gi|426221836|ref|XP_004005112.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Ovis aries]
Length = 287
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 117/179 (65%), Gaps = 8/179 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
S +G KVV D+ TG SKGYGFV+F DE EQ R++TE G + ++P+R+ A K +
Sbjct: 121 PSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAIGLGSKPVRLSVAIPKAS 178
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F + +V K++ +R TG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT Y ATY G Q +N P ++FVG L P V
Sbjct: 64 KING-----KPL---PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVD 108
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQFANR 320
D +L F + G++V + K GFV+F +
Sbjct: 109 DGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDE 147
>gi|73950095|ref|XP_535338.2| PREDICTED: tRNA selenocysteine 1-associated protein 1 isoform 1
[Canis lupus familiaris]
Length = 287
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 117/179 (65%), Gaps = 8/179 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
S +G KVV D+ TG SKGYGFV+F DE EQ R++TE G + ++P+R+ A K +
Sbjct: 121 PSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 178
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F + +V K++ +R TG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT Y ATY G Q +N P ++FVG L P V
Sbjct: 64 KING-----KPL---PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVD 108
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQFANR 320
D +L F + G++V + K GFV+F +
Sbjct: 109 DGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDE 147
>gi|8923460|ref|NP_060316.1| tRNA selenocysteine 1-associated protein 1 [Homo sapiens]
gi|149694993|ref|XP_001504030.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Equus
caballus]
gi|296207254|ref|XP_002750563.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Callithrix
jacchus]
gi|332245217|ref|XP_003271759.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 isoform 1
[Nomascus leucogenys]
gi|335290818|ref|XP_003356292.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Sus
scrofa]
gi|397515828|ref|XP_003828145.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Pan
paniscus]
gi|403308350|ref|XP_003944628.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Saimiri
boliviensis boliviensis]
gi|410966601|ref|XP_003989819.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Felis catus]
gi|426328634|ref|XP_004025356.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 isoform 1
[Gorilla gorilla gorilla]
gi|426328636|ref|XP_004025357.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 isoform 2
[Gorilla gorilla gorilla]
gi|74761781|sp|Q9NX07.1|TSAP1_HUMAN RecName: Full=tRNA selenocysteine 1-associated protein 1; AltName:
Full=SECp43; AltName: Full=tRNA
selenocysteine-associated protein 1
gi|7020651|dbj|BAA91217.1| unnamed protein product [Homo sapiens]
gi|12653787|gb|AAH00680.1| TRNA selenocysteine 1 associated protein 1 [Homo sapiens]
gi|119628094|gb|EAX07689.1| tRNA selenocysteine associated protein 1, isoform CRA_c [Homo
sapiens]
gi|261861114|dbj|BAI47079.1| tRNA selenocysteine 1 associated protein 1 [synthetic construct]
gi|410217052|gb|JAA05745.1| tRNA selenocysteine 1 associated protein 1 [Pan troglodytes]
gi|410246780|gb|JAA11357.1| tRNA selenocysteine 1 associated protein 1 [Pan troglodytes]
gi|410287892|gb|JAA22546.1| tRNA selenocysteine 1 associated protein 1 [Pan troglodytes]
gi|410350233|gb|JAA41720.1| tRNA selenocysteine 1 associated protein 1 [Pan troglodytes]
Length = 287
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 117/179 (65%), Gaps = 8/179 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
S +G KVV D+ TG SKGYGFV+F DE EQ R++TE G + ++P+R+ A K +
Sbjct: 121 PSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 178
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F + +V K++ +R TG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT Y ATY G Q +N P ++FVG L P V
Sbjct: 64 KING-----KPL---PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVD 108
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQFANR 320
D +L F + G++V + K GFV+F +
Sbjct: 109 DGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDE 147
>gi|354472393|ref|XP_003498424.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Cricetulus griseus]
Length = 287
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 117/179 (65%), Gaps = 8/179 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
S +G KVV D+ TG SKGYGFV+F DE EQ R++TE G + ++P+R+ A K +
Sbjct: 121 PSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 178
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F + +V K++ +R TG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT Y ATY G Q +N P ++FVG L P V
Sbjct: 64 KING-----KPL---PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVD 108
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQFANR 320
D +L F + G++V + K GFV+F +
Sbjct: 109 DGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDE 147
>gi|348571058|ref|XP_003471313.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Cavia
porcellus]
Length = 287
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 117/179 (65%), Gaps = 8/179 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
S +G KVV D+ TG SKGYGFV+F DE EQ R++TE G + ++P+R+ A K +
Sbjct: 121 PSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 178
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F + +V K++ +R TG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT Y ATY G Q +N P ++FVG L P V
Sbjct: 64 KING-----KPL---PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVD 108
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQFANR 320
D +L F + G++V + K GFV+F +
Sbjct: 109 DGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDE 147
>gi|12711700|ref|NP_075416.1| tRNA selenocysteine 1-associated protein 1 [Rattus norvegicus]
gi|81917757|sp|Q9QZI7.1|TSAP1_RAT RecName: Full=tRNA selenocysteine 1-associated protein 1; AltName:
Full=SECp43; AltName: Full=tRNA
selenocysteine-associated protein 1
gi|5853317|gb|AAD54419.1|AF181856_1 tRNA selenocysteine associated protein [Rattus norvegicus]
Length = 287
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 116/179 (64%), Gaps = 8/179 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
S +G KVV D+ TG SKGYGFV+F DE EQ R++TE G + +P+R+ A K +
Sbjct: 121 PSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPVRLSVAIPKAS 178
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F + +V K++ +R TG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT Y ATY G Q +N P ++FVG L P V
Sbjct: 64 KING-----KPL---PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVD 108
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQFANR 320
D +L F + G++V + K GFV+F +
Sbjct: 109 DGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDE 147
>gi|355726287|gb|AES08822.1| tRNA selenocysteine 1 associated protein 1 [Mustela putorius furo]
Length = 286
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 117/179 (65%), Gaps = 8/179 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
S +G KVV D+ TG SKGYGFV+F DE EQ R++TE G + ++P+R+ A K +
Sbjct: 121 PSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 178
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F + +V K++ +R TG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT Y ATY G Q +N P ++FVG L P V
Sbjct: 64 KING-----KPL---PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVD 108
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQFANR 320
D +L F + G++V + K GFV+F +
Sbjct: 109 DGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDE 147
>gi|395856824|ref|XP_003800818.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Otolemur
garnettii]
Length = 287
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 117/179 (65%), Gaps = 8/179 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
S +G KVV D+ TG SKGYGFV+F DE EQ R++TE G + ++P+R+ A K +
Sbjct: 121 PSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 178
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F + +V K++ +R TG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT Y ATY G Q +N P ++FVG L P V
Sbjct: 64 KING-----KPL---PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVD 108
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQFANR 320
D +L F + G++V + K GFV+F +
Sbjct: 109 DGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDE 147
>gi|409079460|gb|EKM79821.1| hypothetical protein AGABI1DRAFT_57019, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 366
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 128/237 (54%), Gaps = 32/237 (13%)
Query: 116 GYGFIEFVSHAAAERVLQTFNGT------QMPSTEQNFRLNWATYGAGERRQDDGPDFTI 169
GY F+ F + A A V N + MP++ + F L+WA Q +++I
Sbjct: 39 GYCFLTFSTPAQASTVFAQVNNSGKGGTMTMPNSSKPFVLSWAPAITPNNSQQYQKEYSI 98
Query: 170 FVGDLAADVTDYVLQETFRAV---------------YSSVKGAKVVTDRTTGRSKGYGFV 214
FVGDLA + ++ L FR + S K AK++ D TG S+GYGFV
Sbjct: 99 FVGDLAPETSNSDLVAVFRNPVLGLRNDREPKFIRPFLSCKSAKIMLDPLTGVSRGYGFV 158
Query: 215 RFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK-KAATG--QQYQKA--------TYQNT 263
RF DE++Q R++ EM+G+ C +RPMRI PA K K A+G Y +A N
Sbjct: 159 RFSDEADQQRALIEMHGLYCLSRPMRISPATAKFKPASGVSLDYSQAPPFSAPLPNVDNQ 218
Query: 264 QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
+ NDP NTT+FVGGL P ++++ L+T F +G++ +VK+P GK CGFVQF +
Sbjct: 219 PVTLTSNDPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCGFVQFVRK 275
>gi|402853636|ref|XP_003891498.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Papio
anubis]
gi|355764244|gb|EHH62272.1| hypothetical protein EGM_20511 [Macaca fascicularis]
gi|380785637|gb|AFE64694.1| tRNA selenocysteine 1-associated protein 1 [Macaca mulatta]
gi|383411005|gb|AFH28716.1| tRNA selenocysteine 1-associated protein 1 [Macaca mulatta]
gi|384939910|gb|AFI33560.1| tRNA selenocysteine 1-associated protein 1 [Macaca mulatta]
Length = 287
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 116/179 (64%), Gaps = 8/179 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
S +G KVV D+ TG SKGYGFV+F DE EQ R++TE G + +P+R+ A K +
Sbjct: 121 PSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGAKPVRLSVAIPKAS 178
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F + +V K++ +R TG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT Y ATY G Q +N P ++FVG L P V
Sbjct: 64 KING-----KPL---PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVD 108
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQFANR 320
D +L F + G++V + K GFV+F +
Sbjct: 109 DGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDE 147
>gi|62821783|ref|NP_082201.2| tRNA selenocysteine 1-associated protein 1 [Mus musculus]
gi|81912790|sp|Q80VC6.2|TSAP1_MOUSE RecName: Full=tRNA selenocysteine 1-associated protein 1; AltName:
Full=SECp43; AltName: Full=tRNA
selenocysteine-associated protein 1
gi|33416825|gb|AAH55454.1| TRNA selenocysteine 1 associated protein 1 [Mus musculus]
gi|66840156|gb|AAH48840.2| TRNA selenocysteine 1 associated protein 1 [Mus musculus]
gi|74225435|dbj|BAE31634.1| unnamed protein product [Mus musculus]
gi|148698163|gb|EDL30110.1| tRNA selenocysteine associated protein 1, isoform CRA_a [Mus
musculus]
Length = 287
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 115/179 (64%), Gaps = 8/179 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
S +G KVV D TG SKGYGFV+F DE EQ R++TE G + +P+R+ A K +
Sbjct: 121 PSCRGGKVVLD-PTGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPVRLSVAIPKAS 178
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 73/159 (45%), Gaps = 21/159 (13%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F + +V K++ +R TG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT Y ATY G Q +N P ++FVG L P V
Sbjct: 64 KING-----KPL---PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVD 108
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQFANR 320
D +L F + G++V K GFV+F +
Sbjct: 109 DGMLYEFFVKVYPSCRGGKVVLDPTGVSKGYGFVKFTDE 147
>gi|403214377|emb|CCK68878.1| hypothetical protein KNAG_0B04440 [Kazachstania naganishii CBS
8797]
Length = 397
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 155/294 (52%), Gaps = 41/294 (13%)
Query: 67 DASSDGIRSLWIGDLQPWMEESYIASIFGHTGE--------FVSGKVIRNKQTNFSEGYG 118
+ S+D L++GDL+P +E+ I I+ GE + + + N+ ++GY
Sbjct: 47 NMSNDAGVQLYMGDLEPSWDENVIKRIWSSIGEDNISVKMMWQNNNYMGNESGPRNQGYC 106
Query: 119 FIEFVSHAAAERVLQTFNGTQMPST-EQNFRLNWATYGA---GERRQDDGPDFTIFVGDL 174
FI+F +H A L N +P + +LNWA+ A G +F+IFVGDL
Sbjct: 107 FIDFPTHFNASNALLK-NKMSIPGHPHKKLKLNWASSSAPSTAGVSTTGGNNFSIFVGDL 165
Query: 175 AADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLC 234
A +VT+ L + F + Y S + AKVV D +TG SKGYGF+RF D ++Q ++ EM GV
Sbjct: 166 APNVTEAQLFDLFISRYPSTEHAKVVIDLSTGVSKGYGFIRFRDPADQQTALAEMQGVFL 225
Query: 235 STRPMRIGPAATKK---AATGQQYQKATYQNTQGSQGEN--------------------- 270
+ R +++G ++ + A +Q Y ++ + G++
Sbjct: 226 NGRALKVGMSSGQSNSGAGGSRQVGHDRYGGSKPAGGKSNTPNSALFSQFMYPIQQQPAL 285
Query: 271 ----DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DPNNTT+F+GGL P V ++ L+ F +GE+V+VKIP GK CGFVQ+ +R
Sbjct: 286 NHFTDPNNTTVFIGGLSPLVKEEELRQYFQPFGEIVYVKIPVGKGCGFVQYIDR 339
>gi|301755122|ref|XP_002913378.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like isoform
1 [Ailuropoda melanoleuca]
Length = 287
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/179 (45%), Positives = 116/179 (64%), Gaps = 8/179 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMPST--EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
S +G KVV D+ TG SKGYGFV+F DE EQ R+++E G + ++P+R+ A K +
Sbjct: 121 PSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALSECQGAVGLGSKPVRLSVAIPKAS 178
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F + +V K++ +R TG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT Y ATY G Q +N P ++FVG L P V
Sbjct: 64 KING-----KPL---PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVD 108
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQFANR 320
D +L F + G++V + K GFV+F +
Sbjct: 109 DGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDE 147
>gi|355557743|gb|EHH14523.1| hypothetical protein EGK_00465, partial [Macaca mulatta]
Length = 242
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 115/179 (64%), Gaps = 8/179 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMPST--EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
S +G KVV D+ TG SKGYGFV+F DE EQ R++TE G + +P+R+ A K +
Sbjct: 121 PSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGAKPVRLSVAIPKAS 178
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 21/158 (13%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F + +V K++ +R TG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT Y ATY G Q +N P ++FVG L P V
Sbjct: 64 KING-----KPL---PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVD 108
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQFAN 319
D +L F + G++V + K GFV+F +
Sbjct: 109 DGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTD 146
>gi|197101902|ref|NP_001127022.1| tRNA selenocysteine 1-associated protein 1 [Pongo abelii]
gi|75070420|sp|Q5R462.1|TSAP1_PONAB RecName: Full=tRNA selenocysteine 1-associated protein 1; AltName:
Full=tRNA selenocysteine-associated protein 1
gi|55733553|emb|CAH93454.1| hypothetical protein [Pongo abelii]
Length = 287
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/179 (45%), Positives = 116/179 (64%), Gaps = 8/179 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ TYG ++ D+ P++++FVGDL DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYVTYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
S +G KVV D+ TG SKGYGFV+F DE EQ R++TE G + ++P+R+ A K +
Sbjct: 121 PSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 178
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 21/159 (13%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F + +V K++ +R TG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT Y T G Q +N P ++FVG L P V
Sbjct: 64 KING-----KPL---PGATPAKRFKLNYV------TYGKQPDNSPE-YSLFVGDLTPDVD 108
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQFANR 320
D +L F + G++V + K GFV+F +
Sbjct: 109 DGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDE 147
>gi|387019429|gb|AFJ51832.1| tRNA selenocysteine 1-associated protein 1 [Crotalus adamanteus]
Length = 286
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 115/177 (64%), Gaps = 8/177 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F G+ V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGQLVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + F+LN+ATYG ++ D+ P++++FVGDL+ DV D ++ E F VY
Sbjct: 64 KINGKPLPGATPTKRFKLNYATYG---KQPDNSPEYSLFVGDLSPDVDDGMIYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
S +G KVV D+ TG SKGYGFV+F DE EQ R++ E G + ++P+R+ A K
Sbjct: 121 PSCRGGKVVVDQ-TGVSKGYGFVKFSDELEQKRALVECQGAVGLGSKPIRLSVAIPK 176
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F + V K++ +R TG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGQLVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT Y ATY G Q +N P ++FVG L P V
Sbjct: 64 KING-----KPL---PGATPTKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLSPDVD 108
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQFANR 320
D ++ F + G++V + K GFV+F++
Sbjct: 109 DGMIYEFFVKVYPSCRGGKVVVDQTGVSKGYGFVKFSDE 147
>gi|363755816|ref|XP_003648124.1| hypothetical protein Ecym_8010 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891324|gb|AET41307.1| Hypothetical protein Ecym_8010 [Eremothecium cymbalariae
DBVPG#7215]
Length = 602
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/283 (35%), Positives = 147/283 (51%), Gaps = 44/283 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGE-FVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
L++GDL E+ I I+ GE V K+I+N + GY F+EF S+ +A L
Sbjct: 55 LYMGDLDASWTENDIKQIWATLGEPNVQVKLIKNSGPMNNSGYCFVEFPSNLSATNALLK 114
Query: 135 FNGTQMP-STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
G +P ++ +LNWA++ G +F+IFVGDLA +V++ L E F + YSS
Sbjct: 115 -TGLPIPVDPSRSLKLNWASFATAP-----GTEFSIFVGDLAPNVSESQLFELFISRYSS 168
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA---- 249
AK+V D+ TG SKGYGFV+FG+E+EQ RS+ EM GV + R +R+ + K+
Sbjct: 169 TLNAKIVFDQVTGVSKGYGFVKFGNEAEQQRSLVEMQGVFLNGRAIRVSTTSKNKSRFRG 228
Query: 250 -ATGQQYQKATYQ------NTQGSQGENDP-------------------------NNTTI 277
+G A N G + P NNTT+
Sbjct: 229 GLSGTVTSAAAATAGPPVGNLSGVIQTSSPQTLPQQSQFIYPVQQQPVLSQFTDPNNTTV 288
Query: 278 FVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
F+GGL VT++ L+ F +G++V+VKIP GK CGFVQ+ +R
Sbjct: 289 FIGGLSSLVTEEELRAYFQPFGQIVYVKIPVGKGCGFVQYVDR 331
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 76/168 (45%), Gaps = 29/168 (17%)
Query: 163 DGPDFT---IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDE 219
+GP+ T +++GDL A T+ +++ + + K++ + + GY FV F
Sbjct: 46 NGPETTSTQLYMGDLDASWTENDIKQIWATLGEPNVQVKLIKNSGPMNNSGYCFVEFPS- 104
Query: 220 SEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFV 279
+++ N +L + P+ + P+ + K A++ G++ +IFV
Sbjct: 105 -----NLSATNALLKTGLPIPVDPSRSLK------LNWASFATAPGTE-------FSIFV 146
Query: 280 GGLDPSVTDDILKTVF-GQYGELVHVKIP------AGKRCGFVQFANR 320
G L P+V++ L +F +Y ++ KI K GFV+F N
Sbjct: 147 GDLAPNVSESQLFELFISRYSSTLNAKIVFDQVTGVSKGYGFVKFGNE 194
>gi|116283942|gb|AAH05795.1| Trnau1ap protein [Mus musculus]
Length = 221
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 114/179 (63%), Gaps = 8/179 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMPST--EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
S +G KVV D TG SKGYGFV+F DE EQ R++TE G + +P+R+ A K +
Sbjct: 121 PSCRGGKVVLD-PTGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPVRLSVAIPKAS 178
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 21/158 (13%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F + +V K++ +R TG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT Y ATY G Q +N P ++FVG L P V
Sbjct: 64 KING-----KPL---PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVD 108
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQFAN 319
D +L F + G++V K GFV+F +
Sbjct: 109 DGMLYEFFVKVYPSCRGGKVVLDPTGVSKGYGFVKFTD 146
>gi|348531393|ref|XP_003453194.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Oreochromis niloticus]
Length = 360
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/200 (42%), Positives = 124/200 (62%), Gaps = 16/200 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL P+M+E++I F GE G K+I ++ T S GY F+E A+ ER +Q
Sbjct: 7 SLWMGDLDPYMDENFIKQAFSAMGESPFGVKIITHRITGGSAGYCFVELADEASVERCVQ 66
Query: 134 TFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG +R + GP+F++FVGDLA+++ D+ L + F+ Y
Sbjct: 67 RLNGKLVPGSNPPRKFKLNYATYG---KRPEAGPEFSVFVGDLASEIDDFQLHQVFKK-Y 122
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK--- 248
S KGAKVVTD+ G S+GYGFV+FG+ESEQ +++ E G + +P+R+ A K
Sbjct: 123 PSCKGAKVVTDQY-GYSRGYGFVKFGEESEQKKAIEECQGTMLGGKPLRLSIAVAKSQKM 181
Query: 249 ----AATGQQYQKATYQNTQ 264
GQ YQ + Y TQ
Sbjct: 182 SSYHGGQGQNYQ-SNYNQTQ 200
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 24/158 (15%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + +++ F A+ S G K++T R TG S GY FV DE+ R +
Sbjct: 7 SLWMGDLDPYMDENFIKQAFSAMGESPFGVKIITHRITGGSAGYCFVELADEASVERCVQ 66
Query: 228 EMNGVLC--STRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
+NG L S P + + ATY G + E P ++FVG L
Sbjct: 67 RLNGKLVPGSNPPRKF------------KLNYATY----GKRPEAGP-EFSVFVGDLASE 109
Query: 286 VTDDILKTVFGQYGELVHVKIPA-----GKRCGFVQFA 318
+ D L VF +Y K+ + GFV+F
Sbjct: 110 IDDFQLHQVFKKYPSCKGAKVVTDQYGYSRGYGFVKFG 147
>gi|432916416|ref|XP_004079326.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Oryzias
latipes]
Length = 345
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 121/192 (63%), Gaps = 15/192 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL P+M+E++I F GE G K+I ++ T S GY F+E + +R +Q
Sbjct: 8 SLWMGDLDPYMDENFIKQAFSAMGESPCGVKIITHRITGGSAGYCFVELADEESVDRCVQ 67
Query: 134 TFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P++ + F+LN+ATYG +R + GP+F++FVGDLA+++ D+ L + F+ Y
Sbjct: 68 RLNGKLVPASNPPRKFKLNYATYG---KRPEAGPEFSVFVGDLASEIDDFQLHQVFKK-Y 123
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK---- 247
S KGAKVVTD+ G S+GYGFV+FG+ESEQ +++ E G + +P+R+ A K
Sbjct: 124 PSCKGAKVVTDQY-GYSRGYGFVKFGEESEQKKAIEECQGTVLGGKPLRLSIAVAKSQKV 182
Query: 248 ---KAATGQQYQ 256
+A GQ Y
Sbjct: 183 SNYQAGQGQSYH 194
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 20/155 (12%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + +++ F A+ S G K++T R TG S GY FV DE R +
Sbjct: 8 SLWMGDLDPYMDENFIKQAFSAMGESPCGVKIITHRITGGSAGYCFVELADEESVDRCVQ 67
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG ++ PA+ Y ATY G + E P ++FVG L +
Sbjct: 68 RLNG--------KLVPASNPPRKFKLNY--ATY----GKRPEAGP-EFSVFVGDLASEID 112
Query: 288 DDILKTVFGQYGELVHVKIPA-----GKRCGFVQF 317
D L VF +Y K+ + GFV+F
Sbjct: 113 DFQLHQVFKKYPSCKGAKVVTDQYGYSRGYGFVKF 147
>gi|410081644|ref|XP_003958401.1| hypothetical protein KAFR_0G02320 [Kazachstania africana CBS 2517]
gi|372464989|emb|CCF59266.1| hypothetical protein KAFR_0G02320 [Kazachstania africana CBS 2517]
Length = 620
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 154/331 (46%), Gaps = 84/331 (25%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQ---------TNFS---------- 114
R+LW+GDL P +E I I+ G+ VS K++R K+ TN S
Sbjct: 37 RTLWMGDLDPTFDELTIKEIWKRLGKNVSIKLVRAKKNLLIPCSSFTNNSGGNSKNETEE 96
Query: 115 --------------------EGYGFIEFVSHAAAE-------RVLQTFNG--TQM---PS 142
GY FIEF S A+ + + F T++ PS
Sbjct: 97 SSITINGISFIDPMTTQLHHAGYCFIEFDSLKDAQFGLSLNSKPIPNFKSISTELETNPS 156
Query: 143 TEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTD 202
++ FRLNWA+ + P++++FVGDL+ T+ L + F+ + SVK +V+TD
Sbjct: 157 GQRTFRLNWASGATLQSSIPTTPEYSLFVGDLSPMTTEADLLKLFQKTFKSVKTVRVMTD 216
Query: 203 RTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ-------- 254
TG S+ +GF+R DE E+ ++ +MNG L R +R+ A + A +Q
Sbjct: 217 PITGESRCFGFIRLSDEFEREEALDKMNGTLLHGRQLRVALANPRNANLQEQAPSQVVED 276
Query: 255 ----------------YQKATYQNTQGS---------QGENDPNNTTIFVGGLDPSVTDD 289
+ K +N+ + +NDP NTT+FVG L+ +T+D
Sbjct: 277 KKKHNEPLLLETAKKLFSKELLKNSSSNVNDVKSNEDHSDNDPTNTTVFVGNLNCKITED 336
Query: 290 ILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
L+ VF +G + VKIP GK+CGFV+F N+
Sbjct: 337 ELQKVFEPFGAIEKVKIPPGKKCGFVKFCNK 367
>gi|126328777|ref|XP_001365071.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Monodelphis domestica]
Length = 287
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 115/177 (64%), Gaps = 8/177 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG ++ D+ P++++FV DL+ DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVRDLSPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
S +G KVV D+ G SKGYGFV+F DE EQ R++TE G + ++P+R+ A K
Sbjct: 121 PSCRGGKVVLDQ-AGISKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPK 176
>gi|395521932|ref|XP_003765068.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Sarcophilus
harrisii]
Length = 287
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 115/177 (64%), Gaps = 8/177 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG ++ D+ P++++FV DL+ DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVRDLSPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
S +G KVV D+ G SKGYGFV+F DE EQ R++TE G + ++P+R+ A K
Sbjct: 121 PSCRGGKVVLDQ-AGISKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPK 176
>gi|294659018|ref|XP_461354.2| DEHA2F23276p [Debaryomyces hansenii CBS767]
gi|202953554|emb|CAG89760.2| DEHA2F23276p [Debaryomyces hansenii CBS767]
Length = 477
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 165/326 (50%), Gaps = 33/326 (10%)
Query: 19 QHQQWMAYQQQSQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWI 78
+ ++ + Q QSQ QQ++ P Q PP Q + S++ LW+
Sbjct: 43 NYNKYNSNQYQSQVQQRK-----PYNRSNNYQANYPPRNNYQNSYDQGNHSAENQNQLWM 97
Query: 79 GDLQPWMEESYIASIFGHTGEF-VSGKVIRNK------QTNFSEGYGFIEFVSHAAAERV 131
GDL P +E+ I I+ GE V+ K+IR+K + + GY F+ F + A
Sbjct: 98 GDLDPSWDENAIKKIWSAFGETPVAVKIIRDKFAVDSTDSKSNAGYCFVSFANQKAVSTA 157
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDG--------PDFTIFVGDLAADVTDYVL 183
+ NG Q+P + + F+LNWA+ Q++ D++IFVGDL +DVT+ +L
Sbjct: 158 VLK-NGLQIPGSTKVFKLNWASGSGSTIPQENNFKPIGKTHNDYSIFVGDLGSDVTEPML 216
Query: 184 QETFRAVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
E F VY + VK AK++ D T SKG+GFVRF Q +++ EMNG + +RP+R+G
Sbjct: 217 FECFNKVYPNQVKQAKIMFDPVTKLSKGFGFVRFSTSFTQQKALNEMNGTIAGSRPIRVG 276
Query: 243 PAA-TKKAATGQ----QYQKATYQNTQGSQ------GENDPNNTTIFVGGLDPSVTDDIL 291
AA + A GQ + + N +Q DPNNTTI + GL ++D L
Sbjct: 277 MAAGSSNNAVGQDTFSKSETPVASNVHIAQPQPSLNAHTDPNNTTIIIKGLSSKFSEDEL 336
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQF 317
+ F +G++V+ K+ + G +++
Sbjct: 337 CSYFIAFGDIVYCKLSSDFNSGIIKY 362
>gi|198421765|ref|XP_002125303.1| PREDICTED: similar to tRNA selenocysteine-associated protein 1
(SECp43) [Ciona intestinalis]
Length = 324
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 111/177 (62%), Gaps = 7/177 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
RSLW+GDL+P+M+E+++ F + VS KVIR K GY FIEF S A AERVL+
Sbjct: 3 RSLWMGDLEPYMDETFVNKAFLQVSQPVSVKVIRRKDNGLPAGYCFIEFPSEAEAERVLK 62
Query: 134 TFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NGT + + + FRLN + G + D GP F+IFVGDL A VTD L++ F Y
Sbjct: 63 LVNGTTINGSNPPKRFRLNRSQAG---KMWDIGPSFSIFVGDLDATVTDDKLEDFFLKRY 119
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
SVKGAK++ + G S+GYGFVRF DE+EQ R++ EM G+ +P+R+ A K
Sbjct: 120 RSVKGAKIMYEE-GGISRGYGFVRFSDEAEQKRALQEMQGIRGLGAKPIRVSVATPK 175
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 26/160 (16%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + + F V V KV+ + G GY F+ F E+E R +
Sbjct: 4 SLWMGDLEPYMDETFVNKAFLQVSQPV-SVKVIRRKDNGLPAGYCFIEFPSEAEAERVLK 62
Query: 228 EMNGVLC--STRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
+NG S P R ++ G+ + + +IFVG LD +
Sbjct: 63 LVNGTTINGSNPPKRF---RLNRSQAGKMWDIGP--------------SFSIFVGDLDAT 105
Query: 286 VTDDILKTVF-GQYGELVHVKIP-----AGKRCGFVQFAN 319
VTDD L+ F +Y + KI + GFV+F++
Sbjct: 106 VTDDKLEDFFLKRYRSVKGAKIMYEEGGISRGYGFVRFSD 145
>gi|260829407|ref|XP_002609653.1| hypothetical protein BRAFLDRAFT_123569 [Branchiostoma floridae]
gi|229295015|gb|EEN65663.1| hypothetical protein BRAFLDRAFT_123569 [Branchiostoma floridae]
Length = 297
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 113/180 (62%), Gaps = 8/180 (4%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGE-FVSGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
+ SLW+GDL+P+M+E +I + F GE +S K+I+N+QT G+ F++F AER
Sbjct: 1 MTSLWMGDLEPYMDEPFIMNAFASMGEPIISVKLIKNRQTGGPAGFCFVDFGDQQLAERA 60
Query: 132 LQTFNGTQMPS--TEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
L +G Q+P T + F+LN+A+YG R P+++IFVGDL ++ D LQE F
Sbjct: 61 LTRLSGKQLPGSYTPKRFKLNYASYG---RENVVTPEYSIFVGDLTPEIDDGSLQEFFGR 117
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKK 248
YSS K AKVV D G S+GYGFVRF DE+EQ R++TEM G + + +R+ PA +
Sbjct: 118 RYSSCKAAKVVLD-AAGNSRGYGFVRFTDENEQKRALTEMQGAVGLGGKALRVSPATPRN 176
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 25/160 (15%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F ++ + K++ +R TG G+ FV FGD+ R++T
Sbjct: 3 SLWMGDLEPYMDEPFIMNAFASMGEPIISVKLIKNRQTGGPAGFCFVDFGDQQLAERALT 62
Query: 228 EMNG--VLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
++G + S P R + A+Y G + P +IFVG L P
Sbjct: 63 RLSGKQLPGSYTPKRF------------KLNYASY----GRENVVTPE-YSIFVGDLTPE 105
Query: 286 VTDDILKTVFG-QYGELVHVKI---PAG--KRCGFVQFAN 319
+ D L+ FG +Y K+ AG + GFV+F +
Sbjct: 106 IDDGSLQEFFGRRYSSCKAAKVVLDAAGNSRGYGFVRFTD 145
>gi|318037555|ref|NP_001188239.1| tRNA selenocysteine 1-associated protein 1-like [Ictalurus
punctatus]
gi|308324633|gb|ADO29451.1| tRNA selenocysteine 1-associated protein 1-like [Ictalurus
punctatus]
Length = 315
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 111/179 (62%), Gaps = 8/179 (4%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERV 131
+ SLW+GDL P+M+E++I F GE G K+I ++ T S GY F+E A+ +R
Sbjct: 5 MTSLWMGDLDPYMDENFIKQAFSTMGETAYGVKIITHRVTGGSAGYCFVELADEASVDRC 64
Query: 132 LQTFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
+Q NG +P + + F+LN+ATYG +R + GP+F++FVGDL +V DY L + F
Sbjct: 65 VQRLNGKLVPGSNPPRKFKLNYATYG---KRPEPGPEFSVFVGDLTPEVDDYQLHQFFLK 121
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM-NGVLCSTRPMRIGPAATK 247
Y S KGAKVVTD G SKGYGFV+FGDESEQ +++ E N + +RI A K
Sbjct: 122 KYPSCKGAKVVTD-PYGNSKGYGFVKFGDESEQKKALEEFQNATGLGGKAIRISIAVNK 179
>gi|403359035|gb|EJY79175.1| Nuclear acid binding protein, putative [Oxytricha trifallax]
Length = 474
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 111/210 (52%), Gaps = 32/210 (15%)
Query: 67 DASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHA 126
+A G ++LWIGD++PWM+++YI+S+F + K+IR+K GYGF+EF +H
Sbjct: 9 EAGQVGAKTLWIGDVEPWMDDAYISSLFSGIASVQTVKLIRDKLKGTPVGYGFVEFPNHD 68
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQ---------------DDGP------ 165
A V T NG+ +P T ++++LNWAT+G G +Q + P
Sbjct: 69 VARNVYLTLNGSVIPGTTKSYKLNWATHGNGGIKQIQNQPQSQPPHLQMHNQNPQMMNQG 128
Query: 166 -----------DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFV 214
DF I+VGDL +V D +L F Y SV AKV+ D T SKGYGFV
Sbjct: 129 GPGGAQQQQQGDFQIYVGDLDPNVNDQMLLNVFNKKYPSVTQAKVIVDPVTRYSKGYGFV 188
Query: 215 RFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
+FG + E +M EM G +PM+I A
Sbjct: 189 KFGSQEESQNAMVEMQGYYLFKKPMKINQA 218
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 75/178 (42%), Gaps = 26/178 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++GD+ + D + F + +SV+ K++ D+ G GYGFV F +
Sbjct: 17 TLWIGDVEPWMDDAYISSLFSGI-ASVQTVKLIRDKLKGTPVGYGFVEFPNHDVARNVYL 75
Query: 228 EMNGVLC--STRPMRI-----GPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTT--- 276
+NG + +T+ ++ G K+ Q Q Q + Q Q N
Sbjct: 76 TLNGSVIPGTTKSYKLNWATHGNGGIKQIQNQPQSQPPHLQMHNQNPQMMNQGGPGGAQQ 135
Query: 277 -------IFVGGLDPSVTDDILKTVFG-QYGELVHVKIPA------GKRCGFVQFANR 320
I+VG LDP+V D +L VF +Y + K+ K GFV+F ++
Sbjct: 136 QQQGDFQIYVGDLDPNVNDQMLLNVFNKKYPSVTQAKVIVDPVTRYSKGYGFVKFGSQ 193
>gi|366996152|ref|XP_003677839.1| hypothetical protein NCAS_0H01810 [Naumovozyma castellii CBS 4309]
gi|342303709|emb|CCC71491.1| hypothetical protein NCAS_0H01810 [Naumovozyma castellii CBS 4309]
Length = 443
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 144/289 (49%), Gaps = 45/289 (15%)
Query: 72 GIRSLWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
G L++GDL P +E+ I I+ GE V K++ N ++GY F+EF S
Sbjct: 45 GSSQLYMGDLDPNWDENVIRQIWRDLGESNVHVKMMWNSNLGVNQGYCFVEFPSMEHGNN 104
Query: 131 VLQTFNGTQMPSTEQN-FRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
L NG +P Q +LNWA+ GA + F++FVGDL+ +VT+ L E F
Sbjct: 105 ALLK-NGIVIPGFPQRRLKLNWASAGA----NGNNSGFSVFVGDLSPNVTEAQLFELFIG 159
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG------- 242
Y S AKVV D+ TG SK YGFV+F ++Q R + EM GV + R +++G
Sbjct: 160 RYPSTCHAKVVHDQLTGVSKCYGFVKFNSATDQQRVLVEMQGVFLNGRSIKVGLTGGAHN 219
Query: 243 -PAATKKAATGQQY------QKATYQNTQGSQGEN------------------------D 271
+ T A G+ A+ ++ S N D
Sbjct: 220 DNSNTNSMAGGRSRFGGMPPNSASTVSSGNSNNRNMTPLLNSSQFMYPVQQQPTLNHLTD 279
Query: 272 PNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
PNNTT+F+GGL V++D L+ F +G++++VKIP GK CGFVQ+ +R
Sbjct: 280 PNNTTVFIGGLSSLVSEDDLRQYFQPFGDIIYVKIPTGKGCGFVQYVDR 328
>gi|326932968|ref|XP_003212582.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Meleagris gallopavo]
Length = 307
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 109/171 (63%), Gaps = 8/171 (4%)
Query: 81 LQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQ 139
L+P+M+E++++ F GE V S K+IRN+ T GY F+EF A AE+ L NG
Sbjct: 30 LEPYMDENFVSRAFATMGELVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKP 89
Query: 140 MPST--EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGA 197
+P + F+LN+ATYG ++ D+ P++++FVGDL ADV D +L E F VY S +G
Sbjct: 90 LPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTADVDDGMLYEFFVKVYPSCRGG 146
Query: 198 KVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
KVV D+ G SKGYGFV+F DE EQ R++TE G + ++PMR+ A K
Sbjct: 147 KVVLDQ-AGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPMRLSVAIPK 196
>gi|426192598|gb|EKV42534.1| hypothetical protein AGABI2DRAFT_229063, partial [Agaricus bisporus
var. bisporus H97]
Length = 396
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 130/267 (48%), Gaps = 62/267 (23%)
Query: 116 GYGFIEFVSHAAAERVLQTFNGT------QMPSTEQNFRLNWA-TYGAGERRQDDGPDFT 168
GY F+ F + A A VL N + MP++ + F L+WA +++
Sbjct: 39 GYCFLTFSTPAQASTVLAQVNNSGKGGTMTMPNSSKPFVLSWAPAVTPSISTPQYQKEYS 98
Query: 169 IFVGDLAADVTDYVLQETFRAV---------------YSSVKGAKVVTDRTTGRSKGYGF 213
IFVGDLA + ++ L FR + S K AK++ D TG S+GYGF
Sbjct: 99 IFVGDLAPETSNSDLVAVFRNPVLGLRNDREPKFIRPFLSCKSAKIMLDPLTGVSRGYGF 158
Query: 214 VRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK-KAATG-------------------- 252
VRF DE++Q R++ EM+G+ C +RPMRI PA K K A+G
Sbjct: 159 VRFSDEADQQRALIEMHGLYCLSRPMRISPATAKFKPASGVGNGLGVSGLLSEAQLRQVF 218
Query: 253 ---------------QQYQKATYQNTQGSQGE----NDPNNTTIFVGGLDPSVTDDILKT 293
+ +A N G GE NDP NTT+FVGGL P ++++ L+T
Sbjct: 219 GQTDGYLMTEESLKHHAHARAILGNLMGPNGEQLTSNDPYNTTVFVGGLSPLISEETLRT 278
Query: 294 VFGQYGELVHVKIPAGKRCGFVQFANR 320
F +G++ +VK+P GK CGFVQF +
Sbjct: 279 FFAPFGDIHYVKVPVGKHCGFVQFVRK 305
>gi|224081280|ref|XP_002188811.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Taeniopygia
guttata]
Length = 281
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 112/174 (64%), Gaps = 8/174 (4%)
Query: 78 IGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFN 136
+G+L+P+M+E++++ F GE V S K+IRN+ T GY F+EF A AE+ L N
Sbjct: 1 MGELEPYMDENFVSRAFATMGELVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKIN 60
Query: 137 GTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
G +P + + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY S
Sbjct: 61 GKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSC 117
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
+G KVV D+ G SKGYGFV+F DE EQ R++TE G + ++P+R+ A K
Sbjct: 118 RGGKVVLDQ-AGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPK 170
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 21/156 (13%)
Query: 171 VGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMN 230
+G+L + + + F + V K++ +R TG GY FV F D + + + ++N
Sbjct: 1 MGELEPYMDENFVSRAFATMGELVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKIN 60
Query: 231 GVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDI 290
G +P+ P AT Y ATY G Q +N P ++FVG L P V D +
Sbjct: 61 G-----KPL---PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVDDGM 105
Query: 291 LKTVFGQY------GELVHVKIPAGKRCGFVQFANR 320
L F + G++V + K GFV+F +
Sbjct: 106 LYEFFVKVYPSCRGGKVVLDQAGVSKGYGFVKFTDE 141
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 62 YGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIE 121
YG PD S + SL++GDL P +++ + F G + Q S+GYGF++
Sbjct: 80 YGKQPDNSPE--YSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQAGVSKGYGFVK 137
Query: 122 FVSHAAAERVLQTFNG 137
F +R L G
Sbjct: 138 FTDELEQKRALTECQG 153
>gi|229594706|ref|XP_001022345.3| RNA binding protein [Tetrahymena thermophila]
gi|225566688|gb|EAS02100.3| RNA binding protein [Tetrahymena thermophila SB210]
Length = 482
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 115/205 (56%), Gaps = 26/205 (12%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S+ +R+LW+GD++ WM E +I S+F G+ VS K+IR K+T+ GY F+EF +H A
Sbjct: 2 SNLDLRTLWVGDIENWMTEQFIESVFNKVGKVVSVKLIRTKETSLPAGYCFVEFQTHEQA 61
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWAT------------------YGAGERRQDDGP----- 165
ER+L +N +P T+ FR+NW YG + P
Sbjct: 62 ERILMNYNQQLIPGTQNTFRMNWGKNPTNTGIIKQPTTQANNGYGNNQYGMMQQPVIQMP 121
Query: 166 ---DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
+F+I+VG+L + + L E FR+ YSSV G+K++T+ T+ SKGYGFV+F + E
Sbjct: 122 PIQEFSIYVGELELGINEQQLAEHFRSKYSSVIGSKIITEPTSKMSKGYGFVKFSNPIEG 181
Query: 223 LRSMTEMNGVLCSTRPMRIGPAATK 247
R++ EMNG L + +++ A ++
Sbjct: 182 QRAIHEMNGSLFKGKFIKVSQAVSR 206
>gi|302656875|ref|XP_003020176.1| hypothetical protein TRV_05751 [Trichophyton verrucosum HKI 0517]
gi|291183977|gb|EFE39558.1| hypothetical protein TRV_05751 [Trichophyton verrucosum HKI 0517]
Length = 281
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 105/194 (54%), Gaps = 33/194 (17%)
Query: 160 RQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDE 219
R++ GP+F+IFVGDL +V +YVL F++ + S K AK++TD TG S+GYGFVRF DE
Sbjct: 21 REERGPEFSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPITGLSRGYGFVRFSDE 80
Query: 220 SEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGE---------- 269
++Q R+++EM GV C RPMRI A K A G G
Sbjct: 81 TDQQRALSEMQGVYCGNRPMRISTATPKNKGPAGPGGPAHMGVPGGPPGGMYPPSMGGAG 140
Query: 270 -----------------------NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
DPNNTT+FVGGL VT+D L++ F +GE+ +VKI
Sbjct: 141 GPPGPGGPQMGYYGAAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKI 200
Query: 307 PAGKRCGFVQFANR 320
P GK CGFVQF R
Sbjct: 201 PPGKGCGFVQFVQR 214
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 75 SLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL P + E + S+F S K++ + T S GYGF+ F +R L
Sbjct: 29 SIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPITGLSRGYGFVRFSDETDQQRALS 88
Query: 134 TFNGT 138
G
Sbjct: 89 EMQGV 93
>gi|151944033|gb|EDN62326.1| RNA-binding protein [Saccharomyces cerevisiae YJM789]
Length = 523
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 151/304 (49%), Gaps = 60/304 (19%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNF----------SEGYGFIEFVS 124
L++GDL P +++ + I+ GE ++ +++ N N ++GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115
Query: 125 HAAAERVLQTFNGTQMPST-EQNFRLNWATYGAGERRQ-----DDGPDFTIFVGDLAADV 178
A L NG +P+ + +LNWAT G + +IFVGDLAA+V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAANV 174
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T+ L E F Y+S AK+V D+ TG SKGYGFV+F + EQ +++EM GV + R
Sbjct: 175 TESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 239 MRIGPAATKK--AATGQQYQKATYQ-NTQG-------------SQGEN------------ 270
+++GP + ++ + Y +++ N + S G N
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMGFKRNHMSQF 294
Query: 271 --------------DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQ 316
DPNNTT+F+GGL VT+D L+ F +G +V+VKIP GK CGFVQ
Sbjct: 295 IYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQ 354
Query: 317 FANR 320
+ +R
Sbjct: 355 YVDR 358
>gi|401625439|gb|EJS43448.1| nam8p [Saccharomyces arboricola H-6]
Length = 527
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 148/308 (48%), Gaps = 64/308 (20%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNF----------SEGYGFIEFVS 124
L++GDL P ++S I I+ GE ++ +++ N +N ++GY F++F S
Sbjct: 56 LYMGDLDPTWDKSTIRQIWASLGEANINVRMMWNNPSNNGPRSPLGQKNNQGYCFVDFPS 115
Query: 125 HAAAERVLQTFNGTQMPST-EQNFRLNWATYGAGERRQ---------DDGPDFTIFVGDL 174
A L NG +P+ + +LNWAT G +++IFVGDL
Sbjct: 116 STHAANALLK-NGMLIPNFPNRKLKLNWATSSYSNNSNTSNTVNNTAKSGNNYSIFVGDL 174
Query: 175 AADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLC 234
A +VT+ L E F Y+S AK+V D+ TG SKGYGFV+F + EQ +++EM GV
Sbjct: 175 APNVTESQLFELFINRYASASHAKIVHDQVTGMSKGYGFVKFNNADEQHLALSEMQGVFL 234
Query: 235 STRPMRIGPAA------------------------------TKKAATGQQYQKATYQNTQ 264
+ R +++GP A ++ G K + +
Sbjct: 235 NGRAIKVGPTAGQQQQNMHANGNSRSFSSLNNENMDPRFSSKNQSLLGNVANKMSLKRNY 294
Query: 265 GSQ------------GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
SQ DPNNTT+F+GGL VT+D L+ F +G +V+VKIP GK C
Sbjct: 295 TSQFIYPVQQQPSLTHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGC 354
Query: 313 GFVQFANR 320
GFVQ+ +R
Sbjct: 355 GFVQYVDR 362
>gi|50288915|ref|XP_446887.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526196|emb|CAG59820.1| unnamed protein product [Candida glabrata]
Length = 555
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/288 (34%), Positives = 142/288 (49%), Gaps = 44/288 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSE---GYGFIEFVSHAAAERV 131
L++GDL P +E+ + I+ GE G +++ +F GY F+EF S A A
Sbjct: 86 LYMGDLDPSWDEAVVKGIWAALGEENIGVRMMWGGDADFHRKNLGYCFVEFPSPAHASNA 145
Query: 132 LQTFNGTQMPS-TEQNFRLNWA----TYGAGERRQDDG-----PDFTIFVGDLAADVTDY 181
L NG ++P + +LNW+ G+G + + +IFVGDLA VT+
Sbjct: 146 LMK-NGMEIPGFVHKKLKLNWSAQSVNNGSGASVANGAVANQQTNNSIFVGDLAPSVTEA 204
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
L + F Y S AKV+ D+ TG SKGYGFV+F +Q R++ EM G + R ++I
Sbjct: 205 QLFDLFINKYPSTVHAKVMYDQLTGISKGYGFVKFKSSMDQQRALVEMQGCFLNGRAIKI 264
Query: 242 GPAA------TKKAATGQQYQKATYQNTQGSQGEN-----------------------DP 272
G A + Q+ N G Q + DP
Sbjct: 265 GIAGGNNNNNSNSNYNNQRMANDNISNGLGQQSRSLNGQLPQQFVNATPQQPVLNHFTDP 324
Query: 273 NNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
NNTT+FVGGL P VT+D L++ F +G +++VKIPAGK CGFVQ+ R
Sbjct: 325 NNTTVFVGGLSPLVTEDELRSYFEPFGTIIYVKIPAGKGCGFVQYVER 372
>gi|365760349|gb|EHN02076.1| Nam8p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 513
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 147/306 (48%), Gaps = 62/306 (20%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNF----------SEGYGFIEFVS 124
L++GDL P +++ I I+ GE V+ +++ N +N ++GY FI+F S
Sbjct: 46 LYMGDLDPTWDKNTIRQIWTSLGEANVNVRMMWNNPSNNGSRPSVGPKNNQGYCFIDFPS 105
Query: 125 HAAAERVLQTFNGTQMPS-TEQNFRLNWATYGAGER----RQDDGPDFTIFVGDLAADVT 179
A L NG +P+ + +LNWAT G ++IFVGDLA +VT
Sbjct: 106 STHAANALLK-NGMLIPNFPNRKLKLNWATSSYSNNINGANMKSGNSYSIFVGDLAPNVT 164
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
+ L F Y+S AK+V D+ TG SKGYGFV+F + E+ +++EM GV + R +
Sbjct: 165 ESQLFGLFINRYASASHAKIVHDQVTGMSKGYGFVKFTNAGEEQLALSEMQGVFLNGRAI 224
Query: 240 RIGPAATK---------------------------KAATGQQYQKATYQNTQGSQGEN-- 270
++GP + + + + Q N S+G N
Sbjct: 225 KVGPTSGQQQQNVHVNGNIDQGRSSSSLNNENFDPRFHSKNQSLLGNVANNMSSKGNNVS 284
Query: 271 ----------------DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGF 314
DPNNTT+F+GGL VT+D L+ F +G +V+VKIP GK CGF
Sbjct: 285 QFIYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGF 344
Query: 315 VQFANR 320
VQ+ +R
Sbjct: 345 VQYVDR 350
>gi|190344618|gb|EDK36327.2| hypothetical protein PGUG_00425 [Meyerozyma guilliermondii ATCC
6260]
Length = 450
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 145/262 (55%), Gaps = 19/262 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+W+GDL P E IA I+ GE VS K++++ + GY F+ F + A + L T
Sbjct: 85 VWMGDLDPRWNEQAIADIWSQIGESPVSIKIMKDGREP-GGGYCFVSFANANAVQTAL-T 142
Query: 135 FNGTQMPSTEQNFRLNWATYGAG-----ERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
+NG+ +P++ ++F+LN A+ G +R DF+IFVGDLA DV++ +L E F +
Sbjct: 143 YNGSPIPNSSKHFKLNIASRGKNTATDIQRNSKPANDFSIFVGDLAMDVSEPILYEAFNS 202
Query: 190 VY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA--- 245
++ VK K++ D +T SKG+GFVRF D + Q +++TE NG++ +R +R+G AA
Sbjct: 203 LFPDQVKQVKIMMDNSTRASKGFGFVRFFDANTQAKALTEANGMVVGSRAIRVGMAAGSN 262
Query: 246 -----TKKAATGQQYQKATYQNTQGSQGE--NDPNNTTIFVGGLDPSVTDDILKTVFGQY 298
T + + A + + + +DP N TI V GL VT++ L +
Sbjct: 263 KPQPVTNIVHSDRLASPAIEEEVKLPKHARFSDPTNNTIVVHGLSGKVTEEELALHLSSF 322
Query: 299 GELVHVKIPAGKRCGFVQFANR 320
GE+++ + + G+V+F NR
Sbjct: 323 GEILYCTLSSDFDSGYVKFYNR 344
>gi|123904573|sp|Q4KM14.1|TSP1L_DANRE RecName: Full=tRNA selenocysteine 1-associated protein 1-like;
AltName: Full=tRNA selenocysteine 1-associated protein
1; AltName: Full=tRNA selenocysteine-associated protein
1
gi|68534021|gb|AAH98884.1| TRNA selenocysteine 1 associated protein 1 [Danio rerio]
Length = 316
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 116/185 (62%), Gaps = 10/185 (5%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERV 131
+ SLW+GDL P+M+E++I F GE G K+I ++ T S GY F+E A+ +R
Sbjct: 5 MTSLWMGDLDPYMDENFIKQAFSTMGETAFGVKIITHRVTGGSAGYCFVEMADEASVDRC 64
Query: 132 LQTFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
+Q NG +P + + F+LN+ATYG +R + GP+F++FVGDL ++V DY L + F
Sbjct: 65 VQRLNGKLVPGSNPPRKFKLNYATYG---KRPEPGPEFSVFVGDLTSEVDDYQLHQFFLK 121
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM-NGVLCSTRPMRIGPAATK- 247
+ S KGAKVVTD G S+GYGFV+F DE+EQ +++ E N +P+RI A K
Sbjct: 122 KFPSCKGAKVVTD-PYGNSRGYGFVKFSDENEQKKALEEFQNASGLGGKPIRISIAVNKG 180
Query: 248 -KAAT 251
KA+T
Sbjct: 181 NKAST 185
>gi|157384980|ref|NP_001025137.2| tRNA selenocysteine 1-associated protein 1-like [Danio rerio]
Length = 316
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 116/185 (62%), Gaps = 10/185 (5%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERV 131
+ SLW+GDL P+M+E++I F GE G K+I ++ T S GY F+E A+ +R
Sbjct: 5 MTSLWMGDLDPYMDENFIKQAFSTMGETAFGVKIITHRVTGGSAGYCFVEMADEASVDRC 64
Query: 132 LQTFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
+Q NG +P + + F+LN+ATYG +R + GP+F++FVGDL ++V DY L + F
Sbjct: 65 VQRLNGKLVPGSNPPRKFKLNYATYG---KRPEPGPEFSVFVGDLTSEVDDYQLHQFFLK 121
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM-NGVLCSTRPMRIGPAATK- 247
+ S KGAKVVTD G S+GYGFV+F DE+EQ +++ E N +P+RI A K
Sbjct: 122 KFPSCKGAKVVTD-PYGNSRGYGFVKFSDENEQKKALEEFQNASGLGGKPIRISIAVNKG 180
Query: 248 -KAAT 251
KA+T
Sbjct: 181 NKAST 185
>gi|146422214|ref|XP_001487048.1| hypothetical protein PGUG_00425 [Meyerozyma guilliermondii ATCC
6260]
Length = 450
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 145/262 (55%), Gaps = 19/262 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+W+GDL P E IA I+ GE VS K++++ + GY F+ F + A + L T
Sbjct: 85 VWMGDLDPRWNEQAIADIWSQIGESPVSIKIMKDGREP-GGGYCFVSFANANAVQTAL-T 142
Query: 135 FNGTQMPSTEQNFRLNWATYGAG-----ERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
+NG+ +P++ ++F+LN A+ G +R DF+IFVGDLA DV++ +L E F +
Sbjct: 143 YNGSPIPNSSKHFKLNIASRGKNTATDIQRNSKPANDFSIFVGDLAMDVSEPILYEAFNS 202
Query: 190 VY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA--- 245
++ VK K++ D +T SKG+GFVRF D + Q +++TE NG++ +R +R+G AA
Sbjct: 203 LFPDQVKQVKIMMDNSTRASKGFGFVRFFDANTQAKALTEANGMVVGSRAIRVGMAAGSN 262
Query: 246 -----TKKAATGQQYQKATYQNTQGSQGE--NDPNNTTIFVGGLDPSVTDDILKTVFGQY 298
T + + A + + + +DP N TI V GL VT++ L +
Sbjct: 263 KPQPVTNIVHSDRLASPAIEEEVKLPKHARFSDPTNNTIVVHGLSGKVTEEELALHLSSF 322
Query: 299 GELVHVKIPAGKRCGFVQFANR 320
GE+++ + + G+V+F NR
Sbjct: 323 GEILYCTLSSDFDSGYVKFYNR 344
>gi|254577373|ref|XP_002494673.1| ZYRO0A07018p [Zygosaccharomyces rouxii]
gi|238937562|emb|CAR25740.1| ZYRO0A07018p [Zygosaccharomyces rouxii]
Length = 558
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/287 (34%), Positives = 141/287 (49%), Gaps = 47/287 (16%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF-----------SEGYGFIEFVS 124
L++GDL P +E+ I I+G GE S VIR N + GY F+EF S
Sbjct: 47 LYMGDLDPSWDENTIRQIWGSLGE--SNVVIRLMLHNNVSGSGTMGPRNNLGYCFLEFPS 104
Query: 125 HAAAERVLQTFNGTQMPS-TEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
A L NG Q+P+ + +LNWA+ + ++++FVGDLA +VT+ L
Sbjct: 105 TVHASNALLK-NGMQIPNFVHKRLKLNWASSSHSSAGAFN--EYSVFVGDLAPNVTESQL 161
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
E F + ++S K+V D+ TG SKGY FV+F + + Q R++ EM G+ S R +R+
Sbjct: 162 FELFISRFNSTSHVKIVYDQLTGVSKGYAFVKFTNPAHQQRALLEMQGIFLSGRAIRVSN 221
Query: 244 AAT-------KKAATGQQYQKATYQNTQGSQGEN-----------------------DPN 273
A K ATG + G N DPN
Sbjct: 222 AGHLQNSADGKSKATGAASASNANAVGGINTGNNSGLMSGSQFMYPVQPQPALNSFTDPN 281
Query: 274 NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
NTT+FVGGL V +D L+ F +G +V+VKIP GK CGFVQ+ +R
Sbjct: 282 NTTVFVGGLSSLVAEDELRAYFQPFGTIVYVKIPVGKGCGFVQYVDR 328
>gi|159480296|ref|XP_001698220.1| hypothetical protein CHLREDRAFT_193148 [Chlamydomonas reinhardtii]
gi|158273718|gb|EDO99505.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1212
Score = 145 bits (365), Expect = 3e-32, Method: Composition-based stats.
Identities = 76/154 (49%), Positives = 99/154 (64%), Gaps = 1/154 (0%)
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
F++FVGDL +V D+ L+ FR + SV+ AKV+ D TGRSKG+GFVRF E E+ R++
Sbjct: 12 FSLFVGDLPPEVHDHFLESFFRQYFPSVRSAKVMMDNITGRSKGFGFVRFAVEGERDRAL 71
Query: 227 TEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSV 286
EMNGV S+R + +A A TQ GE DP NTT+FVGGL V
Sbjct: 72 NEMNGVFISSRQHTLSASAVSALAPCASNTHCRNTPTQ-LPGELDPQNTTLFVGGLSAHV 130
Query: 287 TDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
++D L+ VFG+YGE+ +VKIP GK CGFV FA+R
Sbjct: 131 SEDALRGVFGRYGEISYVKIPPGKGCGFVHFADR 164
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 27/176 (15%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SL++GDL P + + ++ S F V S KV+ + T S+G+GF+ F +R L
Sbjct: 13 SLFVGDLPPEVHDHFLESFFRQYFPSVRSAKVMMDNITGRSKGFGFVRFAVEGERDRALN 72
Query: 134 TFNGTQMPSTEQNFRL----------------NWATYGAGERRQDDGPDFTIFVGDLAAD 177
NG + S + N T GE D + T+FVG L+A
Sbjct: 73 EMNGVFISSRQHTLSASAVSALAPCASNTHCRNTPTQLPGEL---DPQNTTLFVGGLSAH 129
Query: 178 VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
V++ L+ F Y + K+ KG GFV F D +M E+NG +
Sbjct: 130 VSEDALRGVF-GRYGEISYVKIPP------GKGCGFVHFADRQAAEYAMQEVNGTI 178
>gi|406603569|emb|CCH44882.1| Negative growth regulatory protein NGR1 [Wickerhamomyces ciferrii]
Length = 641
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 118/206 (57%), Gaps = 16/206 (7%)
Query: 51 PVP-PPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNK 109
P+P PP+ +Q SS ++LW+GDL PW +E I ++ G+ V K+I+ K
Sbjct: 60 PIPNPPTATSQ-------TSSSPPKTLWMGDLDPWSDEDAIVHLWSTLGKRVLVKLIKAK 112
Query: 110 Q-------TNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD 162
+ GY FIEF ++ A+ L + NG+Q+P+T + FRLNWA+
Sbjct: 113 KGTPAATLNTGHAGYCFIEFETYDDAKSAL-SLNGSQIPNTNRLFRLNWASGATLSSPIP 171
Query: 163 DGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
P+F++FVGDL+ T+ L F+ + SVK +V+TD TG S+ +GFVRF DE E+
Sbjct: 172 QSPEFSLFVGDLSPSTTEAHLLALFQTHFKSVKTVRVMTDPITGTSRCFGFVRFSDEEER 231
Query: 223 LRSMTEMNGVLCSTRPMRIGPAATKK 248
R++TEM GV C+ RP+R+ A +
Sbjct: 232 RRALTEMQGVWCAGRPLRVALATPRN 257
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 34/50 (68%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DP NTT+F+GGL P + + L +F +G + HVKIP GK CGF++F R
Sbjct: 383 DPTNTTVFIGGLAPGIPEQTLAALFQPFGNITHVKIPPGKGCGFIRFDKR 432
>gi|323337302|gb|EGA78555.1| Nam8p [Saccharomyces cerevisiae Vin13]
Length = 523
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 150/304 (49%), Gaps = 60/304 (19%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNF----------SEGYGFIEFVS 124
L++GDL P +++ + I+ GE ++ +++ N N ++GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115
Query: 125 HAAAERVLQTFNGTQMPST-EQNFRLNWATYGAGERRQ-----DDGPDFTIFVGDLAADV 178
A L NG +P+ + +LNWAT G + +IFVGDLA +V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNV 174
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T+ L E F Y+S AK+V D+ TG SKGYGFV+F + EQ +++EM GV + R
Sbjct: 175 TESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 239 MRIGPAATKK--AATGQQYQKATYQ-NTQG-------------SQGEN------------ 270
+++GP + ++ + Y +++ N + S G N
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNXMGFKRNHMSQF 294
Query: 271 --------------DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQ 316
DPNNTT+F+GGL VT+D L+ F +G +V+VKIP GK CGFVQ
Sbjct: 295 IYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKXCGFVQ 354
Query: 317 FANR 320
+ +R
Sbjct: 355 YVDR 358
>gi|344245053|gb|EGW01157.1| tRNA selenocysteine 1-associated protein 1 [Cricetulus griseus]
Length = 283
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 111/173 (64%), Gaps = 8/173 (4%)
Query: 81 LQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQ 139
L+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L NG
Sbjct: 6 LEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKP 65
Query: 140 MP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGA 197
+P + + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY S +G
Sbjct: 66 LPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGG 122
Query: 198 KVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
KVV D+ TG SKGYGFV+F DE EQ R++TE G + ++P+R+ A K +
Sbjct: 123 KVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 174
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 21/144 (14%)
Query: 183 LQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
+ F + +V K++ +R TG GY FV F D + + + ++NG +P+
Sbjct: 15 ISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKING-----KPL--- 66
Query: 243 PAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQY---- 298
P AT Y ATY G Q +N P ++FVG L P V D +L F +
Sbjct: 67 PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVDDGMLYEFFVKVYPSC 119
Query: 299 --GELVHVKIPAGKRCGFVQFANR 320
G++V + K GFV+F +
Sbjct: 120 RGGKVVLDQTGVSKGYGFVKFTDE 143
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 62 YGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIE 121
YG PD S + SL++GDL P +++ + F G + QT S+GYGF++
Sbjct: 82 YGKQPDNSPE--YSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVK 139
Query: 122 FVSHAAAERVLQTFNG 137
F +R L G
Sbjct: 140 FTDELEQKRALTECQG 155
>gi|256269427|gb|EEU04722.1| Nam8p [Saccharomyces cerevisiae JAY291]
Length = 523
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 147/304 (48%), Gaps = 60/304 (19%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNF----------SEGYGFIEFVS 124
L++GDL P +++ + I+ GE ++ +++ N N ++GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115
Query: 125 HAAAERVLQTFNGTQMPST-EQNFRLNWATYGAGERRQ-----DDGPDFTIFVGDLAADV 178
A L NG +P+ + +LNWAT G + +IFVGDLA +V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNV 174
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T+ L E F Y+S AK+V D+ TG SKGYGFV+F + EQ +++EM GV + R
Sbjct: 175 TESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 239 MRIGPAA-------------------------TKKAATGQQYQKATYQNTQGSQGE---- 269
+++GP + ++ + GQ + N + +
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMDFKRNDMSQF 294
Query: 270 -------------NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQ 316
DPNNTT+F+GGL VT+D L+ F +G +V+VKIP GK CGFVQ
Sbjct: 295 IYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQ 354
Query: 317 FANR 320
+ +R
Sbjct: 355 YVDR 358
>gi|6321878|ref|NP_011954.1| Nam8p [Saccharomyces cerevisiae S288c]
gi|730108|sp|Q00539.2|NAM8_YEAST RecName: Full=Protein NAM8
gi|487934|gb|AAB68928.1| Nam8p: Putative RNA binding proteins [Saccharomyces cerevisiae]
gi|520596|dbj|BAA02016.1| Mre2 protein [Saccharomyces cerevisiae]
gi|190405867|gb|EDV09134.1| RNA-binding protein [Saccharomyces cerevisiae RM11-1a]
gi|207344656|gb|EDZ71726.1| YHR086Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|285809994|tpg|DAA06781.1| TPA: Nam8p [Saccharomyces cerevisiae S288c]
gi|323333247|gb|EGA74645.1| Nam8p [Saccharomyces cerevisiae AWRI796]
Length = 523
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 150/304 (49%), Gaps = 60/304 (19%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNF----------SEGYGFIEFVS 124
L++GDL P +++ + I+ GE ++ +++ N N ++GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115
Query: 125 HAAAERVLQTFNGTQMPST-EQNFRLNWATYGAGERRQ-----DDGPDFTIFVGDLAADV 178
A L NG +P+ + +LNWAT G + +IFVGDLA +V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNV 174
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T+ L E F Y+S AK+V D+ TG SKGYGFV+F + EQ +++EM GV + R
Sbjct: 175 TESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 239 MRIGPAATKK--AATGQQYQKATYQ-NTQG-------------SQGEN------------ 270
+++GP + ++ + Y +++ N + S G N
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMGFKRNHMSQF 294
Query: 271 --------------DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQ 316
DPNNTT+F+GGL VT+D L+ F +G +V+VKIP GK CGFVQ
Sbjct: 295 IYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKCCGFVQ 354
Query: 317 FANR 320
+ +R
Sbjct: 355 YVDR 358
>gi|349578638|dbj|GAA23803.1| K7_Nam8p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392298893|gb|EIW09988.1| Nam8p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 523
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 150/304 (49%), Gaps = 60/304 (19%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNF----------SEGYGFIEFVS 124
L++GDL P +++ + I+ GE ++ +++ N N ++GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115
Query: 125 HAAAERVLQTFNGTQMPST-EQNFRLNWATYGAGERRQ-----DDGPDFTIFVGDLAADV 178
A L NG +P+ + +LNWAT G + +IFVGDLA +V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNV 174
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T+ L E F Y+S AK+V D+ TG SKGYGFV+F + EQ +++EM GV + R
Sbjct: 175 TESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 239 MRIGPAATKK--AATGQQYQKATYQ-NTQG-------------SQGEN------------ 270
+++GP + ++ + Y +++ N + S G N
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMDFKRNHMSQF 294
Query: 271 --------------DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQ 316
DPNNTT+F+GGL VT+D L+ F +G +V+VKIP GK CGFVQ
Sbjct: 295 IYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQ 354
Query: 317 FANR 320
+ +R
Sbjct: 355 YVDR 358
>gi|259146840|emb|CAY80096.1| Nam8p [Saccharomyces cerevisiae EC1118]
gi|323348251|gb|EGA82500.1| Nam8p [Saccharomyces cerevisiae Lalvin QA23]
Length = 523
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 150/305 (49%), Gaps = 62/305 (20%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNF----------SEGYGFIEFVS 124
L++GDL P +++ + I+ GE ++ +++ N N ++GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115
Query: 125 HAAAERVLQTFNGTQMPST-EQNFRLNWATYGAGERRQ-----DDGPDFTIFVGDLAADV 178
A L NG +P+ + +LNWAT G + +IFVGDLA +V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNV 174
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T+ L E F Y+S AK+V D+ TG SKGYGFV+F + EQ +++EM GV + R
Sbjct: 175 TESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 239 MRIGPAA-------------------------TKKAATGQQYQKATYQNTQGSQGEN--- 270
+++GP + ++ + GQ + + NT G + +
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSF-LSNGNNTMGFKRNHMSQ 293
Query: 271 ---------------DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFV 315
DPNNTT+F+GGL VT+D L+ F +G +V+VKIP GK CGFV
Sbjct: 294 FIYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFV 353
Query: 316 QFANR 320
Q+ +R
Sbjct: 354 QYVDR 358
>gi|365765198|gb|EHN06710.1| Nam8p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 523
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 150/305 (49%), Gaps = 62/305 (20%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNF----------SEGYGFIEFVS 124
L++GDL P +++ + I+ GE ++ +++ N N ++GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNXSRSSMGPKNNQGYCFVDFPS 115
Query: 125 HAAAERVLQTFNGTQMPST-EQNFRLNWATYGAGERRQ-----DDGPDFTIFVGDLAADV 178
A L NG +P+ + +LNWAT G + +IFVGDLA +V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNV 174
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T+ L E F Y+S AK+V D+ TG SKGYGFV+F + EQ +++EM GV + R
Sbjct: 175 TESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 239 MRIGPAA-------------------------TKKAATGQQYQKATYQNTQGSQGEN--- 270
+++GP + ++ + GQ + + NT G + +
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSF-LSNGNNTMGFKRNHMSQ 293
Query: 271 ---------------DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFV 315
DPNNTT+F+GGL VT+D L+ F +G +V+VKIP GK CGFV
Sbjct: 294 FIYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFV 353
Query: 316 QFANR 320
Q+ +R
Sbjct: 354 QYVDR 358
>gi|323304584|gb|EGA58347.1| Nam8p [Saccharomyces cerevisiae FostersB]
Length = 523
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 150/304 (49%), Gaps = 60/304 (19%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNF----------SEGYGFIEFVS 124
L++GDL P +++ + I+ GE ++ +++ N N ++GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115
Query: 125 HAAAERVLQTFNGTQMPST-EQNFRLNWATYGAGERRQ-----DDGPDFTIFVGDLAADV 178
A L NG +P+ + +LNWAT G + +IFVGDLA +V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNV 174
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T+ L E F Y+S AK+V D+ TG SKGYGFV+F + EQ +++EM GV + R
Sbjct: 175 TESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 239 MRIGPAATKK--AATGQQYQKATYQ-NTQG-------------SQGEN------------ 270
+++GP + ++ + Y +++ N + S G N
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMGFKRNHMSQF 294
Query: 271 --------------DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQ 316
DPNNTT+F+GGL VT+D L+ F +G +V+VKIP GK CGFVQ
Sbjct: 295 IYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQ 354
Query: 317 FANR 320
+ +R
Sbjct: 355 YVDR 358
>gi|431891176|gb|ELK02053.1| tRNA selenocysteine 1-associated protein 1 [Pteropus alecto]
Length = 270
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 110/173 (63%), Gaps = 8/173 (4%)
Query: 81 LQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQ 139
L+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L NG
Sbjct: 18 LEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKP 77
Query: 140 MPST--EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGA 197
+P + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY S +G
Sbjct: 78 LPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGG 134
Query: 198 KVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
KVV D+ TG SKGYGFV+F DE EQ R++TE G + ++P+R+ A K +
Sbjct: 135 KVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 186
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 65/143 (45%), Gaps = 21/143 (14%)
Query: 183 LQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
+ F + +V K++ +R TG GY FV F D + + + ++NG +P+
Sbjct: 27 ISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKING-----KPL--- 78
Query: 243 PAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQY---- 298
P AT Y ATY G Q +N P ++FVG L P V D +L F +
Sbjct: 79 PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVDDGMLYEFFVKVYPSC 131
Query: 299 --GELVHVKIPAGKRCGFVQFAN 319
G++V + K GFV+F +
Sbjct: 132 RGGKVVLDQTGVSKGYGFVKFTD 154
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 62 YGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIE 121
YG PD S + SL++GDL P +++ + F G + QT S+GYGF++
Sbjct: 94 YGKQPDNSPE--YSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVK 151
Query: 122 FVSHAAAERVLQTFNG 137
F +R L G
Sbjct: 152 FTDELEQKRALTECQG 167
>gi|367014399|ref|XP_003681699.1| hypothetical protein TDEL_0E02450 [Torulaspora delbrueckii]
gi|359749360|emb|CCE92488.1| hypothetical protein TDEL_0E02450 [Torulaspora delbrueckii]
Length = 472
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 139/278 (50%), Gaps = 36/278 (12%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVI---RNKQTNFSEGYGFIEFVSHAAAERV 131
L++GDL P +E+ I SI+ GE V K++ RN GY F++F S + A
Sbjct: 50 LYMGDLDPSWDENVIRSIWNSLGESNVEIKLMWNNRNAGVRTHLGYCFVQFSSRSQASNA 109
Query: 132 LQTFNGTQMPST-EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
L NG +P + RLNW++ A D + ++FVGDLA +VT+ L E F +
Sbjct: 110 LLK-NGMAIPGYPSKTLRLNWSS--ASGNSADGSNEISVFVGDLAPNVTESDLFELFISK 166
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK-- 248
S AKV+ D+ TG SKGY FVRFG++ +Q R++ EM G R +R+G A +
Sbjct: 167 CPSTSNAKVMYDQVTGVSKGYAFVRFGNQEDQQRALQEMTGTFLKGRAIRVGSAGHQNQR 226
Query: 249 --------------AATGQQYQKATYQNTQGSQ------------GENDPNNTTIFVGGL 282
AT + A +T SQ D NNTT+FV L
Sbjct: 227 NRNGPGLENKLKGLNATVSSPKPANISSTNFSQFILPTQQLPPLNSFTDRNNTTLFVSSL 286
Query: 283 DPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
VT++ LK F +G +++ K+P K+CGFVQ+ +R
Sbjct: 287 SHMVTENELKAFFQPFGNVIYAKLPENKQCGFVQYVDR 324
>gi|449273177|gb|EMC82785.1| tRNA selenocysteine 1-associated protein 1, partial [Columba livia]
Length = 278
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 109/171 (63%), Gaps = 8/171 (4%)
Query: 81 LQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQ 139
L+P+M+E++++ F GE V S K+IRN+ T GY F+EF A AE+ L NG
Sbjct: 1 LEPYMDENFVSRAFATMGELVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKP 60
Query: 140 MP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGA 197
+P + + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY S +G
Sbjct: 61 LPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGG 117
Query: 198 KVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
KVV D+ G S+GYGFV+F DE EQ R++TE G + ++P+R+ A K
Sbjct: 118 KVVLDQ-AGVSRGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPK 167
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 21/133 (15%)
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V K++ +R TG GY FV F D + + + ++NG +P+ P AT
Sbjct: 21 VLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKING-----KPL---PGATPAKRFKL 72
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQY------GELVHVKIP 307
Y ATY G Q +N P ++FVG L P V D +L F + G++V +
Sbjct: 73 NY--ATY----GKQPDNSPE-YSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQAG 125
Query: 308 AGKRCGFVQFANR 320
+ GFV+F +
Sbjct: 126 VSRGYGFVKFTDE 138
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 62 YGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIE 121
YG PD S + SL++GDL P +++ + F G + Q S GYGF++
Sbjct: 77 YGKQPDNSPE--YSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQAGVSRGYGFVK 134
Query: 122 FVSHAAAERVLQTFNG 137
F +R L G
Sbjct: 135 FTDELEQKRALTECQG 150
>gi|323308830|gb|EGA62067.1| Nam8p [Saccharomyces cerevisiae FostersO]
Length = 466
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 148/302 (49%), Gaps = 60/302 (19%)
Query: 78 IGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNF----------SEGYGFIEFVSHA 126
+GDL P +++ + I+ GE ++ +++ N N ++GY F++F S
Sbjct: 1 MGDLDPTWDKNTVRXIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPSST 60
Query: 127 AAERVLQTFNGTQMPST-EQNFRLNWATYGAGERRQ-----DDGPDFTIFVGDLAADVTD 180
A L NG +P+ + +LNWAT G + +IFVGDLA +VT+
Sbjct: 61 HAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNVTE 119
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L E F Y+S AK+V D+ TG SKGYGFV+F + EQ +++EM GV + R ++
Sbjct: 120 SQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRAIK 179
Query: 241 IGPAATKK--AATGQQYQKATYQ-NTQG-------------SQGEN-------------- 270
+GP + ++ + Y +++ N + S G N
Sbjct: 180 VGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMXFKRNHMSQFIY 239
Query: 271 ------------DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFA 318
DPNNTT+F+GGL VT+D L+ F +G +V+VKIP GK CGFVQ+
Sbjct: 240 PVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQYV 299
Query: 319 NR 320
+R
Sbjct: 300 DR 301
>gi|403335112|gb|EJY66726.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 588
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 113/206 (54%), Gaps = 32/206 (15%)
Query: 72 GIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSE-----GYGFIEFVSHA 126
G ++LWIGD++ WM+E Y+ ++F + ++ K+I+NK + GYGF+EF SH
Sbjct: 97 GSKTLWIGDIENWMDEQYVINLFQGIAQVMNIKLIKNKDNRKNSSAPQFGYGFVEFTSHE 156
Query: 127 AAERVLQTFNGTQMPST-EQNFRLNWATYGA-----------------------GERRQD 162
A+ + T NG +PS +NF+LNWA++ G R+Q+
Sbjct: 157 IAKSIFTTLNGASIPSLPNKNFKLNWASHQVAYNKTSYQNYQNNGHAQNYSNHQGSRKQE 216
Query: 163 DGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
+ + I+VGDL +V D +L TF+ Y SV AKV+ D T +SK YGFV+FG E
Sbjct: 217 E---YQIYVGDLDPNVNDQMLMITFQKRYPSVNQAKVIMDPITRQSKCYGFVKFGIIEEG 273
Query: 223 LRSMTEMNGVLCSTRPMRIGPAATKK 248
+M EM G L T+ M+I A+ KK
Sbjct: 274 QNAMAEMQGKLLLTKAMKINHASQKK 299
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 75/174 (43%), Gaps = 30/174 (17%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSK-----GYGFVRFGDESEQ 222
T+++GD+ + + + F+ + + V K++ ++ ++ GYGFV F
Sbjct: 100 TLWIGDIENWMDEQYVINLFQGI-AQVMNIKLIKNKDNRKNSSAPQFGYGFVEFTSHEIA 158
Query: 223 LRSMTEMNGVLCSTRP---MRIGPAATKKAATGQQYQKATYQNTQGS---------QGEN 270
T +NG + P ++ A+ + A Y K +YQN Q + QG
Sbjct: 159 KSIFTTLNGASIPSLPNKNFKLNWASHQVA-----YNKTSYQNYQNNGHAQNYSNHQGSR 213
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQY------GELVHVKIPAGKRC-GFVQF 317
I+VG LDP+V D +L F + +++ I +C GFV+F
Sbjct: 214 KQEEYQIYVGDLDPNVNDQMLMITFQKRYPSVNQAKVIMDPITRQSKCYGFVKF 267
>gi|375152130|gb|AFA36523.1| nucleic acid binding protein, partial [Lolium perenne]
Length = 164
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 91/128 (71%), Gaps = 8/128 (6%)
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SVKGAKV+ D TGRS+GYGFVRF D++++ +MTEMNG+ CSTRP+RIGPA ++
Sbjct: 2 SVKGAKVIIDANTGRSRGYGFVRFADDNDKSHAMTEMNGIYCSTRPIRIGPATPRRTGD- 60
Query: 253 QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+ +T G + D N T++VGGLDP+V++D L+ F +YG++ VKIP GK+C
Sbjct: 61 ------SGSSTPG-HSDGDSTNRTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQC 113
Query: 313 GFVQFANR 320
GFVQ+ NR
Sbjct: 114 GFVQYVNR 121
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 53 PPPSQQTQPYGVAPDASSDGI---RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNK 109
P ++T G + SDG R++++G L P + E + F G+ S K+ K
Sbjct: 52 PATPRRTGDSGSSTPGHSDGDSTNRTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGK 111
Query: 110 QTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWA 152
Q GF+++V+ A+ LQ NG+ + +Q RL+W
Sbjct: 112 QC------GFVQYVNRTDAKEALQGLNGSVI--GKQVVRLSWG 146
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 65/146 (44%), Gaps = 17/146 (11%)
Query: 104 KVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWAT------YGAG 157
KVI + T S GYGF+ F + NG + + + R+ AT G+
Sbjct: 7 KVIIDANTGRSRGYGFVRFADDNDKSHAMTEMNG--IYCSTRPIRIGPATPRRTGDSGSS 64
Query: 158 ERRQDDGP--DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVR 215
DG + T++VG L +V++ L++ F A Y V K+ K GFV+
Sbjct: 65 TPGHSDGDSTNRTVYVGGLDPNVSEDELRKAF-AKYGDVASVKIPL------GKQCGFVQ 117
Query: 216 FGDESEQLRSMTEMNGVLCSTRPMRI 241
+ + ++ ++ +NG + + +R+
Sbjct: 118 YVNRTDAKEALQGLNGSVIGKQVVRL 143
>gi|156843736|ref|XP_001644934.1| hypothetical protein Kpol_530p46 [Vanderwaltozyma polyspora DSM
70294]
gi|156115587|gb|EDO17076.1| hypothetical protein Kpol_530p46 [Vanderwaltozyma polyspora DSM
70294]
Length = 587
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 129/262 (49%), Gaps = 58/262 (22%)
Query: 116 GYGFIEFVSHAAAERVLQTFNGTQMPST-------------EQNFRLNWATYGAGERRQD 162
GY F+EF + A+ L + N +P+ ++NFRLNWA+ +
Sbjct: 165 GYCFVEFQNQEDAQYAL-SLNSNPIPNILSDSNNLYTNPTGKRNFRLNWASGATLQSSIP 223
Query: 163 DGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
P+F++FVGDL+ T+ L F+ Y SVK +V+TD TG S+ +GF+RFGD+ E+
Sbjct: 224 VTPEFSLFVGDLSPTATEADLLSLFQQQYRSVKTVRVMTDPITGASRCFGFIRFGDQDER 283
Query: 223 LRSMTEMNGVLCSTRPMRIGPA-------------------------------------A 245
R+++EMNGV C RP+R+ A +
Sbjct: 284 KRALSEMNGVWCQGRPLRVAYATPRNNNNIISNQQNTATQLSHHGNSYHNNSHNNGNNRS 343
Query: 246 TKKAATGQQYQKATYQNTQGSQ-----GENDPNN--TTIFVGGLDPSVTDDILKTVFGQY 298
K +++ YQ NT Q N N +T+F+GGL P + + ++++F +
Sbjct: 344 RKNSSSILNYQNNYTANTNHGQPPQLSKSNSQNELVSTVFIGGLSPKINESQVRSLFKPF 403
Query: 299 GELVHVKIPAGKRCGFVQFANR 320
G +V+VK+P GK CGFV+F NR
Sbjct: 404 GNIVNVKLPPGKNCGFVKFENR 425
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 51 PVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQ 110
P+PP S + SS+ R+LW+GDL P +ES I I+ V+ K+IR K+
Sbjct: 9 PLPPSS--------TIETSSEPPRTLWMGDLDPSFDESTIQQIWKSLDRLVTVKLIRAKK 60
>gi|196008869|ref|XP_002114300.1| hypothetical protein TRIADDRAFT_57967 [Trichoplax adhaerens]
gi|190583319|gb|EDV23390.1| hypothetical protein TRIADDRAFT_57967 [Trichoplax adhaerens]
Length = 344
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 107/172 (62%), Gaps = 8/172 (4%)
Query: 81 LQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQ 139
L+ +M+E++I + F G V S K+IRN+ GY F++F +AE L+ NG
Sbjct: 46 LETYMDETFIRNAFASVGRTVLSVKLIRNRVVGGPAGYCFVDFPDPQSAEDCLKQVNGLP 105
Query: 140 MPST--EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGA 197
+P + ++ F+LNWAT+GA R P+F+IFVGDL DVTD VL+ F + S KGA
Sbjct: 106 LPGSNPQKRFKLNWATHGA---RDAGNPEFSIFVGDLTPDVTDLVLRNFFCERFPSCKGA 162
Query: 198 KVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKK 248
KVV D+ G S+GYGFVRFGDE+E R++ EM G C RP+R+ A KK
Sbjct: 163 KVVIDQ-GGNSRGYGFVRFGDENEHTRALNEMQGASGCGGRPIRVSLATPKK 213
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 19/117 (16%)
Query: 183 LQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
++ F +V +V K++ +R G GY FV F D + ++NG+ P+
Sbjct: 55 IRNAFASVGRTVLSVKLIRNRVVGGPAGYCFVDFPDPQSAEDCLKQVNGL-----PL--- 106
Query: 243 PAATKKAATGQQYQKATYQN--TQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
G QK N T G++ +P +IFVG L P VTD +L+ F +
Sbjct: 107 --------PGSNPQKRFKLNWATHGARDAGNPE-FSIFVGDLTPDVTDLVLRNFFCE 154
>gi|4026|emb|CAA46011.1| NAM8 [Saccharomyces cerevisiae]
gi|228931|prf||1814447B NAM8 gene
Length = 523
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 148/304 (48%), Gaps = 60/304 (19%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNF----------SEGYGFIEFVS 124
L++GDL P +++ + I+ GE ++ +++ N N ++GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115
Query: 125 HAAAERVLQTFNGTQMPST-EQNFRLNWATYGAGERRQ-----DDGPDFTIFVGDLAADV 178
A L NG +P+ + +LNWAT G + +IFVGDLA +V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNV 174
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T+ L E F Y+S AK+V D+ TG SKGY V+F + EQ +++EM GV + R
Sbjct: 175 TESQLLELFINRYASTSHAKIVHDQVTGMSKGYVLVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 239 MRIGPAATKK--AATGQQYQKATYQ-NTQG-------------SQGEN------------ 270
+++GP + ++ + Y +++ N + S G N
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMGFKRNHMSQF 294
Query: 271 --------------DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQ 316
DPNNTT+F+GGL VT+D L+ F +G +V+VKIP GK CGFVQ
Sbjct: 295 IYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKCCGFVQ 354
Query: 317 FANR 320
+ +R
Sbjct: 355 YVDR 358
>gi|365984507|ref|XP_003669086.1| hypothetical protein NDAI_0C01820 [Naumovozyma dairenensis CBS 421]
gi|343767854|emb|CCD23843.1| hypothetical protein NDAI_0C01820 [Naumovozyma dairenensis CBS 421]
Length = 498
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 142/302 (47%), Gaps = 59/302 (19%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGE-FVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+++G+L P E+ I SI+ GE ++ K+I NK ++GY FIEF S A L
Sbjct: 72 IYMGELDPTWTEATIKSIWKSLGEELINVKLIWNKNLGLNQGYCFIEFPSEQHASNALLK 131
Query: 135 FNGTQMPST-EQNFRLNWATYGAGERRQ--------DDGPDFTIFVGDLAADVTDYVLQE 185
NG +P + +LNW + + + ++++FVGDLAA+VT+ L +
Sbjct: 132 -NGINIPEFPRKKVKLNWTSSSSASLQGSSNSGQVPSTSTNYSVFVGDLAANVTEGQLFD 190
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F + + S AK+V D T SK YGFV+F D +Q R++ EM G+ + R ++IG
Sbjct: 191 LFISRFQSTCHAKIVHDPVTRASKCYGFVKFNDLRDQQRALVEMQGIFLNGRAIKIGTTT 250
Query: 246 TKKAATGQQYQKATYQNTQGSQGEN----------------------------------- 270
A T A N S G++
Sbjct: 251 GGSAHTNTD-NNALAPNIANSGGKSRFQGTTTNSPSSPANIGRGNTSNYRLTSLSSQFIF 309
Query: 271 ------------DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFA 318
DPNNTT+FVGGL VT++ L+ F +G +++VKIP GK CGFVQ+
Sbjct: 310 PVQQQPPLNHFTDPNNTTVFVGGLSSMVTEEQLRHCFQPFGTIIYVKIPIGKGCGFVQYF 369
Query: 319 NR 320
+R
Sbjct: 370 DR 371
>gi|393909208|gb|EFO19127.2| hypothetical protein LOAG_09365 [Loa loa]
Length = 421
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 132/247 (53%), Gaps = 10/247 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++++G+L P + E +I ++FG G KVI + ++ Y F+EF H A + LQ
Sbjct: 74 RTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGT---NDPYAFVEFADHYTAAQALQ 130
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N + E+ ++NWAT + + D F +FVGDL+ +V + L++ F A +
Sbjct: 131 AMNKRVL--LEKEMKVNWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAF-APFGE 187
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V AKV+ D TT +SKGYGFV + E R++ +MNG R +R A K TG
Sbjct: 188 VSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPTGTGA 247
Query: 254 ---QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
QY + T N + P+NT+++VG ++ S D+ L+ F ++G ++ V+I +
Sbjct: 248 GDGQYGR-TELNYDDVYNQTGPDNTSVYVGNVNSSANDEDLRAAFDKFGRILEVRIFKSQ 306
Query: 311 RCGFVQF 317
FV+F
Sbjct: 307 GYAFVRF 313
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 85/178 (47%), Gaps = 28/178 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P ++ + F GE KVIR+ T S+GYGF+ + AER ++
Sbjct: 164 VFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQM 223
Query: 136 NGTQMPSTEQNFRLNWAT------------YGAGERRQDD-----GPDFT-IFVGDLAAD 177
NG + + R NWAT YG E DD GPD T ++VG++ +
Sbjct: 224 NGQWLG--RRTIRTNWATRKPTGTGAGDGQYGRTELNYDDVYNQTGPDNTSVYVGNVNSS 281
Query: 178 VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG-VLC 234
D E RA + K +++ R +S+GY FVRF + ++ +MNG LC
Sbjct: 282 AND----EDLRAAFD--KFGRILEVRIF-KSQGYAFVRFDKKDSACNAICKMNGQELC 332
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 250 ATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP-- 307
A +Y QN G D T++VG LDPS+T+D + T+FGQ G + K+
Sbjct: 49 AYNARYHFQAAQNAGFDTGSEDHQPRTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFD 108
Query: 308 -AGKRCGFVQFANR 320
FV+FA+
Sbjct: 109 GTNDPYAFVEFADH 122
>gi|443710130|gb|ELU04461.1| hypothetical protein CAPTEDRAFT_181109 [Capitella teleta]
Length = 297
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 110/182 (60%), Gaps = 8/182 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGE-FVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+LW+GDL+P+M+E++I++ F GE VS KVI+NK T GY F+EF A R +
Sbjct: 8 TLWMGDLEPYMDEAFISNAFHTMGEGVVSVKVIKNKHTGMPTGYCFVEFPDQEGAHRAML 67
Query: 134 TFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+ NG +P + + F+LN A++G R + P+F++FVGDL DV D +L F Y
Sbjct: 68 SLNGKIVPGSMPYKRFKLNHASFG---REHLNVPEFSLFVGDLTEDVDDLILYSHFHTHY 124
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKAA 250
+++GAKVV D G+S+GYGFVRF E +Q +++ EM +P+R+ A KK
Sbjct: 125 KNLRGAKVVVDE-NGKSRGYGFVRFTCEKDQQKALVEMQHYTGIGRKPIRVSLATPKKTQ 183
Query: 251 TG 252
G
Sbjct: 184 AG 185
>gi|170592088|ref|XP_001900801.1| RNA recognition motif. [Brugia malayi]
gi|158591668|gb|EDP30272.1| RNA recognition motif [Brugia malayi]
Length = 421
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 132/247 (53%), Gaps = 10/247 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++++G+L P + E +I ++FG G KVI + ++ Y F+EF H A + LQ
Sbjct: 74 RTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGT---NDPYAFVEFADHYTAAQALQ 130
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N + E+ ++NWAT + + D F +FVGDL+ +V + L++ F A +
Sbjct: 131 AMNKRVL--LEKEMKVNWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAF-APFGE 187
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V AKV+ D TT +SKGYGFV + E R++ +MNG R +R A K TG
Sbjct: 188 VSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPTGTGA 247
Query: 254 ---QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
QY ++ N + P+NT+++VG ++ S D+ L+ F ++G ++ V+I +
Sbjct: 248 GDGQYGRSEL-NYDDVYNQTGPDNTSVYVGNVNSSANDEDLRAAFDKFGRILEVRIFKSQ 306
Query: 311 RCGFVQF 317
FV+F
Sbjct: 307 GYAFVRF 313
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 85/178 (47%), Gaps = 28/178 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P ++ + F GE KVIR+ T S+GYGF+ + AER ++
Sbjct: 164 VFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQM 223
Query: 136 NGTQMPSTEQNFRLNWAT------------YGAGERRQDD-----GPDFT-IFVGDLAAD 177
NG + + R NWAT YG E DD GPD T ++VG++ +
Sbjct: 224 NGQWLG--RRTIRTNWATRKPTGTGAGDGQYGRSELNYDDVYNQTGPDNTSVYVGNVNSS 281
Query: 178 VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG-VLC 234
D E RA + K +++ R +S+GY FVRF + ++ +MNG LC
Sbjct: 282 AND----EDLRAAFD--KFGRILEVRIF-KSQGYAFVRFDKKDSACNAICKMNGQELC 332
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 250 ATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP-- 307
A +Y QN G D T++VG LDPS+T+D + T+FGQ G + K+
Sbjct: 49 AYNARYHFQAAQNAGFDTGSEDHQPRTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFD 108
Query: 308 -AGKRCGFVQFANR 320
FV+FA+
Sbjct: 109 GTNDPYAFVEFADH 122
>gi|312086091|ref|XP_003144941.1| hypothetical protein LOAG_09365 [Loa loa]
Length = 394
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 132/247 (53%), Gaps = 10/247 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++++G+L P + E +I ++FG G KVI + ++ Y F+EF H A + LQ
Sbjct: 47 RTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGT---NDPYAFVEFADHYTAAQALQ 103
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N + E+ ++NWAT + + D F +FVGDL+ +V + L++ F A +
Sbjct: 104 AMNKRVL--LEKEMKVNWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAF-APFGE 160
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V AKV+ D TT +SKGYGFV + E R++ +MNG R +R A K TG
Sbjct: 161 VSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPTGTGA 220
Query: 254 ---QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
QY + T N + P+NT+++VG ++ S D+ L+ F ++G ++ V+I +
Sbjct: 221 GDGQYGR-TELNYDDVYNQTGPDNTSVYVGNVNSSANDEDLRAAFDKFGRILEVRIFKSQ 279
Query: 311 RCGFVQF 317
FV+F
Sbjct: 280 GYAFVRF 286
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 85/178 (47%), Gaps = 28/178 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P ++ + F GE KVIR+ T S+GYGF+ + AER ++
Sbjct: 137 VFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQM 196
Query: 136 NGTQMPSTEQNFRLNWAT------------YGAGERRQDD-----GPDFT-IFVGDLAAD 177
NG + + R NWAT YG E DD GPD T ++VG++ +
Sbjct: 197 NGQWLG--RRTIRTNWATRKPTGTGAGDGQYGRTELNYDDVYNQTGPDNTSVYVGNVNSS 254
Query: 178 VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG-VLC 234
D E RA + K +++ R +S+GY FVRF + ++ +MNG LC
Sbjct: 255 AND----EDLRAAFD--KFGRILEVRIF-KSQGYAFVRFDKKDSACNAICKMNGQELC 305
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 250 ATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP-- 307
A +Y QN G D T++VG LDPS+T+D + T+FGQ G + K+
Sbjct: 22 AYNARYHFQAAQNAGFDTGSEDHQPRTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFD 81
Query: 308 -AGKRCGFVQFAN 319
FV+FA+
Sbjct: 82 GTNDPYAFVEFAD 94
>gi|410079368|ref|XP_003957265.1| hypothetical protein KAFR_0D04830 [Kazachstania africana CBS 2517]
gi|372463850|emb|CCF58130.1| hypothetical protein KAFR_0D04830 [Kazachstania africana CBS 2517]
Length = 406
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/269 (33%), Positives = 132/269 (49%), Gaps = 37/269 (13%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
L++GDL +E ++ I+ GE N Y FI F+ A L
Sbjct: 34 LYMGDLDLSWDERVVSQIWASLGE-------PNVSVKMMNRYCFITFLDSLTASNALLK- 85
Query: 136 NGTQMPSTE-QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
NG +P + +LNWA + + ++IFVGDL+ +VT+ L + F Y+S
Sbjct: 86 NGMLIPGYGGKRLKLNWA-----QASSNASNGYSIFVGDLSPNVTEAQLFDLFINKYAST 140
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK------- 247
AK+V D+ TG S+GYGFVRF +Q ++ EM G+ + R ++IG K
Sbjct: 141 DHAKIVYDQATGVSRGYGFVRFNSLMDQQHALLEMQGIFLNGRAIKIGMTGNKQGQLQGQ 200
Query: 248 --KAATGQQYQKATYQNTQGSQGE--------------NDPNNTTIFVGGLDPSVTDDIL 291
+ Q ++ NT +Q + DPNNTT+FVGGL VT+D L
Sbjct: 201 QHQGQQQQDFKVPIQSNTPMNQSQFMYPVQQQPTLNHFTDPNNTTVFVGGLSSLVTEDEL 260
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQFANR 320
+ F +G +V+VKIP GK CGFVQ+ +R
Sbjct: 261 REYFKPFGTIVYVKIPVGKGCGFVQYIDR 289
>gi|402587661|gb|EJW81596.1| nucleolysin TIAR [Wuchereria bancrofti]
Length = 440
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 132/247 (53%), Gaps = 10/247 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++++G+L P + E +I ++FG G KVI + ++ Y F+EF H A + LQ
Sbjct: 93 RTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGT---NDPYAFVEFADHYTAAQALQ 149
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N + E+ ++NWAT + + D F +FVGDL+ +V + L++ F A +
Sbjct: 150 AMNKRVL--LEKEMKVNWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAF-APFGE 206
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V AKV+ D TT +SKGYGFV + E R++ +MNG R +R A K TG
Sbjct: 207 VSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPTGTGA 266
Query: 254 ---QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
QY ++ N + P+NT+++VG ++ + D+ L+ F ++G ++ V+I +
Sbjct: 267 GDGQYGRSEL-NYDDVYNQTGPDNTSVYVGNVNSNANDEDLRAAFDKFGRILEVRIFKSQ 325
Query: 311 RCGFVQF 317
FV+F
Sbjct: 326 GYAFVRF 332
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 86/178 (48%), Gaps = 28/178 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P ++ + F GE KVIR+ T S+GYGF+ + AER ++
Sbjct: 183 VFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQM 242
Query: 136 NGTQMPSTEQNFRLNWAT------------YGAGERRQDD-----GPDFT-IFVGDLAAD 177
NG + + R NWAT YG E DD GPD T ++VG++ ++
Sbjct: 243 NGQWLG--RRTIRTNWATRKPTGTGAGDGQYGRSELNYDDVYNQTGPDNTSVYVGNVNSN 300
Query: 178 VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG-VLC 234
D E RA + K +++ R +S+GY FVRF + ++ +MNG LC
Sbjct: 301 AND----EDLRAAFD--KFGRILEVRIF-KSQGYAFVRFDKKDSACNAICKMNGQELC 351
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 250 ATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP-- 307
A +Y QN G D T++VG LDPS+T+D + T+FGQ G + K+
Sbjct: 68 AYNARYHFQAAQNAGFDTGSEDHQPRTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFD 127
Query: 308 -AGKRCGFVQFAN 319
FV+FA+
Sbjct: 128 GTNDPYAFVEFAD 140
>gi|425768240|gb|EKV06770.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum Pd1]
gi|425770410|gb|EKV08883.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum PHI26]
Length = 482
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 132/266 (49%), Gaps = 25/266 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFS---EGYGFIEFVSHAAAER 130
R+L++G L P + E + IF TG VS K+I +K F+ YGF+EF AAER
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNGQFTTKGHNYGFVEFDDPGAAER 150
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A
Sbjct: 151 AMQTLNGRRIHQSE--IRVNWAYQSNSTSKEDTSNHFHIFVGDLSNEVNDEVLTQAFSA- 207
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
+ SV A+V+ D TGRS+GYGFV F D +E +++ M+G +R +R A K
Sbjct: 208 FGSVSEARVMWDMKTGRSRGYGFVAFRDRTEADKALNSMDGEWLGSRAIRCNWANQKGQP 267
Query: 251 TGQQYQKATYQN-------------TQGSQ-----GENDPN-NTTIFVGGLDPSVTDDIL 291
+ Q Q T G Q + P TT +VG L P T + L
Sbjct: 268 SISQQQALVAMGMTPTTAFGHHHFPTHGIQSYDMVAQQTPQWQTTCYVGNLTPYTTQNDL 327
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQF 317
+F +G ++ ++ A + FV+
Sbjct: 328 VPLFQNFGYVLETRLQADRGFAFVKM 353
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 32/56 (57%), Gaps = 9/56 (16%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---------PAGKRCGFVQF 317
+PN ++VGGLDP VT+DILK +F G +V VKI G GFV+F
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNGQFTTKGHNYGFVEF 142
>gi|448107329|ref|XP_004205333.1| Piso0_003577 [Millerozyma farinosa CBS 7064]
gi|448110297|ref|XP_004201597.1| Piso0_003577 [Millerozyma farinosa CBS 7064]
gi|359382388|emb|CCE81225.1| Piso0_003577 [Millerozyma farinosa CBS 7064]
gi|359383153|emb|CCE80460.1| Piso0_003577 [Millerozyma farinosa CBS 7064]
Length = 460
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 141/283 (49%), Gaps = 34/283 (12%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSE-----GYGFIE 121
+S D LW+GDL+P +E I I+ GE S K+I++K T+ + GY F+
Sbjct: 70 SSFDNSNQLWMGDLEPSWDEKTIKKIWQSFGESPTSVKIIKDKFTSGNNKARNVGYCFVS 129
Query: 122 FVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP-----------DFTIF 170
F LQ NG Q+P + + +LNWA+ G+ +QD+ D++IF
Sbjct: 130 FPDSNTVASALQK-NGLQIPGSTKTLKLNWAS-GSNSLQQDNAKQGGRFSSKSQNDYSIF 187
Query: 171 VGDLAADVTDYVLQETFRAVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
VGDL DV++ +L E+F Y +K K++ D T SKG+GFV+F Q +++TEM
Sbjct: 188 VGDLGMDVSETLLFESFNRNYPGQIKQVKIMIDPVTKLSKGFGFVKFASPHSQQKALTEM 247
Query: 230 NGVLCSTRPMRIGPAATKKAATGQQYQKATYQN-TQGSQGE-----------NDPNNTTI 277
NG +R +R+G A+ + Q +K+ Y + SQ + DP NTT+
Sbjct: 248 NGYQVGSRSIRVGMASGSNMSINQ--EKSPYPDGVSASQIQIPQYQPPLNHITDPENTTL 305
Query: 278 FVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
V GL + T D L F +G +VH I G ++F R
Sbjct: 306 RVDGLPANFTPDDLALHFINFGNIVHCHISPDHSFGLIKFLVR 348
>gi|15221031|ref|NP_175810.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
gi|4587549|gb|AAD25780.1|AC006577_16 Similar to gb|U55861 RNA binding protein nucleolysin (TIAR) from
Mus musculus and contains several PF|00076 RNA
recognition motif domains. ESTs gb|T21032 and gb|T44127
come from this gene [Arabidopsis thaliana]
gi|13194792|gb|AAK15558.1|AF348587_1 putative oligouridylate binding protein [Arabidopsis thaliana]
gi|13605627|gb|AAK32807.1|AF361639_1 At1g54080/F15I1_16 [Arabidopsis thaliana]
gi|22137190|gb|AAM91440.1| At1g54080/F15I1_16 [Arabidopsis thaliana]
gi|332194924|gb|AEE33045.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
Length = 426
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 150/300 (50%), Gaps = 32/300 (10%)
Query: 35 QQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIF 94
QQH + P V PQ P PS P G P RS++ G++ + E + IF
Sbjct: 29 QQHPSLYHPGVMAPPQMEPLPSGNLPP-GFDPTT----CRSVYAGNIHTQVTEILLQEIF 83
Query: 95 GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATY 154
TG S K+IR +++ YGF+ + A + T NG + Q ++NWA Y
Sbjct: 84 ASTGPIESCKLIRKDKSS----YGFVHYFDRRCASMAIMTLNGRHIFG--QPMKVNWA-Y 136
Query: 155 GAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFV 214
G+R +D F IFVGDL+ +VTD L ++F A ++S A+V+ D+ TGRS+G+GFV
Sbjct: 137 ATGQR-EDTSSHFNIFVGDLSPEVTDAALFDSFSA-FNSCSDARVMWDQKTGRSRGFGFV 194
Query: 215 RFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQG-- 268
F ++ + ++ EMNG S+R +R ATK A G+ K+ + T GS
Sbjct: 195 SFRNQQDAQTAINEMNGKWVSSRQIRCN-WATKGATFGEDKHSSDGKSVVELTNGSSEDG 253
Query: 269 ---------ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQF 317
EN+P TT++VG L P VT L +F G V V++ K GFV++
Sbjct: 254 RELSNEDAPENNPQFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDKGFGFVRY 313
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 79/177 (44%), Gaps = 37/177 (20%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++GDL P + ++ + F +V+ +++T S G+GF+ F + A+ +
Sbjct: 149 NIFVGDLSPEVTDAALFDSFSAFNSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINE 208
Query: 135 FNGTQMPSTEQNFRLNWATYGA--GERRQ---------------------------DDGP 165
NG + S + R NWAT GA GE + ++ P
Sbjct: 209 MNGKWVSSRQ--IRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGRELSNEDAPENNP 266
Query: 166 DFT-IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
FT ++VG+L+ +VT L F + GA V+ + R KG+GFVR+ E
Sbjct: 267 QFTTVYVGNLSPEVTQLDLHRLFYTL-----GAGVIEEVRVQRDKGFGFVRYNTHDE 318
>gi|401887565|gb|EJT51549.1| non-translatable mRNA -binding protein [Trichosporon asahii var.
asahii CBS 2479]
gi|406699766|gb|EKD02963.1| non-translatable mRNA -binding protein [Trichosporon asahii var.
asahii CBS 8904]
Length = 381
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 137/251 (54%), Gaps = 16/251 (6%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERVL 132
L+IG++ P + + +A IF G VS K+I+++ NF G YGF+E+ +AE+ L
Sbjct: 15 LYIGNMSPRVTDQMLAEIFSVAGPVVSAKIIQDR--NFHHGGYNYGFVEYTDMRSAEQAL 72
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
T NG ++ +E R+NWA G G R +D F +FVGDL+ +V D +L + F A ++
Sbjct: 73 TTLNGRKIFDSE--IRVNWAYQGQGNR-EDTQHHFHVFVGDLSPEVNDDILGKAF-AKFA 128
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
S+ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +R +R+ A +K TG
Sbjct: 129 SLSEARVMWDMNSGKSRGYGFLSFRDKADAEQAIATMNGEWLGSRAIRVN-WANQKTQTG 187
Query: 253 QQYQKATYQNTQG------SQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
Q G + NTT++VG L P T L +F YG +V +++
Sbjct: 188 GSRSLGLGQGFNGPLTFEQVAAQTPDYNTTVYVGNLIPYTTQADLIPLFQNYGYIVEIRM 247
Query: 307 PAGKRCGFVQF 317
A + FV+
Sbjct: 248 QADRGFAFVKL 258
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 78/187 (41%), Gaps = 30/187 (16%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + + + F +V+ + + S GYGF+ F A AE+ + T
Sbjct: 106 VFVGDLSPEVNDDILGKAFAKFASLSEARVMWDMNSGKSRGYGFLSFRDKADAEQAIATM 165
Query: 136 NGTQMPSTEQNFRLNWA---TYGAGERRQDDG----------------PDF--TIFVGDL 174
NG + S + R+NWA T G R G PD+ T++VG+L
Sbjct: 166 NGEWLGS--RAIRVNWANQKTQTGGSRSLGLGQGFNGPLTFEQVAAQTPDYNTTVYVGNL 223
Query: 175 AADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLC 234
T L F+ Y + ++ DR G+ FV+ + S+T + L
Sbjct: 224 IPYTTQADLIPLFQN-YGYIVEIRMQADR------GFAFVKLDTHANAALSITSLQNQLV 276
Query: 235 STRPMRI 241
RP++
Sbjct: 277 HGRPIKC 283
>gi|255934068|ref|XP_002558315.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582934|emb|CAP81139.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 496
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 131/264 (49%), Gaps = 23/264 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQ-TNFSEGYGFIEFVSHAAAERVL 132
R+L++G L P + E + IF TG VS K+I +K T YGF+EF AAER +
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNFTTKGHNYGFVEFDDPGAAERAM 150
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A +
Sbjct: 151 QTLNGRRIHQSE--IRVNWAYQSNSTSKEDTSNHFHIFVGDLSNEVNDEVLTQAFSA-FG 207
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SV A+V+ D TGRS+GYGFV F D +E +++ M+G +R +R A K +
Sbjct: 208 SVSEARVMWDMKTGRSRGYGFVAFRDRAEADKALNSMDGEWLGSRAIRCNWANQKGQPSI 267
Query: 253 QQYQKATYQN-------------TQGSQ-----GENDPN-NTTIFVGGLDPSVTDDILKT 293
Q Q T G Q + P TT +VG L P T + L
Sbjct: 268 SQQQALVAMGMTPTTPFGHHHFPTHGIQSYDMVAQQTPQWQTTCYVGNLTPYTTQNDLVP 327
Query: 294 VFGQYGELVHVKIPAGKRCGFVQF 317
+F +G ++ ++ A + FV+
Sbjct: 328 LFQNFGYVLETRLQADRGFAFVKM 351
>gi|388579312|gb|EIM19637.1| hypothetical protein WALSEDRAFT_33897 [Wallemia sebi CBS 633.66]
Length = 423
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 133/254 (52%), Gaps = 19/254 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERVL 132
L++G+L P + E + IF G S K+I ++ NFS G YGF+E+ AAE L
Sbjct: 17 LYVGNLSPRVTEYMLTEIFAVAGHVQSVKIIPDR--NFSHGGLNYGFVEYTDMRAAETAL 74
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT NG ++ TE R+NWA Y +++D F +FVGDL+ +V D +L + F +
Sbjct: 75 QTLNGRKIFDTE--IRVNWA-YQGNNKQEDTTNHFHVFVGDLSPEVNDEILSKAFSG-FK 130
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
S+ A+V+ D TG+S+GYGF+ F ++++ ++++ MNG +R +R+ A +K TG
Sbjct: 131 SISDARVMWDMNTGKSRGYGFLSFREKTDAEQAISTMNGEWLGSRAIRVN-WANQKTQTG 189
Query: 253 QQYQKATYQNTQGSQG---------ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVH 303
G + NTT+++G L P T L +F +G ++
Sbjct: 190 SHRLNDLMPTMNAFNGPLSYEAVFQQTPAYNTTVYIGNLTPYTTQADLVPIFQAFGYIIE 249
Query: 304 VKIPAGKRCGFVQF 317
V++ A + FV+
Sbjct: 250 VRMQADRGFAFVKL 263
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 79/189 (41%), Gaps = 33/189 (17%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + + ++ F +V+ + T S GYGF+ F AE+ + T
Sbjct: 108 VFVGDLSPEVNDEILSKAFSGFKSISDARVMWDMNTGKSRGYGFLSFREKTDAEQAISTM 167
Query: 136 NGTQMPSTEQNFRLNWATYGA--GERRQDD---------GP-------------DFTIFV 171
NG + S + R+NWA G R +D GP + T+++
Sbjct: 168 NGEWLGS--RAIRVNWANQKTQTGSHRLNDLMPTMNAFNGPLSYEAVFQQTPAYNTTVYI 225
Query: 172 GDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
G+L T L F+A + + ++ DR G+ FV+ ++ ++ G
Sbjct: 226 GNLTPYTTQADLVPIFQA-FGYIIEVRMQADR------GFAFVKLDSHENASMAIVQLQG 278
Query: 232 VLCSTRPMR 240
L RP++
Sbjct: 279 TLIQGRPIK 287
>gi|336373915|gb|EGO02253.1| hypothetical protein SERLA73DRAFT_86524 [Serpula lacrymans var.
lacrymans S7.3]
Length = 611
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 148/305 (48%), Gaps = 70/305 (22%)
Query: 85 MEESYIASIFGHTG-EFVSGKV-------IRNKQTNFSEGYGFIEFVSHAAAERVLQTF- 135
M+E Y + G G + V+ KV +Q N + GY F+ F S + A+ VL
Sbjct: 1 MDEEYAKQVCGLMGWDPVNIKVPSPGPDPASGQQAN-NPGYCFLTFPSPSLAQSVLAQVA 59
Query: 136 -NGT----QMPSTEQNFRLNWATYGAGE--RRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
NG+ MP++ + F LNWA+ +Q +++IFVGDLA + ++ L FR
Sbjct: 60 NNGSGQPVTMPNSSKPFVLNWASSVPNTPIAQQQYPREYSIFVGDLAPETSNSDLVAVFR 119
Query: 189 AV---------------YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
+ S K AK++ D TG S+GYGFVRF +E++Q R++ EM+G+
Sbjct: 120 NPVLGLRNDREPKFIRPFLSCKSAKIMLDPVTGVSRGYGFVRFTEEADQQRALIEMHGLY 179
Query: 234 CSTRP-----------MRIG-----PAATKKAATGQQYQ------------------KAT 259
C +RP +++G PA A GQ +A
Sbjct: 180 CLSRPTAQQYSSTNAAIKVGGVTTNPAGATFAPDGQDQNGAPRYMISEESWKHHAQARAI 239
Query: 260 YQNTQGSQGE----NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFV 315
N G GE DP NTT+FVGGL P ++++ L+T F +G++ +VK+P GK CGFV
Sbjct: 240 LGNLIGPNGEQLTSTDPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCGFV 299
Query: 316 QFANR 320
QF +
Sbjct: 300 QFVRK 304
>gi|209735818|gb|ACI68778.1| tRNA selenocysteine-associated protein 1 [Salmo salar]
gi|303668652|gb|ADM16309.1| tRNA selenocysteine-associated protein 1 SECp43 [Salmo salar]
Length = 301
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 109/179 (60%), Gaps = 8/179 (4%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
+ +LW+G+L+P+M+E++I FG GE V S ++IRNK T + GY F+E A AER
Sbjct: 1 MSTLWMGNLEPYMDENFITRAFGTMGELVVSVRIIRNKMTGGAAGYCFVELTDEATAERC 60
Query: 132 LQTFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
L+ NG +P + F+LN AT+G ++ + P +++FVGDL +V D +L E F
Sbjct: 61 LRKVNGKALPGATPPRRFKLNRATFG---KQGESSPLYSLFVGDLTPEVDDGMLYEFFYN 117
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
Y S +G KVV D TG SKG GFV+F D+ Q ++ E G + ++P+R+ AA K
Sbjct: 118 RYPSCRGGKVVLD-GTGNSKGCGFVQFPDQRLQKLALEECQGAVGLGSKPLRLSLAANK 175
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 25/158 (15%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++G+L + + + F + V +++ ++ TG + GY FV DE+ R +
Sbjct: 3 TLWMGNLEPYMDENFITRAFGTMGELVVSVRIIRNKMTGGAAGYCFVELTDEATAERCLR 62
Query: 228 EMNGVLC--STRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
++NG +T P R + +AT+ G QGE+ P ++FVG L P
Sbjct: 63 KVNGKALPGATPPRRF------------KLNRATF----GKQGESSPL-YSLFVGDLTPE 105
Query: 286 VTDDILKTVF-GQY-----GELVHVKIPAGKRCGFVQF 317
V D +L F +Y G++V K CGFVQF
Sbjct: 106 VDDGMLYEFFYNRYPSCRGGKVVLDGTGNSKGCGFVQF 143
>gi|297853192|ref|XP_002894477.1| hypothetical protein ARALYDRAFT_474538 [Arabidopsis lyrata subsp.
lyrata]
gi|297340319|gb|EFH70736.1| hypothetical protein ARALYDRAFT_474538 [Arabidopsis lyrata subsp.
lyrata]
Length = 417
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 147/292 (50%), Gaps = 28/292 (9%)
Query: 44 PVGWTPQPVPPPSQQTQPYG-VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVS 102
P + P + PP + P G + P RS++ G++ + E + IF TG S
Sbjct: 28 PSLYHPGVMAPPQMEPLPSGNLPPGFDPTTCRSVYAGNIHTQVTEILLQEIFASTGPIES 87
Query: 103 GKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD 162
K+IR +++ YGF+ + A + T NG + Q ++NWA Y G+R +D
Sbjct: 88 CKLIRKDKSS----YGFVHYFDRRCASMAIMTLNGRHIFG--QPMKVNWA-YATGQR-ED 139
Query: 163 DGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
F IFVGDL+ +VTD L ++F A ++S A+V+ D+ TGRS+G+GFV F ++ +
Sbjct: 140 TSSHFNIFVGDLSPEVTDAALFDSFSA-FNSCSDARVMWDQKTGRSRGFGFVSFRNQQDA 198
Query: 223 LRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQG---------- 268
++ EMNG S+R +R ATK A G+ K+ + T GS
Sbjct: 199 QTAINEMNGKWLSSRQIRCN-WATKGATFGEDKHSSDGKSVVELTNGSSEDGRELSNEDA 257
Query: 269 -ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGE--LVHVKIPAGKRCGFVQF 317
EN+P TT++VG L P VT L +F G + V++ K GFV++
Sbjct: 258 PENNPQYTTVYVGNLSPEVTQLDLHRLFYTLGAGAIEEVRVQRDKGFGFVRY 309
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 37/177 (20%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++GDL P + ++ + F +V+ +++T S G+GF+ F + A+ +
Sbjct: 145 NIFVGDLSPEVTDAALFDSFSAFNSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINE 204
Query: 135 FNGTQMPSTEQNFRLNWATYGA--GERRQ---------------DDGPDF---------- 167
NG + S + R NWAT GA GE + +DG +
Sbjct: 205 MNGKWLSSRQ--IRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGRELSNEDAPENNP 262
Query: 168 ---TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
T++VG+L+ +VT L F + GA + + R KG+GFVR+ E
Sbjct: 263 QYTTVYVGNLSPEVTQLDLHRLFYTL-----GAGAIEEVRVQRDKGFGFVRYNTHDE 314
>gi|317030432|ref|XP_001392545.2| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus niger CBS 513.88]
Length = 478
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 133/265 (50%), Gaps = 24/265 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGY--GFIEFVSHAAAERV 131
R+L++G L P + E + IF TG VS K+I +K S+GY GF+EF AAER
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERA 150
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A +
Sbjct: 151 MQTLNGRRIHQSE--IRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-F 207
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT 251
SV A+V+ D TGRS+GYGFV F + S+ ++++ M+G +R +R A K +
Sbjct: 208 GSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIRCNWANQKGQPS 267
Query: 252 GQQYQKATYQN-------------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDILK 292
Q Q T G Q + P TT +VG L P T L
Sbjct: 268 ISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQTPQWQTTCYVGNLTPYTTQTDLV 327
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQF 317
+F +G ++ ++ A + F++
Sbjct: 328 PLFQNFGYVIETRLQADRGFAFIKM 352
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 8/55 (14%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI--------PAGKRCGFVQF 317
+PN ++VGGLDP VT+DILK +F G +V VKI G GFV+F
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEF 141
>gi|6996560|emb|CAB75429.1| oligouridylate binding protein [Nicotiana plumbaginifolia]
Length = 406
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 143/285 (50%), Gaps = 25/285 (8%)
Query: 52 VPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQT 111
PP + + P S RS+++G++ P + E + +F TG K+IR ++
Sbjct: 27 APPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFASTGPLEGCKLIRKDKS 86
Query: 112 NFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFV 171
+ YGF+++ +A + T NG + Q ++NWA A +R+D + IFV
Sbjct: 87 S----YGFVDYFDRRSAALAIVTLNGRHL--FGQPIKVNWAY--ASAQREDTSNHYNIFV 138
Query: 172 GDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
GDL+ +VTD L F +VY+S A+V+ D+ TGRS+G+GFV F ++ E ++ ++NG
Sbjct: 139 GDLSPEVTDATLFACF-SVYTSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLNG 197
Query: 232 VLCSTRPMRIGPAATKKAATGQQYQ--KATYQNTQGSQG------------ENDPNNTTI 277
+R +R AA A G+Q K+ + T G+ EN+P TT+
Sbjct: 198 KWLGSRQIRCNWAAKGAGAVGEQNSDAKSVVELTSGTSDDGQEKVVNEDAPENNPQYTTV 257
Query: 278 FVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQFANR 320
+VG L P VT L F G V V+I K GFV++++
Sbjct: 258 YVGNLAPEVTSVDLHRHFHALGAGVIEDVRIQRDKGFGFVRYSSH 302
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 37/197 (18%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++GDL P + ++ + + F +V+ +++T S G+GF+ F + A+ +
Sbjct: 135 NIFVGDLSPEVTDATLFACFSVYTSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAIND 194
Query: 135 FNGTQMPSTEQNFRLNWATYGAG---ERRQD----------------------DGPD--- 166
NG + S + R NWA GAG E+ D D P+
Sbjct: 195 LNGKWLGSRQ--IRCNWAAKGAGAVGEQNSDAKSVVELTSGTSDDGQEKVVNEDAPENNP 252
Query: 167 --FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLR 224
T++VG+LA +VT L F A+ GA V+ D R KG+GFVR+ +E R
Sbjct: 253 QYTTVYVGNLAPEVTSVDLHRHFHAL-----GAGVIEDVRIQRDKGFGFVRYSSHAEAAR 307
Query: 225 SMTEMNGVLCSTRPMRI 241
++ N L +P++
Sbjct: 308 AIQLGNARLLFGKPVKC 324
>gi|358371808|dbj|GAA88414.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus kawachii IFO 4308]
Length = 478
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 133/265 (50%), Gaps = 24/265 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGY--GFIEFVSHAAAERV 131
R+L++G L P + E + IF TG VS K+I +K S+GY GF+EF AAER
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERA 150
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A +
Sbjct: 151 MQTLNGRRIHQSE--IRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-F 207
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT 251
SV A+V+ D TGRS+GYGFV F + S+ ++++ M+G +R +R A K +
Sbjct: 208 GSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIRCNWANQKGQPS 267
Query: 252 GQQYQKATYQN-------------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDILK 292
Q Q T G Q + P TT +VG L P T L
Sbjct: 268 ISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQTPQWQTTCYVGNLTPYTTQTDLV 327
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQF 317
+F +G ++ ++ A + F++
Sbjct: 328 PLFQNFGYVIETRLQADRGFAFIKM 352
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 8/55 (14%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI--------PAGKRCGFVQF 317
+PN ++VGGLDP VT+DILK +F G +V VKI G GFV+F
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEF 141
>gi|427786393|gb|JAA58648.1| Putative trna selenocysteine 1-associated protein 1 [Rhipicephalus
pulchellus]
Length = 225
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 117/214 (54%), Gaps = 27/214 (12%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+LW+GDL+P M+E ++ F GE V K+IR++ T GYGF++F AAER L
Sbjct: 7 TLWMGDLEPTMDEYFVQQAFSMMGENPVHVKIIRDRLTGLPRGYGFLDFGDEEAAERALL 66
Query: 134 TFNGTQMPSTEQ--NFRLNWA--------------------TYGAGERRQ--DDGPDFTI 169
NG +P+ Q FRLN A G G R Q + ++
Sbjct: 67 RCNGKPIPNAMQPKTFRLNHANNSTGGGGGGGGGGYQQQGYANGGGGRPQYGSSSNELSM 126
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
FVGDL+ADV D +L + F Y SV+ AKVV D TG SKG+GFVRF D +E ++ +M
Sbjct: 127 FVGDLSADVDDTLLYQAFSQRYPSVRAAKVVLD-PTGLSKGFGFVRFSDGTEYQEALVDM 185
Query: 230 -NGVLCSTRPMRIGPAATKKAATGQQYQKATYQN 262
+ +L ++P+R+G A ++AA G Q+ Y+N
Sbjct: 186 QHSLLVGSKPIRVGVANPRRAAAGPGGQRVFYRN 219
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 16/168 (9%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++GDL + +Y +Q+ F + + K++ DR TG +GYGF+ FGDE R++
Sbjct: 7 TLWMGDLEPTMDEYFVQQAFSMMGENPVHVKIIRDRLTGLPRGYGFLDFGDEEAAERALL 66
Query: 228 EMNG--VLCSTRP--MRIGPAATKKAATGQQYQKATYQNTQGSQGENDP------NNTTI 277
NG + + +P R+ A G Q + G P N ++
Sbjct: 67 RCNGKPIPNAMQPKTFRLNHANNSTGGGGGGGGGGYQQQGYANGGGGRPQYGSSSNELSM 126
Query: 278 FVGGLDPSVTDDILKTVFGQ-YGELVHVKI---PAG--KRCGFVQFAN 319
FVG L V D +L F Q Y + K+ P G K GFV+F++
Sbjct: 127 FVGDLSADVDDTLLYQAFSQRYPSVRAAKVVLDPTGLSKGFGFVRFSD 174
>gi|432883111|ref|XP_004074210.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Oryzias
latipes]
Length = 305
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 114/199 (57%), Gaps = 11/199 (5%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGE-FVSGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
+ +LW+G+L +M+E +I F GE V+ ++IRNK T + GY F+E A AER
Sbjct: 1 MSTLWMGNLDSYMDEKFITRAFSTMGEQVVNVRIIRNKMTGGAMGYCFVEMSDEATAERC 60
Query: 132 LQTFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
L+ NG +P F+LN AT+G +Q+ GP F++FVGDL +V D +L E F
Sbjct: 61 LRKINGKSLPGANPPTRFKLNRATFG----KQEAGPMFSLFVGDLTPEVDDGMLYEFFYN 116
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAAT-- 246
Y S +G KVV D + G SKG GFV+F DE Q R++ E G + ++P+R+ AA
Sbjct: 117 RYPSCRGGKVVLD-SMGNSKGCGFVQFPDERLQKRALEECQGAMGLGSKPLRLSLAANNL 175
Query: 247 KKAATGQQYQKATYQNTQG 265
+ Q QK T+ ++ G
Sbjct: 176 RNKQPQQSEQKQTWPSSSG 194
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 26/158 (16%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++G+L + + + + F + V +++ ++ TG + GY FV DE+ R +
Sbjct: 3 TLWMGNLDSYMDEKFITRAFSTMGEQVVNVRIIRNKMTGGAMGYCFVEMSDEATAERCLR 62
Query: 228 EMNG--VLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
++NG + + P R +A G+Q + ++FVG L P
Sbjct: 63 KINGKSLPGANPPTRF---KLNRATFGKQEAGPMF---------------SLFVGDLTPE 104
Query: 286 VTDDILKTVF-GQY-----GELVHVKIPAGKRCGFVQF 317
V D +L F +Y G++V + K CGFVQF
Sbjct: 105 VDDGMLYEFFYNRYPSCRGGKVVLDSMGNSKGCGFVQF 142
>gi|30695647|ref|NP_849806.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
gi|332194923|gb|AEE33044.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
Length = 430
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 149/303 (49%), Gaps = 34/303 (11%)
Query: 35 QQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIF 94
QQH + P V PQ P PS P G P RS++ G++ + E + IF
Sbjct: 29 QQHPSLYHPGVMAPPQMEPLPSGNLPP-GFDPTT----CRSVYAGNIHTQVTEILLQEIF 83
Query: 95 GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATY 154
TG S K+IR +++ YGF+ + A + T NG + Q ++NWA Y
Sbjct: 84 ASTGPIESCKLIRKDKSS----YGFVHYFDRRCASMAIMTLNGRHIFG--QPMKVNWA-Y 136
Query: 155 GAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS---VKGAKVVTDRTTGRSKGY 211
G+R +D F IFVGDL+ +VTD L ++F A S + A+V+ D+ TGRS+G+
Sbjct: 137 ATGQR-EDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSSYYRDARVMWDQKTGRSRGF 195
Query: 212 GFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQ 267
GFV F ++ + ++ EMNG S+R +R ATK A G+ K+ + T GS
Sbjct: 196 GFVSFRNQQDAQTAINEMNGKWVSSRQIRCN-WATKGATFGEDKHSSDGKSVVELTNGSS 254
Query: 268 G-----------ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGF 314
EN+P TT++VG L P VT L +F G V V++ K GF
Sbjct: 255 EDGRELSNEDAPENNPQFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDKGFGF 314
Query: 315 VQF 317
V++
Sbjct: 315 VRY 317
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 41/181 (22%)
Query: 75 SLWIGDLQPWMEESYIASIFGH----TGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
++++GDL P + ++ + F + + +V+ +++T S G+GF+ F + A+
Sbjct: 149 NIFVGDLSPEVTDAALFDSFSAFNSCSSYYRDARVMWDQKTGRSRGFGFVSFRNQQDAQT 208
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGA--GERRQ--------------------------- 161
+ NG + S + R NWAT GA GE +
Sbjct: 209 AINEMNGKWVSSRQ--IRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGRELSNEDAP 266
Query: 162 DDGPDFT-IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
++ P FT ++VG+L+ +VT L F + GA V+ + R KG+GFVR+
Sbjct: 267 ENNPQFTTVYVGNLSPEVTQLDLHRLFYTL-----GAGVIEEVRVQRDKGFGFVRYNTHD 321
Query: 221 E 221
E
Sbjct: 322 E 322
>gi|134077058|emb|CAK39931.1| unnamed protein product [Aspergillus niger]
Length = 497
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 135/265 (50%), Gaps = 24/265 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGY--GFIEFVSHAAAERV 131
R+L++G L P + E + IF TG VS K+I +K S+GY GF+EF AAER
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERA 150
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A +
Sbjct: 151 MQTLNGRRIHQSE--IRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-F 207
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK---- 247
SV A+V+ D TGRS+GYGFV F + S+ ++++ M+G +R +R A K
Sbjct: 208 GSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIRCNWANQKGQPS 267
Query: 248 ------KAATGQQYQKATYQN---TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDILK 292
AA G A + T G Q + P TT +VG L P T L
Sbjct: 268 ISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQTPQWQTTCYVGNLTPYTTQTDLV 327
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQF 317
+F +G ++ ++ A + F++
Sbjct: 328 PLFQNFGYVIETRLQADRGFAFIKM 352
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 8/55 (14%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI--------PAGKRCGFVQF 317
+PN ++VGGLDP VT+DILK +F G +V VKI G GFV+F
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEF 141
>gi|291228731|ref|XP_002734335.1| PREDICTED: tRNA selenocysteine associated protein 1-like
[Saccoglossus kowalevskii]
Length = 303
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 109/184 (59%), Gaps = 9/184 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+W+GDL+P+M+E+++ F GE V K+IRNK T +GY F++F S A+ +L+
Sbjct: 4 SVWMGDLEPYMDEAFVIEAFASVGEKVLNVKIIRNKYTRIPQGYCFVDFGSDEIAKAILR 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+NG +P + + F+LN+A YG + P+F++FVG+L +V + L E F Y
Sbjct: 64 KYNGKPLPGSNNSKRFKLNFAAYGQSYQ----SPEFSLFVGELTPEVDNCALHEFFAKRY 119
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKAA 250
+ K A VV D G S+GYGFVRF +E +Q R++ EMN V + +++ A K+
Sbjct: 120 YTCKAANVVLD-PMGHSRGYGFVRFSNEEDQQRALIEMNQVTGLGGKSIKVALATPKRPI 178
Query: 251 TGQQ 254
T Q
Sbjct: 179 TAVQ 182
>gi|209737894|gb|ACI69816.1| tRNA selenocysteine-associated protein 1 SECp43 [Salmo salar]
Length = 271
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/249 (35%), Positives = 137/249 (55%), Gaps = 26/249 (10%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNF-SEGYGFIEFVSHAAAER 130
+ +LW+G+L+P+M+E++I FG GE V S ++IRNK T + GY F+E A AER
Sbjct: 1 MSTLWMGNLEPYMDENFITRAFGTMGELVVSVRIIRNKMTGRGAAGYCFVELTDEATAER 60
Query: 131 VLQTFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
L+ NG +P + F+LN AT+G ++ + P +++FVGDL +V D +L E F
Sbjct: 61 CLRKVNGKALPGATPPRRFKLNRATFG---KQGESSPLYSLFVGDLTPEVDDGMLYEFFY 117
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
Y S +G KVV D TG SKG GFV+F D+ Q ++ E G + ++P+R+ AA K
Sbjct: 118 NRYPSCRGGKVVLD-GTGNSKGCGFVQFPDQRLQKLALEECQGAVGLGSKPLRLSLAANK 176
Query: 248 K----------AATGQQYQKATYQNTQGSQGENDPNNTTIFVGGL-DPSVTDDILKT--V 294
+ G Y+ Y TQ + EN+ + GL DP+ D+L+ +
Sbjct: 177 TRHNQSDNRGWGSHGGGYRHNQYDYTQNTAQENE----AVEEDGLEDPNPELDVLEANRM 232
Query: 295 FGQYGELVH 303
F ++ E ++
Sbjct: 233 FMEHSEELY 241
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 26/159 (16%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGR-SKGYGFVRFGDESEQLRSM 226
T+++G+L + + + F + V +++ ++ TGR + GY FV DE+ R +
Sbjct: 3 TLWMGNLEPYMDENFITRAFGTMGELVVSVRIIRNKMTGRGAAGYCFVELTDEATAERCL 62
Query: 227 TEMNGVLC--STRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDP 284
++NG +T P R + +AT+ G QGE+ P ++FVG L P
Sbjct: 63 RKVNGKALPGATPPRRF------------KLNRATF----GKQGESSPL-YSLFVGDLTP 105
Query: 285 SVTDDILKTVF-GQY-----GELVHVKIPAGKRCGFVQF 317
V D +L F +Y G++V K CGFVQF
Sbjct: 106 EVDDGMLYEFFYNRYPSCRGGKVVLDGTGNSKGCGFVQF 144
>gi|115491713|ref|XP_001210484.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
gi|114197344|gb|EAU39044.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
Length = 478
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 134/265 (50%), Gaps = 24/265 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGY--GFIEFVSHAAAERV 131
R+L++G L P + E + IF TG VS K+I +K S+GY GF+EF AAER
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERA 150
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D +L + F A +
Sbjct: 151 MQTLNGRRIHQSE--IRVNWAYQSNNTNKEDTSNHFHIFVGDLSNEVNDEILLQAFSA-F 207
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT 251
SV A+V+ D TGRS+GYGFV F + S+ ++++ M+G +R +R A K +
Sbjct: 208 GSVSEARVMWDMKTGRSRGYGFVAFRERSDAEKALSSMDGEWLGSRAIRCNWANQKGQPS 267
Query: 252 GQQYQKATYQN-------------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDILK 292
Q Q T G Q + P TT +VG L P + + L
Sbjct: 268 ISQQQAMAAMGMTPTTPFGHHHFPTHGMQSYDMVVQQTPQWQTTCYVGNLTPYTSQNDLV 327
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQF 317
+F +G ++ ++ A + F++
Sbjct: 328 PLFQNFGFVLETRLQADRGFAFIKM 352
>gi|350629665|gb|EHA18038.1| hypothetical protein ASPNIDRAFT_176547 [Aspergillus niger ATCC
1015]
Length = 496
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 136/265 (51%), Gaps = 25/265 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGY--GFIEFVSHAAAERV 131
R+L++G L P + E + IF TG VS K+I +K N S+GY GF+EF AAER
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNFN-SKGYNYGFVEFDDPGAAERA 149
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A +
Sbjct: 150 MQTLNGRRIHQSE--IRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-F 206
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK---- 247
SV A+V+ D TGRS+GYGFV F + S+ ++++ M+G +R +R A K
Sbjct: 207 GSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIRCNWANQKGQPS 266
Query: 248 ------KAATGQQYQKATYQN---TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDILK 292
AA G A + T G Q + P TT +VG L P T L
Sbjct: 267 ISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQTPQWQTTCYVGNLTPYTTQTDLV 326
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQF 317
+F +G ++ ++ A + F++
Sbjct: 327 PLFQNFGYVIETRLQADRGFAFIKM 351
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI-------PAGKRCGFVQF 317
+PN ++VGGLDP VT+DILK +F G +V VKI G GFV+F
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNFNSKGYNYGFVEF 140
>gi|67517823|ref|XP_658695.1| hypothetical protein AN1091.2 [Aspergillus nidulans FGSC A4]
gi|40747053|gb|EAA66209.1| hypothetical protein AN1091.2 [Aspergillus nidulans FGSC A4]
Length = 892
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 133/265 (50%), Gaps = 24/265 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG--YGFIEFVSHAAAERV 131
R+L++G L P + E + IF TG +S K+I +K S+G YGF+EF AAER
Sbjct: 90 RALYVGGLDPRVTEDILKQIFETTGHVISVKIIPDKNQFNSKGANYGFVEFDDPGAAERA 149
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A +
Sbjct: 150 MQTLNGRRIHQSE--IRVNWAYQSNTANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-F 206
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT 251
SV A+V+ D TGRS+GYGFV F + ++ +++T M+G +R +R A K +
Sbjct: 207 GSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALTSMDGEWLGSRAIRCNWANQKGQPS 266
Query: 252 GQQYQKATYQN-------------TQGSQG------ENDPNNTTIFVGGLDPSVTDDILK 292
Q Q T G Q + TT +VG L P T + +
Sbjct: 267 ISQQQAMAAMGMTPTTPFGHHHFPTHGIQSYDMVVQQTPAWQTTCYVGNLTPYTTQNDIV 326
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQF 317
+F +G ++ ++ A + F++
Sbjct: 327 PLFQNFGYVIETRMQADRGFAFIKM 351
>gi|115473341|ref|NP_001060269.1| Os07g0615400 [Oryza sativa Japonica Group]
gi|23237933|dbj|BAC16506.1| putative oligouridylate binding protein [Oryza sativa Japonica
Group]
gi|113611805|dbj|BAF22183.1| Os07g0615400 [Oryza sativa Japonica Group]
gi|215737207|dbj|BAG96136.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767365|dbj|BAG99593.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637457|gb|EEE67589.1| hypothetical protein OsJ_25126 [Oryza sativa Japonica Group]
Length = 427
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 147/283 (51%), Gaps = 29/283 (10%)
Query: 57 QQTQPY---GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF 113
QQ +P + P + RS+++G++ + E+ + +F TG K+IR ++++
Sbjct: 45 QQIEPILTGNLPPGFDTSTCRSVYVGNVHVQVTEALLREVFQSTGLVEGCKLIRKEKSS- 103
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGD 173
YGF+++ +A + T NG Q+ Q R+NWA Y +G+R +D F IFVGD
Sbjct: 104 ---YGFVDYYDRRSAALSILTLNGKQIFG--QLIRVNWA-YASGQR-EDTTDHFNIFVGD 156
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
L+ +VTD L F YSS A+V+ D+ TGRS+GYGFV F ++ + ++ ++NG
Sbjct: 157 LSPEVTDSALFAFFSG-YSSCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQW 215
Query: 234 CSTRPMRIGPAATKKAATGQQ-----YQKATYQNTQGSQG---------ENDPNNTTIFV 279
+R +R ATK A+ G+Q A N G EN+P T++V
Sbjct: 216 LGSRQIRCN-WATKGASNGEQQTSDSKNVADLTNNLTEDGKEKANEDAPENNPQYRTVYV 274
Query: 280 GGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFANR 320
G L VT D+L +F G + V+I GK GFV+++N
Sbjct: 275 GNLAHEVTQDVLHRLFHALGAGAIEEVRIQLGKGFGFVRYSNH 317
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 36/196 (18%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++GDL P + +S + + F +V+ +++T S GYGF+ F + A+ +
Sbjct: 151 NIFVGDLSPEVTDSALFAFFSGYSSCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAIND 210
Query: 135 FNGTQMPSTEQNFRLNWATYGAG------------------------ERRQDDGPD---- 166
NG + S + R NWAT GA E+ +D P+
Sbjct: 211 LNGQWLGSRQ--IRCNWATKGASNGEQQTSDSKNVADLTNNLTEDGKEKANEDAPENNPQ 268
Query: 167 -FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
T++VG+LA +VT VL F A+ GA + + KG+GFVR+ + +E +
Sbjct: 269 YRTVYVGNLAHEVTQDVLHRLFHAL-----GAGAIEEVRIQLGKGFGFVRYSNHAEAALA 323
Query: 226 MTEMNGVLCSTRPMRI 241
+ NG + +P++
Sbjct: 324 IQMGNGRILGGKPIKC 339
>gi|259488599|tpe|CBF88164.1| TPA: nuclear and cytoplasmic polyadenylated RNA-binding protein
pub1 (AFU_orthologue; AFUA_1G12000) [Aspergillus
nidulans FGSC A4]
Length = 477
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 134/265 (50%), Gaps = 25/265 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG--YGFIEFVSHAAAERV 131
R+L++G L P + E + IF TG +S K+I +K N S+G YGF+EF AAER
Sbjct: 90 RALYVGGLDPRVTEDILKQIFETTGHVISVKIIPDKNFN-SKGANYGFVEFDDPGAAERA 148
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A +
Sbjct: 149 MQTLNGRRIHQSE--IRVNWAYQSNTANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-F 205
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT 251
SV A+V+ D TGRS+GYGFV F + ++ +++T M+G +R +R A K +
Sbjct: 206 GSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALTSMDGEWLGSRAIRCNWANQKGQPS 265
Query: 252 GQQYQKATYQN-------------TQGSQG------ENDPNNTTIFVGGLDPSVTDDILK 292
Q Q T G Q + TT +VG L P T + +
Sbjct: 266 ISQQQAMAAMGMTPTTPFGHHHFPTHGIQSYDMVVQQTPAWQTTCYVGNLTPYTTQNDIV 325
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQF 317
+F +G ++ ++ A + F++
Sbjct: 326 PLFQNFGYVIETRMQADRGFAFIKM 350
>gi|169768824|ref|XP_001818882.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus oryzae RIB40]
gi|238498168|ref|XP_002380319.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|83766740|dbj|BAE56880.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220693593|gb|EED49938.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|391874569|gb|EIT83434.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 477
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 133/265 (50%), Gaps = 24/265 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGY--GFIEFVSHAAAERV 131
R+L++G L + E + IF TG VS K+I +K S+GY GF+EF AAER
Sbjct: 90 RALYVGGLDQRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERA 149
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D +LQ+ F A +
Sbjct: 150 MQTLNGRRIHQSE--IRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEILQQAFSA-F 206
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT 251
SV A+V+ D TGRS+GYGFV F D ++ +++ M+G +R +R A K +
Sbjct: 207 GSVSEARVMWDMKTGRSRGYGFVAFRDRADADKALGSMDGEWLGSRAIRCNWANQKGQPS 266
Query: 252 GQQYQKATYQN-------------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDILK 292
Q Q T G Q + P TT +VG L P T + L
Sbjct: 267 ISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLV 326
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQF 317
+F +G ++ ++ A + F++
Sbjct: 327 PLFQNFGYVLETRLQADRGFAFIKM 351
>gi|291228735|ref|XP_002734331.1| PREDICTED: tRNA selenocysteine associated protein 1-like isoform 2
[Saccoglossus kowalevskii]
Length = 334
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 109/178 (61%), Gaps = 5/178 (2%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+LW+GD++P+ +E++I F H+GE + K+++NK T Y F++F AAAERV+
Sbjct: 4 TLWMGDVEPFWDENFIRGAFSHSGEQPTAVKLMKNKLTGGQARYCFVDFRDSAAAERVMS 63
Query: 134 TFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P++ + F+LN+A YG + +F++FVG+L+ +V DY L F Y
Sbjct: 64 ICNGKPVPNSTPPRMFKLNFAVYGMQAPPNFNRKEFSLFVGELSPEVDDYALYNFFSRRY 123
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM-NGVLCSTRPMRIGPAATKK 248
S+KGAKV+ D G S+G+GFVRFG E EQ R++ EM N R +R+ A KK
Sbjct: 124 PSIKGAKVIMD-NAGMSRGFGFVRFGSEEEQQRALNEMQNASGLGGRSLRVSIATPKK 180
>gi|427778057|gb|JAA54480.1| Putative trna selenocysteine 1-associated protein 1 [Rhipicephalus
pulchellus]
Length = 257
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 117/215 (54%), Gaps = 27/215 (12%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+LW+GDL+P M+E ++ F GE V K+IR++ T GYGF++F AAER L
Sbjct: 7 TLWMGDLEPTMDEYFVQQAFSMMGENPVHVKIIRDRLTGLPRGYGFLDFGDEEAAERALL 66
Query: 134 TFNGTQMPSTEQ--NFRLNWA--------------------TYGAGERRQ--DDGPDFTI 169
NG +P+ Q FRLN A G G R Q + ++
Sbjct: 67 RCNGKPIPNAMQPKTFRLNHANNSTGGGGGGGGGGYQQQGYANGGGGRPQYGSSSNELSM 126
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
FVGDL+ADV D +L + F Y SV+ AKVV D TG SKG+GFVRF D +E ++ +M
Sbjct: 127 FVGDLSADVDDTLLYQAFSQRYPSVRAAKVVLD-PTGLSKGFGFVRFSDGTEYQEALVDM 185
Query: 230 -NGVLCSTRPMRIGPAATKKAATGQQYQKATYQNT 263
+ +L ++P+R+G A ++AA G Q+ Q++
Sbjct: 186 QHSLLVGSKPIRVGVANPRRAAAGPGGQRVXXQHS 220
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 16/168 (9%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++GDL + +Y +Q+ F + + K++ DR TG +GYGF+ FGDE R++
Sbjct: 7 TLWMGDLEPTMDEYFVQQAFSMMGENPVHVKIIRDRLTGLPRGYGFLDFGDEEAAERALL 66
Query: 228 EMNG--VLCSTRP--MRIGPAATKKAATGQQYQKATYQNTQGSQGENDP------NNTTI 277
NG + + +P R+ A G Q + G P N ++
Sbjct: 67 RCNGKPIPNAMQPKTFRLNHANNSTGGGGGGGGGGYQQQGYANGGGGRPQYGSSSNELSM 126
Query: 278 FVGGLDPSVTDDILKTVFGQ-YGELVHVKI---PAG--KRCGFVQFAN 319
FVG L V D +L F Q Y + K+ P G K GFV+F++
Sbjct: 127 FVGDLSADVDDTLLYQAFSQRYPSVRAAKVVLDPTGLSKGFGFVRFSD 174
>gi|427778771|gb|JAA54837.1| Putative trna selenocysteine 1-associated protein 1 [Rhipicephalus
pulchellus]
Length = 217
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 115/212 (54%), Gaps = 27/212 (12%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+LW+GDL+P M+E ++ F GE V K+IR++ T GYGF++F AAER L
Sbjct: 7 TLWMGDLEPTMDEYFVQQAFSMMGENPVHVKIIRDRLTGLPRGYGFLDFGDEEAAERALL 66
Query: 134 TFNGTQMPSTEQ--NFRLNWA--------------------TYGAGERRQ--DDGPDFTI 169
NG +P+ Q FRLN A G G R Q + ++
Sbjct: 67 RCNGKPIPNAMQPKTFRLNHANNSTGGGGGGGGGGYQQQGYANGGGGRPQYGSSSNELSM 126
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
FVGDL+ADV D +L + F Y SV+ AKVV D TG SKG+GFVRF D +E ++ +M
Sbjct: 127 FVGDLSADVDDTLLYQAFSQRYPSVRAAKVVLD-PTGLSKGFGFVRFSDGTEYQEALVDM 185
Query: 230 -NGVLCSTRPMRIGPAATKKAATGQQYQKATY 260
+ +L ++P+R+G A ++AA G Q+ Y
Sbjct: 186 QHSLLVGSKPIRVGVANPRRAAAGPGGQRVXY 217
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 16/168 (9%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++GDL + +Y +Q+ F + + K++ DR TG +GYGF+ FGDE R++
Sbjct: 7 TLWMGDLEPTMDEYFVQQAFSMMGENPVHVKIIRDRLTGLPRGYGFLDFGDEEAAERALL 66
Query: 228 EMNG--VLCSTRP--MRIGPAATKKAATGQQYQKATYQNTQGSQGENDP------NNTTI 277
NG + + +P R+ A G Q + G P N ++
Sbjct: 67 RCNGKPIPNAMQPKTFRLNHANNSTGGGGGGGGGGYQQQGYANGGGGRPQYGSSSNELSM 126
Query: 278 FVGGLDPSVTDDILKTVFGQ-YGELVHVKI---PAG--KRCGFVQFAN 319
FVG L V D +L F Q Y + K+ P G K GFV+F++
Sbjct: 127 FVGDLSADVDDTLLYQAFSQRYPSVRAAKVVLDPTGLSKGFGFVRFSD 174
>gi|255550383|ref|XP_002516242.1| nucleolysin tia-1, putative [Ricinus communis]
gi|223544728|gb|EEF46244.1| nucleolysin tia-1, putative [Ricinus communis]
Length = 358
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 155/305 (50%), Gaps = 28/305 (9%)
Query: 29 QSQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEES 88
Q + +QQ P P P + P P P S RS+++G++ P + E
Sbjct: 3 QHHRLKQQAMMPYPHPALVAAPQIEPILSGNLP----PGFDSTTCRSVYVGNIHPQVTEP 58
Query: 89 YIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFR 148
+ +F +TG K+IR ++++ YGF+++ +A + T NG + Q +
Sbjct: 59 LLQEVFSNTGLIEGCKLIRKEKSS----YGFVDYFDRRSAALSIVTLNGRHL--FGQPIK 112
Query: 149 LNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRS 208
+NWA A +R+D F IFVGDL+ +VTD L +F A++ S A+V+ D+ TGRS
Sbjct: 113 VNWAY--ASSQREDTSGHFNIFVGDLSPEVTDATLYASF-ALFPSCSDARVMWDQKTGRS 169
Query: 209 KGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT-------KKAATGQQYQKATYQ 261
+G+GFV F ++ + ++ E+NG +R +R AA K+++ + + T
Sbjct: 170 RGFGFVSFRNQQDAQNAINELNGKWIGSRQIRCNWAAKGTTSNDDKQSSDAKSVVELTNG 229
Query: 262 NTQGSQGEND------PNNTTIFVGGLDPSVTD-DILKTVFGQ-YGELVHVKIPAGKRCG 313
++ SQ +ND P TT++VG L P VT D+ + +G G + V++ K G
Sbjct: 230 TSEDSQEKNDDAPENNPQYTTVYVGNLAPEVTSVDLHRHFYGLGAGTIEDVRVQRDKGFG 289
Query: 314 FVQFA 318
FV+++
Sbjct: 290 FVRYS 294
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 91/216 (42%), Gaps = 36/216 (16%)
Query: 55 PSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFS 114
P + Y + + G ++++GDL P + ++ + + F +V+ +++T S
Sbjct: 110 PIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDATLYASFALFPSCSDARVMWDQKTGRS 169
Query: 115 EGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA------------------ 156
G+GF+ F + A+ + NG + S + R NWA G
Sbjct: 170 RGFGFVSFRNQQDAQNAINELNGKWIGSRQ--IRCNWAAKGTTSNDDKQSSDAKSVVELT 227
Query: 157 ------GERRQDDGPD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTT 205
+ + DD P+ T++VG+LA +VT L F + GA + D
Sbjct: 228 NGTSEDSQEKNDDAPENNPQYTTVYVGNLAPEVTSVDLHRHFYGL-----GAGTIEDVRV 282
Query: 206 GRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
R KG+GFVR+ +E ++ N + +P++
Sbjct: 283 QRDKGFGFVRYSTHAEAALAIQMGNARILYGKPVKC 318
>gi|328709618|ref|XP_003244016.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Acyrthosiphon pisum]
Length = 347
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 113/206 (54%), Gaps = 15/206 (7%)
Query: 53 PPPSQQTQPYGVAPD-------ASSDG--IRSLWIGDLQPWMEESYIASIFGHTGEFVSG 103
PPP+QQT ++P+ AS+ G + S+W+G L+P+M ES+I F GE+
Sbjct: 40 PPPTQQTASTFISPNVPVQQPQASTAGQNVSSVWMGSLEPYMTESFITGAFQKMGEYPKN 99
Query: 104 -KVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD 162
K++RNK T + GY F++F + V+ NG +P T R G +
Sbjct: 100 VKLMRNKNTGETAGYAFVDFYDPVS---VMHKLNGKYIPGTNPPVRFKLNRAGNPGKITT 156
Query: 163 DGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
DF++++G+L++DV DY L +TF Y S++ AKVV D + G SKGYGF+RFG E EQ
Sbjct: 157 SNRDFSVWLGELSSDVDDYQLYKTFACRYQSIRTAKVVLD-SAGYSKGYGFIRFGSEEEQ 215
Query: 223 LRSMTEMNGVL-CSTRPMRIGPAATK 247
+ MNG ++P+++ K
Sbjct: 216 KHCLNNMNGFPGLGSKPIKVSSVIPK 241
>gi|218200015|gb|EEC82442.1| hypothetical protein OsI_26865 [Oryza sativa Indica Group]
Length = 427
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 147/283 (51%), Gaps = 29/283 (10%)
Query: 57 QQTQPY---GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF 113
QQ +P + P + RS+++G++ + E+ + +F TG K+IR ++++
Sbjct: 45 QQIEPILTGNLPPGFDTSTCRSVYVGNVHVQVTEALLREVFQSTGLVEGCKLIRKEKSS- 103
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGD 173
YGF+++ +A + T NG Q+ Q R+NWA Y +G+R +D F IFVGD
Sbjct: 104 ---YGFVDYYDRRSAALAILTLNGKQIFG--QLIRVNWA-YASGQR-EDTTDHFNIFVGD 156
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
L+ +VTD L F YSS A+V+ D+ TGRS+GYGFV F ++ + ++ ++NG
Sbjct: 157 LSPEVTDSALFAFFSG-YSSCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQW 215
Query: 234 CSTRPMRIGPAATKKAATGQQ-----YQKATYQNTQGSQG---------ENDPNNTTIFV 279
+R +R ATK A+ G+Q A N G EN+P T++V
Sbjct: 216 LGSRQIRCN-WATKGASNGEQQTSDSKNVADLTNNLTEDGKEKANEDVPENNPQYRTVYV 274
Query: 280 GGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFANR 320
G L VT D+L +F G + V+I GK GFV++++
Sbjct: 275 GNLAHEVTQDVLHRLFHALGAGAIEEVRIQLGKGFGFVRYSSH 317
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 89/196 (45%), Gaps = 36/196 (18%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++GDL P + +S + + F +V+ +++T S GYGF+ F + A+ +
Sbjct: 151 NIFVGDLSPEVTDSALFAFFSGYSSCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAIND 210
Query: 135 FNGTQMPSTEQNFRLNWATYGAG------------------------ERRQDDGPD---- 166
NG + S + R NWAT GA E+ +D P+
Sbjct: 211 LNGQWLGSRQ--IRCNWATKGASNGEQQTSDSKNVADLTNNLTEDGKEKANEDVPENNPQ 268
Query: 167 -FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
T++VG+LA +VT VL F A+ GA + + KG+GFVR+ +E +
Sbjct: 269 YRTVYVGNLAHEVTQDVLHRLFHAL-----GAGAIEEVRIQLGKGFGFVRYSSHTEAALA 323
Query: 226 MTEMNGVLCSTRPMRI 241
+ NG + +P++
Sbjct: 324 IQMGNGRILGGKPIKC 339
>gi|326524289|dbj|BAK00528.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 429
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 148/299 (49%), Gaps = 31/299 (10%)
Query: 42 PPPVGWTPQPVPPPSQQTQPY---GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTG 98
PPP PP QQ +P + P + RS+++G++ + E+ + +F G
Sbjct: 28 PPPHHHLLGAAPP--QQIEPILTGNLPPGFDTSTCRSVYVGNIHVQVTEALLREVFQSAG 85
Query: 99 EFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGE 158
K+IR ++++ YGF+++ +A + T NG Q+ Q R+NWA Y +G+
Sbjct: 86 SVDGCKLIRKEKSS----YGFVDYYERGSAALAILTLNGKQIFG--QPIRVNWA-YASGQ 138
Query: 159 RRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGD 218
R +D F IFVGDL+ +VTD L F A + A+V+ D+ TGRS+GYGFV F +
Sbjct: 139 R-EDTTDHFHIFVGDLSPEVTDSALFAFFSAYSPNCSDARVMWDQKTGRSRGYGFVSFRN 197
Query: 219 ESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ---------------QYQKATYQNT 263
+ + ++ ++NG R +R ATK A +G+ + + Q +
Sbjct: 198 QQDAQSAINDLNGQWLGNRQIRCN-WATKGANSGEDQLASDSKSIVDVNNNFTENAKQKS 256
Query: 264 QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFANR 320
EN+P T++VG L VT D+L F G + V++ GK GFV+++N
Sbjct: 257 NEDAPENNPLYRTVYVGNLAHEVTQDVLHRFFHALGAGAIEEVRVQHGKGFGFVKYSNH 315
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 91/197 (46%), Gaps = 38/197 (19%)
Query: 76 LWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+++GDL P + +S + + F ++ +V+ +++T S GYGF+ F + A+ +
Sbjct: 148 IFVGDLSPEVTDSALFAFFSAYSPNCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAIND 207
Query: 135 FNGTQMPSTEQNFRLNWATYGAG-------------------------ERRQDDGPD--- 166
NG + + + R NWAT GA ++ +D P+
Sbjct: 208 LNGQWLGNRQ--IRCNWATKGANSGEDQLASDSKSIVDVNNNFTENAKQKSNEDAPENNP 265
Query: 167 --FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLR 224
T++VG+LA +VT VL F A+ GA + + KG+GFV++ + +E
Sbjct: 266 LYRTVYVGNLAHEVTQDVLHRFFHAL-----GAGAIEEVRVQHGKGFGFVKYSNHAETAL 320
Query: 225 SMTEMNGVLCSTRPMRI 241
++ NG + +P++
Sbjct: 321 AIQTGNGRILGGKPVKC 337
>gi|427778835|gb|JAA54869.1| Putative trna selenocysteine 1-associated protein 1 [Rhipicephalus
pulchellus]
Length = 236
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 114/208 (54%), Gaps = 27/208 (12%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+LW+GDL+P M+E ++ F GE V K+IR++ T GYGF++F AAER L
Sbjct: 7 TLWMGDLEPTMDEYFVQQAFSMMGENPVHVKIIRDRLTGLPRGYGFLDFGDEEAAERALL 66
Query: 134 TFNGTQMPSTEQ--NFRLNWA--------------------TYGAGERRQ--DDGPDFTI 169
NG +P+ Q FRLN A G G R Q + ++
Sbjct: 67 RCNGKPIPNAMQPKTFRLNHANNSTGGGGGGGGGGYQQQGYANGGGGRPQYGSSSNELSM 126
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
FVGDL+ADV D +L + F Y SV+ AKVV D TG SKG+GFVRF D +E ++ +M
Sbjct: 127 FVGDLSADVDDTLLYQAFSQRYPSVRAAKVVLD-PTGLSKGFGFVRFSDGTEYQEALVDM 185
Query: 230 -NGVLCSTRPMRIGPAATKKAATGQQYQ 256
+ +L ++P+R+G A ++AA G Y+
Sbjct: 186 QHSLLVGSKPIRVGVANPRRAAAGLLYR 213
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 16/168 (9%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++GDL + +Y +Q+ F + + K++ DR TG +GYGF+ FGDE R++
Sbjct: 7 TLWMGDLEPTMDEYFVQQAFSMMGENPVHVKIIRDRLTGLPRGYGFLDFGDEEAAERALL 66
Query: 228 EMNG--VLCSTRP--MRIGPAATKKAATGQQYQKATYQNTQGSQGENDP------NNTTI 277
NG + + +P R+ A G Q + G P N ++
Sbjct: 67 RCNGKPIPNAMQPKTFRLNHANNSTGGGGGGGGGGYQQQGYANGGGGRPQYGSSSNELSM 126
Query: 278 FVGGLDPSVTDDILKTVFGQ-YGELVHVKI---PAG--KRCGFVQFAN 319
FVG L V D +L F Q Y + K+ P G K GFV+F++
Sbjct: 127 FVGDLSADVDDTLLYQAFSQRYPSVRAAKVVLDPTGLSKGFGFVRFSD 174
>gi|378726298|gb|EHY52757.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 481
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 129/266 (48%), Gaps = 25/266 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSE---GYGFIEFVSHAAAER 130
R+L++G L P + E + IF TG VS K+I +K FS YGF+E+ AAER
Sbjct: 81 RALYVGGLDPRVTEDVLKQIFETTGHVVSVKIIPDKNAQFSSKGFNYGFVEYDDPGAAER 140
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+ T NG ++ E R+NWA ++D F IFVGDL+ +V D VL + F A
Sbjct: 141 AMTTLNGRRVHQAE--IRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA- 197
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
+ SV A+V+ D TGRS+GYGFV F + ++ +++ M+G +R +R+ A K
Sbjct: 198 FGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALASMDGEWLGSRAIRVNWANQKGQP 257
Query: 251 TGQQYQKATYQN-------------TQGSQGENDPNN------TTIFVGGLDPSVTDDIL 291
+ Q Q TQG Q N TT +VG L P T L
Sbjct: 258 SISQQQAMAAMGMSPTTPFGHHHFPTQGIQSYEMVVNQTPAWQTTCYVGNLTPYTTQADL 317
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQF 317
+F +G +V + + + F++
Sbjct: 318 VPLFQNFGYVVETRFQSDRGFAFIKM 343
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGF 314
+PN ++VGGLDP VT+D+LK +F G +V VKI K F
Sbjct: 77 EPNKRALYVGGLDPRVTEDVLKQIFETTGHVVSVKIIPDKNAQF 120
>gi|453087889|gb|EMF15930.1| RRM_1-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 486
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 134/266 (50%), Gaps = 27/266 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF-SEGY--GFIEFVSHAAAER 130
R+L++G L P + E + IF TG S K+I +K NF S+GY GF+E+ AAER
Sbjct: 81 RALYVGGLDPRVTEDVLKQIFETTGHVQSVKIIPDK--NFQSKGYNYGFVEYDDPGAAER 138
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+QT NG ++ +Q R+NWA ++D F IFVGDL+ +V D VL + F A
Sbjct: 139 AMQTLNGRRV--HQQEIRVNWAYQSNTSAKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA- 195
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
+ +V A+V+ D TGRS+GYGF F D E ++++ M+G +R +R A K
Sbjct: 196 FGTVSEARVMWDMKTGRSRGYGFAAFRDRGEAEKALSSMDGEWLGSRAIRCNWANQKGQP 255
Query: 251 TGQQYQKATYQN-------------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDIL 291
+ Q Q TQGSQ + P TT++VG L P T + L
Sbjct: 256 SFSQQQAMAQMGMTPTTPYGHHQFPTQGSQSYEMIVQQTPQWQTTVYVGNLTPYTTQNDL 315
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQF 317
+F +G + + + + F++
Sbjct: 316 VPLFQNFGYVTETRFQSDRGFAFIKM 341
>gi|41581275|emb|CAE47924.1| oligouridylate binding protein, putative [Aspergillus fumigatus]
Length = 485
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 133/265 (50%), Gaps = 25/265 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGY--GFIEFVSHAAAERV 131
R+L++G L P + E + IF TG S K+I +K N S+GY GF+EF AAER
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFN-SKGYNYGFVEFDDPGAAERA 149
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D +L + F A +
Sbjct: 150 MQTLNGRRIHQSE--IRVNWAYQSNSANKEDTSSHFHIFVGDLSNEVNDEILLQAFSA-F 206
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT 251
SV A+V+ D TGRS+GYGFV F + ++ +++ M+G +R +R A K +
Sbjct: 207 GSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALNAMDGEWLGSRAIRCNWANQKGQPS 266
Query: 252 GQQYQKATYQN-------------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDILK 292
Q Q T G Q + P TT +VG L P T + L
Sbjct: 267 ISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLV 326
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQF 317
+F +G ++ ++ A + F++
Sbjct: 327 PLFHNFGYVLETRLQADRGFAFIKM 351
>gi|357121988|ref|XP_003562698.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 427
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 145/287 (50%), Gaps = 29/287 (10%)
Query: 54 PPSQQTQPY---GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQ 110
PP QQ +P + P + RS+++G++ + E+ + +F TG K+IR ++
Sbjct: 39 PPPQQIEPILTGNLPPGFDASTCRSVYVGNIHVHVTEAVLREVFQSTGSVEGCKLIRKEK 98
Query: 111 TNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIF 170
++ YGF+++ +A + NG Q+ Q R+NWA Y +G+R +D F IF
Sbjct: 99 SS----YGFVDYYERGSAALAILQLNGRQIFG--QPIRVNWA-YASGQR-EDTTDHFNIF 150
Query: 171 VGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMN 230
VGDL+A+VTD L F SS A+V+ D+ TGRS+GYGFV F ++ + ++ ++N
Sbjct: 151 VGDLSAEVTDSALFAFFSGYSSSCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLN 210
Query: 231 GVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQG---------------ENDPNNT 275
G R +R ATK A + + Q + ++ G EN+P
Sbjct: 211 GQWLGNRQIRCN-WATKGANSVEDQQTSDSKSIAGVTNNFTEDGKEKANEDAPENNPLYR 269
Query: 276 TIFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFANR 320
T++VG L T D+L F G + V++ GK GFV++++
Sbjct: 270 TVYVGNLAHEATQDVLHRFFYALGAGAIEEVRVQHGKGFGFVKYSSH 316
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 90/198 (45%), Gaps = 38/198 (19%)
Query: 75 SLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++++GDL + +S + + F G++ +V+ +++T S GYGF+ F + A+ +
Sbjct: 148 NIFVGDLSAEVTDSALFAFFSGYSSSCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAIN 207
Query: 134 TFNGTQMPSTEQNFRLNWATYGAG-------------------------ERRQDDGPD-- 166
NG + + + R NWAT GA E+ +D P+
Sbjct: 208 DLNGQWLGNRQ--IRCNWATKGANSVEDQQTSDSKSIAGVTNNFTEDGKEKANEDAPENN 265
Query: 167 ---FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQL 223
T++VG+LA + T VL F A+ GA + + KG+GFV++ +E
Sbjct: 266 PLYRTVYVGNLAHEATQDVLHRFFYAL-----GAGAIEEVRVQHGKGFGFVKYSSHAEAA 320
Query: 224 RSMTEMNGVLCSTRPMRI 241
++ NG + +P++
Sbjct: 321 LAIQMGNGCILGGKPIKC 338
>gi|7493336|pir||T39935 RNA binding protein - fission yeast (Schizosaccharomyces pombe)
(fragment)
Length = 240
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 117/211 (55%), Gaps = 5/211 (2%)
Query: 12 QTSQYQQQHQQWMAYQQQSQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSD 71
+ + + +Q Q + +S + Q Q P+ P + S+ T YG + D +
Sbjct: 34 KDNSFNEQDDQEVDNDYKSNDEPVQSQDPISPNMASNESG---NSENTSNYGSSRDENVY 90
Query: 72 GIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
+LW+G+L+PW+ E++I ++ G+ V K+IRN+ T + GY F+EF S A
Sbjct: 91 QKTTLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASPHEASSA 150
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+ + N +P T F+LNWA+ G E+ +++IFVGDL+ +V ++ + F +
Sbjct: 151 M-SMNNKPIPGTNHLFKLNWASGGGLREKSISKASEYSIFVGDLSPNVNEFDVYSLFASR 209
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
Y+S K AK++TD T S+GYGFVRF DE++
Sbjct: 210 YNSCKSAKIMTDPQTNVSRGYGFVRFTDEND 240
>gi|351695933|gb|EHA98851.1| tRNA selenocysteine 1-associated protein 1 [Heterocephalus glaber]
Length = 262
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 97/152 (63%), Gaps = 7/152 (4%)
Query: 101 VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMP--STEQNFRLNWATYGAGE 158
+S K+IRN+ T GY F+EF A AE+ L NG +P + + F+LN+ATYG
Sbjct: 6 MSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG--- 62
Query: 159 RRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGD 218
++ D+ P++++FVGDL DV D +L E F VY S +G KVV D+ TG SKGYGFV+F D
Sbjct: 63 KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQ-TGISKGYGFVKFTD 121
Query: 219 ESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
E EQ R++TE G + ++P+R+ A K +
Sbjct: 122 ELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 153
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 21/134 (15%)
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
+V K++ +R TG GY FV F D + + + ++NG +P+ P AT
Sbjct: 4 TVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKING-----KPL---PGATPAKRFK 55
Query: 253 QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQY------GELVHVKI 306
Y ATY G Q +N P ++FVG L P V D +L F + G++V +
Sbjct: 56 LNY--ATY----GKQPDNSP-EYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQT 108
Query: 307 PAGKRCGFVQFANR 320
K GFV+F +
Sbjct: 109 GISKGYGFVKFTDE 122
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 62 YGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIE 121
YG PD S + SL++GDL P +++ + F G + QT S+GYGF++
Sbjct: 61 YGKQPDNSPE--YSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGISKGYGFVK 118
Query: 122 FVSHAAAERVLQTFNG 137
F +R L G
Sbjct: 119 FTDELEQKRALTECQG 134
>gi|452845910|gb|EME47843.1| hypothetical protein DOTSEDRAFT_167231 [Dothistroma septosporum
NZE10]
Length = 500
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 138/267 (51%), Gaps = 29/267 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF-SEGY--GFIEFVSHAAAER 130
R+L++G L P + E + IF TG + K+I +K NF S+GY GF+E+ AAER
Sbjct: 83 RALYVGGLDPRVTEDVLKQIFETTGHVQNVKIIPDK--NFQSKGYNYGFVEYDDPGAAER 140
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+QT NG ++ +Q R+NWA ++D F IFVGDL+ +V D VL + F A
Sbjct: 141 AMQTLNGRRV--HQQEIRVNWAYQSNTNTKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA- 197
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG-------P 243
+ +V A+V+ D TGRS+GYGFV + D E ++++ M+G +R +R P
Sbjct: 198 FGTVSEARVMWDMKTGRSRGYGFVAYRDRGEAEKALSSMDGEWLGSRAIRCNWANQKGQP 257
Query: 244 AATKKAATGQQ-------YQKATYQNTQGSQGENDPNN------TTIFVGGLDPSVTDDI 290
+ +++ A Q Y T+ TQGSQ N TT +VG L P T +
Sbjct: 258 SFSQQQAMAQMGMTPTTPYGHHTFP-TQGSQSYEMVVNQTPQWQTTCYVGNLTPYTTQND 316
Query: 291 LKTVFGQYGELVHVKIPAGKRCGFVQF 317
L +F +G + + + + FV+
Sbjct: 317 LVPLFQNFGYVTETRFQSDRGFAFVKM 343
>gi|119495558|ref|XP_001264561.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Neosartorya fischeri NRRL 181]
gi|119412723|gb|EAW22664.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Neosartorya fischeri NRRL 181]
Length = 477
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 133/265 (50%), Gaps = 25/265 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGY--GFIEFVSHAAAERV 131
R+L++G L P + E + IF TG S K+I +K N S+GY GF+EF AAER
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFN-SKGYNYGFVEFDDPGAAERA 149
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D +L + F A +
Sbjct: 150 MQTLNGRRIHQSE--IRVNWAYQSNSTNKEDTSSHFHIFVGDLSNEVNDEILLQAFSA-F 206
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT 251
SV A+V+ D TGRS+GYGFV F + ++ +++ M+G +R +R A K +
Sbjct: 207 GSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALNAMDGEWLGSRAIRCNWANQKGQPS 266
Query: 252 GQQYQKATYQN-------------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDILK 292
Q Q T G Q + P TT +VG L P T + L
Sbjct: 267 ISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLV 326
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQF 317
+F +G ++ ++ A + F++
Sbjct: 327 PLFHNFGYVLETRLQADRGFAFIKM 351
>gi|410927733|ref|XP_003977295.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Takifugu rubripes]
Length = 304
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 116/204 (56%), Gaps = 10/204 (4%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGE-FVSGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
+ +LW+G+L+ +M+E +I F GE VS ++IRNK T + GY F+E A AER
Sbjct: 1 MSTLWMGNLETYMDEKFITRAFSTMGEQVVSVRIIRNKMTGGALGYCFVEMTDEATAERC 60
Query: 132 LQTFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
L+ NG +P S F+LN AT+G +QD G +++FVGDL +V D +L E F
Sbjct: 61 LRKINGKSLPGASPPTRFKLNRATFG----KQDVGQMYSLFVGDLTPEVDDGMLYEFFYN 116
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK- 247
Y S +G KVV D + G SKG GFV+F DE Q R++ E G + ++ +R+ AA
Sbjct: 117 RYPSCRGGKVVLD-SMGNSKGCGFVQFPDERLQKRALDECQGAVGLGSKALRLSLAANNL 175
Query: 248 KAATGQQYQKATYQNTQGSQGEND 271
+ QQ + Q + G +G+ D
Sbjct: 176 RNRQPQQSETRAAQPSSGYRGDYD 199
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 30/160 (18%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++G+L + + + F + V +++ ++ TG + GY FV DE+ R +
Sbjct: 3 TLWMGNLETYMDEKFITRAFSTMGEQVVSVRIIRNKMTGGALGYCFVEMTDEATAERCLR 62
Query: 228 EMNG-VLCSTRP---MRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLD 283
++NG L P ++ A K GQ Y ++FVG L
Sbjct: 63 KINGKSLPGASPPTRFKLNRATFGKQDVGQMY--------------------SLFVGDLT 102
Query: 284 PSVTDDILKTVF-GQY-----GELVHVKIPAGKRCGFVQF 317
P V D +L F +Y G++V + K CGFVQF
Sbjct: 103 PEVDDGMLYEFFYNRYPSCRGGKVVLDSMGNSKGCGFVQF 142
>gi|15231783|ref|NP_188026.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|9294635|dbj|BAB02974.1| RNA binding protein nucleolysin; oligouridylate binding protein
[Arabidopsis thaliana]
gi|22655004|gb|AAM98093.1| AT3g14100/MAG2_5 [Arabidopsis thaliana]
gi|28416511|gb|AAO42786.1| AT3g14100/MAG2_5 [Arabidopsis thaliana]
gi|332641947|gb|AEE75468.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 427
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 147/289 (50%), Gaps = 28/289 (9%)
Query: 47 WTPQPVPPPSQQTQPYG-VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKV 105
+ P + PP + P G + P RS+++G++ + E + IF TG S K+
Sbjct: 31 YHPGVLAPPQLEPVPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEIFTSTGPVESSKL 90
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
IR +++ YGF+ + +A + + NG + Q ++NWA Y G+R +D
Sbjct: 91 IRKDKSS----YGFVHYFDRRSAALAILSLNGRHLFG--QPIKVNWA-YATGQR-EDTSS 142
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
F IFVGDL+ +VTD L ++F +V+SS A+V+ D+ TGRS+G+GFV F ++ + +
Sbjct: 143 HFNIFVGDLSPEVTDATLYQSF-SVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTA 201
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQG-----------EN 270
+ EMNG S+R +R ATK A +G K+ + T GS EN
Sbjct: 202 INEMNGKWLSSRQIRCN-WATKGATSGDDKLSSDGKSVVELTTGSSEDGKETLNEETPEN 260
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQF 317
+ TT++VG L P VT L F G V V++ K GFV++
Sbjct: 261 NSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRDKGFGFVRY 309
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 37/177 (20%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++GDL P + ++ + F +V+ +++T S G+GF+ F + A+ +
Sbjct: 145 NIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINE 204
Query: 135 FNGTQMPSTEQNFRLNWATYGA---GERRQDDGPDF------------------------ 167
NG + S + R NWAT GA ++ DG
Sbjct: 205 MNGKWLSSRQ--IRCNWATKGATSGDDKLSSDGKSVVELTTGSSEDGKETLNEETPENNS 262
Query: 168 ---TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
T++VG+LA +VT L F A+ GA V+ + R KG+GFVR+ E
Sbjct: 263 QFTTVYVGNLAPEVTQLDLHRYFHAL-----GAGVIEEVRVQRDKGFGFVRYNTHPE 314
>gi|21593280|gb|AAM65229.1| oligouridylate binding protein, putative [Arabidopsis thaliana]
Length = 427
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 147/289 (50%), Gaps = 28/289 (9%)
Query: 47 WTPQPVPPPSQQTQPYG-VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKV 105
+ P + PP + P G + P RS+++G++ + E + IF TG S K+
Sbjct: 31 YHPGVLAPPQLEPVPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEIFTSTGPVESSKL 90
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
IR +++ YGF+ + +A + + NG + Q ++NWA Y G+R +D
Sbjct: 91 IRKDKSS----YGFVHYFDRRSAALAILSLNGRHLFG--QPIKVNWA-YATGQR-EDTSS 142
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
F IFVGDL+ +VTD L ++F +V+SS A+V+ D+ TGRS+G+GFV F ++ + +
Sbjct: 143 HFNIFVGDLSPEVTDATLYQSF-SVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTA 201
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQG-----------EN 270
+ EMNG S+R +R ATK A +G K+ + T GS EN
Sbjct: 202 INEMNGKWLSSRQIRCN-WATKGATSGDDKLSSDGKSVVELTTGSSEDGKETLNEETPEN 260
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQF 317
+ TT++VG L P VT L F G V V++ K GFV++
Sbjct: 261 NSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRDKGFGFVRY 309
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 37/177 (20%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++GDL P + ++ + F +V+ +++T S G+GF+ F + A+ +
Sbjct: 145 NIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINE 204
Query: 135 FNGTQMPSTEQNFRLNWATYGA---GERRQDDGPDF------------------------ 167
NG + S + R NWAT GA ++ DG
Sbjct: 205 MNGKWLSSRQ--IRCNWATKGATSGDDKLSSDGKSVVELTTGSSEDGKETLNEETPENNS 262
Query: 168 ---TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
T++VG+LA +VT L F A+ GA V+ + R KG+GFVR+ E
Sbjct: 263 QFTTVYVGNLAPEVTQLDLHRYFHAL-----GAGVIEEVRVQRDKGFGFVRYNTHPE 314
>gi|297829972|ref|XP_002882868.1| hypothetical protein ARALYDRAFT_478823 [Arabidopsis lyrata subsp.
lyrata]
gi|297328708|gb|EFH59127.1| hypothetical protein ARALYDRAFT_478823 [Arabidopsis lyrata subsp.
lyrata]
Length = 430
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 147/289 (50%), Gaps = 28/289 (9%)
Query: 47 WTPQPVPPPSQQTQPYG-VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKV 105
+ P + PP + P G + P RS+++G++ + E + IF TG S K+
Sbjct: 33 YHPGVLAPPQLEPVPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEIFTSTGPVESSKL 92
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
IR +++ YGF+ + +A + + NG + Q ++NWA Y G+R +D
Sbjct: 93 IRKDKSS----YGFVHYFDRRSAALAILSLNGRHL--FGQPIKVNWA-YATGQR-EDTSS 144
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
F IFVGDL+ +VTD L ++F +V+SS A+V+ D+ TGRS+G+GFV F ++ + +
Sbjct: 145 HFNIFVGDLSPEVTDATLYQSF-SVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTA 203
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQG-----------EN 270
+ EMNG S+R +R ATK A +G K+ + T GS EN
Sbjct: 204 INEMNGKWLSSRQIRCN-WATKGATSGDDKLSSDGKSVVELTTGSSEDGKETLNEEAPEN 262
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQF 317
+ TT++VG L P VT L F G V V++ K GFV++
Sbjct: 263 NSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRDKGFGFVRY 311
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 37/177 (20%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++GDL P + ++ + F +V+ +++T S G+GF+ F + A+ +
Sbjct: 147 NIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINE 206
Query: 135 FNGTQMPSTEQNFRLNWATYGA---GERRQDDGPDF------------------------ 167
NG + S + R NWAT GA ++ DG
Sbjct: 207 MNGKWLSSRQ--IRCNWATKGATSGDDKLSSDGKSVVELTTGSSEDGKETLNEEAPENNS 264
Query: 168 ---TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
T++VG+LA +VT L F A+ GA V+ + R KG+GFVR+ E
Sbjct: 265 QFTTVYVGNLAPEVTQLDLHRYFHAL-----GAGVIEEVRVQRDKGFGFVRYNTHPE 316
>gi|449446638|ref|XP_004141078.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 420
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 152/312 (48%), Gaps = 32/312 (10%)
Query: 24 MAYQQQSQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQP 83
M YQ+ QQ Q P + PQ P S + P S RS+++G++ P
Sbjct: 1 MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGN-----LPPGFDSSTCRSVYVGNIHP 55
Query: 84 WMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPST 143
+ E + +F G K+IR ++++ YGF+++ +A + + NG +
Sbjct: 56 QVTEPLLQEVFSSIGPIEGCKLIRKEKSS----YGFVDYFDRRSAAVSIISLNGRNL--F 109
Query: 144 EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDR 203
Q ++NWA A +R+D F IFVGDL+ +VTD L F +VY S A+V+ D+
Sbjct: 110 GQPIKVNWAY--ASSQREDTSGHFNIFVGDLSPEVTDATLFACF-SVYPSCSDARVMWDQ 166
Query: 204 TTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KAT 259
TGRS+GYGFV F +E + ++ ++NG +R +R ATK A +G Q ++
Sbjct: 167 KTGRSRGYGFVAFRNEQDAQSAINDINGKWLGSRQIRCN-WATKGANSGDDKQSSDSRSV 225
Query: 260 YQNTQGSQG-----------ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGE--LVHVKI 306
+ T G+ EN+P TT++VG L P VT L F G + V++
Sbjct: 226 VELTSGTSDGGQEKSNEDAPENNPQYTTVYVGNLAPEVTSVDLHRYFHALGAGTIEDVRV 285
Query: 307 PAGKRCGFVQFA 318
K GFV+++
Sbjct: 286 QRDKGFGFVRYS 297
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 37/202 (18%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
+ G ++++GDL P + ++ + + F +V+ +++T S GYGF+ F + A+
Sbjct: 127 TSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFRNEQDAQ 186
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYGAG-------------------------ERRQDDG 164
+ NG + S + R NWAT GA E+ +D
Sbjct: 187 SAINDINGKWLGSRQ--IRCNWATKGANSGDDKQSSDSRSVVELTSGTSDGGQEKSNEDA 244
Query: 165 PD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDE 219
P+ T++VG+LA +VT L F A+ GA + D R KG+GFVR+
Sbjct: 245 PENNPQYTTVYVGNLAPEVTSVDLHRYFHAL-----GAGTIEDVRVQRDKGFGFVRYSTN 299
Query: 220 SEQLRSMTEMNGVLCSTRPMRI 241
+E ++ N + +P++
Sbjct: 300 AEAALAIQTGNARVVCGKPIKC 321
>gi|398407815|ref|XP_003855373.1| hypothetical protein MYCGRDRAFT_35430 [Zymoseptoria tritici IPO323]
gi|339475257|gb|EGP90349.1| hypothetical protein MYCGRDRAFT_35430 [Zymoseptoria tritici IPO323]
Length = 401
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 149/310 (48%), Gaps = 38/310 (12%)
Query: 41 VPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGI----------RSLWIGDLQPWMEESYI 90
+PPP+ P P+ + + S+ G+ R+L++G L P + E +
Sbjct: 26 MPPPLNIPQNTNPLPTSMNSAFEMGSPTSAGGLVRRAAPEPNKRALYVGGLDPRVTEDVL 85
Query: 91 ASIFGHTGEFVSGKVIRNKQTNF-SEG--YGFIEFVSHAAAERVLQTFNGTQMPSTEQNF 147
IF TG + K+I +K NF S+G YGF+E+ AAER +QT NG ++ +Q
Sbjct: 86 KQIFETTGHVQNVKIIPDK--NFQSKGFNYGFVEYDDPGAAERAMQTLNGRRV--HQQEI 141
Query: 148 RLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGR 207
R+NWA ++D F IFVGDL+ +V D VL + F A + +V A+V+ D TGR
Sbjct: 142 RVNWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGTVSEARVMWDMKTGR 200
Query: 208 SKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN----- 262
S+GYGFV F D ++ ++++ M+G +R +R A K + Q Q
Sbjct: 201 SRGYGFVAFRDRADAEKALSSMDGEWLGSRAIRCNWANQKGQPSFSQQQAMVQMGMTPTT 260
Query: 263 ---------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP 307
TQG+Q + P TT +VG L P T + L +F +G + +
Sbjct: 261 PYGGHHSFPTQGAQSYEMIVQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVTETRFQ 320
Query: 308 AGKRCGFVQF 317
+ + F++
Sbjct: 321 SDRGFAFIKM 330
>gi|121701611|ref|XP_001269070.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus clavatus NRRL 1]
gi|119397213|gb|EAW07644.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus clavatus NRRL 1]
Length = 480
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 130/265 (49%), Gaps = 24/265 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGY--GFIEFVSHAAAERV 131
R+L++G L P + E + IF TG S KVI +K S+GY GF+EF AAER
Sbjct: 92 RALYVGGLDPRVTEDILKQIFETTGHVQSVKVIPDKNKFNSKGYNYGFVEFDDPGAAERA 151
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D +L + F A +
Sbjct: 152 MQTLNGRRIHQSE--IRVNWAYQSNTTSKEDTSGHFHIFVGDLSNEVNDEILMQAFSA-F 208
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT 251
SV A+V+ D TGRS+GYGFV F D + +++ M+G +R +R A K +
Sbjct: 209 GSVSEARVMWDMKTGRSRGYGFVAFRDRGDADKALNSMDGEWLGSRAIRCNWANQKGQPS 268
Query: 252 GQQYQKATYQN-------------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDILK 292
Q Q T G Q + P TT +VG L P + L
Sbjct: 269 ISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTAQNDLV 328
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQF 317
+F +G ++ ++ A + F++
Sbjct: 329 PLFQNFGYVLETRLQADRGFAFIKM 353
>gi|354548091|emb|CCE44827.1| hypothetical protein CPAR2_406300 [Candida parapsilosis]
Length = 445
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 134/261 (51%), Gaps = 18/261 (6%)
Query: 76 LWIGDLQP-WMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+W+GDL P W EES S K++R++ Y F+ F A + LQ
Sbjct: 81 MWMGDLDPSWTEESIYTMWSTLVAPPKSLKIMRDRLNPSKPSYCFVTFGDQEALDWALQR 140
Query: 135 FNGTQMPSTEQNFRLNWAT-------YGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
NG +PST++ F+L+ A+ G G R G +F++FVGDLA DV++ L F
Sbjct: 141 -NGQMVPSTQRRFKLSHASARNNNPNVGGGSGRPSTG-EFSLFVGDLAQDVSEAALYSKF 198
Query: 188 RAVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA- 245
Y + +K A+VV D+ + KG+GFV+F + R++ EM GV+ ++ +R+G AA
Sbjct: 199 NLKYPNEIKSARVVIDQNSKLGKGFGFVKFFHSATMERALKEMQGVMLGSKAIRVGIAAG 258
Query: 246 -----TKKAATGQQYQK-ATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
T A + +K A QN + D NT I + GL + T L+ VF +G
Sbjct: 259 SETTQTNHAQSKPDLKKLAVAQNQPELNADTDERNTNITISGLSSNFTARELELVFLSFG 318
Query: 300 ELVHVKIPAGKRCGFVQFANR 320
+L++ K+ + G+V+F +R
Sbjct: 319 DLIYCKLSRDLQKGYVKFVSR 339
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 17/159 (10%)
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
F +++GDL T+ + + + + K K++ DR Y FV FGD+ E L
Sbjct: 79 FQMWMGDLDPSWTEESIYTMWSTLVAPPKSLKIMRDRLNPSKPSYCFVTFGDQ-EALDWA 137
Query: 227 TEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSV 286
+ NG + P+ ++ + N G G ++FVG L V
Sbjct: 138 LQRNGQMV--------PSTQRRFKLSHASARNNNPNVGGGSGRPSTGEFSLFVGDLAQDV 189
Query: 287 TDDILKTVFG-QY-GELVHVKI------PAGKRCGFVQF 317
++ L + F +Y E+ ++ GK GFV+F
Sbjct: 190 SEAALYSKFNLKYPNEIKSARVVIDQNSKLGKGFGFVKF 228
>gi|440635298|gb|ELR05217.1| hypothetical protein GMDG_01655 [Geomyces destructans 20631-21]
Length = 503
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 131/265 (49%), Gaps = 24/265 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG--YGFIEFVSHAAAERV 131
R+L++G L P + E + IF TG + K+I +K S+G YGF+E+ AAER
Sbjct: 89 RALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNVGASKGFNYGFVEYDDPGAAERA 148
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+QT NG ++ E R+NWA ++D F IFVGDL+ +V D VL + F A +
Sbjct: 149 MQTLNGRRVHQAE--IRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFCA-F 205
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT 251
SV A+V+ D TGRS+GYGFV F + + ++++ M+G +R +R A K +
Sbjct: 206 GSVSEARVMWDMKTGRSRGYGFVAFRERQDAEKALSSMDGEWLGSRAIRCNWANQKGQPS 265
Query: 252 GQQYQKATYQN-------------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDILK 292
Q Q T G Q + P TT++VG L P T + L
Sbjct: 266 ISQQQSMVSTGLTPTTPFGHHHFPTHGVQSYDMIVQQTPQWQTTVYVGNLTPYTTQNDLV 325
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQF 317
+F +G +V + + + FV+
Sbjct: 326 PLFQNFGYVVETRFQSDRGFAFVKM 350
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
+PN ++VGGLDP VT+D+L+ +F G + +VKI K G
Sbjct: 85 EPNKRALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNVG 127
>gi|268531322|ref|XP_002630787.1| Hypothetical protein CBG02484 [Caenorhabditis briggsae]
Length = 403
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 131/254 (51%), Gaps = 13/254 (5%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
SD R+L++G+L P + E +IA++F G KVI + ++ Y F+EF H A
Sbjct: 38 SDEPRTLYVGNLDPSVSEDFIATLFNQIGSVTKTKVIHDGA---NDPYAFVEFSDHGQAS 94
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATY-GAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
+ LQT N + E ++NWA G + D F +FVGDL+++V + L+E F
Sbjct: 95 QALQTMNKRLLHDRE--MKVNWAVEPGQQPSKIDTTRHFHVFVGDLSSEVDNQKLREAF- 151
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ V AKV+ D T +SKGYGFV + E R++ +MNG R +R A K
Sbjct: 152 IPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK- 210
Query: 249 AATGQQYQKATYQNTQGSQGENDP--NNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
G Q + + Y + N +NT+++VG + ++T+D ++ F YG + V+I
Sbjct: 211 --PGDQEKPSNYNEKSYDEVYNQTSGDNTSVYVGNI-ANLTEDEIRQAFASYGRISEVRI 267
Query: 307 PAGKRCGFVQFANR 320
+ FV+F N+
Sbjct: 268 FKMQGYAFVKFENK 281
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 91/190 (47%), Gaps = 25/190 (13%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL ++ + F G+ KVIR+ T S+GYGF+ + AER ++
Sbjct: 133 VFVGDLSSEVDNQKLREAFIPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 192
Query: 136 NGTQMPSTEQNFRLNWATYGAGERR---------------QDDGPDFTIFVGDLAADVTD 180
NG + + R NWAT G++ Q G + +++VG++ A++T+
Sbjct: 193 NGQWL--GRRTIRTNWATRKPGDQEKPSNYNEKSYDEVYNQTSGDNTSVYVGNI-ANLTE 249
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
+++ F A Y + ++ + +GY FV+F +++ +++TEMN + +R
Sbjct: 250 DEIRQAF-ASYGRISEVRIF------KMQGYAFVKFENKNAAAKAITEMNNQDVGGQMVR 302
Query: 241 IGPAATKKAA 250
T AA
Sbjct: 303 CSWGKTGDAA 312
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 268 GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP---AGKRCGFVQFAN 319
G ++P T++VG LDPSV++D + T+F Q G + K+ A FV+F++
Sbjct: 37 GSDEP--RTLYVGNLDPSVSEDFIATLFNQIGSVTKTKVIHDGANDPYAFVEFSD 89
>gi|406861752|gb|EKD14805.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 495
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 143/298 (47%), Gaps = 37/298 (12%)
Query: 53 PPPSQQTQPYG-----VAPDASSDGIR---------SLWIGDLQPWMEESYIASIFGHTG 98
P P+ T P G ++PD++ +R +L++G L P + E + IF TG
Sbjct: 54 PIPTAVTSPMGENGGMMSPDSAGGFVRRAAPEPNKRALYVGGLDPRVTEDVLRQIFETTG 113
Query: 99 EFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGE 158
+ K+I +K + YGF+E+ AAAER +QT NG ++ E R+NWA
Sbjct: 114 HVQNVKIIPDKNSK-GFNYGFVEYDDPAAAERAMQTLNGRRVHQAE--IRVNWAYQSNTS 170
Query: 159 RRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGD 218
++D F IFVGDL+ +V D VL + F A + SV A+V+ D TGRS+GYGFV F +
Sbjct: 171 NKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFRE 229
Query: 219 ESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN-------------TQG 265
+ ++++ M+G +R +R A K + Q Q + T G
Sbjct: 230 RQDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMSAMGMTSTTPFGHHHFPTHG 289
Query: 266 SQG------ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
Q + TT++VG L P T + L +F +G +V + A + FV+
Sbjct: 290 VQSYDMIVQQTPAWQTTVYVGNLTPYTTQNDLIPLFQNFGYVVETRFQADRGFAFVKM 347
>gi|345571041|gb|EGX53856.1| hypothetical protein AOL_s00004g515 [Arthrobotrys oligospora ATCC
24927]
Length = 496
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 136/263 (51%), Gaps = 23/263 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G L P + + + IF TG VS K+I +K YGF+E+ AAER +Q
Sbjct: 78 RALYVGGLDPRVTDDILRQIFETTGHVVSVKIIPDKNAK-GFNYGFVEYDDPGAAERAMQ 136
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ +E R+NWA + ++D F IFVGDL+ +V D +LQ+ F + +
Sbjct: 137 TLNGRRVHQSE--IRVNWAYQSSQAAKEDTSHHFHIFVGDLSNEVNDELLQQAF-TTFGT 193
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK-KAATG 252
+ A+V+ D TGRS+GYGFV + + S+ ++++ M+G +R +R A K + +
Sbjct: 194 ISEARVMWDMKTGRSRGYGFVAYRERSDAEKALSAMDGEWLGSRAIRCNWANQKGQPSIS 253
Query: 253 QQYQKA------------TYQNTQGSQG-----ENDPN-NTTIFVGGLDPSVTDDILKTV 294
QQ Q A + T G Q + P TT++VG L P T + L +
Sbjct: 254 QQSQMAQMGMTPTTPFGHHHFPTHGIQSYDMIVQQTPQWQTTVYVGNLTPYTTQNDLLPL 313
Query: 295 FGQYGELVHVKIPAGKRCGFVQF 317
F +G +V + A + F++
Sbjct: 314 FQNFGYIVETRFQADRGFAFIKM 336
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC-----GFVQF 317
+PN ++VGGLDP VTDDIL+ +F G +V VKI K GFV++
Sbjct: 74 EPNKRALYVGGLDPRVTDDILRQIFETTGHVVSVKIIPDKNAKGFNYGFVEY 125
>gi|327299776|ref|XP_003234581.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton rubrum CBS 118892]
gi|326463475|gb|EGD88928.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton rubrum CBS 118892]
Length = 507
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 133/266 (50%), Gaps = 27/266 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF-SEG--YGFIEFVSHAAAER 130
R+L++G L P + E + IF TG S K+I +K NF S+G YGFIE+ AAER
Sbjct: 102 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDK--NFQSKGLNYGFIEYDDPGAAER 159
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A
Sbjct: 160 AMQTLNGRRVHQSE--IRVNWAYQSNTASKEDTSSHFHIFVGDLSNEVNDEVLLQAFSAC 217
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
SV A+V+ D TGRS+GYGFV F + ++ ++++ M+G +R +R A K
Sbjct: 218 -GSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQP 276
Query: 251 TGQQYQKATYQN-------------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDIL 291
+ Q Q T G Q + P TT +VG L P T + L
Sbjct: 277 SISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDL 336
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQF 317
+F +G +V + A + FV+
Sbjct: 337 IPLFQNFGYVVETRFQADRGFAFVKM 362
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 7/54 (12%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI-------PAGKRCGFVQF 317
+PN ++VGGLDP VT+DILK +F G + VKI G GF+++
Sbjct: 98 EPNKRALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFQSKGLNYGFIEY 151
>gi|296423176|ref|XP_002841131.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637365|emb|CAZ85322.1| unnamed protein product [Tuber melanosporum]
Length = 498
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 144/297 (48%), Gaps = 36/297 (12%)
Query: 53 PPPSQQTQPY---GVAPDASSDGI----------RSLWIGDLQPWMEESYIASIFGHTGE 99
P P+ T P GV S+ G R+L++G L P + E + IF TG
Sbjct: 52 PIPTAITSPMSVSGVTSPTSAGGFVRRAAPEPNKRALYVGGLDPRVTEEILKQIFETTGH 111
Query: 100 FVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGER 159
+ K+I +K + YGFIE+ AAER +QT NG ++ E R+NWA
Sbjct: 112 VQNVKIIPDKNSK-GYNYGFIEYDDPGAAERAMQTLNGRRIHQAE--IRVNWAYQSNQSS 168
Query: 160 RQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDE 219
++D F IFVGDL+ +V D VL + F + + SV A+V+ D TGRS+GYGFV F D
Sbjct: 169 KEDTTNHFHIFVGDLSNEVNDEVLMQAF-STFGSVSEARVMWDMKTGRSRGYGFVAFRDR 227
Query: 220 SEQLRSMTEMNGVLCSTRPMRIG-------PAATKKAATGQQYQKAT----YQN--TQGS 266
++ ++++ M+G +R +R P+ +++AA T + N T G
Sbjct: 228 ADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQAAMAAMGMTPTTPYGHHNFPTHGV 287
Query: 267 QG-----ENDPN-NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
Q + P TT +VG L P T + L +F +G +V + A + FV+
Sbjct: 288 QSYDMIVQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRFQADRGFAFVKM 344
>gi|326480772|gb|EGE04782.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton equinum CBS 127.97]
Length = 507
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 133/266 (50%), Gaps = 27/266 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF-SEG--YGFIEFVSHAAAER 130
R+L++G L P + E + IF TG S K+I +K NF S+G YGFIE+ AAER
Sbjct: 102 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDK--NFQSKGLNYGFIEYDDPGAAER 159
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A
Sbjct: 160 AMQTLNGRRVHQSE--IRVNWAYQSNTASKEDTSSHFHIFVGDLSNEVNDEVLLQAFSAC 217
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
SV A+V+ D TGRS+GYGFV F + ++ ++++ M+G +R +R A K
Sbjct: 218 -GSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQP 276
Query: 251 TGQQYQKATYQN-------------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDIL 291
+ Q Q T G Q + P TT +VG L P T + L
Sbjct: 277 SISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDL 336
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQF 317
+F +G +V + A + FV+
Sbjct: 337 IPLFQNFGYVVETRFQADRGFAFVKM 362
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 7/54 (12%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI-------PAGKRCGFVQF 317
+PN ++VGGLDP VT+DILK +F G + VKI G GF+++
Sbjct: 98 EPNKRALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFQSKGLNYGFIEY 151
>gi|225429862|ref|XP_002283326.1| PREDICTED: nucleolysin TIAR [Vitis vinifera]
Length = 436
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 138/269 (51%), Gaps = 27/269 (10%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P S RS+++G++ + E +A +F G K+IR +++ YGF++++
Sbjct: 50 PGFDSSSCRSVYVGNIHVNVTEKLLAEVFQSAGPLAGCKLIRKDKSS----YGFVDYLDR 105
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A+A + T +G Q+ Q ++NWA Y +G+R +D F IFVGDL+ +VTD L
Sbjct: 106 ASASLAIMTLHGRQVYG--QALKVNWA-YASGQR-EDTSGHFNIFVGDLSPEVTDATLYA 161
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F +V++S A+V+ D TGRSKGYGFV F ++ + ++ +++G R +R A
Sbjct: 162 CF-SVFASCSDARVMWDHKTGRSKGYGFVSFRNQQDAQSAINDLSGKWLGNRQIRCN-WA 219
Query: 246 TKKAATGQQYQKATYQN--------TQGSQG-------ENDPNNTTIFVGGLDPSVTDDI 290
TK A + Q QN + GSQ EN+P TT++VG L VT
Sbjct: 220 TKGAGFNEDKQVNENQNAVVLTNGSSDGSQENTNEEAPENNPAYTTVYVGNLSHEVTQAE 279
Query: 291 LKTVFGQYGELV--HVKIPAGKRCGFVQF 317
L F G V V+I K GFV++
Sbjct: 280 LHCQFHALGAGVIEEVRIQRDKGFGFVRY 308
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 90/202 (44%), Gaps = 37/202 (18%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
+ G ++++GDL P + ++ + + F +V+ + +T S+GYGF+ F + A+
Sbjct: 139 TSGHFNIFVGDLSPEVTDATLYACFSVFASCSDARVMWDHKTGRSKGYGFVSFRNQQDAQ 198
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYGAG-------------------------ERRQDDG 164
+ +G + + + R NWAT GAG E ++
Sbjct: 199 SAINDLSGKWLGNRQ--IRCNWATKGAGFNEDKQVNENQNAVVLTNGSSDGSQENTNEEA 256
Query: 165 PD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDE 219
P+ T++VG+L+ +VT L F A+ GA V+ + R KG+GFVR+
Sbjct: 257 PENNPAYTTVYVGNLSHEVTQAELHCQFHAL-----GAGVIEEVRIQRDKGFGFVRYHTH 311
Query: 220 SEQLRSMTEMNGVLCSTRPMRI 241
E ++ NG + + M+
Sbjct: 312 EEAALAIQMANGRIVRGKSMKC 333
>gi|357466551|ref|XP_003603560.1| RNA-binding protein [Medicago truncatula]
gi|355492608|gb|AES73811.1| RNA-binding protein [Medicago truncatula]
Length = 414
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 133/269 (49%), Gaps = 26/269 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P + RS+++G++ + + +A +F G K+IR ++++ YGF+++
Sbjct: 26 PGFDASACRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKEKSS----YGFVDYHDR 81
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A+A + T +G Q+ Q ++NWA A R+D F +FVGDL+ +VTD L
Sbjct: 82 ASAALAIMTLHGRQL--YGQALKVNWAY--ANSSREDTSGHFNVFVGDLSPEVTDATLFA 137
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F +VY++ A+V+ D TGRSKGYGFV F D + ++ +M G R +R A
Sbjct: 138 CF-SVYTTCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIRCNWAT 196
Query: 246 TKKAATGQQYQKATYQN----TQGSQG-----------ENDPNNTTIFVGGLDPSVTDDI 290
+ + + QN T GS EN+P+ TT++VG L VT
Sbjct: 197 KGAGGSSNEEKINDSQNAVVLTNGSSDGGQDNSNEDAPENNPSYTTVYVGNLPHDVTQAE 256
Query: 291 LKTVFGQYGE--LVHVKIPAGKRCGFVQF 317
L F G L V++ +GK GFV++
Sbjct: 257 LHCQFHALGAGVLEEVRVQSGKGFGFVRY 285
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 43/202 (21%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
+ G ++++GDL P + ++ + + F +V+ + +T S+GYGF+ F H A+
Sbjct: 115 TSGHFNVFVGDLSPEVTDATLFACFSVYTTCSDARVMWDHKTGRSKGYGFVSFRDHQDAQ 174
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYGAG--------------------------ERRQDD 163
+ G + + + R NWAT GAG + +D
Sbjct: 175 SAINDMTGKWLGNRQ--IRCNWATKGAGGSSNEEKINDSQNAVVLTNGSSDGGQDNSNED 232
Query: 164 GPD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGD 218
P+ T++VG+L DVT L F A+ GA V+ + KG+GFVR+
Sbjct: 233 APENNPSYTTVYVGNLPHDVTQAELHCQFHAL-----GAGVLEEVRVQSGKGFGFVRYNT 287
Query: 219 ESEQLRSMTEMNGVLCSTRPMR 240
E ++ NG RP+R
Sbjct: 288 HEEAAMAIQMANG-----RPVR 304
>gi|238883643|gb|EEQ47281.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 452
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 144/261 (55%), Gaps = 21/261 (8%)
Query: 76 LWIGDLQP-WMEESYIASIFGHTGEFVSG----KVIRNKQTNFSEGYGFIEFVSHAAAER 130
+W+GDL P W EES I +++ + VS K++R++ Y F+ F + +
Sbjct: 85 MWMGDLDPQWTEES-IDNLWT---KLVSKPHHVKIMRDRLQPSKPSYCFVTFRDQESIDL 140
Query: 131 VLQTFNGTQMPSTEQNFRLNWA---TYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
+Q NG ++P + + F+LN++ + G+ +R + +++IF+GDLA +V+D L F
Sbjct: 141 AIQR-NGQKVPDSNRVFKLNYSGRNSTGSHDRSTNSSNEYSIFIGDLAPEVSDAALYNKF 199
Query: 188 RAVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA- 245
Y + +K AKV+TD +T +SKG+GFV+F R++ EM G ++ +R+G AA
Sbjct: 200 NMKYPNQIKQAKVITDSSTRKSKGFGFVKFHSPDIMNRALKEMQGYNIGSKAIRVGLAAG 259
Query: 246 -----TKKAATGQQYQKATYQNTQGSQGE-NDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
+ K T + + +Q + + DPNNT+ +GGL +T+ L+ F +G
Sbjct: 260 SHVDTSFKPVTKLDHHRVPVPQSQPALNQFTDPNNTSFTIGGLSGRITESELEQHFIGFG 319
Query: 300 ELVHVKIPAGKRCGFVQFANR 320
+LV+ ++ + G+++F +R
Sbjct: 320 DLVYCRVSKDYQTGYIKFYSR 340
>gi|296081803|emb|CBI20808.3| unnamed protein product [Vitis vinifera]
Length = 397
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 138/269 (51%), Gaps = 27/269 (10%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P S RS+++G++ + E +A +F G K+IR +++ YGF++++
Sbjct: 11 PGFDSSSCRSVYVGNIHVNVTEKLLAEVFQSAGPLAGCKLIRKDKSS----YGFVDYLDR 66
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A+A + T +G Q+ Q ++NWA Y +G+R +D F IFVGDL+ +VTD L
Sbjct: 67 ASASLAIMTLHGRQVYG--QALKVNWA-YASGQR-EDTSGHFNIFVGDLSPEVTDATLYA 122
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F +V++S A+V+ D TGRSKGYGFV F ++ + ++ +++G R +R A
Sbjct: 123 CF-SVFASCSDARVMWDHKTGRSKGYGFVSFRNQQDAQSAINDLSGKWLGNRQIRCN-WA 180
Query: 246 TKKAATGQQYQKATYQN--------TQGSQG-------ENDPNNTTIFVGGLDPSVTDDI 290
TK A + Q QN + GSQ EN+P TT++VG L VT
Sbjct: 181 TKGAGFNEDKQVNENQNAVVLTNGSSDGSQENTNEEAPENNPAYTTVYVGNLSHEVTQAE 240
Query: 291 LKTVFGQYGELV--HVKIPAGKRCGFVQF 317
L F G V V+I K GFV++
Sbjct: 241 LHCQFHALGAGVIEEVRIQRDKGFGFVRY 269
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 90/202 (44%), Gaps = 37/202 (18%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
+ G ++++GDL P + ++ + + F +V+ + +T S+GYGF+ F + A+
Sbjct: 100 TSGHFNIFVGDLSPEVTDATLYACFSVFASCSDARVMWDHKTGRSKGYGFVSFRNQQDAQ 159
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYGAG-------------------------ERRQDDG 164
+ +G + + + R NWAT GAG E ++
Sbjct: 160 SAINDLSGKWLGNRQ--IRCNWATKGAGFNEDKQVNENQNAVVLTNGSSDGSQENTNEEA 217
Query: 165 PD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDE 219
P+ T++VG+L+ +VT L F A+ GA V+ + R KG+GFVR+
Sbjct: 218 PENNPAYTTVYVGNLSHEVTQAELHCQFHAL-----GAGVIEEVRIQRDKGFGFVRYHTH 272
Query: 220 SEQLRSMTEMNGVLCSTRPMRI 241
E ++ NG + + M+
Sbjct: 273 EEAALAIQMANGRIVRGKSMKC 294
>gi|357466549|ref|XP_003603559.1| RNA-binding protein [Medicago truncatula]
gi|355492607|gb|AES73810.1| RNA-binding protein [Medicago truncatula]
Length = 440
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 133/269 (49%), Gaps = 26/269 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P + RS+++G++ + + +A +F G K+IR ++++ YGF+++
Sbjct: 52 PGFDASACRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKEKSS----YGFVDYHDR 107
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A+A + T +G Q+ Q ++NWA A R+D F +FVGDL+ +VTD L
Sbjct: 108 ASAALAIMTLHGRQL--YGQALKVNWAY--ANSSREDTSGHFNVFVGDLSPEVTDATLFA 163
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F +VY++ A+V+ D TGRSKGYGFV F D + ++ +M G R +R A
Sbjct: 164 CF-SVYTTCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIRCNWAT 222
Query: 246 TKKAATGQQYQKATYQN----TQGSQG-----------ENDPNNTTIFVGGLDPSVTDDI 290
+ + + QN T GS EN+P+ TT++VG L VT
Sbjct: 223 KGAGGSSNEEKINDSQNAVVLTNGSSDGGQDNSNEDAPENNPSYTTVYVGNLPHDVTQAE 282
Query: 291 LKTVFGQYGE--LVHVKIPAGKRCGFVQF 317
L F G L V++ +GK GFV++
Sbjct: 283 LHCQFHALGAGVLEEVRVQSGKGFGFVRY 311
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 43/202 (21%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
+ G ++++GDL P + ++ + + F +V+ + +T S+GYGF+ F H A+
Sbjct: 141 TSGHFNVFVGDLSPEVTDATLFACFSVYTTCSDARVMWDHKTGRSKGYGFVSFRDHQDAQ 200
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYGAG--------------------------ERRQDD 163
+ G + + + R NWAT GAG + +D
Sbjct: 201 SAINDMTGKWLGNRQ--IRCNWATKGAGGSSNEEKINDSQNAVVLTNGSSDGGQDNSNED 258
Query: 164 GPD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGD 218
P+ T++VG+L DVT L F A+ GA V+ + KG+GFVR+
Sbjct: 259 APENNPSYTTVYVGNLPHDVTQAELHCQFHAL-----GAGVLEEVRVQSGKGFGFVRYNT 313
Query: 219 ESEQLRSMTEMNGVLCSTRPMR 240
E ++ NG RP+R
Sbjct: 314 HEEAAMAIQMANG-----RPVR 330
>gi|68485797|ref|XP_713179.1| hypothetical protein CaO19.9432 [Candida albicans SC5314]
gi|68485890|ref|XP_713133.1| hypothetical protein CaO19.1876 [Candida albicans SC5314]
gi|46434612|gb|EAK94016.1| hypothetical protein CaO19.1876 [Candida albicans SC5314]
gi|46434659|gb|EAK94062.1| hypothetical protein CaO19.9432 [Candida albicans SC5314]
Length = 452
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 144/261 (55%), Gaps = 21/261 (8%)
Query: 76 LWIGDLQP-WMEESYIASIFGHTGEFVSG----KVIRNKQTNFSEGYGFIEFVSHAAAER 130
+W+GDL P W EES I +++ + VS K++R++ Y F+ F + +
Sbjct: 85 MWMGDLDPQWTEES-IDNLWT---KLVSKPHHVKIMRDRLQPSKPSYCFVTFRDQESIDL 140
Query: 131 VLQTFNGTQMPSTEQNFRLNWA---TYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
+Q NG ++P + + F+LN++ + G+ +R + +++IF+GDLA +V+D L F
Sbjct: 141 AIQR-NGQKVPDSNRVFKLNYSGRNSTGSHDRSTNSSNEYSIFIGDLAPEVSDAALYNKF 199
Query: 188 RAVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA- 245
Y + +K AKV+TD +T +SKG+GFV+F R++ EM G ++ +R+G AA
Sbjct: 200 NMKYPNQIKQAKVITDSSTRKSKGFGFVKFHSPDIMNRALKEMQGYNIGSKAIRVGLAAG 259
Query: 246 -----TKKAATGQQYQKATYQNTQGSQGE-NDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
+ K T + + +Q + + DPNNT+ +GGL +T+ L+ F +G
Sbjct: 260 SHVDTSFKPVTKLDHHRVPVPQSQPALNQFTDPNNTSFTIGGLSGRITESELEQHFIGFG 319
Query: 300 ELVHVKIPAGKRCGFVQFANR 320
+LV+ ++ + G+++F +R
Sbjct: 320 DLVYCRVSKDYQTGYIKFYSR 340
>gi|170055835|ref|XP_001863758.1| nucleolysin tia-1 [Culex quinquefasciatus]
gi|167875726|gb|EDS39109.1| nucleolysin tia-1 [Culex quinquefasciatus]
Length = 456
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 128/251 (50%), Gaps = 10/251 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++FG G S K+IR S+ Y FIE+ SH +A+ L
Sbjct: 8 KTLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREAS---SDPYAFIEYASHQSAQTALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N E ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRLFLKKE--IKVNWATSPGNQPKTDTSQHHHIFVGDLSPEIETETLREAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ ++V D T +SKGY FV F ++E ++ MNG +R +R + K A +
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQMMNGQWLGSRSIRTNWSTRKPPAPRE 181
Query: 254 QYQKATYQNTQGSQ---GENDPNNTTIFVGGLDP-SVTDDILKTVFGQYGELVHVKIPAG 309
+ T G + P NTT++ GG P +++D+++KT FGQ+G + V++
Sbjct: 182 NTKGIKSGKTPGFEEIYNNTGPTNTTVYCGGFPPNTISDNLIKTHFGQFGSIHDVRVFKD 241
Query: 310 KRCGFVQFANR 320
K F++F ++
Sbjct: 242 KGYAFIKFISK 252
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 27/183 (14%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + F GE + +++R+ QT S+GY F+ F
Sbjct: 85 GNQPKTDTSQHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 144
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATY------------------GAGERRQDDG 164
V A AE +Q NG + S ++ R NW+T G E + G
Sbjct: 145 VKKAEAENAIQMMNGQWLGS--RSIRTNWSTRKPPAPRENTKGIKSGKTPGFEEIYNNTG 202
Query: 165 P-DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQL 223
P + T++ G + L +T + S+ +V D KGY F++F +
Sbjct: 203 PTNTTVYCGGFPPNTISDNLIKTHFGQFGSIHDVRVFKD------KGYAFIKFISKEAAA 256
Query: 224 RSM 226
R++
Sbjct: 257 RAI 259
>gi|260940363|ref|XP_002614481.1| hypothetical protein CLUG_05259 [Clavispora lusitaniae ATCC 42720]
gi|238851667|gb|EEQ41131.1| hypothetical protein CLUG_05259 [Clavispora lusitaniae ATCC 42720]
Length = 651
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 147/325 (45%), Gaps = 79/325 (24%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNK----QTNFS----EGYGFIEFVS 124
R+LW+GDL PW++ES I ++ VS K+I+ K ++ F+ GY F+EF S
Sbjct: 73 RTLWMGDLDPWLDESAIVDLWWQILRSKVSVKLIKPKFIKPESGFTGLSHSGYCFVEFQS 132
Query: 125 HAAAERVLQTFNGTQMPST---------------EQNFRLNWATYGAGERRQDDGPDFTI 169
+ A+ L NG +P ++ FRLNWA+ P++++
Sbjct: 133 YEEAQSAL-ALNGQLLPDIAMPSQKHFPNNPDNQKKYFRLNWASGATLTAPLIHTPEYSL 191
Query: 170 FVGDLAADVTDYVLQETFRAVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ---LRS 225
FVGDL A T+ L F+ + +S++ +V+TD +G+S+ +GFVRF +ESE+ LR
Sbjct: 192 FVGDLTASTTEAHLLSFFQKSFPNSIRTVRVMTDPVSGKSRCFGFVRFTEESERQRALRE 251
Query: 226 M---------------TEMNGVLCSTRPMR------IGPAATKKAATGQQY--------- 255
M T N L P + + PA + A Q
Sbjct: 252 MNGAWFGGRPLRVALATPRNTALLRKSPDQKNMYSGLSPAVPQSPAMIPQEFMYMGGPQG 311
Query: 256 --------------------QKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVF 295
K + +DP+NTT+FVGGL V++ L T+F
Sbjct: 312 SGGPPGPMNSSYGYFPPMMGDKNEFGMNMAGHPYSDPSNTTVFVGGLRSEVSEQTLFTLF 371
Query: 296 GQYGELVHVKIPAGKRCGFVQFANR 320
+G + +KIP GK CGF++++ R
Sbjct: 372 KPFGTIQQIKIPPGKNCGFLKYSTR 396
>gi|300175779|emb|CBK21322.2| unnamed protein product [Blastocystis hominis]
Length = 320
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+LWIGD+Q E Y+ ++ + S K++R++ TN S G+GFI+F + A L
Sbjct: 3 RTLWIGDVQENWTEDYLCALMRNAKGLSSIKLMRDRTTNESLGFGFIDFATEEDAIHALN 62
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
+NG +P T FRLN +G R + G ++ +++GDL + VTD L FR Y S
Sbjct: 63 GYNGRPIPGTGYTFRLN---FGGNSRNLNLGDNYCLYIGDLESSVTDTQLYTIFRDKYLS 119
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
GAK++ + T SKGYGF++F E ++ EMNG + + RP+++ AA ++
Sbjct: 120 FCGAKIMRETGTSVSKGYGFIQFRARDEAETALKEMNGYVINGRPIKLSYAAARR 174
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 25/160 (15%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++GD+ + T+ L R + K++ DRTT S G+GF+ F E + + ++
Sbjct: 4 TLWIGDVQENWTEDYLCALMRNA-KGLSSIKLMRDRTTNESLGFGFIDFATEEDAIHALN 62
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
NG RP+ TG ++ N S+ N +N +++G L+ SVT
Sbjct: 63 GYNG-----RPI---------PGTGYTFRLNFGGN---SRNLNLGDNYCLYIGDLESSVT 105
Query: 288 DDILKTVF-GQYGELVHVKI------PAGKRCGFVQFANR 320
D L T+F +Y KI K GF+QF R
Sbjct: 106 DTQLYTIFRDKYLSFCGAKIMRETGTSVSKGYGFIQFRAR 145
>gi|291228733|ref|XP_002734330.1| PREDICTED: tRNA selenocysteine associated protein 1-like isoform 1
[Saccoglossus kowalevskii]
Length = 347
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 111/191 (58%), Gaps = 18/191 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+LW+GD++P+ +E++I F H+GE + K+++NK T Y F++F AAAERV+
Sbjct: 4 TLWMGDVEPFWDENFIRGAFSHSGEQPTAVKLMKNKLTGGQARYCFVDFRDSAAAERVMS 63
Query: 134 TFNGTQMPSTE--QNFRLNWATYGA-------------GERRQDDGPDFTIFVGDLAADV 178
NG +P++ + F+LN+A YG + + + +F++FVG+L+ +V
Sbjct: 64 ICNGKPVPNSTPPRMFKLNFAVYGMQAPPKAAGATGGPADPKSFNRKEFSLFVGELSPEV 123
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM-NGVLCSTR 237
DY L F Y S+KGAKV+ D G S+G+GFVRFG E EQ R++ EM N R
Sbjct: 124 DDYALYNFFSRRYPSIKGAKVIMD-NAGMSRGFGFVRFGSEEEQQRALNEMQNASGLGGR 182
Query: 238 PMRIGPAATKK 248
+R+ A KK
Sbjct: 183 SLRVSIATPKK 193
>gi|392869588|gb|EJB11873.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Coccidioides immitis RS]
Length = 466
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 134/266 (50%), Gaps = 27/266 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF-SEG--YGFIEFVSHAAAER 130
R+L++G L P + E + IF TG S K+I +K NF S+G YGF+E+ AAER
Sbjct: 92 RALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDK--NFQSKGLNYGFVEYDDPGAAER 149
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A
Sbjct: 150 AMQTLNGRRVHQSE--IRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA- 206
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
+ SV A+V+ D TGRS+GYGFV F + ++ ++++ M+G +R +R A K
Sbjct: 207 FGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQP 266
Query: 251 TGQQYQKATYQN-------------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDIL 291
+ Q Q T G Q + P TT +VG L P T + L
Sbjct: 267 SISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDL 326
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQF 317
+F +G +V + A + FV+
Sbjct: 327 VPLFQNFGYVVETRFQADRGFAFVKM 352
>gi|119174082|ref|XP_001239402.1| hypothetical protein CIMG_09023 [Coccidioides immitis RS]
Length = 485
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 134/266 (50%), Gaps = 27/266 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF-SEG--YGFIEFVSHAAAER 130
R+L++G L P + E + IF TG S K+I +K NF S+G YGF+E+ AAER
Sbjct: 92 RALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDK--NFQSKGLNYGFVEYDDPGAAER 149
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A
Sbjct: 150 AMQTLNGRRVHQSE--IRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA- 206
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
+ SV A+V+ D TGRS+GYGFV F + ++ ++++ M+G +R +R A K
Sbjct: 207 FGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQP 266
Query: 251 TGQQYQKATYQN-------------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDIL 291
+ Q Q T G Q + P TT +VG L P T + L
Sbjct: 267 SISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDL 326
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQF 317
+F +G +V + A + FV+
Sbjct: 327 VPLFQNFGYVVETRFQADRGFAFVKM 352
>gi|452986364|gb|EME86120.1| hypothetical protein MYCFIDRAFT_52503 [Pseudocercospora fijiensis
CIRAD86]
Length = 482
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 137/266 (51%), Gaps = 27/266 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF-SEGY--GFIEFVSHAAAER 130
R+L++G L P + E + IF TG S K+I +K NF S+GY GF+E+ AAER
Sbjct: 81 RALYVGGLDPRVTEDVLKQIFETTGHVQSVKIIPDK--NFQSKGYNYGFVEYDDPGAAER 138
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+QT NG ++ +Q R+NWA ++D F IFVGDL+ +V D VL + F A
Sbjct: 139 AMQTLNGRRV--HQQEIRVNWAYQSNTATKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA- 195
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG-------P 243
+ +V A+V+ D TGRS+GYGFV F D E ++++ M+G +R +R P
Sbjct: 196 FGNVSEARVMWDMKTGRSRGYGFVAFRDRGEAEKALSSMDGEWLGSRAIRCNWANQKGQP 255
Query: 244 AATKKAATGQQYQKAT--YQN----TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDIL 291
+ +++ A Q T Y + TQG Q P TT +VG L P T + L
Sbjct: 256 SFSQQQAMAQMGMTPTTPYGHHSFPTQGPQSYETIVSQTPQWQTTCYVGNLTPYTTQNDL 315
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQF 317
+F +G + + + + F++
Sbjct: 316 VPLFQNFGYVTETRFQSDRGFAFIKM 341
>gi|303314025|ref|XP_003067021.1| oligouridylate binding protein ,putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240106689|gb|EER24876.1| oligouridylate binding protein ,putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320039295|gb|EFW21229.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Coccidioides posadasii str. Silveira]
Length = 483
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 130/263 (49%), Gaps = 23/263 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G L P + E + IF TG S K+I +K + YGF+E+ AAER +Q
Sbjct: 92 RALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNSK-GLNYGFVEYDDPGAAERAMQ 150
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A + S
Sbjct: 151 TLNGRRVHQSE--IRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 207
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V A+V+ D TGRS+GYGFV F + ++ ++++ M+G +R +R A K +
Sbjct: 208 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 267
Query: 254 QYQKATYQN-------------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDILKTV 294
Q Q T G Q + P TT +VG L P T + L +
Sbjct: 268 QQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLVPL 327
Query: 295 FGQYGELVHVKIPAGKRCGFVQF 317
F +G +V + A + FV+
Sbjct: 328 FQNFGYVVETRFQADRGFAFVKM 350
>gi|315052890|ref|XP_003175819.1| nucleolysin TIA-1 [Arthroderma gypseum CBS 118893]
gi|311341134|gb|EFR00337.1| nucleolysin TIA-1 [Arthroderma gypseum CBS 118893]
Length = 506
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 132/268 (49%), Gaps = 27/268 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF---SEG--YGFIEFVSHAAA 128
R+L++G L P + E + IF TG S K+I +K + S+G YGFIE+ AA
Sbjct: 97 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNASAQFQSKGLNYGFIEYDDPGAA 156
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
ER +QT NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F
Sbjct: 157 ERAMQTLNGRRVHQSE--IRVNWAYQSNTASKEDTSSHFHIFVGDLSNEVNDEVLLQAFS 214
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
A SV A+V+ D TGRS+GYGFV F + ++ ++++ M+G +R +R A K
Sbjct: 215 AC-GSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKG 273
Query: 249 AATGQQYQKATYQN-------------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDD 289
+ Q Q T G Q + P TT +VG L P T +
Sbjct: 274 QPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQN 333
Query: 290 ILKTVFGQYGELVHVKIPAGKRCGFVQF 317
L +F +G +V + A + FV+
Sbjct: 334 DLIPLFQNFGYVVETRFQADRGFAFVKM 361
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
+PN ++VGGLDP VT+DILK +F G + VKI
Sbjct: 93 EPNKRALYVGGLDPRVTEDILKQIFETTGHVQSVKI 128
>gi|225682885|gb|EEH21169.1| nucleolysin TIA-1 [Paracoccidioides brasiliensis Pb03]
Length = 471
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 128/263 (48%), Gaps = 23/263 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G L P + E + IF TG S K+I +K + YGF+E+ AAER +
Sbjct: 100 RALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNSK-GLNYGFVEYDDPGAAERAMA 158
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A + S
Sbjct: 159 TLNGRRVHQSE--IRVNWAYQSNSNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 215
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V A+V+ D TGRS+GYGFV F + S+ ++++ M+G +R +R A K +
Sbjct: 216 VSEARVMWDMKTGRSRGYGFVAFRERSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 275
Query: 254 QYQKATYQN-------------TQGSQ------GENDPNNTTIFVGGLDPSVTDDILKTV 294
Q Q T G Q + TT +VG L P T + L +
Sbjct: 276 QQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVAQTPQWQTTCYVGNLTPYTTQNDLVPL 335
Query: 295 FGQYGELVHVKIPAGKRCGFVQF 317
F +G +V + A + FV+
Sbjct: 336 FQNFGYVVETRFQADRGFAFVKM 358
>gi|341893520|gb|EGT49455.1| CBN-TIAR-2 protein [Caenorhabditis brenneri]
Length = 420
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 147/291 (50%), Gaps = 26/291 (8%)
Query: 45 VGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGK 104
VG+ P+ V + + Y +A + S+ R+L++G+L P + + +IA++F G K
Sbjct: 12 VGYNPR-VHARVAEKEGYQLA--SGSEDPRTLFVGNLDPAVTDEFIATLFNQMGAVTKAK 68
Query: 105 VIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATY----GAGERR 160
+I + Q ++ Y FIEF H A + LQ+ NG Q+ E R+NWA G R+
Sbjct: 69 IIFDFQ-GLADPYAFIEFSDHNQAAQALQSMNGRQLLDRE--LRVNWAVEPNQPGDSSRK 125
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
D F +FVGDL++++ L+E F + V AK++ D TT ++KGYGFV +
Sbjct: 126 MDYSRHFHVFVGDLSSEIDSTKLKEAFLP-FGEVSEAKIIRDTTTNKAKGYGFVSYPRRE 184
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAAT--------------GQQYQKATYQNTQGS 266
+ R++ +MNG R +R A+ K G+++ +
Sbjct: 185 DAERAIEQMNGQWLGRRTIRTNWASRKPGEEGERRGGGFERDRERGERFHGGFEKTYDEI 244
Query: 267 QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
+ P+NT+++VG + S+T+D ++ F ++G + V+I + FV+F
Sbjct: 245 FHQTSPDNTSVYVGQIG-SLTEDEIRRAFDRFGAINEVRIFKLQGYAFVKF 294
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 87/207 (42%), Gaps = 48/207 (23%)
Query: 62 YGVAPDASSDGIRSL--------WIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF 113
+ V P+ D R + ++GDL ++ + + F GE K+IR+ TN
Sbjct: 112 WAVEPNQPGDSSRKMDYSRHFHVFVGDLSSEIDSTKLKEAFLPFGEVSEAKIIRDTTTNK 171
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWAT-------------------- 153
++GYGF+ + AER ++ NG + + R NWA+
Sbjct: 172 AKGYGFVSYPRREDAERAIEQMNGQWL--GRRTIRTNWASRKPGEEGERRGGGFERDRER 229
Query: 154 ----YGAGERRQDD-----GPDFT-IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDR 203
+G E+ D+ PD T ++VG + + D + + R + ++ ++
Sbjct: 230 GERFHGGFEKTYDEIFHQTSPDNTSVYVGQIGSLTEDEIRRAFDR--FGAINEVRIF--- 284
Query: 204 TTGRSKGYGFVRFGDESEQLRSMTEMN 230
+ +GY FV+F + R++ +MN
Sbjct: 285 ---KLQGYAFVKFEQKEPAARAIVQMN 308
>gi|255574179|ref|XP_002528005.1| nucleolysin tia-1, putative [Ricinus communis]
gi|223532631|gb|EEF34417.1| nucleolysin tia-1, putative [Ricinus communis]
Length = 417
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 145/302 (48%), Gaps = 34/302 (11%)
Query: 35 QQHQTPVPPPV--GWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIAS 92
QQH P V Q P PS + P S RS+++G++ + E +A
Sbjct: 3 QQHHHMYHPGVLAAAMSQMEPIPSGN-----LPPGFDSSACRSVYVGNIHVNVTEKLLAE 57
Query: 93 IFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWA 152
+F G K+IR +++ YGF+++ + A + T +G Q+ Q ++NWA
Sbjct: 58 VFQTAGPLAGCKLIRKDKSS----YGFVDYHDRSCAAVAIMTLHGRQLYG--QALKVNWA 111
Query: 153 TYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYG 212
A +R+D F IFVGDL+ +VTD L F +VY+S A+V+ D TGRSKGYG
Sbjct: 112 Y--ANSQREDTSGHFHIFVGDLSPEVTDATLFACF-SVYNSCSDARVMWDHKTGRSKGYG 168
Query: 213 FVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN----TQGSQG 268
FV F ++ E ++ +++G R +R ATK +A+ + Q QN T GS
Sbjct: 169 FVSFRNQREAQSAINDLSGKWLGNRQIRCN-WATKGSASNEDKQIGDNQNAVILTSGSSE 227
Query: 269 -----------ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGE--LVHVKIPAGKRCGFV 315
EN+P TT++VG L VT L F G + V++ K GFV
Sbjct: 228 GGQENANEDAPENNPAYTTVYVGNLCHEVTQSELHCQFHTLGAGIIEEVRVQRDKGFGFV 287
Query: 316 QF 317
++
Sbjct: 288 RY 289
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 85/196 (43%), Gaps = 37/196 (18%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + ++ + + F +V+ + +T S+GYGF+ F + A+ +
Sbjct: 126 IFVGDLSPEVTDATLFACFSVYNSCSDARVMWDHKTGRSKGYGFVSFRNQREAQSAINDL 185
Query: 136 NGTQMPSTEQNFRLNWATYGAG-------------------------ERRQDDGPD---- 166
+G + + + R NWAT G+ E +D P+
Sbjct: 186 SGKWLGNRQ--IRCNWATKGSASNEDKQIGDNQNAVILTSGSSEGGQENANEDAPENNPA 243
Query: 167 -FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
T++VG+L +VT L F + GA ++ + R KG+GFVR+ E +
Sbjct: 244 YTTVYVGNLCHEVTQSELHCQFHTL-----GAGIIEEVRVQRDKGFGFVRYTTHEEAASA 298
Query: 226 MTEMNGVLCSTRPMRI 241
+ NG + +PM+
Sbjct: 299 IQMANGKIVRGKPMKC 314
>gi|384484722|gb|EIE76902.1| hypothetical protein RO3G_01606 [Rhizopus delemar RA 99-880]
Length = 204
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 83/121 (68%), Gaps = 1/121 (0%)
Query: 200 VTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKAT 259
+T+ +TG S+GYGFVRF D+ EQ +++TEMNG+LC RPMR+ AT K ++Y +
Sbjct: 1 MTNSSTGLSRGYGFVRFSDQQEQQQAVTEMNGILCKNRPMRVS-FATPKTNNQERYIQLA 59
Query: 260 YQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFAN 319
Q Q DPNNTT+F+GGL VT+D L+ FG +G++++VK+P GK CGFVQ+
Sbjct: 60 LQAPALVQQPTDPNNTTVFIGGLSSPVTEDELRQYFGSFGDIMNVKLPPGKGCGFVQYTT 119
Query: 320 R 320
R
Sbjct: 120 R 120
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 24/151 (15%)
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQ---- 161
+ N T S GYGF+ F ++ + NG + + R+++AT + +
Sbjct: 1 MTNSSTGLSRGYGFVRFSDQQEQQQAVTEMNG--ILCKNRPMRVSFATPKTNNQERYIQL 58
Query: 162 -----------DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKG 210
D + T+F+G L++ VT+ L++ F + + K+ KG
Sbjct: 59 ALQAPALVQQPTDPNNTTVFIGGLSSPVTEDELRQYF-GSFGDIMNVKLPP------GKG 111
Query: 211 YGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
GFV++ ++ +MNG L T +R+
Sbjct: 112 CGFVQYTTRISAETAIEKMNGFLIGTSRIRL 142
>gi|195035701|ref|XP_001989310.1| GH11659 [Drosophila grimshawi]
gi|193905310|gb|EDW04177.1| GH11659 [Drosophila grimshawi]
Length = 364
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 106/182 (58%), Gaps = 13/182 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+P+M E++I + F GE + +++RNK T GY F+ F+S A +
Sbjct: 8 LWMGSLEPYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 135 FNGTQMPSTE--QNFRLNWATYG---AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
NG +P T FRLN A+ G R+ F+++VGDL +DV DY L + F +
Sbjct: 68 LNGKHIPGTNPIVRFRLNSASNSFKLPGNERE-----FSVWVGDLTSDVDDYSLYKVFSS 122
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKK 248
Y+S+K AKV+ D + G SKGYGFVRFG E EQ ++ +MNG + T+P++I A K
Sbjct: 123 KYTSIKTAKVILD-SLGFSKGYGFVRFGIEDEQKSALYDMNGYVGLGTKPIKICNAVPKP 181
Query: 249 AA 250
A
Sbjct: 182 KA 183
>gi|356565743|ref|XP_003551097.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 411
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 154/308 (50%), Gaps = 32/308 (10%)
Query: 31 QQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPY---GVAPDASSDGIRSLWIGDLQPWMEE 87
Q Q+ + Q + P + P + PP Q +P + P S RS+++G++ P + +
Sbjct: 2 QPQRLRQQAMMQPSLYHHPALLTPP--QIEPILSGNLPPGFDSSSCRSVYVGNIHPQVTD 59
Query: 88 SYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNF 147
S + +F G K+IR ++++ YGF+++ ++A + T NG + Q
Sbjct: 60 SLLQELFSTAGALEGCKLIRKEKSS----YGFVDYFDRSSAAFAIVTLNGRNI--FGQPI 113
Query: 148 RLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGR 207
++NWA A +R+D F IFVGDL+ +VTD L F +VY S A+V+ D+ TGR
Sbjct: 114 KVNWAY--ASSQREDTSGHFNIFVGDLSPEVTDATLYACF-SVYPSCSDARVMWDQKTGR 170
Query: 208 SKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNT 263
S+G+GFV F ++ + ++ ++ G +R +R ATK A+ + Q ++ + T
Sbjct: 171 SRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN-WATKGASASDEKQTSDSRSVVELT 229
Query: 264 QGSQG-----------ENDPNNTTIFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGK 310
GS E +P TT++VG L P VT L F G + V++ K
Sbjct: 230 NGSSEDGQETTNDDTPEKNPQYTTVYVGNLAPEVTSVDLHQHFHSLNAGTIEDVRVQRDK 289
Query: 311 RCGFVQFA 318
GFV+++
Sbjct: 290 GFGFVRYS 297
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 37/202 (18%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
+ G ++++GDL P + ++ + + F +V+ +++T S G+GF+ F + A+
Sbjct: 127 TSGHFNIFVGDLSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ 186
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYGAG-------------------------ERRQDDG 164
+ G + S + R NWAT GA E DD
Sbjct: 187 SAINDLTGKWLGSRQ--IRCNWATKGASASDEKQTSDSRSVVELTNGSSEDGQETTNDDT 244
Query: 165 PD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDE 219
P+ T++VG+LA +VT L + F ++ A + D R KG+GFVR+
Sbjct: 245 PEKNPQYTTVYVGNLAPEVTSVDLHQHFHSL-----NAGTIEDVRVQRDKGFGFVRYSTH 299
Query: 220 SEQLRSMTEMNGVLCSTRPMRI 241
+E ++ N + +P++
Sbjct: 300 AEAALAIQMGNARILFGKPIKC 321
>gi|407927556|gb|EKG20446.1| hypothetical protein MPH_02256 [Macrophomina phaseolina MS6]
Length = 485
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 128/265 (48%), Gaps = 24/265 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG--YGFIEFVSHAAAERV 131
R+L++G L P + E + IF G VS K+I +K S+G YGF+E+ AER
Sbjct: 87 RALYVGGLDPRITEDVLRQIFETAGHVVSVKIIPDKNKFQSKGLNYGFVEYDDPGTAERA 146
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+QT NG ++ +E R+NWA + ++D F IFVGDL+ +V D VL + F A +
Sbjct: 147 MQTLNGRRVHQSE--IRVNWAYQSNNQPKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-F 203
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT 251
V A+V+ D TGRS+GYGFV F D + ++++ M+G +R +R A K +
Sbjct: 204 GQVSEARVMWDMKTGRSRGYGFVAFRDRGDAEKALSSMDGEWLGSRAIRCNWANQKGQPS 263
Query: 252 GQQYQKATYQN-------------TQGSQGENDPNN------TTIFVGGLDPSVTDDILK 292
Q Q T G Q N TT +VG L P T L
Sbjct: 264 ISQQQAMASMGMTPTTPYGHHHFPTHGVQSYEMVVNQTPQWQTTCYVGNLTPYTTQSDLV 323
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQF 317
+F +G +V + + + F++
Sbjct: 324 PLFQNFGYVVETRFQSDRGFAFIKM 348
>gi|168027694|ref|XP_001766364.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682273|gb|EDQ68692.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 405
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 134/270 (49%), Gaps = 29/270 (10%)
Query: 67 DASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHA 126
DA+S RS+++G++ + E +A +F G K+IR +++ YGF+++ H
Sbjct: 16 DATS--CRSVYVGNIHSRVTEGLLAEVFASLGPLEGCKLIRKDKSS----YGFVDYFDHR 69
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQET 186
+A L T NG QM Q+ ++NWA Y +G+R F +FVGDL+A+VTD L
Sbjct: 70 SAVAALSTLNGRQMFG--QSIKVNWA-YASGQREDTTAGHFNVFVGDLSAEVTDATLFAA 126
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA- 245
F +Y S A+V+ D+ +GRS+G+GFV F + E S++EM G TRP+R AA
Sbjct: 127 F-CIYPSCSDARVMWDQRSGRSRGFGFVSFRSQQEAESSISEMTGKWLGTRPIRCNWAAK 185
Query: 246 ------------TKKAATGQQYQKATYQNTQGSQGENDPN----NTTIFVGGLDPSVTDD 289
T + T ++ Q S + P TT++VG L +T
Sbjct: 186 TNNTIQADESKLTTRGLTLCCLADVRSEDRQDSSAGDGPEINSQYTTVYVGNLSQQITQA 245
Query: 290 ILKTVFGQYGELV--HVKIPAGKRCGFVQF 317
L F G V V++ K GFV++
Sbjct: 246 ELHRQFHSLGAGVIEDVRVQKEKGFGFVRY 275
>gi|255724936|ref|XP_002547397.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135288|gb|EER34842.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 451
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 139/260 (53%), Gaps = 19/260 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSG----KVIRNKQTNFSEGYGFIEFVSHAAAERV 131
LW+GDL P E +I ++ + VS K++R+K Y F+ F + +
Sbjct: 84 LWMGDLDPNWTEDWITELWT---KLVSKPQHVKLMRDKLNPSRASYCFVTFKDQESVDLA 140
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP---DFTIFVGDLAADVTDYVLQETFR 188
+Q NG ++P +++ F+LN + + R+++ G DF++F+GDL +V+D L F
Sbjct: 141 IQR-NGQKVPDSDRFFKLNHSGKHSSGRQENHGAHIADFSMFIGDLVPEVSDATLFSKFN 199
Query: 189 AVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA-T 246
Y + +K AKV+ D T +SKG+GFV+F +++TEM G + ++ +R+G AA +
Sbjct: 200 TKYPNQIKQAKVIVDLNTKKSKGFGFVKFFTAEVMNKALTEMQGYIIGSKAIRVGLAAGS 259
Query: 247 KKAATGQQYQKATYQNTQGSQGE------NDPNNTTIFVGGLDPSVTDDILKTVFGQYGE 300
+T Q K Y +Q + DPNN ++ + GL +T+ LK F +G+
Sbjct: 260 TTDSTTQPITKFDYHKIHIAQQQPPLNQVTDPNNNSLTIRGLASQITEIELKQHFIAFGD 319
Query: 301 LVHVKIPAGKRCGFVQFANR 320
L++ ++ + G+V+F +R
Sbjct: 320 LIYCQVSNDYQTGYVKFYSR 339
>gi|91086169|ref|XP_970456.1| PREDICTED: similar to TIA-1 homolog [Tribolium castaneum]
gi|270010230|gb|EFA06678.1| hypothetical protein TcasGA2_TC009608 [Tribolium castaneum]
Length = 364
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 129/254 (50%), Gaps = 18/254 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L P + E + ++F G K+IR ++ Y F+EF +H +A L
Sbjct: 8 KTLYVGNLDPSVSEDLLCTLFSQIGPVKGCKIIREPG---NDPYAFVEFTNHQSASTALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N ++ ++NWAT + +QD IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRLF--LDKEMKVNWATSPGNQPKQDTSNHHHIFVGDLSPEIETETLREAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG-------PAAT 246
+ ++V D T +SKGY FV F ++E ++ MNG +R +R P T
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQAMNGQWLGSRSIRTNWSTRKPPPPKT 181
Query: 247 KKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
+KAA Q+ ++ T+ ++ P N T++ GG +T+D+++ F Q+G + +++
Sbjct: 182 EKAA--QRAKQPTFDEVYN---QSSPTNCTVYCGGFTTGLTEDLMQKTFSQFGVIQDIRV 236
Query: 307 PAGKRCGFVQFANR 320
K F++FA +
Sbjct: 237 FKDKGYAFIKFATK 250
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 43/210 (20%)
Query: 45 VGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGK 104
V W P P Q T + +++GDL P +E + F GE + +
Sbjct: 78 VNWATSPGNQPKQDTSNH-----------HHIFVGDLSPEIETETLREAFAPFGEISNCR 126
Query: 105 VIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATY--------GA 156
++R+ QT S+GY F+ FV A AE +Q NG + S ++ R NW+T A
Sbjct: 127 IVRDPQTLKSKGYAFVSFVKKAEAENAIQAMNGQWLGS--RSIRTNWSTRKPPPPKTEKA 184
Query: 157 GER----------RQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTG 206
+R Q + T++ G +T+ ++Q+TF V+ D
Sbjct: 185 AQRAKQPTFDEVYNQSSPTNCTVYCGGFTTGLTEDLMQKTFSQF-------GVIQDIRVF 237
Query: 207 RSKGYGFVRFGDESEQLRSM-----TEMNG 231
+ KGY F++F + ++ TE+NG
Sbjct: 238 KDKGYAFIKFATKESATHAIETIHNTEING 267
>gi|344302744|gb|EGW33018.1| hypothetical protein SPAPADRAFT_60343 [Spathaspora passalidarum
NRRL Y-27907]
Length = 457
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 141/266 (53%), Gaps = 23/266 (8%)
Query: 76 LWIGDLQP-WMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
LW+GDL W EE+ I I+ E VS K+IR+K GY F+ F + + + +Q
Sbjct: 91 LWMGDLDSNWTEEA-IDYIWASLVEKPVSVKIIRDKLNPTKPGYCFVTFNNQKSVDLAMQ 149
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQ--------DDGPDFTIFVGDLAADVTDYVLQE 185
NG +PS+ + F+LN+A+ G Q D DF++FVGDL +V++ +L
Sbjct: 150 R-NGQPVPSSNKYFKLNYASGGGHGGGQSRHAASGGDSSNDFSMFVGDLGHEVSEALLFN 208
Query: 186 TFRAVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
F Y + +K KV+ D TT +SKG+GFVRF + R++ EMNGV ++ +R+G A
Sbjct: 209 KFNHKYPNQIKHVKVIIDPTTKKSKGFGFVRFLNGEALNRALQEMNGVEIGSKAIRVGLA 268
Query: 245 A-----TKKAATGQQ----YQKATYQNTQGSQGE-NDPNNTTIFVGGLDPSVTDDILKTV 294
+ +K T Q Y++ Q + D +NT++ + GL T+ L+
Sbjct: 269 SGASVDIQKGPTSSQGTVDYRRVVVPQPQPDLNQYTDYDNTSLVIKGLASKFTERELEMY 328
Query: 295 FGQYGELVHVKIPAGKRCGFVQFANR 320
F +G+L+H K+ + + G++++ R
Sbjct: 329 FIGFGDLIHCKLSSDFQTGYIKYYLR 354
Score = 43.9 bits (102), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 19/163 (11%)
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
F +++GDL ++ T+ + + ++ K++ D+ GY FV F ++ +M
Sbjct: 89 FQLWMGDLDSNWTEEAIDYIWASLVEKPVSVKIIRDKLNPTKPGYCFVTFNNQKSVDLAM 148
Query: 227 TEMNG--VLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDP 284
+ NG V S + ++ A+ GQ A+ G + N+ ++FVG L
Sbjct: 149 -QRNGQPVPSSNKYFKLNYASGGGHGGGQSRHAAS--------GGDSSNDFSMFVGDLGH 199
Query: 285 SVTDDILKTVFGQY--GELVHVKI---PAGKRC---GFVQFAN 319
V++ +L F ++ HVK+ P K+ GFV+F N
Sbjct: 200 EVSEALLFNKFNHKYPNQIKHVKVIIDPTTKKSKGFGFVRFLN 242
>gi|195117982|ref|XP_002003519.1| GI17961 [Drosophila mojavensis]
gi|193914094|gb|EDW12961.1| GI17961 [Drosophila mojavensis]
Length = 346
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 107/182 (58%), Gaps = 13/182 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+P+M E++I + F GE + +++RNK T GY F+ F+S A +
Sbjct: 8 LWMGSLEPYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 135 FNGTQMPSTE--QNFRLNWATYGA---GERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
NG +P T FRLN A+ G R+ F+++VGDL++DV DY L + F +
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE-----FSVWVGDLSSDVDDYSLYKVFSS 122
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKK 248
Y+S+K AKV+ D + G SKGYGFVRFG E EQ ++ +MNG + T+P++I A K
Sbjct: 123 KYTSIKTAKVILD-SLGFSKGYGFVRFGIEDEQKSALYDMNGYVGLGTKPIKICNAVPKP 181
Query: 249 AA 250
A
Sbjct: 182 KA 183
>gi|443687463|gb|ELT90434.1| hypothetical protein CAPTEDRAFT_110688, partial [Capitella teleta]
Length = 353
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 124/244 (50%), Gaps = 6/244 (2%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFN 136
++G+L P + E + ++FG G K+I +E Y F+EF H++A L T N
Sbjct: 1 YVGNLDPTVTEDLLMALFGSIGPCKGCKIIHETG---NEPYAFVEFSEHSSAALALGTMN 57
Query: 137 GTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKG 196
E ++NWAT + +QD IFVGDL+ D+ L+E F+ + ++
Sbjct: 58 KRTCFGRE--MKVNWATSPGTQTKQDTSKHHHIFVGDLSPDIETPQLREAFKP-FGTISD 114
Query: 197 AKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ 256
K++ D T +SKGYGFV + + E ++ MNG +R +R A K AA +
Sbjct: 115 CKIIRDPQTLKSKGYGFVSYVERKEAENAINSMNGQWIGSRAIRTNWAIRKPAAPATKET 174
Query: 257 KATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQ 316
A ++ P N T++ GG+ +T+D++++ FG++G++ +++ K F++
Sbjct: 175 NAQPLTFDEVFKKSSPTNCTVYCGGILSGLTEDLVRSAFGEHGKIEEIRVFKDKGYAFIR 234
Query: 317 FANR 320
+ +
Sbjct: 235 YNTK 238
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 25/171 (14%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P +E + F G K+IR+ QT S+GYGF+ +V AE + +
Sbjct: 88 IFVGDLSPDIETPQLREAFKPFGTISDCKIIRDPQTLKSKGYGFVSYVERKEAENAINSM 147
Query: 136 NGTQMPSTEQNFRLNWATYGAG---------------ERRQDDGP-DFTIFVGDLAADVT 179
NG + S + R NWA E + P + T++ G + + +T
Sbjct: 148 NGQWIGS--RAIRTNWAIRKPAAPATKETNAQPLTFDEVFKKSSPTNCTVYCGGILSGLT 205
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMN 230
+ +++ F + ++ +V D KGY F+R+ + ++ +M+
Sbjct: 206 EDLVRSAF-GEHGKIEEIRVFKD------KGYAFIRYNTKEAATEAIVKMH 249
>gi|47207834|emb|CAF95099.1| unnamed protein product [Tetraodon nigroviridis]
Length = 286
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 103/178 (57%), Gaps = 9/178 (5%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGE-FVSGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
+ +LW+G+L +M+E +I F GE VS ++IRNK T + GY F+E A AER
Sbjct: 1 MSTLWMGNLDSYMDEKFITRAFSTMGEQAVSVRIIRNKMTGGAMGYCFVEMSDEATAERC 60
Query: 132 LQTFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
L+ NG +P S F+LN AT+G +QD G +++FVGDL +V D +L E F
Sbjct: 61 LRKINGKSLPGASPPTRFKLNRATFG----KQDVGQMYSLFVGDLTPEVDDGMLYEFFYN 116
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAAT 246
Y S +G KVV D + G SKG GFV+F DE Q R++ E G + + +R+ AA
Sbjct: 117 RYPSCRGGKVVLD-SMGNSKGCGFVQFPDERLQKRALDECQGAMGLGGKALRLSLAAN 173
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 30/160 (18%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++G+L + + + + F + +++ ++ TG + GY FV DE+ R +
Sbjct: 3 TLWMGNLDSYMDEKFITRAFSTMGEQAVSVRIIRNKMTGGAMGYCFVEMSDEATAERCLR 62
Query: 228 EMNG-VLCSTRP---MRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLD 283
++NG L P ++ A K GQ Y ++FVG L
Sbjct: 63 KINGKSLPGASPPTRFKLNRATFGKQDVGQMY--------------------SLFVGDLT 102
Query: 284 PSVTDDILKTVF-GQY-----GELVHVKIPAGKRCGFVQF 317
P V D +L F +Y G++V + K CGFVQF
Sbjct: 103 PEVDDGMLYEFFYNRYPSCRGGKVVLDSMGNSKGCGFVQF 142
>gi|449302198|gb|EMC98207.1| hypothetical protein BAUCODRAFT_416441 [Baudoinia compniacensis
UAMH 10762]
Length = 479
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 133/266 (50%), Gaps = 27/266 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF-SEGY--GFIEFVSHAAAER 130
R+L++G L P + E + IF TG S K+I +K NF S+GY GF+E+ AER
Sbjct: 82 RALYVGGLDPRVTEDVLKQIFETTGHVQSVKIIPDK--NFQSKGYNYGFVEYDDPQCAER 139
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+QT NG ++ +Q R+NWA ++D F IFVGDL+ +V D VL + F A
Sbjct: 140 AMQTLNGRRV--HQQEIRVNWAYQSNTISKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA- 196
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
+ +V A+V+ D TGRS+GYGFV F D + ++++ M+G +R +R A K
Sbjct: 197 FGTVSEARVMWDMKTGRSRGYGFVSFRDRGDAEKALSSMDGEWLGSRAIRCNWANQKGQP 256
Query: 251 TGQQYQKATYQN-------------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDIL 291
+ Q Q TQG+Q + P TT +VG L P T + L
Sbjct: 257 SYSQAQAMVQMGMTPTTPYGHHTFPTQGAQSFEMIVQQTPQWQTTCYVGNLTPYTTQNDL 316
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQF 317
+F +G + + + + FV+
Sbjct: 317 VPLFQNFGYVTETRFHSDRGFAFVKM 342
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 7/54 (12%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI-------PAGKRCGFVQF 317
+PN ++VGGLDP VT+D+LK +F G + VKI G GFV++
Sbjct: 78 EPNKRALYVGGLDPRVTEDVLKQIFETTGHVQSVKIIPDKNFQSKGYNYGFVEY 131
>gi|193648018|ref|XP_001950341.1| PREDICTED: nucleolysin TIAR-like [Acyrthosiphon pisum]
Length = 388
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 130/252 (51%), Gaps = 14/252 (5%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L P + E + ++F + G + KVIR S+ Y F+EF +H+ A L
Sbjct: 8 RTLYVGNLDPSVTEELLCALFTNIGPVNACKVIREPG---SDPYAFLEFDTHSGAATALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ ++NWAT + + D + IFVGDL+ ++ + L+E F A +
Sbjct: 65 AMNGRLF--LDKEMKVNWATTPGNQPKLDTSNHYHIFVGDLSPEIETHTLKEAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG-----PAATKK 248
+ ++V D T +SKGY FV F +S+ ++ MNG +R +R P +
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKSDAENAINSMNGQWLGSRSIRTNWSTRKPPPPRA 181
Query: 249 AATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA 308
Y+ T+ + ++ P N T++ GG+ +T+++++ VF ++G +V ++
Sbjct: 182 PNKYSGYRAVTFDDVYN---QSSPTNCTVYCGGIVEGLTEELVEQVFSRFGTIVEIRAFR 238
Query: 309 GKRCGFVQFANR 320
K F++F+ +
Sbjct: 239 DKGYAFIKFSTK 250
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 32/192 (16%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + F GE + +++R+ QT S+GY F+ F
Sbjct: 85 GNQPKLDTSNHYHIFVGDLSPEIETHTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 144
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG----------AGER--------RQDDG 164
V + AE + + NG + S ++ R NW+T +G R Q
Sbjct: 145 VKKSDAENAINSMNGQWLGS--RSIRTNWSTRKPPPPRAPNKYSGYRAVTFDDVYNQSSP 202
Query: 165 PDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLR 224
+ T++ G + +T+ ++++ F + +V R R KGY F++F +
Sbjct: 203 TNCTVYCGGIVEGLTEELVEQVFS------RFGTIVEIRAF-RDKGYAFIKFSTKEAATT 255
Query: 225 SM-----TEMNG 231
++ TE+NG
Sbjct: 256 AIEAVHNTEING 267
>gi|442760033|gb|JAA72175.1| Putative trna selenocysteine 1-associated protein 1 [Ixodes
ricinus]
Length = 226
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 119/215 (55%), Gaps = 28/215 (13%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+LW+GDL+P M+E ++ F GE V K+IRN+ T GYGF++F AA+R L
Sbjct: 7 TLWMGDLEPTMDEYFVQQAFTMMGENPVHVKIIRNRITGMPRGYGFLDFGDEEAAQRALL 66
Query: 134 TFNGTQMPSTEQ--NFRLNWATYGAGER------------------RQDDGP--DFTIFV 171
NG +P+ Q FRLN A G G RQ G +F++FV
Sbjct: 67 RCNGRPIPNATQPKTFRLNHANNGTGTGGGGGGGGGGSYGNYSSGGRQQYGSSSEFSMFV 126
Query: 172 GDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM-N 230
GDL+++V D L F Y SVK AKVV D+ +G SKG+GFVRF DESE ++ +M +
Sbjct: 127 GDLSSEVDDGHLYHAFSQRYPSVKAAKVVLDQ-SGLSKGFGFVRFSDESEYQEALVDMQH 185
Query: 231 GVLCSTRPMRIGPAATKKAATGQ---QYQKATYQN 262
+L ++P+R+G A ++ A G+ Q+ Y+N
Sbjct: 186 SLLVGSKPIRVGVANPRRVADGRVGGDGQRVFYRN 220
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 14/166 (8%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++GDL + +Y +Q+ F + + K++ +R TG +GYGF+ FGDE R++
Sbjct: 7 TLWMGDLEPTMDEYFVQQAFTMMGENPVHVKIIRNRITGMPRGYGFLDFGDEEAAQRALL 66
Query: 228 EMNG--VLCSTRP--MRIGPAATKKAATGQQYQKATYQNTQGS----QGENDPNNTTIFV 279
NG + +T+P R+ A G S Q + ++FV
Sbjct: 67 RCNGRPIPNATQPKTFRLNHANNGTGTGGGGGGGGGGSYGNYSSGGRQQYGSSSEFSMFV 126
Query: 280 GGLDPSVTDDILKTVFGQ-YGELVHVKIP-----AGKRCGFVQFAN 319
G L V D L F Q Y + K+ K GFV+F++
Sbjct: 127 GDLSSEVDDGHLYHAFSQRYPSVKAAKVVLDQSGLSKGFGFVRFSD 172
>gi|255576617|ref|XP_002529199.1| nucleolysin tia-1, putative [Ricinus communis]
gi|223531377|gb|EEF33213.1| nucleolysin tia-1, putative [Ricinus communis]
Length = 422
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 146/290 (50%), Gaps = 28/290 (9%)
Query: 47 WTPQPVPPPSQQTQPYG-VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKV 105
+ P + PP + P G + P RS+++G++ + E + +F TG S K+
Sbjct: 25 YHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFASTGPVESCKL 84
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
IR ++++ YGFI + +A + + NG + Q ++NWA Y +G+R +D
Sbjct: 85 IRKEKSS----YGFIHYFDRRSAALAILSLNGRHLFG--QPIKVNWA-YASGQR-EDTSG 136
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
+ IFVGDL+ +VTD L F +VY S A+V+ D+ TGRS+G+GFV F ++ + +
Sbjct: 137 HYNIFVGDLSPEVTDATLFACF-SVYHSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSA 195
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQG-----------EN 270
+ ++ G +R +R ATK A + Q K+ + T GS EN
Sbjct: 196 INDLTGKWLGSRQIRCN-WATKGATSNDDKQSSDAKSVVELTNGSSEEGKETANNDAPEN 254
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQFA 318
+P TT++VG L P VT L F G V V++ K GFV+F+
Sbjct: 255 NPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRFS 304
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 37/182 (20%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
+ G ++++GDL P + ++ + + F +V+ +++T S G+GF+ F + A+
Sbjct: 134 TSGHYNIFVGDLSPEVTDATLFACFSVYHSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ 193
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYGA-------------------------GERRQDDG 164
+ G + S + R NWAT GA E +D
Sbjct: 194 SAINDLTGKWLGSRQ--IRCNWATKGATSNDDKQSSDAKSVVELTNGSSEEGKETANNDA 251
Query: 165 PD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDE 219
P+ T++VG+LA +VT L F ++ GA V+ + R KG+GFVRF
Sbjct: 252 PENNPQYTTVYVGNLAPEVTQLDLHRHFHSL-----GAGVIEEVRVQRDKGFGFVRFSTH 306
Query: 220 SE 221
+E
Sbjct: 307 AE 308
>gi|308493359|ref|XP_003108869.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
gi|308247426|gb|EFO91378.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
Length = 404
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 135/255 (52%), Gaps = 15/255 (5%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
SD R+L++G+L P + E IA++F G KVI + ++ Y F+EF+ H+ A
Sbjct: 40 SDEPRTLYVGNLDPSVSEDLIATLFNQIGSVTKTKVIFDGA---NDPYAFVEFLDHSQAS 96
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATY-GAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
+ LQT N + E ++NWA G + D F +FVGDL+++V + L+E F+
Sbjct: 97 QALQTMNKRLLLDRE--MKVNWAVEPGQQPSKVDTTRHFHVFVGDLSSEVDNQKLREAFQ 154
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ V AKV+ D T +SKGYGFV + E R++ +MNG R +R A K
Sbjct: 155 P-FGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK- 212
Query: 249 AATGQQYQKATYQNTQGSQ---GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
G Q +K T+ N + + +NT+++VG + ++++D ++ F YG + V+
Sbjct: 213 --PGDQ-EKPTHYNEKSFDEIYNQTSGDNTSVYVGNI-ANLSEDEIRQAFASYGRISEVR 268
Query: 306 IPAGKRCGFVQFANR 320
I + FV+F N+
Sbjct: 269 IFKMQGYAFVKFDNK 283
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 86/182 (47%), Gaps = 32/182 (17%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL ++ + F G+ KVIR+ T S+GYGF+ + AER ++
Sbjct: 135 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 194
Query: 136 NGTQMPSTEQNFRLNWATYGAGERR---------------QDDGPDFTIFVGDLAADVTD 180
NG + + R NWAT G++ Q G + +++VG++ A++++
Sbjct: 195 NGQWL--GRRTIRTNWATRKPGDQEKPTHYNEKSFDEIYNQTSGDNTSVYVGNI-ANLSE 251
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG-------VL 233
+++ F A Y + ++ + +GY FV+F ++ +++ +MN V
Sbjct: 252 DEIRQAF-ASYGRISEVRIF------KMQGYAFVKFDNKDAAAKAIVQMNNQEVGGQLVR 304
Query: 234 CS 235
CS
Sbjct: 305 CS 306
>gi|367002926|ref|XP_003686197.1| hypothetical protein TPHA_0F02820 [Tetrapisispora phaffii CBS 4417]
gi|357524497|emb|CCE63763.1| hypothetical protein TPHA_0F02820 [Tetrapisispora phaffii CBS 4417]
Length = 608
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 147/381 (38%), Gaps = 122/381 (32%)
Query: 51 PVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIR--- 107
P+PP S S + R+LW+GDL P +E I I+ V K+I+
Sbjct: 12 PLPPTS--------TIRTSVESPRTLWMGDLNPLFDELTITKIWKSLNLPVFVKLIKARK 63
Query: 108 -------------------------NKQTNFS-----------------------EGYGF 119
N + NF GY F
Sbjct: 64 NLLISSSSTKSQHSTSNNSPESGLSNNEDNFDLDIQRININGVNFIDPNTVQLHHAGYCF 123
Query: 120 IEFVSHAAAERVL------------QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDF 167
+EF S L ++ N P+ + FRLNWA+ + P++
Sbjct: 124 VEFESQQDVIAALSLNKAVIPNIFSESINLYTNPNGRRTFRLNWASGATLQSLIPATPEY 183
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++F+GDL+ T+ + F+ Y SVK +V+TD G S+G+GF+RF DE E+ ++
Sbjct: 184 SLFIGDLSPLTTEADILSIFQKKYKSVKTVRVMTDPINGSSRGFGFIRFSDEDERKDALE 243
Query: 228 EMNGVLCSTRPMRIGPAA--TKKAATGQQYQKA--------------------------- 258
MNGV+C +R R+ A T K AT +
Sbjct: 244 NMNGVMCHSRYFRLALATPRTNKFATSTNMTQVREDNDGRSNSVTNVHTSPYEQTTTNIN 303
Query: 259 ----------------TYQNTQGSQGEN------DPNNTTIFVGGLDPSVTDDILKTVFG 296
T N+ +N D +NTT+F+GGL S + L+ +F
Sbjct: 304 ISNKFIDKLDVNNFIPTSNNSLQQSAQNIDHVNLDNSNTTVFIGGLSTSTNEYELQVLFE 363
Query: 297 QYGELVHVKIPAGKRCGFVQF 317
+G ++ VKIP GK CGFV+F
Sbjct: 364 PFGNILSVKIPIGKNCGFVKF 384
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 8/108 (7%)
Query: 163 DGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
D + T+F+G L+ +Y LQ F + ++ K+ K GFV+F + E
Sbjct: 338 DNSNTTVFIGGLSTSTNEYELQVLFEP-FGNILSVKIPI------GKNCGFVKFKRKIEA 390
Query: 223 LRSMTEMNGVLCSTRPMRIG-PAATKKAATGQQYQKATYQNTQGSQGE 269
++ M G + + P+R+ + A+T ++ NT S G+
Sbjct: 391 NAAIKGMQGFIINGNPIRLSWGKSNNNASTKLNHKHINIYNTSDSTGD 438
>gi|193636741|ref|XP_001950659.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Acyrthosiphon pisum]
Length = 348
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 111/208 (53%), Gaps = 17/208 (8%)
Query: 52 VPPPSQQTQPYGVAPDA--------SSDG--IRSLWIGDLQPWMEESYIASIFGHTGEFV 101
VPPP+Q + ++P+ S+ G + SLW+G L+P+M ES+I F GE+
Sbjct: 40 VPPPTQTATTF-ISPNVPPVQQPQVSTPGQNVTSLWMGSLEPYMTESFITGAFQKMGEYP 98
Query: 102 SG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR 160
K++RNK T + GY F++F + ++ NG +P T R G +
Sbjct: 99 KNVKLMRNKNTGETAGYAFVDFYDPVS---IMHKLNGKYIPGTNPPVRFKLNHAGNPGKI 155
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
DF++++G+L++DV DY L +TF Y S++ AKVV D + G SKGYGF+RF E
Sbjct: 156 TTSDKDFSVWLGELSSDVDDYQLYKTFACRYQSIRTAKVVLD-SAGYSKGYGFIRFSSEE 214
Query: 221 EQLRSMTEMNGVL-CSTRPMRIGPAATK 247
EQ + MNG T+P+++ K
Sbjct: 215 EQKHCLNNMNGFPGLGTKPIKVSSVIPK 242
>gi|392568189|gb|EIW61363.1| hypothetical protein TRAVEDRAFT_26986 [Trametes versicolor
FP-101664 SS1]
Length = 950
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/264 (34%), Positives = 128/264 (48%), Gaps = 54/264 (20%)
Query: 33 QQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIAS 92
Q+QQHQ TP V P Q Q +P+++ +LW G+L+PWM+E Y
Sbjct: 198 QRQQHQP--------TPLSVQLPPAQPQSLS-SPNSAPSARTTLWWGELEPWMDEEYAKQ 248
Query: 93 IFGHTG-EFVSGKV-------IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQ----M 140
+ G + V KV I +Q N + GY F+ F + + A VLQ N + M
Sbjct: 249 VCTLMGWDPVGIKVPRPAPDAITGQQAN-NPGYCFLTFPTQSHAASVLQQVNTSNAPLIM 307
Query: 141 PSTEQNFRLNWATYGAGERRQDDGP----------------DFTIFVGDLAADVTDYVLQ 184
P++ + F LNWA+ P +++IFVGDLA +V++ L
Sbjct: 308 PNSAKQFSLNWASSVPSAPLPAAMPGQTISIPGVQNPQYPKEYSIFVGDLAPEVSNSDLV 367
Query: 185 ETFRAV---------------YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
FR + S K AK++ D TG S+GYGFVRF DES+Q R++ EM
Sbjct: 368 AVFRNPVLGLRNDREPRFIRPFLSCKSAKIMLDPVTGVSRGYGFVRFTDESDQQRALIEM 427
Query: 230 NGVLCSTRPMRIGPAATK-KAATG 252
+G+ C +RPMRI PA K K A G
Sbjct: 428 HGLYCLSRPMRISPATAKFKPAPG 451
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 4/68 (5%)
Query: 257 KATYQNTQGSQGE----NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+A N G GE +DP NTT+FVGGL P + +D L+T F +GE+ +VK+P GK C
Sbjct: 598 RAILSNLIGPNGEQLTSSDPYNTTVFVGGLSPLINEDTLRTFFAPFGEIHYVKVPVGKHC 657
Query: 313 GFVQFANR 320
GFVQF +
Sbjct: 658 GFVQFVRK 665
>gi|389612022|dbj|BAM19544.1| tRNA selenocysteine associated protein secp43, partial [Papilio
xuthus]
Length = 295
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 103/176 (58%), Gaps = 6/176 (3%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+P M ES+I + F G+ ++ KV+RNK T GY F+ F + A +
Sbjct: 7 LWMGSLEPNMTESFIMAAFHRMGQRPLTVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMHK 66
Query: 135 FNGTQMPST--EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG +P T FRLN A+ A Q + +F+++VGDL+ DV DY L F + YS
Sbjct: 67 LNGKPIPGTFPVVRFRLNTASREARSNLQQE-REFSVWVGDLSPDVDDYSLYRVFASKYS 125
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
S+K AKV+ D TG +KGYGFVRFG+E EQ ++ MNG T+P++I A K
Sbjct: 126 SIKTAKVILD-GTGYTKGYGFVRFGNEEEQRNALYAMNGYSGLGTKPLKICTAVPK 180
>gi|157131106|ref|XP_001655804.1| tRNA selenocysteine associated protein (secp43) [Aedes aegypti]
gi|108871647|gb|EAT35872.1| AAEL011988-PA [Aedes aegypti]
Length = 318
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 104/176 (59%), Gaps = 6/176 (3%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+ +M E++I + F GE + K++RNK T GY F+ F + AA +
Sbjct: 8 LWMGSLESYMTENFILAAFRKMGEDPQTVKLMRNKYTGDPAGYCFVSFKTDEAAIDAMHK 67
Query: 135 FNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG +P T FRLN AT + D +F+++VGDL++DV DY L F A Y+
Sbjct: 68 LNGKPIPGTNPLVRFRLNSATNNQNKALLAD-REFSVWVGDLSSDVDDYSLYRVFSAKYT 126
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
S+K AKV+ D ++G SKGYGFV+FG E EQ ++ EMNG + +P++I A K
Sbjct: 127 SIKTAKVILD-SSGFSKGYGFVKFGLEDEQKSALYEMNGFIGLGCKPLKICNAVPK 181
>gi|115477340|ref|NP_001062266.1| Os08g0520300 [Oryza sativa Japonica Group]
gi|42408523|dbj|BAD09702.1| putative oligouridylate binding protein [Oryza sativa Japonica
Group]
gi|42409171|dbj|BAD10437.1| putative oligouridylate binding protein [Oryza sativa Japonica
Group]
gi|113624235|dbj|BAF24180.1| Os08g0520300 [Oryza sativa Japonica Group]
gi|215697677|dbj|BAG91671.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640879|gb|EEE69011.1| hypothetical protein OsJ_27962 [Oryza sativa Japonica Group]
Length = 447
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 140/291 (48%), Gaps = 38/291 (13%)
Query: 52 VPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQT 111
+ P S P G P RS+++G++ P + ES + +F +G K+IR +++
Sbjct: 55 MEPISNGNLPPGFDPST----CRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKS 110
Query: 112 NFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFV 171
+F GF+++ +A + T +G + Q ++NWA A +R+D F IFV
Sbjct: 111 SF----GFVDYYDRRSAALAIMTLHGRHI--CGQAIKVNWAY--ASTQREDTSGHFHIFV 162
Query: 172 GDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
GDL+++V D L F A Y S A+V+ D TGRS+GYGFV F ++ E ++TEM G
Sbjct: 163 GDLSSEVNDATLYACFSA-YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTG 221
Query: 232 VLCSTRPMRIGPAATKKAATGQQYQKATYQN----TQGSQG----------------END 271
+R +R A A ++ Q+ N T GS EN+
Sbjct: 222 KWLGSRQIRCNWATKNNA---EEKQETDNHNAVVLTNGSSSNPGMEASQDTGSKENPENN 278
Query: 272 PNNTTIFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFANR 320
P+ TT++VG L V D L F G + V++ K GFV+++N
Sbjct: 279 PDCTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQDKGFGFVRYSNH 329
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 81/199 (40%), Gaps = 40/199 (20%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL + ++ + + F +V+ + +T S GYGF+ F + AE +
Sbjct: 160 IFVGDLSSEVNDATLYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 219
Query: 136 NGTQMPSTEQNFRLNWATYGAGERRQD--------------------------------D 163
G + S + R NWAT E +Q+ +
Sbjct: 220 TGKWLGSRQ--IRCNWATKNNAEEKQETDNHNAVVLTNGSSSNPGMEASQDTGSKENPEN 277
Query: 164 GPDFT-IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
PD T ++VG+L +V L F + G + + + KG+GFVR+ + E
Sbjct: 278 NPDCTTVYVGNLGHEVNRDELHRHFYNL-----GVGAIEEVRVQQDKGFGFVRYSNHGEA 332
Query: 223 LRSMTEMNGVLCSTRPMRI 241
++ NG++ +P++
Sbjct: 333 ALAIQMANGLVVRGKPIKC 351
>gi|449447926|ref|XP_004141717.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
gi|449480481|ref|XP_004155906.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 422
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 145/287 (50%), Gaps = 32/287 (11%)
Query: 49 PQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRN 108
PQ P PS P G P RS+++G++ + E + +FG TG S K++R
Sbjct: 34 PQLEPIPSGNLPP-GFDPST----CRSVYVGNVHTQVTEPLLQEVFGSTGLVESCKLVRK 88
Query: 109 KQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT 168
++++ YGFI + +A + + NG + Q ++NWA Y +G+R +D F
Sbjct: 89 EKSS----YGFIHYFDRRSAAMAILSLNGRHL--FGQPIKVNWA-YASGQR-EDTSGHFN 140
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE 228
IFVGDL+ +VTD L F +V+SS A+V+ D+ TGRS+G+GFV F ++ + ++ +
Sbjct: 141 IFVGDLSPEVTDSTLFACF-SVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 199
Query: 229 MNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQG-----------ENDPN 273
+ G +R +R ATK A + Q K+ + T GS EN+P
Sbjct: 200 LTGKWLGSRQIRCN-WATKGAGSNDDKQSSDVKSIAELTNGSSEDGKETVSSDAPENNPQ 258
Query: 274 NTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQFA 318
TT++VG L P T L F G V V+I K GFV+++
Sbjct: 259 YTTVYVGNLAPEATQVDLHRHFHSLGAGVIEEVRIQRDKGFGFVRYS 305
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 84/197 (42%), Gaps = 39/197 (19%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
+ G ++++GDL P + +S + + F +V+ +++T S G+GF+ F + A+
Sbjct: 135 TSGHFNIFVGDLSPEVTDSTLFACFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ 194
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYGAG-------------------------ERRQDDG 164
+ G + S + R NWAT GAG E D
Sbjct: 195 SAINDLTGKWLGSRQ--IRCNWATKGAGSNDDKQSSDVKSIAELTNGSSEDGKETVSSDA 252
Query: 165 PD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDE 219
P+ T++VG+LA + T L F ++ GA V+ + R KG+GFVR+
Sbjct: 253 PENNPQYTTVYVGNLAPEATQVDLHRHFHSL-----GAGVIEEVRIQRDKGFGFVRYSTH 307
Query: 220 SEQLRS--MTEMNGVLC 234
+E + M LC
Sbjct: 308 AEAALAIQMGNTQSFLC 324
>gi|361127946|gb|EHK99901.1| putative Nucleolysin TIA-1 [Glarea lozoyensis 74030]
Length = 505
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 128/268 (47%), Gaps = 27/268 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSE-----GYGFIEFVSHAAA 128
R+L++G L P + E + IF TG K+I +K + YGF+E+ AA
Sbjct: 87 RALYVGGLDPRVTEDVLRQIFETTGHVQHVKIIPDKNVGAEQQAKGFNYGFVEYDDPGAA 146
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
ER +QT NG ++ E R+NWA ++D F IFVGDL+ +V D VL + F
Sbjct: 147 ERAMQTLNGRRVHQAE--IRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFS 204
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
A + SV A+V+ D TGRS+GYGFV F + + ++++ M+G +R +R A K
Sbjct: 205 A-FGSVSEARVMWDMKTGRSRGYGFVAFRERQDAEKALSSMDGEWLGSRAIRCNWANQKG 263
Query: 249 AATGQQYQKATYQN-------------TQGSQG------ENDPNNTTIFVGGLDPSVTDD 289
+ Q Q+ + T G Q + TT +VG L P T +
Sbjct: 264 QPSISQQQQMSAMGMTPTTPFGHHHFPTHGVQSFDMIVQQTPAWQTTCYVGNLTPYTTQN 323
Query: 290 ILKTVFGQYGELVHVKIPAGKRCGFVQF 317
L +F +G +V + A + FV+
Sbjct: 324 DLIPLFQNFGFVVETRFQADRGFAFVKM 351
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFA 318
+PN ++VGGLDP VT+D+L+ +F G + HVKI K G Q A
Sbjct: 83 EPNKRALYVGGLDPRVTEDVLRQIFETTGHVQHVKIIPDKNVGAEQQA 130
>gi|289740797|gb|ADD19146.1| RNA-binding protein ELAV/HU [Glossina morsitans morsitans]
Length = 343
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 119/218 (54%), Gaps = 17/218 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+P+M E++I + F GE + +++RNK T GY F+ F + A +
Sbjct: 9 LWMGSLEPYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFATDEQAMDAMHK 68
Query: 135 FNGTQMPSTE--QNFRLNWATYGA---GERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
NG +P T FRLN A+ G R+ F+++VGDL++DV DY L + F +
Sbjct: 69 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE-----FSVWVGDLSSDVDDYQLYKVFSS 123
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK- 247
Y+S+K AKV+ D ++G SKGYGFVRFG E EQ ++ +MNG + T+P++I A K
Sbjct: 124 KYTSIKTAKVILD-SSGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPKP 182
Query: 248 KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
K G + G G + N +T V G D S
Sbjct: 183 KNELGVALGTTS---NYGYGGSANANTSTTTVSGTDYS 217
>gi|224121456|ref|XP_002330832.1| predicted protein [Populus trichocarpa]
gi|222872634|gb|EEF09765.1| predicted protein [Populus trichocarpa]
Length = 415
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 141/289 (48%), Gaps = 30/289 (10%)
Query: 49 PQPVPPPSQQTQPY---GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKV 105
P V Q +P + P S RS+++G++ + + +A +F G K+
Sbjct: 8 PALVAAAMSQMEPIPGGNLPPGFDSSSCRSVYVGNIHVNVTDKLLAEVFATAGPLAGCKL 67
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
IR +++ YGF+++ ++A + T +G Q+ + ++NWA Y +G+R +D
Sbjct: 68 IRKDKSS----YGFVDYHDRSSAALAIMTLHGRQL--YGEALKVNWA-YASGQR-EDTSG 119
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
F IFVGDL+ +VTD L F +V+ S A+V+ D TGRSKGYGFV F ++ E +
Sbjct: 120 HFHIFVGDLSPEVTDATLYACF-SVFPSCSDARVMWDHKTGRSKGYGFVSFRNQQEAQSA 178
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN----TQGSQG-----------EN 270
+ ++ G R +R ATK + + Q + QN T GS EN
Sbjct: 179 INDLTGKWLGNRQIRCN-WATKGVGSNEDKQNSDNQNAVVLTNGSSAGSQENTNEEAPEN 237
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQF 317
+P TT++VG L VT L F G V V++ K GFV++
Sbjct: 238 NPAYTTVYVGNLSHVVTQAELHGNFHALGAGVIEEVRVQRDKGFGFVRY 286
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 85/196 (43%), Gaps = 37/196 (18%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + ++ + + F +V+ + +T S+GYGF+ F + A+ +
Sbjct: 123 IFVGDLSPEVTDATLYACFSVFPSCSDARVMWDHKTGRSKGYGFVSFRNQQEAQSAINDL 182
Query: 136 NGTQMPSTEQNFRLNWATYGAG-------------------------ERRQDDGPD---- 166
G + + + R NWAT G G E ++ P+
Sbjct: 183 TGKWLGNRQ--IRCNWATKGVGSNEDKQNSDNQNAVVLTNGSSAGSQENTNEEAPENNPA 240
Query: 167 -FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
T++VG+L+ VT L F A+ GA V+ + R KG+GFVR+ E +
Sbjct: 241 YTTVYVGNLSHVVTQAELHGNFHAL-----GAGVIEEVRVQRDKGFGFVRYNTHEEAAFA 295
Query: 226 MTEMNGVLCSTRPMRI 241
+ NG + +PM+
Sbjct: 296 IQMGNGKIVCGKPMKC 311
>gi|312371659|gb|EFR19788.1| hypothetical protein AND_21810 [Anopheles darlingi]
Length = 440
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 129/258 (50%), Gaps = 24/258 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++F G S K+IR ++ Y FIE+ SH +A+ L
Sbjct: 8 KTLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIREAS---NDPYAFIEYASHTSAQTALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N E ++NWAT + + D + IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRFFLKKE--IKVNWATSPGNQPKTDTSQHYHIFVGDLSPEIETETLREAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG-----PAATKK 248
+ ++V D T +S+GY FV F ++E ++ MNG +R +R P A +
Sbjct: 122 ISNCRIVRDPQTLKSRGYAFVSFVKKAEAENAIQMMNGQWLGSRSIRTNWSTRKPPAPRD 181
Query: 249 AATGQQYQKA-----TYQNTQGSQGENDPNNTTIFVGGLDP-SVTDDILKTVFGQYGELV 302
+ G + K Y NT P NTT++ GG P ++TD++++ F Q+G++
Sbjct: 182 NSKGIKSGKTPGFEEIYNNT-------SPTNTTVYCGGFPPNTITDELIQKHFAQFGQIH 234
Query: 303 HVKIPAGKRCGFVQFANR 320
++ K F++FAN+
Sbjct: 235 DTRVFKDKGYAFIRFANK 252
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 29/171 (16%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P +E + F GE + +++R+ QT S GY F+ FV A AE +Q
Sbjct: 98 IFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSRGYAFVSFVKKAEAENAIQMM 157
Query: 136 NGTQMPSTEQNFRLNWATY------------------GAGERRQDDGP-DFTIFVGDLAA 176
NG + S ++ R NW+T G E + P + T++ G
Sbjct: 158 NGQWLGS--RSIRTNWSTRKPPAPRDNSKGIKSGKTPGFEEIYNNTSPTNTTVYCGGFPP 215
Query: 177 D-VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
+ +TD ++Q+ F A + + +V D KGY F+RF ++ R++
Sbjct: 216 NTITDELIQKHF-AQFGQIHDTRVFKD------KGYAFIRFANKESAARAI 259
>gi|297850132|ref|XP_002892947.1| hypothetical protein ARALYDRAFT_889143 [Arabidopsis lyrata subsp.
lyrata]
gi|297338789|gb|EFH69206.1| hypothetical protein ARALYDRAFT_889143 [Arabidopsis lyrata subsp.
lyrata]
Length = 419
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 147/290 (50%), Gaps = 28/290 (9%)
Query: 47 WTPQPVPPPSQQTQPYG-VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKV 105
+ P + PP + P G + P RS+++G++ + E + +F TG S K+
Sbjct: 26 YHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHIQVTEPLLQEVFASTGPVESCKL 85
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
IR ++++ YGF+ + +A + + NG + Q ++NWA Y +G+R +D
Sbjct: 86 IRKEKSS----YGFVHYFDRRSAGLAILSLNGRHL--FGQPIKVNWA-YASGQR-EDTSS 137
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
F IFVGDL+ +VTD +L F +VY S A+V+ D+ TGRS+G+GFV F ++ + +
Sbjct: 138 HFNIFVGDLSPEVTDAMLFNCF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTA 196
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN---------------TQGSQGEN 270
+ E+ G +R +R ATK A +G+ Q + ++ T G EN
Sbjct: 197 IDEITGKWLGSRQIRCN-WATKGATSGEDKQSSDSKSVVELTSGVSEDGKDTTNGEAPEN 255
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQFA 318
+ TT++VG L P V+ L F G V V++ K GFV+++
Sbjct: 256 NAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYS 305
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 37/186 (19%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++GDL P + ++ + + F +V+ +++T S G+GF+ F + A+ +
Sbjct: 140 NIFVGDLSPEVTDAMLFNCFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDE 199
Query: 135 FNGTQMPSTEQNFRLNWATYGA--GERRQ---------------DDGPDFT--------- 168
G + S + R NWAT GA GE +Q +DG D T
Sbjct: 200 ITGKWLGSRQ--IRCNWATKGATSGEDKQSSDSKSVVELTSGVSEDGKDTTNGEAPENNA 257
Query: 169 ----IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLR 224
++VG+LA +V+ L F ++ GA V+ + R KG+GFVR+ E
Sbjct: 258 QYTTVYVGNLAPEVSQVDLHRHFHSL-----GAGVIEEVRVQRDKGFGFVRYSTHVEAAL 312
Query: 225 SMTEMN 230
+++ N
Sbjct: 313 AISMGN 318
>gi|255647186|gb|ACU24061.1| unknown [Glycine max]
Length = 435
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 130/269 (48%), Gaps = 26/269 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P + RS+++G++ + + +A +F G K+IR ++++ YGF+++
Sbjct: 48 PGFDTSACRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKEKSS----YGFVDYHDR 103
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A+A + T +G Q+ Q ++NWA A R+D F IFVGDL+ +VTD L
Sbjct: 104 ASAALAIMTLHGRQL--YGQALKVNWAY--ANSSREDTTGHFNIFVGDLSPEVTDATLFA 159
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F +VY S A+V+ D TGRSKGYGFV F D + ++ +M G R +R A
Sbjct: 160 CF-SVYPSCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIRCNWAT 218
Query: 246 TKKAATGQQYQKATYQN----TQGSQG-----------ENDPNNTTIFVGGLDPSVTDDI 290
+ + + QN T GS EN+P+ TT++VG L VT
Sbjct: 219 KGAGGSSNEEKNNDSQNAVMLTNGSSDGGQDNNNEDAPENNPSYTTVYVGNLPHDVTQAE 278
Query: 291 LKTVFGQYGELV--HVKIPAGKRCGFVQF 317
L F G V V++ K GF+++
Sbjct: 279 LHCQFHALGAGVIEEVRVQRDKGFGFIRY 307
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 38/201 (18%)
Query: 72 GIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
G ++++GDL P + ++ + + F +V+ + +T S+GYGF+ F H A+
Sbjct: 139 GHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSA 198
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAG--------------------------ERRQDDGP 165
+ G + + + R NWAT GAG + +D P
Sbjct: 199 INDMTGKWLGNRQ--IRCNWATKGAGGSSNEEKNNDSQNAVMLTNGSSDGGQDNNNEDAP 256
Query: 166 D-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+ T++VG+L DVT L F A+ GA V+ + R KG+GF+R+
Sbjct: 257 ENNPSYTTVYVGNLPHDVTQAELHCQFHAL-----GAGVIEEVRVQRDKGFGFIRYNTHD 311
Query: 221 EQLRSMTEMNGVLCSTRPMRI 241
E ++ NG L + M+
Sbjct: 312 EAALAIQMANGRLVRGKNMKC 332
>gi|356515545|ref|XP_003526460.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 435
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 130/269 (48%), Gaps = 26/269 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P + RS+++G++ + + +A +F G K+IR ++++ YGF+++
Sbjct: 48 PGFDTSACRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKEKSS----YGFVDYHDR 103
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A+A + T +G Q+ Q ++NWA A R+D F IFVGDL+ +VTD L
Sbjct: 104 ASAALAIMTLHGRQL--YGQALKVNWAY--ANSSREDTTGHFNIFVGDLSPEVTDATLFA 159
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F +VY S A+V+ D TGRSKGYGFV F D + ++ +M G R +R A
Sbjct: 160 CF-SVYPSCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIRCNWAT 218
Query: 246 TKKAATGQQYQKATYQN----TQGSQG-----------ENDPNNTTIFVGGLDPSVTDDI 290
+ + + QN T GS EN+P+ TT++VG L VT
Sbjct: 219 KGAGGSSNEEKNNDSQNAVMLTNGSSDGGQDNNNEDAPENNPSYTTVYVGNLPHDVTQAE 278
Query: 291 LKTVFGQYGELV--HVKIPAGKRCGFVQF 317
L F G V V++ K GF+++
Sbjct: 279 LHCQFHALGAGVIEEVRVQRDKGFGFIRY 307
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 38/198 (19%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++GDL P + ++ + + F +V+ + +T S+GYGF+ F H A+ +
Sbjct: 142 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAIND 201
Query: 135 FNGTQMPSTEQNFRLNWATYGAG--------------------------ERRQDDGPD-- 166
G + + + R NWAT GAG + +D P+
Sbjct: 202 MTGKWLGNRQ--IRCNWATKGAGGSSNEEKNNDSQNAVMLTNGSSDGGQDNNNEDAPENN 259
Query: 167 ---FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQL 223
T++VG+L DVT L F A+ GA V+ + R KG+GF+R+ E
Sbjct: 260 PSYTTVYVGNLPHDVTQAELHCQFHAL-----GAGVIEEVRVQRDKGFGFIRYNTHDEAA 314
Query: 224 RSMTEMNGVLCSTRPMRI 241
++ NG L + M+
Sbjct: 315 LAIQMANGRLVRGKNMKC 332
>gi|341900388|gb|EGT56323.1| CBN-TIAR-1 protein [Caenorhabditis brenneri]
Length = 399
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 132/254 (51%), Gaps = 13/254 (5%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
SD R+L++G+L P + E ++A++F G KVI + ++ Y F+EF HA A
Sbjct: 38 SDEPRTLYVGNLDPTVSEDFVATLFNQIGSVTKTKVIFDGA---NDPYAFVEFSDHAQAS 94
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATY-GAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
+ LQT N + E ++NWA G + D F +FVGDL+++V + L+E F+
Sbjct: 95 QALQTMNKRLLLDRE--MKVNWAVEPGQQPSKIDTTRHFHVFVGDLSSEVDNQKLREAFQ 152
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ V AKV+ D T +SKGYGFV + E R++ +MNG R +R A K
Sbjct: 153 P-FGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK- 210
Query: 249 AATGQQYQKATYQNTQGSQGENDP--NNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
G Q + Y + N +NT+++VG + +++++ ++ F YG + V+I
Sbjct: 211 --PGDQEKPVHYNEKSYDEIYNQTSGDNTSVYVGNI-ANLSEEDIRQAFASYGRISEVRI 267
Query: 307 PAGKRCGFVQFANR 320
+ FV+F N+
Sbjct: 268 FKMQGYAFVKFDNK 281
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 86/182 (47%), Gaps = 32/182 (17%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL ++ + F G+ KVIR+ T S+GYGF+ + AER ++
Sbjct: 133 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 192
Query: 136 NGTQMPSTEQNFRLNWATYGAGERR---------------QDDGPDFTIFVGDLAADVTD 180
NG + + R NWAT G++ Q G + +++VG++ A++++
Sbjct: 193 NGQWLG--RRTIRTNWATRKPGDQEKPVHYNEKSYDEIYNQTSGDNTSVYVGNI-ANLSE 249
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG-------VL 233
+++ F A Y + ++ + +GY FV+F ++ +++ +MN V
Sbjct: 250 EDIRQAF-ASYGRISEVRIF------KMQGYAFVKFDNKDAAAKAIVQMNNQEVGGQLVR 302
Query: 234 CS 235
CS
Sbjct: 303 CS 304
>gi|340905400|gb|EGS17768.1| putative polyadenylated RNA protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 485
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 129/263 (49%), Gaps = 23/263 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G L P + E + IF TG S K+I +K + YGF+E+ AAER +Q
Sbjct: 93 RALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDK-NHRGYNYGFVEYDDPGAAERAMQ 151
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ E R+NWA ++D F IFVGDL+ +V D VL + F A + S
Sbjct: 152 TLNGRRVHQNE--IRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLWQAFSA-FGS 208
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+V+ D TGRS+GYGFV F + ++ ++++ M+G +R +R A K +
Sbjct: 209 ISEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIH 268
Query: 254 QYQKATYQN-------------TQGSQGENDPNN------TTIFVGGLDPSVTDDILKTV 294
Q Q T G + N TT +VG L P T + L +
Sbjct: 269 QQQAMQQMGMTPTTPYGHHHFPTHGIHSYDMVVNQTPAWQTTCYVGNLTPYTTQNDLVPL 328
Query: 295 FGQYGELVHVKIPAGKRCGFVQF 317
F +G +V ++ A + F++
Sbjct: 329 FQNFGYVVECRMQADRGFAFIKM 351
>gi|194766221|ref|XP_001965223.1| GF24033 [Drosophila ananassae]
gi|190617833|gb|EDV33357.1| GF24033 [Drosophila ananassae]
Length = 339
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 106/182 (58%), Gaps = 13/182 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+ +M E++I + F GE + +++RNK T GY F+ F+S A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 135 FNGTQMPSTE--QNFRLNWATYGA---GERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
NG +P T FRLN A+ G R+ F+++VGDL++DV DY L + F +
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE-----FSVWVGDLSSDVDDYQLYKVFSS 122
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKK 248
++S+K AKV+ D + G SKGYGFVRFG E EQ +M +MNG + TRP++I A K
Sbjct: 123 KFTSIKTAKVILD-SLGFSKGYGFVRFGIEDEQKTAMYDMNGYIGLGTRPIKICNAVPKP 181
Query: 249 AA 250
A
Sbjct: 182 KA 183
>gi|299755830|ref|XP_001828914.2| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
gi|298411401|gb|EAU92921.2| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
Length = 433
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 138/275 (50%), Gaps = 24/275 (8%)
Query: 61 PYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---Y 117
P G+ A + L++G+L P + E + IF G K+I ++ N+ G Y
Sbjct: 3 PMGMGGAAEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNY 60
Query: 118 GFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAAD 177
GF+E++ AAE LQT NG ++ TE R+NWA Y + ++D + +FVGDL+ +
Sbjct: 61 GFVEYMDMRAAETALQTLNGRKIFDTE--IRVNWA-YQGQQNKEDTSGHYHVFVGDLSPE 117
Query: 178 VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTR 237
V D VL + F A + ++ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +R
Sbjct: 118 VNDEVLGKAFSA-FGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSR 176
Query: 238 PMRIGPAATK-----------KAATGQQYQKATYQ----NTQGSQGENDPNNTTIFVGGL 282
+R+ A K +A G +Q + + P NTT++VG L
Sbjct: 177 AIRVNWANQKTQGGAPGGGARPSAGGGAPAPVNFQGGPLTYEQVLAQTAPYNTTVYVGNL 236
Query: 283 DPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
P T L +F G L +++ A + FV+
Sbjct: 237 VPYTTQADLIPLFQSIGYLSEIRMQADRGFAFVKL 271
>gi|255642249|gb|ACU21389.1| unknown [Glycine max]
Length = 452
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 131/271 (48%), Gaps = 26/271 (9%)
Query: 64 VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFV 123
V P + RS+++G++ + + +A +F G K+IR ++++ YGF+++
Sbjct: 45 VPPGFDTSACRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKEKSS----YGFVDYH 100
Query: 124 SHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
A+A + T +G Q+ Q ++NWA A R+D F IFVGDL+ +VTD L
Sbjct: 101 DRASAALAIMTLHGRQL--YGQALKVNWAY--ANSSREDTSGHFNIFVGDLSPEVTDATL 156
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
F +VY S A+V+ D TGRSKGYGFV F D + ++ +M G R +R
Sbjct: 157 FACF-SVYPSCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIRCNW 215
Query: 244 AATKKAATGQQYQKATYQN----TQGSQG-----------ENDPNNTTIFVGGLDPSVTD 288
A + + + QN T GS +N+P+ TT++VG L VT
Sbjct: 216 ATKGAGGSSNEEKINDSQNAVVLTNGSSDGGQDNNNEDAPDNNPSYTTVYVGNLPHDVTQ 275
Query: 289 DILKTVFGQYGELV--HVKIPAGKRCGFVQF 317
L F G V V++ K GFV++
Sbjct: 276 AELHCQFHALGAGVIEEVRVQRDKGFGFVRY 306
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 38/203 (18%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
+ G ++++GDL P + ++ + + F +V+ + +T S+GYGF+ F H A+
Sbjct: 136 TSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDHKTGRSKGYGFVSFRDHQDAQ 195
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYGAG--------------------------ERRQDD 163
+ G + + + R NWAT GAG + +D
Sbjct: 196 SAINDMTGKWLGNRQ--IRCNWATKGAGGSSNEEKINDSQNAVVLTNGSSDGGQDNNNED 253
Query: 164 GPD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGD 218
PD T++VG+L DVT L F A+ GA V+ + R KG+GFVR+
Sbjct: 254 APDNNPSYTTVYVGNLPHDVTQAELHCQFHAL-----GAGVIEEVRVQRDKGFGFVRYNT 308
Query: 219 ESEQLRSMTEMNGVLCSTRPMRI 241
E ++ NG L + M+
Sbjct: 309 HDEAALAIQMANGRLVRGKNMKC 331
>gi|17531965|ref|NP_495121.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
gi|373219010|emb|CCD65015.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
Length = 408
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 132/254 (51%), Gaps = 13/254 (5%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
SD R+L++G+L + E +IA++F G KVI + ++ Y F+EF H A
Sbjct: 42 SDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGS---NDPYAFVEFSDHGQAS 98
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATY-GAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
+ LQT N + E ++NWA G + + D F +FVGDL+++V + L+E F+
Sbjct: 99 QALQTMNKRLLLDRE--MKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQ 156
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ V AKV+ D T +SKGYGFV + E R++ +MNG R +R A K
Sbjct: 157 P-FGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKP 215
Query: 249 AATGQQYQKATYQNTQGSQGENDP--NNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
G Q + + Y + N +NT+++VG + S+T+D ++ F +G + V+I
Sbjct: 216 ---GDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNI-ASLTEDEIRQGFASFGRITEVRI 271
Query: 307 PAGKRCGFVQFANR 320
+ FV+F N+
Sbjct: 272 FKMQGYAFVKFDNK 285
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 82/182 (45%), Gaps = 32/182 (17%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL ++ + F G+ KVIR+ T S+GYGF+ + AER ++
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196
Query: 136 NGTQMPSTEQNFRLNWATYGAGER---------------RQDDGPDFTIFVGDLAADVTD 180
NG + + R NWAT G++ Q G + +++VG++A+ D
Sbjct: 197 NGQWLG--RRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTED 254
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG-------VL 233
+ Q A + + ++ + +GY FV+F ++ +++ +MN V
Sbjct: 255 EIRQGF--ASFGRITEVRIF------KMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVR 306
Query: 234 CS 235
CS
Sbjct: 307 CS 308
>gi|189239005|ref|XP_974444.2| PREDICTED: similar to tRNA selenocysteine associated protein
(secp43) [Tribolium castaneum]
Length = 299
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 104/176 (59%), Gaps = 8/176 (4%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+P+M E++I S F GE ++ KV+RNK T + GY F+ F + A +
Sbjct: 14 LWMGSLEPYMTETFIISAFRKMGENPLNVKVMRNKFTGEAAGYCFVHFANDEEAIDAMHK 73
Query: 135 FNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG +P T FRLN A+ G D +F+++VGDL+ DV DY L F + Y+
Sbjct: 74 LNGKPIPGTTPVVRFRLNNAS-NTGRTLLD--REFSVWVGDLSPDVDDYNLYRVFSSKYN 130
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
++K AKV+ D ++G SKGYGFVRFG E E S+T MNG + T+ ++I A K
Sbjct: 131 TIKTAKVILD-SSGFSKGYGFVRFGSEDEMRDSLTTMNGYIGLGTKALKICNAVPK 185
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+W+GDL P +++ + +F + + KVI + + FS+GYGF+ F S L
Sbjct: 106 SVWVGDLSPDVDDYNLYRVFSSKYNTIKTAKVILD-SSGFSKGYGFVRFGSEDEMRDSLT 164
Query: 134 TFNG 137
T NG
Sbjct: 165 TMNG 168
>gi|168027692|ref|XP_001766363.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682272|gb|EDQ68691.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 397
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 145/292 (49%), Gaps = 30/292 (10%)
Query: 42 PPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFV 101
P + PQ P PS P DA+S RS+++G++ + E+ +A +F + G
Sbjct: 29 PGLLATIPQMEPLPSGNLPP---GFDATS--CRSVYVGNIHTKVTEALLAEVFSNIGPLE 83
Query: 102 SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQ 161
K+IR ++++ YGF++++ H A L T NG + Q ++NWA Y +G+R
Sbjct: 84 GCKLIRKEKSS----YGFVDYLDHIYAAVALTTLNGRLIFG--QPIKVNWA-YASGQRED 136
Query: 162 DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
G + +FVGDL+ +VTD L F VY S A+V+ D+ +GRS+G+GFV F + E
Sbjct: 137 TTG-HYNVFVGDLSPEVTDATLFAAF-CVYPSCSDARVMWDQRSGRSRGFGFVSFRSQQE 194
Query: 222 QLRSMTEMNGVLCSTRPMRIGPAA-TKKAATGQQYQKATY----------QNTQGSQG-- 268
+++EM G TR +R A T +A+ + + +GS G
Sbjct: 195 AENAISEMTGKWLGTRSIRCNWATKTNSSASADETNNGGHAVGMNDSKSEDRPEGSAGDG 254
Query: 269 -ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQF 317
EN+P TT++VG L V L F G V V++ K GFV++
Sbjct: 255 PENNPQYTTVYVGNLAHEVNQGELHRWFHCMGAGVIEDVRVQKDKGFGFVRY 306
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 38/194 (19%)
Query: 72 GIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
G ++++GDL P + ++ + + F +V+ ++++ S G+GF+ F S AE
Sbjct: 139 GHYNVFVGDLSPEVTDATLFAAFCVYPSCSDARVMWDQRSGRSRGFGFVSFRSQQEAENA 198
Query: 132 LQTFNGTQMPSTEQNFRLNWAT-----------------YGAGERRQDDGPD-------- 166
+ G + + ++ R NWAT G + + +D P+
Sbjct: 199 ISEMTGKWLGT--RSIRCNWATKTNSSASADETNNGGHAVGMNDSKSEDRPEGSAGDGPE 256
Query: 167 -----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
T++VG+LA +V L F + GA V+ D + KG+GFVR+ E
Sbjct: 257 NNPQYTTVYVGNLAHEVNQGELHRWFHCM-----GAGVIEDVRVQKDKGFGFVRYRTHEE 311
Query: 222 QLRSMTEMNG-VLC 234
++ NG VLC
Sbjct: 312 AALAIQAANGRVLC 325
>gi|112983244|ref|NP_001037608.1| tRNA selenocysteine 1-associated protein 1 [Bombyx mori]
gi|102269199|gb|ABF55965.2| CG15440-like protein [Bombyx mori]
Length = 214
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 102/176 (57%), Gaps = 6/176 (3%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+P M ES+I + F G+ ++ KV+RNK T GY F+ F + A +
Sbjct: 12 LWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMHK 71
Query: 135 FNGTQMPST--EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG +P T FRLN A+ Q + +F+++VGDL+ DV DY L F + Y+
Sbjct: 72 LNGKPIPGTFPVVRFRLNTASRETRANMQHER-EFSVWVGDLSPDVDDYSLYRVFASKYT 130
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
S+K AKV+ D +G +KGYGFVRFG+E EQ ++ MNG T+P++I A K
Sbjct: 131 SIKTAKVILD-NSGYTKGYGFVRFGNEDEQRNALYAMNGYCGLGTKPLKICTAVPK 185
>gi|66802614|ref|XP_635179.1| RNA recognition motif RNP-1 domain-containing protein
[Dictyostelium discoideum AX4]
gi|60463492|gb|EAL61677.1| RNA recognition motif RNP-1 domain-containing protein
[Dictyostelium discoideum AX4]
Length = 463
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 93/155 (60%), Gaps = 8/155 (5%)
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
D ++++GDLA DVTD L F+ Y SV+ A+V+ D TG S+GYGFV+F + E+ ++
Sbjct: 112 DLSLYIGDLATDVTDQQLMNAFQGRYPSVRSARVIMDSATGISRGYGFVKFASDVEKDKA 171
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
+ +MNG + +P+++ K+ + Q +T + + DPNNT I+V LD
Sbjct: 172 LIDMNGFYINNKPIKVNNPTHKRLNS----QTSTIPDLTST----DPNNTAIYVSQLDHY 223
Query: 286 VTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
+ + +L+T+FG YGE+ ++K+ K FV F NR
Sbjct: 224 IDEGVLQTIFGAYGEISYIKMLTNKFSAFVNFVNR 258
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
SD SL+IGDL + + + + F G S +VI + T S GYGF++F S
Sbjct: 109 SDSDLSLYIGDLATDVTDQQLMNAFQGRYPSVRSARVIMDSATGISRGYGFVKFASDVEK 168
Query: 129 ERVLQTFNG---TQMPSTEQN---FRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYV 182
++ L NG P N RLN T + D + I+V L + + V
Sbjct: 169 DKALIDMNGFYINNKPIKVNNPTHKRLNSQTSTIPDLTSTDPNNTAIYVSQLDHYIDEGV 228
Query: 183 LQETFRAVYSSVKGAKVVTDR 203
LQ F A Y + K++T++
Sbjct: 229 LQTIFGA-YGEISYIKMLTNK 248
>gi|384247365|gb|EIE20852.1| hypothetical protein COCSUDRAFT_4708, partial [Coccomyxa
subellipsoidea C-169]
Length = 264
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 125/245 (51%), Gaps = 15/245 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L P++ E+ + IF G ++++++ T S G F++F H AA L+
Sbjct: 5 KALYVGNLHPYVNEAVLQDIFSTLGTVSEVRIVKDRATGNSAGSAFVKFEDHQAAAIALK 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG + + E R+ WA E+ ++ IFVG+L+ DV D VL + F+ +
Sbjct: 65 TINGRILYNKE--VRIQWAF--QKEKTENTASHSHIFVGNLSGDVADPVLLQAFQHL-GE 119
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK-KAATG 252
A+V+ D +TGRSKG+GFV F + +++ EM+G +R G A K +A TG
Sbjct: 120 CSDARVMWDHSTGRSKGFGFVSFRTKEAAEKALAEMDGAQVGQWKIRCGWAHHKTEAVTG 179
Query: 253 QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
DP NT ++VG L V ++ L+ FG YGE+ +K
Sbjct: 180 LDIDTVD---------RADPANTNVYVGNLPTEVMEEDLRAAFGAYGEITGLKPCHKGGY 230
Query: 313 GFVQF 317
GFV +
Sbjct: 231 GFVTY 235
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++G+L + + + F H GE +V+ + T S+G+GF+ F + AAE+ L
Sbjct: 96 IFVGNLSGDVADPVLLQAFQHLGECSDARVMWDHSTGRSKGFGFVSFRTKEAAEKALAEM 155
Query: 136 NGTQMPSTEQNFRLNWATY------GAGERRQD--DGPDFTIFVGDLAADVTDYVLQETF 187
+G Q+ + R WA + G D D + ++VG+L +V + L+ F
Sbjct: 156 DGAQVG--QWKIRCGWAHHKTEAVTGLDIDTVDRADPANTNVYVGNLPTEVMEEDLRAAF 213
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
A Y + G K GYGFV + D S ++++ MNG
Sbjct: 214 GA-YGEITGLKPC------HKGGYGFVTYRDHSAAVQAIVGMNG 250
>gi|270010282|gb|EFA06730.1| hypothetical protein TcasGA2_TC009661 [Tribolium castaneum]
Length = 294
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 104/176 (59%), Gaps = 8/176 (4%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+P+M E++I S F GE ++ KV+RNK T + GY F+ F + A +
Sbjct: 9 LWMGSLEPYMTETFIISAFRKMGENPLNVKVMRNKFTGEAAGYCFVHFANDEEAIDAMHK 68
Query: 135 FNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG +P T FRLN A+ G D +F+++VGDL+ DV DY L F + Y+
Sbjct: 69 LNGKPIPGTTPVVRFRLNNAS-NTGRTLLD--REFSVWVGDLSPDVDDYNLYRVFSSKYN 125
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
++K AKV+ D ++G SKGYGFVRFG E E S+T MNG + T+ ++I A K
Sbjct: 126 TIKTAKVILD-SSGFSKGYGFVRFGSEDEMRDSLTTMNGYIGLGTKALKICNAVPK 180
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+W+GDL P +++ + +F + + KVI + + FS+GYGF+ F S L
Sbjct: 101 SVWVGDLSPDVDDYNLYRVFSSKYNTIKTAKVILD-SSGFSKGYGFVRFGSEDEMRDSLT 159
Query: 134 TFNG 137
T NG
Sbjct: 160 TMNG 163
>gi|186478580|ref|NP_001117301.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
gi|332191459|gb|AEE29580.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
Length = 416
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 147/287 (51%), Gaps = 25/287 (8%)
Query: 47 WTPQPVPPPSQQTQPYG-VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKV 105
+ P + PP + P G + P RS+++G++ + E + +F TG S K+
Sbjct: 26 YHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHIQVTEPLLQEVFAGTGPVESCKL 85
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
IR ++++ YGF+ + +A + + NG + Q ++NWA Y +G+R +D
Sbjct: 86 IRKEKSS----YGFVHYFDRRSAGLAILSLNGRHLFG--QPIKVNWA-YASGQR-EDTSS 137
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
F IFVGDL+ +VTD +L F +VY + A+V+ D+ TGRS+G+GFV F ++ + +
Sbjct: 138 HFNIFVGDLSPEVTDAMLFTCF-SVYPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTA 196
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN------------TQGSQGENDPN 273
+ E+ G +R +R ATK A +G+ Q + ++ T G EN+
Sbjct: 197 IDEITGKWLGSRQIRCN-WATKGATSGEDKQSSDSKSVVELTSGDGKDTTNGEAPENNAQ 255
Query: 274 NTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQFA 318
TT++VG L P V+ L F G V V++ K GFV+++
Sbjct: 256 YTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYS 302
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 34/174 (19%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++GDL P + ++ + + F +V+ +++T S G+GF+ F + A+ +
Sbjct: 140 NIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDE 199
Query: 135 FNGTQMPSTEQNFRLNWATYGA--GERRQD------------DGPDFT------------ 168
G + S + R NWAT GA GE +Q DG D T
Sbjct: 200 ITGKWLGS--RQIRCNWATKGATSGEDKQSSDSKSVVELTSGDGKDTTNGEAPENNAQYT 257
Query: 169 -IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
++VG+LA +V+ L F ++ GA V+ + R KG+GFVR+ E
Sbjct: 258 TVYVGNLAPEVSQVDLHRHFHSL-----GAGVIEEVRVQRDKGFGFVRYSTHVE 306
>gi|56755515|gb|AAW25936.1| SJCHGC05387 protein [Schistosoma japonicum]
Length = 348
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 104/178 (58%), Gaps = 9/178 (5%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGE-FVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
++W+GDL+P+M+E +I F +GE VS KVIRNK T + GYGFIEF + +A +
Sbjct: 6 HTIWMGDLEPYMDEMFIKRAFETSGENIVSVKVIRNKATGQTLGYGFIEFANSTSARDAM 65
Query: 133 QTFNGTQMPST-EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + F+LN A+YG + + ++FVG+L DV D L F+ Y
Sbjct: 66 LKLNGKLIPGAPTRRFKLNHASYGKDSTSSN---ECSLFVGELTEDVDDLALFNAFKK-Y 121
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM-NGVLCSTRPMRIGPAATKK 248
+ + AKVV T G+S+GYGFVRF ES+ +++ EM N +P+R+ A K+
Sbjct: 122 PTCRSAKVVM--TNGKSRGYGFVRFLTESDMDKALIEMQNYCGLGYKPIRVSLAIPKR 177
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 24/156 (15%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
TI++GDL + + ++ F ++ KV+ ++ TG++ GYGF+ F + + +M
Sbjct: 7 TIWMGDLEPYMDEMFIKRAFETSGENIVSVKVIRNKATGQTLGYGFIEFANSTSARDAML 66
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEN--DPNNTTIFVGGLDPS 285
++NG L P R ++ S G++ N ++FVG L
Sbjct: 67 KLNGKLIPGAPTR------------------RFKLNHASYGKDSTSSNECSLFVGELTED 108
Query: 286 VTDDILKTVFGQYGELVHVKIPA----GKRCGFVQF 317
V D L F +Y K+ + GFV+F
Sbjct: 109 VDDLALFNAFKKYPTCRSAKVVMTNGKSRGYGFVRF 144
>gi|327357360|gb|EGE86217.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Ajellomyces dermatitidis ATCC 18188]
Length = 492
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 126/263 (47%), Gaps = 23/263 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L+IG L + E + IF TG S K+I +K + YGF+E+ AAER +
Sbjct: 92 RALYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNSK-GLNYGFVEYDDPGAAERAMA 150
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A + S
Sbjct: 151 TLNGRRVHQSE--IRVNWAYQSNNSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 207
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V A+V+ D TGRS+GYGFV F + + ++++ M+G +R +R A K +
Sbjct: 208 VSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 267
Query: 254 QYQKATYQN-------------TQGSQ------GENDPNNTTIFVGGLDPSVTDDILKTV 294
Q Q T G Q + TT +VG L P T + L +
Sbjct: 268 QQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVAAQTPQWQTTCYVGNLTPYTTQNDLIPL 327
Query: 295 FGQYGELVHVKIPAGKRCGFVQF 317
F +G +V + A + FV+
Sbjct: 328 FQNFGYVVETRFQADRGFAFVKM 350
>gi|291231285|ref|XP_002735593.1| PREDICTED: TIA-1 related protein-like [Saccoglossus kowalevskii]
Length = 409
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 126/244 (51%), Gaps = 7/244 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E++I +FG G S K+I N + Y F+EFV H+ A LQ
Sbjct: 14 RTLYVGNLDRQVTEAFILQLFGQIGPCKSCKMIAEHGGN--DPYCFVEFVEHSHAAAALQ 71
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG + E ++NWAT ++D +FVGDL+++V L+ F A +
Sbjct: 72 TMNGRMILGKE--VKVNWAT-TPSSMKKDTSNHHHVFVGDLSSEVDTPDLKAAF-APFGQ 127
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D T +SKGYGFV F ++ + ++ MNG S R +R AT+K +
Sbjct: 128 ISDARVVKDLQTNKSKGYGFVSFLNKVDAENAIQGMNGQWLSGRAIRTN-WATRKPPPPR 186
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
Q + + + NTT+++GG+ +T+ ++ F YG + V+I K
Sbjct: 187 QPETTKQLSYDDVCNSSSYTNTTVYIGGVTTGLTEGKMRETFSHYGHIQEVRIFPDKGYA 246
Query: 314 FVQF 317
F++F
Sbjct: 247 FIRF 250
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 26/188 (13%)
Query: 59 TQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYG 118
T P + D S+ +++GDL ++ + + F G+ +V+++ QTN S+GYG
Sbjct: 89 TTPSSMKKDTSNH--HHVFVGDLSSEVDTPDLKAAFAPFGQISDARVVKDLQTNKSKGYG 146
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQ---------DDG----- 164
F+ F++ AE +Q NG + + + R NWAT RQ DD
Sbjct: 147 FVSFLNKVDAENAIQGMNGQWL--SGRAIRTNWATRKPPPPRQPETTKQLSYDDVCNSSS 204
Query: 165 -PDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQL 223
+ T+++G + +T+ ++ETF + Y ++ ++ D KGY F+RF
Sbjct: 205 YTNTTVYIGGVTTGLTEGKMRETF-SHYGHIQEVRIFPD------KGYAFIRFMTHESAA 257
Query: 224 RSMTEMNG 231
++ +NG
Sbjct: 258 HAIVSVNG 265
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 26/171 (15%)
Query: 156 AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVR 215
A + DD T++VG+L VT+ + + F + K K++ + G + Y FV
Sbjct: 3 ANQYFDDDALPRTLYVGNLDRQVTEAFILQLFGQI-GPCKSCKMIAEH--GGNDPYCFVE 59
Query: 216 FGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNT 275
F + S ++ MNG + + +++ A T S ++ N+
Sbjct: 60 FVEHSHAAAALQTMNGRMILGKEVKVNWATTPS-----------------SMKKDTSNHH 102
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKI------PAGKRCGFVQFANR 320
+FVG L V LK F +G++ ++ K GFV F N+
Sbjct: 103 HVFVGDLSSEVDTPDLKAAFAPFGQISDARVVKDLQTNKSKGYGFVSFLNK 153
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 10/98 (10%)
Query: 47 WTPQPVPPPSQ----QTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVS 102
W + PPP Q + Y ++SS +++IG + + E + F H G
Sbjct: 177 WATRKPPPPRQPETTKQLSYDDVCNSSSYTNTTVYIGGVTTGLTEGKMRETFSHYGHIQE 236
Query: 103 GKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQM 140
++ +K GY FI F++H +A + + NG+Q+
Sbjct: 237 VRIFPDK------GYAFIRFMTHESAAHAIVSVNGSQI 268
>gi|356519889|ref|XP_003528601.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 422
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 144/290 (49%), Gaps = 28/290 (9%)
Query: 47 WTPQPVPPPSQQTQPYG-VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKV 105
+ P + PP + P G + P RS+++G++ + E + +F TG K+
Sbjct: 29 YHPGLLAPPQIEPYPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSGTGPVEGCKL 88
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
IR +++ YGFI + +A + + NG + Q ++NWA Y +G+R G
Sbjct: 89 IRKDKSS----YGFIHYFDRRSAALAILSLNGRHL--FGQPIKVNWA-YASGQREDTSG- 140
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
+ IFVGDL+ +VTD L F +VY S A+V+ D+ TGRS+G+GFV F ++ + S
Sbjct: 141 HYNIFVGDLSPEVTDATLFACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSS 199
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQG-----------EN 270
+ ++ G +R +R ATK A ++ Q K+ + T GS EN
Sbjct: 200 INDLTGKWLGSRQIRCN-WATKGAGGNEEKQNSDAKSVVELTNGSSEDGKETSNSDAPEN 258
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQFA 318
+P TT++VG L P VT L F G V V++ K GFV+++
Sbjct: 259 NPQYTTVYVGNLAPEVTQLDLHRHFHALGAGVMEEVRVQRDKGFGFVRYS 308
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 40/204 (19%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
+ G ++++GDL P + ++ + + F +V+ +++T S G+GF+ F + A+
Sbjct: 138 TSGHYNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ 197
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYGAG-------------------------ERRQDDG 164
+ G + S + R NWAT GAG E D
Sbjct: 198 SSINDLTGKWLGSRQ--IRCNWATKGAGGNEEKQNSDAKSVVELTNGSSEDGKETSNSDA 255
Query: 165 PD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDE 219
P+ T++VG+LA +VT L F A+ GA V+ + R KG+GFVR+
Sbjct: 256 PENNPQYTTVYVGNLAPEVTQLDLHRHFHAL-----GAGVMEEVRVQRDKGFGFVRYSTH 310
Query: 220 SEQLRS--MTEMNGVLCSTRPMRI 241
+E + M +LC +P++
Sbjct: 311 AEAALAIQMGNAQSLLCG-KPIKC 333
>gi|389747119|gb|EIM88298.1| hypothetical protein STEHIDRAFT_95374 [Stereum hirsutum FP-91666
SS1]
Length = 932
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 112/220 (50%), Gaps = 41/220 (18%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTG-EFVSGKV-------IRNKQTNFSEGYGF 119
ASS +LW G+L+PWM+E Y + G + +S KV + +Q N + GY F
Sbjct: 177 ASSASRTTLWWGELEPWMDEEYAKQVCGLMNWDPLSIKVPHPAPDPVTGQQAN-NPGYCF 235
Query: 120 IEFVSHAAAERVLQTFNGTQ------MPSTEQNFRLNWATY-----------GAGERRQD 162
+ F + A VL N T MP++ + F LNWA+ G ++Q
Sbjct: 236 LTFSTQGQASSVLNQINTTNSGTPITMPNSTKPFLLNWASSTPIPPSLSPPGGVSAQQQQ 295
Query: 163 DGPDFTIFVGDLAADVTDYVLQETFRAV---------------YSSVKGAKVVTDRTTGR 207
+++IFVGDLA + ++ L FR + S K AK++ D TG
Sbjct: 296 YPKEYSIFVGDLAPEASNSDLVAVFRNPVLGLRNDREPKFIRPFLSCKSAKIMLDPVTGV 355
Query: 208 SKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
S+GYGFVRF DE++Q R++ EM+G+ C +RPMRI PA K
Sbjct: 356 SRGYGFVRFTDEADQQRALIEMHGLYCLSRPMRISPATAK 395
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Query: 246 TKKAATGQQYQKATYQNTQGSQGE----NDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
T+++ QQ +A N G GE DP NTT+FVGGL P ++++ L+T F +GE+
Sbjct: 532 TEESWKHQQQARAILGNLIGPNGEQLTSTDPYNTTVFVGGLSPLISEETLRTFFAPFGEI 591
Query: 302 VHVKIPAGKRCGFVQFANR 320
+VK+P GK CGFVQF +
Sbjct: 592 HYVKVPVGKHCGFVQFVRK 610
>gi|297742974|emb|CBI35841.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 146/289 (50%), Gaps = 28/289 (9%)
Query: 47 WTPQPVPPPSQQTQPYG-VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKV 105
+ P + PP + P G + P S RS+++G++ + E + +F TG K+
Sbjct: 12 YHPGLLAPPQIEPIPSGNLPPGFDSSTCRSVYVGNIHTQVSEPLLQEVFASTGPVEGCKL 71
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
+R ++++ YGFI + +A + + NG + Q ++NWA Y +G+R +D
Sbjct: 72 VRKEKSS----YGFIHYFDRRSAALAILSLNGRHL--FGQPIKVNWA-YASGQR-EDTSG 123
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
F IFVGDL+ +VTD L F +V+ S A+V+ D+ TGRS+G+GFV F ++ + +
Sbjct: 124 HFNIFVGDLSPEVTDATLFACF-SVFPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSA 182
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQG-----------EN 270
+ ++ G +R +R ATK A + Q K+ + T GS +N
Sbjct: 183 INDITGKWLGSRQIRCN-WATKGAGSNDDKQSSDAKSVVELTNGSSEDGKETATNEAPDN 241
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQF 317
+P TT++VG L P VT L F +G V V++ K GFV++
Sbjct: 242 NPQYTTVYVGNLAPEVTQLDLHRHFHTFGAGVIEEVRVQRDKGFGFVRY 290
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 40/204 (19%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
+ G ++++GDL P + ++ + + F +V+ +++T S G+GF+ F + A+
Sbjct: 121 TSGHFNIFVGDLSPEVTDATLFACFSVFPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ 180
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYGAG-------------------------ERRQDDG 164
+ G + S + R NWAT GAG E ++
Sbjct: 181 SAINDITGKWLGSRQ--IRCNWATKGAGSNDDKQSSDAKSVVELTNGSSEDGKETATNEA 238
Query: 165 PD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDE 219
PD T++VG+LA +VT L F GA V+ + R KG+GFVR+
Sbjct: 239 PDNNPQYTTVYVGNLAPEVTQLDLHRHFHTF-----GAGVIEEVRVQRDKGFGFVRYNTH 293
Query: 220 SEQLRS--MTEMNGVLCSTRPMRI 241
+E + M +LC +P++
Sbjct: 294 AEAALAIQMGNTQSILCG-KPIKC 316
>gi|195388164|ref|XP_002052753.1| GJ17734 [Drosophila virilis]
gi|194149210|gb|EDW64908.1| GJ17734 [Drosophila virilis]
Length = 345
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 106/182 (58%), Gaps = 13/182 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+ +M E++I + F GE + +++RNK T GY F+ F+S A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 135 FNGTQMPSTE--QNFRLNWATYGA---GERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
NG +P T FRLN A+ G R+ F+++VGDL++DV DY L + F +
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE-----FSVWVGDLSSDVDDYSLYKVFSS 122
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKK 248
Y+S+K AKV+ D + G SKGYGFVRFG E EQ ++ +MNG + T+P++I A K
Sbjct: 123 KYTSIKTAKVILD-SLGFSKGYGFVRFGIEDEQKSALYDMNGYVGLGTKPIKICNAVPKP 181
Query: 249 AA 250
A
Sbjct: 182 KA 183
>gi|241951870|ref|XP_002418657.1| RNA binding protein, putative [Candida dubliniensis CD36]
gi|223641996|emb|CAX43960.1| RNA binding protein, putative [Candida dubliniensis CD36]
Length = 451
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 140/261 (53%), Gaps = 21/261 (8%)
Query: 76 LWIGDLQP-WMEESYIASIFGHTGEFVSG----KVIRNKQTNFSEGYGFIEFVSHAAAER 130
+W+GDL P W EES I +++ + VS K++R++ Y F+ F + +
Sbjct: 84 MWMGDLDPHWTEES-IDNLWT---KLVSKPHHVKIMRDRLQPSKPSYCFVTFRDKESIDL 139
Query: 131 VLQTFNGTQMPSTEQNFRLNWA---TYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
+Q NG ++P + + F+LN++ + G+ +R + +++IF+GDLA +V+D L F
Sbjct: 140 AIQR-NGQKVPDSNRVFKLNYSGRNSTGSNDRSTNLSNEYSIFIGDLAPEVSDATLFNKF 198
Query: 188 RAVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
Y + +K AKV+ D +T +SKG+GFV+F R++ EM G ++ +R+G AA
Sbjct: 199 SMKYPNQIKQAKVIVDSSTRKSKGFGFVKFHSPETMNRALKEMQGYTIGSKAIRVGLAAG 258
Query: 247 KKAATGQQ-YQKATYQNTQGSQGE------NDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
T Q K + Q + DPNNT++ + GL +T+ L+ F +G
Sbjct: 259 SNVDTSSQPVTKLDHHRIPVPQPQPALNQFTDPNNTSLTISGLSGRITESELEQHFIGFG 318
Query: 300 ELVHVKIPAGKRCGFVQFANR 320
++++ ++ + G+V+F +R
Sbjct: 319 DIIYCRVSRDYQTGYVKFYSR 339
>gi|256082950|ref|XP_002577714.1| tRNA selenocysteine associated protein (secp43) [Schistosoma
mansoni]
gi|360043607|emb|CCD81153.1| putative trna selenocysteine associated protein (secp43)
[Schistosoma mansoni]
Length = 348
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 104/178 (58%), Gaps = 9/178 (5%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGE-FVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
++W+GDL+P+M+E +I F +GE VS KVIRNK T + GYGFIEF + +A +
Sbjct: 6 HTIWMGDLEPYMDEMFIKRAFETSGENIVSVKVIRNKATGQTLGYGFIEFANSTSARDAM 65
Query: 133 QTFNGTQMPST-EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + F+LN A+YG + + ++FVG+L DV D L F+ Y
Sbjct: 66 LKLNGKLIPGAPTRRFKLNHASYGKDSTSSN---ECSLFVGELTEDVDDLALFNAFKK-Y 121
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM-NGVLCSTRPMRIGPAATKK 248
+ + AKVV T G+S+GYGFVRF ES+ +++ EM N +P+R+ A K+
Sbjct: 122 PTCRSAKVVM--TNGKSRGYGFVRFLTESDMDKALIEMQNYCGLGYKPIRVSLAIPKR 177
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 24/156 (15%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
TI++GDL + + ++ F ++ KV+ ++ TG++ GYGF+ F + + +M
Sbjct: 7 TIWMGDLEPYMDEMFIKRAFETSGENIVSVKVIRNKATGQTLGYGFIEFANSTSARDAML 66
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEN--DPNNTTIFVGGLDPS 285
++NG L P R ++ S G++ N ++FVG L
Sbjct: 67 KLNGKLIPGAPTR------------------RFKLNHASYGKDSTSSNECSLFVGELTED 108
Query: 286 VTDDILKTVFGQYGELVHVKIPA----GKRCGFVQF 317
V D L F +Y K+ + GFV+F
Sbjct: 109 VDDLALFNAFKKYPTCRSAKVVMTNGKSRGYGFVRF 144
>gi|225442061|ref|XP_002270823.1| PREDICTED: nucleolysin TIAR [Vitis vinifera]
Length = 420
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 146/289 (50%), Gaps = 28/289 (9%)
Query: 47 WTPQPVPPPSQQTQPYG-VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKV 105
+ P + PP + P G + P S RS+++G++ + E + +F TG K+
Sbjct: 25 YHPGLLAPPQIEPIPSGNLPPGFDSSTCRSVYVGNIHTQVSEPLLQEVFASTGPVEGCKL 84
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
+R ++++ YGFI + +A + + NG + Q ++NWA Y +G+R +D
Sbjct: 85 VRKEKSS----YGFIHYFDRRSAALAILSLNGRHL--FGQPIKVNWA-YASGQR-EDTSG 136
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
F IFVGDL+ +VTD L F +V+ S A+V+ D+ TGRS+G+GFV F ++ + +
Sbjct: 137 HFNIFVGDLSPEVTDATLFACF-SVFPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSA 195
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQG-----------EN 270
+ ++ G +R +R ATK A + Q K+ + T GS +N
Sbjct: 196 INDITGKWLGSRQIRCN-WATKGAGSNDDKQSSDAKSVVELTNGSSEDGKETATNEAPDN 254
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQF 317
+P TT++VG L P VT L F +G V V++ K GFV++
Sbjct: 255 NPQYTTVYVGNLAPEVTQLDLHRHFHTFGAGVIEEVRVQRDKGFGFVRY 303
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 40/204 (19%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
+ G ++++GDL P + ++ + + F +V+ +++T S G+GF+ F + A+
Sbjct: 134 TSGHFNIFVGDLSPEVTDATLFACFSVFPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ 193
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYGAG-------------------------ERRQDDG 164
+ G + S + R NWAT GAG E ++
Sbjct: 194 SAINDITGKWLGSRQ--IRCNWATKGAGSNDDKQSSDAKSVVELTNGSSEDGKETATNEA 251
Query: 165 PD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDE 219
PD T++VG+LA +VT L F GA V+ + R KG+GFVR+
Sbjct: 252 PDNNPQYTTVYVGNLAPEVTQLDLHRHFHTF-----GAGVIEEVRVQRDKGFGFVRYNTH 306
Query: 220 SEQLRS--MTEMNGVLCSTRPMRI 241
+E + M +LC +P++
Sbjct: 307 AEAALAIQMGNTQSILCG-KPIKC 329
>gi|356547954|ref|XP_003542369.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 410
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 152/308 (49%), Gaps = 32/308 (10%)
Query: 31 QQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPY---GVAPDASSDGIRSLWIGDLQPWMEE 87
Q Q+ + + P + P + PP Q +P + P S RS+++G++ P + +
Sbjct: 2 QPQRLRQHAMLQPSLYHHPALLTPP--QIEPILSGNLPPGFDSSSCRSVYVGNIHPQVTD 59
Query: 88 SYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNF 147
S + +F G K+IR ++++ YGF+++ ++A + T NG + Q
Sbjct: 60 SLLQELFSTAGALEGCKLIRKEKSS----YGFVDYFDRSSAAFAIVTLNGRNI--FGQPI 113
Query: 148 RLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGR 207
++NWA A +R+D F IFVGDL+ +VTD L F +VY S A+V+ D+ TGR
Sbjct: 114 KVNWAY--ASSQREDTSGHFNIFVGDLSPEVTDATLYACF-SVYPSCSDARVMWDQKTGR 170
Query: 208 SKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQ------ 261
S+G+GFV F ++ + ++ ++ G +R +R ATK A+ + Q + +
Sbjct: 171 SRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN-WATKGASASDEKQSSDSKIVVELI 229
Query: 262 NTQGSQG---------ENDPNNTTIFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGK 310
N +G E +P TT++VG L P VT L F G + V++ K
Sbjct: 230 NGSSEEGQETTNDDTPEKNPQYTTVYVGNLAPEVTSVDLHQHFHSLNAGIIEDVRVQRDK 289
Query: 311 RCGFVQFA 318
GFV+++
Sbjct: 290 GFGFVRYS 297
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 93/217 (42%), Gaps = 37/217 (17%)
Query: 55 PSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFS 114
P + Y + + G ++++GDL P + ++ + + F +V+ +++T S
Sbjct: 112 PIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDATLYACFSVYPSCSDARVMWDQKTGRS 171
Query: 115 EGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAG----------------- 157
G+GF+ F + A+ + G + S + R NWAT GA
Sbjct: 172 RGFGFVSFRNQQDAQSAINDLTGKWLGS--RQIRCNWATKGASASDEKQSSDSKIVVELI 229
Query: 158 --------ERRQDDGPD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRT 204
E DD P+ T++VG+LA +VT L + F ++ A ++ D
Sbjct: 230 NGSSEEGQETTNDDTPEKNPQYTTVYVGNLAPEVTSVDLHQHFHSL-----NAGIIEDVR 284
Query: 205 TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
R KG+GFVR+ +E ++ N + +P++
Sbjct: 285 VQRDKGFGFVRYSTHAEAALAIQMGNARILFGKPIKC 321
>gi|156058654|ref|XP_001595250.1| hypothetical protein SS1G_03339 [Sclerotinia sclerotiorum 1980]
gi|154701126|gb|EDO00865.1| hypothetical protein SS1G_03339 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 501
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 127/263 (48%), Gaps = 23/263 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G L P + E + IF TG + K+I +K + YGF+E+ AAER +Q
Sbjct: 89 RALYVGGLDPRVTEEVLRQIFETTGHVQNVKIIPDKNSK-GFNYGFVEYDDPGAAERAMQ 147
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ E R+NWA ++D F IFVGDL+ +V D VL + F A + S
Sbjct: 148 TLNGRRVHQAE--IRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 204
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V A+V+ D TGRS+GYGF F + + ++++ M+G +R +R A K +
Sbjct: 205 VSEARVMWDMKTGRSRGYGFAAFRERQDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 264
Query: 254 QYQKATYQN-------------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDILKTV 294
Q Q + T G Q + P TT +VG L P T L +
Sbjct: 265 QQQAMSAMGMTPTTPFGHHHFPTHGVQSYDMIVQQTPQWQTTCYVGNLTPYTTQQDLVPL 324
Query: 295 FGQYGELVHVKIPAGKRCGFVQF 317
F +G +V + A + FV+
Sbjct: 325 FQNFGYVVETRFQADRGFAFVKM 347
>gi|393218535|gb|EJD04023.1| hypothetical protein FOMMEDRAFT_133373 [Fomitiporia mediterranea
MF3/22]
Length = 422
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 131/264 (49%), Gaps = 35/264 (13%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERVL 132
L++G+L P + E + IF G K+I ++ N+ G YGF+E++ AAE L
Sbjct: 15 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYMDMRAAETAL 72
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT NG ++ TE R+NWA Y ++D F +FVGDL+ +V D VL + F A +
Sbjct: 73 QTLNGRKIFDTE--IRVNWA-YQGSTAKEDTSGHFHVFVGDLSPEVNDAVLAKAFSA-FG 128
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
++ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +R +R+ A
Sbjct: 129 TLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWA-------N 181
Query: 253 QQYQKATYQNTQGSQGENDP-------------------NNTTIFVGGLDPSVTDDILKT 293
Q+ Q A G+ G P NTT++VG L P T L
Sbjct: 182 QKTQGAPAPRPTGAGGAPAPINFQGGPLSYETVVQQTPAYNTTVYVGNLVPYCTQADLIP 241
Query: 294 VFGQYGELVHVKIPAGKRCGFVQF 317
+F G L +++ A + FV+
Sbjct: 242 LFQSIGYLSEIRMQADRGFAFVKL 265
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 80/194 (41%), Gaps = 37/194 (19%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + ++ +A F G +V+ + + S GYGF+ F AE+ + T
Sbjct: 106 VFVGDLSPEVNDAVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATM 165
Query: 136 NGTQMPSTEQNFRLNWA---TYGAGERR-------------------------QDDGPDF 167
NG + S + R+NWA T GA R Q +
Sbjct: 166 NGEWLGS--RAIRVNWANQKTQGAPAPRPTGAGGAPAPINFQGGPLSYETVVQQTPAYNT 223
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T++VG+L T L F+++ + ++ DR G+ FV+ ++
Sbjct: 224 TVYVGNLVPYCTQADLIPLFQSI-GYLSEIRMQADR------GFAFVKLDTHENAAMAIV 276
Query: 228 EMNGVLCSTRPMRI 241
++ G + RP++
Sbjct: 277 QLQGQMVHGRPIKC 290
>gi|164424152|ref|XP_962723.2| hypothetical protein NCU07874 [Neurospora crassa OR74A]
gi|157070397|gb|EAA33487.2| hypothetical protein NCU07874 [Neurospora crassa OR74A]
Length = 480
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 136/284 (47%), Gaps = 28/284 (9%)
Query: 55 PSQQTQPYG--VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTN 112
P+ P+G AP+ + R+L++G L P + E + IF TG + K+I +K
Sbjct: 73 PTSAGNPFGRRAAPEPNK---RALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNQK 129
Query: 113 FSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVG 172
YGF+E+ AAER +QT NG ++ +E R+NWA + ++D F IFVG
Sbjct: 130 -GYNYGFVEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSNNQNKEDTSGHFHIFVG 186
Query: 173 DLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGV 232
DL+ +V D VL + F A + SV A+V+ D TGRS+GYGFV F D + ++++ M+G
Sbjct: 187 DLSNEVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGE 245
Query: 233 LCSTRPMRIGPAATKKAATGQQYQKATYQN-------------TQGSQ------GENDPN 273
+R +R A K + Q Q T G +
Sbjct: 246 WLGSRAIRCNWANQKGQPSIAQQQAMQQMGLTPTTPYGHHHFPTHGVHSYDMIVAQTPAW 305
Query: 274 NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
TT +VG L P T + L +F +G +V + A + F++
Sbjct: 306 QTTCYVGNLTPYTTQNDLVPLFQNFGYVVESRFQADRGFAFIKM 349
>gi|255641747|gb|ACU21144.1| unknown [Glycine max]
Length = 397
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 152/308 (49%), Gaps = 32/308 (10%)
Query: 31 QQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPY---GVAPDASSDGIRSLWIGDLQPWMEE 87
Q Q+ + + P + P + PP Q +P + P S RS+++G++ P + +
Sbjct: 2 QPQRLRQHAMLQPSLYHHPALLTPP--QIEPILSGNLPPGFDSSSCRSVYVGNIHPQVTD 59
Query: 88 SYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNF 147
S + +F G K+IR ++++ YGF+++ ++A + T NG + Q
Sbjct: 60 SLLQELFSTAGALEGCKLIRKEKSS----YGFVDYFDRSSAAFAIVTLNGRNI--FGQPI 113
Query: 148 RLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGR 207
++NWA A +R+D F IFVGDL+ +VTD L F +VY S A+V+ D+ TGR
Sbjct: 114 KVNWAY--ASSQREDTSGHFNIFVGDLSPEVTDATLYACF-SVYPSCSDARVMWDQKTGR 170
Query: 208 SKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQ------ 261
S+G+GFV F ++ + ++ ++ G +R +R ATK A+ + Q + +
Sbjct: 171 SRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN-WATKGASASDEKQSSDSKIVVELI 229
Query: 262 NTQGSQG---------ENDPNNTTIFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGK 310
N +G E +P TT++VG L P VT L F G + V++ K
Sbjct: 230 NGSSEEGQETTNDDTPEKNPQYTTVYVGNLAPEVTSVDLHQHFHSLNAGIIEDVRVQRDK 289
Query: 311 RCGFVQFA 318
GFV+++
Sbjct: 290 GFGFVRYS 297
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 93/217 (42%), Gaps = 37/217 (17%)
Query: 55 PSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFS 114
P + Y + + G ++++GDL P + ++ + + F +V+ +++T S
Sbjct: 112 PIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDATLYACFSVYPSCSDARVMWDQKTGRS 171
Query: 115 EGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAG----------------- 157
G+GF+ F + A+ + G + S + R NWAT GA
Sbjct: 172 RGFGFVSFRNQQDAQSAINDLTGKWLGS--RQIRCNWATKGASASDEKQSSDSKIVVELI 229
Query: 158 --------ERRQDDGPD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRT 204
E DD P+ T++VG+LA +VT L + F ++ A ++ D
Sbjct: 230 NGSSEEGQETTNDDTPEKNPQYTTVYVGNLAPEVTSVDLHQHFHSL-----NAGIIEDVR 284
Query: 205 TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
R KG+GFVR+ +E ++ N + +P++
Sbjct: 285 VQRDKGFGFVRYSTHAEAALAIQMGNARILFGKPIKC 321
>gi|357479379|ref|XP_003609975.1| RNA-binding protein [Medicago truncatula]
gi|355511030|gb|AES92172.1| RNA-binding protein [Medicago truncatula]
Length = 404
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 138/272 (50%), Gaps = 27/272 (9%)
Query: 64 VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFV 123
+ P S RS+++G++ P + E + +F G K+IR ++++ YGF+++
Sbjct: 36 LPPGFDSSTCRSVYVGNIHPQVSEPLLQELFSSAGALEGCKLIRKEKSS----YGFVDYF 91
Query: 124 SHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
++A + T NG + Q+ ++NWA Y G+R G F IFVGDL+ +VTD L
Sbjct: 92 DRSSAAIAIVTLNGRNI--FGQSIKVNWA-YTRGQREDTSG-HFHIFVGDLSPEVTDATL 147
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
F A YSS A+V+ D+ TGRS+G+GFV F ++ E ++ ++ G +R +R
Sbjct: 148 YACFSA-YSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLTGKWLGSRQIRCN- 205
Query: 244 AATKKAATGQQYQ----KATYQNTQGSQG-----------ENDPNNTTIFVGGLDPSVTD 288
ATK A + Q K+ + T G+ E +P TT++VG L P VT
Sbjct: 206 WATKGANMNGENQSSESKSVVELTSGTSEEAQEMTSDDSPEKNPQYTTVYVGNLAPEVTS 265
Query: 289 DILKTVFGQY--GELVHVKIPAGKRCGFVQFA 318
L F G + V++ K GFV+++
Sbjct: 266 VDLHHHFHALGVGTIEDVRVQRDKGFGFVRYS 297
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 82/196 (41%), Gaps = 37/196 (18%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + ++ + + F +V+ +++T S G+GF+ F + A+ +
Sbjct: 133 IFVGDLSPEVTDATLYACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDL 192
Query: 136 NGTQMPSTEQNFRLNWATYGAG-------------------------ERRQDDGPD---- 166
G + S + R NWAT GA E DD P+
Sbjct: 193 TGKWLGS--RQIRCNWATKGANMNGENQSSESKSVVELTSGTSEEAQEMTSDDSPEKNPQ 250
Query: 167 -FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
T++VG+LA +VT L F A+ G + D R KG+GFVR+ E +
Sbjct: 251 YTTVYVGNLAPEVTSVDLHHHFHAL-----GVGTIEDVRVQRDKGFGFVRYSTHGEAALA 305
Query: 226 MTEMNGVLCSTRPMRI 241
+ N +P++
Sbjct: 306 IQMGNTRFLFGKPIKC 321
>gi|156358574|ref|XP_001624592.1| predicted protein [Nematostella vectensis]
gi|156211382|gb|EDO32492.1| predicted protein [Nematostella vectensis]
Length = 235
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 121/240 (50%), Gaps = 5/240 (2%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFN 136
++G+L P + I SIF + V K+I + ++ Y F+EF +HA A+ F
Sbjct: 1 YVGNLDPKCTQELICSIFNKIAKVVRCKMINS--VSYKGPYCFVEFETHADAQEA--KFR 56
Query: 137 GTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKG 196
Q ++ ++NWAT G +R D F IFVGDLA +V + +L++TF + +
Sbjct: 57 MDQRTVMDKKLKVNWATNHPGMKRGDTNNHFHIFVGDLAENVDNALLRKTFEP-FGEISE 115
Query: 197 AKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ 256
+VV D +SKG+GFV F + +++ EM+ V + ++ AA K T +Y
Sbjct: 116 VRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAARKNNPTQSKYV 175
Query: 257 KATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQ 316
++ NTT++VG L P V D L+ +F QYG ++ K+ A K F++
Sbjct: 176 CVKNLLWDDVFHQSSQLNTTVYVGNLPPDVKDYELQQMFSQYGSILETKVFADKGYAFIK 235
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 25/156 (16%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL ++ + + F GE +V+++ N S+G+GF+ FV A + +
Sbjct: 89 IFVGDLAENVDNALLRKTFEPFGEISEVRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEM 148
Query: 136 NGTQMPSTEQNFRLNWAT---------YGAGER-------RQDDGPDFTIFVGDLAADVT 179
+ + + + NWA Y + Q + T++VG+L DV
Sbjct: 149 DSVTIGGKQ--VKTNWAARKNNPTQSKYVCVKNLLWDDVFHQSSQLNTTVYVGNLPPDVK 206
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVR 215
DY LQ+ F + Y S+ KV D KGY F++
Sbjct: 207 DYELQQMF-SQYGSILETKVFAD------KGYAFIK 235
>gi|224119532|ref|XP_002331184.1| predicted protein [Populus trichocarpa]
gi|222873305|gb|EEF10436.1| predicted protein [Populus trichocarpa]
Length = 426
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 143/288 (49%), Gaps = 32/288 (11%)
Query: 48 TPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIR 107
PQ P PS P G P RS+++G++ + E + +F TG K+IR
Sbjct: 37 APQIEPIPSGNLPP-GFDPST----CRSVYVGNIHTQVTEPLLQEVFASTGPVEGCKLIR 91
Query: 108 NKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDF 167
++++ YGFI + AA + + NG + Q ++NWA Y +G+R +D F
Sbjct: 92 KEKSS----YGFIHYFDRRAAALAILSLNGRHL--FGQPIKVNWA-YASGQR-EDTSGHF 143
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
IFVGDL+ +VTD L F +VY S A+V+ D+ TGRS+G+GFV F ++ + ++
Sbjct: 144 NIFVGDLSPEVTDATLYACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIN 202
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQG-----------ENDP 272
++ G +R +R AA K A++ Q K+ + T G+ EN+P
Sbjct: 203 DLTGKWLGSRQIRCNWAA-KGASSNDDKQSSDSKSVVELTNGTSEDCKEATNNEAPENNP 261
Query: 273 NNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQFA 318
TT++VG L P V L F G V V++ K GFV+F+
Sbjct: 262 QYTTVYVGNLAPEVAQPDLHRHFHALGAGVIEEVRVQRDKGFGFVRFS 309
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 79/182 (43%), Gaps = 37/182 (20%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
+ G ++++GDL P + ++ + + F +V+ +++T S G+GF+ F + A+
Sbjct: 139 TSGHFNIFVGDLSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ 198
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYGAG-------------------------ERRQDDG 164
+ G + S + R NWA GA E ++
Sbjct: 199 SAINDLTGKWLGSRQ--IRCNWAAKGASSNDDKQSSDSKSVVELTNGTSEDCKEATNNEA 256
Query: 165 PD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDE 219
P+ T++VG+LA +V L F A+ GA V+ + R KG+GFVRF
Sbjct: 257 PENNPQYTTVYVGNLAPEVAQPDLHRHFHAL-----GAGVIEEVRVQRDKGFGFVRFSTH 311
Query: 220 SE 221
+E
Sbjct: 312 AE 313
>gi|357479381|ref|XP_003609976.1| RNA-binding protein [Medicago truncatula]
gi|355511031|gb|AES92173.1| RNA-binding protein [Medicago truncatula]
Length = 415
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 138/272 (50%), Gaps = 27/272 (9%)
Query: 64 VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFV 123
+ P S RS+++G++ P + E + +F G K+IR ++++ YGF+++
Sbjct: 36 LPPGFDSSTCRSVYVGNIHPQVSEPLLQELFSSAGALEGCKLIRKEKSS----YGFVDYF 91
Query: 124 SHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
++A + T NG + Q+ ++NWA Y G+R G F IFVGDL+ +VTD L
Sbjct: 92 DRSSAAIAIVTLNGRNI--FGQSIKVNWA-YTRGQREDTSG-HFHIFVGDLSPEVTDATL 147
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
F A YSS A+V+ D+ TGRS+G+GFV F ++ E ++ ++ G +R +R
Sbjct: 148 YACFSA-YSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLTGKWLGSRQIRCN- 205
Query: 244 AATKKAATGQQYQ----KATYQNTQGSQG-----------ENDPNNTTIFVGGLDPSVTD 288
ATK A + Q K+ + T G+ E +P TT++VG L P VT
Sbjct: 206 WATKGANMNGENQSSESKSVVELTSGTSEEAQEMTSDDSPEKNPQYTTVYVGNLAPEVTS 265
Query: 289 DILKTVFGQY--GELVHVKIPAGKRCGFVQFA 318
L F G + V++ K GFV+++
Sbjct: 266 VDLHHHFHALGVGTIEDVRVQRDKGFGFVRYS 297
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 39/208 (18%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + ++ + + F +V+ +++T S G+GF+ F + A+ +
Sbjct: 133 IFVGDLSPEVTDATLYACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDL 192
Query: 136 NGTQMPSTEQNFRLNWATYGAG-------------------------ERRQDDGPD---- 166
G + S + R NWAT GA E DD P+
Sbjct: 193 TGKWLGS--RQIRCNWATKGANMNGENQSSESKSVVELTSGTSEEAQEMTSDDSPEKNPQ 250
Query: 167 -FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
T++VG+LA +VT L F A+ G + D R KG+GFVR+ E +
Sbjct: 251 YTTVYVGNLAPEVTSVDLHHHFHAL-----GVGTIEDVRVQRDKGFGFVRYSTHGEAALA 305
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ N +P+++ T+K A +
Sbjct: 306 IQMGNTRFLFGKPIKM--HITRKKAVSK 331
>gi|299748443|ref|XP_001839126.2| RNA-binding protein Csx1 [Coprinopsis cinerea okayama7#130]
gi|298407975|gb|EAU82695.2| RNA-binding protein Csx1 [Coprinopsis cinerea okayama7#130]
Length = 808
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/242 (35%), Positives = 119/242 (49%), Gaps = 48/242 (19%)
Query: 54 PPSQ--QTQPYGVAPDASSDGIRS-LWIGDLQPWMEESYIASIFGHTG-EFVSGKV---- 105
PPS T P + P +SS+ RS LW GDL+ WM+E Y + G + V+ KV
Sbjct: 68 PPSSTTATNPAPLLPVSSSNTSRSTLWWGDLEVWMDEEYARQVCTLMGWDPVNIKVPHPA 127
Query: 106 ---IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNG----TQMPSTEQNFRLNWATY---- 154
+Q + GY F+ F SHA A VL N MP++ + F LNWA+
Sbjct: 128 PDPATGQQPANNPGYCFLTFPSHAHAAAVLAQINNAGKSVTMPNSSRPFVLNWASSVPAS 187
Query: 155 --GA-----GERRQDDGP-------DFTIFVGDLAADVTDYVLQETFRAV---------- 190
GA G P +++IFVGDLA + ++ L FR
Sbjct: 188 ATGASASFSGGAYPSSAPQQPQYQKEYSIFVGDLAPETSNSDLVAVFRNPVLGLRNDREP 247
Query: 191 -----YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
+ S K AK++ D TG S+GYGFVRF DE++Q R++ EM+G+ C +RPMRI PA
Sbjct: 248 KYIRPFLSCKSAKIMLDPVTGVSRGYGFVRFTDEADQQRALIEMHGLYCLSRPMRISPAT 307
Query: 246 TK 247
K
Sbjct: 308 AK 309
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 253 QQYQKATYQNTQGSQGE----NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA 308
Q +A N G GE DP NTT+FVGGL P ++++ L+T F +G++ +VK+P
Sbjct: 470 QAQARAILGNLIGPNGEQLTSTDPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPV 529
Query: 309 GKRCGFVQFANR 320
GK CGFVQF +
Sbjct: 530 GKHCGFVQFVRK 541
>gi|367051094|ref|XP_003655926.1| hypothetical protein THITE_2120229 [Thielavia terrestris NRRL 8126]
gi|347003190|gb|AEO69590.1| hypothetical protein THITE_2120229 [Thielavia terrestris NRRL 8126]
Length = 500
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 144/314 (45%), Gaps = 41/314 (13%)
Query: 41 VPPPVGWTPQPVPP-PSQQTQPYGVAPDAS-----SDG------------IRSLWIGDLQ 82
+PPP PQ P P+ T P G D S S G R+L++G L
Sbjct: 39 MPPPPLHIPQNTNPIPTAITSPMGAGGDKSGIMSPSSGGPFGRRAAPEPNKRALYVGGLD 98
Query: 83 PWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPS 142
P + E + IF TG S K+I +K YGF+E+ AAER +QT NG ++
Sbjct: 99 PRVTEDVLRQIFETTGHVQSVKIIPDKNAR-GYNYGFVEYDDPGAAERAMQTLNGRRVHQ 157
Query: 143 TEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTD 202
+E R+NWA ++D F IFVGDL+ +V D VL + F A + SV A+V+ D
Sbjct: 158 SE--IRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGSVSEARVMWD 214
Query: 203 RTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN 262
TGRS+GYGFV F + ++ ++++ M+G +R +R A K + Q Q
Sbjct: 215 MKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQQMG 274
Query: 263 -------------TQGSQGENDPNN------TTIFVGGLDPSVTDDILKTVFGQYGELVH 303
T G + N TT +VG L P T + + +F +G +V
Sbjct: 275 LTPTTPYGHHHFPTHGIHSYDMIVNQTPAWQTTCYVGNLTPYTTQNDIVPLFQNFGFVVE 334
Query: 304 VKIPAGKRCGFVQF 317
+ A + FV+
Sbjct: 335 SRFQADRGFAFVKM 348
>gi|347967649|ref|XP_312633.5| AGAP002335-PA [Anopheles gambiae str. PEST]
gi|333468363|gb|EAA07505.5| AGAP002335-PA [Anopheles gambiae str. PEST]
Length = 458
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 124/251 (49%), Gaps = 10/251 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++F G S K+IR + + FIE+ +H +A+ L
Sbjct: 8 KTLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIRETSI---DPFAFIEYANHQSAQTALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N E R+NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRMFLKKE--IRVNWATSAGNQPKTDTSQHHHIFVGDLSPEIDTETLREAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ ++V D T +S+GY FV F ++E ++ MNG +R +R + K A +
Sbjct: 122 ISNCRIVRDPQTLKSRGYAFVSFVKKAEAENAIAMMNGQWLGSRSIRTNWSTRKPPAPRE 181
Query: 254 QYQKATYQNTQGSQ---GENDPNNTTIFVGGLDP-SVTDDILKTVFGQYGELVHVKIPAG 309
+ T G + P NTT++ GG P ++TD++++ F Q+G + ++
Sbjct: 182 NSKGIKSGKTPGFEEIYNNTSPTNTTVYCGGFPPNAITDELIQKHFAQFGHINDTRVFKD 241
Query: 310 KRCGFVQFANR 320
K F++FA++
Sbjct: 242 KGYAFIRFASK 252
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 29/184 (15%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P ++ + F GE + +++R+ QT S GY F+ F
Sbjct: 85 GNQPKTDTSQHHHIFVGDLSPEIDTETLREAFAPFGEISNCRIVRDPQTLKSRGYAFVSF 144
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDG-------PDF-------- 167
V A AE + NG + S ++ R NW+T R++ P F
Sbjct: 145 VKKAEAENAIAMMNGQWLGS--RSIRTNWSTRKPPAPRENSKGIKSGKTPGFEEIYNNTS 202
Query: 168 ----TIFVGDLAAD-VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
T++ G + +TD ++Q+ F A + + +V D KGY F+RF +
Sbjct: 203 PTNTTVYCGGFPPNAITDELIQKHF-AQFGHINDTRVFKD------KGYAFIRFASKESA 255
Query: 223 LRSM 226
R++
Sbjct: 256 ARAI 259
>gi|170029244|ref|XP_001842503.1| RNA-binding post-transcriptional regulator csx1 [Culex
quinquefasciatus]
gi|167881606|gb|EDS44989.1| RNA-binding post-transcriptional regulator csx1 [Culex
quinquefasciatus]
Length = 326
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 103/176 (58%), Gaps = 6/176 (3%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+ +M E++I + F GE S K++RNK T GY F+ F + AA +
Sbjct: 8 LWMGSLESYMTEAFILAAFRKMGEDPSTVKLMRNKYTGDPAGYCFVSFKTDDAALDAMHK 67
Query: 135 FNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG +P T FRLN AT D +F+++VGDL++DV DY L F Y+
Sbjct: 68 LNGKPIPGTNPLVRFRLNSATNNQHRALLAD-REFSVWVGDLSSDVDDYSLYRVFSTKYT 126
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
S+K AKV+ D ++G SKGYGFV+FG E EQ ++ +MNG + ++P++I A K
Sbjct: 127 SIKTAKVILD-SSGFSKGYGFVKFGLEDEQKNALYDMNGFIGLGSKPLKICNAVPK 181
>gi|395329881|gb|EJF62266.1| hypothetical protein DICSQDRAFT_135856 [Dichomitus squalens
LYAD-421 SS1]
Length = 973
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 122/246 (49%), Gaps = 49/246 (19%)
Query: 52 VPPPSQQTQPYGVAPDASSDGIRS-LWIGDLQPWMEESYIASIFGHTG-EFVSGKV---- 105
+PP Q+ P +P ++ R+ LW G+L+PWM+E Y + G + +S KV
Sbjct: 210 LPPAQPQSLP---SPSTATSSPRTTLWWGELEPWMDEEYAKQVCNLMGWDPISIKVPRPA 266
Query: 106 ---IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQ----MPSTEQNFRLNWATYGAGE 158
I +Q N + GY F+ F + A A VL N + MP++ + F LNWA+
Sbjct: 267 PDPITGQQAN-NPGYCFLTFSTQAQAASVLSQVNNSSSPMIMPNSSKPFSLNWASSIPSA 325
Query: 159 RRQDDGP----------------DFTIFVGDLAADVTDYVLQETFRAV------------ 190
P +++IFVGDLA +V++ L FR
Sbjct: 326 PLSTSIPGQTISIPGVQNPQYPKEYSIFVGDLAPEVSNSDLVAVFRNPVLGLRNDREPRF 385
Query: 191 ---YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
+ S K AK++ D TG S+GYGFVRF DE++Q R++ EM+G+ C +RPMRI PA K
Sbjct: 386 IRPFLSCKSAKIMLDPVTGVSRGYGFVRFTDEADQQRALIEMHGLYCLSRPMRISPATAK 445
Query: 248 -KAATG 252
K A G
Sbjct: 446 FKPAPG 451
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 4/68 (5%)
Query: 257 KATYQNTQGSQGE----NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+A N G GE +DP NTT+FVGGL P +++D L+T F +GE+ +VK+P GK C
Sbjct: 606 RAILSNLIGPNGEQLTSSDPYNTTVFVGGLSPLISEDTLRTFFAPFGEIHYVKVPVGKHC 665
Query: 313 GFVQFANR 320
GFVQF +
Sbjct: 666 GFVQFVRK 673
>gi|449662778|ref|XP_004205609.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Hydra
magnipapillata]
Length = 336
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 99/176 (56%), Gaps = 5/176 (2%)
Query: 76 LWIGDLQPWMEESYIASIFGHTG-EFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G + M+E +I F + G + ++ K I NK T+ Y F++F A VL
Sbjct: 8 LWMGSISADMDEKFIKEAFANMGFKVLAVKEIFNKTTSERATYCFVDFGDIKTAREVLIK 67
Query: 135 FNGTQMPSTE-QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG +P E + F+LN + YG G DG ++++FVGD+ +DV D L + FR Y S
Sbjct: 68 LNGESIPGIEGKKFKLNRSEYGRGSS-HSDGIEYSLFVGDITSDVNDNHLLDFFRIKYPS 126
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKK 248
V+ AKVV D G KGYGFVRF +E E R++TEM GV RP+R+ A K
Sbjct: 127 VRAAKVVIDE-KGSHKGYGFVRFFNEEEINRALTEMQGVKGLGQRPIRVNKAVKSK 181
>gi|357148481|ref|XP_003574781.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 452
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 136/283 (48%), Gaps = 32/283 (11%)
Query: 54 PPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF 113
P S P G P RS+++G++ P + ES + +F +G K+IR ++++F
Sbjct: 61 PVSNGNLPPGFDPST----CRSVYVGNVHPNVTESLLIEVFQSSGPVERCKLIRKEKSSF 116
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGD 173
GF+++ +A + + +G + Q ++NWA A +R+D F IFVGD
Sbjct: 117 ----GFVDYYDRRSAALAIMSLHGRHIYG--QAIKVNWAY--ASTQREDTSGHFHIFVGD 168
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
L+++V D L F +VY+S A+V+ D TGRS+GYGFV F ++ E ++TEM G
Sbjct: 169 LSSEVNDATLYACF-SVYTSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKW 227
Query: 234 CSTRPMRIGPAATKKAATGQQ---YQKATYQNTQGSQG--------------ENDPNNTT 276
+R +R A A Q+ + N S EN+P+ TT
Sbjct: 228 LGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGSSSNAAMEGNQETGSKENPENNPDFTT 287
Query: 277 IFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQF 317
++VG L V D L F G + V++ K GFV++
Sbjct: 288 VYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQDKGFGFVRY 330
>gi|195437766|ref|XP_002066811.1| GK24678 [Drosophila willistoni]
gi|194162896|gb|EDW77797.1| GK24678 [Drosophila willistoni]
Length = 357
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 106/182 (58%), Gaps = 13/182 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+ +M E++I + F GE + +++RNK T GY F+ F+S A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 135 FNGTQMPSTE--QNFRLNWATYGA---GERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
NG +P T FRLN A+ G R+ F+++VGDL++DV DY L + F +
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE-----FSVWVGDLSSDVDDYQLYKVFSS 122
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKK 248
++S+K AKV+ D + G SKGYGFVRFG E EQ ++ +MNG + TRP++I A K
Sbjct: 123 KFTSIKTAKVILD-SLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTRPIKICNAVPKP 181
Query: 249 AA 250
A
Sbjct: 182 KA 183
>gi|18394471|ref|NP_564018.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
gi|9665134|gb|AAF97318.1|AC007843_21 Putative RNA binding protein [Arabidopsis thaliana]
gi|21553830|gb|AAM62923.1| oligouridylate binding protein, putative [Arabidopsis thaliana]
gi|111074422|gb|ABH04584.1| At1g17370 [Arabidopsis thaliana]
gi|332191458|gb|AEE29579.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
Length = 419
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 147/290 (50%), Gaps = 28/290 (9%)
Query: 47 WTPQPVPPPSQQTQPYG-VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKV 105
+ P + PP + P G + P RS+++G++ + E + +F TG S K+
Sbjct: 26 YHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHIQVTEPLLQEVFAGTGPVESCKL 85
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
IR ++++ YGF+ + +A + + NG + Q ++NWA Y +G+R +D
Sbjct: 86 IRKEKSS----YGFVHYFDRRSAGLAILSLNGRHLFG--QPIKVNWA-YASGQR-EDTSS 137
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
F IFVGDL+ +VTD +L F +VY + A+V+ D+ TGRS+G+GFV F ++ + +
Sbjct: 138 HFNIFVGDLSPEVTDAMLFTCF-SVYPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTA 196
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN---------------TQGSQGEN 270
+ E+ G +R +R ATK A +G+ Q + ++ T G EN
Sbjct: 197 IDEITGKWLGSRQIRCN-WATKGATSGEDKQSSDSKSVVELTSGVSEDGKDTTNGEAPEN 255
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQFA 318
+ TT++VG L P V+ L F G V V++ K GFV+++
Sbjct: 256 NAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYS 305
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 37/177 (20%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++GDL P + ++ + + F +V+ +++T S G+GF+ F + A+ +
Sbjct: 140 NIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDE 199
Query: 135 FNGTQMPSTEQNFRLNWATYGA--GERRQ---------------DDGPDFT--------- 168
G + S + R NWAT GA GE +Q +DG D T
Sbjct: 200 ITGKWLGS--RQIRCNWATKGATSGEDKQSSDSKSVVELTSGVSEDGKDTTNGEAPENNA 257
Query: 169 ----IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
++VG+LA +V+ L F ++ GA V+ + R KG+GFVR+ E
Sbjct: 258 QYTTVYVGNLAPEVSQVDLHRHFHSL-----GAGVIEEVRVQRDKGFGFVRYSTHVE 309
>gi|414875536|tpg|DAA52667.1| TPA: hypothetical protein ZEAMMB73_787505 [Zea mays]
Length = 448
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 79/117 (67%), Gaps = 4/117 (3%)
Query: 137 GTQMPSTEQ----NFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
TQ P+ ++ +F+L+ AT D D +IF+G+LA DVT Y+L F+A Y
Sbjct: 327 ATQQPAPKKLPHPDFKLDLATQQERHAADDSSSDHSIFIGNLAYDVTGYMLHHLFKAHYP 386
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA 249
SVK AK++ D++TG SK YGFV+FGD EQ++++T+MNG CSTRPMRIGP KK+
Sbjct: 387 SVKSAKIIFDKSTGLSKCYGFVQFGDVDEQIQALTKMNGAYCSTRPMRIGPVPKKKS 443
>gi|212538449|ref|XP_002149380.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces marneffei ATCC 18224]
gi|210069122|gb|EEA23213.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces marneffei ATCC 18224]
Length = 424
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 131/266 (49%), Gaps = 27/266 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF-SEG--YGFIEFVSHAAAER 130
R+L+IG L + E + IF TG S K+I +K NF S+G YGF+E+ AAER
Sbjct: 91 RALYIGGLDARVTEDILKQIFETTGHVQSVKIIPDK--NFQSKGMNYGFVEYDDPGAAER 148
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A
Sbjct: 149 AMQTLNGRRIHQSE--IRVNWAYQSNNTHKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA- 205
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK--- 247
+ SV A+V+ D TGRS+GYGFV F + + +++ M+ +R +R A K
Sbjct: 206 FGSVSEARVMWDMKTGRSRGYGFVAFREFEDAEKALKSMDREWLGSRAIRCNWANQKGQP 265
Query: 248 -------KAATGQQYQKATYQNTQGSQGENDPN---------NTTIFVGGLDPSVTDDIL 291
AA G + + G N + TT +VG L P T + L
Sbjct: 266 SISQQQAMAAMGMTPTAPFGHHHFPTHGANSYDMVVAQTPQWQTTCYVGNLTPYTTQNDL 325
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQF 317
+F +G +V ++ A + F++
Sbjct: 326 VPLFQNFGYVVETRLQADRGFAFLKM 351
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 7/54 (12%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI-------PAGKRCGFVQF 317
+PN +++GGLD VT+DILK +F G + VKI G GFV++
Sbjct: 87 EPNKRALYIGGLDARVTEDILKQIFETTGHVQSVKIIPDKNFQSKGMNYGFVEY 140
>gi|413916539|gb|AFW56471.1| hypothetical protein ZEAMMB73_945385 [Zea mays]
Length = 381
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 79/117 (67%), Gaps = 4/117 (3%)
Query: 137 GTQMPSTEQ----NFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
TQ P+ ++ +F+L+ AT D D +IF+G+LA DVT Y+L F+A Y
Sbjct: 260 ATQQPAPKKLPHPDFKLDLATQQERHAADDSSSDHSIFIGNLAYDVTGYMLHHLFKAHYP 319
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA 249
SVK AK++ D++TG SK YGFV+FGD EQ++++T+MNG CSTRPMRIGP KK+
Sbjct: 320 SVKSAKIIFDKSTGLSKCYGFVQFGDVDEQIQALTKMNGAYCSTRPMRIGPVPKKKS 376
>gi|242021493|ref|XP_002431179.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
gi|212516428|gb|EEB18441.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
Length = 403
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 126/254 (49%), Gaps = 17/254 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++F G K+IR ++ Y F+EFV+H AA L
Sbjct: 10 KTLYVGNLDVSVTEDLLCTLFSQIGSVKGCKIIREPN---NDPYAFVEFVNHQAASTALI 66
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N + E+ ++NWAT + +QD IFVGDL+ ++ + L+E F A +
Sbjct: 67 AMNKRHV--LEKEIKVNWATSPGNQPKQDTSSHHHIFVGDLSPEIEMHTLREAF-APFGE 123
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG-------PAAT 246
+ ++V D T +SKGY FV F ++E ++ MNG R +R P T
Sbjct: 124 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAESAIHAMNGQWLGNRSIRTNWSTRKPPPPRT 183
Query: 247 KKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
+++ G + +Y+ ++ P N T++ GG + +D+++ F ++G + ++
Sbjct: 184 ERSRQGNA-KAVSYEEV---YNQSSPTNCTVYCGGFTNGINEDLIEKAFSRFGTIQDIRS 239
Query: 307 PAGKRCGFVQFANR 320
K F++F+ +
Sbjct: 240 FKDKGYAFIRFSTK 253
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 76/187 (40%), Gaps = 28/187 (14%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + F GE + +++R+ QT S+GY F+ F
Sbjct: 87 GNQPKQDTSSHHHIFVGDLSPEIEMHTLREAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 146
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR-------------------QDD 163
V A AE + NG + ++ R NW+T R Q
Sbjct: 147 VKKAEAESAIHAMNGQWL--GNRSIRTNWSTRKPPPPRTERSRQGNAKAVSYEEVYNQSS 204
Query: 164 GPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQL 223
+ T++ G + + ++++ F + D + + KGY F+RF +
Sbjct: 205 PTNCTVYCGGFTNGINEDLIEKAFSRF-------GTIQDIRSFKDKGYAFIRFSTKEAAT 257
Query: 224 RSMTEMN 230
++ M+
Sbjct: 258 HAIEAMH 264
>gi|45184976|ref|NP_982694.1| AAR151Wp [Ashbya gossypii ATCC 10895]
gi|44980597|gb|AAS50518.1| AAR151Wp [Ashbya gossypii ATCC 10895]
Length = 481
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 151/371 (40%), Gaps = 112/371 (30%)
Query: 54 PPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF 113
PPS Q SS+ R+LW+GDL P +E+ I ++ G V K+IR K+
Sbjct: 9 PPSTTVQ-------TSSEPPRTLWMGDLDPSFDEATIQHVWLTVGHQVQVKLIRAKKNLL 61
Query: 114 -----------------------------------SEGYGFIEFVSHAAAERVLQTFNGT 138
GY F++F + A+ LQ N T
Sbjct: 62 IPCSTSSTLSASHVDEERIQINGVSFIDPNTTQLHHAGYCFVQFANLQEAQAGLQ-LNAT 120
Query: 139 QMPST-------------EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
+P+ ++NFRLNWA+ + P+F++FVGDL+ T+ L
Sbjct: 121 PLPNVVSPTTRNPTNPTGKRNFRLNWASGATLQSDIPATPEFSLFVGDLSPTATEAHLLS 180
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE----------------QLRSM--T 227
F+ + SVK +V+TD TG S+ +GFVRF DE E QLR T
Sbjct: 181 LFQTKFKSVKTVRVMTDPITGASRCFGFVRFADEKERRRALAEMNGVWCQGRQLRVAYAT 240
Query: 228 EMNGVLCS-------------------TRPMRIG------PAATKKAATGQQYQKATYQN 262
N +L T P +G A AA+ + Q+
Sbjct: 241 PRNNLLQQQQAHPAPPAPPSPPAPPAQTLPDSLGLLVGVPSLAQLDAASLGRAQQPLLLG 300
Query: 263 TQGSQ-GEN------------DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAG 309
GS G N D NTT+F+GGL +++ L +F +G ++ VK+P G
Sbjct: 301 AAGSLVGSNSLPLAAPRQLPADTANTTVFIGGLSNMISEGQLHALFMPFGNILSVKVPPG 360
Query: 310 KRCGFVQFANR 320
+ CGFV+F NR
Sbjct: 361 RGCGFVRFENR 371
>gi|374105894|gb|AEY94805.1| FAAR151Wp [Ashbya gossypii FDAG1]
Length = 475
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 151/371 (40%), Gaps = 112/371 (30%)
Query: 54 PPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF 113
PPS Q SS+ R+LW+GDL P +E+ I ++ G V K+IR K+
Sbjct: 9 PPSTTVQ-------TSSEPPRTLWMGDLDPSFDEATIQHVWLTVGHQVQVKLIRAKKNLL 61
Query: 114 -----------------------------------SEGYGFIEFVSHAAAERVLQTFNGT 138
GY F++F + A+ LQ N T
Sbjct: 62 IPCSTSSTLSASHVDEERIQINGVSFIDPNTTQLHHAGYCFVQFANLQEAQAGLQ-LNAT 120
Query: 139 QMPST-------------EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
+P+ ++NFRLNWA+ + P+F++FVGDL+ T+ L
Sbjct: 121 PLPNVVSPTTRNPTNPTGKRNFRLNWASGATLQSDIPATPEFSLFVGDLSPTATEAHLLS 180
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE----------------QLRSM--T 227
F+ + SVK +V+TD TG S+ +GFVRF DE E QLR T
Sbjct: 181 LFQTKFKSVKTVRVMTDPITGASRCFGFVRFADEKERRRALAEMNGVWCQGRQLRVAYAT 240
Query: 228 EMNGVLCS-------------------TRPMRIG------PAATKKAATGQQYQKATYQN 262
N +L T P +G A AA+ + Q+
Sbjct: 241 PRNNLLQQQQAHPAPPAPPSPPAPPAQTLPDSLGLLVGVPSLAQLDAASLGRAQQPLLLG 300
Query: 263 TQGSQ-GEN------------DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAG 309
GS G N D NTT+F+GGL +++ L +F +G ++ VK+P G
Sbjct: 301 AAGSLVGSNSLPLAAPRQLPADTANTTVFIGGLSNMISEGQLHALFMPFGNILSVKVPPG 360
Query: 310 KRCGFVQFANR 320
+ CGFV+F NR
Sbjct: 361 RGCGFVRFENR 371
>gi|242806685|ref|XP_002484795.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces stipitatus ATCC 10500]
gi|218715420|gb|EED14842.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces stipitatus ATCC 10500]
Length = 482
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 133/266 (50%), Gaps = 27/266 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF-SEG--YGFIEFVSHAAAER 130
R+L+IG L + E + IF TG S K+I +K NF S+G YGF+E+ AAER
Sbjct: 92 RALYIGGLDARVTEDILKQIFETTGHVQSVKIIPDK--NFQSKGMNYGFVEYDDPGAAER 149
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A
Sbjct: 150 AMQTLNGRRIHQSE--IRVNWAYQSNNSHKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA- 206
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK-KA 249
+ SV A+V+ D TGRS+GYGFV F + + +++ M+ +R +R A K +
Sbjct: 207 FGSVSEARVMWDMKTGRSRGYGFVAFREFEDAEKALKSMDREWLGSRAIRCNWANQKGQP 266
Query: 250 ATGQQYQKATYQNTQGS---------QGENDPN---------NTTIFVGGLDPSVTDDIL 291
+ QQ A T + G N + TT +VG L P T + L
Sbjct: 267 SISQQQAMAAMGMTPSAPFGHHHFPTHGANSYDMVVAQTPQWQTTCYVGNLTPYTTQNDL 326
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQF 317
+F +G +V ++ A + F++
Sbjct: 327 VPLFQNFGYVVETRLQADRGFAFLKM 352
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 7/54 (12%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI-------PAGKRCGFVQF 317
+PN +++GGLD VT+DILK +F G + VKI G GFV++
Sbjct: 88 EPNKRALYIGGLDARVTEDILKQIFETTGHVQSVKIIPDKNFQSKGMNYGFVEY 141
>gi|82400162|gb|ABB72820.1| oligouridylate binding protein-like protein [Solanum tuberosum]
Length = 417
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 145/289 (50%), Gaps = 28/289 (9%)
Query: 47 WTPQPVPPPSQQTQPYG-VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKV 105
+ P + PP + P G + P RS+++G++ P + E + +F TG K+
Sbjct: 26 YHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVFVGNIHPQVTEPLLQEVFSSTGLVEGCKL 85
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
IR ++++ YGFI + +A + + NG + Q ++NWA + +G+R +D
Sbjct: 86 IRKEKSS----YGFIHYYDRRSAALAIVSLNGRHL--FGQPIKVNWA-FASGQR-EDTSS 137
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
F IFVGDL+ +VTD +L F +VY A+V+ D+ TGRS+G+GFV F ++ + +
Sbjct: 138 HFNIFVGDLSPEVTDAMLFACF-SVYPGCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSA 196
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQG-----------EN 270
+ ++ G +R +R ATK A + Q K+ + T GS EN
Sbjct: 197 INDLTGKWLGSRQIRCN-WATKGANSNDDKQSSDAKSVVELTNGSSEDGKEAANSDAPEN 255
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQF 317
+P TT++VG + P VT L F G V ++I K GFV++
Sbjct: 256 NPQYTTVYVGNIAPEVTQLDLHRYFHALGAGVIEEIRIQRDKGFGFVRY 304
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 37/177 (20%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++GDL P + ++ + + F +V+ +++T S G+GF+ F + A+ +
Sbjct: 140 NIFVGDLSPEVTDAMLFACFSVYPGCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 199
Query: 135 FNGTQMPSTEQNFRLNWATYGAG-------------------------ERRQDDGPD--- 166
G + S + R NWAT GA E D P+
Sbjct: 200 LTGKWLGSRQ--IRCNWATKGANSNDDKQSSDAKSVVELTNGSSEDGKEAANSDAPENNP 257
Query: 167 --FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
T++VG++A +VT L F A+ GA V+ + R KG+GFVR+ +E
Sbjct: 258 QYTTVYVGNIAPEVTQLDLHRYFHAL-----GAGVIEEIRIQRDKGFGFVRYNTHAE 309
>gi|448523083|ref|XP_003868848.1| hypothetical protein CORT_0C05700 [Candida orthopsilosis Co 90-125]
gi|380353188|emb|CCG25944.1| hypothetical protein CORT_0C05700 [Candida orthopsilosis]
Length = 444
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 139/266 (52%), Gaps = 27/266 (10%)
Query: 76 LWIGDLQP-WMEESYIASIFGHTGEFV----SGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
+W+GDL P W EES I SI+ V S K++R++ Y F+ F A +
Sbjct: 79 MWMGDLDPSWTEES-IHSIWS---ALVQPPKSVKIMRDRLNPSKPSYCFVTFEDQEALDW 134
Query: 131 VLQTFNGTQMPSTEQNFRLNWATY--------GAGERRQDDGPDFTIFVGDLAADVTDYV 182
LQ NG +P++++ F+++ A+ G+G RQ G +F++F+GDLA DV +
Sbjct: 135 ALQR-NGQLIPNSQRKFKISHASAKNSTSGGAGSGHSRQSTG-EFSLFIGDLAQDVGEAA 192
Query: 183 LQETFRAVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
L TF Y + +K A+V+ D+ + KG+GFV+F +++ EM GV+ ++ +R+
Sbjct: 193 LYSTFNLKYPNQIKSARVIVDQDSKVGKGFGFVKFFTGEVMEKALKEMQGVMVGSKTIRV 252
Query: 242 GPAATKKAA-TGQQYQKATYQNTQGSQGE------NDPNNTTIFVGGLDPSVTDDILKTV 294
G AA + + K Y+ +Q + D NT I + GL T+ L+ +
Sbjct: 253 GIAAGSEVVQSSSHANKPDYKKIPITQSQPELEAGTDEKNTNISISGLSSKFTESELELM 312
Query: 295 FGQYGELVHVKIPAGKRCGFVQFANR 320
F +G+LV+ K+ + G+V+F +R
Sbjct: 313 FLTFGDLVYCKLSRDLQRGYVKFVSR 338
>gi|171687054|ref|XP_001908468.1| hypothetical protein [Podospora anserina S mat+]
gi|170943488|emb|CAP69141.1| unnamed protein product [Podospora anserina S mat+]
Length = 481
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 126/263 (47%), Gaps = 23/263 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G L P + E + IF TG + K+I +K YGF+E+ +AER +Q
Sbjct: 88 RALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNAK-GYNYGFVEYDDPGSAERAMQ 146
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ E R+NWA ++D F IFVGDL+ +V D VL + F A + S
Sbjct: 147 TLNGRRVHQAE--IRVNWAYQSNNTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 203
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V A+V+ D TGRS+GYGFV F D E ++++ M+G +R +R A K +
Sbjct: 204 VSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 263
Query: 254 QYQKATYQN-------------TQGSQGENDPNN------TTIFVGGLDPSVTDDILKTV 294
Q Q T G + N TT +VG L P T + L +
Sbjct: 264 QQQAMQQMGMTPTTPYGHHHFPTHGVHSYDMIVNQTPAWQTTCYVGNLTPYTTQNDLVPL 323
Query: 295 FGQYGELVHVKIPAGKRCGFVQF 317
F +G +V + A + F++
Sbjct: 324 FQNFGFVVESRFQADRGFAFIKM 346
>gi|403416664|emb|CCM03364.1| predicted protein [Fibroporia radiculosa]
Length = 948
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 113/225 (50%), Gaps = 49/225 (21%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTG-EFVSGKVIR-------NKQTNFSEGYGFIEFVSHA 126
+LW G+L+PWM+E Y + G + V+ KV R +Q N + GY F+ F S A
Sbjct: 219 TLWWGELEPWMDEEYAKQVCNLMGWDPVNIKVPRPPPDTVTGQQAN-NPGYCFLTFPSQA 277
Query: 127 AAERVLQTFNGTQ------MPSTEQNFRLNW-----------------ATYGAGERRQDD 163
A VL N + MP++ + F LNW AT G+ Q
Sbjct: 278 HAASVLSQINSSSNSPAMIMPNSSKPFSLNWTSSIPSPPVASALPGQTATLQTGQNPQYP 337
Query: 164 GPDFTIFVGDLAADVTDYVLQETFRAV---------------YSSVKGAKVVTDRTTGRS 208
+++IFVGDLA +V++ L FR + S K AK++ D TG S
Sbjct: 338 K-EYSIFVGDLAPEVSNSDLVAVFRNPVLGLRNDREPRFIRPFLSCKSAKIMLDPVTGVS 396
Query: 209 KGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK-KAATG 252
+GYGFVRF DE++Q R++ EM+G+ C +RPMRI PA K K A G
Sbjct: 397 RGYGFVRFTDETDQQRALIEMHGLYCLSRPMRISPATAKFKPAPG 441
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 45/68 (66%), Gaps = 4/68 (5%)
Query: 257 KATYQNTQGSQGE----NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+A N G GE +DP NTT+FVGGL P ++++ L+T F +G++ +VK+P GK C
Sbjct: 592 RAILSNLIGPNGEQLTSSDPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHC 651
Query: 313 GFVQFANR 320
GFVQF +
Sbjct: 652 GFVQFVRK 659
>gi|255760009|ref|NP_001157550.1| nucleolysin TIA-1 isoform 2 [Mus musculus]
gi|28386187|gb|AAH46812.1| Tia1 protein [Mus musculus]
Length = 377
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 133/248 (53%), Gaps = 5/248 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + +T ++ Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALA 66
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 67 AMNGRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAF-APFGR 122
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 123 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS 182
Query: 254 QYQKATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Y+ T Q + ++ PNN T++ GG+ +T+ +++ F +G+++ +++ K
Sbjct: 183 TYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGY 242
Query: 313 GFVQFANR 320
FV+F++
Sbjct: 243 SFVRFSSH 250
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 99 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 158
Query: 136 NGTQMPSTEQNFRLNWAT---------YGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWAT Y + ++ Q + T++ G + + +
Sbjct: 159 GGQWLGGRQ--IRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGL 216
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 217 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSVNG 262
>gi|357626972|gb|EHJ76844.1| tRNA selenocysteine associated protein [Danaus plexippus]
Length = 282
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 103/174 (59%), Gaps = 6/174 (3%)
Query: 78 IGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFN 136
+G L+P M ES+I + F G+ ++ KV+RNK T GY F+ F + A + N
Sbjct: 1 MGSLEPNMTESFILAAFHRMGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDTMHKLN 60
Query: 137 GTQMPST--EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
G +P T FRLN A+ A Q + +F+++VGDL+ADV DY L F A YSS+
Sbjct: 61 GKPIPGTFPVVRFRLNTASREARANMQQER-EFSVWVGDLSADVDDYSLYRVFAAKYSSI 119
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
K AKV+ D ++G +KGYGFVRFG+E EQ ++ MNG ++P++I A K
Sbjct: 120 KTAKVILD-SSGYTKGYGFVRFGNEDEQRNALYAMNGYTGLGSKPLKICTAVPK 172
>gi|147797981|emb|CAN65009.1| hypothetical protein VITISV_027348 [Vitis vinifera]
Length = 420
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 145/289 (50%), Gaps = 28/289 (9%)
Query: 47 WTPQPVPPPSQQTQPYG-VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKV 105
+ P + PP + P G + P S RS+++G++ + E + +F TG K+
Sbjct: 25 YHPGLLAPPQIEPIPSGNLPPGFDSSTCRSVYVGNIHTQVSEPLLQEVFASTGPVEGCKL 84
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
+R ++++ YGFI + +A + + NG + Q ++NWA Y +G+R +D
Sbjct: 85 VRKEKSS----YGFIHYFDRRSAALAILSLNGRHL--FGQPIKVNWA-YASGQR-EDTSG 136
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
F IFVGDL+ +VTD L F +V+ S A+V+ D+ TGRS+G+GFV F ++ +
Sbjct: 137 HFNIFVGDLSPEVTDATLFACF-SVFPSCSDARVMWDQKTGRSRGFGFVSFRNQQVAQSA 195
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQG-----------EN 270
+ ++ G +R +R ATK A + Q K+ + T GS +N
Sbjct: 196 INDITGKWLGSRQIRCN-WATKGAGSNDDKQSSDAKSVVELTNGSSEDGKETATNEAPDN 254
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQF 317
+P TT++VG L P VT L F +G V V++ K GFV++
Sbjct: 255 NPQYTTVYVGNLAPEVTQLDLHRHFHTFGAGVIEEVRVQRDKGFGFVRY 303
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 40/204 (19%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
+ G ++++GDL P + ++ + + F +V+ +++T S G+GF+ F + A+
Sbjct: 134 TSGHFNIFVGDLSPEVTDATLFACFSVFPSCSDARVMWDQKTGRSRGFGFVSFRNQQVAQ 193
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYGAG-------------------------ERRQDDG 164
+ G + S + R NWAT GAG E ++
Sbjct: 194 SAINDITGKWLGSRQ--IRCNWATKGAGSNDDKQSSDAKSVVELTNGSSEDGKETATNEA 251
Query: 165 PD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDE 219
PD T++VG+LA +VT L F GA V+ + R KG+GFVR+
Sbjct: 252 PDNNPQYTTVYVGNLAPEVTQLDLHRHFHTF-----GAGVIEEVRVQRDKGFGFVRYNTH 306
Query: 220 SEQLRS--MTEMNGVLCSTRPMRI 241
+E + M +LC +P++
Sbjct: 307 AEAALAIQMGNTQSILCG-KPIKC 329
>gi|363750388|ref|XP_003645411.1| hypothetical protein Ecym_3082 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889045|gb|AET38594.1| Hypothetical protein Ecym_3082 [Eremothecium cymbalariae
DBVPG#7215]
Length = 586
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 112/248 (45%), Gaps = 50/248 (20%)
Query: 56 SQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF-- 113
SQ QP S + R+LW+GDL P +E+ I I+ G V K+IR K+
Sbjct: 4 SQIPQPPSTTIQTSDEPPRTLWMGDLDPSFDETTIQQIWMTLGHQVQVKLIRAKKNLLIP 63
Query: 114 ----------------------------------SEGYGFIEFVSHAAAERVLQTFNGTQ 139
GY F++F S A+ LQ N T
Sbjct: 64 CSTSSTLASSQHVEDERIQINGVSFIDPNTTQLHHAGYCFVQFPSLQEAQAGLQ-LNSTP 122
Query: 140 MP-------------STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQET 186
+P + ++NFRLNWA+ + P+F++FVGDL+ T+ L
Sbjct: 123 LPNLISSTTHNPTNPTAKRNFRLNWASGATLQSDIPTTPEFSLFVGDLSPTATEAHLLSL 182
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
F+ + SVK +V+TD TG S+ +GFVRF DE E+ R++ EMNG+ C R +R+ A
Sbjct: 183 FQTKFKSVKTVRVMTDPITGASRCFGFVRFADEQERRRALVEMNGIWCQGRQLRVAYATP 242
Query: 247 KKAATGQQ 254
+ QQ
Sbjct: 243 RNNILQQQ 250
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 40/53 (75%)
Query: 268 GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
G DP+NTT+F+GGL+ +T+ L+++F +G ++ VK+P GK CGFV+F +R
Sbjct: 391 GYTDPSNTTVFIGGLNNQITESQLQSLFMPFGNILSVKVPPGKGCGFVKFEHR 443
>gi|389639074|ref|XP_003717170.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Magnaporthe oryzae 70-15]
gi|351642989|gb|EHA50851.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Magnaporthe oryzae 70-15]
gi|440475727|gb|ELQ44390.1| nucleolysin TIA-1 [Magnaporthe oryzae Y34]
gi|440486439|gb|ELQ66302.1| nucleolysin TIA-1 [Magnaporthe oryzae P131]
Length = 479
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 131/264 (49%), Gaps = 24/264 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G L + E + IF TG + K+I +K YGF+E+ AA+R +Q
Sbjct: 85 RALYVGGLDARVTEDVLRQIFETTGHVQNVKIIPDKNAK-GYNYGFVEYDDPGAADRAMQ 143
Query: 134 TFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
T NG ++ +E R+NWA A ++D F IFVGDL+ +V D VL + F +V+
Sbjct: 144 TLNGRRVHQSE--IRVNWAYQAATSATKEDTSNHFHIFVGDLSNEVNDEVLTQAF-SVFG 200
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SV A+V+ D TGRS+GYGFV F D S+ ++++ M+G +R +R A K +
Sbjct: 201 SVSEARVMWDMKTGRSRGYGFVAFRDRSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSI 260
Query: 253 QQYQKAT-------------YQNTQGSQ------GENDPNNTTIFVGGLDPSVTDDILKT 293
Q Q + + T G Q + TT +VG L P T + +
Sbjct: 261 AQQQAMSAVGMTPTTPFGHHHFPTHGMQSYEMVVNQTPAYQTTCYVGNLTPYTTANDVVP 320
Query: 294 VFGQYGELVHVKIPAGKRCGFVQF 317
+F +G +V + A + F++
Sbjct: 321 LFQNFGYVVESRFQADRGFAFIKM 344
>gi|225444661|ref|XP_002276983.1| PREDICTED: nucleolysin TIAR isoform 1 [Vitis vinifera]
Length = 429
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 144/292 (49%), Gaps = 36/292 (12%)
Query: 52 VPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQT 111
PP + + P S RS+++G++ P + E + +F TG K+IR +++
Sbjct: 32 APPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKLIRKEKS 91
Query: 112 NFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFV 171
+ YGF+++ +A + T NG + Q ++NWA A +R+D + IFV
Sbjct: 92 S----YGFVDYFDRRSAALSIVTLNGRHL--FGQPIKVNWAY--ASSQREDTSGHYNIFV 143
Query: 172 GDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
GDL+ +VTD L F +VY S A+V+ D+ TGRS+G+GFV F ++ E ++ ++NG
Sbjct: 144 GDLSPEVTDATLFACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLNG 202
Query: 232 VLCSTRPMRIGPAATKKAATGQQYQ-----KATYQNTQGSQGE------------ND--P 272
+R +R A K A G + + K+ + T G+ GE ND P
Sbjct: 203 RWLGSRQIRCNWAT--KGAGGNEDKPNSDAKSVVELTNGTSGEVIYGIQNGKDKSNDEAP 260
Query: 273 NN----TTIFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFA 318
N TT++VG L P VT L F G + V++ K GFV+++
Sbjct: 261 ENNLQYTTVYVGNLAPEVTSVDLHRHFHALGAGAIEDVRVQRDKGFGFVRYS 312
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 44/209 (21%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
+ G ++++GDL P + ++ + + F +V+ +++T S G+GF+ F + A+
Sbjct: 135 TSGHYNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQ 194
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYGAG-------------------------------- 157
+ NG + S + R NWAT GAG
Sbjct: 195 SAINDLNGRWLGSRQ--IRCNWATKGAGGNEDKPNSDAKSVVELTNGTSGEVIYGIQNGK 252
Query: 158 ERRQDDGPD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYG 212
++ D+ P+ T++VG+LA +VT L F A+ GA + D R KG+G
Sbjct: 253 DKSNDEAPENNLQYTTVYVGNLAPEVTSVDLHRHFHAL-----GAGAIEDVRVQRDKGFG 307
Query: 213 FVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
FVR+ +E ++ N + +P++
Sbjct: 308 FVRYSTHAEAALAIQMGNARILCGKPIKC 336
>gi|148666754|gb|EDK99170.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_d
[Mus musculus]
Length = 385
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 133/248 (53%), Gaps = 5/248 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + +T ++ Y F+EF H A L
Sbjct: 15 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALA 74
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 75 AMNGRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAF-APFGR 130
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 131 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS 190
Query: 254 QYQKATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Y+ T Q + ++ PNN T++ GG+ +T+ +++ F +G+++ +++ K
Sbjct: 191 TYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGY 250
Query: 313 GFVQFANR 320
FV+F++
Sbjct: 251 SFVRFSSH 258
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 107 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 166
Query: 136 NGTQMPSTEQNFRLNWAT---------YGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWAT Y + ++ Q + T++ G + + +
Sbjct: 167 GGQWLGGRQ--IRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGL 224
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 225 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSVNG 270
>gi|259648115|dbj|BAI40365.1| TIA-1 homologue [Bombyx mori]
Length = 402
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 129/253 (50%), Gaps = 12/253 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L P + E ++ ++FG G+ K+IR ++ Y F+EF H AA L
Sbjct: 8 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPG---NDPYAFLEFTCHTAAVTALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N + ++ ++NWAT + + D IFVGDL+ ++ +L+E F A +
Sbjct: 65 AMNKRVV--LDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ ++V D T +SKGY FV F +++ ++ MNG +R +R + K A G
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGV 181
Query: 254 Q-----YQKATYQNTQGSQGENDPNNTTIFVGGLDPS-VTDDILKTVFGQYGELVHVKIP 307
++A ++ P NTT++ GG + +T+++++ F Q+G++ +++
Sbjct: 182 NEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVF 241
Query: 308 AGKRCGFVQFANR 320
K F++F +
Sbjct: 242 RDKGYAFIRFTTK 254
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 31/176 (17%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + + F GE + +++R+ QT S+GY F+ F
Sbjct: 85 GNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 144
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATY---------GAGERRQDDGPDF------ 167
V A AE +Q NG + S ++ R NW+T GA ++ P F
Sbjct: 145 VKKADAEAAIQAMNGQWLGS--RSIRTNWSTRKPPAKGVNEGAPSSKRAKQPTFDEVYNQ 202
Query: 168 ------TIFVGDLAAD-VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRF 216
T++ G ++ +T+ ++Q TF + + ++ +V R KGY F+RF
Sbjct: 203 SSPTNTTVYCGGFTSNIITEELMQNTF-SQFGQIQDIRVF------RDKGYAFIRF 251
>gi|332808237|ref|XP_001141981.2| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Pan
troglodytes]
Length = 255
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 103/177 (58%), Gaps = 36/177 (20%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T A+R
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLT--------------GPAKR--- 46
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY S
Sbjct: 47 -------------FKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPS 90
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
+G KVV D+ TG SKGYGFV+F DE EQ R++TE G + ++P+R+ A K +
Sbjct: 91 CRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 146
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 62 YGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIE 121
YG PD S + SL++GDL P +++ + F G + QT S+GYGF++
Sbjct: 54 YGKQPDNSPE--YSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVK 111
Query: 122 FVSHAAAERVLQTFNG 137
F +R L G
Sbjct: 112 FTDELEQKRALTECQG 127
>gi|449453379|ref|XP_004144435.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 422
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 146/291 (50%), Gaps = 32/291 (10%)
Query: 47 WTPQPVPPPSQQTQPYGVAP---DASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSG 103
+ P + PP + P G P DAS+ RS+++G++ + E + +FG G
Sbjct: 25 YHPGLLAPPQIEPIPSGNLPPGFDAST--CRSVYVGNIHIQVTEPLLQEVFGSIGPVEGC 82
Query: 104 KVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDD 163
K++R ++++ YGF+ + +A + + NG + Q ++NWA A +R+D
Sbjct: 83 KLVRKEKSS----YGFVHYFDRRSAALAILSLNGRHL--FGQPIKVNWAY--ASSQREDT 134
Query: 164 GPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQL 223
F IFVGDL+ +VTD +L F A YSS A+V+ D+ TGRS+G+GFV F ++ E
Sbjct: 135 SGHFNIFVGDLSPEVTDAMLFACFSA-YSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQ 193
Query: 224 RSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQ--GENDPNN--- 274
++ ++ G +R +R AA K A + Q K+ + + GS G+ NN
Sbjct: 194 NAINDLTGKWLGSRQIRCNWAA-KGAGVNEDKQGSDTKSVVELSNGSSEDGKESVNNDAP 252
Query: 275 ------TTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQF 317
TT++VG L P V+ L F G V V+I K GFV++
Sbjct: 253 ENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGFVRY 303
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 39/212 (18%)
Query: 55 PSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFS 114
P + Y + + G ++++GDL P + ++ + + F +V+ +++T S
Sbjct: 119 PIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRS 178
Query: 115 EGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAG----------------- 157
G+GF+ F + A+ + G + S + R NWA GAG
Sbjct: 179 RGFGFVSFRNQQEAQNAINDLTGKWLGSRQ--IRCNWAAKGAGVNEDKQGSDTKSVVELS 236
Query: 158 --------ERRQDDGPD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRT 204
E +D P+ T++VG+LA +V+ L F ++ GA V+ +
Sbjct: 237 NGSSEDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSL-----GAGVIEEVR 291
Query: 205 TGRSKGYGFVRFGDESEQLRS--MTEMNGVLC 234
R KG+GFVR+ +E + M LC
Sbjct: 292 IQRDKGFGFVRYNTHAEAALAIQMGNTRSFLC 323
>gi|325089595|gb|EGC42905.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Ajellomyces capsulatus H88]
Length = 492
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 125/263 (47%), Gaps = 23/263 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L+IG L + E + IF TG S K+I +K + YGF+E+ AAER +
Sbjct: 92 RALYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNSK-GLNYGFVEYDDPGAAERAMS 150
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A + S
Sbjct: 151 TLNGRRVHQSE--IRVNWAYQSNNNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 207
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V A+V+ D TGRS+GYGFV F + + ++++ M+G +R +R A K +
Sbjct: 208 VSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 267
Query: 254 QYQKATYQN-------------TQGSQ------GENDPNNTTIFVGGLDPSVTDDILKTV 294
Q Q T G Q + TT +VG L P T + L +
Sbjct: 268 QQQAMAAMGMTPSTPFGHHHFPTHGVQSYDMVAAQTPQWQTTCYVGNLTPYTTQNDLIPL 327
Query: 295 FGQYGELVHVKIPAGKRCGFVQF 317
F +G +V + + FV+
Sbjct: 328 FQNFGYVVETRFQTDRGFAFVKM 350
>gi|212538447|ref|XP_002149379.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces marneffei ATCC 18224]
gi|210069121|gb|EEA23212.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces marneffei ATCC 18224]
Length = 482
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 131/266 (49%), Gaps = 27/266 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF-SEG--YGFIEFVSHAAAER 130
R+L+IG L + E + IF TG S K+I +K NF S+G YGF+E+ AAER
Sbjct: 91 RALYIGGLDARVTEDILKQIFETTGHVQSVKIIPDK--NFQSKGMNYGFVEYDDPGAAER 148
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A
Sbjct: 149 AMQTLNGRRIHQSE--IRVNWAYQSNNTHKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA- 205
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK--- 247
+ SV A+V+ D TGRS+GYGFV F + + +++ M+ +R +R A K
Sbjct: 206 FGSVSEARVMWDMKTGRSRGYGFVAFREFEDAEKALKSMDREWLGSRAIRCNWANQKGQP 265
Query: 248 -------KAATGQQYQKATYQNTQGSQGENDPN---------NTTIFVGGLDPSVTDDIL 291
AA G + + G N + TT +VG L P T + L
Sbjct: 266 SISQQQAMAAMGMTPTAPFGHHHFPTHGANSYDMVVAQTPQWQTTCYVGNLTPYTTQNDL 325
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQF 317
+F +G +V ++ A + F++
Sbjct: 326 VPLFQNFGYVVETRLQADRGFAFLKM 351
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 7/54 (12%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI-------PAGKRCGFVQF 317
+PN +++GGLD VT+DILK +F G + VKI G GFV++
Sbjct: 87 EPNKRALYIGGLDARVTEDILKQIFETTGHVQSVKIIPDKNFQSKGMNYGFVEY 140
>gi|302772731|ref|XP_002969783.1| hypothetical protein SELMODRAFT_64568 [Selaginella moellendorffii]
gi|302806762|ref|XP_002985112.1| hypothetical protein SELMODRAFT_44478 [Selaginella moellendorffii]
gi|300146940|gb|EFJ13606.1| hypothetical protein SELMODRAFT_44478 [Selaginella moellendorffii]
gi|300162294|gb|EFJ28907.1| hypothetical protein SELMODRAFT_64568 [Selaginella moellendorffii]
Length = 425
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 139/278 (50%), Gaps = 38/278 (13%)
Query: 67 DASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHA 126
DA+S RS+++G++ + E+ +A +F G K+I+ ++++ YGF+++ H
Sbjct: 50 DATS--CRSVYVGNIHIKVTEALLAEVFATVGPLEGCKLIKKEKSS----YGFVDYFDHR 103
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQET 186
+A + T NG + Q+ ++NWA Y +G+R G + IFVGDL+ +VTD L
Sbjct: 104 SAAAAIITLNGKLIFG--QSIKVNWA-YASGQREDTTG-HYNIFVGDLSPEVTDATLYAA 159
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI----- 241
F +Y A+V+ D+ +GRS+GYGFV F + E R++ EMNG +RP+R
Sbjct: 160 F-FMYPGCSDARVMWDQRSGRSRGYGFVSFRSKQEAERAINEMNGKWLGSRPIRCNWATK 218
Query: 242 -----------GPAATKK--AATGQQYQKATYQNTQGSQG-------ENDPNNTTIFVGG 281
GP + + A Q ++ + Q G EN+P TT++VG
Sbjct: 219 STGSQEDVPTPGPVSVPEQVAVVQVQMKQEPNHDEQHEDGAMQLDGPENNPQFTTVYVGN 278
Query: 282 LDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQF 317
L VT L F G V V++ K GFV++
Sbjct: 279 LAHEVTQTELHRQFHALGVGVIEDVRVQKEKGFGFVRY 316
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 49/205 (23%)
Query: 72 GIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
G ++++GDL P + ++ + + F +V+ ++++ S GYGF+ F S AER
Sbjct: 138 GHYNIFVGDLSPEVTDATLYAAFFMYPGCSDARVMWDQRSGRSRGYGFVSFRSKQEAERA 197
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAG-------------------------------ERR 160
+ NG + S + R NWAT G E+
Sbjct: 198 INEMNGKWLGS--RPIRCNWATKSTGSQEDVPTPGPVSVPEQVAVVQVQMKQEPNHDEQH 255
Query: 161 QD-----DGPD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKG 210
+D DGP+ T++VG+LA +VT L F A+ G V+ D + KG
Sbjct: 256 EDGAMQLDGPENNPQFTTVYVGNLAHEVTQTELHRQFHAL-----GVGVIEDVRVQKEKG 310
Query: 211 YGFVRFGDESEQLRSMTEMNG-VLC 234
+GFVR+ E ++ NG V+C
Sbjct: 311 FGFVRYRTHEEAAYAIQAANGRVIC 335
>gi|38141765|dbj|BAD00701.1| TIA-1 homologue [Bombyx mori]
Length = 388
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 129/253 (50%), Gaps = 12/253 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L P + E ++ ++FG G+ K+IR ++ Y F+EF H AA L
Sbjct: 8 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPG---NDPYAFLEFTCHTAAVTALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N + ++ ++NWAT + + D IFVGDL+ ++ +L+E F A +
Sbjct: 65 AMNKRVV--LDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ ++V D T +SKGY FV F +++ ++ MNG +R +R + K A G
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGV 181
Query: 254 Q-----YQKATYQNTQGSQGENDPNNTTIFVGGLDPS-VTDDILKTVFGQYGELVHVKIP 307
++A ++ P NTT++ GG + +T+++++ F Q+G++ +++
Sbjct: 182 NEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVF 241
Query: 308 AGKRCGFVQFANR 320
K F++F +
Sbjct: 242 RDKGYAFIRFTTK 254
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 31/176 (17%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + + F GE + +++R+ QT S+GY F+ F
Sbjct: 85 GNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 144
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATY---------GAGERRQDDGPDF------ 167
V A AE +Q NG + S ++ R NW+T GA ++ P F
Sbjct: 145 VKKADAEAAIQAMNGQWLGS--RSIRTNWSTRKPPAKGVNEGAPSSKRAKQPTFDEVYNQ 202
Query: 168 ------TIFVGDLAAD-VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRF 216
T++ G ++ +T+ ++Q TF + + ++ +V R KGY F+RF
Sbjct: 203 SSPTNTTVYCGGFTSNIITEELMQNTF-SQFGQIQDIRVF------RDKGYAFIRF 251
>gi|154269845|ref|XP_001535826.1| hypothetical protein HCAG_09244 [Ajellomyces capsulatus NAm1]
gi|150409464|gb|EDN04912.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 387
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 126/263 (47%), Gaps = 23/263 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L+IG L + E + IF TG S K+I +K + YGF+E+ AAER +
Sbjct: 92 RALYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNSK-GLNYGFVEYDDPGAAERAMS 150
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A + S
Sbjct: 151 TLNGRRVHQSE--IRVNWAYQSNNNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 207
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V A+V+ D TGRS+GYGFV F + + ++++ M+G +R +R A K +
Sbjct: 208 VSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 267
Query: 254 QYQKATYQN-------------TQGSQGEN-----DPN-NTTIFVGGLDPSVTDDILKTV 294
Q Q T G Q + P TT +VG L P T + L +
Sbjct: 268 QQQAMAAMGMTPSTPFGHHHFPTHGVQSYDMVAAQTPQWQTTCYVGNLTPYTTQNDLIPL 327
Query: 295 FGQYGELVHVKIPAGKRCGFVQF 317
F +G +V + + FV+
Sbjct: 328 FQNFGYVVETRFQTDRGFRFVKM 350
>gi|194856103|ref|XP_001968677.1| GG24374 [Drosophila erecta]
gi|190660544|gb|EDV57736.1| GG24374 [Drosophila erecta]
Length = 336
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 105/179 (58%), Gaps = 13/179 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+ +M E++I + F GE + +++RNK T GY F+ F+S A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 135 FNGTQMPSTE--QNFRLNWATYGA---GERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
NG +P T FRLN A+ G R+ F+++VGDL++DV DY L + F +
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE-----FSVWVGDLSSDVDDYQLYKVFSS 122
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
++S+K AKV+ D + G SKGYGFVRFG E EQ ++ +MNG + T+P++I A K
Sbjct: 123 KFTSIKTAKVILD-SLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPK 180
>gi|405119959|gb|AFR94730.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Cryptococcus neoformans var. grubii H99]
Length = 434
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 144/298 (48%), Gaps = 48/298 (16%)
Query: 62 YGVAPDASSDGIR--SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG--- 116
YG+ P S++ + L++G+L P + + + IF G VS K+I+++ NF G
Sbjct: 8 YGITPGQSAEAPKRPHLYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDR--NFQHGGFN 65
Query: 117 YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
YGF+E+ +A++ L T NG ++ E R+NWA Y + ++D + +FVGDL+
Sbjct: 66 YGFVEYADMRSADQALTTLNGRKIFDAE--IRVNWA-YQGNQNKEDTQHHYHVFVGDLSP 122
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+V D VL + F A + S+ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +
Sbjct: 123 EVNDDVLSKAFGA-FGSLSEARVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLGS 181
Query: 237 RPMRIGPAATKKAATGQQYQKATYQNTQGSQG---------------------------- 268
R +R+ A K G + AT + S G
Sbjct: 182 RAIRVNWANQKTQTGGTRTGGATPSYSAPSMGAPPAPAGIPSAYGAPVPGVVPGVGVGGA 241
Query: 269 ---------ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
+ NTT++VG L P T L +F YG +V +++ A + FV+
Sbjct: 242 VGSYETVASQTPEFNTTVYVGNLIPYTTQADLIPLFQGYGYIVEIRMQADRGFAFVKL 299
>gi|344301504|gb|EGW31816.1| hypothetical protein SPAPADRAFT_56576 [Spathaspora passalidarum
NRRL Y-27907]
Length = 632
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 127/237 (53%), Gaps = 33/237 (13%)
Query: 51 PVPPPSQQTQPYGVAPDASSDG----IRSLWIGDLQPWMEESYIASIFGHT-GEFVSGKV 105
P PP S Q VA D ++D R+LW+GDL PW++E I ++ + + V K+
Sbjct: 67 PNPPVSTQQSSAVVAADNNTDSDYERPRTLWMGDLDPWLDEQGITDLWWNILHKRVVVKI 126
Query: 106 IRNKQT------NF----SEGYGFIEFVSHAAAERVLQTFNGTQMPST------------ 143
I+ K + N+ + GY F+EF + A++ L + NG +P
Sbjct: 127 IKPKSSISNLDPNYQGLTNSGYCFVEFETFEDAQQAL-SLNGQLLPDIAMPSQQHFPNNP 185
Query: 144 ---EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY-SSVKGAKV 199
++ FRLNWA+ P++++FVGDL+A T+ L F+ + +S+K +V
Sbjct: 186 DNQKKYFRLNWASGATLTAPIIQTPEYSLFVGDLSASTTEAHLLAFFQKSFPNSIKTVRV 245
Query: 200 VTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ 256
+TD +G+S+ +GFVRF DESE+ R++ EMNGV + RP+R+ AT + +Y+
Sbjct: 246 MTDPISGKSRCFGFVRFTDESERQRALVEMNGVWFAGRPLRVA-LATPRTNPRNKYE 301
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 37/57 (64%)
Query: 264 QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
Q +Q DP NTT+FVGGL V++ L T+F +G + VKIP GK CGFV++ R
Sbjct: 377 QLAQPYADPTNTTVFVGGLSSEVSEPTLFTLFKPFGIIQQVKIPPGKNCGFVKYTTR 433
>gi|347839348|emb|CCD53920.1| similar to nuclear and cytoplasmic polyadenylated RNA-binding
protein pub1 [Botryotinia fuckeliana]
Length = 506
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 129/267 (48%), Gaps = 26/267 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF--SEG--YGFIEFVSHAAAE 129
R+L++G L P + E + IF TG + K+I +K S+G YGF+E+ AAE
Sbjct: 89 RALYVGGLDPRVTEEILRQIFETTGHVQNVKIIPDKNVGAVQSKGFNYGFVEYDDPGAAE 148
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
R +QT NG ++ E R+NWA ++D F IFVGDL+ +V D VL + F A
Sbjct: 149 RAMQTLNGRRVHQAE--IRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA 206
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA 249
+ SV A+V+ D TGRS+GYGF F + + ++++ M+G +R +R A K
Sbjct: 207 -FGSVSEARVMWDMKTGRSRGYGFAAFRERQDAEKALSSMDGEWLGSRAIRCNWANQKGQ 265
Query: 250 ATGQQYQKATYQN-------------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDI 290
+ Q Q + T G Q + P TT +VG L P T
Sbjct: 266 PSISQQQAMSAMGMTPTTPFGHHHFPTHGVQSYDMIVQQTPQWQTTCYVGNLTPYTTQQD 325
Query: 291 LKTVFGQYGELVHVKIPAGKRCGFVQF 317
L +F +G +V + + + FV+
Sbjct: 326 LVPLFQNFGYVVETRFQSDRGFAFVKM 352
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQ 316
+PN ++VGGLDP VT++IL+ +F G + +VKI K G VQ
Sbjct: 85 EPNKRALYVGGLDPRVTEEILRQIFETTGHVQNVKIIPDKNVGAVQ 130
>gi|389742195|gb|EIM83382.1| polyadenylate-binding protein [Stereum hirsutum FP-91666 SS1]
Length = 422
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 140/282 (49%), Gaps = 31/282 (10%)
Query: 60 QPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG--- 116
P G++ A + L++G+L P + E + IF G K+I ++ N+ G
Sbjct: 2 NPMGMSGAAEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLN 59
Query: 117 YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
YGF+E++ AAE LQT NG ++ TE R+NWA Y + ++D F +FVGDL+
Sbjct: 60 YGFVEYMDMRAAETALQTLNGRKIFDTE--IRVNWA-YQGQQNKEDTSNHFHVFVGDLSP 116
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+V D VL + F A + ++ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +
Sbjct: 117 EVNDDVLAKAF-AAFGTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGS 175
Query: 237 RPMRI---------------GPAA--TKKAATGQ----QYQKATYQNTQGSQGENDPNNT 275
R +R+ GP A T+ A G +Q Q + NT
Sbjct: 176 RAIRVNWANQKTQGGLPVSGGPTASPTRTGAGGAPAPINFQGGPLSYESVVQ-QTPAFNT 234
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
T++VG L P T L +F G L +++ A + FV+
Sbjct: 235 TVYVGNLVPYCTQSDLIPLFQSIGYLSEIRMQADRGFAFVKL 276
>gi|89272716|emb|CAJ83609.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
Length = 389
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 132/258 (51%), Gaps = 16/258 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I + N + Y F+EF H A L
Sbjct: 7 RTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGN--DPYCFVEFFEHRHAAASLA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPD----------FTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ + F +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITTDDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TTG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQNT-QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ T Q T + ++ P+N T++ GG+ +T+ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTYESNTKQLTYEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 303 HVKIPAGKRCGFVQFANR 320
V++ K FV+F++
Sbjct: 242 EVRVFPDKGYSFVRFSSH 259
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 35/199 (17%)
Query: 59 TQPYGVAPDASSDGIRS---------LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNK 109
T P DA+S + S +++GDL P + I + F G +V+++
Sbjct: 82 TTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITTDDIKAAFAPFGRISDARVVKDM 141
Query: 110 QTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWAT---------YGAGERR 160
T S+GYGF+ F + AE + G + + R NWAT Y + ++
Sbjct: 142 TTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQ--IRTNWATRKPPAPKSTYESNTKQ 199
Query: 161 --------QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYG 212
Q + T++ G + + +T+ ++++TF + + + +V D KGY
Sbjct: 200 LTYEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTF-SPFGQIMEVRVFPD------KGYS 252
Query: 213 FVRFGDESEQLRSMTEMNG 231
FVRF ++ +NG
Sbjct: 253 FVRFSSHESAAHAIVSVNG 271
>gi|195159506|ref|XP_002020619.1| GL15405 [Drosophila persimilis]
gi|198475233|ref|XP_001356977.2| GA13731 [Drosophila pseudoobscura pseudoobscura]
gi|194117569|gb|EDW39612.1| GL15405 [Drosophila persimilis]
gi|198138730|gb|EAL34043.2| GA13731 [Drosophila pseudoobscura pseudoobscura]
Length = 339
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 105/179 (58%), Gaps = 13/179 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+ +M E++I + F GE + +++RNK T GY F+ F+S A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 135 FNGTQMPSTE--QNFRLNWATYGA---GERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
NG +P T FRLN A+ G R+ F+++VGDL++DV DY L + F +
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE-----FSVWVGDLSSDVDDYQLYKIFSS 122
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
++S+K AKV+ D + G SKGYGFVRFG E EQ ++ +MNG + T+P++I A K
Sbjct: 123 KFTSIKTAKVILD-SLGFSKGYGFVRFGIEDEQKSALYDMNGFIGLGTKPIKICNAVPK 180
>gi|297738530|emb|CBI27775.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 141/285 (49%), Gaps = 29/285 (10%)
Query: 52 VPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQT 111
PP + + P S RS+++G++ P + E + +F TG K+IR +++
Sbjct: 32 APPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKLIRKEKS 91
Query: 112 NFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFV 171
+ YGF+++ +A + T NG + Q ++NWA A +R+D + IFV
Sbjct: 92 S----YGFVDYFDRRSAALSIVTLNGRHL--FGQPIKVNWAY--ASSQREDTSGHYNIFV 143
Query: 172 GDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
GDL+ +VTD L F +VY S A+V+ D+ TGRS+G+GFV F ++ E ++ ++NG
Sbjct: 144 GDLSPEVTDATLFACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLNG 202
Query: 232 VLCSTRPMRIGPAATKKAATGQQYQ-----KATYQNTQGSQG-----------ENDPNNT 275
+R +R A K A G + + K+ + T G+ EN+ T
Sbjct: 203 RWLGSRQIRCNWAT--KGAGGNEDKPNSDAKSVVELTNGTSEDGKDKSNDEAPENNLQYT 260
Query: 276 TIFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFA 318
T++VG L P VT L F G + V++ K GFV+++
Sbjct: 261 TVYVGNLAPEVTSVDLHRHFHALGAGAIEDVRVQRDKGFGFVRYS 305
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 109/252 (43%), Gaps = 37/252 (14%)
Query: 55 PSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFS 114
P + Y + + G ++++GDL P + ++ + + F +V+ +++T S
Sbjct: 120 PIKVNWAYASSQREDTSGHYNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRS 179
Query: 115 EGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAG----------------- 157
G+GF+ F + A+ + NG + S + R NWAT GAG
Sbjct: 180 RGFGFVSFRNQQEAQSAINDLNGRWLGS--RQIRCNWATKGAGGNEDKPNSDAKSVVELT 237
Query: 158 --------ERRQDDGPD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRT 204
++ D+ P+ T++VG+LA +VT L F A+ GA + D
Sbjct: 238 NGTSEDGKDKSNDEAPENNLQYTTVYVGNLAPEVTSVDLHRHFHAL-----GAGAIEDVR 292
Query: 205 TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQ 264
R KG+GFVR+ +E ++ N + +P++ G ++ T Y Q T
Sbjct: 293 VQRDKGFGFVRYSTHAEAALAIQMGNARILCGKPIKKGCPRLRQKTTPSLYMVLMGQQTY 352
Query: 265 GSQGENDPNNTT 276
S+ + P++ T
Sbjct: 353 SSRDKLHPSSPT 364
>gi|45361397|ref|NP_989276.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
gi|39795756|gb|AAH64164.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
Length = 386
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 132/258 (51%), Gaps = 16/258 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I + N + Y F+EF H A L
Sbjct: 7 RTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGN--DPYCFVEFFEHRHAAASLA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPD----------FTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ + F +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITTDDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TTG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQNT-QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ T Q T + ++ P+N T++ GG+ +T+ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTYESNTKQLTYEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 303 HVKIPAGKRCGFVQFANR 320
V++ K FV+F++
Sbjct: 242 EVRVFPDKGYSFVRFSSH 259
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 35/199 (17%)
Query: 59 TQPYGVAPDASSDGIRS---------LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNK 109
T P DA+S + S +++GDL P + I + F G +V+++
Sbjct: 82 TTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITTDDIKAAFAPFGRISDARVVKDM 141
Query: 110 QTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWAT---------YGAGERR 160
T S+GYGF+ F + AE + G + + R NWAT Y + ++
Sbjct: 142 TTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQ--IRTNWATRKPPAPKSTYESNTKQ 199
Query: 161 --------QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYG 212
Q + T++ G + + +T+ ++++TF + + + +V D KGY
Sbjct: 200 LTYEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTF-SPFGQIMEVRVFPD------KGYS 252
Query: 213 FVRFGDESEQLRSMTEMNG 231
FVRF ++ +NG
Sbjct: 253 FVRFSSHESAAHAIVSVNG 271
>gi|374671519|gb|AEZ56381.1| CBF-2 DNA-binding protein, partial [Dimocarpus longan]
Length = 84
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 69/84 (82%)
Query: 116 GYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLA 175
GYGF+EF S AAAE+VLQ+++G+ MP+TEQ FRLNWAT+ AG+RR + G D +IFVGDLA
Sbjct: 1 GYGFVEFCSRAAAEKVLQSYSGSVMPNTEQPFRLNWATFSAGDRRTEAGSDLSIFVGDLA 60
Query: 176 ADVTDYVLQETFRAVYSSVKGAKV 199
DVTD +LQ TF + + SVKGAKV
Sbjct: 61 PDVTDGMLQATFSSKFPSVKGAKV 84
>gi|28574707|ref|NP_608837.2| CG15440 [Drosophila melanogaster]
gi|19528537|gb|AAL90383.1| RE72132p [Drosophila melanogaster]
gi|28380262|gb|AAF51009.2| CG15440 [Drosophila melanogaster]
gi|220948848|gb|ACL86967.1| CG15440-PA [synthetic construct]
gi|220958268|gb|ACL91677.1| CG15440-PA [synthetic construct]
Length = 336
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 105/179 (58%), Gaps = 13/179 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+ +M E++I + F GE + +++RNK T GY F+ F+S A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 135 FNGTQMPSTE--QNFRLNWATYGA---GERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
NG +P T FRLN A+ G R+ F+++VGDL++DV DY L + F +
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE-----FSVWVGDLSSDVDDYQLYKVFSS 122
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
++S+K AKV+ D + G SKGYGFVRFG E EQ ++ +MNG + T+P++I A K
Sbjct: 123 KFTSIKTAKVILD-SLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPK 180
>gi|195471272|ref|XP_002087929.1| GE14719 [Drosophila yakuba]
gi|194174030|gb|EDW87641.1| GE14719 [Drosophila yakuba]
Length = 338
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 105/176 (59%), Gaps = 7/176 (3%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+ +M E++I + F GE + +++RNK T GY F+ F+S A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 135 FNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG +P T FRLN A+ + + +F+++VGDL++DV DY L + F + ++
Sbjct: 68 LNGKPIPGTNPIVRFRLNSAS--NSYKLPGNEREFSVWVGDLSSDVDDYQLYKVFSSKFT 125
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
S+K AKV+ D + G SKGYGFVRFG E EQ ++ +MNG + T+P++I A K
Sbjct: 126 SIKTAKVILD-SLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPK 180
>gi|403416100|emb|CCM02800.1| predicted protein [Fibroporia radiculosa]
Length = 433
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 133/261 (50%), Gaps = 25/261 (9%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERVL 132
L++G+L P + E + IF G K+I ++ N+ G YGF+E++ AAE L
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYMDMRAAETAL 75
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT NG ++ TE R+NWA Y + ++D + +FVGDL+ +V D VL + F A +
Sbjct: 76 QTLNGRKIFDTE--IRVNWA-YQGQQNKEDTSNHYHVFVGDLSPEVNDEVLGKAFSA-FG 131
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI---------GP 243
++ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +R +R+ GP
Sbjct: 132 TLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGGP 191
Query: 244 AATKKAATGQQYQKATYQNTQG------SQGENDPN-NTTIFVGGLDPSVTDDILKTVFG 296
+ T N QG S + P NTT++VG L P T L +F
Sbjct: 192 SPTMPGRPSGMGGAPAPINFQGGPLSYESVVQQTPAYNTTVYVGNLVPYCTQADLIPLFQ 251
Query: 297 QYGELVHVKIPAGKRCGFVQF 317
G L +++ A + FV+
Sbjct: 252 SIGYLSEIRMQADRGFAFVKL 272
>gi|195576533|ref|XP_002078130.1| GD22708 [Drosophila simulans]
gi|194190139|gb|EDX03715.1| GD22708 [Drosophila simulans]
Length = 336
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 105/179 (58%), Gaps = 13/179 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+ +M E++I + F GE + +++RNK T GY F+ F+S A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 135 FNGTQMPSTE--QNFRLNWATYGA---GERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
NG +P T FRLN A+ G R+ F+++VGDL++DV DY L + F +
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE-----FSVWVGDLSSDVDDYQLYKVFSS 122
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
++S+K AKV+ D + G SKGYGFVRFG E EQ ++ +MNG + T+P++I A K
Sbjct: 123 KFTSIKTAKVILD-SLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPK 180
>gi|195342467|ref|XP_002037822.1| GM18090 [Drosophila sechellia]
gi|194132672|gb|EDW54240.1| GM18090 [Drosophila sechellia]
Length = 336
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 105/179 (58%), Gaps = 13/179 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+ +M E++I + F GE + +++RNK T GY F+ F+S A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 135 FNGTQMPSTE--QNFRLNWATYGA---GERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
NG +P T FRLN A+ G R+ F+++VGDL++DV DY L + F +
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE-----FSVWVGDLSSDVDDYQLYKVFSS 122
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
++S+K AKV+ D + G SKGYGFVRFG E EQ ++ +MNG + T+P++I A K
Sbjct: 123 KFTSIKTAKVILD-SLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPK 180
>gi|194701250|gb|ACF84709.1| unknown [Zea mays]
Length = 424
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 134/284 (47%), Gaps = 32/284 (11%)
Query: 54 PPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF 113
P S P G P RS+++G++ P + ES + +F G K+IR ++++F
Sbjct: 32 PISNGNLPPGFDPST----CRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSF 87
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGD 173
GF+++ +A + T +G + Q ++NWA A +R+D F IFVGD
Sbjct: 88 ----GFVDYYDRRSAALAIMTLHGRHIYG--QAIKVNWAY--ASTQREDTSGHFHIFVGD 139
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
L+++V D L F A Y S A+V+ D TGRS+GYGFV F ++ E ++TEM G
Sbjct: 140 LSSEVNDATLYACFSA-YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKW 198
Query: 234 CSTRPMRIG----------PAATKKAATGQQYQKATYQNTQGSQG-------ENDPNNTT 276
+R +R P A +T T SQ EN+P+ TT
Sbjct: 199 LGSRQIRCNWATKTNSEEKPETDNHNAVVLTNGSSTNSATDASQDAGSKENPENNPDCTT 258
Query: 277 IFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFA 318
++VG L V D L F G + +++ K GFV+++
Sbjct: 259 VYVGNLGHEVNRDELHRHFYNLGVGAIEEIRVQQDKGFGFVRYS 302
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 79/199 (39%), Gaps = 40/199 (20%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL + ++ + + F +V+ + +T S GYGF+ F + AE +
Sbjct: 135 IFVGDLSSEVNDATLYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 194
Query: 136 NGTQMPSTEQNFRLNWATYGAGERR------------------------QDDG------- 164
G + S + R NWAT E + QD G
Sbjct: 195 TGKWLGSRQ--IRCNWATKTNSEEKPETDNHNAVVLTNGSSTNSATDASQDAGSKENPEN 252
Query: 165 -PDFT-IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
PD T ++VG+L +V L F + G + + + KG+GFVR+ E
Sbjct: 253 NPDCTTVYVGNLGHEVNRDELHRHFYNL-----GVGAIEEIRVQQDKGFGFVRYSTHGEA 307
Query: 223 LRSMTEMNGVLCSTRPMRI 241
++ NG++ + ++
Sbjct: 308 ALAIQMANGLVVRGKSIKC 326
>gi|226505614|ref|NP_001148740.1| LOC100282356 [Zea mays]
gi|195621754|gb|ACG32707.1| mRNA 3-UTR binding protein [Zea mays]
gi|224030425|gb|ACN34288.1| unknown [Zea mays]
gi|413921566|gb|AFW61498.1| mRNA 3-UTR binding protein [Zea mays]
Length = 449
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 134/284 (47%), Gaps = 32/284 (11%)
Query: 54 PPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF 113
P S P G P RS+++G++ P + ES + +F G K+IR ++++F
Sbjct: 57 PISNGNLPPGFDPST----CRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSF 112
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGD 173
GF+++ +A + T +G + Q ++NWA A +R+D F IFVGD
Sbjct: 113 ----GFVDYYDRRSAALAIMTLHGRHIYG--QAIKVNWAY--ASTQREDTSGHFHIFVGD 164
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
L+++V D L F A Y S A+V+ D TGRS+GYGFV F ++ E ++TEM G
Sbjct: 165 LSSEVNDATLYACFSA-YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKW 223
Query: 234 CSTRPMRIG----------PAATKKAATGQQYQKATYQNTQGSQG-------ENDPNNTT 276
+R +R P A +T T SQ EN+P+ TT
Sbjct: 224 LGSRQIRCNWATKTNSEEKPETDNHNAVVLTNGSSTNSATDASQDAGSKENPENNPDCTT 283
Query: 277 IFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFA 318
++VG L V D L F G + +++ K GFV+++
Sbjct: 284 VYVGNLGHEVNRDELHRHFYNLGVGAIEEIRVQQDKGFGFVRYS 327
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 79/199 (39%), Gaps = 40/199 (20%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL + ++ + + F +V+ + +T S GYGF+ F + AE +
Sbjct: 160 IFVGDLSSEVNDATLYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 219
Query: 136 NGTQMPSTEQNFRLNWATYGAGERR------------------------QDDG------- 164
G + S + R NWAT E + QD G
Sbjct: 220 TGKWLGSRQ--IRCNWATKTNSEEKPETDNHNAVVLTNGSSTNSATDASQDAGSKENPEN 277
Query: 165 -PDFT-IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
PD T ++VG+L +V L F + G + + + KG+GFVR+ E
Sbjct: 278 NPDCTTVYVGNLGHEVNRDELHRHFYNL-----GVGAIEEIRVQQDKGFGFVRYSTHGEA 332
Query: 223 LRSMTEMNGVLCSTRPMRI 241
++ NG++ + ++
Sbjct: 333 ALAIQMANGLVVRGKSIKC 351
>gi|390604168|gb|EIN13559.1| hypothetical protein PUNSTDRAFT_117298 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 425
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 131/266 (49%), Gaps = 30/266 (11%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERVL 132
L++G+L P + E + IF G K+I ++ N+ G YGF+E++ AAE L
Sbjct: 19 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYIDMRAAETAL 76
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT NG ++ TE R+NWA Y + ++D + +FVGDL+ +V D VLQ+ F A +
Sbjct: 77 QTLNGRKIFDTE--IRVNWA-YQGNQNKEDTSNHYHVFVGDLSPEVNDEVLQKAFSA-FG 132
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
S+ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +R +R+ A K
Sbjct: 133 SLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAM 192
Query: 253 QQYQKATY--------------QNTQGS-------QGENDPNNTTIFVGGLDPSVTDDIL 291
A N QG + N+T++VG L P T L
Sbjct: 193 GGGAPAPAAARPSPGLGGSPAPMNFQGGPISYESVVSQTPAYNSTVYVGNLVPYCTQADL 252
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQF 317
+F G L +++ A + FV+
Sbjct: 253 IPLFQSIGYLQEIRMQADRGFAFVKL 278
>gi|350291093|gb|EGZ72307.1| hypothetical protein NEUTE2DRAFT_144798 [Neurospora tetrasperma
FGSC 2509]
Length = 490
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 138/293 (47%), Gaps = 36/293 (12%)
Query: 55 PSQQTQPYG--VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTN 112
P+ P+G AP+ + R+L++G L P + E + IF TG + K+I +K
Sbjct: 73 PTSAGNPFGRRAAPEPNK---RALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNVG 129
Query: 113 --FSE-------GYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDD 163
SE YGF+E+ AAER +QT NG ++ +E R+NWA + ++D
Sbjct: 130 KPGSEQPRQKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSNNQNKEDT 187
Query: 164 GPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQL 223
F IFVGDL+ +V D VL + F A + SV A+V+ D TGRS+GYGFV F D +
Sbjct: 188 SGHFHIFVGDLSNEVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAE 246
Query: 224 RSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN-------------TQGSQ--- 267
++++ M+G +R +R A K + Q Q T G
Sbjct: 247 KALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQQMGLTPTTPYGHHHFPTHGVHSYD 306
Query: 268 ---GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
+ TT +VG L P T + L +F +G +V + A + F++
Sbjct: 307 MIVAQTPAWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVESRFQADRGFAFIKM 359
>gi|50311447|ref|XP_455748.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644884|emb|CAG98456.1| KLLA0F14861p [Kluyveromyces lactis]
Length = 589
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 103/180 (57%), Gaps = 13/180 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGE-FVSGKVIRNKQTNFSE-----GYGFIEFVSHAAAE 129
L++GDL P E+ I SI+ GE V K+I++ N S GY F+EF + AA
Sbjct: 58 LYMGDLNPDWTENDIKSIWSMLGEPNVQVKLIKSSNPNKSHAVNNSGYCFVEFPNQMAAS 117
Query: 130 RVLQTFNGTQMP-STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
L +G ++P + +LNWA++ G +FT+FVGDLA +VT+ L E F
Sbjct: 118 NALMK-SGLRVPMDSNYALKLNWASFATAP-----GSEFTLFVGDLAPNVTEAQLFELFI 171
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ YSS AK+V D+ TG SKGYGFV+F +E EQ R++ EM G + R +R+G + K
Sbjct: 172 SRYSSTLNAKIVFDQFTGVSKGYGFVKFVNEMEQQRALVEMQGTFLNGRAIRVGTTSKNK 231
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 40/50 (80%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DPNNTT+F+GGL +T+D L++ F +G++V+VKIP GK CGFVQ+ +R
Sbjct: 312 DPNNTTVFIGGLSTLITEDELRSYFQPFGQIVYVKIPVGKGCGFVQYVDR 361
>gi|308475439|ref|XP_003099938.1| hypothetical protein CRE_24556 [Caenorhabditis remanei]
gi|308266205|gb|EFP10158.1| hypothetical protein CRE_24556 [Caenorhabditis remanei]
Length = 408
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 145/284 (51%), Gaps = 27/284 (9%)
Query: 56 SQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSE 115
S+ + G + S+ R+L++G+L P + + ++A++F G K+I + ++
Sbjct: 20 SRYAEREGYHLASGSEDPRTLFVGNLDPAITDEFLATLFNQIGAVTKAKIIFDCFQGLND 79
Query: 116 GYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWAT--YGAGERRQ-DDGPDFTIFVG 172
+ F+EF H A + LQ+ NG Q+ E+ R+NWA G+R + + F +FVG
Sbjct: 80 PFAFVEFSDHNQASQALQSMNGRQL--LEREMRVNWAVEPNQPGDRNKPETSRHFHVFVG 137
Query: 173 DLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGV 232
DL+A++ L+E F + V AK++ D T ++KGYGFV + + R++ +MNG
Sbjct: 138 DLSAEIDSTKLREAF-LPFGEVSEAKIIRDNATNKAKGYGFVSYPRREDAERAIEQMNGQ 196
Query: 233 LCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQ-------------------GENDPN 273
R +R AT+K ++ +N +G + E +
Sbjct: 197 WLGRRTIRTN-WATRKPEEEGGERRERDRNERGDRPHRGEGRHHHFEKTYDEVFREAAAD 255
Query: 274 NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
NT+++VG ++ S+T+D ++ F ++G++V V+I + FV+F
Sbjct: 256 NTSVYVGNIN-SLTEDEIRRGFERFGQIVEVRIFKSQGYAFVKF 298
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 84/200 (42%), Gaps = 44/200 (22%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL ++ + + F GE K+IR+ TN ++GYGF+ + AER ++
Sbjct: 134 VFVGDLSAEIDSTKLREAFLPFGEVSEAKIIRDNATNKAKGYGFVSYPRREDAERAIEQM 193
Query: 136 NGTQMPSTEQNFRLNWAT---------------YGAGER-------------------RQ 161
NG + + R NWAT G+R R+
Sbjct: 194 NGQWL--GRRTIRTNWATRKPEEEGGERRERDRNERGDRPHRGEGRHHHFEKTYDEVFRE 251
Query: 162 DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
+ +++VG++ + D + + R + + ++ +S+GY FV+F +
Sbjct: 252 AAADNTSVYVGNINSLTEDEIRRGFER--FGQIVEVRIF------KSQGYAFVKFEQKES 303
Query: 222 QLRSMTEMNGVLCSTRPMRI 241
R++ +MN S + +R
Sbjct: 304 AARAIVQMNNQDVSGQMVRC 323
>gi|242082185|ref|XP_002445861.1| hypothetical protein SORBIDRAFT_07g027050 [Sorghum bicolor]
gi|241942211|gb|EES15356.1| hypothetical protein SORBIDRAFT_07g027050 [Sorghum bicolor]
Length = 447
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 133/284 (46%), Gaps = 32/284 (11%)
Query: 54 PPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF 113
P S P G P RS+++G++ P + ES + +F G K+IR ++++F
Sbjct: 55 PISNGNLPPGFDPST----CRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSF 110
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGD 173
GF+++ +A + T +G + Q ++NWA A +R+D F IFVGD
Sbjct: 111 ----GFVDYYDRRSAALAIMTLHGRHIYG--QAIKVNWAY--ASTQREDTSGHFHIFVGD 162
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
L+++V D L F A Y S A+V+ D TGRS+GYGFV F ++ E ++TEM G
Sbjct: 163 LSSEVNDATLYACFSA-YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKW 221
Query: 234 CSTRPMRIGPAATKKA--------------ATGQQYQKATYQNTQGSQGENDPNN---TT 276
+R +R A + G AT + G EN NN TT
Sbjct: 222 LGSRQIRCNWATKNNSEEKPETDNHNAVVLTNGSSSNSATDASQDGGSKENPENNPDCTT 281
Query: 277 IFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFA 318
++VG L V D L F G + +++ K GFV+++
Sbjct: 282 VYVGNLGHEVNRDELHRHFYSLGVGAIEEIRVQQDKGFGFVRYS 325
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 81/199 (40%), Gaps = 40/199 (20%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL + ++ + + F +V+ + +T S GYGF+ F + AE +
Sbjct: 158 IFVGDLSSEVNDATLYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 217
Query: 136 NGTQMPSTEQNFRLNWATYGAGERR------------------------QDDG------- 164
G + S + R NWAT E + QD G
Sbjct: 218 TGKWLGSRQ--IRCNWATKNNSEEKPETDNHNAVVLTNGSSSNSATDASQDGGSKENPEN 275
Query: 165 -PDFT-IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
PD T ++VG+L +V L F ++ G + + + KG+GFVR+ E
Sbjct: 276 NPDCTTVYVGNLGHEVNRDELHRHFYSL-----GVGAIEEIRVQQDKGFGFVRYSTHGEA 330
Query: 223 LRSMTEMNGVLCSTRPMRI 241
++ NG++ +P++
Sbjct: 331 ALAIQMGNGLVVRGKPIKC 349
>gi|409083337|gb|EKM83694.1| hypothetical protein AGABI1DRAFT_110331 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 444
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 140/278 (50%), Gaps = 27/278 (9%)
Query: 61 PYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---Y 117
P G+ A + L++G+L P + E + IF G K+I ++ N+ G Y
Sbjct: 3 PMGMGGPAEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNY 60
Query: 118 GFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAAD 177
GF+E++ +AE LQT NG ++ TE R+NWA Y + ++D + +FVGDL+ +
Sbjct: 61 GFVEYMDMRSAETALQTLNGRKIFDTE--IRVNWA-YQGQQNKEDTSGHYHVFVGDLSPE 117
Query: 178 VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTR 237
V D VL + F A + ++ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +R
Sbjct: 118 VNDDVLAKAFSA-FGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSR 176
Query: 238 PMRIGPA--ATKKAATGQQYQKATYQNTQGS------QG----------ENDPNNTTIFV 279
+R+ A T+ A Q +T G+ QG + NTT++V
Sbjct: 177 AIRVNWANQKTQGGAPAVQQSPRPAGSTGGAPAPINFQGGPLSYESVVQQTPAYNTTVYV 236
Query: 280 GGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
G L P T L +F G L +++ A + FV+
Sbjct: 237 GNLVPYCTQADLIPLFQSIGYLSEIRMQADRGFAFVKL 274
>gi|150866410|ref|XP_001386002.2| hypothetical protein PICST_62299 [Scheffersomyces stipitis CBS
6054]
gi|149387666|gb|ABN67973.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 446
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 137/266 (51%), Gaps = 24/266 (9%)
Query: 76 LWIGDLQP-WMEESYIASIFGHTG-EFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+W+G L P W EES IA+I+ G VS K++R+K Y F+ F + + +Q
Sbjct: 85 IWMGGLDPTWTEES-IANIWQTVGVPPVSVKIMRDKFNTTKPPYSFVTFANEKEVDTAVQ 143
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGP--------DFTIFVGDLAADVTDYVLQE 185
NG +P + + F++N+A G R D + +IF+GDLA DVT+ ++
Sbjct: 144 K-NGLVIPGSARTFKINYAG-GPNSRYPDSSNSRQIAPKNEHSIFIGDLALDVTEDLIFA 201
Query: 186 TFRAVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
F + VK K++ D+ TG +KG+GFVRF + + R++ EMNGV+ +R +R+G A
Sbjct: 202 KFNTQFPGQVKQVKIMFDQQTGANKGFGFVRFTNIEIKNRALKEMNGVVVGSRAIRVGQA 261
Query: 245 ATKK-------AATGQQYQKATYQNTQGSQGEN---DPNNTTIFVGGLDPSVTDDILKTV 294
+ A + ++ + +Q N DPNNTT+ + GL T+D L
Sbjct: 262 SGSNSGGFSSPAPESENHEISRVHLSQSQPALNQFTDPNNTTLSITGLSSKFTEDELALH 321
Query: 295 FGQYGELVHVKIPAGKRCGFVQFANR 320
F +G++V K+ + ++F +R
Sbjct: 322 FIAFGDIVACKLSDDLQSASIKFFSR 347
>gi|426201609|gb|EKV51532.1| hypothetical protein AGABI2DRAFT_189771 [Agaricus bisporus var.
bisporus H97]
Length = 469
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 140/279 (50%), Gaps = 27/279 (9%)
Query: 60 QPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG--- 116
P G+ A + L++G+L P + E + IF G K+I ++ N+ G
Sbjct: 2 NPMGMGGPAEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLN 59
Query: 117 YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
YGF+E++ +AE LQT NG ++ TE R+NWA Y + ++D + +FVGDL+
Sbjct: 60 YGFVEYMDMRSAETALQTLNGRKIFDTE--IRVNWA-YQGQQNKEDTSGHYHVFVGDLSP 116
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+V D VL + F A + ++ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +
Sbjct: 117 EVNDDVLAKAFSA-FGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGS 175
Query: 237 RPMRIGPA--ATKKAATGQQYQKATYQNTQGS------QG----------ENDPNNTTIF 278
R +R+ A T+ A Q +T G+ QG + NTT++
Sbjct: 176 RAIRVNWANQKTQGGAPAVQQSPRPAGSTGGAPAPINFQGGPLSYESVVQQTPAYNTTVY 235
Query: 279 VGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
VG L P T L +F G L +++ A + FV+
Sbjct: 236 VGNLVPYCTQADLIPLFQSIGYLSEIRMQADRGFAFVKL 274
>gi|402079107|gb|EJT74372.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 482
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 137/281 (48%), Gaps = 29/281 (10%)
Query: 59 TQPYG--VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG 116
T P+G AP+ + R+L++G L + E + IF TG + K+I +K
Sbjct: 73 TSPFGRRTAPEPNK---RALYVGGLDARVTEDVLRQIFETTGHVQNVKIIPDKNAK-GFN 128
Query: 117 YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPD-FTIFVGDLA 175
YGF+E+ AA+R +QT NG ++ +E R+NWA A ++D + F IFVGDL+
Sbjct: 129 YGFVEYDDPGAADRAMQTLNGRRVHQSE--IRVNWAYQSANTTTKEDTSNHFHIFVGDLS 186
Query: 176 ADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCS 235
+V D VL + F +V+ SV A+V+ D TGRS+GYGFV F D + ++++ M+G
Sbjct: 187 NEVNDEVLTQAF-SVFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLG 245
Query: 236 TRPMRIGPAATKKAATGQQYQKATYQN-------------TQGSQ------GENDPNNTT 276
+R +R A K + Q Q T G Q + TT
Sbjct: 246 SRAIRCNWANQKGQPSIAQQQAMQAMGMTPTTPYGHHHFPTHGMQSYEMVLNQTPAYQTT 305
Query: 277 IFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
+VG L P T + L +F +G +V + + + F++
Sbjct: 306 CYVGNLTPYTTANDLVPLFQNFGYVVESRFQSDRGFAFIKM 346
>gi|308198150|ref|XP_001387102.2| negative growth regulatory protein [Scheffersomyces stipitis CBS
6054]
gi|149389050|gb|EAZ63079.2| negative growth regulatory protein [Scheffersomyces stipitis CBS
6054]
Length = 690
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 117/217 (53%), Gaps = 28/217 (12%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHT-GEFVSGKVIRNKQTN--------FSEGYGFIEFVS 124
R+LW+GDL PW++E+ IA ++ + V+ K+I+ K + GY F+EF S
Sbjct: 102 RTLWMGDLDPWLDENGIADLWWKILQKRVTVKIIKPKTSKPDITYQGLSHSGYCFVEFES 161
Query: 125 HAAAERVL----QTFNGTQMPSTE----------QNFRLNWATYGAGERRQDDGPDFTIF 170
A+ L Q MPS + + FRLNWA+ P++++F
Sbjct: 162 FEDAQLALGLNGQLLPDIAMPSQQHFPNNPDNQKKYFRLNWASGATLSAPIIQSPEYSLF 221
Query: 171 VGDLAADVTDYVLQETFRAVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
VGDL+A T+ L F+ + +S+K +V+TD +G+S+ +GFVRF DESE+ R++ EM
Sbjct: 222 VGDLSASTTEAHLLAFFQKNFPASIKTVRVMTDPVSGKSRCFGFVRFTDESERQRALVEM 281
Query: 230 NGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGS 266
NGV RP+R+ AT + ++Q QN QG+
Sbjct: 282 NGVWFGGRPLRVA-LATPRNVNRNKFQN---QNHQGN 314
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DPNNTT+FVGGL VT+ L T+F +G + VKIP GK CGF++++ R
Sbjct: 398 DPNNTTVFVGGLSSEVTESTLFTLFKPFGIIQQVKIPPGKNCGFIKYSTR 447
>gi|400595086|gb|EJP62896.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 468
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 133/278 (47%), Gaps = 23/278 (8%)
Query: 59 TQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYG 118
T P G A R+L++G L + E + IF TG + K+I +K YG
Sbjct: 53 TSPGGFRRAAPEPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAK-GFNYG 111
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADV 178
F+E+ AA+R +QT NG ++ +E R+NWA ++D F IFVGDL+ +V
Sbjct: 112 FVEYDDPGAADRAMQTLNGRRVHQSE--IRVNWAYQANSSGKEDTSGHFHIFVGDLSNEV 169
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
D +L + F A + SV A+V+ D TGRS+GYGFV F D E ++++ M+G +R
Sbjct: 170 NDDILTQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRA 228
Query: 239 MRIGPAATKKAATGQQYQKAT------------YQNTQGSQGEND------PN-NTTIFV 279
+R A K + Q Q +Q G D PN TT++V
Sbjct: 229 IRCNWANQKGQPSMAQQQAMQAMGLTPTTPFGHHQFPTHGVGSYDVILAQTPNWQTTVYV 288
Query: 280 GGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
G L P T + + +F +G +V + A + F++
Sbjct: 289 GNLTPYTTPNDVVPLFQNFGFVVESRFQADRGFAFIKM 326
>gi|307211508|gb|EFN87603.1| tRNA selenocysteine-associated protein 1 [Harpegnathos saltator]
Length = 295
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 104/176 (59%), Gaps = 8/176 (4%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+P+M ES+I + F GE + KV+RN+ T GY F+ F + A +
Sbjct: 10 LWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMALDAMHK 69
Query: 135 FNGTQMPSTEQN--FRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG +P + + FRLN A+ G+ D +F+I+VGDL+ DV DY L F A Y+
Sbjct: 70 LNGKVIPGSNPSVRFRLNHAS-TTGKPAADR--EFSIWVGDLSTDVDDYSLYRAFAAKYN 126
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
S++ AKV+ D ++G SKGYGFVRF +E EQ S++ MNG T+ ++I A +
Sbjct: 127 SIRTAKVILD-SSGFSKGYGFVRFANEDEQKNSLSTMNGYRGLGTKSLKICNAVPR 181
>gi|147902038|ref|NP_001087561.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
laevis]
gi|51261513|gb|AAH80105.1| MGC84540 protein [Xenopus laevis]
Length = 389
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 131/258 (50%), Gaps = 16/258 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I + N + Y F+EF H A L
Sbjct: 7 RTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGN--DPYCFVEFFEHRHAAASLA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPD----------FTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ + F +FVGDL+ ++T +
Sbjct: 65 AINGRKIMGKE--VKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITTDDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TTG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQNT-QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ Q T + ++ P+N T++ GG+ +T+ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTYESNAKQLTYEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 303 HVKIPAGKRCGFVQFANR 320
V++ K FV+F++
Sbjct: 242 EVRVFPDKGYSFVRFSSH 259
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 35/199 (17%)
Query: 59 TQPYGVAPDASSDGIRS---------LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNK 109
T P DA+S + S +++GDL P + I + F G +V+++
Sbjct: 82 TTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITTDDIKAAFAPFGRISDARVVKDM 141
Query: 110 QTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWAT---------YGAGERR 160
T S+GYGF+ F + AE + G + + R NWAT Y + ++
Sbjct: 142 TTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGG--RQIRTNWATRKPPAPKSTYESNAKQ 199
Query: 161 --------QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYG 212
Q + T++ G + + +T+ ++++TF + + + +V D KGY
Sbjct: 200 LTYEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTF-SPFGQIMEVRVFPD------KGYS 252
Query: 213 FVRFGDESEQLRSMTEMNG 231
FVRF ++ +NG
Sbjct: 253 FVRFSSHESAAHAIVSVNG 271
>gi|356559021|ref|XP_003547800.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 416
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 143/286 (50%), Gaps = 31/286 (10%)
Query: 49 PQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRN 108
PQ P PS P G P RS+++G++ + E + +F TG + K+IR
Sbjct: 33 PQIEPIPSGNLPP-GFDPST----CRSVYVGNIHTQVTEPLLQEVFAGTGPVEACKLIRK 87
Query: 109 KQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT 168
+++ YGFI + +A + + NG + Q ++NWA Y +G+R G +
Sbjct: 88 DKSS----YGFIHYFDRRSAALAILSLNGRHL--FGQPIKVNWA-YASGQREDTSG-HYN 139
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE 228
IFVGDL+ +VTD L F +VY + A+V+ D+ TGRS+G+GFV F ++ + ++ +
Sbjct: 140 IFVGDLSPEVTDATLFACF-SVYPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 198
Query: 229 MNGVLCSTRPMRIGPAATKKAATGQQYQKA--------TYQNTQGSQG------ENDPNN 274
+ G +R +R ATK A ++ Q + TY ++ G + EN+P
Sbjct: 199 LTGKWLGSRQIRCN-WATKGAGGTEEKQNSDAKSVVELTYGSSDGKETSNSDAPENNPQY 257
Query: 275 TTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQFA 318
TT++VG L P T L F G V V++ K GFV+++
Sbjct: 258 TTVYVGNLAPEATQLDLHHHFHSLGAGVIEEVRVQRDKGFGFVRYS 303
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 38/196 (19%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
+ G ++++GDL P + ++ + + F +V+ +++T S G+GF+ F + A+
Sbjct: 134 TSGHYNIFVGDLSPEVTDATLFACFSVYPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ 193
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYGAG------------------------ERRQDDGP 165
+ G + S + R NWAT GAG E D P
Sbjct: 194 SAINDLTGKWLGSRQ--IRCNWATKGAGGTEEKQNSDAKSVVELTYGSSDGKETSNSDAP 251
Query: 166 D-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+ T++VG+LA + T L F ++ GA V+ + R KG+GFVR+ +
Sbjct: 252 ENNPQYTTVYVGNLAPEATQLDLHHHFHSL-----GAGVIEEVRVQRDKGFGFVRYSTHA 306
Query: 221 EQLRS--MTEMNGVLC 234
E + M +LC
Sbjct: 307 EAALAIQMGNAQSLLC 322
>gi|336469273|gb|EGO57435.1| hypothetical protein NEUTE1DRAFT_129383 [Neurospora tetrasperma
FGSC 2508]
Length = 494
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 138/297 (46%), Gaps = 40/297 (13%)
Query: 55 PSQQTQPYG--VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVI------ 106
P+ P+G AP+ + R+L++G L P + E + IF TG + K+I
Sbjct: 73 PTSAGNPFGRRAAPEPNK---RALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNVG 129
Query: 107 -------RNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGER 159
R+++ YGF+E+ AAER +QT NG ++ +E R+NWA +
Sbjct: 130 KPGSEQPRDEKQQKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSNNQN 187
Query: 160 RQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDE 219
++D F IFVGDL+ +V D VL + F A + SV A+V+ D TGRS+GYGFV F D
Sbjct: 188 KEDTSGHFHIFVGDLSNEVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFRDR 246
Query: 220 SEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN-------------TQGS 266
+ ++++ M+G +R +R A K + Q Q T G
Sbjct: 247 PDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQQMGLTPTTPYGHHHFPTHGV 306
Query: 267 Q------GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
+ TT +VG L P T + L +F +G +V + A + F++
Sbjct: 307 HSYDMIVAQTPAWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVESRFQADRGFAFIKM 363
>gi|156542291|ref|XP_001604737.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Nasonia
vitripennis]
Length = 294
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 104/179 (58%), Gaps = 14/179 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+P+M ES++ + F GE + KV+RN+ T GY F+ F + A +
Sbjct: 10 LWMGGLEPYMTESFVMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMALDAMHK 69
Query: 135 FNGTQMPST--EQNFRLNWATYG---AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
NG +P + + FRLN A+ A ER +++I+VGDL+ DV DY L TF A
Sbjct: 70 LNGKIIPGSNPQVRFRLNHASTTGKPAAER------EYSIWVGDLSTDVDDYSLYRTFAA 123
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
Y+S++ AKV+ D ++G SKGYGFVRF +E EQ S+ MNG TR ++I A +
Sbjct: 124 KYNSIRTAKVILD-SSGFSKGYGFVRFANEDEQKDSLVTMNGYRGLGTRSLKICNAVPR 181
>gi|380748929|ref|NP_001244132.1| nucleolysin TIAR isoform 2 [Gallus gallus]
gi|28883273|gb|AAO49720.1| TIA-1 [Gallus gallus]
Length = 372
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 129/245 (52%), Gaps = 7/245 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFYEHRHAASALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAF-APFGR 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS 180
Query: 254 QYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++ +++ K
Sbjct: 181 TYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGY 240
Query: 313 GFVQF 317
FV+F
Sbjct: 241 SFVRF 245
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 136 NGTQMPSTEQNFRLNWAT---------YGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWAT Y + ++ Q + T++ G + + +
Sbjct: 157 GGQWLGGRQ--IRTNWATRKPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGL 214
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 215 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNG 260
>gi|358059025|dbj|GAA95206.1| hypothetical protein E5Q_01862 [Mixia osmundae IAM 14324]
Length = 352
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 128/259 (49%), Gaps = 23/259 (8%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERVL 132
L+IG++ P + E + +F G K+I ++ F G YGF+EF + AE+ L
Sbjct: 14 LYIGNISPRVTEYMLQEVFALAGPVQQVKIIPDR--TFQHGGLNYGFVEFYTMQGAEQAL 71
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT G ++ TE ++NWA Y ++D F +F GDL+ +VTD +LQ+TF A +
Sbjct: 72 QTLAGRKLFDTE--MKVNWA-YQNQTAKEDVTNHFHVFCGDLSPEVTDDILQKTFSA-FG 127
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
S+ A+V+ D +G+S+GYGF+ F D ++ ++ MNG +R +R+ A K
Sbjct: 128 SLSDARVMWDMASGKSRGYGFLAFRDRADAEAAINAMNGEWLGSRAIRVNWANQKNQGMM 187
Query: 253 QQYQKATYQNTQGSQ-----GENDPN---------NTTIFVGGLDPSVTDDILKTVFGQY 298
G +D N NTT++VG L P T L +F Y
Sbjct: 188 GDGGMGEGPPPPARSGGFQVGGSDYNMVVTQTPVSNTTVYVGNLVPYCTQADLIPLFQGY 247
Query: 299 GELVHVKIPAGKRCGFVQF 317
G +V +++ A + FV+
Sbjct: 248 GYIVEIRMQADRGFAFVKL 266
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 72/196 (36%), Gaps = 39/196 (19%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
++ GDL P + + + F G +V+ + + S GYGF+ F A AE +
Sbjct: 105 VFCGDLSPEVTDDILQKTFSAFGSLSDARVMWDMASGKSRGYGFLAFRDRADAEAAINAM 164
Query: 136 NGTQMPSTEQNFRLNWAT------------------YGAGERRQDDGPDF---------- 167
NG + S + R+NWA Q G D+
Sbjct: 165 NGEWLGS--RAIRVNWANQKNQGMMGDGGMGEGPPPPARSGGFQVGGSDYNMVVTQTPVS 222
Query: 168 --TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
T++VG+L T L F+ Y + ++ DR G+ FV+ +
Sbjct: 223 NTTVYVGNLVPYCTQADLIPLFQG-YGYIVEIRMQADR------GFAFVKLDTHEHAAMA 275
Query: 226 MTEMNGVLCSTRPMRI 241
+ + G +C R ++
Sbjct: 276 IAYLTGQMCQGRSLKC 291
>gi|367026720|ref|XP_003662644.1| hypothetical protein MYCTH_2303522 [Myceliophthora thermophila ATCC
42464]
gi|347009913|gb|AEO57399.1| hypothetical protein MYCTH_2303522 [Myceliophthora thermophila ATCC
42464]
Length = 500
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 127/263 (48%), Gaps = 23/263 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G L P + E + IF TG S K+I +K YGF+E+ AAER +Q
Sbjct: 90 RALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKNAK-GYNYGFVEYDDPGAAERAMQ 148
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A + S
Sbjct: 149 TLNGRRVHQSE--IRVNWAYQSNNSNKEDTSNHFHIFVGDLSNEVNDEVLFQAFSA-FGS 205
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+V+ D TGRS+GYGFV F + ++ ++++ M+G +R +R A K +
Sbjct: 206 ISEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 265
Query: 254 QYQKATYQN-------------TQGSQGENDPNN------TTIFVGGLDPSVTDDILKTV 294
Q Q T G + N TT +VG L P T + +
Sbjct: 266 QQQAMQQMGMTPTTPYGHHHFPTHGVHSYDMVVNQTPAWQTTCYVGNLTPYTTQTDIVPL 325
Query: 295 FGQYGELVHVKIPAGKRCGFVQF 317
F +G +V + A + F++
Sbjct: 326 FQNFGFVVESRFQADRGFAFIKM 348
>gi|383852956|ref|XP_003701991.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Megachile rotundata]
Length = 295
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 102/179 (56%), Gaps = 14/179 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+P+M ES+I + F GE + KV+RN+ T GY F+ F + A +
Sbjct: 10 LWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMALDAMHK 69
Query: 135 FNGTQMPSTE--QNFRLNWATYG---AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
NG +P + FRLN A+ A ER +F+I+VGDL+ DV DY L F A
Sbjct: 70 LNGKVIPGSNPAVRFRLNHASTTGKPAAER------EFSIWVGDLSTDVDDYSLYRAFAA 123
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
Y+S++ AKV+ D ++G SKGYGFVRF +E EQ S+ MNG T+ ++I A +
Sbjct: 124 KYNSIRTAKVILD-SSGFSKGYGFVRFANEEEQKNSLVTMNGYRGLGTKSLKICNAVPR 181
>gi|320585953|gb|EFW98632.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Grosmannia clavigera kw1407]
Length = 488
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 149/338 (44%), Gaps = 46/338 (13%)
Query: 18 QQHQQWMAYQQQSQQQQQQHQTPVPPPVGWTPQPVPP-PSQQTQP--------------- 61
QQ+ + Q+ Q H +PPP PQ P P+ T P
Sbjct: 16 QQNTGGQGFDNQNGQSNSAH---MPPPPLHIPQNTNPIPTAITSPLGGGDQSGLMSPTSA 72
Query: 62 --YGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGF 119
YG A R+L++G L + E + IF TG + K+I +K YGF
Sbjct: 73 AAYGGRRSAPEPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAK-GYNYGF 131
Query: 120 IEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVT 179
+E+ AAER +Q NG ++ +E R+NWA ++D F IFVGDL+ +V
Sbjct: 132 VEYDDPGAAERAMQNLNGRRVHQSE--IRVNWAYQSNTTSKEDTSGHFHIFVGDLSNEVN 189
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
D VL + F + + SV A+V+ D TGRS+GYGFV F D + ++++ M+G +R +
Sbjct: 190 DEVLTQAFTS-FGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAI 248
Query: 240 RIGPAATKKAATGQQYQKATYQ--------------NTQGSQGENDPNN------TTIFV 279
R A +K Q+A Q TQG N TT +V
Sbjct: 249 RCN-WANQKGQPSMAQQQALQQVGMTPTTPFGHHHFPTQGINSYEMVINQTPAWQTTCYV 307
Query: 280 GGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
G L P T + L +F +G +V + + + F++
Sbjct: 308 GNLTPYTTQNDLVPLFQNFGYVVESRFQSDRGFAFIKL 345
>gi|357156104|ref|XP_003577343.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 451
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 142/290 (48%), Gaps = 30/290 (10%)
Query: 49 PQPVPPPSQQTQPY---GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKV 105
P P + Q +P + P S RS+++G++ + +S + +F G K+
Sbjct: 49 PHPGLLAAPQIEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKL 108
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
IR ++++F GF+++ +A + + NG Q+ Q ++NWA A +R+D
Sbjct: 109 IRKEKSSF----GFVDYYDRRSAALAIVSLNGRQL--FGQPIKVNWAY--ASTQREDTSG 160
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
F IFVGDL +VTD L F A YS+ A+V+ D+ TGRS+G+GFV F ++ + +
Sbjct: 161 HFNIFVGDLCPEVTDAALFAFFSA-YSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTA 219
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQ---------------KATYQNTQGSQGEN 270
+ E+NG R +R ATK A G++ Q +A +N EN
Sbjct: 220 INELNGKWLGNRQIRCN-WATKGANAGEEKQNTDSKGMVELINGSSEAGKENANEDGPEN 278
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFA 318
+P TT++VG L + + + F G + V++ K GFV+++
Sbjct: 279 NPQYTTVYVGNLPHDINSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYS 328
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 37/202 (18%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
+ G ++++GDL P + ++ + + F +V+ +++T S G+GF+ F + A+
Sbjct: 158 TSGHFNIFVGDLCPEVTDAALFAFFSAYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ 217
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYGA--GERRQD-----------------------DG 164
+ NG + + R NWAT GA GE +Q+ DG
Sbjct: 218 TAINELNGKWL--GNRQIRCNWATKGANAGEEKQNTDSKGMVELINGSSEAGKENANEDG 275
Query: 165 PD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDE 219
P+ T++VG+L D+ + F + GA + + R KG+GFVR+
Sbjct: 276 PENNPQYTTVYVGNLPHDINSNDVHRFFHLL-----GAGSIEEVRVTRDKGFGFVRYSTH 330
Query: 220 SEQLRSMTEMNGVLCSTRPMRI 241
E ++ NG L R ++
Sbjct: 331 EEAALAIQTGNGQLVGGRQIKC 352
>gi|342870153|gb|EGU73450.1| hypothetical protein FOXB_16088 [Fusarium oxysporum Fo5176]
Length = 474
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 126/263 (47%), Gaps = 23/263 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L+IG L + E + IF TG + K+I +K YGF+E+ AAER +Q
Sbjct: 84 RALYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPDKNAR-GYNYGFVEYDDPGAAERAMQ 142
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A + S
Sbjct: 143 TLNGRRVHQSE--IRVNWAYQSNTTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 199
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG- 252
V A+V+ D TGRS+GYGFV F D E ++++ M+G +R +R A K +
Sbjct: 200 VSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWANQKGQPSMA 259
Query: 253 ------------------QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTV 294
Q+ + + + TT++VG L P T + + +
Sbjct: 260 QQQAMQAMGMTPTTPYGHHQFPAHGVASYEVILTQTPSWQTTVYVGNLTPYTTPNDVVPL 319
Query: 295 FGQYGELVHVKIPAGKRCGFVQF 317
F +G +V + A + F++
Sbjct: 320 FQNFGFVVESRFQADRGFAFIKM 342
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 74/175 (42%), Gaps = 25/175 (14%)
Query: 153 TYGAGERRQDDGPD-FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGY 211
T G RR P+ +++G L VT+ VL++ F V+ K++ D+ R Y
Sbjct: 69 TSAGGFRRAAPEPNKRALYIGGLDQRVTEEVLRQIFETT-GHVQNVKIIPDKNA-RGYNY 126
Query: 212 GFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEND 271
GFV + D R+M +NG +R+ A YQ T + E+
Sbjct: 127 GFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWA----------YQSNT------TNKEDT 170
Query: 272 PNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI------PAGKRCGFVQFANR 320
N+ IFVG L V D++L F +G + ++ + GFV F +R
Sbjct: 171 SNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDR 225
>gi|321474916|gb|EFX85880.1| hypothetical protein DAPPUDRAFT_20224 [Daphnia pulex]
Length = 346
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 120/245 (48%), Gaps = 10/245 (4%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFN 136
++G+L P + E I +FG G K+I E Y F+EF H +A L N
Sbjct: 1 YVGNLDPSVTEELIMVLFGQIGTVKGCKIIHEPG---HEPYCFVEFAEHHSAAAALAAMN 57
Query: 137 GTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKG 196
E ++NWAT +QD F IFVGDL+ ++ + L++ F A + +
Sbjct: 58 KRNCMGRE--MKVNWATSPGNAPKQDTSKHFHIFVGDLSPEIETHTLRDAF-AAFGEISD 114
Query: 197 AKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ 256
+VV D T +SKGYGFV F +S+ ++ MNG TR +R A K A
Sbjct: 115 CRVVRDPQTLKSKGYGFVSFVKKSDAENAIAGMNGQWLGTRAIRTNWATRKPPAPKDAGS 174
Query: 257 K-ATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFV 315
K +Y+ G ++ N T++ G L T++ L+ +FG YG++ +++ K F+
Sbjct: 175 KPMSYEEVFG---QSSSTNCTVYCGNLAQGSTEEALQKIFGPYGQIQEIRVFKDKGYAFI 231
Query: 316 QFANR 320
+FA++
Sbjct: 232 RFASK 236
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 96/213 (45%), Gaps = 32/213 (15%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G AP + +++GDL P +E + F GE +V+R+ QT S+GYGF+ F
Sbjct: 75 GNAPKQDTSKHFHIFVGDLSPEIETHTLRDAFAAFGEISDCRVVRDPQTLKSKGYGFVSF 134
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATY------GAGER--------RQDDGPDFT 168
V + AE + NG + + + R NWAT AG + Q + T
Sbjct: 135 VKKSDAENAIAGMNGQWLGT--RAIRTNWATRKPPAPKDAGSKPMSYEEVFGQSSSTNCT 192
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM-- 226
++ G+LA T+ LQ+ F Y ++ +V D KGY F+RF + +++
Sbjct: 193 VYCGNLAQGSTEEALQKIF-GPYGQIQEIRVFKD------KGYAFIRFASKESATQAIVS 245
Query: 227 ---TEMNG--VLCS--TRPMRIGPAATKKAATG 252
T++NG V CS P G A + TG
Sbjct: 246 VHNTDLNGQNVKCSWGKEPGEPGSANNAQLMTG 278
>gi|332030538|gb|EGI70226.1| tRNA selenocysteine 1-associated protein 1 [Acromyrmex echinatior]
Length = 295
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 102/179 (56%), Gaps = 14/179 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+P+M ES+I + F GE + KV+RN+ T GY F+ F + A +
Sbjct: 10 LWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMALDAMHK 69
Query: 135 FNGTQMPSTE--QNFRLNWATYG---AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
NG +P + FRLN A+ A ER +F+I+VGDL+ DV DY L F A
Sbjct: 70 LNGKVIPGSNPPVRFRLNHASTTGKPAAER------EFSIWVGDLSTDVDDYSLYRAFAA 123
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
Y+S++ AKV+ D ++G SKGYGFVRF +E EQ S+ MNG T+ ++I A +
Sbjct: 124 KYNSIRTAKVILD-SSGFSKGYGFVRFANEEEQKNSLITMNGYRGLGTKSLKICNAVPR 181
>gi|169614620|ref|XP_001800726.1| hypothetical protein SNOG_10456 [Phaeosphaeria nodorum SN15]
gi|160702784|gb|EAT81850.2| hypothetical protein SNOG_10456 [Phaeosphaeria nodorum SN15]
Length = 506
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 130/269 (48%), Gaps = 28/269 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF----SEG--YGFIEFVSHAA 127
R+L++G L P + E + IF TG S K+I +K + S+G YGF+E+ A
Sbjct: 86 RALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTVSSPSVNSKGFNYGFVEYDDPGA 145
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
AER + T NG ++ + E R+NWA ++D F IFVGDL+ +V D VL + F
Sbjct: 146 AERGMATLNGRRIHNNE--IRVNWAYQSNNTAKEDTSNHFHIFVGDLSNEVNDEVLLQAF 203
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
+ + V A+V+ D TGRS+GYGFV F D ++ R+++ M+G +R +R A K
Sbjct: 204 -STFGPVSEARVMWDMKTGRSRGYGFVAFRDRADAERALSSMDGEWLGSRAIRCNWANQK 262
Query: 248 KAATGQQYQKATYQN-------------TQGSQGEN-----DPN-NTTIFVGGLDPSVTD 288
+ Q Q TQG Q + P TT +VG L P +
Sbjct: 263 GQPSISQQQAMASMGMTPTTPFGHHHFPTQGVQSYDMVVAQTPQWQTTCYVGNLTPYTSQ 322
Query: 289 DILKTVFGQYGELVHVKIPAGKRCGFVQF 317
L +F +G + + + + F++
Sbjct: 323 SDLVPLFQNFGYVTETRFQSDRGFAFIKM 351
>gi|429863469|gb|ELA37920.1| nuclear and cytoplasmic polyadenylated rna-binding protein pub1
[Colletotrichum gloeosporioides Nara gc5]
Length = 479
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 127/266 (47%), Gaps = 29/266 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G L + E + IF TG + K+I +K YGF+E+ AAER +Q
Sbjct: 86 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAK-GYNYGFVEYDDPGAAERAMQ 144
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A + S
Sbjct: 145 TLNGRRVHQSE--IRVNWAYQSNTSSKEDTSNHFHIFVGDLSNEVNDEVLTQAFSA-FGS 201
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V A+V+ D TGRS+GYGFV F D + ++++ M+G +R +R A K +
Sbjct: 202 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 261
Query: 254 QYQK----------------------ATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDIL 291
Q Q A+Y+ + TT +VG L P T + +
Sbjct: 262 QQQAMQAMGLTPTTPFGHHQFPAHGVASYEVV---LAQTPSWQTTCYVGNLTPYTTPNDV 318
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQF 317
+F +G +V + A + F++
Sbjct: 319 VPLFQNFGYVVESRFQADRGFAFIKM 344
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 24/172 (13%)
Query: 155 GAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFV 214
G G R + ++VG L VT+ VL++ F V+ K++ D+ + YGFV
Sbjct: 74 GFGRRAAPEPNKRALYVGGLDQRVTEDVLRQIFETT-GHVQNVKIIPDKNA-KGYNYGFV 131
Query: 215 RFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNN 274
+ D R+M +NG +R+ A YQ T S E+ N+
Sbjct: 132 EYDDPGAAERAMQTLNGRRVHQSEIRVNWA----------YQSNT------SSKEDTSNH 175
Query: 275 TTIFVGGLDPSVTDDILKTVFGQYGELVHVKI------PAGKRCGFVQFANR 320
IFVG L V D++L F +G + ++ + GFV F +R
Sbjct: 176 FHIFVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDR 227
>gi|336389833|gb|EGO30976.1| hypothetical protein SERLADRAFT_455426 [Serpula lacrymans var.
lacrymans S7.9]
Length = 439
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 135/261 (51%), Gaps = 25/261 (9%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERVL 132
L++G+L P + E + IF G K+I ++ N+ G YGF+E++ AAE L
Sbjct: 19 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYMDMRAAETAL 76
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT NG ++ TE R+NWA Y + ++D + +FVGDL+ +V D +L + F A +
Sbjct: 77 QTLNGRKIFDTE--IRVNWA-YQGQQNKEDTTGHYHVFVGDLSPEVNDEILGKAFSA-FG 132
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK---- 248
++ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +R +R+ A K
Sbjct: 133 TMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGSV 192
Query: 249 --------AATGQQYQKATYQN---TQGSQGENDPN-NTTIFVGGLDPSVTDDILKTVFG 296
ATG +Q + S + P+ N+T++VG L P T L +F
Sbjct: 193 AVASPPRPGATGGAPAPINFQGGPLSYDSVVQQTPSYNSTVYVGNLVPYCTQADLIPLFQ 252
Query: 297 QYGELVHVKIPAGKRCGFVQF 317
G L +++ A + FV+
Sbjct: 253 SIGYLSEIRMQADRGFAFVKL 273
>gi|307178104|gb|EFN66931.1| Nucleolysin TIAR [Camponotus floridanus]
Length = 393
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 119/250 (47%), Gaps = 9/250 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E + ++F G K+IR ++ Y F+EF +H +A L
Sbjct: 8 RTLYVGNLDASVSEDLLCALFSQIGAVKGCKIIREPG---NDPYAFVEFTNHQSAATALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N ++ ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRSF--LDKEMKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG---PAATKKAA 250
+ ++V D T +SKGY FV F +SE ++ MNG +R +R +
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNWSTRKPPPPRS 181
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
++ + N + ++ P N T++ GG +TD+++K F +G + +++ K
Sbjct: 182 ERPRHSNNSKPNYEEVYNQSSPTNCTVYCGGFTNGITDELIKKTFSPFGTIQDIRVFKDK 241
Query: 311 RCGFVQFANR 320
F++F +
Sbjct: 242 GYAFIKFTTK 251
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 40/218 (18%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + F GE + +++R+ QT S+GY F+ F
Sbjct: 85 GNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 144
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT-------YGAGERRQDDGPDF-------- 167
V + AE + NG + S ++ R NW+T + P++
Sbjct: 145 VKKSEAEAAINAMNGQWLGS--RSIRTNWSTRKPPPPRSERPRHSNNSKPNYEEVYNQSS 202
Query: 168 ----TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQL 223
T++ G +TD ++++TF + + +++ +V D KGY F++F +
Sbjct: 203 PTNCTVYCGGFTNGITDELIKKTF-SPFGTIQDIRVFKD------KGYAFIKFTTKEAAT 255
Query: 224 RSM-----TEMNG--VLC-----STRPMRIGPAATKKA 249
++ TE+NG V C + P +GP A +A
Sbjct: 256 HAIESTHNTEINGSIVKCFWGKENGDPNSVGPNANHQA 293
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKRCGFVQFANR 320
+ N T++VG LD SV++D+L +F Q G + KI P FV+F N
Sbjct: 4 ESNPRTLYVGNLDASVSEDLLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNH 56
>gi|307181029|gb|EFN68803.1| tRNA selenocysteine-associated protein 1 [Camponotus floridanus]
Length = 304
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 102/179 (56%), Gaps = 14/179 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+P+M ES+I + F GE + KV+RN+ T GY F+ F + A +
Sbjct: 10 LWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMALDAMHK 69
Query: 135 FNGTQMPSTE--QNFRLNWATYG---AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
NG +P + FRLN A+ A ER +F+I+VGDL+ DV DY L F A
Sbjct: 70 LNGKVIPGSNPPVRFRLNHASTTGKPAAER------EFSIWVGDLSTDVDDYSLYRAFAA 123
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
Y+S++ AKV+ D ++G SKGYGFVRF +E EQ S+ MNG T+ ++I A +
Sbjct: 124 KYNSIRTAKVILD-SSGFSKGYGFVRFANEEEQKNSLITMNGYRGLGTKSLKICNAVPR 181
>gi|336271351|ref|XP_003350434.1| hypothetical protein SMAC_02147 [Sordaria macrospora k-hell]
gi|380090956|emb|CCC11489.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 495
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 137/298 (45%), Gaps = 41/298 (13%)
Query: 55 PSQQTQPYG--VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNK--- 109
P+ P+G AP+ + R+L++G L P + E + IF TG + K+I +K
Sbjct: 73 PTSAGNPFGRRAAPEPNK---RALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNVG 129
Query: 110 -----------QTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGE 158
Q YGF+E+ AAER +QT NG ++ +E R+NWA +
Sbjct: 130 KPGSPEQPHDAQQQKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSNNQ 187
Query: 159 RRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGD 218
++D F IFVGDL+ +V D VL + F A + SV A+V+ D TGRS+GYGFV F D
Sbjct: 188 NKEDTSGHFHIFVGDLSNEVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFRD 246
Query: 219 ESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN-------------TQG 265
+ ++++ M+G +R +R A K + Q Q T G
Sbjct: 247 RPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQQMGLTPTTPYGHHHFPTHG 306
Query: 266 SQ------GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
+ TT +VG L P T + L +F +G +V + A + F++
Sbjct: 307 VHSYDMIVAQTPAWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVESRFQADRGFAFIKM 364
>gi|46122079|ref|XP_385593.1| hypothetical protein FG05417.1 [Gibberella zeae PH-1]
Length = 473
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 126/263 (47%), Gaps = 23/263 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L+IG L + E + IF TG + K+I +K YGF+E+ AAER +Q
Sbjct: 82 RALYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPDKNAR-GYNYGFVEYDDPGAAERAMQ 140
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A + S
Sbjct: 141 TLNGRRVHQSE--IRVNWAYQSNTTNKEDTSNHFHIFVGDLSNEVNDEVLTQAFSA-FGS 197
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG- 252
V A+V+ D TGRS+GYGFV F D E ++++ M+G +R +R A K +
Sbjct: 198 VSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWANQKGQPSMA 257
Query: 253 ------------------QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTV 294
Q+ + + + TT++VG L P T + + +
Sbjct: 258 QQQAMQAMGMTPTTPYGHHQFPAHGVASYEVILTQTPSWQTTVYVGNLTPYTTPNDVVPL 317
Query: 295 FGQYGELVHVKIPAGKRCGFVQF 317
F +G +V + A + F++
Sbjct: 318 FQNFGFVVESRFQADRGFAFIKM 340
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 78/187 (41%), Gaps = 25/187 (13%)
Query: 141 PSTEQNFRLNWATYGAGERRQDDGPD-FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKV 199
P + N + T G RR P+ +++G L VT+ VL++ F V+ K+
Sbjct: 55 PRSADNGGIMSPTSAGGFRRAAPEPNKRALYIGGLDQRVTEEVLRQIFETT-GHVQNVKI 113
Query: 200 VTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKAT 259
+ D+ R YGFV + D R+M +NG +R+ A YQ T
Sbjct: 114 IPDKNA-RGYNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWA----------YQSNT 162
Query: 260 YQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI------PAGKRCG 313
+ E+ N+ IFVG L V D++L F +G + ++ + G
Sbjct: 163 ------TNKEDTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRSRGYG 216
Query: 314 FVQFANR 320
FV F +R
Sbjct: 217 FVAFRDR 223
>gi|255732850|ref|XP_002551348.1| predicted protein [Candida tropicalis MYA-3404]
gi|240131089|gb|EER30650.1| predicted protein [Candida tropicalis MYA-3404]
Length = 810
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 119/210 (56%), Gaps = 28/210 (13%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIR--NKQTN------FSEGYGFIE 121
D R+LW+GDL PW++E+ I ++ + V+ K+I+ N +T+ + GY F+E
Sbjct: 106 DKPRTLWMGDLDPWLDENAIQDLWWSILQKKVTIKIIKPKNPKTDPTFHGLTNSGYCFVE 165
Query: 122 FVSHAAAERVLQTFNGTQMPST---------------EQNFRLNWATYGAGERRQDDGPD 166
F S A++ L + NG +P ++ FRLNWA+ P+
Sbjct: 166 FESFEDAQQAL-SLNGQLLPDIAMPSQQHFPNNPDNQKKYFRLNWASGATLSAPIVQTPE 224
Query: 167 FTIFVGDLAADVTDYVLQETFRAVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
F++FVGDL+A T+ L F+ + +S+K +V+TD +G+S+ +GFVRF +ESE+ R+
Sbjct: 225 FSLFVGDLSASTTEAHLLAFFQKTFPNSIKTVRVMTDPISGKSRCFGFVRFTEESERQRA 284
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQY 255
+ EMNGV + RP+R+ A + TG++Y
Sbjct: 285 LVEMNGVWFAGRPLRVALATPR--ITGRRY 312
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 35/50 (70%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DPNNTT+FVGGL V + L T+F +G + VKIP GK CGFV+++ R
Sbjct: 445 DPNNTTVFVGGLSSEVNEPTLYTLFKPFGMIQQVKIPPGKNCGFVKYSTR 494
>gi|281351637|gb|EFB27221.1| hypothetical protein PANDA_001198 [Ailuropoda melanoleuca]
Length = 245
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 88/137 (64%), Gaps = 7/137 (5%)
Query: 116 GYGFIEFVSHAAAERVLQTFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGD 173
GY F+EF A AE+ L NG +P + + F+LN+ATYG ++ D+ P++++FVGD
Sbjct: 4 GYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGD 60
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
L DV D +L E F VY S +G KVV D+ TG SKGYGFV+F DE EQ R+++E G +
Sbjct: 61 LTPDVDDGMLYEFFVKVYPSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALSECQGAV 119
Query: 234 -CSTRPMRIGPAATKKA 249
++P+R+ A K +
Sbjct: 120 GLGSKPVRLSVAIPKAS 136
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 62 YGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIE 121
YG PD S + SL++GDL P +++ + F G + QT S+GYGF++
Sbjct: 44 YGKQPDNSPE--YSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVK 101
Query: 122 FVSHAAAERVLQTFNGT 138
F +R L G
Sbjct: 102 FTDELEQKRALSECQGA 118
>gi|223948725|gb|ACN28446.1| unknown [Zea mays]
gi|414869520|tpg|DAA48077.1| TPA: mRNA 3-UTR binding protein [Zea mays]
Length = 446
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 133/284 (46%), Gaps = 32/284 (11%)
Query: 54 PPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF 113
P S P G P RS+++G++ P + ES + +F G K+IR ++++F
Sbjct: 55 PVSNGNLPPGFDPST----CRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSF 110
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGD 173
GF+++ +A + T +G + Q ++NWA A +R+D F IFVGD
Sbjct: 111 ----GFVDYYDRRSAALAIMTLHGRHVYG--QAIKVNWAY--ASTQREDTSGHFHIFVGD 162
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
L+++V D L F A Y S A+V+ D TGRS+GYGFV F ++ E ++TEM G
Sbjct: 163 LSSEVNDATLYACFSA-YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKW 221
Query: 234 CSTRPMRIGPAATKKA--------------ATGQQYQKATYQNTQGSQGE---NDPNNTT 276
+R +R A + G AT + E N+P+ TT
Sbjct: 222 LGSRQIRCNWATKNNSEEKPETDNHNAVVLTNGSSNNSATDASQDAGSKEPPQNNPDCTT 281
Query: 277 IFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFA 318
++VG L V D L F G + V++ K GFV+++
Sbjct: 282 VYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQDKGFGFVRYS 325
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 79/199 (39%), Gaps = 40/199 (20%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL + ++ + + F +V+ + +T S GYGF+ F + AE +
Sbjct: 158 IFVGDLSSEVNDATLYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 217
Query: 136 NGTQMPSTEQNFRLNWATYGAGERR------------------------QDDG------- 164
G + S + R NWAT E + QD G
Sbjct: 218 TGKWLGSRQ--IRCNWATKNNSEEKPETDNHNAVVLTNGSSNNSATDASQDAGSKEPPQN 275
Query: 165 -PDFT-IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
PD T ++VG+L +V L F + G + + + KG+GFVR+ E
Sbjct: 276 NPDCTTVYVGNLGHEVNRDELHRHFYNL-----GVGAIEEVRVQQDKGFGFVRYSTHGEA 330
Query: 223 LRSMTEMNGVLCSTRPMRI 241
++ NG + +P++
Sbjct: 331 ALAIQMSNGSVVRGKPIKC 349
>gi|336386826|gb|EGO27972.1| hypothetical protein SERLADRAFT_414166 [Serpula lacrymans var.
lacrymans S7.9]
Length = 933
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 115/226 (50%), Gaps = 46/226 (20%)
Query: 67 DASSDGIRS-LWIGDLQPWMEESYIASIFGHTG-EFVSGKV-------IRNKQTNFSEGY 117
+ +S+ +RS LW GDL+PWM+E Y + G G + V+ KV +Q N + GY
Sbjct: 167 NTNSNALRSTLWWGDLEPWMDEEYAKQVCGLMGWDPVNIKVPSPGPDPASGQQAN-NPGY 225
Query: 118 GFIEFVSHAAAERVLQTF--NGT----QMPSTEQNFRLNWATYGAGERRQDDGP------ 165
F+ F S + A+ VL NG+ MP++ + F LNWA+ P
Sbjct: 226 CFLTFPSPSLAQSVLAQVANNGSGQPVTMPNSSKPFVLNWASSVPNTPMSSSFPAANVVM 285
Query: 166 ---------DFTIFVGDLAADVTDYVLQETFRAV---------------YSSVKGAKVVT 201
+++IFVGDLA + ++ L FR + S K AK++
Sbjct: 286 SSAQQQYPREYSIFVGDLAPETSNSDLVAVFRNPVLGLRNDREPKFIRPFLSCKSAKIML 345
Query: 202 DRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
D TG S+GYGFVRF +E++Q R++ EM+G+ C +RPMRI PA K
Sbjct: 346 DPVTGVSRGYGFVRFTEEADQQRALIEMHGLYCLSRPMRISPATAK 391
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 4/68 (5%)
Query: 257 KATYQNTQGSQGE----NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+A N G GE DP NTT+FVGGL P ++++ L+T F +G++ +VK+P GK C
Sbjct: 559 RAILGNLIGPNGEQLTSTDPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHC 618
Query: 313 GFVQFANR 320
GFVQF +
Sbjct: 619 GFVQFVRK 626
>gi|392597176|gb|EIW86498.1| hypothetical protein CONPUDRAFT_78829 [Coniophora puteana
RWD-64-598 SS2]
Length = 439
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 133/267 (49%), Gaps = 31/267 (11%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERVL 132
L++G+L P + E + IF G K+I ++ N+ G YGF+E++ AAE L
Sbjct: 19 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYLDMRAAETAL 76
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT NG ++ TE R+NWA Y + ++D F +FVGDL+ +V D VL + F A +
Sbjct: 77 QTLNGRKIFDTE--IRVNWA-YQGQQNKEDTSGHFHVFVGDLSPEVNDEVLAKAF-AAFG 132
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
++ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +R +R+ A K
Sbjct: 133 TMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAP 192
Query: 253 QQYQKATYQ---------------NTQG------SQGENDPN-NTTIFVGGLDPSVTDDI 290
A N QG S + P+ N+T++VG L P T
Sbjct: 193 AVGAGAPAPRPGGGGGVGTAPAPINFQGGPLSYESVVQQTPSYNSTVYVGNLVPYCTQAD 252
Query: 291 LKTVFGQYGELVHVKIPAGKRCGFVQF 317
L +F G L +++ A + FV+
Sbjct: 253 LIPLFQSIGYLSEIRMQADRGFAFVKL 279
>gi|432875366|ref|XP_004072806.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 127/245 (51%), Gaps = 7/245 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I + N + Y F+EF H A L
Sbjct: 7 RTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGN--DPYCFVEFYDHRHAAASLA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPTSQKK-DTSNHFHVFVGDLSPEITTEDVKAAF-APFGR 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ M G R +R A K A
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRKPPAPKT 180
Query: 254 QYQ-KATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Y+ + + + + ++ P+N T++ GG+ +T+ +++ F +G+++ V++ K
Sbjct: 181 TYESNSKHLSFEEVMSQSSPSNCTVYCGGVSSGLTEQLMRQTFSAFGQIMEVRVFPDKGY 240
Query: 313 GFVQF 317
FV+F
Sbjct: 241 SFVRF 245
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + + + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 97 VFVGDLSPEITTEDVKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHM 156
Query: 136 NGTQMPSTEQNFRLNWAT---------YGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWAT Y + + Q + T++ G +++ +
Sbjct: 157 GGQWLGGRQ--IRTNWATRKPPAPKTTYESNSKHLSFEEVMSQSSPSNCTVYCGGVSSGL 214
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF A + + +V D KGY FVRF ++ +NG
Sbjct: 215 TEQLMRQTFSA-FGQIMEVRVFPD------KGYSFVRFNSHESAAHAIVSVNG 260
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 27/166 (16%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+DD P T++VG+L+ DVT+ ++ + F + K K++ D T + Y FV F D
Sbjct: 2 EDDQPR-TLYVGNLSRDVTEPLILQVFTQI-GPCKSCKMIVD--TAGNDPYCFVEFYDHR 57
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
S+ MNG + G++ K + T SQ ++ N+ +FVG
Sbjct: 58 HAAASLAAMNG----------------RKIMGKEV-KVNWATTPTSQKKDTSNHFHVFVG 100
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANR 320
L P +T + +K F +G + ++ K GFV F N+
Sbjct: 101 DLSPEITTEDVKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNK 146
>gi|326534302|dbj|BAJ89501.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 447
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 135/284 (47%), Gaps = 32/284 (11%)
Query: 54 PPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF 113
P S P G P RS+++G++ P + E+ + +F +G K+IR ++++F
Sbjct: 57 PVSNGNLPPGFDPST----CRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSF 112
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGD 173
GF+++ +A + T +G + Q ++NWA A +R+D F IFVGD
Sbjct: 113 ----GFVDYYDRRSAALAIMTLHGRHIYG--QAIKVNWAF--ASTQREDTSGHFHIFVGD 164
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
L+++V D L F + Y S A+V+ D TGRS+GYGFV F ++ E ++TEM G
Sbjct: 165 LSSEVNDATLYACF-STYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKW 223
Query: 234 CSTRPMRIGPAATKKAATGQQY--QKATYQNTQGSQG---------------ENDPNNTT 276
+R +R A A Q+ A GS EN+P+ TT
Sbjct: 224 LGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTT 283
Query: 277 IFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFA 318
++VG L V D L F G + V++ K GF++++
Sbjct: 284 VYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQEKGFGFIRYS 327
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 81/199 (40%), Gaps = 40/199 (20%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL + ++ + + F +V+ + +T S GYGF+ F + AE +
Sbjct: 160 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 219
Query: 136 NGTQMPSTEQNFRLNWATYGAGERRQD--------------------------------D 163
G + S + R NWAT E +Q+ +
Sbjct: 220 TGKWLGSRQ--IRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPEN 277
Query: 164 GPDFT-IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
PDFT ++VG+L +V L F + G + + + KG+GF+R+ E
Sbjct: 278 NPDFTTVYVGNLGHEVNRDELHRHFYNL-----GVGAIEEVRVQQEKGFGFIRYSTHGEA 332
Query: 223 LRSMTEMNGVLCSTRPMRI 241
++ NG++ +P++
Sbjct: 333 ALAIQMANGLVVRGKPIKC 351
>gi|260830993|ref|XP_002610444.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
gi|229295810|gb|EEN66454.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
Length = 1022
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +FG G S K+I N + Y F+EF H A L
Sbjct: 114 RTLYVGNLSRQVTEQLILQLFGAIGPCKSCKMISEHAGN--DPYCFVEFYDHNHASAALT 171
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ + ++NWAT +G ++ D +FVGDL+ ++ L+ F A +
Sbjct: 172 AMNGRKI--MHKEVKVNWATTPSGNKK-DTSNHHHVFVGDLSPEIDTTDLKAAF-APFGK 227
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK----KA 249
+ A+VV D T +S+GYGFV F ++ + ++ M+G R +R A K K+
Sbjct: 228 ISDARVVRDAQTAKSRGYGFVSFVNKVDAENAIGAMSGQWLGGRAIRTNWATRKPPPPKS 287
Query: 250 ATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAG 309
GQ+ Q S P NTT++ GG+ +T+D+++ F +G + +++
Sbjct: 288 NEGQKQLSYDEVLCQAS-----PTNTTVYCGGITKGLTEDLMRNTFSNFGPIQEIRVFPE 342
Query: 310 KRCGFVQF 317
K F++F
Sbjct: 343 KGYSFIRF 350
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 26/188 (13%)
Query: 59 TQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYG 118
T P G D S+ +++GDL P ++ + + + F G+ +V+R+ QT S GYG
Sbjct: 189 TTPSGNKKDTSNH--HHVFVGDLSPEIDTTDLKAAFAPFGKISDARVVRDAQTAKSRGYG 246
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDG-------------- 164
F+ FV+ AE + +G + + R NWAT + ++G
Sbjct: 247 FVSFVNKVDAENAIGAMSGQWL--GGRAIRTNWATRKPPPPKSNEGQKQLSYDEVLCQAS 304
Query: 165 -PDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQL 223
+ T++ G + +T+ +++ TF + + ++ +V + KGY F+RF
Sbjct: 305 PTNTTVYCGGITKGLTEDLMRNTF-SNFGPIQEIRVFPE------KGYSFIRFFSHEVAA 357
Query: 224 RSMTEMNG 231
++ +NG
Sbjct: 358 MAIVTVNG 365
>gi|346319566|gb|EGX89167.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Cordyceps militaris CM01]
Length = 450
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 132/278 (47%), Gaps = 23/278 (8%)
Query: 59 TQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYG 118
T P G A R+L++G L + E + IF TG + K+I +K YG
Sbjct: 55 TSPGGFRRSAPEPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAK-GFNYG 113
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADV 178
F+E+ AAER +QT NG ++ +E R+NWA ++D F IFVGDL+ +V
Sbjct: 114 FVEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSNTSGKEDTSGHFHIFVGDLSNEV 171
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
D +L + F A + SV A+V+ D TGRS+GYGFV F D E ++++ M+G +R
Sbjct: 172 NDEILTQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRA 230
Query: 239 MRIGPAATKKAATGQQYQKAT------------YQNTQGSQGEND------PN-NTTIFV 279
+R A K + Q Q +Q G D P TT++V
Sbjct: 231 IRCNWANQKGQPSMAQQQAMQAMGLTPTTPFGHHQFPTHGVGSYDVILAQTPTWQTTVYV 290
Query: 280 GGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
G L P T + + +F +G +V + A + F++
Sbjct: 291 GNLTPYTTPNDVVPLFQNFGFVVESRFQADRGFAFIKM 328
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 73/172 (42%), Gaps = 25/172 (14%)
Query: 156 AGERRQDDGPD-FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFV 214
G RR P+ ++VG L VT+ VL++ F V+ K++ D+ + YGFV
Sbjct: 58 GGFRRSAPEPNKRALYVGGLDQRVTEDVLRQIFETT-GHVQNVKIIPDKNA-KGFNYGFV 115
Query: 215 RFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNN 274
+ D R+M +NG +R+ A YQ NT G E+ +
Sbjct: 116 EYDDPGAAERAMQTLNGRRVHQSEIRVNWA----------YQS----NTSGK--EDTSGH 159
Query: 275 TTIFVGGLDPSVTDDILKTVFGQYGELVHVKI------PAGKRCGFVQFANR 320
IFVG L V D+IL F +G + ++ + GFV F +R
Sbjct: 160 FHIFVGDLSNEVNDEILTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDR 211
>gi|148666756|gb|EDK99172.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_f
[Mus musculus]
Length = 375
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 131/248 (52%), Gaps = 7/248 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAF-APFGR 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS 180
Query: 254 QYQKATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Y+ T Q + ++ PNN T++ GG+ +T+ +++ F +G+++ +++ K
Sbjct: 181 TYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGY 240
Query: 313 GFVQFANR 320
FV+F++
Sbjct: 241 SFVRFSSH 248
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 136 NGTQMPSTEQNFRLNWAT---------YGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWAT Y + ++ Q + T++ G + + +
Sbjct: 157 GGQWLGGRQ--IRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGL 214
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 215 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSVNG 260
>gi|157114083|ref|XP_001657973.1| nucleolysin tia-1 [Aedes aegypti]
gi|108877443|gb|EAT41668.1| AAEL006710-PA [Aedes aegypti]
Length = 453
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 123/251 (49%), Gaps = 10/251 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++FG G S K+IR S+ Y FIE+ +H +A+ L
Sbjct: 8 KTLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREAS---SDPYAFIEYANHQSAQTALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N E ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRLFLKKE--IKVNWATSPGNQPKTDTSQHHHIFVGDLSPEIETETLREAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ ++V D T +S+GY FV F ++E ++ MNG +R +R + K A +
Sbjct: 122 ISNCRIVRDPQTLKSRGYAFVSFVKKAEAENAIQMMNGQWLGSRSIRTNWSTRKPPAPRE 181
Query: 254 QYQKATYQNTQGSQ---GENDPNNTTIFVGGLDPSVTDDIL-KTVFGQYGELVHVKIPAG 309
+ T G + P NTT++ GG + +D+L FG +G++ V++
Sbjct: 182 NIKGIKSGKTPGFEEIYNNTGPTNTTVYCGGFPANAINDMLIHKHFGLFGQIQDVRVFKD 241
Query: 310 KRCGFVQFANR 320
K F++F N+
Sbjct: 242 KGYAFIKFNNK 252
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 27/183 (14%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + F GE + +++R+ QT S GY F+ F
Sbjct: 85 GNQPKTDTSQHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSRGYAFVSF 144
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATY------------------GAGERRQDDG 164
V A AE +Q NG + S ++ R NW+T G E + G
Sbjct: 145 VKKAEAENAIQMMNGQWLGS--RSIRTNWSTRKPPAPRENIKGIKSGKTPGFEEIYNNTG 202
Query: 165 P-DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQL 223
P + T++ G A+ + +L ++ ++ +V D KGY F++F ++
Sbjct: 203 PTNTTVYCGGFPANAINDMLIHKHFGLFGQIQDVRVFKD------KGYAFIKFNNKESAA 256
Query: 224 RSM 226
R++
Sbjct: 257 RAI 259
>gi|310798412|gb|EFQ33305.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 482
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 127/266 (47%), Gaps = 29/266 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G L + E + IF TG + K+I +K YGF+E+ AAER +Q
Sbjct: 87 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAK-GYNYGFVEYDDPGAAERAMQ 145
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ +E R+NWA ++D F IFVGDL+ +V D +L + F A + S
Sbjct: 146 TLNGRRVHQSE--IRVNWAYQSNTSSKEDTSNHFHIFVGDLSNEVNDEILTQAFSA-FGS 202
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V A+V+ D TGRS+GYGFV F D + ++++ M+G +R +R A K +
Sbjct: 203 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 262
Query: 254 QYQK----------------------ATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDIL 291
Q Q A+Y+ + TT +VG L P T + +
Sbjct: 263 QQQAMQAMGLTPTTPFGHHQFPAHGVASYEVV---LAQTPSWQTTCYVGNLTPYTTPNDV 319
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQF 317
+F +G +V + A + F++
Sbjct: 320 VPLFQNFGYVVESRFQADRGFAFIKM 345
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 72/172 (41%), Gaps = 24/172 (13%)
Query: 155 GAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFV 214
G G R + ++VG L VT+ VL++ F V+ K++ D+ + YGFV
Sbjct: 75 GFGRRAAPEPNKRALYVGGLDQRVTEDVLRQIFETT-GHVQNVKIIPDKNA-KGYNYGFV 132
Query: 215 RFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNN 274
+ D R+M +NG +R+ A YQ T S E+ N+
Sbjct: 133 EYDDPGAAERAMQTLNGRRVHQSEIRVNWA----------YQSNT------SSKEDTSNH 176
Query: 275 TTIFVGGLDPSVTDDILKTVFGQYGELVHVKI------PAGKRCGFVQFANR 320
IFVG L V D+IL F +G + ++ + GFV F +R
Sbjct: 177 FHIFVGDLSNEVNDEILTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDR 228
>gi|224115710|ref|XP_002332123.1| predicted protein [Populus trichocarpa]
gi|222874943|gb|EEF12074.1| predicted protein [Populus trichocarpa]
Length = 425
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 142/307 (46%), Gaps = 30/307 (9%)
Query: 28 QQSQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEE 87
QQ Q H P V + P P P +S R +++G++ + +
Sbjct: 2 QQQALLQHHHMYHHPALVASAMSQMEPILGGNLPPAFDPSSS---CRRVYVGNIHVNVTD 58
Query: 88 SYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNF 147
+A +F G K+IR +++ YGF+++ ++A + T +G Q+ Q
Sbjct: 59 KLLAEVFATAGPLAGCKLIRKDKSS----YGFVDYHDQSSAALAIMTLHGRQLYG--QAL 112
Query: 148 RLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGR 207
++NWA YG +R+D F +FVGDL+ +V D L F +V+ S A+V+ D TGR
Sbjct: 113 KVNWA-YG-NSQREDTSGHFHVFVGDLSPEVIDANLFACF-SVFPSCSNARVMWDHKTGR 169
Query: 208 SKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN----T 263
SKGYGFV F ++ E ++ ++ G R +R ATK + + Q + QN T
Sbjct: 170 SKGYGFVSFRNQQEAQSAINDLTGKWLGNRQIRCN-WATKGVESNEDKQNSDNQNAVVLT 228
Query: 264 QGSQG-----------ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGK 310
GS EN+P TT++VG L VT L F G V V++ K
Sbjct: 229 NGSSEGGQESTNEEAPENNPAYTTVYVGNLSHEVTQAELHRHFHALGAGVIEDVRVQRDK 288
Query: 311 RCGFVQF 317
GFV++
Sbjct: 289 GFGFVRY 295
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 37/210 (17%)
Query: 62 YGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIE 121
YG + + G +++GDL P + ++ + + F + +V+ + +T S+GYGF+
Sbjct: 118 YGNSQREDTSGHFHVFVGDLSPEVIDANLFACFSVFPSCSNARVMWDHKTGRSKGYGFVS 177
Query: 122 FVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA------------------------- 156
F + A+ + G + + + R NWAT G
Sbjct: 178 FRNQQEAQSAINDLTGKWLGNRQ--IRCNWATKGVESNEDKQNSDNQNAVVLTNGSSEGG 235
Query: 157 ----GERRQDDGPDFT-IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGY 211
E ++ P +T ++VG+L+ +VT L F A+ GA V+ D R KG+
Sbjct: 236 QESTNEEAPENNPAYTTVYVGNLSHEVTQAELHRHFHAL-----GAGVIEDVRVQRDKGF 290
Query: 212 GFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
GFVR+ E ++ NG + +P++
Sbjct: 291 GFVRYNTHEEAASAIQTGNGKIVCGKPVKC 320
>gi|380478106|emb|CCF43782.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 482
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 127/266 (47%), Gaps = 29/266 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G L + E + IF TG + K+I +K YGF+E+ AAER +Q
Sbjct: 87 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAK-GYNYGFVEYDDPGAAERAMQ 145
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ +E R+NWA ++D F IFVGDL+ +V D +L + F A + S
Sbjct: 146 TLNGRRVHQSE--IRVNWAYQSNTSSKEDTSNHFHIFVGDLSNEVNDEILTQAFSA-FGS 202
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V A+V+ D TGRS+GYGFV F D + ++++ M+G +R +R A K +
Sbjct: 203 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 262
Query: 254 QYQK----------------------ATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDIL 291
Q Q A+Y+ + TT +VG L P T + +
Sbjct: 263 QQQAMQAMGLTPTTPFGHHQFPAHGVASYEVV---LAQTPSWQTTCYVGNLTPYTTPNDV 319
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQF 317
+F +G +V + A + F++
Sbjct: 320 VPLFQNFGYVVESRFQADRGFAFIKM 345
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 72/172 (41%), Gaps = 24/172 (13%)
Query: 155 GAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFV 214
G G R + ++VG L VT+ VL++ F V+ K++ D+ + YGFV
Sbjct: 75 GFGRRAAPEPNKRALYVGGLDQRVTEDVLRQIFETT-GHVQNVKIIPDKNA-KGYNYGFV 132
Query: 215 RFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNN 274
+ D R+M +NG +R+ A YQ T S E+ N+
Sbjct: 133 EYDDPGAAERAMQTLNGRRVHQSEIRVNWA----------YQSNT------SSKEDTSNH 176
Query: 275 TTIFVGGLDPSVTDDILKTVFGQYGELVHVKI------PAGKRCGFVQFANR 320
IFVG L V D+IL F +G + ++ + GFV F +R
Sbjct: 177 FHIFVGDLSNEVNDEILTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDR 228
>gi|47086779|ref|NP_997793.1| cytotoxic granule-associated RNA binding protein 1 [Danio rerio]
gi|28279551|gb|AAH45368.1| Cytotoxic granule-associated RNA binding protein 1 [Danio rerio]
Length = 386
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 130/245 (53%), Gaps = 7/245 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +FG G S K+I + N + Y F+EF H A L
Sbjct: 8 KTLYVGNLSRDVTEALIMQLFGQIGPCKSCKMIVDTAGN--DPYCFVEFFEHRHAAASLA 65
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 66 AMNGRKIMGKE--VKVNWATSPSSQKK-DTSNHFHVFVGDLSPEITTDDIRAAF-APFGR 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 122 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKA 181
Query: 254 QYQKAT-YQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Y+ T + + ++ P+N T++ GG+ +T+ +++ F +G+++ V++ K
Sbjct: 182 TYETNTKHLSFDEVVNQSSPSNCTVYCGGVTTGLTEQLMRQTFSPFGQIMEVRVFPDKGY 241
Query: 313 GFVQF 317
FV+F
Sbjct: 242 SFVRF 246
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 98 VFVGDLSPEITTDDIRAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 157
Query: 136 NGTQMPSTEQNFRLNWAT---------YGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWAT Y + Q + T++ G + +
Sbjct: 158 GGQWLGGRQ--IRTNWATRKPPAPKATYETNTKHLSFDEVVNQSSPSNCTVYCGGVTTGL 215
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 216 TEQLMRQTF-SPFGQIMEVRVFPD------KGYSFVRFNSHESAAHAIVSVNG 261
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 26/165 (15%)
Query: 162 DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
DD T++VG+L+ DVT+ ++ + F + K K++ D T + Y FV F +
Sbjct: 3 DDEQPKTLYVGNLSRDVTEALIMQLFGQI-GPCKSCKMIVD--TAGNDPYCFVEFFEHRH 59
Query: 222 QLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGG 281
S+ MNG + G++ K + + SQ ++ N+ +FVG
Sbjct: 60 AAASLAAMNG----------------RKIMGKEV-KVNWATSPSSQKKDTSNHFHVFVGD 102
Query: 282 LDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANR 320
L P +T D ++ F +G + ++ K GFV F N+
Sbjct: 103 LSPEITTDDIRAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNK 147
>gi|321262697|ref|XP_003196067.1| non-translatable mRNA -binding protein [Cryptococcus gattii WM276]
gi|317462542|gb|ADV24280.1| Non-translatable mRNA -binding protein, putative [Cryptococcus
gattii WM276]
Length = 434
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 111/191 (58%), Gaps = 11/191 (5%)
Query: 62 YGVAPDASSDGIR--SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG--- 116
YG+ P S++ + L++G+L P + + + IF G VS K+I+++ NF G
Sbjct: 8 YGITPGQSAEAPKRPHLYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDR--NFQHGGFN 65
Query: 117 YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
YGF+E+ +AE+ L T NG ++ E R+NWA Y + ++D + +FVGDL+
Sbjct: 66 YGFVEYADMRSAEQALTTLNGRKIFDAE--IRVNWA-YQGNQNKEDTQHHYHVFVGDLSP 122
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+V D VL + F A + S+ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +
Sbjct: 123 EVNDDVLSKAFGA-FGSLSEARVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLGS 181
Query: 237 RPMRIGPAATK 247
R +R+ A K
Sbjct: 182 RAIRVNWANQK 192
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 25/159 (15%)
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSK-GYGFVRFGDESEQLRSMT 227
++VG+L+ VTDY+L E F AV V AK++ DR YGFV + D +++T
Sbjct: 24 LYVGNLSPRVTDYILTEIF-AVAGPVVSAKIIQDRNFQHGGFNYGFVEYADMRSAEQALT 82
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG +R+ A YQ Q E+ ++ +FVG L P V
Sbjct: 83 TLNGRKIFDAEIRVNWA---------------YQGNQNK--EDTQHHYHVFVGDLSPEVN 125
Query: 288 DDILKTVFGQYGELVHVKI----PAGKR--CGFVQFANR 320
DD+L FG +G L ++ +GK GF+ F ++
Sbjct: 126 DDVLSKAFGAFGSLSEARVMWDMNSGKSRGYGFLSFRDK 164
>gi|226528044|dbj|BAH56564.1| TIA-1-related RNA binding protein [Spodoptera litura]
Length = 388
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 130/252 (51%), Gaps = 11/252 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E +I ++FG GE K+IR ++ Y F+EF SH AA L
Sbjct: 8 KTLYVGNLDASVTEVFICTLFGQIGEVKGCKIIREPG---NDPYAFLEFTSHTAAATALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N + ++ ++NWAT + + D IFVGDL+ ++ ++L++ F A +
Sbjct: 65 AMNKRVV--LDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILRDAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK---KAA 250
+ ++V D T +SKGY FV F +++ ++ MNG +R +R + K K
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPSKPN 181
Query: 251 TGQQYQKATYQNT-QGSQGENDPNNTTIFVGGLDPSV-TDDILKTVFGQYGELVHVKIPA 308
G K Q T ++ P NTT++ GG +V T+D+++ F Q+G++ V++
Sbjct: 182 EGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNVITEDLMQNTFSQFGQIQDVRVFR 241
Query: 309 GKRCGFVQFANR 320
K F++F +
Sbjct: 242 DKGYAFIRFTTK 253
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 30/175 (17%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + F GE + +++R+ QT S+GY F+ F
Sbjct: 85 GNQPKTDTSNHHHIFVGDLSPEIETHILRDAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 144
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATY--------GAGERRQDDGPDF------- 167
V A AE +Q NG + S ++ R NW+T GA ++ P F
Sbjct: 145 VKKADAEAAIQAMNGQWLGS--RSIRTNWSTRKPPSKPNEGAPSSKRAKQPTFDEVYNQS 202
Query: 168 -----TIFVGDLAADV-TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRF 216
T++ G ++V T+ ++Q TF + + ++ +V R KGY F+RF
Sbjct: 203 SPTNTTVYCGGFTSNVITEDLMQNTF-SQFGQIQDVRVF------RDKGYAFIRF 250
>gi|297832034|ref|XP_002883899.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
gi|297329739|gb|EFH60158.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
Length = 655
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 137/271 (50%), Gaps = 29/271 (10%)
Query: 54 PPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF 113
PP+ T P A A+ G SL++GDL P + +S + F G+ VS +V R+ T
Sbjct: 22 PPAMVTGPGAAA--AAQFGTTSLYVGDLDPNVTDSQLFDAFSQMGQVVSVRVCRDLATRR 79
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGD 173
S GYG++ F S A R +Q N +P + R+ ++ RR G IF+ +
Sbjct: 80 SLGYGYVNFTSPQDAARAIQELN--YIPLNGKPVRVMYSHRDPSVRRSGAG---NIFIKN 134
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
L + L +TF +V+ ++ KV D ++G+SKGYGFV++ E ++M ++NG+L
Sbjct: 135 LDKSIDHKALHDTF-SVFGNIISCKVAVD-SSGQSKGYGFVQYETEESAQKAMGQLNGML 192
Query: 234 CSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKT 293
+ + + +GP + + +++ G N T ++V L S TDD LK
Sbjct: 193 LNDKQVYVGP-----------FLRRQERDSTG----NKTIFTNVYVKNLAESTTDDDLKN 237
Query: 294 VFGQYGEL---VHVKIPAG--KRCGFVQFAN 319
+FG++G++ V +K G K GFV F N
Sbjct: 238 IFGEFGKITSAVVMKDGEGKPKGFGFVNFEN 268
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 119/267 (44%), Gaps = 30/267 (11%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S KV + S+GYGF+++ +
Sbjct: 120 PSVRRSGAGNIFIKNLDKSIDHKALHDTFSVFGNIISCKVAVDSSGQ-SKGYGFVQYETE 178
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQ--DDGPDFTIF----VGDLAADVT 179
+A++ + NG + + G RRQ D + TIF V +LA T
Sbjct: 179 ESAQKAMGQLNGMLLNDKQ-------VYVGPFLRRQERDSTGNKTIFTNVYVKNLAESTT 231
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
D L+ F + + A V+ D G+ KG+GFV F + + +++ +NG +
Sbjct: 232 DDDLKNIF-GEFGKITSAVVMKD-GEGKPKGFGFVNFENADDAAKAVESLNGKTFDDKEW 289
Query: 240 RIGPAATKKAATGQ---QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFG 296
+G A K + QY+++ + Q N ++V LD SV+D+ LK +F
Sbjct: 290 FVGRAQKKSEREMELKVQYEQSLKEAADKFQSSN------LYVKNLDDSVSDEKLKELFT 343
Query: 297 QYGELVHVKI---PAG--KRCGFVQFA 318
YG + K+ P G + GFV F+
Sbjct: 344 PYGTVTSCKVMRDPNGMSRGSGFVAFS 370
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 86/185 (46%), Gaps = 14/185 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L + + +IFG G+ S V+++ + +G+GF+ F + A + +++
Sbjct: 220 NVYVKNLAESTTDDDLKNIFGEFGKITSAVVMKDGEGK-PKGFGFVNFENADDAAKAVES 278
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG +E+ L + + D ++V +L V+D L
Sbjct: 279 LNGKTFDDKEWFVGRAQKKSEREMELKVQYEQSLKEAADKFQSSNLYVKNLDDSVSDEKL 338
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+E F Y +V KV+ D G S+G GFV F E ++M+EM+G + +P+ +
Sbjct: 339 KELFTP-YGTVTSCKVMRD-PNGMSRGSGFVAFSTPEEATKAMSEMSGKMIENKPLYVAV 396
Query: 244 AATKK 248
A K+
Sbjct: 397 AQRKE 401
>gi|66472532|ref|NP_001018445.1| tRNA selenocysteine 1-associated protein 1 [Danio rerio]
gi|82228819|sp|Q503H1.1|TSAP1_DANRE RecName: Full=tRNA selenocysteine 1-associated protein 1; AltName:
Full=tRNA selenocysteine-associated protein 1
gi|63102413|gb|AAH95331.1| Zgc:110606 [Danio rerio]
gi|182888884|gb|AAI64339.1| Zgc:110606 protein [Danio rerio]
Length = 314
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 99/179 (55%), Gaps = 9/179 (5%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGE-FVSGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
+ SLW+G+L+P+M+E +I F GE V ++IR+K T + GYGF+E A ER
Sbjct: 1 MNSLWMGNLEPYMDEDFICRAFAQMGETVVKIRLIRDKITGKNAGYGFVELADDTAVERC 60
Query: 132 LQTFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
L+ NG +P + F+L+ + YG +Q + F++FV DL DV D +L E F
Sbjct: 61 LRKVNGKPLPGATPPKRFKLSRSNYG----KQGESSTFSLFVSDLTPDVDDGMLYEFFHY 116
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
+SS K+V D G SK GFV F E EQ R++ ++ G + +R+ A+++
Sbjct: 117 HFSSCCSGKIVLD-ANGHSKCCGFVSFESEREQKRALVDLQGATGLGKKALRLSLASSR 174
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 22/156 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++G+L + + + F + +V +++ D+ TG++ GYGFV D++ R +
Sbjct: 3 SLWMGNLEPYMDEDFICRAFAQMGETVVKIRLIRDKITGKNAGYGFVELADDTAVERCLR 62
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT + ++ Y G QGE+ + ++FV L P V
Sbjct: 63 KVNG-----KPL---PGATPPKRF--KLSRSNY----GKQGES--STFSLFVSDLTPDVD 106
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQF 317
D +L F + G++V K CGFV F
Sbjct: 107 DGMLYEFFHYHFSSCCSGKIVLDANGHSKCCGFVSF 142
>gi|451847206|gb|EMD60514.1| hypothetical protein COCSADRAFT_29739 [Cochliobolus sativus ND90Pr]
Length = 506
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 147/328 (44%), Gaps = 43/328 (13%)
Query: 30 SQQQQQQHQTPVP-PPVGWTPQPVPPPSQQTQPYGVAPDASSDG--------------IR 74
+Q Q QQH P P PV P P+ + P P + + G R
Sbjct: 25 NQPQAQQHMPPPPLAPVIIPQNNNPIPTAISSPMSGNPMSPTSGQPGYVPRRAAPEPNKR 84
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF----SEG--YGFIEFVSHAAA 128
+L++G L P + E + IF TG S K+I +K + S+G YGF+E+ AA
Sbjct: 85 ALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPSFNSKGFNYGFVEYDDPGAA 144
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
ER + T NG ++ + E R+NWA ++D F IFVGDL+ +V D VL + F
Sbjct: 145 ERGMATLNGRRIHNNE--IRVNWAYQSNNTAKEDTSNHFHIFVGDLSNEVNDEVLLQAF- 201
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ + V A+V+ D TGRS+GYGFV F D ++ R++ M+G +R +R A K
Sbjct: 202 STFGPVSEARVMWDMKTGRSRGYGFVAFRDRADAERALNSMDGEWLGSRAIRCNWANQKG 261
Query: 249 AATGQQYQKATYQN-------------TQGSQGEN-----DPN-NTTIFVGGLDPSVTDD 289
+ Q Q T G Q + P TT +VG L P +
Sbjct: 262 QPSISQQQAMASMGMTPTTPFGHHHFPTHGVQSYDMVVAQTPQWQTTCYVGNLTPYTSQA 321
Query: 290 ILKTVFGQYGELVHVKIPAGKRCGFVQF 317
L +F +G + + + + F++
Sbjct: 322 DLVPLFQNFGYVTETRFQSDRGFAFIKM 349
>gi|227206148|dbj|BAH57129.1| AT4G27000 [Arabidopsis thaliana]
Length = 88
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/72 (77%), Positives = 61/72 (84%)
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
+L ETF+AVYSSVKGAKVV DRTTGRSKGYGFVRF DES Q+R+MTEMNG CS+RPMR
Sbjct: 1 MLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVRFADESGQIRAMTEMNGQYCSSRPMRT 60
Query: 242 GPAATKKAATGQ 253
GPAA KK T Q
Sbjct: 61 GPAANKKPLTMQ 72
>gi|330933733|ref|XP_003304275.1| hypothetical protein PTT_16807 [Pyrenophora teres f. teres 0-1]
gi|311319203|gb|EFQ87630.1| hypothetical protein PTT_16807 [Pyrenophora teres f. teres 0-1]
Length = 485
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 145/311 (46%), Gaps = 35/311 (11%)
Query: 36 QHQTPVPPPVG--WTPQPVPPPSQQTQ--PYGVAPDASSDGIRSLWIGDLQPWMEESYIA 91
Q+ P+P + + P+ P S Q P AP+ + R+L++G L P + E +
Sbjct: 44 QNNNPIPTAISSPMSGNPMSPTSGQPGYVPRRAAPEPNK---RALYVGGLDPRVTEDVLR 100
Query: 92 SIFGHTGEFVSGKVIRNKQTNF----SEG--YGFIEFVSHAAAERVLQTFNGTQMPSTEQ 145
IF TG S K+I +K + S+G YGF+E+ AAER + T NG ++ + E
Sbjct: 101 QIFETTGHVQSVKIIPDKTASSPSFNSKGFNYGFVEYDDPGAAERGMATLNGRRIHNNE- 159
Query: 146 NFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTT 205
R+NWA ++D F IFVGDL+ +V D VL + F + + V A+V+ D T
Sbjct: 160 -IRVNWAYQSNNTAKEDTSNHFHIFVGDLSNEVNDEVLLQAF-STFGPVSEARVMWDMKT 217
Query: 206 GRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN--- 262
GRS+GYGFV F D ++ R+++ M+G +R +R A K + Q Q
Sbjct: 218 GRSRGYGFVAFRDRADADRALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMASMGMTP 277
Query: 263 ----------TQGSQ------GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
T G Q + TT +VG L P + L +F +G + +
Sbjct: 278 TTPFGHHHFPTHGVQSYDMVVSQTPAWQTTCYVGNLTPYTSQSDLVPLFQNFGYVTETRF 337
Query: 307 PAGKRCGFVQF 317
+ + F++
Sbjct: 338 QSDRGFAFIKM 348
>gi|336376899|gb|EGO05234.1| hypothetical protein SERLA73DRAFT_44756 [Serpula lacrymans var.
lacrymans S7.3]
Length = 523
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 135/261 (51%), Gaps = 25/261 (9%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERVL 132
L++G+L P + E + IF G K+I ++ N+ G YGF+E++ AAE L
Sbjct: 16 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYMDMRAAETAL 73
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT NG ++ TE R+NWA Y + ++D + +FVGDL+ +V D +L + F A +
Sbjct: 74 QTLNGRKIFDTE--IRVNWA-YQGQQNKEDTTGHYHVFVGDLSPEVNDEILGKAFSA-FG 129
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK---- 248
++ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +R +R+ A K
Sbjct: 130 TMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGSV 189
Query: 249 --------AATGQQYQKATYQN---TQGSQGENDPN-NTTIFVGGLDPSVTDDILKTVFG 296
ATG +Q + S + P+ N+T++VG L P T L +F
Sbjct: 190 AVASPPRPGATGGAPAPINFQGGPLSYDSVVQQTPSYNSTVYVGNLVPYCTQADLIPLFQ 249
Query: 297 QYGELVHVKIPAGKRCGFVQF 317
G L +++ A + FV+
Sbjct: 250 SIGYLSEIRMQADRGFAFVKL 270
>gi|332029721|gb|EGI69600.1| Nucleolysin TIAR [Acromyrmex echinatior]
Length = 393
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 118/250 (47%), Gaps = 9/250 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E + ++F G K+IR ++ Y F+EF +H A L
Sbjct: 8 RTLYVGNLDTSVSEDLLCALFSQIGAVKGCKIIREPG---NDPYAFVEFTNHQCAATALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N ++ ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRSF--LDKEMKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG---PAATKKAA 250
+ ++V D T +SKGY FV F +SE ++ MNG +R +R +
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNWSTRKPPPPRS 181
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
++ + N + ++ P N T++ GG +TD+++K F +G + +++ K
Sbjct: 182 ERPRHSNNSKPNYEEVYNQSSPTNCTVYCGGFTNGITDELIKKTFSPFGTIQDIRVFKDK 241
Query: 311 RCGFVQFANR 320
F++F +
Sbjct: 242 GYAFIKFTTK 251
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 40/218 (18%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + F GE + +++R+ QT S+GY F+ F
Sbjct: 85 GNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 144
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT-------YGAGERRQDDGPDF-------- 167
V + AE + NG + S ++ R NW+T + P++
Sbjct: 145 VKKSEAEAAINAMNGQWLGS--RSIRTNWSTRKPPPPRSERPRHSNNSKPNYEEVYNQSS 202
Query: 168 ----TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQL 223
T++ G +TD ++++TF + + +++ +V D KGY F++F +
Sbjct: 203 PTNCTVYCGGFTNGITDELIKKTF-SPFGTIQDIRVFKD------KGYAFIKFTTKEAAT 255
Query: 224 RSM-----TEMNG--VLC-----STRPMRIGPAATKKA 249
++ TE+NG V C + P +GP A +A
Sbjct: 256 HAIESTHNTEINGSIVKCFWGKENGDPNSVGPNANHQA 293
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKRCGFVQFANR 320
+ N T++VG LD SV++D+L +F Q G + KI P FV+F N
Sbjct: 4 ESNPRTLYVGNLDTSVSEDLLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNH 56
>gi|110756942|ref|XP_395357.3| PREDICTED: nucleolysin TIAR [Apis mellifera]
gi|340713958|ref|XP_003395500.1| PREDICTED: nucleolysin TIAR-like [Bombus terrestris]
gi|350421173|ref|XP_003492759.1| PREDICTED: nucleolysin TIAR-like [Bombus impatiens]
gi|380025693|ref|XP_003696603.1| PREDICTED: nucleolysin TIAR-like [Apis florea]
Length = 392
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 117/250 (46%), Gaps = 9/250 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E + ++F G K+IR ++ Y F+EF +H A L
Sbjct: 8 RTLYVGNLDTSVSEELLCALFSQIGAVKGCKIIREPG---NDPYAFVEFTNHQCAATALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N + E ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRSFLNKE--MKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG---PAATKKAA 250
+ ++V D T +SKGY FV F +SE ++ MNG +R +R +
Sbjct: 122 ISNCRIVRDPQTMKSKGYAFVSFVKKSEAEAAIAAMNGQWLGSRSIRTNWSTRKPPPPRS 181
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
++ + N + ++ P N T++ GG +TDD++ F +G + +++ K
Sbjct: 182 ERPRHSNNSKPNYEEVYNQSSPTNCTVYCGGFTNGITDDLITKTFSPFGTIQDIRVFKDK 241
Query: 311 RCGFVQFANR 320
F++F +
Sbjct: 242 GYAFIKFTTK 251
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 40/218 (18%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + F GE + +++R+ QT S+GY F+ F
Sbjct: 85 GNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTMKSKGYAFVSF 144
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT-------YGAGERRQDDGPDF-------- 167
V + AE + NG + S ++ R NW+T + P++
Sbjct: 145 VKKSEAEAAIAAMNGQWLGS--RSIRTNWSTRKPPPPRSERPRHSNNSKPNYEEVYNQSS 202
Query: 168 ----TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQL 223
T++ G +TD ++ +TF + + +++ +V D KGY F++F +
Sbjct: 203 PTNCTVYCGGFTNGITDDLITKTF-SPFGTIQDIRVFKD------KGYAFIKFTTKEAAT 255
Query: 224 RSM-----TEMNG--VLC-----STRPMRIGPAATKKA 249
++ TE+NG V C + P +GP A +A
Sbjct: 256 HAIESTHNTEINGSIVKCFWGKENGDPNSVGPNANHQA 293
>gi|443924183|gb|ELU43247.1| polyadenylate-binding protein [Rhizoctonia solani AG-1 IA]
Length = 498
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 141/297 (47%), Gaps = 38/297 (12%)
Query: 53 PPPSQQTQPYGVAPDASSDGIR--SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQ 110
P P+ V+ +S++ R L++G+L P + E + IF G K+I ++
Sbjct: 23 PAPASDHGCLSVSTCSSAEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR- 81
Query: 111 TNFSEG---YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDF 167
N+ G YGF+E++ AAE LQT NG ++ TE R+NWA Y + ++D +
Sbjct: 82 -NYQHGGQNYGFVEYMDMRAAETALQTLNGRKIFDTE--IRVNWA-YQGTQNKEDTSNHY 137
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+FVGDL+ +V D VL + F A + S+ A+V+ D +G+S+GYGF+ F D+++ +++
Sbjct: 138 HVFVGDLSPEVNDEVLAKAF-AAFGSLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIA 196
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATY--------------------QNTQGSQ 267
MNG +R +R+ A K + G N QG
Sbjct: 197 TMNGEWLGSRAIRVNWANQKTQSGGGGGMPPGMPSMGDSMGMGGGAMGGVPAPMNFQGGP 256
Query: 268 -------GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
+ NTT++VG L P T L +F G L +++ A + FV+
Sbjct: 257 LSYESVVSQTPAYNTTVYVGNLVPYCTQADLIPLFQSIGYLSEIRMQADRGFAFVKL 313
>gi|225444659|ref|XP_002277008.1| PREDICTED: nucleolysin TIAR isoform 2 [Vitis vinifera]
Length = 426
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 143/289 (49%), Gaps = 33/289 (11%)
Query: 52 VPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQT 111
PP + + P S RS+++G++ P + E + +F TG K+IR +++
Sbjct: 32 APPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKLIRKEKS 91
Query: 112 NFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFV 171
+ YGF+++ +A + T NG + Q ++NWA A +R+D + IFV
Sbjct: 92 S----YGFVDYFDRRSAALSIVTLNGRHL--FGQPIKVNWAY--ASSQREDTSGHYNIFV 143
Query: 172 GDLAADVTDYVLQETFRAVY----SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
GDL+ +VTD L F +VY S ++ A+V+ D+ TGRS+G+GFV F ++ E ++
Sbjct: 144 GDLSPEVTDATLFACF-SVYPSCSSGIRDARVMWDQKTGRSRGFGFVSFRNQQEAQSAIN 202
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQ-----KATYQNTQGSQG-----------END 271
++NG +R +R A K A G + + K+ + T G+ EN+
Sbjct: 203 DLNGRWLGSRQIRCNWAT--KGAGGNEDKPNSDAKSVVELTNGTSEDGKDKSNDEAPENN 260
Query: 272 PNNTTIFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFA 318
TT++VG L P VT L F G + V++ K GFV+++
Sbjct: 261 LQYTTVYVGNLAPEVTSVDLHRHFHALGAGAIEDVRVQRDKGFGFVRYS 309
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 41/206 (19%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSG----KVIRNKQTNFSEGYGFIEFVSH 125
+ G ++++GDL P + ++ + + F SG +V+ +++T S G+GF+ F +
Sbjct: 135 TSGHYNIFVGDLSPEVTDATLFACFSVYPSCSSGIRDARVMWDQKTGRSRGFGFVSFRNQ 194
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAG-------------------------ERR 160
A+ + NG + S + R NWAT GAG ++
Sbjct: 195 QEAQSAINDLNGRWLGSRQ--IRCNWATKGAGGNEDKPNSDAKSVVELTNGTSEDGKDKS 252
Query: 161 QDDGPD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVR 215
D+ P+ T++VG+LA +VT L F A+ GA + D R KG+GFVR
Sbjct: 253 NDEAPENNLQYTTVYVGNLAPEVTSVDLHRHFHAL-----GAGAIEDVRVQRDKGFGFVR 307
Query: 216 FGDESEQLRSMTEMNGVLCSTRPMRI 241
+ +E ++ N + +P++
Sbjct: 308 YSTHAEAALAIQMGNARILCGKPIKC 333
>gi|294658145|ref|XP_002770728.1| DEHA2F02596p [Debaryomyces hansenii CBS767]
gi|202952907|emb|CAR66259.1| DEHA2F02596p [Debaryomyces hansenii CBS767]
Length = 747
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 110/209 (52%), Gaps = 24/209 (11%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHT-GEFVSGKVIR--------NKQTNFSEGYGFIE 121
D R+LW+GDL PW++E I+ ++ + V+ K+I+ N Q GY F+E
Sbjct: 106 DSPRTLWMGDLDPWLDEGAISDLWWQILHKKVTVKIIKPKTPKPENNAQGLSHSGYCFVE 165
Query: 122 FVSHAAAERVL----QTFNGTQMPSTEQ----------NFRLNWATYGAGERRQDDGPDF 167
F S A++ L Q MPS +Q FRLNWA+ P++
Sbjct: 166 FESFDDAQQALGLNGQLLPDIAMPSQQQFPNNPDNQKKYFRLNWASGATLSAPIVQTPEY 225
Query: 168 TIFVGDLAADVTDYVLQETFRAVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
++FVGDL+A T+ L F+ + +S+K +V+TD +G+S+ +GFVRF DESE+ R++
Sbjct: 226 SLFVGDLSASTTEAHLLAFFQKSFPTSIKTVRVMTDPVSGKSRCFGFVRFTDESERQRAL 285
Query: 227 TEMNGVLCSTRPMRIGPAATKKAATGQQY 255
EM+G RP+R+ A + +Y
Sbjct: 286 VEMHGAWFGGRPLRVALATPRNVGGKLRY 314
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%)
Query: 253 QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+Q + Q Q Q DPNNTT+FVGGL VT+ L T+F +G + VKIP GK C
Sbjct: 401 EQLRSPNLQGGQHGQPFTDPNNTTVFVGGLSSEVTEQTLFTLFKPFGIIQQVKIPPGKNC 460
Query: 313 GFVQFANR 320
GF+++++R
Sbjct: 461 GFIKYSSR 468
>gi|408392881|gb|EKJ72170.1| hypothetical protein FPSE_07657 [Fusarium pseudograminearum CS3096]
Length = 484
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 128/272 (47%), Gaps = 30/272 (11%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L+IG L + E + IF TG + K+I +K YGF+E+ AAER +Q
Sbjct: 82 RALYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPDKNAR-GYNYGFVEYDDPGAAERAMQ 140
Query: 134 TFNGTQM------PSTEQN---FRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQ 184
T NG ++ P T +N R+NWA ++D F IFVGDL+ +V D VL
Sbjct: 141 TLNGRRVHQSVPYPDTTRNSKEIRVNWAYQSNTTNKEDTSNHFHIFVGDLSNEVNDEVLT 200
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
+ F A + SV A+V+ D TGRS+GYGFV F D E ++++ M+G +R +R A
Sbjct: 201 QAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWA 259
Query: 245 ATKKAATG-------------------QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
K + Q+ + + + TT++VG L P
Sbjct: 260 NQKGQPSMAQQQAMQAMGMTPTTPYGHHQFPAHGVASYEVILTQTPSWQTTVYVGNLTPY 319
Query: 286 VTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
T + + +F +G +V + A + F++
Sbjct: 320 TTPNDVVPLFQNFGFVVESRFQADRGFAFIKM 351
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 16/188 (8%)
Query: 141 PSTEQNFRLNWATYGAGERRQDDGPD-FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKV 199
P + N + T G RR P+ +++G L VT+ VL++ F V+ K+
Sbjct: 55 PRSADNGGIMSPTSAGGFRRAAPEPNKRALYIGGLDQRVTEEVLRQIFETT-GHVQNVKI 113
Query: 200 VTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGV-LCSTRPMRIGPAATKKAATGQQYQKA 258
+ D+ R YGFV + D R+M +NG + + P +K+ YQ
Sbjct: 114 IPDKNA-RGYNYGFVEYDDPGAAERAMQTLNGRRVHQSVPYPDTTRNSKEIRVNWAYQSN 172
Query: 259 TYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI------PAGKRC 312
T + E+ N+ IFVG L V D++L F +G + ++ +
Sbjct: 173 T------TNKEDTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRSRGY 226
Query: 313 GFVQFANR 320
GFV F +R
Sbjct: 227 GFVAFRDR 234
>gi|217074564|gb|ACJ85642.1| unknown [Medicago truncatula]
gi|388521359|gb|AFK48741.1| unknown [Medicago truncatula]
Length = 407
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 149/307 (48%), Gaps = 32/307 (10%)
Query: 29 QSQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEES 88
Q+ + +Q Q+ P + PQ P PS P G P RS+++G++ + E
Sbjct: 2 QNHRLMKQQQSLYHPGLLAPPQIEPIPSGNLPP-GFDPST----CRSVYVGNVHTQVTEP 56
Query: 89 YIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFR 148
+ +F TG K+ R ++++ YGFI + +A + T NG + Q +
Sbjct: 57 LLQEVFAGTGPVEGCKLFRKEKSS----YGFIHYFDRRSAALAILTLNGRHLFG--QPIK 110
Query: 149 LNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRS 208
+NWA Y +G+R +D + IFVGDL+ +VTD L F +VY S A+V+ D+ TGRS
Sbjct: 111 VNWA-YASGQR-EDTSGHYNIFVGDLSPEVTDATLFACF-SVYQSCSDARVMWDQKTGRS 167
Query: 209 KGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQ 264
+G+GFV F + + ++ ++ G +R +R ATK A ++ Q K+ + T
Sbjct: 168 RGFGFVSFRSQQDAQSAINDLTGKWLGSRQIRCN-WATKVAGGIEEKQNSDSKSVVELTN 226
Query: 265 GSQG-----------ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKR 311
GS EN+P TT++VG L T L F G V V++ K
Sbjct: 227 GSSEDGKEISGNDVPENNPQYTTVYVGNLGSEATQLDLHRHFHALGAGVIEEVRVQRDKG 286
Query: 312 CGFVQFA 318
GFV+++
Sbjct: 287 FGFVRYS 293
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 39/197 (19%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
+ G ++++GDL P + ++ + + F +V+ +++T S G+GF+ F S A+
Sbjct: 123 TSGHYNIFVGDLSPEVTDATLFACFSVYQSCSDARVMWDQKTGRSRGFGFVSFRSQQDAQ 182
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYGAG--ERRQ---------------DDGPDF----- 167
+ G + S + R NWAT AG E +Q +DG +
Sbjct: 183 SAINDLTGKWLGSRQ--IRCNWATKVAGGIEEKQNSDSKSVVELTNGSSEDGKEISGNDV 240
Query: 168 --------TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDE 219
T++VG+L ++ T L F A+ GA V+ + R KG+GFVR+
Sbjct: 241 PENNPQYTTVYVGNLGSEATQLDLHRHFHAL-----GAGVIEEVRVQRDKGFGFVRYSTH 295
Query: 220 SEQLRSMTEMNG--VLC 234
+E ++ N LC
Sbjct: 296 AEAALAIQMGNAQSYLC 312
>gi|353238970|emb|CCA70899.1| related to polyadenylate-binding protein [Piriformospora indica DSM
11827]
Length = 944
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 112/221 (50%), Gaps = 45/221 (20%)
Query: 74 RSLWIGDLQPWMEESY---IASIFGHTGEFV-------SGKVIRNKQTNFSEGYGFIEFV 123
++LW+GDL+PWM++ Y + S+FG + + R+ + GY + F
Sbjct: 58 KTLWLGDLEPWMDDHYMLQVCSLFGWETSAIYMPRPPAAPNATRHPN---NAGYCLLIFP 114
Query: 124 SHAAAERVLQTF------NGTQ----MPSTEQNFRLNW--ATYGAGERRQDDGP-----D 166
+H A V++ + N T +P++ + +L+W +T +D GP +
Sbjct: 115 THEKAATVVEQYGLDAMNNSTAQPILLPNSNRPIKLDWLSSTNAKVSIGKDPGPIDNAIE 174
Query: 167 FTIFVGDLAADVTDYVLQETFR---------------AVYSSVKGAKVVTDRTTGRSKGY 211
++IFVGD+AADVT+ L FR A + S AKV+ D TG SKGY
Sbjct: 175 YSIFVGDIAADVTNADLMNVFRNPNLGLRGDFPPRLIAPFLSCCNAKVMVDSVTGISKGY 234
Query: 212 GFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
GFVRF E++Q R++ EM G+ C +RPMR+ A K A G
Sbjct: 235 GFVRFTSEADQKRALLEMQGLYCKSRPMRLSTATAKNKAGG 275
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 120/278 (43%), Gaps = 38/278 (13%)
Query: 75 SLWIGDLQPWMEESYIASIF-----GHTGEF-----------VSGKVIRNKQTNFSEGYG 118
S+++GD+ + + + ++F G G+F + KV+ + T S+GYG
Sbjct: 176 SIFVGDIAADVTNADLMNVFRNPNLGLRGDFPPRLIAPFLSCCNAKVMVDSVTGISKGYG 235
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFV------- 171
F+ F S A +R L G S A AG ++ ++ V
Sbjct: 236 FVRFTSEADQKRALLEMQGLYCKSRPMRLSTATAKNKAGGADEEHQEPMSVVVRVTPATS 295
Query: 172 -GDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM- 229
G L+ D R++ S+V A+ R + R + + + S+ +M +
Sbjct: 296 GGPLSPKSID---PSKIRSITSAV--AEGAASRPSQRGE-FHPMMLAKISQLANTMGQHP 349
Query: 230 ---NGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGE----NDPNNTTIFVGGL 282
GV P + + ++ +A + G+ + +DP NTT+FVGGL
Sbjct: 350 GYRGGVASVLPPPGLSNSQIQQWLHDNPQARAQLETLLGNGNDPLVPSDPQNTTVFVGGL 409
Query: 283 DPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
P ++++ L+T F +G + +VK+P GK CGFVQF +
Sbjct: 410 SPLISEETLRTFFAPFGAIHYVKVPPGKSCGFVQFVKK 447
>gi|66516817|ref|XP_623816.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Apis
mellifera]
gi|380017726|ref|XP_003692798.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Apis
florea]
Length = 295
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 101/179 (56%), Gaps = 14/179 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+P+M ES+I + F GE + KV+RN+ T GY F+ F + A +
Sbjct: 10 LWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMALDAMHK 69
Query: 135 FNGTQMPSTE--QNFRLNWATYGA---GERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
NG +P + FRLN A+ ER +F+I+VGDL+ DV DY L F A
Sbjct: 70 LNGKVIPGSNPAVRFRLNHASTTGKPTAER------EFSIWVGDLSTDVDDYSLYRAFAA 123
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
Y+S++ AKV+ D ++G SKGYGFVRF +E EQ S+ MNG T+ ++I A +
Sbjct: 124 KYNSIRTAKVILD-SSGFSKGYGFVRFANEEEQKNSLVTMNGYRGLGTKSLKICNAVPR 181
>gi|126273035|ref|XP_001367894.1| PREDICTED: nucleolysin TIAR isoform 2 [Monodelphis domestica]
Length = 371
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 127/246 (51%), Gaps = 7/246 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I +N + Y F+EF H A L
Sbjct: 8 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALA 65
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 66 AMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAF-APFGK 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ M G R +R A K A
Sbjct: 122 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 181
Query: 254 QYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+ +T Q + ++ P N T++ GG+ +TD +++ F +G+++ +++ K
Sbjct: 182 TQENSTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGY 241
Query: 313 GFVQFA 318
FV+F+
Sbjct: 242 SFVRFS 247
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 26/166 (15%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ T+ + Y FV F +
Sbjct: 2 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEHTS--NDPYCFVEFYEHR 58
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
+ ++ MNG + G++ K + T SQ ++ N+ +FVG
Sbjct: 59 DAAAALAAMNG----------------RKILGKEV-KVNWATTPSSQKKDTSNHFHVFVG 101
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANR 320
L P +T + +K+ F +G++ ++ K GFV F N+
Sbjct: 102 DLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNK 147
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 98 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 157
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDG---------------PDFTIFVGDLAADV 178
G + + R NWAT A + Q++ + T++ G +A+ +
Sbjct: 158 GGQWLGGRQ--IRTNWATRKPPAPKSTQENSTKQLRFEDVVNQSSPKNCTVYCGGIASGL 215
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 216 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 261
>gi|254567738|ref|XP_002490979.1| Poly(A) binding protein, part of the 3'-end RNA-processing complex,
mediates interactions between th [Komagataella pastoris
GS115]
gi|238030776|emb|CAY68699.1| Poly(A) binding protein, part of the 3'-end RNA-processing complex,
mediates interactions between th [Komagataella pastoris
GS115]
gi|328352488|emb|CCA38887.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Komagataella pastoris CBS 7435]
Length = 626
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 125/255 (49%), Gaps = 25/255 (9%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
+S+ + SL++G+L P + ES + F G S +V R+ T S GYG++ F S AA
Sbjct: 47 ASETLASLYVGELDPTVTESDLYEFFSPIGSVNSIRVCRDAVTKRSLGYGYVNFHSQAAG 106
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
ER L+ N ++ RL W+ RR G IF+ +L + + L +TF
Sbjct: 107 ERALEELNYAEIKGVR--CRLMWSQRDPSLRRSGSG---NIFIKNLDPAIENKTLHDTFS 161
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ + V KV TD G SKG+GFV + + ++ +NG+L + R + +GP KK
Sbjct: 162 S-FGKVLSCKVATDE-NGNSKGFGFVHYESDEAAQAAIENINGMLLNGREIYVGPHLAKK 219
Query: 249 AATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL--VHVKI 306
+++ +Q E N T +FV D T+D L+ +F YG + +H+++
Sbjct: 220 D------RESRFQ-------EMIKNYTNVFVKNFDTESTEDELRELFESYGPITSIHLQV 266
Query: 307 PA---GKRCGFVQFA 318
+ K GFV FA
Sbjct: 267 DSEGHNKGFGFVNFA 281
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 117/256 (45%), Gaps = 16/256 (6%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L P +E + F G+ +S KV ++ N S+G+GF+ + S
Sbjct: 132 PSLRRSGSGNIFIKNLDPAIENKTLHDTFSSFGKVLSCKVATDENGN-SKGFGFVHYESD 190
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQ 184
AA+ ++ NG + E + A R Q+ ++T +FV + + T+ L+
Sbjct: 191 EAAQAAIENINGMLLNGREIYVGPHLAKKDRESRFQEMIKNYTNVFVKNFDTESTEDELR 250
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
E F + Y + + D + G +KG+GFV F + + ++++ +N +P+ +G A
Sbjct: 251 ELFES-YGPITSIHLQVD-SEGHNKGFGFVNFAEHDDAVKAVEALNDKEYKGKPLYVGRA 308
Query: 245 ATKKAATGQ---QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
K + +Y+ + Q Q N +F+ LD S+ D L+ F +G +
Sbjct: 309 QKKNERVHELTKKYEADRLEKLQKYQSVN------LFIKNLDESIDDARLEEEFKPFGTI 362
Query: 302 VHVKI---PAGKRCGF 314
K+ GK GF
Sbjct: 363 TSAKVMLDENGKSRGF 378
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 84/183 (45%), Gaps = 18/183 (9%)
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMP--------STEQNFRLNWATYGAGERRQDDGP 165
++G+GF+ F H A + ++ N + + ++N R++ T R +
Sbjct: 272 NKGFGFVNFAEHDDAVKAVEALNDKEYKGKPLYVGRAQKKNERVHELTKKYEADRLEKLQ 331
Query: 166 DF---TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
+ +F+ +L + D L+E F+ + ++ AKV+ D G+S+G+GFV E
Sbjct: 332 KYQSVNLFIKNLDESIDDARLEEEFKP-FGTITSAKVMLDEN-GKSRGFGFVCLSTPEEA 389
Query: 223 LRSMTEMNGVLCSTRPMRIG---PAATKKAATGQQYQKATYQNTQGSQGENDPNNTT--I 277
++++EMN + + +P+ + P A +++ QQ Q Q G PN I
Sbjct: 390 TKAISEMNQRMVANKPLYVALAQPKAIRRSQLAQQIQARNQMRMQQQAGPGIPNQFVQPI 449
Query: 278 FVG 280
F G
Sbjct: 450 FYG 452
>gi|340728040|ref|XP_003402340.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Bombus
terrestris]
gi|350417670|ref|XP_003491536.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Bombus
impatiens]
Length = 295
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 100/176 (56%), Gaps = 8/176 (4%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+P+M ES+I + F GE + KV+RN+ T GY F+ F + A +
Sbjct: 10 LWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMALDAMHK 69
Query: 135 FNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG +P + FRLN A+ + + F+I+VGDL+ DV DY L F A Y+
Sbjct: 70 LNGKVIPGSNPAVRFRLNHASTTGKPTTERE---FSIWVGDLSTDVDDYSLYRAFAAKYN 126
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
S++ AKV+ D ++G SKGYGFVRF +E EQ S+ MNG T+ ++I A +
Sbjct: 127 SIRTAKVILD-SSGFSKGYGFVRFANEEEQKNSLVTMNGYRGLGTKSLKICNAVPR 181
>gi|322792679|gb|EFZ16553.1| hypothetical protein SINV_16123 [Solenopsis invicta]
Length = 306
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 100/176 (56%), Gaps = 8/176 (4%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+P+M ES+I + F GE + KV+RN+ T GY F+ F + A +
Sbjct: 21 LWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMALDAMHK 80
Query: 135 FNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG +P + FRLN A+ + + F+I+VGDL+ DV DY L F A Y+
Sbjct: 81 LNGKVIPGSNPPVRFRLNHASTTGKPTTERE---FSIWVGDLSTDVDDYSLYRAFAAKYN 137
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
S++ AKV+ D ++G SKGYGFVRF +E EQ S+ MNG T+ ++I A +
Sbjct: 138 SIRTAKVILD-SSGFSKGYGFVRFANEEEQKNSLITMNGYRGLGTKSLKICNAVPR 192
>gi|148909819|gb|ABR17996.1| unknown [Picea sitchensis]
Length = 490
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 143/303 (47%), Gaps = 49/303 (16%)
Query: 55 PSQQTQPY---GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQT 111
P Q +P + P S RS+++G++ + E +A +FG G K+I+ +++
Sbjct: 57 PLSQIEPIPSGNLPPGFDSSACRSVYVGNISVHVTEGLLAEVFGAVGPLEGCKLIKKEKS 116
Query: 112 NFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFV 171
+ YGF+++ H +A + NG Q+ Q ++NWA Y +G+R G ++IFV
Sbjct: 117 S----YGFVDYYDHRSAANSILHLNGKQI--YGQAIKVNWA-YASGQREDTTG-HYSIFV 168
Query: 172 GDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
GDL+ +VTD L F ++Y S A+V+ D+ +GRS+G+GFV F ++ + ++ +M G
Sbjct: 169 GDLSPEVTDAALFACF-SIYPSCSDARVMWDQKSGRSRGFGFVSFRNQQDADNAINQMTG 227
Query: 232 VLCSTRPMRI--------GPAATKKAATGQQYQKATYQNT-------------------- 263
+RP+R G + K + Q+ NT
Sbjct: 228 KTLGSRPIRCNWATKSSSGNQSDDKQTSEMQFASNASNNTSANGSADHNISAGTTAVGTG 287
Query: 264 -------QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGF 314
Q S EN+P+ TT+++G L VT L F G V V++ K GF
Sbjct: 288 GQQKGGAQTSGPENNPSYTTVYIGNLPHEVTQTELHRQFLALGVGVIEDVRVQRDKGFGF 347
Query: 315 VQF 317
V++
Sbjct: 348 VRY 350
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 84/215 (39%), Gaps = 59/215 (27%)
Query: 72 GIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
G S+++GDL P + ++ + + F +V+ ++++ S G+GF+ F + A+
Sbjct: 162 GHYSIFVGDLSPEVTDAALFACFSIYPSCSDARVMWDQKSGRSRGFGFVSFRNQQDADNA 221
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDD---------------------------- 163
+ G + S + R NWAT + + DD
Sbjct: 222 INQMTGKTLGS--RPIRCNWATKSSSGNQSDDKQTSEMQFASNASNNTSANGSADHNISA 279
Query: 164 ------------------GPD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVV 200
GP+ T+++G+L +VT L F A+ G V+
Sbjct: 280 GTTAVGTGGQQKGGAQTSGPENNPSYTTVYIGNLPHEVTQTELHRQFLAL-----GVGVI 334
Query: 201 TDRTTGRSKGYGFVRFGDESEQLRSMTEMNG-VLC 234
D R KG+GFVR+ E ++ NG V+C
Sbjct: 335 EDVRVQRDKGFGFVRYRSHEEAALAIQLANGRVIC 369
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 29/159 (18%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG+++ VT+ +L E F AV ++G K++ + YGFV + D S+
Sbjct: 80 SVYVGNISVHVTEGLLAEVFGAV-GPLEGCKLIKKEKSS----YGFVDYYDHRSAANSIL 134
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG + +++ A A+GQ+ E+ + +IFVG L P VT
Sbjct: 135 HLNGKQIYGQAIKVNWAY----ASGQR--------------EDTTGHYSIFVGDLSPEVT 176
Query: 288 DDILKTVFGQYGELVHVKIPAGKRC------GFVQFANR 320
D L F Y ++ ++ GFV F N+
Sbjct: 177 DAALFACFSIYPSCSDARVMWDQKSGRSRGFGFVSFRNQ 215
>gi|226528727|ref|NP_001148487.1| mRNA 3-UTR binding protein [Zea mays]
gi|195619730|gb|ACG31695.1| mRNA 3-UTR binding protein [Zea mays]
Length = 447
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 132/284 (46%), Gaps = 32/284 (11%)
Query: 54 PPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF 113
P S P G P RS+++G++ P + ES + +F G K+IR ++++F
Sbjct: 56 PVSNGNLPPGFDPST----CRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSF 111
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGD 173
GF+++ +A + T +G + Q ++NWA A +R+D F IFVGD
Sbjct: 112 ----GFVDYYDRRSAALAIMTLHGRHVYG--QAIKVNWAY--ASTQREDTSGHFHIFVGD 163
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
L+++V D L F A Y S A+V+ D TGRS+GYGFV F ++ E ++ EM G
Sbjct: 164 LSSEVNDATLYACFSA-YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAIAEMTGKW 222
Query: 234 CSTRPMRIGPAATKKA--------------ATGQQYQKATYQNTQGSQGE---NDPNNTT 276
+R +R A + G AT + E N+P+ TT
Sbjct: 223 LGSRQIRCNWATKNNSEEKPETDNHNAVVLTNGSSNNSATDASQDAGSKEPPQNNPDCTT 282
Query: 277 IFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFA 318
++VG L V D L F G + V++ K GFV+++
Sbjct: 283 VYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQDKGFGFVRYS 326
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 79/199 (39%), Gaps = 40/199 (20%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL + ++ + + F +V+ + +T S GYGF+ F + AE +
Sbjct: 159 IFVGDLSSEVNDATLYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAIAEM 218
Query: 136 NGTQMPSTEQNFRLNWATYGAGERR------------------------QDDG------- 164
G + S + R NWAT E + QD G
Sbjct: 219 TGKWLGSRQ--IRCNWATKNNSEEKPETDNHNAVVLTNGSSNNSATDASQDAGSKEPPQN 276
Query: 165 -PDFT-IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
PD T ++VG+L +V L F + G + + + KG+GFVR+ E
Sbjct: 277 NPDCTTVYVGNLGHEVNRDELHRHFYNL-----GVGAIEEVRVQQDKGFGFVRYSTHGEA 331
Query: 223 LRSMTEMNGVLCSTRPMRI 241
++ NG + +P++
Sbjct: 332 ALAIQMSNGSVVRGKPIKC 350
>gi|357610697|gb|EHJ67099.1| TIA-1-related RNA binding protein [Danaus plexippus]
Length = 388
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 134/256 (52%), Gaps = 18/256 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E ++ ++FG GE K+IR ++ Y F+EF +HA+A L
Sbjct: 8 KTLYVGNLDASVTEEFLCALFGQIGEVKGCKIIREPG---NDPYAFLEFTNHASAATALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N E+ ++NWAT + + D IFVGDL+ ++ ++L+E F A +
Sbjct: 65 AMNRRVF--LEKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILREAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK----- 248
+ ++V D T +SKGY FV F +++ ++ MNG +R +R + K
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPTKGP 181
Query: 249 ---AATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSV-TDDILKTVFGQYGELVHV 304
A + ++ ++ T+ ++ P NTT++ GG +V T++++++ F Q+G++ V
Sbjct: 182 NEGAPSSKRVKQPTFDEV---YNQSSPTNTTVYCGGFTSNVITEELMQSTFSQFGQIQDV 238
Query: 305 KIPAGKRCGFVQFANR 320
++ K F++F +
Sbjct: 239 RVFRDKGYAFIRFTTK 254
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 31/176 (17%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + F GE + +++R+ QT S+GY F+ F
Sbjct: 85 GNQPKTDTSNHHHIFVGDLSPEIETHILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 144
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATY---------GAGERRQDDGPDF------ 167
V A AE +Q NG + S ++ R NW+T GA ++ P F
Sbjct: 145 VKKADAEAAIQAMNGQWLGS--RSIRTNWSTRKPPTKGPNEGAPSSKRVKQPTFDEVYNQ 202
Query: 168 ------TIFVGDLAADV-TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRF 216
T++ G ++V T+ ++Q TF + + ++ +V R KGY F+RF
Sbjct: 203 SSPTNTTVYCGGFTSNVITEELMQSTF-SQFGQIQDVRVF------RDKGYAFIRF 251
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 22/146 (15%)
Query: 162 DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
D+ T++VG+L A VT+ L F + VKG K++ R G Y F+ F + +
Sbjct: 3 DESHPKTLYVGNLDASVTEEFLCALFGQI-GEVKGCKII--REPGNDP-YAFLEFTNHAS 58
Query: 222 QLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEND-PNNTTIFVG 280
++ MN + + M++ + + G+Q + D N+ IFVG
Sbjct: 59 AATALAAMNRRVFLEKEMKV-----------------NWATSPGNQPKTDTSNHHHIFVG 101
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKI 306
L P + IL+ F +GE+ + +I
Sbjct: 102 DLSPEIETHILREAFAPFGEISNCRI 127
>gi|449517663|ref|XP_004165864.1| PREDICTED: nucleolysin TIAR-like, partial [Cucumis sativus]
Length = 394
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 137/268 (51%), Gaps = 29/268 (10%)
Query: 67 DASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHA 126
DAS+ RS+++G++ + E + +FG G K++R ++++ YGF+ +
Sbjct: 20 DAST--CRSVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVRKEKSS----YGFVHYFDRR 73
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQET 186
+A + + NG + Q ++NWA A +R+D F IFVGDL+ +VTD +L
Sbjct: 74 SAALAILSLNGRHL--FGQPIKVNWAY--ASSQREDTSGHFNIFVGDLSPEVTDAMLFAC 129
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
F A YSS A+V+ D+ TGRS+G+GFV F ++ E ++ ++ G +R +R AA
Sbjct: 130 FSA-YSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAA- 187
Query: 247 KKAATGQQYQ----KATYQNTQGSQ--GENDPNN---------TTIFVGGLDPSVTDDIL 291
K A + Q K+ + + GS G+ NN TT++VG L P V+ L
Sbjct: 188 KGAGVNEDKQGSDTKSVVELSNGSSEDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDL 247
Query: 292 KTVFGQYGELV--HVKIPAGKRCGFVQF 317
F G V V+I K GFV++
Sbjct: 248 HRHFHSLGAGVIEEVRIQRDKGFGFVRY 275
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 39/212 (18%)
Query: 55 PSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFS 114
P + Y + + G ++++GDL P + ++ + + F +V+ +++T S
Sbjct: 91 PIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRS 150
Query: 115 EGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAG----------------- 157
G+GF+ F + A+ + G + S + R NWA GAG
Sbjct: 151 RGFGFVSFRNQQEAQNAINDLTGKWLGSRQ--IRCNWAAKGAGVNEDKQGSDTKSVVELS 208
Query: 158 --------ERRQDDGPD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRT 204
E +D P+ T++VG+LA +V+ L F ++ GA V+ +
Sbjct: 209 NGSSEDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSL-----GAGVIEEVR 263
Query: 205 TGRSKGYGFVRFGDESEQLRS--MTEMNGVLC 234
R KG+GFVR+ +E + M LC
Sbjct: 264 IQRDKGFGFVRYNTHAEAALAIQMGNTRSFLC 295
>gi|449550716|gb|EMD41680.1| hypothetical protein CERSUDRAFT_110250 [Ceriporiopsis subvermispora
B]
Length = 448
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 131/266 (49%), Gaps = 30/266 (11%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERVL 132
L++G+L P + E + IF G K+I ++ N+ G YGF+E++ AAE L
Sbjct: 16 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYMDMRAAETAL 73
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT NG ++ TE R+NWA Y + ++D F +FVGDL+ +V D VL + F A +
Sbjct: 74 QTLNGRKIFDTE--IRVNWA-YQGQQNKEDTSNHFHVFVGDLSPEVNDEVLAKAFSA-FG 129
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA-- 250
++ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +R +R+ A K
Sbjct: 130 TLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAP 189
Query: 251 -TGQQYQKATYQNTQGSQGENDPN------------------NTTIFVGGLDPSVTDDIL 291
G + + + G N NTT++VG L P T L
Sbjct: 190 PVGVRSGSMSAGSGGGGGAPAPMNFSGGPLSYESVVQQTPAYNTTVYVGNLVPYCTQADL 249
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQF 317
+F G L +++ A + FV+
Sbjct: 250 IPLFQSIGYLSEIRMQADRGFAFVKL 275
>gi|302409198|ref|XP_003002433.1| nucleolysin TIA-1 [Verticillium albo-atrum VaMs.102]
gi|261358466|gb|EEY20894.1| nucleolysin TIA-1 [Verticillium albo-atrum VaMs.102]
Length = 443
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 126/263 (47%), Gaps = 25/263 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L+IG L + E + IF TG + K+I +K YGF+E+ AA R +Q
Sbjct: 52 RALYIGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNQK-GYNYGFVEYDDPGAAARAMQ 110
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ R+NWA ++D F IFVGDL+ +V D +L + F A + S
Sbjct: 111 TLNGRRV----HEIRVNWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDEILSQAF-AAFGS 165
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK--KAAT 251
V A+V+ D TGRS+GYGFV F D + ++++ M+G +R +R A K +
Sbjct: 166 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 225
Query: 252 GQQYQKATYQNTQGSQGEND----------------PN-NTTIFVGGLDPSVTDDILKTV 294
QQ +A G + PN TT++VG L P T + + +
Sbjct: 226 QQQAMQAMGMTPTTPFGHHQFPAHGMASYEVILAQTPNWQTTVYVGNLTPYTTPNDVVPL 285
Query: 295 FGQYGELVHVKIPAGKRCGFVQF 317
F +G +V + A + F++
Sbjct: 286 FQNFGFVVESRFQADRGFAFIKM 308
>gi|365985359|ref|XP_003669512.1| hypothetical protein NDAI_0C06100 [Naumovozyma dairenensis CBS 421]
gi|343768280|emb|CCD24269.1| hypothetical protein NDAI_0C06100 [Naumovozyma dairenensis CBS 421]
Length = 585
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 125/250 (50%), Gaps = 25/250 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + E+ + IF G S +V R+ T S GY ++ F H A ++ ++
Sbjct: 41 SLYVGDLDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGKKAIEK 100
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ W+ R++ IF+ +L +D+ + L +TF +V+ ++
Sbjct: 101 LNYT--PIKGRLCRIMWSQRDPALRKKGSA---NIFIKNLHSDIDNKALYDTF-SVFGNI 154
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
+K+ TD TG+SKG+GFV F D++ ++ +NG+L + + + +GP ++K Q
Sbjct: 155 LSSKIATDE-TGKSKGFGFVHFEDDTAAKEAIDALNGMLLNGQEIFVGPHLSRKERDSQ- 212
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAG----- 309
E+ N T I+V ++ TD+ +F +YG+++ +
Sbjct: 213 ------------LEESKANFTNIYVKNINLETTDEEFTELFSKYGKVLSAALEKTEDGKL 260
Query: 310 KRCGFVQFAN 319
K GFV F N
Sbjct: 261 KGFGFVDFEN 270
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 113/256 (44%), Gaps = 16/256 (6%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S K+ + +T S+G+GF+ F
Sbjct: 120 PALRKKGSANIFIKNLHSDIDNKALYDTFSVFGNILSSKIATD-ETGKSKGFGFVHFEDD 178
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQ 184
AA+ + NG + E + + + ++ +FT I+V ++ + TD
Sbjct: 179 TAAKEAIDALNGMLLNGQEIFVGPHLSRKERDSQLEESKANFTNIYVKNINLETTDEEFT 238
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
E F + Y V A + G+ KG+GFV F + + +++ E+NG + + + A
Sbjct: 239 ELF-SKYGKVLSA-ALEKTEDGKLKGFGFVDFENHEDAAKAVEELNGSQFKDQELFVSRA 296
Query: 245 ATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
K +QY+ + + QG N +F+ LD S+ D+ LK F YG +
Sbjct: 297 QKKYERMQELKKQYEASRLEKMAKYQGVN------LFIKNLDDSIDDEKLKEEFAPYGNI 350
Query: 302 VHVKI---PAGKRCGF 314
V++ GK GF
Sbjct: 351 TSVRVMRTENGKSRGF 366
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 67 DASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHA 126
+ S ++++ ++ + +F G+ +S + + + +G+GF++F +H
Sbjct: 214 EESKANFTNIYVKNINLETTDEEFTELFSKYGKVLSAALEKTEDGKL-KGFGFVDFENHE 272
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDF--------------TIFVG 172
A + ++ NG+Q E Y ER Q+ + +F+
Sbjct: 273 DAAKAVEELNGSQFKDQELFVSRAQKKY---ERMQELKKQYEASRLEKMAKYQGVNLFIK 329
Query: 173 DLAADVTDYVLQETFRAVYSSVKGAKVVTDRT-TGRSKGYGFVRFGDESEQLRSMTEMNG 231
+L + D L+E F A Y ++ +V+ RT G+S+G+GFV F E +++TE N
Sbjct: 330 NLDDSIDDEKLKEEF-APYGNITSVRVM--RTENGKSRGFGFVCFSTPEEATKAITEKNQ 386
Query: 232 VLCSTRPMRIGPAATKKAATGQQYQKATYQN 262
+ + +P+ + A K Q Q+ +N
Sbjct: 387 QIVAGKPLYVAIAQRKDVRRSQLAQQIQARN 417
>gi|58266842|ref|XP_570577.1| mRNA catabolism, nonsense-mediated-related protein [Cryptococcus
neoformans var. neoformans JEC21]
gi|134110468|ref|XP_776061.1| hypothetical protein CNBD1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258729|gb|EAL21414.1| hypothetical protein CNBD1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226810|gb|AAW43270.1| mRNA catabolism, nonsense-mediated-related protein, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 434
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 111/191 (58%), Gaps = 11/191 (5%)
Query: 62 YGVAPDASSDGIR--SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG--- 116
YG+ P S++ + L++G+L P + + + IF G VS K+I+++ NF G
Sbjct: 8 YGITPGQSAEAPKRPHLYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDR--NFQHGGFN 65
Query: 117 YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
YGF+E+ +A++ L T NG ++ E R+NWA Y + ++D + +FVGDL+
Sbjct: 66 YGFVEYADMRSADQALTTLNGRKIFDAE--IRVNWA-YQGNQNKEDTQHHYHVFVGDLSP 122
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+V D VL + F A + S+ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +
Sbjct: 123 EVNDDVLSKAFGA-FGSLSEARVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLGS 181
Query: 237 RPMRIGPAATK 247
R +R+ A K
Sbjct: 182 RAIRVNWANQK 192
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 25/159 (15%)
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSK-GYGFVRFGDESEQLRSMT 227
++VG+L+ VTDY+L E F AV V AK++ DR YGFV + D +++T
Sbjct: 24 LYVGNLSPRVTDYILTEIF-AVAGPVVSAKIIQDRNFQHGGFNYGFVEYADMRSADQALT 82
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG +R+ A YQ Q E+ ++ +FVG L P V
Sbjct: 83 TLNGRKIFDAEIRVNWA---------------YQGNQNK--EDTQHHYHVFVGDLSPEVN 125
Query: 288 DDILKTVFGQYGELVHVKI----PAGKR--CGFVQFANR 320
DD+L FG +G L ++ +GK GF+ F ++
Sbjct: 126 DDVLSKAFGAFGSLSEARVMWDMNSGKSRGYGFLSFRDK 164
>gi|297725721|ref|NP_001175224.1| Os07g0516900 [Oryza sativa Japonica Group]
gi|255677810|dbj|BAH93952.1| Os07g0516900, partial [Oryza sativa Japonica Group]
Length = 92
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 64/81 (79%)
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
LA+DVTD +L+E F+ Y SV+GAKVV D+ TGRSKGYGFVRFGDE+EQ R+MTEMNG
Sbjct: 1 LASDVTDSMLEEAFKTSYPSVRGAKVVFDKVTGRSKGYGFVRFGDENEQTRAMTEMNGAT 60
Query: 234 CSTRPMRIGPAATKKAATGQQ 254
STR MR+GPAA KK QQ
Sbjct: 61 LSTRQMRLGPAANKKNMGTQQ 81
>gi|50304975|ref|XP_452445.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641578|emb|CAH01296.1| KLLA0C05522p [Kluyveromyces lactis]
Length = 540
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 114/235 (48%), Gaps = 49/235 (20%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNK------------------ 109
+S++ R+LW+GDL P +E IASI+ G+ V K+I++K
Sbjct: 14 SSNELPRTLWMGDLDPGFDELIIASIWQSLGKSVKVKLIKSKTNALVPINSTSIPNNASS 73
Query: 110 --------------QTNFSE-GYGFIEFVSHAAAERVLQTFNGTQMPSTEQN-------- 146
+TN GY F+EF S A++ L T N T +P+ N
Sbjct: 74 NALEINGVSFIDPNKTNLHHAGYCFVEFESFEDAQQAL-TLNATPIPNISCNTTASKRTN 132
Query: 147 ------FRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVV 200
FRLNWA P+F++FVGDL+ T+ L F+ Y+SVK +V+
Sbjct: 133 DDGKRKFRLNWANGATLHSTILPTPEFSLFVGDLSPFATEADLLSLFQTKYNSVKTVRVM 192
Query: 201 TDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQY 255
TD TG S+ +GFVRF +E+E+ ++ EMNGV R +R+ AT + QQ+
Sbjct: 193 TDPITGASRCFGFVRFANETERRNALIEMNGVQFQGRQLRVA-YATPRNNVAQQH 246
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 33/46 (71%)
Query: 275 TTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
TT+FVGGL+P++ + L +F +G + VKIP GK+CGFV++ R
Sbjct: 445 TTVFVGGLNPNINELQLFELFKPFGTITDVKIPPGKQCGFVKYNER 490
>gi|260942869|ref|XP_002615733.1| hypothetical protein CLUG_04615 [Clavispora lusitaniae ATCC 42720]
gi|238851023|gb|EEQ40487.1| hypothetical protein CLUG_04615 [Clavispora lusitaniae ATCC 42720]
Length = 462
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 129/263 (49%), Gaps = 35/263 (13%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+GDL P E+ IA ++ GE + K+IR+K Y F+ F S A +
Sbjct: 80 LWMGDLDPQWTEASIADLWKQMGEEPTAVKIIRDKMG--KSQYCFVTFPSSNAVASAISK 137
Query: 135 FNGTQMPSTEQNFRLNWATYG--AGERRQDDGP-----------------DFTIFVGDLA 175
Q+P + + F+LNWA+ G+ R + GP +++IFVGDLA
Sbjct: 138 HRA-QVPGSSRFFKLNWASGSNPGGDARSNAGPGNRLSNASGSRLSKPQQEYSIFVGDLA 196
Query: 176 ADVTDYVLQETFRAVYSS-VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLC 234
+DV++ +L F Y VK K++TD TG +KG+GFVRF Q ++ + ++
Sbjct: 197 SDVSESLLYTHFDKEYPGLVKQVKIMTDPHTGANKGFGFVRFVSPEAQQAALQDNKSIVI 256
Query: 235 STRPMRIGPA---------ATKKAATGQQYQKATYQNTQ--GSQGENDPNNTTIFVGGLD 283
+ R +R+G A A KK +T Q + + Q DPNN+ I + G+
Sbjct: 257 NQRKVRVGQANGGNQDASSALKKTSTEQPIPTTSNLSQQQPALSPSTDPNNSVICLHGIT 316
Query: 284 PSVTDDILKTVFGQYGELVHVKI 306
S+TDD L F +G +++ ++
Sbjct: 317 SSITDDDLLAHFLPFGHIIYCRL 339
>gi|451997861|gb|EMD90326.1| hypothetical protein COCHEDRAFT_1106708 [Cochliobolus
heterostrophus C5]
Length = 455
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 128/269 (47%), Gaps = 28/269 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF----SEG--YGFIEFVSHAA 127
R+L++G L P + E + IF TG S K+I +K + S+G YGF+E+ A
Sbjct: 52 RALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPSFNSKGFNYGFVEYDDPGA 111
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
AER + T NG ++ + E R+NWA ++D F IFVGDL+ +V D VL + F
Sbjct: 112 AERGMATLNGRRIHNNE--IRVNWAYQSNNTAKEDTSNHFHIFVGDLSNEVNDEVLLQAF 169
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
+ + V A+V+ D TGRS+GYGFV F D ++ R++ M+G +R +R A K
Sbjct: 170 -STFGPVSEARVMWDMKTGRSRGYGFVAFRDRADAERALNSMDGEWLGSRAIRCNWANQK 228
Query: 248 KAATGQQYQKATYQN-------------TQGSQGEN-----DPN-NTTIFVGGLDPSVTD 288
+ Q Q T G Q + P TT +VG L P +
Sbjct: 229 GQPSISQQQAMASMGMTPTTPFGHHHFPTHGVQSYDMVVAQTPQWQTTCYVGNLTPYTSQ 288
Query: 289 DILKTVFGQYGELVHVKIPAGKRCGFVQF 317
L +F +G + + + + F++
Sbjct: 289 ADLVPLFQNFGYVTETRFQSDRGFAFIKM 317
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
+PN ++VGGLDP VT+D+L+ +F G + VKI
Sbjct: 48 EPNKRALYVGGLDPRVTEDVLRQIFETTGHVQSVKI 83
>gi|356499763|ref|XP_003518706.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 646
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 128/250 (51%), Gaps = 27/250 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + ++ + +F G+ VS +V R+ + S GYG++ F + A R L
Sbjct: 29 SLYVGDLDPNVTDAQLYDLFNQLGQVVSVRVCRDLTSRRSLGYGYVNFSNPQDAARALDV 88
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ ++ R+ G IF+ +L + L +TF + + ++
Sbjct: 89 LNFT--PLNNRPIRIMYSHRDPSIRKSGQG---NIFIKNLDRAIDHKALHDTF-STFGNI 142
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV TD ++G+SKGYGFV+F +E +++ ++NG+L + + + +GP +K
Sbjct: 143 LSCKVATD-SSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGP-FLRKQEREST 200
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL---VHVKIPAGK- 310
KA + N +FV L S TDD LK VFG++G + V ++ GK
Sbjct: 201 ADKAKFNN--------------VFVKNLSESTTDDELKNVFGEFGTITSAVVMRDGDGKS 246
Query: 311 RC-GFVQFAN 319
+C GFV F N
Sbjct: 247 KCFGFVNFEN 256
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 121/261 (46%), Gaps = 18/261 (6%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S KV + S+GYGF++F +
Sbjct: 108 PSIRKSGQGNIFIKNLDRAIDHKALHDTFSTFGNILSCKVATDSSGQ-SKGYGFVQFDNE 166
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
+A++ ++ NG + + +Q + + E D +FV +L+ TD L+
Sbjct: 167 ESAQKAIEKLNGMLL-NDKQVYVGPFLRKQERESTADKAKFNNVFVKNLSESTTDDELKN 225
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F + ++ A V+ D G+SK +GFV F + + R++ +NG + +G A
Sbjct: 226 VF-GEFGTITSAVVMRD-GDGKSKCFGFVNFENADDAARAVEALNGKKFDDKEWYVGKAQ 283
Query: 246 TK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
K + Q+++++ + QG N ++V LD S+ DD LK +F +G +
Sbjct: 284 KKSERENELKQRFEQSMKEAADKYQGAN------LYVKNLDDSLGDDKLKELFSPFGTIT 337
Query: 303 HVKI---PAG--KRCGFVQFA 318
K+ P G + GFV F+
Sbjct: 338 SCKVMRDPNGISRGSGFVAFS 358
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 84/185 (45%), Gaps = 14/185 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L + + ++FG G S V+R+ S+ +GF+ F + A R ++
Sbjct: 208 NVFVKNLSESTTDDELKNVFGEFGTITSAVVMRDGDGK-SKCFGFVNFENADDAARAVEA 266
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG + +E+ L + + D ++V +L + D L
Sbjct: 267 LNGKKFDDKEWYVGKAQKKSERENELKQRFEQSMKEAADKYQGANLYVKNLDDSLGDDKL 326
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+E F + + ++ KV+ D G S+G GFV F E R++ EMNG + ++P+ +
Sbjct: 327 KELF-SPFGTITSCKVMRD-PNGISRGSGFVAFSTPDEASRALLEMNGKMVVSKPLYVTL 384
Query: 244 AATKK 248
A K+
Sbjct: 385 AQRKE 389
>gi|302904116|ref|XP_003049006.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729940|gb|EEU43293.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 474
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 125/263 (47%), Gaps = 23/263 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G L + E + IF TG + K+I +K YGF+E+ AAER +Q
Sbjct: 84 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAR-GYNYGFVEYDDPGAAERAMQ 142
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A + S
Sbjct: 143 TLNGRRVHQSE--IRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 199
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG- 252
V A+V+ D TGRS+GYGFV F D + ++++ M+G +R +R A K +
Sbjct: 200 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSMA 259
Query: 253 ------------------QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTV 294
Q+ + + + TT +VG L P T + + +
Sbjct: 260 QQQAMQAMGMTPTTPYGHHQFPAHGVASYEVILTQTPSWQTTCYVGNLTPYTTPNDVVPL 319
Query: 295 FGQYGELVHVKIPAGKRCGFVQF 317
F +G +V + A + F++
Sbjct: 320 FQNFGFVVESRFQADRGFAFIKM 342
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 74/175 (42%), Gaps = 25/175 (14%)
Query: 153 TYGAGERRQDDGPD-FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGY 211
T G RR P+ ++VG L VT+ VL++ F V+ K++ D+ R Y
Sbjct: 69 TSAGGFRRAAPEPNKRALYVGGLDQRVTEDVLRQIFETT-GHVQNVKIIPDKNA-RGYNY 126
Query: 212 GFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEND 271
GFV + D R+M +NG +R+ A YQ T S E+
Sbjct: 127 GFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWA----------YQSNT------SNKEDT 170
Query: 272 PNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI------PAGKRCGFVQFANR 320
N+ IFVG L V D++L F +G + ++ + GFV F +R
Sbjct: 171 SNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDR 225
>gi|118918389|ref|NP_001036895.2| TIA1 cytotoxic granule-associated RNA binding protein [Bombyx mori]
gi|111608113|gb|ABH10800.1| nucleolysin TIAR protein [Bombyx mori]
Length = 402
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 129/253 (50%), Gaps = 12/253 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L P + E ++ ++FG G+ K+IR ++ Y F+EF H AA L
Sbjct: 8 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPG---NDPYAFLEFTCHTAAATALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N + ++ ++NWAT + + D IFVGDL+ ++ +L+E F A +
Sbjct: 65 AMNKRVV--LDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ ++V D T +SKGY FV F +++ ++ MNG +R +R + K A G
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGV 181
Query: 254 Q-----YQKATYQNTQGSQGENDPNNTTIFVGGLDPS-VTDDILKTVFGQYGELVHVKIP 307
++A ++ P NTT++ GG + +T+++++ F Q+G++ +++
Sbjct: 182 NEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVF 241
Query: 308 AGKRCGFVQFANR 320
K F++F +
Sbjct: 242 RDKGYAFIRFTTK 254
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 31/176 (17%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + + F GE + +++R+ QT S+GY F+ F
Sbjct: 85 GNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 144
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATY---------GAGERRQDDGPDF------ 167
V A AE +Q NG + S ++ R NW+T GA ++ P F
Sbjct: 145 VKKADAEAAIQAMNGQWLGS--RSIRTNWSTRKPPAKGVNEGAPSSKRAKQPTFDEVYNQ 202
Query: 168 ------TIFVGDLAAD-VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRF 216
T++ G ++ +T+ ++Q TF + + ++ +V R KGY F+RF
Sbjct: 203 SSPTNTTVYCGGFTSNIITEELMQNTF-SQFGQIQDIRVF------RDKGYAFIRF 251
>gi|410900504|ref|XP_003963736.1| PREDICTED: nucleolysin TIAR-like isoform 1 [Takifugu rubripes]
Length = 386
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 132/253 (52%), Gaps = 17/253 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E I +F G S K+I + + S+ Y F+EFV H A
Sbjct: 10 KTLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDHTS--SDPYCFVEFVDHKDAASARA 67
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T N ++ E ++NWAT + +++ D F +FVGDL+ D+T ++ F A +
Sbjct: 68 TMNKRKILGKE--VKVNWATSPSCQKK-DTSNHFHVFVGDLSPDITTEDIRAAF-APFGH 123
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA--- 250
+ A+V+ D TG+SKGYGFV F ++ + ++++M G R +R A K A
Sbjct: 124 ISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAGQWLQGRQIRTNWATRKPPAPKS 183
Query: 251 ---TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP 307
G ++ K TQ S P+N T++ GG+ +T+ +++ F +G+++ +++
Sbjct: 184 FQDNGSKHLKFDDIVTQSS-----PHNCTVYCGGIQSGLTEHLMQQTFSPFGQIMEIRVF 238
Query: 308 AGKRCGFVQFANR 320
K FV+F++
Sbjct: 239 PDKGYSFVRFSSH 251
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 26/175 (14%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +
Sbjct: 100 VFVGDLSPDITTEDIRAAFAPFGHISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKM 159
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDGP---------------DFTIFVGDLAADV 178
G + + R NWAT A + QD+G + T++ G + + +
Sbjct: 160 AGQWLQGRQ--IRTNWATRKPPAPKSFQDNGSKHLKFDDIVTQSSPHNCTVYCGGIQSGL 217
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
T++++Q+TF + + + +V D KGY FVRF ++ +NG +
Sbjct: 218 TEHLMQQTF-SPFGQIMEIRVFPD------KGYSFVRFSSHDSAAHAIVSVNGTV 265
>gi|259648117|dbj|BAI40366.1| TIA-1 homologue [Bombyx mori]
Length = 402
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 129/253 (50%), Gaps = 12/253 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L P + E ++ ++FG G+ K+IR ++ Y F+EF H AA L
Sbjct: 8 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPG---NDPYAFLEFTCHTAAATALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N + ++ ++NWAT + + D IFVGDL+ ++ +L+E F A +
Sbjct: 65 AMNKRVV--LDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ ++V D T +SKGY FV F +++ ++ MNG +R +R + K A G
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGV 181
Query: 254 Q-----YQKATYQNTQGSQGENDPNNTTIFVGGLDPS-VTDDILKTVFGQYGELVHVKIP 307
++A ++ P NTT++ GG + +T+++++ F Q+G++ +++
Sbjct: 182 NEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVF 241
Query: 308 AGKRCGFVQFANR 320
K F++F +
Sbjct: 242 RDKGYAFIRFTTK 254
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 31/176 (17%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + + F GE + +++R+ QT S+GY F+ F
Sbjct: 85 GNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 144
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATY---------GAGERRQDDGPDF------ 167
V A AE +Q NG + S ++ R NW+T GA ++ P F
Sbjct: 145 VKKADAEAAIQAMNGQWLGS--RSIRTNWSTRKPPAKGVNEGAPSSKRAKQPTFDEVYNQ 202
Query: 168 ------TIFVGDLAAD-VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRF 216
T++ G ++ +T+ ++Q TF + + ++ +V R KGY F+RF
Sbjct: 203 SSPTNTTVYCGGFTSNIITEELMQNTF-SQFGQIQDIRVF------RDKGYAFIRF 251
>gi|4507499|ref|NP_003243.1| nucleolysin TIAR isoform 1 [Homo sapiens]
gi|194205608|ref|XP_001492932.2| PREDICTED: nucleolysin TIAR isoform 2 [Equus caballus]
gi|311271909|ref|XP_001928970.2| PREDICTED: nucleolysin TIAR isoform 1 [Sus scrofa]
gi|332835148|ref|XP_001154534.2| PREDICTED: nucleolysin TIAR isoform 2 [Pan troglodytes]
gi|345792875|ref|XP_865423.2| PREDICTED: nucleolysin TIAR isoform 18 [Canis lupus familiaris]
gi|390473245|ref|XP_002756491.2| PREDICTED: nucleolysin TIAR isoform 1 [Callithrix jacchus]
gi|395827975|ref|XP_003787163.1| PREDICTED: nucleolysin TIAR isoform 2 [Otolemur garnettii]
gi|397510637|ref|XP_003825699.1| PREDICTED: nucleolysin TIAR isoform 1 [Pan paniscus]
gi|402881650|ref|XP_003904379.1| PREDICTED: nucleolysin TIAR isoform 1 [Papio anubis]
gi|403259379|ref|XP_003922194.1| PREDICTED: nucleolysin TIAR [Saimiri boliviensis boliviensis]
gi|426253184|ref|XP_004020280.1| PREDICTED: nucleolysin TIAR isoform 1 [Ovis aries]
gi|426366372|ref|XP_004050232.1| PREDICTED: nucleolysin TIAR isoform 1 [Gorilla gorilla gorilla]
gi|267131|sp|Q01085.1|TIAR_HUMAN RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-related protein
gi|189310|gb|AAA36384.1| nucleolysin TIAR [Homo sapiens]
gi|158254826|dbj|BAF83384.1| unnamed protein product [Homo sapiens]
gi|261858270|dbj|BAI45657.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[synthetic construct]
gi|380783711|gb|AFE63731.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|383408329|gb|AFH27378.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|384942770|gb|AFI34990.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|410218474|gb|JAA06456.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410257382|gb|JAA16658.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410296996|gb|JAA27098.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
Length = 375
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 126/246 (51%), Gaps = 7/246 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I +N + Y F+EF H A L
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALA 66
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 67 AMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAF-APFGK 122
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ M G R +R A K A
Sbjct: 123 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 182
Query: 254 QYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+ T Q + ++ P N T++ GG+ +TD +++ F +G+++ +++ K
Sbjct: 183 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGY 242
Query: 313 GFVQFA 318
FV+F+
Sbjct: 243 SFVRFS 248
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 26/166 (15%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ T+ + Y FV F +
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEHTS--NDPYCFVEFYEHR 59
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
+ ++ MNG + G++ K + T SQ ++ N+ +FVG
Sbjct: 60 DAAAALAAMNG----------------RKILGKEV-KVNWATTPSSQKKDTSNHFHVFVG 102
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANR 320
L P +T + +K+ F +G++ ++ K GFV F N+
Sbjct: 103 DLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNK 148
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 99 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 158
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDG---------------PDFTIFVGDLAADV 178
G + + R NWAT A + Q++ + T++ G +A+ +
Sbjct: 159 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 216
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 217 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 262
>gi|68472181|ref|XP_719886.1| hypothetical protein CaO19.6790 [Candida albicans SC5314]
gi|68472416|ref|XP_719769.1| hypothetical protein CaO19.14082 [Candida albicans SC5314]
gi|46441601|gb|EAL00897.1| hypothetical protein CaO19.14082 [Candida albicans SC5314]
gi|46441727|gb|EAL01022.1| hypothetical protein CaO19.6790 [Candida albicans SC5314]
Length = 887
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 121/232 (52%), Gaps = 34/232 (14%)
Query: 51 PVPPPSQQTQPYGVAPDASS-------DGIRSLWIGDLQPWMEESYIASIF-GHTGEFVS 102
P PP S Q Q +A D S + R+LW+GDL PW++E+ I ++ + V
Sbjct: 109 PNPPISTQ-QSTAIAADQESISGSELDNKPRTLWMGDLDPWLDENAIQDLWWSILQKKVV 167
Query: 103 GKVIRNKQ----TNF----SEGYGFIEFVSHAAAERVLQTFNGTQMPST----------- 143
K+I+ K NF + GY F+EF S A+ L + NG +P
Sbjct: 168 VKIIKPKNMKPDINFQGLTNSGYCFVEFESFEDAQHAL-SLNGQLLPDIAMPSQSNFPNN 226
Query: 144 ----EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY-SSVKGAK 198
++ FRLNWA+ P++++FVGDL+A T+ L F+ + +S+K +
Sbjct: 227 PDNQKKYFRLNWASGATLSAPIVQTPEYSLFVGDLSASTTEAHLLAFFQKNFPNSIKTVR 286
Query: 199 VVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
V+TD +G+S+ +GFVRF +ESE+ R++ EMNG + RP+R+ A + A
Sbjct: 287 VMTDPISGKSRCFGFVRFTEESERQRALIEMNGAWFAGRPLRVALATPRNVA 338
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DPNNTT+FVGGL V++ L T+F +G + VKIP GK CGFV+++NR
Sbjct: 517 DPNNTTVFVGGLSSDVSEPTLHTLFKPFGLIQQVKIPPGKNCGFVKYSNR 566
>gi|391330636|ref|XP_003739762.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 364
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 128/257 (49%), Gaps = 19/257 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E + ++F G+ K+I S+ Y F+EFV+H+ A +
Sbjct: 13 RTLYVGNLDSGVTEDLVCALFSQMGQIKGCKIIHEPG---SDPYCFVEFVNHSDASSAIT 69
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGE---RRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
N E R+NWA+ + R D IFVGDL+ + L+E F +
Sbjct: 70 AMNARMCLGRE--LRVNWASSAIQQQTPHRPDTSKHHHIFVGDLSPQIETSDLREAF-SP 126
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK--- 247
+ + +VV D TT +SKGYGFV F ++ + ++ M+G +R +R A+ K
Sbjct: 127 FGEISDCRVVKDATTQKSKGYGFVSFTNKQDAENAIHTMDGSWLGSRAIRTNWASRKPNH 186
Query: 248 ---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLD-PSVTDDILKTVFGQYGELVH 303
+ G ++ Y ++ P+N T++ GGL+ + ++D L+ F ++GE+V
Sbjct: 187 KETGSYIGGHHRALNYDEV---FAQSSPSNCTVYCGGLNQMASSEDFLRQAFDEFGEIVD 243
Query: 304 VKIPAGKRCGFVQFANR 320
+++ K F++F ++
Sbjct: 244 IRLFKDKGYAFIKFNSK 260
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 39/204 (19%)
Query: 45 VGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGK 104
V W + QQ P+ PD S +++GDL P +E S + F GE +
Sbjct: 83 VNWASSAI----QQQTPH--RPDTSKH--HHIFVGDLSPQIETSDLREAFSPFGEISDCR 134
Query: 105 VIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWA----------TY 154
V+++ T S+GYGF+ F + AE + T +G+ + S + R NWA +Y
Sbjct: 135 VVKDATTQKSKGYGFVSFTNKQDAENAIHTMDGSWLGS--RAIRTNWASRKPNHKETGSY 192
Query: 155 GAGERR---------QDDGPDFTIFVGDL--AADVTDYVLQETFRAVYSSVKGAKVVTDR 203
G R Q + T++ G L A D+ L++ F + D
Sbjct: 193 IGGHHRALNYDEVFAQSSPSNCTVYCGGLNQMASSEDF-LRQAFDEF-------GEIVDI 244
Query: 204 TTGRSKGYGFVRFGDESEQLRSMT 227
+ KGY F++F + R++
Sbjct: 245 RLFKDKGYAFIKFNSKESACRAIV 268
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 23/166 (13%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
QD G T++VG+L + VT+ ++ F + +KG K++ + S Y FV F + S
Sbjct: 7 QDGGQPRTLYVGNLDSGVTEDLVCALFSQM-GQIKGCKIIHEPG---SDPYCFVEFVNHS 62
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
+ ++T MN +C R +R+ A++ Q+ T S+ + IFVG
Sbjct: 63 DASSAITAMNARMCLGRELRVNWASSA-------IQQQTPHRPDTSKHHH------IFVG 109
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANR 320
L P + L+ F +GE+ ++ K GFV F N+
Sbjct: 110 DLSPQIETSDLREAFSPFGEISDCRVVKDATTQKSKGYGFVSFTNK 155
>gi|238881096|gb|EEQ44734.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 875
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 121/232 (52%), Gaps = 34/232 (14%)
Query: 51 PVPPPSQQTQPYGVAPDASS-------DGIRSLWIGDLQPWMEESYIASIF-GHTGEFVS 102
P PP S Q Q +A D S + R+LW+GDL PW++E+ I ++ + V
Sbjct: 111 PNPPISTQ-QSTAIAADQESISGSELDNKPRTLWMGDLDPWLDENAIQDLWWSILQKKVV 169
Query: 103 GKVIRNKQ----TNF----SEGYGFIEFVSHAAAERVLQTFNGTQMPST----------- 143
K+I+ K NF + GY F+EF S A+ L + NG +P
Sbjct: 170 VKIIKPKNMKPDINFQGLTNSGYCFVEFESFEDAQHAL-SLNGQLLPDIAMPSQSNFPNN 228
Query: 144 ----EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY-SSVKGAK 198
++ FRLNWA+ P++++FVGDL+A T+ L F+ + +S+K +
Sbjct: 229 PDNQKKYFRLNWASGATLSAPIVQTPEYSLFVGDLSASTTEAHLLAFFQKNFPNSIKTVR 288
Query: 199 VVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
V+TD +G+S+ +GFVRF +ESE+ R++ EMNG + RP+R+ A + A
Sbjct: 289 VMTDPISGKSRCFGFVRFTEESERQRALIEMNGAWFAGRPLRVALATPRNVA 340
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DPNNTT+FVGGL V++ L T+F +G + VKIP GK CGFV+++NR
Sbjct: 509 DPNNTTVFVGGLSSDVSEPTLHTLFKPFGLIQQVKIPPGKNCGFVKYSNR 558
>gi|392586871|gb|EIW76206.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 876
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 105/214 (49%), Gaps = 41/214 (19%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTG-EFVSGKVIR----NKQTNFSEGYGFIEFVSHAAAE 129
+LW GDL+PWM+E Y + + V+ KV N Q + GY F+ F S + A
Sbjct: 183 TLWWGDLEPWMDEEYAKQVCTLMNWDPVNIKVPAGSDANGQHANNPGYCFLTFSSPSVAA 242
Query: 130 RVLQTFNGT------QMPSTEQNFRLNWATYGAGE---------------RRQDDGPDFT 168
VL N MP++ + F +NWAT G + Q +++
Sbjct: 243 SVLNQVNSDGAPQSPTMPNSTKPFTMNWATTMPGACVPSLHSAAGVPLIAQPQQYQKEYS 302
Query: 169 IFVGDLAADVTDYVLQETFRAV---------------YSSVKGAKVVTDRTTGRSKGYGF 213
IFVGDLA + ++ L FR + S K AK++ D TG S+GYGF
Sbjct: 303 IFVGDLAPETSNSDLVAVFRNPVLGLRNDREPKFIRPFLSCKSAKIMLDPVTGVSRGYGF 362
Query: 214 VRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
VRF DE++Q R++ EM+G+ C +RPMRI PA K
Sbjct: 363 VRFTDETDQQRALVEMHGLYCLSRPMRISPATAK 396
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 4/68 (5%)
Query: 257 KATYQNTQGSQGE----NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+A N G GE DP NTT+FVGGL P ++++ L+T F +G++ +VK+P GK C
Sbjct: 556 RAILSNLIGPNGEQLTSTDPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPIGKHC 615
Query: 313 GFVQFANR 320
GFVQF +
Sbjct: 616 GFVQFVRK 623
>gi|426223384|ref|XP_004005855.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Ovis aries]
Length = 375
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 129/245 (52%), Gaps = 7/245 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFYEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAF-APFGR 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS 180
Query: 254 QYQKATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++ +++ K
Sbjct: 181 TYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGY 240
Query: 313 GFVQF 317
FV+F
Sbjct: 241 SFVRF 245
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 136 NGTQMPSTEQNFRLNWAT---------YGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWAT Y + ++ Q + T++ G + + +
Sbjct: 157 GGQWLGGRQ--IRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGL 214
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 215 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNG 260
>gi|332376136|gb|AEE63208.1| unknown [Dendroctonus ponderosae]
Length = 371
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 122/252 (48%), Gaps = 14/252 (5%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L ++E + ++F G K+IR ++ Y F+EF +H +A L
Sbjct: 8 KTLYVGNLDISVQEDLLCALFSQIGPVKGCKIIREPG---NDPYAFVEFTNHQSASTALI 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N ++ ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRVF--LDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETDTLREAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG-----PAATKK 248
+ ++V D T +SKGY FV F ++E ++ MNG +R +R P +
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQAMNGQWLGSRSIRTNWSTRKPPPPRA 181
Query: 249 AATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA 308
Q ++ T+ + P NTT++ GG +TDD++ F ++G + +++
Sbjct: 182 EKPNQSKKQITFDEVYN---QTSPTNTTVYCGGFASGLTDDLVTKTFSRFGAIQDIRVFK 238
Query: 309 GKRCGFVQFANR 320
K F++F ++
Sbjct: 239 DKGYAFIKFVSK 250
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 36/223 (16%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + F GE + +++R+ QT S+GY F+ F
Sbjct: 85 GNQPKTDTSNHHHIFVGDLSPEIETDTLREAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 144
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR------------------QDDG 164
V A AE +Q NG + S ++ R NW+T R Q
Sbjct: 145 VKKAEAENAIQAMNGQWLGS--RSIRTNWSTRKPPPPRAEKPNQSKKQITFDEVYNQTSP 202
Query: 165 PDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLR 224
+ T++ G A+ +TD ++ +TF + + +++ +V D KGY F++F +
Sbjct: 203 TNTTVYCGGFASGLTDDLVTKTF-SRFGAIQDIRVFKD------KGYAFIKFVSKESATH 255
Query: 225 SM-----TEMNG--VLC--STRPMRIGPAATKKAATGQQYQKA 258
++ TE+NG V C +GP +ATG +A
Sbjct: 256 AIENIHNTEINGHTVKCFWGKENGGLGPDVNALSATGAAVSQA 298
>gi|300796220|ref|NP_001179985.1| nucleolysin TIAR [Bos taurus]
gi|296472594|tpg|DAA14709.1| TPA: TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Bos taurus]
Length = 380
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 126/246 (51%), Gaps = 7/246 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I +N + Y F+EF H A L
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALA 66
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 67 AMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAF-APFGK 122
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ M G R +R A K A
Sbjct: 123 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 182
Query: 254 QYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+ T Q + ++ P N T++ GG+ +TD +++ F +G+++ +++ K
Sbjct: 183 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGY 242
Query: 313 GFVQFA 318
FV+F+
Sbjct: 243 SFVRFS 248
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 26/166 (15%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ T+ + Y FV F +
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEHTS--NDPYCFVEFYEHR 59
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
+ ++ MNG + G++ K + T SQ ++ N+ +FVG
Sbjct: 60 DAAAALAAMNG----------------RKILGKEV-KVNWATTPSSQKKDTSNHFHVFVG 102
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANR 320
L P +T + +K+ F +G++ ++ K GFV F N+
Sbjct: 103 DLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNK 148
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 99 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 158
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDG---------------PDFTIFVGDLAADV 178
G + + R NWAT A + Q++ + T++ G +A+ +
Sbjct: 159 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 216
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 217 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 262
>gi|344306484|ref|XP_003421917.1| PREDICTED: nucleolysin TIAR-like [Loxodonta africana]
Length = 504
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 125/246 (50%), Gaps = 7/246 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R L++G+L + E I +F G S K+I +N + Y F+EF H A L
Sbjct: 138 RLLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALA 195
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 196 AMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAF-APFGK 251
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ M G R +R A K A
Sbjct: 252 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 311
Query: 254 QYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+ T Q + ++ P N T++ GG+ +TD +++ F +G+++ +++ K
Sbjct: 312 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGY 371
Query: 313 GFVQFA 318
FV+F+
Sbjct: 372 SFVRFS 377
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 228 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 287
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDG---------------PDFTIFVGDLAADV 178
G + + R NWAT A + Q++ + T++ G +A+ +
Sbjct: 288 GGQWLGG--RQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 345
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 346 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 391
>gi|383863609|ref|XP_003707272.1| PREDICTED: nucleolysin TIAR-like [Megachile rotundata]
Length = 392
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 117/250 (46%), Gaps = 9/250 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E + ++F G K+IR ++ Y F+EF +H A L
Sbjct: 8 RTLYVGNLDSSVSEELLCALFSQIGAVKGCKIIREPG---NDPYAFVEFTNHQCAATALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N + E ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRSFLNKE--MKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG---PAATKKAA 250
+ ++V D T +SKGY FV F +SE ++ MNG +R +R +
Sbjct: 122 ISNCRIVRDPQTMKSKGYAFVSFVKKSEAEAAIAAMNGQWLGSRSIRTNWSTRKPPPPRS 181
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
++ + N + ++ P N T++ GG +TD+++ F +G + +++ K
Sbjct: 182 ERPRHSNNSKPNYEEVYNQSSPTNCTVYCGGFTNGITDELINKTFSPFGTIQDIRVFKDK 241
Query: 311 RCGFVQFANR 320
F++F +
Sbjct: 242 GYAFIKFTTK 251
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 40/218 (18%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + F GE + +++R+ QT S+GY F+ F
Sbjct: 85 GNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTMKSKGYAFVSF 144
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT-------YGAGERRQDDGPDF-------- 167
V + AE + NG + S ++ R NW+T + P++
Sbjct: 145 VKKSEAEAAIAAMNGQWLGS--RSIRTNWSTRKPPPPRSERPRHSNNSKPNYEEVYNQSS 202
Query: 168 ----TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQL 223
T++ G +TD ++ +TF + + +++ +V D KGY F++F +
Sbjct: 203 PTNCTVYCGGFTNGITDELINKTF-SPFGTIQDIRVFKD------KGYAFIKFTTKEAAT 255
Query: 224 RSM-----TEMNG--VLC-----STRPMRIGPAATKKA 249
++ TE+NG V C + P +GP A +A
Sbjct: 256 HAIESTHNTEINGSIVKCFWGKENGDPNSVGPNANHQA 293
>gi|322709421|gb|EFZ00997.1| oligouridylate binding protein ,putative [Metarhizium anisopliae
ARSEF 23]
Length = 472
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 126/263 (47%), Gaps = 27/263 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G L+ + E + IF TG + K+I +K YGF+E+ AAER +
Sbjct: 84 RALYVGGLEQRVTEDVLRQIFETTGHVQNVKIIPDKNAK-GFNYGFVEYDDPGAAERAMS 142
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG + R+NWA ++D F IFVGDL+ +V D +L + F A + +
Sbjct: 143 TLNG------RREIRVNWAYQSNTSNKEDTSSHFHIFVGDLSNEVNDDILLQAFSA-FGT 195
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V A+V+ D TGR++GYGFV F D S+ ++++ M+G +R +R A K +
Sbjct: 196 VSEARVMWDMKTGRTRGYGFVAFRDRSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 255
Query: 254 QYQK------------ATYQNTQGSQGEND------PN-NTTIFVGGLDPSVTDDILKTV 294
Q Q +Q G D PN TT +VG L P T + + +
Sbjct: 256 QQQAMQAMGLTPTTPFGHHQFPAHGVGSYDVVLNQTPNWQTTCYVGNLTPYTTPNDVVPL 315
Query: 295 FGQYGELVHVKIPAGKRCGFVQF 317
F +G +V + A + F++
Sbjct: 316 FQNFGFVVESRFQADRGFAFIKM 338
>gi|115475838|ref|NP_001061515.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|35215045|dbj|BAC92404.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
gi|35215184|dbj|BAC92537.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
gi|113623484|dbj|BAF23429.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|215694402|dbj|BAG89395.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644698|dbj|BAI39945.1| putative poly(A)-binding protein [Oryza sativa Indica Group]
Length = 660
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 124/250 (49%), Gaps = 27/250 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL ++++ + +F G VS +V R+ T S GY ++ F S A A R L+
Sbjct: 40 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEM 99
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ ++ R+ IF+ +L + + L +TF +V+ ++
Sbjct: 100 LNFT--PINGKPIRIMYSNRDPSSRKSGAA---NIFIKNLDKSIDNKALYDTF-SVFGNI 153
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV T+ +G SKGYGFV+F E +++++NG+L + + + +GP K+
Sbjct: 154 LSCKVATE-MSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVRKQ------ 206
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI----PAGK 310
+N G +P ++V L S T+D LK +FG++G + V +
Sbjct: 207 ----ERENVSG-----NPKFNNVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKS 257
Query: 311 RC-GFVQFAN 319
RC GFV F N
Sbjct: 258 RCFGFVNFEN 267
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 15/186 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L E + IFG G S V+R S +GF+ F + A R ++
Sbjct: 219 NVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGK-SRCFGFVNFENPDDAARAVED 277
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTD-YV 182
NG + +E+ L + D +++ +L + D
Sbjct: 278 LNGKKFDDKEWYVCRAQKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLDDSIDDDEK 337
Query: 183 LQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
L+E F A + ++ KV+ D G SKG GFV F + R++ MNG + ++P+ +
Sbjct: 338 LKEIF-ADFGTITSCKVMRD-LNGVSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVA 395
Query: 243 PAATKK 248
A K+
Sbjct: 396 LAQRKE 401
>gi|54303906|gb|AAV33303.1| aging-associated gene 7 protein [Homo sapiens]
Length = 374
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 126/246 (51%), Gaps = 7/246 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I +N + Y F+EF H A L
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALA 66
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 67 AMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAF-APFGK 122
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ M G R +R A K A
Sbjct: 123 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 182
Query: 254 QYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+ T Q + ++ P N T++ GG+ +TD +++ F +G+++ +++ K
Sbjct: 183 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGY 242
Query: 313 GFVQFA 318
FV+F+
Sbjct: 243 SFVRFS 248
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 26/166 (15%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ T+ + Y FV F +
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEHTS--NDPYCFVEFYEHR 59
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
+ ++ MNG + G++ K + T SQ ++ N+ +FVG
Sbjct: 60 DAAAALAAMNG----------------RKILGKEV-KVNWATTPSSQKKDTSNHFHVFVG 102
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANR 320
L P +T + +K+ F +G++ ++ K GFV F N+
Sbjct: 103 DLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNK 148
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 99 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 158
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDG---------------PDFTIFVGDLAADV 178
G + + R NWAT A + Q++ + T++ G +A+ +
Sbjct: 159 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 216
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 217 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 262
>gi|296815788|ref|XP_002848231.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Arthroderma otae CBS 113480]
gi|238841256|gb|EEQ30918.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Arthroderma otae CBS 113480]
Length = 507
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 152/358 (42%), Gaps = 55/358 (15%)
Query: 5 PPSQPS-------------------DQTSQYQQQHQQWMAYQQQSQQQQQQHQTPVPPPV 45
PP Q S D + Q + M Q+ P+P
Sbjct: 15 PPHQSSAGAPGQQQQQQQQQQQQQFDNSQGNGQPNPSHMPPPPLPPVVIPQNTNPIP--- 71
Query: 46 GWTPQPVPPPSQQTQPYG----VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFV 101
T P P V A R+L++G L P + E + IF TG
Sbjct: 72 --TAITSPMSGNMMSPTAAGGYVRRSAPEPNKRALYVGGLDPRVTEDILKQIFETTGHVQ 129
Query: 102 SGKVIRNKQTNF-SEG--YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGE 158
S K+I +K NF S+G YGFIE+ AAER +QT NG ++ +E R+NWA
Sbjct: 130 SVKIIPDK--NFQSKGLNYGFIEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSNTA 185
Query: 159 RRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGD 218
++D F IFVGDL+ +V D VL + F A SV A+V+ D TGRS+GYGFV F D
Sbjct: 186 SKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAC-GSVSEARVMWDMKTGRSRGYGFVAFRD 244
Query: 219 ESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN-------------TQG 265
++ ++++ M+G +R +R A K + Q Q T G
Sbjct: 245 RADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHG 304
Query: 266 SQG-----ENDPN-NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
Q + P TT +VG L P T + L +F +G +V + A + FV+
Sbjct: 305 VQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQADRGFAFVKM 362
>gi|410900508|ref|XP_003963738.1| PREDICTED: nucleolysin TIAR-like isoform 3 [Takifugu rubripes]
Length = 395
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 132/253 (52%), Gaps = 17/253 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E I +F G S K+I + + S+ Y F+EFV H A
Sbjct: 8 KTLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDHTS--SDPYCFVEFVDHKDAASARA 65
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T N ++ E ++NWAT + +++ D F +FVGDL+ D+T ++ F A +
Sbjct: 66 TMNKRKILGKE--VKVNWATSPSCQKK-DTSNHFHVFVGDLSPDITTEDIRAAF-APFGH 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA--- 250
+ A+V+ D TG+SKGYGFV F ++ + ++++M G R +R A K A
Sbjct: 122 ISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAGQWLQGRQIRTNWATRKPPAPKS 181
Query: 251 ---TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP 307
G ++ K TQ S P+N T++ GG+ +T+ +++ F +G+++ +++
Sbjct: 182 FQDNGSKHLKFDDIVTQSS-----PHNCTVYCGGIQSGLTEHLMQQTFSPFGQIMEIRVF 236
Query: 308 AGKRCGFVQFANR 320
K FV+F++
Sbjct: 237 PDKGYSFVRFSSH 249
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 26/175 (14%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +
Sbjct: 98 VFVGDLSPDITTEDIRAAFAPFGHISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKM 157
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDGP---------------DFTIFVGDLAADV 178
G + + R NWAT A + QD+G + T++ G + + +
Sbjct: 158 AGQWLQGRQ--IRTNWATRKPPAPKSFQDNGSKHLKFDDIVTQSSPHNCTVYCGGIQSGL 215
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
T++++Q+TF + + + +V D KGY FVRF ++ +NG +
Sbjct: 216 TEHLMQQTF-SPFGQIMEIRVFPD------KGYSFVRFSSHDSAAHAIVSVNGTV 263
>gi|344283909|ref|XP_003413713.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Loxodonta
africana]
Length = 375
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 129/245 (52%), Gaps = 7/245 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFYEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAF-APFGR 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS 180
Query: 254 QYQKATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++ +++ K
Sbjct: 181 TYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGY 240
Query: 313 GFVQF 317
FV+F
Sbjct: 241 SFVRF 245
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 136 NGTQMPSTEQNFRLNWAT---------YGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWAT Y + ++ Q + T++ G + + +
Sbjct: 157 GGQWLGGRQ--IRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGL 214
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 215 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNG 260
>gi|14714709|gb|AAH10496.1| Tial1 protein [Mus musculus]
gi|148685700|gb|EDL17647.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_a [Mus musculus]
gi|149067624|gb|EDM17176.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_d [Rattus norvegicus]
Length = 375
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 126/246 (51%), Gaps = 7/246 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I +N + Y F+EF H A L
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALA 66
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 67 AMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAF-APFGK 122
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ M G R +R A K A
Sbjct: 123 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 182
Query: 254 QYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+ T Q + ++ P N T++ GG+ +TD +++ F +G+++ +++ K
Sbjct: 183 TQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGY 242
Query: 313 GFVQFA 318
FV+F+
Sbjct: 243 SFVRFS 248
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 26/166 (15%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ T+ + Y FV F +
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEHTS--NDPYCFVEFYEHR 59
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
+ ++ MNG + G++ K + T SQ ++ N+ +FVG
Sbjct: 60 DAAAALAAMNG----------------RKILGKEV-KVNWATTPSSQKKDTSNHFHVFVG 102
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANR 320
L P +T + +K+ F +G++ ++ K GFV F N+
Sbjct: 103 DLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNK 148
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 99 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 158
Query: 136 NGTQMPSTEQNFRLNWATY-----------GAGERRQDDG------PDFTIFVGDLAADV 178
G + + R NWAT + R +D + T++ G +A+ +
Sbjct: 159 GGQWLGGRQ--IRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 216
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 217 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 262
>gi|297737425|emb|CBI26626.3| unnamed protein product [Vitis vinifera]
Length = 224
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/63 (80%), Positives = 58/63 (92%)
Query: 258 ATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
+++QNTQG+QGE+DPNNTTIFVGGLD +VTDD L+ VF QYGELVHVKIP GKRCGFVQF
Sbjct: 35 SSFQNTQGNQGESDPNNTTIFVGGLDSNVTDDYLRQVFSQYGELVHVKIPVGKRCGFVQF 94
Query: 318 ANR 320
ANR
Sbjct: 95 ANR 97
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L + + Y+ +F GE V K+ K+ GF++F + A AE+ L
Sbjct: 53 TIFVGGLDSNVTDDYLRQVFSQYGELVHVKIPVGKRC------GFVQFANRACAEQALAG 106
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDD 163
NGTQ+ + Q+ RL+W + ++ Q D
Sbjct: 107 LNGTQLGA--QSIRLSWGRSPSNKQAQPD 133
>gi|158255914|dbj|BAF83928.1| unnamed protein product [Homo sapiens]
Length = 375
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 126/246 (51%), Gaps = 7/246 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I +N + Y F+EF H A L
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALA 66
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 67 AMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAF-APFGK 122
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ M G R +R A K A
Sbjct: 123 ISDARVVKDMATGKSKGYGFVSFYNKLDGENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 182
Query: 254 QYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+ T Q + ++ P N T++ GG+ +TD +++ F +G+++ +++ K
Sbjct: 183 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGY 242
Query: 313 GFVQFA 318
FV+F+
Sbjct: 243 SFVRFS 248
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 26/166 (15%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ T+ + Y FV F +
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEHTS--NDPYCFVEFYEHR 59
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
+ ++ MNG + G++ K + T SQ ++ N+ +FVG
Sbjct: 60 DAAAALAAMNG----------------RKILGKEV-KVNWATTPSSQKKDTSNHFHVFVG 102
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANR 320
L P +T + +K+ F +G++ ++ K GFV F N+
Sbjct: 103 DLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNK 148
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + E +
Sbjct: 99 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDGENAIVHM 158
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDG---------------PDFTIFVGDLAADV 178
G + + R NWAT A + Q++ + T++ G +A+ +
Sbjct: 159 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 216
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 217 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 262
>gi|301758210|ref|XP_002914948.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 2 [Ailuropoda
melanoleuca]
gi|410954993|ref|XP_003984143.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Felis catus]
Length = 375
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 129/245 (52%), Gaps = 7/245 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFYEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAF-APFGR 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS 180
Query: 254 QYQKATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++ +++ K
Sbjct: 181 TYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGY 240
Query: 313 GFVQF 317
FV+F
Sbjct: 241 SFVRF 245
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 136 NGTQMPSTEQNFRLNWAT---------YGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWAT Y + ++ Q + T++ G + + +
Sbjct: 157 GGQWLGGRQ--IRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGL 214
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 215 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNG 260
>gi|170084123|ref|XP_001873285.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650837|gb|EDR15077.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 422
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 130/267 (48%), Gaps = 32/267 (11%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERVL 132
L++G+L P + E + IF G K+I ++ N+ G YGF+E++ AAE L
Sbjct: 13 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYMDMRAAETAL 70
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT NG ++ TE R+NWA Y + ++D + +FVGDL+ +V D VL + F A +
Sbjct: 71 QTLNGRKIFDTE--IRVNWA-YQGQQNKEDTTGHYHVFVGDLSPEVNDEVLAKAFSA-FG 126
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI----------- 241
++ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +R +R+
Sbjct: 127 TMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAP 186
Query: 242 -----------GPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDI 290
G T A +Q Q + N+T++VG L P T
Sbjct: 187 PTTTASSPRPGGAVTTGSAPAPINFQGGPLSYESVVQ-QTPAYNSTVYVGNLVPYCTQAD 245
Query: 291 LKTVFGQYGELVHVKIPAGKRCGFVQF 317
L +F G L +++ A + FV+
Sbjct: 246 LIPLFQSIGYLSEIRMQADRGFAFVKL 272
>gi|116181152|ref|XP_001220425.1| hypothetical protein CHGG_01204 [Chaetomium globosum CBS 148.51]
gi|88185501|gb|EAQ92969.1| hypothetical protein CHGG_01204 [Chaetomium globosum CBS 148.51]
Length = 183
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 94/181 (51%), Gaps = 49/181 (27%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHT-GEFVSGKVIRNKQTNFSEGYGFIEFVSHA 126
+S++ ++LW+G+++ WM+E++I +I GE V KVIR++ +
Sbjct: 35 SSNEAAKTLWMGEMEGWMDETFIKNICRTVLGEDVQVKVIRDRNSG-------------- 80
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQET 186
D GP+++IFVGDL +V ++VL
Sbjct: 81 ----------------------------------DDRGPEYSIFVGDLGPEVNEFVLVSL 106
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
F++ + S K AK++TD TG+S+GYGFVRF DES+Q R++ EM GV C RPMRI A
Sbjct: 107 FQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDESDQQRALVEMQGVYCGNRPMRISTATP 166
Query: 247 K 247
K
Sbjct: 167 K 167
>gi|302683360|ref|XP_003031361.1| hypothetical protein SCHCODRAFT_257452 [Schizophyllum commune H4-8]
gi|300105053|gb|EFI96458.1| hypothetical protein SCHCODRAFT_257452 [Schizophyllum commune H4-8]
Length = 624
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 127/271 (46%), Gaps = 37/271 (13%)
Query: 43 PPVGWTPQPVP-------PPSQQTQPYGVAPDASSDGIR-----SLWIGDLQPWMEESYI 90
P V PQPVP PP P G A A + G SL++G+L P + ES +
Sbjct: 4 PVVENVPQPVPEQVAAAAPP-----PLGYAASAPTHGANTATSASLYVGELDPTVTESML 58
Query: 91 ASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLN 150
IF G S +V R+ T S GY ++ +++ A ER L+ N + + + + R+
Sbjct: 59 FEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQLNYSSIKN--RPCRIM 116
Query: 151 WATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKG 210
W+ R+ G IF+ +L + + L +TF A + +V KV TD G SKG
Sbjct: 117 WSQRDPALRKTGQG---NIFIKNLDEQIDNKALHDTF-AAFGNVLSCKVATDE-HGNSKG 171
Query: 211 YGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEN 270
YGFV + ++ +NG+L + + + +GP ++K Q E
Sbjct: 172 YGFVHYETAEAAENAIKSVNGMLLNDKKVYVGPHISRK-------------ERQSKIDEM 218
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
+ T ++V +DP VTD+ + +F QYG++
Sbjct: 219 RAHFTNLYVKNIDPEVTDEEFENLFKQYGQV 249
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 88/185 (47%), Gaps = 14/185 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+L++ ++ P + + ++F G+ S + R+ Q + G+GF+ F +H A++ +
Sbjct: 224 NLYVKNIDPEVTDEEFENLFKQYGQVQSSLLKRDDQGR-NLGFGFVNFETHEEAQKAVDA 282
Query: 135 -----FNGTQM------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
F+G ++ E+ L A + R + +++ +L DV D L
Sbjct: 283 LHESDFHGRKLYVARAQKKAEREAELRKQYDQARQERMNKYQGVNLYIKNLEDDVDDEKL 342
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F + ++ +V+ D G+SKG+GFV + E +++ EMN + ++P+ +
Sbjct: 343 RAEFEP-FGTITSCRVMRDER-GKSKGFGFVCYSAPDEATKAVAEMNNKMIGSKPLYVSL 400
Query: 244 AATKK 248
A K+
Sbjct: 401 AQRKE 405
>gi|358383610|gb|EHK21274.1| hypothetical protein TRIVIDRAFT_116557, partial [Trichoderma virens
Gv29-8]
Length = 466
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 128/267 (47%), Gaps = 31/267 (11%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G L + E + IF TG + K+I +K YGF+E+ AAER +Q
Sbjct: 77 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAK-GYNYGFVEYDDPGAAERAMQ 135
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ +E R+NWA ++D F IFVGDL+ +V D +L + F A + S
Sbjct: 136 TLNGRRVHQSE--IRVNWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDDILLQAFSA-FGS 192
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V A+V+ D TGRS+GYGFV F D + ++++ M+G +R +R A K +
Sbjct: 193 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSMA 252
Query: 254 Q----------------------YQKATYQNTQGSQGENDPN-NTTIFVGGLDPSVTDDI 290
Q + A+Y+ PN TT +VG L P T +
Sbjct: 253 QQQAMQAMGMTPTTPFGHHQFPAHGIASYEMILAQT----PNWQTTCYVGNLTPYTTPND 308
Query: 291 LKTVFGQYGELVHVKIPAGKRCGFVQF 317
+ +F +G +V + A + F++
Sbjct: 309 VVPLFQNFGFVVESRFQADRGFAFIKM 335
>gi|385302688|gb|EIF46808.1| mrna binding post-transcriptional regulator [Dekkera bruxellensis
AWRI1499]
Length = 257
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 109/199 (54%), Gaps = 18/199 (9%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYI----ASIFGHTGEFV-SGKVIRNKQTN----F 113
G +S+ + LW+G+L +E I A++ G G + S K+IR++Q +
Sbjct: 27 GANDGSSASPLPQLWMGELDQRWDEITIRQIWAALLGPMGIXIHSVKLIRDRQXSQMGLS 86
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMPST--EQNFRLNW-------ATYGAGERRQDDG 164
+ GY F+ F + A +VL FN +P + + FRLNW A + +
Sbjct: 87 NAGYCFVRFYNXEDASKVLTMFNXKPIPGSAGRRFFRLNWSSANIQAAAATSTXLPESAA 146
Query: 165 PDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLR 224
P+F+IFVGDL +T+++L ETF A Y S AKV+ D+ TGR +G+GFV+F +E+ R
Sbjct: 147 PEFSIFVGDLPQGITEHLLYETFHARYPSCASAKVMIDQNTGRVRGFGFVKFFXNAERQR 206
Query: 225 SMTEMNGVLCSTRPMRIGP 243
++TEM + RP+R+ P
Sbjct: 207 ALTEMQDYVLLGRPIRVSP 225
>gi|331230317|ref|XP_003327823.1| hypothetical protein PGTG_08590 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|403168138|ref|XP_003889766.1| hypothetical protein, variant 2 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|403168140|ref|XP_003889767.1| hypothetical protein, variant 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309306813|gb|EFP83404.1| hypothetical protein PGTG_08590 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167366|gb|EHS63397.1| hypothetical protein, variant 2 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167367|gb|EHS63398.1| hypothetical protein, variant 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 471
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 130/262 (49%), Gaps = 25/262 (9%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERVL 132
L++G+L P + E + IF G K+I ++ NF G YGF+E+ +AE L
Sbjct: 111 LYVGNLSPRVTEYMLQEIFSVAGPVQGVKIIPDR--NFQHGGLNYGFVEYYEMRSAETAL 168
Query: 133 QTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
QT G ++ TE R+NWA + ++D + +FVGDL+ +V D VL + F A +
Sbjct: 169 QTLGGRKIFDTE--IRVNWAYQNSQSNVKEDLSTHYHVFVGDLSPEVNDEVLAKAF-AAF 225
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI--------GP 243
S+ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +R +R+ G
Sbjct: 226 GSLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKNQGM 285
Query: 244 AATKKAATG--------QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVF 295
AAT A + N + + NTT++ G L P T L +F
Sbjct: 286 AATPGAVIAPGMGSGGMNRGGFGGATNYEAVVQQAPAYNTTVYTGNLVPYSTQADLIPLF 345
Query: 296 GQYGELVHVKIPAGKRCGFVQF 317
+G +V +++ A + FV+
Sbjct: 346 QGFGYIVEIRMQADRGFAFVKM 367
>gi|222624283|gb|EEE58415.1| hypothetical protein OsJ_09609 [Oryza sativa Japonica Group]
Length = 261
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/102 (58%), Positives = 70/102 (68%), Gaps = 14/102 (13%)
Query: 168 TIFVGDL-------------AADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFV 214
T+++GDL A + DY+LQETFR Y SVKGAKVVTD TGRSKGYGFV
Sbjct: 17 TLWIGDLQYWADENYLYNCFAPNRRDYLLQETFRVSYPSVKGAKVVTDPNTGRSKGYGFV 76
Query: 215 RFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ 256
+F DE+E+ R+MTEMNG+ CSTRPMRI A KK TG Q Q
Sbjct: 77 KFADENEKNRAMTEMNGMYCSTRPMRISAAIPKK-TTGSQLQ 117
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 14/83 (16%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFG-HTGEFV-------------SGKVIRNKQTNFS 114
S + +R+LWIGDLQ W +E+Y+ + F + +++ KV+ + T S
Sbjct: 11 SLEEVRTLWIGDLQYWADENYLYNCFAPNRRDYLLQETFRVSYPSVKGAKVVTDPNTGRS 70
Query: 115 EGYGFIEFVSHAAAERVLQTFNG 137
+GYGF++F R + NG
Sbjct: 71 KGYGFVKFADENEKNRAMTEMNG 93
>gi|188219593|ref|NP_071320.2| nucleolysin TIA-1 isoform p40 isoform 1 [Homo sapiens]
gi|114577932|ref|XP_001141475.1| PREDICTED: uncharacterized protein LOC459303 isoform 1 [Pan
troglodytes]
gi|397521826|ref|XP_003830987.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Pan paniscus]
gi|119620229|gb|EAW99823.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_a [Homo sapiens]
gi|410254976|gb|JAA15455.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410298558|gb|JAA27879.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410353837|gb|JAA43522.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 375
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 129/245 (52%), Gaps = 7/245 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAF-APFGR 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS 180
Query: 254 QYQKATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++ +++ K
Sbjct: 181 TYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGY 240
Query: 313 GFVQF 317
FV+F
Sbjct: 241 SFVRF 245
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 136 NGTQMPSTEQNFRLNWAT---------YGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWAT Y + ++ Q + T++ G + + +
Sbjct: 157 GGQWLGGRQ--IRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGL 214
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 215 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNG 260
>gi|296223620|ref|XP_002757701.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Callithrix
jacchus]
gi|403260488|ref|XP_003922703.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 375
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 129/245 (52%), Gaps = 7/245 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAF-APFGR 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS 180
Query: 254 QYQKATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++ +++ K
Sbjct: 181 TYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGY 240
Query: 313 GFVQF 317
FV+F
Sbjct: 241 SFVRF 245
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 136 NGTQMPSTEQNFRLNWAT---------YGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWAT Y + ++ Q + T++ G + + +
Sbjct: 157 GGQWLGGRQ--IRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGL 214
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 215 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNG 260
>gi|380816028|gb|AFE79888.1| nucleolysin TIA-1 isoform p40 isoform 1 [Macaca mulatta]
gi|383421175|gb|AFH33801.1| nucleolysin TIA-1 isoform p40 isoform 1 [Macaca mulatta]
Length = 375
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 129/245 (52%), Gaps = 7/245 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAF-APFGR 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS 180
Query: 254 QYQKATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++ +++ K
Sbjct: 181 TYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGY 240
Query: 313 GFVQF 317
FV+F
Sbjct: 241 SFVRF 245
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 136 NGTQMPSTEQNFRLNWAT---------YGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWAT Y + ++ Q + T++ G + + +
Sbjct: 157 GGQWLGGRQ--IRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGL 214
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 215 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNG 260
>gi|302496843|ref|XP_003010422.1| hypothetical protein ARB_03123 [Arthroderma benhamiae CBS 112371]
gi|291173965|gb|EFE29782.1| hypothetical protein ARB_03123 [Arthroderma benhamiae CBS 112371]
Length = 541
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 132/298 (44%), Gaps = 57/298 (19%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF-------------------- 113
R+L++G L P + E + IF TG S K+I +K +
Sbjct: 102 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNVSQRLLLLYLSDLYLFFVLYVYL 161
Query: 114 -------------SEG--YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGE 158
S+G YGFIE+ AAER +QT NG ++ +E R+NWA
Sbjct: 162 NLITSALLLVIFQSKGLNYGFIEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSNTA 219
Query: 159 RRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGD 218
++D F IFVGDL+ +V D VL + F A SV A+V+ D TGRS+GYGFV F +
Sbjct: 220 SKEDTSSHFHIFVGDLSNEVNDEVLLQAFSAC-GSVSEARVMWDMKTGRSRGYGFVAFRE 278
Query: 219 ESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN-------------TQG 265
++ ++++ M+G +R +R A K + Q Q T G
Sbjct: 279 RADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHG 338
Query: 266 SQG-----ENDPN-NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
Q + P TT +VG L P T + L +F +G +V + A + FV+
Sbjct: 339 VQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQADRGFAFVKM 396
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
+PN ++VGGLDP VT+DILK +F G + VKI
Sbjct: 98 EPNKRALYVGGLDPRVTEDILKQIFETTGHVQSVKI 133
>gi|225713382|gb|ACO12537.1| tRNA selenocysteine-associated protein 1 [Lepeophtheirus salmonis]
gi|290463033|gb|ADD24564.1| tRNA selenocysteine 1-associated protein 1 [Lepeophtheirus
salmonis]
Length = 257
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 99/178 (55%), Gaps = 10/178 (5%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGE--FVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+LWIG L+P+M+E +I + GE +S KVI+NK T YGFI F + A +
Sbjct: 6 ALWIGGLEPYMDEEFIRNSLALMGEDKIISIKVIKNKFTGVPASYGFINFEDDSCALMAM 65
Query: 133 QTFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
NG +P++ F+LN + R D +I+VGDL DV D L + F +
Sbjct: 66 HKLNGKIIPNSTPPVRFKLNHNS----TRLMPGEKDSSIWVGDLTPDVDDLTLFKFFSSR 121
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
+ S+K AKVV D++ G SKGYGF+RFG+E EQ ++ M GV +P+++ A K
Sbjct: 122 FQSIKSAKVVLDQS-GFSKGYGFIRFGNEQEQQSALISMMGVSGLGAKPIKVSLAIPK 178
>gi|344232977|gb|EGV64850.1| RNA-binding domain-containing protein [Candida tenuis ATCC 10573]
Length = 617
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 112/227 (49%), Gaps = 33/227 (14%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHT-GEFVSGKVIRNKQTN------------FSEGYGFI 120
R+LW+GDL PW++E I ++ + VS K+IR K GY FI
Sbjct: 79 RTLWMGDLDPWLDELGIEHLWWQILRKKVSIKLIRPKIPKQDMGYNMYSGGLSHSGYCFI 138
Query: 121 EFVSHAAAERVLQTFNG-----------TQMPSTEQN----FRLNWATYGAGERRQDDGP 165
EF + A+ L + NG TQ P+ N FRLNWA+ P
Sbjct: 139 EFETFEDAKYAL-SLNGQLLPDVAIPSQTQFPNNPDNQKKYFRLNWASGATLSAPIVQSP 197
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYS-SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLR 224
++++FVGDL+A T+ L F+ + SVK +V+TD G+S+ +GFVRF DESE+ R
Sbjct: 198 EYSLFVGDLSASTTEAHLLAFFQKSFPRSVKTVRVMTDPVNGKSRCFGFVRFTDESERQR 257
Query: 225 SMTEMNGVLCSTRPMRIG---PAATKKAATGQQYQKATYQNTQGSQG 268
++ EMNGV RP+R+ P KK+ Q+ Y G G
Sbjct: 258 ALHEMNGVWFGGRPLRVALATPRYNKKSFDKPPPQEMMYMTPFGFYG 304
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 97/250 (38%), Gaps = 14/250 (5%)
Query: 75 SLWIGDLQPWMEESYIASIFGHT--GEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
SL++GDL E+++ + F + + +V+ + S +GF+ F + +R L
Sbjct: 200 SLFVGDLSASTTEAHLLAFFQKSFPRSVKTVRVMTDPVNGKSRCFGFVRFTDESERQRAL 259
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG + R+ AT ++ D P + +T + T
Sbjct: 260 HEMNGVWF--GGRPLRVALATPRYNKKSFDKPPPQEMMY------MTPFGFYGTSPLPPP 311
Query: 193 SVKGAKVVT--DRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
+ D S G S + + G L PM +
Sbjct: 312 GSGPGVPMAHLDEDAPSSDSASLGASGPSSPGMFAQGPAQGQLTQAPPMGMPINGFNSPM 371
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
G + N Q Q NDP NTT+FVGGL V++ L +F +G + +KIP GK
Sbjct: 372 MGPP--RTPILNNQHGQPYNDPTNTTVFVGGLSSEVSEQTLFALFQPFGVVQQIKIPPGK 429
Query: 311 RCGFVQFANR 320
CGFV+++ R
Sbjct: 430 NCGFVKYSTR 439
>gi|253683353|dbj|BAH84828.1| TIA-1-related RNA binding protein [Spodoptera frugiperda]
Length = 283
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 130/252 (51%), Gaps = 11/252 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E +I ++FG GE K+IR ++ Y F+EF SH AA L
Sbjct: 8 KTLYVGNLDASVTEVFICTLFGQIGEVKGCKIIREPG---NDPYAFLEFTSHTAAATALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N + ++ ++NWAT + + D IFVGDL+ ++ ++L++ F A +
Sbjct: 65 AMN--KRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILRDAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK---KAA 250
+ ++V D T +SKGY FV F +++ ++ MNG +R +R + K K
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPSKPN 181
Query: 251 TGQQYQKATYQNT-QGSQGENDPNNTTIFVGGLDPSV-TDDILKTVFGQYGELVHVKIPA 308
G K Q T ++ P NTT++ GG +V T+D+++ F Q+G++ V++
Sbjct: 182 EGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNVITEDLMQNTFSQFGQIQDVRVFR 241
Query: 309 GKRCGFVQFANR 320
K F++F +
Sbjct: 242 DKGYAFIRFTTK 253
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 30/175 (17%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + F GE + +++R+ QT S+GY F+ F
Sbjct: 85 GNQPKTDTSNHHHIFVGDLSPEIETHILRDAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 144
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATY--------GAGERRQDDGPDF------- 167
V A AE +Q NG + S ++ R NW+T GA ++ P F
Sbjct: 145 VKKADAEAAIQAMNGQWLGS--RSIRTNWSTRKPPSKPNEGAPSSKRAKQPTFDEVYNQS 202
Query: 168 -----TIFVGDLAADV-TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRF 216
T++ G ++V T+ ++Q TF + + ++ +V R KGY F+RF
Sbjct: 203 SPTNTTVYCGGFTSNVITEDLMQNTF-SQFGQIQDVRVF------RDKGYAFIRF 250
>gi|340522219|gb|EGR52452.1| predicted protein [Trichoderma reesei QM6a]
Length = 477
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 128/267 (47%), Gaps = 31/267 (11%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G L + E + IF TG + K+I +K YGF+E+ AAER +Q
Sbjct: 75 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAK-GYNYGFVEYDDPGAAERAMQ 133
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ +E R+NWA ++D F IFVGDL+ +V D +L + F A + S
Sbjct: 134 TLNGRRVHQSE--IRVNWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDDILMQAFSA-FGS 190
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V A+V+ D TGRS+GYGFV F D + ++++ M+G +R +R A K +
Sbjct: 191 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSMA 250
Query: 254 Q----------------------YQKATYQNTQGSQGENDPN-NTTIFVGGLDPSVTDDI 290
Q + A+Y+ PN TT +VG L P T +
Sbjct: 251 QQQAMQAMGMTPTTPFGHHQFPAHGVASYEMILAQT----PNWQTTCYVGNLTPYTTPND 306
Query: 291 LKTVFGQYGELVHVKIPAGKRCGFVQF 317
+ +F +G ++ + A + F++
Sbjct: 307 VVPLFQNFGFVMESRFQADRGFAFIKM 333
>gi|297687491|ref|XP_002821246.1| PREDICTED: nucleolysin TIAR isoform 1 [Pongo abelii]
gi|410976205|ref|XP_003994513.1| PREDICTED: nucleolysin TIAR isoform 1 [Felis catus]
Length = 376
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 125/246 (50%), Gaps = 6/246 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I +N + Y F+EF H A L
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALA 66
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ F +FVGDL+ ++T ++ F A +
Sbjct: 67 AMNGRKILGKE--VKVNWATTPSSQKKILPVNHFHVFVGDLSPEITTEDIKSAF-APFGK 123
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ M G R +R A K A
Sbjct: 124 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 183
Query: 254 QYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+ T Q + ++ P N T++ GG+ +TD +++ F +G+++ +++ K
Sbjct: 184 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGY 243
Query: 313 GFVQFA 318
FV+F+
Sbjct: 244 SFVRFS 249
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 100 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 159
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDG---------------PDFTIFVGDLAADV 178
G + + R NWAT A + Q++ + T++ G +A+ +
Sbjct: 160 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 217
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 218 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 263
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 80/167 (47%), Gaps = 27/167 (16%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ T+ + Y FV F +
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEHTS--NDPYCFVEFYEHR 59
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDP-NNTTIFV 279
+ ++ MNG + G++ K + T SQ + P N+ +FV
Sbjct: 60 DAAAALAAMNG----------------RKILGKEV-KVNWATTPSSQKKILPVNHFHVFV 102
Query: 280 GGLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANR 320
G L P +T + +K+ F +G++ ++ K GFV F N+
Sbjct: 103 GDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNK 149
>gi|403216743|emb|CCK71239.1| hypothetical protein KNAG_0G01810 [Kazachstania naganishii CBS
8797]
Length = 596
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 123/244 (50%), Gaps = 25/244 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++G+L P + E+ + +F G S +V R+ T S GY ++ F H A ++ ++
Sbjct: 48 SLYVGELDPSVSEALLYDLFSPIGSVASIRVCRDAITKTSLGYAYVNFSDHEAGKQAIEK 107
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ W+ R++ G IF+ +L D+ + L +TF +V+ ++
Sbjct: 108 LNYT--PIKGKLCRIMWSQRDPSLRKKGHG---NIFIKNLNQDIDNKALFDTF-SVFGNI 161
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ- 253
+K+ TD TG+SKG+GFV F +ES ++ +NG+L + + + + P T+K Q
Sbjct: 162 LSSKIATDE-TGKSKGFGFVHFEEESAANEAIDALNGMLLNGQEIYVAPHLTRKERDSQL 220
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGK 310
+ KA + T ++V +D TD+ K FG+ G + V + P GK
Sbjct: 221 EETKAHF--------------TNVYVKNIDLETTDEEFKEFFGKIGTVTSVALERGPDGK 266
Query: 311 RCGF 314
GF
Sbjct: 267 LKGF 270
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 115/257 (44%), Gaps = 18/257 (7%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S K+ + +T S+G+GF+ F
Sbjct: 127 PSLRKKGHGNIFIKNLNQDIDNKALFDTFSVFGNILSSKIATD-ETGKSKGFGFVHFEEE 185
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQ 184
+AA + NG + E + + ++ FT ++V ++ + TD +
Sbjct: 186 SAANEAIDALNGMLLNGQEIYVAPHLTRKERDSQLEETKAHFTNVYVKNIDLETTDEEFK 245
Query: 185 ETFRAVYSSVKGAKVVTDR-TTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
E F + + V +R G+ KG+GFV + D ++ ++++ E+NG + + +G
Sbjct: 246 EFFGKIGTVTS---VALERGPDGKLKGFGFVNYEDHNDAVKAVEELNGAEFKDQELFVGR 302
Query: 244 AATKKA---ATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGE 300
A K + +QY+ + QG N +FV LD S+ D+ L+ F +G
Sbjct: 303 AQKKYERIQSLKKQYESTRLEKMAKYQGVN------LFVKNLDDSIDDEKLQEEFAPFGN 356
Query: 301 LVHVKI---PAGKRCGF 314
+ VK+ GK GF
Sbjct: 357 ITSVKVMRTENGKSKGF 373
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 22/197 (11%)
Query: 80 DLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQ 139
DL+ EE FG G S + R +G+GF+ + H A + ++ NG +
Sbjct: 236 DLETTDEE--FKEFFGKIGTVTSVALERGPDGKL-KGFGFVNYEDHNDAVKAVEELNGAE 292
Query: 140 MPSTE-------------QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQET 186
E Q+ + + + + + G +FV +L + D LQE
Sbjct: 293 FKDQELFVGRAQKKYERIQSLKKQYESTRLEKMAKYQG--VNLFVKNLDDSIDDEKLQEE 350
Query: 187 FRAVYSSVKGAKVVTDRT-TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F A + ++ KV+ RT G+SKG+GFV F E +++TE N + + +P+ + A
Sbjct: 351 F-APFGNITSVKVM--RTENGKSKGFGFVCFSSPEEATKAITEKNQQIVAGKPLYVAIAQ 407
Query: 246 TKKAATGQQYQKATYQN 262
K Q Q+ +N
Sbjct: 408 RKDVRRSQLAQQIQARN 424
>gi|58865762|ref|NP_001012096.1| TIA1 cytotoxic granule-associated RNA binding protein [Rattus
norvegicus]
gi|56268852|gb|AAH87064.1| TIA1 cytotoxic granule-associated RNA binding protein [Rattus
norvegicus]
gi|149036619|gb|EDL91237.1| rCG56007, isoform CRA_c [Rattus norvegicus]
Length = 375
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 130/248 (52%), Gaps = 7/248 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAF-APFGR 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS 180
Query: 254 QYQKATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Y+ T Q + ++ P N T++ GG+ +T+ +++ F +G+++ +++ K
Sbjct: 181 TYESNTKQLSYDEVVSQSSPGNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGY 240
Query: 313 GFVQFANR 320
F++F++
Sbjct: 241 SFIRFSSH 248
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 136 NGTQMPSTEQNFRLNWAT---------YGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWAT Y + ++ Q + T++ G + + +
Sbjct: 157 GGQWLGGRQ--IRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPGNCTVYCGGVTSGL 214
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY F+RF ++ +NG
Sbjct: 215 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFIRFSSHESAAHAIVSVNG 260
>gi|409051430|gb|EKM60906.1| hypothetical protein PHACADRAFT_247129 [Phanerochaete carnosa
HHB-10118-sp]
Length = 425
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 131/267 (49%), Gaps = 31/267 (11%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERVL 132
L++G+L P + E + IF G K+I ++ N+ G YGF+E++ AAE L
Sbjct: 15 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYMDMRAAETAL 72
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT NG ++ TE R+NWA Y + ++D + +FVGDL+ +V D VL + F A +
Sbjct: 73 QTLNGRKIFDTE--IRVNWA-YQGQQNKEDTTGHYHVFVGDLSPEVNDEVLAKAF-AAFG 128
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK----- 247
++ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +R +R+ A K
Sbjct: 129 TLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAP 188
Query: 248 ----------KAATGQQYQKATYQNTQG------SQGENDPN-NTTIFVGGLDPSVTDDI 290
N QG S + P N+T++VG L P T
Sbjct: 189 PPRAGNGGNGSDGGHGGGGAPAPMNFQGGPLSYESVVQQTPAYNSTVYVGNLVPYATQAD 248
Query: 291 LKTVFGQYGELVHVKIPAGKRCGFVQF 317
L +F G L +++ A + FV+
Sbjct: 249 LIPLFQSIGYLSEIRMQADRGFAFVKL 275
>gi|392571669|gb|EIW64841.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 437
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 131/279 (46%), Gaps = 43/279 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERVL 132
L++G+L P + E + IF G K+I ++ N+ G YGF+E++ AAE L
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYMDMRAAETAL 75
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT NG ++ TE R+NWA Y + ++D + +FVGDL+ +V D VL + F A +
Sbjct: 76 QTLNGRKIFDTE--IRVNWA-YQGQQNKEDTSNHYHVFVGDLSPEVNDEVLGKAFSA-FG 131
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
++ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +R +R+ A K +
Sbjct: 132 TLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGSP 191
Query: 253 QQYQKATY---------------QNTQGSQGENDPN-------------------NTTIF 278
N+ G G P NTT++
Sbjct: 192 GGPGGPGGPGGPGGPGGPGGPPRSNSMGGGGAPAPMNFTGGPLSYEGVVTQTPAYNTTVY 251
Query: 279 VGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
VG L P T L +F G L +++ + + FV+
Sbjct: 252 VGNLVPYATQADLIPLFQSIGYLSEIRMQSDRGFAFVKL 290
>gi|294463675|gb|ADE77364.1| unknown [Picea sitchensis]
Length = 253
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 69/103 (66%), Gaps = 8/103 (7%)
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQ--YQKATYQNTQGSQG------ENDPNNTTI 277
MTEMN V CSTRPMRI A KK+A QQ K YQ S +D NNTTI
Sbjct: 1 MTEMNNVYCSTRPMRISAATPKKSAGFQQQYTPKVAYQTPAYSAPPAQVFQSDDQNNTTI 60
Query: 278 FVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
FVGGLDP+V+D+ L+ +FGQ+GELV+VKIP K CGFVQF NR
Sbjct: 61 FVGGLDPTVSDEDLRQIFGQFGELVYVKIPVNKGCGFVQFGNR 103
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + + + IFG GE V K+ NK G GF++F + A AE LQ
Sbjct: 59 TIFVGGLDPTVSDEDLRQIFGQFGELVYVKIPVNK------GCGFVQFGNRACAEEALQR 112
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDG 164
+GT + +Q RL+W A ++ Q G
Sbjct: 113 VHGTVI--GQQTVRLSWGRSPATKQDQPAG 140
>gi|297687495|ref|XP_002821248.1| PREDICTED: nucleolysin TIAR isoform 3 [Pongo abelii]
Length = 386
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 125/246 (50%), Gaps = 6/246 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I +N + Y F+EF H A L
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALA 66
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ F +FVGDL+ ++T ++ F A +
Sbjct: 67 AMNGRKILGKE--VKVNWATTPSSQKKILPVNHFHVFVGDLSPEITTEDIKSAF-APFGK 123
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ M G R +R A K A
Sbjct: 124 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 183
Query: 254 QYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+ T Q + ++ P N T++ GG+ +TD +++ F +G+++ +++ K
Sbjct: 184 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGY 243
Query: 313 GFVQFA 318
FV+F+
Sbjct: 244 SFVRFS 249
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 100 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 159
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDG---------------PDFTIFVGDLAADV 178
G + + R NWAT A + Q++ + T++ G +A+ +
Sbjct: 160 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 217
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 218 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 263
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 80/167 (47%), Gaps = 27/167 (16%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ T+ + Y FV F +
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEHTS--NDPYCFVEFYEHR 59
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDP-NNTTIFV 279
+ ++ MNG + G++ K + T SQ + P N+ +FV
Sbjct: 60 DAAAALAAMNG----------------RKILGKEV-KVNWATTPSSQKKILPVNHFHVFV 102
Query: 280 GGLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANR 320
G L P +T + +K+ F +G++ ++ K GFV F N+
Sbjct: 103 GDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNK 149
>gi|241953763|ref|XP_002419603.1| RNA-binding protein, putative; U1 snRNP protein, putative [Candida
dubliniensis CD36]
gi|223642943|emb|CAX43198.1| RNA-binding protein, putative [Candida dubliniensis CD36]
Length = 792
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 121/230 (52%), Gaps = 34/230 (14%)
Query: 51 PVPPPSQQTQPYGVAPDASS-------DGIRSLWIGDLQPWMEESYIASIF-GHTGEFVS 102
P PP S Q Q +A D S + R+LW+GDL PW++E+ I ++ + V
Sbjct: 87 PNPPISTQ-QSTAIAADQESTTGSDLDNKPRTLWMGDLDPWLDENAIRDLWWSILQKKVV 145
Query: 103 GKVIR--NKQTNFS------EGYGFIEFVSHAAAERVLQTFNGTQMPST----------- 143
K+I+ N + +FS GY F+EF S A+ L + NG +P
Sbjct: 146 VKIIKPKNMKPDFSFQGLTNSGYCFVEFESFEDAQHAL-SLNGQLLPDIAMPSQSNFPNN 204
Query: 144 ----EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY-SSVKGAK 198
++ FRLNWA+ P++++FVGDL+A T+ L F+ + +S+K +
Sbjct: 205 PDNQKKYFRLNWASGATLSAPIVQTPEYSLFVGDLSASTTEAHLLAFFQKNFPNSIKTVR 264
Query: 199 VVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
V+TD +G+S+ +GFVRF +ESE+ R++ EMNG + RP+R+ A +
Sbjct: 265 VMTDPISGKSRCFGFVRFTEESERQRALIEMNGAWFAGRPLRVALATPRN 314
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DPNNTT+FVGGL V++ L T+F +G + VKIP GK CGFV+++ R
Sbjct: 461 DPNNTTVFVGGLSADVSEPTLHTLFKPFGLIQQVKIPPGKNCGFVKYSTR 510
>gi|356521524|ref|XP_003529405.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 651
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 127/250 (50%), Gaps = 27/250 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + ++ + +F G+ VS +V R+ + S GYG++ F + A R L
Sbjct: 32 SLYVGDLDPNVTDAQLYDLFNQLGQVVSVRVCRDLTSRRSLGYGYVNFSNPQDAARALDV 91
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ ++ R+ G IF+ +L + L +TF + + ++
Sbjct: 92 LNFT--PLNNRPIRIMYSHRDPSIRKSGQG---NIFIKNLDRAIDHKALHDTF-STFGNI 145
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV TD ++G+SKGYGFV+F +E +++ ++NG+L + + + +GP +K
Sbjct: 146 LSCKVATD-SSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGP-FLRKQERESA 203
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL---VHVKIPAGK- 310
KA + N +FV L S TDD LK FG++G + V ++ GK
Sbjct: 204 ADKAKFNN--------------VFVKNLSESTTDDELKNTFGEFGTITSAVVMRDGDGKS 249
Query: 311 RC-GFVQFAN 319
+C GFV F N
Sbjct: 250 KCFGFVNFEN 259
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 122/261 (46%), Gaps = 18/261 (6%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S KV + S+GYGF++F +
Sbjct: 111 PSIRKSGQGNIFIKNLDRAIDHKALHDTFSTFGNILSCKVATDSSGQ-SKGYGFVQFDNE 169
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
+A++ ++ NG + + +Q + + E D +FV +L+ TD L+
Sbjct: 170 ESAQKAIEKLNGMLL-NDKQVYVGPFLRKQERESAADKAKFNNVFVKNLSESTTDDELKN 228
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF + ++ A V+ D G+SK +GFV F + + R++ +NG + +G A
Sbjct: 229 TF-GEFGTITSAVVMRD-GDGKSKCFGFVNFENADDAARAVEALNGKNFDDKEWYVGKAQ 286
Query: 246 TK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
K + Q+++++ + QG N ++V LD S+ D+ LK +F +G +
Sbjct: 287 KKSERENELKQRFEQSMKEAADKYQGAN------LYVKNLDDSIGDEKLKELFSPFGTIT 340
Query: 303 HVKI---PAG--KRCGFVQFA 318
K+ P G + GFV F+
Sbjct: 341 SCKVMRDPNGLSRGSGFVAFS 361
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 82/185 (44%), Gaps = 14/185 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L + + + FG G S V+R+ S+ +GF+ F + A R ++
Sbjct: 211 NVFVKNLSESTTDDELKNTFGEFGTITSAVVMRDGDGK-SKCFGFVNFENADDAARAVEA 269
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG +E+ L + + D ++V +L + D L
Sbjct: 270 LNGKNFDDKEWYVGKAQKKSERENELKQRFEQSMKEAADKYQGANLYVKNLDDSIGDEKL 329
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+E F + + ++ KV+ D G S+G GFV F E R++ EMNG + ++P+ +
Sbjct: 330 KELF-SPFGTITSCKVMRD-PNGLSRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVTL 387
Query: 244 AATKK 248
A K+
Sbjct: 388 AQRKE 392
>gi|308321266|gb|ADO27785.1| nucleolysin tiar [Ictalurus furcatus]
Length = 374
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 132/249 (53%), Gaps = 9/249 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G S K+I +N + Y F+EF H A L
Sbjct: 8 KTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALA 65
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 66 AMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTDDIRAAF-APFGK 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TTG+SKGYGFV F ++ + ++ M G R +R AT+K +
Sbjct: 122 ISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTN-WATRKPPAPK 180
Query: 254 QYQKATYQNTQGSQ--GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKR 311
Q A+ + + ++ P N T++ GG+ ++D +++ F +G+++ +++ K
Sbjct: 181 NTQDASPKQLRYEDVVNQSSPQNCTVYCGGIQSGLSDHLMRQTFSPFGQIMEIRVFPEKG 240
Query: 312 CGFVQFANR 320
F++F++
Sbjct: 241 YSFIRFSSH 249
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 98 VFVGDLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHM 157
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDGP---------------DFTIFVGDLAADV 178
G + + R NWAT A + QD P + T++ G + + +
Sbjct: 158 GGQWLGGRQ--IRTNWATRKPPAPKNTQDASPKQLRYEDVVNQSSPQNCTVYCGGIQSGL 215
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
+D+++++TF + + + +V + KGY F+RF ++ +NG
Sbjct: 216 SDHLMRQTF-SPFGQIMEIRVFPE------KGYSFIRFSSHESAAHAIVSVNG 261
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 26/166 (15%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+D+ T++VG+L+ DVT+ ++ + F + K K++T+ T+ + Y FV F +
Sbjct: 2 EDESHPKTLYVGNLSRDVTENLILQLFTQI-GPCKSCKMITEHTS--NDPYCFVEFYEHR 58
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
+ ++ MNG + G++ K + T SQ ++ N+ +FVG
Sbjct: 59 DAAAALAAMNG----------------RKILGKEV-KVNWATTPSSQKKDTSNHFHVFVG 101
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANR 320
L P +T D ++ F +G++ ++ K GFV F N+
Sbjct: 102 DLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNK 147
>gi|302694831|ref|XP_003037094.1| hypothetical protein SCHCODRAFT_84062 [Schizophyllum commune H4-8]
gi|300110791|gb|EFJ02192.1| hypothetical protein SCHCODRAFT_84062 [Schizophyllum commune H4-8]
Length = 435
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 129/276 (46%), Gaps = 40/276 (14%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERVL 132
L++G+L P + E + IF G K+I ++ N+ G YGF+E++ AAE L
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYLDMRAAETAL 75
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT NG ++ TE R+NWA Y + ++D + +FVGDL+ +V D VL + F A +
Sbjct: 76 QTLNGRRIFDTE--IRVNWA-YQGQQNKEDTTNHYHVFVGDLSPEVNDDVLAKAFSA-FG 131
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK----- 247
++ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +R +R+ A K
Sbjct: 132 TLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGSL 191
Query: 248 -------KAATGQQYQKATYQNTQGSQGENDPN-------------------NTTIFVGG 281
G+ G P NTT++VG
Sbjct: 192 GGGGGGGGPVGSPIGGPPAMARPMGAGGAPAPMNLAGGPLSYEQVLTQTPAYNTTVYVGN 251
Query: 282 LDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
L P T L +F G L +++ A + FV+
Sbjct: 252 LVPYCTQADLIPLFQTIGYLSEIRMQADRGFAFVKL 287
>gi|241998018|ref|XP_002433652.1| tRNA selenocysteine associated protein, putative [Ixodes
scapularis]
gi|215495411|gb|EEC05052.1| tRNA selenocysteine associated protein, putative [Ixodes
scapularis]
Length = 181
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 104/187 (55%), Gaps = 17/187 (9%)
Query: 81 LQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQ 139
L+P M+E ++ F GE V K+IRN+ T GYGF++F AA+R L NG
Sbjct: 1 LEPTMDEYFVQQAFTMMGENPVHVKIIRNRITGMPRGYGFLDFGDEEAAQRALLRCNGRP 60
Query: 140 MPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKV 199
+P+ Q + +F++FVGDL+++V D L F Y SVK AKV
Sbjct: 61 IPNATQGVSPSLLPR-----------EFSMFVGDLSSEVDDVHLYHAFSQRYPSVKAAKV 109
Query: 200 VTDRTTGRSKGYGFVRFGDESEQLRSMTEM-NGVLCSTRPMRIGPAATKKAATGQ---QY 255
V D+ +G SKG+GFVRF DESE ++ +M + +L ++P+R+G A ++ A G+
Sbjct: 110 VLDQ-SGLSKGFGFVRFSDESEYQEALVDMQHSLLVGSKPIRVGVANPRRVADGRVGGDG 168
Query: 256 QKATYQN 262
Q+ Y+N
Sbjct: 169 QRVFYRN 175
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 31/152 (20%)
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
L + +Y +Q+ F + + K++ +R TG +GYGF+ FGDE R++ NG
Sbjct: 1 LEPTMDEYFVQQAFTMMGENPVHVKIIRNRITGMPRGYGFLDFGDEEAAQRALLRCNG-- 58
Query: 234 CSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKT 293
RP+ P A TQG P ++FVG L V D L
Sbjct: 59 ---RPI---PNA-----------------TQGVSPSLLPREFSMFVGDLSSEVDDVHLYH 95
Query: 294 VFGQ-YGELVHVKIP-----AGKRCGFVQFAN 319
F Q Y + K+ K GFV+F++
Sbjct: 96 AFSQRYPSVKAAKVVLDQSGLSKGFGFVRFSD 127
>gi|413920410|gb|AFW60342.1| nucleolysin TIAR [Zea mays]
Length = 447
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 141/296 (47%), Gaps = 30/296 (10%)
Query: 43 PPV--GWTPQPVPPPSQQTQPY---GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHT 97
PP+ G P P + Q +P + P S RS+++G++ + ++ + +F
Sbjct: 39 PPLFPGHHPHPGLLAAPQIEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDTVLQEVFQSI 98
Query: 98 GEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAG 157
G K+IR ++++F GFI++ A + + NG Q+ Q ++NWA
Sbjct: 99 GPVEGCKLIRKEKSSF----GFIDYYDRRYAALAILSLNGRQLYG--QPIKVNWAY--TS 150
Query: 158 ERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFG 217
R+D F IFVGDL +VTD L F YS+ A+V+ D+ TGRS+G+GFV F
Sbjct: 151 TPREDTSGHFNIFVGDLCPEVTDATLFAFFSG-YSTCSDARVMWDQKTGRSRGFGFVSFR 209
Query: 218 DESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQG----- 268
++ + ++ ++NG R +R ATK A G++ Q K N G
Sbjct: 210 NQQDAQSAINDLNGKWLGNRQIRCN-WATKGANAGEEKQILDTKVDLSNGSSESGKENPN 268
Query: 269 ----ENDPNNTTIFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFA 318
EN+P TT++VG L T + + F G + V++ K GFV+++
Sbjct: 269 EDGPENNPQFTTVYVGNLPHEATMNDVHLFFHSLGAGSIEEVRVTRDKGFGFVRYS 324
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 94/215 (43%), Gaps = 35/215 (16%)
Query: 55 PSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFS 114
P + Y P + G ++++GDL P + ++ + + F +V+ +++T S
Sbjct: 141 PIKVNWAYTSTPREDTSGHFNIFVGDLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGRS 200
Query: 115 EGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA--GERRQ----------- 161
G+GF+ F + A+ + NG + + + R NWAT GA GE +Q
Sbjct: 201 RGFGFVSFRNQQDAQSAINDLNGKWLGNRQ--IRCNWATKGANAGEEKQILDTKVDLSNG 258
Query: 162 ----------DDGPD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTG 206
+DGP+ T++VG+L + T + F ++ GA + +
Sbjct: 259 SSESGKENPNEDGPENNPQFTTVYVGNLPHEATMNDVHLFFHSL-----GAGSIEEVRVT 313
Query: 207 RSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
R KG+GFVR+ E ++ NG L R ++
Sbjct: 314 RDKGFGFVRYSTHEEAALAIQMGNGQLIGGRQIKC 348
>gi|291404907|ref|XP_002718787.1| PREDICTED: TIA-1 related protein-like [Oryctolagus cuniculus]
Length = 450
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 135/279 (48%), Gaps = 15/279 (5%)
Query: 49 PQPVPPPSQQTQ--------PYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEF 100
P +PP S +T P G + + G ++G+L + E I +F G
Sbjct: 51 PLVLPPGSAETVDRETSSNVPAGHLGEETRPGASPRYVGNLSRDVTEVLILQLFSQIGPC 110
Query: 101 VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR 160
S K+I +N + Y F+EF H A L NG ++ E ++NWAT + +++
Sbjct: 111 KSCKMITEHTSN--DPYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK 166
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
D F +FVGDL+ ++T ++ F A + + A+VV D TG+SKGYGFV F ++
Sbjct: 167 -DTSNHFHVFVGDLSPEITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKL 224
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFV 279
+ ++ M G R +R A K A + T Q + ++ P N T++
Sbjct: 225 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYC 284
Query: 280 GGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFA 318
GG+ +TD +++ F +G+++ +++ K FV+F+
Sbjct: 285 GGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFS 323
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 174 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 233
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDG---------------PDFTIFVGDLAADV 178
G + + R NWAT A + Q++ + T++ G +A+ +
Sbjct: 234 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 291
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 292 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 337
>gi|255760011|ref|NP_001157551.1| nucleolysin TIA-1 isoform 3 [Mus musculus]
gi|23271442|gb|AAH23813.1| Tia1 protein [Mus musculus]
Length = 285
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 128/244 (52%), Gaps = 7/244 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAF-APFGR 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS 180
Query: 254 QYQKATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Y+ T Q + ++ PNN T++ GG+ +T+ +++ F +G+++ +++ K
Sbjct: 181 TYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGY 240
Query: 313 GFVQ 316
FV+
Sbjct: 241 SFVR 244
>gi|302654241|ref|XP_003018929.1| hypothetical protein TRV_07061 [Trichophyton verrucosum HKI 0517]
gi|291182617|gb|EFE38284.1| hypothetical protein TRV_07061 [Trichophyton verrucosum HKI 0517]
Length = 543
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 132/300 (44%), Gaps = 59/300 (19%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF-------------------- 113
R+L++G L P + E + IF TG S K+I +K +
Sbjct: 102 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNVSQHLLLLYLSDLYLFFTYVLYV 161
Query: 114 ---------------SEG--YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA 156
S+G YGFIE+ AAER +QT NG ++ +E R+NWA
Sbjct: 162 YLYLITSALLLVIFQSKGLNYGFIEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSN 219
Query: 157 GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRF 216
++D F IFVGDL+ +V D VL + F A SV A+V+ D TGRS+GYGFV F
Sbjct: 220 TASKEDTSSHFHIFVGDLSNEVNDEVLLQAFSAC-GSVSEARVMWDMKTGRSRGYGFVAF 278
Query: 217 GDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN-------------T 263
+ ++ ++++ M+G +R +R A K + Q Q T
Sbjct: 279 RERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPT 338
Query: 264 QGSQG-----ENDPN-NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
G Q + P TT +VG L P T + L +F +G +V + A + FV+
Sbjct: 339 HGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQADRGFAFVKM 398
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
+PN ++VGGLDP VT+DILK +F G + VKI
Sbjct: 98 EPNKRALYVGGLDPRVTEDILKQIFETTGHVQSVKI 133
>gi|195504962|ref|XP_002099304.1| GE10834 [Drosophila yakuba]
gi|194185405|gb|EDW99016.1| GE10834 [Drosophila yakuba]
Length = 464
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 125/267 (46%), Gaps = 26/267 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++FG G S K+IR ++ Y FIE+ ++ AA L
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFGTMGPVKSCKIIREPG---NDPYAFIEYSNYQAATTALT 63
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N ++ ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLF--LDKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG----------- 242
+ ++V D T +SKGY FV F ++E ++ MNG +R +R
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 243 PAATKKAATGQQYQKATYQNTQGSQ--------GENDPNNTTIFVGGLDPSV-TDDILKT 293
P+ G +GSQ ++ P NTT++ GG P+V +DD++
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHK 240
Query: 294 VFGQYGELVHVKIPAGKRCGFVQFANR 320
F Q+G + V++ K F++F +
Sbjct: 241 HFVQFGPIHDVRVFKDKGFSFIKFVTK 267
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P +++GDL P +E + F GE + +++R+ T S+GY F+ F
Sbjct: 84 GNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSF 143
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT 153
V A AE +Q NG + S ++ R NW+T
Sbjct: 144 VKKAEAENAIQAMNGQWIGS--RSIRTNWST 172
>gi|448097114|ref|XP_004198591.1| Piso0_001971 [Millerozyma farinosa CBS 7064]
gi|359380013|emb|CCE82254.1| Piso0_001971 [Millerozyma farinosa CBS 7064]
Length = 655
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 116/221 (52%), Gaps = 36/221 (16%)
Query: 74 RSLWIGDLQPWMEESYIASI-FGHTGEFVSGKVIR--NKQTNF------SEGYGFIEFVS 124
R+LW+GDL PW++E+ IA + + + V+ K+IR + +T+F GY F+EF +
Sbjct: 124 RTLWMGDLDPWLDETAIADLWYNVLKKRVNVKLIRPRSHKTDFPYHGVSHLGYCFVEFDN 183
Query: 125 HAAAERVLQTFNGTQMPST---------------EQNFRLNWATYGAGERRQDDGPDFTI 169
A+ L + NG +P + ++ FRLNWA + P+F++
Sbjct: 184 LYDAQLAL-SLNGKPLPQSAMPSQKVRSRNQDNQKKYFRLNWANGATLDAPIIHTPEFSL 242
Query: 170 FVGDLAADVTDYVLQETFRAVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE 228
FVGDL+A T+ L F+ Y SVK +V+TD +G+S+ +GFVRF DE + +++ E
Sbjct: 243 FVGDLSASTTEAHLLAFFQNKYPESVKTVRVITDPVSGKSRCFGFVRFSDEHARSKALVE 302
Query: 229 MNGVLCSTRPMRIGPAATK-KAATGQQYQKATYQNTQGSQG 268
M G R +R+ A+ K A TG NT GS G
Sbjct: 303 MQGTWFGGRQLRVALASAKTNAKTG---------NTNGSPG 334
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 101/251 (40%), Gaps = 27/251 (10%)
Query: 75 SLWIGDLQPWMEESYIASIF--GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
SL++GDL E+++ + F + + +VI + + S +GF+ F A + L
Sbjct: 241 SLFVGDLSASTTEAHLLAFFQNKYPESVKTVRVITDPVSGKSRCFGFVRFSDEHARSKAL 300
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
GT + L A A + P F + + Q F+A
Sbjct: 301 VEMQGTWFGGRQLRVALASAKTNAKTGNTNGSPGFY-----------NVLPQHFFQA--- 346
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
G + G YG + +S Q +++ + L S R G + + +
Sbjct: 347 --PGGLPLATSPFGY---YGNSQLHPQS-QYPALSSSSEALNSVR--HHGHSVIPDSISS 398
Query: 253 QQYQKATYQNTQG---SQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAG 309
+ N G Q DP NTT+FVGGL V D L +F +G + VKIP G
Sbjct: 399 YNGTEGLSNNLYGIHHGQPFADPKNTTVFVGGLSAEVNDQTLFALFKPFGIIQQVKIPPG 458
Query: 310 KRCGFVQFANR 320
K CGF++++ R
Sbjct: 459 KNCGFIKYSKR 469
>gi|148666753|gb|EDK99169.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_c
[Mus musculus]
Length = 293
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 128/244 (52%), Gaps = 7/244 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 15 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALA 72
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 73 AMNGRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAF-APFGR 128
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 129 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS 188
Query: 254 QYQKATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Y+ T Q + ++ PNN T++ GG+ +T+ +++ F +G+++ +++ K
Sbjct: 189 TYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGY 248
Query: 313 GFVQ 316
FV+
Sbjct: 249 SFVR 252
>gi|326526505|dbj|BAJ97269.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 124/250 (49%), Gaps = 27/250 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL ++++ + +F G VS +V R+ T S GY ++ F S A A R L+
Sbjct: 43 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEM 102
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ ++ R+ IF+ +L + + L +TF A + ++
Sbjct: 103 LNFT--PVNGKPIRIMYSNRDPSSRKSGAA---NIFIKNLDKSIDNKALYDTFSA-FGNI 156
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV T+ +G SKGYGFV++ + ++ E+NG+L + + + +GP K+
Sbjct: 157 LSCKVATE-MSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQ------ 209
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG---ELVHVKIPAGK- 310
+N GS P ++V L S T+D LK +FG +G ++ V+ GK
Sbjct: 210 ----ERENVFGS-----PKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKS 260
Query: 311 RC-GFVQFAN 319
RC GFV F N
Sbjct: 261 RCFGFVNFEN 270
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 83/186 (44%), Gaps = 15/186 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L E + +FG+ G S V+R S +GF+ F + A ++
Sbjct: 222 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGK-SRCFGFVNFENPDDAVHAVED 280
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTD-YV 182
NG + +E+ +L + + + D +++ +L V D
Sbjct: 281 LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEK 340
Query: 183 LQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
L+E F A + ++ KV+ D + G +KG GFV F + R++ MNG + ++P+ +
Sbjct: 341 LKELF-AEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVA 398
Query: 243 PAATKK 248
A K+
Sbjct: 399 LAQRKE 404
>gi|34015145|gb|AAQ56342.1| putative poly(A)-binding protein [Oryza sativa Japonica Group]
gi|125561054|gb|EAZ06502.1| hypothetical protein OsI_28747 [Oryza sativa Indica Group]
gi|125602953|gb|EAZ42278.1| hypothetical protein OsJ_26851 [Oryza sativa Japonica Group]
Length = 456
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 124/250 (49%), Gaps = 27/250 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL ++++ + +F G VS +V R+ T S GY ++ F S A A R L+
Sbjct: 40 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEM 99
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ ++ R+ IF+ +L + + L +TF +V+ ++
Sbjct: 100 LNFT--PINGKPIRIMYSNRDPSSRKSGAA---NIFIKNLDKSIDNKALYDTF-SVFGNI 153
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV T+ +G SKGYGFV+F E +++++NG+L + + + +GP
Sbjct: 154 LSCKVATE-MSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFV--------- 203
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI----PAGK 310
+K +N G +P ++V L S T+D LK +FG++G + V +
Sbjct: 204 -RKQERENVSG-----NPKFNNVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKS 257
Query: 311 RC-GFVQFAN 319
RC GFV F N
Sbjct: 258 RCFGFVNFEN 267
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 15/186 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L E + IFG G S V+R S +GF+ F + A R ++
Sbjct: 219 NVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGK-SRCFGFVNFENPDDAARAVED 277
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTD-YV 182
NG + +E+ L + D +++ +L + D
Sbjct: 278 LNGKKFDDKEWYVCRAQKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLDDSIDDDEK 337
Query: 183 LQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
L+E F A + ++ KV+ D G SKG GFV F + R++ MNG + ++P+ +
Sbjct: 338 LKEIF-ADFGTITSCKVMRD-LNGVSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVA 395
Query: 243 PAATKK 248
A K+
Sbjct: 396 LAQRKE 401
>gi|194910009|ref|XP_001982056.1| GG12380 [Drosophila erecta]
gi|190656694|gb|EDV53926.1| GG12380 [Drosophila erecta]
Length = 464
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 125/267 (46%), Gaps = 26/267 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++FG G S K+IR ++ Y FIE+ ++ AA L
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFGTMGPVKSCKIIREPG---NDPYAFIEYSNYQAATTALT 63
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N ++ ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLF--LDKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG----------- 242
+ ++V D T +SKGY FV F ++E ++ MNG +R +R
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 243 PAATKKAATGQQYQKATYQNTQGSQ--------GENDPNNTTIFVGGLDPSV-TDDILKT 293
P+ G +GSQ ++ P NTT++ GG P+V +DD++
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHK 240
Query: 294 VFGQYGELVHVKIPAGKRCGFVQFANR 320
F Q+G + V++ K F++F +
Sbjct: 241 HFVQFGPIQDVRVFKDKGFSFIKFVTK 267
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P +++GDL P +E + F GE + +++R+ T S+GY F+ F
Sbjct: 84 GNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSF 143
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT 153
V A AE +Q NG + S ++ R NW+T
Sbjct: 144 VKKAEAENAIQAMNGQWIGS--RSIRTNWST 172
>gi|16215606|emb|CAC95018.1| TIA-1 protein [Xenopus laevis]
Length = 388
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 131/258 (50%), Gaps = 16/258 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E I +F G S K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGN--DPYCFVEFFEHRHAAASLA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPD----------FTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ + F +FVGDL+ +++ +
Sbjct: 65 AINGRKILGKE--VKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEISTDDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TTG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQNT-QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A ++ Q T + ++ P+N T++ GG+ +++ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTFESNAKQLTYEEVVNQSSPSNCTVYCGGVTSGLSEQLMRQTFSPFGQIM 241
Query: 303 HVKIPAGKRCGFVQFANR 320
V++ K FV+F++
Sbjct: 242 EVRVFPDKGYSFVRFSSH 259
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 85/199 (42%), Gaps = 35/199 (17%)
Query: 59 TQPYGVAPDASSDGIRS---------LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNK 109
T P DA+S + S +++GDL P + I + F G +V+++
Sbjct: 82 TTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEISTDDIKAAFAPFGRISDARVVKDM 141
Query: 110 QTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWAT---------YGAGERR 160
T S+GYGF+ F + AE + G + + R NWAT + + ++
Sbjct: 142 TTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGG--RQIRTNWATRKPPAPKSTFESNAKQ 199
Query: 161 --------QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYG 212
Q + T++ G + + +++ ++++TF + + + +V D KGY
Sbjct: 200 LTYEEVVNQSSPSNCTVYCGGVTSGLSEQLMRQTF-SPFGQIMEVRVFPD------KGYS 252
Query: 213 FVRFGDESEQLRSMTEMNG 231
FVRF ++ +NG
Sbjct: 253 FVRFSSHESAAHAIVSVNG 271
>gi|410298560|gb|JAA27880.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 388
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 131/255 (51%), Gaps = 14/255 (5%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + +T ++ Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALA 66
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ Q F +FVGDL+ ++T +
Sbjct: 67 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 124
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 125 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 183
Query: 244 AATKKAATGQQYQKATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++
Sbjct: 184 ATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 243
Query: 303 HVKIPAGKRCGFVQF 317
+++ K FV+F
Sbjct: 244 EIRVFPDKGYSFVRF 258
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 110 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 169
Query: 136 NGTQMPSTEQNFRLNWAT---------YGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWAT Y + ++ Q + T++ G + + +
Sbjct: 170 GGQWLGGRQ--IRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGL 227
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 228 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNG 273
>gi|393216848|gb|EJD02338.1| polyadenylate binding protein [Fomitiporia mediterranea MF3/22]
Length = 701
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 135/294 (45%), Gaps = 30/294 (10%)
Query: 36 QHQTPVPPPVGWTPQP----VPPPSQQTQPYGVAP-DASSDGIRSLWIGDLQPWMEESYI 90
Q TP+P G P P P P + PY V P +S SL++G+L + E+ +
Sbjct: 13 QEHTPIPAQDGAAPAPQVVQPPAPVHASMPYSVPPASGASTPSASLYVGELDSTVTEAML 72
Query: 91 ASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLN 150
IF G S +V R+ T S GY ++ +++ A ER L+ N + + + R+
Sbjct: 73 FEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQLNYSLI--KNRACRIM 130
Query: 151 WATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKG 210
W+ R+ G IF+ +L + L +TF A + +V KV TD GRS+G
Sbjct: 131 WSQRDPALRKTGQG---NIFIKNLDEQIDHKALHDTF-AAFGNVLSCKVATDE-NGRSRG 185
Query: 211 YGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEN 270
+GFV + ++ +NG+L + + + +G +KK ++ + + Q SQ
Sbjct: 186 FGFVHYDTAEAADTAIKAVNGMLLNDKKVFVGHYISKK-------ERQAHIDEQKSQ--- 235
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP-----AGKRCGFVQFAN 319
T ++V LD VTDD +F ++GE+ + K GFV F +
Sbjct: 236 ---FTNLYVKNLDTEVTDDEFNDMFAKFGEVTSAVVQKDEEGKSKGFGFVNFKD 286
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 86/183 (46%), Gaps = 18/183 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+L++ +L + + +F GE V+ V++ + S+G+GF+ F H +A+ +
Sbjct: 238 NLYVKNLDTEVTDDEFNDMFAKFGE-VTSAVVQKDEEGKSKGFGFVNFKDHESAQAAVDA 296
Query: 135 FNGTQM-------------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDY 181
+ T++ E+ R ++ + + G + +++ +L D+ D
Sbjct: 297 LHDTELNGKKLFVTRAQKKAEREEELRKSYEQAKMEKLSKYQGAN--LYIKNLEDDMDDD 354
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
L+ F + ++ K++ D G SKG+GFV + E +++ EMN + ++P+ +
Sbjct: 355 KLRAEFEP-FGTITSCKIMRDEK-GTSKGFGFVCYSSPEEATKAVAEMNNKMLGSKPLYV 412
Query: 242 GPA 244
PA
Sbjct: 413 SPA 415
>gi|410922589|ref|XP_003974765.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Takifugu rubripes]
Length = 386
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 124/245 (50%), Gaps = 7/245 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I + N + Y F+EF H A L
Sbjct: 7 RTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGN--DPYCFVEFYEHRHAAASLA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT +++ D F +FVGDL+ ++T ++ F +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPTSQKK-DTSNHFHVFVGDLSPEITTDDVKAAF-GPFGR 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKT 180
Query: 254 QYQKATYQNT-QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Y+ + Q ++ P+N T++ GG+ +T+ +++ F +G ++ +++ K
Sbjct: 181 TYESNSKQLCFDDVVNQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGPIMEIRVFPDKGY 240
Query: 313 GFVQF 317
FV+F
Sbjct: 241 SFVRF 245
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + + + FG G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 97 VFVGDLSPEITTDDVKAAFGPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 136 NGTQMPSTEQNFRLNWA---------TYGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWA TY + ++ Q + T++ G ++ +
Sbjct: 157 GGQWLGGRQ--IRTNWATRKPPAPKTTYESNSKQLCFDDVVNQSSPSNCTVYCGGVSTGL 214
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 215 TEQLMRQTF-SPFGPIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNG 260
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 27/166 (16%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+DD P T++VG+L+ DVT+ ++ + F + K K++ D T + Y FV F +
Sbjct: 2 EDDQPR-TLYVGNLSRDVTEPLILQVFTQI-GPCKSCKMIVD--TAGNDPYCFVEFYEHR 57
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
S+ MNG + G++ K + T SQ ++ N+ +FVG
Sbjct: 58 HAAASLAAMNG----------------RKIMGKEV-KVNWATTPTSQKKDTSNHFHVFVG 100
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANR 320
L P +T D +K FG +G + ++ K GFV F N+
Sbjct: 101 DLSPEITTDDVKAAFGPFGRISDARVVKDMATGKSKGYGFVSFFNK 146
>gi|297307145|ref|NP_001167497.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Xenopus laevis]
gi|50416510|gb|AAH77169.1| Unknown (protein for MGC:78766) [Xenopus laevis]
Length = 385
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 131/258 (50%), Gaps = 16/258 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E I +F G S K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGN--DPYCFVEFFEHRHAAASLA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPD----------FTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ + F +FVGDL+ +++ +
Sbjct: 65 AINGRKILGKE--VKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEISTDDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TTG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQNT-QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A ++ Q T + ++ P+N T++ GG+ +++ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTFESNAKQLTYEEVVNQSSPSNCTVYCGGVTSGLSEQLMRQTFSPFGQIM 241
Query: 303 HVKIPAGKRCGFVQFANR 320
V++ K FV+F++
Sbjct: 242 EVRVFPDKGYSFVRFSSH 259
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 85/199 (42%), Gaps = 35/199 (17%)
Query: 59 TQPYGVAPDASSDGIRS---------LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNK 109
T P DA+S + S +++GDL P + I + F G +V+++
Sbjct: 82 TTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEISTDDIKAAFAPFGRISDARVVKDM 141
Query: 110 QTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWAT---------YGAGERR 160
T S+GYGF+ F + AE + G + + R NWAT + + ++
Sbjct: 142 TTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQ--IRTNWATRKPPAPKSTFESNAKQ 199
Query: 161 --------QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYG 212
Q + T++ G + + +++ ++++TF + + + +V D KGY
Sbjct: 200 LTYEEVVNQSSPSNCTVYCGGVTSGLSEQLMRQTF-SPFGQIMEVRVFPD------KGYS 252
Query: 213 FVRFGDESEQLRSMTEMNG 231
FVRF ++ +NG
Sbjct: 253 FVRFSSHESAAHAIVSVNG 271
>gi|448111139|ref|XP_004201770.1| Piso0_001971 [Millerozyma farinosa CBS 7064]
gi|359464759|emb|CCE88464.1| Piso0_001971 [Millerozyma farinosa CBS 7064]
Length = 655
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 115/220 (52%), Gaps = 34/220 (15%)
Query: 74 RSLWIGDLQPWMEESYIASI-FGHTGEFVSGKVIR--NKQTNF------SEGYGFIEFVS 124
R+LW+GDL PW++E+ IA + + + V+ K+IR + +T+F GY F+EF +
Sbjct: 124 RTLWMGDLDPWLDEAAIADLWYDVLKKRVNVKLIRPRSHKTDFPYHGVSHLGYCFVEFDN 183
Query: 125 HAAAERVLQTFNGTQMPST---------------EQNFRLNWATYGAGERRQDDGPDFTI 169
A+ L + NG +P + ++ FRLNWA + P+F++
Sbjct: 184 LYDAQLAL-SLNGKPLPESAMPSQKVRSRNQDNQKKYFRLNWANGATLDAPIIHTPEFSL 242
Query: 170 FVGDLAADVTDYVLQETFRAVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE 228
FVGDL+A T+ L F++ Y SVK +V+TD +G+S+ +GFVRF DE + +++ E
Sbjct: 243 FVGDLSASTTEAHLLAFFQSKYPESVKTVRVITDPVSGKSRCFGFVRFSDEHARSKALVE 302
Query: 229 MNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQG 268
M G R +R+ A+ K A NT GS G
Sbjct: 303 MQGTWFGGRQLRVALASPKTNAKA--------GNTNGSPG 334
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DP NTT+FVGGL V D L +F +G + VKIP GK CGF++++ R
Sbjct: 420 DPKNTTVFVGGLSSEVNDQTLFALFKPFGIIQQVKIPPGKNCGFIKYSKR 469
>gi|308801969|ref|XP_003078298.1| DNA-binding protein (ISS) [Ostreococcus tauri]
gi|116056749|emb|CAL53038.1| DNA-binding protein (ISS) [Ostreococcus tauri]
Length = 452
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 94/165 (56%), Gaps = 12/165 (7%)
Query: 162 DDG----PDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFG 217
DDG D+++FVGDL +DV + +L E F++ S+ A+VV D T R KGYGFV F
Sbjct: 187 DDGNVQTADYSVFVGDLGSDVNETILCEHFKSKCSTAHNARVVVDLKTFRPKGYGFVDFK 246
Query: 218 DESEQLRSMTEMNGVLC--STRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNT 275
E + + +++ G C S R MR+ A +K K + + + + DP NT
Sbjct: 247 TEKDYMTALSAFQGSRCGSSDRQMRVCNAFERKPEPVIDVTK--FHDFE----DMDPQNT 300
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
TIF+G LD +VT++ L+ VF ++GE+ + K K CGFV F +R
Sbjct: 301 TIFIGNLDHNVTEEHLRVVFEEFGEIAYAKATPKKGCGFVHFFDR 345
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 28/200 (14%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL + E+ + F + +V+ + +T +GYGF++F + L
Sbjct: 197 SVFVGDLGSDVNETILCEHFKSKCSTAHNARVVVDLKTFRPKGYGFVDFKTEKDYMTALS 256
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR-------------QDDGP-DFTIFVGDLAADVT 179
F G++ S+++ R+ A ER+ +D P + TIF+G+L +VT
Sbjct: 257 AFQGSRCGSSDRQMRV----CNAFERKPEPVIDVTKFHDFEDMDPQNTTIFIGNLDHNVT 312
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
+ L+ F + + AK KG GFV F D + ++ ++G + ++ +
Sbjct: 313 EEHLRVVFEE-FGEIAYAKATP------KKGCGFVHFFDRQDATEAIENLHGSMIGSKRV 365
Query: 240 RI--GPAATKKAATGQQYQK 257
R+ G K A YQ+
Sbjct: 366 RLSWGRHNATKCAIASMYQQ 385
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 10/126 (7%)
Query: 148 RLNWATYGAGERRQDDGPDFTIFVG-----DLAADVTDYVLQETFRAVYSSVKGAKVVTD 202
R WA G RR DDG + DL + YV F +V+ S+ K++ +
Sbjct: 27 RERWANARNGRRRVDDGRTRQVDRARGEERDLEKEDAAYVYY-AFSSVWKSLAHVKLIRN 85
Query: 203 RTTGRSKGYGFVRFG--DESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATY 260
R TG S+GYGF+ F DE++ L + ++G C R TK+ A T
Sbjct: 86 RATGLSEGYGFIEFNSRDEADSLSKL--LSGSQCRERCTVNEMMTTKEDAVKMYSAPTTP 143
Query: 261 QNTQGS 266
+ ++GS
Sbjct: 144 KQSEGS 149
>gi|348542282|ref|XP_003458614.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oreochromis
niloticus]
Length = 386
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 128/251 (50%), Gaps = 19/251 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +FG G S K+I + T + Y F+EF H A +
Sbjct: 7 KTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVD--TAGHDPYCFVEFYEHRHATATIA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKILGKE--VKVNWATTPTSQKK-DTSSHFHVFVGDLSPEITTDDIKAAF-APFGK 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ +VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 121 ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAP--- 177
Query: 254 QYQKATYQNTQGSQ-------GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
K T + T Q ++ P+N T++ GG+ +T+ I++ F +G+++ +++
Sbjct: 178 ---KTTSETTNTKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGQIMEIRV 234
Query: 307 PAGKRCGFVQF 317
K FV+F
Sbjct: 235 FPEKGYSFVRF 245
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 74/173 (42%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G+ +V+++ T S+GYGF+ F + AE +Q
Sbjct: 97 VFVGDLSPEITTDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 136 NGTQMPSTEQNFRLNWATYGAGER-----------------RQDDGPDFTIFVGDLAADV 178
G + + R NWAT + Q + T++ G + +
Sbjct: 157 GGQWLGG--RQIRTNWATRKPAPKTTSETTNTKQLSFDEVVNQSSPSNCTVYCGGVTTGL 214
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + +V + KGY FVRF ++ +NG
Sbjct: 215 TEQIMRQTFSP-FGQIMEIRVFPE------KGYSFVRFNSHEAAAHAIVSVNG 260
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 27/165 (16%)
Query: 162 DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
DD P T++VG+L+ DVT+ ++ E F + K K++ D T Y FV F +
Sbjct: 3 DDQPK-TLYVGNLSRDVTEALILELFGQI-GPCKSCKMIVD--TAGHDPYCFVEFYEHRH 58
Query: 222 QLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGG 281
++ MNG + +++ A T SQ ++ ++ +FVG
Sbjct: 59 ATATIAAMNGRKILGKEVKVNWATTPT-----------------SQKKDTSSHFHVFVGD 101
Query: 282 LDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANR 320
L P +T D +K F +G++ ++ K GFV F N+
Sbjct: 102 LSPEITTDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSFFNK 146
>gi|226290334|gb|EEH45818.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Paracoccidioides brasiliensis Pb18]
Length = 508
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 155/350 (44%), Gaps = 45/350 (12%)
Query: 5 PPSQPSDQTSQYQQQHQQWMAYQQQSQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGV 64
PP QPS QQQ QQ Q S Q + + +PPP P +P Q T P
Sbjct: 15 PPPQPSAGAPGQQQQQQQQFDGSQGSNNSQGGNPSHMPPPP-LAPVVIP---QNTNPIPT 70
Query: 65 APDASSDGIRSLWIGDLQPWMEESYIAS------IFGHTGEFVSGKVIRNKQTNFSEGYG 118
A +S +R + + W+ S + IF TG S K+I +K + YG
Sbjct: 71 A--ITSPNVRQYDVTYFRRWLCASCGSGTKQARPIFETTGHVQSVKIIPDKNSK-GLNYG 127
Query: 119 FIEFVSHAAAERVLQTFNGTQMPST------------EQNFRLNWATYGAGERRQDDGPD 166
F+E+ AAER + T NG ++ + +Q R+NWA ++D
Sbjct: 128 FVEYDDPGAAERAMATLNGRRVHQSNYDIRSLKPHPLQQEIRVNWAYQSNSNNKEDTSNH 187
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
F IFVGDL+ +V D VL + F A + SV A+V+ D TGRS+GYGFV F + S+ +++
Sbjct: 188 FHIFVGDLSNEVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFRERSDAEKAL 246
Query: 227 TEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN-------------TQGSQGEN--- 270
+ M+G +R +R A K + Q Q T G Q +
Sbjct: 247 SSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVV 306
Query: 271 --DPN-NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
P TT +VG L P T + L +F +G +V + A + FV+
Sbjct: 307 AQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRFQADRGFAFVKM 356
>gi|125775095|ref|XP_001358799.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|195144954|ref|XP_002013461.1| GL24152 [Drosophila persimilis]
gi|54638540|gb|EAL27942.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|194102404|gb|EDW24447.1| GL24152 [Drosophila persimilis]
Length = 464
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 126/268 (47%), Gaps = 28/268 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++FG G + K+IR ++ Y FIE+ ++ AA L
Sbjct: 7 KTLYVGNLDSSVSEELLIALFGTMGAVKNCKIIREPG---NDPYAFIEYSNYQAASTALT 63
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N E+ ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLF--LEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ ++V D T +SKGY FV F ++E ++ MNG +R +R +T+K +
Sbjct: 121 ISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTN-WSTRKLPPPR 179
Query: 254 QYQKATYQNTQGSQ--------------------GENDPNNTTIFVGGLDPSV-TDDILK 292
+ K ++ P NTT++ GG P+V +DD++
Sbjct: 180 ESSKGGGLGGGMGGGPGNGGGVKSNQRHTFDEVYNQSSPTNTTVYCGGFPPNVISDDLMH 239
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQFANR 320
FGQ+G + V++ K F++F +
Sbjct: 240 KHFGQFGPIQDVRVFKDKGFAFIKFVTK 267
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P +++GDL P +E + F GE + +++R+ QT S+GY F+ F
Sbjct: 84 GNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSF 143
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT 153
V A AE +Q NG + S ++ R NW+T
Sbjct: 144 VKKAEAENAIQAMNGQWIGS--RSIRTNWST 172
>gi|357437769|ref|XP_003589160.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355478208|gb|AES59411.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 647
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 139/294 (47%), Gaps = 42/294 (14%)
Query: 32 QQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIR-SLWIGDLQPWMEESYI 90
Q Q QHQTP P VP PS GV P+ ++ + SL++GDL+ + +S +
Sbjct: 3 QIQVQHQTPAP---------VPAPSN-----GVVPNVANQFVTTSLYVGDLEVNVNDSQL 48
Query: 91 ASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLN 150
+F G+ VS +V R+ T S GYG++ F + A R L N T P ++ R+
Sbjct: 49 YDLFNQVGQVVSVRVCRDLATRRSLGYGYVNFTNPQDAARALDVLNFT--PMNNKSIRVM 106
Query: 151 WATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKG 210
++ R+ IF+ +L + L +TF + + + K+ TD +G+SKG
Sbjct: 107 YSHRDPSSRKSGTA---NIFIKNLDKTIDHKALHDTFSS-FGQIMSCKIATD-GSGQSKG 161
Query: 211 YGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEN 270
YGFV+F E ++ ++NG+L + + + +G +K K + N
Sbjct: 162 YGFVQFEAEDSAQNAIDKLNGMLINDKQVFVG-HFLRKQDRDNVLSKTKFNN-------- 212
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGEL---VHVKIPAGK-RC-GFVQFAN 319
++V L S T+D LK FG YG + V ++ G+ +C GFV F N
Sbjct: 213 ------VYVKNLSESFTEDDLKNEFGAYGTITSAVLMRDADGRSKCFGFVNFEN 260
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 125/264 (47%), Gaps = 23/264 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P + G +++I +L ++ + F G+ +S K+ + S+GYGF++F +
Sbjct: 112 PSSRKSGTANIFIKNLDKTIDHKALHDTFSSFGQIMSCKIATDGSGQ-SKGYGFVQFEAE 170
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT------IFVGDLAADVT 179
+A+ + NG + + +Q F G R+QD + ++V +L+ T
Sbjct: 171 DSAQNAIDKLNGMLI-NDKQVF------VGHFLRKQDRDNVLSKTKFNNVYVKNLSESFT 223
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
+ L+ F A Y ++ A ++ D GRSK +GFV F + + +++ +NG +
Sbjct: 224 EDDLKNEFGA-YGTITSAVLMRD-ADGRSKCFGFVNFENAEDAAKAVEALNGKKVDDKEW 281
Query: 240 RIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
+G A +K + +Q K ++ T + +++ LD S+TD+ LK +F ++G
Sbjct: 282 YVGKA--QKKSEREQELKGRFEQTVKESVVDKFQGLNLYLKNLDDSITDEKLKEMFSEFG 339
Query: 300 ELVHVKI---PAG--KRCGFVQFA 318
+ KI P G + GFV F+
Sbjct: 340 TITSYKIMRDPNGVSRGSGFVAFS 363
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 27/198 (13%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S ++++ +L E + + FG G S ++R+ S+ +GF+ F + A
Sbjct: 206 SKTKFNNVYVKNLSESFTEDDLKNEFGAYGTITSAVLMRDADGR-SKCFGFVNFENAEDA 264
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGA---GERRQ---------------DDGPDFTIF 170
+ ++ NG ++ E W A ER Q D ++
Sbjct: 265 AKAVEALNGKKVDDKE------WYVGKAQKKSEREQELKGRFEQTVKESVVDKFQGLNLY 318
Query: 171 VGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMN 230
+ +L +TD L+E F + + ++ K++ D G S+G GFV F E R++ EMN
Sbjct: 319 LKNLDDSITDEKLKEMF-SEFGTITSYKIMRD-PNGVSRGSGFVAFSTPEEASRALGEMN 376
Query: 231 GVLCSTRPMRIGPAATKK 248
G + ++P+ + A K+
Sbjct: 377 GKMIVSKPLYVAVAQRKE 394
>gi|24649513|ref|NP_732942.1| Rox8, isoform B [Drosophila melanogaster]
gi|24649515|ref|NP_732943.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301090|gb|AAF56224.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301091|gb|AAF56225.1| Rox8, isoform B [Drosophila melanogaster]
Length = 464
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 124/267 (46%), Gaps = 26/267 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++F G S K+IR ++ Y FIE+ ++ AA L
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPG---NDPYAFIEYSNYQAATTALT 63
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N E+ ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLF--LEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG----------- 242
+ ++V D T +SKGY FV F ++E ++ MNG +R +R
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 243 PAATKKAATGQQYQKATYQNTQGSQ--------GENDPNNTTIFVGGLDPSV-TDDILKT 293
P+ G +GSQ ++ P NTT++ GG P+V +DD++
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHK 240
Query: 294 VFGQYGELVHVKIPAGKRCGFVQFANR 320
F Q+G + V++ K F++F +
Sbjct: 241 HFVQFGPIQDVRVFKDKGFSFIKFVTK 267
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P +++GDL P +E + F GE + +++R+ T S+GY F+ F
Sbjct: 84 GNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSF 143
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT 153
V A AE +Q NG + S ++ R NW+T
Sbjct: 144 VKKAEAENAIQAMNGQWIGS--RSIRTNWST 172
>gi|321461699|gb|EFX72729.1| hypothetical protein DAPPUDRAFT_308097 [Daphnia pulex]
Length = 336
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 95/174 (54%), Gaps = 10/174 (5%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLWIG L+P+M E ++ F GE KV+RNK T G+GF +F A VL
Sbjct: 8 SLWIGGLEPYMTEEFLMRSFELMGEKPEAIKVMRNKHTGLPAGFGFCQFRDEKQAMEVLH 67
Query: 134 TFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P ++ F+LN +T G D ++VGDL+ADV DY L + F A Y
Sbjct: 68 KLNGKIIPYSQPPSRFKLNHSTNTKGST-----ADHALWVGDLSADVDDYGLYKCFSAKY 122
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPA 244
+SV+ AKVV + G S+GY FV F +ES+ ++T M G + P+R+ A
Sbjct: 123 NSVQLAKVVRG-SNGESRGYAFVNFSNESDYKDALTHMQGHRGLGSNPLRVSLA 175
>gi|24649519|ref|NP_732945.1| Rox8, isoform D [Drosophila melanogaster]
gi|442620772|ref|NP_732944.2| Rox8, isoform E [Drosophila melanogaster]
gi|442620774|ref|NP_001262897.1| Rox8, isoform G [Drosophila melanogaster]
gi|442620776|ref|NP_001262898.1| Rox8, isoform H [Drosophila melanogaster]
gi|23172126|gb|AAN13978.1| Rox8, isoform D [Drosophila melanogaster]
gi|211938549|gb|ACJ13171.1| FI04408p [Drosophila melanogaster]
gi|440217818|gb|AAN13977.2| Rox8, isoform E [Drosophila melanogaster]
gi|440217819|gb|AGB96277.1| Rox8, isoform G [Drosophila melanogaster]
gi|440217820|gb|AGB96278.1| Rox8, isoform H [Drosophila melanogaster]
Length = 470
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 124/267 (46%), Gaps = 26/267 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++F G S K+IR ++ Y FIE+ ++ AA L
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPG---NDPYAFIEYSNYQAATTALT 63
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N E+ ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLF--LEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG----------- 242
+ ++V D T +SKGY FV F ++E ++ MNG +R +R
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 243 PAATKKAATGQQYQKATYQNTQGSQ--------GENDPNNTTIFVGGLDPSV-TDDILKT 293
P+ G +GSQ ++ P NTT++ GG P+V +DD++
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHK 240
Query: 294 VFGQYGELVHVKIPAGKRCGFVQFANR 320
F Q+G + V++ K F++F +
Sbjct: 241 HFVQFGPIQDVRVFKDKGFSFIKFVTK 267
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P +++GDL P +E + F GE + +++R+ T S+GY F+ F
Sbjct: 84 GNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSF 143
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT 153
V A AE +Q NG + S ++ R NW+T
Sbjct: 144 VKKAEAENAIQAMNGQWIGS--RSIRTNWST 172
>gi|41054740|ref|NP_957426.1| nucleolysin TIAR [Danio rerio]
gi|33416339|gb|AAH55501.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Danio
rerio]
Length = 370
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 132/249 (53%), Gaps = 9/249 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G S K+I +N + Y F+EF H A L
Sbjct: 8 KTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSN--DPYCFVEFFEHRDAAAALA 65
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 66 AMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTDDIRAAF-APFGK 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TTG+SKGYGFV F ++ + ++ M G R +R AT+K +
Sbjct: 122 ISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTN-WATRKPPAPK 180
Query: 254 QYQKATYQNTQGSQ--GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKR 311
Q + + + + ++ P N T++ GG+ +T+ +++ F +G+++ +++ K
Sbjct: 181 SVQDNSAKQLRFDEVVNQSSPQNCTVYCGGIQSGLTEHLMRQTFSPFGQIMEIRVFPEKG 240
Query: 312 CGFVQFANR 320
F++F++
Sbjct: 241 YSFIRFSSH 249
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 26/166 (15%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+D+ T++VG+L+ DVT+ ++ + F + K K++T+ T+ + Y FV F +
Sbjct: 2 EDESHPKTLYVGNLSRDVTENLILQLFTQI-GPCKSCKMITEHTS--NDPYCFVEFFEHR 58
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
+ ++ MNG + G++ K + T SQ ++ N+ +FVG
Sbjct: 59 DAAAALAAMNG----------------RKILGKEV-KVNWATTPSSQKKDTSNHFHVFVG 101
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANR 320
L P +T D ++ F +G++ ++ K GFV F N+
Sbjct: 102 DLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNK 147
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 98 VFVGDLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHM 157
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDGP---------------DFTIFVGDLAADV 178
G + + R NWAT A + QD+ + T++ G + + +
Sbjct: 158 GGQWLGGRQ--IRTNWATRKPPAPKSVQDNSAKQLRFDEVVNQSSPQNCTVYCGGIQSGL 215
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T++++++TF + + + +V + KGY F+RF ++ +NG
Sbjct: 216 TEHLMRQTF-SPFGQIMEIRVFPE------KGYSFIRFSSHESAAHAIVSVNG 261
>gi|432884715|ref|XP_004074554.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 129/251 (51%), Gaps = 19/251 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +FG G S K+I + T + Y F+EF H A +
Sbjct: 7 KTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVD--TAGHDPYCFVEFYEHRHATATIA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKILGKE--VKVNWATTPTSQKK-DTSSHFHVFVGDLSPEITTDDIKAAF-APFGK 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ +VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 121 ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAP--- 177
Query: 254 QYQKATYQNTQGSQ-------GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
K T +++ Q ++ P+N T++ GG+ +T+ I++ F +G+++ +++
Sbjct: 178 ---KTTNESSSSKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGQIMEIRV 234
Query: 307 PAGKRCGFVQF 317
K FV+F
Sbjct: 235 FPEKGYSFVRF 245
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 74/173 (42%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G+ +V+++ T S+GYGF+ F + AE +Q
Sbjct: 97 VFVGDLSPEITTDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 136 NGTQMPSTEQNFRLNWATYGAGER-----------------RQDDGPDFTIFVGDLAADV 178
G + + R NWAT + Q + T++ G + +
Sbjct: 157 GGQWLGG--RQIRTNWATRKPAPKTTNESSSSKQLSFDEVVNQSSPSNCTVYCGGVTTGL 214
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + +V + KGY FVRF ++ +NG
Sbjct: 215 TEQIMRQTFSP-FGQIMEIRVFPE------KGYSFVRFNSHEAAAHAIVSVNG 260
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 26/165 (15%)
Query: 162 DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
DD T++VG+L+ DVT+ ++ E F + K K++ D T Y FV F +
Sbjct: 2 DDEQPKTLYVGNLSRDVTEALILELFGQI-GPCKSCKMIVD--TAGHDPYCFVEFYEHRH 58
Query: 222 QLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGG 281
++ MNG + G++ K + T SQ ++ ++ +FVG
Sbjct: 59 ATATIAAMNG----------------RKILGKEV-KVNWATTPTSQKKDTSSHFHVFVGD 101
Query: 282 LDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANR 320
L P +T D +K F +G++ ++ K GFV F N+
Sbjct: 102 LSPEITTDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSFFNK 146
>gi|6755783|ref|NP_035715.1| nucleolysin TIA-1 isoform 1 [Mus musculus]
gi|1729966|sp|P52912.1|TIA1_MOUSE RecName: Full=Nucleolysin TIA-1; AltName: Full=RNA-binding protein
TIA-1; AltName: Full=T-cell-restricted intracellular
antigen-1; Short=TIA-1
gi|437057|gb|AAA03711.1| TIA [Mus musculus]
gi|1616673|gb|AAC52871.1| RNA binding protein TIA-1 [Mus musculus]
gi|26353510|dbj|BAC40385.1| unnamed protein product [Mus musculus]
gi|74188216|dbj|BAE25782.1| unnamed protein product [Mus musculus]
gi|148666751|gb|EDK99167.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_a
[Mus musculus]
Length = 386
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 131/258 (50%), Gaps = 16/258 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ Q F +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ T Q + ++ PNN T++ GG+ +T+ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 303 HVKIPAGKRCGFVQFANR 320
+++ K FV+F++
Sbjct: 242 EIRVFPDKGYSFVRFSSH 259
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 136 NGTQMPSTEQNFRLNWAT---------YGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWAT Y + ++ Q + T++ G + + +
Sbjct: 168 GGQWLGGRQ--IRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGL 225
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 226 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSVNG 271
>gi|194742700|ref|XP_001953839.1| GF17967 [Drosophila ananassae]
gi|190626876|gb|EDV42400.1| GF17967 [Drosophila ananassae]
Length = 471
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 129/269 (47%), Gaps = 29/269 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++F G S K+IR ++ Y FIE+ ++ AA L
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGHVKSCKIIREPG---NDPYAFIEYSTYQAATTALT 63
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N ++ ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLF--LDKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ ++V D T +SKGY FV F ++E ++T MNG +R +R +T+K +
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAITAMNGQWIGSRSIRTN-WSTRKLPPPR 179
Query: 254 QYQK-------------ATYQNTQGSQ--------GENDPNNTTIFVGGLDPSV-TDDIL 291
+ K +GSQ ++ P NTT++ GG P+V +DD++
Sbjct: 180 EPNKGGGQGGGMGGGPGGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLM 239
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQFANR 320
F Q+G + V++ K F++F +
Sbjct: 240 HKHFVQFGPIQDVRVFKDKGFAFIKFVTK 268
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P +++GDL P +E + F GE + +++R+ T S+GY F+ F
Sbjct: 84 GNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSF 143
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT 153
V A AE + NG + S ++ R NW+T
Sbjct: 144 VKKAEAENAITAMNGQWIGS--RSIRTNWST 172
>gi|348522243|ref|XP_003448635.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Oreochromis niloticus]
Length = 387
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 125/250 (50%), Gaps = 17/250 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I + N + Y F+EF H A L
Sbjct: 8 RTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGN--DPYCFVEFYDHRHAAASLA 65
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT +++ D F +FVGDL+ ++T ++ F +
Sbjct: 66 AMNGRKIMGKE--VKVNWATTPTSQKK-DTSNHFHVFVGDLSPEITTEDVKAAF-GPFGR 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ M G R +R A K A
Sbjct: 122 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRKPPAP-- 179
Query: 254 QYQKATYQNTQGSQ------GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP 307
K T++N ++ P+N T++ GG+ +T+ +++ F +G+++ V++
Sbjct: 180 ---KTTHENNSKHLSFDEVVNQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGQIMEVRVF 236
Query: 308 AGKRCGFVQF 317
K FV+F
Sbjct: 237 PDKGYSFVRF 246
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 27/166 (16%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+DD P T++VG+L+ DVT+ ++ + F + K K++ D T + Y FV F D
Sbjct: 3 EDDQPR-TLYVGNLSRDVTEPLILQVFTQI-GPCKSCKMIVD--TAGNDPYCFVEFYDHR 58
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
S+ MNG + G++ K + T SQ ++ N+ +FVG
Sbjct: 59 HAAASLAAMNG----------------RKIMGKEV-KVNWATTPTSQKKDTSNHFHVFVG 101
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANR 320
L P +T + +K FG +G + ++ K GFV F N+
Sbjct: 102 DLSPEITTEDVKAAFGPFGRISDARVVKDMATGKSKGYGFVSFFNK 147
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 76/173 (43%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + + + FG G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 98 VFVGDLSPEITTEDVKAAFGPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHM 157
Query: 136 NGTQMPSTEQNFRLNWATYGAGERR-----------------QDDGPDFTIFVGDLAADV 178
G + + R NWAT + Q + T++ G ++ +
Sbjct: 158 GGQWLGGRQ--IRTNWATRKPPAPKTTHENNSKHLSFDEVVNQSSPSNCTVYCGGVSTGL 215
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 216 TEQLMRQTF-SPFGQIMEVRVFPD------KGYSFVRFNSHESAAHAIVSVNG 261
>gi|17944383|gb|AAL48083.1| RE71384p [Drosophila melanogaster]
Length = 470
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 124/267 (46%), Gaps = 26/267 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++F G S K+IR ++ Y FIE+ ++ AA L
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPG---NDPYAFIEYSNYQAATTALT 63
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N E+ ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLF--LEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG----------- 242
+ ++V D T +SKGY FV F ++E ++ MNG +R +R
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 243 PAATKKAATGQQYQKATYQNTQGSQ--------GENDPNNTTIFVGGLDPSV-TDDILKT 293
P+ G +GSQ ++ P NTT++ GG P+V +DD++
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHK 240
Query: 294 VFGQYGELVHVKIPAGKRCGFVQFANR 320
F Q+G + V++ K F++F +
Sbjct: 241 HFVQFGPIQDVRVFKDKGFSFIKFVTK 267
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P +++GDL P +E + F GE + +++R+ T S+GY F+ F
Sbjct: 84 GNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSF 143
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT 153
V A AE +Q NG + S ++ R NW+T
Sbjct: 144 VKKAEAENAIQAMNGQWIGS--RSIRTNWST 172
>gi|226500040|ref|NP_001150056.1| LOC100283683 [Zea mays]
gi|195636346|gb|ACG37641.1| nucleolysin TIAR [Zea mays]
Length = 421
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 141/296 (47%), Gaps = 30/296 (10%)
Query: 43 PPV--GWTPQPVPPPSQQTQPY---GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHT 97
PP G P P + Q +P + P S RS+++G++ + ++ + +F
Sbjct: 39 PPFFPGHHPHPGLLAAPQIEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDTVLQEVFQSI 98
Query: 98 GEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAG 157
G K+IR ++++F GFI++ A + + NG Q+ Q ++NWA
Sbjct: 99 GPVEGCKLIRKEKSSF----GFIDYYDRRYAALAILSLNGRQL--YGQPIKVNWAY--TS 150
Query: 158 ERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFG 217
R+D F IFVGDL +VTD L F YS+ A+V+ D+ TGRS+G+GFV F
Sbjct: 151 TPREDTSGHFNIFVGDLCPEVTDATLFAFFSG-YSTCSDARVMWDQKTGRSRGFGFVSFR 209
Query: 218 DESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQGENDPN 273
++ + ++ ++NG R +R ATK A G++ Q K N G+ +PN
Sbjct: 210 NQQDAQSAINDLNGKWLGNRQIRCN-WATKGANAGEEKQILDTKVDLSNGSSESGKENPN 268
Query: 274 N---------TTIFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFA 318
+ TT++VG L T + + F G + V++ K GFV+++
Sbjct: 269 DDGPENNPQFTTVYVGNLPHEATMNDVHLFFHSLGAGSIEEVRVTRDKGFGFVRYS 324
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 35/215 (16%)
Query: 55 PSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFS 114
P + Y P + G ++++GDL P + ++ + + F +V+ +++T S
Sbjct: 141 PIKVNWAYTSTPREDTSGHFNIFVGDLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGRS 200
Query: 115 EGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA--GERRQ----------- 161
G+GF+ F + A+ + NG + + R NWAT GA GE +Q
Sbjct: 201 RGFGFVSFRNQQDAQSAINDLNGKWL--GNRQIRCNWATKGANAGEEKQILDTKVDLSNG 258
Query: 162 ----------DDGPD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTG 206
DDGP+ T++VG+L + T + F ++ GA + +
Sbjct: 259 SSESGKENPNDDGPENNPQFTTVYVGNLPHEATMNDVHLFFHSL-----GAGSIEEVRVT 313
Query: 207 RSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
R KG+GFVR+ E ++ NG L R ++
Sbjct: 314 RDKGFGFVRYSTHEEAALAIQMGNGQLIGGRQIKC 348
>gi|427789733|gb|JAA60318.1| Putative rox8 [Rhipicephalus pulchellus]
Length = 406
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 121/252 (48%), Gaps = 11/252 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E + ++FG G+ K+I ++ Y F+EF H +A L
Sbjct: 13 RTLYVGNLDTAVTEELLVAVFGQMGQVKGCKIIHEPG---NDPYCFVEFSDHQSAASALL 69
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N E ++NWAT + D IFVGDL+ ++ L++ F A +
Sbjct: 70 AMNKRLCFGKE--MKVNWATSPGNTPKLDTSKHHHIFVGDLSPEIETTQLRDAF-APFGD 126
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ +VV D T +SKGYGFV F +++ ++ MNG +R +R A K A
Sbjct: 127 ISDCRVVRDPQTLKSKGYGFVSFVKKADAENAIGTMNGQWLGSRAIRTNWATRKPPANRT 186
Query: 254 QYQKATYQNTQ-----GSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA 308
Q + +T+ ++ P N T++ GG+ +++++++ F YG + +++
Sbjct: 187 QAEVDITTSTKPLTFDEVYNQSSPTNCTVYCGGITQGLSEELMQKTFSSYGAIQEIRVFK 246
Query: 309 GKRCGFVQFANR 320
K F++F +
Sbjct: 247 DKGYAFIRFGTK 258
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 37/201 (18%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + + F G+ +V+R+ QT S+GYGF+ F
Sbjct: 90 GNTPKLDTSKHHHIFVGDLSPEIETTQLRDAFAPFGDISDCRVVRDPQTLKSKGYGFVSF 149
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR---------------------Q 161
V A AE + T NG + S + R NWAT R Q
Sbjct: 150 VKKADAENAIGTMNGQWLGS--RAIRTNWATRKPPANRTQAEVDITTSTKPLTFDEVYNQ 207
Query: 162 DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
+ T++ G + +++ ++Q+TF + Y +++ +V D KGY F+RFG +
Sbjct: 208 SSPTNCTVYCGGITQGLSEELMQKTFSS-YGAIQEIRVFKD------KGYAFIRFGTKEA 260
Query: 222 QLRSM-----TEMNG--VLCS 235
++ +++NG V CS
Sbjct: 261 ATHAIVATHNSDVNGQTVKCS 281
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 270 NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKRCGFVQFANR 320
ND T++VG LD +VT+++L VFGQ G++ KI P FV+F++
Sbjct: 8 NDCQPRTLYVGNLDTAVTEELLVAVFGQMGQVKGCKIIHEPGNDPYCFVEFSDH 61
>gi|448520574|ref|XP_003868310.1| Ngr1 protein [Candida orthopsilosis Co 90-125]
gi|380352650|emb|CCG25406.1| Ngr1 protein [Candida orthopsilosis]
Length = 696
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 125/241 (51%), Gaps = 33/241 (13%)
Query: 54 PPSQQTQPYGVAP--DASSDGI----RSLWIGDLQPWMEESYIASIFGH---------TG 98
PP TQ VA D+ S GI R+LW+GDL W++E I ++ +
Sbjct: 80 PPISTTQSNAVAAEQDSISGGISEQPRTLWMGDLDSWLDEKQITDLWWNLLKKKVVVKII 139
Query: 99 EFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPST--------------- 143
+ + K+ Q + GY F+EF + A++ L + NG +P
Sbjct: 140 KPKTLKLDPQFQGLTNSGYCFVEFETFEDAQQAL-SLNGQLLPDIAMPSQQVYPNNPDNQ 198
Query: 144 EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY-SSVKGAKVVTD 202
++ FRLNWA+ P++++FVGDL+A T+ L F+ + +S+K +V+TD
Sbjct: 199 KKYFRLNWASGATLSAPIVQMPEYSLFVGDLSASTTEAHLLAFFQKKFPNSIKTVRVMTD 258
Query: 203 RTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN 262
+G+S+ +GFVRF +ESE+ R++ EMNGV + RP+R+ AT ++ +++ K+ N
Sbjct: 259 PVSGKSRCFGFVRFTEESERQRALNEMNGVWFAGRPLRVA-LATPRSTNYRKFGKSNNNN 317
Query: 263 T 263
Sbjct: 318 N 318
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%)
Query: 256 QKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFV 315
Q+A+ Q S +DPNNTT+FVGGL VT+ L T+F +G + +KIP GK CGFV
Sbjct: 407 QQASLQPPISSPQYSDPNNTTVFVGGLSSEVTEATLFTLFKPFGVIQQIKIPPGKNCGFV 466
Query: 316 QFANR 320
+++ R
Sbjct: 467 KYSTR 471
>gi|242010197|ref|XP_002425859.1| Nucleolysin TIAR, putative [Pediculus humanus corporis]
gi|212509811|gb|EEB13121.1| Nucleolysin TIAR, putative [Pediculus humanus corporis]
Length = 295
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 96/177 (54%), Gaps = 8/177 (4%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+ +M ES++ + F GE + K++RN+ T GY F+ F S A V+
Sbjct: 7 LWMGSLESYMTESFLMNAFVKMGESPTAIKIMRNRLTGEQAGYCFVHFTSDEIARTVMHK 66
Query: 135 FNGTQMPSTEQNFRLNWATYGAGER---RQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P++ R G R QD +++++VGDL+ D+ DY L + F + Y
Sbjct: 67 LNGKVIPNSSPPVRFKLNHAGPNNRPVVGQD--KEYSLWVGDLSPDIDDYTLYKCFASRY 124
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
S++ AKVV D + G SKGY F+RF E EQ +MNG +RP+++ A K
Sbjct: 125 QSIRTAKVVLD-SAGFSKGYAFIRFASEEEQKNCCIQMNGFKGLGSRPIKVSGAVPK 180
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 30/72 (41%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P D SLW+GDL P +++ + F + + + FS+GY FI F S
Sbjct: 92 PVVGQDKEYSLWVGDLSPDIDDYTLYKCFASRYQSIRTAKVVLDSAGFSKGYAFIRFASE 151
Query: 126 AAAERVLQTFNG 137
+ NG
Sbjct: 152 EEQKNCCIQMNG 163
>gi|326492626|dbj|BAJ90169.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511122|dbj|BAJ87575.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 123/249 (49%), Gaps = 27/249 (10%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
L++GDL ++++ + +F G VS +V R+ T S GY ++ F S A A R L+
Sbjct: 44 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 103
Query: 136 NGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVK 195
N T P + R+ ++ R+ IF+ +L + + L +TF A + ++
Sbjct: 104 NFT--PVNGKPIRIMYSNRDPSSRKSGAA---NIFIKNLDKSIDNKALYDTFSA-FGNIL 157
Query: 196 GAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQY 255
KV T+ +G SKGYGFV++ + ++ E+NG+L + + + +GP K+
Sbjct: 158 SCKVATE-MSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQ------- 209
Query: 256 QKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG---ELVHVKIPAGK-R 311
+N GS P ++V L S T+D LK +FG +G ++ V+ GK R
Sbjct: 210 ---ERENVFGS-----PKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSR 261
Query: 312 C-GFVQFAN 319
C GFV F N
Sbjct: 262 CFGFVNFEN 270
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 83/186 (44%), Gaps = 15/186 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L E + +FG+ G S V+R S +GF+ F + A ++
Sbjct: 222 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGK-SRCFGFVNFENPDDAVHAVED 280
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTD-YV 182
NG + +E+ +L + + + D +++ +L V D
Sbjct: 281 LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEK 340
Query: 183 LQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
L+E F A + ++ KV+ D + G +KG GFV F + R++ MNG + ++P+ +
Sbjct: 341 LKELF-AEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVA 398
Query: 243 PAATKK 248
A K+
Sbjct: 399 LAQRKE 404
>gi|67465872|ref|XP_649094.1| RNA-binding protein TIA-1 [Entamoeba histolytica HM-1:IMSS]
gi|56465456|gb|EAL43711.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449705857|gb|EMD45818.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica KU27]
Length = 306
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 143/289 (49%), Gaps = 15/289 (5%)
Query: 30 SQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESY 89
++Q ++Q P P + +P S +T + +A+S +S+ + + ++E
Sbjct: 2 TRQYDSRYQYPPRAPQLYQQRPPQQSSTETTESSLPINANS---KSVHVSGIHESVDEIL 58
Query: 90 IASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRL 149
+ IF G VS K++R+K + GYGF+EFV A +G + E ++
Sbjct: 59 LGRIFSIVGHVVSCKIMRDK-SGVHAGYGFVEFVDSTTARFAKDNMDGRVVYGRE--LKV 115
Query: 150 NWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSK 209
NW+ Y A +Q++ ++ IFVG L +V D +L +TF+ + V A+V+ TG+SK
Sbjct: 116 NWS-YTA---QQENQGNYKIFVGGLQPEVNDDLLYKTFQK-FGRVTDARVLKFTQTGKSK 170
Query: 210 GYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGE 269
GYGFV F + + +M MNG R +++ + A+ +Q K +Y E
Sbjct: 171 GYGFVTFIRKEDAETAMQMMNGEKLEGRNIKVNWVTSNIASKTEQ-PKRSYDEI---NNE 226
Query: 270 NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFA 318
N T+++G + +V D LK + +YG + V++ K F++F+
Sbjct: 227 TSSQNCTVYIGNIPKNVESDDLKQLLAEYGSIEEVRLNKDKGYAFIKFS 275
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 80/177 (45%), Gaps = 21/177 (11%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++G LQP + + + F G +V++ QT S+GYGF+ F+ AE +Q
Sbjct: 131 IFVGGLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAMQMM 190
Query: 136 NGTQMPSTEQNFRLNWATYGAGER------------RQDDGPDFTIFVGDLAADVTDYVL 183
NG ++ +N ++NW T + + + T+++G++ +V L
Sbjct: 191 NGEKLEG--RNIKVNWVTSNIASKTEQPKRSYDEINNETSSQNCTVYIGNIPKNVESDDL 248
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
++ A Y S++ ++ D KGY F++F ++ NG + + +R
Sbjct: 249 KQLL-AEYGSIEEVRLNKD------KGYAFIKFSKHESATSAILMCNGKIINGSTLR 298
>gi|401625965|gb|EJS43937.1| pab1p [Saccharomyces arboricola H-6]
Length = 577
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 122/251 (48%), Gaps = 27/251 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL+P + E+++ IF G S +V R+ T S GY ++ F H A + +
Sbjct: 39 SLYVGDLEPTVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIDQ 98
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ W+ R++ G IF+ +L D+ + L +TF +V+ +
Sbjct: 99 LNYT--PIKGRLCRIMWSQRDPSLRKKGSG---NIFIKNLHPDIDNKALYDTF-SVFGDI 152
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ- 253
+K+ TD G+SKG+GFV F +E ++ +NG+L + + + + P ++K Q
Sbjct: 153 LSSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQL 211
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAG---- 309
+ KA Y T ++V ++ TD+ + +F Q+G +V +
Sbjct: 212 EETKAHY--------------TNLYVKNINSETTDEKFQEMFAQFGPIVSASLEKDADGK 257
Query: 310 -KRCGFVQFAN 319
K GFV + N
Sbjct: 258 LKGFGFVNYEN 268
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 114/256 (44%), Gaps = 16/256 (6%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L P ++ + F G+ +S K+ ++ S+G+GF+ F
Sbjct: 118 PSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGK-SKGFGFVHFEEE 176
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQ 184
AA+ + NG + E + + + ++ +T ++V ++ ++ TD Q
Sbjct: 177 GAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEKFQ 236
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
E F A + + A + D G+ KG+GFV + + + ++++ +N + + +G A
Sbjct: 237 EMF-AQFGPIVSASLEKD-ADGKLKGFGFVNYENHEDAVKAVEALNESDLNGEKLYVGRA 294
Query: 245 ATKKA---ATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
K +QY+ + QG N +FV LD SV D+ L+ F YG +
Sbjct: 295 QKKNERMHVLKKQYEAYRLEKMAKYQGVN------LFVKNLDDSVDDEKLEEEFAPYGTI 348
Query: 302 VHVKI---PAGKRCGF 314
K+ GK GF
Sbjct: 349 TSAKVMRSENGKSKGF 364
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 90/199 (45%), Gaps = 14/199 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+L++ ++ + +F G VS + ++ +G+GF+ + +H A + ++
Sbjct: 220 NLYVKNINSETTDEKFQEMFAQFGPIVSASLEKDADGKL-KGFGFVNYENHEDAVKAVEA 278
Query: 135 FNGTQMP--------STEQNFRLNWATYGAGERRQDDGPDF---TIFVGDLAADVTDYVL 183
N + + + ++N R++ R + + +FV +L V D L
Sbjct: 279 LNESDLNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKL 338
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+E F A Y ++ AKV+ G+SKG+GFV F E +++TE N + + +P+ +
Sbjct: 339 EEEF-APYGTITSAKVMRSEN-GKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAI 396
Query: 244 AATKKAATGQQYQKATYQN 262
A K Q Q+ +N
Sbjct: 397 AQRKDVRRSQLAQQIQARN 415
>gi|195331490|ref|XP_002032434.1| GM23518 [Drosophila sechellia]
gi|194121377|gb|EDW43420.1| GM23518 [Drosophila sechellia]
Length = 464
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 128/268 (47%), Gaps = 28/268 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++F G S K+IR ++ Y FIE+ ++ AA L
Sbjct: 7 KTLYVGNLDTSVSEDLLIALFSTMGPVKSCKIIREPG---NDPYAFIEYSNYQAASTALT 63
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N E+ ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLF--LEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ ++V D T +SKGY FV F ++E ++ MNG +R +R +T+K +
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTN-WSTRKLPPPR 179
Query: 254 QYQK------------ATYQNTQGSQ--------GENDPNNTTIFVGGLDPSV-TDDILK 292
+ K +GSQ ++ P NTT++ GG P+V +DD++
Sbjct: 180 EASKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMH 239
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQFANR 320
F Q+G + V++ K F++F +
Sbjct: 240 KHFVQFGPIQDVRVFKDKGFSFIKFVTK 267
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P +++GDL P +E + F GE + +++R+ T S+GY F+ F
Sbjct: 84 GNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSF 143
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT 153
V A AE +Q NG + S ++ R NW+T
Sbjct: 144 VKKAEAENAIQAMNGQWIGS--RSIRTNWST 172
>gi|10801574|dbj|BAB16700.1| TIA-1 like protein [Bombyx mori]
Length = 285
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 129/253 (50%), Gaps = 12/253 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L P + E ++ ++FG G+ K+IR ++ Y F+EF H AA L
Sbjct: 8 KTLYVGNLDPSVTEVFLCTLFGXIGDVKGCKIIREPG---NDPYAFLEFTCHTAAATALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N + ++ ++NWAT + + D IFVGDL+ ++ +L+E F A +
Sbjct: 65 AMN--KRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ ++V D T +SKGY FV F +++ ++ MNG +R +R + K A G
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGV 181
Query: 254 Q-----YQKATYQNTQGSQGENDPNNTTIFVGGLDPS-VTDDILKTVFGQYGELVHVKIP 307
++A ++ P NTT++ GG + +T+++++ F Q+G++ +++
Sbjct: 182 NEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVF 241
Query: 308 AGKRCGFVQFANR 320
K F++F +
Sbjct: 242 RDKGYAFIRFTTK 254
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 31/176 (17%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + + F GE + +++R+ QT S+GY F+ F
Sbjct: 85 GNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 144
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATY---------GAGERRQDDGPDF------ 167
V A AE +Q NG + S ++ R NW+T GA ++ P F
Sbjct: 145 VKKADAEAAIQAMNGQWLGS--RSIRTNWSTRKPPAKGVNEGAPSSKRAKQPTFDEVYNQ 202
Query: 168 ------TIFVGDLAAD-VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRF 216
T++ G ++ +T+ ++Q TF + + ++ +V R KGY F+RF
Sbjct: 203 SSPTNTTVYCGGFTSNIITEELMQNTF-SQFGQIQDIRVF------RDKGYAFIRF 251
>gi|195445204|ref|XP_002070221.1| GK11939 [Drosophila willistoni]
gi|194166306|gb|EDW81207.1| GK11939 [Drosophila willistoni]
Length = 469
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 128/271 (47%), Gaps = 33/271 (12%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++FG G S K+IR ++ Y FIE+ ++ AA L
Sbjct: 7 KTLYVGNLDGSVSEDLLIALFGKMGPVKSCKIIREPG---NDPYAFIEYSNYQAATTALT 63
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N E+ ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRVF--LEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG--------PAA 245
+ ++V D T +SKGY FV F ++E ++ MNG +R +R P
Sbjct: 121 ISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 246 TKKAATG---------------QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSV-TDD 289
+ KA + Q+ T++ ++ P NTT++ GG P+V +DD
Sbjct: 181 STKAGGQGGGMGGGGPGNGTGIKSNQRHTFEEV---YNQSSPTNTTVYCGGFPPNVISDD 237
Query: 290 ILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
++ F Q+G + V++ K F++F +
Sbjct: 238 LMHKHFMQFGPIQDVRVFKEKGFAFIKFVTK 268
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P +++GDL P +E + F GE + +++R+ QT S+GY F+ F
Sbjct: 84 GNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSF 143
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT 153
V A AE +Q NG + S ++ R NW+T
Sbjct: 144 VKKAEAENAIQAMNGQWIGS--RSIRTNWST 172
>gi|126273033|ref|XP_001367857.1| PREDICTED: nucleolysin TIAR isoform 1 [Monodelphis domestica]
Length = 388
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 130/261 (49%), Gaps = 20/261 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIR----NKQTNFSEG-----------YG 118
R+L++G+L + E I +F G S K+I +++ N S G Y
Sbjct: 8 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYC 67
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADV 178
F+EF H A L NG ++ E ++NWAT + +++ D F +FVGDL+ ++
Sbjct: 68 FVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEI 124
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T ++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G R
Sbjct: 125 TTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 183
Query: 239 MRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+R A K A + +T Q + ++ P N T++ GG+ +TD +++ F
Sbjct: 184 IRTNWATRKPPAPKSTQENSTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSP 243
Query: 298 YGELVHVKIPAGKRCGFVQFA 318
+G+++ +++ K FV+F+
Sbjct: 244 FGQIMEIRVFPEKGYSFVRFS 264
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 115 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 174
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDG---------------PDFTIFVGDLAADV 178
G + + R NWAT A + Q++ + T++ G +A+ +
Sbjct: 175 GGQWLGGRQ--IRTNWATRKPPAPKSTQENSTKQLRFEDVVNQSSPKNCTVYCGGIASGL 232
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 233 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 278
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 80/181 (44%), Gaps = 39/181 (21%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTD----RTTGRSKG------ 210
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ R S G
Sbjct: 2 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEQPDSRRVNSSVGFSVLQH 60
Query: 211 -----YGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQG 265
Y FV F + + ++ MNG + G++ K + T
Sbjct: 61 TSNDPYCFVEFYEHRDAAAALAAMNG----------------RKILGKEV-KVNWATTPS 103
Query: 266 SQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFAN 319
SQ ++ N+ +FVG L P +T + +K+ F +G++ ++ K GFV F N
Sbjct: 104 SQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYN 163
Query: 320 R 320
+
Sbjct: 164 K 164
>gi|358397912|gb|EHK47280.1| hypothetical protein TRIATDRAFT_165657, partial [Trichoderma
atroviride IMI 206040]
Length = 465
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 126/267 (47%), Gaps = 31/267 (11%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G L + E + IF TG + K+I +K YGF+E+ AA+R +
Sbjct: 76 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAK-GYNYGFVEYDDPGAADRAMA 134
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ +E R+NWA ++D F IFVGDL+ +V D +L + F A + S
Sbjct: 135 TLNGRRVHQSE--IRVNWAYQSNTTTKEDTSNHFHIFVGDLSNEVNDDILHQAFSA-FGS 191
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V A+V+ D TGRS+GYGFV F D + ++++ M+G +R +R A K +
Sbjct: 192 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSMA 251
Query: 254 Q----------------------YQKATYQNTQGSQGENDPN-NTTIFVGGLDPSVTDDI 290
Q + A+Y+ PN TT +VG L P T
Sbjct: 252 QQQAMQAMGMTPTTPFGHHQFPAHGIASYEMILAQT----PNWQTTCYVGNLTPYTTHTD 307
Query: 291 LKTVFGQYGELVHVKIPAGKRCGFVQF 317
+ +F +G +V + A + F++
Sbjct: 308 VVPLFQNFGFVVESRFQADRGFAFIKM 334
>gi|393216132|gb|EJD01623.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 937
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 118/251 (47%), Gaps = 55/251 (21%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTG-EFVSGKV-------IRNKQTNFSEGYGFIEFVSHA 126
+LW GDL+PWM+E Y + G + V+ K+ + +Q N + GY F+ F S
Sbjct: 218 TLWWGDLEPWMDEEYAKQVCDIMGWDQVTVKIPHAPSDSVTGQQPN-NPGYCFLTFPSPQ 276
Query: 127 AAERVLQTFN-----GTQ--MPSTEQNFRLNWATYGAGE--------------------- 158
A VL N GTQ +P++ + F LNWA+ +
Sbjct: 277 HAATVLSQINNASSGGTQAILPNSTKPFALNWASSPSPSPVTQTFPINTTVDRPPSTGTL 336
Query: 159 RRQDDGPDFTIFVGDLAADVTDYVLQETFRAV---------------YSSVKGAKVVTDR 203
Q +++IFVGDLA + ++ L FR + S K AK++ D
Sbjct: 337 NNQGQQKEYSIFVGDLAPETSNSDLVAVFRNPVLGLRNDRAPKFIRPFHSCKSAKIMLDP 396
Query: 204 TTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK---KAATGQQYQKATY 260
TG S+GYGFVRF +E++Q R++ EM+G+ C +RPMRI PA K T Q T
Sbjct: 397 VTGVSRGYGFVRFTEEADQQRALIEMHGLYCLSRPMRISPATAKFKGPGGTDGQTGVTTP 456
Query: 261 QNTQGSQGEND 271
+ G QG N+
Sbjct: 457 ADQAGQQGTNE 467
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 253 QQYQKATYQNTQGSQGE----NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA 308
Q+ +A N G GE DP NTT+FVGGL P +++D L+T F +G++ +VK+PA
Sbjct: 553 QEQARAILGNLIGPNGEQLTSTDPYNTTVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPA 612
Query: 309 GKRCGFVQFANR 320
GK CGFVQF +
Sbjct: 613 GKHCGFVQFVRK 624
>gi|357145576|ref|XP_003573691.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 663
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 125/250 (50%), Gaps = 27/250 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL ++++ + +F G VS +V R+ T S GY ++ F S A A R ++
Sbjct: 43 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARAMEM 102
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ ++ R+ IF+ +L + + L +TF A + ++
Sbjct: 103 LNFT--PVNGKPIRIMYSNRDPSSRKSGAA---NIFIKNLDKSIDNKALFDTFSA-FGTI 156
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV T+ +G SKGYGFV++ + ++ E+NG+L + + + +GP K+
Sbjct: 157 LSCKVATE-ISGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQ------ 209
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG---ELVHVKIPAGK- 310
+N GS P ++V L S T+D LK +FG++G ++ V+ GK
Sbjct: 210 ----ERENVFGS-----PKFNNVYVKNLSESTTEDNLKEMFGKFGPITSVIVVRADDGKS 260
Query: 311 RC-GFVQFAN 319
RC GFV F N
Sbjct: 261 RCFGFVNFEN 270
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 122/266 (45%), Gaps = 29/266 (10%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P + G +++I +L ++ + F G +S KV + + S+GYGF+++
Sbjct: 122 PSSRKSGAANIFIKNLDKSIDNKALFDTFSAFGTILSCKVA-TEISGESKGYGFVQYEQD 180
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD--DGPDFT-IFVGDLAADVTDYV 182
+A+ + NG + + ++ + + R++ P F ++V +L+ T+
Sbjct: 181 ESAQNAINELNGMLL----NDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDN 236
Query: 183 LQETFRAV--YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L+E F +SV +V G+S+ +GFV F + + R++ ++NG + +
Sbjct: 237 LKEMFGKFGPITSV----IVVRADDGKSRCFGFVNFENPDDAARAVEDLNGKKLDDKELY 292
Query: 241 IGPAATKKAATGQ---QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDD-ILKTVFG 296
+G A K Q +++K+ + +QG T +++ LD SV DD LK +F
Sbjct: 293 VGRAQKKSEREMQLKEKFEKSNKETADKNQG------TNLYLKNLDGSVDDDEKLKELFA 346
Query: 297 QYGELVHVKIP-----AGKRCGFVQF 317
++G + K+ K GFV F
Sbjct: 347 EFGTITSCKVMRDSNGVNKGSGFVAF 372
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 15/186 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L E + +FG G S V+R S +GF+ F + A R ++
Sbjct: 222 NVYVKNLSESTTEDNLKEMFGKFGPITSVIVVRADDGK-SRCFGFVNFENPDDAARAVED 280
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTD-YV 182
NG ++ +E+ +L + + D +++ +L V D
Sbjct: 281 LNGKKLDDKELYVGRAQKKSEREMQLKEKFEKSNKETADKNQGTNLYLKNLDGSVDDDEK 340
Query: 183 LQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
L+E F A + ++ KV+ D + G +KG GFV F + R++ MNG + ++P+ +
Sbjct: 341 LKELF-AEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDASRALVAMNGKMVGSKPLYVA 398
Query: 243 PAATKK 248
A K+
Sbjct: 399 LAQRKE 404
>gi|7446337|pir||T15542 hypothetical protein C18A3.5 - Caenorhabditis elegans
Length = 448
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 134/291 (46%), Gaps = 47/291 (16%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVI----------------------- 106
SD R+L++G+L + E +IA++F G KVI
Sbjct: 42 SDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDVSFSLWNKTNLYRKLLLARGI 101
Query: 107 --------------RNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWA 152
+ +T ++ Y F+EF H A + LQT N + E ++NWA
Sbjct: 102 GVPGYKCTRRQPIHTDTETGSNDPYAFVEFSDHGQASQALQTMNKRLLLDRE--MKVNWA 159
Query: 153 TY-GAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGY 211
G + + D F +FVGDL+++V + L+E F+ + V AKV+ D T +SKGY
Sbjct: 160 VEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQP-FGDVSDAKVIRDTNTTKSKGY 218
Query: 212 GFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEND 271
GFV + E R++ +MNG R +R A K G Q + + Y + N
Sbjct: 219 GFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKP---GDQEKPSHYNEKSYDEIYNQ 275
Query: 272 P--NNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
+NT+++VG + S+T+D ++ F +G + V+I + FV+F N+
Sbjct: 276 TSGDNTSVYVGNI-ASLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNK 325
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 79/170 (46%), Gaps = 25/170 (14%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL ++ + F G+ KVIR+ T S+GYGF+ + AER ++
Sbjct: 177 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 236
Query: 136 NGTQMPSTEQNFRLNWATYGAGER---------------RQDDGPDFTIFVGDLAADVTD 180
NG + + R NWAT G++ Q G + +++VG++A+ D
Sbjct: 237 NGQWLG--RRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTED 294
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMN 230
+ Q A + + ++ + +GY FV+F ++ +++ +MN
Sbjct: 295 EIRQGF--ASFGRITEVRIF------KMQGYAFVKFDNKDAAAKAIVQMN 336
>gi|167391953|ref|XP_001739964.1| nucleolysin TIAR [Entamoeba dispar SAW760]
gi|165896141|gb|EDR23641.1| nucleolysin TIAR, putative [Entamoeba dispar SAW760]
Length = 306
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 137/280 (48%), Gaps = 19/280 (6%)
Query: 42 PPPVGWTPQPVPP---PSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTG 98
PP V Q PP P++ T+P P + +S+ + + ++E + IF G
Sbjct: 12 PPRVPQLYQQRPPQQNPTETTEP----PIPINANSKSVHVSGIHESVDEILLGRIFSIVG 67
Query: 99 EFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGE 158
VS K++R+K + GYGF+EFV A +G + E ++NW+ Y A
Sbjct: 68 HVVSCKIMRDKSGTHA-GYGFVEFVDSTTARFAKDNMDGRVVYGRE--LKVNWS-YTA-- 121
Query: 159 RRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGD 218
+Q++ + IFVG L +V D +L +TF+ + V A+V+ TG+SKGYGFV F
Sbjct: 122 -QQENQGSYKIFVGGLQPEVNDDLLYKTFQK-FGRVTDARVLKFTQTGKSKGYGFVTFIR 179
Query: 219 ESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIF 278
+ + +M MNG R +++ + A+ +Q K +Y E N T++
Sbjct: 180 KEDAETAMQMMNGEKLEGRNIKVNWVTSNIASKTEQ-PKRSYDEI---NNETSIQNCTVY 235
Query: 279 VGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFA 318
+G + +V D LK + +YG + V++ K F++F+
Sbjct: 236 IGNIPKNVESDDLKQLLAEYGSIEEVRLNKDKGYAFIKFS 275
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 21/181 (11%)
Query: 72 GIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
G +++G LQP + + + F G +V++ QT S+GYGF+ F+ AE
Sbjct: 127 GSYKIFVGGLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETA 186
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDF------------TIFVGDLAADVT 179
+Q NG ++ +N ++NW T + + + T+++G++ +V
Sbjct: 187 MQMMNGEKLEG--RNIKVNWVTSNIASKTEQPKRSYDEINNETSIQNCTVYIGNIPKNVE 244
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
L++ A Y S++ ++ D KGY F++F ++ NG + + +
Sbjct: 245 SDDLKQLL-AEYGSIEEVRLNKD------KGYAFIKFSKHESATSAILMCNGKIINGSTL 297
Query: 240 R 240
R
Sbjct: 298 R 298
>gi|302696241|ref|XP_003037799.1| hypothetical protein SCHCODRAFT_83732 [Schizophyllum commune H4-8]
gi|300111496|gb|EFJ02897.1| hypothetical protein SCHCODRAFT_83732 [Schizophyllum commune H4-8]
Length = 759
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 111/226 (49%), Gaps = 46/226 (20%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTG-EFVSGKV-------IRNKQTNFSEGY 117
P++++ +W GDL+PWM+E Y + G + V+ KV +Q N + GY
Sbjct: 160 PNSAASKSTLIW-GDLEPWMDEEYAKQVCNLMGWDPVNIKVPHPQPDPATGQQAN-NPGY 217
Query: 118 GFIEFVSHAAAERVLQTFNG------TQMPSTEQNFRLNWAT--------------YGAG 157
F+ F + A A VL N MP++ + F +NWA AG
Sbjct: 218 CFLTFPTPAHAASVLAQVNNNGTGGPVTMPNSSKAFVMNWAAGMPATSPVGNSFSAVNAG 277
Query: 158 ERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV---------------YSSVKGAKVVTD 202
+ Q +++IFVGDLA + ++ L FR + S K AK++ D
Sbjct: 278 VQNQYPK-EYSIFVGDLAPETSNSDLVAVFRNPVLGLRNDREPKFIRPFLSCKSAKIMLD 336
Query: 203 RTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
TG S+GYGFVRF DE++Q R++ EM+G+ C +RPMRI PA K
Sbjct: 337 PVTGVSRGYGFVRFTDEADQQRALIEMHGLYCLSRPMRISPATAKN 382
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 4/68 (5%)
Query: 257 KATYQNTQGSQGE----NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+A N G GE DP NTT+FVGGL P +++D L+T F +G++ +VK+P GK C
Sbjct: 524 RAILGNLIGPNGEQLTSTDPYNTTVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPVGKHC 583
Query: 313 GFVQFANR 320
GFVQF +
Sbjct: 584 GFVQFVRK 591
>gi|224073594|ref|XP_002304117.1| predicted protein [Populus trichocarpa]
gi|222841549|gb|EEE79096.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/320 (31%), Positives = 155/320 (48%), Gaps = 35/320 (10%)
Query: 16 YQQQHQQWMAYQQQSQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRS 75
Q+ Q Q QQ Q Q+ P + PQ P PS P G P RS
Sbjct: 3 QQRLKQ---QQQALMQQALLQQQSIYHPGLLAPPQIEPIPSGNLPP-GFDPST----CRS 54
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++G++ + E + +F TG K+IR ++++ YGFI + AA + +
Sbjct: 55 VYVGNIHTQVTEPLLQEVFASTGPVEGCKLIRKEKSS----YGFIHYFDRRAAALAILSL 110
Query: 136 NGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVK 195
NG + Q ++NWA Y +G+R G F IFVGDL+ +VTD L F +VY S
Sbjct: 111 NGRHL--FGQPIKVNWA-YASGQREDTSG-HFNIFVGDLSPEVTDATLYACF-SVYPSCS 165
Query: 196 GAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQY 255
A+V+ D+ TGRS+G+GFV F ++ + ++ ++ G +R +R A+K A + +
Sbjct: 166 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN-WASKGAGSNEDK 224
Query: 256 Q----KATYQNTQGSQG-----------ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGE 300
Q K+ + T G+ EN+P TT++VG L P VT +L F G
Sbjct: 225 QSSDSKSVVELTIGTSEDGMEAPNNEAPENNPQYTTVYVGNLSPEVTQPVLHRHFHVLGA 284
Query: 301 LV--HVKIPAGKRCGFVQFA 318
V V++ K GFV+F+
Sbjct: 285 GVIEEVRVQRDKGFGFVRFS 304
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 39/197 (19%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
+ G ++++GDL P + ++ + + F +V+ +++T S G+GF+ F + A+
Sbjct: 134 TSGHFNIFVGDLSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ 193
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYGAG--ERRQ-------------------------- 161
+ G + S + R NWA+ GAG E +Q
Sbjct: 194 SAINDLTGKWLGSRQ--IRCNWASKGAGSNEDKQSSDSKSVVELTIGTSEDGMEAPNNEA 251
Query: 162 -DDGPDFT-IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDE 219
++ P +T ++VG+L+ +VT VL F V GA V+ + R KG+GFVRF
Sbjct: 252 PENNPQYTTVYVGNLSPEVTQPVLHRHFH-----VLGAGVIEEVRVQRDKGFGFVRFSTH 306
Query: 220 SEQLRS--MTEMNGVLC 234
+E + M +LC
Sbjct: 307 AEAAVAIQMGNAQSLLC 323
>gi|195573327|ref|XP_002104645.1| GD18328 [Drosophila simulans]
gi|194200572|gb|EDX14148.1| GD18328 [Drosophila simulans]
Length = 824
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 125/248 (50%), Gaps = 10/248 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++F G S K+IR ++ Y FIE+ ++ AA L
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPG---NDPYAFIEYSNYQAASTALT 63
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N E+ ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLF--LEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ ++V D T +SKGY FV F ++E ++ MNG +R +R +T+K +
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTN-WSTRKLPPPR 179
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSV-TDDILKTVFGQYGELVHVKIPAGKRC 312
+ K +Q + P NTT++ GG P+V +DD++ F Q+G + V++ K
Sbjct: 180 EPSKXXXXXEVYNQ--SSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGF 237
Query: 313 GFVQFANR 320
F++F +
Sbjct: 238 SFIKFVTK 245
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 69/167 (41%), Gaps = 21/167 (12%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P +++GDL P +E + F GE + +++R+ T S+GY F+ F
Sbjct: 84 GNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSF 143
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR-------------QDDGPDFTI 169
V A AE +Q NG + S ++ R NW+T R Q + T+
Sbjct: 144 VKKAEAENAIQAMNGQWIGS--RSIRTNWSTRKLPPPREPSKXXXXXEVYNQSSPTNTTV 201
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRF 216
+ G +V L + ++ +V D KG+ F++F
Sbjct: 202 YCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKD------KGFSFIKF 242
>gi|407038416|gb|EKE39116.1| RNA-binding protein TIA-1, putative [Entamoeba nuttalli P19]
Length = 306
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 143/289 (49%), Gaps = 15/289 (5%)
Query: 30 SQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESY 89
++Q ++Q P P + +P S +T + +A+S +S+ + + ++E
Sbjct: 2 TRQYDSRYQYPPRTPQLYQQRPPQQNSTETTDSSLPINANS---KSVHVSGIHESVDEIL 58
Query: 90 IASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRL 149
+ IF G VS K++R+K + GYGF+EFV A +G + E ++
Sbjct: 59 LGRIFSIVGHVVSCKIMRDK-SGVHAGYGFVEFVDSTTARFAKDNMDGRVVYGRE--LKV 115
Query: 150 NWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSK 209
NW+ Y A +Q++ ++ IFVG L +V D +L +TF+ + V A+V+ TG+SK
Sbjct: 116 NWS-YTA---QQENQGNYKIFVGGLQPEVNDDLLYKTFQK-FGRVTDARVLKFTQTGKSK 170
Query: 210 GYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGE 269
GYGFV F + + +M MNG R +++ + A+ +Q K +Y E
Sbjct: 171 GYGFVTFIRKEDAETAMQMMNGEKLEGRNIKVNWVTSNIASKTEQ-PKRSYDEI---NNE 226
Query: 270 NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFA 318
N T+++G + +V D LK + +YG + V++ K F++F+
Sbjct: 227 TSSQNCTVYIGNIPKNVESDDLKQLLAEYGSIEEVRLNKDKGYAFIKFS 275
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 80/177 (45%), Gaps = 21/177 (11%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++G LQP + + + F G +V++ QT S+GYGF+ F+ AE +Q
Sbjct: 131 IFVGGLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAMQMM 190
Query: 136 NGTQMPSTEQNFRLNWATYGAGER------------RQDDGPDFTIFVGDLAADVTDYVL 183
NG ++ +N ++NW T + + + T+++G++ +V L
Sbjct: 191 NGEKLEG--RNIKVNWVTSNIASKTEQPKRSYDEINNETSSQNCTVYIGNIPKNVESDDL 248
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
++ A Y S++ ++ D KGY F++F ++ NG + + +R
Sbjct: 249 KQLL-AEYGSIEEVRLNKD------KGYAFIKFSKHESATSAILMCNGKIINGSTLR 298
>gi|41055734|ref|NP_956476.1| TIA1 cytotoxic granule-associated RNA binding protein 1 [Danio
rerio]
gi|28277744|gb|AAH45485.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
gi|44890544|gb|AAH66734.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 132/249 (53%), Gaps = 14/249 (5%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E+ I +F G S K+I + N + Y F+EF + A L
Sbjct: 9 RTLYVGNLSRDVTEALILQVFSQIGPCKSCKMILDTTGN--DPYCFVEFYENRHAAAALA 66
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ ++ ++NWA+ + +++ D F +FVGDL+ +++ ++ F A +
Sbjct: 67 AMNGRKI--LGKDMKVNWASTPSSQKK-DTSNHFHVFVGDLSPEISTDDVRAAF-APFGK 122
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG-----PAATKK 248
+ A+VV D TG+SKGYGF+ F ++ + ++ +MNG R +R P+A K
Sbjct: 123 ISDARVVKDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWATRKPSAPKS 182
Query: 249 AATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA 308
G + +Y+ ++ P+N T++ GG+ ++D +++ F +G+++ +++
Sbjct: 183 NNEGASSKHLSYEEV---LNQSSPSNCTVYCGGIASGLSDQLMRQTFSPFGQIMEIRVFP 239
Query: 309 GKRCGFVQF 317
K FV+F
Sbjct: 240 EKGYSFVRF 248
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 81/176 (46%), Gaps = 27/176 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + + + F G+ +V+++ T S+GYGFI F++ AE +Q
Sbjct: 99 VFVGDLSPEISTDDVRAAFAPFGKISDARVVKDLATGKSKGYGFISFINKWDAESAIQQM 158
Query: 136 NGTQMPSTEQNFRLNWATY----------GAGERR--------QDDGPDFTIFVGDLAAD 177
NG + + R NWAT GA + Q + T++ G +A+
Sbjct: 159 NGQWLGGRQ--IRTNWATRKPSAPKSNNEGASSKHLSYEEVLNQSSPSNCTVYCGGIASG 216
Query: 178 VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
++D ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 217 LSDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFDSHEGAAHAIVSVNGTC 265
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 26/159 (16%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T++VG+L+ DVT+ ++ + F + K K++ D TTG Y FV F + ++
Sbjct: 10 TLYVGNLSRDVTEALILQVFSQI-GPCKSCKMILD-TTGNDP-YCFVEFYENRHAAAALA 66
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
MNG + M++ A+T SQ ++ N+ +FVG L P ++
Sbjct: 67 AMNGRKILGKDMKVNWASTPS-----------------SQKKDTSNHFHVFVGDLSPEIS 109
Query: 288 DDILKTVFGQYGELVHVKIP------AGKRCGFVQFANR 320
D ++ F +G++ ++ K GF+ F N+
Sbjct: 110 TDDVRAAFAPFGKISDARVVKDLATGKSKGYGFISFINK 148
>gi|393248198|gb|EJD55705.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 426
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 103/175 (58%), Gaps = 9/175 (5%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERVL 132
L++G+L P + E + IF G K+I ++ N+ G YGF+E++ AAE L
Sbjct: 8 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYMDMRAAETAL 65
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT NG ++ TE R+NWA Y + ++D F +FVGDL+ +V+D VL + F A +
Sbjct: 66 QTLNGRKIFDTE--IRVNWA-YQGSQNKEDTSNHFHVFVGDLSPEVSDEVLGKAFSA-FG 121
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
++ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +R +R+ A K
Sbjct: 122 TLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQK 176
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 25/158 (15%)
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSK-GYGFVRFGDESEQLRSMT 227
++VG+L+ VT+Y+L E F AV V+ K++ DR YGFV + D ++
Sbjct: 8 LYVGNLSPRVTEYMLTEIF-AVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQ 66
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEND-PNNTTIFVGGLDPSV 286
+NG +R+ A QGSQ + D N+ +FVG L P V
Sbjct: 67 TLNGRKIFDTEIRVNWA------------------YQGSQNKEDTSNHFHVFVGDLSPEV 108
Query: 287 TDDILKTVFGQYGELVHVKI----PAGKRCGFVQFANR 320
+D++L F +G L ++ +GK G+ A R
Sbjct: 109 SDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFR 146
>gi|449506038|ref|XP_002188262.2| PREDICTED: nucleolysin TIAR [Taeniopygia guttata]
Length = 453
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 123/244 (50%), Gaps = 7/244 (2%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
++G+L + E I +F G S K+I +N + Y F+EF H A L
Sbjct: 92 CYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALAAM 149
Query: 136 NGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVK 195
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A + +
Sbjct: 150 NGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAF-APFGKIS 205
Query: 196 GAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQY 255
A+VV D TG+SKGYGFV F ++ + ++ M G R +R A K A
Sbjct: 206 DARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQ 265
Query: 256 QKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGF 314
+ T Q + ++ P N T++ GG+ +TD +++ F +G+++ +++ K F
Sbjct: 266 ENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSF 325
Query: 315 VQFA 318
V+F+
Sbjct: 326 VRFS 329
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 180 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 239
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDG---------------PDFTIFVGDLAADV 178
G + + R NWAT A + Q++ + T++ G +A+ +
Sbjct: 240 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 297
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 298 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 343
>gi|126273037|ref|XP_001367935.1| PREDICTED: nucleolysin TIAR isoform 3 [Monodelphis domestica]
Length = 385
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 127/259 (49%), Gaps = 19/259 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I +N + Y F+EF H A L
Sbjct: 8 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALA 65
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQD-------------DGPDFTIFVGDLAADVTD 180
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T
Sbjct: 66 AMNGRKILGKE--VKVNWATTPSSQKKDTSSKYIVAITVHLRDQDHFHVFVGDLSPEITT 123
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G R +R
Sbjct: 124 EDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR 182
Query: 241 IGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
A K A + +T Q + ++ P N T++ GG+ +TD +++ F +G
Sbjct: 183 TNWATRKPPAPKSTQENSTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFG 242
Query: 300 ELVHVKIPAGKRCGFVQFA 318
+++ +++ K FV+F+
Sbjct: 243 QIMEIRVFPEKGYSFVRFS 261
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 84/169 (49%), Gaps = 18/169 (10%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ T+ + Y FV F +
Sbjct: 2 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEHTS--NDPYCFVEFYEHR 58
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAAT---KKAATGQQYQKATYQNTQGSQGENDPNNTTI 277
+ ++ MNG + +++ A T +K T +Y A + + D ++ +
Sbjct: 59 DAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSSKYIVAITVHLR------DQDHFHV 112
Query: 278 FVGGLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANR 320
FVG L P +T + +K+ F +G++ ++ K GFV F N+
Sbjct: 113 FVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNK 161
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 112 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 171
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDG---------------PDFTIFVGDLAADV 178
G + + R NWAT A + Q++ + T++ G +A+ +
Sbjct: 172 GGQWLGGRQ--IRTNWATRKPPAPKSTQENSTKQLRFEDVVNQSSPKNCTVYCGGIASGL 229
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 230 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 275
>gi|26390405|dbj|BAC25892.1| unnamed protein product [Mus musculus]
Length = 358
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 123/237 (51%), Gaps = 7/237 (2%)
Query: 85 MEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTE 144
+ E+ I +F G + K+I + N + Y F+EF H A L NG ++ E
Sbjct: 1 VTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALAAMNGRKIMGKE 58
Query: 145 QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRT 204
++NWAT + +++ D F +FVGDL+ ++T ++ F A + + A+VV D
Sbjct: 59 --VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAF-APFGRISDARVVKDMA 114
Query: 205 TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQ 264
TG+SKGYGFV F ++ + ++ +M G R +R A K A Y+ T Q +
Sbjct: 115 TGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSY 174
Query: 265 GS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
++ PNN T++ GG+ +T+ +++ F +G+++ +++ K FV+F++
Sbjct: 175 DEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSH 231
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 80 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 139
Query: 136 NGTQMPSTEQNFRLNWA---------TYGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWA TY + ++ Q + T++ G + + +
Sbjct: 140 GGQWLGGRQ--IRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGL 197
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 198 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSVNG 243
>gi|304798|gb|AAA28828.1| polyadenylate-binding protein [Drosophila melanogaster]
gi|304800|gb|AAA02941.1| polyadenylate-binding protein [Drosophila melanogaster]
Length = 465
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 124/267 (46%), Gaps = 26/267 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++F G S K+IR ++ Y FIE+ ++ AA L
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPG---NDPYAFIEYSNYQAATTALT 63
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N E+ ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLF--LEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG----------- 242
+ ++V D T +SKGY FV F ++E ++ MN ++R +R
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNRQWIASRSIRTNWSTRKLPPPRE 180
Query: 243 PAATKKAATGQQYQKATYQNTQGSQ--------GENDPNNTTIFVGGLDPSV-TDDILKT 293
P+ G +GSQ ++ P NTT++ GG P+V +DD++
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHK 240
Query: 294 VFGQYGELVHVKIPAGKRCGFVQFANR 320
F Q+G + V++ K F++F +
Sbjct: 241 HFVQFGPIQDVRVFKDKGFSFIKFVTK 267
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P +++GDL P +E + F GE + +++R+ T S+GY F+ F
Sbjct: 84 GNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSF 143
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT 153
V A AE +Q N + S ++ R NW+T
Sbjct: 144 VKKAEAENAIQAMNRQWIAS--RSIRTNWST 172
>gi|37681959|gb|AAQ97857.1| TIA1 cytotoxic granule-associated RNA binding protein [Danio rerio]
gi|160773363|gb|AAI55270.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 132/249 (53%), Gaps = 14/249 (5%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E+ I +F G S K+I + N + Y F+EF + A L
Sbjct: 9 RTLYVGNLSRDVTEALILQVFSQIGPCKSCKMILDTTGN--DPYCFVEFYENRHAAAALA 66
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ ++ ++NWA+ + +++ D F +FVGDL+ +++ ++ F A +
Sbjct: 67 AMNGRKI--LGKDMKVNWASTPSSQKK-DTSNHFHVFVGDLSPEISTDDVRAAF-APFGK 122
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG-----PAATKK 248
+ A+VV D TG+SKGYGF+ F ++ + ++ +MNG R +R P+A K
Sbjct: 123 ISDARVVRDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWATRKPSAPKS 182
Query: 249 AATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA 308
G + +Y+ ++ P+N T++ GG+ ++D +++ F +G+++ +++
Sbjct: 183 NNEGASSKHLSYEEV---LNQSSPSNCTVYCGGIASGLSDQLMRQTFSPFGQIMEIRVFP 239
Query: 309 GKRCGFVQF 317
K FV+F
Sbjct: 240 EKGYSFVRF 248
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 27/176 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + + + F G+ +V+R+ T S+GYGFI F++ AE +Q
Sbjct: 99 VFVGDLSPEISTDDVRAAFAPFGKISDARVVRDLATGKSKGYGFISFINKWDAESAIQQM 158
Query: 136 NGTQMPSTEQNFRLNWATY----------GAGERR--------QDDGPDFTIFVGDLAAD 177
NG + + R NWAT GA + Q + T++ G +A+
Sbjct: 159 NGQWLGGRQ--IRTNWATRKPSAPKSNNEGASSKHLSYEEVLNQSSPSNCTVYCGGIASG 216
Query: 178 VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
++D ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 217 LSDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFDSHEGAAHAIVSVNGTC 265
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 26/159 (16%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T++VG+L+ DVT+ ++ + F + K K++ D TTG Y FV F + ++
Sbjct: 10 TLYVGNLSRDVTEALILQVFSQI-GPCKSCKMILD-TTGNDP-YCFVEFYENRHAAAALA 66
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
MNG + M++ A+T SQ ++ N+ +FVG L P ++
Sbjct: 67 AMNGRKILGKDMKVNWASTPS-----------------SQKKDTSNHFHVFVGDLSPEIS 109
Query: 288 DDILKTVFGQYGELVHVKIP------AGKRCGFVQFANR 320
D ++ F +G++ ++ K GF+ F N+
Sbjct: 110 TDDVRAAFAPFGKISDARVVRDLATGKSKGYGFISFINK 148
>gi|354545611|emb|CCE42339.1| hypothetical protein CPAR2_808880 [Candida parapsilosis]
Length = 739
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 115/224 (51%), Gaps = 30/224 (13%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSG---------KVIRNKQTNFSEGYGFIEFVS 124
R+LW+GDL W++E I ++ + + G K+ Q + GY F+EF S
Sbjct: 123 RTLWMGDLDSWLDEQQITDLWWNLLKKKVGVKIIKPKALKLDPQLQGLTNSGYCFVEFES 182
Query: 125 HAAAERVLQTFNGTQMPST---------------EQNFRLNWATYGAGERRQDDGPDFTI 169
A++ L + NG +P ++ FRLNWA+ P++++
Sbjct: 183 FEDAQQAL-SLNGQLLPDIAMPSQQLYPNNPDNQKKYFRLNWASGATLSAPIVQMPEYSL 241
Query: 170 FVGDLAADVTDYVLQETFRAVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE 228
FVGDL+A T+ L F+ + +S+K +V+TD +G+S+ +GFVRF +ESE+ R++TE
Sbjct: 242 FVGDLSASTTEAHLLAFFQKRFPNSIKTVRVMTDPISGKSRCFGFVRFTEESERQRALTE 301
Query: 229 MNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDP 272
MNGV + RP+R+ A + Y+K + N + N P
Sbjct: 302 MNGVWFAGRPLRVALATPRST----NYRKFSKPNNSHNNSTNIP 341
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 270 NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
+DPNNTT+FVGGL VT+ L T+F +G + +KIP GK CGFV+++ R
Sbjct: 471 SDPNNTTVFVGGLSSEVTEATLFTLFKPFGVIQQIKIPPGKNCGFVKYSTR 521
>gi|354491765|ref|XP_003508025.1| PREDICTED: nucleolysin TIAR-like [Cricetulus griseus]
Length = 285
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 128/244 (52%), Gaps = 7/244 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAF-APFGR 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS 180
Query: 254 QYQKATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++ +++ K
Sbjct: 181 TYELNTKQLSYDEVVSQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQILEIRVFPDKGY 240
Query: 313 GFVQ 316
F++
Sbjct: 241 SFIR 244
>gi|417410125|gb|JAA51540.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily, partial [Desmodus rotundus]
Length = 367
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 123/243 (50%), Gaps = 7/243 (2%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFN 136
++G+L + E I +F G S K+I +N + Y F+EF H A L N
Sbjct: 3 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALAAMN 60
Query: 137 GTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKG 196
G ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A + +
Sbjct: 61 GRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAF-APFGKISD 116
Query: 197 AKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ 256
A+VV D TG+SKGYGFV F ++ + ++ M G R +R A K A +
Sbjct: 117 ARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQE 176
Query: 257 KATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFV 315
T Q + ++ P N T++ GG+ +TD +++ F +G+++ +++ K FV
Sbjct: 177 NNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFV 236
Query: 316 QFA 318
+F+
Sbjct: 237 RFS 239
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 90 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 149
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDG---------------PDFTIFVGDLAADV 178
G + + R NWAT A + Q++ + T++ G +A+ +
Sbjct: 150 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 207
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 208 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 253
>gi|390601667|gb|EIN11061.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 877
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 107/212 (50%), Gaps = 40/212 (18%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTG-EFVSGKVI------RNKQTNFSEGYGFIEFVSHAA 127
+LW G+L+PWM+E Y + G G V KV ++ Q N + GY F+ F + A
Sbjct: 134 TLWWGNLEPWMDEEYAKQVCGLMGWNPVDIKVPSPAEAGQSAQAN-NPGYCFLSFSNPAQ 192
Query: 128 AERVLQTFNGTQ-----MPSTEQNFRLNWAT------YGAGERRQDDGP------DFTIF 170
A VL NG MP++ + F LNWA+ + P +++IF
Sbjct: 193 AAAVLAQVNGNGGNAAIMPNSTRPFTLNWASSIPQSALNTSMHPPNSVPGQPFQKEYSIF 252
Query: 171 VGDLAADVTDYVLQETFRAV---------------YSSVKGAKVVTDRTTGRSKGYGFVR 215
VGDLA + ++ L FR + S K AK++ D TG SKGYGFVR
Sbjct: 253 VGDLAPEASNSDLVAVFRNPVLGLRNDREPKFIRPFLSCKSAKIMLDPATGVSKGYGFVR 312
Query: 216 FGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
F DE++Q R++ EM+G+ C +RPMRI PA K
Sbjct: 313 FTDEADQQRALVEMHGLYCLSRPMRISPATAK 344
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 4/68 (5%)
Query: 257 KATYQNTQGSQGEN----DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+A N G GE DP NTT+FVGGL P +++D L+T F +G++ +VK+P GK C
Sbjct: 515 RAILSNLIGPNGEQLTSMDPYNTTVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPVGKHC 574
Query: 313 GFVQFANR 320
GFVQF +
Sbjct: 575 GFVQFVRK 582
>gi|291386623|ref|XP_002709696.1| PREDICTED: TIA1 cytotoxic granule-associated RNA binding
protein-like [Oryctolagus cuniculus]
Length = 386
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 126/242 (52%), Gaps = 7/242 (2%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFN 136
++G+L + E+ I +F G + K+I + N + Y F+EF H A L N
Sbjct: 21 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALAAMN 78
Query: 137 GTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKG 196
G ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A + +
Sbjct: 79 GRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAF-APFGRISD 134
Query: 197 AKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ 256
A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A Y+
Sbjct: 135 ARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYE 194
Query: 257 KATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFV 315
T Q + ++ P+N T++ GG+ +T+ +++ F +G+++ +++ K FV
Sbjct: 195 SNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFV 254
Query: 316 QF 317
+F
Sbjct: 255 RF 256
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 136 NGTQMPSTEQNFRLNWA---------TYGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWA TY + ++ Q + T++ G + + +
Sbjct: 168 GGQWLGGRQ--IRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGL 225
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 226 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNG 271
>gi|384491350|gb|EIE82546.1| hypothetical protein RO3G_07251 [Rhizopus delemar RA 99-880]
Length = 348
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 133/259 (51%), Gaps = 27/259 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIR-NKQTNF-SEGYGFIEFVSHAAAERVL 132
++++G+L + ++ + IF G+ VS K+I K NF + YGF+EF AE+ +
Sbjct: 19 TIYVGNLDQRVTDTMLNEIFTTVGQVVSVKIISVRKHNNFGAVNYGFVEFADPRVAEQAI 78
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGER------RQDDGPDFTIFVGDLAADVTDYVLQET 186
Q NG ++ + E R NWA A ++D F +FVGDLAA++ D L +
Sbjct: 79 QDMNGRKIFNYE--IRANWAQPSANINPPLQMTKEDTTNHFHVFVGDLAAEINDEKLAQA 136
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
F + + ++ A V+ D +G+S+G+GFV F D+++ R++ MNG TRP+R AT
Sbjct: 137 F-SEFGTMSEAHVMWDPLSGKSRGFGFVAFRDKTDAERAIATMNGEWLGTRPIRCN-WAT 194
Query: 247 KKAAT-------GQQY-QKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQY 298
+K T GQQ + Q T T+I+VG + +V+ + L F ++
Sbjct: 195 QKGQTAMPAPQPGQQLPYEVVVQQTPAYV-------TSIYVGNIPLNVSQNDLVQPFQRF 247
Query: 299 GELVHVKIPAGKRCGFVQF 317
G + VK A + FV+
Sbjct: 248 GYVQEVKFQADRGFAFVKM 266
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 17/156 (10%)
Query: 165 PDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGR--SKGYGFVRFGDESEQ 222
P TI+VG+L VTD +L E F V V K+++ R + YGFV F D
Sbjct: 16 PATTIYVGNLDQRVTDTMLNEIFTTV-GQVVSVKIISVRKHNNFGAVNYGFVEFADPRVA 74
Query: 223 LRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGL 282
+++ +MNG +R A + +A + T ++T N+ +FVG L
Sbjct: 75 EQAIQDMNGRKIFNYEIRANWA--QPSANINPPLQMTKEDT--------TNHFHVFVGDL 124
Query: 283 DPSVTDDILKTVFGQYGELVHVKI----PAGKRCGF 314
+ D+ L F ++G + + +GK GF
Sbjct: 125 AAEINDEKLAQAFSEFGTMSEAHVMWDPLSGKSRGF 160
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 8/53 (15%)
Query: 275 TTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKR--------CGFVQFAN 319
TTI+VG LD VTD +L +F G++V VKI + ++ GFV+FA+
Sbjct: 18 TTIYVGNLDQRVTDTMLNEIFTTVGQVVSVKIISVRKHNNFGAVNYGFVEFAD 70
>gi|351710501|gb|EHB13420.1| Nucleolysin TIAR [Heterocephalus glaber]
Length = 392
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 129/261 (49%), Gaps = 20/261 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIR----NKQTNFSEG-----------YG 118
R+L++G+L + E I +F G S K+I +++ N S G Y
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYC 68
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADV 178
F+EF H A L NG ++ E ++NWAT + +++ D F +FVGDL+ ++
Sbjct: 69 FVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEI 125
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T ++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G R
Sbjct: 126 TTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 184
Query: 239 MRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+R A K A + T Q + ++ P N T++ GG+ +TD +++ F
Sbjct: 185 IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSP 244
Query: 298 YGELVHVKIPAGKRCGFVQFA 318
+G+++ +++ K FV+F+
Sbjct: 245 FGQIMEIRVFPEKGYSFVRFS 265
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 175
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDG---------------PDFTIFVGDLAADV 178
G + + R NWAT A + Q++ + T++ G +A+ +
Sbjct: 176 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 233
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 234 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 279
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 80/181 (44%), Gaps = 39/181 (21%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTD----RTTGRSKG------ 210
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ R S G
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEQPDSRRVNSSVGFSVLQH 61
Query: 211 -----YGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQG 265
Y FV F + + ++ MNG + G++ K + T
Sbjct: 62 TSNDPYCFVEFYEHRDAAAALAAMNG----------------RKILGKEV-KVNWATTPS 104
Query: 266 SQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFAN 319
SQ ++ N+ +FVG L P +T + +K+ F +G++ ++ K GFV F N
Sbjct: 105 SQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYN 164
Query: 320 R 320
+
Sbjct: 165 K 165
>gi|297802580|ref|XP_002869174.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315010|gb|EFH45433.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 625
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 138/293 (47%), Gaps = 36/293 (12%)
Query: 32 QQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIA 91
Q Q Q QTP V T PV +G SL++GDL + +S +
Sbjct: 3 QVQLQGQTPNGSTVAVTSAPVTSGGATAAGFGTT---------SLYVGDLDVNVTDSQLF 53
Query: 92 SIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNW 151
F G VS +V R+ T S GYG++ F + A R +Q N +P + R+ +
Sbjct: 54 DAFSQMGPVVSVRVCRDLATRRSLGYGYVNFTNPQDAARAIQELN--YIPLYGKPIRVMY 111
Query: 152 ATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGY 211
+ RR G IF+ +L + L +TF +V+ ++ KV D ++G+SKGY
Sbjct: 112 SHRDPSVRRSGAG---NIFIKNLDESIDHKALHDTF-SVFGNIVSCKVAVD-SSGQSKGY 166
Query: 212 GFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEND 271
GFV++ +E +++ ++NG+L + + + +GP + Q + +T T+
Sbjct: 167 GFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRR------QERDSTANKTK------- 213
Query: 272 PNNTTIFVGGLDPSVTDDILKTVFGQYGEL---VHVKIPAGKR--CGFVQFAN 319
T ++V L S TDD LK FG+YG++ V +K GK GFV F N
Sbjct: 214 --FTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGDGKSKGFGFVNFEN 264
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 87/189 (46%), Gaps = 22/189 (11%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L + + + FG G+ S V+++ S+G+GF+ F + A R +++
Sbjct: 216 NVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGDGK-SKGFGFVNFENADDAARAVES 274
Query: 135 FNGTQMPS---------------TEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVT 179
NG + TE R A ++ Q ++V +L ++
Sbjct: 275 LNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSS----NLYVKNLDPSIS 330
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
D L+E F + + +V KV+ D G SKG GFV F E +M++++G + ++P+
Sbjct: 331 DEKLKEIF-SPFGTVTSCKVMRD-PNGTSKGSGFVAFSTPEEATEAMSQLSGKMIESKPL 388
Query: 240 RIGPAATKK 248
+ A K+
Sbjct: 389 YVAIAQRKE 397
>gi|77695912|ref|NP_001029097.1| nucleolysin TIAR isoform 2 [Homo sapiens]
gi|73998714|ref|XP_852319.1| PREDICTED: nucleolysin TIAR isoform 2 [Canis lupus familiaris]
gi|114633030|ref|XP_001154768.1| PREDICTED: nucleolysin TIAR isoform 6 [Pan troglodytes]
gi|311271911|ref|XP_003133244.1| PREDICTED: nucleolysin TIAR isoform 2 [Sus scrofa]
gi|338716472|ref|XP_003363459.1| PREDICTED: nucleolysin TIAR [Equus caballus]
gi|390473251|ref|XP_003734574.1| PREDICTED: nucleolysin TIAR isoform 2 [Callithrix jacchus]
gi|395827973|ref|XP_003787162.1| PREDICTED: nucleolysin TIAR isoform 1 [Otolemur garnettii]
gi|397510639|ref|XP_003825700.1| PREDICTED: nucleolysin TIAR isoform 2 [Pan paniscus]
gi|402881652|ref|XP_003904380.1| PREDICTED: nucleolysin TIAR isoform 2 [Papio anubis]
gi|426253186|ref|XP_004020281.1| PREDICTED: nucleolysin TIAR isoform 2 [Ovis aries]
gi|426366374|ref|XP_004050233.1| PREDICTED: nucleolysin TIAR isoform 2 [Gorilla gorilla gorilla]
gi|158255404|dbj|BAF83673.1| unnamed protein product [Homo sapiens]
gi|380783709|gb|AFE63730.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|383408327|gb|AFH27377.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|384942768|gb|AFI34989.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|410218476|gb|JAA06457.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410257384|gb|JAA16659.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410296998|gb|JAA27099.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
Length = 392
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 129/261 (49%), Gaps = 20/261 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIR----NKQTNFSEG-----------YG 118
R+L++G+L + E I +F G S K+I +++ N S G Y
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYC 68
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADV 178
F+EF H A L NG ++ E ++NWAT + +++ D F +FVGDL+ ++
Sbjct: 69 FVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEI 125
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T ++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G R
Sbjct: 126 TTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 184
Query: 239 MRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+R A K A + T Q + ++ P N T++ GG+ +TD +++ F
Sbjct: 185 IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSP 244
Query: 298 YGELVHVKIPAGKRCGFVQFA 318
+G+++ +++ K FV+F+
Sbjct: 245 FGQIMEIRVFPEKGYSFVRFS 265
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 175
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDG---------------PDFTIFVGDLAADV 178
G + + R NWAT A + Q++ + T++ G +A+ +
Sbjct: 176 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 233
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 234 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 279
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 80/181 (44%), Gaps = 39/181 (21%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTD----RTTGRSKG------ 210
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ R S G
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEQPDSRRVNSSVGFSVLQH 61
Query: 211 -----YGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQG 265
Y FV F + + ++ MNG + G++ K + T
Sbjct: 62 TSNDPYCFVEFYEHRDAAAALAAMNG----------------RKILGKEV-KVNWATTPS 104
Query: 266 SQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFAN 319
SQ ++ N+ +FVG L P +T + +K+ F +G++ ++ K GFV F N
Sbjct: 105 SQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYN 164
Query: 320 R 320
+
Sbjct: 165 K 165
>gi|444321552|ref|XP_004181432.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
gi|387514476|emb|CCH61913.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
Length = 577
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 119/250 (47%), Gaps = 25/250 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++G+L P + E+ + IF G S +V R+ T S GY ++ F H A + ++
Sbjct: 44 SLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGKTAIEK 103
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T + + R+ W+ R++ G IF+ +L D+ + L ETF +V+ ++
Sbjct: 104 LNYTAIKG--RPCRIMWSQRDPSMRKKGSG---NIFIKNLHPDIDNKTLYETF-SVFGNI 157
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
K+ D TG+SKG+GFV F +E ++ +NG+L + + + + P +KK
Sbjct: 158 LSCKIANDE-TGKSKGFGFVHFENEEAAREAIDAINGMLLNGQEVYVAPHVSKK------ 210
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP-----AG 309
+ Q E N T ++V LD T++ + +F YG + V +
Sbjct: 211 -------DRQSKLDEARANFTNVYVKNLDLEATEEDFENLFKPYGTITSVALEKDAEGKS 263
Query: 310 KRCGFVQFAN 319
+ GFV F N
Sbjct: 264 RGFGFVDFEN 273
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 67 DASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHA 126
D + ++++ +L E ++F G S + ++ + S G+GF++F +H
Sbjct: 217 DEARANFTNVYVKNLDLEATEEDFENLFKPYGTITSVALEKDAEGK-SRGFGFVDFENHE 275
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDF--------------TIFVG 172
A + ++ N T+ Y ER Q+ + +F+
Sbjct: 276 DAVKAVEALNDTEYKGQTLYVGRAQKKY---ERLQELKKQYQASKLEKLAKYQGINLFIK 332
Query: 173 DLAADVTDYVLQETFRAVYSSVKGAKVVTDRT-TGRSKGYGFVRFGDESEQLRSMTEMNG 231
+L + D L+E F A + ++ A+V+ RT G+SKG+GFV F E R++TE N
Sbjct: 333 NLDDSIDDEKLKEEF-APFGTITSARVM--RTENGKSKGFGFVCFSTPEEATRAITEKNQ 389
Query: 232 VLCSTRPMRIGPAATKKAATGQQYQKATYQN 262
+ + +P+ + A K Q Q+ +N
Sbjct: 390 QIVAGKPLYVAIAQRKDVRRSQLAQQIQARN 420
>gi|449267712|gb|EMC78625.1| Nucleolysin TIA-1 isoform p40, partial [Columba livia]
Length = 361
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 126/242 (52%), Gaps = 7/242 (2%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFN 136
++G+L + E+ I +F G + K+I + N + Y F+EF H A L N
Sbjct: 1 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFYEHRHAAAALAAMN 58
Query: 137 GTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKG 196
G ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A + +
Sbjct: 59 GRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAF-APFGRISD 114
Query: 197 AKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ 256
A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A Y+
Sbjct: 115 ARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYE 174
Query: 257 KATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFV 315
T Q + ++ P+N T++ GG+ +T+ +++ F +G+++ +++ K FV
Sbjct: 175 ANTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFV 234
Query: 316 QF 317
+F
Sbjct: 235 RF 236
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 88 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 147
Query: 136 NGTQMPSTEQNFRLNWA---------TYGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWA TY A ++ Q + T++ G + + +
Sbjct: 148 GGQWLGGRQ--IRTNWATRKPPAPKSTYEANTKQLSYDEVVNQSSPSNCTVYCGGVTSGL 205
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 206 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNG 251
>gi|50293737|ref|XP_449280.1| hypothetical protein [Candida glabrata CBS 138]
gi|74690665|sp|Q6FKG4.1|PABP_CANGA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49528593|emb|CAG62254.1| unnamed protein product [Candida glabrata]
Length = 579
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 129/250 (51%), Gaps = 25/250 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + E+++ IF G S +V R+ T S GY ++ F H AA+ ++
Sbjct: 36 SLYVGDLDPSVSEAHLYDIFSPIGAVSSIRVCRDAITKTSLGYAYVNFNDHDAAKTAIEK 95
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ W+ R++ G IF+ +L D+ + L +TF +V+ ++
Sbjct: 96 LNFT--PIKGKLCRIMWSQRDPSLRKKGAG---NIFIKNLHPDIDNKALYDTF-SVFGNI 149
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
+KV TD TG+SKG+G+V F ++ ++ +NG+L + + + +GP +KK
Sbjct: 150 LSSKVATDE-TGKSKGFGYVHFEEDESASEAIDALNGMLLNGQEIYVGPHLSKKE----- 203
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGE---LVHVKIPAG-- 309
+++ ++ E N T +++ ++ TD + + ++G+ +V + P G
Sbjct: 204 -RESKFE-------EMKANFTNVYIKNINTETTDKEFEELVAKFGKTDSVVLERTPEGEN 255
Query: 310 KRCGFVQFAN 319
K GFV F N
Sbjct: 256 KGFGFVNFVN 265
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 115/263 (43%), Gaps = 20/263 (7%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L P ++ + F G +S KV + +T S+G+G++ F
Sbjct: 115 PSLRKKGAGNIFIKNLHPDIDNKALYDTFSVFGNILSSKVATD-ETGKSKGFGYVHFEED 173
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQ 184
+A + NG + E + + + ++ +FT +++ ++ + TD +
Sbjct: 174 ESASEAIDALNGMLLNGQEIYVGPHLSKKERESKFEEMKANFTNVYIKNINTETTDKEFE 233
Query: 185 ETFRAVYSSVKGAKVVTDRT-TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
E V K VV +RT G +KG+GFV F + + ++ + E+N +P+ +
Sbjct: 234 EL---VAKFGKTDSVVLERTPEGENKGFGFVNFVNHEDAVKCVEELNNTEFKGQPLYVNR 290
Query: 244 AATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGE 300
A K + +QY+ + QG N +F+ LD S+ D L+ F YG
Sbjct: 291 AQKKYERQQELKKQYEATRMEKMAKYQGIN------LFIKNLDDSIDDKKLEEEFAPYGT 344
Query: 301 LVHVKIPA-----GKRCGFVQFA 318
+ K+ K GFV F+
Sbjct: 345 ITSAKVMTTENGKSKGFGFVCFS 367
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 19/163 (11%)
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDF------ 167
++G+GF+ FV+H A + ++ N T+ Q +N A ER+Q+ +
Sbjct: 255 NKGFGFVNFVNHEDAVKCVEELNNTEFKG--QPLYVNRAQKKY-ERQQELKKQYEATRME 311
Query: 168 --------TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDE 219
+F+ +L + D L+E F A Y ++ AKV+T G+SKG+GFV F
Sbjct: 312 KMAKYQGINLFIKNLDDSIDDKKLEEEF-APYGTITSAKVMTTEN-GKSKGFGFVCFSTP 369
Query: 220 SEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN 262
E +++TE N + + +P+ + A K Q Q+ +N
Sbjct: 370 EEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQARN 412
>gi|426223382|ref|XP_004005854.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Ovis aries]
gi|440907815|gb|ELR57912.1| Nucleolysin TIA-1 isoform p40 [Bos grunniens mutus]
Length = 386
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 129/255 (50%), Gaps = 16/255 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFYEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ Q F +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 303 HVKIPAGKRCGFVQF 317
+++ K FV+F
Sbjct: 242 EIRVFPDKGYSFVRF 256
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 136 NGTQMPSTEQNFRLNWAT---------YGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWAT Y + ++ Q + T++ G + + +
Sbjct: 168 GGQWLGGRQ--IRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGL 225
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 226 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNG 271
>gi|22208507|gb|AAM94322.1| putative oligouridylate binding protein [Sorghum bicolor]
Length = 581
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 138/288 (47%), Gaps = 28/288 (9%)
Query: 49 PQPVPPPSQQTQPY---GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKV 105
P P + Q +P + P S RS+++G++ + ++ + +F G K+
Sbjct: 39 PHPGLLAAPQMEPIVSGNLPPGFDSSTCRSVYVGNISLQVTDTVLQEVFQSIGPVEGCKL 98
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
IR ++++F GFI++ A + + NG P Q ++NWA +R+D
Sbjct: 99 IRKEKSSF----GFIDYYDRRYAALAILSLNGR--PLYGQPIKVNWAY--TSTQREDTSG 150
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
F IFVGDL +VTD L F YS+ A+V+ D+ TGRS+G+GFV F ++ + +
Sbjct: 151 HFNIFVGDLCPEVTDATLFAFFSG-YSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSA 209
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQGENDPNN------- 274
+ ++NG R +R ATK A G++ Q K N G+ +PN
Sbjct: 210 INDLNGKWLGNRQIRCN-WATKGANAGEEKQIVDSKVDLTNGTSESGKENPNEDGPESNP 268
Query: 275 --TTIFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFA 318
TT++VG L T++ + F G + V++ K GFV+++
Sbjct: 269 QFTTVYVGNLPHEATNNDVHLFFHSLGAGSIEEVRVTRDKGFGFVRYS 316
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 35/199 (17%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
+ G ++++GDL P + ++ + + F +V+ +++T S G+GF+ F + A+
Sbjct: 148 TSGHFNIFVGDLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ 207
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYGA--GERRQ---------------------DDGPD 166
+ NG + + + R NWAT GA GE +Q +DGP+
Sbjct: 208 SAINDLNGKWLGN--RQIRCNWATKGANAGEEKQIVDSKVDLTNGTSESGKENPNEDGPE 265
Query: 167 -----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
T++VG+L + T+ + F ++ GA + + R KG+GFVR+ E
Sbjct: 266 SNPQFTTVYVGNLPHEATNNDVHLFFHSL-----GAGSIEEVRVTRDKGFGFVRYSTHEE 320
Query: 222 QLRSMTEMNGVLCSTRPMR 240
+++ NG L R ++
Sbjct: 321 AAQAIQMANGQLIGGRQIK 339
>gi|313226301|emb|CBY21445.1| unnamed protein product [Oikopleura dioica]
Length = 471
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 117/236 (49%), Gaps = 18/236 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L E+ + ++F G V K+I + + S Y FI + +H A+R L
Sbjct: 47 RTLYVGNLHKNATENVLKALFAVIGNVVDIKMINDAALSTSH-YCFITYETHVGAQRALA 105
Query: 134 TFNGT---QMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
NG +MP ++NWAT G ++ D D IFVGDLA ++T LQ F
Sbjct: 106 AMNGRDVYKMP-----LKVNWATRPDGIKK-DTSKDHHIFVGDLAQELTTLDLQNEFEK- 158
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
+ + A+VV D T RSKGYGFV F + ++TEMN R +R A ++K
Sbjct: 159 FGKISEARVVRDAQTNRSKGYGFVAFLKKESAEMAITEMNNKSICGREVRTNWATSRK-- 216
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSV-TDDILKTVFGQYGELVHVK 305
T + + +NTT++VGG+ V T +L+ F ++G + V+
Sbjct: 217 ----LPPPTVIDPHKVAQASSFSNTTVYVGGITKDVHTQQVLQASFSRFGVVEEVR 268
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 95/226 (42%), Gaps = 26/226 (11%)
Query: 59 TQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYG 118
T+P G+ D S D +++GDL + + + F G+ +V+R+ QTN S+GYG
Sbjct: 123 TRPDGIKKDTSKD--HHIFVGDLAQELTTLDLQNEFEKFGKISEARVVRDAQTNRSKGYG 180
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA-------GERRQDDGPDF---T 168
F+ F+ +AE + N + E R NWAT + F T
Sbjct: 181 FVAFLKKESAEMAITEMNNKSICGRE--VRTNWATSRKLPPPTVIDPHKVAQASSFSNTT 238
Query: 169 IFVGDLAADV-TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++VG + DV T VLQ +F VV + T + +GFV+ ++
Sbjct: 239 VYVGGITKDVHTQQVLQASFSRF-------GVVEEVRTFET--FGFVKMQTHQAATNAIC 289
Query: 228 EMNGVLCS--TRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEND 271
EMNG S T R G K + G Y+ GSQ ++
Sbjct: 290 EMNGASISGCTVKCRWGKDDHKSSNDGNHQYGHNYKEANGSQNSSN 335
>gi|115497910|ref|NP_001069577.1| nucleolysin TIA-1 isoform p40 [Bos taurus]
gi|111308630|gb|AAI20428.1| TIA1 cytotoxic granule-associated RNA binding protein [Bos taurus]
gi|296482421|tpg|DAA24536.1| TPA: TIA1 cytotoxic granule-associated RNA binding protein [Bos
taurus]
Length = 384
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 129/255 (50%), Gaps = 16/255 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFYEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ Q F +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 303 HVKIPAGKRCGFVQF 317
+++ K FV+F
Sbjct: 242 EIRVFPDKGYSFVRF 256
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 136 NGTQMPSTEQNFRLNWAT---------YGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWAT Y + ++ Q + T++ G + + +
Sbjct: 168 GGQWLGGRQ--IRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGL 225
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 226 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNG 271
>gi|357514131|ref|XP_003627354.1| RNA-binding protein [Medicago truncatula]
gi|355521376|gb|AET01830.1| RNA-binding protein [Medicago truncatula]
Length = 389
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 132/263 (50%), Gaps = 27/263 (10%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
RS+++G++ + E + +F TG K+ R ++++ YGFI + +A +
Sbjct: 23 CRSVYVGNVHTQVTEPLLQEVFAGTGPVEGCKLFRKEKSS----YGFIHYFDRRSAALAI 78
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
T NG + Q ++NWA Y +G+R +D + IFVGDL+ +VTD L F +VY
Sbjct: 79 LTLNGRHLFG--QPIKVNWA-YASGQR-EDTSGHYNIFVGDLSPEVTDATLFACF-SVYQ 133
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
S A+V+ D+ TGRS+G+GFV F + + ++ ++ G +R +R ATK A
Sbjct: 134 SCSDARVMWDQKTGRSRGFGFVSFRSQQDAQSAINDLTGKWLGSRQIRCN-WATKGAGGI 192
Query: 253 QQYQ----KATYQNTQGSQG-----------ENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
++ Q K+ + T GS EN+P TT++VG L T L F
Sbjct: 193 EEKQNSDSKSVVELTNGSSEDGKEISSNDVPENNPQYTTVYVGNLGSEATQLDLHRHFHA 252
Query: 298 YGELV--HVKIPAGKRCGFVQFA 318
G V V++ K GFV+++
Sbjct: 253 LGAGVIEEVRVQRDKGFGFVRYS 275
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 90/212 (42%), Gaps = 39/212 (18%)
Query: 55 PSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFS 114
P + Y + G ++++GDL P + ++ + + F +V+ +++T S
Sbjct: 90 PIKVNWAYASGQREDTSGHYNIFVGDLSPEVTDATLFACFSVYQSCSDARVMWDQKTGRS 149
Query: 115 EGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAG--ERRQ----------- 161
G+GF+ F S A+ + G + S + R NWAT GAG E +Q
Sbjct: 150 RGFGFVSFRSQQDAQSAINDLTGKWLGS--RQIRCNWATKGAGGIEEKQNSDSKSVVELT 207
Query: 162 ----DDGPDF-------------TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRT 204
+DG + T++VG+L ++ T L F A+ GA V+ +
Sbjct: 208 NGSSEDGKEISSNDVPENNPQYTTVYVGNLGSEATQLDLHRHFHAL-----GAGVIEEVR 262
Query: 205 TGRSKGYGFVRFGDESEQLRS--MTEMNGVLC 234
R KG+GFVR+ +E + M LC
Sbjct: 263 VQRDKGFGFVRYSTHAEAALAIQMGNAQSYLC 294
>gi|256271306|gb|EEU06376.1| Pab1p [Saccharomyces cerevisiae JAY291]
Length = 577
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 121/244 (49%), Gaps = 25/244 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL+P + E+++ IF G S +V R+ T S GY ++ F H A + ++
Sbjct: 39 SLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQ 98
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ W+ R++ G IF+ +L D+ + L +TF +V+ +
Sbjct: 99 LNYT--PIKGRLCRIMWSQRDPSLRKKGSG---NIFIKNLHPDIDNKALYDTF-SVFGDI 152
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ- 253
+K+ TD G+SKG+GFV F +E ++ +NG+L + + + + P ++K Q
Sbjct: 153 LSSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQL 211
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA---GK 310
+ KA Y T ++V ++ TD+ + +F ++G +V + GK
Sbjct: 212 EETKAHY--------------TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGK 257
Query: 311 RCGF 314
GF
Sbjct: 258 LKGF 261
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 113/256 (44%), Gaps = 16/256 (6%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L P ++ + F G+ +S K+ ++ S+G+GF+ F
Sbjct: 118 PSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGK-SKGFGFVHFEEE 176
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQ 184
AA+ + NG + E + + + ++ +T ++V ++ ++ TD Q
Sbjct: 177 GAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQ 236
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
E F A + + A + D G+ KG+GFV + + ++++ +N + + +G A
Sbjct: 237 ELF-AKFGPIVSASLEKD-ADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRA 294
Query: 245 ATKKA---ATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
K +QY+ + QG N +FV LD SV D+ L+ F YG +
Sbjct: 295 QKKNERMHVLKKQYEAYRLEKMAKYQGVN------LFVKNLDDSVDDEKLEEEFAPYGTI 348
Query: 302 VHVKI---PAGKRCGF 314
K+ GK GF
Sbjct: 349 TSAKVMRTENGKSKGF 364
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 92/200 (46%), Gaps = 16/200 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+L++ ++ + +F G VS + ++ +G+GF+ + H A + ++
Sbjct: 220 NLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKL-KGFGFVNYEKHEDAVKAVEA 278
Query: 135 FNGTQMP--------STEQNFRLNWATYGAGERRQDDGPDF---TIFVGDLAADVTDYVL 183
N +++ + ++N R++ R + + +FV +L V D L
Sbjct: 279 LNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKL 338
Query: 184 QETFRAVYSSVKGAKVVTDRT-TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
+E F A Y ++ AKV+ RT G+SKG+GFV F E +++TE N + + +P+ +
Sbjct: 339 EEEF-APYGTITSAKVM--RTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVA 395
Query: 243 PAATKKAATGQQYQKATYQN 262
A K Q Q+ +N
Sbjct: 396 IAQRKDVRRSQLAQQIQARN 415
>gi|301759213|ref|XP_002915456.1| PREDICTED: nucleolysin TIAR-like [Ailuropoda melanoleuca]
Length = 477
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 124/245 (50%), Gaps = 7/245 (2%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
S ++G+L + E I +F G S K+I +N + Y F+EF H A L
Sbjct: 112 SGYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALAA 169
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A + +
Sbjct: 170 MNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAF-APFGKI 225
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
A+VV D TG+SKGYGFV F ++ + ++ M G R +R A K A
Sbjct: 226 SDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKST 285
Query: 255 YQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
+ T Q + ++ P N T++ GG+ +TD +++ F +G+++ +++ K
Sbjct: 286 QENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYS 345
Query: 314 FVQFA 318
FV+F+
Sbjct: 346 FVRFS 350
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 201 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 260
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDG---------------PDFTIFVGDLAADV 178
G + + R NWAT A + Q++ + T++ G +A+ +
Sbjct: 261 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 318
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 319 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 364
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 26/157 (16%)
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
+VG+L+ DVT+ ++ + F + K K++T+ T+ + Y FV F + + ++ M
Sbjct: 114 YVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEHTS--NDPYCFVEFYEHRDAAAALAAM 170
Query: 230 NGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDD 289
NG + G++ K + T SQ ++ N+ +FVG L P +T +
Sbjct: 171 NG----------------RKILGKEV-KVNWATTPSSQKKDTSNHFHVFVGDLSPEITTE 213
Query: 290 ILKTVFGQYGELVHVKIP------AGKRCGFVQFANR 320
+K+ F +G++ ++ K GFV F N+
Sbjct: 214 DIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNK 250
>gi|6678349|ref|NP_033409.1| nucleolysin TIAR [Mus musculus]
gi|61557246|ref|NP_001013211.1| nucleolysin TIAR [Rattus norvegicus]
gi|2500589|sp|P70318.1|TIAR_MOUSE RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-related protein
gi|1592563|gb|AAC52870.1| RNA binding protein TIAR [Mus musculus]
gi|12848609|dbj|BAB28019.1| unnamed protein product [Mus musculus]
gi|60552455|gb|AAH91409.1| Tia1 cytotoxic granule-associated RNA binding protein-like 1
[Rattus norvegicus]
gi|148685702|gb|EDL17649.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_c [Mus musculus]
gi|149067621|gb|EDM17173.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_a [Rattus norvegicus]
Length = 392
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 129/261 (49%), Gaps = 20/261 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIR----NKQTNFSEG-----------YG 118
R+L++G+L + E I +F G S K+I +++ N S G Y
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYC 68
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADV 178
F+EF H A L NG ++ E ++NWAT + +++ D F +FVGDL+ ++
Sbjct: 69 FVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEI 125
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T ++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G R
Sbjct: 126 TTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 184
Query: 239 MRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+R A K A + T Q + ++ P N T++ GG+ +TD +++ F
Sbjct: 185 IRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSP 244
Query: 298 YGELVHVKIPAGKRCGFVQFA 318
+G+++ +++ K FV+F+
Sbjct: 245 FGQIMEIRVFPEKGYSFVRFS 265
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 175
Query: 136 NGTQMPSTEQNFRLNWATY-----------GAGERRQDDG------PDFTIFVGDLAADV 178
G + + R NWAT + R +D + T++ G +A+ +
Sbjct: 176 GGQWLGGRQ--IRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 233
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 234 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 279
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 80/181 (44%), Gaps = 39/181 (21%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTD----RTTGRSKG------ 210
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ R S G
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEQPDSRRVNSSVGFSVLQH 61
Query: 211 -----YGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQG 265
Y FV F + + ++ MNG + G++ K + T
Sbjct: 62 TSNDPYCFVEFYEHRDAAAALAAMNG----------------RKILGKEV-KVNWATTPS 104
Query: 266 SQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFAN 319
SQ ++ N+ +FVG L P +T + +K+ F +G++ ++ K GFV F N
Sbjct: 105 SQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYN 164
Query: 320 R 320
+
Sbjct: 165 K 165
>gi|413920411|gb|AFW60343.1| putative oligouridylate binding protein [Zea mays]
Length = 425
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 131/270 (48%), Gaps = 25/270 (9%)
Query: 64 VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFV 123
+ P S RS+++G++ + ++ + +F G K+IR ++++F GFI++
Sbjct: 109 LPPGFDSSTCRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKSSF----GFIDYY 164
Query: 124 SHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
A + + NG Q+ Q ++NWA R+D F IFVGDL +VTD L
Sbjct: 165 DRRYAALAILSLNGRQLYG--QPIKVNWAY--TSTPREDTSGHFNIFVGDLCPEVTDATL 220
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
F YS+ A+V+ D+ TGRS+G+GFV F ++ + ++ ++NG R +R
Sbjct: 221 FAFFSG-YSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIRCN- 278
Query: 244 AATKKAATGQQYQ----KATYQNTQGSQG---------ENDPNNTTIFVGGLDPSVTDDI 290
ATK A G++ Q K N G EN+P TT++VG L T +
Sbjct: 279 WATKGANAGEEKQILDTKVDLSNGSSESGKENPNEDGPENNPQFTTVYVGNLPHEATMND 338
Query: 291 LKTVFGQY--GELVHVKIPAGKRCGFVQFA 318
+ F G + V++ K GFV+++
Sbjct: 339 VHLFFHSLGAGSIEEVRVTRDKGFGFVRYS 368
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 35/214 (16%)
Query: 55 PSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFS 114
P + Y P + G ++++GDL P + ++ + + F +V+ +++T S
Sbjct: 185 PIKVNWAYTSTPREDTSGHFNIFVGDLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGRS 244
Query: 115 EGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQ----------- 161
G+GF+ F + A+ + NG + + + R NWAT G AGE +Q
Sbjct: 245 RGFGFVSFRNQQDAQSAINDLNGKWLGNRQ--IRCNWATKGANAGEEKQILDTKVDLSNG 302
Query: 162 ----------DDGPD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTG 206
+DGP+ T++VG+L + T + F ++ GA + +
Sbjct: 303 SSESGKENPNEDGPENNPQFTTVYVGNLPHEATMNDVHLFFHSL-----GAGSIEEVRVT 357
Query: 207 RSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
R KG+GFVR+ E ++ NG L R ++
Sbjct: 358 RDKGFGFVRYSTHEEAALAIQMGNGQLIGGRQIK 391
>gi|349577826|dbj|GAA22994.1| K7_Pab1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 577
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 121/244 (49%), Gaps = 25/244 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL+P + E+++ IF G S +V R+ T S GY ++ F H A + ++
Sbjct: 39 SLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQ 98
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ W+ R++ G IF+ +L D+ + L +TF +V+ +
Sbjct: 99 LNYT--PIKGRLCRIMWSQRDPSLRKKGSG---NIFIKNLHPDIDNKALYDTF-SVFGDI 152
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ- 253
+K+ TD G+SKG+GFV F +E ++ +NG+L + + + + P ++K Q
Sbjct: 153 LSSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQL 211
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA---GK 310
+ KA Y T ++V ++ TD+ + +F ++G +V + GK
Sbjct: 212 EETKAHY--------------TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGK 257
Query: 311 RCGF 314
GF
Sbjct: 258 LKGF 261
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 113/256 (44%), Gaps = 16/256 (6%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L P ++ + F G+ +S K+ ++ S+G+GF+ F
Sbjct: 118 PSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGK-SKGFGFVHFEEE 176
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQ 184
AA+ + NG + E + + + ++ +T ++V ++ ++ TD Q
Sbjct: 177 GAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQ 236
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
E F A + + A + D G+ KG+GFV + + ++++ +N + + +G A
Sbjct: 237 ELF-AKFGPIVSASLEKD-ADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRA 294
Query: 245 ATKKA---ATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
K +QY+ + QG N +FV LD SV D+ L+ F YG +
Sbjct: 295 QKKNERMHVLKKQYEAYRLEKMAKYQGVN------LFVKNLDDSVDDEKLEEEFAPYGTI 348
Query: 302 VHVKI---PAGKRCGF 314
K+ GK GF
Sbjct: 349 TSAKVMRTENGKSKGF 364
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 92/200 (46%), Gaps = 16/200 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+L++ ++ + +F G VS + ++ +G+GF+ + H A + ++
Sbjct: 220 NLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKL-KGFGFVNYEKHEDAVKAVEA 278
Query: 135 FNGTQMP--------STEQNFRLNWATYGAGERRQDDGPDF---TIFVGDLAADVTDYVL 183
N +++ + ++N R++ R + + +FV +L V D L
Sbjct: 279 LNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKL 338
Query: 184 QETFRAVYSSVKGAKVVTDRT-TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
+E F A Y ++ AKV+ RT G+SKG+GFV F E +++TE N + + +P+ +
Sbjct: 339 EEEF-APYGTITSAKVM--RTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVA 395
Query: 243 PAATKKAATGQQYQKATYQN 262
A K Q Q+ +N
Sbjct: 396 IAQRKDVRRSQLAQQIQARN 415
>gi|23928438|gb|AAN40024.1| putative oligouridylate binding protein [Zea mays]
Length = 639
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 131/268 (48%), Gaps = 25/268 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P S RS+++G++ + ++ + +F G K+IR ++++F GFI++
Sbjct: 111 PGFDSSTCRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKSSF----GFIDYYDR 166
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A + + NG Q+ Q ++NWA R+D F IFVGDL +VTD L
Sbjct: 167 RYAALAILSLNGRQLYG--QPIKVNWAY--TSTPREDTSGHFNIFVGDLCPEVTDATLFA 222
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F YS+ A+V+ D+ TGRS+G+GFV F ++ + ++ ++NG R +R A
Sbjct: 223 FFSG-YSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIRCN-WA 280
Query: 246 TKKAATGQQYQ----KATYQNTQGSQGENDPNN---------TTIFVGGLDPSVTDDILK 292
TK A G++ Q K N G+ +PN+ TT++VG L T + +
Sbjct: 281 TKGANAGEEKQILDTKVDLSNGSSESGKENPNDDGPENNPQFTTVYVGNLPHEATMNDVH 340
Query: 293 TVFGQY--GELVHVKIPAGKRCGFVQFA 318
F G + V++ K GFV+++
Sbjct: 341 LFFHSLGAGSIEEVRVTRDKGFGFVRYS 368
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 35/214 (16%)
Query: 55 PSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFS 114
P + Y P + G ++++GDL P + ++ + + F +V+ +++T S
Sbjct: 185 PIKVNWAYTSTPREDTSGHFNIFVGDLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGRS 244
Query: 115 EGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQ----------- 161
G+GF+ F + A+ + NG + + + R NWAT G AGE +Q
Sbjct: 245 RGFGFVSFRNQQDAQSAINDLNGKWLGN--RQIRCNWATKGANAGEEKQILDTKVDLSNG 302
Query: 162 ----------DDGPD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTG 206
DDGP+ T++VG+L + T + F ++ GA + +
Sbjct: 303 SSESGKENPNDDGPENNPQFTTVYVGNLPHEATMNDVHLFFHSL-----GAGSIEEVRVT 357
Query: 207 RSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
R KG+GFVR+ E ++ NG L R ++
Sbjct: 358 RDKGFGFVRYSTHEEAALAIQMGNGQLIGGRQIK 391
>gi|172092|gb|AAA34838.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
Length = 577
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 121/244 (49%), Gaps = 25/244 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL+P + E+++ IF G S +V R+ T S GY ++ F H A + ++
Sbjct: 39 SLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQ 98
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ W+ R++ G IF+ +L D+ + L +TF +V+ +
Sbjct: 99 LNYT--PIKGRLCRIMWSQRDPSLRKKGSG---NIFIKNLHPDIDNKALYDTF-SVFGDI 152
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ- 253
+K+ TD G+SKG+GFV F +E ++ +NG+L + + + + P ++K Q
Sbjct: 153 LSSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQL 211
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA---GK 310
+ KA Y T ++V ++ TD+ + +F ++G +V + GK
Sbjct: 212 EETKAHY--------------TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGK 257
Query: 311 RCGF 314
GF
Sbjct: 258 LKGF 261
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 113/256 (44%), Gaps = 16/256 (6%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L P ++ + F G+ +S K+ ++ S+G+GF+ F
Sbjct: 118 PSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGK-SKGFGFVHFEEE 176
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQ 184
AA+ + NG + E + + + ++ +T ++V ++ ++ TD Q
Sbjct: 177 GAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQ 236
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
E F A + + A + D G+ KG+GFV + + ++++ +N + + +G A
Sbjct: 237 ELF-AKFGPIVSASLEKD-ADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRA 294
Query: 245 ATKKA---ATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
K +QY+ + QG N +FV LD SV D+ L+ F YG +
Sbjct: 295 QKKNERMHVLKKQYEAYRLEKMAKYQGVN------LFVKNLDDSVDDEKLEEEFAPYGTI 348
Query: 302 VHVKI---PAGKRCGF 314
K+ GK GF
Sbjct: 349 TSAKVMRTENGKSKGF 364
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 92/200 (46%), Gaps = 16/200 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+L++ ++ + +F G VS + ++ +G+GF+ + H A + ++
Sbjct: 220 NLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKL-KGFGFVNYEKHEDAVKAVEA 278
Query: 135 FNGTQMP--------STEQNFRLNWATYGAGERRQDDGPDF---TIFVGDLAADVTDYVL 183
N +++ + ++N R++ R + + +FV +L V D L
Sbjct: 279 LNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKL 338
Query: 184 QETFRAVYSSVKGAKVVTDRT-TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
+E F A Y ++ AKV+ RT G+SKG+GFV F E +++TE N + + +P+ +
Sbjct: 339 EEEF-APYGTITSAKVM--RTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVA 395
Query: 243 PAATKKAATGQQYQKATYQN 262
A K Q Q+ +N
Sbjct: 396 IAQRKDVRRSQLAQQIQARN 415
>gi|6321013|ref|NP_011092.1| Pab1p [Saccharomyces cerevisiae S288c]
gi|417441|sp|P04147.4|PABP_YEAST RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=ARS consensus-binding protein ACBP-67;
AltName: Full=Polyadenylate tail-binding protein
gi|171967|gb|AAA34787.1| poly (A)-binding protein [Saccharomyces cerevisiae]
gi|218386|dbj|BAA00017.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|603406|gb|AAB64692.1| Pab1p: polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|51013159|gb|AAT92873.1| YER165W [Saccharomyces cerevisiae]
gi|151944882|gb|EDN63141.1| poly(A) binding protein [Saccharomyces cerevisiae YJM789]
gi|207345803|gb|EDZ72507.1| YER165Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259146093|emb|CAY79353.1| Pab1p [Saccharomyces cerevisiae EC1118]
gi|285811799|tpg|DAA07827.1| TPA: Pab1p [Saccharomyces cerevisiae S288c]
gi|365765943|gb|EHN07446.1| Pab1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299869|gb|EIW10961.1| Pab1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 577
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 121/244 (49%), Gaps = 25/244 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL+P + E+++ IF G S +V R+ T S GY ++ F H A + ++
Sbjct: 39 SLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQ 98
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ W+ R++ G IF+ +L D+ + L +TF +V+ +
Sbjct: 99 LNYT--PIKGRLCRIMWSQRDPSLRKKGSG---NIFIKNLHPDIDNKALYDTF-SVFGDI 152
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ- 253
+K+ TD G+SKG+GFV F +E ++ +NG+L + + + + P ++K Q
Sbjct: 153 LSSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQL 211
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA---GK 310
+ KA Y T ++V ++ TD+ + +F ++G +V + GK
Sbjct: 212 EETKAHY--------------TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGK 257
Query: 311 RCGF 314
GF
Sbjct: 258 LKGF 261
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 113/256 (44%), Gaps = 16/256 (6%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L P ++ + F G+ +S K+ ++ S+G+GF+ F
Sbjct: 118 PSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGK-SKGFGFVHFEEE 176
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQ 184
AA+ + NG + E + + + ++ +T ++V ++ ++ TD Q
Sbjct: 177 GAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQ 236
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
E F A + + A + D G+ KG+GFV + + ++++ +N + + +G A
Sbjct: 237 ELF-AKFGPIVSASLEKD-ADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRA 294
Query: 245 ATKKA---ATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
K +QY+ + QG N +FV LD SV D+ L+ F YG +
Sbjct: 295 QKKNERMHVLKKQYEAYRLEKMAKYQGVN------LFVKNLDDSVDDEKLEEEFAPYGTI 348
Query: 302 VHVKI---PAGKRCGF 314
K+ GK GF
Sbjct: 349 TSAKVMRTENGKSKGF 364
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 92/200 (46%), Gaps = 16/200 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+L++ ++ + +F G VS + ++ +G+GF+ + H A + ++
Sbjct: 220 NLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKL-KGFGFVNYEKHEDAVKAVEA 278
Query: 135 FNGTQMP--------STEQNFRLNWATYGAGERRQDDGPDF---TIFVGDLAADVTDYVL 183
N +++ + ++N R++ R + + +FV +L V D L
Sbjct: 279 LNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKL 338
Query: 184 QETFRAVYSSVKGAKVVTDRT-TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
+E F A Y ++ AKV+ RT G+SKG+GFV F E +++TE N + + +P+ +
Sbjct: 339 EEEF-APYGTITSAKVM--RTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVA 395
Query: 243 PAATKKAATGQQYQKATYQN 262
A K Q Q+ +N
Sbjct: 396 IAQRKDVRRSQLAQQIQARN 415
>gi|268533576|ref|XP_002631916.1| Hypothetical protein CBG07904 [Caenorhabditis briggsae]
Length = 411
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 131/262 (50%), Gaps = 19/262 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
+ S+ R+L++G+L P + + ++A++F G KV + ++ + FIEF H
Sbjct: 31 SGSEDPRTLFVGNLDPAITDEFLATLFNQIGAVTKAKVCFD---GMNDPFAFIEFGDHNQ 87
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGA---GERRQDDGPDFTIFVGDLAADVTDYVLQ 184
A + LQ NG + E R+NWA + R+Q+ F +FVGDL+++V L+
Sbjct: 88 AGQALQAMNGRSLLDRE--MRVNWAVDASQPGDSRKQETSRHFHVFVGDLSSEVDSTKLR 145
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
E F A + V AK++ D T ++KGYGFV + + R++ +MNG R +R A
Sbjct: 146 EAFLA-FGDVSEAKIIRDTATNKAKGYGFVSYPRREDAERAIEQMNGQWLGRRTIRTNWA 204
Query: 245 ATKKAATGQQYQKATYQNTQGSQGEN---------DPNNTTIFVGGLDPSVTDDILKTVF 295
K G ++ + + E +NT+++VG ++ +T+D ++ F
Sbjct: 205 TRKPEEEGGGERRDRGERGERRHYEKTFDEIYNQTSADNTSVYVGQIN-QLTEDEIRRAF 263
Query: 296 GQYGELVHVKIPAGKRCGFVQF 317
++G + V++ + FV+F
Sbjct: 264 DRFGPINEVRMFKVQGYAFVKF 285
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 266 SQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
+ G DP T+FVG LDP++TD+ L T+F Q G + K+
Sbjct: 30 ASGSEDP--RTLFVGNLDPAITDEFLATLFNQIGAVTKAKV 68
>gi|348566571|ref|XP_003469075.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Cavia porcellus]
Length = 388
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 129/255 (50%), Gaps = 16/255 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ Q F +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVSQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 303 HVKIPAGKRCGFVQF 317
+++ K FV+F
Sbjct: 242 EIRVFPDKGYSFVRF 256
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 136 NGTQMPSTEQNFRLNWAT---------YGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWAT Y + ++ Q + T++ G + + +
Sbjct: 168 GGQWLGGRQ--IRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPSNCTVYCGGVTSGL 225
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 226 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNG 271
>gi|366987097|ref|XP_003673315.1| hypothetical protein NCAS_0A03680 [Naumovozyma castellii CBS 4309]
gi|342299178|emb|CCC66926.1| hypothetical protein NCAS_0A03680 [Naumovozyma castellii CBS 4309]
Length = 575
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++G+L P + E+ + IF G S +V R+ T S GY ++ F H A ++ ++
Sbjct: 36 SLYVGELDPTVSEALLYDIFSPIGSVSSIRVCRDAVTKTSLGYAYVNFNDHEAGKKAIEQ 95
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ W+ R++ G IF+ +L D+ + L ETF +V+ ++
Sbjct: 96 LNYT--PIKGRLCRIMWSQRDPALRKKGSG---NIFIKNLHPDIDNKALFETF-SVFGNI 149
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
+K+ TD TG+SKG+GFV F ES ++ +NG+L + + + + P T+K Q
Sbjct: 150 LSSKIATDE-TGKSKGFGFVHFEHESSAKEAIDALNGMLLNGQEIYVAPHLTRKERDSQ- 207
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHV---KIPAGKR 311
E + T ++V ++ TD+ +F +YG ++ K GK
Sbjct: 208 ------------LEETKAHFTNVYVKNINLETTDEEFNELFAKYGNVLSSSLEKTEDGKL 255
Query: 312 CGF 314
GF
Sbjct: 256 KGF 258
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 115/262 (43%), Gaps = 18/262 (6%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L P ++ + F G +S K+ + +T S+G+GF+ F
Sbjct: 115 PALRKKGSGNIFIKNLHPDIDNKALFETFSVFGNILSSKIATD-ETGKSKGFGFVHFEHE 173
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQ 184
++A+ + NG + E + + ++ FT ++V ++ + TD
Sbjct: 174 SSAKEAIDALNGMLLNGQEIYVAPHLTRKERDSQLEETKAHFTNVYVKNINLETTDEEFN 233
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
E F A Y +V + + G+ KG+GFV F + +++ E+NG + + + A
Sbjct: 234 ELF-AKYGNVLSSSL-EKTEDGKLKGFGFVDFEKHEDAAKAVEELNGTEFKDQTLFVSRA 291
Query: 245 ATKKA---ATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
K +QY+ + + QG N +FV LD S+ D+ LK F YG +
Sbjct: 292 QKKYERMQELKKQYEASRLEKMAKYQGVN------LFVKNLDDSIDDEKLKEEFAPYGTI 345
Query: 302 VHVKIP-----AGKRCGFVQFA 318
V++ K GFV F+
Sbjct: 346 TSVRVMRTDNGKSKGFGFVCFS 367
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 25/203 (12%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ ++ + +F G +S + + + +G+GF++F H A + ++
Sbjct: 217 NVYVKNINLETTDEEFNELFAKYGNVLSSSLEKTEDGKL-KGFGFVDFEKHEDAAKAVEE 275
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDF--------------TIFVGDLAADVTD 180
NGT+ +Q ++ A ER Q+ + +FV +L + D
Sbjct: 276 LNGTEF--KDQTLFVSRAQ-KKYERMQELKKQYEASRLEKMAKYQGVNLFVKNLDDSIDD 332
Query: 181 YVLQETFRAVYSSVKGAKVV-TDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
L+E F A Y ++ +V+ TD G+SKG+GFV F E +++TE N + + +P+
Sbjct: 333 EKLKEEF-APYGTITSVRVMRTD--NGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPL 389
Query: 240 RIGPAATK---KAATGQQYQKAT 259
+ A K ++ QQ Q T
Sbjct: 390 YVAIAQRKDVRRSQLAQQIQART 412
>gi|344283907|ref|XP_003413712.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Loxodonta
africana]
Length = 386
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 129/255 (50%), Gaps = 16/255 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFYEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ Q F +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 303 HVKIPAGKRCGFVQF 317
+++ K FV+F
Sbjct: 242 EIRVFPDKGYSFVRF 256
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 136 NGTQMPSTEQNFRLNWAT---------YGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWAT Y + ++ Q + T++ G + + +
Sbjct: 168 GGQWLGGRQ--IRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGL 225
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 226 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNG 271
>gi|45383446|ref|NP_989687.1| nucleolysin TIAR isoform 1 [Gallus gallus]
gi|28883275|gb|AAO49721.1| TIAR [Gallus gallus]
Length = 388
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 127/261 (48%), Gaps = 20/261 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVI--------RNKQTNFS-------EGYG 118
R+L++G+L + E I +F G S K+I R FS + Y
Sbjct: 8 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSSRRVNSVGFSVLQHTSNDPYC 67
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADV 178
F+EF H A L NG ++ E ++NWAT + +++ D F +FVGDL+ ++
Sbjct: 68 FVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEI 124
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T ++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G R
Sbjct: 125 TTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 183
Query: 239 MRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+R A K A + T Q + ++ P N T++ GG+ +TD +++ F
Sbjct: 184 IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSP 243
Query: 298 YGELVHVKIPAGKRCGFVQFA 318
+G+++ +++ K FV+F+
Sbjct: 244 FGQIMEIRVFPEKGYSFVRFS 264
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 115 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 174
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDG---------------PDFTIFVGDLAADV 178
G + + R NWAT A + Q++ + T++ G +A+ +
Sbjct: 175 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 232
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 233 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 278
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 39/181 (21%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKG---------- 210
+DDG T++VG+L+ DVT+ ++ + F + K K++T++ +
Sbjct: 2 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEQPDSSRRVNSVGFSVLQH 60
Query: 211 -----YGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQG 265
Y FV F + + ++ MNG + G++ K + T
Sbjct: 61 TSNDPYCFVEFYEHRDAAAALAAMNG----------------RKILGKEV-KVNWATTPS 103
Query: 266 SQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFAN 319
SQ ++ N+ +FVG L P +T + +K+ F +G++ ++ K GFV F N
Sbjct: 104 SQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYN 163
Query: 320 R 320
+
Sbjct: 164 K 164
>gi|225438781|ref|XP_002283105.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|296082381|emb|CBI21386.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 123/250 (49%), Gaps = 27/250 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL+ + +S++ +FG G VS +V R+ T S GYG++ + + A R L
Sbjct: 33 SLYVGDLESNVTDSHLYDLFGQLGPVVSVRVCRDLSTRRSLGYGYVNYGNTQDAARALDM 92
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ ++ RR IF+ +L + + L +TF + + ++
Sbjct: 93 LNFT--PLNGKPIRIMYSFRDPSIRRSGTA---NIFIKNLDKAIDNKALYDTF-STFGAI 146
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
K+ TD +G+SKGYGFV+F +E + ++NG+L + + + +GP K Q+
Sbjct: 147 LSCKIATD-ASGQSKGYGFVQFDNEESAKNATDKLNGMLLNDKQVYVGPFVRK-----QE 200
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI----PAGK 310
+ AT N ++V L S TD+ LK +FG+YG + +
Sbjct: 201 RESAT----------NKTKFNNVYVKNLLESTTDEDLKNIFGEYGPITSAVVMQDGDGKS 250
Query: 311 RC-GFVQFAN 319
+C GFV F N
Sbjct: 251 KCFGFVNFEN 260
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 116/261 (44%), Gaps = 18/261 (6%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S K+ + S+GYGF++F +
Sbjct: 112 PSIRRSGTANIFIKNLDKAIDNKALYDTFSTFGAILSCKIATDASGQ-SKGYGFVQFDNE 170
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
+A+ NG + + +Q + + E + ++V +L TD L+
Sbjct: 171 ESAKNATDKLNGMLL-NDKQVYVGPFVRKQERESATNKTKFNNVYVKNLLESTTDEDLKN 229
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F Y + A V+ D G+SK +GFV F + + RS+ +NG + +G A
Sbjct: 230 IF-GEYGPITSAVVMQD-GDGKSKCFGFVNFENADDAARSVEALNGKKFDDKEWYVGKAQ 287
Query: 246 TK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
K + +++++ + QG N ++V LD S+ DD L+ +F ++G +
Sbjct: 288 KKTEREVELKGRFEQSLKEAVDKFQGLN------LYVKNLDDSIADDKLRELFSEFGTIT 341
Query: 303 HVKI---PAG--KRCGFVQFA 318
K+ P G + GFV F+
Sbjct: 342 SCKVMRDPNGISRGSGFVAFS 362
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 85/185 (45%), Gaps = 14/185 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L + + +IFG G S V+++ S+ +GF+ F + A R ++
Sbjct: 212 NVYVKNLLESTTDEDLKNIFGEYGPITSAVVMQDGDGK-SKCFGFVNFENADDAARSVEA 270
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG + TE+ L + + D ++V +L + D L
Sbjct: 271 LNGKKFDDKEWYVGKAQKKTEREVELKGRFEQSLKEAVDKFQGLNLYVKNLDDSIADDKL 330
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+E F + + ++ KV+ D G S+G GFV F E R++ +MNG + +++P+ +
Sbjct: 331 RELF-SEFGTITSCKVMRD-PNGISRGSGFVAFSTAEEASRALADMNGKMVASKPLYVAL 388
Query: 244 AATKK 248
A K+
Sbjct: 389 AQRKE 393
>gi|73969892|ref|XP_866571.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 9 [Canis lupus
familiaris]
gi|301758208|ref|XP_002914947.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1 [Ailuropoda
melanoleuca]
gi|410954995|ref|XP_003984144.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Felis catus]
gi|431912606|gb|ELK14624.1| Nucleolysin TIA-1 isoform p40 [Pteropus alecto]
Length = 386
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 129/255 (50%), Gaps = 16/255 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFYEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ Q F +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 303 HVKIPAGKRCGFVQF 317
+++ K FV+F
Sbjct: 242 EIRVFPDKGYSFVRF 256
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 136 NGTQMPSTEQNFRLNWAT---------YGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWAT Y + ++ Q + T++ G + + +
Sbjct: 168 GGQWLGGRQ--IRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGL 225
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 226 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNG 271
>gi|357479383|ref|XP_003609977.1| RNA-binding protein [Medicago truncatula]
gi|355511032|gb|AES92174.1| RNA-binding protein [Medicago truncatula]
Length = 245
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 118/225 (52%), Gaps = 14/225 (6%)
Query: 49 PQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRN 108
P + P + + P S RS+++G++ P + E + +F G K+IR
Sbjct: 21 PALITPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVSEPLLQELFSSAGALEGCKLIRK 80
Query: 109 KQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT 168
++++ YGF+++ ++A + T NG + Q+ ++NWA Y G+R +D F
Sbjct: 81 EKSS----YGFVDYFDRSSAAIAIVTLNGRNIFG--QSIKVNWA-YTRGQR-EDTSGHFH 132
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE 228
IFVGDL+ +VTD L F A YSS A+V+ D+ TGRS+G+GFV F ++ E ++ +
Sbjct: 133 IFVGDLSPEVTDATLYACFSA-YSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAIND 191
Query: 229 MNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQGE 269
+ G +R +R ATK A + Q K+ + T G+ GE
Sbjct: 192 LTGKWLGSRQIRCN-WATKGANMNGENQSSESKSVVELTSGTSGE 235
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 29/158 (18%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ V++ +LQE F + +++G K++ + YGFV + D S ++
Sbjct: 47 SVYVGNIHPQVSEPLLQELFSSA-GALEGCKLIRKEKSS----YGFVDYFDRSSAAIAIV 101
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG + GQ K + T+G Q E+ + IFVG L P VT
Sbjct: 102 TLNG----------------RNIFGQSI-KVNWAYTRG-QREDTSGHFHIFVGDLSPEVT 143
Query: 288 DDILKTVFGQYGELVHVKIPAGKRC------GFVQFAN 319
D L F Y ++ ++ GFV F N
Sbjct: 144 DATLYACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRN 181
>gi|326936530|ref|XP_003214306.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Meleagris gallopavo]
Length = 423
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 126/252 (50%), Gaps = 16/252 (6%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFN 136
++G+L + E+ I +F G + K+I + N + Y F+EF H A L N
Sbjct: 50 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFYEHRHAASALAAMN 107
Query: 137 GTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVLQET 186
G ++ E ++NWAT + +++ Q F +FVGDL+ ++T ++
Sbjct: 108 GRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQASQDHFHVFVGDLSPEITTEDIKAA 165
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A
Sbjct: 166 F-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR 224
Query: 247 KKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++ ++
Sbjct: 225 KPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIR 284
Query: 306 IPAGKRCGFVQF 317
+ K FV+F
Sbjct: 285 VFPDKGYSFVRF 296
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 87/204 (42%), Gaps = 27/204 (13%)
Query: 45 VGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGK 104
V W P + V+ AS D +++GDL P + I + F G +
Sbjct: 118 VNWATTPSSQKKDTSSSTVVSTQASQDHFH-VFVGDLSPEITTEDIKAAFAPFGRISDAR 176
Query: 105 VIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWA---------TYG 155
V+++ T S+GYGF+ F + AE +Q G + + R NWA TY
Sbjct: 177 VVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQ--IRTNWATRKPPAPKSTYE 234
Query: 156 AGERR--------QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGR 207
+ ++ Q + T++ G + + +T+ ++++TF + + + +V D
Sbjct: 235 SNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTF-SPFGQIMEIRVFPD----- 288
Query: 208 SKGYGFVRFGDESEQLRSMTEMNG 231
KGY FVRF ++ +NG
Sbjct: 289 -KGYSFVRFNSHESAAHAIVSVNG 311
>gi|323355343|gb|EGA87168.1| Pab1p [Saccharomyces cerevisiae VL3]
Length = 563
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 121/244 (49%), Gaps = 25/244 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL+P + E+++ IF G S +V R+ T S GY ++ F H A + ++
Sbjct: 39 SLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQ 98
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ W+ R++ G IF+ +L D+ + L +TF +V+ +
Sbjct: 99 LNYT--PIKGRLCRIMWSQRDPSLRKKGSG---NIFIKNLHPDIDNKALYDTF-SVFGDI 152
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ- 253
+K+ TD G+SKG+GFV F +E ++ +NG+L + + + + P ++K Q
Sbjct: 153 LSSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQL 211
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA---GK 310
+ KA Y T ++V ++ TD+ + +F ++G +V + GK
Sbjct: 212 EETKAHY--------------TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGK 257
Query: 311 RCGF 314
GF
Sbjct: 258 LKGF 261
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 115/262 (43%), Gaps = 18/262 (6%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L P ++ + F G+ +S K+ ++ S+G+GF+ F
Sbjct: 118 PSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGK-SKGFGFVHFEEE 176
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQ 184
AA+ + NG + E + + + ++ +T ++V ++ ++ TD Q
Sbjct: 177 GAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQ 236
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
E F A + + A + D G+ KG+GFV + + ++++ +N + + +G A
Sbjct: 237 ELF-AKFGPIVSASLEKD-ADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRA 294
Query: 245 ATKKA---ATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
K +QY+ + QG N +FV LD SV D+ L+ F YG +
Sbjct: 295 QKKNERMHVLKKQYEAYRLEKMAKYQGVN------LFVKNLDDSVDDEKLEEEFAPYGTI 348
Query: 302 VHVKIP-----AGKRCGFVQFA 318
K+ K GFV F+
Sbjct: 349 TSAKVMRTENGKSKGFGFVCFS 370
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 92/200 (46%), Gaps = 16/200 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+L++ ++ + +F G VS + ++ +G+GF+ + H A + ++
Sbjct: 220 NLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKL-KGFGFVNYEKHEDAVKAVEA 278
Query: 135 FNGTQMP--------STEQNFRLNWATYGAGERRQDDGPDF---TIFVGDLAADVTDYVL 183
N +++ + ++N R++ R + + +FV +L V D L
Sbjct: 279 LNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKL 338
Query: 184 QETFRAVYSSVKGAKVVTDRT-TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
+E F A Y ++ AKV+ RT G+SKG+GFV F E +++TE N + + +P+ +
Sbjct: 339 EEEF-APYGTITSAKVM--RTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVA 395
Query: 243 PAATKKAATGQQYQKATYQN 262
A K Q Q+ +N
Sbjct: 396 IAQRKDVRRSQLAQQIQARN 415
>gi|67623121|ref|XP_667843.1| poly(a)-binding protein fabm [Cryptosporidium hominis TU502]
gi|54659004|gb|EAL37605.1| poly(a)-binding protein fabm [Cryptosporidium hominis]
Length = 746
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 121/248 (48%), Gaps = 26/248 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL + E+ + IF S ++ R+ T S GY ++ + S A AER L T
Sbjct: 13 SLYVGDLDADVTETMLYEIFNSVAVVSSVRICRDALTRRSLGYAYVNYNSVADAERALDT 72
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T + + R+ W RR +DG +FV +L + + L +TF +++ ++
Sbjct: 73 LNFTCIRG--RPCRIMWCLRDPASRRNNDG---NVFVKNLDKSIDNKTLFDTF-SLFGNI 126
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
K+ TD G+S GYGF+ F +++ +NG + RP+ +G +
Sbjct: 127 MSCKIATD-VEGKSLGYGFIHFEHADSAKEAISRLNGAVLGDRPIYVG-----------K 174
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA---GKR 311
+QK + + E D T ++V + S T+D+L +FG YG++ + + + G+
Sbjct: 175 FQKKAERFS-----EKDKTFTNVYVKHIPKSWTEDLLYKIFGVYGKISSLVLQSDSKGRP 229
Query: 312 CGFVQFAN 319
GFV F N
Sbjct: 230 FGFVNFEN 237
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++V +LA + + L+ F + +V + TD + G S+G+GFV F E +++T
Sbjct: 364 NLYVKNLADSINEEDLRSMFEP-FGTVSSVSIKTDES-GVSRGFGFVSFLSPDEATKAIT 421
Query: 228 EMNGVLCSTRPMRIG 242
EM+ L +P+ +G
Sbjct: 422 EMHLKLVRGKPLYVG 436
>gi|188219591|ref|NP_071505.2| nucleolysin TIA-1 isoform p40 isoform 2 [Homo sapiens]
gi|114577930|ref|XP_001141557.1| PREDICTED: uncharacterized protein LOC459303 isoform 2 [Pan
troglodytes]
gi|397521824|ref|XP_003830986.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Pan paniscus]
gi|206729905|sp|P31483.3|TIA1_HUMAN RecName: Full=Nucleolysin TIA-1 isoform p40; AltName:
Full=RNA-binding protein TIA-1; AltName:
Full=T-cell-restricted intracellular antigen-1;
Short=TIA-1; AltName: Full=p40-TIA-1
gi|62702267|gb|AAX93193.1| unknown [Homo sapiens]
gi|119620230|gb|EAW99824.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_b [Homo sapiens]
gi|261861076|dbj|BAI47060.1| TIA1 cytotoxic granule-associated RNA binding protein [synthetic
construct]
gi|410226260|gb|JAA10349.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410254978|gb|JAA15456.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410298556|gb|JAA27878.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410353839|gb|JAA43523.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 386
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 129/255 (50%), Gaps = 16/255 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ Q F +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 303 HVKIPAGKRCGFVQF 317
+++ K FV+F
Sbjct: 242 EIRVFPDKGYSFVRF 256
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 136 NGTQMPSTEQNFRLNWAT---------YGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWAT Y + ++ Q + T++ G + + +
Sbjct: 168 GGQWLGGRQ--IRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGL 225
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 226 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNG 271
>gi|387762942|ref|NP_001248687.1| TIA1 cytotoxic granule-associated RNA binding protein [Macaca
mulatta]
gi|84579193|dbj|BAE73030.1| hypothetical protein [Macaca fascicularis]
gi|355565763|gb|EHH22192.1| hypothetical protein EGK_05415 [Macaca mulatta]
gi|355751389|gb|EHH55644.1| hypothetical protein EGM_04890 [Macaca fascicularis]
gi|380816026|gb|AFE79887.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
gi|383421173|gb|AFH33800.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
gi|384949108|gb|AFI38159.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
Length = 386
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 129/255 (50%), Gaps = 16/255 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ Q F +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 303 HVKIPAGKRCGFVQF 317
+++ K FV+F
Sbjct: 242 EIRVFPDKGYSFVRF 256
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 136 NGTQMPSTEQNFRLNWAT---------YGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWAT Y + ++ Q + T++ G + + +
Sbjct: 168 GGQWLGGRQ--IRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGL 225
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 226 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNG 271
>gi|390474361|ref|XP_003734771.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Callithrix jacchus]
gi|403260486|ref|XP_003922702.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 386
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 129/255 (50%), Gaps = 16/255 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ Q F +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 303 HVKIPAGKRCGFVQF 317
+++ K FV+F
Sbjct: 242 EIRVFPDKGYSFVRF 256
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 136 NGTQMPSTEQNFRLNWAT---------YGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWAT Y + ++ Q + T++ G + + +
Sbjct: 168 GGQWLGGRQ--IRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGL 225
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 226 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNG 271
>gi|262401121|gb|ACY66463.1| TIA-1-like protein [Scylla paramamosain]
Length = 325
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 124/249 (49%), Gaps = 12/249 (4%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFN 136
++G+L + E I +FG GE S K+ R T + Y F+EF H A + N
Sbjct: 1 YVGNLDNSVTEDLIMMLFGQLGEVRSCKMFREPTT---DPYCFVEFCDHMTALNAITMMN 57
Query: 137 GTQMPSTEQNFRLNWATYGAGERRQ----DDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
+ + + R++WAT G G + + D ++VGDL+ ++ + L+E F+ V+
Sbjct: 58 DKMLQN--RKMRVDWAT-GQGNKNKYTKVDTSRHHHVYVGDLSPEIDEQALREAFQ-VFG 113
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
+ KVV D + +S+GYGFV F + + S++ MNG + ++ A K A T
Sbjct: 114 EISDCKVVKDPQSFKSRGYGFVVFVKKMDAETSISAMNGQWLGRKMIKTRWATRKPANTP 173
Query: 253 QQYQ-KATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKR 311
+ + + N + P NTT+F GGL +T+++L F +G++ +KI K
Sbjct: 174 NETKPEQKKLNYDEVFNQTTPTNTTVFCGGLKQDITEEMLHKSFQPHGQIEKIKIFKEKG 233
Query: 312 CGFVQFANR 320
F+++ ++
Sbjct: 234 YAFIKYTSK 242
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 78/172 (45%), Gaps = 26/172 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P ++E + F GE KV+++ Q+ S GYGF+ FV AE +
Sbjct: 91 VYVGDLSPEIDEQALREAFQVFGEISDCKVVKDPQSFKSRGYGFVVFVKKMDAETSISAM 150
Query: 136 NGTQMPSTEQNFRLNWATYGAGERRQDDGP-----------------DFTIFVGDLAADV 178
NG + + + WAT + P + T+F G L D+
Sbjct: 151 NGQWL--GRKMIKTRWATRKPANTPNETKPEQKKLNYDEVFNQTTPTNTTVFCGGLKQDI 208
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMN 230
T+ +L ++F+ + ++ K+ + KGY F+++ + +++ E++
Sbjct: 209 TEEMLHKSFQP-HGQIEKIKIF------KEKGYAFIKYTSKESACQAIVELH 253
>gi|348507121|ref|XP_003441105.1| PREDICTED: nucleolysin TIAR [Oreochromis niloticus]
Length = 382
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 126/248 (50%), Gaps = 7/248 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I +N + Y F+EF H A L
Sbjct: 8 RTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEHTSN--DPYCFVEFFEHRDAAAALA 65
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL ++T ++ F A +
Sbjct: 66 AMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLNPEITTEDVRVAF-APFGK 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TTG+SKGYGFV F ++ + ++ M+G R +R A K A
Sbjct: 122 ISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIINMSGQWLGGRQIRTNWATRKPPAPKS 181
Query: 254 QYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+ Q ++ P N T++ GG+ +++ +++ F +G+++ V++ K
Sbjct: 182 TQDNGSKQLRFDDVVNQSSPQNCTVYCGGIQSGLSEHLMRQTFSPFGQIMEVRVFPEKGY 241
Query: 313 GFVQFANR 320
F++F++
Sbjct: 242 SFIRFSSH 249
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 82/175 (46%), Gaps = 26/175 (14%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + + F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 98 VFVGDLNPEITTEDVRVAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIINM 157
Query: 136 NGTQMPSTEQNFRLNWATY-----------GAGERRQDD-----GP-DFTIFVGDLAADV 178
+G + + R NWAT G+ + R DD P + T++ G + + +
Sbjct: 158 SGQWLGGRQ--IRTNWATRKPPAPKSTQDNGSKQLRFDDVVNQSSPQNCTVYCGGIQSGL 215
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
+++++++TF + + + +V + KGY F+RF ++ +NG +
Sbjct: 216 SEHLMRQTF-SPFGQIMEVRVFPE------KGYSFIRFSSHDSAAHAIVSVNGTV 263
>gi|351714346|gb|EHB17265.1| Nucleolysin TIA-1 isoform p40 [Heterocephalus glaber]
Length = 386
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 129/255 (50%), Gaps = 16/255 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ Q F +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVSQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 303 HVKIPAGKRCGFVQF 317
+++ K FV+F
Sbjct: 242 EIRVFPDKGYSFVRF 256
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 136 NGTQMPSTEQNFRLNWAT---------YGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWAT Y + ++ Q + T++ G + + +
Sbjct: 168 GGQWLGGRQ--IRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPSNCTVYCGGVTSGL 225
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 226 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNG 271
>gi|84579137|dbj|BAE73002.1| hypothetical protein [Macaca fascicularis]
Length = 385
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 129/255 (50%), Gaps = 16/255 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ Q F +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 303 HVKIPAGKRCGFVQF 317
+++ K FV+F
Sbjct: 242 EIRVFPDKGYSFVRF 256
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 136 NGTQMPSTEQNFRLNWAT---------YGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWAT Y + ++ Q + T++ G + + +
Sbjct: 168 GGQWLGGRQ--IRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGL 225
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 226 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNG 271
>gi|297687493|ref|XP_002821247.1| PREDICTED: nucleolysin TIAR isoform 2 [Pongo abelii]
gi|410976207|ref|XP_003994514.1| PREDICTED: nucleolysin TIAR isoform 2 [Felis catus]
Length = 393
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 128/261 (49%), Gaps = 19/261 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIR----NKQTNFSEG-----------YG 118
R+L++G+L + E I +F G S K+I +++ N S G Y
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYC 68
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADV 178
F+EF H A L NG ++ E ++NWAT + +++ F +FVGDL+ ++
Sbjct: 69 FVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKILPVNHFHVFVGDLSPEI 126
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T ++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G R
Sbjct: 127 TTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 185
Query: 239 MRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+R A K A + T Q + ++ P N T++ GG+ +TD +++ F
Sbjct: 186 IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSP 245
Query: 298 YGELVHVKIPAGKRCGFVQFA 318
+G+++ +++ K FV+F+
Sbjct: 246 FGQIMEIRVFPEKGYSFVRFS 266
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 117 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 176
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDG---------------PDFTIFVGDLAADV 178
G + + R NWAT A + Q++ + T++ G +A+ +
Sbjct: 177 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 234
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 235 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 280
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 40/182 (21%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTD----RTTGRSKG------ 210
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ R S G
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEQPDSRRVNSSVGFSVLQH 61
Query: 211 -----YGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQG 265
Y FV F + + ++ MNG + G++ K + T
Sbjct: 62 TSNDPYCFVEFYEHRDAAAALAAMNG----------------RKILGKEV-KVNWATTPS 104
Query: 266 SQGENDP-NNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFA 318
SQ + P N+ +FVG L P +T + +K+ F +G++ ++ K GFV F
Sbjct: 105 SQKKILPVNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 164
Query: 319 NR 320
N+
Sbjct: 165 NK 166
>gi|392575524|gb|EIW68657.1| hypothetical protein TREMEDRAFT_71869 [Tremella mesenterica DSM
1558]
Length = 389
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 138/304 (45%), Gaps = 60/304 (19%)
Query: 59 TQPY---GVAPDASSDGIRS--LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF 113
TQPY G+ P ++ + L++G+L P + + + IF G V+ K+I+++ NF
Sbjct: 4 TQPYSTFGLTPGNHAEAPKKPHLYVGNLSPRVTDYMLTEIFAVAGPVVNAKIIQDR--NF 61
Query: 114 SEG---YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIF 170
YGF+E++ +AE+ +QT NG ++ E + ++D +F
Sbjct: 62 QHAGFNYGFVEYIDMRSAEQAIQTLNGRKIFDAE-----------VKQNKEDTQHHHHVF 110
Query: 171 VGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMN 230
VGDL+ +V D VL + F A + S+ A+V+ D +G+S+GYGF+ F + +++ MN
Sbjct: 111 VGDLSPEVNDDVLAKAFGA-FGSMSEARVMWDMNSGKSRGYGFLSFRKREDAEQAINTMN 169
Query: 231 GVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEND------------------- 271
G +R +R+ A +K TG ++ T S G
Sbjct: 170 GEWLGSRAIRVN-WANQKTQTGSSGAYSSPSYTAPSYGHYPQLTSSPTPAAPIAPLAPVI 228
Query: 272 ------------------PNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
P+N T+FVG L P VT L +F YG + +++ A +
Sbjct: 229 PGVPPAGGVPAASATPVIPDNCTLFVGNLGPYVTQAELTPLFQTYGYVTDIRMQADRGYA 288
Query: 314 FVQF 317
FV+
Sbjct: 289 FVKL 292
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 73/159 (45%), Gaps = 33/159 (20%)
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSK-GYGFVRFGDESEQLRSMT 227
++VG+L+ VTDY+L E F AV V AK++ DR + YGFV + D +++
Sbjct: 26 LYVGNLSPRVTDYMLTEIF-AVAGPVVNAKIIQDRNFQHAGFNYGFVEYIDMRSAEQAIQ 84
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG +I A K QN + +Q + +FVG L P V
Sbjct: 85 TLNG-------RKIFDAEVK-------------QNKEDTQHHHH-----VFVGDLSPEVN 119
Query: 288 DDILKTVFGQYGELVHVKI----PAGKR--CGFVQFANR 320
DD+L FG +G + ++ +GK GF+ F R
Sbjct: 120 DDVLAKAFGAFGSMSEARVMWDMNSGKSRGYGFLSFRKR 158
>gi|126649325|ref|XP_001388334.1| poly(a)-binding protein fabm [Cryptosporidium parvum Iowa II]
gi|32398879|emb|CAD98589.1| putative poly(a)-binding protein fabm, possible [Cryptosporidium
parvum]
gi|126117428|gb|EAZ51528.1| poly(a)-binding protein fabm, putative [Cryptosporidium parvum Iowa
II]
Length = 746
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 121/248 (48%), Gaps = 26/248 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL + E+ + IF S ++ R+ T S GY ++ + S A AER L T
Sbjct: 13 SLYVGDLDADVTETMLYEIFNSVAVVSSVRICRDALTRRSLGYAYVNYNSVADAERALDT 72
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T + + R+ W RR +DG +FV +L + + L +TF +++ ++
Sbjct: 73 LNFTCIRG--RPCRIMWCLRDPASRRNNDG---NVFVKNLDKSIDNKTLFDTF-SLFGNI 126
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
K+ TD G+S GYGF+ F +++ +NG + RP+ +G +
Sbjct: 127 MSCKIATD-VEGKSLGYGFIHFEHADSAKEAISRLNGAVLGDRPIYVG-----------K 174
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA---GKR 311
+QK + + E D T ++V + S T+D+L +FG YG++ + + + G+
Sbjct: 175 FQKKAERFS-----EKDKTFTNVYVKHIPKSWTEDLLYKIFGVYGKISSLVLQSDSKGRP 229
Query: 312 CGFVQFAN 319
GFV F N
Sbjct: 230 FGFVNFEN 237
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++V +LA + + L+ F + +V + TD + G S+G+GFV F E +++T
Sbjct: 364 NLYVKNLADSINEEDLRSMFEP-FGTVSSVSIKTDES-GVSRGFGFVSFLSPDEATKAIT 421
Query: 228 EMNGVLCSTRPMRIG 242
EM+ L +P+ +G
Sbjct: 422 EMHLKLVRGKPLYVG 436
>gi|322795213|gb|EFZ18035.1| hypothetical protein SINV_11488 [Solenopsis invicta]
Length = 455
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 118/247 (47%), Gaps = 13/247 (5%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E + ++F G K+IR ++ Y F+EF +H A L
Sbjct: 80 RTLYVGNLDTTVSEDLLCALFSQIGAVKGCKIIREPG---NDPYAFVEFTNHQCAATALA 136
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N E+ ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 137 AMNKRSF--LEKEMKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAF-APFGE 193
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ ++V D T +SKGY FV F +SE ++ MNG +R +R +T+K +
Sbjct: 194 ISNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRTN-WSTRKPPPPR 252
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
+ N++ + E ++ GG +TD+++K F +G + +++ K
Sbjct: 253 SERPRHSNNSKPNYEE------VLYCGGFTNGITDELIKKTFSPFGTIQDIRVFKDKGYA 306
Query: 314 FVQFANR 320
F++F +
Sbjct: 307 FIKFTTK 313
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 30/208 (14%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + F GE + +++R+ QT S+GY F+ F
Sbjct: 157 GNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 216
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT-------YGAGERRQDDGPDF--TIFVGD 173
V + AE + NG + S ++ R NW+T + P++ ++ G
Sbjct: 217 VKKSEAEAAINAMNGQWLGS--RSIRTNWSTRKPPPPRSERPRHSNNSKPNYEEVLYCGG 274
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM-----TE 228
+TD ++++TF + + +++ +V D KGY F++F + ++ TE
Sbjct: 275 FTNGITDELIKKTF-SPFGTIQDIRVFKD------KGYAFIKFTTKEAATHAIESTHNTE 327
Query: 229 MNG--VLC-----STRPMRIGPAATKKA 249
+NG V C + P +GP A +A
Sbjct: 328 INGSIVKCFWGKENGDPNSVGPNANHQA 355
>gi|426253188|ref|XP_004020282.1| PREDICTED: nucleolysin TIAR isoform 3 [Ovis aries]
Length = 385
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 125/256 (48%), Gaps = 16/256 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I +N + Y F+EF H A L
Sbjct: 8 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALA 65
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGP----------DFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ F +FVGDL+ ++T +
Sbjct: 66 AMNGRKILGKE--VKVNWATTPSSQKKDTSSKYFCCILRKSYHFHVFVGDLSPEITTEDI 123
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G R +R
Sbjct: 124 KSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNW 182
Query: 244 AATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A + T Q + ++ P N T++ GG+ +TD +++ F +G+++
Sbjct: 183 ATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIM 242
Query: 303 HVKIPAGKRCGFVQFA 318
+++ K FV+F+
Sbjct: 243 EIRVFPEKGYSFVRFS 258
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 109 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 168
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDG---------------PDFTIFVGDLAADV 178
G + + R NWAT A + Q++ + T++ G +A+ +
Sbjct: 169 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 226
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 227 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 272
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 81/169 (47%), Gaps = 21/169 (12%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ T+ + Y FV F +
Sbjct: 2 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEHTS--NDPYCFVEFYEHR 58
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAAT---KKAATGQQYQKATYQNTQGSQGENDPNNTTI 277
+ ++ MNG + +++ A T +K T +Y + + + +
Sbjct: 59 DAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSSKYFCCILRKSY---------HFHV 109
Query: 278 FVGGLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANR 320
FVG L P +T + +K+ F +G++ ++ K GFV F N+
Sbjct: 110 FVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNK 158
>gi|149036617|gb|EDL91235.1| rCG56007, isoform CRA_a [Rattus norvegicus]
Length = 386
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 130/258 (50%), Gaps = 16/258 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ Q F +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ T Q + ++ P N T++ GG+ +T+ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVSQSSPGNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 303 HVKIPAGKRCGFVQFANR 320
+++ K F++F++
Sbjct: 242 EIRVFPDKGYSFIRFSSH 259
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 136 NGTQMPSTEQNFRLNWAT---------YGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWAT Y + ++ Q + T++ G + + +
Sbjct: 168 GGQWLGGRQ--IRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPGNCTVYCGGVTSGL 225
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY F+RF ++ +NG
Sbjct: 226 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFIRFSSHESAAHAIVSVNG 271
>gi|395335144|gb|EJF67520.1| hypothetical protein DICSQDRAFT_164378 [Dichomitus squalens
LYAD-421 SS1]
Length = 395
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 124/246 (50%), Gaps = 24/246 (9%)
Query: 90 IASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERVLQTFNGTQMPSTEQN 146
+ IF G K+I ++ N+ G YGF+E++ AAE LQT NG ++ TE
Sbjct: 2 LTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYMDMRAAETALQTLNGRKIFDTE-- 57
Query: 147 FRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTG 206
R+NWA Y + ++D + +FVGDL+ +V D VL + F A + ++ A+V+ D +G
Sbjct: 58 IRVNWA-YQGQQNKEDTSNHYHVFVGDLSPEVNDDVLAKAFSA-FGTLSDARVMWDMNSG 115
Query: 207 RSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA--------TGQQYQKA 258
+S+GYGF+ F D+++ +++ MNG +R +R+ A K TG
Sbjct: 116 KSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAPPAGPPRTGMGGGAP 175
Query: 259 TYQNTQG------SQGENDPN-NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKR 311
N QG S + P NTT++VG L P T L +F G L +++ A +
Sbjct: 176 APMNFQGGPLSYESVVQQTPAYNTTVYVGNLVPYATQADLIPLFQSIGYLSEIRMQADRG 235
Query: 312 CGFVQF 317
FV+
Sbjct: 236 FAFVKL 241
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 81/197 (41%), Gaps = 40/197 (20%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + + +A F G +V+ + + S GYGF+ F AE+ + T
Sbjct: 79 VFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATM 138
Query: 136 NGTQMPSTEQNFRLNWA---TYG---AGERRQDDG-----------------------PD 166
NG + S + R+NWA T G AG R G P
Sbjct: 139 NGEWLGS--RAIRVNWANQKTQGAPPAGPPRTGMGGGAPAPMNFQGGPLSYESVVQQTPA 196
Query: 167 F--TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLR 224
+ T++VG+L T L F+++ + ++ DR G+ FV+
Sbjct: 197 YNTTVYVGNLVPYATQADLIPLFQSI-GYLSEIRMQADR------GFAFVKLDTHEHAAM 249
Query: 225 SMTEMNGVLCSTRPMRI 241
++ ++ G + RP++
Sbjct: 250 AIVQLQGQMVHGRPIKC 266
>gi|387017380|gb|AFJ50808.1| Nucleolysin TIAR [Crotalus adamanteus]
Length = 388
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 128/261 (49%), Gaps = 20/261 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIR----NKQTNFSEG-----------YG 118
++L++G+L + E I +F G S K+I +++ N S G Y
Sbjct: 8 KTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYC 67
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADV 178
F+EF H A L NG ++ E ++NWAT + +++ D F +FVGDL+ ++
Sbjct: 68 FVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEI 124
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T ++ F A + + A+VV D TTG+SKGYGFV F ++ + ++ M G R
Sbjct: 125 TTEDIKSAF-APFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 183
Query: 239 MRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+R A K A + T Q + ++ P N T++ GG+ +TD +++ F
Sbjct: 184 IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSP 243
Query: 298 YGELVHVKIPAGKRCGFVQFA 318
+G++V + K FV+F+
Sbjct: 244 FGQIVETRAFPVKGYSFVRFS 264
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 115 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHM 174
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDG---------------PDFTIFVGDLAADV 178
G + + R NWAT A + Q++ + T++ G +A+ +
Sbjct: 175 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 232
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF ++V R KGY FVRF ++ +NG
Sbjct: 233 TDQLMRQTFSPF------GQIVETRAF-PVKGYSFVRFSTHESAAHAIVSVNG 278
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 80/181 (44%), Gaps = 39/181 (21%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTD----RTTGRSKG------ 210
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ R S G
Sbjct: 2 EDDGQPKTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEQPDSRRVNSSVGFSVLQH 60
Query: 211 -----YGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQG 265
Y FV F + + ++ MNG + G++ K + T
Sbjct: 61 TSNDPYCFVEFYEHRDAAAALAAMNG----------------RKILGKEV-KVNWATTPS 103
Query: 266 SQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFAN 319
SQ ++ N+ +FVG L P +T + +K+ F +G++ ++ K GFV F N
Sbjct: 104 SQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMTTGKSKGYGFVSFYN 163
Query: 320 R 320
+
Sbjct: 164 K 164
>gi|115486297|ref|NP_001068292.1| Os11g0620100 [Oryza sativa Japonica Group]
gi|77551976|gb|ABA94773.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113645514|dbj|BAF28655.1| Os11g0620100 [Oryza sativa Japonica Group]
gi|215767783|dbj|BAH00012.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218186124|gb|EEC68551.1| hypothetical protein OsI_36864 [Oryza sativa Indica Group]
gi|222616351|gb|EEE52483.1| hypothetical protein OsJ_34666 [Oryza sativa Japonica Group]
Length = 441
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 135/270 (50%), Gaps = 27/270 (10%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P S RS+++G++ + +S + +F G K+IR ++++F GF+++
Sbjct: 71 PGFDSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKSSF----GFVDYYDR 126
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
+A + + NG Q+ Q ++NWA A +R+D F IFVGDL +VTD L
Sbjct: 127 RSAAIAIVSLNGRQLFG--QPIKVNWAY--ASTQREDTSGHFNIFVGDLCPEVTDAALFA 182
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
A ++S A+V+ D+ TGRS+G+GFV F ++ + ++ E+NG R +R A
Sbjct: 183 F-FAGFTSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINELNGKWLGNRQVRCN-WA 240
Query: 246 TKKAATGQQYQ----KATYQNTQGSQG-----------ENDPNNTTIFVGGLDPSVTDDI 290
TK A G++ Q K + T GS EN+P TT++VG L V +
Sbjct: 241 TKGANAGEEKQNTDSKGMIELTNGSSEGGKDNANEDGPENNPQYTTVYVGNLPHDVNSND 300
Query: 291 LKTVFGQY--GELVHVKIPAGKRCGFVQFA 318
+ F G + V++ K GFV+++
Sbjct: 301 VHRFFHSLGVGSIEEVRVTRDKGFGFVRYS 330
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 37/217 (17%)
Query: 55 PSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFS 114
P + Y + G ++++GDL P + ++ + + F +V+ +++T S
Sbjct: 145 PIKVNWAYASTQREDTSGHFNIFVGDLCPEVTDAALFAFFAGFTSCSDARVMWDQKTGRS 204
Query: 115 EGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA--GERRQD---------- 162
G+GF+ F + A+ + NG + + + R NWAT GA GE +Q+
Sbjct: 205 RGFGFVSFRNQQDAQNAINELNGKWLGNRQ--VRCNWATKGANAGEEKQNTDSKGMIELT 262
Query: 163 -------------DGPD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRT 204
DGP+ T++VG+L DV + F ++ G + +
Sbjct: 263 NGSSEGGKDNANEDGPENNPQYTTVYVGNLPHDVNSNDVHRFFHSL-----GVGSIEEVR 317
Query: 205 TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
R KG+GFVR+ E ++ NG L R ++
Sbjct: 318 VTRDKGFGFVRYSTHEEAALAIQTGNGQLIGGRQIKC 354
>gi|390359470|ref|XP_782936.3| PREDICTED: nucleolysin TIAR-like [Strongylocentrotus purpuratus]
Length = 430
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 125/254 (49%), Gaps = 16/254 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTG--EFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
R+L++G+L + E + +F + S K+I + S+ Y F+EF AE
Sbjct: 25 RTLYVGNLDRRVTEELVFQLFLQIAPSKTKSCKMIADHGN--SDPYCFVEFYDSVTAEAA 82
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+ NG + ++ ++NWAT R+D +FVGDL ++ L+ F Y
Sbjct: 83 MVAMNGRTV--FDKPIKVNWATTQGS--RKDTTHHHHVFVGDLVQEMKTAELRALFDK-Y 137
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP----MRIGPAATK 247
S+ A+VV D TG+S+ YGFV F E + ++ EMNG + P +R G A K
Sbjct: 138 GSITDARVVRDPETGKSRCYGFVSFEQEEDAQCAIKEMNGAILPQYPGMKAIRTGWATRK 197
Query: 248 KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT-DDILKTVFGQYGELVHVKI 306
T + + ++ + E PNN T++VGGL + +D+L+ VFG +G + V+
Sbjct: 198 --PTSHKPPQIEAKDYERVLNETSPNNCTVYVGGLQFKFSAEDLLRKVFGPFGAIQEVRT 255
Query: 307 PAGKRCGFVQFANR 320
K FV+FAN
Sbjct: 256 FPEKAFAFVRFANH 269
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 27/164 (16%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDE 219
++D T++VG+L VT+ ++ + F + S K K++ D G S Y FV F D
Sbjct: 19 EEDAQPRTLYVGNLDRRVTEELVFQLFLQIAPSKTKSCKMIADH--GNSDPYCFVEFYDS 76
Query: 220 SEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFV 279
+M MNG +P+++ + TQGS+ ++ ++ +FV
Sbjct: 77 VTAEAAMVAMNGRTVFDKPIKV-----------------NWATTQGSR-KDTTHHHHVFV 118
Query: 280 GGLDPSVTDDILKTVFGQYGELVHVKI----PAGK-RC-GFVQF 317
G L + L+ +F +YG + ++ GK RC GFV F
Sbjct: 119 GDLVQEMKTAELRALFDKYGSITDARVVRDPETGKSRCYGFVSF 162
>gi|432906488|ref|XP_004077556.1| PREDICTED: nucleolysin TIAR-like [Oryzias latipes]
Length = 382
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 129/249 (51%), Gaps = 9/249 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I +N + Y F+EF H A L
Sbjct: 8 RTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEHTSN--DPYCFVEFFEHRDAAAALA 65
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL D++ ++ F +
Sbjct: 66 AMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLNPDISTEDVRAAFTP-FGK 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TTG+SKGYGFV F ++ + ++ M G R +R AT+K +
Sbjct: 122 ISDARVVKDLTTGKSKGYGFVSFYNKLDAENAIVHMAGQWLGGRQIRTN-WATRKPPAPK 180
Query: 254 QYQKATYQNTQGSQ--GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKR 311
Q + + + + ++ P N T++ GG+ +++ +++ F +G+++ +++ K
Sbjct: 181 SLQDSVSKQLRFEEVVTQSSPQNCTVYCGGIQSELSEHLMRQTFSPFGQIMEIRVFPEKG 240
Query: 312 CGFVQFANR 320
F++F++
Sbjct: 241 YSFIRFSSH 249
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 89/200 (44%), Gaps = 28/200 (14%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + + + F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 98 VFVGDLNPDISTEDVRAAFTPFGKISDARVVKDLTTGKSKGYGFVSFYNKLDAENAIVHM 157
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDGP---------------DFTIFVGDLAADV 178
G + + R NWAT A + QD + T++ G + +++
Sbjct: 158 AGQWLGGRQ--IRTNWATRKPPAPKSLQDSVSKQLRFEEVVTQSSPQNCTVYCGGIQSEL 215
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
+++++++TF + + + +V + KGY F+RF ++ +NG
Sbjct: 216 SEHLMRQTF-SPFGQIMEIRVFPE------KGYSFIRFSSHDSAAHAIVSVNGTSIEGHA 268
Query: 239 MRI--GPAATKKAATGQQYQ 256
++ G +T A QQ++
Sbjct: 269 VKCYWGKESTDMAKNPQQFE 288
>gi|344250807|gb|EGW06911.1| Nucleolysin TIA-1 [Cricetulus griseus]
Length = 387
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 129/255 (50%), Gaps = 16/255 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ Q F +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTYELNTKQLSYDEVVSQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIL 241
Query: 303 HVKIPAGKRCGFVQF 317
+++ K F++F
Sbjct: 242 EIRVFPDKGYSFIRF 256
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 77/173 (44%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 136 NGTQMPSTEQNFRLNWAT---------YGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWAT Y ++ Q + T++ G + + +
Sbjct: 168 GGQWLGGRQ--IRTNWATRKPPAPKSTYELNTKQLSYDEVVSQSSPSNCTVYCGGVTSGL 225
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY F+RF ++ +NG
Sbjct: 226 TEQLMRQTF-SPFGQILEIRVFPD------KGYSFIRFNSHESAAHAIVSVNG 271
>gi|255555393|ref|XP_002518733.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223542114|gb|EEF43658.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 644
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 128/250 (51%), Gaps = 27/250 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL+ + +S++ +F G+ VS +V R+ T S GYG++ + S A R L
Sbjct: 25 SLYVGDLEANVTDSHLYDLFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSSPQDAARALDM 84
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P R+ ++ R+ G IF+ +L + L +TF A + ++
Sbjct: 85 LNFT--PLNGSPIRIMYSHRDPSVRKSGSG---NIFIKNLDKGIDHKALHDTFSA-FGNI 138
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV TD ++G+SKGYGFV+F +E +++ ++NG+L + + + +GP K
Sbjct: 139 LSCKVATD-SSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGPFLRK------- 190
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL---VHVKIPAGK- 310
Q + + + NN ++V L + T++ LK FG+YG + V ++ GK
Sbjct: 191 ------QERESAIDKTRFNN--VYVKNLSETTTEEDLKKAFGEYGTITSAVVMRDGDGKT 242
Query: 311 RC-GFVQFAN 319
+C GFV F N
Sbjct: 243 KCFGFVNFEN 252
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 83/185 (44%), Gaps = 14/185 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L E + FG G S V+R+ ++ +GF+ F + A ++
Sbjct: 204 NVYVKNLSETTTEEDLKKAFGEYGTITSAVVMRDGDGK-TKCFGFVNFENADDAATAVEA 262
Query: 135 FNGTQMPSTE--------QNFRLNWATYGAGERRQDDGPDF---TIFVGDLAADVTDYVL 183
NG + E +N R N + ++ F +++ +L + D L
Sbjct: 263 LNGKKFDDKEWFVGKAQKKNERENELKVRFEQSMKEAADKFQGANLYIKNLDDSIGDDRL 322
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
++ F + + ++ KV+ D G S+G GFV F E +++ EMNG + ++P+ +
Sbjct: 323 KQLF-SPFGTITSCKVMRD-PNGISRGSGFVAFSTPEEASKALMEMNGKMVVSKPLYVAL 380
Query: 244 AATKK 248
A K+
Sbjct: 381 AQRKE 385
>gi|449471209|ref|XP_004153241.1| PREDICTED: polyadenylate-binding protein RBP45-like, partial
[Cucumis sativus]
Length = 156
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/62 (79%), Positives = 55/62 (88%)
Query: 259 TYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFA 318
+YQN QG+Q ENDPNNTTIFVG LD +VTD+ L+ VFGQYGELVHVKIP GKRCGFVQFA
Sbjct: 1 SYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGKRCGFVQFA 60
Query: 319 NR 320
+R
Sbjct: 61 DR 62
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G+L + + ++ +FG GE V K+ K+ GF++F AE L+
Sbjct: 18 TIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGKRC------GFVQFADRNCAEEALRV 71
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDD 163
NGTQ+ QN RL+W + ++ Q D
Sbjct: 72 LNGTQIGG--QNIRLSWGRSPSNKQPQAD 98
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 157 GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRF 216
G + ++D + TIFVG+L A+VTD L++ F Y + K+ K GFV+F
Sbjct: 7 GAQNENDPNNTTIFVGNLDANVTDEHLRQVF-GQYGELVHVKIPV------GKRCGFVQF 59
Query: 217 GDESEQLRSMTEMNGVLCSTRPMRI 241
D + ++ +NG + +R+
Sbjct: 60 ADRNCAEEALRVLNGTQIGGQNIRL 84
>gi|108864589|gb|ABG22554.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 403
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 135/270 (50%), Gaps = 27/270 (10%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P S RS+++G++ + +S + +F G K+IR ++++F GF+++
Sbjct: 33 PGFDSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKSSF----GFVDYYDR 88
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
+A + + NG Q+ Q ++NWA A +R+D F IFVGDL +VTD L
Sbjct: 89 RSAAIAIVSLNGRQLFG--QPIKVNWAY--ASTQREDTSGHFNIFVGDLCPEVTDAALFA 144
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
A ++S A+V+ D+ TGRS+G+GFV F ++ + ++ E+NG R +R A
Sbjct: 145 F-FAGFTSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINELNGKWLGNRQVRCN-WA 202
Query: 246 TKKAATGQQYQ----KATYQNTQGSQG-----------ENDPNNTTIFVGGLDPSVTDDI 290
TK A G++ Q K + T GS EN+P TT++VG L V +
Sbjct: 203 TKGANAGEEKQNTDSKGMIELTNGSSEGGKDNANEDGPENNPQYTTVYVGNLPHDVNSND 262
Query: 291 LKTVFGQY--GELVHVKIPAGKRCGFVQFA 318
+ F G + V++ K GFV+++
Sbjct: 263 VHRFFHSLGVGSIEEVRVTRDKGFGFVRYS 292
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 37/217 (17%)
Query: 55 PSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFS 114
P + Y + G ++++GDL P + ++ + + F +V+ +++T S
Sbjct: 107 PIKVNWAYASTQREDTSGHFNIFVGDLCPEVTDAALFAFFAGFTSCSDARVMWDQKTGRS 166
Query: 115 EGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA--GERRQD---------- 162
G+GF+ F + A+ + NG + + + R NWAT GA GE +Q+
Sbjct: 167 RGFGFVSFRNQQDAQNAINELNGKWLGNRQ--VRCNWATKGANAGEEKQNTDSKGMIELT 224
Query: 163 -------------DGPD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRT 204
DGP+ T++VG+L DV + F ++ G + +
Sbjct: 225 NGSSEGGKDNANEDGPENNPQYTTVYVGNLPHDVNSNDVHRFFHSL-----GVGSIEEVR 279
Query: 205 TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
R KG+GFVR+ E ++ NG L R ++
Sbjct: 280 VTRDKGFGFVRYSTHEEAALAIQTGNGQLIGGRQIKC 316
>gi|410929559|ref|XP_003978167.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Takifugu rubripes]
Length = 385
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 124/245 (50%), Gaps = 7/245 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +FG G S K+I + T + Y F+EF H A +
Sbjct: 7 KTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVD--TAGHDPYCFVEFYEHRHATATIA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT +++ D F +FVGDL+ ++T ++ F +
Sbjct: 65 AMNGRKILGKE--VKVNWATTPTSQKK-DTSSHFHVFVGDLSPEITTDDIKAAF-GPFGK 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ +VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 121 ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTT 180
Query: 254 QYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
T Q + ++ P+N T++ GG+ +T+ I++ F +G ++ +++ K
Sbjct: 181 NETTNTKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGHIMEIRVFPDKGY 240
Query: 313 GFVQF 317
FV+F
Sbjct: 241 SFVRF 245
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + FG G+ +V+++ T S+GYGF+ F + AE +Q
Sbjct: 97 VFVGDLSPEITTDDIKAAFGPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 136 NGTQMPSTEQNFRLNWATYGAGER-----------------RQDDGPDFTIFVGDLAADV 178
G + + R NWAT + Q + T++ G + +
Sbjct: 157 GGQWLGG--RQIRTNWATRKPAPKTTNETTNTKQLSFDEVVNQSSPSNCTVYCGGVTTGL 214
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + +V D KGY FVRF ++ +NG
Sbjct: 215 TEQIMRQTFSP-FGHIMEIRVFPD------KGYSFVRFNSHEAAAHAIVSVNG 260
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 26/165 (15%)
Query: 162 DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
DD T++VG+L+ DVT+ ++ E F + K K++ D T Y FV F +
Sbjct: 2 DDEQPKTLYVGNLSRDVTEALILELFGQI-GPCKSCKMIVD--TAGHDPYCFVEFYEHRH 58
Query: 222 QLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGG 281
++ MNG + G++ K + T SQ ++ ++ +FVG
Sbjct: 59 ATATIAAMNG----------------RKILGKEV-KVNWATTPTSQKKDTSSHFHVFVGD 101
Query: 282 LDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANR 320
L P +T D +K FG +G++ ++ K GFV F N+
Sbjct: 102 LSPEITTDDIKAAFGPFGKISDCRVVKDMATGKSKGYGFVSFFNK 146
>gi|47217530|emb|CAG02457.1| unnamed protein product [Tetraodon nigroviridis]
Length = 418
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 121/242 (50%), Gaps = 7/242 (2%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFN 136
++G+L + E I +F G S K+I + N + Y F+EF H A L N
Sbjct: 15 YVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGN--DPYCFVEFYEHRHAAASLAAMN 72
Query: 137 GTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKG 196
G ++ E ++NWAT +++ D F +FVGDL+ ++T ++ F + +
Sbjct: 73 GRKIMGKE--VKVNWATTPTSQKK-DTSNHFHVFVGDLSPEITTDDVKAAF-GPFGRISD 128
Query: 197 AKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ 256
A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A Y+
Sbjct: 129 ARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKTTYE 188
Query: 257 KATYQNT-QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFV 315
+ Q ++ P+N T++ GG+ +T+ +++ F +G ++ +++ K FV
Sbjct: 189 SNSKQLCFDDVVNQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGPIMEIRVFPDKGYSFV 248
Query: 316 QF 317
+F
Sbjct: 249 RF 250
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + + + FG G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 102 VFVGDLSPEITTDDVKAAFGPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 161
Query: 136 NGTQMPSTEQNFRLNWA---------TYGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWA TY + ++ Q + T++ G ++ +
Sbjct: 162 GGQWLGG--RQIRTNWATRKPPAPKTTYESNSKQLCFDDVVNQSSPSNCTVYCGGVSTGL 219
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + +V D KGY FVRF ++ +NG
Sbjct: 220 TEQLMRQTFSP-FGPIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNG 265
>gi|402218978|gb|EJT99053.1| hypothetical protein DACRYDRAFT_24132 [Dacryopinax sp. DJM-731 SS1]
Length = 474
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 99/169 (58%), Gaps = 9/169 (5%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERVL 132
L++G+L P + E + IF G K+I ++ N+ G YGF+E+ +AE L
Sbjct: 14 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYTDMRSAETAL 71
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT NG ++ TE R+NWA Y + ++D + +FVGDL+ +V D VL + F A +
Sbjct: 72 QTLNGRKIFDTE--IRVNWA-YQGQQNKEDTSGHYHVFVGDLSPEVNDEVLAKAF-AAFP 127
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
++ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +R +R+
Sbjct: 128 TMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRV 176
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 23/157 (14%)
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSK-GYGFVRFGDESEQLRSMT 227
++VG+L+ VT+Y+L E F AV V+ K++ DR YGFV + D ++
Sbjct: 14 LYVGNLSPRVTEYMLTEIF-AVAGPVQHVKIIPDRNYQHGGLNYGFVEYTDMRSAETALQ 72
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG +R+ A GQQ + E+ + +FVG L P V
Sbjct: 73 TLNGRKIFDTEIRV-----NWAYQGQQNK------------EDTSGHYHVFVGDLSPEVN 115
Query: 288 DDILKTVFGQYGELVHVKI----PAGKRCGFVQFANR 320
D++L F + + ++ +GK G+ A R
Sbjct: 116 DEVLAKAFAAFPTMSDARVMWDMNSGKSRGYGFLAFR 152
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
+ G +++GDL P + + +A F +V+ + + S GYGF+ F AE
Sbjct: 99 TSGHYHVFVGDLSPEVNDEVLAKAFAAFPTMSDARVMWDMNSGKSRGYGFLAFRDKTDAE 158
Query: 130 RVLQTFNGTQMPSTEQNFRLNWA 152
+ + T NG + S + R+NWA
Sbjct: 159 QAIATMNGEWLGS--RAIRVNWA 179
>gi|125586871|gb|EAZ27535.1| hypothetical protein OsJ_11490 [Oryza sativa Japonica Group]
Length = 171
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 56/63 (88%)
Query: 258 ATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
+TYQNTQG+ ++DPNNTT+FVGGLDPSVTD++LK F YGELV+VKIP GKRCGFVQ+
Sbjct: 16 STYQNTQGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRCGFVQY 75
Query: 318 ANR 320
+NR
Sbjct: 76 SNR 78
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + + + F GE V K+ K+ GF+++ + A+AE ++
Sbjct: 34 TVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRC------GFVQYSNRASAEEAIRM 87
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDD 163
NG+Q+ Q+ RL+W ++ Q D
Sbjct: 88 LNGSQL--GGQSIRLSWGRSPGNKQPQQD 114
>gi|452819166|gb|EME26242.1| oligouridylate-binding protein, putative [Galdieria sulphuraria]
gi|452825749|gb|EME32744.1| oligouridylate-binding protein, putative [Galdieria sulphuraria]
Length = 309
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 126/262 (48%), Gaps = 22/262 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++G+L P + + IF G KV+ ++ T S G+GF++F A R ++
Sbjct: 14 SLYVGNLDPRVCTELLQEIFELIGPVKLAKVVGDRNTGRSLGFGFVDFYDRPTAIRAMEL 73
Query: 135 FNGTQMPSTEQNFRLNWATYGAGE-----RRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
+G ++ Q R++WA GAG + +D TIFVG+L DV + L + F +
Sbjct: 74 MHGRRVYG--QEIRIDWAHAGAGAAGRILQDEDLANMHTIFVGNLGPDVDEEKLMKAFSS 131
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA 249
+SSV GAK+ D TG GYGFV F ++ + +M M G + S R +RI A K A
Sbjct: 132 -FSSVAGAKISKDVETGLPAGYGFVSFREKKDADLAMQTMTGYILSGRALRIDWARGKNA 190
Query: 250 ATGQQYQKATYQ-------NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A G + + Q + DP N +++V GL + ++ F +G++
Sbjct: 191 ARGVSTFGSFSSSTVTPKPDIQTIMKQTDPLNVSVYVRGLPSDIDVAAIRESFRGFGDIE 250
Query: 303 HVKIPAGKRC-------GFVQF 317
VKIP R FV+F
Sbjct: 251 DVKIPDAARMTAQDRIYAFVKF 272
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 82/192 (42%), Gaps = 27/192 (14%)
Query: 64 VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFV 123
+ D + ++++G+L P ++E + F K+ ++ +T GYGF+ F
Sbjct: 99 ILQDEDLANMHTIFVGNLGPDVDEEKLMKAFSSFSSVAGAKISKDVETGLPAGYGFVSFR 158
Query: 124 SHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGER-----------------------R 160
A+ +QT G + + + R++WA R +
Sbjct: 159 EKKDADLAMQTMTGYIL--SGRALRIDWARGKNAARGVSTFGSFSSSTVTPKPDIQTIMK 216
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKV-VTDRTTGRSKGYGFVRFGDE 219
Q D + +++V L +D+ ++E+FR + ++ K+ R T + + Y FV+F
Sbjct: 217 QTDPLNVSVYVRGLPSDIDVAAIRESFRG-FGDIEDVKIPDAARMTAQDRIYAFVKFKSH 275
Query: 220 SEQLRSMTEMNG 231
R++ +M+G
Sbjct: 276 EVAARAIHDMHG 287
>gi|449445890|ref|XP_004140705.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 654
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 124/250 (49%), Gaps = 27/250 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL + +S + IF G+ VS +V R+ T S GYG++ + + A R L
Sbjct: 30 SLYVGDLDLNVTDSQLYDIFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARALDV 89
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ ++ R+ G IF+ +L + L +TF A + S+
Sbjct: 90 LNFT--PLNGKPIRVMYSHRDPSIRKSGAG---NIFIKNLDKAIDHKALHDTFSA-FGSI 143
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV D ++G+SKGYGFV+F +E L+++ ++NG+L + + + +GP K+ G
Sbjct: 144 LSCKVALD-SSGQSKGYGFVQFDNEESALKAIEKLNGMLLNDKQVYVGPFLRKQERDG-V 201
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGK- 310
K+ + N +FV L + T++ L F ++G L + + GK
Sbjct: 202 VDKSKFNN--------------VFVKNLSETTTEEDLNKAFSEFGTLTSIVVMRDADGKS 247
Query: 311 RC-GFVQFAN 319
RC GFV F N
Sbjct: 248 RCFGFVNFEN 257
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 14/185 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L E + F G S V+R+ S +GF+ F + A R + T
Sbjct: 209 NVFVKNLSETTTEEDLNKAFSEFGTLTSIVVMRDADGK-SRCFGFVNFENADDAARAVDT 267
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG + +E+ L + D +++ +L + D L
Sbjct: 268 LNGKLVDDKEWYVGKAQKKSEREVELKHRFEQTMKEAADKYQGANLYIKNLDDSIGDDKL 327
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+E F A + ++ KV+ D G S+G GFV F E R++ EMNG + ++P+ +
Sbjct: 328 KELF-APFGTITSCKVMRD-PNGISRGSGFVAFSTPDEASRALVEMNGKMVVSKPLYVAL 385
Query: 244 AATKK 248
A K+
Sbjct: 386 AQRKE 390
>gi|148807187|gb|ABR13303.1| putative oligouridylate-binding protein [Prunus dulcis]
Length = 233
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 97 TGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA 156
TG K+IR +++ YGF+++ +A + T NG + Q ++NWA A
Sbjct: 5 TGPLEGCKLIRKDKSS----YGFVDYFDRRSAAYAIVTLNGRHLFG--QPIKVNWAY--A 56
Query: 157 GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRF 216
+R+D F IFVGDL+ +VTD L F +VYSS A+V+ D+ TGRS+G+GFV F
Sbjct: 57 SSQREDTSGHFNIFVGDLSPEVTDATLFACF-SVYSSCSDARVMWDQKTGRSRGFGFVSF 115
Query: 217 GDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQG---- 268
+ + ++ ++NG +R +R ATK A + Q K+ + T G+
Sbjct: 116 RSQQDAQSAINDLNGKWLGSRQIRCN-WATKGATSNDDKQSSDSKSVVELTNGTSEDGQE 174
Query: 269 -------ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGE--LVHVKIPAGKRCGFVQFA 318
EN+P TT++VG L P VT L F G + V++ K GFV+F+
Sbjct: 175 KPNEDAPENNPQYTTVYVGNLAPEVTSVDLHRHFHSLGAGTIEDVRVQRDKGFGFVRFS 233
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 37/192 (19%)
Query: 55 PSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFS 114
P + Y + + G ++++GDL P + ++ + + F +V+ +++T S
Sbjct: 48 PIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYSSCSDARVMWDQKTGRS 107
Query: 115 EGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAG----------------- 157
G+GF+ F S A+ + NG + S + R NWAT GA
Sbjct: 108 RGFGFVSFRSQQDAQSAINDLNGKWLGS--RQIRCNWATKGATSNDDKQSSDSKSVVELT 165
Query: 158 --------ERRQDDGPD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRT 204
E+ +D P+ T++VG+LA +VT L F ++ GA + D
Sbjct: 166 NGTSEDGQEKPNEDAPENNPQYTTVYVGNLAPEVTSVDLHRHFHSL-----GAGTIEDVR 220
Query: 205 TGRSKGYGFVRF 216
R KG+GFVRF
Sbjct: 221 VQRDKGFGFVRF 232
>gi|395742091|ref|XP_003777693.1| PREDICTED: nucleolysin TIAR [Pongo abelii]
Length = 386
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 125/256 (48%), Gaps = 16/256 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I +N + Y F+EF H A L
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALA 66
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ F +FVGDL+ ++T +
Sbjct: 67 AMNGRKILGKE--VKVNWATTPSSQKKILPVSTPVPNALISDHFHVFVGDLSPEITTEDI 124
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G R +R
Sbjct: 125 KSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNW 183
Query: 244 AATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A + T Q + ++ P N T++ GG+ +TD +++ F +G+++
Sbjct: 184 ATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIM 243
Query: 303 HVKIPAGKRCGFVQFA 318
+++ K FV+F+
Sbjct: 244 EIRVFPEKGYSFVRFS 259
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 26/184 (14%)
Query: 65 APDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVS 124
P+A +++GDL P + I S F G+ +V+++ T S+GYGF+ F +
Sbjct: 99 VPNALISDHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYN 158
Query: 125 HAAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDG---------------PDF 167
AE + G + + R NWAT A + Q++ +
Sbjct: 159 KLDAENAIVHMGGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNC 216
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T++ G +A+ +TD ++++TF + + + +V + KGY FVRF ++
Sbjct: 217 TVYCGGIASGLTDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIV 269
Query: 228 EMNG 231
+NG
Sbjct: 270 SVNG 273
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 15/166 (9%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ T+ + Y FV F +
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEHTS--NDPYCFVEFYEHR 59
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
+ ++ MNG + +++ A T + QK + ++ +FVG
Sbjct: 60 DAAAALAAMNGRKILGKEVKVNWATTPSS------QKKILPVSTPVPNALISDHFHVFVG 113
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANR 320
L P +T + +K+ F +G++ ++ K GFV F N+
Sbjct: 114 DLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNK 159
>gi|89272470|emb|CAJ83096.1| OTTXETP00000006403 [Xenopus (Silurana) tropicalis]
Length = 389
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 127/261 (48%), Gaps = 20/261 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---------------YG 118
R+L++G+L + E I +F G S K+I + + G Y
Sbjct: 8 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQTDSRRVGASVSFPVLPNTNNDPYC 67
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADV 178
F+EF H A L NG ++ E ++NWAT + +++ D F +FVGDL+ ++
Sbjct: 68 FVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEI 124
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T ++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G R
Sbjct: 125 TTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 183
Query: 239 MRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+R A K A + T Q + ++ P N T++ GG+ +T+ +++ FG
Sbjct: 184 IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIGSGLTEQLMRQTFGV 243
Query: 298 YGELVHVKIPAGKRCGFVQFA 318
+G+++ +++ K F++F+
Sbjct: 244 FGQILEIRVFPEKGYSFIRFS 264
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 39/181 (21%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKG---------- 210
+DDG T++VG+L+ DVT+ ++ + F + K K++T++T R G
Sbjct: 2 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEQTDSRRVGASVSFPVLPN 60
Query: 211 -----YGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQG 265
Y FV F + + ++ MNG + G++ K + T
Sbjct: 61 TNNDPYCFVEFYEHRDAAAALAAMNG----------------RKILGKEV-KVNWATTPS 103
Query: 266 SQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFAN 319
SQ ++ N+ +FVG L P +T + +K+ F +G++ ++ K GFV F N
Sbjct: 104 SQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYN 163
Query: 320 R 320
+
Sbjct: 164 K 164
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 115 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 174
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDG---------------PDFTIFVGDLAADV 178
G + + R NWAT A + Q++ + T++ G + + +
Sbjct: 175 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIGSGL 232
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF V+ + +V + KGY F+RF ++ +NG
Sbjct: 233 TEQLMRQTF-GVFGQILEIRVFPE------KGYSFIRFSTHDSAAHAIVSVNG 278
>gi|440297981|gb|ELP90622.1| nucleolysin TIA-1, putative [Entamoeba invadens IP1]
Length = 305
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 125/250 (50%), Gaps = 20/250 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+S+ + L ++E+ ++ IF G VS K++++K T YGFIEF+ H AE +
Sbjct: 39 KSVHVAGLHESVDETLLSRIFSIVGHVVSCKIMKDK-TGTHARYGFIEFIDHTTAEFAKE 97
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG + E ++NW + + D F +FVG L +VT+ +L + F A +
Sbjct: 98 NMNGRLVYGKE--LKVNWTH----DSQSDAKGSFKLFVGGLHTEVTNEILYQNF-AKFGR 150
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI--GPAATKKAAT 251
V A+V+ +G+S+GYGFV F + + +M MNG R +++ G A K T
Sbjct: 151 VSDARVLRYSQSGKSQGYGFVTFIRKEDAETAMQMMNGEKIQGRTVKVNWGTATQKPTET 210
Query: 252 GQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PA 308
++ + T + N ++VGG+ + ++ +FG +GE++ +KI A
Sbjct: 211 VKRGFDEISRETSNT-------NNNVYVGGIPKETEESTMRKLFGDFGEIIDLKIMRTDA 263
Query: 309 GKRCGFVQFA 318
K GFV+F
Sbjct: 264 EKAYGFVRFV 273
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 19/178 (10%)
Query: 67 DASSD--GIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVS 124
D+ SD G L++G L + + F G +V+R Q+ S+GYGF+ F+
Sbjct: 116 DSQSDAKGSFKLFVGGLHTEVTNEILYQNFAKFGRVSDARVLRYSQSGKSQGYGFVTFIR 175
Query: 125 HAAAERVLQTFNGTQMPSTEQNFRLNWAT----------YGAGE-RRQDDGPDFTIFVGD 173
AE +Q NG ++ + ++NW T G E R+ + ++VG
Sbjct: 176 KEDAETAMQMMNGEKIQG--RTVKVNWGTATQKPTETVKRGFDEISRETSNTNNNVYVGG 233
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
+ + + +++ F + + K++ T K YGFVRF +++ +NG
Sbjct: 234 IPKETEESTMRKLF-GDFGEIIDLKIM---RTDAEKAYGFVRFVSHDNATKAIMMLNG 287
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Query: 45 VGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGK 104
V W P + + +S+ ++++G + EES + +FG GE + K
Sbjct: 198 VNWGTATQKPTETVKRGFDEISRETSNTNNNVYVGGIPKETEESTMRKLFGDFGEIIDLK 257
Query: 105 VIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQM 140
++R T+ + YGF+ FVSH A + + NG Q+
Sbjct: 258 IMR---TDAEKAYGFVRFVSHDNATKAIMMLNGYQL 290
>gi|297687497|ref|XP_002821249.1| PREDICTED: nucleolysin TIAR isoform 4 [Pongo abelii]
Length = 396
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 125/258 (48%), Gaps = 16/258 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I +N + Y F+EF H A L
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALA 66
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ F +FVGDL+ ++T +
Sbjct: 67 AMNGRKILGKE--VKVNWATTPSSQKKILPVSTPVPNALISDHFHVFVGDLSPEITTEDI 124
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G R +R
Sbjct: 125 KSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNW 183
Query: 244 AATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A + T Q + ++ P N T++ GG+ +TD +++ F +G+++
Sbjct: 184 ATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIM 243
Query: 303 HVKIPAGKRCGFVQFANR 320
+++ K FV+F+
Sbjct: 244 EIRVFPEKGYSFVRFSTH 261
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 26/184 (14%)
Query: 65 APDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVS 124
P+A +++GDL P + I S F G+ +V+++ T S+GYGF+ F +
Sbjct: 99 VPNALISDHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYN 158
Query: 125 HAAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDG---------------PDF 167
AE + G + + R NWAT A + Q++ +
Sbjct: 159 KLDAENAIVHMGGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNC 216
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T++ G +A+ +TD ++++TF + + +V + KGY FVRF ++
Sbjct: 217 TVYCGGIASGLTDQLMRQTFSP-FGQIMEIRVFPE------KGYSFVRFSTHESAAHAIV 269
Query: 228 EMNG 231
+NG
Sbjct: 270 SVNG 273
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 15/166 (9%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ T+ + Y FV F +
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEHTS--NDPYCFVEFYEHR 59
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
+ ++ MNG + +++ A T + QK + ++ +FVG
Sbjct: 60 DAAAALAAMNGRKILGKEVKVNWATTPSS------QKKILPVSTPVPNALISDHFHVFVG 113
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANR 320
L P +T + +K+ F +G++ ++ K GFV F N+
Sbjct: 114 DLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNK 159
>gi|395333502|gb|EJF65879.1| polyadenylate binding protein [Dichomitus squalens LYAD-421 SS1]
Length = 664
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 119/248 (47%), Gaps = 21/248 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++G+L P + E+ + IF G S +V R+ T S GY ++ +++ A ER L+
Sbjct: 45 SLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQ 104
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + + + R+ W+ R+ G IF+ +L + + L +TF A + +V
Sbjct: 105 LNYSLIKG--RACRIMWSQRDPALRKTGQG---NIFIKNLDEQIDNKALHDTF-AAFGNV 158
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV TD GRSKGYGFV + ++ +NG+L + + + +G ++KA++ ++
Sbjct: 159 LSCKVATDE-HGRSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYVGHHISRKASSRER 217
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKR--- 311
K Q T I+V LDP VT D +F Q+G + I ++
Sbjct: 218 QSKLEEMKAQF---------TNIYVKNLDPEVTQDDFVKLFEQFGNVTSAVIQTDEQGQS 268
Query: 312 --CGFVQF 317
GFV F
Sbjct: 269 RGFGFVNF 276
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L P + + +F G V+ VI+ + S G+GF+ F +H A++ ++T
Sbjct: 230 NIYVKNLDPEVTQDDFVKLFEQFGN-VTSAVIQTDEQGQSRGFGFVNFETHEEAQKAVET 288
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
+ ++ E+ L + A + +++ +L D+ D L
Sbjct: 289 LHDSEYHGRKLFVSRAQKKAEREEELRKSYEQAKVEKMSKYQGVNLYIKNLEDDIDDERL 348
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
++ F + S+ AKV+ D G SKG+GFV F E +++ EMN + ++P+ +
Sbjct: 349 RQEFEP-FGSITSAKVMRDEK-GTSKGFGFVCFSSPDEATKAVAEMNNKMIGSKPLYVS- 405
Query: 244 AATKKAATGQQYQKATYQNTQ 264
A ++ QQ + Q Q
Sbjct: 406 LAQRREVRRQQLESQIAQRNQ 426
>gi|357164563|ref|XP_003580095.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 661
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 118/248 (47%), Gaps = 27/248 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL+ + +S + +F G+ VS +V R+ + S GY ++ F + A R L+
Sbjct: 38 SLYVGDLEASVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNFSNPMDAARALEM 97
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N +P + R+ ++ RR IF+ +L + + L +TF A + ++
Sbjct: 98 LNF--VPLNNKPIRVMYSNRDPSSRRSGSA---NIFIKNLDKTIDNKTLHDTFSA-FGAI 151
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV TD G+SKG+GFV++ E +M +NG+L + +P+ +GP +K
Sbjct: 152 LSCKVATD-DMGQSKGFGFVQYEKEEFAQSAMKSLNGMLINDKPVYVGP-FLRKQERDNS 209
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAG----K 310
+ KA + N +FV L S T + L +F +YG + + G
Sbjct: 210 FDKARFNN--------------VFVKNLSESTTKEDLVKIFSEYGNITSAVVMVGTDGKS 255
Query: 311 RC-GFVQF 317
RC GF+ F
Sbjct: 256 RCFGFINF 263
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 28/201 (13%)
Query: 67 DASSDGIR--SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVS 124
D S D R ++++ +L + + IF G S V+ S +GFI F S
Sbjct: 207 DNSFDKARFNNVFVKNLSESTTKEDLVKIFSEYGNITSAVVMVGTDGK-SRCFGFINFES 265
Query: 125 HAAAERVLQTFNGTQMPSTEQNFRLNWATYGA---GERRQDDGPDF-------------- 167
A R ++ NG ++ E W A ER D F
Sbjct: 266 PDDAVRAVEELNGKKINDKE------WYCGRAQKKSEREMDLKRRFEQSMKDAADKYQGQ 319
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++ +L ++D L+E F + + + KV+ D+ G SKG GFV F E +++T
Sbjct: 320 NLYLKNLDDGISDDQLRELF-STFGKITSCKVMRDQN-GVSKGSGFVAFSTREEASQAIT 377
Query: 228 EMNGVLCSTRPMRIGPAATKK 248
EMNG + S +P+ + A K+
Sbjct: 378 EMNGKMLSGKPLYVAFAQRKE 398
>gi|195110141|ref|XP_001999640.1| GI22960 [Drosophila mojavensis]
gi|193916234|gb|EDW15101.1| GI22960 [Drosophila mojavensis]
Length = 475
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 128/271 (47%), Gaps = 31/271 (11%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++FG G S K+IR ++ Y FIE+ ++ AA L
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFGKMGPVKSCKIIREPG---NDPYAFIEYSNYQAASTALT 63
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N ++ ++NWAT + D IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRVF--LDKEIKVNWATSPGNTPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ ++V D T +SKGY FV F ++E ++ MNG +R +R +T+K +
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQSMNGQWIGSRNIRTN-WSTRKLPPPR 179
Query: 254 QYQKA------------------TYQNTQGSQGE-----NDPNNTTIFVGGLDPSV-TDD 289
+ K+ +N Q E + P NTT++ GG P+V +D+
Sbjct: 180 ESSKSGGQGGGMGGMGGGGGAGNGIKNNQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDE 239
Query: 290 ILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
++ F Q+G + V++ K F++F +
Sbjct: 240 LMHKHFMQFGPIQDVRVFKDKGFAFIKFVTK 270
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P +++GDL P +E + F GE + +++R+ T S+GY F+ F
Sbjct: 84 GNTPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSF 143
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT 153
V A AE +Q+ NG + S +N R NW+T
Sbjct: 144 VKKAEAENAIQSMNGQWIGS--RNIRTNWST 172
>gi|328708324|ref|XP_001951465.2| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Acyrthosiphon pisum]
Length = 294
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 96/177 (54%), Gaps = 13/177 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++W+G+++P+M E +I F GE+ + K+IRN T GY F++F + V+
Sbjct: 122 NIWMGNVKPYMTERFITRAFHKMGEYPNNVKLIRNTNTGEISGYAFVDFYDSVS---VMH 178
Query: 134 TFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P+T F+LN A R +F++++G L V DY L +TF Y
Sbjct: 179 KLNGKYIPNTNPPVKFKLNHAGKSTSINR-----EFSVWLGILGPGVDDYQLYKTFACRY 233
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
S++ AKVV DR +G SKGYGF+ FG E EQ + MNG ++P+++ K
Sbjct: 234 PSIRTAKVVLDR-SGLSKGYGFIFFGSEEEQKHCLNNMNGFPGLGSKPIKVNRVIPK 289
>gi|195400098|ref|XP_002058655.1| GJ14540 [Drosophila virilis]
gi|194142215|gb|EDW58623.1| GJ14540 [Drosophila virilis]
Length = 472
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 128/272 (47%), Gaps = 34/272 (12%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++FG G S K+IR ++ Y FIE+ ++ AA L
Sbjct: 7 KTLYVGNLDGSVSEDLLIALFGKMGPVKSCKIIREPG---NDPYAFIEYSNYQAASTALT 63
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N ++ ++NWAT + D IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRVF--LDKEIKVNWATSPGNTPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG--------PAA 245
+ ++V D T +SKGY FV F ++E ++ MNG +R +R P
Sbjct: 121 ISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 246 TKKAATGQ----------------QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSV-TD 288
+ K+ + Q+ T++ ++ P NTT++ GG P+V +D
Sbjct: 181 SSKSGGQGGGMGGMGGGGGAGNGIKNQRHTFEEV---YNQSSPTNTTVYCGGFPPNVISD 237
Query: 289 DILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
+++ F Q+G + V++ K F++F ++
Sbjct: 238 ELMHKHFMQFGPIQDVRVFKDKGFAFIKFVSK 269
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P +++GDL P +E + F GE + +++R+ QT S+GY F+ F
Sbjct: 84 GNTPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSF 143
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT 153
V A AE +Q NG + S ++ R NW+T
Sbjct: 144 VKKAEAENAIQAMNGQWIGS--RSIRTNWST 172
>gi|328863696|gb|EGG12795.1| hypothetical protein MELLADRAFT_73862 [Melampsora larici-populina
98AG31]
Length = 477
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 138/294 (46%), Gaps = 38/294 (12%)
Query: 54 PPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF 113
P +Q + Y P+A L++G+L P + E + IF G K+I ++ NF
Sbjct: 91 PGAQPSNSYTGHPEAKR---AHLYVGNLSPRVTEYMLQEIFSVAGSVQGVKIIPDR--NF 145
Query: 114 SEG---YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGER--RQDDGPDFT 168
G YGF+E+ +AE LQT G ++ E R+NWA + + ++D F
Sbjct: 146 QHGGLNYGFVEYYEMRSAETALQTLGGRKIFDNE--IRVNWAYQNSQQNAVKEDLSGHFH 203
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE 228
+FVGDL+ +V D VL + F A + S+ A+V+ D +G+S+GYGF+ F D+++ +++
Sbjct: 204 VFVGDLSPEVNDDVLAKAF-AAFGSLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIAT 262
Query: 229 MNGVLCSTRPMRIG---------PAATKKAATGQQYQKATYQ---------------NTQ 264
MNG +R +R+ P A A G N+
Sbjct: 263 MNGEWLGSRAIRVNWANQKNQGMPGAPGSAMGGGNMGGMNGGMNRAGGGGGGGGFGANSY 322
Query: 265 GSQGENDPN-NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
+ + P N+T++ G L P T L +F +G +V +++ A + FV+
Sbjct: 323 EAVVQQAPAYNSTVYTGNLVPYCTQADLIPLFQGFGYIVEIRMQADRGFAFVKL 376
>gi|332373790|gb|AEE62036.1| unknown [Dendroctonus ponderosae]
Length = 279
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 93/173 (53%), Gaps = 7/173 (4%)
Query: 85 MEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPST 143
M ES+I + F GE +S KV+RNK T GY F+ F + A + N +P T
Sbjct: 1 MTESFILNAFRKMGETPLSVKVMRNKFTGEPAGYCFVHFANDDDAIDAMHKLNSKPIPGT 60
Query: 144 E--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVT 201
FRLN A+ RQ +F+++VGDL+ DV DY L F + Y+++K AKV+
Sbjct: 61 NPVVRFRLNNASNNTS--RQFIDREFSVWVGDLSPDVDDYNLYRVFSSKYNTIKTAKVIL 118
Query: 202 DRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKAATGQ 253
D +G SKGYGFVRFG E E S+ MNG + T+ ++I A K G
Sbjct: 119 D-NSGFSKGYGFVRFGSEDEMRDSLITMNGYIGLGTKALKISNAVPKPKGPGD 170
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
S+W+GDL P +++ + +F + + + FS+GYGF+ F S L T
Sbjct: 85 SVWVGDLSPDVDDYNLYRVFSSKYNTIKTAKVILDNSGFSKGYGFVRFGSEDEMRDSLIT 144
Query: 135 FNG 137
NG
Sbjct: 145 MNG 147
>gi|410900506|ref|XP_003963737.1| PREDICTED: nucleolysin TIAR-like isoform 2 [Takifugu rubripes]
Length = 408
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 134/275 (48%), Gaps = 37/275 (13%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRN-----------KQTNF--------- 113
++L++G+L + E I +F G S K+I + + NF
Sbjct: 8 KTLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDVNNRDRLLEWLQLNNFYVWLCCLQH 67
Query: 114 --SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFV 171
S+ Y F+EFV H A T N ++ E ++NWAT + +++ D F +FV
Sbjct: 68 TSSDPYCFVEFVDHKDAASARATMNKRKILGKE--VKVNWATSPSCQKK-DTSNHFHVFV 124
Query: 172 GDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
GDL+ D+T ++ F A + + A+V+ D TG+SKGYGFV F ++ + ++++M G
Sbjct: 125 GDLSPDITTEDIRAAF-APFGHISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAG 183
Query: 232 VLCSTRPMRIGPAATKKAA------TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
R +R A K A G ++ K TQ S P+N T++ GG+
Sbjct: 184 QWLQGRQIRTNWATRKPPAPKSFQDNGSKHLKFDDIVTQSS-----PHNCTVYCGGIQSG 238
Query: 286 VTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
+T+ +++ F +G+++ +++ K FV+F++
Sbjct: 239 LTEHLMQQTFSPFGQIMEIRVFPDKGYSFVRFSSH 273
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 26/175 (14%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +
Sbjct: 122 VFVGDLSPDITTEDIRAAFAPFGHISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKM 181
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDGP---------------DFTIFVGDLAADV 178
G + + R NWAT A + QD+G + T++ G + + +
Sbjct: 182 AGQWLQGRQ--IRTNWATRKPPAPKSFQDNGSKHLKFDDIVTQSSPHNCTVYCGGIQSGL 239
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
T++++Q+TF + + + +V D KGY FVRF ++ +NG +
Sbjct: 240 TEHLMQQTF-SPFGQIMEIRVFPD------KGYSFVRFSSHDSAAHAIVSVNGTV 287
>gi|254572874|ref|XP_002493546.1| RNA binding protein, component of the U1 snRNP protein
[Komagataella pastoris GS115]
gi|238033345|emb|CAY71367.1| RNA binding protein, component of the U1 snRNP protein
[Komagataella pastoris GS115]
gi|328354629|emb|CCA41026.1| Protein NAM8 [Komagataella pastoris CBS 7435]
Length = 378
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 134/297 (45%), Gaps = 57/297 (19%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGK-----VIRNKQTNFSE-----GYGFIEFVSH 125
+W+GDL P EE I I+ +S K VI++K N ++ GY F+ F +
Sbjct: 22 VWMGDLLPSWEEDTIRQIWLSVDPSLSEKIHSIRVIKDKTPNLAKLNNNPGYCFLRFTDY 81
Query: 126 AAAERVLQTFNGTQMPS-TEQNFRLNWAT---------------YGAGERRQDDGPDFTI 169
A ++ + G +P+ ++ F+LNWA+ + R Q++ +I
Sbjct: 82 DTANELITNYQGKPIPNHKDKFFKLNWASSHTQNQQQQQGYQNTQDSSNRTQEN----SI 137
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
FVGDLA VTD +L + F+ Y S A+++ D TG+++G+GFV+F D E +++ EM
Sbjct: 138 FVGDLAQGVTDTMLLDAFKKNYPSAFSARIMIDSQTGKTRGFGFVKFRDIQELNKALIEM 197
Query: 230 NGVLCSTRPMRIGPAATKKAATG--------QQYQKATYQNTQGSQG------------- 268
G + + RP+R+ A + T QQ A + S G
Sbjct: 198 QGFVLNGRPIRVSTAGRSTSNTNGGQLKQSVQQSSTAPSSSGSQSYGFGNRLVIPPLPLA 257
Query: 269 -----ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
+DPNNT + V +D L F +G++V K K V +A+R
Sbjct: 258 PPLNPASDPNNTALSVTNIDELTEQKELWEYFQPFGKIVLFK-QTSKESAIVVYADR 313
>gi|47228429|emb|CAG05249.1| unnamed protein product [Tetraodon nigroviridis]
Length = 411
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 121/242 (50%), Gaps = 7/242 (2%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFN 136
++G+L + E+ I +FG G S K+I + T + Y F+EF H A + N
Sbjct: 1 YVGNLSRDVTEALILELFGQIGPCKSCKMIVD--TAGHDPYCFVEFYEHRHATATIAAMN 58
Query: 137 GTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKG 196
G ++ E ++NWAT +++ D F +FVGDL+ ++T ++ F + +
Sbjct: 59 GRKILGKE--VKVNWATTPTSQKK-DTSSHFHVFVGDLSPEITTDDIKAAF-GPFGKISD 114
Query: 197 AKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ 256
+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 115 CRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTTNET 174
Query: 257 KATYQNT-QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFV 315
T Q + ++ P+N T++ GG+ +T+ I++ F +G ++ +++ K FV
Sbjct: 175 TNTKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGHIMEIRVFPDKGYSFV 234
Query: 316 QF 317
+F
Sbjct: 235 RF 236
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + FG G+ +V+++ T S+GYGF+ F + AE +Q
Sbjct: 88 VFVGDLSPEITTDDIKAAFGPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 147
Query: 136 NGTQMPSTEQNFRLNWATYGAGER-----------------RQDDGPDFTIFVGDLAADV 178
G + + R NWAT + Q + T++ G + +
Sbjct: 148 GGQWLGG--RQIRTNWATRKPAPKTTNETTNTKQLSFDEVVNQSSPSNCTVYCGGVTTGL 205
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 206 TEQIMRQTF-SPFGHIMEIRVFPD------KGYSFVRFNSHEAAAHAIVSVNG 251
>gi|7528270|gb|AAF63202.1|AF240679_1 poly(A)-binding protein [Cucumis sativus]
Length = 649
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 134/275 (48%), Gaps = 31/275 (11%)
Query: 54 PPSQQTQPYGVAPDASSDG----IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNK 109
PP Q G P A+ SL++GDL + +S + +F G+ VS +V R+
Sbjct: 5 PPQPQVPNSGADPAANGGANQHVTTSLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDL 64
Query: 110 QTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTI 169
+ S GYG++ + + A R L N T P R+ ++ R+ G I
Sbjct: 65 TSRRSLGYGYVNYSNPVDASRALDVLNFT--PLNGNPIRVMYSHRDPSVRKSGSG---NI 119
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
F+ +L + L +TF A + S+ KV TD ++G+SKG+GFV+F E L+++ ++
Sbjct: 120 FIKNLDKAIDHKALHDTFSA-FGSILSCKVATD-SSGQSKGFGFVQFDTEEAALKAIEKL 177
Query: 230 NGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDD 289
NG+L + + + +GP K Q +++ + T+ NN +FV L + +++
Sbjct: 178 NGMLLNDKQVFVGPFLRK------QERESVSEKTKF-------NN--VFVKNLAETTSEE 222
Query: 290 ILKTVFGQYGELVHVKI----PAGKRC-GFVQFAN 319
LK +FG++G + V + +C GFV F N
Sbjct: 223 DLKNMFGEFGPITSVVVMRDGEGKSKCFGFVNFEN 257
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 85/185 (45%), Gaps = 14/185 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L E + ++FG G S V+R+ + S+ +GF+ F + A R ++
Sbjct: 209 NVFVKNLAETTSEEDLKNMFGEFGPITSVVVMRDGEGK-SKCFGFVNFENADDAARSVEA 267
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG ++ +E+ L + + D ++V +L + D L
Sbjct: 268 LNGKKVDGKEWYVGKAQKKSEREVELKSRFEQSVKEAADKYQGANLYVKNLDDSIDDDKL 327
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+E F + ++ KV+ D G S+G GFV F E R++ EMNG + ++P+ +
Sbjct: 328 KELFTG-FGTITSCKVMRD-PNGISRGSGFVAFSSPEEAARALAEMNGRMIVSKPLYVAL 385
Query: 244 AATKK 248
A K+
Sbjct: 386 AQRKE 390
>gi|209881749|ref|XP_002142312.1| polyadenylate-binding protein [Cryptosporidium muris RN66]
gi|209557918|gb|EEA07963.1| polyadenylate-binding protein, putative [Cryptosporidium muris
RN66]
Length = 723
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 118/246 (47%), Gaps = 26/246 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + E+ + IF S ++ R+ T S GY ++ + S A AER L T
Sbjct: 13 SLYVGDLDPDVTETMLYEIFNSVAVVSSVRICRDALTRRSLGYAYVNYNSVADAERALDT 72
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T + S + R+ W RR ++G +FV +L + + L +TF +++ ++
Sbjct: 73 LNFTCIRS--RPCRIMWCLRDPASRRNNEG---NVFVKNLDKSIDNKTLFDTF-SLFGNI 126
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
K+ TD + G S GYGF+ F ++ +NG++ RP+ +G
Sbjct: 127 MSCKIATD-SEGNSLGYGFIHFEHPESAKEAIARLNGMILGDRPIYVG------------ 173
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA---GKR 311
+Q E D T ++V + + +++ L T+FG YG++ + + + G+
Sbjct: 174 ----KFQRKAERFSEKDKTFTNVYVKHIPKTWSEETLHTLFGVYGKISSLVLQSDSKGRP 229
Query: 312 CGFVQF 317
GFV F
Sbjct: 230 FGFVNF 235
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++V +L+ +T+ L+ F Y ++ + TD + G S+G+GFV F E +++T
Sbjct: 361 NLYVKNLSESMTESDLRSLFEP-YGTISSVSIKTDES-GISRGFGFVSFLSPDEATKAIT 418
Query: 228 EMNGVLCSTRPMRIG 242
EM+ L +P+ +G
Sbjct: 419 EMHLKLVRGKPLYVG 433
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 35/183 (19%), Positives = 77/183 (42%), Gaps = 15/183 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L ++ + F G +S K+ + + N S GYGFI F +A+ +
Sbjct: 101 NVFVKNLDKSIDNKTLFDTFSLFGNIMSCKIATDSEGN-SLGYGFIHFEHPESAKEAIAR 159
Query: 135 FNGTQM---PSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQETFRAV 190
NG + P F+ ER + FT ++V + ++ L F V
Sbjct: 160 LNGMILGDRPIYVGKFQRK------AERFSEKDKTFTNVYVKHIPKTWSEETLHTLF-GV 212
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y + + +D + + +GFV F D +++ ++ L + + + +++
Sbjct: 213 YGKISSLVLQSD---SKGRPFGFVNFEDPESAKKAVANLHNALVTPLGVELNSNNSERTE 269
Query: 251 TGQ 253
+G+
Sbjct: 270 SGK 272
>gi|367016893|ref|XP_003682945.1| hypothetical protein TDEL_0G03670 [Torulaspora delbrueckii]
gi|359750608|emb|CCE93734.1| hypothetical protein TDEL_0G03670 [Torulaspora delbrueckii]
Length = 617
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 83/148 (56%), Gaps = 12/148 (8%)
Query: 116 GYGFIEFVSHAAAERVLQTFNG---------TQMP---STEQNFRLNWATYGAGERRQDD 163
GY F+EF S A+ L +G T +P S ++NFRLNWA+ +
Sbjct: 140 GYCFVEFESQQDAQFALSLNSGPLPNIISRSTNLPTNPSGQRNFRLNWASGATLQSSIPS 199
Query: 164 GPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQL 223
P+F++FVGDL+ T+ L F+ + SVK +V+TD TG S+ +GFVRFG+E E+
Sbjct: 200 RPEFSLFVGDLSPTATEADLLSLFQQKFRSVKTVRVMTDPITGASRCFGFVRFGNEEERR 259
Query: 224 RSMTEMNGVLCSTRPMRIGPAATKKAAT 251
R++ EMNGV C R +R+ A + T
Sbjct: 260 RALVEMNGVWCQGRCLRVAYATPRNNMT 287
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 272 PNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
PNNTT+F+GGL P + + L+ +F +G ++ VKIP GK CGFV++ NR
Sbjct: 383 PNNTTVFIGGLTPKINEAQLQALFSPFGNILTVKIPQGKNCGFVKYENR 431
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 120/312 (38%), Gaps = 74/312 (23%)
Query: 24 MAYQQQSQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQP 83
M+ Q Q QQ +PV + P+PP + SS+ R+LW+GDL P
Sbjct: 1 MSDDQIQQVQQSSGDSPV------SAIPLPP--------SATIETSSEPPRTLWMGDLDP 46
Query: 84 WMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPST 143
+E I I+ + V K+IR K+ + ++ + NGT +
Sbjct: 47 SFDEMTIQDIWQQLDKKVFVKLIRAKK----------NLLIPCSSTAATSSSNGTPNSNA 96
Query: 144 EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDR 203
+N G G D D VL+ T + ++ G +
Sbjct: 97 AENIT------GNGSSNDSDPSD---------------VLESTQKI---NINGVSFIDPA 132
Query: 204 TTG-RSKGYGFVRFGDESEQLRSMTEMNG----VLCSTRPMRIGPAATKKA----ATGQQ 254
TT GY FV F + + +++ +G ++ + + P+ + A+G
Sbjct: 133 TTPLHHAGYCFVEFESQQDAQFALSLNSGPLPNIISRSTNLPTNPSGQRNFRLNWASG-- 190
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHV------KIPA 308
AT Q++ S+ E ++FVG L P+ T+ L ++F Q V I
Sbjct: 191 ---ATLQSSIPSRPE-----FSLFVGDLSPTATEADLLSLFQQKFRSVKTVRVMTDPITG 242
Query: 309 GKRC-GFVQFAN 319
RC GFV+F N
Sbjct: 243 ASRCFGFVRFGN 254
>gi|240256156|ref|NP_195137.5| Polyadenylate-binding protein 2 [Arabidopsis thaliana]
gi|1171978|sp|P42731.1|PABP2_ARATH RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2
gi|304109|gb|AAA61780.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|2911051|emb|CAA17561.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|7270360|emb|CAB80128.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|26983870|gb|AAN86187.1| putative polyadenylate-binding protein 2 (PABP2) [Arabidopsis
thaliana]
gi|332660925|gb|AEE86325.1| Polyadenylate-binding protein 2 [Arabidopsis thaliana]
Length = 629
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 127/253 (50%), Gaps = 27/253 (10%)
Query: 72 GIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
G SL++GDL + +S + FG G V+ +V R+ T S GYG++ F + A R
Sbjct: 34 GNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARA 93
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+Q N +P + R+ ++ RR G IF+ +L + L +TF + +
Sbjct: 94 IQELN--YIPLYGKPIRVMYSHRDPSVRRSGAG---NIFIKNLDESIDHKALHDTFSS-F 147
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT 251
++ KV D ++G+SKGYGFV++ +E +++ ++NG+L + + + +GP +
Sbjct: 148 GNIVSCKVAVD-SSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRR---- 202
Query: 252 GQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL---VHVKIPA 308
Q + +T T+ T ++V L S TDD LK FG+YG++ V +K
Sbjct: 203 --QERDSTANKTK---------FTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGE 251
Query: 309 GKR--CGFVQFAN 319
GK GFV F N
Sbjct: 252 GKSKGFGFVNFEN 264
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 89/189 (47%), Gaps = 22/189 (11%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L + + + FG G+ S V+++ + S+G+GF+ F + A R +++
Sbjct: 216 NVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGK-SKGFGFVNFENADDAARAVES 274
Query: 135 FNGTQMPS---------------TEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVT 179
NG + TE R A ++ Q ++V +L ++
Sbjct: 275 LNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSS----NLYVKNLDPSIS 330
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
D L+E F + + +V +KV+ D G SKG GFV F E +M++++G + ++P+
Sbjct: 331 DEKLKEIF-SPFGTVTSSKVMRD-PNGTSKGSGFVAFATPEEATEAMSQLSGKMIESKPL 388
Query: 240 RIGPAATKK 248
+ A K+
Sbjct: 389 YVAIAQRKE 397
>gi|255538240|ref|XP_002510185.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550886|gb|EEF52372.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 658
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 129/250 (51%), Gaps = 28/250 (11%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL + +S + +F G+ VS +V R+ T S GYG++ + S A R L
Sbjct: 38 SLYVGDLDLNVTDSQLYDVFNQVGQVVSVRVCRDLTTRRSLGYGYVNYTSPQDAARALDI 97
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ ++ R+ G IF+ +L + L +TF + + ++
Sbjct: 98 LNFT--PFNNKPIRIMYSHRDPSIRKSGTG---NIFIKNLDKTIDHKALHDTFSS-FGNI 151
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV TD ++G+S+GYGFV+F +E ++ ++NG+L + + + +G
Sbjct: 152 LSCKVATD-SSGQSRGYGFVQFDNEEAAQNAIDKLNGMLLNDKQVYVG-----------H 199
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL---VHVKIPAGK- 310
+ + +++ ++ N+ ++V L S T++ LK +FG+YGE+ V ++ GK
Sbjct: 200 FLRKHERDSASNKKFNN-----VYVKNLSESTTEEDLKNIFGEYGEITSAVIMRDADGKS 254
Query: 311 RC-GFVQFAN 319
+C GFV F N
Sbjct: 255 KCFGFVNFEN 264
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 92/192 (47%), Gaps = 14/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
AS+ ++++ +L E + +IFG GE S ++R+ S+ +GF+ F + A
Sbjct: 209 ASNKKFNNVYVKNLSESTTEEDLKNIFGEYGEITSAVIMRDADGK-SKCFGFVNFENTDA 267
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A + +++ NG ++ +E+ L + + D +++ +L
Sbjct: 268 AAKAVESLNGKKIDDKEWYVGKAQKKSERELELKSQFEQSMKEAVDKYQGVNLYIKNLDD 327
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
++D L+E F + + + KV+ D +G S+G GFV F E R++ EMNG + +
Sbjct: 328 SISDENLKELF-SDFGMITSCKVMRD-PSGISRGSGFVAFSTPEEASRALAEMNGKMVVS 385
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 386 KPLYVALAQRKE 397
>gi|326924063|ref|XP_003208252.1| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIAR-like [Meleagris
gallopavo]
Length = 382
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 121/243 (49%), Gaps = 7/243 (2%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFN 136
++G+L + E I +F G S K+I +N + Y F+EF H A L N
Sbjct: 22 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALAAMN 79
Query: 137 GTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKG 196
G ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A + +
Sbjct: 80 GRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAF-APFGKISD 135
Query: 197 AKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ 256
A+VV D TG+SKGYGFV F ++ + ++ M G R +R A +
Sbjct: 136 ARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRXXXXXXXXPAPKSTQE 195
Query: 257 KATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFV 315
T Q + ++ P N T++ GG+ +TD +++ F +G+++ +++ K FV
Sbjct: 196 NNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFV 255
Query: 316 QFA 318
+F+
Sbjct: 256 RFS 258
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 74/171 (43%), Gaps = 22/171 (12%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 109 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 168
Query: 136 NGTQMPSTEQNFRLNWATYGAGERRQDDG---------------PDFTIFVGDLAADVTD 180
G + + A + Q++ + T++ G +A+ +TD
Sbjct: 169 GGQWLGGRQIRXXXXXXXXPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTD 228
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 229 QLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 272
>gi|242076392|ref|XP_002448132.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
gi|241939315|gb|EES12460.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
Length = 664
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 118/250 (47%), Gaps = 27/250 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL+ + +S + +F G+ VS +V R+ + S GY ++ F + A R L+
Sbjct: 47 SLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNFSNPLDAARALEV 106
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + + R+ ++ RR IF+ +L + + L ETF + + ++
Sbjct: 107 LNFAVL--NNKPIRVMYSNRDPSSRRSGSA---NIFIKNLDKTIDNKTLHETFSS-FGTI 160
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV D G+SKG+GFV++ E ++ +NG+L + +P+ +GP +K
Sbjct: 161 LSCKVAMDE-AGQSKGFGFVQYEKEEAAQNAIKSLNGMLINDKPVFVGP-FLRKQERDHS 218
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL----VHVKIPAGK 310
+ K + N +FV L S T + L VFG+YG + V + +
Sbjct: 219 FDKTKFNN--------------VFVKNLSESTTKEDLLKVFGEYGSITSAVVMIGMDGKS 264
Query: 311 RC-GFVQFAN 319
RC GF+ F N
Sbjct: 265 RCFGFINFEN 274
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 14/185 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L + + +FG G S V+ S +GFI F + AA R +Q
Sbjct: 226 NVFVKNLSESTTKEDLLKVFGEYGSITSAVVMIGMDGK-SRCFGFINFENPDAASRAVQE 284
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG ++ +E+ L + + D +++ +L + D L
Sbjct: 285 LNGKKINDKEWYVGRAQKKSEREMELKRRFEQSLKDAADKYQGLNLYLKNLDDSIGDDQL 344
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+E F + + + KV+ D+ G SKG GFV F E +++TEMNG + S +P+ +
Sbjct: 345 RELF-SNFGKITSYKVMRDQN-GLSKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAF 402
Query: 244 AATKK 248
A K+
Sbjct: 403 AQRKE 407
>gi|449438385|ref|XP_004136969.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
gi|449495630|ref|XP_004159899.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 649
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 134/275 (48%), Gaps = 31/275 (11%)
Query: 54 PPSQQTQPYGVAPDASSDG----IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNK 109
PP Q G P A+ SL++GDL + +S + +F G+ VS +V R+
Sbjct: 5 PPQPQVPNSGADPAANGGANQHVTTSLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDL 64
Query: 110 QTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTI 169
+ S GYG++ + + A R L N T P R+ ++ R+ G I
Sbjct: 65 TSRRSLGYGYVNYSNPVDASRALDVLNFT--PLNGNPIRVMYSHRDPSVRKSGSG---NI 119
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
F+ +L + L +TF A + S+ KV TD ++G+SKG+GFV+F E L+++ ++
Sbjct: 120 FIKNLDKAIDHKALHDTFSA-FGSILSCKVATD-SSGQSKGFGFVQFDTEEAALKAIEKL 177
Query: 230 NGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDD 289
NG+L + + + +GP K Q +++ + T+ NN +FV L + +++
Sbjct: 178 NGMLLNDKQVFVGPFLRK------QERESVSEKTKF-------NN--VFVKNLAETTSEE 222
Query: 290 ILKTVFGQYGELVHVKI----PAGKRC-GFVQFAN 319
LK +FG++G + V + +C GFV F N
Sbjct: 223 DLKNMFGEFGPITSVVVMRDGEGKSKCFGFVNFEN 257
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 85/185 (45%), Gaps = 14/185 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L E + ++FG G S V+R+ + S+ +GF+ F + A R ++
Sbjct: 209 NVFVKNLAETTSEEDLKNMFGEFGPITSVVVMRDGEGK-SKCFGFVNFENADDAARSVEA 267
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG ++ +E+ L + + D ++V +L + D L
Sbjct: 268 LNGKKVDGKEWYVGKAQKKSEREVELKSRFEQSVKEAADKYQGANLYVKNLDDSIDDDKL 327
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+E F + ++ KV+ D G S+G GFV F E R++ EMNG + ++P+ +
Sbjct: 328 KELFTG-FGTITSCKVMRD-PNGISRGSGFVAFSSPEEAARALAEMNGRMIVSKPLYVAL 385
Query: 244 AATKK 248
A K+
Sbjct: 386 AQRKE 390
>gi|19347816|gb|AAL86321.1| putative poly(A)-binding protein [Arabidopsis thaliana]
Length = 613
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 127/253 (50%), Gaps = 27/253 (10%)
Query: 72 GIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
G SL++GDL + +S + FG G V+ +V R+ T S GYG++ F + A R
Sbjct: 18 GNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARA 77
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+Q N +P + R+ ++ RR G IF+ +L + L +TF + +
Sbjct: 78 IQELN--YIPLYGKPIRVMYSHRDPSVRRSGAG---NIFIKNLDESIDHKALHDTFSS-F 131
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT 251
++ KV D ++G+SKGYGFV++ +E +++ ++NG+L + + + +GP +
Sbjct: 132 GNIVSCKVAVD-SSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRR---- 186
Query: 252 GQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL---VHVKIPA 308
Q + +T T+ T ++V L S TDD LK FG+YG++ V +K
Sbjct: 187 --QERDSTANKTK---------FTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGE 235
Query: 309 GKR--CGFVQFAN 319
GK GFV F N
Sbjct: 236 GKSKGFGFVNFEN 248
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 89/189 (47%), Gaps = 22/189 (11%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L + + + FG G+ S V+++ + S+G+GF+ F + A R +++
Sbjct: 200 NVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGK-SKGFGFVNFENADDAARAVES 258
Query: 135 FNGTQMPS---------------TEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVT 179
NG + TE R A ++ Q ++V +L ++
Sbjct: 259 LNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSS----NLYVKNLDPSIS 314
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
D L+E F + + +V +KV+ D G SKG GFV F E +M++++G + ++P+
Sbjct: 315 DEKLKEIF-SPFGTVTSSKVMRD-PNGTSKGSGFVAFATPEEATEAMSQLSGKMIESKPL 372
Query: 240 RIGPAATKK 248
+ A K+
Sbjct: 373 YVAIAQRKE 381
>gi|213514260|ref|NP_001133879.1| Nucleolysin TIAR [Salmo salar]
gi|209155676|gb|ACI34070.1| Nucleolysin TIAR [Salmo salar]
Length = 408
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 128/263 (48%), Gaps = 20/263 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVI--------RNKQTNFS-------EGYG 118
++L++G+L + E I +F G S K+I N FS + Y
Sbjct: 8 KTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEQPDSRRMNSSVGFSVLQQSSNDPYC 67
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADV 178
F+EF H A L NG ++ E ++NWAT + +++ D F +FVGDL+ ++
Sbjct: 68 FVEFFEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEI 124
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T ++ F A + + A+VV D TTG+SKGYGFV F ++ + ++ M G R
Sbjct: 125 TTEDIKAAF-APFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 183
Query: 239 MRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+R A K A + Q + ++ P N T++ GG+ +++ +++ F
Sbjct: 184 IRTNWATRKPPAPKNVQDNGSKQLRFEDVVNQSSPQNCTVYCGGIQSGLSEHLMRQTFSP 243
Query: 298 YGELVHVKIPAGKRCGFVQFANR 320
+G+++ +++ K F++F++
Sbjct: 244 FGQIMEIRVFPEKGYSFIRFSSH 266
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 115 VFVGDLSPEITTEDIKAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHM 174
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDGP---------------DFTIFVGDLAADV 178
G + + R NWAT A + QD+G + T++ G + + +
Sbjct: 175 GGQWLGGRQ--IRTNWATRKPPAPKNVQDNGSKQLRFEDVVNQSSPQNCTVYCGGIQSGL 232
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
+++++++TF + + + +V + KGY F+RF ++ +NG
Sbjct: 233 SEHLMRQTF-SPFGQIMEIRVFPE------KGYSFIRFSSHESAAHAIVSVNG 278
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 77/181 (42%), Gaps = 39/181 (21%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKG---------- 210
+D+ T++VG+L+ DVT+ ++ + F + K K++T++ R
Sbjct: 2 EDESHPKTLYVGNLSRDVTEILILQLFTQI-GPCKSCKMITEQPDSRRMNSSVGFSVLQQ 60
Query: 211 -----YGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQG 265
Y FV F + + ++ MNG + G++ K + T
Sbjct: 61 SSNDPYCFVEFFEHRDAAAALAAMNG----------------RKILGKEV-KVNWATTPS 103
Query: 266 SQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFAN 319
SQ ++ N+ +FVG L P +T + +K F +G++ ++ K GFV F N
Sbjct: 104 SQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYN 163
Query: 320 R 320
+
Sbjct: 164 K 164
>gi|195037090|ref|XP_001989998.1| GH19101 [Drosophila grimshawi]
gi|193894194|gb|EDV93060.1| GH19101 [Drosophila grimshawi]
Length = 476
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 127/271 (46%), Gaps = 31/271 (11%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++FG G S K+IR ++ Y FIE+ ++ AA L
Sbjct: 7 KTLYVGNLDGTVSEELLVALFGKMGPVKSCKIIREPG---NDPYAFIEYSNYQAASTALT 63
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N ++ ++NWAT + D IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRVF--LDKEIKVNWATSPGNTPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ ++V D T +SKGY FV F ++E ++ MNG +R +R +T+K +
Sbjct: 121 ISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTN-WSTRKLPPPR 179
Query: 254 QYQKA------------------TYQNTQGSQGE-----NDPNNTTIFVGGLDPSV-TDD 289
+ K+ +N Q E + P NTT++ GG P V +D+
Sbjct: 180 ESSKSGGQGGGMGGMGGGGGAGNGIKNNQRHTFEEVYSQSSPTNTTVYCGGFQPHVISDE 239
Query: 290 ILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
++ F Q+G + V++ K F++F +
Sbjct: 240 LMHKHFMQFGPIQDVRVFKDKGFAFIKFVAK 270
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P +++GDL P +E + F GE + +++R+ QT S+GY F+ F
Sbjct: 84 GNTPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSF 143
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT 153
V A AE +Q NG + S ++ R NW+T
Sbjct: 144 VKKAEAENAIQAMNGQWIGS--RSIRTNWST 172
>gi|346972032|gb|EGY15484.1| nucleolysin TIA-1 [Verticillium dahliae VdLs.17]
Length = 489
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 109/220 (49%), Gaps = 22/220 (10%)
Query: 117 YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
YGF+E+ AAER +QT NG ++ +E R+NWA ++D F IFVGDL+
Sbjct: 138 YGFVEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSNTTSKEDTSNHFHIFVGDLSN 195
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+V D +L + F A + SV A+V+ D TGRS+GYGFV F D + ++++ M+G +
Sbjct: 196 EVNDEILSQAF-AAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGS 254
Query: 237 RPMRIGPAATK--KAATGQQYQKATYQNTQGSQGEND----------------PN-NTTI 277
R +R A K + QQ +A G + PN TT+
Sbjct: 255 RAIRCNWANQKGQPSIAQQQAMQAMGMTPTTPFGHHQFPAHGMASYEVILAQTPNWQTTV 314
Query: 278 FVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
+VG L P T + + +F +G +V + A + F++
Sbjct: 315 YVGNLTPYTTPNDVVPLFQNFGFVVESRFQADRGFAFIKM 354
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL + + ++ F G +V+ + +T S GYGF+ F AE+ L +
Sbjct: 188 IFVGDLSNEVNDEILSQAFAAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSM 247
Query: 136 NGTQMPSTEQNFRLNWAT 153
+G + S + R NWA
Sbjct: 248 DGEWLGS--RAIRCNWAN 263
>gi|71051295|gb|AAH99594.1| Trnau1ap protein [Mus musculus]
Length = 235
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 80/127 (62%), Gaps = 7/127 (5%)
Query: 126 AAAERVLQTFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
A AE+ L NG +P + + F+LN+ATYG ++ D+ P++++FVGDL DV D +L
Sbjct: 4 ATAEKCLHKINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGML 60
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIG 242
E F VY S +G KVV D TG SKGYGFV+F DE EQ R++TE G + +P+R+
Sbjct: 61 YEFFVKVYPSCRGGKVVLD-PTGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPVRLS 119
Query: 243 PAATKKA 249
A K +
Sbjct: 120 VAIPKAS 126
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 62 YGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIE 121
YG PD S + SL++GDL P +++ + F G + T S+GYGF++
Sbjct: 34 YGKQPDNSPE--YSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDPTGVSKGYGFVK 91
Query: 122 FVSHAAAERVLQTFNG 137
F +R L G
Sbjct: 92 FTDELEQKRALTECQG 107
>gi|387017378|gb|AFJ50807.1| Nucleolysin TIA-1 isoform p40 [Crotalus adamanteus]
Length = 392
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 127/255 (49%), Gaps = 16/255 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFYEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGP----------DFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ F +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVNTLRSQDHFHVFVGDLSPEITTEDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ Q + ++ P+N T++ GG+ +T+ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTYESNAKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 303 HVKIPAGKRCGFVQF 317
+++ K FV+F
Sbjct: 242 EIRVFPDKGYSFVRF 256
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 136 NGTQMPSTEQNFRLNWAT---------YGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWAT Y + ++ Q + T++ G + + +
Sbjct: 168 GGQWLGGRQ--IRTNWATRKPPAPKSTYESNAKQLSYDDVVNQSSPSNCTVYCGGVTSGL 225
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 226 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNG 271
>gi|326531842|dbj|BAK01297.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 291
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 128/263 (48%), Gaps = 26/263 (9%)
Query: 40 PVPPPVGWTPQPVPPPSQQTQPYG-VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTG 98
P+ PP P + P + G + P S RS+++G++ + +S + +F G
Sbjct: 37 PMFPPHHAHPGLLAAPHIEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDSLLHEVFQSIG 96
Query: 99 EFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGE 158
K+IR ++++F GF+++ A + + NG Q+ Q ++NWA A
Sbjct: 97 PVEGCKLIRKEKSSF----GFVDYYDRRYAALAIVSLNGRQL--FGQPIKVNWAY--AST 148
Query: 159 RRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGD 218
+R+D F IFVGDL +VTD L F A YS+ A+V+ D+ +GRS+G+GFV F +
Sbjct: 149 QREDTSGHFNIFVGDLCPEVTDAALFVFFSA-YSTCSDARVMWDQQSGRSRGFGFVSFRN 207
Query: 219 ESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ---------------KATYQNT 263
+ + ++ E+NG R +R ATK A G+ Q +A +N
Sbjct: 208 QQDAQTAINELNGKWLGNRQIRCN-WATKGANAGEVKQSTDSKGMVELISGSSEAGKENA 266
Query: 264 QGSQGENDPNNTTIFVGGLDPSV 286
E++P TT++VG L V
Sbjct: 267 NEDGPEDNPQYTTVYVGNLSHDV 289
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 29/159 (18%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ VTD +L E F+++ V+G K++ + +GFV + D ++
Sbjct: 73 SVYVGNIHLQVTDSLLHEVFQSI-GPVEGCKLIRKEKSS----FGFVDYYDRRYAALAIV 127
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG +P+++ A Y +TQ E+ + IFVG L P VT
Sbjct: 128 SLNGRQLFGQPIKVNWA---------------YASTQR---EDTSGHFNIFVGDLCPEVT 169
Query: 288 DDILKTVFGQYGELVHVKIP------AGKRCGFVQFANR 320
D L F Y ++ + GFV F N+
Sbjct: 170 DAALFVFFSAYSTCSDARVMWDQQSGRSRGFGFVSFRNQ 208
>gi|414588971|tpg|DAA39542.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 648
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 126/250 (50%), Gaps = 27/250 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL ++++ + +F G VS +V R+ + S GY ++ + + A R L+
Sbjct: 36 SLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALEL 95
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ ++ R+ G IF+ +L + + L +TF A + ++
Sbjct: 96 LNFT--PINGKPIRIMYSNRDPSSRKSGTG---NIFIKNLDKSIDNKALYDTFCA-FGNI 149
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
K+ TD +G S+GYGFV+F + ++ ++NG+L + + + +GP K Q
Sbjct: 150 LSCKIATD-PSGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGPFVRK------Q 202
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL---VHVKIPAGK- 310
++ N + S ++V L +VTDD LK +FG+YG + V ++ GK
Sbjct: 203 DRENVSSNIKFS---------NVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKS 253
Query: 311 RC-GFVQFAN 319
RC GFV F N
Sbjct: 254 RCFGFVNFEN 263
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 127/271 (46%), Gaps = 29/271 (10%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P + G +++I +L ++ + F G +S K+ + + S GYGF++F
Sbjct: 115 PSSRKSGTGNIFIKNLDKSIDNKALYDTFCAFGNILSCKIATDP-SGESRGYGFVQFEKD 173
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD-----DGPDFT-IFVGDLAADVT 179
+A+ + NG + + G R+QD F+ ++V +L+ VT
Sbjct: 174 ESAQSAIDKLNGMLINDKK-------VFVGPFVRKQDRENVSSNIKFSNVYVKNLSDTVT 226
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
D L+E F Y ++ A V+ D + G+S+ +GFV F + +++ E+NG + + + +
Sbjct: 227 DDELKEMF-GKYGTITSAVVMRD-SDGKSRCFGFVNFENADAAAQAVQELNGKIFNDKEL 284
Query: 240 RIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
+G A KK+ + ++ +N Q + NT +++ L+ ++ D+ L+ +F +YG
Sbjct: 285 YVG-RAQKKSEREMELKEKFEKNVQ--EVAEKFQNTNLYLKNLEENIDDEKLRELFAEYG 341
Query: 300 ELVHVKIP-----AGKRCGFVQF-----ANR 320
+ K+ + GFV F ANR
Sbjct: 342 NITSCKVMRDSNGVSRGSGFVAFKSAEDANR 372
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 86/185 (46%), Gaps = 14/185 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L + + + +FG G S V+R+ S +GF+ F + AA + +Q
Sbjct: 215 NVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGK-SRCFGFVNFENADAAAQAVQE 273
Query: 135 FNGT-----------QMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG +E+ L + + + +++ +L ++ D L
Sbjct: 274 LNGKIFNDKELYVGRAQKKSEREMELKEKFEKNVQEVAEKFQNTNLYLKNLEENIDDEKL 333
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+E F A Y ++ KV+ D + G S+G GFV F + R++TEMNG + ++P+ +
Sbjct: 334 RELF-AEYGNITSCKVMRD-SNGVSRGSGFVAFKSAEDANRALTEMNGKMVGSKPLYVAL 391
Query: 244 AATKK 248
A K+
Sbjct: 392 AQRKE 396
>gi|297845300|ref|XP_002890531.1| PAB3 binding protein 3 [Arabidopsis lyrata subsp. lyrata]
gi|297336373|gb|EFH66790.1| PAB3 binding protein 3 [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 130/282 (46%), Gaps = 28/282 (9%)
Query: 41 VPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEF 100
+P P T VP P VA + SL+ GDL P + E+++ +F H
Sbjct: 18 IPSPTAQTSVQVPVSIPAPSPAAVADQTHPNS--SLYAGDLDPKVTEAHLFDLFKHVANV 75
Query: 101 VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR 160
VS +V R+ Q S GY +I F + A R ++ N T P E+ R+ + R
Sbjct: 76 VSVRVCRD-QNRRSLGYAYINFSNPNDAYRAMEALNYT--PLFERPIRIMLSNRDPSTRL 132
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
G IF+ +L A + + L ETF + + ++ KV D TGRSKGYGFV+F E
Sbjct: 133 SGKG---NIFIKNLDASIDNKALFETFSS-FGTILSCKVAMD-VTGRSKGYGFVQFEKEE 187
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
++ ++NG+L + + + +G ++ ++A +NT P T ++V
Sbjct: 188 SAQAAIDKLNGMLMNDKQVFVGHFIRRQ-------ERARDENTP------TPRFTNVYVK 234
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKI----PAGKRC-GFVQF 317
L + +D L+ FG++G + + RC GFV F
Sbjct: 235 NLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNF 276
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 18/187 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L + E + FG G S V+R++ N S +GF+ F AA ++
Sbjct: 230 NVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGN-SRCFGFVNFECTEAAASAVEK 288
Query: 135 FNGTQM-------------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDY 181
NG + E+ R + + G + +++ +L V D
Sbjct: 289 MNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGAN--LYLKNLDDSVDDE 346
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
L+E F + Y +V +KV+ + G S+G+GFV + + E LR+++EMNG + +P+ I
Sbjct: 347 KLKEMF-SEYGNVTSSKVMLN-PQGLSRGFGFVAYSNPEEALRALSEMNGKMIGKKPLYI 404
Query: 242 GPAATKK 248
A K+
Sbjct: 405 ALAQRKE 411
>gi|414588970|tpg|DAA39541.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 654
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 126/250 (50%), Gaps = 27/250 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL ++++ + +F G VS +V R+ + S GY ++ + + A R L+
Sbjct: 36 SLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALEL 95
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ ++ R+ G IF+ +L + + L +TF A + ++
Sbjct: 96 LNFT--PINGKPIRIMYSNRDPSSRKSGTG---NIFIKNLDKSIDNKALYDTFCA-FGNI 149
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
K+ TD +G S+GYGFV+F + ++ ++NG+L + + + +GP K Q
Sbjct: 150 LSCKIATD-PSGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGPFVRK------Q 202
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL---VHVKIPAGK- 310
++ N + S ++V L +VTDD LK +FG+YG + V ++ GK
Sbjct: 203 DRENVSSNIKFS---------NVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKS 253
Query: 311 RC-GFVQFAN 319
RC GFV F N
Sbjct: 254 RCFGFVNFEN 263
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 124/263 (47%), Gaps = 24/263 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P + G +++I +L ++ + F G +S K+ + + S GYGF++F
Sbjct: 115 PSSRKSGTGNIFIKNLDKSIDNKALYDTFCAFGNILSCKIATDP-SGESRGYGFVQFEKD 173
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD-----DGPDFT-IFVGDLAADVT 179
+A+ + NG + + G R+QD F+ ++V +L+ VT
Sbjct: 174 ESAQSAIDKLNGMLINDKK-------VFVGPFVRKQDRENVSSNIKFSNVYVKNLSDTVT 226
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
D L+E F Y ++ A V+ D + G+S+ +GFV F + +++ E+NG + + + +
Sbjct: 227 DDELKEMF-GKYGTITSAVVMRD-SDGKSRCFGFVNFENADAAAQAVQELNGKIFNDKEL 284
Query: 240 RIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
+G A KK+ + ++ +N Q + NT +++ L+ ++ D+ L+ +F +YG
Sbjct: 285 YVG-RAQKKSEREMELKEKFEKNVQ--EVAEKFQNTNLYLKNLEENIDDEKLRELFAEYG 341
Query: 300 ELVHVKIP-----AGKRCGFVQF 317
+ K+ + GFV F
Sbjct: 342 NITSCKVMRDSNGVSRGSGFVAF 364
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 86/185 (46%), Gaps = 14/185 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L + + + +FG G S V+R+ S +GF+ F + AA + +Q
Sbjct: 215 NVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGK-SRCFGFVNFENADAAAQAVQE 273
Query: 135 FNGT-----------QMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG +E+ L + + + +++ +L ++ D L
Sbjct: 274 LNGKIFNDKELYVGRAQKKSEREMELKEKFEKNVQEVAEKFQNTNLYLKNLEENIDDEKL 333
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+E F A Y ++ KV+ D + G S+G GFV F + R++TEMNG + ++P+ +
Sbjct: 334 RELF-AEYGNITSCKVMRD-SNGVSRGSGFVAFKSAEDANRALTEMNGKMVGSKPLYVAL 391
Query: 244 AATKK 248
A K+
Sbjct: 392 AQRKE 396
>gi|395507384|ref|XP_003758005.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Sarcophilus harrisii]
Length = 394
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 126/253 (49%), Gaps = 16/253 (6%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 8 MYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFYEHRHAAAALAAM 65
Query: 136 NGTQMPSTEQNFRLNWATYGAGERRQDDGP----------DFTIFVGDLAADVTDYVLQE 185
NG ++ E ++NWAT + +++ F +FVGDL+ ++T ++
Sbjct: 66 NGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTLRSQDHFHVFVGDLSPEITTEDIKA 123
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A
Sbjct: 124 AF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWAT 182
Query: 246 TKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHV 304
K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++ +
Sbjct: 183 RKPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEI 242
Query: 305 KIPAGKRCGFVQF 317
++ K FV+F
Sbjct: 243 RVFPDKGYSFVRF 255
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 107 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 166
Query: 136 NGTQMPSTEQNFRLNWAT---------YGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWAT Y + ++ Q + T++ G + + +
Sbjct: 167 GGQWLGGRQ--IRTNWATRKPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGL 224
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 225 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNG 270
>gi|281346697|gb|EFB22281.1| hypothetical protein PANDA_002889 [Ailuropoda melanoleuca]
Length = 377
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 126/252 (50%), Gaps = 16/252 (6%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFN 136
++G+L + E+ I +F G + K+I + N + Y F+EF H A L N
Sbjct: 1 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFYEHRHAAAALAAMN 58
Query: 137 GTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVLQET 186
G ++ E ++NWAT + +++ Q F +FVGDL+ ++T ++
Sbjct: 59 GRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAA 116
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A
Sbjct: 117 F-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR 175
Query: 247 KKAATGQQYQKATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++ ++
Sbjct: 176 KPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIR 235
Query: 306 IPAGKRCGFVQF 317
+ K FV+F
Sbjct: 236 VFPDKGYSFVRF 247
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 99 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 158
Query: 136 NGTQMPSTEQNFRLNWA---------TYGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWA TY + ++ Q + T++ G + + +
Sbjct: 159 GGQWLGGRQ--IRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGL 216
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 217 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNG 262
>gi|356564176|ref|XP_003550332.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 654
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 137/295 (46%), Gaps = 45/295 (15%)
Query: 34 QQQHQTPV---PPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIR-SLWIGDLQPWMEESY 89
Q QHQ+PV PPP G AP+ ++ + SL++GDL + +S
Sbjct: 5 QVQHQSPVSAAPPPNGGVAN--------------APNNANQFVTTSLYVGDLDQNVNDSQ 50
Query: 90 IASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRL 149
+ +F G+ VS +V R+ T S GYG++ F + A R L N T P ++ R+
Sbjct: 51 LYDLFNQVGQVVSVRVCRDLTTRRSLGYGYVNFSNPQDAARALDVLNFT--PLNNRSIRI 108
Query: 150 NWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSK 209
++ R+ IF+ +L + L +TF + + + K+ TD +G SK
Sbjct: 109 MYSHRDPSLRKSGTA---NIFIKNLDKAIDHKALHDTFSS-FGLILSCKIATD-ASGLSK 163
Query: 210 GYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGE 269
GYGFV+F +E ++ ++NG+L + + + +G K Q+ + + +
Sbjct: 164 GYGFVQFDNEEAAQNAIDKLNGMLINDKQVYVGHFLRK-------------QDRENALSK 210
Query: 270 NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGK-RC-GFVQFAN 319
NN ++V L S TD+ L FG+YG + I GK RC GFV F N
Sbjct: 211 TKFNN--VYVKNLSESTTDEELMINFGEYGTITSALIMRDADGKSRCFGFVNFEN 263
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 26/197 (13%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S ++++ +L + + FG G S ++R+ S +GF+ F + A
Sbjct: 209 SKTKFNNVYVKNLSESTTDEELMINFGEYGTITSALIMRDADGK-SRCFGFVNFENPDDA 267
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGA---GERRQ--------------DDGPDFTIFV 171
+ ++ NG + E W A ER Q D P +++
Sbjct: 268 AKAVEGLNGKKFDDKE------WYVGKAQKKSEREQELKGRFEQSIKEAADKYPGLNLYL 321
Query: 172 GDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
+L ++D L+E F A Y ++ KV+ D TG S+G GFV F E R++ EMNG
Sbjct: 322 KNLDDTISDEKLKEMF-ADYGTITSCKVMRD-PTGISRGSGFVAFSTPEEATRALGEMNG 379
Query: 232 VLCSTRPMRIGPAATKK 248
+ + +P+ + A K+
Sbjct: 380 KMFAGKPLYVALAQRKE 396
>gi|52346016|ref|NP_001005051.1| poly(A) binding protein, cytoplasmic 1 [Xenopus (Silurana)
tropicalis]
gi|49903495|gb|AAH76931.1| polyadenylate-binding protein 1 [Xenopus (Silurana) tropicalis]
Length = 634
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 118/257 (45%), Gaps = 26/257 (10%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG+YG + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKEMFGKYGPALSVK 221
Query: 306 IPA-----GKRCGFVQF 317
+ K GFV F
Sbjct: 222 VMTDDNGKSKGFGFVSF 238
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 91/192 (47%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKEMFGKYGPALSVKVMTDDNGK-SKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG M E+ L + R ++V +L
Sbjct: 244 AQKAVDDMNGKDMNGKAIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|224081795|ref|XP_002196994.1| PREDICTED: polyadenylate-binding protein 4 [Taeniopygia guttata]
Length = 629
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 118/250 (47%), Gaps = 24/250 (9%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
ASS + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F A
Sbjct: 5 ASSYPMASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPAD 64
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
AER L T N + + R+ W+ R+ G +F+ +L + + L +TF
Sbjct: 65 AERALDTMNFDVIKG--KPIRIMWSQRDPSLRKSGVG---NVFIKNLDKSIDNKALYDTF 119
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
A + ++ KVV D SKGY FV F + R++ +MNG+L + R + +G ++
Sbjct: 120 SA-FGNILSCKVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 248 KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI- 306
K + G T +++ + D+ LK +FG+YG+ + VK+
Sbjct: 177 K-------------EREAELGAKAKEFTNVYIKNFGDDMDDERLKELFGKYGKTLSVKVM 223
Query: 307 --PAGKRCGF 314
P GK GF
Sbjct: 224 TDPTGKSKGF 233
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G+ +S KV+ + T S+G+GF+ F H
Sbjct: 185 AKAKEFTNVYIKNFGDDMDDERLKELFGKYGKTLSVKVMTDP-TGKSKGFGFVSFEKHEE 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A + ++ NG + E+ L + R +++ +L
Sbjct: 244 ANKAVEEMNGKDINGKMLFVGRAQKKAERQAELKRRFEQLKQERLSRYQGVNLYIKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + S+ AKV+ + GRSKG+GFV F E +++TEMNG + +
Sbjct: 304 TIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 237 RPMRIGPAATK---KAATGQQY 255
+P+ + A K KA QY
Sbjct: 361 KPLYVALAQRKEERKAHLTNQY 382
>gi|402891170|ref|XP_003908827.1| PREDICTED: nucleolysin TIA-1 isoform p40, partial [Papio anubis]
Length = 377
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 126/252 (50%), Gaps = 16/252 (6%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFN 136
++G+L + E+ I +F G + K+I + N + Y F+EF H A L N
Sbjct: 1 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALAAMN 58
Query: 137 GTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVLQET 186
G ++ E ++NWAT + +++ Q F +FVGDL+ ++T ++
Sbjct: 59 GRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAA 116
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A
Sbjct: 117 F-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR 175
Query: 247 KKAATGQQYQKATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++ ++
Sbjct: 176 KPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIR 235
Query: 306 IPAGKRCGFVQF 317
+ K FV+F
Sbjct: 236 VFPDKGYSFVRF 247
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 99 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 158
Query: 136 NGTQMPSTEQNFRLNWA---------TYGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWA TY + ++ Q + T++ G + + +
Sbjct: 159 GGQWLGGRQ--IRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGL 216
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 217 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNG 262
>gi|358334962|dbj|GAA31742.2| polyadenylate-binding protein, partial [Clonorchis sinensis]
Length = 738
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 115/246 (46%), Gaps = 31/246 (12%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P E+ + S F G +S ++ R+ T S GYG++ F AER L+
Sbjct: 2 SLYVGDLHPLATEALLYSKFSEIGTVLSARICRDLATRNSLGYGYVNFEEPKDAERALEN 61
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + R+ W+ R+ G IF+ +L + L +TF + +
Sbjct: 62 LNYESF--MGRPIRIMWSQRDPSLRKSGKG---NIFIKNLDKTIDQKQLYDTF-SFIGKI 115
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG---PAATKKAAT 251
K+ D G SKGYGFV F E R++ ++NG++ + R + +G P++ +K+A+
Sbjct: 116 LSCKIAMDE-HGNSKGYGFVHFEKEECAERAIEKINGMMINDRVVYVGKFIPSSDRKSAS 174
Query: 252 GQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHV---KIPA 308
G K + N I+V P TD+ L+ +F ++GE+ K P
Sbjct: 175 G----KLRFNN--------------IYVKNFPPDTTDEKLRDMFSEFGEIKSCCVEKNPE 216
Query: 309 GKRCGF 314
GK GF
Sbjct: 217 GKSKGF 222
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 115/264 (43%), Gaps = 25/264 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L +++ + F G+ +S K+ ++ N S+GYGF+ F
Sbjct: 81 PSLRKSGKGNIFIKNLDKTIDQKQLYDTFSFIGKILSCKIAMDEHGN-SKGYGFVHFEKE 139
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWAT--YGAGERRQDDGPDF--TIFVGDLAADVTDY 181
AER ++ NG + N R+ + + +R+ G I+V + D TD
Sbjct: 140 ECAERAIEKINGMMI-----NDRVVYVGKFIPSSDRKSASGKLRFNNIYVKNFPPDTTDE 194
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
L++ F + + +K V G+SKG+GFV F D +++ M+G + R +
Sbjct: 195 KLRDMF-SEFGEIKSC-CVEKNPEGKSKGFGFVCFHDPDHAEQAVRVMHGKEINGRALY- 251
Query: 242 GPAATKKAATGQQYQKATYQNTQGSQGENDPN---NTTIFVGGLDPSVTDDILKTVFGQY 298
+A ++ Q+ Q + + E ++V LD ++ D+ LK F Y
Sbjct: 252 ----ASRAQRKEERQEELKQRLEKQRAERLSKYVPGVNLYVKNLDDNIDDERLKEAFSHY 307
Query: 299 GELVHVKIPA-----GKRCGFVQF 317
G + K+ K GFV F
Sbjct: 308 GPITSAKVMTDANGRSKGFGFVCF 331
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 25/191 (13%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ + P + + +F GE S V +N + S+G+GF+ F AE+ ++
Sbjct: 181 NIYVKNFPPDTTDEKLRDMFSEFGEIKSCCVEKNPEGK-SKGFGFVCFHDPDHAEQAVRV 239
Query: 135 FNGTQMPSTEQNFRLNWATYG-AGERRQDD----------------GPDFTIFVGDLAAD 177
+G ++ N R +A+ E RQ++ P ++V +L +
Sbjct: 240 MHGKEI-----NGRALYASRAQRKEERQEELKQRLEKQRAERLSKYVPGVNLYVKNLDDN 294
Query: 178 VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTR 237
+ D L+E F + Y + AKV+TD GRSKG+GFV F + R++TEMN L ++
Sbjct: 295 IDDERLKEAF-SHYGPITSAKVMTD-ANGRSKGFGFVCFTQPEQAARAVTEMNATLVGSK 352
Query: 238 PMRIGPAATKK 248
P+ + A K+
Sbjct: 353 PLYVALAQRKE 363
>gi|395501989|ref|XP_003755369.1| PREDICTED: nucleolysin TIAR [Sarcophilus harrisii]
Length = 392
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 126/258 (48%), Gaps = 20/258 (7%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIR----NKQTNFSEG-----------YGFIE 121
++G+L + E I +F G S K+I +++ N S G Y F+E
Sbjct: 15 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 74
Query: 122 FVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDY 181
F H A L NG ++ E ++NWAT + +++ D F +FVGDL+ ++T
Sbjct: 75 FYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTE 131
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G R +R
Sbjct: 132 DIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 190
Query: 242 GPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGE 300
A K A + T Q + ++ P N T++ GG+ +TD +++ F +G+
Sbjct: 191 NWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQ 250
Query: 301 LVHVKIPAGKRCGFVQFA 318
++ +++ K FV+F+
Sbjct: 251 IMEIRVFPEKGYSFVRFS 268
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 119 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 178
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDG---------------PDFTIFVGDLAADV 178
G + + R NWAT A + Q++ + T++ G +A+ +
Sbjct: 179 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 236
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 237 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 282
>gi|449282273|gb|EMC89133.1| Nucleolysin TIAR, partial [Columba livia]
Length = 378
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 126/258 (48%), Gaps = 20/258 (7%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIR----NKQTNFSEG-----------YGFIE 121
++G+L + E I +F G S K+I +++ N S G Y F+E
Sbjct: 1 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 60
Query: 122 FVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDY 181
F H A L NG ++ E ++NWAT + +++ D F +FVGDL+ ++T
Sbjct: 61 FYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTE 117
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G R +R
Sbjct: 118 DIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 176
Query: 242 GPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGE 300
A K A + T Q + ++ P N T++ GG+ +TD +++ F +G+
Sbjct: 177 NWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQ 236
Query: 301 LVHVKIPAGKRCGFVQFA 318
++ +++ K FV+F+
Sbjct: 237 IMEIRVFPEKGYSFVRFS 254
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 105 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 164
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDG---------------PDFTIFVGDLAADV 178
G + + R NWAT A + Q++ + T++ G +A+ +
Sbjct: 165 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 222
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 223 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 268
>gi|444315271|ref|XP_004178293.1| hypothetical protein TBLA_0A09920 [Tetrapisispora blattae CBS 6284]
gi|387511332|emb|CCH58774.1| hypothetical protein TBLA_0A09920 [Tetrapisispora blattae CBS 6284]
Length = 594
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 81/145 (55%), Gaps = 14/145 (9%)
Query: 116 GYGFIEFVSHAAAERVLQTFNGTQMPS-------------TEQNFRLNWATYGAGERRQD 162
GY F+EF + A+ L + N + +P+ +NFRLNWA+
Sbjct: 130 GYCFVEFANQVDAKFAL-SLNSSPIPNFYSSSISLHTNPNNNRNFRLNWASGATLNSSIP 188
Query: 163 DGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
P+F++FVGDL+ VT+ L F+ + SVK +V+TD TG S+ +GF+RF DE E+
Sbjct: 189 LTPEFSLFVGDLSPLVTEADLLSLFQKKFKSVKTVRVMTDPITGTSRCFGFIRFTDELER 248
Query: 223 LRSMTEMNGVLCSTRPMRIGPAATK 247
++ EMNG+ C+ RP+R+ A +
Sbjct: 249 KNALIEMNGIWCNGRPLRVAYATPR 273
>gi|359386152|gb|AEV43365.1| poly A-binding protein 2 [Citrus sinensis]
Length = 652
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 137/279 (49%), Gaps = 28/279 (10%)
Query: 44 PVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSG 103
PV QP P + GV DA SL++GDL + +S + +F G+ VS
Sbjct: 11 PVAVAAQPSPATNGIANNGGVG-DARQFVSTSLYVGDLDLSVNDSQLYDLFNQMGQVVSV 69
Query: 104 KVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDD 163
+V R+ T S GYG++ + + A R L N T P + R+ ++ R+
Sbjct: 70 RVCRDLSTRRSLGYGYVNYNAAHEATRALDELNFT--PLNGKPIRIMYSYRDPTIRKSGA 127
Query: 164 GPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQL 223
G IF+ +L + + L +TF + + ++ KV TD + G+S+GYGFV+F +E
Sbjct: 128 G---NIFIKNLDKSIDNKALHDTF-STFGNILSCKVATD-SLGQSRGYGFVQFDNEESAK 182
Query: 224 RSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLD 283
++ ++NG+L + + + +GP K Q +++T T+ NN ++V L
Sbjct: 183 SAIDKLNGMLLNDKQVFVGPFLRK------QERESTADKTRF-------NN--VYVKNLS 227
Query: 284 PSVTDDILKTVFGQYGELVHVKI---PAGK-RC-GFVQF 317
+ T+D LK +FG++G + + GK +C GFV F
Sbjct: 228 ETTTEDDLKKIFGEFGIITSTAVMRDADGKSKCFGFVNF 266
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 118/261 (45%), Gaps = 18/261 (6%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S KV + S GYGF++F +
Sbjct: 120 PTIRKSGAGNIFIKNLDKSIDNKALHDTFSTFGNILSCKVATDSLGQ-SRGYGFVQFDNE 178
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
+A+ + NG + + +Q F + E D ++V +L+ T+ L++
Sbjct: 179 ESAKSAIDKLNGMLL-NDKQVFVGPFLRKQERESTADKTRFNNVYVKNLSETTTEDDLKK 237
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F + + V+ D G+SK +GFV F D + RS+ +NG + +G A
Sbjct: 238 IF-GEFGIITSTAVMRD-ADGKSKCFGFVNFDDPDDAARSVEALNGKKFDDKEWYVGKAQ 295
Query: 246 TK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
K + +++++ + +G N ++V LD S++DD LK +F ++G +
Sbjct: 296 KKYEREMELKGKFEQSLKETADKFEGLN------LYVKNLDDSISDDKLKELFSEFGTIT 349
Query: 303 HVKI---PAG--KRCGFVQFA 318
K+ P G + GFV F+
Sbjct: 350 SCKVMRDPNGISRGSGFVAFS 370
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 16/195 (8%)
Query: 67 DASSDGIR--SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVS 124
++++D R ++++ +L E + IFG G S V+R+ S+ +GF+ F
Sbjct: 210 ESTADKTRFNNVYVKNLSETTTEDDLKKIFGEFGIITSTAVMRDADGK-SKCFGFVNFDD 268
Query: 125 HAAAERVLQTFNGTQMPSTE-------QNFRLNWATYGAGERRQDDGPD----FTIFVGD 173
A R ++ NG + E + + G E+ + D ++V +
Sbjct: 269 PDDAARSVEALNGKKFDDKEWYVGKAQKKYEREMELKGKFEQSLKETADKFEGLNLYVKN 328
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
L ++D L+E F + + ++ KV+ D G S+G GFV F E +++TEMNG +
Sbjct: 329 LDDSISDDKLKELF-SEFGTITSCKVMRD-PNGISRGSGFVAFSTAEEASKALTEMNGKM 386
Query: 234 CSTRPMRIGPAATKK 248
++P+ + A K+
Sbjct: 387 VVSKPLYVALAQRKE 401
>gi|26354649|dbj|BAC40951.1| unnamed protein product [Mus musculus]
Length = 636
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 118/252 (46%), Gaps = 24/252 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIKKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVK 221
Query: 306 I---PAGKRCGF 314
+ +GK GF
Sbjct: 222 VMTDESGKSKGF 233
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|444322688|ref|XP_004181985.1| hypothetical protein TBLA_0H01790 [Tetrapisispora blattae CBS 6284]
gi|387515031|emb|CCH62466.1| hypothetical protein TBLA_0H01790 [Tetrapisispora blattae CBS 6284]
Length = 674
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 94/185 (50%), Gaps = 20/185 (10%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNF----SEGYGFIEFVSHAAAER 130
L++GDL P +ES I I+ GE + K+I N + GY FIEF ++ A
Sbjct: 64 LYMGDLDPMWDESTIKQIWNSLGENNIVVKIITNSNMTSMGRNNPGYCFIEFSNYNNASN 123
Query: 131 VLQTFNGTQMPS-TEQNFRLNWATY-------------GAGERRQDDGPDFTIFVGDLAA 176
L NG +P + +LNWA+ DF++FVGDLA
Sbjct: 124 ALLK-NGLVIPGYNSKVLKLNWASMHTRSNGNTNCTANNNTSSNNSTNNDFSVFVGDLAP 182
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+VT+ L + F YSS AK+V D+ T SKGYGFVRF + ++Q RS+ EM GV +
Sbjct: 183 NVTEAQLFDLFINRYSSTIHAKIVYDQMTNVSKGYGFVRFNNSADQQRSLNEMQGVFLNG 242
Query: 237 RPMRI 241
R +R+
Sbjct: 243 RSIRV 247
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 38/50 (76%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DPNNTT+F+GGL V++ L++ F +G +V+VKIP GK CGFVQ+ +R
Sbjct: 336 DPNNTTVFIGGLSSLVSEGELRSYFQPFGTIVYVKIPVGKGCGFVQYVDR 385
>gi|193787802|dbj|BAG53005.1| unnamed protein product [Homo sapiens]
Length = 636
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 118/252 (46%), Gaps = 24/252 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGAALSVK 221
Query: 306 I---PAGKRCGF 314
+ +GK GF
Sbjct: 222 VMTDESGKSKGF 233
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKDLFGKFGAALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GINDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|31560656|ref|NP_032800.2| polyadenylate-binding protein 1 [Mus musculus]
gi|341941223|sp|P29341.2|PABP1_MOUSE RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|13278026|gb|AAH03870.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|15029950|gb|AAH11207.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|18606321|gb|AAH23145.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|26336853|dbj|BAC32110.1| unnamed protein product [Mus musculus]
gi|29145018|gb|AAH46233.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|74144576|dbj|BAE36120.1| unnamed protein product [Mus musculus]
gi|74145579|dbj|BAE36203.1| unnamed protein product [Mus musculus]
gi|74179929|dbj|BAE36522.1| unnamed protein product [Mus musculus]
gi|74198265|dbj|BAE35302.1| unnamed protein product [Mus musculus]
gi|74198320|dbj|BAE35327.1| unnamed protein product [Mus musculus]
gi|74214225|dbj|BAE40360.1| unnamed protein product [Mus musculus]
gi|74223327|dbj|BAE21553.1| unnamed protein product [Mus musculus]
gi|148676871|gb|EDL08818.1| poly A binding protein, cytoplasmic 1 [Mus musculus]
Length = 636
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 118/252 (46%), Gaps = 24/252 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVK 221
Query: 306 I---PAGKRCGF 314
+ +GK GF
Sbjct: 222 VMTDESGKSKGF 233
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|291388359|ref|XP_002710763.1| PREDICTED: poly A binding protein, cytoplasmic 4 [Oryctolagus
cuniculus]
Length = 636
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 118/252 (46%), Gaps = 24/252 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
Query: 306 I---PAGKRCGF 314
+ +GK GF
Sbjct: 222 VMTDESGKSKGF 233
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|281338083|gb|EFB13667.1| hypothetical protein PANDA_003438 [Ailuropoda melanoleuca]
Length = 340
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 126/258 (48%), Gaps = 20/258 (7%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIR----NKQTNFSEG-----------YGFIE 121
++G+L + E I +F G S K+I +++ N S G Y F+E
Sbjct: 1 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 60
Query: 122 FVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDY 181
F H A L NG ++ E ++NWAT + +++ D F +FVGDL+ ++T
Sbjct: 61 FYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTE 117
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G R +R
Sbjct: 118 DIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 176
Query: 242 GPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGE 300
A K A + T Q + ++ P N T++ GG+ +TD +++ F +G+
Sbjct: 177 NWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQ 236
Query: 301 LVHVKIPAGKRCGFVQFA 318
++ +++ K FV+F+
Sbjct: 237 IMEIRVFPEKGYSFVRFS 254
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 105 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 164
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDG---------------PDFTIFVGDLAADV 178
G + + R NWAT A + Q++ + T++ G +A+ +
Sbjct: 165 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 222
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 223 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 268
>gi|149637721|ref|XP_001509272.1| PREDICTED: polyadenylate-binding protein 1-like [Ornithorhynchus
anatinus]
Length = 636
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 118/252 (46%), Gaps = 24/252 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVK 221
Query: 306 I---PAGKRCGF 314
+ +GK GF
Sbjct: 222 VMTDESGKSKGF 233
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|255719794|ref|XP_002556177.1| KLTH0H06842p [Lachancea thermotolerans]
gi|238942143|emb|CAR30315.1| KLTH0H06842p [Lachancea thermotolerans CBS 6340]
Length = 547
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 104/251 (41%), Gaps = 87/251 (34%)
Query: 78 IGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQ---------TNFSE------------- 115
+GDL P +E+ I I+ H G+ VS K+IR K+ + FS+
Sbjct: 1 MGDLDPSFDEATIQRIWAHLGKRVSVKLIRAKKNLLIPCSTSSTFSDTQPQAPAPEGSGA 60
Query: 116 -------------------------------GYGFIEFVSHAAAERVLQTFNGTQMPSTE 144
GY F+EF S A A+ L T N T +P
Sbjct: 61 LRAPDADGAGRKIHINGVSFIDPNTTQLHHAGYCFVEFESLADAQWAL-TLNSTPLPDIT 119
Query: 145 ---------------------------------QNFRLNWATYGAGERRQDDGPDFTIFV 171
+NFRLNWA+ P+F++FV
Sbjct: 120 CPGPAAADMASPAGSPAAGPDASSPLRTNPTGLRNFRLNWASGATLLSAIPSTPEFSLFV 179
Query: 172 GDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
GDL+ T+ L F+ + SVK +V+TD TG S+ +GFVRFGDE E+ R++ EMNG
Sbjct: 180 GDLSPTATEAHLLSLFQKKFKSVKTVRVMTDPITGASRCFGFVRFGDEQERRRALVEMNG 239
Query: 232 VLCSTRPMRIG 242
V C R +R+
Sbjct: 240 VWCQGRNLRVA 250
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
+PNNTT+F+GGL ++ L ++F +G +++VKIP GK CGFV++A R
Sbjct: 402 NPNNTTVFIGGLTSHTSERQLHSLFAPFGTIINVKIPPGKGCGFVKYAYR 451
>gi|417410268|gb|JAA51610.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily, partial [Desmodus rotundus]
Length = 382
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 126/258 (48%), Gaps = 20/258 (7%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIR----NKQTNFSEG-----------YGFIE 121
++G+L + E I +F G S K+I +++ N S G Y F+E
Sbjct: 1 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 60
Query: 122 FVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDY 181
F H A L NG ++ E ++NWAT + +++ D F +FVGDL+ ++T
Sbjct: 61 FYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTE 117
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G R +R
Sbjct: 118 DIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 176
Query: 242 GPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGE 300
A K A + T Q + ++ P N T++ GG+ +TD +++ F +G+
Sbjct: 177 NWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQ 236
Query: 301 LVHVKIPAGKRCGFVQFA 318
++ +++ K FV+F+
Sbjct: 237 IMEIRVFPEKGYSFVRFS 254
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 105 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 164
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDG---------------PDFTIFVGDLAADV 178
G + + R NWAT A + Q++ + T++ G +A+ +
Sbjct: 165 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 222
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 223 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 268
>gi|355562824|gb|EHH19418.1| hypothetical protein EGK_20118, partial [Macaca mulatta]
gi|355766617|gb|EHH62534.1| hypothetical protein EGM_20905, partial [Macaca fascicularis]
gi|440900070|gb|ELR51281.1| Nucleolysin TIAR, partial [Bos grunniens mutus]
Length = 381
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 126/258 (48%), Gaps = 20/258 (7%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIR----NKQTNFSEG-----------YGFIE 121
++G+L + E I +F G S K+I +++ N S G Y F+E
Sbjct: 1 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 60
Query: 122 FVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDY 181
F H A L NG ++ E ++NWAT + +++ D F +FVGDL+ ++T
Sbjct: 61 FYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTE 117
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G R +R
Sbjct: 118 DIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 176
Query: 242 GPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGE 300
A K A + T Q + ++ P N T++ GG+ +TD +++ F +G+
Sbjct: 177 NWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQ 236
Query: 301 LVHVKIPAGKRCGFVQFA 318
++ +++ K FV+F+
Sbjct: 237 IMEIRVFPEKGYSFVRFS 254
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 105 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 164
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDG---------------PDFTIFVGDLAADV 178
G + + R NWAT A + Q++ + T++ G +A+ +
Sbjct: 165 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 222
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 223 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 268
>gi|431901758|gb|ELK08635.1| Polyadenylate-binding protein 1 [Pteropus alecto]
Length = 636
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 118/252 (46%), Gaps = 24/252 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
Query: 306 I---PAGKRCGF 314
+ +GK GF
Sbjct: 222 VMTDESGKSKGF 233
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|327283838|ref|XP_003226647.1| PREDICTED: polyadenylate-binding protein 1-like [Anolis
carolinensis]
Length = 636
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 118/252 (46%), Gaps = 24/252 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVK 221
Query: 306 I---PAGKRCGF 314
+ +GK GF
Sbjct: 222 VMTDESGKSKGF 233
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|41386798|ref|NP_776993.1| polyadenylate-binding protein 1 [Bos taurus]
gi|46367787|ref|NP_002559.2| polyadenylate-binding protein 1 [Homo sapiens]
gi|383872540|ref|NP_001244826.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|73974130|ref|XP_856708.1| PREDICTED: polyadenylate-binding protein 1 isoform 6 [Canis lupus
familiaris]
gi|194036975|ref|XP_001927782.1| PREDICTED: polyadenylate-binding protein 1 [Sus scrofa]
gi|332213999|ref|XP_003256115.1| PREDICTED: polyadenylate-binding protein 1 [Nomascus leucogenys]
gi|344273312|ref|XP_003408467.1| PREDICTED: polyadenylate-binding protein 1-like [Loxodonta
africana]
gi|402878853|ref|XP_003903080.1| PREDICTED: polyadenylate-binding protein 1 [Papio anubis]
gi|3183544|sp|P11940.2|PABP1_HUMAN RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|47117093|sp|P61286.1|PABP1_BOVIN RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|1562511|gb|AAD08718.1| poly(A)-binding protein [Homo sapiens]
gi|8979741|emb|CAB96752.1| polyadenylate-binding protein 1 [Bos taurus]
gi|16358990|gb|AAH15958.1| PABPC1 protein [Homo sapiens]
gi|23270713|gb|AAH23520.1| Poly(A) binding protein, cytoplasmic 1 [Homo sapiens]
gi|74268035|gb|AAI02366.1| Poly(A) binding protein, cytoplasmic 1 [Bos taurus]
gi|119612221|gb|EAW91815.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_b [Homo
sapiens]
gi|119612223|gb|EAW91817.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_b [Homo
sapiens]
gi|123993665|gb|ABM84434.1| poly(A) binding protein, cytoplasmic 1 [synthetic construct]
gi|123999981|gb|ABM87499.1| poly(A) binding protein, cytoplasmic 1 [synthetic construct]
gi|168278070|dbj|BAG11013.1| polyadenylate-binding protein 1 [synthetic construct]
gi|296480464|tpg|DAA22579.1| TPA: polyadenylate-binding protein 1 [Bos taurus]
gi|380811722|gb|AFE77736.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|384940022|gb|AFI33616.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|384940024|gb|AFI33617.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 636
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 118/252 (46%), Gaps = 24/252 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
Query: 306 I---PAGKRCGF 314
+ +GK GF
Sbjct: 222 VMTDESGKSKGF 233
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|121702907|ref|XP_001269718.1| polyadenylate-binding protein [Aspergillus clavatus NRRL 1]
gi|158512635|sp|A1CRM1.1|PABP_ASPCL RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|119397861|gb|EAW08292.1| polyadenylate-binding protein [Aspergillus clavatus NRRL 1]
Length = 754
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 117/243 (48%), Gaps = 23/243 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++G+L P + E+ + +F G+ S +V R+ T S GY ++ + + A ER L+
Sbjct: 52 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 111
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T + + R+ W+ R+ G +F+ +L + + + L +TF A + ++
Sbjct: 112 LNYTLIKG--KPCRIMWSQRDPALRKTGQG---NVFIKNLDSAIDNKALHDTF-AAFGNI 165
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV D G SKGYGFV + ++ +NG+L + + + +G +KK
Sbjct: 166 LSCKVAQDE-FGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKK------ 218
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKR 311
+ Q E N T I++ +DP VT++ + +F Q+GE+ + P GK
Sbjct: 219 -------DRQSKFDEMKANFTNIYIKNIDPDVTEEEFRKIFEQFGEITSATLSRDPEGKS 271
Query: 312 CGF 314
GF
Sbjct: 272 RGF 274
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 112/248 (45%), Gaps = 19/248 (7%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S KV +++ N S+GYGF+ + +
Sbjct: 131 PALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETA 189
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQ 184
AA ++ NG + + + + + + +FT I++ ++ DVT +
Sbjct: 190 EAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFDEMKANFTNIYIKNIDPDVT----E 245
Query: 185 ETFRAVYS---SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
E FR ++ + A + D G+S+G+GFV + ++ EM+ T+ + +
Sbjct: 246 EEFRKIFEQFGEITSATLSRD-PEGKSRGFGFVNYSTHESAQAAVDEMHDKEVKTQKLYV 304
Query: 242 GPAATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQY 298
G A K + +QY+ A + QG N ++V L V D+ L+ +FG Y
Sbjct: 305 GRAQKKHEREEELRKQYEAARLEKASKYQGVN------LYVKNLTDDVDDEKLRELFGPY 358
Query: 299 GELVHVKI 306
G + K+
Sbjct: 359 GTITSAKV 366
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 93/254 (36%), Gaps = 69/254 (27%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+++I ++ P + E IF GE S + R+ + S G+GF+ + +H +A+ +
Sbjct: 233 NIYIKNIDPDVTEEEFRKIFEQFGEITSATLSRDPEGK-SRGFGFVNYSTHESAQAAVDE 291
Query: 135 FNGTQMPS-------------TEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDY 181
+ ++ + E+ R + + + G ++V +L DV D
Sbjct: 292 MHDKEVKTQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQG--VNLYVKNLTDDVDDE 349
Query: 182 VLQETFRAVYSSVKGAKVVTDRT------------------------------------- 204
L+E F Y ++ AKV+ D T
Sbjct: 350 KLRELF-GPYGTITSAKVMRDSTPAERTETPDSEKEKEVNKENEKKEDEEKAAEEKPKES 408
Query: 205 ---------------TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA 249
G+SKG+GFV F E +++TEMN + + +P+ + A K
Sbjct: 409 DEEKKDETKKSDKKLLGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDV 468
Query: 250 ATGQQYQKATYQNT 263
Q +NT
Sbjct: 469 RRSQLEASIQARNT 482
>gi|387017716|gb|AFJ50976.1| Polyadenylate-binding protein 1-like [Crotalus adamanteus]
Length = 636
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 118/252 (46%), Gaps = 24/252 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVK 221
Query: 306 I---PAGKRCGF 314
+ +GK GF
Sbjct: 222 VMTDESGKSKGF 233
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|431895395|gb|ELK04911.1| Nucleolysin TIAR [Pteropus alecto]
Length = 428
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 126/258 (48%), Gaps = 20/258 (7%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIR----NKQTNFSEG-----------YGFIE 121
++G+L + E I +F G S K+I +++ N S G Y F+E
Sbjct: 48 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 107
Query: 122 FVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDY 181
F H A L NG ++ E ++NWAT + +++ D F +FVGDL+ ++T
Sbjct: 108 FYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTE 164
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G R +R
Sbjct: 165 DIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 223
Query: 242 GPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGE 300
A K A + T Q + ++ P N T++ GG+ +TD +++ F +G+
Sbjct: 224 NWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQ 283
Query: 301 LVHVKIPAGKRCGFVQFA 318
++ +++ K FV+F+
Sbjct: 284 IMEIRVFPEKGYSFVRFS 301
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 152 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 211
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDG---------------PDFTIFVGDLAADV 178
G + + R NWAT A + Q++ + T++ G +A+ +
Sbjct: 212 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 269
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 270 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 315
>gi|226496737|ref|NP_001151785.1| LOC100285420 [Zea mays]
gi|195649671|gb|ACG44303.1| polyadenylate-binding protein 2 [Zea mays]
gi|414586484|tpg|DAA37055.1| TPA: polyadenylate-binding protein 2 [Zea mays]
Length = 660
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 118/250 (47%), Gaps = 27/250 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL+ + +S + +F G+ VS +V R+ + S GY ++ F + A R L+
Sbjct: 41 SLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNFNNPLDAARALEV 100
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N P + R+ ++ RR IF+ +L + + L ETF + + ++
Sbjct: 101 LNFA--PLNNKPIRVMYSNRDPSSRRSGSA---NIFIKNLDKMIDNKSLHETFSS-FGTI 154
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV D G+SKG+GFV++ E ++ +NG+L + +P+ +GP +K
Sbjct: 155 LSCKVAMDE-GGQSKGFGFVQYEKEEAAQNAIKSLNGMLINDKPVFVGP-FLRKQERDHS 212
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL----VHVKIPAGK 310
+ K + N +FV L S T + L +FG+YG + V + +
Sbjct: 213 FDKTKFNN--------------VFVKNLSESTTKEDLLKIFGEYGNITSAVVMIGMDGKS 258
Query: 311 RC-GFVQFAN 319
RC GF+ F N
Sbjct: 259 RCFGFINFEN 268
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 14/185 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L + + IFG G S V+ S +GFI F + AA R +Q
Sbjct: 220 NVFVKNLSESTTKEDLLKIFGEYGNITSAVVMIGMDGK-SRCFGFINFENPDAASRAVQE 278
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG ++ +E+ L + D +++ +L + D L
Sbjct: 279 LNGKKINDKEWYVGRAQKKSEREMELKRRFEQILKDAADKYQGLNLYLKNLDDSIGDDQL 338
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+E F + + + KV+ D+ G SKG GFV F E +++TEMNG + S +P+ +
Sbjct: 339 RELF-SNFGKITSCKVMRDQN-GLSKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAF 396
Query: 244 AATKK 248
A K+
Sbjct: 397 AQRKE 401
>gi|169853086|ref|XP_001833224.1| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
gi|116505602|gb|EAU88497.1| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
Length = 681
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 114/248 (45%), Gaps = 25/248 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++G+L P + E+ + IF G S +V R+ T S GY ++ +++ A ER L+
Sbjct: 50 SLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQ 109
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + + + R+ W+ R+ G IF+ +L + + L +TF A + +V
Sbjct: 110 LNYSLI--KNRPCRIMWSQRDPALRKTGQG---NIFIKNLDEAIDNKALHDTF-AAFGTV 163
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV TD TGRSKGYGFV + ++ +NG+L + + + +G ++K
Sbjct: 164 LSCKVATDE-TGRSKGYGFVHYETAEAAENAIKAVNGMLLNDKKVYVGHHISRK------ 216
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA-----G 309
Q E T ++V LDP VT D +F +YG + I
Sbjct: 217 -------ERQSKLEEMRAQFTNLYVKNLDPEVTQDEFIELFKKYGNVTSAVISVDEEGKS 269
Query: 310 KRCGFVQF 317
K GFV F
Sbjct: 270 KGFGFVNF 277
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 91/203 (44%), Gaps = 19/203 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+L++ +L P + + +F G V+ VI + S+G+GF+ F +H A++ +
Sbjct: 231 NLYVKNLDPEVTQDEFIELFKKYGN-VTSAVISVDEEGKSKGFGFVNFETHDEAQKAVDE 289
Query: 135 FNGTQM-------------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDY 181
N ++ E+ R ++ + + G +++ +L DV D
Sbjct: 290 LNDFELKGKKLFVSRAQKKAEREEELRRSYEQAKLEKLSKYQG--VNLYIKNLEDDVDDD 347
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
L+ F + ++ KV+ D G+SKG+GFV F E +++ EMN + T+P+ +
Sbjct: 348 KLRAEFEP-FGTITSCKVMRDEK-GQSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYV 405
Query: 242 GPAATKKAATGQQYQKATYQNTQ 264
A ++ QQ + Q Q
Sbjct: 406 S-LAQRREVRRQQLESQIAQRNQ 427
>gi|71896197|ref|NP_001026768.1| polyadenylate-binding protein 1 [Gallus gallus]
gi|53130422|emb|CAG31540.1| hypothetical protein RCJMB04_7l20 [Gallus gallus]
Length = 637
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 118/252 (46%), Gaps = 24/252 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVK 221
Query: 306 I---PAGKRCGF 314
+ +GK GF
Sbjct: 222 VMTDESGKSKGF 233
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKRVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|19705459|ref|NP_599180.1| polyadenylate-binding protein 1 [Rattus norvegicus]
gi|47605941|sp|Q9EPH8.1|PABP1_RAT RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|12188891|emb|CAC21554.1| poly(A) binding protein [Rattus norvegicus]
gi|52789215|gb|AAH83176.1| Poly(A) binding protein, cytoplasmic 1 [Rattus norvegicus]
gi|149066519|gb|EDM16392.1| rCG60104 [Rattus norvegicus]
Length = 636
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 118/252 (46%), Gaps = 24/252 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVK 221
Query: 306 I---PAGKRCGF 314
+ +GK GF
Sbjct: 222 VMTDESGKSKGF 233
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|74212334|dbj|BAE30919.1| unnamed protein product [Mus musculus]
Length = 636
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 118/257 (45%), Gaps = 26/257 (10%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVK 221
Query: 306 IPA-----GKRCGFVQF 317
+ K GFV F
Sbjct: 222 VMTDEGGKSKGFGFVSF 238
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 93/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + + S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-EGGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|242802487|ref|XP_002483981.1| polyadenylate-binding protein [Talaromyces stipitatus ATCC 10500]
gi|218717326|gb|EED16747.1| polyadenylate-binding protein [Talaromyces stipitatus ATCC 10500]
Length = 751
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 125/265 (47%), Gaps = 34/265 (12%)
Query: 64 VAPD-ASSDGI----------RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTN 112
VAPD A+SD SL++G+L P + E+ + +F G+ S +V R+ T
Sbjct: 29 VAPDTATSDAATTPNPNQPHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTR 88
Query: 113 FSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVG 172
S GY ++ + + A ER L+ N T + + R+ W+ R+ G +F+
Sbjct: 89 RSLGYAYVNYNNTADGERALEDLNYTLIKG--RPCRIMWSQRDPALRKTGQG---NVFIK 143
Query: 173 DLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGV 232
+L + + L +TF A + ++ KV D G SKGYGFV + ++ +NG+
Sbjct: 144 NLDTAIDNKALHDTF-AAFGNILSCKVAQDE-FGNSKGYGFVHYETAEAANNAIKHVNGM 201
Query: 233 LCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILK 292
L + + + +G +KK + Q E N T ++V +DP VTD+ +
Sbjct: 202 LLNDKKVFVGHHISKK-------------DRQSKFEEMKANFTNVYVKNIDPEVTDEEFR 248
Query: 293 TVFGQYGELVHVKIP---AGKRCGF 314
+FG+YG++ I +GK GF
Sbjct: 249 ELFGKYGDITSATISRDDSGKSRGF 273
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 111/236 (47%), Gaps = 13/236 (5%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+++I +L ++ + F G +S KV +++ N S+GYGF+ + + AA ++
Sbjct: 139 NVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKH 197
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQETFRAVYSS 193
NG + + + + + ++ +FT ++V ++ +VTD +E F Y
Sbjct: 198 VNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYVKNIDPEVTDEEFRELF-GKYGD 256
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK---KAA 250
+ A + D +G+S+G+GFV + D ++ E+N ++ + +G A K +
Sbjct: 257 ITSATISRD-DSGKSRGFGFVNYVDHQNAQSAVDELNDKDFHSQKLYVGRAQKKHEREEE 315
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
+QY+ A + QG N ++V L V DD L+ +F +G + K+
Sbjct: 316 LRRQYEAARLEKASKYQGVN------LYVKNLTDDVDDDKLRELFSPFGTITSAKV 365
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 89/247 (36%), Gaps = 60/247 (24%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ ++ P + + +FG G+ S + R+ + S G+GF+ +V H A+ +
Sbjct: 232 NVYVKNIDPEVTDEEFRELFGKYGDITSATISRD-DSGKSRGFGFVNYVDHQNAQSAVDE 290
Query: 135 FN-----------GTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
N G E+ L A + ++V +L DV D L
Sbjct: 291 LNDKDFHSQKLYVGRAQKKHEREEELRRQYEAARLEKASKYQGVNLYVKNLTDDVDDDKL 350
Query: 184 QETFRAVYSSVKGAKVVTDRTT-------------------------------------- 205
+E F + + ++ AKV+ D
Sbjct: 351 RELF-SPFGTITSAKVMRDTVGVSSDSDKEEGKEASEKEGEEASEKEETKVKAEDEEKTE 409
Query: 206 ---------GRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ 256
G+SKG+GFV F E +++TEMN + + +P+ + A K Q
Sbjct: 410 TKKPEKKVFGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRKSQLEA 469
Query: 257 KATYQNT 263
+NT
Sbjct: 470 SIQARNT 476
>gi|126304035|ref|XP_001381740.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Monodelphis domestica]
Length = 409
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 126/257 (49%), Gaps = 16/257 (6%)
Query: 72 GIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
G ++G+L + E+ I +F G + K+I + N + Y F+EF H A
Sbjct: 19 GKEGKYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFYEHRHAAAA 76
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP----------DFTIFVGDLAADVTDY 181
L NG ++ E ++NWAT + +++ F +FVGDL+ ++T
Sbjct: 77 LAAMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTLRSQDHFHVFVGDLSPEITTE 134
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
++ F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 135 DIKAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRT 193
Query: 242 GPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGE 300
A K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+
Sbjct: 194 NWATRKPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQ 253
Query: 301 LVHVKIPAGKRCGFVQF 317
++ +++ K FV+F
Sbjct: 254 IMEIRVFPDKGYSFVRF 270
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 122 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 181
Query: 136 NGTQMPSTEQNFRLNWAT---------YGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWAT Y + ++ Q + T++ G + + +
Sbjct: 182 GGQWLGGRQ--IRTNWATRKPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGL 239
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 240 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNG 285
>gi|7673355|gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana tabacum]
Length = 649
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 125/252 (49%), Gaps = 27/252 (10%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+ SL++GDL + +S + +F G+ VS +V R+ + S GYG++ + + A R L
Sbjct: 26 VTSLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAARAL 85
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
+ N T P + R+ ++ RR +G IF+ +L + L +TF A +
Sbjct: 86 EVLNFT--PLHGKPIRIMYSNRDPTIRRSGNG---NIFIKNLDKAIDHKALHDTFSA-FG 139
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
++ KV D ++G+SKGYGFV++ E +++ ++NG+L + + + +GP +K
Sbjct: 140 NILSCKVAVD-SSGQSKGYGFVQYDSEEAAQKAIEKLNGMLLNDKQVYVGP-FVRKHERD 197
Query: 253 QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA---G 309
K + T +FV L S ++ L+ +FG++G + V + G
Sbjct: 198 MAVDKTRF--------------TNVFVKNLSESTLEEELRKIFGEFGAITSVAVMKDEDG 243
Query: 310 K-RC-GFVQFAN 319
K RC GFV F N
Sbjct: 244 KSRCFGFVNFEN 255
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 67 DASSDGIR--SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVS 124
D + D R ++++ +L E + IFG G S V++++ S +GF+ F +
Sbjct: 197 DMAVDKTRFTNVFVKNLSESTLEEELRKIFGEFGAITSVAVMKDEDGK-SRCFGFVNFEN 255
Query: 125 HAAAERVLQTFNGTQMPS-----------TEQNFRLNWATYGAGERRQDDGPDFTIFVGD 173
A R ++ NG ++ + +E+ L + + D +++ +
Sbjct: 256 AEDAARAVEALNGYKLDNKDWFVGRAQKKSEREMELKHRFEQSAKEAVDKSQGLNLYIKN 315
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
L ++D L+E F + Y ++ KV+ D +G SKG GFV F + E R+++EMNG +
Sbjct: 316 LDDSISDEKLKELF-SPYGTITSCKVMRD-PSGVSKGSGFVAFSNPEEASRALSEMNGKM 373
Query: 234 CSTRPMRIGPAATKK 248
++P+ + A K+
Sbjct: 374 VVSKPLYVALAQRKE 388
>gi|357475273|ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula]
gi|355508977|gb|AES90119.1| Poly(A)-binding protein [Medicago truncatula]
Length = 654
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 125/250 (50%), Gaps = 31/250 (12%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL + +S + +F G+ VS +V R+ T S GYG++ + + A R L
Sbjct: 35 SLYVGDLDMNVTDSQLYDLFNQLGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARALDV 94
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ ++ R+ G IF+ +L + L +TF + + ++
Sbjct: 95 LNFT--PLNNRPIRIMYSHRDPSIRKSGQG---NIFIKNLDKAIDHKALHDTFSS-FGNI 148
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK--KAATG 252
KV D +G+SKGYGFV+F E +++ ++NG+L + + + +GP K + +TG
Sbjct: 149 LSCKVAVD-GSGQSKGYGFVQFDTEEAAQKAIEKLNGMLLNDKQVYVGPFLRKQERESTG 207
Query: 253 QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL---VHVKIPAG 309
+A + N +FV L S TDD LK FG++G + V ++ G
Sbjct: 208 ---DRAKFNN--------------VFVKNLSESTTDDELKKTFGEFGTITSAVVMRDGDG 250
Query: 310 K-RC-GFVQF 317
K +C GFV F
Sbjct: 251 KSKCFGFVNF 260
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 14/185 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L + + FG G S V+R+ S+ +GF+ F S A R ++
Sbjct: 214 NVFVKNLSESTTDDELKKTFGEFGTITSAVVMRDGDGK-SKCFGFVNFESTDDAARAVEA 272
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG ++ +E+ L + + D ++V +L + D L
Sbjct: 273 LNGKKIDDKEWYVGKAQKKSEREHELKIKFEQSMKEAADKYQGANLYVKNLDDSIADEKL 332
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+E F + Y ++ KV+ D G S+G GFV F E R++ EMNG + +++P+ +
Sbjct: 333 KELFSS-YGTITSCKVMRD-PNGVSRGSGFVAFSTPEEASRALLEMNGKMVASKPLYVTL 390
Query: 244 AATKK 248
A K+
Sbjct: 391 AQRKE 395
>gi|317106694|dbj|BAJ53195.1| JHL03K20.4 [Jatropha curcas]
Length = 642
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 138/274 (50%), Gaps = 28/274 (10%)
Query: 52 VPPPSQQTQPYGVAPDASSDGI-RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQ 110
V P + + P GV + + + SL++GDL+ + E+ + +F G+ VS +V R+
Sbjct: 6 VQPQAPVSAPNGVVSNGVNQFVPTSLYVGDLEQNVTETQLYDLFNQHGQVVSIRVCRDLT 65
Query: 111 TNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIF 170
+ S GYG++ + + A + ++ N T P + R+ ++ R+ G I+
Sbjct: 66 SRRSLGYGYVNYNNVHDAAQAIEVLNFT--PVNGKPIRIMYSYRDPTIRKSGTG---NIY 120
Query: 171 VGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMN 230
+ +L + + L +TF A + S+ KV TD + G+S GYGFV+F +E ++ ++N
Sbjct: 121 IKNLDKAIDNKALHDTFSA-FGSILSCKVATD-SLGQSLGYGFVQFDNEESAKNAIDKLN 178
Query: 231 GVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDI 290
G+L + + + +GP +K KAT+ N ++V L + T++
Sbjct: 179 GMLLNDKQVYVGP-FLRKQERESAIDKATFNN--------------VYVKNLSETTTEED 223
Query: 291 LKTVFGQYGEL---VHVKIPAGK-RC-GFVQFAN 319
LK +FG+YG + V ++ GK RC GFV F N
Sbjct: 224 LKKIFGEYGTITSAVVMRDGNGKSRCFGFVNFEN 257
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 119/261 (45%), Gaps = 18/261 (6%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S KV + S GYGF++F +
Sbjct: 109 PTIRKSGTGNIYIKNLDKAIDNKALHDTFSAFGSILSCKVATDSLGQ-SLGYGFVQFDNE 167
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
+A+ + NG + + +Q + + E D ++V +L+ T+ L++
Sbjct: 168 ESAKNAIDKLNGMLL-NDKQVYVGPFLRKQERESAIDKATFNNVYVKNLSETTTEEDLKK 226
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F Y ++ A V+ D G+S+ +GFV F + + +S+ +NG + +G A
Sbjct: 227 IF-GEYGTITSAVVMRD-GNGKSRCFGFVNFENPDDAAQSVEALNGKTFDEKEWYVGKAQ 284
Query: 246 TK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
K + ++++ + QG N ++V LD S+TDD LK +F ++G +
Sbjct: 285 KKSEREVELKGRFEQTLKETVDKFQGLN------LYVKNLDDSITDDKLKELFSEFGTIT 338
Query: 303 HVKI---PAG--KRCGFVQFA 318
K+ P G + GFV F+
Sbjct: 339 SCKVMRDPNGVSRGSGFVAFS 359
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 14/185 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L E + IFG G S V+R+ S +GF+ F + A + ++
Sbjct: 209 NVYVKNLSETTTEEDLKKIFGEYGTITSAVVMRDGNGK-SRCFGFVNFENPDDAAQSVEA 267
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG +E+ L + D ++V +L +TD L
Sbjct: 268 LNGKTFDEKEWYVGKAQKKSEREVELKGRFEQTLKETVDKFQGLNLYVKNLDDSITDDKL 327
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+E F + + ++ KV+ D G S+G GFV F E R++TEMNG + ++P+ +
Sbjct: 328 KELF-SEFGTITSCKVMRD-PNGVSRGSGFVAFSTAEEASRALTEMNGKMVVSKPLYVAL 385
Query: 244 AATKK 248
A K+
Sbjct: 386 AQRKE 390
>gi|72534835|ref|NP_001026846.1| poly A binding protein, cytoplasmic 1 a [Danio rerio]
gi|71534060|gb|AAH99992.1| Poly A binding protein, cytoplasmic 1 a [Danio rerio]
Length = 634
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 116/252 (46%), Gaps = 24/252 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMMTRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--RPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +F +YG + ++
Sbjct: 175 SRK-------------EREAEMGARAKEFTNVYIKNFGEDMDDEKLKEIFCKYGPALSIR 221
Query: 306 I---PAGKRCGF 314
+ +GK GF
Sbjct: 222 VMTDDSGKSKGF 233
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + IF G +S +V+ + + S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDEKLKEIFCKYGPALSIRVMTD-DSGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A+R + NG +M E+ L + R ++V +L
Sbjct: 244 AQRAVDEMNGKEMNGKQVYVGRAQKKGERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GLDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|449549395|gb|EMD40360.1| hypothetical protein CERSUDRAFT_110955 [Ceriporiopsis subvermispora
B]
Length = 709
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 118/245 (48%), Gaps = 51/245 (20%)
Query: 85 MEESYIASIFGHTG-EFVSGKVIR-------NKQTNFSEGYGFIEFVSHAAAERVL-QTF 135
M+E Y + G + +S KV R +Q N + GY F+ F S A A VL Q
Sbjct: 1 MDEEYAKQVCTLMGWDPISIKVPRPPPDSVTGQQAN-NPGYCFLTFPSQAHAASVLSQIA 59
Query: 136 NGTQ---MPSTEQNFRLNWAT----------YGAGERRQDDGP---------DFTIFVGD 173
N +Q MP++ + F +NWA+ A + Q P +++IFVGD
Sbjct: 60 NASQPAIMPNSSKPFSMNWASSVPAAPMPASIAAPPQPQITIPGGQNPQYPKEYSIFVGD 119
Query: 174 LAADVTDYVLQETFRAV---------------YSSVKGAKVVTDRTTGRSKGYGFVRFGD 218
LA +V++ L FR + S K AK++ D TG S+GYGFVRF D
Sbjct: 120 LAPEVSNSDLVAVFRNPVLGLRNDREPRFIRPFLSCKSAKIMLDPVTGVSRGYGFVRFTD 179
Query: 219 ESEQLRSMTEMNGVLCSTRPMRIGPAATK----KAATGQQYQKATYQNTQGSQGENDPNN 274
E++Q R++ EM+G+ C +RPMRI PA K A G +Q+ + + G+ + N
Sbjct: 180 EADQQRALIEMHGLYCLSRPMRISPATAKFKPAPNAAGMDFQQFPFVSPTGTGMSDQQNQ 239
Query: 275 TTIFV 279
TI +
Sbjct: 240 MTIAL 244
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
Query: 257 KATYQNTQGSQGE----NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+A N G GE +DP NTT+FVGGL P +++D L+T F +G++ +VK+PAGK C
Sbjct: 367 RAILSNLIGPNGEQLTSSDPYNTTVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPAGKHC 426
Query: 313 GFVQFANR 320
GFVQF +
Sbjct: 427 GFVQFVRK 434
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 71/180 (39%), Gaps = 27/180 (15%)
Query: 40 PVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGH--- 96
P+P + PQP Q T P G P + S+++GDL P + S + ++F +
Sbjct: 86 PMPASIAAPPQP-----QITIPGGQNPQYPKE--YSIFVGDLAPEVSNSDLVAVFRNPVL 138
Query: 97 ------TGEFV-------SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPST 143
F+ S K++ + T S GYGF+ F A +R L +G +
Sbjct: 139 GLRNDREPRFIRPFLSCKSAKIMLDPVTGVSRGYGFVRFTDEADQQRALIEMHG--LYCL 196
Query: 144 EQNFRLNWATYGAGERRQDDGPDFT--IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVT 201
+ R++ AT G DF FV ++D Q T S AK V+
Sbjct: 197 SRPMRISPATAKFKPAPNAAGMDFQQFPFVSPTGTGMSDQQNQMTIALPLPSATQAKSVS 256
>gi|53754|emb|CAA46522.1| poly(A) binding protein [Mus musculus]
Length = 636
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 118/252 (46%), Gaps = 24/252 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SQK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVK 221
Query: 306 I---PAGKRCGF 314
+ +GK GF
Sbjct: 222 VMTDESGKSKGF 233
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|147899475|ref|NP_001085069.1| polyadenylate-binding protein 1-B [Xenopus laevis]
gi|82236793|sp|Q6IP09.1|PABPB_XENLA RecName: Full=Polyadenylate-binding protein 1-B; Short=PABP-1-B;
Short=Poly(A)-binding protein 1-B; Short=xPABP1-B;
AltName: Full=Cytoplasmic poly(A)-binding protein 1-B
gi|47940242|gb|AAH72110.1| MGC79060 protein [Xenopus laevis]
gi|80476254|gb|AAI08463.1| MGC79060 protein [Xenopus laevis]
Length = 633
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 116/252 (46%), Gaps = 24/252 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK FGQYG + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKEWFGQYGAALSVK 221
Query: 306 IPA---GKRCGF 314
+ GK GF
Sbjct: 222 VMTDDHGKSRGF 233
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + FG G +S KV+ + S G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDHGK-SRGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG + E+ L + R ++V +L
Sbjct: 244 AQKAVDDMNGKDLNGKAIFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + S+ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEFTP-FGSITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|149608633|ref|XP_001515603.1| PREDICTED: polyadenylate-binding protein 4 [Ornithorhynchus
anatinus]
Length = 630
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 118/250 (47%), Gaps = 24/250 (9%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
ASS + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F A
Sbjct: 5 ASSYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPAD 64
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
AER L T N + + R+ W+ R+ G +F+ +L + + L +TF
Sbjct: 65 AERALDTMNFDVIKG--KPIRIMWSQRDPSLRKSGVG---NVFIKNLDKSIDNKALYDTF 119
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
A + ++ KVV D SKGY FV F + R++ +MNG+L + R + +G ++
Sbjct: 120 SA-FGNILSCKVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 248 KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI- 306
K + G T +++ + D+ LK +F +YG+ + VK+
Sbjct: 177 K-------------EREAELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVM 223
Query: 307 --PAGKRCGF 314
P+GK GF
Sbjct: 224 TDPSGKSKGF 233
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 94/202 (46%), Gaps = 18/202 (8%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +F G+ +S KV+ + + S+G+GF+ F H
Sbjct: 185 AKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDP-SGKSKGFGFVSFEKHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A + ++ NG + E+ L + R +++ +L
Sbjct: 244 ANQAVEDMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + S+ AKV+ + GRSKG+GFV F E +++TEMNG + +
Sbjct: 304 TIDDEKLRKEF-SPFGSITSAKVMLEE--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 237 RPMRIGPAATK---KAATGQQY 255
+P+ + A K KA QY
Sbjct: 361 KPLYVALAQRKEERKAHLTNQY 382
>gi|432907583|ref|XP_004077665.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 635
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 116/257 (45%), Gaps = 26/257 (10%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--RPLRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG YG + V+
Sbjct: 175 SRK-------------EREAELGARAREFTNVYIKNFGEDMDDEKLKELFGNYGPALSVR 221
Query: 306 IPA-----GKRCGFVQF 317
+ K GFV F
Sbjct: 222 VMTDDTGKSKGFGFVSF 238
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 97/185 (52%), Gaps = 15/185 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+++I + M++ + +FG+ G +S +V+ + T S+G+GF+ F H A++ +
Sbjct: 192 NVYIKNFGEDMDDEKLKELFGNYGPALSVRVMTD-DTGKSKGFGFVSFERHEDAQKAVDD 250
Query: 135 FNGTQMP--------STEQNFRLNWATYGAGERRQDDGPDF---TIFVGDLAADVTDYVL 183
NG ++ + ++ R N + +QD + ++V +L + D L
Sbjct: 251 MNGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERL 310
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T+P+ +
Sbjct: 311 RKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVAL 367
Query: 244 AATKK 248
A K+
Sbjct: 368 AQRKE 372
>gi|302754900|ref|XP_002960874.1| hypothetical protein SELMODRAFT_21095 [Selaginella moellendorffii]
gi|302767436|ref|XP_002967138.1| hypothetical protein SELMODRAFT_10868 [Selaginella moellendorffii]
gi|300165129|gb|EFJ31737.1| hypothetical protein SELMODRAFT_10868 [Selaginella moellendorffii]
gi|300171813|gb|EFJ38413.1| hypothetical protein SELMODRAFT_21095 [Selaginella moellendorffii]
Length = 619
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 126/250 (50%), Gaps = 30/250 (12%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + E+ + +F G+ +S +V R+ T S GY ++ + + A R L+
Sbjct: 5 SLYVGDLDPNVSENQLYDLFNQIGQVLSIRVCRDLMTRRSLGYAYVNYNNVQDATRALEL 64
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ ++ R+ IF+ +L + + L +TF + + ++
Sbjct: 65 LNFT--PVNGKAVRIMFSHRDPSIRKSGTA---NIFIKNLDRAIDNKALHDTFVS-FGNI 118
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV TD + G+SKGYGFV+F E ++ ++NG+L + + + +GP ++ ++
Sbjct: 119 LSCKVATD-SNGQSKGYGFVQFEQEESAQVAIDKVNGMLVAEKQVFVGPFVRRQ----ER 173
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL---VHVKIPAGK- 310
Q + N +FV L S TDD LK VFG +G++ V ++ GK
Sbjct: 174 EQNGKFNN--------------VFVKNLGESTTDDELKEVFGAFGKITSAVVMRDSDGKS 219
Query: 311 RC-GFVQFAN 319
+C GFV F N
Sbjct: 220 KCFGFVNFEN 229
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 85/185 (45%), Gaps = 14/185 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L + + +FG G+ S V+R+ S+ +GF+ F + A + +
Sbjct: 181 NVFVKNLGESTTDDELKEVFGAFGKITSAVVMRDSDGK-SKCFGFVNFENPDEAAKAVVG 239
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG ++ +E+ L + R D +++ +L DV D L
Sbjct: 240 LNGKKIEDKEWYVGRAQKKSEREAELRAKYEQERKERIDRYQGANLYLKNLDDDVDDERL 299
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+E F A + S+ KV+ D G+SKG GFV + E R+ EMNG + ++P+ +
Sbjct: 300 REIF-ADFGSITSCKVMRD-AQGQSKGSGFVAYSAPEEANRATIEMNGKMIGSKPIYVAM 357
Query: 244 AATKK 248
A K+
Sbjct: 358 AQRKE 362
>gi|207080212|ref|NP_001128842.1| polyadenylate-binding protein 1 [Pongo abelii]
gi|75070631|sp|Q5R8F7.1|PABP1_PONAB RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|55730462|emb|CAH91953.1| hypothetical protein [Pongo abelii]
Length = 636
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 117/252 (46%), Gaps = 24/252 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
Query: 306 I---PAGKRCGF 314
+ +GK GF
Sbjct: 222 VMTDESGKSKGF 233
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|27924240|gb|AAH45086.1| Tia1 protein, partial [Xenopus laevis]
Length = 427
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 128/269 (47%), Gaps = 21/269 (7%)
Query: 67 DASSDG-IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG--------- 116
D DG R+L++G+L + E I +F G S K+I + G
Sbjct: 38 DMEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQTDGRRVGASVSFPVMP 97
Query: 117 ------YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIF 170
Y F+EF H A L NG ++ E ++NWAT + +++ D F +F
Sbjct: 98 NANNDPYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVF 154
Query: 171 VGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMN 230
VGDL+ ++T ++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M
Sbjct: 155 VGDLSPEITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMG 213
Query: 231 GVLCSTRPMRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDD 289
G R +R A K A + T Q + ++ N T++ GG+ +++
Sbjct: 214 GQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSSKNCTVYCGGIGAGLSEQ 273
Query: 290 ILKTVFGQYGELVHVKIPAGKRCGFVQFA 318
+++ FG +G+++ +++ K F++F+
Sbjct: 274 LMRQTFGVFGQILEIRVFPEKGYSFIRFS 302
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 77/173 (44%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 153 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 212
Query: 136 NGTQMPSTEQNFRLNWATY-----------GAGERRQDD------GPDFTIFVGDLAADV 178
G + + R NWAT + R +D + T++ G + A +
Sbjct: 213 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSSKNCTVYCGGIGAGL 270
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
++ ++++TF V+ + +V + KGY F+RF ++ +NG
Sbjct: 271 SEQLMRQTF-GVFGQILEIRVFPE------KGYSFIRFSTHDSAAHAIVSVNG 316
>gi|124806145|ref|XP_001350640.1| polyadenylate-binding protein, putative [Plasmodium falciparum 3D7]
gi|23496765|gb|AAN36320.1|AE014847_47 polyadenylate-binding protein, putative [Plasmodium falciparum 3D7]
gi|119352249|gb|ABL63812.1| polyadenylate-binding protein [Plasmodium falciparum]
Length = 875
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 120/248 (48%), Gaps = 27/248 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL + E+ + IF G S +V R+ T S GY ++ + + A AER L T
Sbjct: 17 SLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALDT 76
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T + Q RL W+ R+ G IFV +L + + L +TF +++ ++
Sbjct: 77 LNYTNIKG--QPARLMWSHRDPSLRKSGTG---NIFVKNLDKSIDNKALFDTF-SMFGNI 130
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV TD G+SK YGFV + DE ++ ++NGV ++ + +GP K
Sbjct: 131 LSCKVATDE-FGKSKSYGFVHYEDEESAKEAIEKVNGVQLGSKNVYVGPFIKKS------ 183
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP---AGKR 311
++AT ND T ++V SVT+ L+ +F YGE+ + + ++
Sbjct: 184 -ERAT----------NDTKFTNLYVKNFPDSVTETHLRQLFNPYGEITSMIVKMDNKNRK 232
Query: 312 CGFVQFAN 319
F+ +A+
Sbjct: 233 FCFINYAD 240
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++ +L + D +L+E F + ++ AKV+ D +SKG+GFV F + E +++T
Sbjct: 451 NLYIKNLDDGIDDIMLRELFEP-FGTITSAKVMRDEKE-QSKGFGFVCFASQEEANKAVT 508
Query: 228 EMNGVLCSTRPMRIGPAATKK 248
EM+ + + +P+ +G A ++
Sbjct: 509 EMHLKIINGKPLYVGLAEKRE 529
>gi|378732913|gb|EHY59372.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 779
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 123/263 (46%), Gaps = 25/263 (9%)
Query: 61 PYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFI 120
PY +P ++ SL++G+L P + E+ + +F G+ S +V R+ T S GY ++
Sbjct: 48 PYSASPSTAAQHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYV 107
Query: 121 EFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTD 180
+ + A ER L+ N T + + R+ W+ R+ G +F+ +L A + +
Sbjct: 108 NYNNTADGERALEDLNYTSIKG--RPCRIMWSQRDPALRKTGQG---NVFIKNLDAAIDN 162
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L +TF + + ++ KV D G SKGYGFV + +++ +NG+L + + +
Sbjct: 163 KALHDTF-SQFGNILSCKVAQDE-LGNSKGYGFVHYETAEAANQAIKSVNGMLLNDKKVF 220
Query: 241 IGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGE 300
+G K+ + Q E N T +++ +D SV+D+ +F YGE
Sbjct: 221 VGHHIAKR-------------DRQSKLEEMKANFTNVYIKNIDESVSDEEFTKLFEPYGE 267
Query: 301 LVHVKIP-----AGKRCGFVQFA 318
+V I + GFV FA
Sbjct: 268 VVSATITRDENGKSRGFGFVNFA 290
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 111/245 (45%), Gaps = 13/245 (5%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S KV +++ N S+GYGF+ + +
Sbjct: 141 PALRKTGQGNVFIKNLDAAIDNKALHDTFSQFGNILSCKVAQDELGN-SKGYGFVHYETA 199
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQ 184
AA + +++ NG + + + A + ++ +FT +++ ++ V+D
Sbjct: 200 EAANQAIKSVNGMLLNDKKVFVGHHIAKRDRQSKLEEMKANFTNVYIKNIDESVSDEEFT 259
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
+ F Y V A + D G+S+G+GFV F +++ E+N + + +G A
Sbjct: 260 KLFEP-YGEVVSATITRDEN-GKSRGFGFVNFASHESAAKAVEELNDKEFHGKKLYVGRA 317
Query: 245 ATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
K + +QY+ A + QG N ++V L V DD L+ +F YG +
Sbjct: 318 QKKHEREEELRRQYEAARMEKASKYQGVN------LYVKNLTDDVDDDKLRELFSSYGTI 371
Query: 302 VHVKI 306
K+
Sbjct: 372 TSAKV 376
>gi|70995622|ref|XP_752566.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus fumigatus Af293]
gi|66850201|gb|EAL90528.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus fumigatus Af293]
gi|159131321|gb|EDP56434.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus fumigatus A1163]
Length = 489
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 118/263 (44%), Gaps = 23/263 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G L P + E + IF TG S K+I +K + + ++ + +
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNDTIT---ALLNLMTLVRLRGLCK 147
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
+ S R+NWA ++D F IFVGDL+ +V D +L + F A + S
Sbjct: 148 PSTAVESISRYAEIRVNWAYQSNSANKEDTSSHFHIFVGDLSNEVNDEILLQAFSA-FGS 206
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V A+V+ D TGRS+GYGFV F + ++ +++ M+G +R +R A K +
Sbjct: 207 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALNAMDGEWLGSRAIRCNWANQKGQPSIS 266
Query: 254 QYQKATYQN-------------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDILKTV 294
Q Q T G Q + P TT +VG L P T + L +
Sbjct: 267 QQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLVPL 326
Query: 295 FGQYGELVHVKIPAGKRCGFVQF 317
F +G ++ ++ A + F++
Sbjct: 327 FHNFGYVLETRLQADRGFAFIKM 349
>gi|403213707|emb|CCK68209.1| hypothetical protein KNAG_0A05440 [Kazachstania naganishii CBS
8797]
Length = 442
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 100/181 (55%), Gaps = 7/181 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R L++G+L + E + F G+ V KV+ +K++N+ Y F+E+ A LQ
Sbjct: 79 RVLYVGNLDKSITEDILKQYFQVAGQIVDVKVMIDKKSNYV-NYAFVEYAKAHDASVALQ 137
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG Q+ + + ++N A + + + DD F +FVGDL D+ D L +F+ S
Sbjct: 138 TLNGIQIENNK--VKINRA-FQSQQSTTDDS-TFNLFVGDLNIDIDDDTLSRSFKDFPSY 193
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
++ A V+ D TGRS+GYGFV F D+ + ++M EM G + RP+RI ATK+ Q
Sbjct: 194 IQ-AHVMWDMQTGRSRGYGFVSFADQEQAQKAMEEMQGKELNGRPIRIN-WATKRDNNQQ 251
Query: 254 Q 254
Q
Sbjct: 252 Q 252
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 70/175 (40%), Gaps = 31/175 (17%)
Query: 152 ATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGY 211
AT+G E D ++VG+L +T+ +L++ F+ V + KV+ D+ + Y
Sbjct: 69 ATHGGRETS-----DRVLYVGNLDKSITEDILKQYFQ-VAGQIVDVKVMIDKKSNYV-NY 121
Query: 212 GFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEND 271
FV + + ++ +NG+ ++I A Q Q D
Sbjct: 122 AFVEYAKAHDASVALQTLNGIQIENNKVKINRA------------------FQSQQSTTD 163
Query: 272 PNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANR 320
+ +FVG L+ + DD L F + + + + GFV FA++
Sbjct: 164 DSTFNLFVGDLNIDIDDDTLSRSFKDFPSYIQAHVMWDMQTGRSRGYGFVSFADQ 218
>gi|395731713|ref|XP_002811971.2| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIA-1 isoform p40
[Pongo abelii]
Length = 386
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 128/255 (50%), Gaps = 16/255 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I +T ++ Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIM--ETAGNDPYCFVEFHDDRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVL 183
NG + E ++NWAT + +++ Q F +FVGDL+ ++T +
Sbjct: 65 AMNGRKKMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 303 HVKIPAGKRCGFVQF 317
+++ K FV+F
Sbjct: 242 EIRVFPDKGYSFVRF 256
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 136 NGTQMPSTEQNFRLNWAT---------YGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWAT Y + ++ Q + T++ G + + +
Sbjct: 168 GGQWLGGRQ--IRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGL 225
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 226 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNG 271
>gi|9930616|gb|AAG02117.1|AF293840_1 poly(A) binding protein [Arabidopsis thaliana]
Length = 660
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 130/282 (46%), Gaps = 28/282 (9%)
Query: 41 VPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEF 100
VP P T VP P VA + SL+ GDL P + E+++ +F H
Sbjct: 18 VPSPTAQTSVQVPVSIPLPSPVVVADQTHPNS--SLYAGDLDPKVTEAHLFDLFKHVANV 75
Query: 101 VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR 160
VS +V R+ Q S GY +I F + A R ++ N T P ++ R+ + R
Sbjct: 76 VSVRVCRD-QNRRSLGYAYINFSNPNDAYRAMEALNYT--PLFDRPIRIMLSNRDPSTRL 132
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
G IF+ +L A + + L ETF + + ++ KV D TGRSKGYGFV+F E
Sbjct: 133 SGKG---NIFIKNLDASIDNKALFETFSS-FGTILSCKVAMD-VTGRSKGYGFVQFEKEE 187
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
++ ++NG+L + + + +G ++ ++A +NT P T ++V
Sbjct: 188 SAQAAIDKLNGMLMNDKQVFVGHFIRRQ-------ERARDENTP------TPRFTNVYVK 234
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKI----PAGKRC-GFVQF 317
L + +D L+ FG++G + + RC GFV F
Sbjct: 235 NLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNF 276
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 18/187 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L + E + FG G S V+R++ N S +GF+ F AA ++
Sbjct: 230 NVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGN-SRCFGFVNFECTEAAASAVEK 288
Query: 135 FNGTQM-------------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDY 181
NG + E+ R + + G + +++ +L V D
Sbjct: 289 MNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGAN--LYLKNLDDSVDDE 346
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
L+E F + Y +V +KV+ + G S+G+GFV + + E LR+++EMNG + +P+ I
Sbjct: 347 KLKEMF-SEYGNVTSSKVMLN-PQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYI 404
Query: 242 GPAATKK 248
A K+
Sbjct: 405 ALAQRKE 411
>gi|197097606|ref|NP_001126097.1| polyadenylate-binding protein 1 [Pongo abelii]
gi|55730342|emb|CAH91893.1| hypothetical protein [Pongo abelii]
Length = 636
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 117/252 (46%), Gaps = 24/252 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDIKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
Query: 306 I---PAGKRCGF 314
+ +GK GF
Sbjct: 222 VMTDESGKSKGF 233
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRVVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|15219945|ref|NP_173690.1| Polyadenylate-binding protein 3 [Arabidopsis thaliana]
gi|12643628|sp|O64380.1|PABP3_ARATH RecName: Full=Polyadenylate-binding protein 3; Short=PABP-3;
Short=Poly(A)-binding protein 3
gi|2505869|emb|CAA72907.1| polyA binding protein PAB3 [Arabidopsis thaliana]
gi|15450820|gb|AAK96681.1| Strong similarity to poly(A)-binding protein (PABP5) [Arabidopsis
thaliana]
gi|332192163|gb|AEE30284.1| Polyadenylate-binding protein 3 [Arabidopsis thaliana]
Length = 660
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 130/282 (46%), Gaps = 28/282 (9%)
Query: 41 VPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEF 100
VP P T VP P VA + SL+ GDL P + E+++ +F H
Sbjct: 18 VPSPTAQTSVQVPVSIPLPSPVVVADQTHPNS--SLYAGDLDPKVTEAHLFDLFKHVANV 75
Query: 101 VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR 160
VS +V R+ Q S GY +I F + A R ++ N T P ++ R+ + R
Sbjct: 76 VSVRVCRD-QNRRSLGYAYINFSNPNDAYRAMEALNYT--PLFDRPIRIMLSNRDPSTRL 132
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
G IF+ +L A + + L ETF + + ++ KV D TGRSKGYGFV+F E
Sbjct: 133 SGKG---NIFIKNLDASIDNKALFETFSS-FGTILSCKVAMD-VTGRSKGYGFVQFEKEE 187
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
++ ++NG+L + + + +G ++ ++A +NT P T ++V
Sbjct: 188 SAQAAIDKLNGMLMNDKQVFVGHFIRRQ-------ERARDENTP------TPRFTNVYVK 234
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKI----PAGKRC-GFVQF 317
L + +D L+ FG++G + + RC GFV F
Sbjct: 235 NLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNF 276
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 18/187 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L + E + FG G S V+R++ N S +GF+ F AA ++
Sbjct: 230 NVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGN-SRCFGFVNFECTEAAASAVEK 288
Query: 135 FNGTQM-------------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDY 181
NG + E+ R + + G + +++ +L V D
Sbjct: 289 MNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGAN--LYLKNLDDSVDDE 346
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
L+E F + Y +V +KV+ + G S+G+GFV + + E LR+++EMNG + +P+ I
Sbjct: 347 KLKEMF-SEYGNVTSSKVMLN-PQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYI 404
Query: 242 GPAATKK 248
A K+
Sbjct: 405 ALAQRKE 411
>gi|413918857|gb|AFW58789.1| hypothetical protein ZEAMMB73_983608 [Zea mays]
Length = 412
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 119/250 (47%), Gaps = 27/250 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL+ + +S + +F G+ VS +V R+ + S GY ++ + + A R L+
Sbjct: 35 SLYVGDLEGAVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNYSNPLDAARALEV 94
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + + R+ ++ RR IF+ +L + + L ETF + + ++
Sbjct: 95 LNFAAL--NNKPIRVMYSNRDPSSRRSGSA---NIFIKNLDKTIDNKTLHETFSS-FGTI 148
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV D G+SKG+GFV++ E ++ +NG+L + +P+ +GP +K
Sbjct: 149 LSCKVAVDE-AGQSKGFGFVQYDKEEAAQNAIKSLNGMLINDKPVFVGP-FVRKQERDHS 206
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL----VHVKIPAGK 310
+ K + N +FV L S T + L +FG+YG++ V + +
Sbjct: 207 FDKTKFNN--------------VFVKNLSESTTKEDLLKIFGEYGDITSAVVMIGMDGKS 252
Query: 311 RC-GFVQFAN 319
RC GF+ F N
Sbjct: 253 RCFGFINFEN 262
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 14/185 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L + + IFG G+ S V+ S +GFI F + AA +Q
Sbjct: 214 NVFVKNLSESTTKEDLLKIFGEYGDITSAVVMIGMDGK-SRCFGFINFENPDAASHAVQE 272
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG ++ +E+ L + + D +++ +L + D L
Sbjct: 273 LNGKKINDKEWYVGRAQKKSEREMELKRRFEQSLKDAADKYQGLNLYLKNLDDSIGDDQL 332
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
E F + + + KV+ D+ G SKG GFV F E +++TEMNG + S +P+ +
Sbjct: 333 CELF-SNFGKITSYKVMRDQN-GLSKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAF 390
Query: 244 AATKK 248
A K+
Sbjct: 391 AQRKE 395
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 67/158 (42%), Gaps = 25/158 (15%)
Query: 165 PDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLR 224
P +++VGDL V+D L E F V +V D T+ RS GY +V + + + R
Sbjct: 32 PTTSLYVGDLEGAVSDSQLYELFSQA-GQVVSVRVCRDVTSRRSLGYAYVNYSNPLDAAR 90
Query: 225 SMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDP 284
++ +N + +P+R+ Y N S + N IF+ LD
Sbjct: 91 ALEVLNFAALNNKPIRV-----------------MYSNRDPSSRRSGSAN--IFIKNLDK 131
Query: 285 SVTDDILKTVFGQYGELVHVKIPA-----GKRCGFVQF 317
++ + L F +G ++ K+ K GFVQ+
Sbjct: 132 TIDNKTLHETFSSFGTILSCKVAVDEAGQSKGFGFVQY 169
>gi|3287682|gb|AAC25510.1| Strong similarity to gb|M97657 poly(A)-binding protein (PABP5) from
A. thaliana [Arabidopsis thaliana]
Length = 655
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 130/282 (46%), Gaps = 28/282 (9%)
Query: 41 VPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEF 100
VP P T VP P VA + SL+ GDL P + E+++ +F H
Sbjct: 18 VPSPTAQTSVQVPVSIPLPSPVVVADQTHPNS--SLYAGDLDPKVTEAHLFDLFKHVANV 75
Query: 101 VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR 160
VS +V R+ Q S GY +I F + A R ++ N T P ++ R+ + R
Sbjct: 76 VSVRVCRD-QNRRSLGYAYINFSNPNDAYRAMEALNYT--PLFDRPIRIMLSNRDPSTRL 132
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
G IF+ +L A + + L ETF + + ++ KV D TGRSKGYGFV+F E
Sbjct: 133 SGKG---NIFIKNLDASIDNKALFETFSS-FGTILSCKVAMD-VTGRSKGYGFVQFEKEE 187
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
++ ++NG+L + + + +G ++ ++A +NT P T ++V
Sbjct: 188 SAQAAIDKLNGMLMNDKQVFVGHFIRRQ-------ERARDENTP------TPRFTNVYVK 234
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKI----PAGKRC-GFVQF 317
L + +D L+ FG++G + + RC GFV F
Sbjct: 235 NLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNF 276
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 18/187 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L + E + FG G S V+R++ N S +GF+ F AA ++
Sbjct: 230 NVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGN-SRCFGFVNFECTEAAASAVEK 288
Query: 135 FNGTQM-------------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDY 181
NG + E+ R + + G + +++ +L V D
Sbjct: 289 MNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGAN--LYLKNLDDSVDDE 346
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
L+E F + Y +V +KV+ + G S+G+GFV + + E LR+++EMNG + +P+ I
Sbjct: 347 KLKEMF-SEYGNVTSSKVMLN-PQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYI 404
Query: 242 GPAATKK 248
A K+
Sbjct: 405 ALAQRKE 411
>gi|254579785|ref|XP_002495878.1| ZYRO0C05060p [Zygosaccharomyces rouxii]
gi|238938769|emb|CAR26945.1| ZYRO0C05060p [Zygosaccharomyces rouxii]
Length = 716
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 89/167 (53%), Gaps = 23/167 (13%)
Query: 116 GYGFIEFVSHAAAERVLQTFNGTQMP-------------STEQNFRLNWATYGAGERRQD 162
GY F+EF + A+ L + N T +P + ++NFRLNWA+ +
Sbjct: 159 GYCFVEFETQQDAQFGL-SLNSTPLPNFISQSSGLATNPTGQRNFRLNWASGATLQSSIP 217
Query: 163 DGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
P+F++FVGDL+ T+ L F+ + SVK +V+TD TG S+ +GFVRFG+E E+
Sbjct: 218 SRPEFSLFVGDLSPTATEADLLSLFQQKFKSVKTVRVMTDPITGASRCFGFVRFGNEEER 277
Query: 223 LRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGE 269
R++ EMNGV C R +R+ A + Q QG+QG+
Sbjct: 278 RRALVEMNGVWCQGRCLRVAYATPRNNMMWQ---------VQGAQGQ 315
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 38/50 (76%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DPNNTT+F+GGL P + ++ L+T+F +G ++ VKIP GK CGFV+F R
Sbjct: 417 DPNNTTVFIGGLTPKINENQLQTLFSPFGNILTVKIPQGKNCGFVKFEKR 466
>gi|13560783|gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]
Length = 658
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 122/250 (48%), Gaps = 27/250 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL + +S + +F G+ VS +V R+ T S GYG++ + + A R +
Sbjct: 41 SLYVGDLDQSVTDSQLYDLFNQVGQVVSVRVCRDLSTGRSLGYGYVNYSNQQDATRAIDV 100
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R++ + +R+ G IF+ +L + L ETF + + ++
Sbjct: 101 LNFT--PLNNKTIRVSVSRRDPTDRKSGAG---NIFIKNLDKSIDIKALHETFSS-FGTI 154
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
K+ TD +G+SKGYGFV++ E ++ ++NG+L + + + +G +K +
Sbjct: 155 ISCKIATD-ASGQSKGYGFVQYDSEEAAQTAIDKLNGMLMNDKQVYVG-VFLRKQDRDSE 212
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGK- 310
K + N I+V L S ++D L+ FG+YG + V + GK
Sbjct: 213 MSKTKFNN--------------IYVKNLSDSTSEDDLRKTFGEYGTITSVVVMRDADGKS 258
Query: 311 RC-GFVQFAN 319
+C GFV F N
Sbjct: 259 KCFGFVNFEN 268
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 84/193 (43%), Gaps = 14/193 (7%)
Query: 67 DASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHA 126
+ S ++++ +L E + FG G S V+R+ S+ +GF+ F +
Sbjct: 212 EMSKTKFNNIYVKNLSDSTSEDDLRKTFGEYGTITSVVVMRDADGK-SKCFGFVNFENPE 270
Query: 127 AAERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLA 175
A + + NG + +E+ L + + D ++V +L
Sbjct: 271 DAAKAVDALNGKKFDDKEWYVGKAQKKSEREVELKSRFEQTVKEQVDKYQGVNLYVKNLD 330
Query: 176 ADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCS 235
+ D L+E F + Y ++ KV+ D +G S+G GFV F E R++ EMNG +
Sbjct: 331 DTIDDEKLKELF-SEYGTITSCKVMRD-PSGISRGSGFVAFSTPEEASRALGEMNGKMIV 388
Query: 236 TRPMRIGPAATKK 248
++P+ + A K+
Sbjct: 389 SKPLYVALAQRKE 401
>gi|225713880|gb|ACO12786.1| Nucleolysin TIAR [Lepeophtheirus salmonis]
Length = 352
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 124/264 (46%), Gaps = 17/264 (6%)
Query: 67 DASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHA 126
+ DG R+L++G+L + E + ++FG G K+IR S+ Y F+EF A
Sbjct: 4 ECLEDGPRTLYVGNLDVAVTEDLVLALFGQLGAVKGCKIIREGA---SDPYCFVEFAHPA 60
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWATYGAGER---------RQDDGPDFTIFVGDLAAD 177
+A L N E ++NWA+ G + D IFVGDL+ D
Sbjct: 61 SAAAALTAMNKRICLGKE--MKVNWASSPGGSSDSVVHHNLPKPDTSQHHHIFVGDLSPD 118
Query: 178 VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTR 237
+T L+ F + + KVV D T +SKGYGFV F ++++ ++ +MNG +R
Sbjct: 119 ITTETLKNVF-VPFGEISDYKVVKDMLTNKSKGYGFVSFVEKNDAQTAIEQMNGQWLGSR 177
Query: 238 PMRIGPAATK-KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFG 296
+R AA K A + N + + P N T++ GGL S ++I++ F
Sbjct: 178 AIRTNWAARKPPAPYSKDTSNVNKLNFEDVYRQASPRNFTVYCGGLINS-DENIIRQTFS 236
Query: 297 QYGELVHVKIPAGKRCGFVQFANR 320
+G ++ ++ K FV+F N+
Sbjct: 237 PFGRILEIRYFRDKGYAFVRFDNK 260
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 45 VGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGK 104
V W P PD S +++GDL P + + ++F GE K
Sbjct: 81 VNWASSPGGSSDSVVHHNLPKPDTSQH--HHIFVGDLSPDITTETLKNVFVPFGEISDYK 138
Query: 105 VIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWAT------YGAGE 158
V+++ TN S+GYGF+ FV A+ ++ NG + S + R NWA Y
Sbjct: 139 VVKDMLTNKSKGYGFVSFVEKNDAQTAIEQMNGQWLGS--RAIRTNWAARKPPAPYSKDT 196
Query: 159 R-----------RQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGR 207
RQ +FT++ G L + + ++++TF +++ R R
Sbjct: 197 SNVNKLNFEDVYRQASPRNFTVYCGGL-INSDENIIRQTFSPF------GRILEIRYF-R 248
Query: 208 SKGYGFVRFGDESEQLRSMTEMNG 231
KGY FVRF ++ ++ ++G
Sbjct: 249 DKGYAFVRFDNKESACNAIVALHG 272
>gi|50289655|ref|XP_447259.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526568|emb|CAG60192.1| unnamed protein product [Candida glabrata]
Length = 416
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 99/197 (50%), Gaps = 11/197 (5%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R L++G+L + E + F G + K+I + + + Y F+E++ A LQ
Sbjct: 58 RVLYVGNLDKSITEDLLKQYFQAGGPIQNVKIIEDMKNEYV-NYAFVEYIRSHDANVALQ 116
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG Q+ + + ++NWA DD F +FVGDL DV D L TFR +
Sbjct: 117 TLNGVQLEN--KTLKINWAFETQQAAENDD--TFNLFVGDLNVDVDDETLAGTFREFPTF 172
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
++ A V+ D TGRS+GYGFV F ++ E ++M M G S R +RI A ++ G
Sbjct: 173 IQ-AHVMWDMQTGRSRGYGFVSFSNQEEAQKAMDAMQGKDLSGRQIRINWATKRERNMGN 231
Query: 254 QYQKATYQNTQGSQGEN 270
+ N +GS+G N
Sbjct: 232 -----NFGNNRGSRGGN 243
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A +D +L++GDL +++ +A F F+ V+ + QT S GYGF+ F +
Sbjct: 140 AENDDTFNLFVGDLNVDVDDETLAGTFREFPTFIQAHVMWDMQTGRSRGYGFVSFSNQEE 199
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDF 167
A++ + G + + R+NWAT +R ++ G +F
Sbjct: 200 AQKAMDAMQGKDLSGRQ--IRINWAT----KRERNMGNNF 233
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 28/162 (17%)
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
D ++VG+L +T+ +L++ F+A ++ K++ D Y FV + + +
Sbjct: 57 DRVLYVGNLDKSITEDLLKQYFQA-GGPIQNVKIIED-MKNEYVNYAFVEYIRSHDANVA 114
Query: 226 MTEMNGVLCSTRPMRIGPA-ATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDP 284
+ +NGV + ++I A T++AA END + +FVG L+
Sbjct: 115 LQTLNGVQLENKTLKINWAFETQQAA------------------END-DTFNLFVGDLNV 155
Query: 285 SVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANR 320
V D+ L F ++ + + + GFV F+N+
Sbjct: 156 DVDDETLAGTFREFPTFIQAHVMWDMQTGRSRGYGFVSFSNQ 197
>gi|320581683|gb|EFW95902.1| Poly(A) binding protein [Ogataea parapolymorpha DL-1]
Length = 629
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 122/250 (48%), Gaps = 25/250 (10%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
+S+ + SL++G+L P + ES + +F G+ + +V R+ + S GY ++ F SHA
Sbjct: 42 NSETLASLYVGELDPSVTESDLFEVFSPIGQVSTIRVCRDAVSKQSLGYAYVNFQSHADG 101
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
E+ L+ N T P + R+ W+ RR G IF+ +L + + L +TF
Sbjct: 102 EKALEELNYT--PIKGKACRIMWSQRDPSLRRNGSG---NIFIKNLHPAIDNKTLHDTFS 156
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE-MNGVLCSTRPMRIGPAATK 247
A + + K+ TD G SKG+GFV + +ESE ++ E +NG+L + + +GP K
Sbjct: 157 A-FGKILSCKIATDE-NGNSKGFGFVHY-EESESAKAAIENVNGMLLNDHEVYVGPHLAK 213
Query: 248 KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHV--- 304
K + Q E N T ++V ++ + +D L+ F +G + +
Sbjct: 214 K-------------DRQSKMRELIANFTNVYVKNINLNWDEDKLRETFSPFGTISSIFLS 260
Query: 305 KIPAGKRCGF 314
K +GK GF
Sbjct: 261 KDESGKSRGF 270
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 121/256 (47%), Gaps = 16/256 (6%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P +G +++I +L P ++ + F G+ +S K+ ++ N S+G+GF+ +
Sbjct: 127 PSLRRNGSGNIFIKNLHPAIDNKTLHDTFSAFGKILSCKIATDENGN-SKGFGFVHYEES 185
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQ 184
+A+ ++ NG + E + A + ++ +FT ++V ++ + + L+
Sbjct: 186 ESAKAAIENVNGMLLNDHEVYVGPHLAKKDRQSKMRELIANFTNVYVKNINLNWDEDKLR 245
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
ETF + + ++ + D + G+S+G+GFV F + ++++ E+N + + +G A
Sbjct: 246 ETF-SPFGTISSIFLSKDES-GKSRGFGFVNFEKHEDAVKAVEELNNKDIDGQKLYVGRA 303
Query: 245 ATKKA---ATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
K + QY+ A + QG N +FV LD S+ D L+ F YG +
Sbjct: 304 QKKSERMESLKHQYEAARQEQLNKYQGYN------LFVKNLDDSIDDAKLEEEFKPYGTI 357
Query: 302 VHVKI---PAGKRCGF 314
K+ AGK GF
Sbjct: 358 TSAKVMLDDAGKSKGF 373
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 91/199 (45%), Gaps = 14/199 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ ++ +E + F G +S + ++ S G+GF+ F H A + ++
Sbjct: 229 NVYVKNINLNWDEDKLRETFSPFGT-ISSIFLSKDESGKSRGFGFVNFEKHEDAVKAVEE 287
Query: 135 FN-----------GTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
N G +E+ L A + + + + +FV +L + D L
Sbjct: 288 LNNKDIDGQKLYVGRAQKKSERMESLKHQYEAARQEQLNKYQGYNLFVKNLDDSIDDAKL 347
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+E F+ Y ++ AKV+ D G+SKG+GFV + E +++TEM+ + + +P+ +
Sbjct: 348 EEEFKP-YGTITSAKVMLD-DAGKSKGFGFVCYSSPEEATKAITEMHQRMVAGKPLYVAL 405
Query: 244 AATKKAATGQQYQKATYQN 262
A K+ Q Q+ +N
Sbjct: 406 AQRKEVRRSQLSQQIQARN 424
>gi|324507975|gb|ADY43373.1| Nucleolysin TIAR [Ascaris suum]
Length = 290
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 99/176 (56%), Gaps = 6/176 (3%)
Query: 144 EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDR 203
++ ++NWAT + + D F +F+GDL+ +V + L++ F A + V AKV+ D
Sbjct: 8 DREMKVNWATEPGSQAKVDTSKHFHVFIGDLSPEVDNKALKDAF-APFGEVSDAKVIRDS 66
Query: 204 TTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT-GQQYQ-KATYQ 261
TT +SKGYGFV + E R++ +MNG R +R A K T GQQ + + +Y
Sbjct: 67 TTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPTGTDGQQSKPELSYD 126
Query: 262 NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
+ G P+NT++++G ++ SV D+ L+ F ++G +V V+I + FV+F
Sbjct: 127 DVFNQTG---PDNTSVYIGNVNQSVNDEDLRAAFDKFGRIVEVRIFKTQGFAFVRF 179
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 24/212 (11%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
++IGDL P ++ + F GE KVIR+ T S+GYGF+ + AER ++
Sbjct: 33 VFIGDLSPEVDNKALKDAFAPFGEVSDAKVIRDSTTLKSKGYGFVSYPKREEAERAIEQM 92
Query: 136 NGTQMPSTEQNFRLNWATY---------GAGERRQDD-----GPDFT-IFVGDLAADVTD 180
NG + + R NWAT E DD GPD T +++G++ V D
Sbjct: 93 NGQWLG--RRTIRTNWATRKPTGTDGQQSKPELSYDDVFNQTGPDNTSVYIGNVNQSVND 150
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
E RA + K ++V R +++G+ FVRF + ++ +MNG + ++
Sbjct: 151 ----EDLRAAFD--KFGRIVEVRIF-KTQGFAFVRFDKKDSACNAIVKMNGTEIGGQTVK 203
Query: 241 IGPAATKKAATGQQYQKATYQNTQGSQGENDP 272
T + QQ A Y QG+ G P
Sbjct: 204 CSWGRTPEGHNNQQNAAANYNQMQGAYGAYGP 235
>gi|400234898|gb|AFP74112.1| poly-A binding protein, partial [Nicotiana benthamiana]
Length = 643
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 126/252 (50%), Gaps = 27/252 (10%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+ SL++GDL + +S + +F G+ VS +V R+ + S GYG++ + + A R L
Sbjct: 26 VTSLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAARAL 85
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
+ N T P + R+ ++ RR +G IF+ +L + L +TF A +
Sbjct: 86 EVLNFT--PLHGKPIRIMYSNRDPTIRRSGNG---NIFIKNLDKAIDHKALHDTFSA-FG 139
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
++ KV D ++G+SKGYGFV++ + +++ ++NG+L + + + +GP K
Sbjct: 140 NILSCKVAVD-SSGQSKGYGFVQYDSDEAAQKAIEKLNGMLLNDKQVYVGPFVRK----- 193
Query: 253 QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA---G 309
Q + T+ T +FV L S ++ L+ +FG++G + V + G
Sbjct: 194 -QERDMAVDKTR---------FTNVFVKNLSESTLEEELRKIFGEFGTITSVAVMKDEDG 243
Query: 310 K-RC-GFVQFAN 319
K RC GFV F N
Sbjct: 244 KSRCFGFVNFEN 255
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 123/264 (46%), Gaps = 24/264 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S KV + S+GYGF+++ S
Sbjct: 107 PTIRRSGNGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVAVDSSGQ-SKGYGFVQYDSD 165
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
AA++ ++ NG + N + + ++ +D D T F ++++ L+E
Sbjct: 166 EAAQKAIEKLNGMLL-----NDKQVYVGPFVRKQERDMAVDKTRFTNVFVKNLSESTLEE 220
Query: 186 TFRAVYS---SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
R ++ ++ V+ D G+S+ +GFV F + + R++ +NG + +G
Sbjct: 221 ELRKIFGEFGTITSVAVMKDED-GKSRCFGFVNFENAEDAARAVEALNGYKLDNKDWFVG 279
Query: 243 PAATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
A K + +++++ + SQG N +++ LD S++DD LK +F YG
Sbjct: 280 RAQKKSEREMELKHRFEQSAQEAVDKSQGLN------LYLKNLDDSISDDKLKELFSPYG 333
Query: 300 ELVHVKI---PAG--KRCGFVQFA 318
+ K+ P+G K GFV F+
Sbjct: 334 TITSCKVMRDPSGVSKGSGFVAFS 357
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 92/195 (47%), Gaps = 16/195 (8%)
Query: 67 DASSDGIR--SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVS 124
D + D R ++++ +L E + IFG G S V++++ S +GF+ F +
Sbjct: 197 DMAVDKTRFTNVFVKNLSESTLEEELRKIFGEFGTITSVAVMKDEDGK-SRCFGFVNFEN 255
Query: 125 HAAAERVLQTFNGTQMPS-----------TEQNFRLNWATYGAGERRQDDGPDFTIFVGD 173
A R ++ NG ++ + +E+ L + + D +++ +
Sbjct: 256 AEDAARAVEALNGYKLDNKDWFVGRAQKKSEREMELKHRFEQSAQEAVDKSQGLNLYLKN 315
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
L ++D L+E F + Y ++ KV+ D +G SKG GFV F E R+++EMNG +
Sbjct: 316 LDDSISDDKLKELF-SPYGTITSCKVMRD-PSGVSKGSGFVAFSTPEEASRALSEMNGKM 373
Query: 234 CSTRPMRIGPAATKK 248
++P+ + A K+
Sbjct: 374 VVSKPLYVALAQRKE 388
>gi|383417507|gb|AFH31967.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|383417511|gb|AFH31969.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 459
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 118/252 (46%), Gaps = 24/252 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
Query: 306 I---PAGKRCGF 314
+ +GK GF
Sbjct: 222 VMTDESGKSKGF 233
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 92/185 (49%), Gaps = 15/185 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H A++ +
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E+ L + R ++V +L + D L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T+P+ +
Sbjct: 311 RKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVAL 367
Query: 244 AATKK 248
A K+
Sbjct: 368 AQRKE 372
>gi|449268618|gb|EMC79472.1| Polyadenylate-binding protein 4 [Columba livia]
Length = 630
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 117/250 (46%), Gaps = 24/250 (9%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
ASS + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F A
Sbjct: 5 ASSYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPAD 64
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
AER L T N + + R+ W+ R+ G +F+ +L + + L +TF
Sbjct: 65 AERALDTMNFDVIKG--KPIRIMWSQRDPSLRKSGVG---NVFIKNLDKSIDNKALYDTF 119
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
A + ++ KVV D SKGY FV F + R++ +MNG+L + R + +G ++
Sbjct: 120 SA-FGNILSCKVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 248 KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI- 306
K + G T +++ + D+ LK +F +YG+ + VK+
Sbjct: 177 K-------------EREAELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVM 223
Query: 307 --PAGKRCGF 314
P GK GF
Sbjct: 224 TDPTGKSKGF 233
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 94/202 (46%), Gaps = 18/202 (8%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +F G+ +S KV+ + T S+G+GF+ F H
Sbjct: 185 AKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDP-TGKSKGFGFVSFEKHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A + ++ NG + E+ L + R +++ +L
Sbjct: 244 ANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERLSRYQGVNLYIKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +
Sbjct: 304 TIDDEKLRKEF-SPFGAITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 237 RPMRIGPAATK---KAATGQQY 255
+P+ + A K KA QY
Sbjct: 361 KPLYVALAQRKEERKAHLTNQY 382
>gi|291408594|ref|XP_002720593.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Oryctolagus cuniculus]
Length = 636
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 117/252 (46%), Gaps = 24/252 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ + G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLHKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
Query: 306 I---PAGKRCGF 314
+ +GK GF
Sbjct: 222 VMTDESGKSKGF 233
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|389629168|ref|XP_003712237.1| polyadenylate-binding protein [Magnaporthe oryzae 70-15]
gi|158514092|sp|A4QUF0.1|PABP_MAGO7 RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|351644569|gb|EHA52430.1| polyadenylate-binding protein [Magnaporthe oryzae 70-15]
gi|440469069|gb|ELQ38192.1| polyadenylate-binding protein [Magnaporthe oryzae Y34]
gi|440487573|gb|ELQ67355.1| polyadenylate-binding protein [Magnaporthe oryzae P131]
Length = 762
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 116/244 (47%), Gaps = 24/244 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++G+L P + E+ + +F G S +V R+ T S GY ++ + + A E+ L+
Sbjct: 62 SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALEE 121
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T + + R+ W+ R+ G +F+ +L + + L +TF A + ++
Sbjct: 122 LNYTLIKG--RPCRIMWSQRDPALRKTGQG---NVFIKNLDVAIDNKALHDTF-AAFGNI 175
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV D G SKGYGFV + + +++ +NG+L + + + +G KK
Sbjct: 176 LSCKVAQDE-NGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKK------ 228
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP----AGK 310
+ Q E N T I+V ++P VTDD +T+F +YG++ + GK
Sbjct: 229 -------DRQSKFDEMKANFTNIYVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGK 281
Query: 311 RCGF 314
GF
Sbjct: 282 SRGF 285
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 113/245 (46%), Gaps = 12/245 (4%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S KV +++ N S+GYGF+ + +
Sbjct: 141 PALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGN-SKGYGFVHYETD 199
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQ 184
AA + ++ NG + + + + + +FT I+V ++ +VTD +
Sbjct: 200 EAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFDEMKANFTNIYVKNINPEVTDDEFR 259
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
F Y V + + D+ TG+S+G+GFV F + +++ E+N + + +G A
Sbjct: 260 TLFEK-YGDVTSSSLARDQETGKSRGFGFVNFTSHEDASKAVQELNEKEFHGQNLYVGRA 318
Query: 245 ATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
K + + Y+ A + QG N +++ LD V D+ L+ +F ++G +
Sbjct: 319 QKKHEREEELRKSYEAARQEKASKYQGVN------LYIKNLDDEVDDEKLRQLFSEFGPI 372
Query: 302 VHVKI 306
K+
Sbjct: 373 TSAKV 377
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 64/142 (45%), Gaps = 12/142 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ ++ P + + ++F G+ S + R+++T S G+GF+ F SH A + +Q
Sbjct: 243 NIYVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKSRGFGFVNFTSHEDASKAVQE 302
Query: 135 FN-----------GTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
N G E+ L + A + + +++ +L +V D L
Sbjct: 303 LNEKEFHGQNLYVGRAQKKHEREEELRKSYEAARQEKASKYQGVNLYIKNLDDEVDDEKL 362
Query: 184 QETFRAVYSSVKGAKVVTDRTT 205
++ F + + + AKV+ D T
Sbjct: 363 RQLF-SEFGPITSAKVMRDSIT 383
>gi|348529271|ref|XP_003452137.1| PREDICTED: polyadenylate-binding protein 1-like [Oreochromis
niloticus]
Length = 635
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 116/252 (46%), Gaps = 24/252 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--RPLRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +F +YG + ++
Sbjct: 175 SRK-------------EREAELGARAREFTNVYIKNFGEDMDDEKLKELFSKYGPALSIR 221
Query: 306 I---PAGKRCGF 314
+ +GK GF
Sbjct: 222 VMTDESGKSKGF 233
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 96/185 (51%), Gaps = 15/185 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+++I + M++ + +F G +S +V+ + ++ S+G+GF+ F H A++ +
Sbjct: 192 NVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTD-ESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 135 FNGTQMP--------STEQNFRLNWATYGAGERRQDDGPDF---TIFVGDLAADVTDYVL 183
NG ++ + ++ R N + +QD + ++V +L + D L
Sbjct: 251 MNGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERL 310
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T+P+ +
Sbjct: 311 RKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVAL 367
Query: 244 AATKK 248
A K+
Sbjct: 368 AQRKE 372
>gi|326503608|dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 116/248 (46%), Gaps = 27/248 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL+ + +S + +F G+ VS +V R+ + S GY ++ + + A R ++
Sbjct: 123 SLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAARAMEA 182
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N P + R+ ++ RR IF+ +L + + L +TF A + ++
Sbjct: 183 LNFA--PLNNKPIRVMYSNRDPSSRRSGSA---NIFIKNLDKTIDNKTLHDTFSA-FGAI 236
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV D G+SKG+GFV++ E +M +NG+L + +P+ +GP +K
Sbjct: 237 LSCKVAMD-DIGQSKGFGFVQYEKEESAQSAMKSLNGMLINDKPVYVGP-FLRKQERDNS 294
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL----VHVKIPAGK 310
KA + N +FV L S T + L VF +YG + V + +
Sbjct: 295 SDKAKFNN--------------VFVKNLSESTTKEDLIKVFSEYGTITSAVVMIGMDGKS 340
Query: 311 RC-GFVQF 317
RC GFV F
Sbjct: 341 RCFGFVNF 348
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 71/167 (42%), Gaps = 25/167 (14%)
Query: 156 AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVR 215
AG Q P +++VGDL A+VTD L E F V +V D + RS GY +V
Sbjct: 111 AGGAAQQPLPTTSLYVGDLEANVTDSQLYELFSQA-GQVVSVRVCRDVNSRRSLGYAYVN 169
Query: 216 FGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNT 275
+ + + R+M +N + +P+R+ Y N S + N
Sbjct: 170 YSNPMDAARAMEALNFAPLNNKPIRV-----------------MYSNRDPSSRRSGSAN- 211
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA-----GKRCGFVQF 317
IF+ LD ++ + L F +G ++ K+ K GFVQ+
Sbjct: 212 -IFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMDDIGQSKGFGFVQY 257
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 28/201 (13%)
Query: 67 DASSDGIR--SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVS 124
D SSD + ++++ +L + + +F G S V+ S +GF+ F S
Sbjct: 292 DNSSDKAKFNNVFVKNLSESTTKEDLIKVFSEYGTITSAVVMIGMDGK-SRCFGFVNFES 350
Query: 125 HAAAERVLQTFNGTQMPSTEQNFRLNWATYGA---GERRQDDGPDF-------------- 167
A R ++ NG ++ E W A ER D F
Sbjct: 351 PDDAARAVEELNGKKINDKE------WYVGRAQKKSEREMDLKRRFEQSMKDAADKYQGQ 404
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++ +L +TD L+E F + + + K++ D+ G SKG GFV F E +++T
Sbjct: 405 NLYLKNLDDGITDDQLRELF-SNFGKITSCKIMRDQN-GVSKGSGFVSFSTREEASQALT 462
Query: 228 EMNGVLCSTRPMRIGPAATKK 248
EMNG + S +P+ + A K+
Sbjct: 463 EMNGKMISGKPLYVAFAQRKE 483
>gi|413956150|gb|AFW88799.1| hypothetical protein ZEAMMB73_294352 [Zea mays]
Length = 735
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 115/249 (46%), Gaps = 28/249 (11%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
L++GDL + E ++ F G S +V R+ T+ S YG++ + S A A L
Sbjct: 123 LYVGDLHEDVAEEHLFEAFSKIGTVTSVRVCRDNATSRSLRYGYVNYFSRADAVVALDKL 182
Query: 136 NGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVK 195
N + + ++ R+ W+ RR G IFV +L++ V + LQE F + + V
Sbjct: 183 NHSLV--LDKPIRVMWSNRDPDARRSGVG---NIFVKNLSSSVDNASLQELF-SKFGDVL 236
Query: 196 GAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQY 255
KV + G S+GYGFV+F + ++ +NG L + R + +
Sbjct: 237 SCKVAKNE-DGTSRGYGFVQFTSQESADEAIGNLNGSLFNDRKLHV-------------- 281
Query: 256 QKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKRC 312
AT+ ND T +++ LD +T++++K F Q+G +V VKI P G
Sbjct: 282 --ATFIKKSERSANNDDKFTNLYMKHLDDDITEELVKLKFSQFGSIVSVKIMKRPDGSSL 339
Query: 313 --GFVQFAN 319
GFV F N
Sbjct: 340 GFGFVSFQN 348
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 127/243 (52%), Gaps = 12/243 (4%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
PDA G+ ++++ +L ++ + + +F G+ +S KV +N+ S GYGF++F S
Sbjct: 201 PDARRSGVGNIFVKNLSSSVDNASLQELFSKFGDVLSCKVAKNEDGT-SRGYGFVQFTSQ 259
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATY-GAGERRQDDGPDFT-IFVGDLAADVTDYVL 183
+A+ + NG S + +L+ AT+ ER ++ FT +++ L D+T+ ++
Sbjct: 260 ESADEAIGNLNG----SLFNDRKLHVATFIKKSERSANNDDKFTNLYMKHLDDDITEELV 315
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F + + S+ K++ R G S G+GFV F + +++ + MNG+L ++ + +
Sbjct: 316 KLKF-SQFGSIVSVKIMK-RPDGSSLGFGFVSFQNPESAIKAQSTMNGMLLGSKALYV-- 371
Query: 244 AATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVH 303
A +K +QY + ++ + ++ N + +++ + V DD L+ F ++G +
Sbjct: 372 ARAQKKEERKQYLQRLHEEKR-NEIMTRCNESNVYIKNIHDEVDDDALRARFVEFGNITS 430
Query: 304 VKI 306
K+
Sbjct: 431 AKV 433
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 82/183 (44%), Gaps = 14/183 (7%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +L++ L + E + F G VS K+++ + S G+GF+ F + +A +
Sbjct: 296 DKFTNLYMKHLDDDITEELVKLKFSQFGSIVSVKIMK-RPDGSSLGFGFVSFQNPESAIK 354
Query: 131 VLQTFNGTQMPST--------EQNFRLNWATYGAGERRQD---DGPDFTIFVGDLAADVT 179
T NG + S ++ R + E+R + + +++ ++ +V
Sbjct: 355 AQSTMNGMLLGSKALYVARAQKKEERKQYLQRLHEEKRNEIMTRCNESNVYIKNIHDEVD 414
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
D L+ F + ++ AKV+ D G S+G+GFV + E ++ M GV+ +P+
Sbjct: 415 DDALRARF-VEFGNITSAKVMRD-DKGISRGFGFVCYSTPEEAKSAVNNMRGVMFFGKPL 472
Query: 240 RIG 242
+
Sbjct: 473 YVA 475
>gi|294892363|ref|XP_002774026.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239879230|gb|EER05842.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 636
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 126/249 (50%), Gaps = 24/249 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL+P + E+ + +F G S +V R+ T S GY ++ F + A AER L T
Sbjct: 35 SLYVGDLKPDVTEAMLYEVFNGVGPVASIRVCRDSVTRRSLGYAYVNFHNVADAERALDT 94
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + P + R+ W+ R+ + +FV +L + + L +TF +++ ++
Sbjct: 95 LNYS--PIRGKQCRIMWSHRDPTLRKAGNA---NVFVKNLDKTIDNKALYDTF-SLFGNI 148
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV TD G+S+GYGFV F ++ +++T++NG++ + + +GP
Sbjct: 149 LSCKVATD-DDGKSRGYGFVHFENDESAHKAITKLNGMMIGEKAVYVGP----------- 196
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPS-VTDDILKTVFGQYGELVHVKI---PAGK 310
+QK + Q G+ T +++ L S T++ ++ F ++G++ V I G+
Sbjct: 197 FQKHAERAEQ--HGDEPRKFTNVYIKHLPESWTTEEDVQKAFEEFGKITSVAIQTDRKGR 254
Query: 311 RCGFVQFAN 319
R FV + +
Sbjct: 255 RFAFVNYED 263
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 12/125 (9%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++V +L DV D L++ F + + KV+ D TG S+G+GFV F ++++ +++
Sbjct: 340 NLYVKNLPEDVDDEKLRQMFEQ-FGEITSPKVMVDENTGVSRGFGFVCFANQADGEKAIQ 398
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQK-----------ATYQNTQGSQGENDPNNTT 276
M+ L +P+ + A + A + Q+ YQ +G + N PN +
Sbjct: 399 AMHLKLYGGKPLFVAVAEKRDARIERLQQRYRAGIPMGGFQQNYQGYRGPRNFNAPNPSP 458
Query: 277 IFVGG 281
++ G
Sbjct: 459 MYYSG 463
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 35/62 (56%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+L++ +L +++ + +F GE S KV+ ++ T S G+GF+ F + A E+ +Q
Sbjct: 340 NLYVKNLPEDVDDEKLRQMFEQFGEITSPKVMVDENTGVSRGFGFVCFANQADGEKAIQA 399
Query: 135 FN 136
+
Sbjct: 400 MH 401
>gi|344301362|gb|EGW31674.1| hypothetical protein SPAPADRAFT_62285 [Spathaspora passalidarum
NRRL Y-27907]
Length = 478
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 111/206 (53%), Gaps = 15/206 (7%)
Query: 51 PVPPPSQQTQPYGVAPDASSDGIRS-----LWIGDLQPWMEESYIASIFGHTGEFVSGKV 105
P P +++T P + P ++ +G R L++G+L + E ++ F G S K+
Sbjct: 45 PSKPDTKETTP--ITPASAVEGGREVSNKILYVGNLSKSISEEFLKDTFASAGAIQSVKI 102
Query: 106 IRNKQT-NFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD-- 162
+ +K F+ Y FIE+ ++ AA+ L T NG + + E ++NWA A +
Sbjct: 103 LNDKNKPGFN--YAFIEYENNQAADMALNTMNGKILQNFE--IKINWAFQSATITTANTP 158
Query: 163 DGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
+ P F IFVGDL+ ++ D L++ F + + S+K A V+ D T RS+GYGFV F ++S+
Sbjct: 159 EDPSFNIFVGDLSPEINDEKLKQAF-SKFKSLKQAHVMWDMQTSRSRGYGFVTFSNQSDA 217
Query: 223 LRSMTEMNGVLCSTRPMRIGPAATKK 248
++ MNG + R +R A+ K+
Sbjct: 218 ELALQTMNGEWLNGRAIRCNWASHKQ 243
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 22/158 (13%)
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE 228
++VG+L+ +++ L++TF A +++ K++ D+ Y F+ + + ++
Sbjct: 73 LYVGNLSKSISEEFLKDTF-ASAGAIQSVKILNDKNK-PGFNYAFIEYENNQAADMALNT 130
Query: 229 MNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTD 288
MNG + ++I A +Q AT + DP+ IFVG L P + D
Sbjct: 131 MNGKILQNFEIKINWA----------FQSATITTANTPE---DPS-FNIFVGDLSPEIND 176
Query: 289 DILKTVFGQYGEL--VHV----KIPAGKRCGFVQFANR 320
+ LK F ++ L HV + + GFV F+N+
Sbjct: 177 EKLKQAFSKFKSLKQAHVMWDMQTSRSRGYGFVTFSNQ 214
>gi|427797617|gb|JAA64260.1| Putative trna selenocysteine 1-associated protein 1, partial
[Rhipicephalus pulchellus]
Length = 195
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 93/177 (52%), Gaps = 26/177 (14%)
Query: 111 TNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQ--NFRLNWATY-------------- 154
+ GYGF++F AAER L NG +P+ Q FRLN A
Sbjct: 14 SRLPRGYGFLDFGDEEAAERALLRCNGKPIPNAMQPKTFRLNHANNSTGGGGGGGGGGYQ 73
Query: 155 ------GAGERRQ--DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTG 206
G G R Q + ++FVGDL+ADV D +L + F Y SV+ AKVV D TG
Sbjct: 74 QQGYANGGGGRPQYGSSSNELSMFVGDLSADVDDTLLYQAFSQRYPSVRAAKVVLD-PTG 132
Query: 207 RSKGYGFVRFGDESEQLRSMTEM-NGVLCSTRPMRIGPAATKKAATGQQYQKATYQN 262
SKG+GFVRF D +E ++ +M + +L ++P+R+G A ++AA G Q+ Y+N
Sbjct: 133 LSKGFGFVRFSDGTEYQEALVDMQHSLLVGSKPIRVGVANPRRAAAGPGGQRVFYRN 189
>gi|345324102|ref|XP_001514793.2| PREDICTED: nucleolysin TIAR-like [Ornithorhynchus anatinus]
Length = 452
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 106/203 (52%), Gaps = 5/203 (2%)
Query: 117 YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
Y F+EF H A L NG ++ E ++NWAT + +++ D F +FVGDL+
Sbjct: 130 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSP 186
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
++T ++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G
Sbjct: 187 EITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGG 245
Query: 237 RPMRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVF 295
R +R A K A + +T Q + ++ P N T++ GG+ +TD +++ F
Sbjct: 246 RQIRTNWATRKPPAPKSTQENSTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTF 305
Query: 296 GQYGELVHVKIPAGKRCGFVQFA 318
+G+++ +++ K FV+F+
Sbjct: 306 SPFGQIMEIRVFPEKGYSFVRFS 328
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 179 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 238
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDG---------------PDFTIFVGDLAADV 178
G + + R NWAT A + Q++ + T++ G +A+ +
Sbjct: 239 GGQWLGGRQ--IRTNWATRKPPAPKSTQENSTKQLRFEDVVNQSSPKNCTVYCGGIASGL 296
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 297 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 342
>gi|255940906|ref|XP_002561222.1| Pc16g09030 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585845|emb|CAP93573.1| Pc16g09030 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 734
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 124/276 (44%), Gaps = 31/276 (11%)
Query: 55 PSQQTQPYGVAPDASSDGIR------SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRN 108
P P P+A+ D SL++G+L P + E+ + +F G+ S +V R+
Sbjct: 20 PEANGAPVEATPEAAGDAANNQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRD 79
Query: 109 KQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT 168
T S GY ++ + + A ER L+ N T + + R+ W+ R+ G
Sbjct: 80 AVTRRSLGYAYVNYNNTADGERALEDLNYTLIKG--KPCRIMWSQRDPALRKTGQG---N 134
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE 228
+F+ +L + + L +TF A + ++ KV D SKGYGFV + ++
Sbjct: 135 VFIKNLDNAIDNKALHDTF-AAFGNILSCKVAQDEFA-NSKGYGFVHYETAEAANNAIKH 192
Query: 229 MNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTD 288
+NG+L + + + +G +KK + Q E N T I++ +D +TD
Sbjct: 193 VNGMLLNDKKVFVGHHISKK-------------DRQSKFEEMKANFTNIYIKNIDLEITD 239
Query: 289 DILKTVFGQYGE-----LVHVKIPAGKRCGFVQFAN 319
D +T+F +GE L H + + GFV +AN
Sbjct: 240 DEFRTMFEAFGEITSATLSHDQDGKSRGFGFVNYAN 275
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 113/245 (46%), Gaps = 13/245 (5%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S KV +++ N S+GYGF+ + +
Sbjct: 125 PALRKTGQGNVFIKNLDNAIDNKALHDTFAAFGNILSCKVAQDEFAN-SKGYGFVHYETA 183
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQ 184
AA ++ NG + + + + + ++ +FT I++ ++ ++TD +
Sbjct: 184 EAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNIYIKNIDLEITDDEFR 243
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
F A + + A + D+ G+S+G+GFV + + ++ EMN ++ + +G A
Sbjct: 244 TMFEA-FGEITSATLSHDQD-GKSRGFGFVNYANHESAEAAVAEMNEKEVKSQKLYVGRA 301
Query: 245 ATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
K + +QY+ A + QG N ++V L + D+ L+ +F YG +
Sbjct: 302 QKKHEREEELRKQYEAARMEKASKYQGVN------LYVKNLTDDIDDEKLRDLFTPYGTI 355
Query: 302 VHVKI 306
K+
Sbjct: 356 TSAKV 360
Score = 37.4 bits (85), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 198 KVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQK 257
K + G+SKG+GFV F E +++TEMN + + +P+ + A K Q
Sbjct: 416 KKTEKKAFGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQLEAS 475
Query: 258 ATYQNT 263
+NT
Sbjct: 476 IQARNT 481
>gi|366999420|ref|XP_003684446.1| hypothetical protein TPHA_0B03420 [Tetrapisispora phaffii CBS 4417]
gi|357522742|emb|CCE62012.1| hypothetical protein TPHA_0B03420 [Tetrapisispora phaffii CBS 4417]
Length = 579
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 126/271 (46%), Gaps = 28/271 (10%)
Query: 54 PPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF 113
P + +T+ D +S SL++G+L P + E+ + IF G S +V R+ T
Sbjct: 33 PAASETEANNSNVDTTS---ASLYVGELDPSVSEALLYDIFSPIGPVTSIRVCRDAITKT 89
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGD 173
S GY ++ F H + ++ N + P + R+ W+ R++ G IF+ +
Sbjct: 90 SLGYAYVNFNDHESGRTAIEKLNYS--PIKGKPCRIMWSQRDPALRKKGAG---NIFIKN 144
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
L D+ + L +TF +V+ ++ K+ TD TG+SKG+GFV F +++ + ++ +NG++
Sbjct: 145 LHPDIDNKALHDTF-SVFGNILSCKIATDE-TGKSKGFGFVHFEEDNAAVEAVDAINGMM 202
Query: 234 CSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKT 293
+ R + + +KK + + E N T ++V +D +D
Sbjct: 203 LNGREVYVAQHVSKK-------------DRESKLEEVKANFTNVYVKNVDVDTPEDEFTA 249
Query: 294 VFGQYGELVHVKIPAGKR-----CGFVQFAN 319
+F +YG + + + GF+ F N
Sbjct: 250 LFSKYGPITSIAMEKDSEGKFRGFGFINFEN 280
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 86/202 (42%), Gaps = 20/202 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ ++ E ++F G S + ++ + F G+GFI F +H A + ++
Sbjct: 232 NVYVKNVDVDTPEDEFTALFSKYGPITSIAMEKDSEGKF-RGFGFINFENHDDAAKAVEE 290
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDF--------------TIFVGDLAADVTD 180
N + + Y ER Q+ + +FV +L + D
Sbjct: 291 LNDLEFKGQKLYVGRAQKKY---ERLQELKKQYEASRLEKLAKYQGVNLFVKNLDDSIDD 347
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L+ F A + S+ AKV+ + G+SK +GFV F E +++TE N + + +P+
Sbjct: 348 EKLEAEF-APFGSITSAKVMRNEE-GKSKNFGFVCFSTPEEATKAITEKNQQIVAGKPLY 405
Query: 241 IGPAATKKAATGQQYQKATYQN 262
+ A K Q Q+ +N
Sbjct: 406 VAIAQRKDVRRSQLAQQIQARN 427
>gi|8778484|gb|AAF79492.1|AC022492_36 F1L3.2 [Arabidopsis thaliana]
Length = 575
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 144/314 (45%), Gaps = 62/314 (19%)
Query: 53 PPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTN 112
P PS P G P RS+++G++ + E + +F TG S K+IR ++++
Sbjct: 131 PIPSGNLPP-GFDPSTC----RSVYVGNIHIQVTEPLLQEVFAGTGPVESCKLIRKEKSS 185
Query: 113 FSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVG 172
YGF+ + +A + + NG + Q ++NWA Y +G+R +D F IFVG
Sbjct: 186 ----YGFVHYFDRRSAGLAILSLNGRHLFG--QPIKVNWA-YASGQR-EDTSSHFNIFVG 237
Query: 173 DLAADVTDYVL------------QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
DL+ +VTD +L ET + + A+V+ D+ TGRS+G+GFV F ++
Sbjct: 238 DLSPEVTDAMLFTCFSVYPTCSFAETLPTIAIVCRDARVMWDQKTGRSRGFGFVSFRNQQ 297
Query: 221 EQLRSMTEMNGVLCS-------------------TRPMRIGPAATKKAATGQQYQKATYQ 261
+ ++ E+ G C+ +R +R ATK A +G+ Q + +
Sbjct: 298 DAQTAIDEITGECCNLFSPLIVDILFCFSGKWLGSRQIRCN-WATKGATSGEDKQSSDSK 356
Query: 262 N---------------TQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HV 304
+ T G EN+ TT++VG L P V+ L F G V V
Sbjct: 357 SVVELTSGVSEDGKDTTNGEAPENNAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEV 416
Query: 305 KIPAGKRCGFVQFA 318
++ K GFV+++
Sbjct: 417 RVQRDKGFGFVRYS 430
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 69/209 (33%)
Query: 75 SLWIGDLQPWMEESYIASIFGH--TGEFVS-----------GKVIRNKQTNFSEGYGFIE 121
++++GDL P + ++ + + F T F +V+ +++T S G+GF+
Sbjct: 233 NIFVGDLSPEVTDAMLFTCFSVYPTCSFAETLPTIAIVCRDARVMWDQKTGRSRGFGFVS 292
Query: 122 FVSHAAAER-------------------VLQTFNGTQMPSTEQNFRLNWATYGA--GERR 160
F + A+ +L F+G + S + R NWAT GA GE +
Sbjct: 293 FRNQQDAQTAIDEITGECCNLFSPLIVDILFCFSGKWLGS--RQIRCNWATKGATSGEDK 350
Query: 161 Q---------------DDGPDFT-------------IFVGDLAADVTDYVLQETFRAVYS 192
Q +DG D T ++VG+LA +V+ L F ++
Sbjct: 351 QSSDSKSVVELTSGVSEDGKDTTNGEAPENNAQYTTVYVGNLAPEVSQVDLHRHFHSL-- 408
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
GA V+ + R KG+GFVR+ E
Sbjct: 409 ---GAGVIEEVRVQRDKGFGFVRYSTHVE 434
>gi|168057049|ref|XP_001780529.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668007|gb|EDQ54623.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 647
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 124/248 (50%), Gaps = 27/248 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
S+++GDL+ + E+ + IF TG VS +V R+ T S GY ++ + S A R L+
Sbjct: 25 SVYVGDLEHNVSEAQLYEIFSQTGPVVSIRVCRDLITRRSLGYAYVNYHSAQDATRALEL 84
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ ++ R+ IF+ +L + + L +TF A + +
Sbjct: 85 LNFT--PVNGKPIRIMFSHRDPSLRKSGAA---NIFIKNLDKAIDNKALHDTFSA-FGGI 138
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV TD ++G+SKGYGFV+F E ++ ++NG+L + + + +GP +
Sbjct: 139 LSCKVATD-SSGQSKGYGFVQFEKEESAQSAIEKVNGMLLNDKQVFVGPFVRR------- 190
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL---VHVKIPAGK- 310
Q S G + NN ++V L + TDD LK VFG YG + V ++ GK
Sbjct: 191 ------QERDLSGGVSKFNN--VYVKNLGENTTDDELKKVFGAYGPISSAVVMRDNEGKS 242
Query: 311 RC-GFVQF 317
+C GFV F
Sbjct: 243 KCFGFVNF 250
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 84/185 (45%), Gaps = 14/185 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L + + +FG G S V+R+ + S+ +GF+ F A + ++
Sbjct: 204 NVYVKNLGENTTDDELKKVFGAYGPISSAVVMRDNEGK-SKCFGFVNFELADDAAKAVEA 262
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG + +E+ L + R + +++ +L V D L
Sbjct: 263 LNGKKQDEKEWYVGRAQKKSEREAELRAKFEQERKSRIEKYQGVNLYLKNLDDAVDDEKL 322
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+E F A Y ++ KV+ D G+S+G GFV F E R++TEMN + ++P+ +
Sbjct: 323 RELF-AEYGTITSCKVMKD-PQGQSRGSGFVAFSTPEEATRAVTEMNTKMVGSKPLYVAL 380
Query: 244 AATKK 248
A K+
Sbjct: 381 AQRKE 385
>gi|115452253|ref|NP_001049727.1| Os03g0278500 [Oryza sativa Japonica Group]
gi|108707490|gb|ABF95285.1| polyadenylate binding protein, types 1, 2, 3, 4 family protein,
expressed [Oryza sativa Japonica Group]
gi|113548198|dbj|BAF11641.1| Os03g0278500 [Oryza sativa Japonica Group]
gi|215678518|dbj|BAG92173.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222624669|gb|EEE58801.1| hypothetical protein OsJ_10348 [Oryza sativa Japonica Group]
Length = 647
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 114/251 (45%), Gaps = 30/251 (11%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+L++GDL + E ++ +FG G S +V R+ T+ S YG++ ++S A A L+
Sbjct: 39 ALYVGDLHESVREEHLLEVFGKIGTLTSVRVCRDNATSNSLRYGYVNYLSQADAAIALEK 98
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + + ++ R+ W+ RR G +FV +L V + LQE F + +
Sbjct: 99 LNHSLI--LDKPIRVMWSNRDPDARRSGVG---NVFVKNLNDLVDNVSLQELF-CKFGDI 152
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGV-LCSTRPMRIGPAATKKAATGQ 253
KV + G S+GYGFV+F + S+ +N C G+
Sbjct: 153 LSCKVAKNE-DGTSRGYGFVQFALQESADASIQNLNNSHFC-----------------GR 194
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP-----A 308
Q AT+ ND T +++ LD +T++++K F QYG ++ VKI
Sbjct: 195 QLHVATFIKKSERSTNNDDKYTNLYMKNLDDDITEELIKLKFSQYGLVISVKIMKRDDGT 254
Query: 309 GKRCGFVQFAN 319
K GFV F N
Sbjct: 255 SKGFGFVSFQN 265
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 125/243 (51%), Gaps = 12/243 (4%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
PDA G+ ++++ +L ++ + +F G+ +S KV +N+ S GYGF++F
Sbjct: 118 PDARRSGVGNVFVKNLNDLVDNVSLQELFCKFGDILSCKVAKNEDGT-SRGYGFVQFALQ 176
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATY-GAGERRQDDGPDFT-IFVGDLAADVTDYVL 183
+A+ +Q N + + L+ AT+ ER ++ +T +++ +L D+T+ ++
Sbjct: 177 ESADASIQNLNNSHFCGRQ----LHVATFIKKSERSTNNDDKYTNLYMKNLDDDITEELI 232
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F + Y V K++ R G SKG+GFV F + R+ MNG+L ++ + +
Sbjct: 233 KLKF-SQYGLVISVKIMK-RDDGTSKGFGFVSFQNPESAKRAKESMNGMLLGSKTLYVAR 290
Query: 244 AATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVH 303
A +K A +QY + ++ + ++ N + +++ ++ V DD L+ F ++G +
Sbjct: 291 A--QKKAERKQYLQRLHEEKR-NEIITKSNGSNVYIKNINDEVGDDALRERFNEFGNITS 347
Query: 304 VKI 306
KI
Sbjct: 348 AKI 350
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
+ D +L++ +L + E I F G +S K+++ + S+G+GF+ F + +A
Sbjct: 211 NDDKYTNLYMKNLDDDITEELIKLKFSQYGLVISVKIMK-RDDGTSKGFGFVSFQNPESA 269
Query: 129 ERVLQTFNGTQMPST--------EQNFRLNWATYGAGERRQD-----DGPDFTIFVGDLA 175
+R ++ NG + S ++ R + E+R + +G + +++ ++
Sbjct: 270 KRAKESMNGMLLGSKTLYVARAQKKAERKQYLQRLHEEKRNEIITKSNGSN--VYIKNIN 327
Query: 176 ADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCS 235
+V D L+E F + ++ AK++ D G SKG+GFV + E +++ M GV+
Sbjct: 328 DEVGDDALRERFNE-FGNITSAKIMRDEK-GISKGFGFVCYNTPEEAKCAVSNMRGVMFY 385
Query: 236 TRPMRIGPAATKKAATGQQYQK 257
+P+ + A K+ + Q+
Sbjct: 386 GKPLYVAIAQRKEERRAKLEQR 407
>gi|164657987|ref|XP_001730119.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
gi|159104014|gb|EDP42905.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
Length = 664
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 116/243 (47%), Gaps = 24/243 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++G+L+P + E+ + IF G S +V R+ T S GY ++ F++ +ER L+
Sbjct: 81 SLYVGELEPNVNEAILFEIFNMVGAVSSIRVCRDTVTRRSLGYAYVNFLNAEDSERALEQ 140
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ W+ G+RR G IF+ +L + + L +TF A + +
Sbjct: 141 LNYT--PIRGRPCRIMWSQRDPGQRRAGQG---NIFIKNLDEAIDNKALHDTF-AAFGKI 194
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV ++ S GYGFV + ++ +NG+L + + + +G +KK
Sbjct: 195 LSCKVASNEHG--SLGYGFVHYESNDAAEAAIKHVNGMLLNDKKVYVGHHISKK------ 246
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA---GKR 311
+ Q E + T ++V LDP+VT + + +F +YG++ I GK
Sbjct: 247 -------DRQAKIEEARAHYTNVYVKNLDPAVTQEEFEKLFEKYGKITSAAIATDQEGKS 299
Query: 312 CGF 314
GF
Sbjct: 300 RGF 302
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L P + + +F G+ S I Q S G+GF+ F H A + ++
Sbjct: 261 NVYVKNLDPAVTQEEFEKLFEKYGKITSA-AIATDQEGKSRGFGFVNFSEHEQAAKAVEE 319
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
N T+ +E+ L A A + +++ +L D D L
Sbjct: 320 LNDTEFHGQKLFLGRAQKKSEREEELRRAYEAAKNEKLSKYQGVNLYIKNLPEDFDDERL 379
Query: 184 QETFRAVYSSVKGAKVVTDRT-TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
QE F A + + AKV+ RT TG S+G+GFV + E +++ EMNG + RP+ +
Sbjct: 380 QEEF-APFGTTTSAKVM--RTPTGASRGFGFVCYSAPEEANKAVAEMNGKMIENRPLYVA 436
Query: 243 PAATKKAATGQQYQKATYQNTQ 264
A +K QQ Q+ Q
Sbjct: 437 -LAQRKDVRHQQLAAQMMQHNQ 457
>gi|345561329|gb|EGX44424.1| hypothetical protein AOL_s00193g6 [Arthrobotrys oligospora ATCC
24927]
Length = 744
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 116/251 (46%), Gaps = 26/251 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++G+L P + E+ + +F G+ S +V R+ T S GY ++ + + A ER L+
Sbjct: 52 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEE 111
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T + + R+ W+ R+ G +F+ +L + + L +TF A + ++
Sbjct: 112 LNYTLIKG--RPCRIMWSQRDPALRKTGHG---NVFIKNLDIAIDNKALHDTF-AAFGNI 165
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV D G SKGYGFV + ++ +NG+L + + + +G KK
Sbjct: 166 LSCKVAQDE-NGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVYVGHHIPKK------ 218
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP------A 308
Q E N T ++V +DP V+DD +T+F +G++ +
Sbjct: 219 -------ERQSKFDEMKANFTNVYVKNIDPEVSDDEFRTLFENFGQITSASLARDGDSGT 271
Query: 309 GKRCGFVQFAN 319
+ GFV F++
Sbjct: 272 SRGFGFVNFSS 282
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 93/216 (43%), Gaps = 40/216 (18%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ ++ P + + ++F + G+ S + R+ + S G+GF+ F SH AA +
Sbjct: 233 NVYVKNIDPEVSDDEFRTLFENFGQITSASLARDGDSGTSRGFGFVNFSSHEAAAAAVDA 292
Query: 135 FNGTQMP-------------STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDY 181
+ T++ E+ R + + + G ++V +L ++ D
Sbjct: 293 LHETELKGQALFVGRAQKKHEREEELRKQYEAARIEKASKYQG--VNLYVKNLDDEIDDE 350
Query: 182 VLQETFRAVYSSVKGAKVV------------------------TDRTTGRSKGYGFVRFG 217
L++ F + Y ++ AKV+ TD+ G+SKG+GFV F
Sbjct: 351 RLRQEF-SPYGTITSAKVMRDSLDSPKEKDGEESKVGEPEEKATDKKQGKSKGFGFVCFS 409
Query: 218 DESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ E +++ EMN + + +P+ + A K Q
Sbjct: 410 NPDEASKAVAEMNQRMVNGKPLYVALAQRKDVRKSQ 445
>gi|212540254|ref|XP_002150282.1| polyadenylate-binding protein [Talaromyces marneffei ATCC 18224]
gi|210067581|gb|EEA21673.1| polyadenylate-binding protein [Talaromyces marneffei ATCC 18224]
Length = 748
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 117/243 (48%), Gaps = 23/243 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++G+L P + E+ + +F G+ S +V R+ T S GY ++ + + A ER L+
Sbjct: 51 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 110
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T + + R+ W+ R+ G +F+ +L + + L +TF A + ++
Sbjct: 111 LNYTLIKG--RPCRIMWSQRDPALRKTGQG---NVFIKNLDTAIDNKALHDTF-AAFGNI 164
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV D G SKGYGFV + ++ +NG+L + + + +G +KK
Sbjct: 165 LSCKVAQDE-FGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKK------ 217
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP---AGKR 311
+ Q E N T ++V +DP VTD+ + +FG++G++ I +GK
Sbjct: 218 -------DRQSKFEEMKANFTNVYVKNIDPEVTDEEFRELFGKFGDITSATISRDDSGKS 270
Query: 312 CGF 314
GF
Sbjct: 271 RGF 273
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 110/236 (46%), Gaps = 13/236 (5%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+++I +L ++ + F G +S KV +++ N S+GYGF+ + + AA ++
Sbjct: 139 NVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKH 197
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQETFRAVYSS 193
NG + + + + + ++ +FT ++V ++ +VTD +E F +
Sbjct: 198 VNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYVKNIDPEVTDEEFRELF-GKFGD 256
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK---KAA 250
+ A + D +G+S+G+GFV + D ++ ++N + + +G A K +
Sbjct: 257 ITSATISRD-DSGKSRGFGFVNYVDHENAQTAVDDLNDKDFHGQKLYVGRAQKKHEREEE 315
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
+QY+ A + QG N ++V L V D+ L+ +F +G + K+
Sbjct: 316 LRRQYEAARLEKASKYQGVN------LYVKNLTDDVDDEKLRELFSAFGTITSAKV 365
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 90/245 (36%), Gaps = 58/245 (23%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ ++ P + + +FG G+ S + R+ + S G+GF+ +V H A+ +
Sbjct: 232 NVYVKNIDPEVTDEEFRELFGKFGDITSATISRD-DSGKSRGFGFVNYVDHENAQTAVDD 290
Query: 135 FN-----------GTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
N G E+ L A + ++V +L DV D L
Sbjct: 291 LNDKDFHGQKLYVGRAQKKHEREEELRRQYEAARLEKASKYQGVNLYVKNLTDDVDDEKL 350
Query: 184 QETFRAVYSSVKGAKVVTD----------------------------------------- 202
+E F A + ++ AKV+ D
Sbjct: 351 RELFSA-FGTITSAKVMRDTVGAGSDSEKEETKESSEEVEEPKEEETNAKTEDEDKTDAK 409
Query: 203 ----RTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKA 258
+ G+SKG+GFV F E +++TEMN + + +P+ + A K Q
Sbjct: 410 KSDKKVFGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRKSQLEASI 469
Query: 259 TYQNT 263
+NT
Sbjct: 470 QARNT 474
>gi|224046575|ref|XP_002200268.1| PREDICTED: polyadenylate-binding protein 1 [Taeniopygia guttata]
Length = 637
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 117/250 (46%), Gaps = 24/250 (9%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F A
Sbjct: 5 APSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPAD 64
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
AER L T N + + R+ W+ R+ G IF+ +L + + L +TF
Sbjct: 65 AERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYDTF 119
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G ++
Sbjct: 120 SA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 248 KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI- 306
K + G T +++ + D+ LK +FG++G + VK+
Sbjct: 177 K-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVM 223
Query: 307 --PAGKRCGF 314
+GK GF
Sbjct: 224 TDESGKSKGF 233
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|432097499|gb|ELK27684.1| Polyadenylate-binding protein 4-like protein [Myotis davidii]
Length = 370
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 118/243 (48%), Gaps = 24/243 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + E+ + F G +S ++ R+ T S GY ++ F+ A A+R L T
Sbjct: 11 SLYVGDLPPDVTENMLFLKFSTVGTVLSIRICRDLVTRCSLGYAYVNFLHVADAQRALDT 70
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + Q+ RL W+ A R+ G +F+ +L + + L E F +V+ +
Sbjct: 71 MNFDVIQG--QSIRLMWSQRDAYLRKSGIG---NVFIKNLDKSIDNKTLYEHF-SVFGKI 124
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
+KV+ D S+GYGFV F +++ R++ EMNGVL + +GP ++ +
Sbjct: 125 LSSKVMCDDQG--SRGYGFVHFQNQAAADRAIEEMNGVLLKDFRLFVGPFKNRRDREAEL 182
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKR 311
KA+ T I++ + D+ LK F YG++V VK+ +GK
Sbjct: 183 QNKAS-------------EFTNIYIKNFGDEMDDEKLKEFFSHYGKIVSVKVMTDSSGKS 229
Query: 312 CGF 314
GF
Sbjct: 230 KGF 232
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 129/253 (50%), Gaps = 24/253 (9%)
Query: 72 GIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
GI +++I +L ++ + F G+ +S KV+ + Q S GYGF+ F + AAA+R
Sbjct: 96 GIGNVFIKNLDKSIDNKTLYEHFSVFGKILSSKVMCDDQG--SRGYGFVHFQNQAAADRA 153
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERR----QDDGPDFT-IFVGDLAADVTDYVLQET 186
++ NG + ++FRL + R Q+ +FT I++ + ++ D L+E
Sbjct: 154 IEEMNGVLL----KDFRLFVGPFKNRRDREAELQNKASEFTNIYIKNFGDEMDDEKLKEF 209
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA-- 244
F + Y + KV+TD ++G+SKG+GFV F R++ +NG + + +G A
Sbjct: 210 F-SHYGKIVSVKVMTD-SSGKSKGFGFVSFDTHEAAKRAVDIVNGREIFGQQVFVGRAQK 267
Query: 245 -ATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVH 303
A ++A Q +++ + + +G T I+V LD ++ ++ L+ F +G ++
Sbjct: 268 KAERQAELKQLFEQRKQERSWRVRG------TKIYVKNLDETIDEEKLRKAFSSFGSIIR 321
Query: 304 VKI--PAGKRCGF 314
VK+ G+ GF
Sbjct: 322 VKVMQEEGRSRGF 334
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 15/181 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+++I + M++ + F H G+ VS KV+ + S+G+GF+ F +H AA+R +
Sbjct: 191 NIYIKNFGDEMDDEKLKEFFSHYGKIVSVKVMTDSSGK-SKGFGFVSFDTHEAAKRAVDI 249
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E+ L + R I+V +L + + L
Sbjct: 250 VNGREIFGQQVFVGRAQKKAERQAELKQLFEQRKQERSWRVRGTKIYVKNLDETIDEEKL 309
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
++ F + + S+ KV+ + GRS+G+G + F E R+M EMNG L ++P+ I
Sbjct: 310 RKAFSS-FGSIIRVKVMQE--EGRSRGFGLICFSSPEEAARAMAEMNGRLLGSKPVNIAL 366
Query: 244 A 244
A
Sbjct: 367 A 367
>gi|308486599|ref|XP_003105496.1| CRE-PAB-2 protein [Caenorhabditis remanei]
gi|308255462|gb|EFO99414.1| CRE-PAB-2 protein [Caenorhabditis remanei]
Length = 730
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 128/271 (47%), Gaps = 27/271 (9%)
Query: 54 PPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF 113
PP+ P AP+A+ + SL+IGDL P + ES + F G +S +V R+ +
Sbjct: 37 PPANMGYPPN-APNATYS-MASLYIGDLHPDVTESMLFEKFSMAGPVLSIRVCRDNTSRL 94
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGD 173
S GY ++ F A AER L T N + + R+ W+ RR +G IF+ +
Sbjct: 95 SLGYAYVNFQQPADAERALDTMNFEVIHG--RPMRIMWSQRDPAARRAGNG---NIFIKN 149
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
L + + + +TF +++ ++ KV TD G SKGYGFV F E+ L ++ ++NG+L
Sbjct: 150 LDRVIDNKSIYDTF-SLFGNILSCKVATDE-EGNSKGYGFVHFETEASALTAIEKVNGML 207
Query: 234 CSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKT 293
S + + +G K Q+ ++ GE+ T +F+ + + L
Sbjct: 208 LSDKKVFVG----KFQPRAQRMKEL---------GESGLKYTNVFIKNFGDHLDEKKLTE 254
Query: 294 VFGQYGELVHVKIPAG-----KRCGFVQFAN 319
+F +YGE+ + K GFV F +
Sbjct: 255 MFSKYGEITSAVVMTDNSGKPKGFGFVAFVD 285
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 94/217 (43%), Gaps = 19/217 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+++I + ++E + +F GE S V+ + +G+GF+ FV AA + + T
Sbjct: 237 NVFIKNFGDHLDEKKLTEMFSKYGEITSA-VVMTDNSGKPKGFGFVAFVDPDAAIKAVDT 295
Query: 135 FNGTQMPST-------------EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDY 181
N + + T E+ L + R ++V ++ ++TD
Sbjct: 296 LNESTLEGTDLKLSVCRAQKKSERTAELKRKYEALKQERVQRYQGVNLYVKNIEEEMTDD 355
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
L+E F A + S+ AKV+ D GRSKG+GFV F E ++TEMN + +P+ +
Sbjct: 356 GLREHF-ANFGSITSAKVMVDEN-GRSKGFGFVCFEKPEEATAAVTEMNSKMIGAKPLYV 413
Query: 242 GPAATK---KAATGQQYQKATYQNTQGSQGENDPNNT 275
A K +A QY + G Q P T
Sbjct: 414 ALAQRKEDRRAQLASQYMQRLATLRMGQQTNGVPGMT 450
>gi|432881580|ref|XP_004073850.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 631
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 116/259 (44%), Gaps = 26/259 (10%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S I SL++GDL + E+ + F G VS +V R+ T S GY ++ F
Sbjct: 3 PGAPSYPIASLYVGDLHQDVTEAMLYEKFSPAGAIVSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + Q R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--QPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D S+GYGFV F R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SRGYGFVHFETHDAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +F ++G V+
Sbjct: 175 SRK-------------EREAELGARAREFTNVYIKNFGEDMDDEKLKEIFSKFGNATSVR 221
Query: 306 IP-----AGKRCGFVQFAN 319
+ G+ GFV F N
Sbjct: 222 VMTDESGGGRGFGFVSFEN 240
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 89/185 (48%), Gaps = 15/185 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+++I + M++ + IF G S +V+ + ++ G+GF+ F +H A++ +
Sbjct: 192 NVYIKNFGEDMDDEKLKEIFSKFGNATSVRVMTD-ESGGGRGFGFVSFENHEDAQKAVDE 250
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E+ L + R ++V +L + D L
Sbjct: 251 MNGKELNGRIMFVGRAQKKMERQMELKRRFEQMKQDRTTRYQGVNLYVKNLDDGIDDERL 310
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
++ F + + S+ AKV+ + GRSKG+GFV F E +++TEMNG + +T+P+ +
Sbjct: 311 RKEF-SPFGSITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVAL 367
Query: 244 AATKK 248
A K+
Sbjct: 368 AQRKE 372
>gi|218192545|gb|EEC74972.1| hypothetical protein OsI_11001 [Oryza sativa Indica Group]
Length = 647
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 114/251 (45%), Gaps = 30/251 (11%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+L++GDL + E ++ +FG G S +V R+ T+ S YG++ ++S A A L+
Sbjct: 39 ALYVGDLHESVREEHLLEVFGKIGTLTSVRVCRDNATSNSLRYGYVNYLSQADAAIALEK 98
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + + ++ R+ W+ RR G +FV +L V + LQE F + +
Sbjct: 99 LNHSLI--LDKPIRVMWSNRDPDARRSGVG---NVFVKNLNDLVDNVSLQELF-CKFGDI 152
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGV-LCSTRPMRIGPAATKKAATGQ 253
KV + G S+GYGFV+F + S+ +N C G+
Sbjct: 153 LSCKVAKNE-DGTSRGYGFVQFALQESADASIQNLNNSHFC-----------------GR 194
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP-----A 308
Q AT+ ND T +++ LD +T++++K F QYG ++ VKI
Sbjct: 195 QLHVATFIKKSERSTNNDDKYTNLYMKNLDDDITEELIKLKFSQYGLVISVKIMKRDDGT 254
Query: 309 GKRCGFVQFAN 319
K GFV F N
Sbjct: 255 SKGFGFVSFQN 265
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 125/243 (51%), Gaps = 12/243 (4%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
PDA G+ ++++ +L ++ + +F G+ +S KV +N+ S GYGF++F
Sbjct: 118 PDARRSGVGNVFVKNLNDLVDNVSLQELFCKFGDILSCKVAKNEDGT-SRGYGFVQFALQ 176
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATY-GAGERRQDDGPDFT-IFVGDLAADVTDYVL 183
+A+ +Q N + + L+ AT+ ER ++ +T +++ +L D+T+ ++
Sbjct: 177 ESADASIQNLNNSHFCGRQ----LHVATFIKKSERSTNNDDKYTNLYMKNLDDDITEELI 232
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F + Y V K++ R G SKG+GFV F + R+ MNG+L ++ + +
Sbjct: 233 KLKF-SQYGLVISVKIMK-RDDGTSKGFGFVSFQNPESAKRAKESMNGMLLGSKTLYVAR 290
Query: 244 AATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVH 303
A +K A +QY + ++ + ++ N + +++ ++ V DD L+ F ++G +
Sbjct: 291 A--QKKAERKQYLQCLHEEKR-NEIITKSNGSNVYIKNINDEVGDDALRERFNEFGNITS 347
Query: 304 VKI 306
KI
Sbjct: 348 AKI 350
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
+ D +L++ +L + E I F G +S K+++ + S+G+GF+ F + +A
Sbjct: 211 NDDKYTNLYMKNLDDDITEELIKLKFSQYGLVISVKIMK-RDDGTSKGFGFVSFQNPESA 269
Query: 129 ERVLQTFNGTQMPST--------EQNFRLNWATYGAGERRQD-----DGPDFTIFVGDLA 175
+R ++ NG + S ++ R + E+R + +G + +++ ++
Sbjct: 270 KRAKESMNGMLLGSKTLYVARAQKKAERKQYLQCLHEEKRNEIITKSNGSN--VYIKNIN 327
Query: 176 ADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCS 235
+V D L+E F + ++ AK++ D G SKG+GFV + E +++ M GV+
Sbjct: 328 DEVGDDALRERFNE-FGNITSAKIMRDEK-GISKGFGFVCYNTPEEAKCAVSNMRGVMFY 385
Query: 236 TRPMRIGPAATKKAATGQQYQK 257
+P+ + A K+ + Q+
Sbjct: 386 GKPLYVAIAQRKEERRAKLEQR 407
>gi|189208127|ref|XP_001940397.1| nucleolysin TIA-1 isoform p40 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976490|gb|EDU43116.1| nucleolysin TIA-1 isoform p40 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 470
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 138/311 (44%), Gaps = 50/311 (16%)
Query: 36 QHQTPVPPPVG--WTPQPVPPPSQQTQ--PYGVAPDASSDGIRSLWIGDLQPWMEESYIA 91
Q+ P+P + + P+ P S Q P AP+ + R+L++G L P + E +
Sbjct: 44 QNNNPIPTAISSPMSGNPMSPTSGQPGYVPRRAAPEPNK---RALYVGGLDPRVTEDVLR 100
Query: 92 SIFGHTGEFVSGKVIRNKQTNF----SEG--YGFIEFVSHAAAERVLQTFNGTQMPSTEQ 145
IF TG S K+I +K + S+G YGF+E+ AAER + T NG ++ + E
Sbjct: 101 QIFETTGHVQSVKIIPDKTASSPSFNSKGFNYGFVEYDDPGAAERGMATLNGRRIHNNE- 159
Query: 146 NFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTT 205
D F IFVGDL+ +V D VL + F + + V A+V+ D T
Sbjct: 160 ----------------DTSNHFHIFVGDLSNEVNDEVLLQAF-STFGPVSEARVMWDMKT 202
Query: 206 GRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN--- 262
GRS+GYGFV F D ++ R+++ M+G +R +R A K + Q Q
Sbjct: 203 GRSRGYGFVAFRDRADADRALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMASMGMTP 262
Query: 263 ----------TQGSQ------GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
T G Q + TT +VG L P + L +F +G + +
Sbjct: 263 TTPFGHHHFPTHGVQSYDMVVAQTPAWQTTCYVGNLTPYTSQSDLVPLFQNFGYVTETRF 322
Query: 307 PAGKRCGFVQF 317
+ + F++
Sbjct: 323 QSDRGFAFIKM 333
>gi|291408596|ref|XP_002720594.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Oryctolagus cuniculus]
Length = 614
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 117/252 (46%), Gaps = 24/252 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ + G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLHKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
Query: 306 I---PAGKRCGF 314
+ +GK GF
Sbjct: 222 VMTDESGKSKGF 233
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|116191711|ref|XP_001221668.1| hypothetical protein CHGG_05573 [Chaetomium globosum CBS 148.51]
gi|88181486|gb|EAQ88954.1| hypothetical protein CHGG_05573 [Chaetomium globosum CBS 148.51]
Length = 413
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 105/220 (47%), Gaps = 22/220 (10%)
Query: 117 YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
YGF+E+ AAER +QT NG ++ +E R+NWA ++D F IFVGDL+
Sbjct: 71 YGFVEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSNSTNKEDTSNHFHIFVGDLSN 128
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+V D VL + F A + SV A+V+ D TGRS+GYGFV F + + ++++ M+G +
Sbjct: 129 EVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGS 187
Query: 237 RPMRIGPAATKKAATGQQYQKATYQN-------------TQGSQGENDPNN------TTI 277
R +R A K + Q Q T G + N TT
Sbjct: 188 RAIRCNWANQKGQPSMAQQQAMQQMGMTPTTPYGHHHFPTHGVHSYDMIVNQTPAWQTTC 247
Query: 278 FVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
+VG L P T + +F +G +V + A + FV+
Sbjct: 248 YVGNLTPYTTQQDIVPLFQNFGFVVESRFQADRGFSFVKM 287
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 78/211 (36%), Gaps = 36/211 (17%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL + + + F G +V+ + +T S GYGF+ F AE+ L +
Sbjct: 121 IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSM 180
Query: 136 NGTQMPSTEQNFRLNWAT-----------------------YGAGERRQDDGPDFTIFVG 172
+G + S + R NWA YG + + V
Sbjct: 181 DGEWLGS--RAIRCNWANQKGQPSMAQQQAMQQMGMTPTTPYGHHHFPTHGVHSYDMIVN 238
Query: 173 DLAA--------DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLR 224
A ++T Y Q+ ++ + VV R +G+ FV+
Sbjct: 239 QTPAWQTTCYVGNLTPYTTQQDIVPLFQNF--GFVVESRFQA-DRGFSFVKMDTHENAAM 295
Query: 225 SMTEMNGVLCSTRPMRIGPAATKKAATGQQY 255
++ ++NG + RP++ K + QQ+
Sbjct: 296 AICQLNGYNVNGRPLKCSWGKDKTPSHPQQF 326
>gi|410904819|ref|XP_003965889.1| PREDICTED: polyadenylate-binding protein 1-like [Takifugu rubripes]
Length = 636
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 116/257 (45%), Gaps = 26/257 (10%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--RPLRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +F +YG + ++
Sbjct: 175 SRK-------------EREAELGARAREFTNVYIKNFGEDMDDEKLKELFSKYGPALSIR 221
Query: 306 IPA-----GKRCGFVQF 317
+ K GFV F
Sbjct: 222 VMTDDGGKSKGFGFVSF 238
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 94/185 (50%), Gaps = 15/185 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+++I + M++ + +F G +S +V+ + S+G+GF+ F H A++ +
Sbjct: 192 NVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTDDGGK-SKGFGFVSFERHEDAQKAVDD 250
Query: 135 FNGTQMP--------STEQNFRLNWATYGAGERRQDDGPDF---TIFVGDLAADVTDYVL 183
NG ++ + ++ R N + +QD + ++V +L + D L
Sbjct: 251 MNGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERL 310
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T+P+ +
Sbjct: 311 RKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVAL 367
Query: 244 AATKK 248
A K+
Sbjct: 368 AQRKE 372
>gi|326511990|dbj|BAJ95976.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 116/248 (46%), Gaps = 27/248 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL+ + +S + +F G+ VS +V R+ + S GY ++ + + A R ++
Sbjct: 123 SLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAARAMEA 182
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N P + R+ ++ RR IF+ +L + + L +TF A + ++
Sbjct: 183 LNFA--PLNNKPIRVMYSNRDPSSRRSGSA---NIFIKNLDKTIDNKTLHDTFSA-FGAI 236
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV D G+SKG+GFV++ E +M +NG+L + +P+ +GP +K
Sbjct: 237 LSCKVAMD-DIGQSKGFGFVQYEKEESAQSAMKSLNGMLINDKPVYVGP-FLRKQERDNS 294
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL----VHVKIPAGK 310
KA + N +FV L S T + L VF +YG + V + +
Sbjct: 295 SDKAKFNN--------------VFVKNLSESTTKEDLIKVFSEYGTITSAVVMIGMDGKS 340
Query: 311 RC-GFVQF 317
RC GFV F
Sbjct: 341 RCFGFVNF 348
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 71/167 (42%), Gaps = 25/167 (14%)
Query: 156 AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVR 215
AG Q P +++VGDL A+VTD L E F V +V D + RS GY +V
Sbjct: 111 AGGAAQQPLPTTSLYVGDLEANVTDSQLYELFSQA-GQVVSVRVCRDVNSRRSLGYAYVN 169
Query: 216 FGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNT 275
+ + + R+M +N + +P+R+ Y N S + N
Sbjct: 170 YSNPMDAARAMEALNFAPLNNKPIRV-----------------MYSNRDPSSRRSGSAN- 211
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA-----GKRCGFVQF 317
IF+ LD ++ + L F +G ++ K+ K GFVQ+
Sbjct: 212 -IFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMDDIGQSKGFGFVQY 257
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 28/201 (13%)
Query: 67 DASSDGIR--SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVS 124
D SSD + ++++ +L + + +F G S V+ S +GF+ F S
Sbjct: 292 DNSSDKAKFNNVFVKNLSESTTKEDLIKVFSEYGTITSAVVMIGMDGK-SRCFGFVNFES 350
Query: 125 HAAAERVLQTFNGTQMPSTEQNFRLNWATYGA---GERRQDDGPDF-------------- 167
A R ++ NG ++ E W A ER D F
Sbjct: 351 PDDAARAVEELNGKKINDKE------WYVGRAQKKSEREMDLKRRFEQSMKDAADKYQGQ 404
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++ +L +TD L+E F + + + K++ D+ G SKG GFV F E +++T
Sbjct: 405 NLYLKNLDDGITDDQLRELF-SNFGKITSCKIMRDQN-GVSKGSGFVSFSTREEASQALT 462
Query: 228 EMNGVLCSTRPMRIGPAATKK 248
EMNG + S +P+ + A K+
Sbjct: 463 EMNGKMISGKPLYVAFAQRKE 483
>gi|384486188|gb|EIE78368.1| hypothetical protein RO3G_03072 [Rhizopus delemar RA 99-880]
Length = 499
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 121/258 (46%), Gaps = 25/258 (9%)
Query: 65 APDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVS 124
AP+++ SL++G+L P + E+ + +F G S +V R+ T S GY ++ F
Sbjct: 19 APESAPLASASLYVGELDPSVTEAMLFEMFNIIGPVSSIRVCRDAVTRRSLGYAYVNFHR 78
Query: 125 HAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQ 184
A AER L+T N + + ++ R+ W+ R+ ++G IF+ +L + L
Sbjct: 79 MADAERALETLNYSMIKG--RSCRIMWSQRDPSLRKGNNG---NIFIKNLDPSIDHKALH 133
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
+TF A + ++ K+ D G SKGYGFV + ++ +NG+L + R + +G
Sbjct: 134 DTFSA-FGNILSCKIAHDE-QGNSKGYGFVHYETLEAAESAIKSVNGMLLNDRKVFVGHH 191
Query: 245 ATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHV 304
++K + GE+ T I+V + VTD+ L +FG+YG +
Sbjct: 192 ISRK-------------ERESKLGESRVQFTNIYVKNIPFDVTDEELSQLFGKYGTITSC 238
Query: 305 KIP-----AGKRCGFVQF 317
I K GFV F
Sbjct: 239 VITRDDDGTSKGFGFVNF 256
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 118/258 (45%), Gaps = 29/258 (11%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+++I +L P ++ + F G +S K+ ++Q N S+GYGF+ + + AAE +++
Sbjct: 117 NIFIKNLDPSIDHKALHDTFSAFGNILSCKIAHDEQGN-SKGYGFVHYETLEAAESAIKS 175
Query: 135 FNGTQMPSTEQNFRLNWATYGAG--ERRQDDGPD---FT-IFVGDLAADVTDYVLQETFR 188
NG + N R + + ER G FT I+V ++ DVTD L + F
Sbjct: 176 VNGMLL-----NDRKVFVGHHISRKERESKLGESRVQFTNIYVKNIPFDVTDEELSQLF- 229
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK- 247
Y ++ V+T G SKG+GFV F + ++ +++ + + + A K
Sbjct: 230 GKYGTITSC-VITRDDDGTSKGFGFVNFEKHQDAQNAVDDLHKKDFRGQDLYVSRAQKKN 288
Query: 248 --KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
+ +QY++A + QG N ++V LD + DD L+ F YG + K
Sbjct: 289 EREEELRRQYEEAKLEKMSKYQGVN------LYVKNLDDDMDDDRLRDEFSVYGVITSAK 342
Query: 306 IPAGKRC------GFVQF 317
I ++ GFV F
Sbjct: 343 IMRDEKTNISRGFGFVCF 360
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 88/190 (46%), Gaps = 13/190 (6%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL-- 132
++++ ++ + + ++ +FG G S + R+ S+G+GF+ F H A+ +
Sbjct: 210 NIYVKNIPFDVTDEELSQLFGKYGTITSCVITRDDDGT-SKGFGFVNFEKHQDAQNAVDD 268
Query: 133 ---QTFNGTQM------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
+ F G + E+ L A + ++V +L D+ D L
Sbjct: 269 LHKKDFRGQDLYVSRAQKKNEREEELRRQYEEAKLEKMSKYQGVNLYVKNLDDDMDDDRL 328
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
++ F +VY + AK++ D T S+G+GFV F + R++TEMNG + ++P+ +
Sbjct: 329 RDEF-SVYGVITSAKIMRDEKTNISRGFGFVCFTSPEDATRAVTEMNGRIIGSKPIYVAI 387
Query: 244 AATKKAATGQ 253
A K+ Q
Sbjct: 388 AQRKEVRRSQ 397
>gi|94442922|emb|CAJ91135.1| oligouridylate binding protein [Platanus x acerifolia]
Length = 229
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 119/238 (50%), Gaps = 25/238 (10%)
Query: 97 TGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA 156
TG K+IR + ++ YGF+++ +A + T NG + Q ++NWA Y +
Sbjct: 1 TGPLEGCKLIRKENSS----YGFVDYFDRRSAALAILTLNGRHLFG--QAIKVNWA-YAS 53
Query: 157 GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRF 216
G+R +D F IFVGDL+ +VTD L +VY S A+V+ D+ TGRS+G+GFV F
Sbjct: 54 GQR-EDTSGHFNIFVGDLSPEVTDATLFACL-SVYPSCSDARVMWDQKTGRSRGFGFVSF 111
Query: 217 GDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ---KATYQNTQGSQG----- 268
++ + ++ ++ G +R +R AA A + K+ + T G+
Sbjct: 112 RNQQDAQSAINDLTGKWLGSRQIRCNWAAKGAGANDDKQNTDAKSVVELTSGTSEDGQET 171
Query: 269 ------ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQFA 318
EN+P TT++VG L P VT L F G V V++ K GFV+++
Sbjct: 172 INDDAPENNPQYTTVYVGNLAPEVTQLDLHRHFHALGAGVIEEVRVQRDKGFGFVRYS 229
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 76/172 (44%), Gaps = 37/172 (21%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++GDL P + ++ + + +V+ +++T S G+GF+ F + A+ +
Sbjct: 64 NIFVGDLSPEVTDATLFACLSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 123
Query: 135 FNGTQMPSTEQNFRLNWATYGAG-------------------------ERRQDDGPD--- 166
G + S + R NWA GAG E DD P+
Sbjct: 124 LTGKWLGSRQ--IRCNWAAKGAGANDDKQNTDAKSVVELTSGTSEDGQETINDDAPENNP 181
Query: 167 --FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRF 216
T++VG+LA +VT L F A+ GA V+ + R KG+GFVR+
Sbjct: 182 QYTTVYVGNLAPEVTQLDLHRHFHAL-----GAGVIEEVRVQRDKGFGFVRY 228
>gi|301756358|ref|XP_002914026.1| PREDICTED: polyadenylate-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 636
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 118/252 (46%), Gaps = 24/252 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S ++ R+K T S GY ++ +
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
+ER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 RDSERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
Query: 306 I---PAGKRCGF 314
+ +GK GF
Sbjct: 222 VMTDESGKSKGF 233
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|348517413|ref|XP_003446228.1| PREDICTED: polyadenylate-binding protein 4 [Oreochromis niloticus]
Length = 627
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 115/243 (47%), Gaps = 24/243 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + E+ + F G +S +V R+ T S GY ++ F A AER L T
Sbjct: 12 SLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALDT 71
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + + R+ W+ R+ G +F+ +L + + L +TF A + ++
Sbjct: 72 MNFDVVKG--KPIRIMWSQRDPSLRKSGVG---NVFIKNLDKSIDNKALYDTFSA-FGNI 125
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KVV D SKGY FV F + R++ +MNG+L + R + +G ++K +
Sbjct: 126 LSCKVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKR 311
KA T +++ + D+ LK +F +YG+ + VK+ P+GK
Sbjct: 184 GAKAK-------------EFTNVYIKNFGDDMDDERLKEIFDKYGKTLSVKVMTDPSGKS 230
Query: 312 CGF 314
GF
Sbjct: 231 RGF 233
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + IF G+ +S KV+ + + S G+GF+ + H
Sbjct: 185 AKAKEFTNVYIKNFGDDMDDERLKEIFDKYGKTLSVKVMTDP-SGKSRGFGFVSYEKHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A + ++ NGT++ E+ L + R +++ +L
Sbjct: 244 ANKAVEEMNGTELNGKTVFVGRAQKKMERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + S+ AKV+ + GRSKG+GFV F E +++TEMNG + +
Sbjct: 304 TIDDEKLRKEF-SPFGSITSAKVMLEE--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 237 RPMRIGPAATK---KAATGQQY 255
+P+ + A K KA QY
Sbjct: 361 KPLYVALAQRKEERKAHLTNQY 382
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 32/161 (19%)
Query: 165 PDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLR 224
P +++VGDL D+T+ +L E F V +V D T RS GY +V F ++ R
Sbjct: 9 PMASLYVGDLHPDITEAMLYEKFSPA-GPVLSIRVCRDMITRRSLGYAYVNFSQPADAER 67
Query: 225 SMTEMNGVLCSTRPMRI----GPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
++ MN + +P+RI + +K+ G +F+
Sbjct: 68 ALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVG-----------------------NVFIK 104
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIPA----GKRCGFVQF 317
LD S+ + L F +G ++ K+ K FV F
Sbjct: 105 NLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHF 145
>gi|119612224|gb|EAW91818.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_d [Homo
sapiens]
Length = 472
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 118/252 (46%), Gaps = 24/252 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
Query: 306 I---PAGKRCGF 314
+ +GK GF
Sbjct: 222 VMTDESGKSKGF 233
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 92/185 (49%), Gaps = 15/185 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H A++ +
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E+ L + R ++V +L + D L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T+P+ +
Sbjct: 311 RKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVAL 367
Query: 244 AATKK 248
A K+
Sbjct: 368 AQRKE 372
>gi|156357210|ref|XP_001624115.1| predicted protein [Nematostella vectensis]
gi|156210871|gb|EDO32015.1| predicted protein [Nematostella vectensis]
Length = 534
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 73/115 (63%), Gaps = 3/115 (2%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
+ +LW+GDL + +E+++AS F GE V S K+I+N+ T GY F++F A++V
Sbjct: 1 MSTLWMGDLDQFADEAFVASAFAAMGESVASVKMIKNRITGGPAGYCFVDFGDTGTAQKV 60
Query: 132 LQTFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQ 184
+ NG +P + + F+LNWATY G+ GP+F+IFVGDL DV D++LQ
Sbjct: 61 MSKLNGLPIPGSNPIKRFKLNWATYAYGKESTHQGPEFSIFVGDLTPDVNDHMLQ 115
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMR 240
V E F++ + S K AKVV D +G S+GYGFVRF DE E R+M EM G + C ++P+R
Sbjct: 370 VRTEFFQSRFPSCKAAKVVLD-ASGNSRGYGFVRFFDEKEHKRAMVEMQGAVGCGSKPIR 428
Query: 241 IGPA 244
+ A
Sbjct: 429 VSAA 432
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 14/137 (10%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++GDL + + F A+ SV K++ +R TG GY FV FGD + M+
Sbjct: 3 TLWMGDLDQFADEAFVASAFAAMGESVASVKMIKNRITGGPAGYCFVDFGDTGTAQKVMS 62
Query: 228 EMNGV-LCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSV 286
++NG+ + + P++ A G++ +T+Q + S IFVG L P V
Sbjct: 63 KLNGLPIPGSNPIKRFKLNWATYAYGKE---STHQGPEFS----------IFVGDLTPDV 109
Query: 287 TDDILKTVFGQYGELVH 303
D +L+ GE V+
Sbjct: 110 NDHMLQVRSHAPGERVN 126
>gi|94730404|sp|P20965.3|PABPA_XENLA RecName: Full=Polyadenylate-binding protein 1-A; Short=PABP-1-A;
Short=Poly(A)-binding protein 1-A; Short=xPABP1-A;
AltName: Full=Cytoplasmic poly(A)-binding protein 1-A
gi|30353795|gb|AAH52100.1| Pabpc1 protein [Xenopus laevis]
Length = 633
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 117/257 (45%), Gaps = 26/257 (10%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--RPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG+YG + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSVK 221
Query: 306 IPA-----GKRCGFVQF 317
+ K GFV F
Sbjct: 222 VMTDDNGKSKGFGFVSF 238
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 89/192 (46%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M + + +FG G +S KV+ + S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGK-SKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG M E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEFLP-FGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|414588969|tpg|DAA39540.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 281
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 129/251 (51%), Gaps = 29/251 (11%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL ++++ + +F G VS +V R+ + S GY ++ + + A R L+
Sbjct: 36 SLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALEL 95
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ ++ R+ G IF+ +L + + L +TF A + ++
Sbjct: 96 LNFT--PINGKPIRIMYSNRDPSSRKSGTG---NIFIKNLDKSIDNKALYDTFCA-FGNI 149
Query: 195 KGAKVVTDRTTGRSKGYGFVRF-GDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
K+ TD +G S+GYGFV+F DES Q ++ ++NG+L + + + +GP K
Sbjct: 150 LSCKIATD-PSGESRGYGFVQFEKDESAQ-SAIDKLNGMLINDKKVFVGPFVRK------ 201
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL---VHVKIPAGK 310
Q ++ N + S ++V L +VTDD LK +FG+YG + V ++ GK
Sbjct: 202 QDRENVSSNIKFSN---------VYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGK 252
Query: 311 -RC-GFVQFAN 319
RC GFV F N
Sbjct: 253 SRCFGFVNFEN 263
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 83/177 (46%), Gaps = 17/177 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P + G +++I +L ++ + F G +S K+ + S GYGF++F
Sbjct: 115 PSSRKSGTGNIFIKNLDKSIDNKALYDTFCAFGNILSCKIATDPSGE-SRGYGFVQFEKD 173
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD-----DGPDFT-IFVGDLAADVT 179
+A+ + NG + + G R+QD F+ ++V +L+ VT
Sbjct: 174 ESAQSAIDKLNGMLINDKK-------VFVGPFVRKQDRENVSSNIKFSNVYVKNLSDTVT 226
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMN-GVLCS 235
D L+E F Y ++ A V+ D + G+S+ +GFV F + +++ E+N GV+ S
Sbjct: 227 DDELKEMF-GKYGTITSAVVMRD-SDGKSRCFGFVNFENADAAAQAVQELNDGVVSS 281
>gi|64970|emb|CAA40721.1| polyA binding protein [Xenopus laevis]
Length = 633
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 117/257 (45%), Gaps = 26/257 (10%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--RPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG+YG + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSVK 221
Query: 306 IPA-----GKRCGFVQF 317
+ K GFV F
Sbjct: 222 VMTDDNGKSKGFGFVSF 238
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 89/192 (46%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M + + +FG G +S KV+ + S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGK-SKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG M E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEFLP-FGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|349803919|gb|AEQ17432.1| putative poly binding cytoplasmic 1 [Hymenochirus curtipes]
Length = 590
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 117/252 (46%), Gaps = 24/252 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG+YG + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKEMFGKYGPALSVK 221
Query: 306 I---PAGKRCGF 314
+ +GK GF
Sbjct: 222 VMTDDSGKSKGF 233
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 125/264 (47%), Gaps = 25/264 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G+ +++I +L ++ + F G +S KV+ ++ N S+GYGF+ F +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQ 148
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDD----GPDFT-IFVGDLAADVTD 180
AAER + NG + + ++ + + + R+ + +FT +++ + D+ D
Sbjct: 149 EAAERAIDKMNGMLL----NDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDD 204
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L+E F Y KV+TD +G+SKG+GFV F + +++ +MNG + + +
Sbjct: 205 ERLKEMF-GKYGPALSVKVMTD-DSGKSKGFGFVSFERHEDAQKAVDDMNGKDMNGKAIY 262
Query: 241 IGPA--ATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQY 298
+G A ++ +++++ QG N ++V LD + D+ L+ F +
Sbjct: 263 VGRAKKVERQTELKRKFEQMKQDRITRYQGVN------LYVKNLDDGIDDERLRKEFSPF 316
Query: 299 GELVHVKIPA----GKRCGFVQFA 318
G + K+ K GFV F+
Sbjct: 317 GTITSAKVMMEGGRSKGFGFVCFS 340
>gi|317106693|dbj|BAJ53194.1| JHL03K20.3 [Jatropha curcas]
Length = 642
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 134/267 (50%), Gaps = 28/267 (10%)
Query: 59 TQPYGVAPDASSDGIR-SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGY 117
+ P G+A + + + SL++GDL+ + E+ + +F G+ VS +V R+ + S GY
Sbjct: 13 SAPVGMASNGGNQFVSTSLYVGDLEQNVTETQLYDLFNQLGQIVSIRVCRDLTSRRSLGY 72
Query: 118 GFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAAD 177
G++ + + A + L+ N T P + R+ ++ R+ G I++ +L
Sbjct: 73 GYVNYNNVHDAAQALEVLNFT--PVNGKPIRIMYSYRDPTIRKSGAG---NIYIKNLDKA 127
Query: 178 VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTR 237
+ + L +TF A + ++ KV TD + G+S GYGFV+F +E ++ ++NG+L + +
Sbjct: 128 IDNKALHDTFSA-FGNILSCKVATD-SAGQSLGYGFVQFDNEESAKNAIDKLNGMLLNDK 185
Query: 238 PMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+ +GP ++ + G + ++V L + T++ LK +FG+
Sbjct: 186 QVYVGPFLRRQ---------------ERESGTDKTKFNNVYVKNLSETTTEEDLKKIFGE 230
Query: 298 YGEL---VHVKIPAGK-RC-GFVQFAN 319
YG + V ++ GK RC GFV F N
Sbjct: 231 YGAITSAVVMRDGDGKSRCFGFVNFEN 257
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 121/267 (45%), Gaps = 30/267 (11%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S KV + S GYGF++F +
Sbjct: 109 PTIRKSGAGNIYIKNLDKAIDNKALHDTFSAFGNILSCKVATDSAGQ-SLGYGFVQFDNE 167
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD--DGPDFT----IFVGDLAADVT 179
+A+ + NG + + G RRQ+ G D T ++V +L+ T
Sbjct: 168 ESAKNAIDKLNGMLLNDKQ-------VYVGPFLRRQERESGTDKTKFNNVYVKNLSETTT 220
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
+ L++ F Y ++ A V+ D G+S+ +GFV F + + RS+ +NG +
Sbjct: 221 EEDLKKIF-GEYGAITSAVVMRD-GDGKSRCFGFVNFENPDDAARSVEALNGKTFDEKEW 278
Query: 240 RIGPAATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFG 296
+G A K + Q+++ + +G N ++V LD S+TDD LK +F
Sbjct: 279 YVGKAQKKSEREVELKGQFEQTLKETVDKFEGLN------LYVKNLDDSITDDKLKELFS 332
Query: 297 QYGELVHVKI---PAG--KRCGFVQFA 318
++G + K+ P G K GFV ++
Sbjct: 333 EFGTITSCKVMRDPNGVSKGSGFVAYS 359
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 14/185 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L E + IFG G S V+R+ S +GF+ F + A R ++
Sbjct: 209 NVYVKNLSETTTEEDLKKIFGEYGAITSAVVMRDGDGK-SRCFGFVNFENPDDAARSVEA 267
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG +E+ L + D ++V +L +TD L
Sbjct: 268 LNGKTFDEKEWYVGKAQKKSEREVELKGQFEQTLKETVDKFEGLNLYVKNLDDSITDDKL 327
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+E F + + ++ KV+ D G SKG GFV + E +++TEMNG + ++P+ +
Sbjct: 328 KELF-SEFGTITSCKVMRD-PNGVSKGSGFVAYSTAEEASKALTEMNGKMIVSKPLYVAL 385
Query: 244 AATKK 248
A K+
Sbjct: 386 AQRKE 390
>gi|166786|gb|AAA32832.1| poly(A)-binding protein [Arabidopsis thaliana]
Length = 668
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 123/250 (49%), Gaps = 26/250 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + ES++ +F + +V R+ T+ S GY ++ F + A R +++
Sbjct: 46 SLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRD-LTHRSLGYAYVNFANPEDASRAMES 104
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N P ++ R+ + R G +F+ +L A + + L ETF + + ++
Sbjct: 105 LNYA--PIRDRPIRIMLSNRDPSTRLSGKG---NVFIKNLDASIDNKALYETFSS-FGTI 158
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV D GRSKGYGFV+F E ++ ++NG+L + + + +G +
Sbjct: 159 LSCKVAMD-VVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRR------- 210
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL---VHVKIPAG-- 309
Q+ S+ P+ T ++V L +TDD LK FG+YG++ V +K +G
Sbjct: 211 ------QDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNS 264
Query: 310 KRCGFVQFAN 319
+ GFV F +
Sbjct: 265 RSFGFVNFVS 274
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 88/187 (47%), Gaps = 18/187 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L + + + FG G+ S V++++ N S +GF+ FVS AA ++
Sbjct: 226 NVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGN-SRSFGFVNFVSPEAAAVAVEK 284
Query: 135 FNGTQM-------------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDY 181
NG + E+ R + + G + +++ +L V D
Sbjct: 285 MNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSN--LYLKNLDDSVNDE 342
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
L+E F + Y +V KV+ + + G S+G+GFV + + E L +M EMNG + +P+ +
Sbjct: 343 KLKEMF-SEYGNVTSCKVMMN-SQGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYV 400
Query: 242 GPAATKK 248
A K+
Sbjct: 401 ALAQRKE 407
>gi|148232824|ref|NP_001080204.1| polyadenylate-binding protein 1-A [Xenopus laevis]
gi|623598|gb|AAA60936.1| poly(A)-binding protein [Xenopus laevis]
Length = 633
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 117/257 (45%), Gaps = 26/257 (10%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--RPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG+YG + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSVK 221
Query: 306 IPA-----GKRCGFVQF 317
+ K GFV F
Sbjct: 222 VMTDDNGKSKGFGFVSF 238
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 88/192 (45%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M + + +FG G +S KV+ + S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGK-SKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + G M E+ L + R ++V +L
Sbjct: 244 AQKAVDEMYGKDMNGKSMFVGRAQKKVERQTELKRKFEQMNQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEFLP-FGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|281350417|gb|EFB26001.1| hypothetical protein PANDA_001865 [Ailuropoda melanoleuca]
Length = 640
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 119/253 (47%), Gaps = 22/253 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S ++ R+K T S GY ++ +
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDF-TIFVGDLAADVTDYVLQ 184
A+R L+T N + + R+ W+ R+ G IF+ +L + + L
Sbjct: 63 VDAKRALETLNFDVIKG--RPVRIMWSQRDPSLRKSGVGGGVGNIFIKNLDKSIDNKALY 120
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
+TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 121 DTFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRF 177
Query: 245 ATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHV 304
++K + G T +++ + D+ LK +FG++G + V
Sbjct: 178 KSRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSV 224
Query: 305 KI---PAGKRCGF 314
K+ +GK GF
Sbjct: 225 KVMTDESGKSKGF 237
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 189 ARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 247
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 248 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 307
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 308 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 364
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 365 KPLYVALAQRKE 376
>gi|334183839|ref|NP_177322.2| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|334183841|ref|NP_001185373.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|322510110|sp|Q05196.3|PABP5_ARATH RecName: Full=Polyadenylate-binding protein 5; Short=PABP-5;
Short=Poly(A)-binding protein 5
gi|332197109|gb|AEE35230.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|332197110|gb|AEE35231.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
Length = 682
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 123/250 (49%), Gaps = 26/250 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + ES++ +F + +V R+ T+ S GY ++ F + A R +++
Sbjct: 60 SLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRD-LTHRSLGYAYVNFANPEDASRAMES 118
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N P ++ R+ + R G +F+ +L A + + L ETF + + ++
Sbjct: 119 LN--YAPIRDRPIRIMLSNRDPSTRLSGKG---NVFIKNLDASIDNKALYETFSS-FGTI 172
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV D GRSKGYGFV+F E ++ ++NG+L + + + +G +
Sbjct: 173 LSCKVAMD-VVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRR------- 224
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL---VHVKIPAG-- 309
Q+ S+ P+ T ++V L +TDD LK FG+YG++ V +K +G
Sbjct: 225 ------QDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNS 278
Query: 310 KRCGFVQFAN 319
+ GFV F +
Sbjct: 279 RSFGFVNFVS 288
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 88/187 (47%), Gaps = 18/187 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L + + + FG G+ S V++++ N S +GF+ FVS AA ++
Sbjct: 240 NVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGN-SRSFGFVNFVSPEAAAVAVEK 298
Query: 135 FNGTQM-------------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDY 181
NG + E+ R + + G + +++ +L V D
Sbjct: 299 MNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSN--LYLKNLDDSVNDE 356
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
L+E F + Y +V KV+ + + G S+G+GFV + + E L +M EMNG + +P+ +
Sbjct: 357 KLKEMF-SEYGNVTSCKVMMN-SQGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYV 414
Query: 242 GPAATKK 248
A K+
Sbjct: 415 ALAQRKE 421
>gi|7239504|gb|AAF43230.1|AC012654_14 Identical to the polyadenylate-binding protein 5 (PAB5) from
Arabidopsis thaliana gb|M97657 [Arabidopsis thaliana]
Length = 668
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 123/250 (49%), Gaps = 26/250 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + ES++ +F + +V R+ T+ S GY ++ F + A R +++
Sbjct: 46 SLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRD-LTHRSLGYAYVNFANPEDASRAMES 104
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N P ++ R+ + R G +F+ +L A + + L ETF + + ++
Sbjct: 105 LNYA--PIRDRPIRIMLSNRDPSTRLSGKG---NVFIKNLDASIDNKALYETFSS-FGTI 158
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV D GRSKGYGFV+F E ++ ++NG+L + + + +G +
Sbjct: 159 LSCKVAMD-VVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRR------- 210
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL---VHVKIPAG-- 309
Q+ S+ P+ T ++V L +TDD LK FG+YG++ V +K +G
Sbjct: 211 ------QDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNS 264
Query: 310 KRCGFVQFAN 319
+ GFV F +
Sbjct: 265 RSFGFVNFVS 274
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 88/187 (47%), Gaps = 18/187 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L + + + FG G+ S V++++ N S +GF+ FVS AA ++
Sbjct: 226 NVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGN-SRSFGFVNFVSPEAAAVAVEK 284
Query: 135 FNGTQM-------------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDY 181
NG + E+ R + + G + +++ +L V D
Sbjct: 285 MNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSN--LYLKNLDDSVNDE 342
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
L+E F + Y +V KV+ + + G S+G+GFV + + E L +M EMNG + +P+ +
Sbjct: 343 KLKEMF-SEYGNVTSCKVMMN-SQGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYV 400
Query: 242 GPAATKK 248
A K+
Sbjct: 401 ALAQRKE 407
>gi|409082274|gb|EKM82632.1| hypothetical protein AGABI1DRAFT_111221 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 671
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 122/275 (44%), Gaps = 32/275 (11%)
Query: 43 PPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVS 102
PP P P PP AP AS+ SL++G+L P + E+ + IF G S
Sbjct: 20 PPSVPVPAPYNPP---------APQASTAPSASLYVGELDPTVTEAMLFEIFNMIGPVAS 70
Query: 103 GKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD 162
+V R+ T S GY ++ +++ A ER L+ N + + + R+ W+ R+
Sbjct: 71 IRVCRDAVTRRSLGYAYVNYLNAADGERALEQLNYSLI--KNRACRIMWSQRDPALRKTG 128
Query: 163 DGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
G +F+ +L + + L +TF A + +V KV TD GRSKGYGFV +
Sbjct: 129 QG---NVFIKNLDEAIDNKALHDTFVA-FGNVLSCKVATDE-HGRSKGYGFVHYETAEAA 183
Query: 223 LRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGL 282
++ +NG+L + + + +G ++K Q E T +++ L
Sbjct: 184 DNAIKSVNGMLLNDKKVYVGHHISRK-------------ERQSKLDEMKAQFTNLYIKNL 230
Query: 283 DPSVTDDILKTVFGQYGELVHVKIPA---GKRCGF 314
D VT + +F +YG + + GK GF
Sbjct: 231 DTEVTQEEFTELFTRYGNVTSSLVATDEEGKSKGF 265
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 85/201 (42%), Gaps = 15/201 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+L+I +L + + +F G S V +++ S+G+GF+ + H A+R +
Sbjct: 224 NLYIKNLDTEVTQEEFTELFTRYGNVTSSLVATDEEGK-SKGFGFVNYERHEEAQRAVDE 282
Query: 135 FNGTQMP-----------STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
+ T + E+ L + A + +++ +L D D L
Sbjct: 283 LHDTDLKGKKLFVARAQKKAEREDELRRSYEQAKLEKLSKYQGINLYIKNLEDDFDDDKL 342
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F + ++ KV+ D G SKG+GFV F E +++ EMN + T+P+ +
Sbjct: 343 RAEFEP-FGAITSCKVMRDEK-GTSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYVS- 399
Query: 244 AATKKAATGQQYQKATYQNTQ 264
A ++ QQ + Q Q
Sbjct: 400 LAQRREVRRQQLESQIAQRNQ 420
>gi|118101731|ref|XP_417821.2| PREDICTED: polyadenylate-binding protein 4 [Gallus gallus]
Length = 630
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 116/249 (46%), Gaps = 24/249 (9%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
SS + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F A A
Sbjct: 6 SSYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADA 65
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
ER L T N + + R+ W+ R+ G +F+ +L + + L +TF
Sbjct: 66 ERALDTMNFDVIKG--KPIRIMWSQRDPSLRKSGVG---NVFIKNLDKSIDNKALYDTFS 120
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
A + ++ KVV D SKGY FV F + R++ +MNG+L + R + +G ++K
Sbjct: 121 A-FGNILSCKVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRK 177
Query: 249 AATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI-- 306
+ G T +++ + D+ LK +F +YG+ + VK+
Sbjct: 178 -------------EREAELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMT 224
Query: 307 -PAGKRCGF 314
P GK GF
Sbjct: 225 DPTGKSKGF 233
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 18/202 (8%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +F G+ +S KV+ + T S+G+GF+ F H
Sbjct: 185 AKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDP-TGKSKGFGFVSFEKHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A + ++ NG + E+ L + R +++ +L
Sbjct: 244 ANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRRFEQLKQERISRYQGVNLYIKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + S+ AKV+ + GRSKG+GFV F E +++TEMNG + +
Sbjct: 304 TIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 237 RPMRIGPAATK---KAATGQQY 255
+P+ + A K KA QY
Sbjct: 361 KPLYVALAQRKEERKAHLTNQY 382
>gi|426200105|gb|EKV50029.1| hypothetical protein AGABI2DRAFT_190442 [Agaricus bisporus var.
bisporus H97]
Length = 673
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 122/275 (44%), Gaps = 32/275 (11%)
Query: 43 PPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVS 102
PP P P PP AP AS+ SL++G+L P + E+ + IF G S
Sbjct: 20 PPSVPVPAPYNPP---------APQASTAPSASLYVGELDPTVTEAMLFEIFNMIGPVAS 70
Query: 103 GKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD 162
+V R+ T S GY ++ +++ A ER L+ N + + + R+ W+ R+
Sbjct: 71 IRVCRDAVTRRSLGYAYVNYLNAADGERALEQLNYSLI--KNRACRIMWSQRDPALRKTG 128
Query: 163 DGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
G +F+ +L + + L +TF A + +V KV TD GRSKGYGFV +
Sbjct: 129 QG---NVFIKNLDEAIDNKALHDTFVA-FGNVLSCKVATDE-HGRSKGYGFVHYETAEAA 183
Query: 223 LRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGL 282
++ +NG+L + + + +G ++K Q E T +++ L
Sbjct: 184 DNAIKSVNGMLLNDKKVYVGHHISRK-------------ERQSKLDEMKAQFTNLYIKNL 230
Query: 283 DPSVTDDILKTVFGQYGELVHVKIPA---GKRCGF 314
D VT + +F +YG + + GK GF
Sbjct: 231 DTEVTQEEFTELFTRYGNVTSSLVATDEEGKSKGF 265
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 85/201 (42%), Gaps = 15/201 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+L+I +L + + +F G S V +++ S+G+GF+ + H A+R +
Sbjct: 224 NLYIKNLDTEVTQEEFTELFTRYGNVTSSLVATDEEGK-SKGFGFVNYERHEEAQRAVDE 282
Query: 135 FNGTQMP-----------STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
+ T + E+ L + A + +++ +L D D L
Sbjct: 283 LHDTDLKGKKLFVARAQKKAEREDELRRSYEQAKLEKLSKYQGVNLYIKNLEDDFDDDKL 342
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F + ++ KV+ D G SKG+GFV F E +++ EMN + T+P+ +
Sbjct: 343 RAEFEP-FGAITSCKVMRDEK-GTSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYVS- 399
Query: 244 AATKKAATGQQYQKATYQNTQ 264
A ++ QQ + Q Q
Sbjct: 400 LAQRREVRRQQLESQIAQRNQ 420
>gi|357465579|ref|XP_003603074.1| Poly(A)-binding protein [Medicago truncatula]
gi|355492122|gb|AES73325.1| Poly(A)-binding protein [Medicago truncatula]
Length = 622
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 121/248 (48%), Gaps = 27/248 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL + +S + +F G+ VS ++ R+ + S GYG++ F + A + +
Sbjct: 25 SLYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQSLGYGYVNFSNPHDAAKAMDV 84
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ ++ R+ IF+ +L + L +TF +++ ++
Sbjct: 85 LNFT--PLNNKPIRIMYSHRDPSVRKSGAA---NIFIKNLDRAIDHKALYDTF-SIFGNI 138
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
K+ D +G SKGYGFV+F +E ++ ++NG+L + +P+ +G
Sbjct: 139 LSCKIAMD-ASGLSKGYGFVQFENEESAQSAIDKLNGMLLNDKPVYVG-----------H 186
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL----VHVKIPAGK 310
+Q+ Q+ + NN ++V L SVTDD LK FG+YG + V +
Sbjct: 187 FQRK--QDRDNALSNAKFNN--VYVKNLSESVTDDDLKNTFGEYGTITSAVVMRDVDGKS 242
Query: 311 RC-GFVQF 317
+C GFV F
Sbjct: 243 KCFGFVNF 250
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 120/267 (44%), Gaps = 30/267 (11%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S K+ + + S+GYGF++F +
Sbjct: 104 PSVRKSGAANIFIKNLDRAIDHKALYDTFSIFGNILSCKIAMDA-SGLSKGYGFVQFENE 162
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT------IFVGDLAADVT 179
+A+ + NG + G +R+QD + ++V +L+ VT
Sbjct: 163 ESAQSAIDKLNGMLLNDKP-------VYVGHFQRKQDRDNALSNAKFNNVYVKNLSESVT 215
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
D L+ TF Y ++ A V+ D G+SK +GFV F + ++ +NG +
Sbjct: 216 DDDLKNTF-GEYGTITSAVVMRD-VDGKSKCFGFVNFENADAAAEAVEALNGKKFDDKEW 273
Query: 240 RIGPAATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFG 296
+G A K + ++++++ + G N +++ LD SVTD+ L +F
Sbjct: 274 YVGKALKKYERELELKERHEQSMKETVDKFYGAN------LYLKNLDDSVTDEKLSELFS 327
Query: 297 QYGELVHVKI---PAG--KRCGFVQFA 318
++G + KI P G + GFV F+
Sbjct: 328 EFGTVTSCKILRDPQGISRGSGFVAFS 354
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 87/191 (45%), Gaps = 14/191 (7%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S+ ++++ +L + + + + FG G S V+R+ S+ +GF+ F + AA
Sbjct: 198 SNAKFNNVYVKNLSESVTDDDLKNTFGEYGTITSAVVMRDVDGK-SKCFGFVNFENADAA 256
Query: 129 ERVLQTFNGTQ-----------MPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAAD 177
++ NG + + E+ L + + D +++ +L
Sbjct: 257 AEAVEALNGKKFDDKEWYVGKALKKYERELELKERHEQSMKETVDKFYGANLYLKNLDDS 316
Query: 178 VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTR 237
VTD L E F + + +V K++ D G S+G GFV F E R++ EMNG + + +
Sbjct: 317 VTDEKLSELF-SEFGTVTSCKILRD-PQGISRGSGFVAFSTPEEATRALAEMNGKMVAGK 374
Query: 238 PMRIGPAATKK 248
P+ + PA K+
Sbjct: 375 PLYVAPAQKKE 385
>gi|366990603|ref|XP_003675069.1| hypothetical protein NCAS_0B06140 [Naumovozyma castellii CBS 4309]
gi|342300933|emb|CCC68698.1| hypothetical protein NCAS_0B06140 [Naumovozyma castellii CBS 4309]
Length = 443
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 56 SQQTQPYGVAPDASSDG-----IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQ 110
S + Q V P +++ G R L++G+L + E + F G+ K++ +K+
Sbjct: 60 SAENQESSVVPASATQGGRETSDRVLYVGNLDKSINEDLLKQYFQVGGQITDVKIMVDKK 119
Query: 111 TNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIF 170
N + Y FIE++ A LQT NG Q+ + R+NWA DD F +F
Sbjct: 120 NN-NVNYAFIEYLKSHDANVALQTLNGIQIEG--KTVRINWAFQSQQTTNSDDT--FNLF 174
Query: 171 VGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMN 230
VGDL DV D L F S V+ A V+ D TGRS+GYGFV F D+ + +M M
Sbjct: 175 VGDLNVDVDDETLSHAFDQFPSYVQ-AHVMWDMQTGRSRGYGFVSFADQEQAQEAMNVMQ 233
Query: 231 GVLCSTRPMRIGPAATKK 248
G+ + R +RI A ++
Sbjct: 234 GMPINGRAVRINWATKRE 251
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 235 STRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTV 294
S P+ PAA +++A Q+ TQG + +D ++VG LD S+ +D+LK
Sbjct: 46 SADPVSEAPAAGEQSAENQESSVVPASATQGGRETSD---RVLYVGNLDKSINEDLLKQY 102
Query: 295 FGQYGELVHVKIPAGKRCGFVQFA 318
F G++ VKI K+ V +A
Sbjct: 103 FQVGGQITDVKIMVDKKNNNVNYA 126
>gi|449302325|gb|EMC98334.1| hypothetical protein BAUCODRAFT_86883 [Baudoinia compniacensis UAMH
10762]
Length = 802
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 119/266 (44%), Gaps = 28/266 (10%)
Query: 61 PYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFI 120
P AP + SL++G+L P + E+ + +F G+ S +V R+ T S GY ++
Sbjct: 48 PTSAAPSTAHPNSASLYVGELDPSVTEAMLFELFSSVGQVASIRVCRDAVTRRSLGYAYV 107
Query: 121 EFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTD 180
+ S ER L+ N T + + R+ W+ R+ G +F+ +L + +
Sbjct: 108 NYNSANDGERALEELNYTLIKG--RPCRIMWSQRDPALRKTGHG---NVFIKNLDGAIDN 162
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L +TF A + ++ KV D G SKGYGFV + +++ +NG+L + + +
Sbjct: 163 KALHDTF-AAFGNILSCKVAVDE-LGNSKGYGFVHYETAEAASQAIKSVNGMLLNEKKVF 220
Query: 241 IGPAATKKAATGQ-QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
+G KK + + KA + T I+V ++ VTDD + +F +YG
Sbjct: 221 VGHHIPKKDRMSKFEEMKANF--------------TNIYVKNIETEVTDDEFRELFEKYG 266
Query: 300 ELVHVKIPAGKRC------GFVQFAN 319
E+ + GFV + N
Sbjct: 267 EITSASLAHDNETGKSRGFGFVNYIN 292
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 115/245 (46%), Gaps = 12/245 (4%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S KV ++ N S+GYGF+ + +
Sbjct: 141 PALRKTGHGNVFIKNLDGAIDNKALHDTFAAFGNILSCKVAVDELGN-SKGYGFVHYETA 199
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQ 184
AA + +++ NG + + + + ++ +FT I+V ++ +VTD +
Sbjct: 200 EAASQAIKSVNGMLLNEKKVFVGHHIPKKDRMSKFEEMKANFTNIYVKNIETEVTDDEFR 259
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
E F Y + A + D TG+S+G+GFV + + + +++ E+N + + +G A
Sbjct: 260 ELFEK-YGEITSASLAHDNETGKSRGFGFVNYINHEDAYKAVDELNDSDFHGQKLYVGRA 318
Query: 245 ATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
K + +QY+ A + + QG N ++V L V D+ L+ +F YG +
Sbjct: 319 QKKHEREEELRKQYEAARQEKSAKYQGVN------LYVKNLADEVDDEELRKIFEAYGAI 372
Query: 302 VHVKI 306
K+
Sbjct: 373 TSAKV 377
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 62/141 (43%), Gaps = 12/141 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +++ + + +F GE S + + +T S G+GF+ +++H A + +
Sbjct: 243 NIYVKNIETEVTDDEFRELFEKYGEITSASLAHDNETGKSRGFGFVNYINHEDAYKAVDE 302
Query: 135 FN-----------GTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
N G E+ L A + + ++V +LA +V D L
Sbjct: 303 LNDSDFHGQKLYVGRAQKKHEREEELRKQYEAARQEKSAKYQGVNLYVKNLADEVDDEEL 362
Query: 184 QETFRAVYSSVKGAKVVTDRT 204
++ F A Y ++ AKV+ D T
Sbjct: 363 RKIFEA-YGAITSAKVMRDVT 382
>gi|225678061|gb|EEH16345.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 755
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 120/265 (45%), Gaps = 26/265 (9%)
Query: 61 PYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFI 120
P AP + SL++G+L P + E+ + +F G+ S +V R+ T S GY ++
Sbjct: 41 PNSAAPTNAQPHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYV 100
Query: 121 EFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTD 180
+ + A ER L+ N T + + R+ W+ R+ G +F+ +L + +
Sbjct: 101 NYNNTADGERALEDLNYTLIKG--KPCRIMWSQRDPALRKTGQG---NVFIKNLDTAIDN 155
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L +TF A + ++ KV D G SKGYGFV + ++ +NG+L + + +
Sbjct: 156 KALHDTF-AAFGNILSCKVAQDE-FGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVF 213
Query: 241 IGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGE 300
+G KK + Q E N T ++V L+P VT++ + +F +YGE
Sbjct: 214 VGHHIAKK-------------DRQSKFEEMKANFTNVYVKNLEPEVTNEEFRELFEKYGE 260
Query: 301 LVHVKIP------AGKRCGFVQFAN 319
+ + + GFV F N
Sbjct: 261 ITSASLSRDNETGKSRGFGFVNFVN 285
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 112/245 (45%), Gaps = 12/245 (4%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S KV +++ N S+GYGF+ + +
Sbjct: 134 PALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETA 192
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQ 184
AA ++ NG + + + A + ++ +FT ++V +L +VT+ +
Sbjct: 193 EAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNLEPEVTNEEFR 252
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
E F Y + A + D TG+S+G+GFV F + ++ ++N + + +G A
Sbjct: 253 ELFEK-YGEITSASLSRDNETGKSRGFGFVNFVNHDSAAAAVEDLNDKEYKGQKLYVGRA 311
Query: 245 ATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
K + +Q++ A + QG N ++V L + D+ L+ +F +G +
Sbjct: 312 QKKHEREEELRKQHEAARVEKASKYQGVN------LYVKNLTDDIDDEKLRDLFIGFGNI 365
Query: 302 VHVKI 306
++
Sbjct: 366 TSARV 370
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 93/253 (36%), Gaps = 65/253 (25%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L+P + +F GE S + R+ +T S G+GF+ FV+H +A ++
Sbjct: 236 NVYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNETGKSRGFGFVNFVNHDSAAAAVED 295
Query: 135 FN-----------GTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
N G E+ L A + ++V +L D+ D L
Sbjct: 296 LNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQGVNLYVKNLTDDIDDEKL 355
Query: 184 QETFRAVYSSVKGAKVV------------------------------------------- 200
++ F + ++ A+V+
Sbjct: 356 RDLFIG-FGNITSARVMRDTIGDAGSESEKEKEASKDNKENVREETKKEAGGEDSAEKTD 414
Query: 201 ----------TDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
TD+ G+SKG+GFV F + E +++TEMN + + +P+ + A K
Sbjct: 415 KAEKPDTKKPTDKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMVNGKPLYVALAQRKDVR 474
Query: 251 TGQQYQKATYQNT 263
Q +NT
Sbjct: 475 KSQLEASIQARNT 487
>gi|403290728|ref|XP_003936459.1| PREDICTED: polyadenylate-binding protein 1-like [Saimiri
boliviensis boliviensis]
Length = 614
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 124/258 (48%), Gaps = 28/258 (10%)
Query: 67 DASSDG--IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVS 124
+AS G + SL++GDL P + E+ + F G +S +V R+ T S GY +I F
Sbjct: 2 NASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGSILSIRVCRDVATRRSLGYAYINFQQ 61
Query: 125 HAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQ 184
A AER L T N + Q R+ W+ G R+ G IF+ +L + + L
Sbjct: 62 PADAERALDTMNFEMLKG--QPIRIMWSQRDPGLRKSGVG---NIFIKNLEDSIDNKALY 116
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
+TF + + ++ KVV D S+G+GFV F +++ MNG+L + R + +G
Sbjct: 117 DTF-STFGNILSCKVVCDEHG--SRGFGFVHFETYEAAQQAINTMNGMLLNDRKVFVGHF 173
Query: 245 ATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHV 304
+++ + +A T I+V L V + L+ +F Q+G+++ V
Sbjct: 174 KSRRERAAELGARAL-------------EFTNIYVKNLPADVDEQGLQDLFSQFGKMLSV 220
Query: 305 KI---PAGK-RC-GFVQF 317
K+ +G+ RC GFV F
Sbjct: 221 KVMRDSSGRSRCFGFVNF 238
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 97/200 (48%), Gaps = 28/200 (14%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L ++E + +F G+ +S KV+R+ + S +GF+ F H A++ +
Sbjct: 192 NIYVKNLPADVDEQGLQDLFSQFGKMLSVKVMRDS-SGRSRCFGFVNFEKHEEAQKAVVH 250
Query: 135 FNGTQMPSTEQNFRLNWATYGAG--ERRQDDGPDF--------------TIFVGDLAADV 178
NG ++ RL +A+ ER+ + F ++V +L +
Sbjct: 251 MNGKEVSG-----RLLYASRAQKRVERQNELKRRFEQMKQDRLSRYQGVNLYVKNLDDSI 305
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
D L++ F + Y + AKV+T+ + SKG+GFV F E +++TEMNG + T+P
Sbjct: 306 DDGKLRKEF-SPYGVITSAKVMTEGS--HSKGFGFVCFSSPEEATKAVTEMNGRIVGTKP 362
Query: 239 MRIGPAATK---KAATGQQY 255
+ + A K KA QY
Sbjct: 363 LYVALAQRKEERKAILTNQY 382
>gi|389586343|dbj|GAB69072.1| polyadenylate-binding protein, partial [Plasmodium cynomolgi strain
B]
Length = 883
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 119/248 (47%), Gaps = 27/248 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL + E+ + IF G S +V R+ T S GY ++ + + A AER L T
Sbjct: 17 SLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALDT 76
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T + Q RL W+ R+ G IFV +L + + L +TF +++ ++
Sbjct: 77 LNYTNIKG--QPARLMWSHRDPSLRKSGAG---NIFVKNLDKSIDNKALFDTF-SMFGNI 130
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV TD G+SK YGFV + DE ++ ++NG+ ++ + +G K
Sbjct: 131 LSCKVATDE-FGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYVGHFIKKS------ 183
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA---GKR 311
++AT ND T ++V SVT+ LK +F YGE+ + + ++
Sbjct: 184 -ERAT----------NDTKFTNLYVKNFPDSVTETHLKELFSPYGEITSMIVKTDNKNRK 232
Query: 312 CGFVQFAN 319
F+ +A+
Sbjct: 233 FCFINYAD 240
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++ +L + D L+E F Y ++ AKV+ D +SKG+GFV F + E +++T
Sbjct: 450 NLYIKNLDDAIDDQTLKELFEP-YGTITSAKVMRDDKE-QSKGFGFVCFALQEEANKAVT 507
Query: 228 EMNGVLCSTRPMRIGPAATKK 248
EM+ + + +P+ +G A ++
Sbjct: 508 EMHLKIINGKPLYVGLAEKRE 528
>gi|149240785|ref|XP_001526223.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450346|gb|EDK44602.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 601
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 11/214 (5%)
Query: 42 PPPVGWTPQPVPPPSQ-QTQPYGVAPDASSDGIRS-----LWIGDLQPWMEESYIASIFG 95
P G P P +Q +++ VAP ++ +G R L++G+L E I IF
Sbjct: 62 PSSTGSCPSPKESETQLESEESTVAPASAVNGGREISNKILYVGNLAKSASEEQINEIFS 121
Query: 96 HTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG 155
+ + N + Y FIEF AE+ L + NG + ++ ++NWA
Sbjct: 122 SVSNPIKSIKLLNDKNKLGFNYAFIEFNESEDAEKALNSLNGKDVNGSD--IKVNWAYQS 179
Query: 156 AGER--RQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGF 213
A + P + IFVGDL+++V D L++ F + S+K A V+ D T RS+GYGF
Sbjct: 180 AAIAGGSTPEEPSYNIFVGDLSSEVNDEALKKAFTK-FGSLKQAHVMWDMQTSRSRGYGF 238
Query: 214 VRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
V FG + + ++ MNG R +R A+ K
Sbjct: 239 VTFGKQEDAENALQSMNGEWLGGRAIRCNWASHK 272
>gi|296200520|ref|XP_002747628.1| PREDICTED: polyadenylate-binding protein 1-like [Callithrix
jacchus]
Length = 614
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 121/258 (46%), Gaps = 28/258 (10%)
Query: 67 DASSDG--IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVS 124
+AS G + SL++GDL P + E+ + F G +S +V R+ T S GY +I F
Sbjct: 2 NASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGSILSIRVCRDVATRRSLGYAYINFQQ 61
Query: 125 HAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQ 184
A AER L T N + Q R+ W+ G R+ G IF+ +L + + L
Sbjct: 62 PADAERALDTMNFEMLKG--QPIRIMWSQRDPGLRKSGVG---NIFIKNLEDSIDNKALY 116
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
+TF + + ++ KV D+ S+G+GFV F +++ MNG+L + R + +G
Sbjct: 117 DTF-STFGNILSCKVACDKHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHF 173
Query: 245 ATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHV 304
+++ + +A T I+V L V + L+ +F Q+G+++ V
Sbjct: 174 KSRRERAAELGARAL-------------EFTNIYVKNLPADVDEQGLQDLFSQFGKMLSV 220
Query: 305 KI----PAGKRC-GFVQF 317
K+ RC GFV F
Sbjct: 221 KVMRDNSGRSRCFGFVNF 238
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 124/268 (46%), Gaps = 30/268 (11%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G+ +++I +L+ ++ + F G +S KV +K S G+GF+ F +H
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDKHG--SRGFGFVHFETH 148
Query: 126 AAAERVLQTFNGTQMPSTE------QNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADV 178
AA++ + T NG + + ++ R A GA +FT I+V +L ADV
Sbjct: 149 EAAQQAINTMNGMLLNDRKVFVGHFKSRRERAAELGA------RALEFTNIYVKNLPADV 202
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
+ LQ+ F + + + KV+ D +GRS+ +GFV F E +++ MNG S R
Sbjct: 203 DEQGLQDLF-SQFGKMLSVKVMRD-NSGRSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRL 260
Query: 239 M---RIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVF 295
+ R ++ +++++ QG N ++V LD S+ DD L+ F
Sbjct: 261 LYASRAQKRVERQNELKRKFEQMKQDRLSRYQGVN------LYVKNLDDSIDDDKLRKEF 314
Query: 296 GQYGELVHVKI----PAGKRCGFVQFAN 319
YG + K+ K GFV F++
Sbjct: 315 SPYGVITSAKVMTEGSHSKGFGFVCFSS 342
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 97/200 (48%), Gaps = 28/200 (14%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L ++E + +F G+ +S KV+R+ + S +GF+ F H A++ +
Sbjct: 192 NIYVKNLPADVDEQGLQDLFSQFGKMLSVKVMRD-NSGRSRCFGFVNFEKHEEAQKAVVH 250
Query: 135 FNGTQMPSTEQNFRLNWATYGAG--ERRQDDGPDF--------------TIFVGDLAADV 178
NG ++ RL +A+ ER+ + F ++V +L +
Sbjct: 251 MNGKEVSG-----RLLYASRAQKRVERQNELKRKFEQMKQDRLSRYQGVNLYVKNLDDSI 305
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
D L++ F + Y + AKV+T+ + SKG+GFV F E +++TEMNG + T+P
Sbjct: 306 DDDKLRKEF-SPYGVITSAKVMTEGS--HSKGFGFVCFSSPEEATKAVTEMNGRIVGTKP 362
Query: 239 MRIGPAATK---KAATGQQY 255
+ + A K KA QY
Sbjct: 363 LYVALAQRKEERKAILTNQY 382
>gi|449547299|gb|EMD38267.1| hypothetical protein CERSUDRAFT_113433 [Ceriporiopsis subvermispora
B]
Length = 679
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 114/247 (46%), Gaps = 25/247 (10%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
L++G+L P + E+ + IF G S +V R+ T S GY ++ +++ A ER L+
Sbjct: 50 LYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQL 109
Query: 136 NGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVK 195
N + + + R+ W+ R+ G IF+ +L + + L +TF A + +V
Sbjct: 110 NYSLIKG--RACRIMWSQRDPALRKTGQG---NIFIKNLDEGIDNKALHDTF-AAFGNVL 163
Query: 196 GAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQY 255
KV TD GRSKGYGFV + ++ +NG+L + + + +GP ++K
Sbjct: 164 SCKVATDE-HGRSKGYGFVHYETAEAADTAIKAVNGMLLNDKKVYVGPHISRK------- 215
Query: 256 QKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP-----AGK 310
Q E T ++V +D VTD+ + +F Q+G + I K
Sbjct: 216 ------ERQSKIEEMKAQFTNVYVKNIDAEVTDEEFRQLFEQFGNVTSAVIQRDEEGRSK 269
Query: 311 RCGFVQF 317
GFV F
Sbjct: 270 GFGFVNF 276
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 93/201 (46%), Gaps = 15/201 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ ++ + + +F G V+ VI+ + S+G+GF+ F H A++ +++
Sbjct: 230 NVYVKNIDAEVTDEEFRQLFEQFGN-VTSAVIQRDEEGRSKGFGFVNFEKHEEAQKGVES 288
Query: 135 F-----NGTQMPST------EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG ++ T E+ L + A + +++ +L +V D L
Sbjct: 289 LHDFELNGKKLFVTRAQKKAEREEELRKSYEQAKNEKLSKYQGVNLYIKNLEDEVDDERL 348
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
++ F + ++ AKV+ D G SKG+GFV F E +++ EMN + T+P+ +
Sbjct: 349 RQEFEP-FGTITSAKVMRDEK-GSSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYVS- 405
Query: 244 AATKKAATGQQYQKATYQNTQ 264
A ++ QQ + Q Q
Sbjct: 406 LAQRREVRRQQLESQIAQRNQ 426
>gi|123374542|ref|XP_001297747.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121878039|gb|EAX84817.1| hypothetical protein TVAG_508040 [Trichomonas vaginalis G3]
Length = 364
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 117/237 (49%), Gaps = 20/237 (8%)
Query: 76 LWIGDLQPWM-EESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
LW+G+ W EES ++ + TG+ S ++K T YGF+ F S A V++
Sbjct: 4 LWVGNTVIWKDEESLMSDVKQMTGKQPKSCWFAKDKSTGTHLNYGFLVFASKNNAAEVIR 63
Query: 134 TFNGTQMPSTEQN-FRLNW--ATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
NGT++P++ N F+L W T+ + F+ +VG L + V + L E F+
Sbjct: 64 LLNGTEVPNSNGNKFKLGWGNTTFESDADTIAKAEGFSCYVGGLPSSVKESELLEFFKRY 123
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
+ + A+++ D G SKGYGF++F E + ++ +N V P+++
Sbjct: 124 FPNAINARLIRDEK-GNSKGYGFIKFNKHQEVIDAIQTLNNVNFKGHPLKV--------K 174
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT-DDILKTVFGQYGELVHVKI 306
G Q + +T +N D NTT+F+ +DP V ++ L F QYG ++ VKI
Sbjct: 175 EGTQNRVSTNENNSL-----DVKNTTLFITNIDPDVVKEETLLQNFHQYGNVLSVKI 226
>gi|452843390|gb|EME45325.1| hypothetical protein DOTSEDRAFT_71152 [Dothistroma septosporum
NZE10]
Length = 785
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 118/258 (45%), Gaps = 25/258 (9%)
Query: 61 PYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFI 120
P AP ++ SL++G+L P + E+ + +F G+ S +V R+ T S GY ++
Sbjct: 43 PTSAAPSNANPNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYV 102
Query: 121 EFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTD 180
+ S ER L+ N T + + R+ W+ R+ G +F+ +L + +
Sbjct: 103 NYNSANDGERALEELNYTLIKG--KPCRIMWSQRDPALRKTGQG---NVFIKNLDGAIDN 157
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L +TF A + ++ KV D G SKGYGFV + ++ +NG+L + + +
Sbjct: 158 KALHDTF-AAFGNILSCKVAQDE-HGNSKGYGFVHYETAEAANSAIKSVNGMLLNEKKVF 215
Query: 241 IGPAATKKAATGQ-QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
+G KK + + KA + T I+V +DP TDD + +F +YG
Sbjct: 216 VGHHIPKKDRMSKFEEMKANF--------------TNIYVKNIDPEATDDEFRALFEKYG 261
Query: 300 ELVHVKIP---AGKRCGF 314
++ + GK GF
Sbjct: 262 DITSASLAHDQEGKSRGF 279
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 112/239 (46%), Gaps = 19/239 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+++I +L ++ + F G +S KV +++ N S+GYGF+ + + AA +++
Sbjct: 145 NVFIKNLDGAIDNKALHDTFAAFGNILSCKVAQDEHGN-SKGYGFVHYETAEAANSAIKS 203
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQETFRAV--- 190
NG + + + + ++ +FT I+V ++ + TD + FRA+
Sbjct: 204 VNGMLLNEKKVFVGHHIPKKDRMSKFEEMKANFTNIYVKNIDPEATD----DEFRALFEK 259
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK--- 247
Y + A + D+ G+S+G+GFV + + +++ E+N + + +G A K
Sbjct: 260 YGDITSASLAHDQE-GKSRGFGFVNYIRHEDANKAVEELNNSDFKGQALYVGRAQKKHER 318
Query: 248 KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
+ +QY+ + + QG N ++V L + DD L+ +F YG + K+
Sbjct: 319 EEELRKQYEAQRQEKSAKYQGVN------LYVKNLADEIDDDELRKIFEPYGAITSAKV 371
>gi|295674319|ref|XP_002797705.1| polyadenylate-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280355|gb|EEH35921.1| polyadenylate-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 822
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 121/265 (45%), Gaps = 26/265 (9%)
Query: 61 PYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFI 120
P AP + SL++G+L P + E+ + +F G+ S +V R+ T S GY ++
Sbjct: 41 PNSAAPTNAQPHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYV 100
Query: 121 EFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTD 180
+ + A ER L+ N T + + R+ W+ R+ G +F+ +L + +
Sbjct: 101 NYNNTADGERALEDLNYTLIKG--KPCRIMWSQRDPALRKTGQG---NVFIKNLDTAIDN 155
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L +TF A + ++ KV D G SKGYGFV + ++ +NG+L + + +
Sbjct: 156 KALHDTF-AAFGNILSCKVAQDE-FGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVF 213
Query: 241 IGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGE 300
+G KK + Q E N T ++V L+P VT++ + +F +YGE
Sbjct: 214 VGHHIAKK-------------DRQSKFEEMKANFTNVYVKNLEPEVTNEEFRELFEKYGE 260
Query: 301 LVHVKIP----AGKR--CGFVQFAN 319
+ + GK GFV F N
Sbjct: 261 ITSASLSRDNETGKSRGFGFVNFVN 285
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 112/245 (45%), Gaps = 12/245 (4%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S KV +++ N S+GYGF+ + +
Sbjct: 134 PALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETA 192
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQ 184
AA ++ NG + + + A + ++ +FT ++V +L +VT+ +
Sbjct: 193 EAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNLEPEVTNEEFR 252
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
E F Y + A + D TG+S+G+GFV F + ++ ++N + + +G A
Sbjct: 253 ELFEK-YGEITSASLSRDNETGKSRGFGFVNFVNHDSAAAAVEDLNDKEYKGQKLYVGRA 311
Query: 245 ATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
K + +Q++ A + QG N ++V L + D+ L+ +F +G +
Sbjct: 312 QKKHEREEELRKQHEAARVEKASKYQGVN------LYVKNLTDDIDDEKLRDLFIGFGNI 365
Query: 302 VHVKI 306
++
Sbjct: 366 TSARV 370
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 93/253 (36%), Gaps = 65/253 (25%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L+P + +F GE S + R+ +T S G+GF+ FV+H +A ++
Sbjct: 236 NVYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNETGKSRGFGFVNFVNHDSAAAAVED 295
Query: 135 FN-----------GTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
N G E+ L A + ++V +L D+ D L
Sbjct: 296 LNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQGVNLYVKNLTDDIDDEKL 355
Query: 184 QETFRAVYSSVKGAKVV------------------------------------------- 200
++ F + ++ A+V+
Sbjct: 356 RDLFIG-FGNITSARVMRDTIGDAGSESEKEKEASKDNKENVKEETKKEAGGEDSAEKTD 414
Query: 201 ----------TDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
TD+ G+SKG+GFV F + E +++TEMN + + +P+ + A K
Sbjct: 415 KAEKPDTKKPTDKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMVNGKPLYVALAQRKDVR 474
Query: 251 TGQQYQKATYQNT 263
Q +NT
Sbjct: 475 KSQLEASIQARNT 487
>gi|119569772|gb|EAW49387.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_c [Homo sapiens]
Length = 336
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 105/203 (51%), Gaps = 5/203 (2%)
Query: 117 YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
Y F+EF H A L NG ++ E ++NWAT + +++ D F +FVGDL+
Sbjct: 11 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSP 67
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
++T ++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G
Sbjct: 68 EITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGG 126
Query: 237 RPMRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVF 295
R +R A K A + T Q + ++ P N T++ GG+ +TD +++ F
Sbjct: 127 RQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTF 186
Query: 296 GQYGELVHVKIPAGKRCGFVQFA 318
+G+++ +++ K FV+F+
Sbjct: 187 SPFGQIMEIRVFPEKGYSFVRFS 209
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 60 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 119
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDG---------------PDFTIFVGDLAADV 178
G + + R NWAT A + Q++ + T++ G +A+ +
Sbjct: 120 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 177
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 178 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 223
>gi|41388837|gb|AAH65540.1| PABPC4 protein [Homo sapiens]
Length = 631
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 117/250 (46%), Gaps = 24/250 (9%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
ASS + SL++GDL + E+ + F G +S +V R+ T S GY ++ F A
Sbjct: 5 ASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPAD 64
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
AER L T N + + R+ W+ R+ G +F+ +L + + VL +TF
Sbjct: 65 AERALDTMNFDVIKG--KPIRIMWSQRDPSLRKSGVG---NVFIKNLDKSIDNKVLYDTF 119
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
A + ++ KVV D SKGY FV F + +++ +MNG+L + R + +G ++
Sbjct: 120 SA-FGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 248 KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI- 306
K + G T +++ V D+ LK +F Q+G+ + VK+
Sbjct: 177 K-------------EREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVM 223
Query: 307 --PAGKRCGF 314
P GK GF
Sbjct: 224 RDPNGKSKGF 233
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + +++ + +F G+ +S KV+R+ S+G+GF+ + H
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGK-SKGFGFVSYEKHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A + ++ NG ++ E+ L + R +++ +L
Sbjct: 244 ANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + S+ AKV+ + GRSKG+GFV F E +++TEMNG + +
Sbjct: 304 TIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 237 RPMRIGPAATK---KAATGQQY 255
+P+ + A K KA QY
Sbjct: 361 KPLYVALAQRKEERKAHLTNQY 382
>gi|196009388|ref|XP_002114559.1| hypothetical protein TRIADDRAFT_28438 [Trichoplax adhaerens]
gi|190582621|gb|EDV22693.1| hypothetical protein TRIADDRAFT_28438 [Trichoplax adhaerens]
Length = 292
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 114/251 (45%), Gaps = 24/251 (9%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFN 136
+IG+L E I +F G K+I N + YGF+E+ +A R L N
Sbjct: 8 YIGNLDRQTTEQSIGELFAKFGAIKRCKLITEHGGN--DPYGFVEYAEKNSAARALDAMN 65
Query: 137 GTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKG 196
G S + ++NWAT + D + IFVGDL+ D+ +L+ F + V
Sbjct: 66 GYSFGS--RAIKVNWAT---NSSMRKDTNHYHIFVGDLSPDIDTTLLRSAFNQ-FGHVSD 119
Query: 197 AKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ 256
A+VV D TG+ +GYGFV + + E +M MNG R +R A K AT +
Sbjct: 120 ARVVKDSATGKPRGYGFVSYQFKHEAENAMQSMNGAWLGGRNIRTNWATRKPGATTNR-- 177
Query: 257 KATYQNTQGSQGEN----------DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
QN+ S ++ N T++VG L T++ L+ +F +G + +++
Sbjct: 178 ----QNSDSSSTKSLNYDEIYLQTAVYNCTVYVGNLSAGTTEETLRRIFIPFGPIADIRV 233
Query: 307 PAGKRCGFVQF 317
K F+++
Sbjct: 234 FPDKNYAFIRY 244
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 77/176 (43%), Gaps = 29/176 (16%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P ++ + + S F G +V+++ T GYGF+ + AE +Q+
Sbjct: 93 IFVGDLSPDIDTTLLRSAFNQFGHVSDARVVKDSATGKPRGYGFVSYQFKHEAENAMQSM 152
Query: 136 NGTQMPSTEQNFRLNWATY--GAGERRQDDGP------------------DFTIFVGDLA 175
NG + +N R NWAT GA RQ+ + T++VG+L+
Sbjct: 153 NGAWLGG--RNIRTNWATRKPGATTNRQNSDSSSTKSLNYDEIYLQTAVYNCTVYVGNLS 210
Query: 176 ADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
A T+ L+ F + + +V D K Y F+R+ ++ ++G
Sbjct: 211 AGTTEETLRRIF-IPFGPIADIRVFPD------KNYAFIRYMSHDHATNAIVVIHG 259
>gi|441599875|ref|XP_004087575.1| PREDICTED: nucleolysin TIAR isoform 2 [Nomascus leucogenys]
gi|441599878|ref|XP_003255076.2| PREDICTED: nucleolysin TIAR isoform 1 [Nomascus leucogenys]
gi|119569773|gb|EAW49388.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_d [Homo sapiens]
Length = 353
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 105/203 (51%), Gaps = 5/203 (2%)
Query: 117 YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
Y F+EF H A L NG ++ E ++NWAT + +++ D F +FVGDL+
Sbjct: 28 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSP 84
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
++T ++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G
Sbjct: 85 EITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGG 143
Query: 237 RPMRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVF 295
R +R A K A + T Q + ++ P N T++ GG+ +TD +++ F
Sbjct: 144 RQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTF 203
Query: 296 GQYGELVHVKIPAGKRCGFVQFA 318
+G+++ +++ K FV+F+
Sbjct: 204 SPFGQIMEIRVFPEKGYSFVRFS 226
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 77 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 136
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDG---------------PDFTIFVGDLAADV 178
G + + R NWAT A + Q++ + T++ G +A+ +
Sbjct: 137 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 194
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 195 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 240
>gi|115477976|ref|NP_001062583.1| Os09g0115400 [Oryza sativa Japonica Group]
gi|46389987|dbj|BAD16229.1| putative poly(A)-binding protein [Oryza sativa Japonica Group]
gi|113630816|dbj|BAF24497.1| Os09g0115400 [Oryza sativa Japonica Group]
gi|125562753|gb|EAZ08133.1| hypothetical protein OsI_30396 [Oryza sativa Indica Group]
gi|125604734|gb|EAZ43770.1| hypothetical protein OsJ_28392 [Oryza sativa Japonica Group]
gi|169244485|gb|ACA50516.1| poly(A)-binding protein [Oryza sativa Japonica Group]
gi|215695451|dbj|BAG90618.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 662
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 120/248 (48%), Gaps = 27/248 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL ++++ + +F G VS +V R+ T S GY ++ + S A A R L+
Sbjct: 41 SLYVGDLDVSVQDAQLFDVFAQVGGVVSVRVCRDVNTRRSLGYAYVNYSSPADAARALEM 100
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ ++ R+ IF+ +L + + L +TF V+ ++
Sbjct: 101 LNFT--PINGKPIRIMYSNRDPSLRKSGTA---NIFIKNLDKSIDNKALYDTF-CVFGNI 154
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV TD +G SKGYGFV++ + ++ ++NG+L + + + +GP K
Sbjct: 155 LSCKVATD-ASGESKGYGFVQYERDEAAQAAIDKLNGMLMNDKKVYVGPFIRK------- 206
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI----PAGK 310
Q S G+ NN ++V L + T+D LK +FG++G + +
Sbjct: 207 ------QERDNSPGQVKFNN--VYVKNLSENTTEDDLKEIFGKFGTITSAVVMREGDGRS 258
Query: 311 RC-GFVQF 317
+C GFV F
Sbjct: 259 KCFGFVNF 266
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 121/261 (46%), Gaps = 20/261 (7%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S KV + + S+GYGF+++
Sbjct: 120 PSLRKSGTANIFIKNLDKSIDNKALYDTFCVFGNILSCKVATDA-SGESKGYGFVQYERD 178
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPD----FTIFVGDLAADVTDY 181
AA+ + NG M N + + ++ +D+ P ++V +L+ + T+
Sbjct: 179 EAAQAAIDKLNGMLM-----NDKKVYVGPFIRKQERDNSPGQVKFNNVYVKNLSENTTED 233
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
L+E F + ++ A VV GRSK +GFV F + +++ E+NG + +
Sbjct: 234 DLKEIF-GKFGTITSA-VVMREGDGRSKCFGFVNFESPDDAAQAVQELNGKKFDDKEWYV 291
Query: 242 GPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
G A KK+ + ++ +N Q + + NT +++ LD SV DD L+ +F +YG +
Sbjct: 292 G-RAQKKSEREMELKEKFEKNLQ--EAADKYQNTNLYLKNLDDSVDDDKLRELFAEYGTI 348
Query: 302 VHVKIP-----AGKRCGFVQF 317
K+ + GFV F
Sbjct: 349 TSCKVMRDSNGVSRGSGFVAF 369
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 14/185 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L E + IFG G S V+R S+ +GF+ F S A + +Q
Sbjct: 220 NVYVKNLSENTTEDDLKEIFGKFGTITSAVVMREGDGR-SKCFGFVNFESPDDAAQAVQE 278
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG + +E+ L + D + +++ +L V D L
Sbjct: 279 LNGKKFDDKEWYVGRAQKKSEREMELKEKFEKNLQEAADKYQNTNLYLKNLDDSVDDDKL 338
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+E F A Y ++ KV+ D + G S+G GFV F + R++ EMN + ++P+ +
Sbjct: 339 RELF-AEYGTITSCKVMRD-SNGVSRGSGFVAFKSAEDASRALAEMNSKMVGSKPLYVAL 396
Query: 244 AATKK 248
A K+
Sbjct: 397 AQRKE 401
>gi|19526272|gb|AAL89666.1|AF411956_7 polyA-binding protein [Takifugu rubripes]
Length = 623
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 114/243 (46%), Gaps = 24/243 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + E+ + F G +S +V R+ T S GY ++ F A AER L T
Sbjct: 12 SLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALDT 71
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + + R+ W+ R+ G +F+ +L + + L +TF A + ++
Sbjct: 72 MNFDVVKG--KPIRIMWSQRDPSLRKSGVG---NVFIKNLDKSIDNKALYDTFSA-FGNI 125
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KVV D SKGY FV F + R++ +MNG+L + R + +G ++K +
Sbjct: 126 LSCKVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKR 311
KA T +++ + D+ LK +F +YG+ + VK+ P GK
Sbjct: 184 GAKAK-------------EFTNVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMDPTGKS 230
Query: 312 CGF 314
GF
Sbjct: 231 RGF 233
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +F G+ +S KV+ + T S G+GF+ + H
Sbjct: 185 AKAKEFTNVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMDP-TGKSRGFGFVSYEKHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A + ++ NGT++ E+ L + R +++ +L
Sbjct: 244 ANKAVEDMNGTELNGKTVFVGRAQKKNERQAELKRKFEMLKQERISRYQGVNLYIKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + S+ AKV+ + GRSKG+GFV F E +++TEMNG + +
Sbjct: 304 TIDDEKLRKEF-SPFGSITSAKVMLEE--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 237 RPMRIGPAATK---KAATGQQY 255
+P+ + A K KA QY
Sbjct: 361 KPLYVALAQRKEERKAHLTNQY 382
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 32/161 (19%)
Query: 165 PDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLR 224
P +++VGDL D+T+ +L E F V +V D T RS GY +V F ++ R
Sbjct: 9 PMASLYVGDLHPDITEAMLYEKFSPA-GPVLSIRVCRDMITRRSLGYAYVNFSQPADAER 67
Query: 225 SMTEMNGVLCSTRPMRI----GPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
++ MN + +P+RI + +K+ G +F+
Sbjct: 68 ALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVG-----------------------NVFIK 104
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIPA----GKRCGFVQF 317
LD S+ + L F +G ++ K+ K FV F
Sbjct: 105 NLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHF 145
>gi|388580130|gb|EIM20447.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 681
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 29/209 (13%)
Query: 67 DASSDGIRSLWIGDLQPWMEESYIASIFGHTG--EFVSGKVIRNKQTNFSE-GYGFIEFV 123
D +D R+++I +L M ESY+ + E + K +R QT+ + G+ F+ F
Sbjct: 11 DNEADVHRTIFI-ELDKVMSESYVRLLPALLSWPENTAVKYVRAMQTSTNNLGHAFVTFP 69
Query: 124 SHAAAERVLQTFNGTQMPSTEQNFRLNWATYG--------------AGERRQDDGPD--- 166
S A VL T N MP T + F+ +WA + R + P+
Sbjct: 70 SQQNALDVLSTVNKVSMPGTSRPFKADWAINAPHLIANPFTSTRSPLHDTRSSNSPEKLV 129
Query: 167 --FTIFVGDLAADVTDYVLQETFRAV------YSSVKGAKVVTDRTTGRSKGYGFVRFGD 218
F++FVGDL+ D T++ L F+ +++ K++TD TG S+ +GFVRF +
Sbjct: 130 NEFSVFVGDLSPDATEHDLMRAFQHPPNLSNPFTTCTNVKIMTDNATGSSRCFGFVRFSN 189
Query: 219 ESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
E E +R++ EM G+ + RP+R+ A K
Sbjct: 190 EDEMIRALDEMQGIPVAGRPIRLSTATPK 218
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
DP+NTT+FVGGL +++D L+ F +G + +VKIP GK CGFVQF +
Sbjct: 308 DPHNTTVFVGGLSSLISEDTLRVFFAPFGAITYVKIPPGKGCGFVQFVRK 357
>gi|327267754|ref|XP_003218664.1| PREDICTED: nucleolysin TIAR-like [Anolis carolinensis]
Length = 342
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 5/205 (2%)
Query: 117 YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
Y F+EF H A L NG ++ E ++NWAT + +++ D F +FVGDL+
Sbjct: 11 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSP 67
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
++T ++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G
Sbjct: 68 EITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGG 126
Query: 237 RPMRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVF 295
R +R A K A + T Q + ++ P N T++ GG+ +TD +++ F
Sbjct: 127 RQIRTNWATRKPPAPKTTQESTTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTF 186
Query: 296 GQYGELVHVKIPAGKRCGFVQFANR 320
+G+++ + GK FV+F+
Sbjct: 187 SPFGQILETRAFPGKGYSFVRFSTH 211
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 60 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 119
Query: 136 NGTQMPSTEQNFRLNWATYGAGERR-----------------QDDGPDFTIFVGDLAADV 178
G + + R NWAT + Q + T++ G +A+ +
Sbjct: 120 GGQWLGGRQ--IRTNWATRKPPAPKTTQESTTKQLRFEDVVNQSSPKNCTVYCGGIASGL 177
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF S G + T G KGY FVRF ++ +NG
Sbjct: 178 TDQLMRQTF-----SPFGQILETRAFPG--KGYSFVRFSTHESAAHAIVSVNG 223
>gi|224105583|ref|XP_002313862.1| predicted protein [Populus trichocarpa]
gi|222850270|gb|EEE87817.1| predicted protein [Populus trichocarpa]
Length = 642
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 121/250 (48%), Gaps = 27/250 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL+ + +S + +F G+ VS +V R+ + S GYG++ + + A R L+
Sbjct: 26 SLYVGDLEANVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPQDAARALEV 85
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P R+ ++ R+ G IF+ +L + L +TF +V+ ++
Sbjct: 86 LNFT--PVNGSPIRVMYSHRDPSVRKSGAG---NIFIKNLDKAIDHKALHDTF-SVFGNI 139
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV TD +G+SKGYGFV+F E +++ ++NG+L + + + +GP K Q+
Sbjct: 140 LSCKVATD-PSGQSKGYGFVQFDSEEAAQKAIEKLNGMLLNDKQVYVGPFLRK-----QE 193
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI----PAGK 310
AT + +FV L + ++ L FG++G + V +
Sbjct: 194 RDTAT----------DKTRFNNVFVKNLSETTAEEDLNKAFGEFGTITSVVVMRDGDGKS 243
Query: 311 RC-GFVQFAN 319
RC GFV F N
Sbjct: 244 RCFGFVNFEN 253
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 85/195 (43%), Gaps = 16/195 (8%)
Query: 67 DASSDGIR--SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVS 124
D ++D R ++++ +L E + FG G S V+R+ S +GF+ F +
Sbjct: 195 DTATDKTRFNNVFVKNLSETTAEEDLNKAFGEFGTITSVVVMRDGDGK-SRCFGFVNFEN 253
Query: 125 HAAAERVLQTFNGTQMPSTE-----------QNFRLNWATYGAGERRQDDGPDFTIFVGD 173
A + + NG + E + L + + D +++ +
Sbjct: 254 ADDAAKAAEALNGKKFDDKEWFVGKAQKKYEREVELKQRFEQSMKEAADKFQGANLYIKN 313
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
L + D ++E F + + ++ KV+ D G S+G GFV F E R++ EMNG +
Sbjct: 314 LDDSIGDEKIKELF-SPFGTITSCKVMRD-PNGISRGSGFVAFSTPEEASRALLEMNGKM 371
Query: 234 CSTRPMRIGPAATKK 248
+++P+ + A K+
Sbjct: 372 VASKPLYVALAQRKE 386
>gi|41152034|ref|NP_958453.1| polyadenylate-binding protein 4 [Danio rerio]
gi|31419252|gb|AAH53126.1| Poly(A) binding protein, cytoplasmic 4 (inducible form) [Danio
rerio]
Length = 637
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 117/253 (46%), Gaps = 24/253 (9%)
Query: 65 APDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVS 124
A A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 AATAGSYPMASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 62
Query: 125 HAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQ 184
A AER L T N + + R+ W+ R+ G +F+ +L + + L
Sbjct: 63 PADAERALDTMNFDVVKG--KPIRIMWSQRDPSLRKSGVG---NVFIKNLDKSIDNKALY 117
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
+TF A + ++ KVV D SKGY FV F + R++ +MNG+L + R + +G
Sbjct: 118 DTFSA-FGNILSCKVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRF 174
Query: 245 ATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHV 304
++K + KA T +++ + D LK +F +YG+ + V
Sbjct: 175 KSRKEREAEMGAKAK-------------EFTNVYIKNFGDDMDDQRLKELFDKYGKTLSV 221
Query: 305 KI---PAGKRCGF 314
K+ P GK GF
Sbjct: 222 KVMTDPTGKSRGF 234
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +F G+ +S KV+ + T S G+GF+ + H
Sbjct: 186 AKAKEFTNVYIKNFGDDMDDQRLKELFDKYGKTLSVKVMTDP-TGKSRGFGFVSYEKHED 244
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A + ++ NGT++ E+ L + R +++ +L
Sbjct: 245 ANKAVEEMNGTELNGKTVFVGRAQKKMERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 304
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + S+ AKV+ + GRSKG+GFV F E +++TEMNG + +
Sbjct: 305 TIDDEKLRKEF-SPFGSITSAKVMLEE--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 361
Query: 237 RPMRIGPAATK---KAATGQQY 255
+P+ + A K KA QY
Sbjct: 362 KPLYVALAQRKEERKAHLTNQY 383
>gi|452984370|gb|EME84127.1| hypothetical protein MYCFIDRAFT_202901 [Pseudocercospora fijiensis
CIRAD86]
Length = 715
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 119/262 (45%), Gaps = 25/262 (9%)
Query: 61 PYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFI 120
P AP ++ SL++G+L P + E+ + +F G+ S +V R+ T S GY ++
Sbjct: 42 PTSAAPTNANPNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYV 101
Query: 121 EFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTD 180
+ S A ER L+ N T + + R+ W+ R+ G +F+ +L A + +
Sbjct: 102 NYNSAADGERALEELNYTLIKG--KPCRIMWSQRDPALRKTGQG---NVFIKNLDAAIDN 156
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L +TF A + ++ KV D G SKGYGFV + +++ +NG+L + + +
Sbjct: 157 KALHDTF-AAFGNILSCKVAVDE-HGNSKGYGFVHYETSDAANQAIKSVNGMLLNEKKVF 214
Query: 241 IGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGE 300
+G KK + E N T I+V +D TDD + +F +YG+
Sbjct: 215 VGHHIPKK-------------DRMSKFEEMKANFTNIYVKNIDAETTDDEFRELFEKYGQ 261
Query: 301 -----LVHVKIPAGKRCGFVQF 317
L H + GFV F
Sbjct: 262 ITSASLAHDDQGKVRGFGFVNF 283
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 112/245 (45%), Gaps = 13/245 (5%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S KV ++ N S+GYGF+ + +
Sbjct: 135 PALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAVDEHGN-SKGYGFVHYETS 193
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQ 184
AA + +++ NG + + + + ++ +FT I+V ++ A+ TD +
Sbjct: 194 DAANQAIKSVNGMLLNEKKVFVGHHIPKKDRMSKFEEMKANFTNIYVKNIDAETTDDEFR 253
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
E F Y + A + D G+ +G+GFV F + +++ E+N + + + +G A
Sbjct: 254 ELFEK-YGQITSASLAHD-DQGKVRGFGFVNFIRHEDAAKAVDELNDLDFKGQKLYVGRA 311
Query: 245 ATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
K + +QY+ + + QG N ++V L + D+ L+ +F YG +
Sbjct: 312 QKKHEREEELRKQYEAQRQEKSAKYQGVN------LYVKNLADEIDDEELRKIFEPYGAI 365
Query: 302 VHVKI 306
K+
Sbjct: 366 TSAKV 370
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 43/246 (17%), Positives = 87/246 (35%), Gaps = 74/246 (30%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ ++ + +F G+ S + + Q G+GF+ F+ H A + +
Sbjct: 237 NIYVKNIDAETTDDEFRELFEKYGQITSASLAHDDQGKV-RGFGFVNFIRHEDAAKAVDE 295
Query: 135 FNGTQMP-------------STEQNFRLNWATYGAGERRQDDGPDF---TIFVGDLAADV 178
N E+ R + +RQ+ + ++V +LA ++
Sbjct: 296 LNDLDFKGQKLYVGRAQKKHEREEELRKQYEA-----QRQEKSAKYQGVNLYVKNLADEI 350
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRT---------------------------------- 204
D L++ F Y ++ AKV+ D T
Sbjct: 351 DDEELRKIFEP-YGAITSAKVMRDTTPLDKVEGAEKEDGEKKESESSAEDKEEEKKDDAD 409
Query: 205 -----------------TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
G+SKG+GFV F + E +++TE+N + ++P+ + A K
Sbjct: 410 ELAKKLDTVTIGGEKKVLGKSKGFGFVCFSNPDEATKAVTELNQKMIHSKPLYVALAQRK 469
Query: 248 KAATGQ 253
+ Q
Sbjct: 470 EVRKSQ 475
>gi|242041385|ref|XP_002468087.1| hypothetical protein SORBIDRAFT_01g039310 [Sorghum bicolor]
gi|241921941|gb|EER95085.1| hypothetical protein SORBIDRAFT_01g039310 [Sorghum bicolor]
Length = 654
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 113/249 (45%), Gaps = 28/249 (11%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
L++GDL + E ++ F G S +V R+ T+ S YG++ + S A A L
Sbjct: 44 LYVGDLHEDVAEEHLFDAFSKIGTVTSVRVCRDNATSRSLRYGYVNYFSRADAVMALDKL 103
Query: 136 NGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVK 195
N + + ++ R+ W+ RR G IFV +L V + LQE F + + V
Sbjct: 104 NHSLV--LDKPIRVMWSNRDPDARRSGVG---NIFVKNLNNSVDNASLQELF-SKFGDVL 157
Query: 196 GAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQY 255
KV + G S+GYGFV+F + ++ +NG L + R + +
Sbjct: 158 SCKVAKNE-DGTSRGYGFVQFASQESADEAIGNLNGSLFNDRKLHV-------------- 202
Query: 256 QKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKRC 312
AT+ ND T +++ LD +T++++K F Q+G +V VKI P G
Sbjct: 203 --ATFIKKSERSANNDDKFTNLYMKHLDDDITEELVKLKFSQFGPIVSVKIMRRPDGSSL 260
Query: 313 --GFVQFAN 319
GFV F N
Sbjct: 261 GFGFVSFQN 269
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 125/243 (51%), Gaps = 12/243 (4%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
PDA G+ ++++ +L ++ + + +F G+ +S KV +N+ S GYGF++F S
Sbjct: 122 PDARRSGVGNIFVKNLNNSVDNASLQELFSKFGDVLSCKVAKNEDGT-SRGYGFVQFASQ 180
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATY-GAGERRQDDGPDFT-IFVGDLAADVTDYVL 183
+A+ + NG S + +L+ AT+ ER ++ FT +++ L D+T+ ++
Sbjct: 181 ESADEAIGNLNG----SLFNDRKLHVATFIKKSERSANNDDKFTNLYMKHLDDDITEELV 236
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F + + + K++ R G S G+GFV F + +++ M+G+L ++ + +
Sbjct: 237 KLKF-SQFGPIVSVKIMR-RPDGSSLGFGFVSFQNPESAIKAQETMHGMLLGSKALYV-- 292
Query: 244 AATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVH 303
A +K +QY + ++ + ++ N + +++ + V DD L+ F +YG +
Sbjct: 293 ARAQKKEERKQYLQRLHEEKR-NEIITKSNESNVYIKNIHDEVDDDALRARFAEYGNITS 351
Query: 304 VKI 306
K+
Sbjct: 352 AKV 354
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 84/185 (45%), Gaps = 14/185 (7%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
+ D +L++ L + E + F G VS K++R + S G+GF+ F + +A
Sbjct: 215 NDDKFTNLYMKHLDDDITEELVKLKFSQFGPIVSVKIMR-RPDGSSLGFGFVSFQNPESA 273
Query: 129 ERVLQTFNGTQMPST--------EQNFRLNWATYGAGERRQD---DGPDFTIFVGDLAAD 177
+ +T +G + S ++ R + E+R + + +++ ++ +
Sbjct: 274 IKAQETMHGMLLGSKALYVARAQKKEERKQYLQRLHEEKRNEIITKSNESNVYIKNIHDE 333
Query: 178 VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTR 237
V D L+ F A Y ++ AKV+ D G S+G+GFV + E + M GV+ +
Sbjct: 334 VDDDALRARF-AEYGNITSAKVMRD-DKGISRGFGFVCYSTPEEAKSVVNSMRGVMFFGK 391
Query: 238 PMRIG 242
P+ +
Sbjct: 392 PLYVA 396
>gi|391336617|ref|XP_003742675.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Metaseiulus occidentalis]
Length = 318
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 109/207 (52%), Gaps = 20/207 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTG-EFVSGKVIR-NKQTNFSEGYGFIEFVSHAAAERVL 132
S+W+GD++P+M E +I + F G + ++ +++ NK + + Y FIE A R +
Sbjct: 32 SVWMGDVEPFMNEEFIRNQFTELGLKVINVRIMHSNKFQDQNLTYAFIELEDERTAIRTV 91
Query: 133 QTFNGTQMPST-EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
Q +N +P + F+LN+ ++ QD+ +FVG+L+ DV D +L TF+ Y
Sbjct: 92 QRYNDKPLPGDPRRKFKLNFTCQSQIKQAQDEN---GLFVGELSPDVDDLMLWSTFQERY 148
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKAA 250
SVK AKV+ D G SKG+GFV+F + E +++ EMNG + +R+ A K+
Sbjct: 149 PSVKWAKVIKDH-NGISKGFGFVKFNHDEEYNKALYEMNGYTGLGSNAIRVSVATPKERR 207
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTI 277
Q SQ ++PNN +
Sbjct: 208 NPQ------------SQWHSNPNNPMV 222
>gi|402882426|ref|XP_003904744.1| PREDICTED: polyadenylate-binding protein 1-like [Papio anubis]
Length = 614
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 120/258 (46%), Gaps = 28/258 (10%)
Query: 67 DASSDG--IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVS 124
+AS G + SL++GDL P + E+ + F G +S +V R+ T S GY +I F
Sbjct: 2 NASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQ 61
Query: 125 HAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQ 184
A AER L T N + Q R+ W+ G R+ G IF+ +L + + L
Sbjct: 62 PADAERALDTMNFEMLKG--QPIRIMWSQRDPGLRKSGVG---NIFIKNLEDSIDNKALY 116
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
+TF + + ++ KVV D S+G+GFV F +++ MNG+L + R + +G
Sbjct: 117 DTF-STFGNILSCKVVCDEHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHF 173
Query: 245 ATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHV 304
+++ + G T I+V L V + L+ +F Q+G+++ V
Sbjct: 174 KSRR-------------EREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSV 220
Query: 305 KI----PAGKRC-GFVQF 317
K+ RC GFV F
Sbjct: 221 KVMRDNSGHSRCFGFVNF 238
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 125/267 (46%), Gaps = 28/267 (10%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G+ +++I +L+ ++ + F G +S KV+ ++ S G+GF+ F +H
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHG--SRGFGFVHFETH 148
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD-----DGPDFT-IFVGDLAADVT 179
AA++ + T NG + N R + + R ++ +FT I+V +L DV
Sbjct: 149 EAAQQAINTMNGMLL-----NDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVD 203
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
+ LQ+ F + + + KV+ D +G S+ +GFV F E +++ MNG S R +
Sbjct: 204 EQGLQDLF-SQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLL 261
Query: 240 RIGPA---ATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFG 296
G A ++ +++++ + QG N ++V LD S+ DD L+ F
Sbjct: 262 YAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVN------LYVKNLDDSIDDDKLRKEFS 315
Query: 297 QYGELVHVKIPA----GKRCGFVQFAN 319
YG + K+ K GFV F++
Sbjct: 316 PYGVITSAKVMTEGGHSKGFGFVCFSS 342
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 97/195 (49%), Gaps = 18/195 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L ++E + +F G+ +S KV+R+ + S +GF+ F H A++ +
Sbjct: 192 NIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVH 250
Query: 135 FNGTQMP--------STEQNFRLNWATYGAGERRQDDGPDF---TIFVGDLAADVTDYVL 183
NG ++ + ++ R N + +QD + ++V +L + D L
Sbjct: 251 MNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKL 310
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
++ F + Y + AKV+T+ G SKG+GFV F E +++TEMNG + T+P+ +
Sbjct: 311 RKEF-SPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 367
Query: 244 AATK---KAATGQQY 255
A K KA QY
Sbjct: 368 AQRKEERKAILTNQY 382
>gi|355754577|gb|EHH58478.1| hypothetical protein EGM_08341 [Macaca fascicularis]
Length = 637
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 114/243 (46%), Gaps = 24/243 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + E+ + F G +S +V R+ T S Y ++ F AER L T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAERALDT 71
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + + R+ W+ RR G IFV +L + + VL +T A + ++
Sbjct: 72 MNFDVIKG--KPVRIMWSQRDPSLRRSGVG---NIFVKNLDKSINNKVLYDTVSA-FGNI 125
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KVV D SKGYGFV F R++ +MNG L + R + +G ++K +
Sbjct: 126 LSCKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFKSRKEREAE- 182
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKR 311
G++ + PN +++ + D+ LK +FG++G + VK+ +GK
Sbjct: 183 ---------LGAKAKEFPN---VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKS 230
Query: 312 CGF 314
GF
Sbjct: 231 KGF 233
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 92/185 (49%), Gaps = 15/185 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H A + +
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDARKAVDE 250
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E+ L + R ++V +L D+ D L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERL 310
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T+P+ +
Sbjct: 311 RKAF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVAL 367
Query: 244 AATKK 248
A K+
Sbjct: 368 AQRKE 372
>gi|109120204|ref|XP_001091129.1| PREDICTED: polyadenylate-binding protein 1 isoform 2 [Macaca
mulatta]
Length = 637
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 114/243 (46%), Gaps = 24/243 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + E+ + F G +S +V R+ T S Y ++ F AER L T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAERALDT 71
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + + R+ W+ RR G IFV +L + + VL +T A + ++
Sbjct: 72 MNFDVIKG--KPVRIMWSQRDPSLRRSGVG---NIFVKNLDKSINNKVLYDTVSA-FGNI 125
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KVV D SKGYGFV F R++ +MNG L + R + +G ++K +
Sbjct: 126 LSCKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFKSRKEREAE- 182
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKR 311
G++ + PN +++ + D+ LK +FG++G + VK+ +GK
Sbjct: 183 ---------LGAKAKEFPN---VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKS 230
Query: 312 CGF 314
GF
Sbjct: 231 KGF 233
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 93/185 (50%), Gaps = 15/185 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H A++ +
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E+ L + R ++V +L D+ D L
Sbjct: 251 MNGKELNGKHIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERL 310
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T+P+ +
Sbjct: 311 RKAF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVAL 367
Query: 244 AATKK 248
A K+
Sbjct: 368 AQRKE 372
>gi|47219550|emb|CAG09904.1| unnamed protein product [Tetraodon nigroviridis]
Length = 623
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 114/243 (46%), Gaps = 24/243 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + E+ + F G +S +V R+ T S GY ++ F A AER L T
Sbjct: 12 SLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALDT 71
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + + R+ W+ R+ G +F+ +L + + L +TF A + ++
Sbjct: 72 MNFDVVKG--KPIRIMWSQRDPSLRKSGVG---NVFIKNLDKSIDNKALYDTFSA-FGNI 125
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KVV D SKGY FV F + R++ +MNG+L + R + +G ++K +
Sbjct: 126 LSCKVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKR 311
KA T +++ + D+ LK +F +YG+ + VK+ P GK
Sbjct: 184 GAKAK-------------EFTNVYIKNFGDDMNDERLKELFDKYGKTLSVKVMTDPTGKS 230
Query: 312 CGF 314
GF
Sbjct: 231 RGF 233
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 18/202 (8%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M + + +F G+ +S KV+ + T S G+GFI + H
Sbjct: 185 AKAKEFTNVYIKNFGDDMNDERLKELFDKYGKTLSVKVMTDP-TGKSRGFGFISYEKHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A + ++ NGT++ E+ L + R +++ +L
Sbjct: 244 ANKAVEDMNGTELNGKTVFVGRAQKKMERQAELKRKFEMLKQERISRYQGVNLYIKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + S+ AKV+ + GRSKG+GFV F E +++TEMNG + +
Sbjct: 304 TIDDEKLRKEF-SPFGSITSAKVMLEE--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 237 RPMRIGPAATK---KAATGQQY 255
+P+ + A K KA QY
Sbjct: 361 KPLYVALAQRKEERKAHLTNQY 382
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 32/161 (19%)
Query: 165 PDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLR 224
P +++VGDL D+T+ +L E F V +V D T RS GY +V F ++ R
Sbjct: 9 PMASLYVGDLHPDITEAMLYEKFSPA-GPVLSIRVCRDMITRRSLGYAYVNFSQPADAER 67
Query: 225 SMTEMNGVLCSTRPMRI----GPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
++ MN + +P+RI + +K+ G +F+
Sbjct: 68 ALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVG-----------------------NVFIK 104
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIPA----GKRCGFVQF 317
LD S+ + L F +G ++ K+ K FV F
Sbjct: 105 NLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHF 145
>gi|168053933|ref|XP_001779388.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669186|gb|EDQ55778.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 650
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 123/248 (49%), Gaps = 27/248 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL+P + E+ + +F G+ VS +V R+ T S GY ++ + S A R L+
Sbjct: 29 SLYVGDLEPNVSEAQLYELFTQVGQVVSIRVCRDLITRRSLGYAYVNYNSAQDATRALEL 88
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + + R+ ++ R+ IF+ +L + + L +TF A + +
Sbjct: 89 LNFSVLNGNP--IRIMFSHRDPSIRKSGTA---NIFIKNLDKTIDNKALHDTFSA-FGGI 142
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV D +G+SKGYGFV+F E L ++ ++NG+L + + + +GP +
Sbjct: 143 LSCKVAVD-GSGQSKGYGFVQFEQEESALTAIEKVNGMLLNDKQVFVGPFVRR------- 194
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL---VHVKIPAGK- 310
Q S G + NN ++V L + T+D LK VFG YG + V ++ GK
Sbjct: 195 ------QERDQSGGVSKFNN--VYVKNLGENTTEDDLKNVFGAYGTISSAVVMRDSDGKS 246
Query: 311 RC-GFVQF 317
+C GFV F
Sbjct: 247 KCFGFVNF 254
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 85/185 (45%), Gaps = 14/185 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L E + ++FG G S V+R+ S+ +GF+ F A + ++
Sbjct: 208 NVYVKNLGENTTEDDLKNVFGAYGTISSAVVMRDSDGK-SKCFGFVNFEHPDNAAKAVEA 266
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG + +E+ L + R + +++ +L V D L
Sbjct: 267 LNGKKRDEKEWYVGRAQKKSEREAELRAKFEQERKERIEKYQGVNLYLKNLDDTVDDEKL 326
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+E F A Y ++ KV+ D G+S+G GFV F E R++TEMNG + ++P+ +
Sbjct: 327 RELF-ADYGTITSCKVMRD-PQGQSRGSGFVAFSSPEEATRAVTEMNGKMVGSKPLYVAL 384
Query: 244 AATKK 248
A K+
Sbjct: 385 AQRKE 389
>gi|41053728|ref|NP_957176.1| poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|37590406|gb|AAH59662.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|39645430|gb|AAH63948.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
Length = 634
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 115/252 (45%), Gaps = 24/252 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--RPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + DD LK +F +YG + ++
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDDKLKDIFSKYGNAMSIR 221
Query: 306 IPA---GKRCGF 314
+ GK GF
Sbjct: 222 VMTDENGKSRGF 233
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + IF G +S +V+ ++ S G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDDKLKDIFSKYGNAMSIRVMTDENGK-SRGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A+R + NG +M E+ L + R ++V +L
Sbjct: 244 AQRAVDEMNGKEMNGKLIYVGRAQKKVERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ D GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMMD--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|355563109|gb|EHH19671.1| Polyadenylate-binding protein 1-like protein [Macaca mulatta]
Length = 614
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 120/258 (46%), Gaps = 28/258 (10%)
Query: 67 DASSDG--IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVS 124
+AS G + SL++GDL P + E+ + F G +S +V R+ T S GY +I F
Sbjct: 2 NASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQ 61
Query: 125 HAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQ 184
A AER L T N + Q R+ W+ G R+ G IF+ +L + + L
Sbjct: 62 PADAERALDTMNFEMLKG--QPIRIMWSQRDPGLRKSGVG---NIFIKNLEDSIDNKALY 116
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
+TF + + ++ KVV D S+G+GFV F +++ MNG+L + R + +G
Sbjct: 117 DTF-STFGNILSCKVVCDEHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHF 173
Query: 245 ATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHV 304
+++ + G T I+V L V + L+ +F Q+G+++ V
Sbjct: 174 KSRR-------------EREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSV 220
Query: 305 KI----PAGKRC-GFVQF 317
K+ RC GFV F
Sbjct: 221 KVMRDNSGHSRCFGFVNF 238
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 125/267 (46%), Gaps = 28/267 (10%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G+ +++I +L+ ++ + F G +S KV+ ++ S G+GF+ F +H
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHG--SRGFGFVHFETH 148
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD-----DGPDFT-IFVGDLAADVT 179
AA++ + T NG + N R + + R ++ +FT I+V +L DV
Sbjct: 149 EAAQQAINTMNGMLL-----NDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVD 203
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
+ LQ+ F + + + KV+ D +G S+ +GFV F E +++ MNG S R +
Sbjct: 204 EQGLQDLF-SQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLL 261
Query: 240 RIGPA---ATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFG 296
G A ++ +++++ + QG N ++V LD S+ DD L+ F
Sbjct: 262 YAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVN------LYVKNLDDSIDDDKLRKEFS 315
Query: 297 QYGELVHVKIPA----GKRCGFVQFAN 319
YG + K+ K GFV F++
Sbjct: 316 PYGVITSAKVMTEGGHSKGFGFVCFSS 342
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 97/195 (49%), Gaps = 18/195 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L ++E + +F G+ +S KV+R+ + S +GF+ F H A++ +
Sbjct: 192 NIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVH 250
Query: 135 FNGTQMP--------STEQNFRLNWATYGAGERRQDDGPDF---TIFVGDLAADVTDYVL 183
NG ++ + ++ R N + +QD + ++V +L + D L
Sbjct: 251 MNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKL 310
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
++ F + Y + AKV+T+ G SKG+GFV F E +++TEMNG + T+P+ +
Sbjct: 311 RKEF-SPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 367
Query: 244 AATK---KAATGQQY 255
A K KA QY
Sbjct: 368 AQRKEERKAILTNQY 382
>gi|344255843|gb|EGW11947.1| Nucleolysin TIAR [Cricetulus griseus]
Length = 353
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 105/203 (51%), Gaps = 5/203 (2%)
Query: 117 YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
Y F+EF H A L NG ++ E ++NWAT + +++ D F +FVGDL+
Sbjct: 28 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSP 84
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
++T ++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G
Sbjct: 85 EITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGG 143
Query: 237 RPMRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVF 295
R +R A K A + T Q + ++ P N T++ GG+ +TD +++ F
Sbjct: 144 RQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTF 203
Query: 296 GQYGELVHVKIPAGKRCGFVQFA 318
+G+++ +++ K FV+F+
Sbjct: 204 SPFGQIMEIRVFPEKGYSFVRFS 226
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 77 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 136
Query: 136 NGTQMPSTEQNFRLNWATY-----------GAGERRQDDG------PDFTIFVGDLAADV 178
G + + R NWAT + R +D + T++ G +A+ +
Sbjct: 137 GGQWLGGRQ--IRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 194
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 195 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 240
>gi|357154719|ref|XP_003576878.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 653
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 121/251 (48%), Gaps = 33/251 (13%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL ++++ + +F G VS +V R+ T S GY ++ + + A A R L+
Sbjct: 35 SLYVGDLDMSVQDAQLFDVFAQIGGVVSVRVCRDVTTRKSLGYAYVNYNTPADAARALEM 94
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ ++ R+ IF+ +L + + L +TF V+ ++
Sbjct: 95 LNFT--PINGRPIRIMYSNRDPSLRKSGTA---NIFIKNLDKSIDNKALYDTF-CVFGNI 148
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV TD +G SKGYGFV++ + ++ ++NG+L + + + +GP K+
Sbjct: 149 LSCKVATD-ASGESKGYGFVQYERDEAAHAAIEKLNGMLMNDKKVYVGPFIRKQ------ 201
Query: 255 YQKATYQNTQGSQGENDPNNT---TIFVGGLDPSVTDDILKTVFGQYGELVHVKI----P 307
+ +N P N +FV L + T+D L+ +FG++G + V +
Sbjct: 202 ------------ERDNSPGNVKFNNVFVKNLSETTTEDDLREIFGKFGTITSVVVMREGD 249
Query: 308 AGKRC-GFVQF 317
+C GFV F
Sbjct: 250 GRSKCFGFVNF 260
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 119/261 (45%), Gaps = 20/261 (7%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S KV + + S+GYGF+++
Sbjct: 114 PSLRKSGTANIFIKNLDKSIDNKALYDTFCVFGNILSCKVATDA-SGESKGYGFVQYERD 172
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT----IFVGDLAADVTDY 181
AA ++ NG M N + + ++ +D+ P +FV +L+ T+
Sbjct: 173 EAAHAAIEKLNGMLM-----NDKKVYVGPFIRKQERDNSPGNVKFNNVFVKNLSETTTED 227
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
L+E F + ++ VV GRSK +GFV F E ++ ++NG + +
Sbjct: 228 DLREIF-GKFGTITSV-VVMREGDGRSKCFGFVNFESPDEAALAVQDLNGKKFDDKEWYV 285
Query: 242 GPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
G A KK+ + ++ +N Q + + NT +++ LD +V D+ L+ +F ++G +
Sbjct: 286 G-RAQKKSEREMELKEKFEKNLQ--ETADKYQNTNLYLKNLDDTVDDEKLRELFAEFGAI 342
Query: 302 VHVKIP-----AGKRCGFVQF 317
K+ A + GFV F
Sbjct: 343 TSCKVMRDSNGASRGSGFVAF 363
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 81/185 (43%), Gaps = 14/185 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L E + IFG G S V+R S+ +GF+ F S A +Q
Sbjct: 214 NVFVKNLSETTTEDDLREIFGKFGTITSVVVMREGDGR-SKCFGFVNFESPDEAALAVQD 272
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG + +E+ L + D + +++ +L V D L
Sbjct: 273 LNGKKFDDKEWYVGRAQKKSEREMELKEKFEKNLQETADKYQNTNLYLKNLDDTVDDEKL 332
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+E F A + ++ KV+ D + G S+G GFV F + R++ EMN + ++P+ +
Sbjct: 333 RELF-AEFGAITSCKVMRD-SNGASRGSGFVAFKSAEDASRALAEMNNKMVGSKPLYVAL 390
Query: 244 AATKK 248
A K+
Sbjct: 391 AQRKE 395
>gi|217074874|gb|ACJ85797.1| unknown [Medicago truncatula]
Length = 494
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 121/248 (48%), Gaps = 27/248 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL + +S + +F G+ VS ++ R+ + S GYG++ F + A + +
Sbjct: 25 SLYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQSLGYGYVNFSNPHDAAKAMDV 84
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ ++ R+ IF+ +L + L +TF +++ ++
Sbjct: 85 LNFT--PLNNKPIRIMYSHRDPSVRKSGAA---NIFIKNLDRAIDHKALYDTF-SIFGNI 138
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
K+ D +G SKGYGFV+F +E ++ ++NG+L + +P+ +G
Sbjct: 139 LSCKIAMD-ASGLSKGYGFVQFENEESAQSAIDKLNGMLLNDKPVYVG-----------H 186
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL----VHVKIPAGK 310
+Q+ Q+ + NN ++V L SVTDD LK FG+YG + V +
Sbjct: 187 FQRK--QDRDNALSNAKFNN--VYVKNLSESVTDDDLKNTFGEYGTITSAVVMRDVDGKS 242
Query: 311 RC-GFVQF 317
+C GFV F
Sbjct: 243 KCFGFVNF 250
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 120/267 (44%), Gaps = 30/267 (11%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S K+ + + S+GYGF++F +
Sbjct: 104 PSVRKSGAANIFIKNLDRAIDHKALYDTFSIFGNILSCKIAMDA-SGLSKGYGFVQFENE 162
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT------IFVGDLAADVT 179
+A+ + NG + G +R+QD + ++V +L+ VT
Sbjct: 163 ESAQSAIDKLNGMLLNDKP-------VYVGHFQRKQDRDNALSNAKFNNVYVKNLSESVT 215
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
D L+ TF Y ++ A V+ D G+SK +GFV F + ++ +NG +
Sbjct: 216 DDDLKNTF-GEYGTITSAVVMRD-VDGKSKCFGFVNFENADAAAEAVEALNGKKFDDKEW 273
Query: 240 RIGPAATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFG 296
+G A K + ++++++ + G N +++ LD SVTD+ L +F
Sbjct: 274 YVGKALKKYERELELKERHEQSMKETVDKFYGAN------LYLKNLDDSVTDEKLSELFS 327
Query: 297 QYGELVHVKI---PAG--KRCGFVQFA 318
++G + KI P G + GFV F+
Sbjct: 328 EFGTVTSCKILRDPQGISRGSGFVAFS 354
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 87/191 (45%), Gaps = 14/191 (7%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S+ ++++ +L + + + + FG G S V+R+ S+ +GF+ F + AA
Sbjct: 198 SNAKFNNVYVKNLSESVTDDDLKNTFGEYGTITSAVVMRDVDGK-SKCFGFVNFENADAA 256
Query: 129 ERVLQTFNGTQ-----------MPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAAD 177
++ NG + + E+ L + + D +++ +L
Sbjct: 257 AEAVEALNGKKFDDKEWYVGKALKKYERELELKERHEQSMKETVDKFYGANLYLKNLDDS 316
Query: 178 VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTR 237
VTD L E F + + +V K++ D G S+G GFV F E R++ EMNG + + +
Sbjct: 317 VTDEKLSELF-SEFGTVTSCKILRD-PQGISRGSGFVAFSTPEEATRALAEMNGKMVAGK 374
Query: 238 PMRIGPAATKK 248
P+ + PA K+
Sbjct: 375 PLYVAPAQKKE 385
>gi|410898224|ref|XP_003962598.1| PREDICTED: polyadenylate-binding protein 4-like [Takifugu rubripes]
Length = 653
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 114/243 (46%), Gaps = 24/243 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + E+ + F G +S +V R+ T S GY ++ F A AER L T
Sbjct: 12 SLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALDT 71
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + + R+ W+ R+ G +F+ +L + + L +TF A + ++
Sbjct: 72 MNFDVVKG--KPIRIMWSQRDPSLRKSGVG---NVFIKNLDKSIDNKALYDTFSA-FGNI 125
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KVV D SKGY FV F + R++ +MNG+L + R + +G ++K +
Sbjct: 126 LSCKVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKR 311
KA T +++ + D+ LK +F +YG+ + VK+ P GK
Sbjct: 184 GAKAK-------------EFTNVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMDPTGKS 230
Query: 312 CGF 314
GF
Sbjct: 231 RGF 233
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +F G+ +S KV+ + T S G+GF+ + H
Sbjct: 185 AKAKEFTNVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMDP-TGKSRGFGFVSYEKHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A + ++ NGT++ E+ L + R +++ +L
Sbjct: 244 ANKAVEDMNGTELNGKTVFVGRAQKKNERQAELKRKFEMLKQERISRYQGVNLYIKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + S+ AKV+ + GRSKG+GFV F E +++TEMNG + +
Sbjct: 304 TIDDEKLRKEF-SPFGSITSAKVMLEE--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 237 RPMRIGPAATK---KAATGQQY 255
+P+ + A K KA QY
Sbjct: 361 KPLYVALAQRKEERKAHLTNQY 382
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 32/161 (19%)
Query: 165 PDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLR 224
P +++VGDL D+T+ +L E F V +V D T RS GY +V F ++ R
Sbjct: 9 PMASLYVGDLHPDITEAMLYEKFSPA-GPVLSIRVCRDMITRRSLGYAYVNFSQPADAER 67
Query: 225 SMTEMNGVLCSTRPMRI----GPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
++ MN + +P+RI + +K+ G +F+
Sbjct: 68 ALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVG-----------------------NVFIK 104
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIPA----GKRCGFVQF 317
LD S+ + L F +G ++ K+ K FV F
Sbjct: 105 NLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHF 145
>gi|398327|emb|CAA81127.1| poly(A)-mRNA binding protein [Anemia phyllitidis]
Length = 638
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 132/273 (48%), Gaps = 37/273 (13%)
Query: 52 VPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQT 111
+ P + PY VAP SL++GDL P + ES + +F G+ VS +V R+ T
Sbjct: 13 IATPISGSSPY-VAP--------SLYVGDLDPDVSESELYEVFNQIGQVVSIRVCRDLMT 63
Query: 112 NFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFV 171
S GY ++ + +H A + L+ N T + + R+ ++ R+ IF+
Sbjct: 64 KKSLGYAYVNYGTHQDASQALELLNFTLVKG--KPIRIMYSHRDPSIRKSGAA---NIFI 118
Query: 172 GDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
+L + + L +TF A + ++ +VV D G SKGYGFV+F E ++ ++NG
Sbjct: 119 KNLEKSIDNKALHDTFSA-FGTILSCRVVMD-DAGNSKGYGFVQFEKEESAQIAIEKVNG 176
Query: 232 VLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDIL 291
+L + R + + P K Q+ A+ +N NN ++V L + TD+ L
Sbjct: 177 MLINDRQVSVAPFIRK-----QERDMASSKNF---------NN--VYVKNLAEATTDEDL 220
Query: 292 KTVFGQYGEL---VHVKIPAGK-RC-GFVQFAN 319
+ VF +G + V ++ GK +C GFV F N
Sbjct: 221 RKVFAGFGPISSAVVMRDADGKSKCFGFVNFEN 253
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 86/192 (44%), Gaps = 14/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
ASS ++++ +L + + +F G S V+R+ S+ +GF+ F +
Sbjct: 198 ASSKNFNNVYVKNLAEATTDEDLRKVFAGFGPISSAVVMRDADGK-SKCFGFVNFENVDD 256
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A ++ NG + +E+ L + +++ +++ ++
Sbjct: 257 AANAVENLNGKLINEKEWYVGRAQKKSEREAELKAKFEQVRKEKEEKFQGVNLYLKNIDD 316
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L+E F AV+ +V KV+ G+S G GFV F E ++++ +MNG + +
Sbjct: 317 SIDDEKLRELF-AVFGTVTSCKVMKS-PQGQSMGSGFVTFSAPEEAMQAVNDMNGKMVGS 374
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 375 KPLYVALAQRKE 386
>gi|226287551|gb|EEH43064.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb18]
Length = 761
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 120/265 (45%), Gaps = 26/265 (9%)
Query: 61 PYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFI 120
P AP + SL++G+L P + E+ + +F G+ S +V R+ T S GY ++
Sbjct: 41 PNSAAPTNAQPHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYV 100
Query: 121 EFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTD 180
+ + A ER L+ N T + + R+ W+ R+ G +F+ +L + +
Sbjct: 101 NYNNTADGERALEDLNYTLIKG--KPCRIMWSQRDPALRKTGQG---NVFIKNLDTAIDN 155
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L +TF A + ++ KV D G SKGYGFV + ++ +NG+L + + +
Sbjct: 156 KALHDTF-AAFGNILSCKVAQDE-FGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVF 213
Query: 241 IGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGE 300
+G KK + Q E N T ++V L+P VT++ + +F +YGE
Sbjct: 214 VGHHIAKK-------------DRQSKFEEMKANFTNVYVKNLEPEVTNEEFRELFEKYGE 260
Query: 301 LVHVKIP------AGKRCGFVQFAN 319
+ + + GFV F N
Sbjct: 261 ITSASLSRDNETGKSRGFGFVNFVN 285
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 110/236 (46%), Gaps = 12/236 (5%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+++I +L ++ + F G +S KV +++ N S+GYGF+ + + AA ++
Sbjct: 143 NVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAATNAIKH 201
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQETFRAVYSS 193
NG + + + A + ++ +FT ++V +L +VT+ +E F Y
Sbjct: 202 VNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNLEPEVTNEEFRELFEK-YGE 260
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK---KAA 250
+ A + D TG+S+G+GFV F + ++ ++N + + +G A K +
Sbjct: 261 ITSASLSRDNETGKSRGFGFVNFVNHDSAAAAVEDLNDKEYKGQKLYVGRAQKKHEREEE 320
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
+Q++ A + QG N ++V L + D+ L+ +F +G + ++
Sbjct: 321 LRKQHEAARVEKASKYQGVN------LYVKNLTDDIDDEKLRDLFIGFGNITSARV 370
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 93/253 (36%), Gaps = 65/253 (25%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L+P + +F GE S + R+ +T S G+GF+ FV+H +A ++
Sbjct: 236 NVYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNETGKSRGFGFVNFVNHDSAAAAVED 295
Query: 135 FN-----------GTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
N G E+ L A + ++V +L D+ D L
Sbjct: 296 LNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQGVNLYVKNLTDDIDDEKL 355
Query: 184 QETFRAVYSSVKGAKVV------------------------------------------- 200
++ F + ++ A+V+
Sbjct: 356 RDLFIG-FGNITSARVMRDTISDAGSESEKEKEASKDNKENVKEETKKEAGGEDSAEKTD 414
Query: 201 ----------TDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
TD+ G+SKG+GFV F + E +++TEMN + + +P+ + A K
Sbjct: 415 KAEKPDTKKPTDKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMVNGKPLYVALAQRKDVR 474
Query: 251 TGQQYQKATYQNT 263
Q +NT
Sbjct: 475 KSQLEASIQARNT 487
>gi|332208761|ref|XP_003253477.1| PREDICTED: polyadenylate-binding protein 1-like [Nomascus
leucogenys]
Length = 590
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 119/258 (46%), Gaps = 28/258 (10%)
Query: 67 DASSDG--IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVS 124
+AS G + SL++GDL P + E+ + F G +S +V R+ T S GY +I F
Sbjct: 2 NASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQ 61
Query: 125 HAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQ 184
A AER L T N + Q R+ W+ G R+ G IF+ +L + + L
Sbjct: 62 PADAERALDTMNFEMLKG--QPIRIMWSQRDPGLRKSGVG---NIFIKNLEDSIDNKALY 116
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
+TF + + ++ KV D S+G+GFV F +++ MNG+L + R + +G
Sbjct: 117 DTF-STFGNILSCKVACDEHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHF 173
Query: 245 ATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHV 304
+++ + G T I+V L V + L+ +F Q+G+++ V
Sbjct: 174 KSRR-------------EREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSV 220
Query: 305 KI----PAGKRC-GFVQF 317
K+ RC GFV F
Sbjct: 221 KVMRDNSGHSRCFGFVNF 238
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 15/185 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G+ +++I +L+ ++ + F G +S KV ++ S G+GF+ F +H
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHG--SRGFGFVHFETH 148
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD-----DGPDFT-IFVGDLAADVT 179
AA++ + T NG + N R + + R ++ +FT I+V +L DV
Sbjct: 149 EAAQQAINTMNGMLL-----NDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVD 203
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
+ LQ+ F + + + KV+ D +G S+ +GFV F E +++ MNG S R +
Sbjct: 204 EQGLQDLF-SQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLL 261
Query: 240 RIGPA 244
G A
Sbjct: 262 YAGRA 266
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.131 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,524,394,260
Number of Sequences: 23463169
Number of extensions: 248674595
Number of successful extensions: 2819788
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 17602
Number of HSP's successfully gapped in prelim test: 14128
Number of HSP's that attempted gapping in prelim test: 2134967
Number of HSP's gapped (non-prelim): 463908
length of query: 320
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 178
effective length of database: 9,027,425,369
effective search space: 1606881715682
effective search space used: 1606881715682
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 77 (34.3 bits)