Query 020848
Match_columns 320
No_of_seqs 245 out of 2958
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 09:04:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020848.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020848hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1r30_A Biotin synthase; SAM ra 100.0 5.2E-44 1.8E-48 328.5 36.0 286 12-299 54-340 (369)
2 3t7v_A Methylornithine synthas 100.0 4.2E-44 1.5E-48 327.0 26.6 283 10-305 49-349 (350)
3 3iix_A Biotin synthetase, puta 100.0 2.3E-39 8E-44 295.5 30.8 283 8-300 39-340 (348)
4 2qgq_A Protein TM_1862; alpha- 99.9 2.6E-24 8.9E-29 192.1 19.1 197 25-228 7-216 (304)
5 1tv8_A MOAA, molybdenum cofact 99.9 2E-22 7E-27 182.8 22.4 204 16-230 9-221 (340)
6 1olt_A Oxygen-independent copr 99.9 2E-22 6.7E-27 189.6 14.8 202 28-236 57-277 (457)
7 2yx0_A Radical SAM enzyme; pre 99.8 7.9E-20 2.7E-24 165.9 19.6 203 29-239 76-309 (342)
8 3c8f_A Pyruvate formate-lyase 99.8 7.6E-20 2.6E-24 157.8 17.9 194 29-233 25-237 (245)
9 2z2u_A UPF0026 protein MJ0257; 99.8 4.3E-19 1.5E-23 158.9 11.4 198 23-234 52-282 (311)
10 3rfa_A Ribosomal RNA large sub 99.7 2E-16 7E-21 144.6 18.5 198 29-244 121-346 (404)
11 2a5h_A L-lysine 2,3-aminomutas 99.6 5.6E-15 1.9E-19 136.9 15.4 185 25-234 118-317 (416)
12 3can_A Pyruvate-formate lyase- 99.5 9.3E-13 3.2E-17 108.3 14.8 146 86-235 11-174 (182)
13 2cw6_A Hydroxymethylglutaryl-C 98.6 3.8E-06 1.3E-10 74.1 20.0 223 56-294 24-265 (298)
14 1ydn_A Hydroxymethylglutaryl-C 98.6 9E-06 3.1E-10 71.6 20.1 222 56-294 23-264 (295)
15 4fhd_A Spore photoproduct lyas 98.5 5.2E-08 1.8E-12 87.6 4.9 163 23-193 108-282 (368)
16 2ftp_A Hydroxymethylglutaryl-C 98.4 0.00011 3.8E-09 64.7 21.5 225 54-294 25-268 (302)
17 1ydo_A HMG-COA lyase; TIM-barr 98.3 9.7E-05 3.3E-09 65.2 20.5 225 54-294 23-266 (307)
18 3ble_A Citramalate synthase fr 98.2 0.00017 5.8E-09 64.5 19.6 221 55-294 37-273 (337)
19 3ewb_X 2-isopropylmalate synth 97.8 0.0012 4E-08 57.9 17.4 224 54-294 22-260 (293)
20 3ivs_A Homocitrate synthase, m 97.8 0.0022 7.4E-08 58.8 19.6 190 54-266 56-252 (423)
21 1nvm_A HOA, 4-hydroxy-2-oxoval 97.7 0.0027 9.1E-08 56.9 18.6 214 55-294 26-253 (345)
22 3eeg_A 2-isopropylmalate synth 97.6 0.0033 1.1E-07 55.8 17.3 221 54-294 23-261 (325)
23 3rmj_A 2-isopropylmalate synth 97.6 0.0085 2.9E-07 54.1 19.8 220 55-294 30-267 (370)
24 2nx9_A Oxaloacetate decarboxyl 97.4 0.024 8.2E-07 52.6 20.0 215 55-294 26-260 (464)
25 2ztj_A Homocitrate synthase; ( 97.4 0.017 5.9E-07 52.3 18.8 208 55-287 21-241 (382)
26 1rqb_A Transcarboxylase 5S sub 97.3 0.0064 2.2E-07 57.4 14.9 215 55-294 43-279 (539)
27 3qja_A IGPS, indole-3-glycerol 97.2 0.096 3.3E-06 45.0 20.2 195 60-298 73-269 (272)
28 1h5y_A HISF; histidine biosynt 97.1 0.029 1E-06 47.3 16.9 205 59-295 33-252 (253)
29 3inp_A D-ribulose-phosphate 3- 97.1 0.021 7.2E-07 48.4 15.1 197 56-289 37-241 (246)
30 3bg3_A Pyruvate carboxylase, m 97.0 0.048 1.6E-06 53.3 19.1 215 56-294 122-364 (718)
31 1thf_D HISF protein; thermophI 96.5 0.29 9.9E-06 41.3 17.7 205 61-295 32-249 (253)
32 3ovp_A Ribulose-phosphate 3-ep 96.4 0.066 2.3E-06 44.8 13.2 192 57-289 15-215 (228)
33 3ctl_A D-allulose-6-phosphate 96.4 0.14 4.9E-06 42.8 15.2 196 57-289 11-215 (231)
34 1x7f_A Outer surface protein; 96.3 0.056 1.9E-06 48.6 12.3 77 57-135 39-123 (385)
35 1ka9_F Imidazole glycerol phos 95.8 0.55 1.9E-05 39.5 16.0 206 60-295 32-250 (252)
36 3tr9_A Dihydropteroate synthas 95.7 0.54 1.8E-05 41.1 15.7 76 56-133 46-130 (314)
37 1eye_A DHPS 1, dihydropteroate 95.6 0.32 1.1E-05 41.9 13.8 77 55-133 25-105 (280)
38 3dxi_A Putative aldolase; TIM 95.5 0.31 1.1E-05 42.8 13.6 209 55-289 20-240 (320)
39 3tsm_A IGPS, indole-3-glycerol 95.3 1.2 4E-05 38.2 16.4 172 62-275 82-255 (272)
40 1aj0_A DHPS, dihydropteroate s 95.3 0.68 2.3E-05 39.9 14.9 138 55-194 34-207 (282)
41 4hb7_A Dihydropteroate synthas 95.2 0.43 1.5E-05 40.6 13.0 135 55-191 26-189 (270)
42 2qf7_A Pyruvate carboxylase pr 95.1 1.3 4.3E-05 46.0 18.7 214 56-294 570-811 (1165)
43 2p0o_A Hypothetical protein DU 94.9 0.97 3.3E-05 40.4 14.9 77 57-135 15-99 (372)
44 3f4w_A Putative hexulose 6 pho 94.8 0.76 2.6E-05 37.4 13.6 191 56-288 10-204 (211)
45 2bdq_A Copper homeostasis prot 94.8 0.31 1.1E-05 40.2 10.8 138 58-216 75-219 (224)
46 3hq1_A 2-isopropylmalate synth 94.8 1.8 6.2E-05 41.5 17.5 225 54-295 88-339 (644)
47 1tx2_A DHPS, dihydropteroate s 94.8 0.49 1.7E-05 41.0 12.5 137 56-194 60-226 (297)
48 3e49_A Uncharacterized protein 94.6 2.1 7.3E-05 37.3 20.6 230 56-301 29-298 (311)
49 2dqw_A Dihydropteroate synthas 94.4 0.45 1.5E-05 41.2 11.4 77 55-133 48-128 (294)
50 1tqj_A Ribulose-phosphate 3-ep 94.3 0.63 2.2E-05 38.8 12.0 195 58-289 16-219 (230)
51 2y5s_A DHPS, dihydropteroate s 94.3 1 3.5E-05 39.0 13.5 76 56-133 43-122 (294)
52 2yci_X 5-methyltetrahydrofolat 94.2 1 3.5E-05 38.5 13.2 74 56-135 31-108 (271)
53 2w6r_A Imidazole glycerol phos 94.1 1.3 4.3E-05 37.6 13.7 204 61-294 32-253 (266)
54 3cu2_A Ribulose-5-phosphate 3- 94.0 0.22 7.4E-06 41.9 8.3 190 58-289 25-234 (237)
55 1vzw_A Phosphoribosyl isomeras 93.9 2.4 8.3E-05 35.2 15.5 196 60-287 33-239 (244)
56 3k13_A 5-methyltetrahydrofolat 93.8 3.1 0.00011 36.1 20.1 197 56-269 34-254 (300)
57 2ekc_A AQ_1548, tryptophan syn 93.7 2.9 9.8E-05 35.5 20.5 187 57-273 29-238 (262)
58 4e38_A Keto-hydroxyglutarate-a 93.6 2.6 8.9E-05 35.1 14.1 159 56-270 43-203 (232)
59 2y88_A Phosphoribosyl isomeras 93.5 1.2 4.1E-05 37.1 12.3 74 60-138 32-106 (244)
60 3vnd_A TSA, tryptophan synthas 93.4 3.2 0.00011 35.3 16.1 186 57-272 30-238 (267)
61 3ajx_A 3-hexulose-6-phosphate 93.4 2.5 8.7E-05 34.1 17.2 189 56-289 10-204 (207)
62 1qwg_A PSL synthase;, (2R)-pho 92.5 3.7 0.00013 34.4 13.4 129 56-203 23-167 (251)
63 3e02_A Uncharacterized protein 92.4 5.1 0.00017 34.9 23.7 232 56-302 29-299 (311)
64 2vp8_A Dihydropteroate synthas 92.3 0.54 1.8E-05 41.2 8.5 77 55-133 61-142 (318)
65 3hbl_A Pyruvate carboxylase; T 92.3 12 0.00041 38.8 19.7 215 56-294 552-794 (1150)
66 2fli_A Ribulose-phosphate 3-ep 92.2 0.87 3E-05 37.3 9.5 199 57-289 14-216 (220)
67 1vli_A Spore coat polysacchari 91.9 6.7 0.00023 35.2 20.8 179 57-266 42-245 (385)
68 2vef_A Dihydropteroate synthas 91.8 2.6 8.8E-05 36.8 12.3 77 55-133 29-110 (314)
69 3lot_A Uncharacterized protein 91.3 7 0.00024 34.0 23.8 231 56-301 29-301 (314)
70 3no5_A Uncharacterized protein 91.1 6.6 0.00023 33.5 21.0 225 56-298 27-266 (275)
71 1twd_A Copper homeostasis prot 90.9 2.1 7.1E-05 36.1 10.3 113 58-188 72-188 (256)
72 1qop_A Tryptophan synthase alp 90.9 6.7 0.00023 33.2 16.7 186 57-272 29-237 (268)
73 3tdn_A FLR symmetric alpha-bet 90.8 1.5 5.3E-05 36.6 9.7 74 61-138 37-111 (247)
74 1jvn_A Glutamine, bifunctional 90.5 10 0.00035 35.9 16.1 221 59-295 280-551 (555)
75 3oa3_A Aldolase; structural ge 90.5 7.7 0.00026 33.2 19.9 181 56-266 71-260 (288)
76 1z41_A YQJM, probable NADH-dep 90.4 1.1 3.9E-05 39.5 8.8 80 56-135 226-307 (338)
77 1m5w_A Pyridoxal phosphate bio 90.3 1.4 4.6E-05 36.7 8.4 122 58-187 76-203 (243)
78 1thf_D HISF protein; thermophI 90.0 5.1 0.00017 33.4 12.4 95 63-171 155-250 (253)
79 3c6c_A 3-keto-5-aminohexanoate 89.8 9.4 0.00032 33.2 18.1 223 56-298 45-304 (316)
80 1f76_A Dihydroorotate dehydrog 89.8 2.3 8E-05 37.4 10.4 79 56-135 222-318 (336)
81 3mcm_A 2-amino-4-hydroxy-6-hyd 89.7 2 6.9E-05 39.3 9.9 74 56-131 209-294 (442)
82 1tqx_A D-ribulose-5-phosphate 89.6 4.9 0.00017 33.2 11.6 199 57-289 16-219 (227)
83 4djd_D C/Fe-SP, corrinoid/iron 89.6 4.2 0.00014 35.6 11.5 135 59-193 80-236 (323)
84 3gk0_A PNP synthase, pyridoxin 89.4 1.6 5.4E-05 36.9 8.3 120 58-185 104-229 (278)
85 3gr7_A NADPH dehydrogenase; fl 89.3 1.1 3.6E-05 39.8 7.7 76 56-135 226-307 (340)
86 2h9a_B CO dehydrogenase/acetyl 89.0 6.2 0.00021 34.3 12.2 72 59-130 74-149 (310)
87 2p10_A MLL9387 protein; putati 89.0 2.7 9.3E-05 35.9 9.6 187 93-294 79-285 (286)
88 2wqp_A Polysialic acid capsule 88.7 12 0.00042 33.0 20.9 178 57-266 33-233 (349)
89 2bmb_A Folic acid synthesis pr 88.5 7.3 0.00025 36.6 13.0 139 57-195 247-459 (545)
90 3lab_A Putative KDPG (2-keto-3 88.5 9.1 0.00031 31.4 13.1 165 54-270 20-188 (217)
91 1h1y_A D-ribulose-5-phosphate 88.5 7.5 0.00026 31.9 12.0 193 58-289 18-219 (228)
92 1ka9_F Imidazole glycerol phos 88.3 7.6 0.00026 32.2 12.2 92 64-170 157-250 (252)
93 3hgj_A Chromate reductase; TIM 87.7 2.4 8.1E-05 37.7 8.9 80 56-135 236-318 (349)
94 1ydn_A Hydroxymethylglutaryl-C 87.3 2.4 8.2E-05 36.6 8.6 23 57-79 153-175 (295)
95 2ftp_A Hydroxymethylglutaryl-C 87.1 7.9 0.00027 33.4 11.8 79 56-139 156-239 (302)
96 3zwt_A Dihydroorotate dehydrog 87.0 3.4 0.00012 36.9 9.5 80 56-135 231-327 (367)
97 1h5y_A HISF; histidine biosynt 86.7 10 0.00036 31.1 12.2 93 64-170 159-252 (253)
98 3ewb_X 2-isopropylmalate synth 86.6 5.8 0.0002 34.2 10.5 33 92-124 149-184 (293)
99 4gj1_A 1-(5-phosphoribosyl)-5- 86.6 2.9 9.8E-05 35.0 8.4 196 63-287 35-241 (243)
100 3apt_A Methylenetetrahydrofola 86.5 5 0.00017 34.9 10.1 101 56-168 83-201 (310)
101 1w0m_A TIM, triosephosphate is 86.4 13 0.00044 30.7 14.2 129 121-275 78-208 (226)
102 1hg3_A Triosephosphate isomera 86.2 13 0.00044 30.6 19.5 128 121-274 81-210 (225)
103 2v82_A 2-dehydro-3-deoxy-6-pho 86.0 12 0.00041 30.1 17.4 163 56-274 16-181 (212)
104 4af0_A Inosine-5'-monophosphat 85.9 3 0.0001 39.0 8.7 119 59-188 280-403 (556)
105 1vc4_A Indole-3-glycerol phosp 85.9 15 0.0005 30.9 16.2 175 59-274 65-241 (254)
106 3g8r_A Probable spore coat pol 85.7 18 0.00062 31.9 20.9 203 57-289 19-251 (350)
107 3ngj_A Deoxyribose-phosphate a 85.7 14 0.00049 30.7 17.3 175 56-266 40-226 (239)
108 1tv5_A Dhodehase, dihydroorota 85.2 5.3 0.00018 36.6 10.0 80 56-135 308-402 (443)
109 1rpx_A Protein (ribulose-phosp 84.9 15 0.0005 30.1 13.7 194 57-289 21-225 (230)
110 1vcv_A Probable deoxyribose-ph 84.7 15 0.00053 30.2 14.4 184 56-264 14-211 (226)
111 3nav_A Tryptophan synthase alp 84.6 18 0.0006 30.8 17.6 186 57-272 32-240 (271)
112 3ngj_A Deoxyribose-phosphate a 84.5 6 0.00021 33.0 9.2 76 56-135 154-229 (239)
113 3o6c_A PNP synthase, pyridoxin 84.2 5.7 0.0002 33.3 8.8 120 58-185 75-221 (260)
114 1vp8_A Hypothetical protein AF 84.2 7 0.00024 31.3 8.9 93 57-160 27-133 (201)
115 3gnh_A L-lysine, L-arginine ca 84.0 19 0.00065 31.7 13.2 79 56-136 164-248 (403)
116 3ble_A Citramalate synthase fr 83.7 9.3 0.00032 33.6 10.7 36 91-126 167-205 (337)
117 3ndo_A Deoxyribose-phosphate a 83.3 9.8 0.00034 31.5 9.9 76 57-135 144-219 (231)
118 4dwd_A Mandelate racemase/muco 83.3 6.7 0.00023 35.3 9.8 42 150-195 276-317 (393)
119 2ovl_A Putative racemase; stru 83.0 8 0.00027 34.4 10.2 25 150-174 277-301 (371)
120 3nvt_A 3-deoxy-D-arabino-heptu 83.0 26 0.00088 31.4 19.1 205 57-289 154-373 (385)
121 3fst_A 5,10-methylenetetrahydr 82.8 5.8 0.0002 34.4 8.8 30 56-85 94-123 (304)
122 1mzh_A Deoxyribose-phosphate a 82.7 9 0.00031 31.5 9.6 76 56-135 129-204 (225)
123 2w6r_A Imidazole glycerol phos 82.7 7.8 0.00027 32.5 9.5 68 64-135 161-229 (266)
124 4h3d_A 3-dehydroquinate dehydr 82.2 21 0.00073 29.9 14.2 163 56-244 29-208 (258)
125 3i65_A Dihydroorotate dehydrog 82.2 9.4 0.00032 34.6 10.2 80 56-135 280-374 (415)
126 3l5l_A Xenobiotic reductase A; 82.1 4 0.00014 36.4 7.7 76 56-135 243-325 (363)
127 3b0p_A TRNA-dihydrouridine syn 82.1 6.2 0.00021 34.9 9.0 78 57-135 142-225 (350)
128 3i4k_A Muconate lactonizing en 82.0 10 0.00036 33.9 10.5 43 150-195 280-322 (383)
129 2qgy_A Enolase from the enviro 82.0 8.8 0.0003 34.4 10.1 25 150-174 280-304 (391)
130 1vhn_A Putative flavin oxidore 81.9 4 0.00014 35.6 7.6 68 63-135 144-213 (318)
131 3r12_A Deoxyribose-phosphate a 81.5 11 0.00037 31.8 9.7 76 56-135 170-245 (260)
132 3iwp_A Copper homeostasis prot 81.3 7.7 0.00026 33.2 8.8 115 58-190 110-229 (287)
133 3r12_A Deoxyribose-phosphate a 81.2 23 0.0008 29.8 20.5 178 56-266 56-242 (260)
134 3eeg_A 2-isopropylmalate synth 81.2 6.7 0.00023 34.4 8.7 22 57-78 149-170 (325)
135 3oa3_A Aldolase; structural ge 80.8 14 0.00048 31.6 10.2 76 56-135 185-263 (288)
136 3ndo_A Deoxyribose-phosphate a 80.8 23 0.00077 29.3 18.3 175 56-266 26-216 (231)
137 1u83_A Phosphosulfolactate syn 80.7 14 0.00047 31.3 10.0 120 56-195 50-185 (276)
138 3lmz_A Putative sugar isomeras 80.6 14 0.00049 30.5 10.4 87 94-195 31-126 (257)
139 1mxs_A KDPG aldolase; 2-keto-3 80.2 23 0.00079 29.0 16.1 156 56-270 35-195 (225)
140 2r8c_A Putative amidohydrolase 80.1 12 0.00041 33.5 10.5 78 56-135 172-255 (426)
141 2rdx_A Mandelate racemase/muco 79.8 23 0.00079 31.5 12.0 44 149-195 271-314 (379)
142 2y88_A Phosphoribosyl isomeras 79.8 5.1 0.00018 33.1 7.3 71 61-135 151-225 (244)
143 3khj_A Inosine-5-monophosphate 79.5 26 0.00088 31.1 12.0 111 67-190 112-228 (361)
144 1ub3_A Aldolase protein; schif 79.5 15 0.00051 30.1 9.8 75 56-134 130-204 (220)
145 1jub_A Dihydroorotate dehydrog 79.4 8.4 0.00029 33.2 8.8 79 56-135 169-271 (311)
146 3ffs_A Inosine-5-monophosphate 79.3 19 0.00063 32.5 11.1 68 62-137 146-214 (400)
147 2eja_A URO-D, UPD, uroporphyri 79.3 31 0.0011 30.0 14.5 68 65-135 185-259 (338)
148 3bjs_A Mandelate racemase/muco 79.0 21 0.0007 32.5 11.6 42 150-195 316-357 (428)
149 2e6f_A Dihydroorotate dehydrog 78.5 8.4 0.00029 33.3 8.5 79 56-135 171-273 (314)
150 3kru_A NADH:flavin oxidoreduct 78.5 7.3 0.00025 34.4 8.1 80 56-136 227-308 (343)
151 1sfl_A 3-dehydroquinate dehydr 78.4 27 0.00093 28.9 12.6 152 56-235 14-181 (238)
152 1tqx_A D-ribulose-5-phosphate 78.4 9.9 0.00034 31.4 8.4 61 73-135 139-201 (227)
153 3chv_A Prokaryotic domain of u 78.1 32 0.0011 29.4 20.6 225 56-302 31-274 (284)
154 3lye_A Oxaloacetate acetyl hyd 77.9 14 0.00048 32.0 9.5 66 56-127 140-212 (307)
155 1y0e_A Putative N-acetylmannos 77.9 12 0.0004 30.4 8.8 68 68-135 135-204 (223)
156 1jvn_A Glutamine, bifunctional 77.8 23 0.00078 33.4 11.8 94 62-170 455-551 (555)
157 3ozy_A Putative mandelate race 77.7 15 0.00052 32.9 10.2 42 150-195 282-323 (389)
158 3vzx_A Heptaprenylglyceryl pho 77.7 22 0.00075 29.3 10.2 70 56-135 137-208 (228)
159 4avf_A Inosine-5'-monophosphat 77.7 23 0.00078 32.9 11.6 118 60-189 229-352 (490)
160 1vzw_A Phosphoribosyl isomeras 77.6 6 0.00021 32.8 7.0 68 64-135 151-222 (244)
161 1mdl_A Mandelate racemase; iso 77.5 11 0.00039 33.2 9.2 24 150-173 275-298 (359)
162 1eep_A Inosine 5'-monophosphat 77.4 39 0.0013 30.3 12.9 70 61-138 154-225 (404)
163 1tzz_A Hypothetical protein L1 77.3 13 0.00043 33.4 9.5 24 150-173 300-326 (392)
164 3ddm_A Putative mandelate race 77.3 14 0.00048 33.2 9.8 42 150-195 286-327 (392)
165 3p6l_A Sugar phosphate isomera 76.9 9.8 0.00034 31.6 8.3 39 151-195 89-128 (262)
166 1nvm_A HOA, 4-hydroxy-2-oxoval 76.7 16 0.00055 32.1 9.8 32 93-124 149-183 (345)
167 2pgw_A Muconate cycloisomerase 76.5 22 0.00076 31.6 10.9 42 150-194 276-317 (384)
168 3fa4_A 2,3-dimethylmalate lyas 76.2 11 0.00039 32.5 8.4 67 55-127 131-204 (302)
169 2yw3_A 4-hydroxy-2-oxoglutarat 76.0 29 0.001 27.9 18.2 163 56-274 22-184 (207)
170 3mqt_A Mandelate racemase/muco 75.9 11 0.00039 33.8 8.8 127 57-195 182-328 (394)
171 3o0f_A Putative metal-dependen 75.9 12 0.0004 32.4 8.5 17 179-195 237-253 (301)
172 3toy_A Mandelate racemase/muco 75.8 9.5 0.00033 34.2 8.2 24 151-174 300-323 (383)
173 3b0p_A TRNA-dihydrouridine syn 75.4 42 0.0014 29.5 13.3 86 118-205 73-165 (350)
174 1r3s_A URO-D, uroporphyrinogen 75.3 43 0.0015 29.5 13.0 68 65-135 203-283 (367)
175 1ep3_A Dihydroorotate dehydrog 75.3 9.6 0.00033 32.8 7.9 74 61-135 178-270 (311)
176 4e5t_A Mandelate racemase / mu 75.3 15 0.00053 33.0 9.5 98 91-194 220-334 (404)
177 4fxs_A Inosine-5'-monophosphat 75.2 13 0.00044 34.6 9.2 70 65-135 286-363 (496)
178 3a24_A Alpha-galactosidase; gl 75.1 14 0.00047 35.6 9.4 108 56-172 306-424 (641)
179 3l0g_A Nicotinate-nucleotide p 74.7 7 0.00024 33.7 6.6 64 57-135 216-279 (300)
180 2p10_A MLL9387 protein; putati 74.7 27 0.00092 29.8 10.1 124 56-191 108-250 (286)
181 1vcv_A Probable deoxyribose-ph 74.6 25 0.00085 28.9 9.8 73 56-130 125-211 (226)
182 3paj_A Nicotinate-nucleotide p 74.6 15 0.00052 31.9 8.8 58 67-135 246-303 (320)
183 2inf_A URO-D, UPD, uroporphyri 74.5 44 0.0015 29.3 13.2 69 64-135 198-272 (359)
184 1nu5_A Chloromuconate cycloiso 74.3 14 0.00049 32.6 9.0 41 151-194 275-315 (370)
185 4fxs_A Inosine-5'-monophosphat 74.0 38 0.0013 31.4 12.1 123 62-203 233-362 (496)
186 2poz_A Putative dehydratase; o 74.0 10 0.00034 34.0 7.9 99 91-195 211-326 (392)
187 2gou_A Oxidoreductase, FMN-bin 74.0 19 0.00065 31.9 9.7 74 56-135 247-322 (365)
188 1qpo_A Quinolinate acid phosph 73.8 8.4 0.00029 33.0 6.9 59 67-135 209-269 (284)
189 2cw6_A Hydroxymethylglutaryl-C 73.8 20 0.0007 30.7 9.6 34 91-124 154-190 (298)
190 3a5v_A Alpha-galactosidase; be 73.7 8.8 0.0003 34.6 7.4 81 56-136 23-130 (397)
191 1zco_A 2-dehydro-3-deoxyphosph 73.5 40 0.0014 28.3 12.5 204 57-289 35-254 (262)
192 1vrd_A Inosine-5'-monophosphat 73.4 37 0.0013 31.3 11.9 72 59-138 236-309 (494)
193 1rvk_A Isomerase/lactonizing e 73.4 14 0.00047 33.0 8.7 22 151-172 288-309 (382)
194 3qn3_A Enolase; structural gen 73.3 10 0.00035 34.4 7.8 114 56-191 261-379 (417)
195 4e4u_A Mandalate racemase/muco 73.2 15 0.00052 33.2 8.9 99 90-194 212-327 (412)
196 1qap_A Quinolinic acid phospho 73.2 11 0.00037 32.6 7.5 56 69-135 225-280 (296)
197 2nzl_A Hydroxyacid oxidase 1; 73.1 20 0.00069 32.2 9.7 70 65-135 266-336 (392)
198 3fa4_A 2,3-dimethylmalate lyas 73.0 45 0.0015 28.7 15.0 169 114-291 24-206 (302)
199 2og9_A Mandelate racemase/muco 73.0 11 0.00037 33.9 7.9 23 151-173 294-316 (393)
200 1x1o_A Nicotinate-nucleotide p 72.7 17 0.00057 31.2 8.6 64 57-135 205-268 (286)
201 2qde_A Mandelate racemase/muco 72.7 8 0.00027 34.8 6.9 42 150-194 275-316 (397)
202 3mkc_A Racemase; metabolic pro 72.6 12 0.00041 33.6 8.1 127 57-195 187-333 (394)
203 3civ_A Endo-beta-1,4-mannanase 72.5 31 0.001 30.3 10.5 57 119-175 57-119 (343)
204 4exq_A UPD, URO-D, uroporphyri 72.5 51 0.0017 29.1 12.6 67 67-135 205-280 (368)
205 3q45_A Mandelate racemase/muco 72.3 14 0.00048 32.8 8.4 43 150-195 270-312 (368)
206 1vyr_A Pentaerythritol tetrani 72.0 23 0.00079 31.4 9.7 73 57-135 249-323 (364)
207 4avf_A Inosine-5'-monophosphat 72.0 20 0.00068 33.3 9.6 70 65-135 284-361 (490)
208 2nli_A Lactate oxidase; flavoe 71.9 21 0.00073 31.7 9.5 70 65-135 243-313 (368)
209 3dip_A Enolase; structural gen 71.8 23 0.00078 32.0 9.8 99 90-195 224-340 (410)
210 3sgz_A Hydroxyacid oxidase 2; 71.8 27 0.00092 30.9 9.9 70 65-135 231-301 (352)
211 2o56_A Putative mandelate race 71.8 11 0.00038 33.9 7.7 99 91-195 227-342 (407)
212 4a29_A Engineered retro-aldol 71.7 44 0.0015 28.0 13.4 175 56-276 64-240 (258)
213 3l21_A DHDPS, dihydrodipicolin 71.7 37 0.0013 29.2 10.7 105 56-172 33-147 (304)
214 3feq_A Putative amidohydrolase 71.6 14 0.00049 32.8 8.4 78 56-135 169-252 (423)
215 2nx9_A Oxaloacetate decarboxyl 71.5 22 0.00076 32.7 9.6 23 57-79 156-178 (464)
216 3tqv_A Nicotinate-nucleotide p 71.4 12 0.0004 32.1 7.2 59 66-135 212-270 (287)
217 3q58_A N-acetylmannosamine-6-p 71.4 12 0.00039 31.0 7.1 39 97-135 172-210 (229)
218 3gka_A N-ethylmaleimide reduct 71.4 10 0.00035 33.7 7.2 28 107-135 288-316 (361)
219 1chr_A Chloromuconate cycloiso 71.3 12 0.00042 33.2 7.8 42 150-194 274-315 (370)
220 3qtp_A Enolase 1; glycolysis, 71.3 25 0.00087 32.0 9.8 113 55-191 278-396 (441)
221 1mzh_A Deoxyribose-phosphate a 71.3 41 0.0014 27.5 12.1 126 56-203 17-151 (225)
222 2pp0_A L-talarate/galactarate 71.3 12 0.00041 33.6 7.8 81 91-173 232-329 (398)
223 1qo2_A Molecule: N-((5-phospho 70.8 5.9 0.0002 32.8 5.3 72 61-136 32-103 (241)
224 1wv2_A Thiazole moeity, thiazo 70.7 45 0.0016 28.0 10.4 80 52-135 115-216 (265)
225 1n7k_A Deoxyribose-phosphate a 70.7 24 0.00083 29.2 8.8 76 56-135 145-221 (234)
226 3igs_A N-acetylmannosamine-6-p 70.6 9 0.00031 31.7 6.3 39 97-135 172-210 (232)
227 3qja_A IGPS, indole-3-glycerol 70.5 11 0.00036 32.2 6.8 30 106-135 213-242 (272)
228 3vk5_A MOEO5; TIM barrel, tran 70.3 30 0.001 29.5 9.4 68 59-135 186-256 (286)
229 3r2g_A Inosine 5'-monophosphat 70.3 15 0.00051 32.7 7.9 124 59-204 99-228 (361)
230 2nql_A AGR_PAT_674P, isomerase 70.2 10 0.00034 34.0 7.0 42 150-194 293-334 (388)
231 2zad_A Muconate cycloisomerase 70.1 15 0.0005 32.3 7.9 41 151-194 270-310 (345)
232 4ab4_A Xenobiotic reductase B; 70.0 11 0.00039 33.4 7.1 18 117-134 289-307 (362)
233 3rmj_A 2-isopropylmalate synth 70.0 32 0.0011 30.6 10.1 15 281-295 343-357 (370)
234 4fo4_A Inosine 5'-monophosphat 69.9 52 0.0018 29.2 11.4 65 65-137 113-179 (366)
235 2gl5_A Putative dehydratase pr 69.6 12 0.00041 33.8 7.4 99 91-195 230-345 (410)
236 3rr1_A GALD, putative D-galact 69.5 12 0.0004 33.8 7.3 42 150-195 264-305 (405)
237 3tsm_A IGPS, indole-3-glycerol 69.1 16 0.00055 31.0 7.6 44 91-135 206-249 (272)
238 2p3z_A L-rhamnonate dehydratas 69.0 17 0.0006 32.9 8.3 81 91-172 234-331 (415)
239 1ps9_A 2,4-dienoyl-COA reducta 68.9 14 0.00049 35.6 8.2 80 56-135 225-310 (671)
240 3sjn_A Mandelate racemase/muco 68.9 15 0.00052 32.7 7.8 127 57-195 175-321 (374)
241 3t6c_A RSPA, putative MAND fam 68.8 18 0.00063 33.0 8.5 43 150-194 326-368 (440)
242 1tkk_A Similar to chloromucona 68.7 30 0.001 30.5 9.8 43 150-195 273-315 (366)
243 2oz8_A MLL7089 protein; struct 68.7 40 0.0014 30.0 10.7 23 150-172 274-296 (389)
244 4h83_A Mandelate racemase/muco 68.6 20 0.00069 32.1 8.6 22 150-171 296-317 (388)
245 1qwg_A PSL synthase;, (2R)-pho 68.6 31 0.0011 28.8 9.0 105 54-168 50-163 (251)
246 3aty_A Tcoye, prostaglandin F2 68.5 21 0.00071 31.9 8.6 22 58-79 265-286 (379)
247 4gxw_A Adenosine deaminase; am 68.4 33 0.0011 30.6 9.9 79 56-139 162-246 (380)
248 3otr_A Enolase; structural gen 68.4 16 0.00055 33.4 7.8 115 55-191 280-399 (452)
249 3eoo_A Methylisocitrate lyase; 68.4 23 0.00079 30.5 8.5 67 56-127 135-205 (298)
250 3sr7_A Isopentenyl-diphosphate 68.1 64 0.0022 28.5 11.8 141 116-273 155-311 (365)
251 2y7e_A 3-keto-5-aminohexanoate 67.9 56 0.0019 27.8 22.6 223 56-298 31-272 (282)
252 3cyv_A URO-D, UPD, uroporphyri 67.9 58 0.002 28.4 11.4 68 65-135 193-270 (354)
253 1fob_A Beta-1,4-galactanase; B 67.7 16 0.00053 32.0 7.5 65 105-175 18-82 (334)
254 3tj4_A Mandelate racemase; eno 67.6 17 0.00058 32.3 7.9 23 151-173 284-306 (372)
255 3gnn_A Nicotinate-nucleotide p 67.4 12 0.00041 32.2 6.5 64 57-135 218-281 (298)
256 2ztj_A Homocitrate synthase; ( 67.4 17 0.00057 32.6 7.7 118 56-189 107-242 (382)
257 1rqb_A Transcarboxylase 5S sub 67.2 36 0.0012 32.0 10.2 23 57-79 173-195 (539)
258 4hpn_A Putative uncharacterize 67.2 21 0.00072 31.7 8.5 128 56-195 169-315 (378)
259 3usb_A Inosine-5'-monophosphat 67.2 24 0.00084 32.9 9.1 70 65-135 311-388 (511)
260 3tak_A DHDPS, dihydrodipicolin 66.9 44 0.0015 28.4 10.1 106 56-173 19-134 (291)
261 3stp_A Galactonate dehydratase 66.9 13 0.00045 33.6 7.0 23 151-173 317-339 (412)
262 3fcp_A L-Ala-D/L-Glu epimerase 66.8 14 0.00049 32.9 7.3 41 151-194 280-320 (381)
263 3ugv_A Enolase; enzyme functio 66.8 11 0.00038 33.8 6.5 110 57-174 201-329 (390)
264 3tcs_A Racemase, putative; PSI 66.8 20 0.00069 32.1 8.2 24 151-174 286-309 (388)
265 4a35_A Mitochondrial enolase s 66.7 72 0.0024 29.0 12.0 22 151-172 335-356 (441)
266 1rd5_A Tryptophan synthase alp 66.5 55 0.0019 27.2 10.7 43 93-135 187-230 (262)
267 2b7n_A Probable nicotinate-nuc 66.5 16 0.00055 31.0 7.1 65 57-135 191-257 (273)
268 2gdq_A YITF; mandelate racemas 66.5 26 0.00088 31.2 8.9 41 151-195 272-312 (382)
269 3usb_A Inosine-5'-monophosphat 66.5 30 0.001 32.2 9.6 126 60-204 256-388 (511)
270 2wkj_A N-acetylneuraminate lya 66.5 53 0.0018 28.2 10.6 120 56-187 29-162 (303)
271 2hsa_B 12-oxophytodienoate red 66.5 28 0.00095 31.4 9.1 79 56-135 257-348 (402)
272 1ydo_A HMG-COA lyase; TIM-barr 66.3 16 0.00053 31.7 7.1 113 56-179 115-239 (307)
273 3ih1_A Methylisocitrate lyase; 66.3 64 0.0022 27.8 12.6 203 66-293 43-267 (305)
274 4hty_A Cellulase; (alpha/beta) 66.1 44 0.0015 29.3 10.3 128 114-244 84-228 (359)
275 3sbf_A Mandelate racemase / mu 66.0 17 0.00059 32.7 7.6 44 150-195 287-330 (401)
276 1o4u_A Type II quinolic acid p 65.9 5.5 0.00019 34.2 4.0 65 57-135 202-268 (285)
277 3r0u_A Enzyme of enolase super 65.8 15 0.00053 32.7 7.2 37 151-190 275-311 (379)
278 1jub_A Dihydroorotate dehydrog 65.6 37 0.0013 29.0 9.6 39 255-293 257-299 (311)
279 1gox_A (S)-2-hydroxy-acid oxid 65.6 34 0.0012 30.4 9.4 70 65-135 239-309 (370)
280 3noy_A 4-hydroxy-3-methylbut-2 65.3 73 0.0025 28.1 13.7 119 56-195 43-176 (366)
281 1s2w_A Phosphoenolpyruvate pho 65.3 43 0.0015 28.7 9.6 71 58-139 169-242 (295)
282 3vcn_A Mannonate dehydratase; 65.3 11 0.00037 34.4 6.1 43 151-195 314-356 (425)
283 3v3w_A Starvation sensing prot 65.2 12 0.00042 33.9 6.5 101 91-195 238-355 (424)
284 3r4e_A Mandelate racemase/muco 65.2 11 0.00038 34.2 6.2 43 151-195 307-349 (418)
285 3my9_A Muconate cycloisomerase 65.1 13 0.00045 33.1 6.6 42 151-195 278-319 (377)
286 3n9k_A Glucan 1,3-beta-glucosi 65.1 25 0.00086 31.6 8.5 57 116-174 74-134 (399)
287 3b4u_A Dihydrodipicolinate syn 65.0 45 0.0015 28.5 9.8 122 56-188 21-158 (294)
288 2bdq_A Copper homeostasis prot 64.9 37 0.0013 27.8 8.6 71 62-135 136-207 (224)
289 3cpr_A Dihydrodipicolinate syn 64.9 67 0.0023 27.5 11.2 105 56-172 34-148 (304)
290 3dgb_A Muconate cycloisomerase 64.8 16 0.00056 32.6 7.2 99 91-194 206-321 (382)
291 3si9_A DHDPS, dihydrodipicolin 64.8 41 0.0014 29.1 9.6 106 56-173 40-155 (315)
292 4eiv_A Deoxyribose-phosphate a 64.7 67 0.0023 27.5 11.5 137 56-207 97-268 (297)
293 1zlp_A PSR132, petal death pro 64.6 56 0.0019 28.4 10.2 15 122-136 244-258 (318)
294 1xky_A Dihydrodipicolinate syn 64.6 56 0.0019 28.0 10.3 105 56-172 30-144 (301)
295 2hzg_A Mandelate racemase/muco 64.6 20 0.00068 32.2 7.8 41 151-195 283-323 (401)
296 3qze_A DHDPS, dihydrodipicolin 64.6 51 0.0018 28.4 10.2 120 56-187 41-173 (314)
297 2jbm_A Nicotinate-nucleotide p 64.4 14 0.00047 31.9 6.4 65 57-135 206-272 (299)
298 2r14_A Morphinone reductase; H 64.4 23 0.00079 31.6 8.0 74 57-135 253-328 (377)
299 3o63_A Probable thiamine-phosp 64.3 61 0.0021 26.8 17.0 178 61-288 45-236 (243)
300 3ivs_A Homocitrate synthase, m 64.3 31 0.0011 31.3 8.9 106 59-179 151-261 (423)
301 3tji_A Mandelate racemase/muco 64.1 15 0.00052 33.3 6.9 44 150-195 308-351 (422)
302 2qq6_A Mandelate racemase/muco 64.1 13 0.00043 33.6 6.4 99 91-195 222-337 (410)
303 3flu_A DHDPS, dihydrodipicolin 64.1 58 0.002 27.8 10.3 106 56-173 25-140 (297)
304 3khj_A Inosine-5-monophosphate 64.1 36 0.0012 30.1 9.2 70 65-135 159-236 (361)
305 3cyj_A Mandelate racemase/muco 63.8 30 0.001 30.6 8.8 83 91-174 200-299 (372)
306 1ub3_A Aldolase protein; schif 63.7 59 0.002 26.5 19.5 177 56-266 16-202 (220)
307 3s5o_A 4-hydroxy-2-oxoglutarat 63.7 51 0.0018 28.3 10.0 76 56-135 32-116 (307)
308 2v5b_A Triosephosphate isomera 63.7 63 0.0022 26.8 13.8 126 95-236 49-188 (244)
309 3l5a_A NADH/flavin oxidoreduct 63.6 17 0.00058 33.0 7.1 75 56-135 261-346 (419)
310 1f6k_A N-acetylneuraminate lya 63.5 69 0.0024 27.2 10.8 120 56-187 21-154 (293)
311 4dxk_A Mandelate racemase / mu 63.5 19 0.00064 32.4 7.4 99 90-194 221-336 (400)
312 2ze3_A DFA0005; organic waste 63.5 44 0.0015 28.4 9.2 88 58-166 167-254 (275)
313 2yxb_A Coenzyme B12-dependent 63.4 41 0.0014 25.8 8.4 68 56-133 56-126 (161)
314 4hnl_A Mandelate racemase/muco 63.4 16 0.00055 33.1 7.0 26 150-175 307-332 (421)
315 2dsk_A Chitinase; catalytic do 63.2 27 0.00092 30.3 8.0 74 122-206 105-181 (311)
316 3s6d_A Putative triosephosphat 63.2 36 0.0012 29.4 8.6 148 121-289 133-304 (310)
317 4dpp_A DHDPS 2, dihydrodipicol 63.0 66 0.0022 28.4 10.6 75 56-134 77-160 (360)
318 3dg3_A Muconate cycloisomerase 63.0 12 0.00039 33.3 5.8 24 151-174 271-294 (367)
319 1kbi_A Cytochrome B2, L-LCR; f 62.8 43 0.0015 31.2 9.9 71 65-135 357-432 (511)
320 1uas_A Alpha-galactosidase; TI 62.8 24 0.00081 31.2 7.8 81 56-136 23-131 (362)
321 1hjs_A Beta-1,4-galactanase; 4 62.8 7.6 0.00026 34.1 4.5 66 104-175 17-82 (332)
322 3fkr_A L-2-keto-3-deoxyarabona 62.6 54 0.0019 28.2 9.9 106 56-170 26-141 (309)
323 3ffs_A Inosine-5-monophosphate 62.6 38 0.0013 30.5 9.1 69 66-135 199-275 (400)
324 3q58_A N-acetylmannosamine-6-p 62.6 63 0.0021 26.4 17.3 170 54-273 31-214 (229)
325 3daq_A DHDPS, dihydrodipicolin 62.5 47 0.0016 28.3 9.5 120 56-187 20-152 (292)
326 3jva_A Dipeptide epimerase; en 62.4 15 0.00051 32.4 6.4 43 151-195 270-312 (354)
327 3erp_A Putative oxidoreductase 62.3 80 0.0027 27.6 14.8 124 56-194 61-206 (353)
328 1sjd_A N-acylamino acid racema 62.2 59 0.002 28.5 10.4 40 150-194 268-308 (368)
329 3rcy_A Mandelate racemase/muco 62.0 17 0.00059 33.1 6.9 98 91-194 215-329 (433)
330 3qfe_A Putative dihydrodipicol 61.9 40 0.0014 29.2 9.0 108 56-173 29-146 (318)
331 3na8_A Putative dihydrodipicol 61.9 50 0.0017 28.5 9.6 106 56-173 42-157 (315)
332 3a5f_A Dihydrodipicolinate syn 61.8 53 0.0018 27.9 9.7 76 56-135 19-103 (291)
333 2d73_A Alpha-glucosidase SUSB; 61.8 55 0.0019 31.9 10.4 112 56-172 368-507 (738)
334 2ox4_A Putative mandelate race 61.7 10 0.00034 34.2 5.2 99 91-195 221-336 (403)
335 3p3b_A Mandelate racemase/muco 61.7 32 0.0011 30.7 8.6 98 91-195 213-330 (392)
336 2yxg_A DHDPS, dihydrodipicolin 61.7 53 0.0018 27.9 9.6 121 56-188 18-151 (289)
337 2ekc_A AQ_1548, tryptophan syn 61.6 41 0.0014 28.2 8.8 79 56-135 131-234 (262)
338 1f6y_A 5-methyltetrahydrofolat 61.5 71 0.0024 26.7 14.5 190 56-270 22-230 (262)
339 3ih1_A Methylisocitrate lyase; 61.4 20 0.00069 31.0 6.8 67 55-127 140-209 (305)
340 1ur4_A Galactanase; hydrolase, 61.4 91 0.0031 27.9 14.7 135 66-206 55-234 (399)
341 3ik4_A Mandelate racemase/muco 61.4 16 0.00054 32.4 6.4 42 150-194 274-315 (365)
342 1rd5_A Tryptophan synthase alp 61.3 70 0.0024 26.5 18.2 184 57-272 30-233 (262)
343 1qo2_A Molecule: N-((5-phospho 61.2 23 0.00079 29.1 7.1 71 56-135 144-223 (241)
344 4fo4_A Inosine 5'-monophosphat 61.1 44 0.0015 29.6 9.2 75 56-135 158-240 (366)
345 3eez_A Putative mandelate race 61.1 19 0.00065 32.1 6.9 76 106-194 237-313 (378)
346 2r8w_A AGR_C_1641P; APC7498, d 61.1 62 0.0021 28.2 10.1 104 56-171 52-165 (332)
347 2fym_A Enolase; RNA degradosom 61.1 37 0.0013 30.8 8.9 116 56-191 267-385 (431)
348 3f4w_A Putative hexulose 6 pho 61.0 17 0.00059 29.1 6.1 38 97-135 148-187 (211)
349 1m6j_A TIM, TPI, triosephospha 61.0 74 0.0025 26.7 12.5 143 113-270 78-242 (261)
350 2jgq_A Triosephosphate isomera 61.0 69 0.0024 26.4 16.1 134 121-270 74-218 (233)
351 3eoo_A Methylisocitrate lyase; 61.0 79 0.0027 27.1 16.6 170 113-291 27-207 (298)
352 3bh1_A UPF0371 protein DIP2346 60.8 31 0.0011 31.1 7.9 96 113-214 52-152 (507)
353 3s5o_A 4-hydroxy-2-oxoglutarat 60.8 80 0.0027 27.1 10.7 101 89-194 31-140 (307)
354 2ps2_A Putative mandelate race 60.8 19 0.00065 31.9 6.8 43 150-195 274-316 (371)
355 3bo9_A Putative nitroalkan dio 60.7 33 0.0011 29.8 8.3 66 66-135 138-205 (326)
356 3bw2_A 2-nitropropane dioxygen 60.7 27 0.00093 30.9 7.9 70 65-135 158-237 (369)
357 3rr1_A GALD, putative D-galact 60.7 72 0.0025 28.6 10.7 79 56-135 124-212 (405)
358 1ug6_A Beta-glycosidase; gluco 60.6 17 0.00058 33.1 6.5 57 117-174 59-118 (431)
359 4dye_A Isomerase; enolase fami 60.5 37 0.0013 30.5 8.7 125 57-194 195-337 (398)
360 1mo0_A TIM, triosephosphate is 60.4 78 0.0027 26.8 14.0 149 121-290 99-267 (275)
361 3o1n_A 3-dehydroquinate dehydr 60.4 77 0.0026 26.8 20.9 148 56-232 49-212 (276)
362 3igs_A N-acetylmannosamine-6-p 60.4 69 0.0024 26.2 17.8 173 54-273 31-214 (232)
363 2chr_A Chloromuconate cycloiso 60.1 19 0.00063 31.9 6.7 128 56-194 169-315 (370)
364 3dz1_A Dihydrodipicolinate syn 60.1 71 0.0024 27.5 10.3 106 56-174 26-142 (313)
365 1xg4_A Probable methylisocitra 60.0 40 0.0014 28.9 8.4 15 122-136 222-236 (295)
366 1o5k_A DHDPS, dihydrodipicolin 59.9 55 0.0019 28.1 9.4 121 56-188 30-163 (306)
367 3i6e_A Muconate cycloisomerase 59.7 16 0.00054 32.7 6.2 42 151-195 279-320 (385)
368 3vnd_A TSA, tryptophan synthas 59.7 29 0.00099 29.3 7.4 43 93-135 192-235 (267)
369 1eep_A Inosine 5'-monophosphat 59.5 42 0.0014 30.1 9.0 69 65-135 208-285 (404)
370 3ahy_A Beta-glucosidase; cellu 59.5 17 0.00057 33.6 6.3 58 116-174 63-125 (473)
371 1viz_A PCRB protein homolog; s 59.3 57 0.0019 27.0 9.0 69 57-135 140-210 (240)
372 2o9p_A Beta-glucosidase B; fam 59.2 15 0.0005 33.8 5.9 56 117-174 69-127 (454)
373 3kts_A Glycerol uptake operon 59.2 66 0.0023 25.6 14.5 159 56-271 17-181 (192)
374 3bg3_A Pyruvate carboxylase, m 59.1 40 0.0014 32.9 9.2 94 56-160 258-358 (718)
375 1aw2_A Triosephosphate isomera 58.9 80 0.0027 26.4 11.5 103 121-237 82-197 (256)
376 2hxt_A L-fuconate dehydratase; 58.8 31 0.0011 31.4 8.1 82 91-172 254-351 (441)
377 3tqp_A Enolase; energy metabol 58.7 22 0.00075 32.4 6.9 111 56-190 263-380 (428)
378 2ehh_A DHDPS, dihydrodipicolin 58.7 57 0.002 27.8 9.3 121 56-188 18-151 (294)
379 3ahx_A Beta-glucosidase A; cel 58.6 18 0.00063 33.1 6.4 56 117-173 61-119 (453)
380 1j93_A UROD, uroporphyrinogen 58.5 92 0.0032 27.1 12.6 69 65-136 199-275 (353)
381 2v9d_A YAGE; dihydrodipicolini 58.3 68 0.0023 28.1 9.9 76 56-135 49-133 (343)
382 3m5v_A DHDPS, dihydrodipicolin 58.2 52 0.0018 28.1 9.0 121 56-188 25-159 (301)
383 3nl6_A Thiamine biosynthetic b 58.0 1.2E+02 0.0042 28.3 16.2 116 60-210 26-144 (540)
384 1v08_A Beta-glucosidase; glyco 58.0 20 0.00067 33.5 6.6 57 117-174 80-141 (512)
385 1yad_A Regulatory protein TENI 57.9 32 0.0011 27.8 7.3 73 57-135 119-192 (221)
386 2vxn_A Triosephosphate isomera 57.9 82 0.0028 26.3 12.8 190 56-270 17-236 (251)
387 1o66_A 3-methyl-2-oxobutanoate 57.9 25 0.00085 29.9 6.6 67 57-134 93-180 (275)
388 2p8b_A Mandelate racemase/muco 57.8 28 0.00095 30.7 7.4 42 151-195 273-314 (369)
389 2hmc_A AGR_L_411P, dihydrodipi 57.7 75 0.0026 27.8 10.0 121 56-187 44-174 (344)
390 4g1k_A Triosephosphate isomera 57.5 87 0.003 26.5 10.1 103 121-237 105-220 (272)
391 3mwc_A Mandelate racemase/muco 57.5 17 0.0006 32.6 6.0 39 151-192 291-329 (400)
392 2dga_A Beta-glucosidase; alpha 57.5 19 0.00066 34.0 6.4 56 117-173 130-188 (565)
393 3tha_A Tryptophan synthase alp 57.5 83 0.0029 26.2 15.4 202 57-289 26-248 (252)
394 2e3z_A Beta-glucosidase; TIM b 57.3 20 0.00068 33.1 6.4 57 116-173 63-124 (465)
395 1to3_A Putative aldolase YIHT; 57.1 34 0.0012 29.5 7.6 108 65-172 114-254 (304)
396 1tre_A Triosephosphate isomera 57.0 86 0.0029 26.2 11.2 134 121-270 80-234 (255)
397 1vhc_A Putative KHG/KDPG aldol 57.0 78 0.0027 25.8 13.6 109 56-203 26-136 (224)
398 1kko_A 3-methylaspartate ammon 57.0 1.1E+02 0.0037 27.4 12.4 78 106-195 301-379 (413)
399 1wuf_A Hypothetical protein LI 56.9 18 0.00062 32.4 6.1 25 150-174 287-311 (393)
400 1e4i_A Beta-glucosidase; hydro 56.9 21 0.00073 32.6 6.5 57 117-174 60-119 (447)
401 3ro6_B Putative chloromuconate 56.8 11 0.00037 33.4 4.4 42 151-195 272-313 (356)
402 2agk_A 1-(5-phosphoribosyl)-5- 56.8 46 0.0016 27.8 8.2 200 62-291 41-260 (260)
403 1v02_A Dhurrinase, dhurrinase- 56.8 21 0.00071 33.8 6.6 56 117-173 132-192 (565)
404 2nuw_A 2-keto-3-deoxygluconate 56.6 80 0.0027 26.8 9.9 74 56-135 17-98 (288)
405 2rfg_A Dihydrodipicolinate syn 56.6 51 0.0017 28.2 8.6 105 56-172 18-132 (297)
406 1vrd_A Inosine-5'-monophosphat 56.6 53 0.0018 30.3 9.4 75 56-135 287-369 (494)
407 1szn_A Alpha-galactosidase; (b 56.4 29 0.001 31.4 7.4 82 56-137 26-134 (417)
408 1twd_A Copper homeostasis prot 56.4 20 0.0007 30.0 5.8 66 64-135 133-198 (256)
409 2z6i_A Trans-2-enoyl-ACP reduc 56.3 43 0.0015 29.1 8.3 67 65-135 123-191 (332)
410 3vav_A 3-methyl-2-oxobutanoate 56.3 32 0.0011 29.2 7.0 67 57-134 104-192 (275)
411 1xi3_A Thiamine phosphate pyro 55.9 74 0.0025 25.1 15.9 63 60-135 27-93 (215)
412 1cbg_A Cyanogenic beta-glucosi 55.9 20 0.00069 33.3 6.2 56 117-173 75-135 (490)
413 2f6u_A GGGPS, (S)-3-O-geranylg 55.9 76 0.0026 26.1 9.2 69 57-135 147-218 (234)
414 2qw5_A Xylose isomerase-like T 55.8 47 0.0016 28.5 8.5 47 60-108 32-80 (335)
415 1r0m_A N-acylamino acid racema 55.7 59 0.002 28.7 9.2 40 150-194 274-314 (375)
416 1h1y_A D-ribulose-5-phosphate 55.7 36 0.0012 27.7 7.3 62 72-135 138-201 (228)
417 2r91_A 2-keto-3-deoxy-(6-phosp 55.2 68 0.0023 27.1 9.2 73 56-134 16-96 (286)
418 4h1z_A Enolase Q92ZS5; dehydra 55.1 22 0.00074 32.2 6.3 85 91-177 244-344 (412)
419 3dx5_A Uncharacterized protein 55.0 60 0.002 26.9 8.9 125 61-191 17-162 (286)
420 3gd6_A Muconate cycloisomerase 55.0 25 0.00085 31.5 6.6 127 57-194 168-314 (391)
421 1geq_A Tryptophan synthase alp 54.9 85 0.0029 25.6 17.7 184 57-272 17-223 (248)
422 2jf7_A Strictosidine-O-beta-D- 54.8 24 0.00082 33.1 6.6 56 117-173 99-159 (532)
423 1p0k_A Isopentenyl-diphosphate 54.7 63 0.0022 28.2 9.2 30 106-135 251-280 (349)
424 3cwo_X Beta/alpha-barrel prote 54.5 79 0.0027 25.0 13.2 99 62-175 133-233 (237)
425 3pm6_A Putative fructose-bisph 54.3 1E+02 0.0035 26.5 9.9 77 56-137 172-253 (306)
426 1wcg_A Thioglucosidase, myrosi 54.3 24 0.00084 32.4 6.5 56 117-173 61-120 (464)
427 2c6q_A GMP reductase 2; TIM ba 54.3 81 0.0028 27.7 9.7 70 65-135 175-252 (351)
428 3o63_A Probable thiamine-phosp 54.3 19 0.00065 30.0 5.3 74 56-135 143-219 (243)
429 1jcn_A Inosine monophosphate d 54.1 35 0.0012 31.7 7.7 70 59-136 254-325 (514)
430 1yxy_A Putative N-acetylmannos 54.1 29 0.00099 28.3 6.5 67 65-135 146-215 (234)
431 2dh2_A 4F2 cell-surface antige 54.0 8.3 0.00028 35.0 3.3 52 150-203 79-141 (424)
432 3nav_A Tryptophan synthase alp 54.0 42 0.0014 28.4 7.5 43 93-135 194-237 (271)
433 1xm3_A Thiazole biosynthesis p 54.0 46 0.0016 27.9 7.8 30 106-135 178-207 (264)
434 1icp_A OPR1, 12-oxophytodienoa 53.9 15 0.00052 32.8 5.0 18 91-108 254-271 (376)
435 2h6r_A Triosephosphate isomera 53.9 86 0.0029 25.3 11.9 127 121-274 75-204 (219)
436 3s5s_A Mandelate racemase/muco 53.9 16 0.00056 32.7 5.2 41 151-194 276-316 (389)
437 3uj2_A Enolase 1; enzyme funct 53.6 32 0.0011 31.5 7.1 114 56-191 289-407 (449)
438 1p4c_A L(+)-mandelate dehydrog 53.5 39 0.0013 30.1 7.6 67 65-135 239-307 (380)
439 1vcf_A Isopentenyl-diphosphate 53.5 42 0.0015 29.1 7.8 72 56-136 193-286 (332)
440 3u9i_A Mandelate racemase/muco 53.5 16 0.00055 32.8 5.1 42 150-194 304-345 (393)
441 1n7k_A Deoxyribose-phosphate a 53.4 94 0.0032 25.6 13.2 175 56-266 33-218 (234)
442 3fj0_A Beta-glucosidase; BGLB, 53.1 25 0.00086 32.3 6.4 57 117-174 81-140 (465)
443 1w3i_A EDA, 2-keto-3-deoxy glu 53.0 1E+02 0.0034 26.2 9.9 81 48-134 9-97 (293)
444 2czd_A Orotidine 5'-phosphate 53.0 85 0.0029 25.0 10.4 183 56-289 9-203 (208)
445 2qdd_A Mandelate racemase/muco 53.0 67 0.0023 28.3 9.2 43 150-195 272-314 (378)
446 2e9l_A Cytosolic beta-glucosid 53.0 26 0.0009 32.3 6.5 57 116-173 58-118 (469)
447 3tva_A Xylose isomerase domain 52.7 80 0.0027 26.2 9.3 82 57-139 100-186 (290)
448 3iar_A Adenosine deaminase; pu 52.6 59 0.002 28.8 8.5 44 94-137 193-238 (367)
449 2q02_A Putative cytoplasmic pr 52.4 59 0.002 26.6 8.3 41 68-108 60-100 (272)
450 3e96_A Dihydrodipicolinate syn 52.2 47 0.0016 28.7 7.8 76 56-135 30-113 (316)
451 1ht6_A AMY1, alpha-amylase iso 52.2 10 0.00034 34.2 3.5 72 91-177 19-93 (405)
452 3hg3_A Alpha-galactosidase A; 52.1 70 0.0024 28.8 9.0 80 56-135 33-139 (404)
453 1qox_A Beta-glucosidase; hydro 52.1 28 0.00096 31.9 6.5 58 116-174 59-119 (449)
454 1lwj_A 4-alpha-glucanotransfer 52.0 11 0.00037 34.3 3.8 28 150-177 67-94 (441)
455 2e6f_A Dihydroorotate dehydrog 51.8 43 0.0015 28.7 7.4 18 256-273 260-277 (314)
456 4ef8_A Dihydroorotate dehydrog 51.6 52 0.0018 29.0 8.0 80 56-135 204-306 (354)
457 1vem_A Beta-amylase; beta-alph 51.5 17 0.00058 34.0 5.0 53 117-170 31-83 (516)
458 3apt_A Methylenetetrahydrofola 51.4 1.2E+02 0.004 26.1 10.6 39 156-195 61-99 (310)
459 3qst_A Triosephosphate isomera 51.4 1.1E+02 0.0036 25.6 13.4 135 121-270 82-237 (255)
460 3d0c_A Dihydrodipicolinate syn 51.3 54 0.0018 28.3 8.0 76 56-135 30-113 (314)
461 1yxy_A Putative N-acetylmannos 51.2 95 0.0033 25.0 14.5 170 56-273 31-219 (234)
462 3th6_A Triosephosphate isomera 51.2 1.1E+02 0.0036 25.5 13.1 134 121-270 80-233 (249)
463 2vc6_A MOSA, dihydrodipicolina 51.2 61 0.0021 27.6 8.2 79 56-134 18-101 (292)
464 1x7f_A Outer surface protein; 51.0 55 0.0019 29.2 8.0 28 56-83 181-208 (385)
465 3iwp_A Copper homeostasis prot 51.0 71 0.0024 27.2 8.3 72 63-139 170-242 (287)
466 3inp_A D-ribulose-phosphate 3- 50.9 84 0.0029 26.1 8.8 28 107-135 196-223 (246)
467 3jr2_A Hexulose-6-phosphate sy 50.9 6.6 0.00022 32.0 1.9 41 94-135 154-194 (218)
468 3n2t_A Putative oxidoreductase 50.8 1.2E+02 0.0043 26.2 13.8 120 56-190 49-189 (348)
469 1e4m_M Myrosinase MA1; hydrola 50.6 27 0.00093 32.5 6.2 56 117-173 79-139 (501)
470 3tdn_A FLR symmetric alpha-bet 50.4 3.3 0.00011 34.5 0.0 72 60-135 157-229 (247)
471 3c2e_A Nicotinate-nucleotide p 50.3 8.7 0.0003 33.1 2.6 56 70-135 217-277 (294)
472 3ekg_A Mandelate racemase/muco 50.3 73 0.0025 28.6 8.9 84 90-173 221-321 (404)
473 2gjl_A Hypothetical protein PA 50.2 47 0.0016 28.7 7.5 68 66-135 132-201 (328)
474 3lye_A Oxaloacetate acetyl hyd 50.2 1.2E+02 0.0042 26.0 15.5 169 114-291 31-214 (307)
475 1z41_A YQJM, probable NADH-dep 50.2 61 0.0021 28.2 8.2 82 55-136 133-250 (338)
476 1gvf_A Tagatose-bisphosphate a 50.1 73 0.0025 27.1 8.4 74 57-135 156-232 (286)
477 2j78_A Beta-glucosidase A; fam 50.1 32 0.0011 31.7 6.5 56 117-173 83-141 (468)
478 1m3u_A 3-methyl-2-oxobutanoate 50.0 34 0.0012 28.8 6.2 111 54-168 58-176 (264)
479 3q94_A Fructose-bisphosphate a 50.0 1.2E+02 0.0041 25.8 10.9 103 57-164 160-272 (288)
480 4aie_A Glucan 1,6-alpha-glucos 49.8 9 0.00031 35.8 2.9 28 150-177 77-104 (549)
481 3oix_A Putative dihydroorotate 49.6 74 0.0025 27.9 8.6 80 56-135 204-304 (345)
482 4gqr_A Pancreatic alpha-amylas 49.5 7.3 0.00025 35.7 2.2 28 150-177 74-101 (496)
483 3f5l_A Beta-glucosidase; beta- 49.4 27 0.00093 32.3 6.0 56 117-173 75-133 (481)
484 2z1k_A (NEO)pullulanase; hydro 49.4 10 0.00036 34.8 3.2 75 91-180 48-125 (475)
485 1vr6_A Phospho-2-dehydro-3-deo 49.2 1.4E+02 0.0047 26.3 19.9 126 57-203 118-246 (350)
486 4e4f_A Mannonate dehydratase; 48.8 23 0.00079 32.1 5.4 43 151-195 315-357 (426)
487 3tha_A Tryptophan synthase alp 48.8 1.2E+02 0.004 25.3 11.2 65 92-162 184-249 (252)
488 1g94_A Alpha-amylase; beta-alp 48.7 18 0.00062 32.9 4.7 28 150-177 62-89 (448)
489 1xi3_A Thiamine phosphate pyro 48.7 46 0.0016 26.4 6.8 70 56-135 116-190 (215)
490 2qf7_A Pyruvate carboxylase pr 48.7 73 0.0025 33.0 9.6 78 56-139 706-788 (1165)
491 1ypf_A GMP reductase; GUAC, pu 48.5 77 0.0026 27.5 8.6 69 64-135 162-239 (336)
492 1kcz_A Beta-methylaspartase; b 48.4 1.5E+02 0.0051 26.5 11.8 44 150-195 336-379 (413)
493 3hbl_A Pyruvate carboxylase; T 48.4 73 0.0025 33.0 9.5 79 56-139 689-771 (1150)
494 3zwt_A Dihydroorotate dehydrog 48.3 1.4E+02 0.0049 26.2 10.7 169 118-293 164-355 (367)
495 2i9e_A Triosephosphate isomera 48.1 1.2E+02 0.0042 25.3 13.0 134 121-270 79-232 (259)
496 1gnx_A Beta-glucosidase; hydro 48.1 39 0.0013 31.2 6.9 56 117-173 73-131 (479)
497 2qr6_A IMP dehydrogenase/GMP r 48.1 98 0.0034 27.4 9.5 168 93-277 142-314 (393)
498 1wue_A Mandelate racemase/muco 48.0 17 0.00059 32.4 4.4 25 150-174 287-311 (386)
499 3stp_A Galactonate dehydratase 48.0 1.1E+02 0.0038 27.4 9.8 77 56-133 178-262 (412)
500 1hjs_A Beta-1,4-galactanase; 4 47.8 1.4E+02 0.0047 25.9 17.3 139 67-206 35-214 (332)
No 1
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=100.00 E-value=5.2e-44 Score=328.51 Aligned_cols=286 Identities=57% Similarity=0.944 Sum_probs=255.7
Q ss_pred hhccC-CCeeEEEEEeecccCCCCCCCCCCCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCch
Q 020848 12 SISSS-MEEVQQCTLLSIKTGGCSEDCSYCPQSSRYDTGVKGQKLMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKT 90 (320)
Q Consensus 12 r~~~~-~~~v~~~~~l~~~t~~C~~~C~fC~~~~~~~~~~~~~~~~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~ 90 (320)
|+++| |++|.++.+++++|++|+++|.||.++.....+..++..+++|+|++.++.+.+.|++.|+|+||+.. +.+.
T Consensus 54 ~~~~~~~~~v~~~~~i~i~t~~C~~~C~yC~~~~~~~~~~~~~~~~s~eei~~~~~~~~~~g~~~i~~~gg~~~--p~~~ 131 (369)
T 1r30_A 54 HRQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAAGSTRFCMGAAWKN--PHER 131 (369)
T ss_dssp HHHHSCTTCCEEEEEEEEECSCBSSCCSSCSCBTTSCTTCCCCCCCCHHHHHHHHHHHHHTTCSEEEEEECCSS--CCTT
T ss_pred HHHhcCCCEEEEEEEEEEECCCCcccCccCCCCCcCCCCCcccccCCHHHHHHHHHHHHHcCCcEEEEEeCCCC--CCcC
Confidence 33444 79999999999779999999999998764322333456689999999999988899999999876421 2235
Q ss_pred hHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeee
Q 020848 91 NFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVC 170 (320)
Q Consensus 91 ~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~ 170 (320)
.++++.++++.+++.++++.+++|.++++.++.|+++|++++++++|+.++.|+.+++++++++++++++.+++.|+.+.
T Consensus 132 ~~~~l~~ll~~ik~~g~~i~~t~G~l~~e~l~~L~~aGvd~v~i~les~~e~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~ 211 (369)
T 1r30_A 132 DMPYLEQMVQGVKAMGLEACMTLGTLSESQAQRLANAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVC 211 (369)
T ss_dssp THHHHHHHHHHHHHTTSEEEEECSSCCHHHHHHHHHHCCCEEECCCBSCHHHHHHHCCSSCHHHHHHHHHHHHHHHCEEE
T ss_pred CHHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHCCCCEEeecCcCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeee
Confidence 67899999999998888888899999999999999999999999999988999999998999999999999999999999
Q ss_pred eeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCccccc
Q 020848 171 SGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRF 250 (320)
Q Consensus 171 ~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~ 250 (320)
+++|+|++++.+++.++++++++++.++++++++.|+|.|||++.+.++++.++++++++.+|.++|+..++++++|.++
T Consensus 212 ~~~I~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~l~p~~gT~l~~~~~~~~~~~~~~~~~~r~~l~~~~i~i~~~~~~l 291 (369)
T 1r30_A 212 SGGIVGLGETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVRLSAGREQM 291 (369)
T ss_dssp CCEEECSSCCHHHHHHHHHHHHSSSSCCSEEEEEECCCCTTSTTSSCCCCCHHHHHHHHHHHHHHCTTSEEEEESSGGGS
T ss_pred eeeEeeCCCCHHHHHHHHHHHHhhcCCCCEEEeeeeeecCCCcCCCCCCCCHHHHHHHHHHHHHhCCCCceEeecchhhc
Confidence 99999999999999999999999974478999999999999999988889999999999999999999999999999988
Q ss_pred ChhHHHHHHHcCCceEeeCCccccCCCCChhHHHHHHHHcCCCcCCCCC
Q 020848 251 SMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKVLGLTPKAPSF 299 (320)
Q Consensus 251 ~~~~~~~~~~~Gan~~~~~~~~~~~~~~~~~~~~~~i~~~G~~p~~~~~ 299 (320)
.+..++.++.+|||+++.|+++.++++++++++.++|+++|+.|.+|..
T Consensus 292 ~~~~~~~~l~~Gan~~~~g~~~~t~~~~~~~~~~~~i~~~g~~~~~~~~ 340 (369)
T 1r30_A 292 NEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGLNPQQTAV 340 (369)
T ss_dssp CHHHHHHHHHHTCCEEECSSBSSSSBCCCHHHHHHHHHHTTCCSCCCC-
T ss_pred ChHHHHHHhhCCCceEEeCCeeeCCCCCCHHHHHHHHHHcCCCeecccc
Confidence 8777899999999999999989999999999999999999999999975
No 2
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=100.00 E-value=4.2e-44 Score=326.98 Aligned_cols=283 Identities=18% Similarity=0.304 Sum_probs=244.9
Q ss_pred HhhhccCCCeeEEEEEeecccCCCCCCCCCCCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc
Q 020848 10 LFSISSSMEEVQQCTLLSIKTGGCSEDCSYCPQSSRYDTGVKGQKLMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK 89 (320)
Q Consensus 10 ~~r~~~~~~~v~~~~~l~~~t~~C~~~C~fC~~~~~~~~~~~~~~~~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~ 89 (320)
..|++++|+.|+++.+|+ +|++|+++|.||+++... ...++. +++|+|++.++.+.+.|++.|+|+||.. |
T Consensus 49 ~~r~~~~g~~v~~~~~i~-~t~~C~~~C~fC~~~~~~--~~~~~~-ls~eei~~~~~~~~~~G~~~i~l~gGe~-----p 119 (350)
T 3t7v_A 49 KVRDHYFGNRVFLNCFIY-FSTYCKNQCSFCYYNCRN--EINRYR-LTMEEIKETCKTLKGAGFHMVDLTMGED-----P 119 (350)
T ss_dssp HHHHHHHTTEEEEEEEEE-EECCCCCCCTTCTTCTTS--CCCCCB-CCHHHHHHHHHHHTTSCCSEEEEEECCC-----H
T ss_pred HHHHHHCCCEEEEEEeee-cCCCcCCCCCcCCCcCcC--CCCcee-CCHHHHHHHHHHHHHCCCCEEEEeeCCC-----C
Confidence 456677899999999999 699999999999997642 334455 8999999999999889999999987642 3
Q ss_pred hh---HHHHHHHHHHhhh-cCceEEEeCCCCCHHHHHHHHHhccCeeccCcccc-HHHHhhhCCCCCHHHHHHHHHHHHH
Q 020848 90 TN---FNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTS-REFYSKIITTRSYDERLETLKHVRE 164 (320)
Q Consensus 90 ~~---~~~l~~~i~~~k~-~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~let~-~~~~~~i~~~~~~~~~l~~i~~a~~ 164 (320)
.. .+++.++++.+|+ .++.+.+++|.++++.+++|+++|++++.+++|+. +++|+.+++++++++++++++.+++
T Consensus 120 ~~~~~~~~~~~l~~~ik~~~~i~i~~s~g~~~~e~l~~L~~aG~~~i~i~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~ 199 (350)
T 3t7v_A 120 YYYEDPNRFVELVQIVKEELGLPIMISPGLMDNATLLKAREKGANFLALYQETYDTELYRKLRVGQSFDGRVNARRFAKQ 199 (350)
T ss_dssp HHHHSTHHHHHHHHHHHHHHCSCEEEECSSCCHHHHHHHHHTTEEEEECCCBCSCHHHHHHHSTTCCHHHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHHHhhcCceEEEeCCCCCHHHHHHHHHcCCCEEEEeeecCCHHHHHHhCCCCCHHHHHHHHHHHHH
Confidence 33 4788999999884 57888889999999999999999999999999999 9999999999999999999999999
Q ss_pred cCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecC
Q 020848 165 AGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLS 244 (320)
Q Consensus 165 ~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~ 244 (320)
.|+++++++|+|++||.+|+.++++++++++ ++++++++|+|.||||+++.++++.++.+++++++|+++|+..|+.+
T Consensus 200 ~Gi~v~~~~i~Glget~e~~~~~l~~l~~l~--~~~v~~~~f~p~~gT~l~~~~~~~~~e~l~~ia~~Rl~lp~~~I~a~ 277 (350)
T 3t7v_A 200 QGYCVEDGILTGVGNDIESTILSLRGMSTND--PDMVRVMTFLPQEGTPLEGFRDKSNLSELKIISVLRLMFPKRLIPAS 277 (350)
T ss_dssp HTCEEEEEEEESSSCCHHHHHHHHHHHHHTC--CSEEEEEECCCCTTSTTTTCCCCCCCCHHHHHHHHHHHSTTSBCEEE
T ss_pred cCCeEccceEeecCCCHHHHHHHHHHHHhCC--CCEEEecceeeCCCCcCccCCCCChHHHHHHHHHHHHhCCCcCcccc
Confidence 9999999999999999999999999999998 78999999999999999988888999999999999999999766653
Q ss_pred CcccccChhHHHHHHHcCCceEee---CC----ccccC------CCCChhHHHHHHHHcCCCcCCCCCCcCCcc
Q 020848 245 AGRVRFSMPEQALCFLAGANSIFT---GE----KLLTT------PNNDFDADQLMFKVLGLTPKAPSFHEGEAN 305 (320)
Q Consensus 245 ~g~~~~~~~~~~~~~~~Gan~~~~---~~----~~~~~------~~~~~~~~~~~i~~~G~~p~~~~~~~~~~~ 305 (320)
|...+......++.+|||++.. .+ +.... ..++.++++++|+++||+|++|+|.|++..
T Consensus 278 --~~~~g~~~~~~~l~~Gan~~~~~~~~~~~~ag~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~r~~~y~~~~ 349 (350)
T 3t7v_A 278 --LDLEGIDGMVLRLNAGANIVTSILPPDSQLEGVANYDRDLEERDRDIKSVVRRLEIMGMKPARQADFEAVLG 349 (350)
T ss_dssp --HHHHHHHHHHHHHHTTCCEEEEECCSSCCCCCSSCTTTTCSSCCCCHHHHHHHHHHHTCEECCHHHHHTTCC
T ss_pred --ccccChhHHHHHHhcCCceecCCCCCCCCCCCCCCCcccchhccCCHHHHHHHHHHcCCccccHHHHHHHhc
Confidence 5544445678899999999843 33 11111 246899999999999999999999999864
No 3
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=100.00 E-value=2.3e-39 Score=295.51 Aligned_cols=283 Identities=21% Similarity=0.305 Sum_probs=245.1
Q ss_pred hHHhhhccCCCeeEEEEEeecccCCCCCCCCCCCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHcCCCEEEEecccCCCCC
Q 020848 8 TLLFSISSSMEEVQQCTLLSIKTGGCSEDCSYCPQSSRYDTGVKGQKLMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIG 87 (320)
Q Consensus 8 ~~~~r~~~~~~~v~~~~~l~~~t~~C~~~C~fC~~~~~~~~~~~~~~~~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~g 87 (320)
+.+.|++++|+.|+++.+++ .|++|+++|.||.++... ....++. +++|+|++.++.+.+.|++.|+|+||..
T Consensus 39 A~~ir~~~~g~~v~~~~~i~-~t~~C~~~C~fC~~~~~~-~~~~~~~-ls~eei~~~i~~~~~~g~~~i~~~gGe~---- 111 (348)
T 3iix_A 39 ADEIRRKYVGDEVHIRAIIE-FSNVCRKNCLYCGLRRDN-KNLKRYR-MTPEEIVERARLAVQFGAKTIVLQSGED---- 111 (348)
T ss_dssp HHHHHHHHHCSEEEEEEEEE-EECCCSCCCTTCTTCTTC-CSSCCCB-CCHHHHHHHHHHHHHTTCSEEEEEESCC----
T ss_pred HHHHHHHHcCCEEEEEEEeE-ecCCcCCcCccCCCCCCC-CCcCcee-CCHHHHHHHHHHHHHCCCCEEEEEeCCC----
Confidence 34456677899999999999 599999999999987532 2233444 8999999999999999999999987642
Q ss_pred Cchh-HHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeeccCcccc-HHHHhhhCCCCCHHHHHHHHHHHHHc
Q 020848 88 RKTN-FNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTS-REFYSKIITTRSYDERLETLKHVREA 165 (320)
Q Consensus 88 e~~~-~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~let~-~~~~~~i~~~~~~~~~l~~i~~a~~~ 165 (320)
|.. .+++.++++.+++.++.+.+++|.++++.++.|+++|++.+.+++|+. +++|+.+++++++++++++++.+++.
T Consensus 112 -p~~~~~~~~~li~~i~~~~~~i~~s~g~l~~e~l~~L~~ag~~~v~i~let~~~~~~~~i~~~~~~~~~~~~i~~~~~~ 190 (348)
T 3iix_A 112 -PYXMPDVISDIVKEIKKMGVAVTLSLGEWPREYYEKWKEAGADRYLLRHETANPVLHRKLRPDTSFENRLNCLLTLKEL 190 (348)
T ss_dssp -GGGTTHHHHHHHHHHHTTSCEEEEECCCCCHHHHHHHHHHTCCEEECCCBCSCHHHHHHHSTTSCHHHHHHHHHHHHHT
T ss_pred -CCccHHHHHHHHHHHHhcCceEEEecCCCCHHHHHHHHHhCCCEEeeeeeeCCHHHHHHhCCCcCHHHHHHHHHHHHHh
Confidence 322 388999999999768888889999999999999999999999999999 99999999988999999999999999
Q ss_pred CCeeeeeEEEEe-CCCHHHHHHHHHHHhcCCCCCCeeeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecC
Q 020848 166 GINVCSGGIIGL-GEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLS 244 (320)
Q Consensus 166 Gi~v~~~~i~Gl-get~ed~~~~l~~l~~l~~~~~~v~~~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~ 244 (320)
|+.+.+++|+|+ +++.+++.++++++++++ ++++.+++|+|.|||++.+.++.+.++.+++++++|+++|+..++++
T Consensus 191 Gi~v~~~~i~G~p~et~e~~~~~~~~l~~l~--~~~i~i~~~~p~~gt~l~~~~~~~~~e~~~~~a~~R~~lp~~~i~~~ 268 (348)
T 3iix_A 191 GYETGAGSMVGLPGQTIDDLVDDLLFLKEHD--FDMVGIGPFIPHPDTPLANEKKGDFTLTLKMVALTRILLPDSNIPAT 268 (348)
T ss_dssp TCEEEECBEESCTTCCHHHHHHHHHHHHHHT--CSEECCEECCCCTTSTTTTSCCCCHHHHHHHHHHHHHHSTTSBCBCC
T ss_pred CCeeccceEEeCCCCCHHHHHHHHHHHHhcC--CCEEeeeeeecCCCCCcccCCCCCHHHHHHHHHHHHHHCCCCCchhc
Confidence 999999999999 999999999999999998 78999999999999999998889999999999999999999989988
Q ss_pred CcccccChhHHHHHHHcCCceEeeC---Ccc-----------cc--CCCCChhHHHHHHHHcCCCcCCCCCC
Q 020848 245 AGRVRFSMPEQALCFLAGANSIFTG---EKL-----------LT--TPNNDFDADQLMFKVLGLTPKAPSFH 300 (320)
Q Consensus 245 ~g~~~~~~~~~~~~~~~Gan~~~~~---~~~-----------~~--~~~~~~~~~~~~i~~~G~~p~~~~~~ 300 (320)
++|..+.+..+..++.+|||+++.. ..| .+ ....+.+++.++|+++|+.|....=+
T Consensus 269 ~~~~~~~~~~~~~~l~~Gan~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~ 340 (348)
T 3iix_A 269 TAMGTIVPGGREITLRCGANVIMPNWTPSPYRQLYQLYPGKICVFEKDTACIPCVMKMIELLGRKPGRDWGG 340 (348)
T ss_dssp HHHHHHSTTHHHHHHTTTCCEECCBCCCTTTGGGCCSSSCCTTTTSCTTCHHHHHHHHHHHTTCEECSSCCC
T ss_pred chhhhcCHHHHHHHHhcCCcEEeCCCCchhcccccccCCCCcccCCCchhhHHHHHHHHHHcCCEeCCCCCC
Confidence 8887777788889999999999732 111 11 12345889999999999999987433
No 4
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=99.92 E-value=2.6e-24 Score=192.11 Aligned_cols=197 Identities=15% Similarity=0.223 Sum_probs=140.0
Q ss_pred EeecccCCCCCCCCCCCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCch-hHHHHHHHHHHhh
Q 020848 25 LLSIKTGGCSEDCSYCPQSSRYDTGVKGQKLMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKT-NFNQILEYVKDIR 103 (320)
Q Consensus 25 ~l~~~t~~C~~~C~fC~~~~~~~~~~~~~~~~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~-~~~~l~~~i~~~k 103 (320)
.+. .+++|+++|.||.++... + ..+.+++++|+++++.+.+.|++.|.|+|+....+|.+. ..+.+.++++.++
T Consensus 7 ~v~-is~GC~~~C~fC~~~~~~--g--~~r~r~~e~i~~ei~~l~~~G~~ei~l~g~~~~~yG~~~~~~~~l~~Ll~~l~ 81 (304)
T 2qgq_A 7 YVK-ISDGCDRGCTFCSIPSFK--G--SLRSRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYRKQALPDLLRRLN 81 (304)
T ss_dssp EEE-SBCCC---------------C--CCCBCCHHHHHHHHHHHHHTTCCEEEEECTTGGGTTHHHHSSCCHHHHHHHHH
T ss_pred EEE-ECCCCCCcCccCCccccC--C--CceeeCHHHHHHHHHHHHHCCCcEEEEEeEcccccCCCCCcHHHHHHHHHHHH
Confidence 455 689999999999886432 2 234479999999999999999999999875444333211 1245666666766
Q ss_pred hc-Cce-E--E-EeCCCCCHHHHHHHHHhc--cCeeccCcccc-HHHHhhhCCCCCHHHHHHHHHHHHH--cCCeeeeeE
Q 020848 104 DM-GME-V--C-CTLGMLEKHQAIELKKAG--LTAYNHNLDTS-REFYSKIITTRSYDERLETLKHVRE--AGINVCSGG 173 (320)
Q Consensus 104 ~~-~~~-i--~-~~~g~l~~e~l~~L~~aG--ld~v~i~let~-~~~~~~i~~~~~~~~~l~~i~~a~~--~Gi~v~~~~ 173 (320)
+. ++. + . +++..++++.++.|+++| ++++.+++|+. +++++.++++.++++++++++.+++ .|+.+.+++
T Consensus 82 ~~~gi~~ir~~~~~p~~l~~e~l~~l~~~g~~~~~l~i~lqs~s~~vl~~m~r~~t~e~~~~~i~~l~~~~~gi~i~~~~ 161 (304)
T 2qgq_A 82 SLNGEFWIRVMYLHPDHLTEEIISAMLELDKVVKYFDVPVQHGSDKILKLMGRTKSSEELKKMLSSIRERFPDAVLRTSI 161 (304)
T ss_dssp TSSSSCEEEECCCCGGGCCHHHHHHHHHCTTBCCEEECCCBCSCHHHHHHTTCCSCHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred hcCCCcEEEEeeeecccCCHHHHHHHHhCCCCccEEEEecccCCHHHHHHhCCCCCHHHHHHHHHHHHhhCCCCEEEEEE
Confidence 54 553 3 2 344568999999999999 89999999999 9999999999999999999999999 688999999
Q ss_pred EEEe-CCCHHHHHHHHHHHhcCCCCCCeeeeeeeeecCCCCCCCCC-CCCHHHHHHH
Q 020848 174 IIGL-GEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQK-PVEIWEMIRM 228 (320)
Q Consensus 174 i~Gl-get~ed~~~~l~~l~~l~~~~~~v~~~~~~p~~gt~~~~~~-~~~~~e~~~~ 228 (320)
|+|+ |||.+++.++++++.+++ ++.+.++.|.|.|||++...+ .++.+...+.
T Consensus 162 IvG~PgEt~ed~~~t~~~l~~l~--~~~v~~~~~~p~pgT~~~~~~~~v~~~~~~~r 216 (304)
T 2qgq_A 162 IVGFPGETEEDFEELKQFVEEIQ--FDKLGAFVYSDEEGTVAFNLKEKVDPEMAKRR 216 (304)
T ss_dssp EECCTTCCHHHHHHHHHHHHHHC--CSEEEEEECCC-----------CCCHHHHHHH
T ss_pred EEeCCCCCHHHHHHHHHHHHHcC--CCEEEEEEeeCCCCChhHhCcCCCCHHHHHHH
Confidence 9999 999999999999999998 889999999999999988765 4565543333
No 5
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=99.90 E-value=2e-22 Score=182.81 Aligned_cols=204 Identities=21% Similarity=0.263 Sum_probs=162.8
Q ss_pred CCCeeEEEEEeecccCCCCCCCCCCCCCCCC---CCCCCCcCCCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhH
Q 020848 16 SMEEVQQCTLLSIKTGGCSEDCSYCPQSSRY---DTGVKGQKLMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNF 92 (320)
Q Consensus 16 ~~~~v~~~~~l~~~t~~C~~~C~fC~~~~~~---~~~~~~~~~~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~ 92 (320)
||..+.. ..++ .|++||++|.||...... .........++.|++.+.++.+.+.|++.|.|+| |||+..
T Consensus 9 ~gr~~~~-l~i~-~T~~CNl~C~yC~~~~~~~~~~~~~~~~~~ls~e~i~~~i~~~~~~g~~~i~~tG------GEPll~ 80 (340)
T 1tv8_A 9 LGRPIRD-LRLS-VTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITG------GEPLMR 80 (340)
T ss_dssp TSCBCCE-EEEE-CCSCCSCCCTTTSCTTTSSTTCCCCCGGGSCCHHHHHHHHHHHHHTTCCEEEEES------SCGGGS
T ss_pred CCCccCe-EEEE-eCCCcCCcCCCCCcCcccCCCcccCCccCCCCHHHHHHHHHHHHHCCCCEEEEeC------CCccch
Confidence 4655543 3445 699999999999775411 0011234559999999999999889999998876 567777
Q ss_pred HHHHHHHHHhhhcCc--eE-EEeCCCCCHHHHHHHHHhccCeeccCcccc-HHHHhhhCCCC-CHHHHHHHHHHHHHcCC
Q 020848 93 NQILEYVKDIRDMGM--EV-CCTLGMLEKHQAIELKKAGLTAYNHNLDTS-REFYSKIITTR-SYDERLETLKHVREAGI 167 (320)
Q Consensus 93 ~~l~~~i~~~k~~~~--~i-~~~~g~l~~e~l~~L~~aGld~v~i~let~-~~~~~~i~~~~-~~~~~l~~i~~a~~~Gi 167 (320)
+++.++++.+++.+. .+ .+|||.+..+.++.|+++|++.|.+|+|+. ++.|+.+++.. ++++++++++.+++.|+
T Consensus 81 ~~l~~li~~~~~~~~~~~i~i~TNG~ll~~~~~~L~~~g~~~v~iSld~~~~~~~~~i~~~~~~~~~v~~~i~~l~~~g~ 160 (340)
T 1tv8_A 81 RDLDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGL 160 (340)
T ss_dssp TTHHHHHHHHTTCTTCCEEEEEECSTTHHHHHHHHHHHTCCEEEEECCCSSHHHHHHHHSSCCCHHHHHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHhCCCCCeEEEEeCccchHHHHHHHHHCCCCEEEEecCCCCHHHHHHhhCCCCCHHHHHHHHHHHHHCCC
Confidence 788999999986643 43 568898777899999999999999999999 89999998877 99999999999999999
Q ss_pred eeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeeeeeeecCCCCC-CCCCCCCHHHHHHHHH
Q 020848 168 NVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPL-QDQKPVEIWEMIRMIA 230 (320)
Q Consensus 168 ~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~~~p~~gt~~-~~~~~~~~~e~~~~~a 230 (320)
.+.+++++..++|.+++.++++++++++ ++ +.+..|+|.++++. ......+.+++++.+.
T Consensus 161 ~v~i~~vv~~g~n~~ei~~~~~~~~~~g--~~-~~~i~~~p~~~~~~~~~~~~~~~~e~~~~l~ 221 (340)
T 1tv8_A 161 NVKVNVVIQKGINDDQIIPMLEYFKDKH--IE-IRFIEFMDVGNDNGWDFSKVVTKDEMLTMIE 221 (340)
T ss_dssp EEEEEEEECTTTTGGGHHHHHHHHHHTT--CC-EEEEECCCBCSSSSBCCSSCCCHHHHHHHHH
T ss_pred CEEEEEEEeCCCCHHHHHHHHHHHHhcC--Ce-EEEEEeeEcCCCccchhhcCCCHHHHHHHHH
Confidence 9999888855789999999999999998 54 78888999987653 3234567777766655
No 6
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=99.88 E-value=2e-22 Score=189.62 Aligned_cols=202 Identities=15% Similarity=0.154 Sum_probs=155.0
Q ss_pred cccCCCCCCCCCCCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHc----CCCEEEEecccCCCCCCchhHHHHHHHHHHhh
Q 020848 28 IKTGGCSEDCSYCPQSSRYDTGVKGQKLMTKDAVMQAAQKAKEA----GSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR 103 (320)
Q Consensus 28 ~~t~~C~~~C~fC~~~~~~~~~~~~~~~~s~eei~~~~~~~~~~----g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k 103 (320)
++.++|+.+|.||.+....... ........+.+.++++.+.+. ++..++|+||+ ++.. ..+.+.++++.++
T Consensus 57 ihIpfC~~~C~yC~~~~~~~~~-~~~~~~~~~~l~~Ei~~~~~~~~~~~i~~i~fgGGt-pt~l---~~~~l~~ll~~i~ 131 (457)
T 1olt_A 57 VHIPFCHKLCYFCGCNKIVTRQ-QHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGGGT-PTYL---NKAQISRLMKLLR 131 (457)
T ss_dssp EEECEESSCCTTCCSSCEECSC-THHHHHHHHHHHHHHHHHGGGGTTCCEEEEEEEESC-GGGS---CHHHHHHHHHHHH
T ss_pred EEcCCCCCCCCCCCCceeccCC-cchHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCCC-cccC---CHHHHHHHHHHHH
Confidence 3445799999999986532111 111112467788888766543 35678887754 3221 2355666666665
Q ss_pred h---c----CceEEEeCCCCCHHHHHHHHHhccCeeccCcccc-HHHHhhhCCCCCHHHHHHHHHHHHHcCCe-eeeeEE
Q 020848 104 D---M----GMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTS-REFYSKIITTRSYDERLETLKHVREAGIN-VCSGGI 174 (320)
Q Consensus 104 ~---~----~~~i~~~~g~l~~e~l~~L~~aGld~v~i~let~-~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~-v~~~~i 174 (320)
+ . .+.+.++++.++++.++.|+++|+++|++++|+. +++++.+++++++++++++++.+++.|+. +++++|
T Consensus 132 ~~~~~~~~~eitie~~p~~l~~e~l~~L~~~G~~rislGvQS~~~~~l~~i~R~~~~~~~~~ai~~~r~~G~~~v~~dlI 211 (457)
T 1olt_A 132 ENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLI 211 (457)
T ss_dssp HHSCEEEEEEEEEEECSSSCCTHHHHHHHHTTCCEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTTCCSCEEEEE
T ss_pred HhCCCCCCcEEEEEEccCcCCHHHHHHHHHcCCCEEEEeeccCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 4 1 2335677788999999999999999999999999 99999999999999999999999999998 999999
Q ss_pred EEe-CCCHHHHHHHHHHHhcCCCCCCeeeeeeeeecCCCCCCC-----CCCCCHHHHHHHHHHHHHhC
Q 020848 175 IGL-GEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQD-----QKPVEIWEMIRMIATARIVM 236 (320)
Q Consensus 175 ~Gl-get~ed~~~~l~~l~~l~~~~~~v~~~~~~p~~gt~~~~-----~~~~~~~e~~~~~a~~R~~~ 236 (320)
+|+ |||.+++.++++++.+++ +++++++.|.|.|+|+... ...++.++..+++..+...+
T Consensus 212 ~GlPget~e~~~~tl~~~~~l~--~~~i~~y~l~~~p~t~~~~~~~~~~~lp~~~~~~~~~~~~~~~L 277 (457)
T 1olt_A 212 YGLPKQTPESFAFTLKRVAELN--PDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFL 277 (457)
T ss_dssp ESCTTCCHHHHHHHHHHHHHHC--CSEEEEEECCCCTTTSGGGGGSCGGGSCCHHHHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHhcC--cCEEEeecCcCCcCchhHhhccccCCCcCHHHHHHHHHHHHHHH
Confidence 999 999999999999999998 8999999999999987643 23467777777776654443
No 7
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=99.84 E-value=7.9e-20 Score=165.87 Aligned_cols=203 Identities=14% Similarity=0.162 Sum_probs=154.8
Q ss_pred cc-CCCCCCCCCCCCCCCCCCC-CCCcCCCCHHHHHHHHHHHHHc--------------------CCCEEEEecccCCCC
Q 020848 29 KT-GGCSEDCSYCPQSSRYDTG-VKGQKLMTKDAVMQAAQKAKEA--------------------GSTRFCMGAAWRDTI 86 (320)
Q Consensus 29 ~t-~~C~~~C~fC~~~~~~~~~-~~~~~~~s~eei~~~~~~~~~~--------------------g~~~i~l~~g~~~~~ 86 (320)
.+ ++||++|.||........+ ......+++++|++.+...... .++.|.|.+|
T Consensus 76 ~~~~gCnl~C~fC~~~~~~~~~~~~~~~~~~~eei~~~i~~~~~~~~~~~~g~~~v~~~~~~e~~~~~~v~~sgg----- 150 (342)
T 2yx0_A 76 PVLAWCTHNCIFCWRPMENFLGTELPQPWDDPAFIVEESIKAQRKLLIGYKGNPKVDKKKFEEAWNPTHAAISLS----- 150 (342)
T ss_dssp SCSSCCSBCCTTCCCSSSSCSCSSCCSSCCCHHHHHHHHHHHHHHHHTTCC--CCSCHHHHHHHTSCCEEEECSS-----
T ss_pred eChhhhhCcCcccCCCCCCCcccccccCcCCHHHHHHHHHHHHHHHhhccCCCcccchhhhhhccCCCEEEEcCC-----
Confidence 45 6999999999875321110 1123457899999887654321 2466888643
Q ss_pred CCchhHHHHHHHHHHhhhcCceE-EEeCCCCCHHHHHHHHHhc--cCeeccCcccc-HHHHhhhCC---CCCHHHHHHHH
Q 020848 87 GRKTNFNQILEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKAG--LTAYNHNLDTS-REFYSKIIT---TRSYDERLETL 159 (320)
Q Consensus 87 ge~~~~~~l~~~i~~~k~~~~~i-~~~~g~l~~e~l~~L~~aG--ld~v~i~let~-~~~~~~i~~---~~~~~~~l~~i 159 (320)
|||+..+++.++++.+++.++.+ ..|||.+ ++.++.|+++| ++.+.+++|+. ++.++.+++ +.+++++++++
T Consensus 151 GEPll~~~l~~ll~~~~~~g~~i~l~TNG~~-~e~l~~L~~~g~~~~~l~isld~~~~e~~~~i~~~~~~~~~~~~~~~i 229 (342)
T 2yx0_A 151 GEPMLYPYMGDLVEEFHKRGFTTFIVTNGTI-PERLEEMIKEDKLPTQLYVSITAPDIETYNSVNIPMIPDGWERILRFL 229 (342)
T ss_dssp SCGGGSTTHHHHHHHHHHTTCEEEEEECSCC-HHHHHHHHHTTCCCSEEEEEECCSSHHHHHHHHCBSSSCHHHHHHHHH
T ss_pred CcccchhhHHHHHHHHHHCCCcEEEEcCCCc-HHHHHHHHhcCCCCCEEEEEccCCCHHHHHHHhCCCcccHHHHHHHHH
Confidence 56766678999999998878875 4578887 88899999988 99999999999 899999886 45799999999
Q ss_pred HHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeeeeeeecCCC--CCCCCCCCCHHHHHHHHHHHHHhCC
Q 020848 160 KHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGT--PLQDQKPVEIWEMIRMIATARIVMP 237 (320)
Q Consensus 160 ~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~~~p~~gt--~~~~~~~~~~~e~~~~~a~~R~~~p 237 (320)
+.+++.|+++.+.+++..|+|.+++.++++++++++ ++.+.+.+|.|.+++ ++.....++.+++.++...++..+|
T Consensus 230 ~~l~~~g~~v~i~~~l~~g~n~~~~~~l~~~l~~~~--~~~i~l~~~~~~~~~~~~l~~~~~~~~e~~~~~~~~l~~~l~ 307 (342)
T 2yx0_A 230 ELMRDLPTRTVVRLTLVKGENMHSPEKYAKLILKAR--PMFVEAKAYMFVGYSRNRLTINNMPSHQDIREFAEALVKHLP 307 (342)
T ss_dssp HHHTTCSSEEEEEEEECTTTTCCCHHHHHHHHHHHC--CSEEEEEECC------CCCCGGGSCCHHHHHHHHHHHHTTCT
T ss_pred HHHHhCCCCEEEEEEEECCccHHHHHHHHHHHHHcC--CCEEEEEeeeecCCCcccccccCCCCHHHHHHHHHHHHHhcc
Confidence 999999999888888855788888999999999997 788998888887643 4434456788898888888887776
Q ss_pred Cc
Q 020848 238 KA 239 (320)
Q Consensus 238 ~~ 239 (320)
..
T Consensus 308 ~~ 309 (342)
T 2yx0_A 308 GY 309 (342)
T ss_dssp TE
T ss_pred CC
Confidence 53
No 8
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=99.84 E-value=7.6e-20 Score=157.76 Aligned_cols=194 Identities=15% Similarity=0.194 Sum_probs=149.8
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHc---CCCEEEEecccCCCCCCchhHHH-HHHHHHHhhh
Q 020848 29 KTGGCSEDCSYCPQSSRYDTGVKGQKLMTKDAVMQAAQKAKEA---GSTRFCMGAAWRDTIGRKTNFNQ-ILEYVKDIRD 104 (320)
Q Consensus 29 ~t~~C~~~C~fC~~~~~~~~~~~~~~~~s~eei~~~~~~~~~~---g~~~i~l~~g~~~~~ge~~~~~~-l~~~i~~~k~ 104 (320)
.|++||++|.||..+.... ......++++++++.++..... ++..|.|+| |||+..++ +.++++.+++
T Consensus 25 ~t~~Cn~~C~~C~~~~~~~--~~~~~~~~~~~i~~~i~~~~~~~~~~~~~i~~~G------GEP~l~~~~l~~l~~~~~~ 96 (245)
T 3c8f_A 25 FFQGCLMRCLYCHNRDTWD--THGGKEVTVEDLMKEVVTYRHFMNASGGGVTASG------GEAILQAEFVRDWFRACKK 96 (245)
T ss_dssp EESCCSCCCTTCSCGGGCC--TTCSEEECHHHHHHHHGGGHHHHTSTTCEEEEEE------SCGGGGHHHHHHHHHHHHT
T ss_pred EeCCCCCCCCCCCCchhcc--cccCccCCHHHHHHHHHHhhhhhcCCCCeEEEEC------CCcCCCHHHHHHHHHHHHH
Confidence 5789999999998753211 1123347899999999876653 467888876 45766666 6899999997
Q ss_pred cCceE-EEeCCCC--CHHHHHHHHHhccCeeccCcccc-HHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEe--C
Q 020848 105 MGMEV-CCTLGML--EKHQAIELKKAGLTAYNHNLDTS-REFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL--G 178 (320)
Q Consensus 105 ~~~~i-~~~~g~l--~~e~l~~L~~aGld~v~i~let~-~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl--g 178 (320)
.++.+ ..|||.+ +.+.+++|.++ ++.+.+++|+. ++.++.+++ .++++++++++.+++.|+++.+.+++.. +
T Consensus 97 ~~~~i~i~Tng~~~~~~~~~~~l~~~-~~~v~isld~~~~~~~~~~~~-~~~~~~~~~i~~l~~~g~~v~i~~~~~~g~~ 174 (245)
T 3c8f_A 97 EGIHTCLDTNGFVRRYDPVIDELLEV-TDLVMLDLKQMNDEIHQNLVG-VSNHRTLEFAKYLANKNVKVWIRYVVVPGWS 174 (245)
T ss_dssp TTCCEEEEECCCCCCCCHHHHHHHHT-CSEEEEECCCSSHHHHHHHHS-SCSHHHHHHHHHHHHHTCCEEEEEEECTTTT
T ss_pred cCCcEEEEeCCCcCcCHHHHHHHHHh-CCEEEEeCCCCCHHHhhhccC-CCHHHHHHHHHHHHhcCCEEEEEEeecCCCC
Confidence 78774 4578887 88999999998 99999999999 899999875 4579999999999999998777766533 4
Q ss_pred CCHHHHHHHHHHHhcCCCCCCeeeeeeeeecCCC---------CCCCCCCCCHHHHHHHHHHHH
Q 020848 179 EAEEDRVGLLHTLATLPTHPESVPINALLAVKGT---------PLQDQKPVEIWEMIRMIATAR 233 (320)
Q Consensus 179 et~ed~~~~l~~l~~l~~~~~~v~~~~~~p~~gt---------~~~~~~~~~~~e~~~~~a~~R 233 (320)
++.+++.++++++.+++. ...+.+.+|.|.+++ ++.+.++++.+++.++...++
T Consensus 175 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (245)
T 3c8f_A 175 DDDDSAHRLGEFTRDMGN-VEKIELLPYHELGKHKWVAMGEEYKLDGVKPPKKETMERVKGILE 237 (245)
T ss_dssp CCHHHHHHHHHHHHHHCC-EEEEEEEECCCCSHHHHHHTTCCCTTTTCCCCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCC-CceeEEEeccccChhHHHhhCcccccccCCCCCHHHHHHHHHHHH
Confidence 678999999999999972 267888888886643 334456778888777777665
No 9
>2z2u_A UPF0026 protein MJ0257; metal binding protein; 2.40A {Methanocaldococcus jannaschii}
Probab=99.79 E-value=4.3e-19 Score=158.92 Aligned_cols=198 Identities=16% Similarity=0.252 Sum_probs=130.8
Q ss_pred EEEeeccc-CCCCCCCCCCCCCCCCCCC-----CCCcCCCCHHHHHHHHHHHHH------c---------------CCCE
Q 020848 23 CTLLSIKT-GGCSEDCSYCPQSSRYDTG-----VKGQKLMTKDAVMQAAQKAKE------A---------------GSTR 75 (320)
Q Consensus 23 ~~~l~~~t-~~C~~~C~fC~~~~~~~~~-----~~~~~~~s~eei~~~~~~~~~------~---------------g~~~ 75 (320)
+..+. .| .+||++|.||........+ ......++++++++.+..... . ..+.
T Consensus 52 ~l~i~-~t~~~Cn~~C~fC~~~~~~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~~~~~~~g~~~v~~~~r~~~~~~~~~ 130 (311)
T 2z2u_A 52 CIQCT-PSVIWCQQNCIFCWRVLPRDIGIDISQIKEPKWEEPEVVYEKILAMHKRIIMGYAGVLDRVGEKKFKEALEPKH 130 (311)
T ss_dssp EEEEE-SCSSCCSCC----------------CCSCCCCCCCHHHHHHHHHHHHHHHHHGGGGGHHHHCHHHHHHHTSCCE
T ss_pred eEEec-cChhHHhCcCcccCCCCCCcccccccccCccccCCHHHHHHHHHHHHHHHhhccCCCcCcchhhhhhhccCCCE
Confidence 34555 56 7999999999854211101 112345899999887654421 1 2456
Q ss_pred EEEecccCCCCCCchhHHHHHHHHHHhhhcCceE-EEeCCCCCHHHHHHHHHhccCeeccCcccc-HHHHhhhCCC--CC
Q 020848 76 FCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKAGLTAYNHNLDTS-REFYSKIITT--RS 151 (320)
Q Consensus 76 i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i-~~~~g~l~~e~l~~L~~aGld~v~i~let~-~~~~~~i~~~--~~ 151 (320)
+.|.+| |||+.++++.++++.+++.|+.+ ..|||.+ ++.++.| |++.+.+++|+. ++.|+.+++. .+
T Consensus 131 i~~s~g-----GEPll~~~l~~li~~~~~~g~~~~l~TNG~~-~~~l~~L---~~~~v~isld~~~~~~~~~i~~~~~~~ 201 (311)
T 2z2u_A 131 VAISLS-----GEPTLYPYLDELIKIFHKNGFTTFVVSNGIL-TDVIEKI---EPTQLYISLDAYDLDSYRRICGGKKEY 201 (311)
T ss_dssp EEECSS-----SCGGGSTTHHHHHHHHHHTTCEEEEEECSCC-HHHHHHC---CCSEEEEECCCSSTTTC----CCCHHH
T ss_pred EEEeCC-----cCccchhhHHHHHHHHHHCCCcEEEECCCCC-HHHHHhC---CCCEEEEEeecCCHHHHHHHhCCccch
Confidence 777632 57877788999999999878874 4678877 5555555 899999999999 8999998876 57
Q ss_pred HHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeeeeeeecCCCCC--CCCCCCCHHHHHHHH
Q 020848 152 YDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPL--QDQKPVEIWEMIRMI 229 (320)
Q Consensus 152 ~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~~~p~~gt~~--~~~~~~~~~e~~~~~ 229 (320)
+++++++++.+++.| .+.+.+++..|.++ ++.++++++.+++ ++.+.+.+|+|.++++. .....++.+++.+..
T Consensus 202 ~~~v~~~i~~l~~~g-~v~i~~~~~~g~n~-~~~~~~~~~~~~~--~~~i~l~~~~p~g~~~~~~~~~~~~~~~e~~~~~ 277 (311)
T 2z2u_A 202 WESILNTLDILKEKK-RTCIRTTLIRGYND-DILKFVELYERAD--VHFIELKSYMHVGYSQKRLKKEDMLQHDEILKLA 277 (311)
T ss_dssp HHHHHHHHHHHTTSS-SEEEEEEECTTTTC-CGGGTHHHHHHHT--CSEEEEEECC------------CCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhcC-CEEEEEEEECCcch-hHHHHHHHHHHcC--CCEEEEEeeEEccccccccccccCCCHHHHHHHH
Confidence 999999999999999 87777766456676 8889999999987 78999999999987763 223567888888877
Q ss_pred HHHHH
Q 020848 230 ATARI 234 (320)
Q Consensus 230 a~~R~ 234 (320)
..++.
T Consensus 278 ~~l~~ 282 (311)
T 2z2u_A 278 KMLDE 282 (311)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 76653
No 10
>3rfa_A Ribosomal RNA large subunit methyltransferase N; radical SAM, S-adenosylmethionine, iron sulfur cluster, oxidoreductase; HET: SAM; 2.05A {Escherichia coli} PDB: 3rf9_A*
Probab=99.72 E-value=2e-16 Score=144.55 Aligned_cols=198 Identities=16% Similarity=0.217 Sum_probs=147.1
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCCcCCCCHHHHHHHHHHHHH----------cCCCEEEEecccCCCCCCchh-HHHHHH
Q 020848 29 KTGGCSEDCSYCPQSSRYDTGVKGQKLMTKDAVMQAAQKAKE----------AGSTRFCMGAAWRDTIGRKTN-FNQILE 97 (320)
Q Consensus 29 ~t~~C~~~C~fC~~~~~~~~~~~~~~~~s~eei~~~~~~~~~----------~g~~~i~l~~g~~~~~ge~~~-~~~l~~ 97 (320)
.+.+||++|.||..... + ..+.++++||++.+..+.. .+++.|.|.|+ |||+. ++.+.+
T Consensus 121 sq~GCnl~C~fC~tg~~---g--~~r~Lt~eEIv~qv~~~~~~~~~~g~~gg~~i~~Ivf~Gg-----GEPLln~d~v~~ 190 (404)
T 3rfa_A 121 SQVGCALECKFCSTAQQ---G--FNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGM-----GEPLLNLNNVVP 190 (404)
T ss_dssp CEEECSSCCTTCGGGTT---C--EEEECCHHHHHHHHHHHHHHHCCHHHHSSCSCSEEEECSS-----SCGGGCHHHHHH
T ss_pred eCCCCCCcCCCCCCCCC---C--CCCcCCHHHHHHHHHHHHHHhhhcccccCCCccEEEEeCC-----CCcccCHHHHHH
Confidence 56899999999976531 2 1234899999998876543 24778988764 57754 578999
Q ss_pred HHHHhhh-cCc-----eE-EEeCCCCCHHHHHHHHHhccCeeccCcccc-HHHHhhhCC---CCCHHHHHHHHHH-HHHc
Q 020848 98 YVKDIRD-MGM-----EV-CCTLGMLEKHQAIELKKAGLTAYNHNLDTS-REFYSKIIT---TRSYDERLETLKH-VREA 165 (320)
Q Consensus 98 ~i~~~k~-~~~-----~i-~~~~g~l~~e~l~~L~~aGld~v~i~let~-~~~~~~i~~---~~~~~~~l~~i~~-a~~~ 165 (320)
+++.+++ .|+ .+ ..|+|.+ +.+++|.+.+...+.+++++. ++.|+.+.+ +.++++++++++. +.+.
T Consensus 191 ~i~~lk~~~Gl~~s~r~itlsTnG~~--p~i~~L~~~~d~~LaiSLka~d~e~~~~i~pv~~~~~le~vl~ai~~~~~~~ 268 (404)
T 3rfa_A 191 AMEIMLDDFGFGLSKRRVTLSTSGVV--PALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKS 268 (404)
T ss_dssp HHHHHHSTTTTCCCGGGEEEEESCCH--HHHHHHHHHCCCEEEEECCCSSHHHHHHHSGGGGTSCHHHHHHHHHHHHHHC
T ss_pred HHHHHHhhcCcCcCCCceEEECCCcH--HHHHHHHHhhcceEEecccCCCHHHHHHhcCCccCCCHHHHHHHHHHHHHHh
Confidence 9999996 466 54 4578976 468888888655678999999 899999875 4589999999955 5566
Q ss_pred CC---eeeeeE--EEEeCCCHHHHHHHHHHHhcCCCCCCeeeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCce
Q 020848 166 GI---NVCSGG--IIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAM 240 (320)
Q Consensus 166 Gi---~v~~~~--i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~ 240 (320)
|. ++.+.. +-|.+++++++.+++++++.++ ..|.+.+|.|++++++ ++++.+++.+....++...-...
T Consensus 269 g~~~~~V~ie~vLI~GvNDs~e~~~~La~ll~~l~---~~VnLIpynP~~~~~~---~~ps~e~i~~f~~iL~~~Gi~vt 342 (404)
T 3rfa_A 269 NANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP---CKINLIPWNPFPGAPY---GRSSNSRIDRFSKVLMSYGFTTI 342 (404)
T ss_dssp TTTTTCEEEEEEEBTTTTCSHHHHHHHHHHTTTSC---EEEEEEECCCCTTCCC---CBCCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCcccEEEEEEEecCCCCCHHHHHHHHHHHHcCC---CcEEEEeccCCCCCCC---CCCCHHHHHHHHHHHHHcCCcEE
Confidence 76 655544 4456788999999999999886 3788899999887654 56778887777777765444444
Q ss_pred eecC
Q 020848 241 VRLS 244 (320)
Q Consensus 241 i~~~ 244 (320)
++.+
T Consensus 343 iR~~ 346 (404)
T 3rfa_A 343 VRKT 346 (404)
T ss_dssp ECCC
T ss_pred EcCC
Confidence 4443
No 11
>2a5h_A L-lysine 2,3-aminomutase; radical SAM, four-iron-four-sulfur cluster, 4Fe4S, FS4, SAM, adenosylmethionine, alpha-beta channel; HET: SAM LYS PLP; 2.10A {Clostridium subterminale}
Probab=99.62 E-value=5.6e-15 Score=136.88 Aligned_cols=185 Identities=16% Similarity=0.174 Sum_probs=131.0
Q ss_pred EeecccCCCCCCCCCCCCCCCCCCCCCCcCCCCHHHHHHHHHHHHH-cCCCEEEEecccCCCCCCchhHHH--HHHHHHH
Q 020848 25 LLSIKTGGCSEDCSYCPQSSRYDTGVKGQKLMTKDAVMQAAQKAKE-AGSTRFCMGAAWRDTIGRKTNFNQ--ILEYVKD 101 (320)
Q Consensus 25 ~l~~~t~~C~~~C~fC~~~~~~~~~~~~~~~~s~eei~~~~~~~~~-~g~~~i~l~~g~~~~~ge~~~~~~--l~~~i~~ 101 (320)
.+. .|++||++|.||...... + .....++.+++.+.++.+.+ .|++.|.|+|| ||+.+++ +.++++.
T Consensus 118 ~l~-vT~~Cnl~C~yC~~~~~~--~-~~~~~ls~eei~~~i~~i~~~~gi~~V~ltGG------EPll~~d~~L~~il~~ 187 (416)
T 2a5h_A 118 LLL-ITDMCSMYCRHCTRRRFA--G-QSDDSMPMERIDKAIDYIRNTPQVRDVLLSGG------DALLVSDETLEYIIAK 187 (416)
T ss_dssp EEE-EESCCSSCCTTCTTTTTT--T-SSSSBCCHHHHHHHHHHHHTCTTCCEEEEEES------CTTSSCHHHHHHHHHH
T ss_pred EEe-cCCCccccCcCCCCcccC--C-CccCCCCHHHHHHHHHHHHhcCCCcEEEEECC------CCCCCCHHHHHHHHHH
Confidence 344 589999999999765321 1 12234899999999998887 68999988874 4555444 7888888
Q ss_pred hhhc-Cce-E-EEeCC------CCCHHHHHHHHHhccCeeccCcccc-HHHHhhhCCCCCHHHHHHHHHHHHHcCCeeee
Q 020848 102 IRDM-GME-V-CCTLG------MLEKHQAIELKKAGLTAYNHNLDTS-REFYSKIITTRSYDERLETLKHVREAGINVCS 171 (320)
Q Consensus 102 ~k~~-~~~-i-~~~~g------~l~~e~l~~L~~aGld~v~i~let~-~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~ 171 (320)
+++. ++. + ..|+| .++++.++.|+++ +.+.+++++. + +.+. ++++++++.++++|+.+.+
T Consensus 188 l~~~~~v~~i~i~Tng~~~~p~~it~e~l~~L~~~--~~v~Isl~~~~~---~ei~-----~~v~~ai~~L~~aGi~v~i 257 (416)
T 2a5h_A 188 LREIPHVEIVRIGSRTPVVLPQRITPELVNMLKKY--HPVWLNTHFNHP---NEIT-----EESTRACQLLADAGVPLGN 257 (416)
T ss_dssp HHTSTTCCEEEEECSHHHHCGGGCCHHHHHHHGGG--CSEEEEECCCSG---GGCC-----HHHHHHHHHHHHTTCCEEE
T ss_pred HHhcCCccEEEEEecccccccccCCHHHHHHHHhc--CcEEEEEecCCH---HHHh-----HHHHHHHHHHHHcCCEEEE
Confidence 8765 443 3 35566 3689999999998 7888988886 5 2332 8899999999999998777
Q ss_pred eEEE--EeCCCHHHHHHHHHHHhcCCCCCCeeeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHH
Q 020848 172 GGII--GLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARI 234 (320)
Q Consensus 172 ~~i~--Glget~ed~~~~l~~l~~l~~~~~~v~~~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~ 234 (320)
..++ |.+++.+++.++++++.+++ +....++.+.+.+|+++.. .+..+...++..++.
T Consensus 258 ~~vll~GvNd~~e~l~~l~~~l~~lg--v~~~~i~~~~~~~g~~~~~---~~~~~~~eil~~l~~ 317 (416)
T 2a5h_A 258 QSVLLRGVNDCVHVMKELVNKLVKIR--VRPYYIYQCDLSLGLEHFR---TPVSKGIEIIEGLRG 317 (416)
T ss_dssp EEECCTTTTCSHHHHHHHHHHHHHTT--EEEEEEECCCCBTTCGGGC---CCHHHHHHHHHTTBT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHcC--CceEEEeecCCCCCccccc---CCcccHHHHHHHHHH
Confidence 6665 56788888999999999998 4433333333346776433 345555555554443
No 12
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.47 E-value=9.3e-13 Score=108.31 Aligned_cols=146 Identities=13% Similarity=0.016 Sum_probs=112.4
Q ss_pred CCCchhHHHH-HHHHHHhhhcCceE-EEeCCCCCHHHHHHHHHhccCeeccCcccc-HHHHhhhCCCCCHHHHHHHHHHH
Q 020848 86 IGRKTNFNQI-LEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKAGLTAYNHNLDTS-REFYSKIITTRSYDERLETLKHV 162 (320)
Q Consensus 86 ~ge~~~~~~l-~~~i~~~k~~~~~i-~~~~g~l~~e~l~~L~~aGld~v~i~let~-~~~~~~i~~~~~~~~~l~~i~~a 162 (320)
+|||+.++++ .++++.+++.|+.+ ..|||.++++.++.|.+. +|.+.+++++. ++.|+.+++ .++++++++++.+
T Consensus 11 GGEPll~~~~~~~l~~~~~~~g~~~~l~TNG~l~~~~~~~l~~~-~d~v~isld~~~~~~~~~~~g-~~~~~i~~~i~~l 88 (182)
T 3can_A 11 GGEPLLHPEFLIDILKRCGQQGIHRAVDTTLLARKETVDEVMRN-CELLLIDLKSMDSTVHQTFCD-VPNELILKNIRRV 88 (182)
T ss_dssp SSTGGGSHHHHHHHHHHHHHTTCCEEEECTTCCCHHHHHHHHHT-CSEEEEECCCSCHHHHHHHHS-SCSHHHHHHHHHH
T ss_pred cccccCCHHHHHHHHHHHHHCCCcEEEECCCCCCHHHHHHHHhh-CCEEEEECCCCCHHHHHHHhC-CCHHHHHHHHHHH
Confidence 3688888887 59999999878774 567999999999999988 99999999999 899998874 4579999999999
Q ss_pred HHcCCeeeeeEEEEe--CCCHHHHHHHHHHHhcC-CCCC-CeeeeeeeeecCCCCC---------CCCCCCCHHH--HHH
Q 020848 163 REAGINVCSGGIIGL--GEAEEDRVGLLHTLATL-PTHP-ESVPINALLAVKGTPL---------QDQKPVEIWE--MIR 227 (320)
Q Consensus 163 ~~~Gi~v~~~~i~Gl--get~ed~~~~l~~l~~l-~~~~-~~v~~~~~~p~~gt~~---------~~~~~~~~~e--~~~ 227 (320)
.+.|+.+.+.+++-. +++.+++.++++++.++ + + ..+.+.+|.|.+...+ .+.++++.++ +.+
T Consensus 89 ~~~g~~v~i~~~v~~~~n~n~~~~~~~~~~~~~~~g--~~~~~~l~~~~p~g~~~~~~l~~~y~~~~~~~~~~e~~~l~~ 166 (182)
T 3can_A 89 AEADFPYYIRIPLIEGVNADEKNIKLSAEFLASLPR--HPEIINLLPYHDIGKGKHAKLGSIYNPKGYKMQTPSEEVQQQ 166 (182)
T ss_dssp HHTTCCEEEEEEECBTTTCSHHHHHHHHHHHHHSSS--CCSEEEEEECCC------------------CCBCCCHHHHHH
T ss_pred HhCCCeEEEEEEEECCCCCCHHHHHHHHHHHHhCcC--ccceEEEecCcccCHHHHHHhCCcCcccCCCCCCHHHHHHHH
Confidence 999988777666533 47889999999999999 7 6 7899999999875432 2344555555 667
Q ss_pred HHHHHHHh
Q 020848 228 MIATARIV 235 (320)
Q Consensus 228 ~~a~~R~~ 235 (320)
....++..
T Consensus 167 ~~~~~~~~ 174 (182)
T 3can_A 167 CIQILTDY 174 (182)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHc
Confidence 66666654
No 13
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=98.65 E-value=3.8e-06 Score=74.09 Aligned_cols=223 Identities=13% Similarity=0.045 Sum_probs=148.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhc-CceEEEeCCCCCHHHHHHHHHhccCeecc
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM-GMEVCCTLGMLEKHQAIELKKAGLTAYNH 134 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~-~~~i~~~~g~l~~e~l~~L~~aGld~v~i 134 (320)
++.|+.++.++.+.+.|++.|-++++..+ ...|.. .+..+.++.+++. +..+..-. ...+.++...++|++.+.+
T Consensus 24 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~-~~~p~~-~d~~~~~~~~~~~~~~~~~~l~--~~~~~i~~a~~ag~~~v~i 99 (298)
T 2cw6_A 24 VSTPVKIKLIDMLSEAGLSVIETTSFVSP-KWVPQM-GDHTEVLKGIQKFPGINYPVLT--PNLKGFEAAVAAGAKEVVI 99 (298)
T ss_dssp CCHHHHHHHHHHHHHTTCSEECCEECCCT-TTCGGG-TTHHHHHHHSCCCTTCBCCEEC--CSHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHHHHcCcCEEEECCCcCc-cccccc-CCHHHHHHHHhhCCCCEEEEEc--CCHHhHHHHHHCCCCEEEE
Confidence 89999999999999999999988764332 112322 3445566666543 44432211 3588899999999999999
Q ss_pred CccccH-HHHhhhCCC--CCHHHHHHHHHHHHHcCCeeeeeEEEEe------CCCHHHHHHHHHHHhcCCCCCCeeeeee
Q 020848 135 NLDTSR-EFYSKIITT--RSYDERLETLKHVREAGINVCSGGIIGL------GEAEEDRVGLLHTLATLPTHPESVPINA 205 (320)
Q Consensus 135 ~let~~-~~~~~i~~~--~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl------get~ed~~~~l~~l~~l~~~~~~v~~~~ 205 (320)
...+.+ .....+++. ..++...+.++.+++.|+++..++++.+ ..+.+.+.+.++.+.++| ++.+.+.
T Consensus 100 ~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~G--a~~i~l~- 176 (298)
T 2cw6_A 100 FGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMG--CYEISLG- 176 (298)
T ss_dssp EEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTT--CSEEEEE-
T ss_pred EecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcC--CCEEEec-
Confidence 776663 344455443 3577888889999999999887776432 137889999999999998 6666553
Q ss_pred eeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCC-cccccChhHHHHHHHcCCceEee---C--C-ccc--cCC
Q 020848 206 LLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSA-GRVRFSMPEQALCFLAGANSIFT---G--E-KLL--TTP 276 (320)
Q Consensus 206 ~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~-g~~~~~~~~~~~~~~~Gan~~~~---~--~-~~~--~~~ 276 (320)
+|- ...++.++.+++...+..+|+..+.+-. ...++.-.....++.+|+..+-. | + .|. .++
T Consensus 177 -----DT~----G~~~P~~~~~lv~~l~~~~~~~~i~~H~Hn~~Gla~An~laA~~aGa~~vd~tv~GlG~cp~a~g~aG 247 (298)
T 2cw6_A 177 -----DTI----GVGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVAGLGGCPYAQGASG 247 (298)
T ss_dssp -----ETT----SCCCHHHHHHHHHHHHHHSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBTTSCCCCTTSCSSCC
T ss_pred -----CCC----CCcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCCEEEeecccccCCCCCCCCcC
Confidence 221 2367888888888888777753332210 00111112235788999987722 2 1 122 244
Q ss_pred CCChhHHHHHHHHcCCCc
Q 020848 277 NNDFDADQLMFKVLGLTP 294 (320)
Q Consensus 277 ~~~~~~~~~~i~~~G~~p 294 (320)
....++++.+++..|+.+
T Consensus 248 N~~~E~lv~~l~~~g~~~ 265 (298)
T 2cw6_A 248 NLATEDLVYMLEGLGIHT 265 (298)
T ss_dssp BCBHHHHHHHHHHHTCBC
T ss_pred ChhHHHHHHHHHhcCCCC
Confidence 567889999999988864
No 14
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=98.57 E-value=9e-06 Score=71.57 Aligned_cols=222 Identities=11% Similarity=0.050 Sum_probs=144.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhc-CceEEEeCCCCCHHHHHHHHHhccCeecc
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM-GMEVCCTLGMLEKHQAIELKKAGLTAYNH 134 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~-~~~i~~~~g~l~~e~l~~L~~aGld~v~i 134 (320)
++.|+.++.++.+.+.|++.|-+++...+.. -| .+.+..+.++.+++. ++++..-. .+.+.+++..++|++.|.+
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~-~p-~~~~~~e~~~~i~~~~~~~v~~l~--~n~~~i~~a~~~G~~~V~i 98 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATSFVSPKW-VP-QLADSREVMAGIRRADGVRYSVLV--PNMKGYEAAAAAHADEIAV 98 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEECSCTTT-CG-GGTTHHHHHHHSCCCSSSEEEEEC--SSHHHHHHHHHTTCSEEEE
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEccCcCccc-cc-cccCHHHHHHHHHhCCCCEEEEEe--CCHHHHHHHHHCCCCEEEE
Confidence 8999999999999999999998865322111 02 123566777777644 56653322 4688999999999999988
Q ss_pred CccccHH-HHhhhCCC--CCHHHHHHHHHHHHHcCCeeeeeEE--EEe----CCCHHHHHHHHHHHhcCCCCCCeeeeee
Q 020848 135 NLDTSRE-FYSKIITT--RSYDERLETLKHVREAGINVCSGGI--IGL----GEAEEDRVGLLHTLATLPTHPESVPINA 205 (320)
Q Consensus 135 ~let~~~-~~~~i~~~--~~~~~~l~~i~~a~~~Gi~v~~~~i--~Gl----get~ed~~~~l~~l~~l~~~~~~v~~~~ 205 (320)
.+.+.+. ....+++. .+++...+.++.+++.|+.+...+. +|. .-+++++.+.++.+.+.| ++.+.+.-
T Consensus 99 ~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G--~d~i~l~D 176 (295)
T 1ydn_A 99 FISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLG--CHEVSLGD 176 (295)
T ss_dssp EEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHT--CSEEEEEE
T ss_pred EEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcC--CCEEEecC
Confidence 7655532 22222222 2456666778999999999874443 443 247888999999999998 67766651
Q ss_pred eeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecC--CcccccChhHHHHHHHcCCceEee---C---Cccc--cC
Q 020848 206 LLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLS--AGRVRFSMPEQALCFLAGANSIFT---G---EKLL--TT 275 (320)
Q Consensus 206 ~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~--~g~~~~~~~~~~~~~~~Gan~~~~---~---~~~~--~~ 275 (320)
.-| ..++.+..+++...+...|...+.+- .. .++.......++.+|++.+-. | ..|. .+
T Consensus 177 ---t~G-------~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~-~Gla~an~l~Ai~aG~~~vd~sv~GlG~cp~a~g~~ 245 (295)
T 1ydn_A 177 ---TIG-------RGTPDTVAAMLDAVLAIAPAHSLAGHYHDT-GGRALDNIRVSLEKGLRVFDASVGGLGGCPFAPGAK 245 (295)
T ss_dssp ---TTS-------CCCHHHHHHHHHHHHTTSCGGGEEEEEBCT-TSCHHHHHHHHHHHTCCEEEEBTTCCSCBTTBTTSC
T ss_pred ---CCC-------CcCHHHHHHHHHHHHHhCCCCeEEEEECCC-cchHHHHHHHHHHhCCCEEEeccccCCCCCCCCCCc
Confidence 112 25688888888877766664222211 11 122222346788999998732 2 2232 24
Q ss_pred CCCChhHHHHHHHHcCCCc
Q 020848 276 PNNDFDADQLMFKVLGLTP 294 (320)
Q Consensus 276 ~~~~~~~~~~~i~~~G~~p 294 (320)
+....++++.+++..|+.+
T Consensus 246 GN~~~e~lv~~l~~~g~~~ 264 (295)
T 1ydn_A 246 GNVDTVAVVEMLHEMGFET 264 (295)
T ss_dssp CBCBHHHHHHHHHHTTCBC
T ss_pred CChhHHHHHHHHHhcCCCC
Confidence 5567899999999988765
No 15
>4fhd_A Spore photoproduct lyase; partial TIM-barrel, DNA repair, damaged DNA; HET: EEM 0TT; 2.00A {Geobacillus thermodenitrificans} PDB: 4fhc_A* 4fhg_A* 4fhe_A* 4fhf_A*
Probab=98.54 E-value=5.2e-08 Score=87.57 Aligned_cols=163 Identities=17% Similarity=0.205 Sum_probs=94.6
Q ss_pred EEEeecccCCCCCCCCCCCCCCCCCCCCCCcCCCCHHHHHHHHHH-HHHcCCC--EEEEecccCCCCCCchhHHH----H
Q 020848 23 CTLLSIKTGGCSEDCSYCPQSSRYDTGVKGQKLMTKDAVMQAAQK-AKEAGST--RFCMGAAWRDTIGRKTNFNQ----I 95 (320)
Q Consensus 23 ~~~l~~~t~~C~~~C~fC~~~~~~~~~~~~~~~~s~eei~~~~~~-~~~~g~~--~i~l~~g~~~~~ge~~~~~~----l 95 (320)
...++ ...||.+.|.||...........-....+.+++++.++. +.+.+-. .|.+++. . +|...+. .
T Consensus 108 ~Y~ln-~y~GC~~~C~YCYl~~~~~~~~~I~v~vN~~eiL~~l~~~l~~~~~~~~~i~~g~~-T----Dpyp~E~~~~lt 181 (368)
T 4fhd_A 108 EYAIP-LATGCMGHCHYCYLQTTLGSKPYIRVYVNLDDIFAQAQKYINERAPEITRFEAACT-S----DIVGIDHLTHSL 181 (368)
T ss_dssp EEECC-SEEBCSCCCTTCTHHHHTTTCCSEEEECCHHHHHHHHHHHHHHHTTSCEEEESCSS-B----CHHHHHTTTCHH
T ss_pred ceeeC-CccCCCCCCceEeccccCCCCCeEEEecCHHHHHHHHHHHHhhcCCCceEEEEEcC-C----CcchhhHHHhHH
Confidence 34577 588999999999654332211111123678999998765 3333433 3433322 2 2333333 3
Q ss_pred HHHHHHhhhc-CceEEE-eCCCCCHHHHHHHHHhccCeeccCccccHHHHhhhCCC-CCHHHHHHHHHHHHHcCCeeeee
Q 020848 96 LEYVKDIRDM-GMEVCC-TLGMLEKHQAIELKKAGLTAYNHNLDTSREFYSKIITT-RSYDERLETLKHVREAGINVCSG 172 (320)
Q Consensus 96 ~~~i~~~k~~-~~~i~~-~~g~l~~e~l~~L~~aGld~v~i~let~~~~~~~i~~~-~~~~~~l~~i~~a~~~Gi~v~~~ 172 (320)
.++++.+.+. +..+.+ |-+.+- +.+..|...|.-.|.+++.+ +++.+.+-++ .+.++++++++.+.++|+++++.
T Consensus 182 r~~le~l~~~~~~~v~i~TKs~li-d~L~~l~~~~~v~V~~Sitt-~~l~r~~EP~aps~~~RL~Ai~~l~~aGipv~v~ 259 (368)
T 4fhd_A 182 KKAIEFIGATDYGRLRFVTKYEHV-DHLLDARHNGKTRFRFSINS-RYVINHFEPGTSSFDGRLAAARKVAGAGYKLGFV 259 (368)
T ss_dssp HHHHHHHHHCSSEEEEEEESCCCC-GGGTTCCCTTCEEEEEEECC-HHHHHHHCTTSCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHhCCCceEEEEeCCcCH-HHHHhcCcCCceEEEEEEcC-HHHHHHcCCCCCCHHHHHHHHHHHHHCCCeEEEE
Confidence 3444445443 333322 222221 23444444455566667655 5666777664 58999999999999999998877
Q ss_pred EEEEe-CCCH-HHHHHHHHHHhc
Q 020848 173 GIIGL-GEAE-EDRVGLLHTLAT 193 (320)
Q Consensus 173 ~i~Gl-get~-ed~~~~l~~l~~ 193 (320)
+---+ ++++ ++..++++.+.+
T Consensus 260 iaPIiP~~~~~e~y~~lle~l~~ 282 (368)
T 4fhd_A 260 VAPIYRHEGWERGYFELFQELAR 282 (368)
T ss_dssp EEEECCCTTHHHHHHHHHHHHHH
T ss_pred EeCcCCCCCCHHHHHHHHHHHHH
Confidence 64434 5555 577777776554
No 16
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=98.35 E-value=0.00011 Score=64.73 Aligned_cols=225 Identities=12% Similarity=0.040 Sum_probs=144.0
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhh-cCceEEEeCCCCCHHHHHHHHHhccCee
Q 020848 54 KLMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAGLTAY 132 (320)
Q Consensus 54 ~~~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~-~~~~i~~~~g~l~~e~l~~L~~aGld~v 132 (320)
..++.|+.++.++.+.+.|++.|-.+++..+. ..|. +.+..+.++.+.+ .+.++..-. .+.+.+++..++|++.|
T Consensus 25 ~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~-~~~~-~~d~~~~~~~~~~~~~~~~~~l~--~~~~~i~~a~~aG~~~v 100 (302)
T 2ftp_A 25 QPIEVADKIRLVDDLSAAGLDYIEVGSFVSPK-WVPQ-MAGSAEVFAGIRQRPGVTYAALA--PNLKGFEAALESGVKEV 100 (302)
T ss_dssp SCCCHHHHHHHHHHHHHTTCSEEEEEECSCTT-TCGG-GTTHHHHHHHSCCCTTSEEEEEC--CSHHHHHHHHHTTCCEE
T ss_pred CCCCHHHHHHHHHHHHHcCcCEEEECCCcCcc-cccc-ccCHHHHHHHhhhcCCCEEEEEe--CCHHHHHHHHhCCcCEE
Confidence 34899999999999999999999887643221 1122 2344455555553 355543332 37889999999999999
Q ss_pred ccCccccH-HHHhhhCCC--CCHHHHHHHHHHHHHcCCeeeeeEEEEeC------CCHHHHHHHHHHHhcCCCCCCeeee
Q 020848 133 NHNLDTSR-EFYSKIITT--RSYDERLETLKHVREAGINVCSGGIIGLG------EAEEDRVGLLHTLATLPTHPESVPI 203 (320)
Q Consensus 133 ~i~let~~-~~~~~i~~~--~~~~~~l~~i~~a~~~Gi~v~~~~i~Glg------et~ed~~~~l~~l~~l~~~~~~v~~ 203 (320)
.+..-+.+ .....++.. .+++...+.++.+++.|+.+...+..-.+ -+++.+.+.++.+.+.| ++.+.+
T Consensus 101 ~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G--~d~i~l 178 (302)
T 2ftp_A 101 AVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMG--CYEVSL 178 (302)
T ss_dssp EEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTT--CSEEEE
T ss_pred EEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcC--CCEEEE
Confidence 88765543 233444332 25566777888899999988766544222 36788899999999998 666655
Q ss_pred eeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCC-cccccChhHHHHHHHcCCceEe---eC--C-ccc--c
Q 020848 204 NALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSA-GRVRFSMPEQALCFLAGANSIF---TG--E-KLL--T 274 (320)
Q Consensus 204 ~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~-g~~~~~~~~~~~~~~~Gan~~~---~~--~-~~~--~ 274 (320)
. +|- ....+.+..+++...+..+|+..+.+-+ .-.++.......++.+|+..+- .| + .|- .
T Consensus 179 ~------DT~----G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aGa~~vd~tv~GlG~cp~a~gr 248 (302)
T 2ftp_A 179 G------DTI----GVGTAGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIAVFDSSVAGLGGCPYAKGA 248 (302)
T ss_dssp E------ESS----SCCCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCCBCGGGTTC
T ss_pred e------CCC----CCcCHHHHHHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEEEecccccCCCCCCCCC
Confidence 4 221 1245778888888777666643222211 0012222334678899998872 22 1 121 2
Q ss_pred CCCCChhHHHHHHHHcCCCc
Q 020848 275 TPNNDFDADQLMFKVLGLTP 294 (320)
Q Consensus 275 ~~~~~~~~~~~~i~~~G~~p 294 (320)
++....++++.+++..|+.+
T Consensus 249 ~GN~~~E~lv~~l~~~g~~~ 268 (302)
T 2ftp_A 249 TGNVASEDVLYLLNGLEIHT 268 (302)
T ss_dssp BCBCBHHHHHHHHHHTTCBC
T ss_pred CCChhHHHHHHHHHhcCCCC
Confidence 45577899999999988765
No 17
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=98.33 E-value=9.7e-05 Score=65.18 Aligned_cols=225 Identities=9% Similarity=0.062 Sum_probs=144.6
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhh-cCceEEEeCCCCCHHHHHHHHHhccCee
Q 020848 54 KLMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAGLTAY 132 (320)
Q Consensus 54 ~~~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~-~~~~i~~~~g~l~~e~l~~L~~aGld~v 132 (320)
..++.++.++.++.+.+.|++.|-++++..+. ..|. +.+..+.++.+++ .+..+..-. ...+.++...++|++.|
T Consensus 23 ~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~-~~p~-~~d~~~~~~~~~~~~~~~~~~l~--~~~~~i~~a~~~g~~~v 98 (307)
T 1ydo_A 23 VWIATEDKITWINQLSRTGLSYIEITSFVHPK-WIPA-LRDAIDVAKGIDREKGVTYAALV--PNQRGLENALEGGINEA 98 (307)
T ss_dssp SCCCHHHHHHHHHHHHTTTCSEEEEEECSCTT-TCGG-GTTHHHHHHHSCCCTTCEEEEEC--CSHHHHHHHHHHTCSEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEECCCcCcc-cccc-cCCHHHHHHHhhhcCCCeEEEEe--CCHHhHHHHHhCCcCEE
Confidence 34899999999999999999999887643321 1121 2233345555543 244432211 25788999999999999
Q ss_pred ccCccccH-HHHhhhCCC--CCHHHHHHHHHHHHHcCCeeeeeEEEEeC------CCHHHHHHHHHHHhcCCCCCCeeee
Q 020848 133 NHNLDTSR-EFYSKIITT--RSYDERLETLKHVREAGINVCSGGIIGLG------EAEEDRVGLLHTLATLPTHPESVPI 203 (320)
Q Consensus 133 ~i~let~~-~~~~~i~~~--~~~~~~l~~i~~a~~~Gi~v~~~~i~Glg------et~ed~~~~l~~l~~l~~~~~~v~~ 203 (320)
.+...+.+ -....++.. ..++...+.++.+++.|+.+..++...++ -+.+.+.+.++.+.++| ++.+.+
T Consensus 99 ~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~G--a~~i~l 176 (307)
T 1ydo_A 99 CVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFG--ISELSL 176 (307)
T ss_dssp EEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHT--CSCEEE
T ss_pred EEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcC--CCEEEE
Confidence 98876553 233334322 13566678888899999998777665332 36788999999999998 665544
Q ss_pred eeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCC-cccccChhHHHHHHHcCCceEe---eCCc---cc--c
Q 020848 204 NALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSA-GRVRFSMPEQALCFLAGANSIF---TGEK---LL--T 274 (320)
Q Consensus 204 ~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~-g~~~~~~~~~~~~~~~Gan~~~---~~~~---~~--~ 274 (320)
. +|- ....+.++.+++...+..+|+..+.+-+ ...++.-.....++.+||..+- .|-+ |- .
T Consensus 177 ~------DT~----G~~~P~~v~~lv~~l~~~~~~~~l~~H~Hnd~Gla~AN~laAv~aGa~~vd~tv~GlGecp~a~gr 246 (307)
T 1ydo_A 177 G------DTI----GAANPAQVETVLEALLARFPANQIALHFHDTRGTALANMVTALQMGITVFDGSAGGLGGCPYAPGS 246 (307)
T ss_dssp E------CSS----CCCCHHHHHHHHHHHHTTSCGGGEEEECBGGGSCHHHHHHHHHHHTCCEEEEBGGGCCEETTEEEE
T ss_pred c------CCC----CCcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCCEEEEcccccCCCCCCCCC
Confidence 2 331 2356888888888888777643332211 0012222234678899998872 2211 11 2
Q ss_pred CCCCChhHHHHHHHHcCCCc
Q 020848 275 TPNNDFDADQLMFKVLGLTP 294 (320)
Q Consensus 275 ~~~~~~~~~~~~i~~~G~~p 294 (320)
++....++++.+++..|+.+
T Consensus 247 aGN~~~E~lv~~L~~~g~~t 266 (307)
T 1ydo_A 247 SGNAATEDIVYMLEQMDIKT 266 (307)
T ss_dssp ECBCBHHHHHHHHHHTTCBC
T ss_pred CCChhHHHHHHHHHhcCCCC
Confidence 45678899999999988865
No 18
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=98.21 E-value=0.00017 Score=64.52 Aligned_cols=221 Identities=11% Similarity=0.051 Sum_probs=138.6
Q ss_pred CCCHHHHHHHHH-HHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHH---hhhc-CceEEEeCCCCCHHHHHHHHHhcc
Q 020848 55 LMTKDAVMQAAQ-KAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKD---IRDM-GMEVCCTLGMLEKHQAIELKKAGL 129 (320)
Q Consensus 55 ~~s~eei~~~~~-~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~---~k~~-~~~i~~~~g~l~~e~l~~L~~aGl 129 (320)
.++.++.++.++ .+.+.|++.|-++++... |..++.+.++.+. +... +..+..- . ...+.++...++|+
T Consensus 37 ~~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~i~~l-~-~~~~~i~~a~~~g~ 110 (337)
T 3ble_A 37 SFSTSEKLNIAKFLLQKLNVDRVEIASARVS----KGELETVQKIMEWAATEQLTERIEILGF-V-DGNKTVDWIKDSGA 110 (337)
T ss_dssp CCCHHHHHHHHHHHHHTTCCSEEEEEETTSC----TTHHHHHHHHHHHHHHTTCGGGEEEEEE-S-STTHHHHHHHHHTC
T ss_pred CcCHHHHHHHHHHHHHHcCCCEEEEeCCCCC----hhHHHHHHHHHhhhhhhccCCCCeEEEE-c-cchhhHHHHHHCCC
Confidence 389999999999 999999999988764321 2233333333332 1111 2232211 1 11238999999999
Q ss_pred CeeccCccccH-HHHhhhCCC--CCHHHHHHHHHHHHHcCCeeeeeEEE---EeCCCHHHHHHHHHHHhcCCCCCCeeee
Q 020848 130 TAYNHNLDTSR-EFYSKIITT--RSYDERLETLKHVREAGINVCSGGII---GLGEAEEDRVGLLHTLATLPTHPESVPI 203 (320)
Q Consensus 130 d~v~i~let~~-~~~~~i~~~--~~~~~~l~~i~~a~~~Gi~v~~~~i~---Glget~ed~~~~l~~l~~l~~~~~~v~~ 203 (320)
+.|.+...+.+ .....++.. ..++...+.++.+++.|+++..++.. +...+.+.+.+.++.+.++| ++.+.+
T Consensus 111 ~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~G--a~~i~l 188 (337)
T 3ble_A 111 KVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEHLSKEH--IERIFL 188 (337)
T ss_dssp CEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHHCHHHHHHHHHHHHTSC--CSEEEE
T ss_pred CEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCcCCHHHHHHHHHHHHHcC--CCEEEE
Confidence 99998776663 334444432 24567777888889999998777654 33346788889999999998 555443
Q ss_pred eeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCC-cccccChhHHHHHHHcCCceEee---CCccccCCCCC
Q 020848 204 NALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSA-GRVRFSMPEQALCFLAGANSIFT---GEKLLTTPNND 279 (320)
Q Consensus 204 ~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~-g~~~~~~~~~~~~~~~Gan~~~~---~~~~~~~~~~~ 279 (320)
++|- ....+.+..+++...+..+|+..+.+-+ ...++--.....++.+||..+-. |-+ ..++..+
T Consensus 189 ------~DT~----G~~~P~~v~~lv~~l~~~~p~~~i~~H~Hnd~GlA~AN~laAv~aGa~~vd~tv~GlG-~~aGN~~ 257 (337)
T 3ble_A 189 ------PDTL----GVLSPEETFQGVDSLIQKYPDIHFEFHGHNDYDLSVANSLQAIRAGVKGLHASINGLG-ERAGNTP 257 (337)
T ss_dssp ------ECTT----CCCCHHHHHHHHHHHHHHCTTSCEEEECBCTTSCHHHHHHHHHHTTCSEEEEBGGGCS-STTCBCB
T ss_pred ------ecCC----CCcCHHHHHHHHHHHHHhcCCCeEEEEecCCcchHHHHHHHHHHhCCCEEEEeccccc-ccccchh
Confidence 2331 2356888889888888878754333211 00122222346788999998732 211 1345677
Q ss_pred hhHHHHHHHHc-CCCc
Q 020848 280 FDADQLMFKVL-GLTP 294 (320)
Q Consensus 280 ~~~~~~~i~~~-G~~p 294 (320)
.++++.+++.. |+.+
T Consensus 258 ~E~lv~~L~~~~g~~t 273 (337)
T 3ble_A 258 LEALVTTIHDKSNSKT 273 (337)
T ss_dssp HHHHHHHHHHHSSCCC
T ss_pred HHHHHHHHHHhcCCCC
Confidence 88888888887 7654
No 19
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=97.85 E-value=0.0012 Score=57.85 Aligned_cols=224 Identities=11% Similarity=0.007 Sum_probs=131.9
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeCCCC-CHHHHHHHHHhccCee
Q 020848 54 KLMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGML-EKHQAIELKKAGLTAY 132 (320)
Q Consensus 54 ~~~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l-~~e~l~~L~~aGld~v 132 (320)
..++.++.++.++.+.+.|++.|-+++.. . .|..++.+..+.+..+...+...+.+..- -+..++.++++|++.|
T Consensus 22 ~~~~~~~K~~i~~~L~~~Gv~~IE~g~p~---~-~~~d~e~v~~i~~~~~~~~i~~l~~~~~~di~~a~~~~~~ag~~~v 97 (293)
T 3ewb_X 22 VNFDVKEKIQIALQLEKLGIDVIEAGFPI---S-SPGDFECVKAIAKAIKHCSVTGLARCVEGDIDRAEEALKDAVSPQI 97 (293)
T ss_dssp -CCCHHHHHHHHHHHHHHTCSEEEEECGG---G-CHHHHHHHHHHHHHCCSSEEEEEEESSHHHHHHHHHHHTTCSSEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCC---C-CccHHHHHHHHHHhcCCCEEEEEecCCHHHHHHHHHHHhhcCCCEE
Confidence 44899999999999999999999876421 1 13333444333333222122223332110 1223344455799998
Q ss_pred ccCccccH-HHHhhhCCC--CCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeeeeeeec
Q 020848 133 NHNLDTSR-EFYSKIITT--RSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAV 209 (320)
Q Consensus 133 ~i~let~~-~~~~~i~~~--~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~~~p~ 209 (320)
.+.+-+.+ .....++.. ..++...+.++.+++.|..+..++..+..-+.+.+.+.++.+.++| ++.|.+
T Consensus 98 ~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d~~~~~~~~~~~~~~~~~~~G--~~~i~l------ 169 (293)
T 3ewb_X 98 HIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPEDATRSDRAFLIEAVQTAIDAG--ATVINI------ 169 (293)
T ss_dssp EEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEETGGGSCHHHHHHHHHHHHHTT--CCEEEE------
T ss_pred EEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccCCCCCHHHHHHHHHHHHHcC--CCEEEe------
Confidence 88776653 223333221 1345556667778888988776665444457788899999999998 555433
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHhCCCce-eecC--C-cccccChhHHHHHHHcCCceEee---CCccccCCCCChhH
Q 020848 210 KGTPLQDQKPVEIWEMIRMIATARIVMPKAM-VRLS--A-GRVRFSMPEQALCFLAGANSIFT---GEKLLTTPNNDFDA 282 (320)
Q Consensus 210 ~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~-i~~~--~-g~~~~~~~~~~~~~~~Gan~~~~---~~~~~~~~~~~~~~ 282 (320)
++|- ....+.++.+++...+..+|... +++. . ...++.-.....++.+||..+-. |-+ ..++....++
T Consensus 170 ~DT~----G~~~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd~Gla~AN~laA~~aGa~~vd~sv~GlG-eraGN~~~E~ 244 (293)
T 3ewb_X 170 PDTV----GYTNPTEFGQLFQDLRREIKQFDDIIFASHCHDDLGMATANALAAIENGARRVEGTINGIG-ERAGNTALEE 244 (293)
T ss_dssp ECSS----SCCCHHHHHHHHHHHHHHCTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGGCC-TTTCBCBHHH
T ss_pred cCCC----CCCCHHHHHHHHHHHHHhcCCccCceEEEEeCCCcChHHHHHHHHHHhCCCEEEeeccccc-cccccHhHHH
Confidence 2332 23568888888888888887521 2221 0 00112122346788999998722 211 1345677888
Q ss_pred HHHHHHH----cCCCc
Q 020848 283 DQLMFKV----LGLTP 294 (320)
Q Consensus 283 ~~~~i~~----~G~~p 294 (320)
++.+++. .|+.+
T Consensus 245 vv~~L~~~~~~~g~~t 260 (293)
T 3ewb_X 245 VAVALHIRKDFYQAET 260 (293)
T ss_dssp HHHHHHHTHHHHCEEE
T ss_pred HHHHHHhhhhhcCCCC
Confidence 8888875 57654
No 20
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=97.83 E-value=0.0022 Score=58.77 Aligned_cols=190 Identities=16% Similarity=0.145 Sum_probs=119.5
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCc--eEEEeCCCCCHHHHHHHHHhccCe
Q 020848 54 KLMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGM--EVCCTLGMLEKHQAIELKKAGLTA 131 (320)
Q Consensus 54 ~~~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~--~i~~~~g~l~~e~l~~L~~aGld~ 131 (320)
..++.++-++.++.+.+.|++.|-++. |..-+.-.+.++.+.+.+. .++. ......+.++...++|++.
T Consensus 56 ~~~s~eeKl~Ia~~L~~~Gv~~IEvG~--------P~asp~d~~~~~~i~~~~~~~~v~~-~~r~~~~di~~A~~aG~~~ 126 (423)
T 3ivs_A 56 AFFDTEKKIQIAKALDNFGVDYIELTS--------PVASEQSRQDCEAICKLGLKCKILT-HIRCHMDDARVAVETGVDG 126 (423)
T ss_dssp CCCCHHHHHHHHHHHHHHTCSEEEECC--------TTSCHHHHHHHHHHHTSCCSSEEEE-EEESCHHHHHHHHHTTCSE
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEEee--------cccCHHHHHHHHHHHhcCCCCEEEE-eeccChhhHHHHHHcCCCE
Confidence 348999999999999999999998753 1222344455555554433 3322 1224577789999999999
Q ss_pred eccCccccHHHHh--hhCC--CCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeeeeee
Q 020848 132 YNHNLDTSREFYS--KIIT--TRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALL 207 (320)
Q Consensus 132 v~i~let~~~~~~--~i~~--~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~~~ 207 (320)
|.+.+-+.+ .+. .++. ...++...+.++.+++.|+.+..++.-+...+.+.+.+.++.+.+.| ++.+.+
T Consensus 127 V~i~~s~Sd-~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~eda~r~d~~~~~~v~~~~~~~G--a~~i~l---- 199 (423)
T 3ivs_A 127 VDVVIGTSQ-YLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSEDSFRSDLVDLLSLYKAVDKIG--VNRVGI---- 199 (423)
T ss_dssp EEEEEEC--------------CHHHHHHHHHHHHHHTTTCEEEEEEESGGGSCHHHHHHHHHHHHHHC--CSEEEE----
T ss_pred EEEEeeccH-HHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEccCcCCCHHHHHHHHHHHHHhC--CCcccc----
Confidence 998876653 222 2222 12356777889999999999887766655668888999999999998 554433
Q ss_pred ecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCC-cccccChhHHHHHHHcCCceE
Q 020848 208 AVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSA-GRVRFSMPEQALCFLAGANSI 266 (320)
Q Consensus 208 p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~-g~~~~~~~~~~~~~~~Gan~~ 266 (320)
++|- ....+.++.+++...+...+ ..+.+-+ ...++.-.....++.+||..+
T Consensus 200 --~DTv----G~~~P~~v~~lv~~l~~~~~-~~i~~H~Hnd~GlAvAN~laAv~aGa~~v 252 (423)
T 3ivs_A 200 --ADTV----GCATPRQVYDLIRTLRGVVS-CDIECHFHNDTGMAIANAYCALEAGATHI 252 (423)
T ss_dssp --EETT----SCCCHHHHHHHHHHHHHHCS-SEEEEEEBCTTSCHHHHHHHHHHTTCCEE
T ss_pred --CCcc----CcCCHHHHHHHHHHHHhhcC-CeEEEEECCCCchHHHHHHHHHHhCCCEE
Confidence 2332 23457777777776665543 2222110 001111223467889999987
No 21
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=97.74 E-value=0.0027 Score=56.94 Aligned_cols=214 Identities=12% Similarity=0.106 Sum_probs=138.3
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEe----c-ccCCCCCCchhHHHHHHHHHHhhhc--CceE--EEeCCCCCHHHHHHHH
Q 020848 55 LMTKDAVMQAAQKAKEAGSTRFCMG----A-AWRDTIGRKTNFNQILEYVKDIRDM--GMEV--CCTLGMLEKHQAIELK 125 (320)
Q Consensus 55 ~~s~eei~~~~~~~~~~g~~~i~l~----~-g~~~~~ge~~~~~~l~~~i~~~k~~--~~~i--~~~~g~l~~e~l~~L~ 125 (320)
.++.++.++.++.+.+.|++.|-++ . +..+..| | ....-.+.++.+++. +.++ +..++.-.++.+++..
T Consensus 26 ~~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g-~-~~~~~~e~l~~i~~~~~~~~i~~l~~p~~~~~~~i~~a~ 103 (345)
T 1nvm_A 26 QYTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYG-F-GRHTDLEYIEAVAGEISHAQIATLLLPGIGSVHDLKNAY 103 (345)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTB-C-CSSCHHHHHHHHHTTCSSSEEEEEECBTTBCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccc-C-CCCCHHHHHHHHHhhCCCCEEEEEecCCcccHHHHHHHH
Confidence 3899999999999999999999885 1 1111112 2 122344556665532 4443 3344555688999999
Q ss_pred HhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeeee
Q 020848 126 KAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINA 205 (320)
Q Consensus 126 ~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~ 205 (320)
++|++.+.+.+... ..+...+.++.+++.|+.+...+.-...-+++.+.+.++.+.+.| ++.|++
T Consensus 104 ~aGvd~v~I~~~~s-----------~~~~~~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~G--a~~i~l-- 168 (345)
T 1nvm_A 104 QAGARVVRVATHCT-----------EADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYG--ATCIYM-- 168 (345)
T ss_dssp HHTCCEEEEEEETT-----------CGGGGHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHHT--CSEEEE--
T ss_pred hCCcCEEEEEEecc-----------HHHHHHHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHCC--CCEEEE--
Confidence 99999988753211 123456778889999998777765545667888999999999998 554433
Q ss_pred eeecCCCCCCCCCCCCHHHHHHHHHHHHHhCC-CceeecCC-cccccChhHHHHHHHcCCceEe---eCCccccCCCCCh
Q 020848 206 LLAVKGTPLQDQKPVEIWEMIRMIATARIVMP-KAMVRLSA-GRVRFSMPEQALCFLAGANSIF---TGEKLLTTPNNDF 280 (320)
Q Consensus 206 ~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p-~~~i~~~~-g~~~~~~~~~~~~~~~Gan~~~---~~~~~~~~~~~~~ 280 (320)
++|- ....+.++.+++...|..+| +..+.+-+ ...++.-.....++.+||+.+- .|-+ ..++..+.
T Consensus 169 ----~DT~----G~~~P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~avAn~laA~~aGa~~vd~tv~GlG-~~aGN~~l 239 (345)
T 1nvm_A 169 ----ADSG----GAMSMNDIRDRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEGCDRVDASLAGMG-AGAGNAPL 239 (345)
T ss_dssp ----ECTT----CCCCHHHHHHHHHHHHHHSCTTSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGGCS-STTCBCBH
T ss_pred ----CCCc----CccCHHHHHHHHHHHHHhcCCCceEEEEECCCccHHHHHHHHHHHcCCCEEEecchhcc-CCccCcCH
Confidence 2432 12347888888888888886 43332211 0012222234678899998772 2211 13566789
Q ss_pred hHHHHHHHHcCCCc
Q 020848 281 DADQLMFKVLGLTP 294 (320)
Q Consensus 281 ~~~~~~i~~~G~~p 294 (320)
++++.+++..|+.+
T Consensus 240 e~lv~~L~~~g~~~ 253 (345)
T 1nvm_A 240 EVFIAVAERLGWNH 253 (345)
T ss_dssp HHHHHHHHHHTCBC
T ss_pred HHHHHHHHhcCCCC
Confidence 99999999988764
No 22
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=97.64 E-value=0.0033 Score=55.79 Aligned_cols=221 Identities=12% Similarity=0.118 Sum_probs=134.4
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHh----cc
Q 020848 54 KLMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKA----GL 129 (320)
Q Consensus 54 ~~~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~a----Gl 129 (320)
..++.++-++.++.+.+.|++.|-++. +... |..++.+.++.+.++ +..+..- .....+.++.-.++ |+
T Consensus 23 ~~~~~~~Kl~ia~~L~~~Gv~~IE~g~---p~~~-~~d~e~v~~i~~~~~--~~~i~~l-~r~~~~~i~~a~~al~~ag~ 95 (325)
T 3eeg_A 23 CQLNTEEKIIVAKALDELGVDVIEAGF---PVSS-PGDFNSVVEITKAVT--RPTICAL-TRAKEADINIAGEALRFAKR 95 (325)
T ss_dssp --CCTTHHHHHHHHHHHHTCSEEEEEC---TTSC-HHHHHHHHHHHHHCC--SSEEEEE-CCSCHHHHHHHHHHHTTCSS
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeC---CCCC-HhHHHHHHHHHHhCC--CCEEEEe-ecCCHHHHHHHHHhhcccCC
Confidence 348899999999999999999988763 2112 333444433333222 3343211 12234455544444 99
Q ss_pred CeeccCccccH-HHHhhhCC--CCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeeeee
Q 020848 130 TAYNHNLDTSR-EFYSKIIT--TRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINAL 206 (320)
Q Consensus 130 d~v~i~let~~-~~~~~i~~--~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~~ 206 (320)
+.|.+..-+.+ .....++. ...++...+.++.+++.|+.+..++..+..-+.+.+.+.++.+.+.| ++.|.+
T Consensus 96 ~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~d~~~~~~~~~~~~~~~~~~~G--~~~i~l--- 170 (325)
T 3eeg_A 96 SRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCEDAGRADQAFLARMVEAVIEAG--ADVVNI--- 170 (325)
T ss_dssp EEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEETGGGSCHHHHHHHHHHHHHHT--CSEEEC---
T ss_pred CEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEccccccchHHHHHHHHHHHHhcC--CCEEEe---
Confidence 99988766663 23333333 34677788899999999998877766655567888899999999998 554433
Q ss_pred eecCCCCCCCCCCCCHHHHHHHHHHHHHhCCC---ceeecCC-cccccChhHHHHHHHcCCceEee---CCccccCCCCC
Q 020848 207 LAVKGTPLQDQKPVEIWEMIRMIATARIVMPK---AMVRLSA-GRVRFSMPEQALCFLAGANSIFT---GEKLLTTPNND 279 (320)
Q Consensus 207 ~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~---~~i~~~~-g~~~~~~~~~~~~~~~Gan~~~~---~~~~~~~~~~~ 279 (320)
++|- ....+.++.+++...+..+|+ ..+.+-+ ...++.-.....++.+||..+-. |-+ ..++...
T Consensus 171 ---~DT~----G~~~P~~v~~lv~~l~~~~~~~~~~~i~~H~Hnd~GlA~AN~laA~~aGa~~vd~tv~GlG-er~GN~~ 242 (325)
T 3eeg_A 171 ---PDTT----GYMLPWQYGERIKYLMDNVSNIDKAILSAHCHNDLGLATANSLAALQNGARQVECTINGIG-ERAGNTA 242 (325)
T ss_dssp ---CBSS----SCCCHHHHHHHHHHHHHHCSCGGGSEEEECBCCTTSCHHHHHHHHHHHTCCEEEEBGGGCC-STTCCCB
T ss_pred ---cCcc----CCcCHHHHHHHHHHHHHhCCCCCceEEEEEeCCCCCHHHHHHHHHHHhCCCEEEEeccccc-ccccchh
Confidence 3432 235678888888888888875 3332211 00111122345688999988722 211 1345677
Q ss_pred hhHHHHHHHH----cCCCc
Q 020848 280 FDADQLMFKV----LGLTP 294 (320)
Q Consensus 280 ~~~~~~~i~~----~G~~p 294 (320)
.++++.+++. +|+.+
T Consensus 243 lE~vv~~L~~~~~~~g~~t 261 (325)
T 3eeg_A 243 LEEVVMAMECHKETLGLET 261 (325)
T ss_dssp HHHHHHHHHHTHHHHCEEC
T ss_pred HHHHHHHHHhhhhccCCCC
Confidence 8888888874 56654
No 23
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=97.61 E-value=0.0085 Score=54.06 Aligned_cols=220 Identities=14% Similarity=0.109 Sum_probs=131.2
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHH----HHHHhccC
Q 020848 55 LMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAI----ELKKAGLT 130 (320)
Q Consensus 55 ~~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~----~L~~aGld 130 (320)
.++.++-++.++.+.+.|++.|-.+.. ... |..++.+..+.+.++...+...... ..+.++ .|+.+|++
T Consensus 30 ~~~~~~Kl~ia~~L~~~Gv~~IE~g~p---~~~-~~d~e~v~~i~~~~~~~~i~~l~r~---~~~di~~a~~al~~ag~~ 102 (370)
T 3rmj_A 30 AMTKEEKIRVARQLEKLGVDIIEAGFA---AAS-PGDFEAVNAIAKTITKSTVCSLSRA---IERDIRQAGEAVAPAPKK 102 (370)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEEEG---GGC-HHHHHHHHHHHTTCSSSEEEEEEES---SHHHHHHHHHHHTTSSSE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEeCC---CCC-HHHHHHHHHHHHhCCCCeEEEEecC---CHHHHHHHHHHHhhCCCC
Confidence 489999999999999999998877541 111 3334444333332222112222221 344444 44558999
Q ss_pred eeccCccccH-HHHhhhCCC--CCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeeeeee
Q 020848 131 AYNHNLDTSR-EFYSKIITT--RSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALL 207 (320)
Q Consensus 131 ~v~i~let~~-~~~~~i~~~--~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~~~ 207 (320)
.|.+..-+.+ ....+++.. ...+...+.++.+++.|..+..+...+..-+.+.+.+.++.+.+.| ++.|.+
T Consensus 103 ~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~ed~~r~~~~~~~~~~~~~~~~G--a~~i~l---- 176 (370)
T 3rmj_A 103 RIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSCEDALRSEIDFLAEICGAVIEAG--ATTINI---- 176 (370)
T ss_dssp EEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEETGGGSCHHHHHHHHHHHHHHT--CCEEEE----
T ss_pred EEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEecCCCCccCHHHHHHHHHHHHHcC--CCEEEe----
Confidence 9998877763 333344322 1344555567778888888766666555567888899999999998 554433
Q ss_pred ecCCCCCCCCCCCCHHHHHHHHHHHHHhCCC---ceeecCC-cccccChhHHHHHHHcCCceEe---eCCccccCCCCCh
Q 020848 208 AVKGTPLQDQKPVEIWEMIRMIATARIVMPK---AMVRLSA-GRVRFSMPEQALCFLAGANSIF---TGEKLLTTPNNDF 280 (320)
Q Consensus 208 p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~---~~i~~~~-g~~~~~~~~~~~~~~~Gan~~~---~~~~~~~~~~~~~ 280 (320)
++|- ....|.++.+++...+..+|. ..+.+-+ ...++--.....++.+||..+- .|-+ ..++....
T Consensus 177 --~DT~----G~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd~GlAvAN~laAv~aGa~~vd~tv~GlG-eraGN~~l 249 (370)
T 3rmj_A 177 --PDTV----GYSIPYKTEEFFRELIAKTPNGGKVVWSAHCHNDLGLAVANSLAALKGGARQVECTVNGLG-ERAGNASV 249 (370)
T ss_dssp --ECSS----SCCCHHHHHHHHHHHHHHSTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGGCS-STTCBCBH
T ss_pred --cCcc----CCcCHHHHHHHHHHHHHhCCCcCceEEEEEeCCCCChHHHHHHHHHHhCCCEEEEeccccC-cccccccH
Confidence 2432 235688888888888877875 3232211 0011112234678899999872 2211 13455677
Q ss_pred hHHHHHHHH----cCCCc
Q 020848 281 DADQLMFKV----LGLTP 294 (320)
Q Consensus 281 ~~~~~~i~~----~G~~p 294 (320)
++++.+++. .|+.+
T Consensus 250 E~vv~~L~~~~~~~g~~t 267 (370)
T 3rmj_A 250 EEIVMALKVRHDLFGLET 267 (370)
T ss_dssp HHHHHHHHHTHHHHCCBC
T ss_pred HHHHHHHHhhhhccCCCC
Confidence 777777753 46654
No 24
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=97.38 E-value=0.024 Score=52.60 Aligned_cols=215 Identities=11% Similarity=0.086 Sum_probs=131.8
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecccCC-----CCCCchhHHHHHHHHHHhhhcCceEEEe--C--CCC------CHH
Q 020848 55 LMTKDAVMQAAQKAKEAGSTRFCMGAAWRD-----TIGRKTNFNQILEYVKDIRDMGMEVCCT--L--GML------EKH 119 (320)
Q Consensus 55 ~~s~eei~~~~~~~~~~g~~~i~l~~g~~~-----~~ge~~~~~~l~~~i~~~k~~~~~i~~~--~--g~l------~~e 119 (320)
.++.++.++.++.+.+.|+..|-.+++... ... +..++.+..+.+.++...+.+.+. | |.. .+.
T Consensus 26 ~~~~~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~-~d~~e~l~~i~~~~~~~~l~~l~R~~N~~G~~~~~ddv~~~ 104 (464)
T 2nx9_A 26 RLRIDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLG-EDPWQRLRLLKQAMPNTPLQMLLRGQNLLGYRHYADDVVDT 104 (464)
T ss_dssp CCCGGGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTTC-CCHHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcCccccchhhccC-CCHHHHHHHHHHhCCCCeEEEEeccccccCcccccchhhHH
Confidence 378899999999999999999988764210 011 122332222222222223333332 1 321 256
Q ss_pred HHHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeE--EEEeCCCHHHHHHHHHHHhcCCCC
Q 020848 120 QAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGG--IIGLGEAEEDRVGLLHTLATLPTH 197 (320)
Q Consensus 120 ~l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~--i~Glget~ed~~~~l~~l~~l~~~ 197 (320)
.++...++|++.+.+...+. +.+...+.++.+++.|..+..++ ..|...+.+.+.+.++.+.+.|
T Consensus 105 ~v~~a~~~Gvd~i~if~~~s-----------d~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~G-- 171 (464)
T 2nx9_A 105 FVERAVKNGMDVFRVFDAMN-----------DVRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELG-- 171 (464)
T ss_dssp HHHHHHHTTCCEEEECCTTC-----------CTHHHHHHHHHHHHTTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTT--
T ss_pred HHHHHHhCCcCEEEEEEecC-----------HHHHHHHHHHHHHHCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCC--
Confidence 68889999999988764332 23456788999999999876555 4455568899999999999998
Q ss_pred CCeeeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCC-cccccChhHHHHHHHcCCceEeeC-Ccc-cc
Q 020848 198 PESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSA-GRVRFSMPEQALCFLAGANSIFTG-EKL-LT 274 (320)
Q Consensus 198 ~~~v~~~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~-g~~~~~~~~~~~~~~~Gan~~~~~-~~~-~~ 274 (320)
++.|.+ ++|. ....+.++.+++...+..++ ..+.+-+ ...++.-.....++.+||+.+-.. .++ ..
T Consensus 172 ad~I~l------~DT~----G~~~P~~v~~lv~~l~~~~~-~~i~~H~Hnd~GlAvAN~laAv~AGa~~VD~ti~g~ger 240 (464)
T 2nx9_A 172 VDSIAL------KDMA----GILTPYAAEELVSTLKKQVD-VELHLHCHSTAGLADMTLLKAIEAGVDRVDTAISSMSGT 240 (464)
T ss_dssp CSEEEE------EETT----SCCCHHHHHHHHHHHHHHCC-SCEEEEECCTTSCHHHHHHHHHHTTCSEEEEBCGGGCST
T ss_pred CCEEEE------cCCC----CCcCHHHHHHHHHHHHHhcC-CeEEEEECCCCChHHHHHHHHHHhCCCEEEEeccccCCC
Confidence 655444 2221 23457888888887776553 2222110 001111223467889999987221 011 12
Q ss_pred CCCCChhHHHHHHHHcCCCc
Q 020848 275 TPNNDFDADQLMFKVLGLTP 294 (320)
Q Consensus 275 ~~~~~~~~~~~~i~~~G~~p 294 (320)
++..+.++++.+++..|+.+
T Consensus 241 tGN~~lE~lv~~L~~~g~~t 260 (464)
T 2nx9_A 241 YGHPATESLVATLQGTGYDT 260 (464)
T ss_dssp TSCCBHHHHHHHHTTSTTCC
T ss_pred CcCHHHHHHHHHHHhcCCCc
Confidence 56678899999999888764
No 25
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=97.37 E-value=0.017 Score=52.33 Aligned_cols=208 Identities=14% Similarity=0.153 Sum_probs=124.3
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCc--eEEEeCCCCCHHHHHHHHHhccCee
Q 020848 55 LMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGM--EVCCTLGMLEKHQAIELKKAGLTAY 132 (320)
Q Consensus 55 ~~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~--~i~~~~g~l~~e~l~~L~~aGld~v 132 (320)
.++.++.++.++.+.+.|++.|-+++ |...+...+.++.+++.+. .+..-+ .-..+.++...++|++.+
T Consensus 21 ~~~~~~k~~ia~~L~~~Gv~~IE~g~--------p~~~~~~~~~~~~i~~~~~~~~v~~~~-r~~~~di~~a~~~g~~~v 91 (382)
T 2ztj_A 21 NFSTQDKVEIAKALDEFGIEYIEVTT--------PVASPQSRKDAEVLASLGLKAKVVTHI-QCRLDAAKVAVETGVQGI 91 (382)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEECC--------TTSCHHHHHHHHHHHTSCCSSEEEEEE-ESCHHHHHHHHHTTCSEE
T ss_pred CcCHHHHHHHHHHHHHcCcCEEEEcC--------CcCCHHHHHHHHHHHhcCCCcEEEEEc-ccChhhHHHHHHcCCCEE
Confidence 48999999999999999999998754 2233445566777765443 333221 124677899999999998
Q ss_pred ccCccccHHHHhhhCCCCC----HHHHHHHHHHHHHcC--CeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeeeee
Q 020848 133 NHNLDTSREFYSKIITTRS----YDERLETLKHVREAG--INVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINAL 206 (320)
Q Consensus 133 ~i~let~~~~~~~i~~~~~----~~~~l~~i~~a~~~G--i~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~~ 206 (320)
.+.+-+.+ .+.. .-+.+ ++...+.++.+++.| +.+..++.-+...+.+.+.+.++.+.+. . +.+.+
T Consensus 92 ~i~~~~s~-~~~~-~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~~~~~~~~~~~~~~~~~~~-a--~~i~l--- 163 (382)
T 2ztj_A 92 DLLFGTSK-YLRA-PHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTFRSEEQDLLAVYEAVAPY-V--DRVGL--- 163 (382)
T ss_dssp EEEECC----------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTTTSCHHHHHHHHHHHGGG-C--SEEEE---
T ss_pred EEEeccCH-HHHH-HhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeCCCCCHHHHHHHHHHHHHh-c--CEEEe---
Confidence 88765543 3333 22344 455678888899999 8777666554456778888888888776 3 33332
Q ss_pred eecCCCCCCCCCCCCHHHHHHHHHHHHHhC-CCceeecCC-cccccChhHHHHHHHcCCceEe---eCCccccCCCCChh
Q 020848 207 LAVKGTPLQDQKPVEIWEMIRMIATARIVM-PKAMVRLSA-GRVRFSMPEQALCFLAGANSIF---TGEKLLTTPNNDFD 281 (320)
Q Consensus 207 ~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~-p~~~i~~~~-g~~~~~~~~~~~~~~~Gan~~~---~~~~~~~~~~~~~~ 281 (320)
++|- ....|.++.+++...+..+ ++..+.+-+ ...++--.....++.+||+.+- .|-+ ..++..+.+
T Consensus 164 ---~DT~----G~~~P~~~~~lv~~l~~~~~~~~~i~~H~Hnd~GlAvAN~laAv~aGa~~vd~tv~GlG-eraGN~~lE 235 (382)
T 2ztj_A 164 ---ADTV----GVATPRQVYALVREVRRVVGPRVDIEFHGHNDTGCAIANAYEAIEAGATHVDTTILGIG-ERNGITPLG 235 (382)
T ss_dssp ---EETT----SCCCHHHHHHHHHHHHHHHTTTSEEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCS-STTCBCBHH
T ss_pred ---cCCC----CCCCHHHHHHHHHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEEEEcccccc-ccccchhHH
Confidence 2332 2345777788877776653 443332211 0011212234678899999872 2211 123445555
Q ss_pred HHHHHH
Q 020848 282 ADQLMF 287 (320)
Q Consensus 282 ~~~~~i 287 (320)
+++..+
T Consensus 236 ~vv~~L 241 (382)
T 2ztj_A 236 GFLARM 241 (382)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555333
No 26
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=97.27 E-value=0.0064 Score=57.39 Aligned_cols=215 Identities=13% Similarity=0.103 Sum_probs=133.5
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecccCC-----CCCCchhHHHHHHHHHHhhhcCceEEEe--C--CC------CCHH
Q 020848 55 LMTKDAVMQAAQKAKEAGSTRFCMGAAWRD-----TIGRKTNFNQILEYVKDIRDMGMEVCCT--L--GM------LEKH 119 (320)
Q Consensus 55 ~~s~eei~~~~~~~~~~g~~~i~l~~g~~~-----~~ge~~~~~~l~~~i~~~k~~~~~i~~~--~--g~------l~~e 119 (320)
.++.++.++.++.+.+.|++.|-++++... ..+ +..++.+..+.+.++...+.+++. | |. +.+.
T Consensus 43 ~~~tedKl~Ia~~L~~~Gv~~IE~G~patF~~~~rfl~-~d~~e~lr~l~~~~~~~~l~~L~R~~N~~G~~~ypddv~~~ 121 (539)
T 1rqb_A 43 RMAMEDMVGACADIDAAGYWSVECWGGATYDSCIRFLN-EDPWERLRTFRKLMPNSRLQMLLRGQNLLGYRHYNDEVVDR 121 (539)
T ss_dssp CCCGGGTGGGHHHHHHTTCSEEEEEETTHHHHHHHTSC-CCHHHHHHHHHHHCTTSCEEEEECGGGTTSSSCCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcccccccchhccC-CCHHHHHHHHHHhCCCCEEEEEeccccccCcccCcccccHH
Confidence 388999999999999999999988764210 011 122333333222223323333332 1 32 1366
Q ss_pred HHHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeE--EEEeCCCHHHHHHHHHHHhcCCCC
Q 020848 120 QAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGG--IIGLGEAEEDRVGLLHTLATLPTH 197 (320)
Q Consensus 120 ~l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~--i~Glget~ed~~~~l~~l~~l~~~ 197 (320)
.++.+.++|++.+.+...+. +.+...+.++.+++.|..+...+ ..|...+.+.+.+.++.+.+.|
T Consensus 122 ~ve~a~~aGvd~vrIf~s~s-----------d~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~G-- 188 (539)
T 1rqb_A 122 FVDKSAENGMDVFRVFDAMN-----------DPRNMAHAMAAVKKAGKHAQGTICYTISPVHTVEGYVKLAGQLLDMG-- 188 (539)
T ss_dssp HHHHHHHTTCCEEEECCTTC-----------CTHHHHHHHHHHHHTTCEEEEEEECCCSTTCCHHHHHHHHHHHHHTT--
T ss_pred HHHHHHhCCCCEEEEEEehh-----------HHHHHHHHHHHHHHCCCeEEEEEEeeeCCCCCHHHHHHHHHHHHHcC--
Confidence 78999999999988764332 22556788999999999875444 4455568899999999999998
Q ss_pred CCeeeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCC-CceeecCC-cccccChhHHHHHHHcCCceEee---CCcc
Q 020848 198 PESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMP-KAMVRLSA-GRVRFSMPEQALCFLAGANSIFT---GEKL 272 (320)
Q Consensus 198 ~~~v~~~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p-~~~i~~~~-g~~~~~~~~~~~~~~~Gan~~~~---~~~~ 272 (320)
++.|.+ ++|- ....+.++.+++...+..+| +..+.+-+ ...++.-.....++.+||+.+-. |-+
T Consensus 189 ad~I~L------~DT~----G~~~P~~v~~lv~~l~~~~p~~i~I~~H~Hnd~GlAvAN~laAveAGa~~VD~ti~g~G- 257 (539)
T 1rqb_A 189 ADSIAL------KDMA----ALLKPQPAYDIIKAIKDTYGQKTQINLHCHSTTGVTEVSLMKAIEAGVDVVDTAISSMS- 257 (539)
T ss_dssp CSEEEE------EETT----CCCCHHHHHHHHHHHHHHHCTTCCEEEEEBCTTSCHHHHHHHHHHTTCSEEEEBCGGGC-
T ss_pred CCEEEe------CCCC----CCcCHHHHHHHHHHHHHhcCCCceEEEEeCCCCChHHHHHHHHHHhCCCEEEEeccccC-
Confidence 654443 2221 23457888888888777676 43332211 00111122346788999998722 211
Q ss_pred ccCCCCChhHHHHHHHHcCCCc
Q 020848 273 LTTPNNDFDADQLMFKVLGLTP 294 (320)
Q Consensus 273 ~~~~~~~~~~~~~~i~~~G~~p 294 (320)
..++..+.++++.+++..|+.+
T Consensus 258 ertGN~~lE~lv~~L~~~g~~t 279 (539)
T 1rqb_A 258 LGPGHNPTESVAEMLEGTGYTT 279 (539)
T ss_dssp STTSBCBHHHHHHHTTTSSEEC
T ss_pred CCccChhHHHHHHHHHhcCCCc
Confidence 1255677888888888877654
No 27
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=97.16 E-value=0.096 Score=45.04 Aligned_cols=195 Identities=17% Similarity=0.212 Sum_probs=119.1
Q ss_pred HHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHhccCeeccCccc
Q 020848 60 AVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDT 138 (320)
Q Consensus 60 ei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~let 138 (320)
...+.++.+.+.|+..+.+.+ ++.++..-.+.++.++ ..++++......+++.++.+.+.+|.|.|.+....
T Consensus 73 ~p~~~A~~y~~~GA~~isvlt-------d~~~f~Gs~~~l~~ir~~v~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~a~ 145 (272)
T 3qja_A 73 DPAKLAQAYQDGGARIVSVVT-------EQRRFQGSLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHGADMLLLIVAA 145 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEEC-------CGGGHHHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEEEGGG
T ss_pred CHHHHHHHHHHcCCCEEEEec-------ChhhcCCCHHHHHHHHHhCCCCEEECccccCHHHHHHHHHcCCCEEEEeccc
Confidence 344556667778999998764 2446666566777776 45778766666788888999999999999986544
Q ss_pred cHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeeeeeeecCCCCCCCCC
Q 020848 139 SREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQK 218 (320)
Q Consensus 139 ~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~~~p~~gt~~~~~~ 218 (320)
. +.++..+.++.+++.|+.+ ++.. .+.+++...+ ++| ++.++++. ...+.+
T Consensus 146 l-----------~~~~l~~l~~~a~~lGl~~----lvev-~t~ee~~~A~----~~G--ad~IGv~~---r~l~~~---- 196 (272)
T 3qja_A 146 L-----------EQSVLVSMLDRTESLGMTA----LVEV-HTEQEADRAL----KAG--AKVIGVNA---RDLMTL---- 196 (272)
T ss_dssp S-----------CHHHHHHHHHHHHHTTCEE----EEEE-SSHHHHHHHH----HHT--CSEEEEES---BCTTTC----
T ss_pred C-----------CHHHHHHHHHHHHHCCCcE----EEEc-CCHHHHHHHH----HCC--CCEEEECC---Cccccc----
Confidence 3 1233345567777888775 2222 3666654433 456 67787763 221222
Q ss_pred CCCHHHHHHHHHHHHHhCCCceeecCCcccccC-hhHHHHHHHcCCceEeeCCccccCCCCChhHHHHHHHHcCCCcCCC
Q 020848 219 PVEIWEMIRMIATARIVMPKAMVRLSAGRVRFS-MPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKVLGLTPKAP 297 (320)
Q Consensus 219 ~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~-~~~~~~~~~~Gan~~~~~~~~~~~~~~~~~~~~~~i~~~G~~p~~~ 297 (320)
.++.+...++ +...|.....++. .++. ++.-.....+|++.+.+|+.+.... ++.+..+-+.++|-.|.-|
T Consensus 197 ~~dl~~~~~l----~~~v~~~~pvVae--gGI~t~edv~~l~~~GadgvlVGsal~~a~--dp~~~~~~l~~~~~~~~~~ 268 (272)
T 3qja_A 197 DVDRDCFARI----APGLPSSVIRIAE--SGVRGTADLLAYAGAGADAVLVGEGLVTSG--DPRAAVADLVTAGTHPSCP 268 (272)
T ss_dssp CBCTTHHHHH----GGGSCTTSEEEEE--SCCCSHHHHHHHHHTTCSEEEECHHHHTCS--CHHHHHHHHHTTTTCSCCC
T ss_pred ccCHHHHHHH----HHhCcccCEEEEE--CCCCCHHHHHHHHHcCCCEEEEcHHHhCCC--CHHHHHHHHHhhhcCCcCC
Confidence 1222322222 2234432222222 1233 3333556778999999998666443 6888888888888777655
Q ss_pred C
Q 020848 298 S 298 (320)
Q Consensus 298 ~ 298 (320)
+
T Consensus 269 ~ 269 (272)
T 3qja_A 269 K 269 (272)
T ss_dssp C
T ss_pred c
Confidence 3
No 28
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=97.15 E-value=0.029 Score=47.30 Aligned_cols=205 Identities=16% Similarity=0.120 Sum_probs=114.4
Q ss_pred HHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHhccCeeccCcc
Q 020848 59 DAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLD 137 (320)
Q Consensus 59 eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~le 137 (320)
++..+.++.+.+.|++.+.+...... + .......+.++.++ ..++++..+.+..+.+.++.+.++|+|.|.++-.
T Consensus 33 ~~~~~~a~~~~~~G~d~i~v~~~~~~--~--~~~~~~~~~i~~i~~~~~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~~ 108 (253)
T 1h5y_A 33 GDPVEMAVRYEEEGADEIAILDITAA--P--EGRATFIDSVKRVAEAVSIPVLVGGGVRSLEDATTLFRAGADKVSVNTA 108 (253)
T ss_dssp ECHHHHHHHHHHTTCSCEEEEECCCC--T--TTHHHHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHTCSEEEESHH
T ss_pred ccHHHHHHHHHHcCCCEEEEEeCCcc--c--cCCcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEEChH
Confidence 45666777778899998888642111 1 12334566677777 4578888888888999999999999999998743
Q ss_pred ccHHHHhhhCCCCCHHHHHHHHHHHHHcCC---eeeeeE-------EEEe-CC---CHHHHHHHHHHHhcCCCCCCeeee
Q 020848 138 TSREFYSKIITTRSYDERLETLKHVREAGI---NVCSGG-------IIGL-GE---AEEDRVGLLHTLATLPTHPESVPI 203 (320)
Q Consensus 138 t~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi---~v~~~~-------i~Gl-ge---t~ed~~~~l~~l~~l~~~~~~v~~ 203 (320)
.. . +.+...+.. +..|. .+.+++ .+-. +. +..+..+.++.+.+.| ++.+.+
T Consensus 109 ~~----~------~~~~~~~~~---~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~~G--~d~i~~ 173 (253)
T 1h5y_A 109 AV----R------NPQLVALLA---REFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEELG--AGEILL 173 (253)
T ss_dssp HH----H------CTHHHHHHH---HHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHHHT--CSEEEE
T ss_pred Hh----h------CcHHHHHHH---HHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHhCC--CCEEEE
Confidence 22 1 111112222 22332 222222 2212 21 1123445556667777 677777
Q ss_pred eeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccChhHHHHHHHcCCceEeeCCccccCCCCChhHH
Q 020848 204 NALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDAD 283 (320)
Q Consensus 204 ~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~~~~~~~~~~Gan~~~~~~~~~~~~~~~~~~~ 283 (320)
+...+ .|+. ..++.+. ++. .+... +..+-..+|-.. .+.-...+.+||+.++.|..+ .....+.++.
T Consensus 174 ~~~~~-~g~~----~~~~~~~-i~~---l~~~~-~~pvia~GGi~~--~~~~~~~~~~Ga~~v~vgsal-~~~~~~~~~~ 240 (253)
T 1h5y_A 174 TSIDR-DGTG----LGYDVEL-IRR---VADSV-RIPVIASGGAGR--VEHFYEAAAAGADAVLAASLF-HFRVLSIAQV 240 (253)
T ss_dssp EETTT-TTTC----SCCCHHH-HHH---HHHHC-SSCEEEESCCCS--HHHHHHHHHTTCSEEEESHHH-HTTSSCHHHH
T ss_pred ecccC-CCCc----CcCCHHH-HHH---HHHhc-CCCEEEeCCCCC--HHHHHHHHHcCCcHHHHHHHH-HcCCCCHHHH
Confidence 65433 1332 1123332 222 22223 222222332211 122244567899999999744 3444578999
Q ss_pred HHHHHHcCCCcC
Q 020848 284 QLMFKVLGLTPK 295 (320)
Q Consensus 284 ~~~i~~~G~~p~ 295 (320)
.+.+++.||.+.
T Consensus 241 ~~~l~~~g~~~~ 252 (253)
T 1h5y_A 241 KRYLKERGVEVR 252 (253)
T ss_dssp HHHHHHTTCBCC
T ss_pred HHHHHHcCCCCC
Confidence 999999999753
No 29
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=97.09 E-value=0.021 Score=48.36 Aligned_cols=197 Identities=14% Similarity=0.125 Sum_probs=103.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEE--ecccC---CCCCCchhHHHHHHHHHHhh-hcCceE--EEeCCCCCHHHHHHHHHh
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCM--GAAWR---DTIGRKTNFNQILEYVKDIR-DMGMEV--CCTLGMLEKHQAIELKKA 127 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l--~~g~~---~~~ge~~~~~~l~~~i~~~k-~~~~~i--~~~~g~l~~e~l~~L~~a 127 (320)
.+...+.++++.+.+.|++-+.+ ..|.. .+.| ..+++.++... +..+.+ .+++ ..+.++.+.++
T Consensus 37 aD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G-----~~~v~~lr~~~p~~~ldvHLmv~~---p~~~i~~~~~a 108 (246)
T 3inp_A 37 ADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFG-----PMVLKALRDYGITAGMDVHLMVKP---VDALIESFAKA 108 (246)
T ss_dssp SCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCC-----HHHHHHHHHHTCCSCEEEEEECSS---CHHHHHHHHHH
T ss_pred CChhhHHHHHHHHHHcCCCEEEEEecCCCcCcchhcC-----HHHHHHHHHhCCCCeEEEEEeeCC---HHHHHHHHHHc
Confidence 34556677777777788886555 33322 1223 34555555543 332333 2222 25689999999
Q ss_pred ccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeeeeee
Q 020848 128 GLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALL 207 (320)
Q Consensus 128 Gld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~~~ 207 (320)
|.|.+.+..|+.+ .. .+.++.+++.|+++++. +..+...+.+...+ .. ++.|-++.-.
T Consensus 109 GAd~itvH~Ea~~----------~~---~~~i~~ir~~G~k~Gva--lnp~Tp~e~l~~~l---~~----vD~VlvMsV~ 166 (246)
T 3inp_A 109 GATSIVFHPEASE----------HI---DRSLQLIKSFGIQAGLA--LNPATGIDCLKYVE---SN----IDRVLIMSVN 166 (246)
T ss_dssp TCSEEEECGGGCS----------CH---HHHHHHHHTTTSEEEEE--ECTTCCSGGGTTTG---GG----CSEEEEECSC
T ss_pred CCCEEEEccccch----------hH---HHHHHHHHHcCCeEEEE--ecCCCCHHHHHHHH---hc----CCEEEEeeec
Confidence 9999999887641 22 46667778889876554 32222322222222 11 4566555443
Q ss_pred ecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccChhHHHHHHHcCCceEeeCCccccCCCCChhHHHHHH
Q 020848 208 AVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMF 287 (320)
Q Consensus 208 p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~~~~~~~~~~Gan~~~~~~~~~~~~~~~~~~~~~~i 287 (320)
||..-+...+.+.+.+.++.+.....-.+..+.+.+| +.++.......+|||.++.|..+... .++.+.++.+
T Consensus 167 --PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGG---I~~~ti~~~~~aGAD~~V~GSaIf~a--~dp~~~i~~l 239 (246)
T 3inp_A 167 --PGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGG---VNPYNIAEIAVCGVNAFVAGSAIFNS--DSYKQTIDKM 239 (246)
T ss_dssp --TTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESS---CCTTTHHHHHTTTCCEEEESHHHHTS--SCHHHHHHHH
T ss_pred --CCCCCcccchHHHHHHHHHHHHHHhcCCCeeEEEECC---cCHHHHHHHHHcCCCEEEEehHHhCC--CCHHHHHHHH
Confidence 3542222222223332222222221223344555543 33344467789999999999633322 3555655555
Q ss_pred HH
Q 020848 288 KV 289 (320)
Q Consensus 288 ~~ 289 (320)
++
T Consensus 240 ~~ 241 (246)
T 3inp_A 240 RD 241 (246)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 30
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=97.05 E-value=0.048 Score=53.33 Aligned_cols=215 Identities=11% Similarity=0.027 Sum_probs=136.5
Q ss_pred CCHHHHHHHHHHHHHc--CCCEEEEecccC-----CCCCCchhHHHHHHHHHHhhhcCceEEEeC----CC--C----CH
Q 020848 56 MTKDAVMQAAQKAKEA--GSTRFCMGAAWR-----DTIGRKTNFNQILEYVKDIRDMGMEVCCTL----GM--L----EK 118 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~--g~~~i~l~~g~~-----~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~----g~--l----~~ 118 (320)
++.++.++.++.+.+. |+..|-.+||.. +..++ ..++.+.++.+.+++..+..+... |. + ..
T Consensus 122 ~~~edkl~Ia~~Ld~~Gvg~~~IE~gGGatfd~~~~f~~e-~p~e~l~~l~~~~~~~~l~~l~R~~n~vgy~~~p~~~~~ 200 (718)
T 3bg3_A 122 VRTHDLKKIAPYVAHNFSKLFSMENWGGATFDVAMRFLYE-CPWRRLQELRELIPNIPFQMLLRGANAVGYTNYPDNVVF 200 (718)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHTSCC-CHHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEecCCcchhhccccCCC-CHHHHHHHHHHHcccchHHHHhcccccccccccCCcchH
Confidence 8899999999999887 576787764432 12222 344555555555554334333321 21 1 35
Q ss_pred HHHHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEE---e-----CCCHHHHHHHHHH
Q 020848 119 HQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIG---L-----GEAEEDRVGLLHT 190 (320)
Q Consensus 119 e~l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~G---l-----get~ed~~~~l~~ 190 (320)
+.++...++|++.+.+..-. .+.+.....++.+++.|..+...+.+. . ..+.+.+.+.++.
T Consensus 201 ~~i~~a~~~Gvd~irIf~s~-----------n~l~~l~~~i~~ak~~G~~v~~~i~~~~d~~dp~r~~~~~e~~~~~a~~ 269 (718)
T 3bg3_A 201 KFCEVAKENGMDVFRVFDSL-----------NYLPNMLLGMEAAGSAGGVVEAAISYTGDVADPSRTKYSLQYYMGLAEE 269 (718)
T ss_dssp HHHHHHHHHTCCEEEEECSS-----------CCHHHHHHHHHHHHTTTSEEEEEEECCSCTTCTTCCTTCHHHHHHHHHH
T ss_pred HHHHHHHhcCcCEEEEEecH-----------HHHHHHHHHHHHHHHcCCeEEEEEEeeccccCCCCCCCCHHHHHHHHHH
Confidence 77889999999998775311 245677888999999998777666554 1 1267888999999
Q ss_pred HhcCCCCCCeeeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCc-ccccChhHHHHHHHcCCceEeeC
Q 020848 191 LATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAG-RVRFSMPEQALCFLAGANSIFTG 269 (320)
Q Consensus 191 l~~l~~~~~~v~~~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g-~~~~~~~~~~~~~~~Gan~~~~~ 269 (320)
+.+.| ++.|.+ ++|. ....+.++.+++...+..+|+..+.+-+- ..++.-.....++.+||+.+-..
T Consensus 270 l~~~G--a~~I~l------~DT~----G~~~P~~v~~lV~~lk~~~p~~~I~~H~Hnd~GlAvANslaAveAGa~~VD~t 337 (718)
T 3bg3_A 270 LVRAG--THILCI------KDMA----GLLKPTACTMLVSSLRDRFPDLPLHIHTHDTSGAGVAAMLACAQAGADVVDVA 337 (718)
T ss_dssp HHHHT--CSEEEE------ECTT----SCCCHHHHHHHHHHHHHHSTTCCEEEECCCTTSCHHHHHHHHHHTTCSEEEEB
T ss_pred HHHcC--CCEEEE------cCcC----CCcCHHHHHHHHHHHHHhCCCCeEEEEECCCccHHHHHHHHHHHhCCCEEEec
Confidence 99998 554443 2332 23568888899988888887544433110 01222223467889999987221
Q ss_pred -Ccc-ccCCCCChhHHHHHHHHcCCCc
Q 020848 270 -EKL-LTTPNNDFDADQLMFKVLGLTP 294 (320)
Q Consensus 270 -~~~-~~~~~~~~~~~~~~i~~~G~~p 294 (320)
.++ ..++..+.++++.+++..|+.+
T Consensus 338 i~GlGertGN~~lE~vv~~L~~~g~~t 364 (718)
T 3bg3_A 338 ADSMSGMTSQPSMGALVACTRGTPLDT 364 (718)
T ss_dssp CGGGCSTTSCCBHHHHHHHHTTSTTCC
T ss_pred CcccccccCchhHHHHHHHHHhcCCCc
Confidence 001 1356678899999998887764
No 31
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=96.45 E-value=0.29 Score=41.26 Aligned_cols=205 Identities=13% Similarity=0.082 Sum_probs=110.1
Q ss_pred HHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHhccCeeccCcccc
Q 020848 61 VMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTS 139 (320)
Q Consensus 61 i~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~let~ 139 (320)
..+.++.+.+.|++.+.+...... + .......+.++.++ ..++++....|..+.+.++.+.++|+|.|.++-...
T Consensus 32 ~~~~a~~~~~~Gad~i~v~d~~~~--~--~~~~~~~~~i~~i~~~~~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~~l 107 (253)
T 1thf_D 32 PVELGKFYSEIGIDELVFLDITAS--V--EKRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVSINTAAV 107 (253)
T ss_dssp HHHHHHHHHHTTCCEEEEEESSCS--S--SHHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred HHHHHHHHHHcCCCEEEEECCchh--h--cCCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHH
Confidence 344456667789999888642211 1 13345567777777 457888888888899999999999999998875433
Q ss_pred HHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeE-------EEE-eCCCH---HHHHHHHHHHhcCCCCCCeeeeeeeee
Q 020848 140 REFYSKIITTRSYDERLETLKHVREAGINVCSGG-------IIG-LGEAE---EDRVGLLHTLATLPTHPESVPINALLA 208 (320)
Q Consensus 140 ~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~-------i~G-lget~---ed~~~~l~~l~~l~~~~~~v~~~~~~p 208 (320)
.. ++...+.++.+....+.+.++. .+- .+... .+..+.++.+.++| ++.+.+....+
T Consensus 108 ----~~------p~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G--~~~i~~~~~~~ 175 (253)
T 1thf_D 108 ----EN------PSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRG--AGEILLTSIDR 175 (253)
T ss_dssp ----HC------THHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTT--CSEEEEEETTT
T ss_pred ----hC------hHHHHHHHHHcCCCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHHHCC--CCEEEEEeccC
Confidence 11 1222233333221011122222 111 23211 12455556666676 55554433221
Q ss_pred cCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccC-hhHHHHHHHcCCceEeeCCccccCCCCChhHHHHHH
Q 020848 209 VKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFS-MPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMF 287 (320)
Q Consensus 209 ~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~-~~~~~~~~~~Gan~~~~~~~~~~~~~~~~~~~~~~i 287 (320)
.|+. ..++.+.+.+ .+... +..+-..+| +. .+.-...+.+||+.++.|..+.. ...++++..+.+
T Consensus 176 -~g~~----~g~~~~~~~~----l~~~~-~ipvia~GG---I~~~~d~~~~~~~Gadgv~vGsal~~-~~~~~~~~~~~l 241 (253)
T 1thf_D 176 -DGTK----SGYDTEMIRF----VRPLT-TLPIIASGG---AGKMEHFLEAFLAGADAALAASVFHF-REIDVRELKEYL 241 (253)
T ss_dssp -TTSC----SCCCHHHHHH----HGGGC-CSCEEEESC---CCSHHHHHHHHHTTCSEEEESHHHHT-TCSCHHHHHHHH
T ss_pred -CCCC----CCCCHHHHHH----HHHhc-CCCEEEECC---CCCHHHHHHHHHcCChHHHHHHHHHc-CCCCHHHHHHHH
Confidence 1221 1233332222 22222 212222222 22 13234456789999999975442 333799999999
Q ss_pred HHcCCCcC
Q 020848 288 KVLGLTPK 295 (320)
Q Consensus 288 ~~~G~~p~ 295 (320)
++.|+.+.
T Consensus 242 ~~~g~~~~ 249 (253)
T 1thf_D 242 KKHGVNVR 249 (253)
T ss_dssp HHTTCCCC
T ss_pred HHcCCccc
Confidence 99998654
No 32
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=96.45 E-value=0.066 Score=44.80 Aligned_cols=192 Identities=15% Similarity=0.162 Sum_probs=102.9
Q ss_pred CHHHHHHHHHHHHHcCCCEEEE--ecccC---CCCCCchhHHHHHHHHHHh--hhcCce--EEEeCCCCCHHHHHHHHHh
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCM--GAAWR---DTIGRKTNFNQILEYVKDI--RDMGME--VCCTLGMLEKHQAIELKKA 127 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l--~~g~~---~~~ge~~~~~~l~~~i~~~--k~~~~~--i~~~~g~l~~e~l~~L~~a 127 (320)
++..+.++++.+.+.|++.+++ ..|.. .+.| ..+++.++.. .+..+. +.+++- .+.++.+.++
T Consensus 15 D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G-----~~~v~~ir~~~~~~~~~dvhLmv~~p---~~~i~~~~~a 86 (228)
T 3ovp_A 15 DLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFG-----HPVVESLRKQLGQDPFFDMHMMVSKP---EQWVKPMAVA 86 (228)
T ss_dssp CGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCBCBC-----HHHHHHHHHHHCSSSCEEEEEECSCG---GGGHHHHHHH
T ss_pred CchhHHHHHHHHHHcCCCEEEEEecCCCcCcccccC-----HHHHHHHHHhhCCCCcEEEEEEeCCH---HHHHHHHHHc
Confidence 4455666777777788886655 33321 1223 3455555554 222222 333221 3578889999
Q ss_pred ccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeeeeee
Q 020848 128 GLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALL 207 (320)
Q Consensus 128 Gld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~~~ 207 (320)
|.|.+.+..|+. ... .+.++.+++.|+++++.+- .+...+.+...+ +. ++.|-+....
T Consensus 87 Gad~itvH~Ea~----------~~~---~~~i~~i~~~G~k~gval~--p~t~~e~l~~~l----~~---~D~Vl~msv~ 144 (228)
T 3ovp_A 87 GANQYTFHLEAT----------ENP---GALIKDIRENGMKVGLAIK--PGTSVEYLAPWA----NQ---IDMALVMTVE 144 (228)
T ss_dssp TCSEEEEEGGGC----------SCH---HHHHHHHHHTTCEEEEEEC--TTSCGGGTGGGG----GG---CSEEEEESSC
T ss_pred CCCEEEEccCCc----------hhH---HHHHHHHHHcCCCEEEEEc--CCCCHHHHHHHh----cc---CCeEEEeeec
Confidence 999999987663 122 4666777888987654422 232322222222 22 4556554443
Q ss_pred ecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccChhHHHHHHHcCCceEeeCCccccCCCCChhHHHHHH
Q 020848 208 AVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMF 287 (320)
Q Consensus 208 p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~~~~~~~~~~Gan~~~~~~~~~~~~~~~~~~~~~~i 287 (320)
||..-+...+.. +..+...|...++..+.+.+| +.++....+..+||+.++.|..+... .++.+.++.+
T Consensus 145 --pGf~Gq~f~~~~----l~ki~~lr~~~~~~~I~VdGG---I~~~t~~~~~~aGAd~~VvGsaIf~a--~dp~~~~~~l 213 (228)
T 3ovp_A 145 --PGFGGQKFMEDM----MPKVHWLRTQFPSLDIEVDGG---VGPDTVHKCAEAGANMIVSGSAIMRS--EDPRSVINLL 213 (228)
T ss_dssp --TTTCSCCCCGGG----HHHHHHHHHHCTTCEEEEESS---CSTTTHHHHHHHTCCEEEESHHHHTC--SCHHHHHHHH
T ss_pred --CCCCCcccCHHH----HHHHHHHHHhcCCCCEEEeCC---cCHHHHHHHHHcCCCEEEEeHHHhCC--CCHHHHHHHH
Confidence 354222111112 333444555666655666544 33344466788999999999643322 3455555554
Q ss_pred HH
Q 020848 288 KV 289 (320)
Q Consensus 288 ~~ 289 (320)
++
T Consensus 214 ~~ 215 (228)
T 3ovp_A 214 RN 215 (228)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 33
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=96.43 E-value=0.14 Score=42.82 Aligned_cols=196 Identities=12% Similarity=0.091 Sum_probs=97.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEE--ecccCCCCCCchhHHHHHHHHHHhhhcCce--EEEeCCCCCHHHHHHHHHhccCee
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCM--GAAWRDTIGRKTNFNQILEYVKDIRDMGME--VCCTLGMLEKHQAIELKKAGLTAY 132 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l--~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~--i~~~~g~l~~e~l~~L~~aGld~v 132 (320)
+.-.+.++++.+ +.|++.+.+ -.|...+. -..-..+++.++...+..+. +.+.+ ..+.++.+.++|.|.+
T Consensus 11 D~~~l~~~i~~~-~~gad~lHvDvmDG~fvpn--~t~G~~~v~~lr~~~~~~~dvhLmv~d---p~~~i~~~~~aGAd~i 84 (231)
T 3ctl_A 11 DLLKFKEQIEFI-DSHADYFHIDIMDGHFVPN--LTLSPFFVSQVKKLATKPLDCHLMVTR---PQDYIAQLARAGADFI 84 (231)
T ss_dssp CGGGHHHHHHHH-HTTCSCEEEEEECSSSSSC--CCBCHHHHHHHHTTCCSCEEEEEESSC---GGGTHHHHHHHTCSEE
T ss_pred ChhhHHHHHHHH-HcCCCEEEEEEEeCccCcc--chhcHHHHHHHHhccCCcEEEEEEecC---HHHHHHHHHHcCCCEE
Confidence 344555666666 788876544 33321111 01112344433332212222 23322 2446899999999999
Q ss_pred ccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeeeeeeecCCC
Q 020848 133 NHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGT 212 (320)
Q Consensus 133 ~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~~~p~~gt 212 (320)
.+..|+. . .+. .+.++.+++.|+++++.+ ..+...+.+...+ + + ++.|-++...| |+
T Consensus 85 tvh~Ea~-------~--~~~---~~~i~~i~~~G~k~gv~l--np~tp~~~~~~~l----~-~--~D~VlvmsV~p--Gf 141 (231)
T 3ctl_A 85 TLHPETI-------N--GQA---FRLIDEIRRHDMKVGLIL--NPETPVEAMKYYI----H-K--ADKITVMTVDP--GF 141 (231)
T ss_dssp EECGGGC-------T--TTH---HHHHHHHHHTTCEEEEEE--CTTCCGGGGTTTG----G-G--CSEEEEESSCT--TC
T ss_pred EECcccC-------C--ccH---HHHHHHHHHcCCeEEEEE--ECCCcHHHHHHHH----h-c--CCEEEEeeecc--Cc
Confidence 9987662 0 112 466788888998876544 2232222222222 1 1 56676666655 43
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhCC----CceeecCCcccccChhHHHHHHHcCCceEeeC-CccccCCCCChhHHHHHH
Q 020848 213 PLQDQKPVEIWEMIRMIATARIVMP----KAMVRLSAGRVRFSMPEQALCFLAGANSIFTG-EKLLTTPNNDFDADQLMF 287 (320)
Q Consensus 213 ~~~~~~~~~~~e~~~~~a~~R~~~p----~~~i~~~~g~~~~~~~~~~~~~~~Gan~~~~~-~~~~~~~~~~~~~~~~~i 287 (320)
.-+...+ +. +..+...|.+.+ +..+.+.+| +.++.......+||+.++.| ..+...... +.+.++.+
T Consensus 142 ggQ~f~~-~~---l~kI~~lr~~~~~~~~~~~I~VdGG---I~~~~~~~~~~aGAd~~V~G~saif~~~d~-~~~~~~~l 213 (231)
T 3ctl_A 142 AGQPFIP-EM---LDKLAELKAWREREGLEYEIEVDGS---CNQATYEKLMAAGADVFIVGTSGLFNHAEN-IDEAWRIM 213 (231)
T ss_dssp SSCCCCT-TH---HHHHHHHHHHHHHHTCCCEEEEESC---CSTTTHHHHHHHTCCEEEECTTTTGGGCSS-HHHHHHHH
T ss_pred CCccccH-HH---HHHHHHHHHHHhccCCCceEEEECC---cCHHHHHHHHHcCCCEEEEccHHHhCCCCc-HHHHHHHH
Confidence 3112222 22 222333333332 334444433 33344466788999999999 744432221 55555555
Q ss_pred HH
Q 020848 288 KV 289 (320)
Q Consensus 288 ~~ 289 (320)
++
T Consensus 214 ~~ 215 (231)
T 3ctl_A 214 TA 215 (231)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 34
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=96.26 E-value=0.056 Score=48.60 Aligned_cols=77 Identities=16% Similarity=0.144 Sum_probs=53.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCCCCCC-chhHHHHHHHHHHhhhcCceEE--EeCCCCC-----HHHHHHHHHhc
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGR-KTNFNQILEYVKDIRDMGMEVC--CTLGMLE-----KHQAIELKKAG 128 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge-~~~~~~l~~~i~~~k~~~~~i~--~~~g~l~-----~e~l~~L~~aG 128 (320)
+.++..+.++.+.+.|+++|+-+- ..+.+. ....+.+-++++.+++.|+++. +++..+. .+.++.|++.|
T Consensus 39 ~~~~~~~Yi~~a~~~Gf~~IFTSL--~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DVsp~~~~~Lg~s~~dl~~f~~lG 116 (385)
T 1x7f_A 39 TKEKDMAYISAAARHGFSRIFTCL--LSVNRPKEEIVAEFKEIINHAKDNNMEVILDVAPAVFDQLGISYSDLSFFAELG 116 (385)
T ss_dssp CHHHHHHHHHHHHTTTEEEEEEEE--CCC--------HHHHHHHHHHHHTTCEEEEEECTTCC------CCCTHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCEEEccC--CccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHcCCCHHHHHHHHHcC
Confidence 567888889999999998886432 222222 2456888899999999999854 5665543 36788999999
Q ss_pred cCeeccC
Q 020848 129 LTAYNHN 135 (320)
Q Consensus 129 ld~v~i~ 135 (320)
++.+.++
T Consensus 117 i~gLRLD 123 (385)
T 1x7f_A 117 ADGIRLD 123 (385)
T ss_dssp CSEEEES
T ss_pred CCEEEEc
Confidence 9988875
No 35
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=95.76 E-value=0.55 Score=39.48 Aligned_cols=206 Identities=13% Similarity=0.075 Sum_probs=108.8
Q ss_pred HHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHhccCeeccCccc
Q 020848 60 AVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDT 138 (320)
Q Consensus 60 ei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~let 138 (320)
+..+.++.+.+.|++.+.+..... .+ .......+.++.++ ..++++....|..+.+.++.+.++|+|.+.++-..
T Consensus 32 d~~~~a~~~~~~Gad~i~v~d~~~--~~--~~~~~~~~~i~~i~~~~~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~ 107 (252)
T 1ka9_F 32 DPVEAARAYDEAGADELVFLDISA--TH--EERAILLDVVARVAERVFIPLTVGGGVRSLEDARKLLLSGADKVSVNSAA 107 (252)
T ss_dssp CHHHHHHHHHHHTCSCEEEEECCS--ST--TCHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHHTCSEEEECHHH
T ss_pred CHHHHHHHHHHcCCCEEEEEcCCc--cc--cCccccHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEChHH
Confidence 344555666778999888864221 11 12344567777777 45788888888899999999999999999887533
Q ss_pred cHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeE-------EEE-eCCCH---HHHHHHHHHHhcCCCCCCeeeeeeee
Q 020848 139 SREFYSKIITTRSYDERLETLKHVREAGINVCSGG-------IIG-LGEAE---EDRVGLLHTLATLPTHPESVPINALL 207 (320)
Q Consensus 139 ~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~-------i~G-lget~---ed~~~~l~~l~~l~~~~~~v~~~~~~ 207 (320)
. .. .+...+..+......+.+.+++ .+- .+... .+..+.++.+.++| +..+.+....
T Consensus 108 l----~~------p~~~~~~~~~~~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G--~~~i~~~~~~ 175 (252)
T 1ka9_F 108 V----RR------PELIRELADHFGAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVELG--AGEILLTSMD 175 (252)
T ss_dssp H----HC------THHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHHT--CCEEEEEETT
T ss_pred H----hC------cHHHHHHHHHcCCCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHHcC--CCEEEEeccc
Confidence 2 11 1112222222211112233332 121 22211 12344455555666 4444333211
Q ss_pred ecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccC-hhHHHHHHHcCCceEeeCCccccCCCCChhHHHHH
Q 020848 208 AVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFS-MPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLM 286 (320)
Q Consensus 208 p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~-~~~~~~~~~~Gan~~~~~~~~~~~~~~~~~~~~~~ 286 (320)
..|+. ..++.+. ++..+...+-+.+ ..+ ++. ++.-...+..|++.++.|..+. ....++.+..+.
T Consensus 176 -~~g~~----~g~~~~~----i~~l~~~~~ipvi-a~G---GI~~~~d~~~~~~~Gadgv~vgsal~-~~~~~~~~~~~~ 241 (252)
T 1ka9_F 176 -RDGTK----EGYDLRL----TRMVAEAVGVPVI-ASG---GAGRMEHFLEAFQAGAEAALAASVFH-FGEIPIPKLKRY 241 (252)
T ss_dssp -TTTTC----SCCCHHH----HHHHHHHCSSCEE-EES---CCCSHHHHHHHHHTTCSEEEESHHHH-TTSSCHHHHHHH
T ss_pred -CCCCc----CCCCHHH----HHHHHHHcCCCEE-EeC---CCCCHHHHHHHHHCCCHHHHHHHHHH-cCCCCHHHHHHH
Confidence 11222 1233332 2222223322222 222 222 1222345567999999987443 344579999999
Q ss_pred HHHcCCCcC
Q 020848 287 FKVLGLTPK 295 (320)
Q Consensus 287 i~~~G~~p~ 295 (320)
+.+.|+.+.
T Consensus 242 l~~~~~~~~ 250 (252)
T 1ka9_F 242 LAEKGVHVR 250 (252)
T ss_dssp HHHTTCCBC
T ss_pred HHHCCCCcC
Confidence 999998653
No 36
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=95.70 E-value=0.54 Score=41.06 Aligned_cols=76 Identities=12% Similarity=0.229 Sum_probs=53.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCC--------chhHHHHHHHHHHhhh-cCceEEEeCCCCCHHHHHHHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGR--------KTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKK 126 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge--------~~~~~~l~~~i~~~k~-~~~~i~~~~g~l~~e~l~~L~~ 126 (320)
.+++++++.++.+.+.|++-|-+++-..-++.+ ...++++...|+.+++ .++.+++ .....+.++.-.+
T Consensus 46 ~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpISI--DT~~~~Va~aAl~ 123 (314)
T 3tr9_A 46 LDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLISV--DTSRPRVMREAVN 123 (314)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCCSEEEE--ECSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCCCeEEE--eCCCHHHHHHHHH
Confidence 689999999999999999988887633333322 1334557777888774 3665544 4466788888888
Q ss_pred hccCeec
Q 020848 127 AGLTAYN 133 (320)
Q Consensus 127 aGld~v~ 133 (320)
+|.+-|+
T Consensus 124 aGa~iIN 130 (314)
T 3tr9_A 124 TGADMIN 130 (314)
T ss_dssp HTCCEEE
T ss_pred cCCCEEE
Confidence 8887664
No 37
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=95.58 E-value=0.32 Score=41.89 Aligned_cols=77 Identities=14% Similarity=0.180 Sum_probs=50.9
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecccCCCC----CCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccC
Q 020848 55 LMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTI----GRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLT 130 (320)
Q Consensus 55 ~~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~----ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld 130 (320)
+.+++++++.++...+.|.+-|-+++-.+-++ .+...++.+...++.+++.++.+++ .....+.++.-.++|.+
T Consensus 25 ~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~~~piSI--DT~~~~va~aAl~aGa~ 102 (280)
T 1eye_A 25 YLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQGITVSI--DTMRADVARAALQNGAQ 102 (280)
T ss_dssp CCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHTTCCEEE--ECSCHHHHHHHHHTTCC
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEE--eCCCHHHHHHHHHcCCC
Confidence 37899999999999999999998876322222 1234567788888888754655443 34567777777777876
Q ss_pred eec
Q 020848 131 AYN 133 (320)
Q Consensus 131 ~v~ 133 (320)
-|+
T Consensus 103 iIN 105 (280)
T 1eye_A 103 MVN 105 (280)
T ss_dssp EEE
T ss_pred EEE
Confidence 664
No 38
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=95.47 E-value=0.31 Score=42.83 Aligned_cols=209 Identities=10% Similarity=0.024 Sum_probs=113.3
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecccCC---CCCCchhH-HHHHHHHHHhhhcCceEEEeCCCCCHHHHHHH---HHh
Q 020848 55 LMTKDAVMQAAQKAKEAGSTRFCMGAAWRD---TIGRKTNF-NQILEYVKDIRDMGMEVCCTLGMLEKHQAIEL---KKA 127 (320)
Q Consensus 55 ~~s~eei~~~~~~~~~~g~~~i~l~~g~~~---~~ge~~~~-~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L---~~a 127 (320)
.++.++.++.++.+.+.|++.|-++....+ ..+.|... .+.++.++..+...+.+++.+.....+.++.+ .++
T Consensus 20 ~~~~~~k~~ia~~L~~aGv~~IEvg~~~~p~~~f~~~~~~~~~e~l~~i~~~~~~~~~~L~r~~~~~~~dv~~~~~a~~~ 99 (320)
T 3dxi_A 20 DFNSKIVDAYILAMNELPIDYLEVGYRNKPSKEYMGKFGYTPVSVLKHLRNISTKKIAIMLNEKNTTPEDLNHLLLPIIG 99 (320)
T ss_dssp CCCHHHHHHHHHHHHTTTCCEEEEEECCSCCSSCCCHHHHCCHHHHHHHHHHCCSEEEEEEEGGGCCGGGHHHHHGGGTT
T ss_pred cCCHHHHHHHHHHHHHhCCCEEEEecccCCccccccccccChHHHHHHHhhccCCeEEEEecCCCCChhhHHHHHHhhhc
Confidence 389999999999999999999888743211 00111111 22333333332222334443322223345555 346
Q ss_pred ccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCC-CHHHHHHHHHHHhcCCCCCCeeeeeee
Q 020848 128 GLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGE-AEEDRVGLLHTLATLPTHPESVPINAL 206 (320)
Q Consensus 128 Gld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glge-t~ed~~~~l~~l~~l~~~~~~v~~~~~ 206 (320)
|+|.+.+..+ .++.+...+.++.+++.|+.+...+....+. +.++..+.+..+ +.| ++.+.+
T Consensus 100 Gvd~~ri~~~-----------~~nle~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~l~~~~~~-~~G--~~~i~l--- 162 (320)
T 3dxi_A 100 LVDMIRIAID-----------PQNIDRAIVLAKAIKTMGFEVGFNVMYMSKWAEMNGFLSKLKAI-DKI--ADLFCM--- 162 (320)
T ss_dssp TCSEEEEEEC-----------GGGHHHHHHHHHHHHTTTCEEEEEECCTTTGGGSTTSGGGGGGG-TTT--CSEEEE---
T ss_pred CCCEEEEEec-----------HHHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCCHHHHHHHHHHh-hCC--CCEEEE---
Confidence 7887776531 1247888899999999999987766552221 111222222211 234 443332
Q ss_pred eecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCC-cccccChhHHHHHHHcCCceEee---CCccccCCCCChhH
Q 020848 207 LAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSA-GRVRFSMPEQALCFLAGANSIFT---GEKLLTTPNNDFDA 282 (320)
Q Consensus 207 ~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~-g~~~~~~~~~~~~~~~Gan~~~~---~~~~~~~~~~~~~~ 282 (320)
++|. ....+.++.+++...+..++- .+.+-+ ...++.......++.+|++.+-. |-+ ..++..+.++
T Consensus 163 ---~Dt~----G~~~P~~~~~lv~~l~~~~~~-~i~~H~Hn~~G~a~an~laA~~aGa~~vd~si~GlG-~~~GN~~~E~ 233 (320)
T 3dxi_A 163 ---VDSF----GGITPKEVKNLLKEVRKYTHV-PVGFHGHDNLQLGLINSITAIDDGIDFIDATITGMG-RGAGNLKMEL 233 (320)
T ss_dssp ---ECTT----SCCCHHHHHHHHHHHHHHCCS-CEEEECBCTTSCHHHHHHHHHHTTCSEEEEBGGGCS-STTCBCBHHH
T ss_pred ---Cccc----CCCCHHHHHHHHHHHHHhCCC-eEEEEeCCCCccHHHHHHHHHHhCCCEEEEeccccC-CcccchhHHH
Confidence 2332 224677888888877777652 222110 00122222345688999998722 210 1245577888
Q ss_pred HHHHHHH
Q 020848 283 DQLMFKV 289 (320)
Q Consensus 283 ~~~~i~~ 289 (320)
++.+++.
T Consensus 234 lv~~L~~ 240 (320)
T 3dxi_A 234 LLTYLNK 240 (320)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8888887
No 39
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=95.34 E-value=1.2 Score=38.17 Aligned_cols=172 Identities=12% Similarity=0.078 Sum_probs=99.9
Q ss_pred HHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHhccCeeccCccccH
Q 020848 62 MQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTSR 140 (320)
Q Consensus 62 ~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~let~~ 140 (320)
.+.++.+.+.|+..+.+.+-..-..| ..+++ +.++ ..++++.......++.++.+.+.+|.|.|.+.....
T Consensus 82 ~~~A~~y~~~GA~~IsVltd~~~f~G---s~~~L----~~ir~~v~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L- 153 (272)
T 3tsm_A 82 PALAKAYEEGGAACLSVLTDTPSFQG---APEFL----TAARQACSLPALRKDFLFDPYQVYEARSWGADCILIIMASV- 153 (272)
T ss_dssp HHHHHHHHHTTCSEEEEECCSTTTCC---CHHHH----HHHHHTSSSCEEEESCCCSTHHHHHHHHTTCSEEEEETTTS-
T ss_pred HHHHHHHHHCCCCEEEEeccccccCC---CHHHH----HHHHHhcCCCEEECCccCCHHHHHHHHHcCCCEEEEccccc-
Confidence 44455666789999987653222223 23333 3444 357887766677888899999999999998865332
Q ss_pred HHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeeeeeeecCCCCCCCCCCC
Q 020848 141 EFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPV 220 (320)
Q Consensus 141 ~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~~~p~~gt~~~~~~~~ 220 (320)
+.++..+.++.+++.|+.+-+. . .+.+|+ +.+.+++ ++.|+++.-. -+.+ .+
T Consensus 154 ----------~~~~l~~l~~~a~~lGl~~lve----v-h~~eEl----~~A~~~g--a~iIGinnr~---l~t~----~~ 205 (272)
T 3tsm_A 154 ----------DDDLAKELEDTAFALGMDALIE----V-HDEAEM----ERALKLS--SRLLGVNNRN---LRSF----EV 205 (272)
T ss_dssp ----------CHHHHHHHHHHHHHTTCEEEEE----E-CSHHHH----HHHTTSC--CSEEEEECBC---TTTC----CB
T ss_pred ----------CHHHHHHHHHHHHHcCCeEEEE----e-CCHHHH----HHHHhcC--CCEEEECCCC---CccC----CC
Confidence 3344556677788888764222 1 366664 3444677 7777776431 1111 23
Q ss_pred CHHHHHHHHHHHHHhCCCceeecCCccccc-ChhHHHHHHHcCCceEeeCCccccC
Q 020848 221 EIWEMIRMIATARIVMPKAMVRLSAGRVRF-SMPEQALCFLAGANSIFTGEKLLTT 275 (320)
Q Consensus 221 ~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~-~~~~~~~~~~~Gan~~~~~~~~~~~ 275 (320)
+.+...++. ...|...+.++.+ ++ .++.-.....+|++.+++|+.+...
T Consensus 206 dl~~~~~L~----~~ip~~~~vIaes--GI~t~edv~~l~~~Ga~gvLVG~almr~ 255 (272)
T 3tsm_A 206 NLAVSERLA----KMAPSDRLLVGES--GIFTHEDCLRLEKSGIGTFLIGESLMRQ 255 (272)
T ss_dssp CTHHHHHHH----HHSCTTSEEEEES--SCCSHHHHHHHHTTTCCEEEECHHHHTS
T ss_pred ChHHHHHHH----HhCCCCCcEEEEC--CCCCHHHHHHHHHcCCCEEEEcHHHcCC
Confidence 333323322 2355433333321 22 2343456677899999999866543
No 40
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=95.29 E-value=0.68 Score=39.86 Aligned_cols=138 Identities=15% Similarity=0.133 Sum_probs=82.8
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc----hhHHHHHHHHHHhhh-cCceEEEeCCCCCHHHHHHHHHhcc
Q 020848 55 LMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK----TNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAGL 129 (320)
Q Consensus 55 ~~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~----~~~~~l~~~i~~~k~-~~~~i~~~~g~l~~e~l~~L~~aGl 129 (320)
..+++++++.++...+.|++-|-+++.+.-++.++ ...+.+...++.+++ .++++++ .....+.++.-.++|.
T Consensus 34 ~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~piSI--DT~~~~va~aAl~aGa 111 (282)
T 1aj0_A 34 HNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISV--DTSKPEVIRESAKVGA 111 (282)
T ss_dssp CTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCCEEEE--ECCCHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCCeEEE--eCCCHHHHHHHHHcCC
Confidence 36899999999999999999999987333233222 345667777777774 3666544 3456777777777787
Q ss_pred Ceec-cCccccHHHHhh---hC--------C--CCC--------------HHHHHHHHHHHHHcCCe---eeeeEEEEeC
Q 020848 130 TAYN-HNLDTSREFYSK---II--------T--TRS--------------YDERLETLKHVREAGIN---VCSGGIIGLG 178 (320)
Q Consensus 130 d~v~-i~let~~~~~~~---i~--------~--~~~--------------~~~~l~~i~~a~~~Gi~---v~~~~i~Glg 178 (320)
+-|+ ++-...++.++. .. + +.+ .+...+.++.+.++|++ +-++--+|++
T Consensus 112 ~iINdvsg~~d~~~~~~~a~~~~~vVlmh~~G~p~tm~~~~~y~d~~~ev~~~l~~~i~~a~~~Gi~~~~IilDPg~gf~ 191 (282)
T 1aj0_A 112 HIINDIRSLSEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEKLLLDPGFGFG 191 (282)
T ss_dssp CEEEETTTTCSTTHHHHHHHHTCCEEEECCSSCTTCCSCCCCCSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSS
T ss_pred CEEEECCCCCCHHHHHHHHHhCCeEEEEccCCCCccccccCccchHHHHHHHHHHHHHHHHHHcCCChhhEEEeCCCCcc
Confidence 7664 222111221111 00 0 011 34445566667777875 6666666666
Q ss_pred CCHHHHHHHHHHHhcC
Q 020848 179 EAEEDRVGLLHTLATL 194 (320)
Q Consensus 179 et~ed~~~~l~~l~~l 194 (320)
.+.++-.++++.+..+
T Consensus 192 k~~~~n~~ll~~l~~~ 207 (282)
T 1aj0_A 192 KNLSHNYSLLARLAEF 207 (282)
T ss_dssp CCHHHHHHHHHTGGGG
T ss_pred cCHHHHHHHHHHHHHH
Confidence 6766666666555544
No 41
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=95.17 E-value=0.43 Score=40.64 Aligned_cols=135 Identities=13% Similarity=0.202 Sum_probs=81.4
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc----hhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccC
Q 020848 55 LMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK----TNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLT 130 (320)
Q Consensus 55 ~~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~----~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld 130 (320)
+.+.+.+++.++.+.+.|++-|-++|-.+-++.++ .-++++...++.+++.++.+++ .....+.++.-.++|.+
T Consensus 26 ~~~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~~~v~iSI--DT~~~~Va~~al~aGa~ 103 (270)
T 4hb7_A 26 FNNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVGFDVKISV--DTFRSEVAEACLKLGVD 103 (270)
T ss_dssp -CHHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTTSSSEEEE--ECSCHHHHHHHHHHTCC
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhcCCCeEEE--ECCCHHHHHHHHHhccc
Confidence 36889999999999999999888877544444333 3456677888888765555443 44667888888888888
Q ss_pred eec-cCcccc-HHHHhhhC-----------CC----CC-----HHHHHHHHHHHHHcCCe---eeeeEEEEeCCCHHHHH
Q 020848 131 AYN-HNLDTS-REFYSKII-----------TT----RS-----YDERLETLKHVREAGIN---VCSGGIIGLGEAEEDRV 185 (320)
Q Consensus 131 ~v~-i~let~-~~~~~~i~-----------~~----~~-----~~~~l~~i~~a~~~Gi~---v~~~~i~Glget~ed~~ 185 (320)
-|+ ++--.. ++.++.+. ++ .+ .+...+.++.+.++|++ +-++-=+|+|-+.++=.
T Consensus 104 iINDVs~g~~d~~m~~~va~~~~~~vlMH~~~~p~~~~vv~ev~~~l~~~i~~a~~aGI~~~~IilDPGiGFgKt~~~N~ 183 (270)
T 4hb7_A 104 MINDQWAGLYDHRMFQIVAKYDAEIILMHNGNGNRDEPVVEEMLTSLLAQAHQAKIAGIPSNKIWLDPGIGFAKTRNEEA 183 (270)
T ss_dssp EEEETTTTSSCTHHHHHHHHTTCEEEEECCCSSCCSSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHH
T ss_pred eeccccccccchhHHHHHHHcCCCeEEeccccCCccccchhHHHHHHHHHHHHHHHcCCCCceEEEeCCCCcccccccHH
Confidence 776 321111 22222111 00 01 12233445667777874 55555556677776655
Q ss_pred HHHHHH
Q 020848 186 GLLHTL 191 (320)
Q Consensus 186 ~~l~~l 191 (320)
++++.+
T Consensus 184 ~ll~~l 189 (270)
T 4hb7_A 184 EVMARL 189 (270)
T ss_dssp HHHTCH
T ss_pred HHHhhH
Confidence 554433
No 42
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=95.11 E-value=1.3 Score=46.02 Aligned_cols=214 Identities=8% Similarity=-0.030 Sum_probs=127.7
Q ss_pred CCHHHHHHHHHHHHHcC--CCEEEEecccCCC-----CCCchhHHHHHHHHHHhhhcCceEEEeC----CC------CCH
Q 020848 56 MTKDAVMQAAQKAKEAG--STRFCMGAAWRDT-----IGRKTNFNQILEYVKDIRDMGMEVCCTL----GM------LEK 118 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g--~~~i~l~~g~~~~-----~ge~~~~~~l~~~i~~~k~~~~~i~~~~----g~------l~~ 118 (320)
++.++.++.++.+.+.| +..+-+.||...+ .+ ...++.+.++.+.+++..+...... |. ..+
T Consensus 570 ~~~~dkl~ia~~L~~~gv~~~~iE~~gga~f~~~~~f~~-~~p~e~l~~~~~~~~~~~~~~l~R~~n~vg~~~~~~~~~~ 648 (1165)
T 2qf7_A 570 MRTYDIARIAGTYSHALPNLLSLECWGGATFDVSMRFLT-EDPWERLALIREGAPNLLLQMLLRGANGVGYTNYPDNVVK 648 (1165)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHHHC-CCHHHHHHHHHHHCTTSEEEEEEETTTBTCSSCCCHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCceEEEeCCCCccHHHHhhcC-CCHHHHHHHHHHHchhhHHHHHhccccccccccCCchhHH
Confidence 89999999999999985 5556654332110 01 1234445555555543323333221 22 134
Q ss_pred HHHHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEe--C------CCHHHHHHHHHH
Q 020848 119 HQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL--G------EAEEDRVGLLHT 190 (320)
Q Consensus 119 e~l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl--g------et~ed~~~~l~~ 190 (320)
+.++...++|+|.+.+.. +. .+.+.....++.+++.|..+...+.+.. . .+.+.+.++++.
T Consensus 649 ~~i~~a~~~g~d~irif~-sl----------~~~~~~~~~i~~~~~~g~~v~~~i~~~~~~~d~~r~~~~~~~~~~~~~~ 717 (1165)
T 2qf7_A 649 YFVRQAAKGGIDLFRVFD-CL----------NWVENMRVSMDAIAEENKLCEAAICYTGDILNSARPKYDLKYYTNLAVE 717 (1165)
T ss_dssp HHHHHHHHHTCCEEEEEC-TT----------CCGGGGHHHHHHHHHTTCEEEEEEECCSCTTCTTSGGGCHHHHHHHHHH
T ss_pred HHHHHHHhcCcCEEEEEe-eH----------HHHHHHHHHHHHHHhccceEEEEEEEeccccCCCCCCCCHHHHHHHHHH
Confidence 678899999999987742 11 2345567888999999977766655431 1 367778999999
Q ss_pred HhcCCCCCCeeeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCC-cccccChhHHHHHHHcCCceEeeC
Q 020848 191 LATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSA-GRVRFSMPEQALCFLAGANSIFTG 269 (320)
Q Consensus 191 l~~l~~~~~~v~~~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~-g~~~~~~~~~~~~~~~Gan~~~~~ 269 (320)
+.+.| ++.|.+ ++|. ....+.++.+++...+..+ +..+.+-+ ...++.-.....++.+||+.+-.-
T Consensus 718 ~~~~G--a~~i~l------~DT~----G~~~P~~~~~lv~~l~~~~-~~~i~~H~Hnd~GlAvAn~laAv~aGa~~vd~t 784 (1165)
T 2qf7_A 718 LEKAG--AHIIAV------KDMA----GLLKPAAAKVLFKALREAT-GLPIHFHTHDTSGIAAATVLAAVEAGVDAVDAA 784 (1165)
T ss_dssp HHHTT--CSEEEE------EETT----CCCCHHHHHHHHHHHHHHC-SSCEEEEECBTTSCHHHHHHHHHHTTCSEEEEB
T ss_pred HHHcC--CCEEEE------eCcc----CCcCHHHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHhCCCEEEec
Confidence 99998 655443 2332 2355788888888777665 22222210 001121223467889999987221
Q ss_pred -Cccc-cCCCCChhHHHHHHHHcCCCc
Q 020848 270 -EKLL-TTPNNDFDADQLMFKVLGLTP 294 (320)
Q Consensus 270 -~~~~-~~~~~~~~~~~~~i~~~G~~p 294 (320)
.++- .++..+.++++.+++..|+.+
T Consensus 785 i~GlGe~~Gn~~le~vv~~L~~~g~~t 811 (1165)
T 2qf7_A 785 MDALSGNTSQPCLGSIVEALSGSERDP 811 (1165)
T ss_dssp CGGGCSBTSCCBHHHHHHHHTTSTTCC
T ss_pred ccccCCCccchhHHHHHHHHHhcCCCc
Confidence 0011 245677888888888887664
No 43
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=94.86 E-value=0.97 Score=40.39 Aligned_cols=77 Identities=9% Similarity=0.026 Sum_probs=54.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc-hhHHHHHHHHHHhhhcCceEE--EeCCC-----CCHHHHHHHHHhc
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK-TNFNQILEYVKDIRDMGMEVC--CTLGM-----LEKHQAIELKKAG 128 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~-~~~~~l~~~i~~~k~~~~~i~--~~~g~-----l~~e~l~~L~~aG 128 (320)
+.++..+.++.+.+.|+++|+-+- +.+.+++ ...+.+-++++.+++.|+++. +++.. .+.+.++.|++.|
T Consensus 15 ~~~~~~~yi~~a~~~Gf~~IFTSL--~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DIsp~~l~~Lg~s~~dl~~~~~lG 92 (372)
T 2p0o_A 15 ITNDTIIYIKKMKALGFDGIFTSL--HIPEDDTSLYRQRLTDLGAIAKAEKMKIMVDISGEALKRAGFSFDELEPLIELG 92 (372)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEEE--CCC-----CHHHHHHHHHHHHHHHTCEEEEEECHHHHHTTTCBTTBCHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCEEEccC--CccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHcCCCHHHHHHHHHcC
Confidence 346777888999999999986532 2222222 466888899999999999854 34322 3557888999999
Q ss_pred cCeeccC
Q 020848 129 LTAYNHN 135 (320)
Q Consensus 129 ld~v~i~ 135 (320)
++.+.++
T Consensus 93 i~glRLD 99 (372)
T 2p0o_A 93 VTGLRMD 99 (372)
T ss_dssp CCEEEEC
T ss_pred CCEEEEc
Confidence 9988875
No 44
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=94.84 E-value=0.76 Score=37.45 Aligned_cols=191 Identities=16% Similarity=0.083 Sum_probs=101.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhc--CceEEEeCCCC-CHHH-HHHHHHhccCe
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTLGML-EKHQ-AIELKKAGLTA 131 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~--~~~i~~~~g~l-~~e~-l~~L~~aGld~ 131 (320)
.++++.++.++.+. .|++-+-++. |.....=.+.++.+++. +.++..+.... ..+. ++.+.++|+|.
T Consensus 10 ~~~~~~~~~~~~~~-~~~diie~G~--------p~~~~~g~~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~ 80 (211)
T 3f4w_A 10 LTLPEAMVFMDKVV-DDVDIIEVGT--------PFLIREGVNAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADY 80 (211)
T ss_dssp CCHHHHHHHHHHHG-GGCSEEEECH--------HHHHHHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSE
T ss_pred CCHHHHHHHHHHhh-cCccEEEeCc--------HHHHhccHHHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcCCCE
Confidence 56788888888764 4666554431 32234445667777743 56654443221 2344 89999999999
Q ss_pred eccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeeeeeeecCC
Q 020848 132 YNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKG 211 (320)
Q Consensus 132 v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~~~p~~g 211 (320)
+.+..... .+...+.++.+++.|+++.+.+ .+ .++. .+.++.+.+.| .+.+.+.+- ..|
T Consensus 81 v~v~~~~~------------~~~~~~~~~~~~~~g~~~~v~~-~~-~~t~---~~~~~~~~~~g--~d~i~v~~g--~~g 139 (211)
T 3f4w_A 81 VTVLGVTD------------VLTIQSCIRAAKEAGKQVVVDM-IC-VDDL---PARVRLLEEAG--ADMLAVHTG--TDQ 139 (211)
T ss_dssp EEEETTSC------------HHHHHHHHHHHHHHTCEEEEEC-TT-CSSH---HHHHHHHHHHT--CCEEEEECC--HHH
T ss_pred EEEeCCCC------------hhHHHHHHHHHHHcCCeEEEEe-cC-CCCH---HHHHHHHHHcC--CCEEEEcCC--Ccc
Confidence 98854322 2333556677778887754321 11 2333 34445556666 565544310 112
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccChhHHHHHHHcCCceEeeCCccccCCCCChhHHHHHHH
Q 020848 212 TPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFK 288 (320)
Q Consensus 212 t~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~~~~~~~~~~Gan~~~~~~~~~~~~~~~~~~~~~~i~ 288 (320)
..+ ++...+ .+...+...++..+.+.+|- .++.-...+.+||+.++.|..+... .++.+.++.++
T Consensus 140 ~~~---~~~~~~----~i~~l~~~~~~~~i~~~gGI---~~~~~~~~~~~Gad~vvvGsai~~~--~d~~~~~~~l~ 204 (211)
T 3f4w_A 140 QAA---GRKPID----DLITMLKVRRKARIAVAGGI---SSQTVKDYALLGPDVVIVGSAITHA--ADPAGEARKIS 204 (211)
T ss_dssp HHT---TCCSHH----HHHHHHHHCSSCEEEEESSC---CTTTHHHHHTTCCSEEEECHHHHTC--SSHHHHHHHHH
T ss_pred ccc---CCCCHH----HHHHHHHHcCCCcEEEECCC---CHHHHHHHHHcCCCEEEECHHHcCC--CCHHHHHHHHH
Confidence 221 111222 23334445555444444432 2333355678899999999744432 34444444443
No 45
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=94.82 E-value=0.31 Score=40.24 Aligned_cols=138 Identities=14% Similarity=0.150 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeCC------CCCHHHHHHHHHhccCe
Q 020848 58 KDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLG------MLEKHQAIELKKAGLTA 131 (320)
Q Consensus 58 ~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g------~l~~e~l~~L~~aGld~ 131 (320)
.+.+.+.++.+++.|++.|+|+-= ...| ....+.+.++++..+ ++++..+-. .-..+.++.|.+.|+++
T Consensus 75 ~~~M~~Di~~~~~~GadGvV~G~L--t~dg-~iD~~~~~~Li~~a~--~~~vTFHRAFD~~~~~d~~~ale~L~~lGv~r 149 (224)
T 2bdq_A 75 LRIMEEDILRAVELESDALVLGIL--TSNN-HIDTEAIEQLLPATQ--GLPLVFHMAFDVIPKSDQKKSIDQLVALGFTR 149 (224)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCB--CTTS-SBCHHHHHHHHHHHT--TCCEEECGGGGGSCTTTHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeeE--CCCC-CcCHHHHHHHHHHhC--CCeEEEECchhccCCcCHHHHHHHHHHcCCCE
Confidence 344555667788899999998642 1122 356677777777666 444433321 12266799999999999
Q ss_pred eccCccccHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeeeeeeecC
Q 020848 132 YNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVK 210 (320)
Q Consensus 132 v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~-~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~~~p~~ 210 (320)
|.-|=.. ...+..+-++.++.+.+ ++- .+.+|.|-|-+.+.+.++++. .| +..+......-.+
T Consensus 150 ILTSG~~---------~~~~a~~g~~~L~~Lv~~a~~--ri~Im~GgGV~~~Ni~~l~~~---tG--v~e~H~s~i~~~~ 213 (224)
T 2bdq_A 150 ILLHGSS---------NGEPIIENIKHIKALVEYANN--RIEIMVGGGVTAENYQYICQE---TG--VKQAHGTRITQMA 213 (224)
T ss_dssp EEECSCS---------SCCCGGGGHHHHHHHHHHHTT--SSEEEECSSCCTTTHHHHHHH---HT--CCEEEETTCC---
T ss_pred EECCCCC---------CCCcHHHHHHHHHHHHHhhCC--CeEEEeCCCCCHHHHHHHHHh---hC--CCEEccccccCCC
Confidence 8754111 01112222344444433 222 356788887777766665533 34 5566666666666
Q ss_pred CCCCCC
Q 020848 211 GTPLQD 216 (320)
Q Consensus 211 gt~~~~ 216 (320)
|.|++.
T Consensus 214 ~~~~~~ 219 (224)
T 2bdq_A 214 GDPLEH 219 (224)
T ss_dssp ------
T ss_pred CCcchh
Confidence 777754
No 46
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis inhibition, bromopyruvate, amino-acid biosynthesis; HET: FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A 3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Probab=94.78 E-value=1.8 Score=41.52 Aligned_cols=225 Identities=16% Similarity=0.081 Sum_probs=124.8
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhc-----CceE--EEeCCC-CCHHHHHHHH
Q 020848 54 KLMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM-----GMEV--CCTLGM-LEKHQAIELK 125 (320)
Q Consensus 54 ~~~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~-----~~~i--~~~~g~-l~~e~l~~L~ 125 (320)
..++.++-++.++.+.+.|++.|-.+. +... |..++ .++.+.+. +..+ ++.+.. .-+..++.|+
T Consensus 88 ~~~s~eeKl~Ia~~L~~lGVd~IEaGf---P~as-p~D~e----~v~~i~~~~l~~~~~~i~aL~r~~~~did~a~eal~ 159 (644)
T 3hq1_A 88 DPMSPARKRRMFDLLVRMGYKEIEVGF---PSAS-QTDFD----FVREIIEQGAIPDDVTIQVLTQCRPELIERTFQACS 159 (644)
T ss_dssp SCCCHHHHHHHHHHHHHHTCSEEEEEC---TTTC-HHHHH----HHHHHHHTTCSCTTCEEEEEEESCHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeC---CCCC-hhHHH----HHHHHHhcCCCCCCeEEEEEecCCHhhHHHHHHHHh
Confidence 448999999999999999999997754 2111 33333 33444322 3333 333221 1134456777
Q ss_pred HhccCeeccCccccHHHHhhhCCCCCHHHHHHH----HHHHHHcCC---eeeeeEEEEe----CCCHHHHHHHHHHHhcC
Q 020848 126 KAGLTAYNHNLDTSREFYSKIITTRSYDERLET----LKHVREAGI---NVCSGGIIGL----GEAEEDRVGLLHTLATL 194 (320)
Q Consensus 126 ~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~----i~~a~~~Gi---~v~~~~i~Gl----get~ed~~~~l~~l~~l 194 (320)
.+|.+.|.+.+-+.+ .+.+..-+.+.++.++. ++.+++.+- .+...+.++. .-+.+-+.+.++.+.+.
T Consensus 160 ~a~~~~Vhif~stSd-~h~~~~l~~s~eevle~~~~~v~~a~~~~~~~~~~~~~v~fs~Edasrtd~dfl~ev~~aa~ea 238 (644)
T 3hq1_A 160 GAPRAIVHFYNSTSI-LQRRVVFRANRAEVQAIATDGARKCVEQAAKYPGTQWRFEYSPESYTGTELEYAKQVCDAVGEV 238 (644)
T ss_dssp TCSEEEEEEEEECCH-HHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHSCSSEEEEEEEEETGGGSCHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEecCCH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhccCceEEEEEcCcccCCCCHHHHHHHHHHHHHh
Confidence 889999999887773 23222234566655554 444555432 2334445543 13566677888887775
Q ss_pred CC-CCCeeeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCc-eeecC--C-cccccChhHHHHHHHcCCceEee-
Q 020848 195 PT-HPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKA-MVRLS--A-GRVRFSMPEQALCFLAGANSIFT- 268 (320)
Q Consensus 195 ~~-~~~~v~~~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~-~i~~~--~-g~~~~~~~~~~~~~~~Gan~~~~- 268 (320)
+. +++...... ++.|- ....+.++..++...+..+|.. .+.++ + .-.++--.....++.+||..+-.
T Consensus 239 G~~Gad~~~~I~---LpDTv----G~~tP~~~~~li~~l~~~v~~~~~v~l~vH~HND~GlAvANslaAv~AGA~~Vdgt 311 (644)
T 3hq1_A 239 IAPTPERPIIFN---LPATV----EMTTPNVYADSIEWMSRNLANRESVILSLHPHNDRGTAVAAAELGFAAGADRIEGC 311 (644)
T ss_dssp HCCCSSSCEEEE---EEESS----CCSCHHHHHHHHHHHHHHSTTGGGEEEEEEEBCTTSCHHHHHHHHHHTTCCEEEEB
T ss_pred cCCCCCceeEEE---ecCCC----cccCHHHHHHHHHHHHHhcccccCceEEEecCCCCCcHHHHHHHHHHhCCCEEEec
Confidence 31 133211122 23332 2356778888888777777641 12221 1 00111122346788999998721
Q ss_pred --CCccccCCCCChhHHHHHHHHcCCCcC
Q 020848 269 --GEKLLTTPNNDFDADQLMFKVLGLTPK 295 (320)
Q Consensus 269 --~~~~~~~~~~~~~~~~~~i~~~G~~p~ 295 (320)
|-+ ..++....++++-++...|+.+.
T Consensus 312 i~G~G-ERaGNa~LE~lv~~L~~~Gi~tg 339 (644)
T 3hq1_A 312 LFGNG-ERTGNVCLVTLGLNLFSRGVDPQ 339 (644)
T ss_dssp GGGCS-STTCBCBHHHHHHHHHTTTCCCS
T ss_pred CCCCC-ccccCccHHHHHHHHHhcccCCc
Confidence 210 13455677888888877787654
No 47
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=94.75 E-value=0.49 Score=41.05 Aligned_cols=137 Identities=12% Similarity=0.190 Sum_probs=79.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCC----chhHHHHHHHHHHhhh-cCceEEEeCCCCCHHHHHHHHHhccC
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGR----KTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAGLT 130 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge----~~~~~~l~~~i~~~k~-~~~~i~~~~g~l~~e~l~~L~~aGld 130 (320)
.+++.+++.++...+.|.+-|-+++-.+-++.+ ...++.+...|+.+++ .++++++. ....+.++.-.++|.+
T Consensus 60 ~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~vpiSID--T~~~~V~~aAl~aGa~ 137 (297)
T 1tx2_A 60 NEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKLPISID--TYKAEVAKQAIEAGAH 137 (297)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCSCEEEE--CSCHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCceEEEe--CCCHHHHHHHHHcCCC
Confidence 578999999999999999999998633323322 2345667777788774 36665443 3567888887778887
Q ss_pred eec-cCcccc-HHHHhhh---C--------CC-CC--------HHHHHHHHHHHHHcCCe---eeeeEEEEeCCCHHHHH
Q 020848 131 AYN-HNLDTS-REFYSKI---I--------TT-RS--------YDERLETLKHVREAGIN---VCSGGIIGLGEAEEDRV 185 (320)
Q Consensus 131 ~v~-i~let~-~~~~~~i---~--------~~-~~--------~~~~l~~i~~a~~~Gi~---v~~~~i~Glget~ed~~ 185 (320)
-|+ ++-... ++.++.+ . ++ .. .+...+.++.+.++|++ +-++--+|++.+.++-.
T Consensus 138 iINdvsg~~~d~~m~~~aa~~g~~vVlmh~~G~p~y~d~v~ev~~~l~~~i~~a~~~GI~~~~IilDPg~Gfgk~~~~n~ 217 (297)
T 1tx2_A 138 IINDIWGAKAEPKIAEVAAHYDVPIILMHNRDNMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGIGFAKTPEQNL 217 (297)
T ss_dssp EEEETTTTSSCTHHHHHHHHHTCCEEEECCCSCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHH
T ss_pred EEEECCCCCCCHHHHHHHHHhCCcEEEEeCCCCCCcchHHHHHHHHHHHHHHHHHHcCCChhcEEEeCCCCcCCCHHHHH
Confidence 764 332221 2222211 0 00 01 13334455556667775 55665555666666555
Q ss_pred HHHHHHhcC
Q 020848 186 GLLHTLATL 194 (320)
Q Consensus 186 ~~l~~l~~l 194 (320)
++++.+..+
T Consensus 218 ~ll~~l~~l 226 (297)
T 1tx2_A 218 EAMRNLEQL 226 (297)
T ss_dssp HHHHTGGGG
T ss_pred HHHHHHHHH
Confidence 555555444
No 48
>3e49_A Uncharacterized protein DUF849 with A TIM barrel; structural genomics, joint center for structural genomics; HET: MSE; 1.75A {Burkholderia xenovorans LB400}
Probab=94.58 E-value=2.1 Score=37.27 Aligned_cols=230 Identities=17% Similarity=0.156 Sum_probs=125.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCC-CCCCc-hhHHHHHHHHHHhh-hcCceEEEeCC-C--C-CHHHHHHHHHhc
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRD-TIGRK-TNFNQILEYVKDIR-DMGMEVCCTLG-M--L-EKHQAIELKKAG 128 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~-~~ge~-~~~~~l~~~i~~~k-~~~~~i~~~~g-~--l-~~e~l~~L~~aG 128 (320)
+++|||.+.+....+.|..-+++-. +. ..|.| ...+.+.+++..+| ..++-+..|.| . . .++.+..+.+..
T Consensus 29 vTpeEia~~A~~~~~AGAaivHlHv--Rdp~dG~ps~d~~~~~e~~~~IR~~~d~iI~~TTgg~~~~~~eerla~~~~~~ 106 (311)
T 3e49_A 29 VTPDEVAQASIGAAEAGAAVIHLHA--RDPRDGRPTQDPAAFAEFLPRIKSNTDAVINLTTGGSPHMTVEERLRPATHYM 106 (311)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEEECE--ECTTTCCEECCHHHHTTHHHHHHHHCCCEEEECSCSCTTSCHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEee--cCCCCCCcCCCHHHHHHHHHHHHHhCCcEEEECCCCCCCCCHHHHHHHHHhcC
Confidence 8999999999999999998888743 33 12434 34455666666666 34555544443 2 2 355666666655
Q ss_pred cCeeccCcccc------------------HH-HHh----hhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHH
Q 020848 129 LTAYNHNLDTS------------------RE-FYS----KIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRV 185 (320)
Q Consensus 129 ld~v~i~let~------------------~~-~~~----~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~ 185 (320)
-|..+++.-+. +. .+. .+- ..+++.+.+.++.+.+.|++....+ + +..++.
T Consensus 107 Pe~aSln~gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~~~v~-~n~~~~i~~~~~~~~e~Gi~pE~e~-f----d~g~l~ 180 (311)
T 3e49_A 107 PELASLNMGSMNFGLYPMLERFKEFAHGWEREHLERSRDLVF-KNTFADIEFILKTCGGNGTRFEFEC-Y----DTSHLY 180 (311)
T ss_dssp CSEEEEECSCEECCCGGGGGTCCCCSSHHHHHHHHGGGGCEE-CCCHHHHHHHHHHHHTTTCEEEEEE-C----SHHHHH
T ss_pred CCeeeecCCCcccccccchhhccccccccchhhcccCCCcee-cCCHHHHHHHHHHHHHcCCeeEEEE-E----CHHHHH
Confidence 55444432221 00 111 111 2467788888999999998765442 2 445665
Q ss_pred HHHHHHhcCCCCCCeeeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCC-ceeecC-CcccccChhHHHHHHHcCC
Q 020848 186 GLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPK-AMVRLS-AGRVRFSMPEQALCFLAGA 263 (320)
Q Consensus 186 ~~l~~l~~l~~~~~~v~~~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~-~~i~~~-~g~~~~~~~~~~~~~~~Ga 263 (320)
....++++ |.-...+ +..|+- |-+.. -+.+++.+.-++..+..++|. ....+. -|+.. -+....++..|.
T Consensus 181 ~~~~l~~~-Gl~~~p~-~~~~vl--Gv~~g--~~~~~~~L~~~~~~~~~~~~~~~~wsv~~~Gr~~--~p~~~~A~~~GG 252 (311)
T 3e49_A 181 NLAHFVDR-KLATPPF-FVQTVF--GLLGG--IGPHPEDLAHMRRTADRLFGADYVWSILGAGRHQ--IPLASIGAAQGA 252 (311)
T ss_dssp HHHHHHHT-TCSCSSE-EEEEEE--SCTTS--CCCCHHHHHHHHHHHHHHHGGGEEEEEEECGGGH--HHHHHHHHTTTC
T ss_pred HHHHHHHc-CCCCCCe-EEEEEe--cCCCC--CCCCHHHHHHHHHHHHhhCCCCCeEEEEeeChhh--HHHHHHHHHcCC
Confidence 55555543 3211122 222322 32222 245677776666555344443 222222 12111 123355677787
Q ss_pred ceEee-CCccccCCC-------CChhHHHHHHHHcCCCcCCCCCCc
Q 020848 264 NSIFT-GEKLLTTPN-------NDFDADQLMFKVLGLTPKAPSFHE 301 (320)
Q Consensus 264 n~~~~-~~~~~~~~~-------~~~~~~~~~i~~~G~~p~~~~~~~ 301 (320)
|.-+. +|.+....| .-+++.+++++++|+.|...+.-+
T Consensus 253 hvRVGlEDnl~~~~G~lA~sNaelV~~~~~i~~~lgr~vATp~EAR 298 (311)
T 3e49_A 253 NVRVGLEDSLWIAPGELAETNAAQVRKIRQVIEGLSLEVASPAEAR 298 (311)
T ss_dssp EEEECTTTCSEEETTEECSCHHHHHHHHHHHHHHTTCCBCCHHHHH
T ss_pred CeEEcCCcceecCCCCCCCCHHHHHHHHHHHHHHcCCCCCCHHHHH
Confidence 74332 232222222 237788899999999988765433
No 49
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=94.43 E-value=0.45 Score=41.22 Aligned_cols=77 Identities=16% Similarity=0.198 Sum_probs=46.3
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecccCCCC----CCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccC
Q 020848 55 LMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTI----GRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLT 130 (320)
Q Consensus 55 ~~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~----ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld 130 (320)
+.+.+.+++.++.+.+.|++-+-+++-.+-++ .+...++.+...++.+++.++.+++ .....+.++.-.++|.+
T Consensus 48 ~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~~vpiSI--DT~~~~Va~aAl~aGa~ 125 (294)
T 2dqw_A 48 YLDPERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSLGVPVSV--DTRKPEVAEEALKLGAH 125 (294)
T ss_dssp -----CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTTCSCEEE--ECSCHHHHHHHHHHTCS
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhCCCeEEE--ECCCHHHHHHHHHhCCC
Confidence 36789999999999999999888877322222 2234667888888888744555433 33556666666666666
Q ss_pred eec
Q 020848 131 AYN 133 (320)
Q Consensus 131 ~v~ 133 (320)
-|+
T Consensus 126 iIN 128 (294)
T 2dqw_A 126 LLN 128 (294)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 50
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=94.35 E-value=0.63 Score=38.76 Aligned_cols=195 Identities=14% Similarity=0.097 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHHcCCCEEEEe--cccCCCCCCchhHHHHHHHHHHhhhc-Cce----EEEeCCCCCHHHHHHHHHhccC
Q 020848 58 KDAVMQAAQKAKEAGSTRFCMG--AAWRDTIGRKTNFNQILEYVKDIRDM-GME----VCCTLGMLEKHQAIELKKAGLT 130 (320)
Q Consensus 58 ~eei~~~~~~~~~~g~~~i~l~--~g~~~~~ge~~~~~~l~~~i~~~k~~-~~~----i~~~~g~l~~e~l~~L~~aGld 130 (320)
...+.+.++.+.+.|++-+.+. .|...+ .+..-.+.++.+++. +.+ +.+++ .++.++.+.++|.|
T Consensus 16 ~~~l~~~i~~~~~~Gad~ihldi~DG~fvp-----~~~~g~~~v~~lr~~~~~~~~vhlmv~d---p~~~i~~~~~aGad 87 (230)
T 1tqj_A 16 FSRLGEEIKAVDEAGADWIHVDVMDGRFVP-----NITIGPLIVDAIRPLTKKTLDVHLMIVE---PEKYVEDFAKAGAD 87 (230)
T ss_dssp GGGHHHHHHHHHHTTCSEEEEEEEBSSSSS-----CBCBCHHHHHHHGGGCCSEEEEEEESSS---GGGTHHHHHHHTCS
T ss_pred HhHHHHHHHHHHHcCCCEEEEEEEecCCCc-----chhhhHHHHHHHHhhcCCcEEEEEEccC---HHHHHHHHHHcCCC
Confidence 4556666777777899876653 221111 111122555566542 322 33322 24568899999999
Q ss_pred eeccCcc--ccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeeeeeee
Q 020848 131 AYNHNLD--TSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLA 208 (320)
Q Consensus 131 ~v~i~le--t~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~~~p 208 (320)
.+.+..+ .. . ...+.++.+++.|+.+++.+ .. .|..+.. +.+.+ + ++.+.+....|
T Consensus 88 gv~vh~e~~~~----------~---~~~~~~~~i~~~g~~~gv~~--~p-~t~~e~~---~~~~~-~--~D~v~~msv~p 145 (230)
T 1tqj_A 88 IISVHVEHNAS----------P---HLHRTLCQIRELGKKAGAVL--NP-STPLDFL---EYVLP-V--CDLILIMSVNP 145 (230)
T ss_dssp EEEEECSTTTC----------T---THHHHHHHHHHTTCEEEEEE--CT-TCCGGGG---TTTGG-G--CSEEEEESSCC
T ss_pred EEEECcccccc----------h---hHHHHHHHHHHcCCcEEEEE--eC-CCcHHHH---HHHHh-c--CCEEEEEEecc
Confidence 9999876 32 1 12456677788887765443 22 2333221 11122 2 56777777666
Q ss_pred cCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccChhHHHHHHHcCCceEeeCCccccCCCCChhHHHHHHH
Q 020848 209 VKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFK 288 (320)
Q Consensus 209 ~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~~~~~~~~~~Gan~~~~~~~~~~~~~~~~~~~~~~i~ 288 (320)
..|. ....+...+.+.++.+.....-.+..+.+.+| +..+.......+||+.++.|..+... .++.+.++.++
T Consensus 146 g~gg--q~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GG---I~~~~~~~~~~aGad~vvvGSai~~a--~d~~~~~~~l~ 218 (230)
T 1tqj_A 146 GFGG--QSFIPEVLPKIRALRQMCDERGLDPWIEVDGG---LKPNNTWQVLEAGANAIVAGSAVFNA--PNYAEAIAGVR 218 (230)
T ss_dssp ------CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESS---CCTTTTHHHHHHTCCEEEESHHHHTS--SCHHHHHHHHH
T ss_pred ccCC--ccCcHHHHHHHHHHHHHHHhcCCCCcEEEECC---cCHHHHHHHHHcCCCEEEECHHHHCC--CCHHHHHHHHH
Confidence 3321 22222223332222222211111233333332 22233345667899999998744432 34666666665
Q ss_pred H
Q 020848 289 V 289 (320)
Q Consensus 289 ~ 289 (320)
+
T Consensus 219 ~ 219 (230)
T 1tqj_A 219 N 219 (230)
T ss_dssp T
T ss_pred H
Confidence 4
No 51
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=94.30 E-value=1 Score=38.95 Aligned_cols=76 Identities=12% Similarity=0.208 Sum_probs=53.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCC----CCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCe
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTI----GRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTA 131 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~----ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~ 131 (320)
.+++.+++.++.+.+.|+.-|-+++-.+-++ .+...++.+...|+.+++.++.+++ .....+.++.-.++|.+-
T Consensus 43 ~~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~~vpiSI--DT~~~~Va~aAl~aGa~i 120 (294)
T 2y5s_A 43 LARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPLNVPLSI--DTYKPAVMRAALAAGADL 120 (294)
T ss_dssp -CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGGCSCEEE--ECCCHHHHHHHHHHTCSE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhCCCeEEE--ECCCHHHHHHHHHcCCCE
Confidence 6789999999999999999888887332222 1234567788888888754655544 346678888877788776
Q ss_pred ec
Q 020848 132 YN 133 (320)
Q Consensus 132 v~ 133 (320)
|+
T Consensus 121 IN 122 (294)
T 2y5s_A 121 IN 122 (294)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 52
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=94.20 E-value=1 Score=38.50 Aligned_cols=74 Identities=14% Similarity=0.139 Sum_probs=55.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhh-cCceEEEeCCCCCHHHHHHHHHh--ccCee
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKA--GLTAY 132 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~-~~~~i~~~~g~l~~e~l~~L~~a--Gld~v 132 (320)
.+.+.+++.++...+.|..-+-++++. .+....+.+..+++.+++ .++++++. ....+.++.-.++ |.+-|
T Consensus 31 ~~~~~a~~~a~~~v~~GAdiIDIg~~s----~~~eE~~rv~~vi~~l~~~~~~pisID--T~~~~v~~aal~a~~Ga~iI 104 (271)
T 2yci_X 31 KDPRPIQEWARRQAEKGAHYLDVNTGP----TADDPVRVMEWLVKTIQEVVDLPCCLD--STNPDAIEAGLKVHRGHAMI 104 (271)
T ss_dssp TCCHHHHHHHHHHHHTTCSEEEEECCS----CSSCHHHHHHHHHHHHHHHCCCCEEEE--CSCHHHHHHHHHHCCSCCEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCc----CchhHHHHHHHHHHHHHHhCCCeEEEe--CCCHHHHHHHHHhCCCCCEE
Confidence 567999999999999999999887754 122356788888888875 36665443 3578888888888 88777
Q ss_pred c-cC
Q 020848 133 N-HN 135 (320)
Q Consensus 133 ~-i~ 135 (320)
+ ++
T Consensus 105 Ndvs 108 (271)
T 2yci_X 105 NSTS 108 (271)
T ss_dssp EEEC
T ss_pred EECC
Confidence 5 44
No 53
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=94.12 E-value=1.3 Score=37.57 Aligned_cols=204 Identities=15% Similarity=0.076 Sum_probs=88.1
Q ss_pred HHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHhccCeeccCcccc
Q 020848 61 VMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTS 139 (320)
Q Consensus 61 i~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~let~ 139 (320)
..+.++.+.+.|++.+.+..-.....+.. ...+.++.++ ..++++.+..|..+.+.++.+.++|+|.+.++-...
T Consensus 32 ~~~~a~~~~~~Ga~~i~v~d~~~~~~~~g----~~~~~i~~i~~~~~iPvi~~ggi~~~~~i~~~~~~Gad~v~lg~~~~ 107 (266)
T 2w6r_A 32 LRDWVVEVEKRGAGEILLTSIDRDGTKSG----YDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADKALAASVFH 107 (266)
T ss_dssp HHHHHHHHHHHTCSEEEEEETTTSSCSSC----CCHHHHHHHGGGCCSCEEEESCCCSTHHHHHHHHHTCSEEECCCCC-
T ss_pred HHHHHHHHHHCCCCEEEEEecCcccCCCc----ccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCcHhhhhHHHH
Confidence 34455566678999999865321111111 1345566666 457888888888888999999999999998874322
Q ss_pred HHHHhhhCCCCCHHHHHHHHHHHHHcC--C-e--eeeeE--------EEEeCCCH---HHHHHHHHHHhcCCCCCCeeee
Q 020848 140 REFYSKIITTRSYDERLETLKHVREAG--I-N--VCSGG--------IIGLGEAE---EDRVGLLHTLATLPTHPESVPI 203 (320)
Q Consensus 140 ~~~~~~i~~~~~~~~~l~~i~~a~~~G--i-~--v~~~~--------i~Glget~---ed~~~~l~~l~~l~~~~~~v~~ 203 (320)
. ...+++...+.++ ..| . . +.+++ +.-.+... .+..+.++.+.++| +..+.+
T Consensus 108 ~-------~~~~~~~~~~~~~---~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G--~~~i~~ 175 (266)
T 2w6r_A 108 F-------REIDMRELKEYLK---KHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVEVEKRG--AGEILL 175 (266)
T ss_dssp ------------CHHHHHHCC-------CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTT--CSEEEE
T ss_pred h-------CCCCHHHHHHHHH---HcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHHHHHcC--CCEEEE
Confidence 0 0001222222222 223 1 1 22222 11123210 12344555566777 555544
Q ss_pred eeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccC-hhHHHHHHHcCCceEeeCCccccCCCCChhH
Q 020848 204 NALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFS-MPEQALCFLAGANSIFTGEKLLTTPNNDFDA 282 (320)
Q Consensus 204 ~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~-~~~~~~~~~~Gan~~~~~~~~~~~~~~~~~~ 282 (320)
.... ..|+. ..++.+ .+...+...+-+.+ ..+ ++. ++.-...+.+||+.++.|..+. .......+
T Consensus 176 t~~~-~~g~~----~g~~~~----~i~~l~~~~~ipvi-a~G---GI~~~ed~~~~~~~Gadgv~vgsal~-~~~~~~~~ 241 (266)
T 2w6r_A 176 TSID-RDGTK----SGYDTE----MIRFVRPLTTLPII-ASG---GAGKMEHFLEAFLAGADAALAASVFH-FREIDMRE 241 (266)
T ss_dssp EETT-TTTTC----SCCCHH----HHHHHGGGCCSCEE-EES---CCCSHHHHHHHHHHTCSEEEESTTTC---------
T ss_pred Eeec-CCCCc----CCCCHH----HHHHHHHHcCCCEE-EeC---CCCCHHHHHHHHHcCCHHHHccHHHH-cCCCCHHH
Confidence 3211 11322 123332 22222222221222 222 222 2222345568999999997544 33346788
Q ss_pred HHHHHHHcCCCc
Q 020848 283 DQLMFKVLGLTP 294 (320)
Q Consensus 283 ~~~~i~~~G~~p 294 (320)
..+.+.+.|+.+
T Consensus 242 ~~~~l~~~g~~~ 253 (266)
T 2w6r_A 242 LKEYLKKHGVNV 253 (266)
T ss_dssp ------------
T ss_pred HHHHHHHCCCcc
Confidence 888888998853
No 54
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=93.97 E-value=0.22 Score=41.88 Aligned_cols=190 Identities=7% Similarity=0.041 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHHHcCCCEEEE--ecccCCCCCCchhHHHHHHHHHHhhhc---CceEEEeCCCCCHHHHHHHHHhccCee
Q 020848 58 KDAVMQAAQKAKEAGSTRFCM--GAAWRDTIGRKTNFNQILEYVKDIRDM---GMEVCCTLGMLEKHQAIELKKAGLTAY 132 (320)
Q Consensus 58 ~eei~~~~~~~~~~g~~~i~l--~~g~~~~~ge~~~~~~l~~~i~~~k~~---~~~i~~~~g~l~~e~l~~L~~aGld~v 132 (320)
+..+.++++.+.+.|++-+.+ -.|... | .+..=.+.++.+++. ++.+++++. +..++.+.++|.|.+
T Consensus 25 ~~~l~~~i~~~~~~gad~lhvDvmDG~fv----p-n~t~G~~~v~~lr~~~~~DvhLMv~~p---~~~i~~~~~aGAd~i 96 (237)
T 3cu2_A 25 WLQLNEEVTTLLENQINVLHFDIADGQFS----S-LFTVGAIGIKYFPTHCFKDVHLMVRNQ---LEVAKAVVANGANLV 96 (237)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEEEEBSSSS----S-CBCBCTHHHHTSCTTSEEEEEEECSCH---HHHHHHHHHTTCSEE
T ss_pred cccHHHHHHHHHHcCCCEEEEEEecCccc----c-chhhhHHHHHHHhhhCCCCeEEEEECH---HHHHHHHHHcCCCEE
Confidence 345566677777788887655 232211 1 111111444555532 444444433 678999999999998
Q ss_pred ccCccccHHHHhhhCCCCCHHHHHHHHHHHHHc---------CCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeee
Q 020848 133 NHNLDTSREFYSKIITTRSYDERLETLKHVREA---------GINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPI 203 (320)
Q Consensus 133 ~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~---------Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~ 203 (320)
.+..++. ... .+.++.+++. |.++++.+ . ..|..+. ++.+.+ .++.+.+
T Consensus 97 tvH~ea~----------~~~---~~~i~~i~~~~~~~~~~~~g~~~gv~l--~-p~Tp~~~---l~~~l~---~~D~vlv 154 (237)
T 3cu2_A 97 TLQLEQY----------HDF---ALTIEWLAKQKTTYANQVYPVLIGACL--C-PETPISE---LEPYLD---QIDVIQL 154 (237)
T ss_dssp EEETTCT----------TSH---HHHHHHHTTCEEEETTEEEECEEEEEE--C-TTSCGGG---GTTTTT---TCSEEEE
T ss_pred EEecCCc----------ccH---HHHHHHHHhcccccccccCCceEEEEE--e-CCChHHH---HHHHhh---cCceeee
Confidence 8877653 112 4566777777 66554443 1 2333221 111111 2677777
Q ss_pred eeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCC----ceeecCCcccccChhHHHHHHH--cCCceEeeCCccccCCC
Q 020848 204 NALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPK----AMVRLSAGRVRFSMPEQALCFL--AGANSIFTGEKLLTTPN 277 (320)
Q Consensus 204 ~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~----~~i~~~~g~~~~~~~~~~~~~~--~Gan~~~~~~~~~~~~~ 277 (320)
+...| |+.-+ .. ....+..++..|.+.+. ..+.+.+ ++..+....... +||+.++.|..+.. .
T Consensus 155 Msv~p--gfggq--~f--~~~~l~ki~~lr~~~~~~~~~~~I~vdG---GI~~~~~~~~~~~~aGad~~VvGSaIf~-~- 223 (237)
T 3cu2_A 155 LTLDP--RNGTK--YP--SELILDRVIQVEKRLGNRRVEKLINIDG---SMTLELAKYFKQGTHQIDWLVSGSALFS-G- 223 (237)
T ss_dssp ESEET--TTTEE--CC--HHHHHHHHHHHHHHHGGGGGGCEEEEES---SCCHHHHHHHHHSSSCCCCEEECGGGGS-S-
T ss_pred eeecc--CcCCe--ec--ChhHHHHHHHHHHHHHhcCCCceEEEEC---CcCHHHHHHHHHhCCCCcEEEEeeHHhC-C-
Confidence 77766 43311 11 34445555556655542 2333333 344555567788 99999999974443 2
Q ss_pred CChhHHHHHHHH
Q 020848 278 NDFDADQLMFKV 289 (320)
Q Consensus 278 ~~~~~~~~~i~~ 289 (320)
++.+.++.+++
T Consensus 224 -d~~~~~~~l~~ 234 (237)
T 3cu2_A 224 -ELKTNLKVWKS 234 (237)
T ss_dssp -CHHHHHHHHHH
T ss_pred -CHHHHHHHHHH
Confidence 56666666654
No 55
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=93.88 E-value=2.4 Score=35.24 Aligned_cols=196 Identities=13% Similarity=0.044 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHhccCeeccCccc
Q 020848 60 AVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDT 138 (320)
Q Consensus 60 ei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~let 138 (320)
+..+.++.+.+.|++.+.+..-+....+.+ . . +.++.++ ..++++.++.+..+++.++.+.++|+|.|.++.+.
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~-~---~-~~i~~i~~~~~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg~~~ 107 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGTGD-N---R-ALIAEVAQAMDIKVELSGGIRDDDTLAAALATGCTRVNLGTAA 107 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTSCC-C---H-HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcCCC-h---H-HHHHHHHHhcCCcEEEECCcCCHHHHHHHHHcCCCEEEECchH
Confidence 445556777779999998853111111111 1 2 5566665 45788888888889999999999999999987654
Q ss_pred cHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeE----EEEeCCC--HHHHHHHHHHHhcCCCCCCeeeeeeeeecCCC
Q 020848 139 SREFYSKIITTRSYDERLETLKHVREAGINVCSGG----IIGLGEA--EEDRVGLLHTLATLPTHPESVPINALLAVKGT 212 (320)
Q Consensus 139 ~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~----i~Glget--~ed~~~~l~~l~~l~~~~~~v~~~~~~p~~gt 212 (320)
.+ +.+...+.++.+.. .+.+.++. +.-.|.. ..+..+.++.+.++| ++.+.+....+- ++
T Consensus 108 l~----------~p~~~~~~~~~~g~-~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~~G--~~~i~~~~~~~~-~~ 173 (244)
T 1vzw_A 108 LE----------TPEWVAKVIAEHGD-KIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNKEG--CARYVVTDIAKD-GT 173 (244)
T ss_dssp HH----------CHHHHHHHHHHHGG-GEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHHTT--CCCEEEEEC------
T ss_pred hh----------CHHHHHHHHHHcCC-cEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHhCC--CCEEEEeccCcc-cc
Confidence 31 12223333333321 11122222 2212221 013455566667777 666666544331 21
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccCh-hHHHHHHHc---CCceEeeCCccccCCCCChhHHHHHH
Q 020848 213 PLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSM-PEQALCFLA---GANSIFTGEKLLTTPNNDFDADQLMF 287 (320)
Q Consensus 213 ~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~-~~~~~~~~~---Gan~~~~~~~~~~~~~~~~~~~~~~i 287 (320)
. ..++.+.+.++. .... ..+-..+ ++.. +.-...+.+ ||+.++.|..+.. ...+..+..+.+
T Consensus 174 ~----~g~~~~~~~~i~----~~~~-ipvia~G---GI~~~~d~~~~~~~~~~Gadgv~vG~al~~-~~~~~~~~~~~~ 239 (244)
T 1vzw_A 174 L----QGPNLELLKNVC----AATD-RPVVASG---GVSSLDDLRAIAGLVPAGVEGAIVGKALYA-KAFTLEEALEAT 239 (244)
T ss_dssp ------CCCHHHHHHHH----HTCS-SCEEEES---CCCSHHHHHHHHTTGGGTEEEEEECHHHHT-TSSCHHHHHHHH
T ss_pred c----CCCCHHHHHHHH----HhcC-CCEEEEC---CCCCHHHHHHHHhhccCCCceeeeeHHHHc-CCCCHHHHHHHh
Confidence 1 123333322222 2222 1222222 2222 333456667 9999998875443 233456655544
No 56
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=93.76 E-value=3.1 Score=36.06 Aligned_cols=197 Identities=14% Similarity=0.136 Sum_probs=108.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhh-cCceEEEeCCCCCHHHHHHHHH--hccCee
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKK--AGLTAY 132 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~-~~~~i~~~~g~l~~e~l~~L~~--aGld~v 132 (320)
.+++++++.++...+.|++-+-+++|... ..+...+.+++..++.+++ .++++++. ....+.++.-.+ +|.+-|
T Consensus 34 ~~~~~a~~~A~~~v~~GAdiIDIg~g~~~-v~~~eem~rvv~~i~~~~~~~~vpisID--T~~~~V~eaaL~~~~Ga~iI 110 (300)
T 3k13_A 34 KKYDEALSIARQQVEDGALVIDVNMDDGL-LDARTEMTTFLNLIMSEPEIARVPVMID--SSKWEVIEAGLKCLQGKSIV 110 (300)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEEECCCTT-SCHHHHHHHHHHHHHTCHHHHTSCEEEE--CSCHHHHHHHHHHCSSCCEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCC-CCHHHHHHHHHHHHHHhhhcCCCeEEEe--CCCHHHHHHHHHhcCCCCEE
Confidence 57899999999999999998888775322 2333455666666665543 35665443 356777777666 577654
Q ss_pred c-cCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEE--EEeCCCHHHHHHHHH----HH-hcCCCCCCeeeee
Q 020848 133 N-HNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGI--IGLGEAEEDRVGLLH----TL-ATLPTHPESVPIN 204 (320)
Q Consensus 133 ~-i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i--~Glget~ed~~~~l~----~l-~~l~~~~~~v~~~ 204 (320)
+ ++.+.. -+.+.+.+..+++.|..+.+--+ -|...+.++..++.+ .+ .+.|...+.|-+-
T Consensus 111 NdIs~~~~------------d~~~~~~~~l~a~~ga~vV~mh~d~~G~p~t~~~~~~i~~r~~~~~~~~~Gi~~~~IilD 178 (300)
T 3k13_A 111 NSISLKEG------------EEVFLEHARIIKQYGAATVVMAFDEKGQADTAARKIEVCERAYRLLVDKVGFNPHDIIFD 178 (300)
T ss_dssp EEECSTTC------------HHHHHHHHHHHHHHTCEEEEESEETTEECCSHHHHHHHHHHHHHHHHHHTCCCGGGEEEE
T ss_pred EeCCcccC------------ChhHHHHHHHHHHhCCeEEEEeeCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCHHHEEEe
Confidence 3 232211 11223456677788887543333 355667776554443 32 5566433555555
Q ss_pred eee-ecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccCh------------hHHHHHHHcCCceEeeC
Q 020848 205 ALL-AVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSM------------PEQALCFLAGANSIFTG 269 (320)
Q Consensus 205 ~~~-p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~------------~~~~~~~~~Gan~~~~~ 269 (320)
+.+ |+ ++..... .-..-++++.+...+..+|...+-+..++.+|.- -.-..++.+|.+..+.+
T Consensus 179 Pgig~~-gk~~~~~-~~~~~~~l~~l~~lk~~lPg~pvl~G~SnkSfglp~~~~~R~~~n~~fl~~ai~~Gld~~Ivn 254 (300)
T 3k13_A 179 PNVLAV-ATGIEEH-NNYAVDFIEATGWIRKNLPGAHVSGGVSNLSFSFRGNNYIREAMHAVFLYHAIQQGMDMGIVN 254 (300)
T ss_dssp CCCCCC-SSSCGGG-TTHHHHHHHHHHHHHHHSTTCEECCBGGGGGGGGTTCHHHHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCCCcc-CCChHHh-hHHHHHHHHHHHHHHHhCCCCCEEEEECcccccCCCCcchhHHHHHHHHHHHHHcCCCEEecC
Confidence 443 22 1111110 0113455666666665566544333222222221 13345778899887654
No 57
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=93.70 E-value=2.9 Score=35.46 Aligned_cols=187 Identities=11% Similarity=0.121 Sum_probs=101.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCCCC-CCch-------------hHHHHHHHHHHhhh-c-CceEEEeCCCC----
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTI-GRKT-------------NFNQILEYVKDIRD-M-GMEVCCTLGML---- 116 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l~~g~~~~~-ge~~-------------~~~~l~~~i~~~k~-~-~~~i~~~~g~l---- 116 (320)
+.++.++.++.+.+.|++.+-++.....+. ..|. ..+.++++++.+++ . ++++..- +..
T Consensus 29 ~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~m-~y~n~v~ 107 (262)
T 2ekc_A 29 DYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLM-TYYNPIF 107 (262)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEE-CCHHHHH
T ss_pred ChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEEE-ecCcHHH
Confidence 567888889999999999998864211111 0111 22467788888884 3 6664331 111
Q ss_pred ---CHHHHHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhc
Q 020848 117 ---EKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLAT 193 (320)
Q Consensus 117 ---~~e~l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~ 193 (320)
.++.++.++++|+|.+.+. .-.+++..+.++.+++.|+.+. .++....+.+.+.++.....
T Consensus 108 ~~g~~~f~~~~~~aG~dgvii~-------------dl~~ee~~~~~~~~~~~gl~~i--~l~~p~t~~~rl~~ia~~a~- 171 (262)
T 2ekc_A 108 RIGLEKFCRLSREKGIDGFIVP-------------DLPPEEAEELKAVMKKYVLSFV--PLGAPTSTRKRIKLICEAAD- 171 (262)
T ss_dssp HHCHHHHHHHHHHTTCCEEECT-------------TCCHHHHHHHHHHHHHTTCEEC--CEECTTCCHHHHHHHHHHCS-
T ss_pred HhhHHHHHHHHHHcCCCEEEEC-------------CCCHHHHHHHHHHHHHcCCcEE--EEeCCCCCHHHHHHHHHhCC-
Confidence 1577888999999987773 1234666777788899998651 22222334444444444331
Q ss_pred CCCCCCeeeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccChhHHHHHHHcCCceEeeCCccc
Q 020848 194 LPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLL 273 (320)
Q Consensus 194 l~~~~~~v~~~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~~~~~~~~~~Gan~~~~~~~~~ 273 (320)
+ .+........-|.. .+.+..+....++..|.... ..+-+. .++....+...+.+||+.+++|..+.
T Consensus 172 -g----fiy~vs~~g~TG~~----~~~~~~~~~~~v~~vr~~~~-~pv~vG---~GI~t~e~~~~~~~gADgvIVGSai~ 238 (262)
T 2ekc_A 172 -E----MTYFVSVTGTTGAR----EKLPYERIKKKVEEYRELCD-KPVVVG---FGVSKKEHAREIGSFADGVVVGSALV 238 (262)
T ss_dssp -S----CEEEESSCC-------------CHHHHHHHHHHHHHCC-SCEEEE---SSCCSHHHHHHHHTTSSEEEECHHHH
T ss_pred -C----CEEEEecCCccCCC----CCcCcccHHHHHHHHHhhcC-CCEEEe---CCCCCHHHHHHHHcCCCEEEECHHHH
Confidence 1 22222221122222 12221344556666666552 222222 23332334455889999999986443
No 58
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=93.58 E-value=2.6 Score=35.07 Aligned_cols=159 Identities=12% Similarity=0.073 Sum_probs=92.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhh-c-CceEEEeCCCCCHHHHHHHHHhccCeec
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-M-GMEVCCTLGMLEKHQAIELKKAGLTAYN 133 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~-~-~~~i~~~~g~l~~e~l~~L~~aGld~v~ 133 (320)
.+++++.+.++.+.+.|++-+-+.-- .|.. .+.++.+++ . ++-+-. ...++.++++...++|.+.+.
T Consensus 43 ~~~~~a~~~a~al~~gGi~~iEvt~~------t~~a----~e~I~~l~~~~~~~~iGa-GTVlt~~~a~~Ai~AGA~fIv 111 (232)
T 4e38_A 43 DNAEDIIPLGKVLAENGLPAAEITFR------SDAA----VEAIRLLRQAQPEMLIGA-GTILNGEQALAAKEAGATFVV 111 (232)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEETT------STTH----HHHHHHHHHHCTTCEEEE-ECCCSHHHHHHHHHHTCSEEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCC------CCCH----HHHHHHHHHhCCCCEEeE-CCcCCHHHHHHHHHcCCCEEE
Confidence 57889999999999999998877431 1222 244444442 2 232222 125889999999999999885
Q ss_pred cCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeeeeeeecCCCC
Q 020848 134 HNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTP 213 (320)
Q Consensus 134 i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~~~p~~gt~ 213 (320)
..- .+ .+.++.+++.|+.+-.+ .. |..|+... .++| .+.+.+++ ..+
T Consensus 112 sP~-------------~~----~~vi~~~~~~gi~~ipG----v~-TptEi~~A----~~~G--ad~vK~FP-----a~~ 158 (232)
T 4e38_A 112 SPG-------------FN----PNTVRACQEIGIDIVPG----VN-NPSTVEAA----LEMG--LTTLKFFP-----AEA 158 (232)
T ss_dssp CSS-------------CC----HHHHHHHHHHTCEEECE----EC-SHHHHHHH----HHTT--CCEEEECS-----TTT
T ss_pred eCC-------------CC----HHHHHHHHHcCCCEEcC----CC-CHHHHHHH----HHcC--CCEEEECc-----Ccc
Confidence 421 11 24456677778776443 32 77776655 3566 67777632 211
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccChhHHHHHHHcCCceEeeCC
Q 020848 214 LQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGE 270 (320)
Q Consensus 214 ~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~~~~~~~~~~Gan~~~~~~ 270 (320)
+ ..- ..+...+.-+|+..+-..+ ++.++.....+.+|+.....|.
T Consensus 159 ~------gG~---~~lkal~~p~p~ip~~ptG---GI~~~n~~~~l~aGa~~~vgGs 203 (232)
T 4e38_A 159 S------GGI---SMVKSLVGPYGDIRLMPTG---GITPSNIDNYLAIPQVLACGGT 203 (232)
T ss_dssp T------THH---HHHHHHHTTCTTCEEEEBS---SCCTTTHHHHHTSTTBCCEEEC
T ss_pred c------cCH---HHHHHHHHHhcCCCeeeEc---CCCHHHHHHHHHCCCeEEEECc
Confidence 1 111 3334444455653222222 2233334566788887766665
No 59
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=93.48 E-value=1.2 Score=37.09 Aligned_cols=74 Identities=12% Similarity=0.078 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHhccCeeccCccc
Q 020848 60 AVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDT 138 (320)
Q Consensus 60 ei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~let 138 (320)
+..+.++.+.+.|++.+.+..-+....+.+ . . +.++.++ ..++++.++.|..+++.++.+.++|+|.|.++.+.
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~-~---~-~~i~~i~~~~~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg~~~ 106 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFGRGS-N---H-ELLAEVVGKLDVQVELSGGIRDDESLAAALATGCARVNVGTAA 106 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTTSCC-C---H-HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccccCCC-h---H-HHHHHHHHhcCCcEEEECCCCCHHHHHHHHHcCCCEEEECchH
Confidence 445556677778999998853111111211 1 2 5556665 45788888888899999999999999999987644
No 60
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=93.45 E-value=3.2 Score=35.30 Aligned_cols=186 Identities=13% Similarity=0.089 Sum_probs=98.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCCCC-CCchh-------------HHHHHHHHHHhhh--cCceEE-Ee--CCC--
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTI-GRKTN-------------FNQILEYVKDIRD--MGMEVC-CT--LGM-- 115 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l~~g~~~~~-ge~~~-------------~~~l~~~i~~~k~--~~~~i~-~~--~g~-- 115 (320)
+++...+.++.+.+.|++-+-++--...+. ..|.. .+.++++++.+++ ..+++. .+ |-.
T Consensus 30 ~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~ 109 (267)
T 3vnd_A 30 SPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFA 109 (267)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHH
Confidence 578888888888999999888863211111 11211 2367888888884 355532 21 101
Q ss_pred -CCHHHHHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcC
Q 020848 116 -LEKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 194 (320)
Q Consensus 116 -l~~e~l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 194 (320)
-.++.++.++++|+|.+.+.-- .+++..+..+.+++.|++. .+++...-+.+.+..+.+.
T Consensus 110 ~g~e~f~~~~~~aGvdgvii~Dl-------------p~ee~~~~~~~~~~~gl~~--i~liaP~t~~eri~~i~~~---- 170 (267)
T 3vnd_A 110 NGIDEFYTKAQAAGVDSVLIADV-------------PVEESAPFSKAAKAHGIAP--IFIAPPNADADTLKMVSEQ---- 170 (267)
T ss_dssp HCHHHHHHHHHHHTCCEEEETTS-------------CGGGCHHHHHHHHHTTCEE--ECEECTTCCHHHHHHHHHH----
T ss_pred hhHHHHHHHHHHcCCCEEEeCCC-------------CHhhHHHHHHHHHHcCCeE--EEEECCCCCHHHHHHHHHh----
Confidence 1267899999999999877421 1233456677888899874 2233223333433333332
Q ss_pred CCCCCeeeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccChhHHHH-HHHcCCceEeeCCcc
Q 020848 195 PTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQAL-CFLAGANSIFTGEKL 272 (320)
Q Consensus 195 ~~~~~~v~~~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~~~~~~-~~~~Gan~~~~~~~~ 272 (320)
. ...+......+..|.. ..-+.+ ....++..|.... ..+-+. .++....+.. .+.+||+.++.|..+
T Consensus 171 ~--~gfvY~vS~~GvTG~~--~~~~~~---~~~~v~~vr~~~~-~pv~vG---fGI~~~e~~~~~~~~gADgvVVGSai 238 (267)
T 3vnd_A 171 G--EGYTYLLSRAGVTGTE--SKAGEP---IENILTQLAEFNA-PPPLLG---FGIAEPEQVRAAIKAGAAGAISGSAV 238 (267)
T ss_dssp C--CSCEEESCCCCCC----------C---HHHHHHHHHTTTC-CCEEEC---SSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred C--CCcEEEEecCCCCCCc--cCCcHH---HHHHHHHHHHhcC-CCEEEE---CCcCCHHHHHHHHHcCCCEEEECHHH
Confidence 2 1234443444433432 111222 3344444454432 122222 2333233344 788999999998643
No 61
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=93.43 E-value=2.5 Score=34.08 Aligned_cols=189 Identities=14% Similarity=0.066 Sum_probs=98.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhc--CceEEEeCCCCC--HHHHHHHHHhccCe
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTLGMLE--KHQAIELKKAGLTA 131 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~--~~~i~~~~g~l~--~e~l~~L~~aGld~ 131 (320)
.+.++.++.++.+.. |+..+.++.+ .....=.+.++.+++. +.++.......+ ...++.+.++|.|.
T Consensus 10 ~~~~~~~~~~~~~~~-~v~~iev~~~--------~~~~~g~~~i~~l~~~~~~~~i~~~l~~~di~~~~~~~a~~~Gad~ 80 (207)
T 3ajx_A 10 LSTEAALELAGKVAE-YVDIIELGTP--------LIKAEGLSVITAVKKAHPDKIVFADMKTMDAGELEADIAFKAGADL 80 (207)
T ss_dssp SCHHHHHHHHHHHGG-GCSEEEECHH--------HHHHHCTHHHHHHHHHSTTSEEEEEEEECSCHHHHHHHHHHTTCSE
T ss_pred CCHHHHHHHHHHhhc-cCCEEEECcH--------HHHhhCHHHHHHHHHhCCCCeEEEEEEecCccHHHHHHHHhCCCCE
Confidence 578898988888776 7887777432 2223334456666643 555443222223 34488999999999
Q ss_pred eccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCee-eeeeeeec-
Q 020848 132 YNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESV-PINALLAV- 209 (320)
Q Consensus 132 v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v-~~~~~~p~- 209 (320)
+.+.....+ +...+.++.+++.|..+.+.+. .-.|.++..+. +.+.+ .+.+ .+..+.|.
T Consensus 81 v~vh~~~~~------------~~~~~~~~~~~~~g~~~gv~~~--s~~~p~~~~~~---~~~~g--~d~v~~~~~~~~~~ 141 (207)
T 3ajx_A 81 VTVLGSADD------------STIAGAVKAAQAHNKGVVVDLI--GIEDKATRAQE---VRALG--AKFVEMHAGLDEQA 141 (207)
T ss_dssp EEEETTSCH------------HHHHHHHHHHHHHTCEEEEECT--TCSSHHHHHHH---HHHTT--CSEEEEECCHHHHT
T ss_pred EEEeccCCh------------HHHHHHHHHHHHcCCceEEEEe--cCCChHHHHHH---HHHhC--CCEEEEEecccccc
Confidence 987553321 1223445566677877533221 12255553332 23445 6677 33344332
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccChhHHHHHHHcCCceEeeCCccccCCCCChhHHHHHHHH
Q 020848 210 KGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKV 289 (320)
Q Consensus 210 ~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~~~~~~~~~~Gan~~~~~~~~~~~~~~~~~~~~~~i~~ 289 (320)
.|.. +. . +.++.. ... +..+.+.+ ++.++.....+.+||+.+..|..+... .++.+.++.+++
T Consensus 142 ~g~~-----~~-~-~~i~~~--~~~---~~pi~v~G---GI~~~~~~~~~~aGad~vvvGsaI~~~--~dp~~~~~~~~~ 204 (207)
T 3ajx_A 142 KPGF-----DL-N-GLLAAG--EKA---RVPFSVAG---GVKVATIPAVQKAGAEVAVAGGAIYGA--ADPAAAAKELRA 204 (207)
T ss_dssp STTC-----CT-H-HHHHHH--HHH---TSCEEEES---SCCGGGHHHHHHTTCSEEEESHHHHTS--SSHHHHHHHHHH
T ss_pred cCCC-----ch-H-HHHHHh--hCC---CCCEEEEC---CcCHHHHHHHHHcCCCEEEEeeeccCC--CCHHHHHHHHHH
Confidence 2321 12 1 222211 111 22233333 233333456689999999888644332 346666655554
No 62
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=92.54 E-value=3.7 Score=34.41 Aligned_cols=129 Identities=19% Similarity=0.149 Sum_probs=88.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeC---------CCCCHHHHHHHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTL---------GMLEKHQAIELKK 126 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~---------g~l~~e~l~~L~~ 126 (320)
+++..+.+.++.+- .-++-+.|++|+.... ..+.+.+.++.+++.|+.+..-. | .-++.++..++
T Consensus 23 lg~~~~~d~Le~~g-~yID~lKfg~Gt~~l~----~~~~l~eki~l~~~~gV~v~~GGTl~E~~~~qg-~~~~yl~~~k~ 96 (251)
T 1qwg_A 23 LPPKFVEDYLKVCG-DYIDFVKFGWGTSAVI----DRDVVKEKINYYKDWGIKVYPGGTLFEYAYSKG-KFDEFLNECEK 96 (251)
T ss_dssp CCHHHHHHHHHHHG-GGCSEEEECTTGGGGS----CHHHHHHHHHHHHTTTCEEEECHHHHHHHHHTT-CHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhh-hhcceEEecCceeeec----CHHHHHHHHHHHHHcCCeEECCcHHHHHHHHcC-cHHHHHHHHHH
Confidence 77777766665432 3478888887643221 23448888888888888764321 3 45888999999
Q ss_pred hccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEe-------CCCHHHHHHHHHHHhcCCCCCC
Q 020848 127 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL-------GEAEEDRVGLLHTLATLPTHPE 199 (320)
Q Consensus 127 aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl-------get~ed~~~~l~~l~~l~~~~~ 199 (320)
.|++.|-+|--+. .-+.+++.+.|+.+++.|+++-+.+ |. -.+.+++.+.++.-.+-| .+
T Consensus 97 lGf~~iEiS~G~i---------~l~~~~~~~~I~~~~~~G~~v~~Ev--G~k~~~~~~~~~~~~~I~~~~~~LeAG--A~ 163 (251)
T 1qwg_A 97 LGFEAVEISDGSS---------DISLEERNNAIKRAKDNGFMVLTEV--GKKMPDKDKQLTIDDRIKLINFDLDAG--AD 163 (251)
T ss_dssp HTCCEEEECCSSS---------CCCHHHHHHHHHHHHHTTCEEEEEE--CCSSHHHHTTCCHHHHHHHHHHHHHHT--CS
T ss_pred cCCCEEEECCCcc---------cCCHHHHHHHHHHHHHCCCEEeeec--cccCCcccCCCCHHHHHHHHHHHHHCC--Cc
Confidence 9999999975332 3467888999999999999874432 33 135677777777777777 55
Q ss_pred eeee
Q 020848 200 SVPI 203 (320)
Q Consensus 200 ~v~~ 203 (320)
.|-+
T Consensus 164 ~Vii 167 (251)
T 1qwg_A 164 YVII 167 (251)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5443
No 63
>3e02_A Uncharacterized protein DUF849; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.90A {Burkholderia xenovorans LB400}
Probab=92.41 E-value=5.1 Score=34.85 Aligned_cols=232 Identities=13% Similarity=0.160 Sum_probs=126.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCC-CCCCc-hhHHHHHHHHHHhh-hcCceEEEeCC-C--C-CHHHHHHHHHhc
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRD-TIGRK-TNFNQILEYVKDIR-DMGMEVCCTLG-M--L-EKHQAIELKKAG 128 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~-~~ge~-~~~~~l~~~i~~~k-~~~~~i~~~~g-~--l-~~e~l~~L~~aG 128 (320)
+++|||.+.+....+.|..-+++-. +. ..|.| ...+.+.+++..++ ..++-+..|.| . . .++.+..+.+..
T Consensus 29 vTpeEia~~A~~~~~AGAaivHlHv--Rdp~dG~ps~d~~~~~e~~~~IR~~~d~iI~~TTgg~~~~~~eerla~~~~~~ 106 (311)
T 3e02_A 29 ITPEEIVKEGVAAAEAGAAMLHLHA--RDPLNGRPSQDPDLFMRFLPQLKERTDAILNITTGGGLGMSLDERLAPARAAR 106 (311)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEEECE--ECTTTCCEECCHHHHTTTHHHHHHHCCCEEEECSSCSTTCCHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEee--cCCCCCCcCCCHHHHHHHHHHHHHhCCcEEEECCCCCCCCCHHHHHHHHHhcC
Confidence 8999999999999999998888743 33 12334 34455666666666 34555544443 2 2 355666666655
Q ss_pred cCeeccCcccc------------------H-HHHhhhCC---CCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHH
Q 020848 129 LTAYNHNLDTS------------------R-EFYSKIIT---TRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVG 186 (320)
Q Consensus 129 ld~v~i~let~------------------~-~~~~~i~~---~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~ 186 (320)
-|..+++.-+. + ..+..-.. ..+++.+.+.++.+.+.|++....+ + +..++..
T Consensus 107 Pe~aSln~gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~d~v~~n~~~~i~~~~~~~~e~Gi~pE~e~-f----d~g~l~~ 181 (311)
T 3e02_A 107 PEVASMNMGSLNFNISQAAAKFDTFKFDWERPYLAGTRDFILSNTFSQIERGMTELGASGTRFEFEC-Y----DVGHLYN 181 (311)
T ss_dssp CSEEEEECSCEECBCGGGGGGCSCCSSTTHHHHHHHGGGCEECCCHHHHHHHHHHHHTTTCEEEEEE-C----SHHHHHH
T ss_pred CCeeeecCCCceeccccchhhccccccccchhhcccCCCceecCCHHHHHHHHHHHHHcCCeEEEEE-E----cHHHHHH
Confidence 55444332111 1 01111011 3467788888999999998765442 2 4456655
Q ss_pred HHHHHhcCCCCCCeeeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCC-ceeecC-CcccccChhHHHHHHHcCCc
Q 020848 187 LLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPK-AMVRLS-AGRVRFSMPEQALCFLAGAN 264 (320)
Q Consensus 187 ~l~~l~~l~~~~~~v~~~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~-~~i~~~-~g~~~~~~~~~~~~~~~Gan 264 (320)
...++++ |.-...+. ..|+- |-+.. -+.+++.+..+++.+..++|. ....+. -|+.. -+....++..|.|
T Consensus 182 ~~~l~~~-Gl~~~p~~-~~~vl--Gv~~g--~~~~~~~L~~~~~~~~~~~~~~~~wsv~~~Gr~~--~p~~~~A~~~GGh 253 (311)
T 3e02_A 182 LAHFVDR-KLVEPPFF-LQCVF--GILGG--IGADPENLLHMRTIADRLFGQDYYLSVLAAGRHQ--MPFVTMSAILGGN 253 (311)
T ss_dssp HHHHHHT-TSSCSCEE-EEEEE--CCBTS--CCSCHHHHHHHHHHHHHHHTTSEEEEEEECGGGH--HHHHHHHHHTTCE
T ss_pred HHHHHHc-CCCCCCeE-EEEEe--cCCCC--CCCCHHHHHHHHHHHHhhCCCCCceEEEeeChhh--HHHHHHHHHcCCC
Confidence 5555543 32111222 22322 32222 245677777766665444553 322222 12111 1234566777887
Q ss_pred eEee-CCccccCCC-------CChhHHHHHHHHcCCCcCCCCCCcC
Q 020848 265 SIFT-GEKLLTTPN-------NDFDADQLMFKVLGLTPKAPSFHEG 302 (320)
Q Consensus 265 ~~~~-~~~~~~~~~-------~~~~~~~~~i~~~G~~p~~~~~~~~ 302 (320)
.-+. +|.+....| .-+++.+++++++|+.|...+.-+.
T Consensus 254 vRVGlEDnl~~~~G~lA~sNaelV~~~~~i~~~lgr~vATp~EAR~ 299 (311)
T 3e02_A 254 VRVGLEDSLYSGKGQLATSNAEQVRKIRRIIEELSLDIATPDEARA 299 (311)
T ss_dssp EEESTTTCSEEETTEECSCHHHHHHHHHHHHHHTTCCBCCHHHHHH
T ss_pred eEEccCcceecCCCCCCCCHHHHHHHHHHHHHHcCCCCCCHHHHHH
Confidence 4332 232222222 2377888999999999987654333
No 64
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=92.29 E-value=0.54 Score=41.20 Aligned_cols=77 Identities=14% Similarity=0.167 Sum_probs=49.0
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecccCCCC---CCchhHHHHHHHHHHhhhc--CceEEEeCCCCCHHHHHHHHHhcc
Q 020848 55 LMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTI---GRKTNFNQILEYVKDIRDM--GMEVCCTLGMLEKHQAIELKKAGL 129 (320)
Q Consensus 55 ~~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~---ge~~~~~~l~~~i~~~k~~--~~~i~~~~g~l~~e~l~~L~~aGl 129 (320)
+.+.+.+++.++.+.+.|.+-|-++|-.+-++ .+...++.+...|+.+++. ++.+++ .....+.++.-.++|.
T Consensus 61 ~~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~vpISI--DT~~~~VaeaAl~aGa 138 (318)
T 2vp8_A 61 TFSDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLISV--DTWRAQVAKAACAAGA 138 (318)
T ss_dssp ---CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTCEEEE--ECSCHHHHHHHHHHTC
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCeEEE--eCCCHHHHHHHHHhCC
Confidence 36789999999999999999888876322222 1123456677778887743 665544 4466788888778887
Q ss_pred Ceec
Q 020848 130 TAYN 133 (320)
Q Consensus 130 d~v~ 133 (320)
+-|+
T Consensus 139 ~iIN 142 (318)
T 2vp8_A 139 DLIN 142 (318)
T ss_dssp CEEE
T ss_pred CEEE
Confidence 7554
No 65
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=92.26 E-value=12 Score=38.77 Aligned_cols=215 Identities=13% Similarity=0.023 Sum_probs=121.3
Q ss_pred CCHHHHHHHHHHHHHc--CCCEEEEecccCCCCCCchhHHHHHHHHHHhhhc--Cce--EEEe--C--CC--C----CHH
Q 020848 56 MTKDAVMQAAQKAKEA--GSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GME--VCCT--L--GM--L----EKH 119 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~--g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~--~~~--i~~~--~--g~--l----~~e 119 (320)
++.++.++.++.+.+. |+..+-..||.....+-|...++=.+.++.+++. +.. .+.. | |. . .++
T Consensus 552 ~~~~~kl~ia~~L~~~~~G~~~lE~~Gga~~e~~~~~~~e~~~e~l~~l~~~~~~~~~~~l~R~~n~vgy~~~pd~v~~~ 631 (1150)
T 3hbl_A 552 VRTKDMINIASKTADVFKDGFSLEMWGGATFDVAYNFLKENPWERLERLRKAIPNVLFQMLLRASNAVGYKNYPDNVIHK 631 (1150)
T ss_dssp CCHHHHHHHHHHHHHHTTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCCSSEEEEEEETTTBTCSSCCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhCCCcEEeecCCceEEecccccCCCHHHHHHHHHHhCCCCeEEEEeccccccccccCCchhHHH
Confidence 7899999999998887 8888876544222111011111223344444421 233 3332 1 21 1 355
Q ss_pred HHHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEE---e------CCCHHHHHHHHHH
Q 020848 120 QAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIG---L------GEAEEDRVGLLHT 190 (320)
Q Consensus 120 ~l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~G---l------get~ed~~~~l~~ 190 (320)
.++...++|+|.+.+..-.. +.......++.+++.|..+...+.+- + ..+.+.+.++++.
T Consensus 632 ~v~~a~~~Gvd~irif~~~s-----------d~~~~~~~~~~~~e~g~~~~~~i~~~~~~~~pe~~~~~~~~~~~~~a~~ 700 (1150)
T 3hbl_A 632 FVQESAKAGIDVFRIFDSLN-----------WVDQMKVANEAVQEAGKISEGTICYTGDILNPERSNIYTLEYYVKLAKE 700 (1150)
T ss_dssp HHHHHHHTTCCEEEEECTTC-----------CGGGGHHHHHHHHHTTCEEEEEEECCSCTTCTTTCSSSSHHHHHHHHHH
T ss_pred HHHHHHhCCcCEEEEEeeCC-----------HHHHHHHHHHHHHHHhhheeEEEeecccccChhhcCCCCHHHHHHHHHH
Confidence 68888899999988754222 12222456677778887665555442 1 1356778899999
Q ss_pred HhcCCCCCCeeeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCC-cccccChhHHHHHHHcCCceEeeC
Q 020848 191 LATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSA-GRVRFSMPEQALCFLAGANSIFTG 269 (320)
Q Consensus 191 l~~l~~~~~~v~~~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~-g~~~~~~~~~~~~~~~Gan~~~~~ 269 (320)
+.++| ++.+.+ ++|. ....+.+..+++...+..+ +..+.+-+ ...++.-.....++.+||+.+-..
T Consensus 701 ~~~~G--a~~i~l------~Dt~----G~~~P~~~~~lv~~l~~~~-~~~i~~H~Hnt~G~a~An~laA~~aGa~~vD~a 767 (1150)
T 3hbl_A 701 LEREG--FHILAI------KDMA----GLLKPKAAYELIGELKSAV-DLPIHLHTHDTSGNGLLTYKQAIDAGVDIIDTA 767 (1150)
T ss_dssp HHHTT--CSEEEE------EETT----CCCCHHHHHHHHHHHHHHC-CSCEEEEECBTTSCHHHHHHHHHHTTCSEEEEB
T ss_pred HHHcC--CCeeeE------cCcc----CCCCHHHHHHHHHHHHHhc-CCeEEEEeCCCCcHHHHHHHHHHHhCCCEEEEe
Confidence 99998 555443 2221 2355777888887776655 32222210 001111223456889999987221
Q ss_pred -Cccc-cCCCCChhHHHHHHHHcCCCc
Q 020848 270 -EKLL-TTPNNDFDADQLMFKVLGLTP 294 (320)
Q Consensus 270 -~~~~-~~~~~~~~~~~~~i~~~G~~p 294 (320)
.++- .++.++.++++.+++..|+.+
T Consensus 768 i~GlG~~~gn~~lE~lv~~L~~~g~~t 794 (1150)
T 3hbl_A 768 VASMSGLTSQPSANSLYYALNGFPRHL 794 (1150)
T ss_dssp CGGGCSBTSCCBHHHHHHHTTTSSCCB
T ss_pred ccccCCCCCCccHHHHHHHHHhcCCCc
Confidence 0121 234467788888888777654
No 66
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=92.25 E-value=0.87 Score=37.33 Aligned_cols=199 Identities=14% Similarity=0.143 Sum_probs=92.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEec--ccCCCCCCchhHHHHHHHHHHhhhc-CceEEEeCCCCC-HHHHHHHHHhccCee
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCMGA--AWRDTIGRKTNFNQILEYVKDIRDM-GMEVCCTLGMLE-KHQAIELKKAGLTAY 132 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l~~--g~~~~~ge~~~~~~l~~~i~~~k~~-~~~i~~~~g~l~-~e~l~~L~~aGld~v 132 (320)
++..+.+.++.+.+.|++.+.+.- |.. +.....-.+.++.+++. +.++.+.....+ ++.++.+.++|+|.+
T Consensus 14 D~~~~~~~~~~~~~~G~~~i~~~~~dg~~-----~~~~~~g~~~i~~i~~~~~~~~~v~l~v~d~~~~i~~~~~~gad~v 88 (220)
T 2fli_A 14 DYANFASELARIEETDAEYVHIDIMDGQF-----VPNISFGADVVASMRKHSKLVFDCHLMVVDPERYVEAFAQAGADIM 88 (220)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEEEEBSSS-----SSCBCBCHHHHHHHHTTCCSEEEEEEESSSGGGGHHHHHHHTCSEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeecCCC-----CCccccCHHHHHHHHHhCCCCEEEEEeecCHHHHHHHHHHcCCCEE
Confidence 445666677777778988866542 210 11111113455555533 444433322222 235799999999999
Q ss_pred ccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeeeeeeecCCC
Q 020848 133 NHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGT 212 (320)
Q Consensus 133 ~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~~~p~~gt 212 (320)
.+..+.. ... .+.++.+++.|..+...+ ...+..+. ++.+.. ..+.+-+....| |.
T Consensus 89 ~vh~~~~----------~~~---~~~~~~~~~~g~~i~~~~---~~~t~~e~---~~~~~~---~~d~vl~~~~~~--g~ 144 (220)
T 2fli_A 89 TIHTEST----------RHI---HGALQKIKAAGMKAGVVI---NPGTPATA---LEPLLD---LVDQVLIMTVNP--GF 144 (220)
T ss_dssp EEEGGGC----------SCH---HHHHHHHHHTTSEEEEEE---CTTSCGGG---GGGGTT---TCSEEEEESSCT--TC
T ss_pred EEccCcc----------ccH---HHHHHHHHHcCCcEEEEE---cCCCCHHH---HHHHHh---hCCEEEEEEECC--CC
Confidence 8865331 222 244455566676643332 22232222 111111 145554434433 22
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccChhHHHHHHHcCCceEeeCCccccCCCCChhHHHHHHHH
Q 020848 213 PLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKV 289 (320)
Q Consensus 213 ~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~~~~~~~~~~Gan~~~~~~~~~~~~~~~~~~~~~~i~~ 289 (320)
.-....+...+++.++.+.......+..+-+.+| +.++.......+|++.++.|..+... .++.+.++.+++
T Consensus 145 ~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v~GG---I~~~~~~~~~~~Gad~vvvGsai~~~--~d~~~a~~~~~~ 216 (220)
T 2fli_A 145 GGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGG---VDNKTIRACYEAGANVFVAGSYLFKA--SDLVSQVQTLRT 216 (220)
T ss_dssp SSCCCCGGGHHHHHHHHHHHHHTTCCCEEEEESS---CCTTTHHHHHHHTCCEEEESHHHHTS--SCHHHHHHHHHH
T ss_pred cccccCHHHHHHHHHHHHHHHhcCCCceEEEECc---CCHHHHHHHHHcCCCEEEEChHHhCC--CCHHHHHHHHHH
Confidence 2111111112222111111111111223333433 22232344667799999998754432 456666666654
No 67
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=91.93 E-value=6.7 Score=35.15 Aligned_cols=179 Identities=16% Similarity=0.126 Sum_probs=105.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCCCC----C---C----------------chhHHHHHHHHHHhhhcCceEEEeC
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTI----G---R----------------KTNFNQILEYVKDIRDMGMEVCCTL 113 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l~~g~~~~~----g---e----------------~~~~~~l~~~i~~~k~~~~~i~~~~ 113 (320)
+.|.+.+.++.+++.|++-+-+|.-...+. . . .+..+.+.++.+..++.|+.+.++
T Consensus 42 sle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~~~L~~~~~~~Gi~~~st- 120 (385)
T 1vli_A 42 KLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYCREKQVIFLST- 120 (385)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGGHHHHHHHHHHTTCEEECB-
T ss_pred cHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHHHHHHHHHHHHcCCcEEEc-
Confidence 789999999999999999998875422220 0 0 012344555555566778886554
Q ss_pred CCCCHHHHHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeC-CCHHHHHHHHHHHh
Q 020848 114 GMLEKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLG-EAEEDRVGLLHTLA 192 (320)
Q Consensus 114 g~l~~e~l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glg-et~ed~~~~l~~l~ 192 (320)
.++.+.++.|.+.|++.+.|+--. -.+ +.-++.+.+.|.++ ++-.| -|.+|+...++++.
T Consensus 121 -pfD~~svd~l~~~~vd~~KIgS~~----------~~N----~pLL~~va~~gKPV----iLStGmaTl~Ei~~Ave~i~ 181 (385)
T 1vli_A 121 -VCDEGSADLLQSTSPSAFKIASYE----------INH----LPLLKYVARLNRPM----IFSTAGAEISDVHEAWRTIR 181 (385)
T ss_dssp -CCSHHHHHHHHTTCCSCEEECGGG----------TTC----HHHHHHHHTTCSCE----EEECTTCCHHHHHHHHHHHH
T ss_pred -cCCHHHHHHHHhcCCCEEEECccc----------ccC----HHHHHHHHhcCCeE----EEECCCCCHHHHHHHHHHHH
Confidence 478899999988888888775200 012 34466666667664 33232 38999999999999
Q ss_pred cCCCCCCeeeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccC-hhHHHHHHHcCCceE
Q 020848 193 TLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFS-MPEQALCFLAGANSI 266 (320)
Q Consensus 193 ~l~~~~~~v~~~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~-~~~~~~~~~~Gan~~ 266 (320)
..| ...+.+.. -+.+ + |.+..+--++.+..++..+|...+-.+. -..+ ......++..||+-+
T Consensus 182 ~~G--n~~iiLlh--c~s~---Y--Ptp~~~~nL~aI~~Lk~~f~~lpVG~Sd--Ht~G~~~~~~AAvAlGA~iI 245 (385)
T 1vli_A 182 AEG--NNQIAIMH--CVAK---Y--PAPPEYSNLSVIPMLAAAFPEAVIGFSD--HSEHPTEAPCAAVRLGAKLI 245 (385)
T ss_dssp TTT--CCCEEEEE--ECSS---S--SCCGGGCCTTHHHHHHHHSTTSEEEEEE--CCSSSSHHHHHHHHTTCSEE
T ss_pred HCC--CCcEEEEe--ccCC---C--CCChhhcCHHHHHHHHHHcCCCCEEeCC--CCCCchHHHHHHHHcCCCEE
Confidence 887 33444432 1111 1 1111111244455566666433232221 0122 345567788899955
No 68
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=91.81 E-value=2.6 Score=36.83 Aligned_cols=77 Identities=16% Similarity=0.204 Sum_probs=51.9
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc----hhHHHHHHHHHHhhh-cCceEEEeCCCCCHHHHHHHHHhcc
Q 020848 55 LMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK----TNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAGL 129 (320)
Q Consensus 55 ~~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~----~~~~~l~~~i~~~k~-~~~~i~~~~g~l~~e~l~~L~~aGl 129 (320)
+.+++.+++.++.+.+.|+.-|-+++-.+-++.++ ..++.+...|+.+++ .++.+++ .....+.++.-.++|.
T Consensus 29 ~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~~vpiSI--DT~~~~Va~aAl~aGa 106 (314)
T 2vef_A 29 FFALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKESDVLISI--DTWKSQVAEAALAAGA 106 (314)
T ss_dssp -CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHCCCEEEE--ECSCHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhCCceEEE--eCCCHHHHHHHHHcCC
Confidence 36899999999999999999888877332222211 345677788888874 3665543 3466777777777787
Q ss_pred Ceec
Q 020848 130 TAYN 133 (320)
Q Consensus 130 d~v~ 133 (320)
+-|+
T Consensus 107 ~iIN 110 (314)
T 2vef_A 107 DLVN 110 (314)
T ss_dssp CEEE
T ss_pred CEEE
Confidence 7665
No 69
>3lot_A Uncharacterized protein; protein of unknown function, structural genomics, joint CENT structural genomics, JCSG; HET: MSE; 1.89A {Archaeoglobus fulgidus}
Probab=91.25 E-value=7 Score=34.04 Aligned_cols=231 Identities=17% Similarity=0.188 Sum_probs=125.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCC-CCCc-hhHHHHHHHHHHhhh-cCceEEEeCCC---C--C-HHHHHHHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDT-IGRK-TNFNQILEYVKDIRD-MGMEVCCTLGM---L--E-KHQAIELKK 126 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~-~ge~-~~~~~l~~~i~~~k~-~~~~i~~~~g~---l--~-~e~l~~L~~ 126 (320)
+++|||.+.+....+.|..-+++-. +.+ .|.| ...+.+.+++..+++ .++-+..|.|- . + ++.+.-+.+
T Consensus 29 vTpeEia~~A~~~~~AGAaivHlHv--Rdp~dG~ps~d~~~y~e~i~~IR~~~d~iI~~TTgg~~~~~~~~eeR~~~~~~ 106 (314)
T 3lot_A 29 VTPDQIVEEAVKAAEAGAGMVHIHA--RDPKDGRPTTDVEVFRYICREIKKQSDVVINVTTGGGGTLGIPVEERAKVVPA 106 (314)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEEECE--ECTTTCCEECCHHHHHHHHHHHHHHCCCEEEECSSTTGGGTCCHHHHTTHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEee--cCCCCCCcCCCHHHHHHHHHHHHhcCCeEEEeCCCCcCCCCCCHHHHHHHHHh
Confidence 8999999999999999998888733 332 2334 344556666666663 46666665542 2 3 344555555
Q ss_pred hccCeeccCcccc------------------HHHH-----hhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHH
Q 020848 127 AGLTAYNHNLDTS------------------REFY-----SKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEED 183 (320)
Q Consensus 127 aGld~v~i~let~------------------~~~~-----~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed 183 (320)
..-+..+++.=|. +..| +.+- ..+++.+.+.++.+.+.|++...-+ + +..+
T Consensus 107 ~~Pe~aSln~Gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~~~v~-~N~~~~i~~~~~~~~e~Gi~pE~e~-f----d~g~ 180 (314)
T 3lot_A 107 LKPEIATFNMGSMNFAIHPLLKKYKEFKYDWEPEYLEMTRDIVF-RNTFKDLEALSRIFKENDTKPELEC-Y----DIGQ 180 (314)
T ss_dssp HCCSEEEEECCCEECBCTTHHHHCCCCSSTHHHHHHHHGGGCEE-CCCHHHHHHHHHHHHHHTCEEEEEE-C----SHHH
T ss_pred cCCceeeecCCCcccccccccccccccccccchhhcccCCCcee-cCCHHHHHHHHHHHHHcCCEEEEEE-E----CHHH
Confidence 5445444332111 1111 1111 2478888888999999998764432 2 4455
Q ss_pred HHHHHHHHhcCCCCCCeeeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCC--CceeecCCcccccChhHHHHHHHc
Q 020848 184 RVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMP--KAMVRLSAGRVRFSMPEQALCFLA 261 (320)
Q Consensus 184 ~~~~l~~l~~l~~~~~~v~~~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p--~~~i~~~~g~~~~~~~~~~~~~~~ 261 (320)
+.....+++ .|.-.....+ .|+- |-+.. -+.+++.+.-+++.+..+++ +..+.+. +.....-+....++..
T Consensus 181 l~~~~~l~~-~Gll~~p~~~-~~Vl--Gv~~G--~~~~p~~L~~~~~~~~~l~~~~~~~Wsv~-g~Gr~q~p~~~~A~~~ 253 (314)
T 3lot_A 181 IYNTAFMFH-EGYLEPPLRL-QFIH--GILGG--IGTAVEDVLFMKQTADRLIGRENYTWSLV-GAGRFQMPLGTLAVIM 253 (314)
T ss_dssp HHHHHHHHH-TTCSCSSEEE-EEEE--CCBTS--CCCCHHHHHHHHHHHHHHTCGGGEEEEEE-ECGGGHHHHHHHHHHT
T ss_pred HHHHHHHHH-CCCCCCCceE-EEEe--cCCCC--CCCCHHHHHHHHHHhhhccCCCCCeEEEE-ecChhhHHHHHHHHHc
Confidence 555555444 3421111222 2221 22222 24567777777766655555 3222222 1111111334567778
Q ss_pred CCceEee-CCccccCCC-------CChhHHHHHHHHcCCCcCCCCCCc
Q 020848 262 GANSIFT-GEKLLTTPN-------NDFDADQLMFKVLGLTPKAPSFHE 301 (320)
Q Consensus 262 Gan~~~~-~~~~~~~~~-------~~~~~~~~~i~~~G~~p~~~~~~~ 301 (320)
|.|.-+. +|.+....| .-+++.+++++++|+.|...+.-+
T Consensus 254 GGhvRVGlEDnl~~~~G~lA~sNa~lV~~~~~i~~~lGr~vATp~EAR 301 (314)
T 3lot_A 254 GGDVRVGLEDSLYIERGKLAKSNAEQVEKMVRIVKELGKRPATPDEVR 301 (314)
T ss_dssp TCEEEESTTTCSEEETTEECSCHHHHHHHHHHHHHHTTCEECCHHHHH
T ss_pred CCceEEccCcccccCCCCCCCCHHHHHHHHHHHHHHcCCCCCCHHHHH
Confidence 8874332 232222222 237888899999999988764433
No 70
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha}
Probab=91.09 E-value=6.6 Score=33.49 Aligned_cols=225 Identities=13% Similarity=0.076 Sum_probs=119.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc-hhHHHHHHHHHHhhh-c-CceEEEeCCC---CCHHHHHHHHHhcc
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK-TNFNQILEYVKDIRD-M-GMEVCCTLGM---LEKHQAIELKKAGL 129 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~-~~~~~l~~~i~~~k~-~-~~~i~~~~g~---l~~e~l~~L~~aGl 129 (320)
+++|||.+.+....+.|..-+++-- +.+.|.| ...+.+.+++..+++ . ++-+..|.|- ..++. ..+.+..-
T Consensus 27 vTpeEia~~A~~~~~AGAaivHlHv--Rd~~G~~s~d~~~~~e~~~~IR~~~pd~ii~~Ttg~~~~~~e~R-~~~~~~~P 103 (275)
T 3no5_A 27 ITVSEQVESTQAAFEAGATLVHLHV--RNDDETPTSNPDRFALVLEGIRKHAPGMITQVSTGGRSGAGNER-GAMLSLRP 103 (275)
T ss_dssp CSHHHHHHHHHHHHHHTCCEEEECE--ECTTSCEECCHHHHHHHHHHHHHHSTTCEEEECCCCCTTCCGGG-GTTGGGCC
T ss_pred CCHHHHHHHHHHHHHccCcEEEEee--cCCCCCcCCCHHHHHHHHHHHHHhCCCeEEEeCCCCCCCCHHHH-hhHhhcCC
Confidence 8999999999999999998888733 3333444 345567777777774 3 6666666653 11222 22223333
Q ss_pred CeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeeeeeeec
Q 020848 130 TAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAV 209 (320)
Q Consensus 130 d~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~~~p~ 209 (320)
|..+++.-|.. .-+.+- ..+++...+.++.+.+.|++....+ + +..++.....++++ |.-...+.+ .|+-
T Consensus 104 e~aSl~~gs~N-f~~~v~-~N~~~~~~~~~~~~~e~Gi~pE~e~-f----d~g~l~~~~~l~~~-Gl~~~p~~~-~~vl- 173 (275)
T 3no5_A 104 DMASLATGSVN-FPTRVY-DNPPELVDWLAAEMKTYGIKPEVEA-F----DLSMIFQAAAMQAA-GAIVGPLHI-QFVM- 173 (275)
T ss_dssp SEEEEECSCEE-CSSSEE-CCCHHHHHHHHHHHHHTTCEEEEEE-S----STHHHHHHHHHHHH-TSSCSSCEE-EEEE-
T ss_pred CEEEecCcccc-cccccc-cCCHHHHHHHHHHHHHcCCeeEEEE-E----cHHHHHHHHHHHHC-CCCCCCeeE-EEEe-
Confidence 44443332210 000111 2467888888999999998765442 2 33455555444443 310111222 2222
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCC-cccccChhHHHHHHHcCCceEee-CCccccCCC---C----Ch
Q 020848 210 KGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSA-GRVRFSMPEQALCFLAGANSIFT-GEKLLTTPN---N----DF 280 (320)
Q Consensus 210 ~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~-g~~~~~~~~~~~~~~~Gan~~~~-~~~~~~~~~---~----~~ 280 (320)
|-+.. .+.+++.+..++...+.+-++..+.+.+ |+.. -+....++..|.+.-+. +|.+....| + -+
T Consensus 174 -Gv~~g--~~~~~~~l~~~~~~l~~~~~~~~w~v~g~Gr~~--~p~~~~A~~~GGhvRVGlEDnl~~~~G~~A~sNa~lV 248 (275)
T 3no5_A 174 -GIKNA--MPVDREVLEFYVQTLKRLSPDATWTGAGIGRHQ--LTMARWSLELGGHCRTGLEDNVRLDKNTLAPSNAALV 248 (275)
T ss_dssp -CCTTS--CCCCHHHHHHHHHHHHHHCTTCEEEEEECGGGH--HHHHHHHHHHTCEEEESTTTCCBSSSSCBCSCHHHHH
T ss_pred -CCCCC--CCCCHHHHHHHHHHHHhCCCCCeEEEEecCHhh--HHHHHHHHHhCCCeEEcCCcceeCCCCCCCCCHHHHH
Confidence 32222 2356666666655554333443332221 1111 12335567778874332 233322233 1 37
Q ss_pred hHHHHHHHHcCCCcCCCC
Q 020848 281 DADQLMFKVLGLTPKAPS 298 (320)
Q Consensus 281 ~~~~~~i~~~G~~p~~~~ 298 (320)
++.+++++++|+.|...+
T Consensus 249 ~~~~~i~~~~gr~vAtp~ 266 (275)
T 3no5_A 249 RQVAELCEEYGRPVATAA 266 (275)
T ss_dssp HHHHHHHHHTTCCBCCHH
T ss_pred HHHHHHHHHcCCCCCCHH
Confidence 788899999999998653
No 71
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=90.95 E-value=2.1 Score=36.08 Aligned_cols=113 Identities=12% Similarity=0.122 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeCC----CCCHHHHHHHHHhccCeec
Q 020848 58 KDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLG----MLEKHQAIELKKAGLTAYN 133 (320)
Q Consensus 58 ~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g----~l~~e~l~~L~~aGld~v~ 133 (320)
.+.+.+.++.+++.|++.|+|+-= ...| ....+.+.++++..+ ++++..+-. .-..+.++.|.+.|+++|.
T Consensus 72 ~~~M~~Di~~~~~~GadGvV~G~L--t~dg-~iD~~~~~~Li~~a~--~~~vTFHRAfD~~~d~~~ale~L~~lG~~rIL 146 (256)
T 1twd_A 72 FAAILEDVRTVRELGFPGLVTGVL--DVDG-NVDMPRMEKIMAAAG--PLAVTFHRAFDMCANPLYTLNNLAELGIARVL 146 (256)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCB--CTTS-SBCHHHHHHHHHHHT--TSEEEECGGGGGCSCHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeeE--CCCC-CcCHHHHHHHHHHhC--CCcEEEECchhccCCHHHHHHHHHHcCCCEEE
Confidence 344555667788899999998642 1123 356677777777665 455433321 1236679999999999987
Q ss_pred cCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHH
Q 020848 134 HNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLL 188 (320)
Q Consensus 134 i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l 188 (320)
-+=. ..+..+-+..++.+.+.. . .+.+|.|-|-+.+.+.+++
T Consensus 147 TSG~-----------~~~a~~g~~~L~~Lv~~a-~-~i~Im~GgGv~~~Ni~~l~ 188 (256)
T 1twd_A 147 TSGQ-----------KSDALQGLSKIMELIAHR-D-APIIMAGAGVRAENLHHFL 188 (256)
T ss_dssp ECTT-----------SSSTTTTHHHHHHHHTSS-S-CCEEEEESSCCTTTHHHHH
T ss_pred CCCC-----------CCCHHHHHHHHHHHHHhh-C-CcEEEecCCcCHHHHHHHH
Confidence 5411 111222244455554432 1 6778998887777766654
No 72
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=90.91 E-value=6.7 Score=33.22 Aligned_cols=186 Identities=12% Similarity=0.030 Sum_probs=97.1
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCCC-CCCchh-------------HHHHHHHHHHhhhc--CceEEE---eCCC--
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCMGAAWRDT-IGRKTN-------------FNQILEYVKDIRDM--GMEVCC---TLGM-- 115 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l~~g~~~~-~ge~~~-------------~~~l~~~i~~~k~~--~~~i~~---~~g~-- 115 (320)
+.++..+.++.+.+.|++.+.++.....+ ...|.. .....+.++.+++. ++++.. .+..
T Consensus 29 ~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~~ 108 (268)
T 1qop_A 29 GIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYANLVFN 108 (268)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEcccHHHH
Confidence 45788888999999999999886421111 111111 34566888888843 555422 1211
Q ss_pred -CCHHHHHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcC
Q 020848 116 -LEKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 194 (320)
Q Consensus 116 -l~~e~l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 194 (320)
-.++.++.++++|+|.+.+.-.. .++..+.++.+++.|++.. .++....+.+.+........
T Consensus 109 ~g~~~~~~~~~~aGadgii~~d~~-------------~e~~~~~~~~~~~~g~~~i--~l~~p~t~~~~i~~i~~~~~-- 171 (268)
T 1qop_A 109 NGIDAFYARCEQVGVDSVLVADVP-------------VEESAPFRQAALRHNIAPI--FICPPNADDDLLRQVASYGR-- 171 (268)
T ss_dssp TCHHHHHHHHHHHTCCEEEETTCC-------------GGGCHHHHHHHHHTTCEEE--CEECTTCCHHHHHHHHHHCC--
T ss_pred hhHHHHHHHHHHcCCCEEEEcCCC-------------HHHHHHHHHHHHHcCCcEE--EEECCCCCHHHHHHHHhhCC--
Confidence 12688999999999987774222 1333556677888887651 23322334444455444322
Q ss_pred CCCCCeeeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccC-hhHHHHHHHcCCceEeeCCcc
Q 020848 195 PTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFS-MPEQALCFLAGANSIFTGEKL 272 (320)
Q Consensus 195 ~~~~~~v~~~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~-~~~~~~~~~~Gan~~~~~~~~ 272 (320)
..+.+....-..|.. .+. .......++..|... +..+-+. .++. ++....++.+||+.++.|..+
T Consensus 172 ----g~v~~~s~~G~tG~~----~~~-~~~~~~~i~~lr~~~-~~pi~vg---gGI~t~e~~~~~~~agAD~vVVGSai 237 (268)
T 1qop_A 172 ----GYTYLLSRSGVTGAE----NRG-ALPLHHLIEKLKEYH-AAPALQG---FGISSPEQVSAAVRAGAAGAISGSAI 237 (268)
T ss_dssp ----SCEEEESSSSCCCSS----SCC---CCHHHHHHHHHTT-CCCEEEE---SSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred ----CcEEEEecCCcCCCc----cCC-CchHHHHHHHHHhcc-CCcEEEE---CCCCCHHHHHHHHHcCCCEEEEChHH
Confidence 122222221111221 111 112223344444443 2222222 2333 443345588999999999744
No 73
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=90.83 E-value=1.5 Score=36.64 Aligned_cols=74 Identities=12% Similarity=0.068 Sum_probs=52.2
Q ss_pred HHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHhccCeeccCccc
Q 020848 61 VMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDT 138 (320)
Q Consensus 61 i~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~let 138 (320)
..+.++.+.+.|++.+.+..-.....+.+. -.++++.++ ..++++..+.|..+.+.++.+.++|+|.|.++-..
T Consensus 37 ~~~~a~~~~~~G~~~i~v~d~~~~~~~~~~----~~~~i~~i~~~~~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~~ 111 (247)
T 3tdn_A 37 LRDWVVEVEKRGAGEILLTSIDRDGTKSGY----DTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLRGADKVSINTAA 111 (247)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTTTTCSSCC----CHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTTCSEECCSHHH
T ss_pred HHHHHHHHHHcCCCEEEEEecCcccCCCcc----cHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCeeehhhHH
Confidence 344556666799999998653222112222 245666766 45888889999999999999999999999987533
No 74
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=90.55 E-value=10 Score=35.86 Aligned_cols=221 Identities=13% Similarity=0.049 Sum_probs=117.8
Q ss_pred HHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh-hcCceEEEeCCCCCH-----------HHHHHHHH
Q 020848 59 DAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEK-----------HQAIELKK 126 (320)
Q Consensus 59 eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~-----------e~l~~L~~ 126 (320)
.+.++.++.+.+.|++.+++..-+-...+ +.......+.+++++ ...+++.+-.|..+. +.++++.+
T Consensus 280 ~dp~~~A~~~~~~Ga~~l~~~dl~~~~~~-~~~~~~~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~ 358 (555)
T 1jvn_A 280 GKPVQLAQKYYQQGADEVTFLNITSFRDC-PLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFR 358 (555)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEEEC---CC-CGGGCHHHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEEEeCCccccc-cCCCchHHHHHHHHHhhCCCcEEEeCccccchhcccccchHHHHHHHHHH
Confidence 47777888888899999887532111111 223334567777776 457777777777654 77999999
Q ss_pred hccCeeccCccccH---HHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeE------------------------------
Q 020848 127 AGLTAYNHNLDTSR---EFYSKIITTRSYDERLETLKHVREAGINVCSGG------------------------------ 173 (320)
Q Consensus 127 aGld~v~i~let~~---~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~------------------------------ 173 (320)
+|+|.|.++-.... +.++.-....+.+-+.+..+..-+..+-+.++.
T Consensus 359 aGad~V~igt~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ivv~iD~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 438 (555)
T 1jvn_A 359 SGADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISKAYGAQAVVISVDPKRVYVNSQADTKNKVFETEYPGPNGEKYCW 438 (555)
T ss_dssp HTCSEEEECHHHHHHHHHHHHTTSCCCSCSHHHHHHHHHCGGGEEEEECEEEEEESSGGGCSSCCEECSSCCTTCCCEEE
T ss_pred cCCCEEEECCHHhhCchhhccccccccCHHHHHHHHHHhCCCcEEEEEEccccccccccccccccccccccCCCCCccee
Confidence 99999998865542 222221111233222322222211112233332
Q ss_pred --EEEeCCC---HHHHHHHHHHHhcCCCCCCeeeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCccc
Q 020848 174 --IIGLGEA---EEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRV 248 (320)
Q Consensus 174 --i~Glget---~ed~~~~l~~l~~l~~~~~~v~~~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~ 248 (320)
++-.|.. .-+..+.++.+.++| ++.+-+... -..|+. ..++.+. ++.+. ...+-. +-.++|-.
T Consensus 439 ~~v~~~Gw~~~~~~~~~e~a~~~~~~G--a~~il~t~~-~~dG~~----~G~d~~l-i~~l~---~~~~iP-VIasGGi~ 506 (555)
T 1jvn_A 439 YQCTIKGGRESRDLGVWELTRACEALG--AGEILLNCI-DKDGSN----SGYDLEL-IEHVK---DAVKIP-VIASSGAG 506 (555)
T ss_dssp EEEEETTTTEEEEEEHHHHHHHHHHTT--CCEEEECCG-GGTTTC----SCCCHHH-HHHHH---HHCSSC-EEECSCCC
T ss_pred EEEEEecCccCCCCCHHHHHHHHHHcC--CCEEEEeCC-CCCCCC----CCCCHHH-HHHHH---HhCCcc-EEEECCCC
Confidence 1111221 123567788888888 555533221 122432 2234332 33222 222212 22233222
Q ss_pred ccChhHHHHHHH-cCCceEeeCCccccCCCCChhHHHHHHHHcCCCcC
Q 020848 249 RFSMPEQALCFL-AGANSIFTGEKLLTTPNNDFDADQLMFKVLGLTPK 295 (320)
Q Consensus 249 ~~~~~~~~~~~~-~Gan~~~~~~~~~~~~~~~~~~~~~~i~~~G~~p~ 295 (320)
+ .+.-...+. .|++.++.|. ....+..+..+..+.+++.|..+.
T Consensus 507 s--~~d~~~~~~~~G~~gvivg~-a~~~~~~~~~e~~~~l~~~gi~~r 551 (555)
T 1jvn_A 507 V--PEHFEEAFLKTRADACLGAG-MFHRGEFTVNDVKEYLLEHGLKVR 551 (555)
T ss_dssp S--HHHHHHHHHHSCCSEEEESH-HHHTTSCCHHHHHHHHHHTTCCCC
T ss_pred C--HHHHHHHHHhcCChHHHHHH-HHHcCCCCHHHHHHHHHHCCCccc
Confidence 2 222234444 6999999987 444556789999999999997543
No 75
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=90.49 E-value=7.7 Score=33.25 Aligned_cols=181 Identities=14% Similarity=0.188 Sum_probs=108.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeC----CCCC----HHHHHHHHHh
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTL----GMLE----KHQAIELKKA 127 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~----g~l~----~e~l~~L~~a 127 (320)
.+.++|.+.++++.+.|+..||+. |.+.+...+ .++..++.+.+-. |..+ ..+.+...+.
T Consensus 71 ~T~~dI~~lc~eA~~~g~aaVCV~---------P~~V~~a~~---~L~~s~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~~ 138 (288)
T 3oa3_A 71 ATGSQIDVLCAEAKEYGFATVCVR---------PDYVSRAVQ---YLQGTQVGVTCVIGFHEGTYSTDQKVSEAKRAMQN 138 (288)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEC---------GGGHHHHHH---HTTTSSCEEEEEESTTTSCSCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHhcCCcEEEEC---------HHHHHHHHH---HcCCCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHc
Confidence 688999999999999999999884 334444433 3344566654333 3222 2345556677
Q ss_pred ccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEe-CCCHHHHHHHHHHHhcCCCCCCeeeeeee
Q 020848 128 GLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL-GEAEEDRVGLLHTLATLPTHPESVPINAL 206 (320)
Q Consensus 128 Gld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl-get~ed~~~~l~~l~~l~~~~~~v~~~~~ 206 (320)
|.|.|.+-++-. .+ ...+|+.+.+-|+..++.--...+.+|+-. --+++++....+...+.| .+.|.-..
T Consensus 139 GAdEIDmVINig-----~l-k~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia~eaG--ADfVKTST- 209 (288)
T 3oa3_A 139 GASELDMVMNYP-----WL-SEKRYTDVFQDIRAVRLAAKDAILKVILETSQLTADEIIAGCVLSSLAG--ADYVKTST- 209 (288)
T ss_dssp TCSEEEEECCHH-----HH-HTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHTT--CSEEECCC-
T ss_pred CCCEEEEEeehh-----hh-cCCcHHHHHHHHHHHHHHhcCCCceEEEECCCCCHHHHHHHHHHHHHcC--CCEEEcCC-
Confidence 999887655331 11 135788888888877764212224445533 247888888888999998 66665532
Q ss_pred eecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccChhHHHHHHHcCCceE
Q 020848 207 LAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSI 266 (320)
Q Consensus 207 ~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~~~~~~~~~~Gan~~ 266 (320)
-+. ....+.++...+.+..+..-+...+..++|--. .+.....+.+||+++
T Consensus 210 ------Gf~-~~GAT~edv~lmr~~v~~~g~~v~VKAAGGIrt--~edAl~mi~aGA~Ri 260 (288)
T 3oa3_A 210 ------GFN-GPGASIENVSLMSAVCDSLQSETRVKASGGIRT--IEDCVKMVRAGAERL 260 (288)
T ss_dssp ------SSS-SCCCCHHHHHHHHHHHHHSSSCCEEEEESSCCS--HHHHHHHHHTTCSEE
T ss_pred ------CCC-CCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCC--HHHHHHHHHcCCcee
Confidence 221 134556664444443333234555666655322 234456788999987
No 76
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=90.41 E-value=1.1 Score=39.55 Aligned_cols=80 Identities=13% Similarity=0.014 Sum_probs=54.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHhc-cCeec
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAG-LTAYN 133 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~aG-ld~v~ 133 (320)
.+.++..+.++.+.+.|+..+.+.++.......+.....-.+.++.++ ..++++..+.|..+.+.++++.+.| +|.|.
T Consensus 226 ~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~ 305 (338)
T 1z41_A 226 LDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADMATGAVGMITDGSMAEEILQNGRADLIF 305 (338)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCSHHHHHHHHHTTSCSEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHcCCceEEe
Confidence 568888899999989999999987653210000100011234555565 3478887777777899999999998 89988
Q ss_pred cC
Q 020848 134 HN 135 (320)
Q Consensus 134 i~ 135 (320)
++
T Consensus 306 iG 307 (338)
T 1z41_A 306 IG 307 (338)
T ss_dssp EC
T ss_pred ec
Confidence 86
No 77
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=90.29 E-value=1.4 Score=36.67 Aligned_cols=122 Identities=11% Similarity=0.138 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHHHcCCCEEEEeccc----CCCCC--CchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCe
Q 020848 58 KDAVMQAAQKAKEAGSTRFCMGAAW----RDTIG--RKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTA 131 (320)
Q Consensus 58 ~eei~~~~~~~~~~g~~~i~l~~g~----~~~~g--e~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~ 131 (320)
.+|+++.+.. ..-..++|+=-. +.-+| -....+.+.+.++.+++.|++++.-.. -+.++++.-++.|.++
T Consensus 76 t~emi~ia~~---~kP~~vtLVPE~r~e~TTegGldv~~~~~~l~~~i~~L~~~GIrVSLFID-pd~~qi~aA~~~GA~~ 151 (243)
T 1m5w_A 76 TEEMLAIAVE---TKPHFCCLVPEKRQEVTTEGGLDVAGQRDKMRDACKRLADAGIQVSLFID-ADEEQIKAAAEVGAPF 151 (243)
T ss_dssp SHHHHHHHHH---HCCSEEEECCCCSSCSSCCSCCCSGGGHHHHHHHHHHHHHTTCEEEEEEC-SCHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHH---cCCCEEEECCCCCCCcCCCcchhHHhhHHHHHHHHHHHHHCCCEEEEEeC-CCHHHHHHHHHhCcCE
Confidence 3556655543 334578886110 00001 123678899999999999998754433 4689999999999999
Q ss_pred eccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHH
Q 020848 132 YNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGL 187 (320)
Q Consensus 132 v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~ 187 (320)
|-+.-..+-+.+........++.+.++.+.+++.|+.++ .|+|-+.+.+..+
T Consensus 152 IELhTG~Ya~a~~~~~~~~el~~i~~aa~~A~~lGL~Vn----AGHgL~y~Nv~~i 203 (243)
T 1m5w_A 152 IEIHTGCYADAKTDAEQAQELARIAKAATFAASLGLKVN----AGHGLTYHNVKAI 203 (243)
T ss_dssp EEEECHHHHHCCSHHHHHHHHHHHHHHHHHHHHTTCEEE----EESSCCTTTHHHH
T ss_pred EEEechhhhcCCCchhHHHHHHHHHHHHHHHHHcCCEEe----cCCCCCHHHHHHH
Confidence 887654431111111111246667777788888887764 4576665554443
No 78
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=90.03 E-value=5.1 Score=33.36 Aligned_cols=95 Identities=16% Similarity=0.110 Sum_probs=58.4
Q ss_pred HHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHhccCeeccCccccHH
Q 020848 63 QAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTSRE 141 (320)
Q Consensus 63 ~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~let~~~ 141 (320)
+.++.+.+.|+..|.+.+..+.-...... ++.+++++ ..++++..+.|..+.+.+.++.++|++.+.++= .
T Consensus 155 e~~~~~~~~G~~~i~~~~~~~~g~~~g~~----~~~~~~l~~~~~ipvia~GGI~~~~d~~~~~~~Gadgv~vGs----a 226 (253)
T 1thf_D 155 DWVVEVEKRGAGEILLTSIDRDGTKSGYD----TEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAAS----V 226 (253)
T ss_dssp HHHHHHHHTTCSEEEEEETTTTTSCSCCC----HHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTTCSEEEESH----H
T ss_pred HHHHHHHHCCCCEEEEEeccCCCCCCCCC----HHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCChHHHHHH----H
Confidence 33444556899988886432211111112 34555555 347888888888888999999999999988761 2
Q ss_pred HHhhhCCCCCHHHHHHHHHHHHHcCCeeee
Q 020848 142 FYSKIITTRSYDERLETLKHVREAGINVCS 171 (320)
Q Consensus 142 ~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~ 171 (320)
++. ...+++ ++++.+++.|+.+..
T Consensus 227 l~~---~~~~~~---~~~~~l~~~g~~~~~ 250 (253)
T 1thf_D 227 FHF---REIDVR---ELKEYLKKHGVNVRL 250 (253)
T ss_dssp HHT---TCSCHH---HHHHHHHHTTCCCCC
T ss_pred HHc---CCCCHH---HHHHHHHHcCCcccc
Confidence 221 122554 444556777876643
No 79
>3c6c_A 3-keto-5-aminohexanoate cleavage enzyme; DUF849 family protein, TIM beta/alpha-barrel fold, structura genomics; HET: MSE; 1.72A {Ralstonia eutropha}
Probab=89.81 E-value=9.4 Score=33.21 Aligned_cols=223 Identities=17% Similarity=0.163 Sum_probs=120.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCC-CCCc-hhHHHHHHHHHHhhhc--CceEEEeCC-----------C-----
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDT-IGRK-TNFNQILEYVKDIRDM--GMEVCCTLG-----------M----- 115 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~-~ge~-~~~~~l~~~i~~~k~~--~~~i~~~~g-----------~----- 115 (320)
.++|||.+.+....+.|..-+.+-. +.+ .|.| ...+.+.+++..+++. ++-+..|.| .
T Consensus 45 vTpeEIa~~A~~a~~AGAaivHlHv--Rd~~~G~ps~d~~~y~e~~~~IR~~~~d~ii~~TTg~gg~~~g~~~~p~~~~~ 122 (316)
T 3c6c_A 45 ITPAQIADACVEAAKAGASVAHIHV--RDPKTGGGSRDPVLFKEVVDRVRSSGTDIVLNLTCGLGAFLLPDPEDESKALP 122 (316)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEEECE--ECTTTCCEECCHHHHHHHHHHHHTTTCCCEEEEECCCSEEECEETTEEEEECT
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEee--cCCCCCCcCCCHHHHHHHHHHHHHHCCCeEEEeCCCccccccCcccCcccccc
Confidence 8999999999999999998888743 332 2334 4556677777777743 666666555 1
Q ss_pred -----CCHHHHHHHHHhccCeeccCccccH---HHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHH
Q 020848 116 -----LEKHQAIELKKAGLTAYNHNLDTSR---EFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGL 187 (320)
Q Consensus 116 -----l~~e~l~~L~~aGld~v~i~let~~---~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~ 187 (320)
-.++.+.-+.+..-|..+++.=+.. ..-+.+ =..+++.+.+.++.+++.|++..+.+ + +..++...
T Consensus 123 ~~~l~~~eeR~~~~~~~~Pe~aSl~~Gs~Nf~~~~~~~v-~~n~~~~i~~~~~~~~e~Gv~pE~e~-f----d~g~l~~~ 196 (316)
T 3c6c_A 123 ESDVVPVAERVKHLEDCLPEIASLDITTGNQVEGKLEFV-YLNTTRTLRAMARRFQELGIKPELEV-F----SPGDILFG 196 (316)
T ss_dssp TCEECCHHHHTHHHHHHCCSEEEEECCCEEEEETTEEEE-ECCCHHHHHHHHHHHHHHTCEEEEEE-S----SHHHHHHH
T ss_pred ccccCCHHHHHHHHHhcCCCeEEeccccccccCCCCcee-ecCCHHHHHHHHHHHHHcCCeEEEEE-E----CHHHHHHH
Confidence 1344455554555565554432221 000001 13578888889999999998765442 2 34565554
Q ss_pred HHHHhcCCCCCCeeeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCC-ceeecC-CcccccChhHHHHHHHcCCce
Q 020848 188 LHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPK-AMVRLS-AGRVRFSMPEQALCFLAGANS 265 (320)
Q Consensus 188 l~~l~~l~~~~~~v~~~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~-~~i~~~-~g~~~~~~~~~~~~~~~Gan~ 265 (320)
..+++ .|. +..=.+..|.- |-+.. -+.+++.+..++. .+|. ..+.+. -|+..+ +....++..|.+.
T Consensus 197 ~~l~~-~Gl-l~~p~~~~~vl--Gv~~g--~p~~p~~L~~~~~----~lp~~~~wsv~g~Gr~q~--p~~~~A~~~GGhv 264 (316)
T 3c6c_A 197 KQLIE-EGL-IDGVPLFQMVL--GVLWG--APASTETMIYQRN----LIPANAQWAAFGIGRDQM--PMMAQAALLGGNV 264 (316)
T ss_dssp HHHHH-TTC-SCSSCEEEEEC--SCTTS--CCSCHHHHHHHHT----TSCTTSEEEEECCGGGHH--HHHHHHHHHTCBE
T ss_pred HHHHH-cCC-CCCCceEEEEE--ecCCC--CCCCHHHHHHHHH----hcCCCCeEEEEecCcchH--HHHHHHHHcCCCe
Confidence 44443 332 11111222211 32222 2356666555443 2443 222221 111111 2334567778775
Q ss_pred Eee-CCccccCC------CCChhHHHHHHHHcCCCcCCCC
Q 020848 266 IFT-GEKLLTTP------NNDFDADQLMFKVLGLTPKAPS 298 (320)
Q Consensus 266 ~~~-~~~~~~~~------~~~~~~~~~~i~~~G~~p~~~~ 298 (320)
-+. +|.+.... ..-+++.+++++++|+.|...+
T Consensus 265 RVGlEDnl~~~~G~~AsNa~lV~~a~~i~~~lGr~vATp~ 304 (316)
T 3c6c_A 265 RVGLEDNLYLSRGVFATNGQLVERARTVIEHLGMSVATPD 304 (316)
T ss_dssp EESTTTCCEEETTEECCHHHHHHHHHHHHHHTTCEECCHH
T ss_pred EEccccccCCCCCcCCCHHHHHHHHHHHHHHcCCCCCCHH
Confidence 332 23221111 2237788889999999887654
No 80
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=89.81 E-value=2.3 Score=37.38 Aligned_cols=79 Identities=14% Similarity=0.077 Sum_probs=58.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCC------------CC---CCchhHHHHHHHHHHhhh-c--CceEEEeCCCCC
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRD------------TI---GRKTNFNQILEYVKDIRD-M--GMEVCCTLGMLE 117 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~------------~~---ge~~~~~~l~~~i~~~k~-~--~~~i~~~~g~l~ 117 (320)
++.+++.+.++.+.+.|++.|.+.+++.. .+ | +...+.-++.++.+++ . ++++..+.|..+
T Consensus 222 ~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g-~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~ 300 (336)
T 1f76_A 222 LSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSG-RPLQLKSTEIIRRLSLELNGRLPIIGVGGIDS 300 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEE-GGGHHHHHHHHHHHHHHHTTSSCEEEESSCCS
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCC-chhHHHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 56778888899999999999988654211 11 2 1123445567777763 4 688888999999
Q ss_pred HHHHHHHHHhccCeeccC
Q 020848 118 KHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 118 ~e~l~~L~~aGld~v~i~ 135 (320)
.+.+.+..++|.|.|.++
T Consensus 301 ~~da~~~l~~GAd~V~ig 318 (336)
T 1f76_A 301 VIAAREKIAAGASLVQIY 318 (336)
T ss_dssp HHHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHHCCCCEEEee
Confidence 999998889999999886
No 81
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=89.67 E-value=2 Score=39.30 Aligned_cols=74 Identities=9% Similarity=0.134 Sum_probs=50.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCC----chhHHHHHHHHHHhhh------cCceEEEeCCCCCHHHHHHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGR----KTNFNQILEYVKDIRD------MGMEVCCTLGMLEKHQAIELK 125 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge----~~~~~~l~~~i~~~k~------~~~~i~~~~g~l~~e~l~~L~ 125 (320)
.+.+++++.++.+.+.|++-|-++|-.+-++.+ ...++++...|+.+++ .++.++ ......+.+++-.
T Consensus 209 ~~~~~al~~A~~mv~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pvI~~l~~~~~~~~~~vpIS--IDT~~~~VaeaAL 286 (442)
T 3mcm_A 209 FDDNQRKLNLDELIQSGAEIIDIGAESTKPDAKPISIEEEFNKLNEFLEYFKSQLANLIYKPLVS--IDTRKLEVMQKIL 286 (442)
T ss_dssp SCCCHHHHHHHHHHHHTCSEEEEECCCCCC----CCHHHHHHHHHHHHHHHHHHTTTCSSCCEEE--EECCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEE--EeCCCHHHHHHHH
Confidence 467899999999999999988887633333221 2345667777888775 144443 3456778888877
Q ss_pred H--hccCe
Q 020848 126 K--AGLTA 131 (320)
Q Consensus 126 ~--aGld~ 131 (320)
+ +|.+-
T Consensus 287 ~~~aGa~i 294 (442)
T 3mcm_A 287 AKHHDIIW 294 (442)
T ss_dssp HHHGGGCC
T ss_pred hhCCCCCE
Confidence 7 88876
No 82
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=89.59 E-value=4.9 Score=33.23 Aligned_cols=199 Identities=11% Similarity=0.092 Sum_probs=98.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEEE--ecccCCCCCCchhHHHHHHHHHHhhhc--CceEEEeCCCCC-HHHHHHHHHhccCe
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCM--GAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTLGMLE-KHQAIELKKAGLTA 131 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l--~~g~~~~~ge~~~~~~l~~~i~~~k~~--~~~i~~~~g~l~-~e~l~~L~~aGld~ 131 (320)
+.-.+.++++.+.+.|++.+++ -.|...+. ..+ =.+.++.+++. +..+.++.-..+ .+.++.+.+ .|.
T Consensus 16 D~~~l~~~i~~~~~~g~d~iHvDvmDg~fvpn---~t~--G~~~v~~lr~~~p~~~~dvhLmv~dp~~~i~~~~~--Ad~ 88 (227)
T 1tqx_A 16 NISKLAEETQRMESLGAEWIHLDVMDMHFVPN---LSF--GPPVINNLKKYTKSIFFDVHLMVEYPEKYVPLLKT--SNQ 88 (227)
T ss_dssp CGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSC---BCC--CHHHHHHHGGGCSSCEEEEEEESSCGGGGGGGCTT--SSE
T ss_pred ChhhHHHHHHHHHHcCCCEEEEEEEeCCcCcc---hhc--CHHHHHHHHHhCCCCcEEEEEEEcCHHHHHHHHHh--CCE
Confidence 3445566666667788886554 33321111 111 01444455532 233222211111 233444544 777
Q ss_pred eccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeeeeeeecCC
Q 020848 132 YNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKG 211 (320)
Q Consensus 132 v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~~~p~~g 211 (320)
+.+..++. ..+..+.++..+.+++.|.++++.+ ..+ |+ .+.++.+.+++ .++.|-++...| |
T Consensus 89 itvH~ea~---------~~~~~~~i~~~~~i~~~G~k~gval--np~-tp---~~~~~~~l~~g-~~D~VlvmsV~p--G 150 (227)
T 1tqx_A 89 LTFHFEAL---------NEDTERCIQLAKEIRDNNLWCGISI--KPK-TD---VQKLVPILDTN-LINTVLVMTVEP--G 150 (227)
T ss_dssp EEEEGGGG---------TTCHHHHHHHHHHHHTTTCEEEEEE--CTT-SC---GGGGHHHHTTT-CCSEEEEESSCT--T
T ss_pred EEEeecCC---------ccCHHHHHHHHHHHHHcCCeEEEEe--CCC-Cc---HHHHHHHhhcC-CcCEEEEeeecc--C
Confidence 87776653 1123333332228888998876654 223 32 22233333432 157777777665 4
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccChhHHHHHHHcCCceEeeCCccccCCCCChhHHHHHHHH
Q 020848 212 TPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKV 289 (320)
Q Consensus 212 t~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~~~~~~~~~~Gan~~~~~~~~~~~~~~~~~~~~~~i~~ 289 (320)
..-+...+ ..+..+...|.+.++..+.+.+ ++..+.......+|||.++.|..+.. ..++.+.++.+++
T Consensus 151 f~gq~f~~----~~l~ki~~lr~~~~~~~I~VdG---GI~~~ti~~~~~aGAd~~V~GsaIf~--~~d~~~~i~~l~~ 219 (227)
T 1tqx_A 151 FGGQSFMH----DMMGKVSFLRKKYKNLNIQVDG---GLNIETTEISASHGANIIVAGTSIFN--AEDPKYVIDTMRV 219 (227)
T ss_dssp CSSCCCCG----GGHHHHHHHHHHCTTCEEEEES---SCCHHHHHHHHHHTCCEEEESHHHHT--CSSHHHHHHHHHH
T ss_pred CCCcccch----HHHHHHHHHHHhccCCeEEEEC---CCCHHHHHHHHHcCCCEEEEeHHHhC--CCCHHHHHHHHHH
Confidence 32111111 2233444555555554455544 34455556778899999999964332 2346666655544
No 83
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=89.59 E-value=4.2 Score=35.57 Aligned_cols=135 Identities=14% Similarity=0.164 Sum_probs=78.0
Q ss_pred HHHHHHHHHHH-HcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh-hcCceEEEe-CC--CCCHHHHHHHHHhccCe--
Q 020848 59 DAVMQAAQKAK-EAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEVCCT-LG--MLEKHQAIELKKAGLTA-- 131 (320)
Q Consensus 59 eei~~~~~~~~-~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k-~~~~~i~~~-~g--~l~~e~l~~L~~aGld~-- 131 (320)
+++.+.++... +.|++-|.+++-+..+++.+...++..+.++.+. ..++++++. .| ....+.++.-.++|.+.
T Consensus 80 ~~~~~~A~~~v~~~GAdiIDIg~eStrP~~~~vs~ee~~~~V~~v~~~~~vPlsIDg~~~~T~~~eV~eaAleagag~~~ 159 (323)
T 4djd_D 80 NEPGRWAQKCVAEYGADLIYLKLDGADPEGANHSVDQCVATVKEVLQAVGVPLVVVGCGDVEKDHEVLEAVAEAAAGENL 159 (323)
T ss_dssp TCHHHHHHHHHHTTCCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCCSCEEEECCSCHHHHHHHHHHHHHHTTTSCC
T ss_pred HhHHHHHHHHHHHcCCCEEEEcCccCCCCCCCCCHHHHHHHHHHHHhhCCceEEEECCCCCCCCHHHHHHHHHhcCCCCC
Confidence 45777777777 8899999997644455555556677888888887 457776554 22 35577788888887542
Q ss_pred -ec-cCccccHHHHhhhC---------CCCCHHHHHHHHHHHHHcCCe---eeeeEEEE-eCCCHHHHHHHHHHHhc
Q 020848 132 -YN-HNLDTSREFYSKII---------TTRSYDERLETLKHVREAGIN---VCSGGIIG-LGEAEEDRVGLLHTLAT 193 (320)
Q Consensus 132 -v~-i~let~~~~~~~i~---------~~~~~~~~l~~i~~a~~~Gi~---v~~~~i~G-lget~ed~~~~l~~l~~ 193 (320)
|+ ++.+..++..+... ...+.+-..+.++.+.++|++ +-++-.+| +|.+.++-.++++.++.
T Consensus 160 lINsv~~~~~~~m~~laa~~g~~vVlmh~~d~~~~~~l~~~a~~~GI~~e~IIlDPg~g~fgk~~e~~l~~l~~ir~ 236 (323)
T 4djd_D 160 LLGNAEQENYKSLTAACMVHKHNIIARSPLDINICKQLNILINEMNLPLDHIVIDPSIGGLGYGIEYSFSIMERIRL 236 (323)
T ss_dssp EEEEEBTTBCHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHHTTTCCGGGEEEECCCCCTTTTHHHHHHHHHHHHH
T ss_pred eEEECCcccHHHHHHHHHHhCCeEEEEccchHHHHHHHHHHHHHcCCCHHHEEEeCCCccccCCHHHHHHHHHHHHH
Confidence 22 22222222222111 012344444445556666762 55555555 35666666665555543
No 84
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=89.44 E-value=1.6 Score=36.90 Aligned_cols=120 Identities=13% Similarity=0.144 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHHcCCCEEEEeccc----CCCCC--CchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCe
Q 020848 58 KDAVMQAAQKAKEAGSTRFCMGAAW----RDTIG--RKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTA 131 (320)
Q Consensus 58 ~eei~~~~~~~~~~g~~~i~l~~g~----~~~~g--e~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~ 131 (320)
.+|+++.+.. ..-..++|+--. +.-+| -....+.|.+.++.+++.|++++.-.. -+.++++.-++.|.|+
T Consensus 104 t~emi~ial~---~kP~~vtLVPEkreE~TTegGlDv~~~~~~L~~~i~~L~~~GIrVSLFID-pd~~qI~aA~~~GAd~ 179 (278)
T 3gk0_A 104 TPEMLDIACE---IRPHDACLVPEKRSELTTEGGLDVVGHFDAVRAACKQLADAGVRVSLFID-PDEAQIRAAHETGAPV 179 (278)
T ss_dssp SHHHHHHHHH---HCCSEEEECCCSGGGBCSSSSBCTTTTHHHHHHHHHHHHHTTCEEEEEEC-SCHHHHHHHHHHTCSE
T ss_pred CHHHHHHHHH---cCCCEEEECCCCCCCcCCCcchhhhccHHHHHHHHHHHHHCCCEEEEEeC-CCHHHHHHHHHhCcCE
Confidence 4566666544 334578886110 00011 123578899999999999998654332 5688999999999999
Q ss_pred eccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHH
Q 020848 132 YNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRV 185 (320)
Q Consensus 132 v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~ 185 (320)
|.+.-..+.+.+..-.....++.+.++.+.+++.|+.|. .|+|-+.+.+.
T Consensus 180 IELhTG~YA~a~~~~~~~~el~rl~~aA~~A~~lGL~Vn----AGHGL~y~Nv~ 229 (278)
T 3gk0_A 180 IELHTGRYADAHDAAEQQREFERIATGVDAGIALGLKVN----AGHGLHYTNVQ 229 (278)
T ss_dssp EEECCHHHHTCSSHHHHHHHHHHHHHHHHHHHHTTCEEE----ECTTCCTTTHH
T ss_pred EEEecchhhccCCchhHHHHHHHHHHHHHHHHHcCCEEe----cCCCCCHHHHH
Confidence 988553331111100011245666777777888887764 45665655554
No 85
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=89.35 E-value=1.1 Score=39.82 Aligned_cols=76 Identities=14% Similarity=0.076 Sum_probs=52.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCC----CCCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHhc-c
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDT----IGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAG-L 129 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~----~ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~aG-l 129 (320)
.+.++..+.++.+.+.|++.+.+..|.... .+ +. ...++++.+| ..++++..+.|..+.+.++++.+.| +
T Consensus 226 ~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~-~~---~~~~~~~~ik~~~~iPVi~~GgI~s~e~a~~~L~~G~a 301 (340)
T 3gr7_A 226 LTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVY-PG---YQVPFAELIRREADIPTGAVGLITSGWQAEEILQNGRA 301 (340)
T ss_dssp CCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCC-TT---TTHHHHHHHHHHTTCCEEEESSCCCHHHHHHHHHTTSC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCC-cc---ccHHHHHHHHHHcCCcEEeeCCCCCHHHHHHHHHCCCe
Confidence 456788888888888999988886543211 11 11 1234555666 3477787777778889988888888 8
Q ss_pred CeeccC
Q 020848 130 TAYNHN 135 (320)
Q Consensus 130 d~v~i~ 135 (320)
|.|.++
T Consensus 302 D~V~iG 307 (340)
T 3gr7_A 302 DLVFLG 307 (340)
T ss_dssp SEEEEC
T ss_pred eEEEec
Confidence 888886
No 86
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=89.04 E-value=6.2 Score=34.32 Aligned_cols=72 Identities=14% Similarity=0.110 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhh-cCceEEE-eCCC--CCHHHHHHHHHhccC
Q 020848 59 DAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCC-TLGM--LEKHQAIELKKAGLT 130 (320)
Q Consensus 59 eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~-~~~~i~~-~~g~--l~~e~l~~L~~aGld 130 (320)
+.+++.++...+.|++-|.+++.+..++..+...++..+.++.+++ .++++++ ..|. ...+.++.-.++|.+
T Consensus 74 ~~~~~~A~~~v~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~~vplsI~DT~~~~~~~~V~eaal~aga~ 149 (310)
T 2h9a_B 74 NDPVAWAKKCVEYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAIDVPLMIIGCGVEEKDAEIFPVIGEALSG 149 (310)
T ss_dssp TCHHHHHHHHHHTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhCCceEEEECCCCCCCCHHHHHHHHHhCCC
Confidence 6788888888899999999987544444445667778888888874 4777655 3332 667888888888876
No 87
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=89.04 E-value=2.7 Score=35.87 Aligned_cols=187 Identities=15% Similarity=0.227 Sum_probs=105.2
Q ss_pred HHHHHHHHHhh-hc-CceEE-----EeCCCCCHHHHHHHHHhccCee-ccC----cccc-HHHHhhhCCCCCHHHHHHHH
Q 020848 93 NQILEYVKDIR-DM-GMEVC-----CTLGMLEKHQAIELKKAGLTAY-NHN----LDTS-REFYSKIITTRSYDERLETL 159 (320)
Q Consensus 93 ~~l~~~i~~~k-~~-~~~i~-----~~~g~l~~e~l~~L~~aGld~v-~i~----let~-~~~~~~i~~~~~~~~~l~~i 159 (320)
+-++++.+++- .. ++++. +.++.-....++.|+++|+..+ +++ +|+. ++.++. .+-.|++..+.|
T Consensus 79 ~iv~e~~~evlp~v~~iPV~Agv~~~DP~~~~g~~Le~lk~~Gf~Gv~N~ptvglidG~fr~~LEE--~gm~~~~eve~I 156 (286)
T 2p10_A 79 QIVVDMAREVLPVVRHTPVLAGVNGTDPFMVMSTFLRELKEIGFAGVQNFPTVGLIDGLFRQNLEE--TGMSYAQEVEMI 156 (286)
T ss_dssp HHHHHHHHHHGGGCSSSCEEEEECTTCTTCCHHHHHHHHHHHTCCEEEECSCGGGCCHHHHHHHHH--TTCCHHHHHHHH
T ss_pred HHHHHHHHhhhccCCCCCEEEEECCcCCCcCHHHHHHHHHHhCCceEEECCCcccccchhhhhHhh--cCCCHHHHHHHH
Confidence 45666666554 22 45543 2345567888999999998877 333 3333 333333 356899999999
Q ss_pred HHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeeeeeeecCCCCCCCCCCCCHHH----HHHHHHHHHHh
Q 020848 160 KHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWE----MIRMIATARIV 235 (320)
Q Consensus 160 ~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~~~p~~gt~~~~~~~~~~~e----~~~~~a~~R~~ 235 (320)
+.+++.|+.+.+ ++ .|.++..++. +++ ++.|.+.+=.-..| ........+.++ ..++...++..
T Consensus 157 ~~A~~~gL~Ti~-~v----~~~eeA~amA----~ag--pDiI~~h~glT~gg-lIG~~~avs~~~~~e~i~~i~~a~~~v 224 (286)
T 2p10_A 157 AEAHKLDLLTTP-YV----FSPEDAVAMA----KAG--ADILVCHMGLTTGG-AIGARSGKSMDDCVSLINECIEAARTI 224 (286)
T ss_dssp HHHHHTTCEECC-EE----CSHHHHHHHH----HHT--CSEEEEECSCC----------CCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCeEEE-ec----CCHHHHHHHH----HcC--CCEEEECCCCCCCC-cccCCCcccHHHhHHHHHHHHHHHHHh
Confidence 999999986421 12 3667666554 455 66655532110111 111123344544 44445667888
Q ss_pred CCCceeecCCcccccChhHHHHHHHc--CCceEeeCCccccCC-CCChhHHHHHHHHcCCCc
Q 020848 236 MPKAMVRLSAGRVRFSMPEQALCFLA--GANSIFTGEKLLTTP-NNDFDADQLMFKVLGLTP 294 (320)
Q Consensus 236 ~p~~~i~~~~g~~~~~~~~~~~~~~~--Gan~~~~~~~~~~~~-~~~~~~~~~~i~~~G~~p 294 (320)
-|+..+-..+|-+.- ++.....+.. |++.++....+...+ .....+..+.++...+.|
T Consensus 225 npdvivLc~gGpIst-peDv~~~l~~t~G~~G~~gASsier~p~e~ai~~~~~~fk~~~~~~ 285 (286)
T 2p10_A 225 RDDIIILSHGGPIAN-PEDARFILDSCQGCHGFYGASSMERLPAEEAIRSQTLAFKAIRRQP 285 (286)
T ss_dssp CSCCEEEEESTTCCS-HHHHHHHHHHCTTCCEEEESHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred CCCcEEEecCCCCCC-HHHHHHHHhcCCCccEEEeehhhhcCCHHHHHHHHHHHHHhcccCC
Confidence 888654433322322 3334566666 899887765443322 234566667777777776
No 88
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=88.67 E-value=12 Score=33.00 Aligned_cols=178 Identities=13% Similarity=0.122 Sum_probs=106.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCCC--------C-----CC---------chhHHHHHHHHHHhhhcCceEEEeCC
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCMGAAWRDT--------I-----GR---------KTNFNQILEYVKDIRDMGMEVCCTLG 114 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l~~g~~~~--------~-----ge---------~~~~~~l~~~i~~~k~~~~~i~~~~g 114 (320)
+.|.+.+.++.+++.|++-+-+|.-...+ + +. .+..+.+..+.+..++.|+.+.+++
T Consensus 33 s~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~~Gi~~~st~- 111 (349)
T 2wqp_A 33 SLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVESKGMIFISTL- 111 (349)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHHTTCEEEEEE-
T ss_pred CHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHHhCCeEEEee-
Confidence 68999999999999999999887321100 0 00 0234556666666668899876654
Q ss_pred CCCHHHHHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeC-CCHHHHHHHHHHHhc
Q 020848 115 MLEKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLG-EAEEDRVGLLHTLAT 193 (320)
Q Consensus 115 ~l~~e~l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glg-et~ed~~~~l~~l~~ 193 (320)
++.+.++.|.+.|++.+.|+--. -.+ +.-++.+.+.|.++ ++-.| -|.+|+...++++..
T Consensus 112 -~d~~svd~l~~~~v~~~KI~S~~----------~~n----~~LL~~va~~gkPv----iLstGmat~~Ei~~Ave~i~~ 172 (349)
T 2wqp_A 112 -FSRAAALRLQRMDIPAYKIGSGE----------CNN----YPLIKLVASFGKPI----ILSTGMNSIESIKKSVEIIRE 172 (349)
T ss_dssp -CSHHHHHHHHHHTCSCEEECGGG----------TTC----HHHHHHHHTTCSCE----EEECTTCCHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHhcCCCEEEECccc----------ccC----HHHHHHHHhcCCeE----EEECCCCCHHHHHHHHHHHHH
Confidence 78999999999999988885200 012 34466666667664 33232 389999999999998
Q ss_pred CCCCCCeeeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccChhHHHHHHHcCCceE
Q 020848 194 LPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSI 266 (320)
Q Consensus 194 l~~~~~~v~~~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~~~~~~~~~~Gan~~ 266 (320)
.| . .+.+.. ++.-+ |.+..+--++.+..++..+|+..+-.+.- ..+......++..||+-+
T Consensus 173 ~G--~-~iiLlh-----c~s~Y--p~~~~~~nL~ai~~lk~~f~~lpVg~sdH--t~G~~~~~AAvAlGA~iI 233 (349)
T 2wqp_A 173 AG--V-PYALLH-----CTNIY--PTPYEDVRLGGMNDLSEAFPDAIIGLSDH--TLDNYACLGAVALGGSIL 233 (349)
T ss_dssp HT--C-CEEEEE-----CCCCS--SCCGGGCCTHHHHHHHHHCTTSEEEEECC--SSSSHHHHHHHHHTCCEE
T ss_pred cC--C-CEEEEe-----ccCCC--CCChhhcCHHHHHHHHHHCCCCCEEeCCC--CCcHHHHHHHHHhCCCEE
Confidence 77 3 233322 22111 11111112455666666664332322211 122345567788899955
No 89
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=88.55 E-value=7.3 Score=36.61 Aligned_cols=139 Identities=13% Similarity=0.173 Sum_probs=83.2
Q ss_pred CHHHHHHHHHHHHHcC-----CCEEEEecccCCCC----CCchhHHHHHHHHHHhhhc---C-ceEEEeCCCCCHHHHHH
Q 020848 57 TKDAVMQAAQKAKEAG-----STRFCMGAAWRDTI----GRKTNFNQILEYVKDIRDM---G-MEVCCTLGMLEKHQAIE 123 (320)
Q Consensus 57 s~eei~~~~~~~~~~g-----~~~i~l~~g~~~~~----ge~~~~~~l~~~i~~~k~~---~-~~i~~~~g~l~~e~l~~ 123 (320)
+.+.+++.++.+.+.| +.-|-++|-.+-++ .+...+++++..|+.+++. . ..+.++......+.+++
T Consensus 247 ~~~~al~~a~~mv~~G~~~~~AdIIDIGgeSTRPGa~~vs~eEEl~RvvpvI~~i~~~~~~~~~~vpISIDT~~a~Vaea 326 (545)
T 2bmb_A 247 DIESQLNDIIKLCKDALYLHESVIIDVGGCSTRPNSIQASEEEEIRRSIPLIKAIRESTELPQDKVILSIDTYRSNVAKE 326 (545)
T ss_dssp CHHHHHHHHHHHHHHHHTTCSCEEEEEECSCCSTTCCCCCHHHHHHHHHHHHHHHHHCSSSCGGGEEEEEECCCHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCCCCceEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEeCCcHHHHHH
Confidence 8999999999999999 87777876333232 1124466777788887641 1 12233334566777777
Q ss_pred HHHhccCeec-cCcccc-HHHH---hhh--------C-C--CC------CHH----------------------------
Q 020848 124 LKKAGLTAYN-HNLDTS-REFY---SKI--------I-T--TR------SYD---------------------------- 153 (320)
Q Consensus 124 L~~aGld~v~-i~let~-~~~~---~~i--------~-~--~~------~~~---------------------------- 153 (320)
-.++|.+-|+ ++-... ++.+ ... + + .. .|+
T Consensus 327 Al~aGadIINDVsg~~~d~~m~~vva~~~~~~vVlmH~rG~p~tm~~~~~y~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 406 (545)
T 2bmb_A 327 AIKVGVDIINDISGGLFDSNMFAVIAENPEICYILSHTRGDISTMNRLAHYENFALGDSIQQEFVHNTDIQQLDDLKDKT 406 (545)
T ss_dssp HHHTTCCEEEETTTTSSCTTHHHHHHTCTTSEEEEECCCSCTTTGGGCCCCSSCTTTTTEEEEEETTEEGGGSTTHHHHC
T ss_pred HHHcCCCEEEeCCCCcCChHHHHHHHHhCCCeEEEECCCCCCCCccccccccccccccccchhccccccccccccccccc
Confidence 7777777665 332211 2111 111 0 0 00 111
Q ss_pred --------HHHHHHHHHHHcCCe---eeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 154 --------ERLETLKHVREAGIN---VCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 154 --------~~l~~i~~a~~~Gi~---v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
...+.++.|.++|++ +-++--+|++.+.++-.++++.+..+.
T Consensus 407 ~vv~~v~~~l~~~i~~a~~~GI~~~~IilDPGiGF~Kt~~~nl~lL~~l~~l~ 459 (545)
T 2bmb_A 407 VLIRNVGQEIGERYIKAIDNGVKRWQILIDPGLGFAKTWKQNLQIIRHIPILK 459 (545)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCCCCcccChHHHHHHHHHHHHHH
Confidence 123467777888985 777777777778877777776666653
No 90
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=88.54 E-value=9.1 Score=31.36 Aligned_cols=165 Identities=9% Similarity=0.015 Sum_probs=92.5
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhh-cCceEEEeCC-CCCHHHHHHHHHhccCe
Q 020848 54 KLMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCCTLG-MLEKHQAIELKKAGLTA 131 (320)
Q Consensus 54 ~~~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~-~~~~i~~~~g-~l~~e~l~~L~~aGld~ 131 (320)
+..++++....++.+.+.|++.+-++-- .| .-++.|+.+++ .. ...+-.| .++.++++...++|.+.
T Consensus 20 r~~~~~~a~~~a~al~~gGi~~iEvt~~------t~----~a~~~I~~l~~~~p-~~~IGAGTVlt~~~a~~ai~AGA~f 88 (217)
T 3lab_A 20 VIDDLVHAIPMAKALVAGGVHLLEVTLR------TE----AGLAAISAIKKAVP-EAIVGAGTVCTADDFQKAIDAGAQF 88 (217)
T ss_dssp CCSCGGGHHHHHHHHHHTTCCEEEEETT------ST----THHHHHHHHHHHCT-TSEEEEECCCSHHHHHHHHHHTCSE
T ss_pred EcCCHHHHHHHHHHHHHcCCCEEEEeCC------Cc----cHHHHHHHHHHHCC-CCeEeeccccCHHHHHHHHHcCCCE
Confidence 3367899999999999999998877531 12 23355555553 22 1222224 48999999999999988
Q ss_pred eccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCe--eeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeeeeeeec
Q 020848 132 YNHNLDTSREFYSKIITTRSYDERLETLKHVREAGIN--VCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAV 209 (320)
Q Consensus 132 v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~--v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~~~p~ 209 (320)
+-.. +-+. +.++.+++.|++ ..--++.|. -|..|+... .++| .+.+.++ |
T Consensus 89 ivsP-------------~~~~----evi~~~~~~~v~~~~~~~~~PG~-~TptE~~~A----~~~G--ad~vK~F---P- 140 (217)
T 3lab_A 89 IVSP-------------GLTP----ELIEKAKQVKLDGQWQGVFLPGV-ATASEVMIA----AQAG--ITQLKCF---P- 140 (217)
T ss_dssp EEES-------------SCCH----HHHHHHHHHHHHCSCCCEEEEEE-CSHHHHHHH----HHTT--CCEEEET---T-
T ss_pred EEeC-------------CCcH----HHHHHHHHcCCCccCCCeEeCCC-CCHHHHHHH----HHcC--CCEEEEC---c-
Confidence 7431 1122 445667776661 001124444 377776654 4566 6777653 2
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccChhHHHHHHHcCCceEeeCC
Q 020848 210 KGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGE 270 (320)
Q Consensus 210 ~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~~~~~~~~~~Gan~~~~~~ 270 (320)
...+. . ...+...+..+|+..+-..+| + .++.....+.+|+..+..|.
T Consensus 141 -a~~~g------G---~~~lkal~~p~p~i~~~ptGG-I--~~~N~~~~l~aGa~~~vgGs 188 (217)
T 3lab_A 141 -ASAIG------G---AKLLKAWSGPFPDIQFCPTGG-I--SKDNYKEYLGLPNVICAGGS 188 (217)
T ss_dssp -TTTTT------H---HHHHHHHHTTCTTCEEEEBSS-C--CTTTHHHHHHSTTBCCEEES
T ss_pred -ccccc------C---HHHHHHHHhhhcCceEEEeCC-C--CHHHHHHHHHCCCEEEEECh
Confidence 21111 1 233444555566533322222 2 33333556678876555565
No 91
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=88.47 E-value=7.5 Score=31.95 Aligned_cols=193 Identities=16% Similarity=0.207 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHHcCCCEEEEe--cccCCCCCCchhHHHHHHHHHHhhhc-Cc----eEEEeCCCCCHHHHHHHHHhccC
Q 020848 58 KDAVMQAAQKAKEAGSTRFCMG--AAWRDTIGRKTNFNQILEYVKDIRDM-GM----EVCCTLGMLEKHQAIELKKAGLT 130 (320)
Q Consensus 58 ~eei~~~~~~~~~~g~~~i~l~--~g~~~~~ge~~~~~~l~~~i~~~k~~-~~----~i~~~~g~l~~e~l~~L~~aGld 130 (320)
...+.+.++.+.+.|++.+.+. .|... |.. ..-.+.++.+++. .. .+.+++ ..+.++.+.++|+|
T Consensus 18 ~~~l~~~i~~~~~~Gad~i~l~i~Dg~fv----~~~-~~~~~~~~~lr~~~~~~~~v~lmv~d---~~~~i~~~~~agad 89 (228)
T 1h1y_A 18 FANLAAEADRMVRLGADWLHMDIMDGHFV----PNL-TIGAPVIQSLRKHTKAYLDCHLMVTN---PSDYVEPLAKAGAS 89 (228)
T ss_dssp GGGHHHHHHHHHHTTCSEEEEEEEBSSSS----SCB-CBCHHHHHHHHTTCCSEEEEEEESSC---GGGGHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEecCCcC----cch-hhCHHHHHHHHhhcCCcEEEEEEecC---HHHHHHHHHHcCCC
Confidence 4556666777777899877663 22111 100 1112444555532 22 233332 24568888999999
Q ss_pred eeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcC--CCCCCeeeeeeeee
Q 020848 131 AYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL--PTHPESVPINALLA 208 (320)
Q Consensus 131 ~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l--~~~~~~v~~~~~~p 208 (320)
.+.+..+..+ ..+ .+.++.+++.|+.+. +.+. ..+..+. ++.+.+. + ++.+.+....|
T Consensus 90 ~v~vH~~~~~---------~~~---~~~~~~i~~~g~~ig--v~~~-p~t~~e~---~~~~~~~~~~--~d~vl~~sv~p 149 (228)
T 1h1y_A 90 GFTFHIEVSR---------DNW---QELIQSIKAKGMRPG--VSLR-PGTPVEE---VFPLVEAENP--VELVLVMTVEP 149 (228)
T ss_dssp EEEEEGGGCT---------TTH---HHHHHHHHHTTCEEE--EEEC-TTSCGGG---GHHHHHSSSC--CSEEEEESSCT
T ss_pred EEEECCCCcc---------cHH---HHHHHHHHHcCCCEE--EEEe-CCCCHHH---HHHHHhcCCC--CCEEEEEeecC
Confidence 9988664431 111 345566677787765 2222 2333222 2222332 3 56777766655
Q ss_pred cCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccChhHHHHHHHcCCceEeeCCccccCCCCChhHHHHHHH
Q 020848 209 VKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFK 288 (320)
Q Consensus 209 ~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~~~~~~~~~~Gan~~~~~~~~~~~~~~~~~~~~~~i~ 288 (320)
|+.-....+ ..+..++..|.+.++..+.+.+| +.++.-.....+|++.++.|..+... .++.+.++.++
T Consensus 150 --g~~g~~~~~----~~l~~i~~~~~~~~~~pi~v~GG---I~~~ni~~~~~aGaD~vvvGsai~~~--~d~~~~~~~l~ 218 (228)
T 1h1y_A 150 --GFGGQKFMP----EMMEKVRALRKKYPSLDIEVDGG---LGPSTIDVAASAGANCIVAGSSIFGA--AEPGEVISALR 218 (228)
T ss_dssp --TCSSCCCCG----GGHHHHHHHHHHCTTSEEEEESS---CSTTTHHHHHHHTCCEEEESHHHHTS--SCHHHHHHHHH
T ss_pred --CCCcccCCH----HHHHHHHHHHHhcCCCCEEEECC---cCHHHHHHHHHcCCCEEEECHHHHCC--CCHHHHHHHHH
Confidence 322111122 12333444555554434444433 33333345667799999998744432 24555555554
Q ss_pred H
Q 020848 289 V 289 (320)
Q Consensus 289 ~ 289 (320)
+
T Consensus 219 ~ 219 (228)
T 1h1y_A 219 K 219 (228)
T ss_dssp H
T ss_pred H
Confidence 3
No 92
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=88.26 E-value=7.6 Score=32.23 Aligned_cols=92 Identities=21% Similarity=0.172 Sum_probs=56.7
Q ss_pred HHHHHHHcCCCEEEEecccCC-CCCCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHhccCeeccCccccHH
Q 020848 64 AAQKAKEAGSTRFCMGAAWRD-TIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTSRE 141 (320)
Q Consensus 64 ~~~~~~~~g~~~i~l~~g~~~-~~ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~let~~~ 141 (320)
.++.+.+.|+..|.+.+-... ... ... ++.++.++ ..++++....|..+.+.++++.++|++.+.++= .
T Consensus 157 ~~~~~~~~G~~~i~~~~~~~~g~~~-g~~----~~~i~~l~~~~~ipvia~GGI~~~~d~~~~~~~Gadgv~vgs----a 227 (252)
T 1ka9_F 157 WAVKGVELGAGEILLTSMDRDGTKE-GYD----LRLTRMVAEAVGVPVIASGGAGRMEHFLEAFQAGAEAALAAS----V 227 (252)
T ss_dssp HHHHHHHHTCCEEEEEETTTTTTCS-CCC----HHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEESH----H
T ss_pred HHHHHHHcCCCEEEEecccCCCCcC-CCC----HHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHCCCHHHHHHH----H
Confidence 344455579988887642211 111 112 44555555 347888888898889999999999999988761 1
Q ss_pred HHhhhCCCCCHHHHHHHHHHHHHcCCeee
Q 020848 142 FYSKIITTRSYDERLETLKHVREAGINVC 170 (320)
Q Consensus 142 ~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~ 170 (320)
+ +....++.+. .+.+.+.|+.+.
T Consensus 228 l---~~~~~~~~~~---~~~l~~~~~~~~ 250 (252)
T 1ka9_F 228 F---HFGEIPIPKL---KRYLAEKGVHVR 250 (252)
T ss_dssp H---HTTSSCHHHH---HHHHHHTTCCBC
T ss_pred H---HcCCCCHHHH---HHHHHHCCCCcC
Confidence 1 1223366444 445667787654
No 93
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=87.75 E-value=2.4 Score=37.67 Aligned_cols=80 Identities=14% Similarity=0.053 Sum_probs=52.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCC-CCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHhc-cCee
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTI-GRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAG-LTAY 132 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~-ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~aG-ld~v 132 (320)
.+.++..+.++.+.+.|+..+.+..|..... ..+..-..-.++++.++ ..++++..+.|..+.+.++++.+.| +|.|
T Consensus 236 ~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~a~~~l~~G~aD~V 315 (349)
T 3hgj_A 236 WSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAVGLITTPEQAETLLQAGSADLV 315 (349)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCCHHHHHHHHHTTSCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEEECCCCCHHHHHHHHHCCCceEE
Confidence 5678888888888889998888874322110 00000011234555665 3477777776777888888888888 8888
Q ss_pred ccC
Q 020848 133 NHN 135 (320)
Q Consensus 133 ~i~ 135 (320)
.++
T Consensus 316 ~iG 318 (349)
T 3hgj_A 316 LLG 318 (349)
T ss_dssp EES
T ss_pred Eec
Confidence 876
No 94
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=87.33 E-value=2.4 Score=36.59 Aligned_cols=23 Identities=22% Similarity=0.333 Sum_probs=12.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEe
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCMG 79 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l~ 79 (320)
+++++.+.++.+.+.|++.+.+.
T Consensus 153 ~~~~~~~~~~~~~~~G~d~i~l~ 175 (295)
T 1ydn_A 153 TPQAVASVTEQLFSLGCHEVSLG 175 (295)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEec
Confidence 45555555555555555555553
No 95
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=87.05 E-value=7.9 Score=33.44 Aligned_cols=79 Identities=9% Similarity=0.108 Sum_probs=40.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhh-c-Cc--eEEEeCCC-CCHHHHHHHHHhccC
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-M-GM--EVCCTLGM-LEKHQAIELKKAGLT 130 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~-~-~~--~i~~~~g~-l~~e~l~~L~~aGld 130 (320)
.+++++++.++.+.+.|++.+.+... .|- ..-..+.++++.+++ . ++ .+..+|+. +.......-.++|++
T Consensus 156 ~~~~~~~~~~~~~~~~G~d~i~l~DT----~G~-~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aGa~ 230 (302)
T 2ftp_A 156 VDPRQVAWVARELQQMGCYEVSLGDT----IGV-GTAGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIA 230 (302)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEES----SSC-CCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCC----CCC-cCHHHHHHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhCCC
Confidence 45667777776666677777666421 111 122344445555542 2 22 23443333 334444444466777
Q ss_pred eeccCcccc
Q 020848 131 AYNHNLDTS 139 (320)
Q Consensus 131 ~v~i~let~ 139 (320)
.|..++-+.
T Consensus 231 ~vd~tv~Gl 239 (302)
T 2ftp_A 231 VFDSSVAGL 239 (302)
T ss_dssp EEEEBGGGC
T ss_pred EEEeccccc
Confidence 777666554
No 96
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=86.98 E-value=3.4 Score=36.95 Aligned_cols=80 Identities=16% Similarity=0.114 Sum_probs=59.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCC------------CCC--CchhHHHHHHHHHHhh-hc--CceEEEeCCCCCH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRD------------TIG--RKTNFNQILEYVKDIR-DM--GMEVCCTLGMLEK 118 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~------------~~g--e~~~~~~l~~~i~~~k-~~--~~~i~~~~g~l~~ 118 (320)
++.+++.+.++.+.+.|++.|.+.+.... .+| .+...+.-++.++.++ .. .+++..+.|..+.
T Consensus 231 ~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~ 310 (367)
T 3zwt_A 231 LTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSG 310 (367)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCCCH
Confidence 56788999999999999999987543210 111 0223455567788877 34 6888899999999
Q ss_pred HHHHHHHHhccCeeccC
Q 020848 119 HQAIELKKAGLTAYNHN 135 (320)
Q Consensus 119 e~l~~L~~aGld~v~i~ 135 (320)
+.+.++.++|.|.|.++
T Consensus 311 ~da~~~l~~GAd~V~vg 327 (367)
T 3zwt_A 311 QDALEKIRAGASLVQLY 327 (367)
T ss_dssp HHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHcCCCEEEEC
Confidence 99888888999999886
No 97
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=86.75 E-value=10 Score=31.11 Aligned_cols=93 Identities=19% Similarity=0.206 Sum_probs=55.5
Q ss_pred HHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHhccCeeccCccccHHH
Q 020848 64 AAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTSREF 142 (320)
Q Consensus 64 ~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~let~~~~ 142 (320)
.++.+.+.|+..+.+.+-.....+.... .+.++.++ ..++++..+.|..+.+.+.++.++|++.+.++= .+
T Consensus 159 ~~~~~~~~G~d~i~~~~~~~~g~~~~~~----~~~i~~l~~~~~~pvia~GGi~~~~~~~~~~~~Ga~~v~vgs----al 230 (253)
T 1h5y_A 159 WAKEVEELGAGEILLTSIDRDGTGLGYD----VELIRRVADSVRIPVIASGGAGRVEHFYEAAAAGADAVLAAS----LF 230 (253)
T ss_dssp HHHHHHHHTCSEEEEEETTTTTTCSCCC----HHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEESH----HH
T ss_pred HHHHHHhCCCCEEEEecccCCCCcCcCC----HHHHHHHHHhcCCCEEEeCCCCCHHHHHHHHHcCCcHHHHHH----HH
Confidence 3455566799888876432211111122 23344444 246788888888888899999999999988862 22
Q ss_pred HhhhCCCCCHHHHHHHHHHHHHcCCeee
Q 020848 143 YSKIITTRSYDERLETLKHVREAGINVC 170 (320)
Q Consensus 143 ~~~i~~~~~~~~~l~~i~~a~~~Gi~v~ 170 (320)
+. ...+++ +..+.+.+.|+.+.
T Consensus 231 ~~---~~~~~~---~~~~~l~~~g~~~~ 252 (253)
T 1h5y_A 231 HF---RVLSIA---QVKRYLKERGVEVR 252 (253)
T ss_dssp HT---TSSCHH---HHHHHHHHTTCBCC
T ss_pred Hc---CCCCHH---HHHHHHHHcCCCCC
Confidence 22 233443 44455667787653
No 98
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=86.62 E-value=5.8 Score=34.20 Aligned_cols=33 Identities=21% Similarity=0.196 Sum_probs=15.8
Q ss_pred HHHHHHHHHHhhhcCce---EEEeCCCCCHHHHHHH
Q 020848 92 FNQILEYVKDIRDMGME---VCCTLGMLEKHQAIEL 124 (320)
Q Consensus 92 ~~~l~~~i~~~k~~~~~---i~~~~g~l~~e~l~~L 124 (320)
.+++.++++.+.+.|.. +.-|.|..++..+.+|
T Consensus 149 ~~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~l 184 (293)
T 3ewb_X 149 RAFLIEAVQTAIDAGATVINIPDTVGYTNPTEFGQL 184 (293)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSSSCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEecCCCCCCCHHHHHHH
Confidence 34555555555544433 2334555555554444
No 99
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=86.58 E-value=2.9 Score=35.04 Aligned_cols=196 Identities=11% Similarity=0.148 Sum_probs=102.5
Q ss_pred HHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHhccCeeccCccccHH
Q 020848 63 QAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTSRE 141 (320)
Q Consensus 63 ~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~let~~~ 141 (320)
+.++.+.+.|++++++..-+....+.+.. .++++.+. +..+++.+-.|..+.+.++.+.++|+++|.++-...
T Consensus 35 ~~a~~~~~~gad~lhvvDld~a~~~~~~~----~~~i~~i~~~~~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~a~-- 108 (243)
T 4gj1_A 35 KKFKEYEKAGAKELHLVDLTGAKDPSKRQ----FALIEKLAKEVSVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAI-- 108 (243)
T ss_dssp HHHHHHHHHTCCEEEEEEHHHHHCGGGCC----HHHHHHHHHHCCSEEEEESSCCCHHHHHHHHHTTCSEEEECTTTT--
T ss_pred HHHHHHHHCCCCEEEEEecCcccccchhH----HHHHHHHHHhcCCCeEeccccccHHHHHHHHHcCCCEEEEccccc--
Confidence 34566777899999886421111222323 34444444 567889999999999999999999999999875443
Q ss_pred HHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEE------EEe-C---CCHHHHHHHHHHHhcCCCCCCeeeeeeeeecCC
Q 020848 142 FYSKIITTRSYDERLETLKHVREAGINVCSGGI------IGL-G---EAEEDRVGLLHTLATLPTHPESVPINALLAVKG 211 (320)
Q Consensus 142 ~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i------~Gl-g---et~ed~~~~l~~l~~l~~~~~~v~~~~~~p~~g 211 (320)
.+++-+.+..+..-..-+-+.++.. +-. + .+.-++.+.++.+.+++ +..+-+.. +-..|
T Consensus 109 --------~~p~li~e~~~~~g~q~iv~~iD~~~~~~~~v~~~gw~~~~~~~~~~~~~~~~~~g--~~eil~t~-Id~DG 177 (243)
T 4gj1_A 109 --------KDATLCLEILKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYSNKG--LKHILCTD-ISKDG 177 (243)
T ss_dssp --------TCHHHHHHHHHHHCTTTEEEEEEEEESSSEEEC--------CCBHHHHHHHHHTTT--CCEEEEEE-TTC--
T ss_pred --------cCCchHHHHHhcccCceEEEEEEEEeCCCCEEEecCceecccchHHHHHHHHhhcC--CcEEEeee-ecccc
Confidence 2232222322222211122333332 111 2 12224567777777887 44443322 23346
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccChhHHHHHHHcCCceEeeCCccccCCCCChhHHHHHH
Q 020848 212 TPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMF 287 (320)
Q Consensus 212 t~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~~~~~~~~~~Gan~~~~~~~~~~~~~~~~~~~~~~i 287 (320)
|. ..++.+. ++ ..+...++..+-+++|-.++ .+...+..+++.+..|..+ ..+.-+.+|.++.+
T Consensus 178 t~----~G~d~~l-~~---~l~~~~~~ipviasGGv~~~---~Dl~~l~~~~~gvivg~Al-~~g~i~l~ea~~~l 241 (243)
T 4gj1_A 178 TM----QGVNVRL-YK---LIHEIFPNICIQASGGVASL---KDLENLKGICSGVIVGKAL-LDGVFSVEEGIRCL 241 (243)
T ss_dssp -------CCCHHH-HH---HHHHHCTTSEEEEESCCCSH---HHHHHTTTTCSEEEECHHH-HTTSSCHHHHHHHH
T ss_pred cc----cCCCHHH-HH---HHHHhcCCCCEEEEcCCCCH---HHHHHHHccCchhehHHHH-HCCCCCHHHHHHHh
Confidence 54 2344443 23 23334555444455543332 2234456677777777633 34456777766654
No 100
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=86.46 E-value=5 Score=34.91 Aligned_cols=101 Identities=18% Similarity=0.135 Sum_probs=57.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCC-C----CchhHHHHHHHHHHhhhc-C--ceE--EEeC----CCCC-HHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTI-G----RKTNFNQILEYVKDIRDM-G--MEV--CCTL----GMLE-KHQ 120 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~-g----e~~~~~~l~~~i~~~k~~-~--~~i--~~~~----g~l~-~e~ 120 (320)
.+.+++...+..+.+.|++.|+...|+.+.. | .|..+++-.++++.+++. | +.+ ...+ ..-+ +..
T Consensus 83 ~~~~~l~~~L~~~~~~GI~niLaLrGD~p~~~g~~~~~~~~f~~a~~Lv~~ir~~~g~~f~igvA~yPE~Hp~~~~~~~d 162 (310)
T 3apt_A 83 QSRKEVAEVLHRFVESGVENLLALRGDPPRGERVFRPHPEGFRYAAELVALIRERYGDRVSVGGAAYPEGHPESESLEAD 162 (310)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEECCCCSTTCCSCCCCTTSCSSHHHHHHHHHHHHGGGSEEEEEECTTCCTTSSCHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhCCCCeEEEEEeCCCcCCCCCCHHHH
Confidence 6889999999988999999998877766543 3 122244555666666543 2 332 2222 1122 223
Q ss_pred HHHH---HHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCe
Q 020848 121 AIEL---KKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGIN 168 (320)
Q Consensus 121 l~~L---~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~ 168 (320)
++.| .++|.|.+--- .-.+.+.+.+.++.+++.|+.
T Consensus 163 ~~~Lk~Kv~aGAdf~iTQ------------~ffD~~~~~~f~~~~r~~Gi~ 201 (310)
T 3apt_A 163 LRHFKAKVEAGLDFAITQ------------LFFNNAHYFGFLERARRAGIG 201 (310)
T ss_dssp HHHHHHHHHHHCSEEEEC------------CCSCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCCEEEec------------ccCCHHHHHHHHHHHHHcCCC
Confidence 4444 35677643221 123555666666777777754
No 101
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=86.36 E-value=13 Score=30.70 Aligned_cols=129 Identities=15% Similarity=0.191 Sum_probs=77.7
Q ss_pred HHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCe
Q 020848 121 AIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPES 200 (320)
Q Consensus 121 l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~ 200 (320)
+..++++|++.+.++..- |...+.+.-+.++.+.+.|+.+ ++-.|++.+. +.+..++ +.
T Consensus 78 ~~~l~~~Ga~~Vllghse---------RR~~~~e~~~k~~~A~~~GL~~----ivcVge~~e~-----~~~~~~~--~~- 136 (226)
T 1w0m_A 78 LENIKEAGGSGVILNHSE---------APLKLNDLARLVAKAKSLGLDV----VVCAPDPRTS-----LAAAALG--PH- 136 (226)
T ss_dssp HHHHHHHTCCEEEECCTT---------SCCBHHHHHHHHHHHHHTTCEE----EEEESSHHHH-----HHHHHTC--CS-
T ss_pred HHHHHHcCCCEEEEeeee---------ccCCHHHHHHHHHHHHHCCCEE----EEEeCCHHHH-----HHHhcCC--CC-
Confidence 788899999999886522 2234556677888899999864 5556766554 2234454 33
Q ss_pred eeeeeeeecC--CCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccChhHHHHHHHcCCceEeeCCccccC
Q 020848 201 VPINALLAVK--GTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTT 275 (320)
Q Consensus 201 v~~~~~~p~~--gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~~~~~~~~~~Gan~~~~~~~~~~~ 275 (320)
+..+-|.- ||... ....++++.....+..|.+.++..+-..+| ++ .++........|++.++.|+..+..
T Consensus 137 --iIayep~waiGtG~~-v~t~~~d~~~~~~~~ir~~~~~~~ilyggs-V~-~~n~~~~~~~~giDG~LVG~a~l~a 208 (226)
T 1w0m_A 137 --AVAVEPPELIGTGRA-VSRYKPEAIVETVGLVSRHFPEVSVITGAG-IE-SGDDVAAALRLGTRGVLLASAAVKA 208 (226)
T ss_dssp --EEEECCGGGTTTSCC-HHHHCHHHHHHHHHHHHHHCTTSEEEEESS-CC-SHHHHHHHHHTTCSEEEECHHHHTC
T ss_pred --EEEEcChhhhccCCC-CCCCChhHHHHHHHHHHhccCCCEEEEeCC-CC-cHHHHHHHHhCCCCEEEECHHHHCC
Confidence 44555532 54311 013566766777777887765543333222 22 1333345567899999998755543
No 102
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=86.22 E-value=13 Score=30.63 Aligned_cols=128 Identities=14% Similarity=0.175 Sum_probs=77.6
Q ss_pred HHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCe
Q 020848 121 AIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPES 200 (320)
Q Consensus 121 l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~ 200 (320)
+..|+++|++.+.++..- |...+.+.-+.++.+.+.|+.+ ++-.|++.+. +.+..++ +.
T Consensus 81 ~~~l~~~Ga~~Vllghse---------RR~~~~e~~~k~~~A~~~GL~~----ivcVge~~e~-----~~~~~~~--~~- 139 (225)
T 1hg3_A 81 PEAVKEAGAVGTLLNHSE---------NRMILADLEAAIRRAEEVGLMT----MVCSNNPAVS-----AAVAALN--PD- 139 (225)
T ss_dssp HHHHHHTTCCEEEESCGG---------GCCBHHHHHHHHHHHHHHTCEE----EEEESSHHHH-----HHHHTTC--CS-
T ss_pred HHHHHHcCCCEEEECcch---------hcCCHHHHHHHHHHHHHCCCEE----EEEeCCHHHH-----HHHhcCC--CC-
Confidence 788899999999887522 1234555677888899999865 5556776654 2234554 33
Q ss_pred eeeeeeeecC--CCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccChhHHHHHHHcCCceEeeCCcccc
Q 020848 201 VPINALLAVK--GTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLT 274 (320)
Q Consensus 201 v~~~~~~p~~--gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~~~~~~~~~~Gan~~~~~~~~~~ 274 (320)
+..|-|.- ||... ....++++.....+..|.+.++..+-..+| ++ .++........|++.++.|+..+.
T Consensus 140 --iIayep~waiGtG~~-v~t~~~d~~~~~~~~ir~~~~~~~ilyggs-V~-~~n~~~~~~~~~vDG~LVG~a~l~ 210 (225)
T 1hg3_A 140 --YVAVEPPELIGTGIP-VSKAKPEVITNTVELVKKVNPEVKVLCGAG-IS-TGEDVKKAIELGTVGVLLASGVTK 210 (225)
T ss_dssp --EEEECCTTTTTTSCC-TTTSCTHHHHHHHHHHHHHCTTSEEEEESS-CC-SHHHHHHHHHTTCSEEEESHHHHT
T ss_pred --EEEEeChhhhccCCC-CCCCChhHHHHHHHHHHhccCCCEEEEeCC-CC-cHHHHHHHHhCCCCEEEeCHHHHC
Confidence 55555542 55321 123556666677777787765543333222 22 133334556789999999875553
No 103
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=86.04 E-value=12 Score=30.11 Aligned_cols=163 Identities=17% Similarity=0.126 Sum_probs=90.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh-hcCceEEEe-CCCCCHHHHHHHHHhccCeec
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEVCCT-LGMLEKHQAIELKKAGLTAYN 133 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k-~~~~~i~~~-~g~l~~e~l~~L~~aGld~v~ 133 (320)
.+++++.+.++.+.+.|++.+.+...+ +.. .+.++.++ ..+..+.+. .+..+.+.++...++|.|.|.
T Consensus 16 ~d~~~~~~~~~~~~~~G~~~i~l~~~~------~~~----~~~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~~~Gad~V~ 85 (212)
T 2v82_A 16 ITPDEALAHVGAVIDAGFDAVEIPLNS------PQW----EQSIPAIVDAYGDKALIGAGTVLKPEQVDALARMGCQLIV 85 (212)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEETTS------TTH----HHHHHHHHHHHTTTSEEEEECCCSHHHHHHHHHTTCCEEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCC------hhH----HHHHHHHHHhCCCCeEEEeccccCHHHHHHHHHcCCCEEE
Confidence 578899999999989999988875321 222 23444444 334443332 234678899999999999987
Q ss_pred cCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeeeeeeecCCCC
Q 020848 134 HNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTP 213 (320)
Q Consensus 134 i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~~~p~~gt~ 213 (320)
++.. + .+.++.+++.|.++ ++|. .|.+++. .+.+.| ++.+.++ | +.
T Consensus 86 ~~~~-------------~----~~~~~~~~~~g~~~----~~g~-~t~~e~~----~a~~~G--~d~v~v~---~--t~- 131 (212)
T 2v82_A 86 TPNI-------------H----SEVIRRAVGYGMTV----CPGC-ATATEAF----TALEAG--AQALKIF---P--SS- 131 (212)
T ss_dssp CSSC-------------C----HHHHHHHHHTTCEE----ECEE-CSHHHHH----HHHHTT--CSEEEET---T--HH-
T ss_pred eCCC-------------C----HHHHHHHHHcCCCE----Eeec-CCHHHHH----HHHHCC--CCEEEEe---c--CC-
Confidence 4321 1 12345666778664 3332 4666643 234566 6666641 1 10
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhCC-CceeecCCcccccChhHHHHHHHcCCceEeeCCcccc
Q 020848 214 LQDQKPVEIWEMIRMIATARIVMP-KAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLT 274 (320)
Q Consensus 214 ~~~~~~~~~~e~~~~~a~~R~~~p-~~~i~~~~g~~~~~~~~~~~~~~~Gan~~~~~~~~~~ 274 (320)
... ...+...+...+ +..+-..+| .+ .+.-...+.+|++.+..|..+..
T Consensus 132 -----~~g----~~~~~~l~~~~~~~ipvia~GG-I~--~~~i~~~~~~Ga~gv~vGsai~~ 181 (212)
T 2v82_A 132 -----AFG----PQYIKALKAVLPSDIAVFAVGG-VT--PENLAQWIDAGCAGAGLGSDLYR 181 (212)
T ss_dssp -----HHC----HHHHHHHHTTSCTTCEEEEESS-CC--TTTHHHHHHHTCSEEEECTTTCC
T ss_pred -----CCC----HHHHHHHHHhccCCCeEEEeCC-CC--HHHHHHHHHcCCCEEEEChHHhC
Confidence 111 222333333444 222322333 22 22234556789999988875543
No 104
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=85.94 E-value=3 Score=39.02 Aligned_cols=119 Identities=16% Similarity=0.170 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhc--CceEEEeCCCCCHHHHHHHHHhccCeeccCc
Q 020848 59 DAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTLGMLEKHQAIELKKAGLTAYNHNL 136 (320)
Q Consensus 59 eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~--~~~i~~~~g~l~~e~l~~L~~aGld~v~i~l 136 (320)
++-.+.+..+.+.|++-+++-+. .| .-+..++.++.+|+. ++.+..- +..+.+..+.|.++|+|.|.+++
T Consensus 280 ~d~~eR~~aLv~AGvD~iviD~a----hG---hs~~v~~~i~~ik~~~p~~~viaG-NVaT~e~a~~Li~aGAD~vkVGi 351 (556)
T 4af0_A 280 PGDKDRLKLLAEAGLDVVVLDSS----QG---NSVYQIEFIKWIKQTYPKIDVIAG-NVVTREQAAQLIAAGADGLRIGM 351 (556)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCS----CC---CSHHHHHHHHHHHHHCTTSEEEEE-EECSHHHHHHHHHHTCSEEEECS
T ss_pred ccHHHHHHHHHhcCCcEEEEecc----cc---ccHHHHHHHHHHHhhCCcceEEec-cccCHHHHHHHHHcCCCEEeecC
Confidence 34566778888999998888542 23 235678888888854 4444332 24789999999999999998876
Q ss_pred ccc-HHHHhhhCC-C-CCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHH
Q 020848 137 DTS-REFYSKIIT-T-RSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLL 188 (320)
Q Consensus 137 et~-~~~~~~i~~-~-~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l 188 (320)
=.. -=+-+.+.. + ..+..+.+..+.+++.|+++..+-=+ .+..|+...+
T Consensus 352 GpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~~vpvIADGGI---~~sGDi~KAl 403 (556)
T 4af0_A 352 GSGSICITQEVMAVGRPQGTAVYAVAEFASRFGIPCIADGGI---GNIGHIAKAL 403 (556)
T ss_dssp SCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGGTCCEEEESCC---CSHHHHHHHH
T ss_pred CCCcccccccccCCCCcHHHHHHHHHHHHHHcCCCEEecCCc---CcchHHHHHh
Confidence 332 100011111 1 13566677778888888775333211 3555666554
No 105
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=85.87 E-value=15 Score=30.89 Aligned_cols=175 Identities=14% Similarity=0.053 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHhccCeeccCcc
Q 020848 59 DAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLD 137 (320)
Q Consensus 59 eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~le 137 (320)
....+.++.+.+.|+..+.+.+...-..|. .+ .++.++ ..++++....+..++.++.+.+.+|.|.|.+...
T Consensus 65 ~~p~~~A~~~~~~GA~~isvlt~~~~f~G~---~~----~l~~i~~~v~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~ 137 (254)
T 1vc4_A 65 VDPVEAALAYARGGARAVSVLTEPHRFGGS---LL----DLKRVREAVDLPLLRKDFVVDPFMLEEARAFGASAALLIVA 137 (254)
T ss_dssp CCHHHHHHHHHHTTCSEEEEECCCSSSCCC---HH----HHHHHHHHCCSCEEEESCCCSHHHHHHHHHTTCSEEEEEHH
T ss_pred CCHHHHHHHHHHcCCCEEEEecchhhhccC---HH----HHHHHHHhcCCCEEECCcCCCHHHHHHHHHcCCCEEEECcc
Confidence 345566677778999999886532222232 22 222333 4577877777778898999999999999998753
Q ss_pred ccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeeeeeeecCCCCCCCC
Q 020848 138 TSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQ 217 (320)
Q Consensus 138 t~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~~~p~~gt~~~~~ 217 (320)
..+ ++..+.++.+++.|+.+- +-. .+++++. .+.+++ .+.+++++... +.+
T Consensus 138 ~l~------------~~l~~l~~~a~~lGl~~l----vev-~~~~E~~----~a~~~g--ad~IGvn~~~l---~~~--- 188 (254)
T 1vc4_A 138 LLG------------ELTGAYLEEARRLGLEAL----VEV-HTERELE----IALEAG--AEVLGINNRDL---ATL--- 188 (254)
T ss_dssp HHG------------GGHHHHHHHHHHHTCEEE----EEE-CSHHHHH----HHHHHT--CSEEEEESBCT---TTC---
T ss_pred chH------------HHHHHHHHHHHHCCCeEE----EEE-CCHHHHH----HHHHcC--CCEEEEccccC---cCC---
Confidence 221 233455666777786642 322 3556654 333445 56777766442 112
Q ss_pred CCCCHHHHHHHHHHHHHhCCCceeecCCcccccC-hhHHHHHHHcCCceEeeCCcccc
Q 020848 218 KPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFS-MPEQALCFLAGANSIFTGEKLLT 274 (320)
Q Consensus 218 ~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~-~~~~~~~~~~Gan~~~~~~~~~~ 274 (320)
.++.+...++........++..+-..+ ++. ++.-..... |++.+.+|+.+..
T Consensus 189 -~~dl~~~~~L~~~i~~~~~~~~vIAeg---GI~s~~dv~~l~~-Ga~gvlVGsAl~~ 241 (254)
T 1vc4_A 189 -HINLETAPRLGRLARKRGFGGVLVAES---GYSRKEELKALEG-LFDAVLIGTSLMR 241 (254)
T ss_dssp -CBCTTHHHHHHHHHHHTTCCSEEEEES---CCCSHHHHHTTTT-TCSEEEECHHHHT
T ss_pred -CCCHHHHHHHHHhCccccCCCeEEEEc---CCCCHHHHHHHHc-CCCEEEEeHHHcC
Confidence 223333333332221111122222222 233 333344456 9999999975553
No 106
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=85.73 E-value=18 Score=31.89 Aligned_cols=203 Identities=13% Similarity=0.073 Sum_probs=110.5
Q ss_pred CHHHHHHHHHHHHHcCCC-----EEEEecccCCC---------CCCc---------hhHHHHHHHHHHhhhcCceEEEeC
Q 020848 57 TKDAVMQAAQKAKEAGST-----RFCMGAAWRDT---------IGRK---------TNFNQILEYVKDIRDMGMEVCCTL 113 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~-----~i~l~~g~~~~---------~ge~---------~~~~~l~~~i~~~k~~~~~i~~~~ 113 (320)
+.+...+.++.+.+.|.. .|.||.-...+ .... +..+.+.++.+..++.|+.+.+++
T Consensus 19 dle~Ak~lI~~A~~aGad~~~d~avKfQt~~~d~l~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~~~~~~~Gi~~~st~ 98 (350)
T 3g8r_A 19 NVEHGVALIRAIRESCQGFDFDFGFKLQYRNLDTFIHSSFKGRDDVKYVKRFEETRLQPEQMQKLVAEMKANGFKAICTP 98 (350)
T ss_dssp CSHHHHHHHHHHHHHTTTCCSEEEEEEEECCHHHHBCGGGTTCCSSSSHHHHHHTCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred cHHHHHHHHHHHHHhCCcccCCeeEEccccchhhhcChhccCccHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCcEEecc
Confidence 456777777777777876 88887421100 0000 223445556666667899876654
Q ss_pred CCCCHHHHHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEe-CCCHHHHHHHHHHHh
Q 020848 114 GMLEKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL-GEAEEDRVGLLHTLA 192 (320)
Q Consensus 114 g~l~~e~l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl-get~ed~~~~l~~l~ 192 (320)
++.+.++.|.+.|++.+.|+--. -.+ +.-++.+.+.|.++ ++-. .-|.+|+...++++.
T Consensus 99 --fD~~svd~l~~~~v~~~KI~S~~----------~~N----~pLL~~va~~gKPv----iLstGmstl~Ei~~Ave~i~ 158 (350)
T 3g8r_A 99 --FDEESVDLIEAHGIEIIKIASCS----------FTD----WPLLERIARSDKPV----VASTAGARREDIDKVVSFML 158 (350)
T ss_dssp --CSHHHHHHHHHTTCCEEEECSSS----------TTC----HHHHHHHHTSCSCE----EEECTTCCHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHcCCCEEEECccc----------ccC----HHHHHHHHhhCCcE----EEECCCCCHHHHHHHHHHHH
Confidence 78899999999999988885200 112 24456666667664 3323 149999999999999
Q ss_pred cCCCCCCeeeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccChhHHHHHHHcCCceE---eeC
Q 020848 193 TLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSI---FTG 269 (320)
Q Consensus 193 ~l~~~~~~v~~~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~~~~~~~~~~Gan~~---~~~ 269 (320)
+-| .+ +.+. ....+ + |.+..+--++.+...+..+|+..+-.+.-..+-.......++..||..+ ++-
T Consensus 159 ~~g--~~-viLl--hC~s~--Y---Pt~~~~~nL~aI~~Lk~~fp~lpVG~SdHt~g~~~~~~~AAvAlGA~vIEkH~tl 228 (350)
T 3g8r_A 159 HRG--KD-LTIM--HCVAE--Y---PTPDDHLHLARIKTLRQQYAGVRIGYSTHEDPDLMEPIMLAVAQGATVFEKHVGL 228 (350)
T ss_dssp TTT--CC-EEEE--ECCCC--S---SCCGGGCCTTHHHHHHHHCTTSEEEEEECCCSSCCHHHHHHHHTTCCEEEEEBCC
T ss_pred HcC--CC-EEEE--ecCCC--C---CCCcccCCHHHHHHHHHHCCCCCEEcCCCCCCCccHHHHHHHHcCCCEEEEecCc
Confidence 876 32 3332 11111 1 1111111245566667777654332221000000122346778899755 344
Q ss_pred CccccCC---CCChhHHHHHHHH
Q 020848 270 EKLLTTP---NNDFDADQLMFKV 289 (320)
Q Consensus 270 ~~~~~~~---~~~~~~~~~~i~~ 289 (320)
++--..+ ..++++..+|+++
T Consensus 229 dr~~g~D~~~Sl~P~ef~~lv~~ 251 (350)
T 3g8r_A 229 PTDQYGINNYSANPEQVRRWLAA 251 (350)
T ss_dssp CBTTBCCCTTCBCHHHHHHHHHH
T ss_pred ccCCCCcccccCCHHHHHHHHHH
Confidence 4310111 1356666655544
No 107
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=85.69 E-value=14 Score=30.66 Aligned_cols=175 Identities=19% Similarity=0.226 Sum_probs=103.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeC----CCCC----HHHHHHHHHh
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTL----GMLE----KHQAIELKKA 127 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~----g~l~----~e~l~~L~~a 127 (320)
.+.++|.+.++++.+.|+..+|+. |.+.+...+.+ +..++.+.+-. |..+ ..+.++-.+.
T Consensus 40 ~t~~~i~~lc~eA~~~~~~aVcV~---------p~~v~~a~~~L---~~s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~ 107 (239)
T 3ngj_A 40 ATEEQIRKLCSEAAEYKFASVCVN---------PTWVPLCAELL---KGTGVKVCTVIGFPLGATPSEVKAYETKVAVEQ 107 (239)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEC---------GGGHHHHHHHH---TTSSCEEEEEESTTTCCSCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHhcCCcEEEEC---------HHHHHHHHHHh---CCCCCeEEEEeccCCCCCchHHHHHHHHHHHHc
Confidence 688999999999999999999984 44555554443 44456654333 3322 2244455566
Q ss_pred ccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHc--CCeeeeeEEEEeC-CCHHHHHHHHHHHhcCCCCCCeeeee
Q 020848 128 GLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREA--GINVCSGGIIGLG-EAEEDRVGLLHTLATLPTHPESVPIN 204 (320)
Q Consensus 128 Gld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~--Gi~v~~~~i~Glg-et~ed~~~~l~~l~~l~~~~~~v~~~ 204 (320)
|.|.|.+-+.-. .+ ...+|+.+++-|+..++. +. .+-+|+-.+ -+++++....+.+.+.| .+.|...
T Consensus 108 GAdEIDmViNig-~l-----k~g~~~~v~~eI~~v~~a~~~~--~lKVIlEt~~Lt~eei~~a~~ia~~aG--ADfVKTS 177 (239)
T 3ngj_A 108 GAEEVDMVINIG-MV-----KAKKYDDVEKDVKAVVDASGKA--LTKVIIECCYLTNEEKVEVCKRCVAAG--AEYVKTS 177 (239)
T ss_dssp TCSEEEEECCHH-HH-----HTTCHHHHHHHHHHHHHHHTTS--EEEEECCGGGSCHHHHHHHHHHHHHHT--CSEEECC
T ss_pred CCCEEEEEeehH-Hh-----ccccHHHHHHHHHHHHHHhcCC--ceEEEEecCCCCHHHHHHHHHHHHHHC--cCEEECC
Confidence 999887755432 11 146777787777776664 32 233344332 47888888889999998 6766654
Q ss_pred -eeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccChhHHHHHHHcCCceE
Q 020848 205 -ALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSI 266 (320)
Q Consensus 205 -~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~~~~~~~~~~Gan~~ 266 (320)
.|.+ ...+.++...+... .-+...+..++|--.. ......+.+||+++
T Consensus 178 TGf~~---------ggAt~~dv~lmr~~---vg~~v~VKasGGIrt~--~da~~~i~aGA~ri 226 (239)
T 3ngj_A 178 TGFGT---------HGATPEDVKLMKDT---VGDKALVKAAGGIRTF--DDAMKMINNGASRI 226 (239)
T ss_dssp CSSSS---------CCCCHHHHHHHHHH---HGGGSEEEEESSCCSH--HHHHHHHHTTEEEE
T ss_pred CCCCC---------CCCCHHHHHHHHHh---hCCCceEEEeCCCCCH--HHHHHHHHhcccce
Confidence 2321 23445543333222 2334455666553222 33456678999977
No 108
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=85.23 E-value=5.3 Score=36.62 Aligned_cols=80 Identities=10% Similarity=0.126 Sum_probs=59.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCC----------CCC--chhHHHHHHHHHHhhh-c--CceEEEeCCCCCHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDT----------IGR--KTNFNQILEYVKDIRD-M--GMEVCCTLGMLEKHQ 120 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~----------~ge--~~~~~~l~~~i~~~k~-~--~~~i~~~~g~l~~e~ 120 (320)
++.+++.+.++.+.+.|++.|.+.+++... +|- +...+.-+++++.+++ . ++++..+.|..+.+.
T Consensus 308 ~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~D 387 (443)
T 1tv5_A 308 LNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLD 387 (443)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHHH
Confidence 567799999999999999999887643210 110 1123445677888773 4 688888999999999
Q ss_pred HHHHHHhccCeeccC
Q 020848 121 AIELKKAGLTAYNHN 135 (320)
Q Consensus 121 l~~L~~aGld~v~i~ 135 (320)
+.+...+|.|.|.++
T Consensus 388 A~e~l~aGAd~Vqig 402 (443)
T 1tv5_A 388 ALEKIEAGASVCQLY 402 (443)
T ss_dssp HHHHHHTTEEEEEES
T ss_pred HHHHHHcCCCEEEEc
Confidence 999889999998876
No 109
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=84.89 E-value=15 Score=30.06 Aligned_cols=194 Identities=13% Similarity=0.111 Sum_probs=94.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhc-Cce--E--EEeCCCCCHHHHHHHHHhccCe
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM-GME--V--CCTLGMLEKHQAIELKKAGLTA 131 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~-~~~--i--~~~~g~l~~e~l~~L~~aGld~ 131 (320)
+++.+.+.++.+.+.|++-+.+.-.+.... +.. ..-.+.++.+++. +.. + .+++ ..+.++.+.++|+|.
T Consensus 21 d~~~~~~~i~~~~~~G~d~i~l~~~dg~f~--~~~-~~~~~~i~~l~~~~~~~~~v~l~vnd---~~~~v~~~~~~Gad~ 94 (230)
T 1rpx_A 21 NFSKLGEQVKAIEQAGCDWIHVDVMDGRFV--PNI-TIGPLVVDSLRPITDLPLDVHLMIVE---PDQRVPDFIKAGADI 94 (230)
T ss_dssp CGGGHHHHHHHHHHTTCCCEEEEEEBSSSS--SCB-CCCHHHHHHHGGGCCSCEEEEEESSS---HHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeeccCCcc--ccc-ccCHHHHHHHHhccCCcEEEEEEecC---HHHHHHHHHHcCCCE
Confidence 345666677777778988777642110110 000 1113555666643 333 2 2222 346789999999999
Q ss_pred eccCcc--ccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeeeeeeec
Q 020848 132 YNHNLD--TSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAV 209 (320)
Q Consensus 132 v~i~le--t~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~~~p~ 209 (320)
+.+..+ .. ... .+.++.+++.|+.+...+. .+ +..+.. ..+....+.+-+..+.|
T Consensus 95 v~vh~~~~~~----------~~~---~~~~~~~~~~g~~ig~~~~--p~-t~~e~~------~~~~~~~d~vl~~~~~p- 151 (230)
T 1rpx_A 95 VSVHCEQSST----------IHL---HRTINQIKSLGAKAGVVLN--PG-TPLTAI------EYVLDAVDLVLIMSVNP- 151 (230)
T ss_dssp EEEECSTTTC----------SCH---HHHHHHHHHTTSEEEEEEC--TT-CCGGGG------TTTTTTCSEEEEESSCT-
T ss_pred EEEEecCccc----------hhH---HHHHHHHHHcCCcEEEEeC--CC-CCHHHH------HHHHhhCCEEEEEEEcC-
Confidence 987664 31 122 3445666667766544432 22 322221 11111256665445444
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHhCC----CceeecCCcccccChhHHHHHHHcCCceEeeCCccccCCCCChhHHHH
Q 020848 210 KGTPLQDQKPVEIWEMIRMIATARIVMP----KAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQL 285 (320)
Q Consensus 210 ~gt~~~~~~~~~~~e~~~~~a~~R~~~p----~~~i~~~~g~~~~~~~~~~~~~~~Gan~~~~~~~~~~~~~~~~~~~~~ 285 (320)
|..-.... .+.. ..+...|...+ +..+-+.+| +.++.....+.+|++.+..|..+... .++.+.++
T Consensus 152 -g~~g~~~~-~~~~---~~i~~l~~~~~~~~~~~pi~v~GG---I~~~n~~~~~~aGad~vvvgSaI~~a--~dp~~a~~ 221 (230)
T 1rpx_A 152 -GFGGQSFI-ESQV---KKISDLRKICAERGLNPWIEVDGG---VGPKNAYKVIEAGANALVAGSAVFGA--PDYAEAIK 221 (230)
T ss_dssp -TCSSCCCC-TTHH---HHHHHHHHHHHHHTCCCEEEEESS---CCTTTHHHHHHHTCCEEEESHHHHTS--SCHHHHHH
T ss_pred -CCCCcccc-HHHH---HHHHHHHHHHHhcCCCceEEEECC---CCHHHHHHHHHcCCCEEEEChhhhCC--CCHHHHHH
Confidence 32211111 2222 22222333322 222333332 33333344677899999988755432 34666666
Q ss_pred HHHH
Q 020848 286 MFKV 289 (320)
Q Consensus 286 ~i~~ 289 (320)
.+++
T Consensus 222 ~l~~ 225 (230)
T 1rpx_A 222 GIKT 225 (230)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 6654
No 110
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=84.70 E-value=15 Score=30.19 Aligned_cols=184 Identities=13% Similarity=0.098 Sum_probs=105.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeCCC----CC----HHHHHHHHHh
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGM----LE----KHQAIELKKA 127 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~----l~----~e~l~~L~~a 127 (320)
.+.++|.+.++++.+.|+..+|+. |.+.+...+.++ . +.+++..|. .+ ..+.+. .+.
T Consensus 14 ~t~~~i~~l~~~A~~~~~~aVcv~---------p~~v~~a~~~l~---g--v~v~tvigFP~G~~~~~~k~~E~~~-i~~ 78 (226)
T 1vcv_A 14 LTVDEAVAGARKAEELGVAAYCVN---------PIYAPVVRPLLR---K--VKLCVVADFPFGALPTASRIALVSR-LAE 78 (226)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEC---------GGGHHHHGGGCS---S--SEEEEEESTTTCCSCHHHHHHHHHH-HTT
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEC---------HHHHHHHHHHhC---C--CeEEEEeCCCCCCCchHHHHHHHHH-HHC
Confidence 689999999999999999999984 334443333222 2 554433332 22 245666 788
Q ss_pred ccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEe-CCCHHHHHHHHHHHhcCCCCCCeeeeee-
Q 020848 128 GLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL-GEAEEDRVGLLHTLATLPTHPESVPINA- 205 (320)
Q Consensus 128 Gld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl-get~ed~~~~l~~l~~l~~~~~~v~~~~- 205 (320)
|.|.|.+-+.-. .+ ...+|+.+.+-|+..+++--...+-+|+-. --+++++....+...+.| .+.|.-..
T Consensus 79 GAdEID~Vinig-----~~-~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~Lt~eei~~a~~ia~eaG--ADfVKTSTG 150 (226)
T 1vcv_A 79 VADEIDVVAPIG-----LV-KSRRWAEVRRDLISVVGAAGGRVVKVITEEPYLRDEERYTLYDIIAEAG--AHFIKSSTG 150 (226)
T ss_dssp TCSEEEEECCHH-----HH-HTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHHT--CSEEECCCS
T ss_pred CCCEEEEecchh-----hh-cCCCHHHHHHHHHHHHHHHcCCCceEEEeccCCCHHHHHHHHHHHHHcC--CCEEEeCCC
Confidence 998887655331 11 145788888877777764211233444434 236888999999999998 66665531
Q ss_pred eeecC-CCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccChhHHHHHHHc---CCc
Q 020848 206 LLAVK-GTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLA---GAN 264 (320)
Q Consensus 206 ~~p~~-gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~~~~~~~~~~---Gan 264 (320)
|.|.. .++..+....+.++...+....+..-+...+..++|--. .+.....+.+ |++
T Consensus 151 f~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g~~v~vKaaGGirt--~~~al~~i~a~~~Ga~ 211 (226)
T 1vcv_A 151 FAEEAYAARQGNPVHSTPERAAAIARYIKEKGYRLGVKMAGGIRT--REQAKAIVDAIGWGED 211 (226)
T ss_dssp CCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHTCCCEEEEESSCCS--HHHHHHHHHHHCSCSC
T ss_pred CCccccccccCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCC--HHHHHHHHHHHHCCCC
Confidence 22100 111222345667665544444444455566666654322 2222345556 877
No 111
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=84.64 E-value=18 Score=30.76 Aligned_cols=186 Identities=16% Similarity=0.132 Sum_probs=98.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCCCC-CCchh-------------HHHHHHHHHHhhh--cCceE-EE---eC--C
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTI-GRKTN-------------FNQILEYVKDIRD--MGMEV-CC---TL--G 114 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l~~g~~~~~-ge~~~-------------~~~l~~~i~~~k~--~~~~i-~~---~~--g 114 (320)
+++..++.++.+.+.|++-+-|+-....+. ..|.. .+.++++++.+++ ..+++ .. |+ .
T Consensus 32 ~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~ 111 (271)
T 3nav_A 32 NPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANLVYA 111 (271)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHH
Confidence 578888888888899999888863211111 11222 2378889999884 35553 22 21 0
Q ss_pred CCCHHHHHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcC
Q 020848 115 MLEKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 194 (320)
Q Consensus 115 ~l~~e~l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 194 (320)
.-.++.++.++++|+|.+-+. | -.+++..+..+.+++.|++. -+++...-+.+.+..+.+.
T Consensus 112 ~g~~~f~~~~~~aGvdGvIip-D------------lp~ee~~~~~~~~~~~gl~~--I~lvap~t~~eri~~i~~~---- 172 (271)
T 3nav_A 112 RGIDDFYQRCQKAGVDSVLIA-D------------VPTNESQPFVAAAEKFGIQP--IFIAPPTASDETLRAVAQL---- 172 (271)
T ss_dssp TCHHHHHHHHHHHTCCEEEET-T------------SCGGGCHHHHHHHHHTTCEE--EEEECTTCCHHHHHHHHHH----
T ss_pred HhHHHHHHHHHHCCCCEEEEC-C------------CCHHHHHHHHHHHHHcCCeE--EEEECCCCCHHHHHHHHHH----
Confidence 113778999999999997763 1 12233456677788899873 2233223333333333332
Q ss_pred CCCCCeeeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccChhHHHH-HHHcCCceEeeCCcc
Q 020848 195 PTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQAL-CFLAGANSIFTGEKL 272 (320)
Q Consensus 195 ~~~~~~v~~~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~~~~~~-~~~~Gan~~~~~~~~ 272 (320)
. ...+.......+.|.. ...+ .+....+...|..... ++..| .++....+.. .+..||+.+++|..+
T Consensus 173 ~--~gfiY~vs~~GvTG~~----~~~~-~~~~~~v~~vr~~~~~---Pv~vG-fGIst~e~~~~~~~~gADgvIVGSAi 240 (271)
T 3nav_A 173 G--KGYTYLLSRAGVTGAE----TKAN-MPVHALLERLQQFDAP---PALLG-FGISEPAQVKQAIEAGAAGAISGSAV 240 (271)
T ss_dssp C--CSCEEECCCC------------CC-HHHHHHHHHHHHTTCC---CEEEC-SSCCSHHHHHHHHHTTCSEEEESHHH
T ss_pred C--CCeEEEEeccCCCCcc----cCCc-hhHHHHHHHHHHhcCC---CEEEE-CCCCCHHHHHHHHHcCCCEEEECHHH
Confidence 2 1223222222222322 1122 3345556666655432 22212 2333333344 788999999999644
No 112
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=84.55 E-value=6 Score=32.96 Aligned_cols=76 Identities=12% Similarity=0.169 Sum_probs=47.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
++.|++.+..+.+.+.|++-|.-++|. .++| ..++++.-+-+.+ ...+.+-.+.|..+.+.+..+.++|.+++..|
T Consensus 154 Lt~eei~~a~~ia~~aGADfVKTSTGf-~~gg--At~~dv~lmr~~v-g~~v~VKasGGIrt~~da~~~i~aGA~riGtS 229 (239)
T 3ngj_A 154 LTNEEKVEVCKRCVAAGAEYVKTSTGF-GTHG--ATPEDVKLMKDTV-GDKALVKAAGGIRTFDDAMKMINNGASRIGAS 229 (239)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEECCCSS-SSCC--CCHHHHHHHHHHH-GGGSEEEEESSCCSHHHHHHHHHTTEEEEEES
T ss_pred CCHHHHHHHHHHHHHHCcCEEECCCCC-CCCC--CCHHHHHHHHHhh-CCCceEEEeCCCCCHHHHHHHHHhcccceecc
Confidence 677888877777777888777665442 2222 2334333322222 22455667777778888888888888876654
No 113
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=84.21 E-value=5.7 Score=33.25 Aligned_cols=120 Identities=13% Similarity=0.103 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHHcCCCEEEEeccc----CCCCCCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeec
Q 020848 58 KDAVMQAAQKAKEAGSTRFCMGAAW----RDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYN 133 (320)
Q Consensus 58 ~eei~~~~~~~~~~g~~~i~l~~g~----~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~ 133 (320)
.+++++.+... .-..++|+--. +.-+|=....+.+.+.++.+++.|++++.-.. -+.++++.-++.|.++|-
T Consensus 75 t~emi~ial~~---kP~~vtLVPEkreE~TTegGldv~~~~L~~~i~~L~~~GIrVSLFID-pd~~qi~aA~~~GAd~IE 150 (260)
T 3o6c_A 75 NDEILNLALKL---KPHRVTLVPEKREELTTEGGLCLNHAKLKQSIEKLQNANIEVSLFIN-PSLEDIEKSKILKAQFIE 150 (260)
T ss_dssp CHHHHHHHHHH---CCSEEEECCCSGGGBCTTSSBCTTCTTHHHHHHHHHHTTCEEEEEEC-SCHHHHHHHHHTTCSEEE
T ss_pred CHHHHHHHHHc---CCCEEEECCCCCCccCCCCChhhCHHHHHHHHHHHHHCCCEEEEEeC-CCHHHHHHHHHhCCCEEE
Confidence 35666665543 34578886110 01111112567788999999999998654332 468899999999999998
Q ss_pred cCccccHHHHh----hhCC-------------------CCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHH
Q 020848 134 HNLDTSREFYS----KIIT-------------------TRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRV 185 (320)
Q Consensus 134 i~let~~~~~~----~i~~-------------------~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~ 185 (320)
+.-..+.+.+. .+.+ ...++.+.++.+.+++.|+.+. .|+|-+.+.+.
T Consensus 151 LhTG~YA~a~~~~~sn~~~~~~~~~~l~~~~~~~~~~~~~el~~l~~aA~~A~~lGL~Vn----AGHGL~y~Nv~ 221 (260)
T 3o6c_A 151 LHTGHYANLHNALFSNISHTAFALKELDQDKKTLQAQFEKELQNLELCAKKGLELGLKVA----AGHGLNYKNVK 221 (260)
T ss_dssp ECCHHHHHHHHHHHSSGGGSTTCCGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEE----ECTTCCTTTTH
T ss_pred EechHhhhhhhccccccccccccccccccccchhhHHHHHHHHHHHHHHHHHHHcCCEEe----cCCCCCHHHHH
Confidence 86655522222 1111 1123444555566667776654 45766655544
No 114
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=84.16 E-value=7 Score=31.30 Aligned_cols=93 Identities=24% Similarity=0.330 Sum_probs=53.9
Q ss_pred CHHHHHHHH-HHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCce-EEEe-------CC--CCCHHHHHHHH
Q 020848 57 TKDAVMQAA-QKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGME-VCCT-------LG--MLEKHQAIELK 125 (320)
Q Consensus 57 s~eei~~~~-~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~-i~~~-------~g--~l~~e~l~~L~ 125 (320)
+.|+.++.+ +.+.+.|++.|++-+. .|+ .-..+.+ .++ ++. +.++ +| .++++..+.|.
T Consensus 27 NT~~tl~la~era~e~~Ik~iVVAS~----sG~--TA~k~~e---~~~--~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~ 95 (201)
T 1vp8_A 27 NTEETLRLAVERAKELGIKHLVVASS----YGD--TAMKALE---MAE--GLEVVVVTYHTGFVREGENTMPPEVEEELR 95 (201)
T ss_dssp GHHHHHHHHHHHHHHHTCCEEEEECS----SSH--HHHHHHH---HCT--TCEEEEEECCTTSSSTTCCSSCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHcCCCEEEEEeC----CCh--HHHHHHH---Hhc--CCeEEEEeCcCCCCCCCCCcCCHHHHHHHH
Confidence 455555555 5677789999998643 242 1222333 222 344 3333 33 27899999999
Q ss_pred HhccCeeccC--cccc-HHHHhhhCCCCCHHHHHHHHH
Q 020848 126 KAGLTAYNHN--LDTS-REFYSKIITTRSYDERLETLK 160 (320)
Q Consensus 126 ~aGld~v~i~--let~-~~~~~~i~~~~~~~~~l~~i~ 160 (320)
+.|+..+..+ +.+. +.+.++..+-...+-.-++++
T Consensus 96 ~~G~~V~t~tH~lsgveR~is~kfGG~~p~eiiA~tLR 133 (201)
T 1vp8_A 96 KRGAKIVRQSHILSGLERSISRKLGGVSRTEAIAEALR 133 (201)
T ss_dssp HTTCEEEECCCTTTTTHHHHHHHTCCCCHHHHHHHHHH
T ss_pred hCCCEEEEEeccccchhHHHHHhcCCCCHHHHHHHHHH
Confidence 9999877643 5666 444444433334444445555
No 115
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=84.00 E-value=19 Score=31.72 Aligned_cols=79 Identities=16% Similarity=0.192 Sum_probs=51.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEec-ccCC----CCCC-chhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhcc
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGA-AWRD----TIGR-KTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGL 129 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~-g~~~----~~ge-~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGl 129 (320)
-+++++.+.++...+.|...+.+.. |+.. ..+. ....+.+.++++.+++.|+.+.++.. ..+.++...++|+
T Consensus 164 ~~~~~~~~~~~~~~~~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~--~~~~i~~~~~~g~ 241 (403)
T 3gnh_A 164 DSPDEARKAVRTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMAGIKVAAHAH--GASGIREAVRAGV 241 (403)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHTTCEEEEEEC--SHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeecCCcCCCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEeC--CHHHHHHHHHhCC
Confidence 5789999999998888988776632 1110 0111 13457788888888888887655532 2345666677777
Q ss_pred CeeccCc
Q 020848 130 TAYNHNL 136 (320)
Q Consensus 130 d~v~i~l 136 (320)
+.+.+..
T Consensus 242 ~~i~H~~ 248 (403)
T 3gnh_A 242 DTIEHAS 248 (403)
T ss_dssp SEEEECT
T ss_pred CEEecCC
Confidence 7666544
No 116
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=83.70 E-value=9.3 Score=33.60 Aligned_cols=36 Identities=17% Similarity=0.217 Sum_probs=20.4
Q ss_pred hHHHHHHHHHHhhhcCce---EEEeCCCCCHHHHHHHHH
Q 020848 91 NFNQILEYVKDIRDMGME---VCCTLGMLEKHQAIELKK 126 (320)
Q Consensus 91 ~~~~l~~~i~~~k~~~~~---i~~~~g~l~~e~l~~L~~ 126 (320)
..+++.++++.+.+.|.. +.-|.|.++++.+.+|.+
T Consensus 167 ~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~ 205 (337)
T 3ble_A 167 SPDYVKSLVEHLSKEHIERIFLPDTLGVLSPEETFQGVD 205 (337)
T ss_dssp CHHHHHHHHHHHHTSCCSEEEEECTTCCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCcCHHHHHHHHH
Confidence 345666666666665543 233566666666555543
No 117
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=83.29 E-value=9.8 Score=31.50 Aligned_cols=76 Identities=14% Similarity=0.193 Sum_probs=49.9
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
+.|++.+..+.+.+.|.+-|.-.+|..++.| ...+++.-+-+.+. ..+.+-.+.|..+.+.+..+.++|.+++..|
T Consensus 144 t~eei~~a~~ia~~aGADfVKTSTGf~~~~g--At~edv~lm~~~v~-~~v~VKaaGGIrt~~~a~~~i~aGa~RiGtS 219 (231)
T 3ndo_A 144 GEPLLADVCRVARDAGADFVKTSTGFHPSGG--ASVQAVEIMARTVG-ERLGVKASGGIRTAEQAAAMLDAGATRLGLS 219 (231)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECCCSCCTTCS--CCHHHHHHHHHHHT-TTSEEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred CHHHHHHHHHHHHHHCcCEEEcCCCCCCCCC--CCHHHHHHHHHHhC-CCceEEEeCCCCCHHHHHHHHHhcchhcccc
Confidence 7888888888888888887776555321233 23333333322222 2456667778888888888889999877654
No 118
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=83.27 E-value=6.7 Score=35.32 Aligned_cols=42 Identities=12% Similarity=0.142 Sum_probs=27.7
Q ss_pred CCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 150 RSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
......++....|...|+.+.++.+ + +.=-+...+.++..++
T Consensus 276 GGit~~~~ia~~A~~~gi~~~~h~~-~---~~i~~aa~~hlaaa~p 317 (393)
T 4dwd_A 276 GGITGMMQCAALAHAHGVEFVPHQT-Q---PGVGHFANIHVLSTLM 317 (393)
T ss_dssp THHHHHHHHHHHHHHHTCEECCCCC-C---SSHHHHHHHHHHHTCT
T ss_pred CCHHHHHHHHHHHHHcCCEEeecCC-C---cHHHHHHHHHHHHhCC
Confidence 3577788888999999998877765 3 2223455555555553
No 119
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=83.01 E-value=8 Score=34.40 Aligned_cols=25 Identities=12% Similarity=0.153 Sum_probs=19.9
Q ss_pred CCHHHHHHHHHHHHHcCCeeeeeEE
Q 020848 150 RSYDERLETLKHVREAGINVCSGGI 174 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~v~~~~i 174 (320)
......++..+.+++.|+.+.++.+
T Consensus 277 GGi~~~~~i~~~A~~~gi~~~~h~~ 301 (371)
T 2ovl_A 277 GGYTTFRKVAALAEANNMLLTSHGV 301 (371)
T ss_dssp TSHHHHHHHHHHHHHTTCCEEECSC
T ss_pred CCHHHHHHHHHHHHHcCCeEccccH
Confidence 4688888999999999998766543
No 120
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=82.96 E-value=26 Score=31.40 Aligned_cols=205 Identities=12% Similarity=0.113 Sum_probs=112.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCCCCC---CchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeec
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIG---RKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYN 133 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l~~g~~~~~g---e~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~ 133 (320)
+.|.+++.++.+++.|++-+.++.-.+.+.. ..+..+.+..+.+..++.|+++.++. ++.+.++.+.+. +|.+.
T Consensus 154 s~e~a~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~Gl~~~te~--~d~~~~~~l~~~-vd~lk 230 (385)
T 3nvt_A 154 SYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYGLGVISEI--VTPADIEVALDY-VDVIQ 230 (385)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEEEC--CSGGGHHHHTTT-CSEEE
T ss_pred CHHHHHHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHcCCEEEEec--CCHHHHHHHHhh-CCEEE
Confidence 7899999999999999987777642111100 01234555444444447899976654 677788888777 88888
Q ss_pred cCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeeee--eeecCC
Q 020848 134 HNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINA--LLAVKG 211 (320)
Q Consensus 134 i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~--~~p~~g 211 (320)
|+--.. .++ .-++.+.+.|.+|. +=-|..-+.+|+...++.+..-| ...+.+.. ..-.|.
T Consensus 231 Igs~~~----------~n~----~LL~~~a~~gkPVi--lk~G~~~t~~e~~~Ave~i~~~G--n~~i~L~~rG~s~yp~ 292 (385)
T 3nvt_A 231 IGARNM----------QNF----ELLKAAGRVDKPIL--LKRGLSATIEEFIGAAEYIMSQG--NGKIILCERGIRTYEK 292 (385)
T ss_dssp ECGGGT----------TCH----HHHHHHHTSSSCEE--EECCTTCCHHHHHHHHHHHHTTT--CCCEEEEECCBCCSCC
T ss_pred ECcccc----------cCH----HHHHHHHccCCcEE--EecCCCCCHHHHHHHHHHHHHcC--CCeEEEEECCCCCCCC
Confidence 863111 122 44555666666542 22233459999999999999887 33344432 122222
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhCCCce-eec--CCcccccChhHHHHHHHcCCceEeeCCcccc----CCC---CChh
Q 020848 212 TPLQDQKPVEIWEMIRMIATARIVMPKAM-VRL--SAGRVRFSMPEQALCFLAGANSIFTGEKLLT----TPN---NDFD 281 (320)
Q Consensus 212 t~~~~~~~~~~~e~~~~~a~~R~~~p~~~-i~~--~~g~~~~~~~~~~~~~~~Gan~~~~~~~~~~----~~~---~~~~ 281 (320)
.+... ++ ++.+..++..+.-+. .-. +.|...+.+.....++..||+.++....+-. +++ .+++
T Consensus 293 ~~~~~---ld----l~~i~~lk~~~~lpV~~D~th~~G~r~~v~~~a~AAvA~GA~gl~iE~H~~pd~a~~D~~~sl~p~ 365 (385)
T 3nvt_A 293 ATRNT---LD----ISAVPILKKETHLPVMVDVTHSTGRKDLLLPCAKAALAIEADGVMAEVHPDPAVALSDSAQQMDIP 365 (385)
T ss_dssp SSSSB---CC----TTHHHHHHHHBSSCEEEEHHHHHCCGGGHHHHHHHHHHTTCSEEEEEBCSCGGGCSSCTTTSBCHH
T ss_pred CCccc---cC----HHHHHHHHHhcCCCEEEcCCCCCCccchHHHHHHHHHHhCCCEEEEEecCChhhcCCcccccCCHH
Confidence 12211 11 222333444322111 111 1222233334456688899998876532211 232 3566
Q ss_pred HHHHHHHH
Q 020848 282 ADQLMFKV 289 (320)
Q Consensus 282 ~~~~~i~~ 289 (320)
+..+|+++
T Consensus 366 el~~lv~~ 373 (385)
T 3nvt_A 366 EFEEFWNA 373 (385)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66666654
No 121
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=82.84 E-value=5.8 Score=34.39 Aligned_cols=30 Identities=13% Similarity=-0.025 Sum_probs=19.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCC
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDT 85 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~ 85 (320)
.+.+++...+..+.+.|++.|+...|+.+.
T Consensus 94 ~~~~~l~~~L~~~~~~GI~nILaLrGDpp~ 123 (304)
T 3fst_A 94 ATPDELRTIARDYWNNGIRHIVALRGDLPP 123 (304)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEECCCCC-
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCCCCC
Confidence 466677777766667777777666555443
No 122
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=82.74 E-value=9 Score=31.51 Aligned_cols=76 Identities=16% Similarity=0.234 Sum_probs=48.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
++.+++.+.++.+.+.|++.+...+|. .++| ...+.+..+.+.+ ...+++..+.|..+.+.+.++.++|.+++..+
T Consensus 129 l~~~~~~~~a~~a~eaGad~I~tstg~-~~gg--a~~~~i~~v~~~v-~~~ipVia~GGI~t~~da~~~l~aGA~~iG~s 204 (225)
T 1mzh_A 129 LNEEEIKKAVEICIEAGADFIKTSTGF-APRG--TTLEEVRLIKSSA-KGRIKVKASGGIRDLETAISMIEAGADRIGTS 204 (225)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECCCSC-SSSC--CCHHHHHHHHHHH-TTSSEEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred CCHHHHHHHHHHHHHhCCCEEEECCCC-CCCC--CCHHHHHHHHHHh-CCCCcEEEECCCCCHHHHHHHHHhCchHHHHc
Confidence 677888888888888898888544331 1222 2223222222222 12577888888888888888888999866554
No 123
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=82.66 E-value=7.8 Score=32.49 Aligned_cols=68 Identities=15% Similarity=0.110 Sum_probs=46.0
Q ss_pred HHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhh-cCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 64 AAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 64 ~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~-~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
.++.+.+.|+..|++.+....-...... +++++.+++ .++++....|..+.+.+.++.++|++.+.++
T Consensus 161 ~~~~~~~~G~~~i~~t~~~~~g~~~g~~----~~~i~~l~~~~~ipvia~GGI~~~ed~~~~~~~Gadgv~vg 229 (266)
T 2w6r_A 161 WVVEVEKRGAGEILLTSIDRDGTKSGYD----TEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAA 229 (266)
T ss_dssp HHHHHHHTTCSEEEEEETTTTTTCSCCC----HHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHHHHHcCCCEEEEEeecCCCCcCCCC----HHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHcCCHHHHcc
Confidence 3444556899998885422110000112 456666663 4788888999999999999999999998886
No 124
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=82.20 E-value=21 Score=29.94 Aligned_cols=163 Identities=13% Similarity=0.194 Sum_probs=89.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhh-c-CceEEEeC------CC--CCHHHHHH-H
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-M-GMEVCCTL------GM--LEKHQAIE-L 124 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~-~-~~~i~~~~------g~--l~~e~l~~-L 124 (320)
.+.+++++.++.+...|++-+-+=- +...+....+++.+.+..+++ . ++++..|. |. .+++.+.. +
T Consensus 29 ~t~~e~l~~a~~~~~~~aD~vElR~---D~l~~~~~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~EGG~~~~~~~~~~~ll 105 (258)
T 4h3d_A 29 KNKKDIIKEAKELKDACLDIIEWRV---DFFENVENIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGEKLISRDYYTTLN 105 (258)
T ss_dssp SSHHHHHHHHHHHTTSSCSEEEEEG---GGCTTTTCHHHHHHHHHHHHHHCTTSCEEEECCCGGGTCSCCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCCCEEEEee---ccccccCCHHHHHHHHHHHHHhcCCCCEEEEEechhhCCCCCCCHHHHHHHH
Confidence 4789999999998888888776621 111223356788888888874 2 56765553 32 45544333 3
Q ss_pred H---Hhc-cCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEE-EEeCCCHHHHHHHHHHHhcCCCCCC
Q 020848 125 K---KAG-LTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGI-IGLGEAEEDRVGLLHTLATLPTHPE 199 (320)
Q Consensus 125 ~---~aG-ld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i-~Glget~ed~~~~l~~l~~l~~~~~ 199 (320)
+ +.| +|.|-+-+...++. +-+.++.+++.|.++-...= +--..+.+++.+.+..+.++| ++
T Consensus 106 ~~~~~~~~~d~iDvEl~~~~~~------------~~~l~~~a~~~~~kiI~S~Hdf~~TP~~~el~~~~~~~~~~g--aD 171 (258)
T 4h3d_A 106 KEISNTGLVDLIDVELFMGDEV------------IDEVVNFAHKKEVKVIISNHDFNKTPKKEEIVSRLCRMQELG--AD 171 (258)
T ss_dssp HHHHHTTCCSEEEEEGGGCHHH------------HHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTT--CS
T ss_pred HHHHhcCCchhhHHhhhccHHH------------HHHHHHHHHhCCCEEEEEEecCCCCCCHHHHHHHHHHHHHhC--CC
Confidence 3 334 56665544332222 22334556777766422211 101235578888888888887 55
Q ss_pred eeeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCC-ceeecC
Q 020848 200 SVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPK-AMVRLS 244 (320)
Q Consensus 200 ~v~~~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~-~~i~~~ 244 (320)
.+.+-. +| .+ .-+...+++....++...++ +.+-++
T Consensus 172 IvKia~-~~--~~------~~D~l~Ll~~~~~~~~~~~~~P~I~~~ 208 (258)
T 4h3d_A 172 LPKIAV-MP--QN------EKDVLVLLEATNEMFKIYADRPIITMS 208 (258)
T ss_dssp EEEEEE-CC--SS------HHHHHHHHHHHHHHHHHTCSSCBEEEE
T ss_pred EEEEEE-cc--CC------HHHHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 454422 22 22 12344566666655555443 445444
No 125
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=82.17 E-value=9.4 Score=34.62 Aligned_cols=80 Identities=10% Similarity=0.133 Sum_probs=59.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCC----------CCC--CchhHHHHHHHHHHhhh-c--CceEEEeCCCCCHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRD----------TIG--RKTNFNQILEYVKDIRD-M--GMEVCCTLGMLEKHQ 120 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~----------~~g--e~~~~~~l~~~i~~~k~-~--~~~i~~~~g~l~~e~ 120 (320)
++.+++.+.++.+.+.|++.|.+...+.. .+| .+...+.-+++++.+++ . .+++..+.|..+.+.
T Consensus 280 ~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eD 359 (415)
T 3i65_A 280 LNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLD 359 (415)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCCHHH
Confidence 56778999999999999999988642211 111 12345666777777773 4 588888999999999
Q ss_pred HHHHHHhccCeeccC
Q 020848 121 AIELKKAGLTAYNHN 135 (320)
Q Consensus 121 l~~L~~aGld~v~i~ 135 (320)
+.+...+|.|.|.++
T Consensus 360 a~e~l~aGAd~VqIg 374 (415)
T 3i65_A 360 ALEKIEAGASVCQLY 374 (415)
T ss_dssp HHHHHHHTEEEEEES
T ss_pred HHHHHHcCCCEEEEc
Confidence 888888999998886
No 126
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=82.14 E-value=4 Score=36.39 Aligned_cols=76 Identities=14% Similarity=0.163 Sum_probs=52.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCC-----CCCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHhc-
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDT-----IGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAG- 128 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~-----~ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~aG- 128 (320)
.+.++..+.++.+.+.|+..+.+.++.... .+ +.. ..++++.+| ..++++..+.|..+.+.++++.+.|
T Consensus 243 ~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~-~~~---~~~~~~~ir~~~~iPVi~~GgI~s~e~a~~~l~~G~ 318 (363)
T 3l5l_A 243 QTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWG-PAF---MGPIAERVRREAKLPVTSAWGFGTPQLAEAALQANQ 318 (363)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCC-TTT---THHHHHHHHHHHTCCEEECSSTTSHHHHHHHHHTTS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCC-cch---hHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHCCC
Confidence 356788888888888999988887643211 11 111 234555555 3467777777777899999998888
Q ss_pred cCeeccC
Q 020848 129 LTAYNHN 135 (320)
Q Consensus 129 ld~v~i~ 135 (320)
+|.|.++
T Consensus 319 aD~V~iG 325 (363)
T 3l5l_A 319 LDLVSVG 325 (363)
T ss_dssp CSEEECC
T ss_pred ccEEEec
Confidence 8988886
No 127
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=82.10 E-value=6.2 Score=34.92 Aligned_cols=78 Identities=15% Similarity=0.109 Sum_probs=53.1
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCC--CCCCc--hhHHHHHHHHHHhh-hc-CceEEEeCCCCCHHHHHHHHHhccC
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCMGAAWRD--TIGRK--TNFNQILEYVKDIR-DM-GMEVCCTLGMLEKHQAIELKKAGLT 130 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l~~g~~~--~~ge~--~~~~~l~~~i~~~k-~~-~~~i~~~~g~l~~e~l~~L~~aGld 130 (320)
+.++..+.++.+.+.|++.|.+.++... ..|.. .....-+++++.++ .. ++++..+.|..+.+.+.++.+ |+|
T Consensus 142 ~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~-GaD 220 (350)
T 3b0p_A 142 TYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK-RVD 220 (350)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHT-TSS
T ss_pred cHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHh-CCC
Confidence 4567888888888999999998764321 01100 00001245566666 34 788889989889999888887 999
Q ss_pred eeccC
Q 020848 131 AYNHN 135 (320)
Q Consensus 131 ~v~i~ 135 (320)
.|.++
T Consensus 221 ~V~iG 225 (350)
T 3b0p_A 221 GVMLG 225 (350)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99886
No 128
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=82.01 E-value=10 Score=33.87 Aligned_cols=43 Identities=12% Similarity=0.051 Sum_probs=28.4
Q ss_pred CCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 150 RSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
..+...++....|...|+.+.++.++ ++.=-+...+.++..++
T Consensus 280 GGit~~~~ia~~A~~~gi~~~~~~~~---es~i~~aa~~hlaaa~p 322 (383)
T 3i4k_A 280 GGLLESKKIAAIAEAGGLACHGATSL---EGPIGTAASLQFAASTK 322 (383)
T ss_dssp TSHHHHHHHHHHHHHTTCEEEECCSC---CCHHHHHHHHHHHHHCT
T ss_pred CCHHHHHHHHHHHHHcCCeEEeCCCC---ccHHHHHHHHHHHHcCC
Confidence 46788888888999999887544433 45444555565555553
No 129
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=82.00 E-value=8.8 Score=34.44 Aligned_cols=25 Identities=12% Similarity=0.098 Sum_probs=19.6
Q ss_pred CCHHHHHHHHHHHHHcCCeeeeeEE
Q 020848 150 RSYDERLETLKHVREAGINVCSGGI 174 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~v~~~~i 174 (320)
..+...++.++.|++.|+.+.++.+
T Consensus 280 GGit~~~~i~~~A~~~gi~~~~~~~ 304 (391)
T 2qgy_A 280 GGLIDIIEISNEASNNGIFISPHCW 304 (391)
T ss_dssp SCHHHHHHHHHHHHHTTCEECCBCC
T ss_pred CCHHHHHHHHHHHHHCCCEEeccCC
Confidence 3678888888999999988766644
No 130
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=81.91 E-value=4 Score=35.57 Aligned_cols=68 Identities=6% Similarity=0.027 Sum_probs=48.1
Q ss_pred HHHHHHHHcCCCEEEEecccCCCC-CCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHH-hccCeeccC
Q 020848 63 QAAQKAKEAGSTRFCMGAAWRDTI-GRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKK-AGLTAYNHN 135 (320)
Q Consensus 63 ~~~~~~~~~g~~~i~l~~g~~~~~-ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~-aGld~v~i~ 135 (320)
+.++.+.+.|++.|.+.++..... ..+..+ +.++.+++ ++++..+.|..+.+.+.++.+ .|+|.|.++
T Consensus 144 ~~a~~l~~~G~d~i~v~g~~~~~~~~~~~~~----~~i~~i~~-~ipVi~~GgI~s~~da~~~l~~~gad~V~iG 213 (318)
T 1vhn_A 144 EIYRILVEEGVDEVFIHTRTVVQSFTGRAEW----KALSVLEK-RIPTFVSGDIFTPEDAKRALEESGCDGLLVA 213 (318)
T ss_dssp HHHHHHHHTTCCEEEEESSCTTTTTSSCCCG----GGGGGSCC-SSCEEEESSCCSHHHHHHHHHHHCCSEEEES
T ss_pred HHHHHHHHhCCCEEEEcCCCccccCCCCcCH----HHHHHHHc-CCeEEEECCcCCHHHHHHHHHcCCCCEEEEC
Confidence 666777788999998876543221 112222 45566666 788888888888888887777 799999987
No 131
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=81.53 E-value=11 Score=31.79 Aligned_cols=76 Identities=14% Similarity=0.106 Sum_probs=50.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
++.+++.+.++.+.+.|.+-|.-.+|. .+.| ...+++.-+-+.+. ..+.+-.+.|..+.+.+..+.++|.+++..|
T Consensus 170 Lt~eei~~A~~ia~eaGADfVKTSTGf-~~~G--AT~edV~lm~~~vg-~~v~VKaAGGIrt~~~al~mi~aGA~RiGtS 245 (260)
T 3r12_A 170 LDTEEKIAACVISKLAGAHFVKTSTGF-GTGG--ATAEDVHLMKWIVG-DEMGVKASGGIRTFEDAVKMIMYGADRIGTS 245 (260)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEECCCSS-SSCC--CCHHHHHHHHHHHC-TTSEEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred CCHHHHHHHHHHHHHhCcCEEEcCCCC-CCCC--CCHHHHHHHHHHhC-CCceEEEeCCCCCHHHHHHHHHcCCceeecc
Confidence 688888888888888888877765543 2223 23333333222222 2466677788888889999999999987654
No 132
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=81.30 E-value=7.7 Score=33.19 Aligned_cols=115 Identities=17% Similarity=0.061 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeCCC----CCHHHHHHHHHhccCeec
Q 020848 58 KDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGM----LEKHQAIELKKAGLTAYN 133 (320)
Q Consensus 58 ~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~----l~~e~l~~L~~aGld~v~ 133 (320)
.+.+.+.++.+++.|++.|+|+-=. ..| ....+.+.++++..+. +.+..+... -..+.++.|.++|+++|.
T Consensus 110 ~~~M~~dI~~~~~~GAdGvVfG~L~--~dg-~iD~~~~~~Li~~a~~--l~vTFHRAFD~~~d~~~Ale~Li~lGvdrIL 184 (287)
T 3iwp_A 110 IEVMKADIRLAKLYGADGLVFGALT--EDG-HIDKELCMSLMAICRP--LPVTFHRAFDMVHDPMAALETLLTLGFERVL 184 (287)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCBC--TTS-CBCHHHHHHHHHHHTT--SCEEECGGGGGCSCHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeeeC--CCC-CcCHHHHHHHHHHcCC--CcEEEECchhccCCHHHHHHHHHHcCCCEEE
Confidence 3455566677788999999986311 112 2456777777777664 444444331 246789999999999988
Q ss_pred cCccccHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeeeEEEEeCCCHHHHHHHHHH
Q 020848 134 HNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGGIIGLGEAEEDRVGLLHT 190 (320)
Q Consensus 134 i~let~~~~~~~i~~~~~~~~~l~~i~~a~~-~Gi~v~~~~i~Glget~ed~~~~l~~ 190 (320)
.+=... +..+-++.++.+.+ ++- .+.++.|=|-+.+.+.++++.
T Consensus 185 TSG~~~-----------~a~~Gl~~Lk~Lv~~a~~--rI~ImaGGGV~~~Ni~~l~~~ 229 (287)
T 3iwp_A 185 TSGCDS-----------SALEGLPLIKRLIEQAKG--RIVVMPGGGITDRNLQRILEG 229 (287)
T ss_dssp ECTTSS-----------STTTTHHHHHHHHHHHTT--SSEEEECTTCCTTTHHHHHHH
T ss_pred CCCCCC-----------ChHHhHHHHHHHHHHhCC--CCEEEECCCcCHHHHHHHHHh
Confidence 752110 11111333344333 232 345677777777666666643
No 133
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=81.24 E-value=23 Score=29.76 Aligned_cols=178 Identities=17% Similarity=0.167 Sum_probs=106.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEe----CCCCC----HHHHHHHHHh
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCT----LGMLE----KHQAIELKKA 127 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~----~g~l~----~e~l~~L~~a 127 (320)
.+.++|.+.++.+.+.|+..+|+. |.+.+...+.+ +..++.+.+- .|..+ ..+.+.-.+.
T Consensus 56 ~t~~~I~~lc~eA~~~~~aaVCV~---------p~~V~~a~~~L---~gs~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~ 123 (260)
T 3r12_A 56 ATPDDIKKLCLEARENRFHGVCVN---------PCYVKLAREEL---EGTDVKVVTVVGFPLGANETRTKAHEAIFAVES 123 (260)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEC---------GGGHHHHHHHH---TTSCCEEEEEESTTTCCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCcEEEEC---------HHHHHHHHHHh---cCCCCeEEEEecCCCCCCcHHHHHHHHHHHHHc
Confidence 688999999999999999999984 44555444433 4445665432 23322 2234455666
Q ss_pred ccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeC-CCHHHHHHHHHHHhcCCCCCCeeeeeee
Q 020848 128 GLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLG-EAEEDRVGLLHTLATLPTHPESVPINAL 206 (320)
Q Consensus 128 Gld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glg-et~ed~~~~l~~l~~l~~~~~~v~~~~~ 206 (320)
|.|.|.+-+.-. .+ ...+|+.+.+-|+..+++--...+-+|+-.+ -+++++....+.+.+.| .+.|.-.
T Consensus 124 GAdEIDmViNig-----~l-k~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia~eaG--ADfVKTS-- 193 (260)
T 3r12_A 124 GADEIDMVINVG-----ML-KAKEWEYVYEDIRSVVESVKGKVVKVIIETCYLDTEEKIAACVISKLAG--AHFVKTS-- 193 (260)
T ss_dssp TCSEEEEECCHH-----HH-HTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHTT--CSEEECC--
T ss_pred CCCEEEEEeehh-----hh-ccccHHHHHHHHHHHHHhcCCCcEEEEEeCCCCCHHHHHHHHHHHHHhC--cCEEEcC--
Confidence 998887655332 11 1357888877777777651122334455442 47888999999999998 6666553
Q ss_pred eecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccChhHHHHHHHcCCceE
Q 020848 207 LAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSI 266 (320)
Q Consensus 207 ~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~~~~~~~~~~Gan~~ 266 (320)
|-+.. ...+.++...+... .-+...+..++|--.. ......+.+||+++
T Consensus 194 -----TGf~~-~GAT~edV~lm~~~---vg~~v~VKaAGGIrt~--~~al~mi~aGA~Ri 242 (260)
T 3r12_A 194 -----TGFGT-GGATAEDVHLMKWI---VGDEMGVKASGGIRTF--EDAVKMIMYGADRI 242 (260)
T ss_dssp -----CSSSS-CCCCHHHHHHHHHH---HCTTSEEEEESSCCSH--HHHHHHHHTTCSEE
T ss_pred -----CCCCC-CCCCHHHHHHHHHH---hCCCceEEEeCCCCCH--HHHHHHHHcCCcee
Confidence 22221 23455553333332 2345566666653322 33455688999987
No 134
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=81.17 E-value=6.7 Score=34.36 Aligned_cols=22 Identities=14% Similarity=0.194 Sum_probs=10.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEE
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCM 78 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l 78 (320)
+++.+++.++.+.+.|+..|.|
T Consensus 149 ~~~~~~~~~~~~~~~G~~~i~l 170 (325)
T 3eeg_A 149 DQAFLARMVEAVIEAGADVVNI 170 (325)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEC
T ss_pred hHHHHHHHHHHHHhcCCCEEEe
Confidence 4444444444444445544444
No 135
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=80.80 E-value=14 Score=31.65 Aligned_cols=76 Identities=12% Similarity=0.239 Sum_probs=52.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHh-hh--cCceEEEeCCCCCHHHHHHHHHhccCee
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDI-RD--MGMEVCCTLGMLEKHQAIELKKAGLTAY 132 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~-k~--~~~~i~~~~g~l~~e~l~~L~~aGld~v 132 (320)
++.|++.+.++.+.+.|++-|.-.+|.. +.| ...+++ ++++.+ +. ..+.+-...|..+.+.+..+.++|.+++
T Consensus 185 Lt~eei~~A~~ia~eaGADfVKTSTGf~-~~G--AT~edv-~lmr~~v~~~g~~v~VKAAGGIrt~edAl~mi~aGA~Ri 260 (288)
T 3oa3_A 185 LTADEIIAGCVLSSLAGADYVKTSTGFN-GPG--ASIENV-SLMSAVCDSLQSETRVKASGGIRTIEDCVKMVRAGAERL 260 (288)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEECCCSSS-SCC--CCHHHH-HHHHHHHHHSSSCCEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEcCCCCC-CCC--CCHHHH-HHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCcee
Confidence 7888988888888889998876655432 222 234443 333333 22 3466778888889999999999999987
Q ss_pred ccC
Q 020848 133 NHN 135 (320)
Q Consensus 133 ~i~ 135 (320)
..|
T Consensus 261 GtS 263 (288)
T 3oa3_A 261 GAS 263 (288)
T ss_dssp EES
T ss_pred ehh
Confidence 654
No 136
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=80.80 E-value=23 Score=29.30 Aligned_cols=175 Identities=17% Similarity=0.144 Sum_probs=103.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEe----CCCCC----HHHHHHHHHh
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCT----LGMLE----KHQAIELKKA 127 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~----~g~l~----~e~l~~L~~a 127 (320)
.+.++|.+.++++.+.|+..+|+. |.+.+... .++..++.+.+- .|..+ ..+.+.-.+.
T Consensus 26 ~t~~~i~~lc~eA~~~~~~aVcV~---------p~~v~~a~----~l~~~~v~v~tVigFP~G~~~~~~K~~E~~~Ai~~ 92 (231)
T 3ndo_A 26 ATPSDVTALVDEAADLGVFAVCVS---------PPLVSVAA----GVAPSGLAIAAVAGFPSGKHVPGIKATEAELAVAA 92 (231)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEC---------GGGHHHHH----HHCCTTCEEEEEESTTTCCSCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHhCCcEEEEC---------HHHHHHHH----HhcCCCCeEEEEecCCCCCCcHHHHHHHHHHHHHc
Confidence 688999999999999999999884 33444332 334445664433 23322 2234455667
Q ss_pred ccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHc--CCeeeeeEEEEeC-----CCHHHHHHHHHHHhcCCCCCCe
Q 020848 128 GLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREA--GINVCSGGIIGLG-----EAEEDRVGLLHTLATLPTHPES 200 (320)
Q Consensus 128 Gld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~--Gi~v~~~~i~Glg-----et~ed~~~~l~~l~~l~~~~~~ 200 (320)
|.|.|.+-+.-. .+ ...+|+.+.+-|+..++. |..+ -+|+-.+ .+++++....+.+.+.| .+.
T Consensus 93 GAdEIDmVinig-----~l-k~g~~~~v~~ei~~v~~a~~~~~l--KvIiEt~~L~~~~t~eei~~a~~ia~~aG--ADf 162 (231)
T 3ndo_A 93 GATEIDMVIDVG-----AA-LAGDLDAVSADITAVRKAVRAATL--KVIVESAALLEFSGEPLLADVCRVARDAG--ADF 162 (231)
T ss_dssp TCSEEEEECCHH-----HH-HTTCHHHHHHHHHHHHHHTTTSEE--EEECCHHHHHHHTCHHHHHHHHHHHHHTT--CSE
T ss_pred CCCEEEEEeehH-----hh-hcccHHHHHHHHHHHHHHccCCce--EEEEECcccCCCCCHHHHHHHHHHHHHHC--cCE
Confidence 998887655331 11 135788887777777664 3323 3444221 27888999999999998 666
Q ss_pred eeeee-eeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccChhHHHHHHHcCCceE
Q 020848 201 VPINA-LLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSI 266 (320)
Q Consensus 201 v~~~~-~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~~~~~~~~~~Gan~~ 266 (320)
|.-.. |.| ....+.++...+... .-+...+..++|--.. +.....+.+||+++
T Consensus 163 VKTSTGf~~--------~~gAt~edv~lm~~~---v~~~v~VKaaGGIrt~--~~a~~~i~aGa~Ri 216 (231)
T 3ndo_A 163 VKTSTGFHP--------SGGASVQAVEIMART---VGERLGVKASGGIRTA--EQAAAMLDAGATRL 216 (231)
T ss_dssp EECCCSCCT--------TCSCCHHHHHHHHHH---HTTTSEEEEESSCCSH--HHHHHHHHTTCSEE
T ss_pred EEcCCCCCC--------CCCCCHHHHHHHHHH---hCCCceEEEeCCCCCH--HHHHHHHHhcchhc
Confidence 65543 321 123445543333332 2245566666553222 33456678999987
No 137
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=80.71 E-value=14 Score=31.34 Aligned_cols=120 Identities=9% Similarity=-0.054 Sum_probs=76.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeC---------CCCCHHHHHHHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTL---------GMLEKHQAIELKK 126 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~---------g~l~~e~l~~L~~ 126 (320)
+++..+.+.+..+- .-++-+.|++|+.. .++.|.+.++.+++.++.+..-. | .-++.++..++
T Consensus 50 lg~~~~~DlLe~ag-~yID~lKfg~GTs~------l~~~l~ekI~l~~~~gV~v~~GGTlfE~~l~qg-~~~~yl~~~k~ 121 (276)
T 1u83_A 50 YPLQFFKDAIAGAS-DYIDFVKFGWGTSL------LTKDLEEKISTLKEHDITFFFGGTLFEKYVSQK-KVNEFHRYCTY 121 (276)
T ss_dssp CCHHHHHHHHHHHG-GGCCEEEECTTGGG------GCTTHHHHHHHHHHTTCEEEECHHHHHHHHHTT-CHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhh-hhcceEEecCcchh------hhHHHHHHHHHHHHcCCeEeCCcHHHHHHHHcC-cHHHHHHHHHH
Confidence 77777776665433 33788888876432 22338888888888887764321 3 45888999999
Q ss_pred hccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEe-------CCCHHHHHHHHHHHhcCC
Q 020848 127 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL-------GEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 127 aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl-------get~ed~~~~l~~l~~l~ 195 (320)
.|++.|-+|--+. .-+.+++.+.|+.+++. +.+-+.+ |. -.+.+++++.++.-.+.|
T Consensus 122 lGF~~IEISdGti---------~l~~~~~~~lI~~a~~~-f~Vl~Ev--G~K~~~~~~~~~~~~~I~~~~~dLeAG 185 (276)
T 1u83_A 122 FGCEYIEISNGTL---------PMTNKEKAAYIADFSDE-FLVLSEV--GSKDAELASRQSSEEWLEYIVEDMEAG 185 (276)
T ss_dssp TTCSEEEECCSSS---------CCCHHHHHHHHHHHTTT-SEEEEEC--SCCC------CCSTHHHHHHHHHHHHT
T ss_pred cCCCEEEECCCcc---------cCCHHHHHHHHHHHHhh-cEEeeec--cccCccccCCCCHHHHHHHHHHHHHCC
Confidence 9999999874332 23566777777777776 5543322 22 124455666665555555
No 138
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=80.62 E-value=14 Score=30.49 Aligned_cols=87 Identities=10% Similarity=0.058 Sum_probs=50.3
Q ss_pred HHHHHHHHhhhcCce-EEEeCC----CCCHH----HHHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHH
Q 020848 94 QILEYVKDIRDMGME-VCCTLG----MLEKH----QAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE 164 (320)
Q Consensus 94 ~l~~~i~~~k~~~~~-i~~~~g----~l~~e----~l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~ 164 (320)
.+.+.++.+++.|+. +..... ..+++ ..+.++++|+....+.... . .+.+...+.++.+.+
T Consensus 31 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~-~---------~~~~~~~~~i~~A~~ 100 (257)
T 3lmz_A 31 DLDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPIY-M---------KSEEEIDRAFDYAKR 100 (257)
T ss_dssp CHHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEEE-E---------CSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEeccc-c---------CCHHHHHHHHHHHHH
Confidence 456666777777665 433322 23443 3445566677655443211 1 467778888999999
Q ss_pred cCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 165 AGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 165 ~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
.|.+.-.. . .+ .+.+.++.+.+++.|
T Consensus 101 lGa~~v~~-~--p~--~~~l~~l~~~a~~~g 126 (257)
T 3lmz_A 101 VGVKLIVG-V--PN--YELLPYVDKKVKEYD 126 (257)
T ss_dssp HTCSEEEE-E--EC--GGGHHHHHHHHHHHT
T ss_pred hCCCEEEe-c--CC--HHHHHHHHHHHHHcC
Confidence 99873221 1 22 345666777777776
No 139
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=80.16 E-value=23 Score=29.03 Aligned_cols=156 Identities=10% Similarity=0.022 Sum_probs=88.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh-hc-CceEEEeCCCCCHHHHHHHHHhccCeec
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DM-GMEVCCTLGMLEKHQAIELKKAGLTAYN 133 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k-~~-~~~i~~~~g~l~~e~l~~L~~aGld~v~ 133 (320)
.+.++.++.++.+.+.|++-+-+.- .. + .-.+.++.++ +. ++.+-... .++.+.++...++|.|.+.
T Consensus 35 ~~~~~~~~~~~al~~gGv~~iel~~--k~----~----~~~~~i~~l~~~~~~~~igagt-vl~~d~~~~A~~aGAd~v~ 103 (225)
T 1mxs_A 35 AREEDILPLADALAAGGIRTLEVTL--RS----Q----HGLKAIQVLREQRPELCVGAGT-VLDRSMFAAVEAAGAQFVV 103 (225)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEES--SS----T----HHHHHHHHHHHHCTTSEEEEEC-CCSHHHHHHHHHHTCSSEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEec--CC----c----cHHHHHHHHHHhCcccEEeeCe-EeeHHHHHHHHHCCCCEEE
Confidence 4677888889999999999887752 11 2 1233455444 22 33332222 4788999999999999987
Q ss_pred cCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeeeeeeecCCCC
Q 020848 134 HNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTP 213 (320)
Q Consensus 134 i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~~~p~~gt~ 213 (320)
.+... .+.++.+++.|+.. +.|. .|.+++.. +.+.| .+.+.+++
T Consensus 104 ~p~~d-----------------~~v~~~~~~~g~~~----i~G~-~t~~e~~~----A~~~G--ad~vk~FP-------- 147 (225)
T 1mxs_A 104 TPGIT-----------------EDILEAGVDSEIPL----LPGI-STPSEIMM----GYALG--YRRFKLFP-------- 147 (225)
T ss_dssp CSSCC-----------------HHHHHHHHHCSSCE----ECEE-CSHHHHHH----HHTTT--CCEEEETT--------
T ss_pred eCCCC-----------------HHHHHHHHHhCCCE----EEee-CCHHHHHH----HHHCC--CCEEEEcc--------
Confidence 64211 24556666777554 4453 46666544 34666 77787722
Q ss_pred CCCCCCCCHHHH--HHHHHHHHHhCCCceeecCCcccccChhHHHHHHH-cCCceEeeCC
Q 020848 214 LQDQKPVEIWEM--IRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFL-AGANSIFTGE 270 (320)
Q Consensus 214 ~~~~~~~~~~e~--~~~~a~~R~~~p~~~i~~~~g~~~~~~~~~~~~~~-~Gan~~~~~~ 270 (320)
.... ...+...+..+|+..+-..+ ++..+.-...+. +|+..+. +.
T Consensus 148 --------a~~~~G~~~lk~i~~~~~~ipvvaiG---GI~~~N~~~~l~~~Ga~~v~-gS 195 (225)
T 1mxs_A 148 --------AEISGGVAAIKAFGGPFGDIRFCPTG---GVNPANVRNYMALPNVMCVG-TT 195 (225)
T ss_dssp --------HHHHTHHHHHHHHHTTTTTCEEEEBS---SCCTTTHHHHHHSTTBCCEE-EC
T ss_pred --------CccccCHHHHHHHHhhCCCCeEEEEC---CCCHHHHHHHHhccCCEEEE-Ec
Confidence 1111 33444445556543222222 233333344566 5888877 54
No 140
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=80.12 E-value=12 Score=33.52 Aligned_cols=78 Identities=15% Similarity=0.137 Sum_probs=49.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEec-ccCCC-C---CC-chhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhcc
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGA-AWRDT-I---GR-KTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGL 129 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~-g~~~~-~---ge-~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGl 129 (320)
-+.+++.+.++...+.|+..+.+.. |+... . +. ....+.+.++++.+++.|+.+.++.. ..+.++...++|+
T Consensus 172 ~~~~~~~~~v~~~~~~g~~~ik~~~~G~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~--~~~~i~~al~~G~ 249 (426)
T 2r8c_A 172 DGVDEVRRAVREELQMGADQIKIMASGGVASPTDPVGVFGYSEDEIRAIVAEAQGRGTYVLAHAY--TPAAIARAVRCGV 249 (426)
T ss_dssp CSHHHHHHHHHHHHHHTCSSEEEECBCCSSSSSCCSSCBCSCHHHHHHHHHHHHHTTCCEEEEEC--SHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCcccccCCHHHHHHHHHHHHHcCCEEEEEeC--ChHHHHHHHHcCC
Confidence 4688999999888888887766532 11111 1 11 13456778888888877877655443 4456666667777
Q ss_pred CeeccC
Q 020848 130 TAYNHN 135 (320)
Q Consensus 130 d~v~i~ 135 (320)
+.+.+.
T Consensus 250 ~~i~H~ 255 (426)
T 2r8c_A 250 RTIEHG 255 (426)
T ss_dssp SEEEEC
T ss_pred CEEecC
Confidence 766554
No 141
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=79.81 E-value=23 Score=31.46 Aligned_cols=44 Identities=14% Similarity=0.095 Sum_probs=32.0
Q ss_pred CCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 149 TRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 149 ~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
-..+...++..+.+++.|+.+.++. ..++.-.+...+.++..++
T Consensus 271 ~GGit~~~~i~~~A~~~g~~~~~~~---~~es~i~~~a~~~laaa~~ 314 (379)
T 2rdx_A 271 LGGLSKARRTRDFLIDNRMPVVAED---SWGGEIASAAVAHFAASTP 314 (379)
T ss_dssp TTSHHHHHHHHHHHHHTTCCEEEEC---SBCSHHHHHHHHHHHHTSC
T ss_pred cCCHHHHHHHHHHHHHcCCeEEEee---ccCcHHHHHHHHHHHHcCC
Confidence 3468888899999999999875553 2466666777777776664
No 142
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=79.79 E-value=5.1 Score=33.13 Aligned_cols=71 Identities=13% Similarity=0.178 Sum_probs=47.5
Q ss_pred HHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHh---ccCeeccC
Q 020848 61 VMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKA---GLTAYNHN 135 (320)
Q Consensus 61 i~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~a---Gld~v~i~ 135 (320)
..+.++.+.+.|+..+.+.+......+.... ++.+++++ ..++++..+.|..+.+.+.++.++ |++.+.++
T Consensus 151 ~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~~----~~~~~~l~~~~~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~vG 225 (244)
T 2y88_A 151 LWDVLERLDSEGCSRFVVTDITKDGTLGGPN----LDLLAGVADRTDAPVIASGGVSSLDDLRAIATLTHRGVEGAIVG 225 (244)
T ss_dssp HHHHHHHHHHTTCCCEEEEETTTTTTTSCCC----HHHHHHHHTTCSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEEC
T ss_pred HHHHHHHHHhCCCCEEEEEecCCccccCCCC----HHHHHHHHHhCCCCEEEECCCCCHHHHHHHHhhccCCCCEEEEc
Confidence 3444555666899999887643321111222 33444444 347888888888888999999998 99998876
No 143
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=79.52 E-value=26 Score=31.09 Aligned_cols=111 Identities=17% Similarity=0.194 Sum_probs=60.0
Q ss_pred HHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhh-cCceEEEeCCCCCHHHHHHHHHhccCeeccCcccc----HH
Q 020848 67 KAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTS----RE 141 (320)
Q Consensus 67 ~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~-~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~let~----~~ 141 (320)
.+.+.|++.|.+..+ .|.+ +.+.+.++.+++ .++++...+ ..+.+.++.+.++|+|.|.++.... .+
T Consensus 112 ~l~eaGad~I~ld~a----~G~~---~~~~~~i~~i~~~~~~~Vivg~-v~t~e~A~~l~~aGaD~I~VG~~~Gs~~~tr 183 (361)
T 3khj_A 112 LLVEAGVDVIVLDSA----HGHS---LNIIRTLKEIKSKMNIDVIVGN-VVTEEATKELIENGADGIKVGIGPGSICTTR 183 (361)
T ss_dssp HHHHTTCSEEEECCS----CCSB---HHHHHHHHHHHHHCCCEEEEEE-ECSHHHHHHHHHTTCSEEEECSSCCTTCCHH
T ss_pred HHHHcCcCeEEEeCC----CCCc---HHHHHHHHHHHHhcCCcEEEcc-CCCHHHHHHHHHcCcCEEEEecCCCcCCCcc
Confidence 344556666655321 1323 456677777774 477765422 3678999999999999998864321 11
Q ss_pred HHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeC-CCHHHHHHHHHH
Q 020848 142 FYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLG-EAEEDRVGLLHT 190 (320)
Q Consensus 142 ~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glg-et~ed~~~~l~~ 190 (320)
...... ...+..+.+..+.+.+.++++ +..=| .+.+|+.+.+..
T Consensus 184 ~~~g~g-~p~~~~i~~v~~~~~~~~iPV----IA~GGI~~~~di~kala~ 228 (361)
T 3khj_A 184 IVAGVG-VPQITAIEKCSSVASKFGIPI----IADGGIRYSGDIGKALAV 228 (361)
T ss_dssp HHTCBC-CCHHHHHHHHHHHHHHHTCCE----EEESCCCSHHHHHHHHHH
T ss_pred cccCCC-CCcHHHHHHHHHHHhhcCCeE----EEECCCCCHHHHHHHHHc
Confidence 111111 123333333333344456553 33123 367787776653
No 144
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=79.48 E-value=15 Score=30.14 Aligned_cols=75 Identities=15% Similarity=0.254 Sum_probs=38.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeecc
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNH 134 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i 134 (320)
++.|++...++...+.|.+-|.-.+|.. ++| ...+++..+.+.. ...+.+-...|..+.+.+..+.++|.+++..
T Consensus 130 l~~e~i~~a~~ia~eaGADfVKTsTGf~-~~g--at~~dv~~m~~~v-g~~v~VkaaGGirt~~~al~~i~aGa~RiG~ 204 (220)
T 1ub3_A 130 FSPEEIARLAEAAIRGGADFLKTSTGFG-PRG--ASLEDVALLVRVA-QGRAQVKAAGGIRDRETALRMLKAGASRLGT 204 (220)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEECCCSSS-SCC--CCHHHHHHHHHHH-TTSSEEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCEEEeCCCCC-CCC--CCHHHHHHHHHhh-CCCCeEEEECCCCCHHHHHHHHHCCCcccch
Confidence 4666666666666667766665543321 112 1222222222222 2234555666666666666666677775544
No 145
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=79.42 E-value=8.4 Score=33.24 Aligned_cols=79 Identities=14% Similarity=0.000 Sum_probs=57.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccc------C---C---------CC---CCchhHHHHHHHHHHhh-hc--CceEEE
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAW------R---D---------TI---GRKTNFNQILEYVKDIR-DM--GMEVCC 111 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~------~---~---------~~---ge~~~~~~l~~~i~~~k-~~--~~~i~~ 111 (320)
++.+++.+.++.+.+.|++.+.+.+.. . . .+ | +...+.-++.++.++ .. ++++..
T Consensus 169 ~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg-~~~~~~~~~~i~~v~~~~~~~ipvi~ 247 (311)
T 1jub_A 169 FDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGG-AYIKPTALANVRAFYTRLKPEIQIIG 247 (311)
T ss_dssp CSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEES-GGGHHHHHHHHHHHHTTSCTTSEEEE
T ss_pred CCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCcccc-ccccHHHHHHHHHHHHhcCCCCCEEE
Confidence 477788888888888999988775421 0 0 00 2 222445567788887 44 688889
Q ss_pred eCCCCCHHHHHHHHHhccCeeccC
Q 020848 112 TLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 112 ~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
+.|..+.+.+.++..+|.|.|.++
T Consensus 248 ~GGI~~~~da~~~l~~GAd~V~vg 271 (311)
T 1jub_A 248 TGGIETGQDAFEHLLCGATMLQIG 271 (311)
T ss_dssp ESSCCSHHHHHHHHHHTCSEEEEC
T ss_pred ECCCCCHHHHHHHHHcCCCEEEEc
Confidence 999999988888778999999886
No 146
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=79.33 E-value=19 Score=32.52 Aligned_cols=68 Identities=19% Similarity=0.321 Sum_probs=47.5
Q ss_pred HHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhc-CceEEEeCCCCCHHHHHHHHHhccCeeccCcc
Q 020848 62 MQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM-GMEVCCTLGMLEKHQAIELKKAGLTAYNHNLD 137 (320)
Q Consensus 62 ~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~-~~~i~~~~g~l~~e~l~~L~~aGld~v~i~le 137 (320)
.+.++.+.+.|++.|.|.++ .|.| +.+.+.++.+++. ++.+... +..+.+.++.+.++|+|.|.++..
T Consensus 146 ~e~~~~lveaGvdvIvldta----~G~~---~~~~e~I~~ik~~~~i~Vi~g-~V~t~e~A~~a~~aGAD~I~vG~g 214 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSA----HGHS---LNIIRTLKEIKSKMNIDVIVG-NVVTEEATKELIENGADGIKVGIG 214 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCS----CCSB---HHHHHHHHHHHTTCCCEEEEE-EECSHHHHHHHHHTTCSEEEECC-
T ss_pred HHHHHHHHHcCCCEEEEeCC----CCCc---ccHHHHHHHHHhcCCCeEEEe-ecCCHHHHHHHHHcCCCEEEEeCC
Confidence 45567777789998877432 1323 4567777888753 7775542 236799999999999999988654
No 147
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=79.29 E-value=31 Score=29.98 Aligned_cols=68 Identities=10% Similarity=0.120 Sum_probs=42.6
Q ss_pred HHHHHHcCCCEEEEecccCCCCCCch-----hHHHHHHHHHHhhhc-CceE-EEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 65 AQKAKEAGSTRFCMGAAWRDTIGRKT-----NFNQILEYVKDIRDM-GMEV-CCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 65 ~~~~~~~g~~~i~l~~g~~~~~ge~~-----~~~~l~~~i~~~k~~-~~~i-~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
++...+.|++.+.+...+-.... |. ..+++.++++.+++. ++.+ ....|. ...+..|.+.|+|.+++.
T Consensus 185 ~~~~~~aGad~i~i~d~~~~~ls-p~~f~ef~~p~~k~i~~~i~~~~g~~~i~~~~g~--~~~l~~l~~~g~d~~~~d 259 (338)
T 2eja_A 185 LKEQIKAGADVVQIFDSWVNNLS-LEDYGEYVYPYVNYLISELKDFSDTPVIYFFRGS--SSFIDLAVDYRADALSVD 259 (338)
T ss_dssp HHHHHHTTCSEEEEEETTGGGSC-HHHHHHHTHHHHHHHHHHHHHHCCCCEEEEESSH--HHHHHHHTTSCCSEEECC
T ss_pred HHHHHHhCCCEEEEecCccccCC-HHHHHHHhHHHHHHHHHHHhhcCCCCEEEEcCCc--HHHHHHHHHcCCCEEEeC
Confidence 34445689988877543322222 32 235566666777755 6663 344554 678999999999988774
No 148
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=79.02 E-value=21 Score=32.48 Aligned_cols=42 Identities=12% Similarity=0.090 Sum_probs=31.5
Q ss_pred CCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 150 RSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
......++.++.|++.|+.+.++ ..++.-.+...+.++..++
T Consensus 316 GGitea~~ia~~A~~~gi~~~~~----~~es~i~~~a~~hlaaa~~ 357 (428)
T 3bjs_A 316 GGITEGIRIAAMASAYRIPINAH----SSATGLNHAATIHFLAATE 357 (428)
T ss_dssp SCHHHHHHHHHHHHHTTCCBCCB----CCSSHHHHHHHHHHHHHCT
T ss_pred CCHHHHHHHHHHHHHcCCeEEec----CCCcHHHHHHHHHHHHhCC
Confidence 46888899999999999987666 3466666666677766664
No 149
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=78.52 E-value=8.4 Score=33.31 Aligned_cols=79 Identities=16% Similarity=-0.017 Sum_probs=56.0
Q ss_pred CCHHHHHHHHHHHHHcC-CCEEEEecccC-----C-------------C---CCCchhHHHHHHHHHHhh-hc-CceEEE
Q 020848 56 MTKDAVMQAAQKAKEAG-STRFCMGAAWR-----D-------------T---IGRKTNFNQILEYVKDIR-DM-GMEVCC 111 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g-~~~i~l~~g~~-----~-------------~---~ge~~~~~~l~~~i~~~k-~~-~~~i~~ 111 (320)
++.+++.+.++.+.+.| ++.+.+.+... . . .| +...+.-++.++.++ .. ++++..
T Consensus 171 ~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg-~~~~p~~~~~i~~v~~~~~~ipvi~ 249 (314)
T 2e6f_A 171 FDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGG-KYILPTALANVNAFYRRCPDKLVFG 249 (314)
T ss_dssp CCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEES-GGGHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCc-ccccHHHHHHHHHHHHhcCCCCEEE
Confidence 46778888888888889 88877644210 0 0 01 122344567777777 45 788989
Q ss_pred eCCCCCHHHHHHHHHhccCeeccC
Q 020848 112 TLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 112 ~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
+.|..+.+.+.++..+|.|.|.++
T Consensus 250 ~GGI~~~~da~~~l~~GAd~V~ig 273 (314)
T 2e6f_A 250 CGGVYSGEDAFLHILAGASMVQVG 273 (314)
T ss_dssp ESSCCSHHHHHHHHHHTCSSEEEC
T ss_pred ECCCCCHHHHHHHHHcCCCEEEEc
Confidence 999999988888888999998886
No 150
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=78.51 E-value=7.3 Score=34.41 Aligned_cols=80 Identities=8% Similarity=0.009 Sum_probs=52.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHhc-cCeec
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAG-LTAYN 133 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~aG-ld~v~ 133 (320)
.+.++..+.++.+.+. +..+.+..|.......+..-....++++.+| ..++++..+.+..+.+.++++.+.| +|.|.
T Consensus 227 ~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~ 305 (343)
T 3kru_A 227 INIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCNIKTSAVGLITTQELAEEILSNERADLVA 305 (343)
T ss_dssp CCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCEEEEESSCCCHHHHHHHHHTTSCSEEE
T ss_pred ccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcCcccceeeeeeHHHHHHHHHhchhhHHHH
Confidence 4678888888888888 8888885432211000000011344555666 3478887777777899988888887 89888
Q ss_pred cCc
Q 020848 134 HNL 136 (320)
Q Consensus 134 i~l 136 (320)
++=
T Consensus 306 iGR 308 (343)
T 3kru_A 306 LGR 308 (343)
T ss_dssp ESH
T ss_pred HHH
Confidence 873
No 151
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=78.45 E-value=27 Score=28.86 Aligned_cols=152 Identities=8% Similarity=0.150 Sum_probs=84.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhc--CceEEEeC------CC--CCHHHHHHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTL------GM--LEKHQAIELK 125 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~--~~~i~~~~------g~--l~~e~l~~L~ 125 (320)
.+.+++++.++.+...|++-+-+= ...-+....+++.+.++.+++. ++++..|. |. .+++.+..|.
T Consensus 14 ~~~~e~~~~~~~~~~~~~D~vElR----vD~l~~~~~~~v~~~~~~lr~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll 89 (238)
T 1sfl_A 14 LSIEETLIQKINHRIDAIDVLELR----IDQFENVTVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFTNDSYLNLI 89 (238)
T ss_dssp C---CHHHHHHHHTTTTCSEEEEE----CTTSTTCCHHHHHHHHHHHC---CCSEEEEECCBGGGTSCBCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHhhhcCCCEEEEE----ecccccCCHHHHHHHHHHHHHhccCCCEEEEeeccccCCCCCCCHHHHHHHH
Confidence 356888888888888888877662 1111122467788888888753 56765543 32 4555554444
Q ss_pred Hhc-----cCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeE-EEEeCCCHHHHHHHHHHHhcCCCCCC
Q 020848 126 KAG-----LTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGG-IIGLGEAEEDRVGLLHTLATLPTHPE 199 (320)
Q Consensus 126 ~aG-----ld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~-i~Glget~ed~~~~l~~l~~l~~~~~ 199 (320)
+.+ ++.|-+-+... .+-+.+.+.++.+++.|.++-... -+.-..+.+++.+.+..+.++| ++
T Consensus 90 ~~~~~~~~~d~iDvEl~~~----------~~~~~~~~l~~~~~~~~~kvI~S~Hdf~~tp~~~el~~~~~~~~~~g--aD 157 (238)
T 1sfl_A 90 SDLANINGIDMIDIEWQAD----------IDIEKHQRIITHLQQYNKEVIISHHNFESTPPLDELQFIFFKMQKFN--PE 157 (238)
T ss_dssp HHGGGCTTCCEEEEECCTT----------SCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHTTC--CS
T ss_pred HHHHHhCCCCEEEEEccCC----------CChHHHHHHHHHHHhcCCEEEEEecCCCCCcCHHHHHHHHHHHHHcC--CC
Confidence 333 45555544320 022233455667777777742222 1111234588999999999998 66
Q ss_pred eeeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHh
Q 020848 200 SVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIV 235 (320)
Q Consensus 200 ~v~~~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~ 235 (320)
.+.+-.. +-+.++.+++......+
T Consensus 158 ivKia~~------------a~~~~D~l~ll~~~~~~ 181 (238)
T 1sfl_A 158 YVKLAVM------------PHNKNDVLNLLQAMSTF 181 (238)
T ss_dssp EEEEEEC------------CSSHHHHHHHHHHHHHH
T ss_pred EEEEEec------------CCCHHHHHHHHHHHHHH
Confidence 5555321 23466777777655443
No 152
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=78.41 E-value=9.9 Score=31.38 Aligned_cols=61 Identities=10% Similarity=0.029 Sum_probs=36.8
Q ss_pred CCEEEEecccCCCCCCchhHHHHHHHHHHhhhc--CceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 73 STRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 73 ~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~--~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
++.+.+.+-.++.+|.+ ..+..++.++.+++. ++.+.+..| ++.+.+..+.++|.|.+-.+
T Consensus 139 ~D~VlvmsV~pGf~gq~-f~~~~l~ki~~lr~~~~~~~I~VdGG-I~~~ti~~~~~aGAd~~V~G 201 (227)
T 1tqx_A 139 INTVLVMTVEPGFGGQS-FMHDMMGKVSFLRKKYKNLNIQVDGG-LNIETTEISASHGANIIVAG 201 (227)
T ss_dssp CSEEEEESSCTTCSSCC-CCGGGHHHHHHHHHHCTTCEEEEESS-CCHHHHHHHHHHTCCEEEES
T ss_pred cCEEEEeeeccCCCCcc-cchHHHHHHHHHHHhccCCeEEEECC-CCHHHHHHHHHcCCCEEEEe
Confidence 55555544333333432 234455555555532 566666655 67888999999999887765
No 153
>3chv_A Prokaryotic domain of unknown function (DUF849) W barrel fold; TIM barrel fold, structural genomics, joint center for struc genomics; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A
Probab=78.11 E-value=32 Score=29.40 Aligned_cols=225 Identities=10% Similarity=0.017 Sum_probs=121.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc-hhHHHHHHHHHHhhhc--CceEEEeCCCC---CHHHHHHHHHhcc
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK-TNFNQILEYVKDIRDM--GMEVCCTLGML---EKHQAIELKKAGL 129 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~-~~~~~l~~~i~~~k~~--~~~i~~~~g~l---~~e~l~~L~~aGl 129 (320)
+++|||.+.+....+.|..-+++-. +.+.|.| ...+.+.+++..+++. ++-+..|.|-. .++.+..+ +..-
T Consensus 31 vTpeEia~~A~~~~~AGAaivHlH~--Rd~~G~ps~d~~~~~e~~~~IR~~~pd~ii~~TTgg~~~~~eeR~~~~-~~~P 107 (284)
T 3chv_A 31 ITVSEQVESTQEAFEAGAAIAHCHV--RNDDGTPSSDPDRFARLTEGLHTHCPGMIVQFSTGGRSGAGQARGGML-PLKP 107 (284)
T ss_dssp CSHHHHHHHHHHHHHHTCCEEEECE--ECTTSCEECCHHHHHHHHHHHHHHSTTCEEEECCCTTTCCGGGGGTTG-GGCC
T ss_pred CCHHHHHHHHHHHHHcCCcEEEeee--cCCCCCcCCCHHHHHHHHHHHHHhCCCeEEEeCCCCCCCCHHHHHHhh-hcCC
Confidence 8999999999999999998888843 3332434 3456667777777743 66666665432 23334433 3444
Q ss_pred CeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCC--CCCeeeeeeee
Q 020848 130 TAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPT--HPESVPINALL 207 (320)
Q Consensus 130 d~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~--~~~~v~~~~~~ 207 (320)
|..+++.=+.. +...--..+++.+.+.++.+++.|++....+ + +..++.....+++ .|. .+.++.|. |
T Consensus 108 e~aSl~~Gs~N--f~~~v~~n~~~~~~~~~~~~~e~Gv~pE~e~-f----d~g~l~~~~~l~~-~Gll~~p~~~~~v-l- 177 (284)
T 3chv_A 108 DMASLSVGSNN--FPSRVYENPPDLVDWLAAQMRSYRVTPEIEA-F----DLSHILRAIDMHG-RGLLYGKLYVQFV-M- 177 (284)
T ss_dssp SEEEECCSCEE--CSSSEECCCHHHHHHHHHHHHHHTCEEEEEE-S----SHHHHHHHHHHHH-TTCSCSSCEEEEE-E-
T ss_pred CEEEecCcccc--cCCccccCCHHHHHHHHHHHHHcCCEEEEEE-E----CHHHHHHHHHHHH-cCCCCCCceEEEE-E-
Confidence 55444443320 0000012468888889999999998765442 2 3455655544443 342 12222221 1
Q ss_pred ecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccCh---hHHHHHHHcCCceEee-CCccccCCC------
Q 020848 208 AVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSM---PEQALCFLAGANSIFT-GEKLLTTPN------ 277 (320)
Q Consensus 208 p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~---~~~~~~~~~Gan~~~~-~~~~~~~~~------ 277 (320)
|-+.. -+.+++.+..++..+..-.|...+.+. +++. +....++..|.+.-+. +|.+....|
T Consensus 178 ---Gv~~g--~~~~~~~L~~~~~~~p~~~~~~~ws~~----g~Gr~q~p~~~~A~~~GGhvRVGlEDnl~~~~G~~A~sN 248 (284)
T 3chv_A 178 ---GVKNA--MPADREVFDFYVRMMRTRAPQAEWCAA----GIGANQLTVNEWAIAAGGHTRTGLEDNIRLDRQTLAPSN 248 (284)
T ss_dssp ---CCTTS--CCCCHHHHHHHHHHHHHHCTTSEEEEE----ECTTHHHHHHHHHHHTTCEEEESTTTCCBSSSSCBCCCH
T ss_pred ---ecCCC--CCCCHHHHHHHHHhccCCCCCceEEEE----ecCcchhHHHHHHHHcCCCeEEecccccCCCCCCCCCCH
Confidence 21211 246677766666543211111222221 2221 2334567778874332 233222222
Q ss_pred -CChhHHHHHHHHcCCCcCCCCCCcC
Q 020848 278 -NDFDADQLMFKVLGLTPKAPSFHEG 302 (320)
Q Consensus 278 -~~~~~~~~~i~~~G~~p~~~~~~~~ 302 (320)
.-+++.+++++++|+.|...+.-+.
T Consensus 249 a~lV~~~~~i~~~lgr~vAtp~eAR~ 274 (284)
T 3chv_A 249 AALVRRSVELCDKYQRPVASWQQARE 274 (284)
T ss_dssp HHHHHHHHHHHHHTTCCBCCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCCCHHHHHH
Confidence 1377788899999999887654333
No 154
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=77.91 E-value=14 Score=32.00 Aligned_cols=66 Identities=24% Similarity=0.247 Sum_probs=36.0
Q ss_pred CCHHHHHHHHHHHHHc----CCCEEEEecccCCCCCCchhHHHHHHHHHHhh---hcCceEEEeCCCCCHHHHHHHHHh
Q 020848 56 MTKDAVMQAAQKAKEA----GSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR---DMGMEVCCTLGMLEKHQAIELKKA 127 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~----g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k---~~~~~i~~~~g~l~~e~l~~L~~a 127 (320)
.+.++..+.++.+++. |. .++|.. +.. -.....+-+.|++++ +.|..+..-.+..+.+.++++.++
T Consensus 140 ~~~~e~~~rI~Aa~~A~~~~~~-d~~I~A--RTD---a~~~~gldeAi~Ra~ay~eAGAD~ifi~~~~~~~~~~~i~~~ 212 (307)
T 3lye_A 140 VSRDEYLVRIRAAVATKRRLRS-DFVLIA--RTD---ALQSLGYEECIERLRAARDEGADVGLLEGFRSKEQAAAAVAA 212 (307)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTC-CCEEEE--EEC---CHHHHCHHHHHHHHHHHHHTTCSEEEECCCSCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHhcCC-CeEEEE--ech---hhhccCHHHHHHHHHHHHHCCCCEEEecCCCCHHHHHHHHHH
Confidence 6777777766655432 43 344433 111 112233555555555 456665445566777788877665
No 155
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=77.87 E-value=12 Score=30.42 Aligned_cols=68 Identities=9% Similarity=0.076 Sum_probs=43.1
Q ss_pred HHHcCCCEEEEecccCCCCCCch-hHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 68 AKEAGSTRFCMGAAWRDTIGRKT-NFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 68 ~~~~g~~~i~l~~g~~~~~ge~~-~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
+.+.|++.+.++..+........ ....-++.++.++ ..++++....|..+.+.+.++.++|+|.+.++
T Consensus 135 ~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~ipvia~GGI~~~~~~~~~~~~Gad~v~vG 204 (223)
T 1y0e_A 135 AARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVDAKVIAEGNVITPDMYKRVMDLGVHCSVVG 204 (223)
T ss_dssp HHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHCCSEEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhCCCCEEEecCCCCHHHHHHHHHcCCCEEEEC
Confidence 45678877654321111000001 0122345666666 35788888888889999999999999999887
No 156
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=77.75 E-value=23 Score=33.45 Aligned_cols=94 Identities=13% Similarity=0.093 Sum_probs=60.4
Q ss_pred HHHHHHHHHcCCCEEEEecccC-CCCCCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHH-hccCeeccCccc
Q 020848 62 MQAAQKAKEAGSTRFCMGAAWR-DTIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKK-AGLTAYNHNLDT 138 (320)
Q Consensus 62 ~~~~~~~~~~g~~~i~l~~g~~-~~~ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~-aGld~v~i~let 138 (320)
.+.++.+.+.|+..+.+++-+. .+...+ . +++++.++ ..++++..+.|..+.+.++++.+ .|++.+.++=
T Consensus 455 ~e~a~~~~~~Ga~~il~t~~~~dG~~~G~-d----~~li~~l~~~~~iPVIasGGi~s~~d~~~~~~~~G~~gvivg~-- 527 (555)
T 1jvn_A 455 WELTRACEALGAGEILLNCIDKDGSNSGY-D----LELIEHVKDAVKIPVIASSGAGVPEHFEEAFLKTRADACLGAG-- 527 (555)
T ss_dssp HHHHHHHHHTTCCEEEECCGGGTTTCSCC-C----HHHHHHHHHHCSSCEEECSCCCSHHHHHHHHHHSCCSEEEESH--
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCCCCC-C----HHHHHHHHHhCCccEEEECCCCCHHHHHHHHHhcCChHHHHHH--
Confidence 4456667789999998865221 111112 2 44555555 35788889999999999999988 7999887751
Q ss_pred cHHHHhhhCCCCCHHHHHHHHHHHHHcCCeee
Q 020848 139 SREFYSKIITTRSYDERLETLKHVREAGINVC 170 (320)
Q Consensus 139 ~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~ 170 (320)
.+ ....-++.+..+ .+.+.|+.+.
T Consensus 528 --a~---~~~~~~~~e~~~---~l~~~gi~~r 551 (555)
T 1jvn_A 528 --MF---HRGEFTVNDVKE---YLLEHGLKVR 551 (555)
T ss_dssp --HH---HTTSCCHHHHHH---HHHHTTCCCC
T ss_pred --HH---HcCCCCHHHHHH---HHHHCCCccc
Confidence 11 223446655543 4667787654
No 157
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=77.69 E-value=15 Score=32.87 Aligned_cols=42 Identities=17% Similarity=0.081 Sum_probs=28.4
Q ss_pred CCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 150 RSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
......++....+.+.|+.+.++.+ ++.=-+...+.++..++
T Consensus 282 GGit~~~~ia~~A~~~gi~~~~h~~----~~~i~~aa~~hlaaa~~ 323 (389)
T 3ozy_A 282 GGITEALAISASAASAHLAWNPHTF----NDIITVAANLHLVAASP 323 (389)
T ss_dssp SCHHHHHHHHHHHHHTTCEECCCCT----TSHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHHcCCEEEecCC----CcHHHHHHHHHHHHhCC
Confidence 4688888999999999998766632 34334455566655554
No 158
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=77.69 E-value=22 Score=29.30 Aligned_cols=70 Identities=13% Similarity=0.151 Sum_probs=52.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhh-c-CceEEEeCCCCCHHHHHHHHHhccCeec
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-M-GMEVCCTLGMLEKHQAIELKKAGLTAYN 133 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~-~-~~~i~~~~g~l~~e~l~~L~~aGld~v~ 133 (320)
++++++...+..+.-+|..-+++.+.+ ..+ . .++++++++ . ++++.+--|..+.+.++++. +|.|.+.
T Consensus 137 ~~~e~~~~~a~~a~~~g~~~VYld~sG--~~~---~----~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~-~gAD~VV 206 (228)
T 3vzx_A 137 LNMDDIVAYARVSELLQLPIFYLEYSG--VLG---D----IEAVKKTKAVLETSTLFYGGGIKDAETAKQYA-EHADVIV 206 (228)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECTT--SCC---C----HHHHHHHHHHCSSSEEEEESSCCSHHHHHHHH-TTCSEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCC--CcC---C----HHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-hCCCEEE
Confidence 468898888887776788888876522 112 1 455566663 4 58888889999999999998 7999998
Q ss_pred cC
Q 020848 134 HN 135 (320)
Q Consensus 134 i~ 135 (320)
++
T Consensus 207 VG 208 (228)
T 3vzx_A 207 VG 208 (228)
T ss_dssp EC
T ss_pred EC
Confidence 86
No 159
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=77.68 E-value=23 Score=32.87 Aligned_cols=118 Identities=14% Similarity=0.119 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhh-c-CceEEEeCCCCCHHHHHHHHHhccCeeccCcc
Q 020848 60 AVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-M-GMEVCCTLGMLEKHQAIELKKAGLTAYNHNLD 137 (320)
Q Consensus 60 ei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~-~-~~~i~~~~g~l~~e~l~~L~~aGld~v~i~le 137 (320)
+..+.++.+.+.|++.+.+.+.. +. .+.+.+.++.+++ . ++.+... ...+.+.++.+.++|+|.|.++.-
T Consensus 229 ~~~~~a~~l~~aG~d~I~id~a~----g~---~~~~~~~v~~i~~~~p~~~Vi~g-~v~t~e~a~~l~~aGaD~I~vg~g 300 (490)
T 4avf_A 229 DTGERVAALVAAGVDVVVVDTAH----GH---SKGVIERVRWVKQTFPDVQVIGG-NIATAEAAKALAEAGADAVKVGIG 300 (490)
T ss_dssp THHHHHHHHHHTTCSEEEEECSC----CS---BHHHHHHHHHHHHHCTTSEEEEE-EECSHHHHHHHHHTTCSEEEECSS
T ss_pred chHHHHHHHhhcccceEEecccC----Cc---chhHHHHHHHHHHHCCCceEEEe-eeCcHHHHHHHHHcCCCEEEECCC
Confidence 44556677778899988886431 21 2466777888874 3 5555442 247889999999999999988542
Q ss_pred cc-H-HHHhhhCC-CCCHHHHHHHHHHHHHcCCeeeeeEEEEeC-CCHHHHHHHHH
Q 020848 138 TS-R-EFYSKIIT-TRSYDERLETLKHVREAGINVCSGGIIGLG-EAEEDRVGLLH 189 (320)
Q Consensus 138 t~-~-~~~~~i~~-~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glg-et~ed~~~~l~ 189 (320)
.. . .......- ...+..+.+..+.+++.++++ +..=| .+.+|+.+.+.
T Consensus 301 ~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPV----Ia~GGI~~~~di~kal~ 352 (490)
T 4avf_A 301 PGSICTTRIVAGVGVPQISAIANVAAALEGTGVPL----IADGGIRFSGDLAKAMV 352 (490)
T ss_dssp CSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCE----EEESCCCSHHHHHHHHH
T ss_pred CCcCCCccccCCCCccHHHHHHHHHHHhccCCCcE----EEeCCCCCHHHHHHHHH
Confidence 21 1 11111111 123444444444444556553 33112 37788877765
No 160
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=77.60 E-value=6 Score=32.76 Aligned_cols=68 Identities=13% Similarity=0.167 Sum_probs=44.2
Q ss_pred HHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHh---ccCeeccC
Q 020848 64 AAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKA---GLTAYNHN 135 (320)
Q Consensus 64 ~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~a---Gld~v~i~ 135 (320)
.++.+.+.|+..+.+.+..+...+... -++.+++++ ..++++..+.|..+.+.+.++.++ |++.+.++
T Consensus 151 ~~~~~~~~G~~~i~~~~~~~~~~~~g~----~~~~~~~i~~~~~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~vG 222 (244)
T 1vzw_A 151 TLDRLNKEGCARYVVTDIAKDGTLQGP----NLELLKNVCAATDRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVG 222 (244)
T ss_dssp HHHHHHHTTCCCEEEEEC-------CC----CHHHHHHHHHTCSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEEC
T ss_pred HHHHHHhCCCCEEEEeccCcccccCCC----CHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHhhccCCCceeeee
Confidence 344555689988888653322111111 234455555 347888888888888999999999 99998886
No 161
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=77.47 E-value=11 Score=33.16 Aligned_cols=24 Identities=13% Similarity=0.059 Sum_probs=19.0
Q ss_pred CCHHHHHHHHHHHHHcCCeeeeeE
Q 020848 150 RSYDERLETLKHVREAGINVCSGG 173 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~v~~~~ 173 (320)
..+...++..+.+++.|+.+.++.
T Consensus 275 GGi~~~~~i~~~A~~~g~~~~~~~ 298 (359)
T 1mdl_A 275 GGVTGWIRASALAQQFGIPMSSHL 298 (359)
T ss_dssp THHHHHHHHHHHHHHTTCCBCCBS
T ss_pred CCHHHHHHHHHHHHHcCCeEeecc
Confidence 357778888999999999876663
No 162
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=77.40 E-value=39 Score=30.30 Aligned_cols=70 Identities=16% Similarity=0.330 Sum_probs=47.9
Q ss_pred HHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhc--CceEEEeCCCCCHHHHHHHHHhccCeeccCccc
Q 020848 61 VMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDT 138 (320)
Q Consensus 61 i~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~--~~~i~~~~g~l~~e~l~~L~~aGld~v~i~let 138 (320)
..+.++.+.+.|++.+.+..+ .+.| +.+.+.++.+++. ++++.+ .+..+.+.++.+.++|+|.|.++...
T Consensus 154 ~~~~a~~~~~~G~d~i~i~~~----~g~~---~~~~e~i~~ir~~~~~~pviv-~~v~~~~~a~~a~~~Gad~I~vg~~~ 225 (404)
T 1eep_A 154 TIERVEELVKAHVDILVIDSA----HGHS---TRIIELIKKIKTKYPNLDLIA-GNIVTKEAALDLISVGADCLKVGIGP 225 (404)
T ss_dssp HHHHHHHHHHTTCSEEEECCS----CCSS---HHHHHHHHHHHHHCTTCEEEE-EEECSHHHHHHHHTTTCSEEEECSSC
T ss_pred HHHHHHHHHHCCCCEEEEeCC----CCCh---HHHHHHHHHHHHHCCCCeEEE-cCCCcHHHHHHHHhcCCCEEEECCCC
Confidence 345566667789988877321 1333 5667777787754 677654 23467899999999999999886543
No 163
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=77.30 E-value=13 Score=33.40 Aligned_cols=24 Identities=21% Similarity=0.217 Sum_probs=19.1
Q ss_pred CCHHHHHHHHHHHHHcCCe---eeeeE
Q 020848 150 RSYDERLETLKHVREAGIN---VCSGG 173 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~---v~~~~ 173 (320)
..+...++.+..+++.|+. +.++.
T Consensus 300 GGit~~~~i~~~A~~~gi~~~~~~~~~ 326 (392)
T 1tzz_A 300 YGLCEYQRTLEVLKTHGWSPSRCIPHG 326 (392)
T ss_dssp TCHHHHHHHHHHHHHTTCCGGGBCCSC
T ss_pred CCHHHHHHHHHHHHHCCCCCceEeecH
Confidence 3677888888899999988 77763
No 164
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=77.25 E-value=14 Score=33.16 Aligned_cols=42 Identities=24% Similarity=0.268 Sum_probs=28.2
Q ss_pred CCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 150 RSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
......++....+...|+.+..++ .++.=.+...+.++..++
T Consensus 286 GGit~~~~ia~~A~~~gi~~~~h~----~~~~i~~aa~~hl~aa~p 327 (392)
T 3ddm_A 286 GGFSGCLPVARAVVAAGLRYCPHY----LGAGIGLQASAHLLAAVP 327 (392)
T ss_dssp THHHHHHHHHHHHHHTTCEECCEE----CSCHHHHHHHHHHHHHSC
T ss_pred CCHHHHHHHHHHHHHcCCEEEecC----CchHHHHHHHHHHHHhCC
Confidence 357788899999999999875554 245444555566655554
No 165
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=76.88 E-value=9.8 Score=31.56 Aligned_cols=39 Identities=5% Similarity=-0.025 Sum_probs=24.0
Q ss_pred CHHHHHHHHHHHHHcCCe-eeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 151 SYDERLETLKHVREAGIN-VCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 151 ~~~~~l~~i~~a~~~Gi~-v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
+.+...+.++.+.+.|.+ +.+. .+ .+.+..+.+.+++.|
T Consensus 89 ~~~~~~~~i~~A~~lGa~~v~~~----~~--~~~~~~l~~~a~~~g 128 (262)
T 3p6l_A 89 KSSDWEKMFKFAKAMDLEFITCE----PA--LSDWDLVEKLSKQYN 128 (262)
T ss_dssp STTHHHHHHHHHHHTTCSEEEEC----CC--GGGHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHcCCCEEEec----CC--HHHHHHHHHHHHHhC
Confidence 445667788888888876 3222 22 244566666777776
No 166
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=76.68 E-value=16 Score=32.13 Aligned_cols=32 Identities=13% Similarity=0.145 Sum_probs=14.6
Q ss_pred HHHHHHHHHhhhcCce---EEEeCCCCCHHHHHHH
Q 020848 93 NQILEYVKDIRDMGME---VCCTLGMLEKHQAIEL 124 (320)
Q Consensus 93 ~~l~~~i~~~k~~~~~---i~~~~g~l~~e~l~~L 124 (320)
+++.++++.+.+.|.. +.-+.|..+++.+.++
T Consensus 149 e~~~~ia~~~~~~Ga~~i~l~DT~G~~~P~~v~~l 183 (345)
T 1nvm_A 149 EKLAEQGKLMESYGATCIYMADSGGAMSMNDIRDR 183 (345)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECTTCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEECCCcCccCHHHHHHH
Confidence 4555555555544433 2234455554444433
No 167
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=76.48 E-value=22 Score=31.61 Aligned_cols=42 Identities=10% Similarity=0.098 Sum_probs=28.9
Q ss_pred CCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcC
Q 020848 150 RSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 194 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 194 (320)
..+...++..+.+++.|+.+.++.+ .++.=.+...+.++..+
T Consensus 276 GGit~~~~i~~~A~~~g~~~~~~~~---~es~i~~aa~~hlaaa~ 317 (384)
T 2pgw_A 276 GGIQPMMKAAAVAEAAGLKICIHSS---FTTGITTCAEHHIGLAI 317 (384)
T ss_dssp TSHHHHHHHHHHHHHTTCCEEECCC---SCCHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHCCCeEeeccC---cCCHHHHHHHHHHHHhC
Confidence 3577778888999999998766643 45655555566665554
No 168
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=76.25 E-value=11 Score=32.51 Aligned_cols=67 Identities=24% Similarity=0.287 Sum_probs=41.0
Q ss_pred CCCHHHHHHHHHHHHHc----CCCEEEEecccCCCCCCchhHHHHHHHHHHhh---hcCceEEEeCCCCCHHHHHHHHHh
Q 020848 55 LMTKDAVMQAAQKAKEA----GSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR---DMGMEVCCTLGMLEKHQAIELKKA 127 (320)
Q Consensus 55 ~~s~eei~~~~~~~~~~----g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k---~~~~~i~~~~g~l~~e~l~~L~~a 127 (320)
..+.+|..+.++.+++. +. .++|.. +.. -.....+-+.|++++ +.|..+..-.|..+.+.++++.+.
T Consensus 131 l~~~~e~~~rI~Aa~~A~~~~~~-d~~I~A--RTD---a~~~~gldeAi~Ra~ay~eAGAD~ifi~g~~~~~ei~~~~~~ 204 (302)
T 3fa4_A 131 LVDTDTYVTRIRAAVQARQRIGS-DIVVIA--RTD---SLQTHGYEESVARLRAARDAGADVGFLEGITSREMARQVIQD 204 (302)
T ss_dssp BCCHHHHHHHHHHHHHHHHHHTC-CCEEEE--EEC---CHHHHCHHHHHHHHHHHHTTTCSEEEETTCCCHHHHHHHHHH
T ss_pred ecCHHHHHHHHHHHHHHHHhcCC-CEEEEE--Eec---ccccCCHHHHHHHHHHHHHcCCCEEeecCCCCHHHHHHHHHH
Confidence 36888888888766543 44 344432 111 122234666666665 457776566677888888888776
No 169
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=75.97 E-value=29 Score=27.93 Aligned_cols=163 Identities=14% Similarity=0.093 Sum_probs=92.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
.++++.++.++.+.+.|++-+-+.- . .+ .-.+.++.+++.++.+-... .++.+.++...++|.|.+..+
T Consensus 22 ~~~~~~~~~~~~l~~gGv~~iel~~--k----~~----~~~~~i~~~~~~~~~~gag~-vl~~d~~~~A~~~GAd~v~~~ 90 (207)
T 2yw3_A 22 RGGEDLLGLARVLEEEGVGALEITL--R----TE----KGLEALKALRKSGLLLGAGT-VRSPKEAEAALEAGAAFLVSP 90 (207)
T ss_dssp CSCCCHHHHHHHHHHTTCCEEEEEC--S----ST----HHHHHHHHHTTSSCEEEEES-CCSHHHHHHHHHHTCSEEEES
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeC--C----Ch----HHHHHHHHHhCCCCEEEeCe-EeeHHHHHHHHHcCCCEEEcC
Confidence 3556777788888888998887642 1 11 22345555554223233333 578899999999999988654
Q ss_pred ccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeeeeeeecCCCCCC
Q 020848 136 LDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQ 215 (320)
Q Consensus 136 let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~~~p~~gt~~~ 215 (320)
. + + .+.++.+++.|+.+ +.|. .|.+++... .+.| .+.+.++ | ..+
T Consensus 91 ~-~------------d----~~v~~~~~~~g~~~----i~G~-~t~~e~~~A----~~~G--ad~v~~f---p--a~~-- 135 (207)
T 2yw3_A 91 G-L------------L----EEVAALAQARGVPY----LPGV-LTPTEVERA----LALG--LSALKFF---P--AEP-- 135 (207)
T ss_dssp S-C------------C----HHHHHHHHHHTCCE----EEEE-CSHHHHHHH----HHTT--CCEEEET---T--TTT--
T ss_pred C-C------------C----HHHHHHHHHhCCCE----EecC-CCHHHHHHH----HHCC--CCEEEEe---c--Ccc--
Confidence 2 1 1 24455666677653 4453 366665444 3456 7788772 2 111
Q ss_pred CCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccChhHHHHHHHcCCceEeeCCcccc
Q 020848 216 DQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLT 274 (320)
Q Consensus 216 ~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~~~~~~~~~~Gan~~~~~~~~~~ 274 (320)
.-.- ..+...+..+|+..+-..+ ++..+.-...+.+|++.+..+..+..
T Consensus 136 ----~gG~---~~lk~l~~~~~~ipvvaiG---GI~~~n~~~~l~aGa~~vavgSai~~ 184 (207)
T 2yw3_A 136 ----FQGV---RVLRAYAEVFPEVRFLPTG---GIKEEHLPHYAALPNLLAVGGSWLLQ 184 (207)
T ss_dssp ----TTHH---HHHHHHHHHCTTCEEEEBS---SCCGGGHHHHHTCSSBSCEEESGGGS
T ss_pred ----ccCH---HHHHHHHhhCCCCcEEEeC---CCCHHHHHHHHhCCCcEEEEehhhhC
Confidence 1011 2234455566643332222 23333345667889998877764443
No 170
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=75.94 E-value=11 Score=33.78 Aligned_cols=127 Identities=9% Similarity=0.045 Sum_probs=63.0
Q ss_pred CHHHHHHHHHHHHHc-CCC-EEEEecccCCCCCCch-hHHHHHHHHHHhhhcCce-EEEeCCCCCHHHHHHHHHhccCee
Q 020848 57 TKDAVMQAAQKAKEA-GST-RFCMGAAWRDTIGRKT-NFNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKAGLTAY 132 (320)
Q Consensus 57 s~eei~~~~~~~~~~-g~~-~i~l~~g~~~~~ge~~-~~~~l~~~i~~~k~~~~~-i~~~~g~l~~e~l~~L~~aGld~v 132 (320)
++++-++.++.+++. |-+ .+.+ ... + .. ..++..++++.+.+.++. +.-....-+.+.+++|++. + .+
T Consensus 182 ~~~~d~~~v~avR~a~G~d~~l~v-Dan----~-~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~~~~~~~~l~~~-~-~i 253 (394)
T 3mqt_A 182 SDKEIVAYLRELREVIGWDMDMMV-DCL----Y-RWTDWQKARWTFRQLEDIDLYFIEACLQHDDLIGHQKLAAA-I-NT 253 (394)
T ss_dssp CHHHHHHHHHHHHHHHCSSSEEEE-ECT----T-CCSCHHHHHHHHHHTGGGCCSEEESCSCTTCHHHHHHHHHH-S-SS
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEE-ECC----C-CCCCHHHHHHHHHHHhhcCCeEEECCCCcccHHHHHHHHhh-C-CC
Confidence 466666666665543 432 2322 211 1 12 346666667766665654 2211122345566666654 1 12
Q ss_pred ccC----ccccH---HHHh---------hhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 133 NHN----LDTSR---EFYS---------KIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 133 ~i~----let~~---~~~~---------~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
.+. +.+.. +..+ ++.+-......++....+...|+.+..+.+ ++.=.....+.++..++
T Consensus 254 PIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~----~s~i~~aa~~hlaaa~p 328 (394)
T 3mqt_A 254 RLCGAEMSTTRFEAQEWLEKTGISVVQSDYNRCGGVTELLRIMDICEHHNAQLMPHNW----KTGITAAAARHFGIVCH 328 (394)
T ss_dssp EEEECTTCCHHHHHHHHHHHHCCSEECCCTTTSSCHHHHHHHHHHHHHHTCEECCCCC----SCHHHHHHHHHHHHHCT
T ss_pred CEEeCCCcCCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHHcCCEEeccCC----CchHHHHHHHHHHHhCC
Confidence 221 11111 1111 111224678888899999999998766653 34334455555555453
No 171
>3o0f_A Putative metal-dependent phosphoesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: AMP; 1.94A {Bifidobacterium adolescentis} PDB: 3e0f_A*
Probab=75.87 E-value=12 Score=32.42 Aligned_cols=17 Identities=29% Similarity=0.247 Sum_probs=8.3
Q ss_pred CCHHHHHHHHHHHhcCC
Q 020848 179 EAEEDRVGLLHTLATLP 195 (320)
Q Consensus 179 et~ed~~~~l~~l~~l~ 195 (320)
.+.++.....+++++.+
T Consensus 237 ~~~~~~~~~~~lA~~~g 253 (301)
T 3o0f_A 237 NPPEQRERLLTIAARHD 253 (301)
T ss_dssp SCHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHcC
Confidence 34455555555555443
No 172
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=75.81 E-value=9.5 Score=34.16 Aligned_cols=24 Identities=17% Similarity=0.108 Sum_probs=19.1
Q ss_pred CHHHHHHHHHHHHHcCCeeeeeEE
Q 020848 151 SYDERLETLKHVREAGINVCSGGI 174 (320)
Q Consensus 151 ~~~~~l~~i~~a~~~Gi~v~~~~i 174 (320)
.....++....+++.|+.+.++.+
T Consensus 300 Git~~~~ia~~A~~~gi~~~~h~~ 323 (383)
T 3toy_A 300 GITGWLNVAGQADAASIPMSSHIL 323 (383)
T ss_dssp HHHHHHHHHHHHHHHTCCBCCCSC
T ss_pred CHHHHHHHHHHHHHcCCEEeecCH
Confidence 578888899999999998766543
No 173
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=75.35 E-value=42 Score=29.46 Aligned_cols=86 Identities=17% Similarity=0.071 Sum_probs=53.7
Q ss_pred HHHHHHHHHhccCeeccCcccc-HHHHhhhCC---CCCHHHHHHHHHHHHH-cCCeeeeeEEEEeC--CCHHHHHHHHHH
Q 020848 118 KHQAIELKKAGLTAYNHNLDTS-REFYSKIIT---TRSYDERLETLKHVRE-AGINVCSGGIIGLG--EAEEDRVGLLHT 190 (320)
Q Consensus 118 ~e~l~~L~~aGld~v~i~let~-~~~~~~i~~---~~~~~~~l~~i~~a~~-~Gi~v~~~~i~Glg--et~ed~~~~l~~ 190 (320)
.+.++.+.++|+|.|.+..-.. ....+.-.. ..+.+...+.++.+++ .++++.+-+=+|.. .+.++..+.++.
T Consensus 73 ~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~ 152 (350)
T 3b0p_A 73 AEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEA 152 (350)
T ss_dssp HHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcCccccHHHHHHHHHH
Confidence 3455667788999988876544 333322111 1356666777777666 36666554445552 355678888899
Q ss_pred HhcCCCCCCeeeeee
Q 020848 191 LATLPTHPESVPINA 205 (320)
Q Consensus 191 l~~l~~~~~~v~~~~ 205 (320)
+.+.| ++.+.+..
T Consensus 153 l~~aG--~d~I~V~~ 165 (350)
T 3b0p_A 153 MAEAG--VKVFVVHA 165 (350)
T ss_dssp HHHTT--CCEEEEEC
T ss_pred HHHcC--CCEEEEec
Confidence 99998 67777654
No 174
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=75.32 E-value=43 Score=29.52 Aligned_cols=68 Identities=13% Similarity=0.148 Sum_probs=42.3
Q ss_pred HHHHHHcCCCEEEEecccCCCCCCc-----hhHHHHHHHHHHhh-hc------Cce-EEEeCCCCCHHHHHHHHHhccCe
Q 020848 65 AQKAKEAGSTRFCMGAAWRDTIGRK-----TNFNQILEYVKDIR-DM------GME-VCCTLGMLEKHQAIELKKAGLTA 131 (320)
Q Consensus 65 ~~~~~~~g~~~i~l~~g~~~~~ge~-----~~~~~l~~~i~~~k-~~------~~~-i~~~~g~l~~e~l~~L~~aGld~ 131 (320)
++...+.|++.|.+...+-.... | ...+++.++++.++ +. ++. +....|. ...+..|.+.|+|.
T Consensus 203 ~~~~i~aGad~i~i~D~~~~~ls-p~~f~ef~~p~~k~i~~~i~~~~~~~g~~~~p~i~~~~G~--~~~l~~l~~~g~d~ 279 (367)
T 1r3s_A 203 LVGQVVAGAQALQLFESHAGHLG-PQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAKDG--HFALEELAQAGYEV 279 (367)
T ss_dssp HHHHHHTTCSEEEEEETTGGGSC-HHHHHHHTHHHHHHHHHHHHHHHHHTTCCCCCEEEEETTC--GGGHHHHTTSSCSE
T ss_pred HHHHHHhCCCEEEEecCccccCC-HHHHHHHhHHHHHHHHHHHhhhhccccCCCCCeEEEcCCc--HHHHHHHHhcCCCE
Confidence 33445689988877544332222 3 23355666666776 54 455 3445554 56788999999998
Q ss_pred eccC
Q 020848 132 YNHN 135 (320)
Q Consensus 132 v~i~ 135 (320)
+++.
T Consensus 280 i~~d 283 (367)
T 1r3s_A 280 VGLD 283 (367)
T ss_dssp EECC
T ss_pred EEeC
Confidence 8774
No 175
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=75.26 E-value=9.6 Score=32.75 Aligned_cols=74 Identities=16% Similarity=0.219 Sum_probs=50.7
Q ss_pred HHHHHHHHHHcCCCEEEEeccc-----CC-C------------CCCchhHHHHHHHHHHhhh-cCceEEEeCCCCCHHHH
Q 020848 61 VMQAAQKAKEAGSTRFCMGAAW-----RD-T------------IGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQA 121 (320)
Q Consensus 61 i~~~~~~~~~~g~~~i~l~~g~-----~~-~------------~ge~~~~~~l~~~i~~~k~-~~~~i~~~~g~l~~e~l 121 (320)
+.+.++.+.+.|++.+.+++.. +. + .| +...+..+++++.+++ .++++..+.|..+.+.+
T Consensus 178 ~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g-~~~~~~~~~~i~~i~~~~~ipvia~GGI~~~~d~ 256 (311)
T 1ep3_A 178 IVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSG-PAIKPVALKLIHQVAQDVDIPIIGMGGVANAQDV 256 (311)
T ss_dssp SHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEES-GGGHHHHHHHHHHHHTTCSSCEEECSSCCSHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccC-ccchHHHHHHHHHHHHhcCCCEEEECCcCCHHHH
Confidence 3444566677899999885421 00 0 11 2223345677777774 47888888888899999
Q ss_pred HHHHHhccCeeccC
Q 020848 122 IELKKAGLTAYNHN 135 (320)
Q Consensus 122 ~~L~~aGld~v~i~ 135 (320)
.++.++|.|.|.++
T Consensus 257 ~~~l~~GAd~V~vg 270 (311)
T 1ep3_A 257 LEMYMAGASAVAVG 270 (311)
T ss_dssp HHHHHHTCSEEEEC
T ss_pred HHHHHcCCCEEEEC
Confidence 99999999999886
No 176
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=75.25 E-value=15 Score=33.02 Aligned_cols=98 Identities=4% Similarity=-0.083 Sum_probs=48.6
Q ss_pred hHHHHHHHHHHhhhcCce-EEEeCCCCCHHHHHHHHHhccCeeccCc-ccc--H-HHHhh------------hCCCCCHH
Q 020848 91 NFNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKAGLTAYNHNL-DTS--R-EFYSK------------IITTRSYD 153 (320)
Q Consensus 91 ~~~~l~~~i~~~k~~~~~-i~~~~g~l~~e~l~~L~~aGld~v~i~l-et~--~-~~~~~------------i~~~~~~~ 153 (320)
..++..++++.+.+.++. +.-....-+.+.+++|++. + .+.+.. |+. . +..+. +.+-....
T Consensus 220 ~~~~A~~~~~~l~~~~i~~iEeP~~~~~~~~~~~l~~~-~-~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GGit 297 (404)
T 4e5t_A 220 TVSGAKRLARRLEAYDPLWFEEPIPPEKPEDMAEVARY-T-SIPVATGERLCTKYEFSRVLETGAASILQMNLGRVGGLL 297 (404)
T ss_dssp CHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHH-C-SSCEEECTTCCHHHHHHHHHHHTCCSEECCCTTTSSCHH
T ss_pred CHHHHHHHHHHHhhcCCcEEECCCCcccHHHHHHHHhh-C-CCCEEeCCCcCCHHHHHHHHHhCCCCEEecCccccCCHH
Confidence 456667777777766654 2221122356666777664 1 122211 111 1 11111 11123577
Q ss_pred HHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcC
Q 020848 154 ERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 194 (320)
Q Consensus 154 ~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 194 (320)
..++....|...|+.+.++.. ++.=.+...+.++..+
T Consensus 298 ~~~~ia~~A~~~gi~~~~h~~----~s~i~~aa~~hlaaa~ 334 (404)
T 4e5t_A 298 EAKKIAAMAECHSAQIAPHLY----CGPLVALANIQLATCS 334 (404)
T ss_dssp HHHHHHHHHHHTTCEECCCCS----SCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCEEeecCC----CcHHHHHHHHHHHHhC
Confidence 777788888888887765532 2333344455555444
No 177
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=75.23 E-value=13 Score=34.62 Aligned_cols=70 Identities=17% Similarity=0.136 Sum_probs=49.3
Q ss_pred HHHHHHcCCCEEEEecccCCCC--------CCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 65 AQKAKEAGSTRFCMGAAWRDTI--------GRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 65 ~~~~~~~g~~~i~l~~g~~~~~--------ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
++.+.+.|++.+.+++|..... |. ..+..+.++.+.+++.++++....|..+.+.+.+...+|.+.+.++
T Consensus 286 a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~-p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GAd~V~iG 363 (496)
T 4fxs_A 286 ARALIEAGVSAVKVGIGPGSICTTRIVTGVGV-PQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVG 363 (496)
T ss_dssp HHHHHHHTCSEEEECSSCCTTBCHHHHHCCCC-CHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHhCCCEEEECCCCCcCcccccccCCCc-cHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHHHcCCCeEEec
Confidence 3445567998888753211110 11 2445566666666667899999999999999999999999998876
No 178
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=75.14 E-value=14 Score=35.56 Aligned_cols=108 Identities=7% Similarity=0.069 Sum_probs=73.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCC----CchhHHHHHHHHHHhhhcCceEE--EeCC-C--CCHHHHHHHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIG----RKTNFNQILEYVKDIRDMGMEVC--CTLG-M--LEKHQAIELKK 126 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~g----e~~~~~~l~~~i~~~k~~~~~i~--~~~g-~--l~~e~l~~L~~ 126 (320)
.+.+...+.++.+.++|+..+++-.|+..... .|..-.+|.++++.+++.|+.+. .+.+ . --++.++.+++
T Consensus 306 ~n~~~~k~yIDfAa~~G~~yvlvD~gW~~~~~~d~~~~~p~~di~~l~~Ya~~kgV~i~lw~~~~~~~~~~~~~~~~~~~ 385 (641)
T 3a24_A 306 VNNPTYKAYIDFASANGIEYVILDEGWAVNLQADLMQVVKEIDLKELVDYAASKNVGIILWAGYHAFERDMENVCRHYAE 385 (641)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEECTTSBCTTSCCTTCBCTTCCHHHHHHHHHHTTCEEEEEEEHHHHHTSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccccCCCCCccccCCcCCHHHHHHHHHhcCCEEEEEeeCcchHHHHHHHHHHHHH
Confidence 68999999999999999999998666542111 11112468888889998888753 2222 1 13568899999
Q ss_pred hccCeeccCc-ccc-HHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeee
Q 020848 127 AGLTAYNHNL-DTS-REFYSKIITTRSYDERLETLKHVREAGINVCSG 172 (320)
Q Consensus 127 aGld~v~i~l-et~-~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~ 172 (320)
.|++.|-++. +.. .+ ..+...+.++.|.+.++-|..|
T Consensus 386 ~Gv~gvK~Df~~~~~Q~---------~v~~y~~i~~~aA~~~l~V~fH 424 (641)
T 3a24_A 386 MGVKGFKVDFMDRDDQE---------MTAFNYRAAEMCAKYKLILDLH 424 (641)
T ss_dssp HTCCEEEEECCCCCSHH---------HHHHHHHHHHHHHHTTCEEEEC
T ss_pred cCCCEEEECCCCCCcHH---------HHHHHHHHHHHHHHcCCEEEcC
Confidence 9999998863 332 11 2234466777888888776654
No 179
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=74.73 E-value=7 Score=33.69 Aligned_cols=64 Identities=6% Similarity=0.025 Sum_probs=42.7
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
++||+.+. .+.|++.|.|-. ...+.+.+.++.++. .+.+.++.| ++.+.++.+.+.|+|.|+++
T Consensus 216 tl~e~~eA----l~aGaDiImLDn---------~s~~~l~~av~~~~~-~v~leaSGG-It~~~i~~~A~tGVD~IsvG 279 (300)
T 3l0g_A 216 NISQVEES----LSNNVDMILLDN---------MSISEIKKAVDIVNG-KSVLEVSGC-VNIRNVRNIALTGVDYISIG 279 (300)
T ss_dssp SHHHHHHH----HHTTCSEEEEES---------CCHHHHHHHHHHHTT-SSEEEEESS-CCTTTHHHHHTTTCSEEECG
T ss_pred CHHHHHHH----HHcCCCEEEECC---------CCHHHHHHHHHhhcC-ceEEEEECC-CCHHHHHHHHHcCCCEEEeC
Confidence 44554443 446887776631 133666666666653 355556644 78999999999999999986
No 180
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=74.65 E-value=27 Score=29.76 Aligned_cols=124 Identities=17% Similarity=0.198 Sum_probs=68.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCC------------CchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIG------------RKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIE 123 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~g------------e~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~ 123 (320)
.....+++ .+++.|+..+ +- +++.| .+..+++..++|+++++.|+.. ..-..++++.+.
T Consensus 108 ~~~g~~Le---~lk~~Gf~Gv-~N---~ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~gL~T--i~~v~~~eeA~a 178 (286)
T 2p10_A 108 MVMSTFLR---ELKEIGFAGV-QN---FPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKLDLLT--TPYVFSPEDAVA 178 (286)
T ss_dssp CCHHHHHH---HHHHHTCCEE-EE---CSCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEE--CCEECSHHHHHH
T ss_pred cCHHHHHH---HHHHhCCceE-EE---CCCcccccchhhhhHhhcCCCHHHHHHHHHHHHHCCCeE--EEecCCHHHHHH
Confidence 45667774 4556788777 31 22110 1246788999999999988752 112367999999
Q ss_pred HHHhccCeeccCcccc-HHHHhhhCCCCCHHH----HHHHHHHHHHcCCeeeeeEEEEeC--CCHHHHHHHHHHH
Q 020848 124 LKKAGLTAYNHNLDTS-REFYSKIITTRSYDE----RLETLKHVREAGINVCSGGIIGLG--EAEEDRVGLLHTL 191 (320)
Q Consensus 124 L~~aGld~v~i~let~-~~~~~~i~~~~~~~~----~l~~i~~a~~~Gi~v~~~~i~Glg--et~ed~~~~l~~l 191 (320)
+.++|.|.|.+..-.. .+..-. ....+.++ +-+..+.+++..=++ -++.+-| .+.+|+...++..
T Consensus 179 mA~agpDiI~~h~glT~gglIG~-~~avs~~~~~e~i~~i~~a~~~vnpdv--ivLc~gGpIstpeDv~~~l~~t 250 (286)
T 2p10_A 179 MAKAGADILVCHMGLTTGGAIGA-RSGKSMDDCVSLINECIEAARTIRDDI--IILSHGGPIANPEDARFILDSC 250 (286)
T ss_dssp HHHHTCSEEEEECSCC----------CCCHHHHHHHHHHHHHHHHHHCSCC--EEEEESTTCCSHHHHHHHHHHC
T ss_pred HHHcCCCEEEECCCCCCCCcccC-CCcccHHHhHHHHHHHHHHHHHhCCCc--EEEecCCCCCCHHHHHHHHhcC
Confidence 9999999987644311 111111 11234444 333333344432222 2222222 6888988888653
No 181
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=74.60 E-value=25 Score=28.94 Aligned_cols=73 Identities=15% Similarity=0.207 Sum_probs=44.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCC---------CCCCchhHHHHHHHHHHhhhcC--ceEEEeCCCCCHHHHHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRD---------TIGRKTNFNQILEYVKDIRDMG--MEVCCTLGMLEKHQAIEL 124 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~---------~~ge~~~~~~l~~~i~~~k~~~--~~i~~~~g~l~~e~l~~L 124 (320)
++.|++....+...+.|.+-|.-.+|..+ ++| ...+++.-+-+.++..+ +.+-.+.|..+.+.+..+
T Consensus 125 Lt~eei~~a~~ia~eaGADfVKTSTGf~~~~~~~~~~~~~g--At~~dv~lm~~~i~~~g~~v~vKaaGGirt~~~al~~ 202 (226)
T 1vcv_A 125 LRDEERYTLYDIIAEAGAHFIKSSTGFAEEAYAARQGNPVH--STPERAAAIARYIKEKGYRLGVKMAGGIRTREQAKAI 202 (226)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECCCSCCCHHHHHHTTCCSS--CCHHHHHHHHHHHHHHTCCCEEEEESSCCSHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCccccccccCCCCC--CCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHH
Confidence 57788888778778888877766554320 122 23334333333333333 566677787778888878
Q ss_pred HHh---ccC
Q 020848 125 KKA---GLT 130 (320)
Q Consensus 125 ~~a---Gld 130 (320)
.++ |.+
T Consensus 203 i~a~~~Ga~ 211 (226)
T 1vcv_A 203 VDAIGWGED 211 (226)
T ss_dssp HHHHCSCSC
T ss_pred HHHHHCCCC
Confidence 788 877
No 182
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=74.55 E-value=15 Score=31.95 Aligned_cols=58 Identities=14% Similarity=0.062 Sum_probs=39.4
Q ss_pred HHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 67 KAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 67 ~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
++.+.|++.|.|-. . ..+.+-+.++.++. .+.+.++.| ++.+.++.+.+.|+|.++++
T Consensus 246 eAl~aGaD~I~LDn------~---~~~~l~~av~~l~~-~v~ieaSGG-It~~~I~~~a~tGVD~isvG 303 (320)
T 3paj_A 246 EAISAGADIIMLDN------F---SLEMMREAVKINAG-RAALENSGN-ITLDNLKECAETGVDYISVG 303 (320)
T ss_dssp HHHHTTCSEEEEES------C---CHHHHHHHHHHHTT-SSEEEEESS-CCHHHHHHHHTTTCSEEECT
T ss_pred HHHHcCCCEEEECC------C---CHHHHHHHHHHhCC-CCeEEEECC-CCHHHHHHHHHcCCCEEEEC
Confidence 33446887776632 1 23556666655542 455666655 88999999999999999886
No 183
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=74.47 E-value=44 Score=29.29 Aligned_cols=69 Identities=10% Similarity=0.160 Sum_probs=42.5
Q ss_pred HHHHHHHcCCCEEEEecccCCCCCCch-----hHHHHHHHHHHhhhcCce-EEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 64 AAQKAKEAGSTRFCMGAAWRDTIGRKT-----NFNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 64 ~~~~~~~~g~~~i~l~~g~~~~~ge~~-----~~~~l~~~i~~~k~~~~~-i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
.++...+.|++.|.+...+..... |. ..+.+.++++.+++.+.. +....|. ...+..|.+.|+|.+++.
T Consensus 198 ~~~~~~~aGad~i~i~D~~~~~ls-p~~f~ef~~p~~~~i~~~i~~~g~~~i~~~~G~--~~~l~~l~~~g~d~~~~d 272 (359)
T 2inf_A 198 YVKAQIKAGAKAIQIFDSWVGALN-QADYRTYIKPVMNRIFSELAKENVPLIMFGVGA--SHLAGDWHDLPLDVVGLD 272 (359)
T ss_dssp HHHHHHHTTCSEEEEECTTGGGSC-HHHHHHHTHHHHHHHHHHHGGGCSCEEEECTTC--GGGHHHHHTSSCSEEECC
T ss_pred HHHHHHHhCCCEEEEeCCccccCC-HHHHHHHhHHHHHHHHHHHHHcCCcEEEEcCCc--HHHHHHHHHhCCCEEEeC
Confidence 334455789988887543322222 22 235566666667755665 3445555 557888999999988764
No 184
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=74.31 E-value=14 Score=32.65 Aligned_cols=41 Identities=24% Similarity=0.315 Sum_probs=27.7
Q ss_pred CHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcC
Q 020848 151 SYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 194 (320)
Q Consensus 151 ~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 194 (320)
.....++....+++.|+.+.++.+ .++.=.+...+.++..+
T Consensus 275 Git~~~~i~~~A~~~g~~~~~~~~---~es~i~~aa~~hlaaa~ 315 (370)
T 1nu5_A 275 GIANTLKVAAVAEAAGISSYGGTM---LDSTVGTAAALHVYATL 315 (370)
T ss_dssp SHHHHHHHHHHHHHHTCEEEECCS---SCCHHHHHHHHHHHTTS
T ss_pred CHHHHHHHHHHHHHcCCcEEecCC---cchHHHHHHHHHHHhcC
Confidence 577778888889999988754432 45655556666666554
No 185
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=74.01 E-value=38 Score=31.39 Aligned_cols=123 Identities=16% Similarity=0.206 Sum_probs=72.3
Q ss_pred HHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhc--CceEEEeCCCCCHHHHHHHHHhccCeeccCcccc
Q 020848 62 MQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTS 139 (320)
Q Consensus 62 ~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~--~~~i~~~~g~l~~e~l~~L~~aGld~v~i~let~ 139 (320)
.+.++.+.+.|++.+.+.+.. + ..+.+.+.++.+++. ++.+... +..+.+.++.|.++|+|.|.++.-..
T Consensus 233 ~~~a~~l~~aG~d~I~id~a~----g---~~~~~~~~i~~ir~~~p~~~Vi~g-~v~t~e~a~~l~~aGaD~I~Vg~g~G 304 (496)
T 4fxs_A 233 EERVKALVEAGVDVLLIDSSH----G---HSEGVLQRIRETRAAYPHLEIIGG-NVATAEGARALIEAGVSAVKVGIGPG 304 (496)
T ss_dssp HHHHHHHHHTTCSEEEEECSC----T---TSHHHHHHHHHHHHHCTTCCEEEE-EECSHHHHHHHHHHTCSEEEECSSCC
T ss_pred HHHHHHHHhccCceEEecccc----c---cchHHHHHHHHHHHHCCCceEEEc-ccCcHHHHHHHHHhCCCEEEECCCCC
Confidence 455666677899988886532 2 225677888888743 5555442 24778999999999999998752111
Q ss_pred ----HHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeC-CCHHHHHHHHHHHhcCCCCCCeeee
Q 020848 140 ----REFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLG-EAEEDRVGLLHTLATLPTHPESVPI 203 (320)
Q Consensus 140 ----~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glg-et~ed~~~~l~~l~~l~~~~~~v~~ 203 (320)
.+..... ....+..+.+..+.+++.++++ +..=| .+.+|+.+.+. +| .+.+.+
T Consensus 305 s~~~tr~~~g~-g~p~~~~i~~v~~~~~~~~iPV----Ia~GGI~~~~di~kala----~G--Ad~V~i 362 (496)
T 4fxs_A 305 SICTTRIVTGV-GVPQITAIADAAGVANEYGIPV----IADGGIRFSGDISKAIA----AG--ASCVMV 362 (496)
T ss_dssp TTBCHHHHHCC-CCCHHHHHHHHHHHHGGGTCCE----EEESCCCSHHHHHHHHH----TT--CSEEEE
T ss_pred cCcccccccCC-CccHHHHHHHHHHHhccCCCeE----EEeCCCCCHHHHHHHHH----cC--CCeEEe
Confidence 1222221 1224555555555565666553 33112 37778777654 45 454444
No 186
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=74.01 E-value=10 Score=34.03 Aligned_cols=99 Identities=8% Similarity=0.034 Sum_probs=53.1
Q ss_pred hHHHHHHHHHHhhhcCceE-EEeCCCCCHHHHHHHHHhccCeeccC-cccc--H-HHHhhh------------CCCCCHH
Q 020848 91 NFNQILEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKAGLTAYNHN-LDTS--R-EFYSKI------------ITTRSYD 153 (320)
Q Consensus 91 ~~~~l~~~i~~~k~~~~~i-~~~~g~l~~e~l~~L~~aGld~v~i~-let~--~-~~~~~i------------~~~~~~~ 153 (320)
..++..++++.+.+.++.. .-....-+.+.+++|++. + .+.+. -|+. + +..+.+ .+-....
T Consensus 211 ~~~~a~~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~-~-~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 288 (392)
T 2poz_A 211 TTDETIRFCRKIGELDICFVEEPCDPFDNGALKVISEQ-I-PLPIAVGERVYTRFGFRKIFELQACGIIQPDIGTAGGLM 288 (392)
T ss_dssp CHHHHHHHHHHHGGGCEEEEECCSCTTCHHHHHHHHHH-C-SSCEEECTTCCHHHHHHHHHTTTCCSEECCCTTTSSCHH
T ss_pred CHHHHHHHHHHHHhcCCCEEECCCCcccHHHHHHHHhh-C-CCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHH
Confidence 4566777777777666652 222222356677777765 1 22332 1221 1 222212 1123688
Q ss_pred HHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 154 ERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 154 ~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
..++.++.|++.|+.+.++.+. +.=-+...+.++..++
T Consensus 289 ~~~~i~~~A~~~g~~~~~h~~~----s~i~~aa~~hlaaa~~ 326 (392)
T 2poz_A 289 ETKKICAMAEAYNMRVAPHVCG----SSLIETATLQLEANIT 326 (392)
T ss_dssp HHHHHHHHHHTTTCEECCCCCS----SHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHcCCeEecCCCC----CHHHHHHHHHHHHhCC
Confidence 8889999999999987665432 3333444555555553
No 187
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=73.99 E-value=19 Score=31.95 Aligned_cols=74 Identities=8% Similarity=-0.023 Sum_probs=46.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHhc-cCeec
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAG-LTAYN 133 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~aG-ld~v~ 133 (320)
.+.++..+.++.+.+.|+..+.+.++... +.+... .++++.+| ..++++..+.|. +.+.++++.+.| +|.|.
T Consensus 247 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~--~~~~~~---~~~~~~i~~~~~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~ 320 (365)
T 2gou_A 247 DPILTYTAAAALLNKHRIVYLHIAEVDWD--DAPDTP---VSFKRALREAYQGVLIYAGRY-NAEKAEQAINDGLADMIG 320 (365)
T ss_dssp SHHHHHHHHHHHHHHTTCSEEEEECCBTT--BCCCCC---HHHHHHHHHHCCSEEEEESSC-CHHHHHHHHHTTSCSEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCcC--CCCCcc---HHHHHHHHHHCCCcEEEeCCC-CHHHHHHHHHCCCcceeh
Confidence 35677777777777788888777654211 111110 13455555 346676666665 778888877777 78777
Q ss_pred cC
Q 020848 134 HN 135 (320)
Q Consensus 134 i~ 135 (320)
++
T Consensus 321 ig 322 (365)
T 2gou_A 321 FG 322 (365)
T ss_dssp CC
T ss_pred hc
Confidence 75
No 188
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=73.80 E-value=8.4 Score=33.03 Aligned_cols=59 Identities=10% Similarity=0.007 Sum_probs=40.2
Q ss_pred HHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhc--CceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 67 KAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 67 ~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~--~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
++.+.|++.+.+-. ...+.+.+.++.++.. ++.+.++.| ++.+.++.+.+.|+|.|.++
T Consensus 209 eal~aGaD~I~LDn---------~~~~~~~~~v~~l~~~~~~v~ieaSGG-It~~~i~~~a~tGVD~isvG 269 (284)
T 1qpo_A 209 AVLPEKPELILLDN---------FAVWQTQTAVQRRDSRAPTVMLESSGG-LSLQTAATYAETGVDYLAVG 269 (284)
T ss_dssp HHGGGCCSEEEEET---------CCHHHHHHHHHHHHHHCTTCEEEEESS-CCTTTHHHHHHTTCSEEECG
T ss_pred HHHHcCCCEEEECC---------CCHHHHHHHHHHhhccCCCeEEEEECC-CCHHHHHHHHhcCCCEEEEC
Confidence 33446887665531 1235566666666643 456666655 78999999999999999886
No 189
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=73.75 E-value=20 Score=30.68 Aligned_cols=34 Identities=18% Similarity=0.176 Sum_probs=17.2
Q ss_pred hHHHHHHHHHHhhhcCce---EEEeCCCCCHHHHHHH
Q 020848 91 NFNQILEYVKDIRDMGME---VCCTLGMLEKHQAIEL 124 (320)
Q Consensus 91 ~~~~l~~~i~~~k~~~~~---i~~~~g~l~~e~l~~L 124 (320)
..+++.++++.+.+.|.. +.-|.|.++++.+.+|
T Consensus 154 ~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~l 190 (298)
T 2cw6_A 154 SPAKVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDM 190 (298)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEecCCCCCcCHHHHHHH
Confidence 345555555555555433 3344555555554444
No 190
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}
Probab=73.74 E-value=8.8 Score=34.61 Aligned_cols=81 Identities=20% Similarity=0.367 Sum_probs=55.8
Q ss_pred CCHHHHHHHHHHHHH-----cCCCEEEEecccCC----CCCC----chhHHH-HHHHHHHhhhcCce--EEEeCCC----
Q 020848 56 MTKDAVMQAAQKAKE-----AGSTRFCMGAAWRD----TIGR----KTNFNQ-ILEYVKDIRDMGME--VCCTLGM---- 115 (320)
Q Consensus 56 ~s~eei~~~~~~~~~-----~g~~~i~l~~g~~~----~~ge----~~~~~~-l~~~i~~~k~~~~~--i~~~~g~---- 115 (320)
.+.+.+++.++.+.+ .|++.|.|=.|+.. ..|. |..++. +-.+++++++.|+. +...+|.
T Consensus 23 ~~e~~i~~~ad~~~~~gl~~~G~~~~~iDdgW~~~~r~~~G~~~~~~~kFP~Gl~~l~~~i~~~Glk~Giw~~pg~~tc~ 102 (397)
T 3a5v_A 23 VDEQLILDAAKAIASSGLKDLGYNYVIIDDCWQKNERESSKTLLADPTKFPRGIKPLVDDIHNLGLKAGIYSSAGTLTCG 102 (397)
T ss_dssp CCHHHHHHHHHHHHHHTHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTTCHHHHHHHHHHTTCEEEEEEESSSBCTT
T ss_pred CCHHHHHHHHHHHHHcCCcccCceEEEECCCcCCCCCCCCCCeEEChhcCCcCHHHHHHHHHHcCCEEEEEecCCCCccC
Confidence 678899999998877 78988888555433 2221 222443 77777888877776 3444442
Q ss_pred -------CCHHHHHHHHHhccCeeccCc
Q 020848 116 -------LEKHQAIELKKAGLTAYNHNL 136 (320)
Q Consensus 116 -------l~~e~l~~L~~aGld~v~i~l 136 (320)
.....++.+++.|+|.|-++.
T Consensus 103 ~~pg~~~~~~~~~~~~~~wGvdyvK~D~ 130 (397)
T 3a5v_A 103 GHIASLGYEDIDAKTWAKWGIDYLKYDN 130 (397)
T ss_dssp SCBCCTTCHHHHHHHHHHHTCCEEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHcCCCEEEECC
Confidence 456678899999999988753
No 191
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=73.52 E-value=40 Score=28.33 Aligned_cols=204 Identities=15% Similarity=0.175 Sum_probs=108.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCCCC--C-CchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeec
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTI--G-RKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYN 133 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l~~g~~~~~--g-e~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~ 133 (320)
++|..++.++.+++.|+.-+.++.-...+. + .....+.+..+.+..++.|+++.++. ++.+.++.+.+. +|.+.
T Consensus 35 ~~e~a~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~Gl~~~te~--~d~~~~~~l~~~-vd~~k 111 (262)
T 1zco_A 35 SREQIMKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEYGLVTVTEV--MDTRHVELVAKY-SDILQ 111 (262)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEEEC--CCGGGHHHHHHH-CSEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHcCCcEEEee--CCHHhHHHHHhh-CCEEE
Confidence 688999999999999998777765321110 0 00124444444444457799876654 666778888888 89988
Q ss_pred cCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeeee--eeecCC
Q 020848 134 HNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINA--LLAVKG 211 (320)
Q Consensus 134 i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~--~~p~~g 211 (320)
|+--+. .++ ..++.+.+.|.++.+ =-|..-+.+++.+.++.+..-| ...+.+.. +...++
T Consensus 112 Iga~~~----------~n~----~ll~~~a~~~kPV~l--k~G~~~t~~e~~~Av~~i~~~G--n~~i~L~~RG~~~~~~ 173 (262)
T 1zco_A 112 IGARNS----------QNF----ELLKEVGKVENPVLL--KRGMGNTIQELLYSAEYIMAQG--NENVILCERGIRTFET 173 (262)
T ss_dssp ECGGGT----------TCH----HHHHHHTTSSSCEEE--ECCTTCCHHHHHHHHHHHHTTT--CCCEEEEECCBCCSCC
T ss_pred ECcccc----------cCH----HHHHHHHhcCCcEEE--ecCCCCCHHHHHHHHHHHHHCC--CCeEEEEECCCCCCCC
Confidence 864221 111 223444445555422 1222237999999999999887 33343322 001111
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhCCCceeec---CCcccccChhHHHHHHHcCCceEeeCCcc-----ccCCC---CCh
Q 020848 212 TPLQDQKPVEIWEMIRMIATARIVMPKAMVRL---SAGRVRFSMPEQALCFLAGANSIFTGEKL-----LTTPN---NDF 280 (320)
Q Consensus 212 t~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~---~~g~~~~~~~~~~~~~~~Gan~~~~~~~~-----~~~~~---~~~ 280 (320)
. ....++. +.+..++..+.-..+-. +.|...+.+.....+...||+.++....+ +. ++ .++
T Consensus 174 y---~~~~v~L----~ai~~lk~~~~~pVi~d~sH~~g~~~~v~~~~~aAva~Ga~Gl~iE~H~~~d~al~-D~~~sl~p 245 (262)
T 1zco_A 174 A---TRFTLDI----SAVPVVKELSHLPIIVDPSHPAGRRSLVIPLAKAAYAIGADGIMVEVHPEPEKALS-DSQQQLTF 245 (262)
T ss_dssp S---SSSBCCT----THHHHHHHHBSSCEEECSSTTTCSGGGHHHHHHHHHHTTCSEEEEEBCSSGGGCSS-CTTTCBCH
T ss_pred c---ChhhcCH----HHHHHHHhhhCCCEEEEcCCCCCccchHHHHHHHHHHcCCCEEEEEecCCccccCC-hhhcCCCH
Confidence 1 1112221 22233333322112121 12222222344455778899988776432 11 32 357
Q ss_pred hHHHHHHHH
Q 020848 281 DADQLMFKV 289 (320)
Q Consensus 281 ~~~~~~i~~ 289 (320)
++..+|+++
T Consensus 246 ~~~~~l~~~ 254 (262)
T 1zco_A 246 DDFLQLLKE 254 (262)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777777654
No 192
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=73.42 E-value=37 Score=31.31 Aligned_cols=72 Identities=19% Similarity=0.250 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhc--CceEEEeCCCCCHHHHHHHHHhccCeeccCc
Q 020848 59 DAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTLGMLEKHQAIELKKAGLTAYNHNL 136 (320)
Q Consensus 59 eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~--~~~i~~~~g~l~~e~l~~L~~aGld~v~i~l 136 (320)
++..+.++.+.+.|++.+.+... .|. ....++.++.+++. ++++..- +..+.+.++.|.++|+|.|.++.
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i~~~----~G~---~~~~~e~i~~i~~~~p~~pvi~g-~~~t~e~a~~l~~~G~d~I~v~~ 307 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVIDTA----HGH---SRRVIETLEMIKADYPDLPVVAG-NVATPEGTEALIKAGADAVKVGV 307 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCS----CCS---SHHHHHHHHHHHHHCTTSCEEEE-EECSHHHHHHHHHTTCSEEEECS
T ss_pred HhHHHHHHHHHHhCCCEEEEEec----CCc---hHHHHHHHHHHHHHCCCceEEeC-CcCCHHHHHHHHHcCCCEEEEcC
Confidence 44566777788899999887432 132 24566777777743 5665443 34788999999999999998876
Q ss_pred cc
Q 020848 137 DT 138 (320)
Q Consensus 137 et 138 (320)
..
T Consensus 308 ~~ 309 (494)
T 1vrd_A 308 GP 309 (494)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 193
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=73.39 E-value=14 Score=32.97 Aligned_cols=22 Identities=14% Similarity=0.163 Sum_probs=18.2
Q ss_pred CHHHHHHHHHHHHHcCCeeeee
Q 020848 151 SYDERLETLKHVREAGINVCSG 172 (320)
Q Consensus 151 ~~~~~l~~i~~a~~~Gi~v~~~ 172 (320)
.....++.++.|++.|+.+.++
T Consensus 288 Git~~~~i~~~A~~~g~~~~~~ 309 (382)
T 1rvk_A 288 GITPALKTMHLAEAFGMECEVH 309 (382)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEC
T ss_pred CHHHHHHHHHHHHHcCCeEeec
Confidence 5777788888999999987777
No 194
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=73.33 E-value=10 Score=34.44 Aligned_cols=114 Identities=8% Similarity=0.108 Sum_probs=69.3
Q ss_pred CCHHHHHHHHHH-HHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeCCCCC-HHHHHHHHHhc-cCee
Q 020848 56 MTKDAVMQAAQK-AKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLE-KHQAIELKKAG-LTAY 132 (320)
Q Consensus 56 ~s~eei~~~~~~-~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~-~e~l~~L~~aG-ld~v 132 (320)
+++++.++.++. +.+.++.-| ..+.. +..++.+.++-+.+. ..+++....-..+ .+.++.+.+.| +|.+
T Consensus 261 ~t~~eai~~~~~ll~~y~i~~I------EdPl~-~dD~e~~~~L~~~~g-~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i 332 (417)
T 3qn3_A 261 FSSEALIERYVELCAKYPICSI------EDGLA-ENDFEGWIKLTEKLG-NKIQLVGDDLFVTNEDILREGIIKKMANAV 332 (417)
T ss_dssp ECHHHHHHHHHHHHHHSCEEEE------ESSSC-TTCHHHHHHHHHHHT-TTSEEEESTTTTTCHHHHHHHHHHTCCSEE
T ss_pred cCHHHHHHHHHHHHhhcceeEE------ecCCC-cccHHHHHHHHHhhC-CCCceecCCcccCCHHHHHHHHHhCCCCEE
Confidence 689999998887 566653222 22222 123333333332221 1366655444455 88888887765 6777
Q ss_pred ccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEe--CCCHHHHHHHHHHH
Q 020848 133 NHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL--GEAEEDRVGLLHTL 191 (320)
Q Consensus 133 ~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl--get~ed~~~~l~~l 191 (320)
.+.+ .+-....+.++.++.++..|+.+ ++|+ |||.+.....+...
T Consensus 333 ~iKv----------~qiGGiTea~kia~lA~~~G~~v----~vsh~sgEt~d~~iadlava 379 (417)
T 3qn3_A 333 LIKP----------NQIGTITQTMRTVRLAQRNNYKC----VMSHRSGESEDAFIADFAVA 379 (417)
T ss_dssp EECH----------HHHCSHHHHHHHHHHHHHTTCEE----EEECCSSCCSCCHHHHHHHH
T ss_pred EecC----------CCCCCHHHHHHHHHHHHHcCCeE----EEeCCCCCchHHHHHHHHHH
Confidence 7754 22356777889999999999876 5555 78877666555443
No 195
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=73.17 E-value=15 Score=33.19 Aligned_cols=99 Identities=5% Similarity=-0.061 Sum_probs=50.4
Q ss_pred hhHHHHHHHHHHhhhcCce-EEEeCCCCCHHHHHHHHHhccCeeccCc-ccc--H-HHHhhh------------CCCCCH
Q 020848 90 TNFNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKAGLTAYNHNL-DTS--R-EFYSKI------------ITTRSY 152 (320)
Q Consensus 90 ~~~~~l~~~i~~~k~~~~~-i~~~~g~l~~e~l~~L~~aGld~v~i~l-et~--~-~~~~~i------------~~~~~~ 152 (320)
...++..++++.+.+.++. +.-....-+.+.+++|++. + .+.+.. |+. . +..+.+ .+-...
T Consensus 212 ~~~~~A~~~~~~L~~~~i~~iEeP~~~~d~~~~~~l~~~-~-~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GGi 289 (412)
T 4e4u_A 212 MVPSSAIRLAKRLEKYDPLWFEEPVPPGQEEAIAQVAKH-T-SIPIATGERLTTKYEFHKLLQAGGASILQLNVARVGGL 289 (412)
T ss_dssp BCHHHHHHHHHHHGGGCCSEEECCSCSSCHHHHHHHHHT-C-SSCEEECTTCCHHHHHHHHHHTTCCSEECCCTTTTTSH
T ss_pred CCHHHHHHHHHHhhhcCCcEEECCCChhhHHHHHHHHhh-C-CCCEEecCccCCHHHHHHHHHcCCCCEEEeCccccCCH
Confidence 3456677777777766654 2221122356667777664 1 222221 111 1 111111 112357
Q ss_pred HHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcC
Q 020848 153 DERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 194 (320)
Q Consensus 153 ~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 194 (320)
...++....|...|+.+.++.. ++.=.+...+.+...+
T Consensus 290 t~~~kia~~A~~~gi~v~~h~~----~s~i~~aa~~hlaaa~ 327 (412)
T 4e4u_A 290 LEAKKIATLAEVHYAQIAPHLY----NGPVGAAASIQLATCT 327 (412)
T ss_dssp HHHHHHHHHHHHTTCEECCCCC----SCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCEEEecCC----CcHHHHHHHHHHHHhC
Confidence 7778888888888888766632 2333344455555444
No 196
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=73.17 E-value=11 Score=32.55 Aligned_cols=56 Identities=16% Similarity=0.180 Sum_probs=38.3
Q ss_pred HHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 69 KEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 69 ~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
.+.|++.|.+.. ...+++.++++.+.. .+.+.++.|. +.+.+..+.+.|+|.+.++
T Consensus 225 ~~aGaD~I~ld~---------~~~e~l~~~v~~~~~-~~~I~ASGGI-t~~~i~~~a~~GvD~isvG 280 (296)
T 1qap_A 225 LKAGADIIMLDN---------FNTDQMREAVKRVNG-QARLEVSGNV-TAETLREFAETGVDFISVG 280 (296)
T ss_dssp HHTTCSEEEESS---------CCHHHHHHHHHTTCT-TCCEEECCCS-CHHHHHHHHHTTCSEEECS
T ss_pred HHcCCCEEEECC---------CCHHHHHHHHHHhCC-CCeEEEECCC-CHHHHHHHHHcCCCEEEEe
Confidence 456777776632 233555555554432 3567777775 9999999999999999886
No 197
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=73.14 E-value=20 Score=32.16 Aligned_cols=70 Identities=17% Similarity=0.166 Sum_probs=47.0
Q ss_pred HHHHHHcCCCEEEEecc-cCCCCCCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 65 AQKAKEAGSTRFCMGAA-WRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 65 ~~~~~~~g~~~i~l~~g-~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
++.+.+.|++.|.+.+. ++...+.+..++-+.++.+.++. .+++..+.|..+.+.+.+...+|.|.|.++
T Consensus 266 A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~-~ipVia~GGI~~g~Dv~kalalGAd~V~iG 336 (392)
T 2nzl_A 266 AREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEG-KVEVFLDGGVRKGTDVLKALALGAKAVFVG 336 (392)
T ss_dssp HHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTT-SSEEEECSSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCC-CCEEEEECCCCCHHHHHHHHHhCCCeeEEC
Confidence 45566789999988542 22222224445555555444432 488889999988888777778999999886
No 198
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=72.98 E-value=45 Score=28.71 Aligned_cols=169 Identities=11% Similarity=0.023 Sum_probs=99.0
Q ss_pred CCCCHHHHHHHHHhccCeeccCcccc-HHHHhhhCC-CCCHHHHHHHHHHHHHc--CCeeeeeEEEEeCCCHHHHHHHHH
Q 020848 114 GMLEKHQAIELKKAGLTAYNHNLDTS-REFYSKIIT-TRSYDERLETLKHVREA--GINVCSGGIIGLGEAEEDRVGLLH 189 (320)
Q Consensus 114 g~l~~e~l~~L~~aGld~v~i~let~-~~~~~~i~~-~~~~~~~l~~i~~a~~~--Gi~v~~~~i~Glget~ed~~~~l~ 189 (320)
+..+.-..+.+.++|++.+.++=.+. ...+-.-.. .-++++.+...+...+. .+++.+++-.|.| +.+++.+.++
T Consensus 24 ~a~D~~sA~l~e~aGf~ai~vsG~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~~PviaD~d~Gyg-~~~~v~~tv~ 102 (302)
T 3fa4_A 24 GVYDGLSARVALSAGFDALYMTGAGTAASVHGQADLGICTLNDMRANAEMISNISPSTPVIADADTGYG-GPIMVARTTE 102 (302)
T ss_dssp EECSHHHHHHHHTTTCSCEEECHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHTTSTTSCEEEECTTTTS-SHHHHHHHHH
T ss_pred cCcCHHHHHHHHHcCCCEEEeCcHHHHHHHcCCCCCCcCCHHHHHHHHHHHHhhccCCCEEEECCCCCC-CHHHHHHHHH
Confidence 44667778888889999988853333 222221111 24788888888877663 5678888877876 5778899999
Q ss_pred HHhcCCCCCCeeeeeeee-ecCCCCCCCCCCCCHHHHHHHHHHHHHh----CCCceeecCCc-c--cccChh--HHHHHH
Q 020848 190 TLATLPTHPESVPINALL-AVKGTPLQDQKPVEIWEMIRMIATARIV----MPKAMVRLSAG-R--VRFSMP--EQALCF 259 (320)
Q Consensus 190 ~l~~l~~~~~~v~~~~~~-p~~gt~~~~~~~~~~~e~~~~~a~~R~~----~p~~~i~~~~g-~--~~~~~~--~~~~~~ 259 (320)
.+.+.| ..-+.+---. |.....+...+..+.++....+..++.. -++..|..-+. . .++... ......
T Consensus 103 ~l~~aG--aagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ay~ 180 (302)
T 3fa4_A 103 QYSRSG--VAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQTHGYEESVARLRAAR 180 (302)
T ss_dssp HHHHTT--CCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECCHHHHCHHHHHHHHHHHH
T ss_pred HHHHcC--CcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEecccccCCHHHHHHHHHHHH
Confidence 888887 5666663322 2221122234557788888777766543 34544433211 1 112111 112345
Q ss_pred HcCCceEeeCCccccCCCCChhHHHHHHHHcC
Q 020848 260 LAGANSIFTGEKLLTTPNNDFDADQLMFKVLG 291 (320)
Q Consensus 260 ~~Gan~~~~~~~~~~~~~~~~~~~~~~i~~~G 291 (320)
.+||+.+|+.. -.+.+++.++.++.+
T Consensus 181 eAGAD~ifi~g------~~~~~ei~~~~~~~~ 206 (302)
T 3fa4_A 181 DAGADVGFLEG------ITSREMARQVIQDLA 206 (302)
T ss_dssp TTTCSEEEETT------CCCHHHHHHHHHHTT
T ss_pred HcCCCEEeecC------CCCHHHHHHHHHHhc
Confidence 68999997753 135666666666653
No 199
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=72.97 E-value=11 Score=33.88 Aligned_cols=23 Identities=13% Similarity=0.063 Sum_probs=18.0
Q ss_pred CHHHHHHHHHHHHHcCCeeeeeE
Q 020848 151 SYDERLETLKHVREAGINVCSGG 173 (320)
Q Consensus 151 ~~~~~l~~i~~a~~~Gi~v~~~~ 173 (320)
.+...++.++.|++.|+.+.++.
T Consensus 294 Git~~~~i~~~A~~~gi~~~~h~ 316 (393)
T 2og9_A 294 GITPFLKIASLAEHAGLMLAPHF 316 (393)
T ss_dssp SHHHHHHHHHHHHHTTCEECCCS
T ss_pred CHHHHHHHHHHHHHcCCEEeccC
Confidence 56777888899999999876553
No 200
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=72.71 E-value=17 Score=31.18 Aligned_cols=64 Identities=14% Similarity=0.175 Sum_probs=40.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
+.+|+.+ +.+.|++.+.+.. ...+.+.+.++.++. .+++..+.| ++.+.+..+.+.|+|.|.++
T Consensus 205 t~eea~e----A~~aGaD~I~ld~---------~~~~~~k~av~~v~~-~ipi~AsGG-It~eni~~~a~tGvD~IsVg 268 (286)
T 1x1o_A 205 SLEELEE----ALEAGADLILLDN---------FPLEALREAVRRVGG-RVPLEASGN-MTLERAKAAAEAGVDYVSVG 268 (286)
T ss_dssp SHHHHHH----HHHHTCSEEEEES---------CCHHHHHHHHHHHTT-SSCEEEESS-CCHHHHHHHHHHTCSEEECT
T ss_pred CHHHHHH----HHHcCCCEEEECC---------CCHHHHHHHHHHhCC-CCeEEEEcC-CCHHHHHHHHHcCCCEEEEc
Confidence 4455443 3446887776642 122344455555542 355656544 78999999999999999885
No 201
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=72.67 E-value=8 Score=34.77 Aligned_cols=42 Identities=19% Similarity=0.124 Sum_probs=26.3
Q ss_pred CCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcC
Q 020848 150 RSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 194 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 194 (320)
..+...++.++.+++.|+.+.++.++ ++.=-+...+.++..+
T Consensus 275 GGit~~~~i~~~A~~~g~~~~~~~~~---es~ig~aa~~hlaa~~ 316 (397)
T 2qde_A 275 GGLLKAQRWLTLARLANLPVICGCMV---GSGLEASPAAHLLAAN 316 (397)
T ss_dssp TSHHHHHHHHHHHHHHTCCEEECCCS---CCHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHcCCeEEEecCc---ccHHHHHHHHHHHHhC
Confidence 35777788888899999887666443 3433344444444434
No 202
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=72.63 E-value=12 Score=33.65 Aligned_cols=127 Identities=10% Similarity=0.042 Sum_probs=64.3
Q ss_pred CHHHHHHHHHHHHHc-CCC-EEEEecccCCCCCCch-hHHHHHHHHHHhhhcCce-EEEeCCCCCHHHHHHHHHhccCee
Q 020848 57 TKDAVMQAAQKAKEA-GST-RFCMGAAWRDTIGRKT-NFNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKAGLTAY 132 (320)
Q Consensus 57 s~eei~~~~~~~~~~-g~~-~i~l~~g~~~~~ge~~-~~~~l~~~i~~~k~~~~~-i~~~~g~l~~e~l~~L~~aGld~v 132 (320)
++++-++.++.+++. |-. .+.+ .. + + .. ..++..++++.+.+.++. +.-....-+.+.+++|++. + .+
T Consensus 187 ~~~~d~e~v~avR~a~G~d~~l~v-Da-N---~-~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~d~~~~~~l~~~-~-~i 258 (394)
T 3mkc_A 187 STKEVAYYLRELRGILGHDTDMMV-DY-L---Y-RFTDWYEVARLLNSIEDLELYFAEATLQHDDLSGHAKLVEN-T-RS 258 (394)
T ss_dssp CHHHHHHHHHHHHHHHCSSSEEEE-EC-T---T-CCCCHHHHHHHHHHTGGGCCSEEESCSCTTCHHHHHHHHHH-C-SS
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEE-eC-C---C-CCCCHHHHHHHHHHhhhcCCeEEECCCCchhHHHHHHHHhh-C-CC
Confidence 466666666666553 433 2322 21 1 1 13 456677777777766654 2222222355666777664 1 12
Q ss_pred ccC----ccccHHHHhhhC------------CCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 133 NHN----LDTSREFYSKII------------TTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 133 ~i~----let~~~~~~~i~------------~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
.+. +.+..+..+.+. +-......++....+...|+.+..+.+ ++.=.....+.++..++
T Consensus 259 PIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~----~s~i~~aa~~hlaaa~p 333 (394)
T 3mkc_A 259 RICGAEMSTTRFEAEEWITKGKVHLLQSDYNRCGGLTELRRITEMATANNVQVMPHNW----KTGITSAAAIHYQFAVG 333 (394)
T ss_dssp CBEECTTCCHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEECCCCC----SCHHHHHHHHHHHHHTC
T ss_pred CEEeCCCCCCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHHcCCEEeecCC----CcHHHHHHHHHHHHhCC
Confidence 322 111111111111 113477788888889999998766643 34334445555554443
No 203
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=72.53 E-value=31 Score=30.32 Aligned_cols=57 Identities=16% Similarity=0.077 Sum_probs=35.2
Q ss_pred HHHHHHHHhccCeeccCcccc-HHHHhh-h----CCCCCHHHHHHHHHHHHHcCCeeeeeEEE
Q 020848 119 HQAIELKKAGLTAYNHNLDTS-REFYSK-I----ITTRSYDERLETLKHVREAGINVCSGGII 175 (320)
Q Consensus 119 e~l~~L~~aGld~v~i~let~-~~~~~~-i----~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~ 175 (320)
+.++.|++.|++.|.+.+-.. +..+.. + .+..+.+.+.+.++.|++.|++|.+...+
T Consensus 57 ~~l~~lk~~g~N~VrL~v~~~~~~~~~~~~~~~~~~t~~~~~v~~~~~~Ak~~GL~V~l~p~i 119 (343)
T 3civ_A 57 ASMRALAEQPFNWVTLAFAGLMEHPGDPAIAYGPPVTVSDDEIASMAELAHALGLKVCLKPTV 119 (343)
T ss_dssp HHHHHHHHSSCSEEEEEEEEEESSTTCCCCBCSTTTBCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHcCCCEEEEEeeecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHCCCEEEEEEEe
Confidence 566777777777776642211 111110 0 11237889999999999999997665444
No 204
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=72.51 E-value=51 Score=29.14 Aligned_cols=67 Identities=16% Similarity=0.230 Sum_probs=39.5
Q ss_pred HHHHcCCCEEEEecccCCCCCCch----hHHHHHHHHHHhhhc----CceE-EEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 67 KAKEAGSTRFCMGAAWRDTIGRKT----NFNQILEYVKDIRDM----GMEV-CCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 67 ~~~~~g~~~i~l~~g~~~~~ge~~----~~~~l~~~i~~~k~~----~~~i-~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
...+.|++.|.+...+-....... ..+++.++++.+++. ++.+ ....|. ...++.|.+.|+|.+++.
T Consensus 205 ~qi~aGad~i~ifDs~~~~Lsp~~f~ef~~Py~k~i~~~l~~~~~g~~~pvi~f~~g~--~~~l~~l~~~g~d~i~~d 280 (368)
T 4exq_A 205 AQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVAQLKREHDGARVPAIAFTKGG--GLWLEDLAATGVDAVGLD 280 (368)
T ss_dssp HHHHHTCSEEEEEETTGGGSCTTHHHHHTHHHHHHHHHTSCCEETTEECCEEEEETTC--GGGHHHHHTSSCSEEECC
T ss_pred HHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCcEEEEcCCc--HHHHHHHHHhCCCEEeeC
Confidence 345679998887544322222112 235555666666642 3553 344443 466888999999988764
No 205
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=72.35 E-value=14 Score=32.77 Aligned_cols=43 Identities=16% Similarity=0.213 Sum_probs=29.5
Q ss_pred CCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 150 RSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
......++....+.+.|+.+.++.++ ++.=-+...+.++..++
T Consensus 270 GGit~~~~i~~~A~~~gi~~~~~~~~---es~i~~aa~~hlaaa~p 312 (368)
T 3q45_A 270 AGITNALNIIRLAEQAHMPVQVGGFL---ESRLGFTAAAHVALVSK 312 (368)
T ss_dssp TSHHHHHHHHHHHHHTTCCEEECCSS---CCHHHHHHHHHHHTTCT
T ss_pred CCHHHHHHHHHHHHHcCCcEEecCcc---ccHHHHHHHHHHHHcCC
Confidence 46888889999999999987655433 45445566666665553
No 206
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=72.01 E-value=23 Score=31.38 Aligned_cols=73 Identities=11% Similarity=0.121 Sum_probs=44.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHhc-cCeecc
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAG-LTAYNH 134 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~aG-ld~v~i 134 (320)
+.++..+.++.+.+.|+..+.+.++.... ..+.. .+.++.+| ..++++..+.+. +.+.++++.+.| +|.|.+
T Consensus 249 ~~~~~~~~a~~l~~~G~d~i~v~~~~~~~-~~~~~----~~~~~~v~~~~~iPvi~~Ggi-t~~~a~~~l~~g~aD~V~~ 322 (364)
T 1vyr_A 249 EEADALYLIEELAKRGIAYLHMSETDLAG-GKPYS----EAFRQKVRERFHGVIIGAGAY-TAEKAEDLIGKGLIDAVAF 322 (364)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCBTTB-CCCCC----HHHHHHHHHHCCSEEEEESSC-CHHHHHHHHHTTSCSEEEE
T ss_pred CHHHHHHHHHHHHHhCCCEEEEecCcccC-CCccc----HHHHHHHHHHCCCCEEEECCc-CHHHHHHHHHCCCccEEEE
Confidence 56677777777777888877776532111 10111 23455555 346666666555 777777777777 777777
Q ss_pred C
Q 020848 135 N 135 (320)
Q Consensus 135 ~ 135 (320)
+
T Consensus 323 g 323 (364)
T 1vyr_A 323 G 323 (364)
T ss_dssp S
T ss_pred C
Confidence 5
No 207
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=72.00 E-value=20 Score=33.25 Aligned_cols=70 Identities=16% Similarity=0.162 Sum_probs=48.9
Q ss_pred HHHHHHcCCCEEEEecccCCC--------CCCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 65 AQKAKEAGSTRFCMGAAWRDT--------IGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 65 ~~~~~~~g~~~i~l~~g~~~~--------~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
++.+.+.|++.+.++.|.... .| ...+..+.++.+.+++.++++....|..+.+.+.+...+|.+.+.++
T Consensus 284 a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g-~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~~GAd~V~vG 361 (490)
T 4avf_A 284 AKALAEAGADAVKVGIGPGSICTTRIVAGVG-VPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMVAGAYCVMMG 361 (490)
T ss_dssp HHHHHHTTCSEEEECSSCSTTCHHHHHTCBC-CCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHcCCCEEEECCCCCcCCCccccCCCC-ccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHHcCCCeeeec
Confidence 345566899988874321110 01 12445566666666666889999999999999999999999998875
No 208
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=71.91 E-value=21 Score=31.68 Aligned_cols=70 Identities=10% Similarity=0.151 Sum_probs=45.9
Q ss_pred HHHHHHcCCCEEEEecc-cCCCCCCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 65 AQKAKEAGSTRFCMGAA-WRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 65 ~~~~~~~g~~~i~l~~g-~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
++.+.+.|++.|.+.+. ++...+.+..++-+.++.+.+.. .+++..+.|..+.+.+.+...+|.|.|.++
T Consensus 243 a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~-~ipVia~GGI~~g~D~~kalalGAd~V~iG 313 (368)
T 2nli_A 243 ADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNK-RVPIVFDSGVRRGEHVAKALASGADVVALG 313 (368)
T ss_dssp HHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTT-SSCEEECSSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCC-CCeEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 34456689999988542 22222223344444444444331 578889999999888888878999999987
No 209
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=71.85 E-value=23 Score=31.97 Aligned_cols=99 Identities=12% Similarity=0.042 Sum_probs=52.9
Q ss_pred hhHHHHHHHHHHhhhcCce-EEEe-CCCCCHHHHHHHHHhccCeeccC----ccccHHHHhhh------------CCCCC
Q 020848 90 TNFNQILEYVKDIRDMGME-VCCT-LGMLEKHQAIELKKAGLTAYNHN----LDTSREFYSKI------------ITTRS 151 (320)
Q Consensus 90 ~~~~~l~~~i~~~k~~~~~-i~~~-~g~l~~e~l~~L~~aGld~v~i~----let~~~~~~~i------------~~~~~ 151 (320)
...++..++++.+.+.++. +.-. ...-+.+.+++|++. . .+.+. +.+..+..+.+ .+-..
T Consensus 224 ~~~~~A~~~~~~L~~~~i~~iEqP~~~~~~~~~~~~l~~~-~-~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GG 301 (410)
T 3dip_A 224 WGTHAAARICNALADYGVLWVEDPIAKMDNIPAVADLRRQ-T-RAPICGGENLAGTRRFHEMLCADAIDFVMLDLTWCGG 301 (410)
T ss_dssp BCHHHHHHHHHHGGGGTCSEEECCBSCTTCHHHHHHHHHH-H-CCCEEECTTCCSHHHHHHHHHTTCCSEEEECTTTSSC
T ss_pred CCHHHHHHHHHHHHhcCCCEEECCCCCcccHHHHHHHHhh-C-CCCEEecCCcCCHHHHHHHHHcCCCCeEeecccccCC
Confidence 3456777777777766665 3322 233356777777664 1 12221 21111111111 11235
Q ss_pred HHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 152 YDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 152 ~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
+...++....|...|+.+.++.. +.=-+...+.++..++
T Consensus 302 it~~~~ia~~A~~~gi~~~~h~~-----s~i~~aa~~hlaaa~p 340 (410)
T 3dip_A 302 LSEGRKIAALAETHARPLAPHXT-----GPVALMAGLHLALHAP 340 (410)
T ss_dssp HHHHHHHHHHHHHTTCCEEECSS-----CHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHcCCEEeeeCc-----cHHHHHHHHHHHHhCC
Confidence 78888888888899988765543 2223444555555553
No 210
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=71.83 E-value=27 Score=30.87 Aligned_cols=70 Identities=13% Similarity=0.104 Sum_probs=48.0
Q ss_pred HHHHHHcCCCEEEEecc-cCCCCCCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 65 AQKAKEAGSTRFCMGAA-WRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 65 ~~~~~~~g~~~i~l~~g-~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
++.+.+.|++.|.+++. ++...+.+..++-+.++.+.++. .+++..+.|..+.+.+.+...+|.+.|.++
T Consensus 231 A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~-~ipVia~GGI~~g~Dv~kaLalGA~aV~iG 301 (352)
T 3sgz_A 231 AELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKG-KIEVYMDGGVRTGTDVLKALALGARCIFLG 301 (352)
T ss_dssp HHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTT-SSEEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCC-CCeEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 44556789999988542 22222335555556665555432 588889999988877777777999999886
No 211
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=71.77 E-value=11 Score=33.88 Aligned_cols=99 Identities=11% Similarity=0.048 Sum_probs=52.0
Q ss_pred hHHHHHHHHHHhhhcCce-EEEeCCCCCHHHHHHHHHhccCeeccCc-ccc--H-HHHhhh------------CCCCCHH
Q 020848 91 NFNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKAGLTAYNHNL-DTS--R-EFYSKI------------ITTRSYD 153 (320)
Q Consensus 91 ~~~~l~~~i~~~k~~~~~-i~~~~g~l~~e~l~~L~~aGld~v~i~l-et~--~-~~~~~i------------~~~~~~~ 153 (320)
..++..++++.+.+.++. +.-....-+.+.+++|++. + .+.+.. |+. + +..+.+ .+-..+.
T Consensus 227 ~~~~a~~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~-~-~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 304 (407)
T 2o56_A 227 DTTSAIQFGRMIEELGIFYYEEPVMPLNPAQMKQVADK-V-NIPLAAGERIYWRWGYRPFLENGSLSVIQPDICTCGGIT 304 (407)
T ss_dssp CHHHHHHHHHHHGGGCCSCEECSSCSSSHHHHHHHHHH-C-CSCEEECTTCCHHHHHHHHHHTTCCSEECCCTTTTTHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEeCCCChhhHHHHHHHHHh-C-CCCEEeCCCcCCHHHHHHHHHcCCCCEEecCccccCCHH
Confidence 456777777777766654 2221222356677777665 2 223321 221 1 111111 1123577
Q ss_pred HHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 154 ERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 154 ~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
..++.++.|+..|+.+.++.+. +.=-....+.++..++
T Consensus 305 e~~~i~~~A~~~g~~~~~h~~~----s~i~~aa~~hlaaa~~ 342 (407)
T 2o56_A 305 EVKKICDMAHVYDKTVQIHVCG----GPISTAVALHMETAIP 342 (407)
T ss_dssp HHHHHHHHHHTTTCEECCCCCS----CHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHcCCeEeecCCC----CHHHHHHHHHHHHhCC
Confidence 7788888888899887665442 3333444555555553
No 212
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=71.72 E-value=44 Score=28.03 Aligned_cols=175 Identities=13% Similarity=0.099 Sum_probs=103.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHhccCeecc
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAGLTAYNH 134 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i 134 (320)
.++.++.+ ..+.|+.-+-+.+...-+.| .+++ ++.++ ..++++..-.-.+++-++.+-+.+|.|.|.+
T Consensus 64 ~dp~~iA~----~~~~GA~aiSVLTd~~~F~G---s~~~----L~~vr~~v~lPvLrKDFiid~yQI~eAr~~GADaILL 132 (258)
T 4a29_A 64 RDPIEYAK----FMERYAVGLSITTEEKYFNG---SYET----LRKIASSVSIPILMSDFIVKESQIDDAYNLGADTVLL 132 (258)
T ss_dssp CCHHHHHH----HHTTTCSEEEEECCSTTTCC---CHHH----HHHHHTTCSSCEEEESCCCSHHHHHHHHHHTCSEEEE
T ss_pred CCHHHHHH----HHhCCCeEEEEeCCCCCCCC---CHHH----HHHHHHhcCCCEeeccccccHHHHHHHHHcCCCeeeh
Confidence 35555543 34578888877654333334 2333 34445 4577877766678999999999999999987
Q ss_pred CccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeeeeeeecCCCCC
Q 020848 135 NLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPL 214 (320)
Q Consensus 135 ~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~~~p~~gt~~ 214 (320)
-.... +.++..+.++.+++.|+.+ ++-. .+.+|+...+ +++ ++.++++.-. +
T Consensus 133 I~a~L-----------~~~~l~~l~~~A~~lGl~~----LvEV-h~~~El~rAl----~~~--a~iIGINNRn------L 184 (258)
T 4a29_A 133 IVKIL-----------TERELESLLEYARSYGMEP----LILI-NDENDLDIAL----RIG--ARFIGIMSRD------F 184 (258)
T ss_dssp EGGGS-----------CHHHHHHHHHHHHHTTCCC----EEEE-SSHHHHHHHH----HTT--CSEEEECSBC------T
T ss_pred HHhhc-----------CHHHHHHHHHHHHHHhHHH----HHhc-chHHHHHHHh----cCC--CcEEEEeCCC------c
Confidence 55443 2233455677888999875 2212 3666755544 455 6677776532 2
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccC-hhHHHHHHHcCCceEeeCCccccCC
Q 020848 215 QDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFS-MPEQALCFLAGANSIFTGEKLLTTP 276 (320)
Q Consensus 215 ~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~-~~~~~~~~~~Gan~~~~~~~~~~~~ 276 (320)
... ..+.+...+ ....+|...+.++.+ ++. +..-.....+|++.+.+|+.++.++
T Consensus 185 ~tf-~vdl~~t~~----L~~~ip~~~~~VsES--GI~t~~dv~~l~~~G~~a~LVGealmr~~ 240 (258)
T 4a29_A 185 ETG-EINKENQRK----LISMIPSNVVKVAKL--GISERNEIEELRKLGVNAFLISSSLMRNP 240 (258)
T ss_dssp TTC-CBCHHHHHH----HHTTSCTTSEEEEEE--SSCCHHHHHHHHHTTCCEEEECHHHHHCT
T ss_pred ccc-ccCHHHHHH----HHhhCCCCCEEEEcC--CCCCHHHHHHHHHCCCCEEEECHHHhCCC
Confidence 211 233333222 334567655555421 222 2323445678999999998777643
No 213
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=71.69 E-value=37 Score=29.18 Aligned_cols=105 Identities=11% Similarity=0.089 Sum_probs=64.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc--hhHHHHHHHHHHhhh---cCceEEEeCCCC-CHH---HHHHHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGML-EKH---QAIELKK 126 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~--~~~~~l~~~i~~~k~---~~~~i~~~~g~l-~~e---~l~~L~~ 126 (320)
++.+.+.+.++.+.+.|++.+++.|.+ ||- +..++-.++++.+.+ -.+++.+..|.. +.+ ..+...+
T Consensus 33 iD~~~l~~lv~~li~~Gv~gi~v~Gtt----GE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~ 108 (304)
T 3l21_A 33 LDTATAARLANHLVDQGCDGLVVSGTT----GESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAA 108 (304)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESSTT----TTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccc----cchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHH
Confidence 789999999999999999999886532 442 345666666665542 246776666643 333 3445566
Q ss_pred hccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeee
Q 020848 127 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSG 172 (320)
Q Consensus 127 aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~-~Gi~v~~~ 172 (320)
+|+|.+.+-.-.+ . +.+-+..++-.+.+.+ .++++.+.
T Consensus 109 ~Gadavlv~~P~y----~----~~s~~~l~~~f~~va~a~~lPiilY 147 (304)
T 3l21_A 109 EGAHGLLVVTPYY----S----KPPQRGLQAHFTAVADATELPMLLY 147 (304)
T ss_dssp HTCSEEEEECCCS----S----CCCHHHHHHHHHHHHTSCSSCEEEE
T ss_pred cCCCEEEECCCCC----C----CCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 7999887642111 1 1245556666666544 36665433
No 214
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=71.59 E-value=14 Score=32.82 Aligned_cols=78 Identities=14% Similarity=0.119 Sum_probs=49.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEec-ccCC-C---CCC-chhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhcc
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGA-AWRD-T---IGR-KTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGL 129 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~-g~~~-~---~ge-~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGl 129 (320)
-+.+++.+.++...+.|...+.+.. |+.. . .+. ....+.+.++++.+++.|+.+.++.. ..+.++...++|+
T Consensus 169 ~~~~~~~~~v~~~~~~g~~~ik~~~~g~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~--~~~~i~~~l~~g~ 246 (423)
T 3feq_A 169 DGVEGVRLAVREEIQKGATQIKIMASGGVASPTDPIANTQYSEDEIRAIVDEAEAANTYVMAHAY--TGRAIARAVRCGV 246 (423)
T ss_dssp CSHHHHHHHHHHHHHTTCSSEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHTTCCEEEEEE--EHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccCCcCCCCCCcccccCCHHHHHHHHHHHHHCCCeEEEEeC--ChHHHHHHHHcCC
Confidence 4678999999888888887766532 1111 1 111 13457788888888877777554433 3455666667777
Q ss_pred CeeccC
Q 020848 130 TAYNHN 135 (320)
Q Consensus 130 d~v~i~ 135 (320)
+.+.+.
T Consensus 247 ~~i~H~ 252 (423)
T 3feq_A 247 RTIEHG 252 (423)
T ss_dssp CEEEEE
T ss_pred CEEecc
Confidence 766654
No 215
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=71.48 E-value=22 Score=32.70 Aligned_cols=23 Identities=17% Similarity=0.232 Sum_probs=15.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEe
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCMG 79 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l~ 79 (320)
+++.+++.++.+.+.|++.|+|.
T Consensus 156 ~~e~~~~~a~~l~~~Gad~I~l~ 178 (464)
T 2nx9_A 156 NLQTWVDVAQQLAELGVDSIALK 178 (464)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEc
Confidence 56666666666666677666663
No 216
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=71.43 E-value=12 Score=32.14 Aligned_cols=59 Identities=12% Similarity=0.104 Sum_probs=39.8
Q ss_pred HHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 66 QKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 66 ~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
+++.+.|++.|.+-. ...+++.+.++.++. .+.+.++.| ++.+.++.+.+.|+|.++++
T Consensus 212 ~eAl~aGaD~I~LDn---------~~~~~l~~av~~~~~-~v~ieaSGG-It~~~i~~~a~tGVD~IsvG 270 (287)
T 3tqv_A 212 NQAIAAKADIVMLDN---------FSGEDIDIAVSIARG-KVALEVSGN-IDRNSIVAIAKTGVDFISVG 270 (287)
T ss_dssp HHHHHTTCSEEEEES---------CCHHHHHHHHHHHTT-TCEEEEESS-CCTTTHHHHHTTTCSEEECS
T ss_pred HHHHHcCCCEEEEcC---------CCHHHHHHHHHhhcC-CceEEEECC-CCHHHHHHHHHcCCCEEEEC
Confidence 334446887776631 123556666666552 455666655 78899999999999999986
No 217
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=71.38 E-value=12 Score=30.97 Aligned_cols=39 Identities=15% Similarity=0.048 Sum_probs=31.8
Q ss_pred HHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 97 EYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 97 ~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
++++.+++.++++....|..+.+.+.++.++|.+.+.++
T Consensus 172 ~li~~l~~~~ipvIA~GGI~t~~d~~~~~~~GadgV~VG 210 (229)
T 3q58_A 172 AMVTQLSHAGCRVIAEGRYNTPALAANAIEHGAWAVTVG 210 (229)
T ss_dssp HHHHHHHTTTCCEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHcCCCEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 445555533788888888889999999999999999987
No 218
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=71.38 E-value=10 Score=33.72 Aligned_cols=28 Identities=14% Similarity=-0.007 Sum_probs=13.3
Q ss_pred ceEEEeCCCCCHHHHHHHHHhc-cCeeccC
Q 020848 107 MEVCCTLGMLEKHQAIELKKAG-LTAYNHN 135 (320)
Q Consensus 107 ~~i~~~~g~l~~e~l~~L~~aG-ld~v~i~ 135 (320)
+++..+.|. +.+.++++.+.| +|.|.++
T Consensus 288 iPvi~~Ggi-t~e~a~~~l~~G~aD~V~iG 316 (361)
T 3gka_A 288 GPFIVNENF-TLDSAQAALDAGQADAVAWG 316 (361)
T ss_dssp SCEEEESSC-CHHHHHHHHHTTSCSEEEES
T ss_pred CCEEEeCCC-CHHHHHHHHHcCCccEEEEC
Confidence 344444443 555555555554 4555443
No 219
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=71.35 E-value=12 Score=33.21 Aligned_cols=42 Identities=12% Similarity=0.163 Sum_probs=27.4
Q ss_pred CCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcC
Q 020848 150 RSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 194 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 194 (320)
......++....+...|+.+.++.++ ++.=-+...+.++..+
T Consensus 274 GGit~~~~i~~~A~~~g~~~~~~~~~---es~i~~aa~~hlaaa~ 315 (370)
T 1chr_A 274 GGVSATQKIAAVAEASGIASYGGTML---DSTIGTSVALQLYSTV 315 (370)
T ss_dssp CSHHHHHHHHHHHHHHTCEEEECCSC---CTTHHHHHHHHHHTTS
T ss_pred CCHHHHHHHHHHHHHcCCeEEecCCC---ccHHHHHHHHHHHHhC
Confidence 46888889999999999987555443 3333345555555544
No 220
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=71.33 E-value=25 Score=31.99 Aligned_cols=113 Identities=12% Similarity=0.129 Sum_probs=69.9
Q ss_pred CCCHHHHHHHHHHHHH-cCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcC-ceEEEeCCC-CCHHHHHHHHHhc-cC
Q 020848 55 LMTKDAVMQAAQKAKE-AGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMG-MEVCCTLGM-LEKHQAIELKKAG-LT 130 (320)
Q Consensus 55 ~~s~eei~~~~~~~~~-~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~-~~i~~~~g~-l~~e~l~~L~~aG-ld 130 (320)
.++++|+++..+.+.+ .++ +.| ..+.. +..++.+.++-+ +.+ +++....-. .+.+.++++.+.+ +|
T Consensus 278 ~~t~~elid~y~~lle~ypI--~~I----EDPl~-~dD~eg~a~Lt~---~lg~i~IvGDEl~vTn~~~i~~~Ie~~a~n 347 (441)
T 3qtp_A 278 VKDVDGLIAEYVDYGKHYPI--ASI----EDPFA-EDDWAAWNKFTV---EHGNFQIVGDDLLVTNPARVQMAMDKNACN 347 (441)
T ss_dssp EECHHHHHHHHHHHHHHSCE--EEE----ESCSC-TTCHHHHHHHHH---HTTTSEEEESTTTTTCHHHHHHHHHHTCCS
T ss_pred ccCHHHHHHHHHHHhhhcce--eee----cCCCC-hHHHHHHHHHHH---hcCCceEEeccccccCHHHHHHHHHcCCCC
Confidence 4799999999877544 542 223 22222 223333333333 334 655443322 3588888887665 57
Q ss_pred eeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEe--CCCHHHHHHHHHHH
Q 020848 131 AYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL--GEAEEDRVGLLHTL 191 (320)
Q Consensus 131 ~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl--get~ed~~~~l~~l 191 (320)
.+.+.+ .+-.+..+.+++++.++..|+.+ |+|+ |||.+.....+...
T Consensus 348 ~IlIKv----------nqiGGITEalkaa~lA~~~G~~v----mvsHrsgETeDt~iAdLAVa 396 (441)
T 3qtp_A 348 SVLIKV----------NQIGTLTETFKTIKMAQEKGWGV----MASHRSGETEDTFIADLVVG 396 (441)
T ss_dssp EEEECG----------GGTCCHHHHHHHHHHHHHTTCEE----EEECCSSCCSCCHHHHHHHH
T ss_pred EEEecc----------cccccHHHHHHHHHHHHHcCCeE----EEeCCCCCccHhHHHHHHHH
Confidence 777754 33467888899999999999865 6666 78877766555433
No 221
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=71.28 E-value=41 Score=27.45 Aligned_cols=126 Identities=17% Similarity=0.252 Sum_probs=76.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeC----CC-CC---HHHHHHHHHh
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTL----GM-LE---KHQAIELKKA 127 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~----g~-l~---~e~l~~L~~a 127 (320)
.+.+++.+.++.+.+.|+..+++. |.+.+...+.+. ++.+.... |. .. ....++..++
T Consensus 17 ~t~~~i~~l~~~a~~~g~~~v~v~---------~~~v~~~~~~l~-----~v~v~~v~~~P~g~~~~~~k~~~~~~A~~~ 82 (225)
T 1mzh_A 17 LSEKEIEEFVLKSEELGIYAVCVN---------PYHVKLASSIAK-----KVKVCCVIGFPLGLNKTSVKVKEAVEAVRD 82 (225)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEC---------GGGHHHHHHHCS-----SSEEEEEESTTTCCSCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHhCCeEEEEC---------HHHHHHHHHHhc-----CCceeeEecCCCCccchhhhHHHHHHHHHc
Confidence 678999999999999999998864 234433333322 44543222 22 12 2334566778
Q ss_pred ccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEe-CCCHHHHHHHHHHHhcCCCCCCeeee
Q 020848 128 GLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL-GEAEEDRVGLLHTLATLPTHPESVPI 203 (320)
Q Consensus 128 Gld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl-get~ed~~~~l~~l~~l~~~~~~v~~ 203 (320)
|.|.|.+-+.-.. + +..+++.+.+.++.+++..-++.+-+++-. +-+.+++.+..+.+.+.| ++.|..
T Consensus 83 Gad~Id~viN~g~-----~-~~~~~~~~~~~i~~v~~a~~pv~vKvi~e~~~l~~~~~~~~a~~a~eaG--ad~I~t 151 (225)
T 1mzh_A 83 GAQELDIVWNLSA-----F-KSEKYDFVVEELKEIFRETPSAVHKVIVETPYLNEEEIKKAVEICIEAG--ADFIKT 151 (225)
T ss_dssp TCSEEEEECCHHH-----H-HTTCHHHHHHHHHHHHHTCTTSEEEEECCGGGCCHHHHHHHHHHHHHHT--CSEEEC
T ss_pred CCCEEEEEecHHH-----H-hcCChHHHHHHHHHHHHHhcCceEEEEEeCCCCCHHHHHHHHHHHHHhC--CCEEEE
Confidence 9998874332221 1 234567777777777765223334444333 457788999999999998 666643
No 222
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=71.27 E-value=12 Score=33.63 Aligned_cols=81 Identities=12% Similarity=0.114 Sum_probs=42.0
Q ss_pred hHHHHHHHHHHhhhcCce-EEEeCCCCCHHHHHHHHHhccCeeccC----ccccHHHHhhhCC------------CCCHH
Q 020848 91 NFNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKAGLTAYNHN----LDTSREFYSKIIT------------TRSYD 153 (320)
Q Consensus 91 ~~~~l~~~i~~~k~~~~~-i~~~~g~l~~e~l~~L~~aGld~v~i~----let~~~~~~~i~~------------~~~~~ 153 (320)
..++..++++.+.+.++. +.-....-+.+.+++|++. + .+.+. +.+..+..+.+.. -....
T Consensus 232 ~~~~ai~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~-~-~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 309 (398)
T 2pp0_A 232 DRETAIRMGRKMEQFNLIWIEEPLDAYDIEGHAQLAAA-L-DTPIATGEMLTSFREHEQLILGNASDFVQPDAPRVGGIS 309 (398)
T ss_dssp CHHHHHHHHHHHGGGTCSCEECCSCTTCHHHHHHHHHH-C-SSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTSHH
T ss_pred CHHHHHHHHHHHHHcCCceeeCCCChhhHHHHHHHHhh-C-CCCEEecCCcCCHHHHHHHHHcCCCCEEEeCccccCCHH
Confidence 356666777776665554 2221222355666666654 1 12221 1111111111111 13577
Q ss_pred HHHHHHHHHHHcCCeeeeeE
Q 020848 154 ERLETLKHVREAGINVCSGG 173 (320)
Q Consensus 154 ~~l~~i~~a~~~Gi~v~~~~ 173 (320)
..++.++.+++.|+.+.++.
T Consensus 310 e~~~i~~~A~~~gi~~~~h~ 329 (398)
T 2pp0_A 310 PFLKIMDLAAKHGRKLAPHF 329 (398)
T ss_dssp HHHHHHHHHHHTTCEECCCS
T ss_pred HHHHHHHHHHHcCCeEeecC
Confidence 77888889999999865553
No 223
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=70.83 E-value=5.9 Score=32.77 Aligned_cols=72 Identities=14% Similarity=0.063 Sum_probs=48.0
Q ss_pred HHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeeccCc
Q 020848 61 VMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNL 136 (320)
Q Consensus 61 i~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~l 136 (320)
..+.++.+.+.|++.+.+..-.....+.+. ..+.++.++..++++....|..+.+.++.+.++|+|.+.++-
T Consensus 32 ~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~----~~~~i~~i~~~~ipvi~~Ggi~~~~~~~~~~~~Gad~V~lg~ 103 (241)
T 1qo2_A 32 PVELVEKLIEEGFTLIHVVDLSNAIENSGE----NLPVLEKLSEFAEHIQIGGGIRSLDYAEKLRKLGYRRQIVSS 103 (241)
T ss_dssp HHHHHHHHHHTTCCCEEEEEHHHHHHCCCT----THHHHHHGGGGGGGEEEESSCCSHHHHHHHHHTTCCEEEECH
T ss_pred HHHHHHHHHHcCCCEEEEecccccccCCch----hHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHCCCCEEEECc
Confidence 444556666789999988641110001111 245555555346788888899999999999999999997764
No 224
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=70.75 E-value=45 Score=28.01 Aligned_cols=80 Identities=15% Similarity=0.039 Sum_probs=49.5
Q ss_pred CcCCCCHHHHHHHHHHHHHcCCCEEEEe---------------------cccCCCCCCchhHHHHHHHHHHhh-hcCceE
Q 020848 52 GQKLMTKDAVMQAAQKAKEAGSTRFCMG---------------------AAWRDTIGRKTNFNQILEYVKDIR-DMGMEV 109 (320)
Q Consensus 52 ~~~~~s~eei~~~~~~~~~~g~~~i~l~---------------------~g~~~~~ge~~~~~~l~~~i~~~k-~~~~~i 109 (320)
++..-++.+.++.++.+.+.|++.+... +.-.++ |....- .++|+.++ ..++++
T Consensus 115 ~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~akrl~~~G~~aVmPlg~pIGs-G~Gi~~---~~lI~~I~e~~~vPV 190 (265)
T 1wv2_A 115 KTLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEIGCIAVMPLAGLIGS-GLGICN---PYNLRIILEEAKVPV 190 (265)
T ss_dssp TTCCBCHHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHSCCSEEEECSSSTTC-CCCCSC---HHHHHHHHHHCSSCB
T ss_pred cccCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCCCEEEeCCccCCC-CCCcCC---HHHHHHHHhcCCCCE
Confidence 3443568888888888888888776322 100001 111111 23334444 346777
Q ss_pred EEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 110 CCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 110 ~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
....|.-+++.+....++|.|.|.++
T Consensus 191 I~eGGI~TPsDAa~AmeLGAdgVlVg 216 (265)
T 1wv2_A 191 LVDAGVGTASDAAIAMELGCEAVLMN 216 (265)
T ss_dssp EEESCCCSHHHHHHHHHHTCSEEEES
T ss_pred EEeCCCCCHHHHHHHHHcCCCEEEEC
Confidence 77778888888888888898888775
No 225
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=70.71 E-value=24 Score=29.18 Aligned_cols=76 Identities=13% Similarity=0.093 Sum_probs=43.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHH-HHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeecc
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILE-YVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNH 134 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~-~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i 134 (320)
++.|++...++...+.|.+-|.-.+|..++.| ...+++.- .+++. .++.+-...|..+.+.+..+.++|.+++..
T Consensus 145 L~~e~i~~a~ria~eaGADfVKTsTG~~~~~g--At~~dv~l~~m~~~--v~v~VKaaGGirt~~~al~~i~aGa~RiG~ 220 (234)
T 1n7k_A 145 WDDKTLSLLVDSSRRAGADIVKTSTGVYTKGG--DPVTVFRLASLAKP--LGMGVKASGGIRSGIDAVLAVGAGADIIGT 220 (234)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEESCCSSSCCCC--SHHHHHHHHHHHGG--GTCEEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCEEEeCCCCCCCCC--CCHHHHHHHHHHHH--HCCCEEEecCCCCHHHHHHHHHcCccccch
Confidence 46677777777777788877765544222122 12222111 01111 125666677777777777777888886655
Q ss_pred C
Q 020848 135 N 135 (320)
Q Consensus 135 ~ 135 (320)
|
T Consensus 221 S 221 (234)
T 1n7k_A 221 S 221 (234)
T ss_dssp T
T ss_pred H
Confidence 3
No 226
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=70.57 E-value=9 Score=31.71 Aligned_cols=39 Identities=23% Similarity=0.131 Sum_probs=31.4
Q ss_pred HHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 97 EYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 97 ~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
++++.+++.++++....|..+.+.+.++.++|.+.+.++
T Consensus 172 ~~i~~l~~~~ipvIA~GGI~t~~d~~~~~~~GadgV~VG 210 (232)
T 3igs_A 172 PLVKALHDAGCRVIAEGRYNSPALAAEAIRYGAWAVTVG 210 (232)
T ss_dssp HHHHHHHHTTCCEEEESCCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHhcCCcEEEECCCCCHHHHHHHHHcCCCEEEEe
Confidence 344445433788888888889999999999999999997
No 227
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=70.49 E-value=11 Score=32.16 Aligned_cols=30 Identities=13% Similarity=0.052 Sum_probs=24.9
Q ss_pred CceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 106 GMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 106 ~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
++.+....|..+.+.++.+.++|++.+.++
T Consensus 213 ~~pvVaegGI~t~edv~~l~~~GadgvlVG 242 (272)
T 3qja_A 213 SVIRIAESGVRGTADLLAYAGAGADAVLVG 242 (272)
T ss_dssp TSEEEEESCCCSHHHHHHHHHTTCSEEEEC
T ss_pred cCEEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 566667778888999999999999988886
No 228
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=70.28 E-value=30 Score=29.51 Aligned_cols=68 Identities=12% Similarity=0.083 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh-hc--CceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 59 DAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DM--GMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 59 eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k-~~--~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
.++...+.....+|..-+.+-++. .+... +++++++ .. ++++.+--|..+.+.++++.++|.|.|.++
T Consensus 186 A~~~aYa~~gad~G~~lV~LD~~~-----~~v~~----e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVG 256 (286)
T 3vk5_A 186 EEIDRYLHVARAFGFHMVYLYSRN-----EHVPP----EVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFA 256 (286)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECSS-----SCCCH----HHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCC-----CcCCH----HHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEEC
Confidence 334667777777888777775432 22232 4444544 34 678888899999999999999999999987
No 229
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=70.28 E-value=15 Score=32.65 Aligned_cols=124 Identities=18% Similarity=0.197 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhc--CceEEEeCCCCCHHHHHHHHHhccCeeccCc
Q 020848 59 DAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTLGMLEKHQAIELKKAGLTAYNHNL 136 (320)
Q Consensus 59 eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~--~~~i~~~~g~l~~e~l~~L~~aGld~v~i~l 136 (320)
+...+.++.+.+.|++-|.+-.. .|.+ +.+.+.++.+|+. ++.+..- +..+.+.++.+.++|+|.|.++.
T Consensus 99 ~~~~e~~~~a~~aGvdvI~id~a----~G~~---~~~~e~I~~ir~~~~~~~Vi~G-~V~T~e~A~~a~~aGaD~I~Vg~ 170 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCVDVA----HAHA---KYVGKTLKSLRQLLGSRCIMAG-NVATYAGADYLASCGADIIKAGI 170 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECS----CCSS---HHHHHHHHHHHHHHTTCEEEEE-EECSHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEEeCC----CCCc---HhHHHHHHHHHHhcCCCeEEEc-CcCCHHHHHHHHHcCCCEEEEcC
Confidence 55666777888889987766321 1222 3566777888753 5665441 24789999999999999999876
Q ss_pred ccc--HHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEe-C-CCHHHHHHHHHHHhcCCCCCCeeeee
Q 020848 137 DTS--REFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL-G-EAEEDRVGLLHTLATLPTHPESVPIN 204 (320)
Q Consensus 137 et~--~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl-g-et~ed~~~~l~~l~~l~~~~~~v~~~ 204 (320)
... -........+.. .+..+..+.+.-- -++.- | .+.+|+.+.+. +| .+.|.+-
T Consensus 171 g~G~~~~tr~~~g~g~p---~l~aI~~~~~~~~-----PVIAdGGI~~~~di~kALa----~G--Ad~V~iG 228 (361)
T 3r2g_A 171 GGGSVCSTRIKTGFGVP---MLTCIQDCSRADR-----SIVADGGIKTSGDIVKALA----FG--ADFVMIG 228 (361)
T ss_dssp SSSSCHHHHHHHCCCCC---HHHHHHHHTTSSS-----EEEEESCCCSHHHHHHHHH----TT--CSEEEES
T ss_pred CCCcCccccccCCccHH---HHHHHHHHHHhCC-----CEEEECCCCCHHHHHHHHH----cC--CCEEEEC
Confidence 542 121111111222 2455555544321 23323 3 36777777664 45 4555553
No 230
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=70.18 E-value=10 Score=33.99 Aligned_cols=42 Identities=19% Similarity=0.083 Sum_probs=25.7
Q ss_pred CCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcC
Q 020848 150 RSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 194 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 194 (320)
......++..+.+++.|+.+.++.+ .++.=-+...+.++..+
T Consensus 293 GGit~~~~i~~~A~~~g~~~~~h~~---~es~i~~aa~~hlaa~~ 334 (388)
T 2nql_A 293 KGITNFIRIGALAAEHGIDVIPHAT---VGAGIFLAASLQASSTL 334 (388)
T ss_dssp HCHHHHHHHHHHHHHHTCEECCCCC---SSCSHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHcCCeEEeecC---CCcHHHHHHHHHHHHhC
Confidence 3566777888888888887655533 24433445555555544
No 231
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=70.09 E-value=15 Score=32.29 Aligned_cols=41 Identities=15% Similarity=0.218 Sum_probs=24.7
Q ss_pred CHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcC
Q 020848 151 SYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 194 (320)
Q Consensus 151 ~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 194 (320)
...+.++.++.+++.|+.+.++.+ .|+.-.+...+.++..+
T Consensus 270 Git~~~~i~~~A~~~g~~~~~~~~---~es~i~~aa~~hlaa~~ 310 (345)
T 2zad_A 270 GISDALAIVEIAESSGLKLMIGCM---GESSLGINQSVHFALGT 310 (345)
T ss_dssp HHHHHHHHHHHHHTTTCEEEECCS---SCCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCeEEEecC---cccHHHHHHHHHHHHcC
Confidence 455667777777888887644433 35655555555555444
No 232
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=69.96 E-value=11 Score=33.43 Aligned_cols=18 Identities=22% Similarity=0.161 Sum_probs=8.1
Q ss_pred CHHHHHHHHHhc-cCeecc
Q 020848 117 EKHQAIELKKAG-LTAYNH 134 (320)
Q Consensus 117 ~~e~l~~L~~aG-ld~v~i 134 (320)
+.+.++++.+.| +|.|.+
T Consensus 289 t~e~a~~~l~~g~aD~V~i 307 (362)
T 4ab4_A 289 DKASANAALASGKADAVAF 307 (362)
T ss_dssp CHHHHHHHHHTTSCSEEEE
T ss_pred CHHHHHHHHHcCCccEEEE
Confidence 444444444443 444444
No 233
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=69.95 E-value=32 Score=30.56 Aligned_cols=15 Identities=20% Similarity=0.219 Sum_probs=0.0
Q ss_pred hHHHHHHHHcCCCcC
Q 020848 281 DADQLMFKVLGLTPK 295 (320)
Q Consensus 281 ~~~~~~i~~~G~~p~ 295 (320)
.-+...++++|+.+.
T Consensus 343 ~~i~~~l~~~g~~~~ 357 (370)
T 3rmj_A 343 NAFKTKLADLGIELE 357 (370)
T ss_dssp ---------------
T ss_pred HHHHHHHHHcCCCCC
Confidence 334566777888764
No 234
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=69.87 E-value=52 Score=29.16 Aligned_cols=65 Identities=18% Similarity=0.305 Sum_probs=41.6
Q ss_pred HHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhc--CceEEEeCCCCCHHHHHHHHHhccCeeccCcc
Q 020848 65 AQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTLGMLEKHQAIELKKAGLTAYNHNLD 137 (320)
Q Consensus 65 ~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~--~~~i~~~~g~l~~e~l~~L~~aGld~v~i~le 137 (320)
++.+.+.|++-|.+.+. .|.+ +.+.+.++.+++. ++.+..- ...+.+.++.+.++|+|.|.++..
T Consensus 113 ~~~lieaGvd~I~idta----~G~~---~~~~~~I~~ik~~~p~v~Vi~G-~v~t~e~A~~a~~aGAD~I~vG~g 179 (366)
T 4fo4_A 113 VKALVEAGVDVLLIDSS----HGHS---EGVLQRIRETRAAYPHLEIIGG-NVATAEGARALIEAGVSAVKVGIG 179 (366)
T ss_dssp HHHHHHTTCSEEEEECS----CTTS---HHHHHHHHHHHHHCTTCEEEEE-EECSHHHHHHHHHHTCSEEEECSS
T ss_pred HHHHHhCCCCEEEEeCC----CCCC---HHHHHHHHHHHHhcCCCceEee-eeCCHHHHHHHHHcCCCEEEEecC
Confidence 44455567776666321 1212 4567778888754 5554332 136889999999999999988543
No 235
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=69.64 E-value=12 Score=33.75 Aligned_cols=99 Identities=11% Similarity=0.063 Sum_probs=52.7
Q ss_pred hHHHHHHHHHHhhhcCceE-EEeCCCCCHHHHHHHHHhccCeeccC----ccccHHHHhhh------------CCCCCHH
Q 020848 91 NFNQILEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKAGLTAYNHN----LDTSREFYSKI------------ITTRSYD 153 (320)
Q Consensus 91 ~~~~l~~~i~~~k~~~~~i-~~~~g~l~~e~l~~L~~aGld~v~i~----let~~~~~~~i------------~~~~~~~ 153 (320)
..++..++++.+.+.++.. .-....-+.+.+++|++. + .+.+. +.+..+..+.+ .+-..+.
T Consensus 230 ~~~~ai~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~-~-~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 307 (410)
T 2gl5_A 230 GTNSAIQFAKAIEKYRIFLYEEPIHPLNSDNMQKVSRS-T-TIPIATGERSYTRWGYRELLEKQSIAVAQPDLCLCGGIT 307 (410)
T ss_dssp CHHHHHHHHHHHGGGCEEEEECSSCSSCHHHHHHHHHH-C-SSCEEECTTCCTTHHHHHHHHTTCCSEECCCTTTTTHHH
T ss_pred CHHHHHHHHHHHHhcCCCeEECCCChhhHHHHHHHHhh-C-CCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHH
Confidence 4567777777777666652 211222356777777765 1 12221 11111111111 1123577
Q ss_pred HHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 154 ERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 154 ~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
..++.++.|...|+.+.++.+ .+.=-....+.++..++
T Consensus 308 ~~~~ia~~A~~~gi~~~~h~~----~s~i~~aa~~hlaaa~~ 345 (410)
T 2gl5_A 308 EGKKICDYANIYDTTVQVHVC----GGPVSTVAALHMETAIP 345 (410)
T ss_dssp HHHHHHHHHHTTTCEECCCCC----SSHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHcCCeEeecCC----CCHHHHHHHHHHHHhCC
Confidence 788888889999998766644 24334455555555553
No 236
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=69.54 E-value=12 Score=33.84 Aligned_cols=42 Identities=7% Similarity=-0.115 Sum_probs=26.9
Q ss_pred CCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 150 RSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
......++....|...|+.+.++.+ ++.=.+...+.++..++
T Consensus 264 GGitea~kia~lA~~~gi~v~~h~~----~s~i~~aa~~hlaaa~p 305 (405)
T 3rr1_A 264 GGITECVKIAAMAEAYDVALAPHCP----LGPIALAACLHVDFVSW 305 (405)
T ss_dssp THHHHHHHHHHHHHTTTCEECCBCC----SCHHHHHHHHHHHHHCT
T ss_pred CCHHHHHHHHHHHHHcCCEEEeCCC----CcHHHHHHHHHHHHhCC
Confidence 3577778888888899998777643 23334455555555443
No 237
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=69.09 E-value=16 Score=31.02 Aligned_cols=44 Identities=14% Similarity=0.209 Sum_probs=32.9
Q ss_pred hHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 91 NFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 91 ~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
.++...++++.+.. ++.+..-.|..+.+.++++.++|++.+.++
T Consensus 206 dl~~~~~L~~~ip~-~~~vIaesGI~t~edv~~l~~~Ga~gvLVG 249 (272)
T 3tsm_A 206 NLAVSERLAKMAPS-DRLLVGESGIFTHEDCLRLEKSGIGTFLIG 249 (272)
T ss_dssp CTHHHHHHHHHSCT-TSEEEEESSCCSHHHHHHHHTTTCCEEEEC
T ss_pred ChHHHHHHHHhCCC-CCcEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 34555555555442 566667778889999999999999999887
No 238
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=68.97 E-value=17 Score=32.85 Aligned_cols=81 Identities=12% Similarity=0.076 Sum_probs=42.6
Q ss_pred hHHHHHHHHHHhhhcCce-EEEeCCCCCHHHHHHHHHhccC-eeccCc-c---ccHHHHhh-------hCC----CCCHH
Q 020848 91 NFNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKAGLT-AYNHNL-D---TSREFYSK-------IIT----TRSYD 153 (320)
Q Consensus 91 ~~~~l~~~i~~~k~~~~~-i~~~~g~l~~e~l~~L~~aGld-~v~i~l-e---t~~~~~~~-------i~~----~~~~~ 153 (320)
..++..++++.+.+.++. +.-....-+.+.+++|++. +. .+.+.. | +..+..+. +.. -....
T Consensus 234 ~~~~Ai~~~~~l~~~~i~~iEqPl~~~d~~~~~~l~~~-~~~~ipIa~dE~~~~~~~~~~~i~~~~d~i~ik~~~~GGit 312 (415)
T 2p3z_A 234 DVNYATKLAHACAPFNLKWIEECLPPQQYEGYRELKRN-APAGMMVTSGEHHGTLQSFRTLAETGIDIMQPDVGWCGGLT 312 (415)
T ss_dssp CHHHHHHHHHHHGGGTCCEEECCSCTTCHHHHHHHHHH-SCTTCEEEECTTCCSHHHHHHHHHTTCSEECCCHHHHTCHH
T ss_pred CHHHHHHHHHHHhhcCCceEeCCCCcchHHHHHHHHHh-cCCCCcEEcCCCCCCHHHHHHHHHcCCCEEEeCccccCCHH
Confidence 456677777777666654 2222222356677777654 22 123321 1 11111111 111 13567
Q ss_pred HHHHHHHHHHHcCCeeeee
Q 020848 154 ERLETLKHVREAGINVCSG 172 (320)
Q Consensus 154 ~~l~~i~~a~~~Gi~v~~~ 172 (320)
..++.++.|++.|+.+.++
T Consensus 313 ea~~ia~lA~~~gi~v~~h 331 (415)
T 2p3z_A 313 TLVEIAALAKSRGQLVVPH 331 (415)
T ss_dssp HHHHHHHHHHHTTCCBCCC
T ss_pred HHHHHHHHHHHcCCEEEec
Confidence 7788888888889886544
No 239
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=68.92 E-value=14 Score=35.63 Aligned_cols=80 Identities=14% Similarity=0.174 Sum_probs=56.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCC----CCchhHHHHHHHHHHhhh-cCceEEEeCCCCCHHHHHHHHHhc-c
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTI----GRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAG-L 129 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~----ge~~~~~~l~~~i~~~k~-~~~~i~~~~g~l~~e~l~~L~~aG-l 129 (320)
.+.++..+.++.+.+.|+..+.+.+++.... ..........+.++.+|+ .++++..+.|..+.+.++++.+.| +
T Consensus 225 ~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi~~~~~a~~~l~~g~a 304 (671)
T 1ps9_A 225 GTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRINDPQVADDILSRGDA 304 (671)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSSCEEECSSCCSHHHHHHHHHTTSC
T ss_pred CCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcCceEEEeCCCCCHHHHHHHHHcCCC
Confidence 5788888989999999999998875532110 000001123556777774 477887777777999999999988 8
Q ss_pred CeeccC
Q 020848 130 TAYNHN 135 (320)
Q Consensus 130 d~v~i~ 135 (320)
|.|.++
T Consensus 305 D~V~~g 310 (671)
T 1ps9_A 305 DMVSMA 310 (671)
T ss_dssp SEEEES
T ss_pred CEEEeC
Confidence 999886
No 240
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=68.86 E-value=15 Score=32.66 Aligned_cols=127 Identities=14% Similarity=0.101 Sum_probs=63.6
Q ss_pred CHHHHHHHHHHHHHc-CCC-EEEEecccCCCCCCchh-HHHHHHHHHHhhhcCce-EEEeCCCCCHHHHHHHHHhccCee
Q 020848 57 TKDAVMQAAQKAKEA-GST-RFCMGAAWRDTIGRKTN-FNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKAGLTAY 132 (320)
Q Consensus 57 s~eei~~~~~~~~~~-g~~-~i~l~~g~~~~~ge~~~-~~~l~~~i~~~k~~~~~-i~~~~g~l~~e~l~~L~~aGld~v 132 (320)
++++-++.++.+++. |-. .+.+ .. + + ... .++..++++.+.+.++. +.-....-+.+.+++|++. . .+
T Consensus 175 ~~~~d~~~v~avR~a~g~~~~l~v-Da-n---~-~~~d~~~A~~~~~~l~~~~i~~iEqP~~~~~~~~~~~l~~~-~-~i 246 (374)
T 3sjn_A 175 DPDTDYAIVKAVREAAGPEMEVQI-DL-A---S-KWHTCGHSAMMAKRLEEFNLNWIEEPVLADSLISYEKLSRQ-V-SQ 246 (374)
T ss_dssp CHHHHHHHHHHHHHHHCSSSEEEE-EC-T---T-TTCSHHHHHHHHHHSGGGCCSEEECSSCTTCHHHHHHHHHH-C-SS
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEE-EC-C---C-CCCCHHHHHHHHHHhhhcCceEEECCCCcccHHHHHHHHhh-C-CC
Confidence 456666666666553 433 2322 21 1 1 123 55666666666665654 2211122345666666654 1 12
Q ss_pred ccC----ccccHHHHhhh------------CCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 133 NHN----LDTSREFYSKI------------ITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 133 ~i~----let~~~~~~~i------------~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
.+. +.+..+..+.+ .+-......++....+...|+.+.++.+ ++.=.+...+.++..++
T Consensus 247 PIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~----~~~i~~aa~~hlaaa~~ 321 (374)
T 3sjn_A 247 KIAGGESLTTRYEFQEFITKSNADIVQPDITRCGGITEMKKIYDIAQMNGTQLIPHGF----STGILLHASVHFLAACE 321 (374)
T ss_dssp EEEECTTCCHHHHHHHHHHHHCCSEECCBTTTSSHHHHHHHHHHHHHHHTCEECCBCC----SCHHHHHHHHHHHHTCT
T ss_pred CEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecCC----CcHHHHHHHHHHHHhCC
Confidence 221 11111111111 1123578888889999999998766654 24334455555555554
No 241
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=68.76 E-value=18 Score=32.97 Aligned_cols=43 Identities=5% Similarity=-0.163 Sum_probs=25.6
Q ss_pred CCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcC
Q 020848 150 RSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 194 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 194 (320)
..+...++....|...|+.+.++... .++.=-+...+.++..+
T Consensus 326 GGit~~~~ia~~A~~~gi~~~~h~~~--~~s~Ig~aa~~hlaaa~ 368 (440)
T 3t6c_A 326 GGITPAKKIAIYSELNGVRTAWHSPG--DISPIGVCANMHLDLSS 368 (440)
T ss_dssp TSHHHHHHHHHHHHHTTCEECCCCSS--SSCHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHcCCEEEeccCC--CccHHHHHHHHHHHHhC
Confidence 35777788888888888886555432 12433344455555444
No 242
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=68.71 E-value=30 Score=30.45 Aligned_cols=43 Identities=12% Similarity=0.060 Sum_probs=31.1
Q ss_pred CCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 150 RSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
..+...++.++.+++.|+.+.++.+ .|+.-.+...+.+...++
T Consensus 273 GGit~~~~i~~~A~~~g~~~~~~~~---~es~i~~~a~~~laaa~~ 315 (366)
T 1tkk_A 273 GGISGAEKINAMAEACGVECMVGSM---IETKLGITAAAHFAASKR 315 (366)
T ss_dssp TSHHHHHHHHHHHHHHTCCEEECCS---SCCHHHHHHHHHHHHHCT
T ss_pred cCHHHHHHHHHHHHHcCCcEEecCc---cccHHHHHHHHHHHHcCC
Confidence 3577778889999999998755543 467666777777776664
No 243
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=68.67 E-value=40 Score=30.01 Aligned_cols=23 Identities=17% Similarity=0.164 Sum_probs=17.8
Q ss_pred CCHHHHHHHHHHHHHcCCeeeee
Q 020848 150 RSYDERLETLKHVREAGINVCSG 172 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~v~~~ 172 (320)
......++.++.+++.|+.+.++
T Consensus 274 GGit~a~~i~~~A~~~gi~~~~~ 296 (389)
T 2oz8_A 274 GQVTDVMRIGWLAAELGIPISIG 296 (389)
T ss_dssp SCHHHHHHHHHHHHHHTCCEEEC
T ss_pred cCHHHHHHHHHHHHHcCCeEeec
Confidence 56777788888888888886555
No 244
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=68.65 E-value=20 Score=32.05 Aligned_cols=22 Identities=9% Similarity=-0.012 Sum_probs=15.3
Q ss_pred CCHHHHHHHHHHHHHcCCeeee
Q 020848 150 RSYDERLETLKHVREAGINVCS 171 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~v~~ 171 (320)
......++....|...|+.+..
T Consensus 296 GGit~~~kia~~A~~~gv~v~~ 317 (388)
T 4h83_A 296 GGPTAWLRTAAIATSYDVQMGH 317 (388)
T ss_dssp TCHHHHHHHHHHHHHTTCEECC
T ss_pred CCHHHHHHHHHHHHHCCCEEEe
Confidence 3566777777888888876543
No 245
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=68.61 E-value=31 Score=28.79 Aligned_cols=105 Identities=15% Similarity=0.240 Sum_probs=64.9
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCch-hHHHHHHHHHHhhhcCce-EEEeCCC--CCHHH----HHHHH
Q 020848 54 KLMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKT-NFNQILEYVKDIRDMGME-VCCTLGM--LEKHQ----AIELK 125 (320)
Q Consensus 54 ~~~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~-~~~~l~~~i~~~k~~~~~-i~~~~g~--l~~e~----l~~L~ 125 (320)
..++.+.+.+.++.+.+.|+ .++.+|.. -|-. ....+-+.++.+|+.|+. +.+++|. ++.+. ++..+
T Consensus 50 ~l~~~~~l~eki~l~~~~gV-~v~~GGTl----~E~~~~qg~~~~yl~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~~~ 124 (251)
T 1qwg_A 50 AVIDRDVVKEKINYYKDWGI-KVYPGGTL----FEYAYSKGKFDEFLNECEKLGFEAVEISDGSSDISLEERNNAIKRAK 124 (251)
T ss_dssp GGSCHHHHHHHHHHHHTTTC-EEEECHHH----HHHHHHTTCHHHHHHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHHH
T ss_pred eecCHHHHHHHHHHHHHcCC-eEECCcHH----HHHHHHcCcHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHH
Confidence 33566667777777788888 55444311 1111 113466677788888887 7888887 44444 44555
Q ss_pred HhccCeec-cCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCe
Q 020848 126 KAGLTAYN-HNLDTSREFYSKIITTRSYDERLETLKHVREAGIN 168 (320)
Q Consensus 126 ~aGld~v~-i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~ 168 (320)
+.|+..++ ++.+..+. ....+.+++++.++...++|-.
T Consensus 125 ~~G~~v~~EvG~k~~~~-----~~~~~~~~~I~~~~~~LeAGA~ 163 (251)
T 1qwg_A 125 DNGFMVLTEVGKKMPDK-----DKQLTIDDRIKLINFDLDAGAD 163 (251)
T ss_dssp HTTCEEEEEECCSSHHH-----HTTCCHHHHHHHHHHHHHHTCS
T ss_pred HCCCEEeeeccccCCcc-----cCCCCHHHHHHHHHHHHHCCCc
Confidence 66765432 33322211 1346889999999999999976
No 246
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=68.45 E-value=21 Score=31.91 Aligned_cols=22 Identities=5% Similarity=-0.067 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHHHcCCCEEEEe
Q 020848 58 KDAVMQAAQKAKEAGSTRFCMG 79 (320)
Q Consensus 58 ~eei~~~~~~~~~~g~~~i~l~ 79 (320)
.++..+.++.+.+.|+.-+.+.
T Consensus 265 ~~~~~~la~~l~~~Gvd~i~v~ 286 (379)
T 3aty_A 265 EALTKHLCKKIEPLSLAYLHYL 286 (379)
T ss_dssp HHHHHHHHHHHGGGCCSEEEEE
T ss_pred HHHHHHHHHHHHHhCCCEEEEc
Confidence 3444444444444454444443
No 247
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=68.43 E-value=33 Score=30.58 Aligned_cols=79 Identities=9% Similarity=0.049 Sum_probs=50.5
Q ss_pred CCHHHHHHHHHHHHHc---CCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeCCCC--CHHHHH-HHHHhcc
Q 020848 56 MTKDAVMQAAQKAKEA---GSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGML--EKHQAI-ELKKAGL 129 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~---g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l--~~e~l~-~L~~aGl 129 (320)
+++++..+.++.+.+. ++-.|-|.|.. .++.| ..+.+.++.+++.|+.+.++.|.. ..+.+. .+...|.
T Consensus 162 ~~~e~a~~~~~~a~~~~~~~VvG~dL~g~E--~~~p~---~~f~~~f~~ar~~Gl~~t~HAGE~~~p~~~i~~al~~lga 236 (380)
T 4gxw_A 162 QDPDEAVAIVDWMKANRADEVAGIGIDYRE--NDRPP---ELFWKAYRDARAAGFRTTAHAGEFGMPWRNVETAVDLLHV 236 (380)
T ss_dssp SCHHHHHHHHHHHHHTCCTTBCEEEEESCC--TTCCG---GGGHHHHHHHHHTTCEEEEEESCTTCCHHHHHHHHHTSCC
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEeecCCC--CCCCH---HHHHHHHHHHHHcCCCeeeeccccCCchHHHHHHHHHcCC
Confidence 5677777777665553 45566666532 22212 345666677788889888888864 334444 4445799
Q ss_pred CeeccCcccc
Q 020848 130 TAYNHNLDTS 139 (320)
Q Consensus 130 d~v~i~let~ 139 (320)
++|.+++...
T Consensus 237 ~RIgHG~~~~ 246 (380)
T 4gxw_A 237 DRVDHGYTIV 246 (380)
T ss_dssp SEEEECGGGG
T ss_pred cccccceeec
Confidence 9999987665
No 248
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=68.43 E-value=16 Score=33.37 Aligned_cols=115 Identities=14% Similarity=0.119 Sum_probs=70.4
Q ss_pred CCCHHHHHHHHHHHH-HcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeCC-CCCHHHHHHHHHhc-cCe
Q 020848 55 LMTKDAVMQAAQKAK-EAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLG-MLEKHQAIELKKAG-LTA 131 (320)
Q Consensus 55 ~~s~eei~~~~~~~~-~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g-~l~~e~l~~L~~aG-ld~ 131 (320)
.++++|+++..+.+. +.++ +.| ..+.. +..++.+.++-+.+.. .+++....- ..+.+.++++.+.+ +|.
T Consensus 280 ~~t~~Elid~y~~lle~ypI--v~I----EDPl~-~dD~eg~a~Lt~~lg~-~iqIvGDDl~vTn~~~i~~~Ie~~a~n~ 351 (452)
T 3otr_A 280 HLTGEKLKEVYEGWLKKYPI--ISV----EDPFD-QDDFASFSAFTKDVGE-KTQVIGDDILVTNILRIEKALKDKACNC 351 (452)
T ss_dssp EECHHHHHHHHHHHHHHSCE--EEE----ECCSC-TTCHHHHHHHHHHHTT-TSEEEESTTTTTCHHHHHHHHHHTCCSE
T ss_pred cccHHHHHHHHHHHHhhhCc--eEE----ecCCC-hhhHHHHHHHHHhhCC-CeEEEeCccccCCHHHHHHHHhcCCCCE
Confidence 379999999997754 4553 223 22222 2234444443333321 266544332 23577887776665 577
Q ss_pred eccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEe--CCCHHHHHHHHHHH
Q 020848 132 YNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL--GEAEEDRVGLLHTL 191 (320)
Q Consensus 132 v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl--get~ed~~~~l~~l 191 (320)
+.+.+ ..-.+..+.+++++.++..|+.+ |+|+ |||.+.....+...
T Consensus 352 IlIKv----------nQIGgITEalka~~lA~~~G~~v----mvshrSGETeD~~iAdLaVg 399 (452)
T 3otr_A 352 LLLKV----------NQIGSVTEAIEACLLAQKSGWGV----QVSHRSGETEDSFIADLVVG 399 (452)
T ss_dssp EEECH----------HHHCCHHHHHHHHHHHHHTTCEE----EEECCSSCCSCCHHHHHHHH
T ss_pred EEeec----------cccccHHHHHHHHHHHHHcCCeE----EEeCCCCCCchhHHHHHHHH
Confidence 77754 22357778899999999999765 7777 89988776665444
No 249
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=68.37 E-value=23 Score=30.49 Aligned_cols=67 Identities=15% Similarity=0.167 Sum_probs=37.5
Q ss_pred CCHHHHHHHHHHHHHcC-CCEEEEecccCCCCCCchhHHHHHHHHHHhh---hcCceEEEeCCCCCHHHHHHHHHh
Q 020848 56 MTKDAVMQAAQKAKEAG-STRFCMGAAWRDTIGRKTNFNQILEYVKDIR---DMGMEVCCTLGMLEKHQAIELKKA 127 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g-~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k---~~~~~i~~~~g~l~~e~l~~L~~a 127 (320)
.+.+|..+.++.+++.- -..++|.+ +. +......+-+.|++.+ +.|..+..-.+..+.+.++++.++
T Consensus 135 ~~~~e~~~ri~Aa~~A~~~~~~~I~A--RT---Da~~~~gldeai~Ra~ay~~AGAD~if~~~~~~~ee~~~~~~~ 205 (298)
T 3eoo_A 135 VPAGEMVDRIKAAVDARTDETFVIMA--RT---DAAAAEGIDAAIERAIAYVEAGADMIFPEAMKTLDDYRRFKEA 205 (298)
T ss_dssp CCHHHHHHHHHHHHHHCSSTTSEEEE--EE---CTHHHHHHHHHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhccCCCeEEEE--ee---hhhhhcCHHHHHHHHHhhHhcCCCEEEeCCCCCHHHHHHHHHH
Confidence 67788777777665532 12344433 11 1122344666666655 446665445566677777777665
No 250
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=68.15 E-value=64 Score=28.54 Aligned_cols=141 Identities=13% Similarity=0.133 Sum_probs=76.2
Q ss_pred CCHH-HHHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHc-CCeeeeeEEEEeCCCHHHHHHHHHHHhc
Q 020848 116 LEKH-QAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREA-GINVCSGGIIGLGEAEEDRVGLLHTLAT 193 (320)
Q Consensus 116 l~~e-~l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~-Gi~v~~~~i~Glget~ed~~~~l~~l~~ 193 (320)
.+.+ ..+....+|.|.+.+.+....+.... ....++..+++.++.+++. ++++.+.. +|.+.+.++ ++.+.+
T Consensus 155 ~~~e~~~~~ve~~~adal~ihln~~qe~~~p-~Gd~~~~~~~~~I~~l~~~~~~PVivK~-vg~g~s~e~----A~~l~~ 228 (365)
T 3sr7_A 155 KPYQAGLQAVRDLQPLFLQVHINLMQELLMP-EGEREFRSWKKHLSDYAKKLQLPFILKE-VGFGMDVKT----IQTAID 228 (365)
T ss_dssp SCHHHHHHHHHHHCCSCEEEEECHHHHHTSS-SSCCCCHHHHHHHHHHHHHCCSCEEEEE-CSSCCCHHH----HHHHHH
T ss_pred CCHHHHHHHHHhcCCCEEEEeccccccccCC-CCCCcHHHHHHHHHHHHHhhCCCEEEEE-CCCCCCHHH----HHHHHH
Confidence 3444 45555678999998888766433211 1234677788888888874 66666663 466667655 444556
Q ss_pred CCCCCCeeeeeeeeecCCCCCC--------------CCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccChhHHHHHH
Q 020848 194 LPTHPESVPINALLAVKGTPLQ--------------DQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCF 259 (320)
Q Consensus 194 l~~~~~~v~~~~~~p~~gt~~~--------------~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~~~~~~~~ 259 (320)
.| ++.|.+... +||.+. +.. ++..+.+.. .+.+.++..+-.++|-. .+..-..++
T Consensus 229 aG--ad~I~V~g~---GGt~~a~ie~~r~~~~~~~~~~g-~pt~~~L~~---v~~~~~~ipvia~GGI~--~g~Dv~KaL 297 (365)
T 3sr7_A 229 LG--VKTVDISGR---GGTSFAYIENRRGGNRSYLNQWG-QTTAQVLLN---AQPLMDKVEILASGGIR--HPLDIIKAL 297 (365)
T ss_dssp HT--CCEEECCCB---C--------------CGGGTTCS-CBHHHHHHH---HGGGTTTSEEEECSSCC--SHHHHHHHH
T ss_pred cC--CCEEEEeCC---CCcccchhhcccccccccccccc-ccHHHHHHH---HHHhcCCCeEEEeCCCC--CHHHHHHHH
Confidence 66 666666442 455432 112 222232322 23333333333343321 123346778
Q ss_pred HcCCceEeeCCccc
Q 020848 260 LAGANSIFTGEKLL 273 (320)
Q Consensus 260 ~~Gan~~~~~~~~~ 273 (320)
..||+.+..|..++
T Consensus 298 alGAdaV~ig~~~l 311 (365)
T 3sr7_A 298 VLGAKAVGLSRTML 311 (365)
T ss_dssp HHTCSEEEESHHHH
T ss_pred HcCCCEEEECHHHH
Confidence 89999998886554
No 251
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=67.88 E-value=56 Score=27.78 Aligned_cols=223 Identities=13% Similarity=0.154 Sum_probs=120.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc-hhHHHHHHHHHHhhhc--CceEEEeCCCC---CHH-HHHHHHHhc
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK-TNFNQILEYVKDIRDM--GMEVCCTLGML---EKH-QAIELKKAG 128 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~-~~~~~l~~~i~~~k~~--~~~i~~~~g~l---~~e-~l~~L~~aG 128 (320)
+++|||.+.+....+.|..-+.+-. +...|.| ...+.+.+++..+++. ++-+..|.|.. +.+ .+.-+ +..
T Consensus 31 vTpeEia~~A~~a~~AGAaivHlHv--Rd~~G~ps~d~~~~~e~~~~IR~~~pd~ii~~TTg~~~~~~~eeR~~~~-~~~ 107 (282)
T 2y7e_A 31 ITPEEQAKEAKACFEAGARVIHLHI--REDDGRPSQRLDRFQEAISAIREVVPEIIIQISTGGAVGESFDKRLAPL-ALK 107 (282)
T ss_dssp CSHHHHHHHHHHHHHHTEEEEEECE--ECTTSCEECCHHHHHHHHHHHHHHCTTSEEEECSSCSTTCCHHHHHGGG-GGC
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEee--cCCCCCcCCCHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCHHHHHHHh-hcC
Confidence 8999999999999999988877732 2222333 3456667777777743 67666665532 333 34333 444
Q ss_pred cCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCC---CCCeeeeee
Q 020848 129 LTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPT---HPESVPINA 205 (320)
Q Consensus 129 ld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~---~~~~v~~~~ 205 (320)
-|..++++=+.. +...--..+++.+.+.++.+++.|++....+ + +..++.....++++ |. .+.++.|
T Consensus 108 Pe~asl~~gs~N--f~~~v~~n~~~~~~~~~~~~~e~Gv~pE~e~-f----d~g~l~~~~~l~~~-Gl~p~~p~~~~~-- 177 (282)
T 2y7e_A 108 PEMATLNAGTLN--FGDDIFINHPADIIRLAEAFKQYNVVPEVEV-Y----ESGMVDAVARLIKK-GIITQNPLHIQF-- 177 (282)
T ss_dssp CSEEEEECCCEE--ETTEEECCCHHHHHHHHHHHHHTTCEEEEEE-C----SHHHHHHHHHHHHT-TSCCCSSCEEEE--
T ss_pred CCEEEecccccc--cccccccCCHHHHHHHHHHHHHcCCeEEEEE-E----CHHHHHHHHHHHHc-CCCCCCCeEEEE--
Confidence 455555443321 0000013678888999999999998765442 2 34566665555443 31 1122222
Q ss_pred eeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecC-CcccccChhHHHHHHHcCCceEee-CCccccCCC------
Q 020848 206 LLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLS-AGRVRFSMPEQALCFLAGANSIFT-GEKLLTTPN------ 277 (320)
Q Consensus 206 ~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~-~g~~~~~~~~~~~~~~~Gan~~~~-~~~~~~~~~------ 277 (320)
+- |-+.. -+.+++.+..++.....-.++..+.+. -|...+ +....++..|.+.-+. +|.+....|
T Consensus 178 -Vl--Gv~~g--~~~~~~~L~~~~~~lp~~~~~~~wsv~g~Gr~q~--p~~~~A~~~GGhvRVGlEDnl~~~~G~~A~sN 250 (282)
T 2y7e_A 178 -VL--GVPGG--MSGKPKNLMYMMEHLKEEIPTATWAVAGIGRWHI--PTSLIAMVTGGHIRCGFEDNIFYHKGVIAESN 250 (282)
T ss_dssp -EE--CCTTS--CCCCHHHHHHHHHHHHHHSTTCEEEEEECGGGHH--HHHHHHHTTTCEEEESTTTCCEEETTEECSCH
T ss_pred -EE--ecCCC--CCCCHHHHHHHHHhcccccCCCeEEEEecCcchH--HHHHHHHHcCCCeEEccccccCCCCCCCCCCH
Confidence 21 22211 246677766665543211113332222 111111 2334567778774332 232222222
Q ss_pred -CChhHHHHHHHHcCCCcCCCC
Q 020848 278 -NDFDADQLMFKVLGLTPKAPS 298 (320)
Q Consensus 278 -~~~~~~~~~i~~~G~~p~~~~ 298 (320)
.-+++.+++++++|+.|...+
T Consensus 251 a~lV~~~~~i~~~lgr~vAtp~ 272 (282)
T 2y7e_A 251 AQLVARLARIAKEIGRPLATPE 272 (282)
T ss_dssp HHHHHHHHHHHHHHTCCBCCHH
T ss_pred HHHHHHHHHHHHHcCCCCCCHH
Confidence 237788899999999987654
No 252
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=67.87 E-value=58 Score=28.42 Aligned_cols=68 Identities=13% Similarity=0.158 Sum_probs=40.0
Q ss_pred HHHHHHcCCCEEEEecccCCCCCCch-----hHHHHHHHHHHhhhc----CceE-EEeCCCCCHHHHHHHHHhccCeecc
Q 020848 65 AQKAKEAGSTRFCMGAAWRDTIGRKT-----NFNQILEYVKDIRDM----GMEV-CCTLGMLEKHQAIELKKAGLTAYNH 134 (320)
Q Consensus 65 ~~~~~~~g~~~i~l~~g~~~~~ge~~-----~~~~l~~~i~~~k~~----~~~i-~~~~g~l~~e~l~~L~~aGld~v~i 134 (320)
++...+.|++.|.+...+-...+ |. ..+++.++++.+++. ++.+ ....|. ...+..|.+.|+|.+++
T Consensus 193 ~~~~~~aGad~i~i~d~~~~~ls-p~~f~ef~~p~~k~i~~~i~~~~~~~~~~ii~~~~g~--~~~l~~l~~~g~d~i~~ 269 (354)
T 3cyv_A 193 LNAQIKAGAQAVMIFDTWGGVLT-GRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGG--GQWLEAMAETGCDALGL 269 (354)
T ss_dssp HHHHHHTTCSEEEEECTTGGGSC-HHHHHHHTHHHHHHHHHHSCSEETTEECCEEEECTTT--TTTHHHHHTTSCSEEEC
T ss_pred HHHHHHhCCCEEEEeCCccccCC-HHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEECCCH--HHHHHHHHhcCCCEEEe
Confidence 33445689988877543322222 22 234555666666643 3553 333333 45788899999999886
Q ss_pred C
Q 020848 135 N 135 (320)
Q Consensus 135 ~ 135 (320)
.
T Consensus 270 d 270 (354)
T 3cyv_A 270 D 270 (354)
T ss_dssp C
T ss_pred C
Confidence 4
No 253
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=67.67 E-value=16 Score=32.04 Aligned_cols=65 Identities=18% Similarity=0.165 Sum_probs=44.8
Q ss_pred cCceEEEeCCCCCHHHHHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEE
Q 020848 105 MGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGII 175 (320)
Q Consensus 105 ~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~ 175 (320)
.|......+|. ..+.++.|+++|++.|.+.+..-|. ....+++.+++.++.++++|+++-+++-+
T Consensus 18 ~g~~~~~~~G~-~~~~~~ilk~~G~n~vRlri~v~P~-----~g~~d~~~~~~~~~~ak~~Gl~v~ld~hy 82 (334)
T 1fob_A 18 EGYSYKNLNGQ-TQALETILADAGINSIRQRVWVNPS-----DGSYDLDYNLELAKRVKAAGMSLYLDLHL 82 (334)
T ss_dssp TTCCCBCTTSC-BCCHHHHHHHHTCCEEEEEECSCCT-----TCTTCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCEEECCCCC-CchHHHHHHHcCCCEEEEEEEECCC-----CCccCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 44443333443 3467899999999999885531121 12357899999999999999998777644
No 254
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=67.60 E-value=17 Score=32.29 Aligned_cols=23 Identities=9% Similarity=0.065 Sum_probs=17.0
Q ss_pred CHHHHHHHHHHHHHcCCeeeeeE
Q 020848 151 SYDERLETLKHVREAGINVCSGG 173 (320)
Q Consensus 151 ~~~~~l~~i~~a~~~Gi~v~~~~ 173 (320)
.....++....|.+.|+.+.++.
T Consensus 284 Git~~~~ia~~A~~~gi~~~~h~ 306 (372)
T 3tj4_A 284 GITEYIQVADLALAHRLPVVPHA 306 (372)
T ss_dssp HHHHHHHHHHHHHHTTCCBCCCC
T ss_pred CHHHHHHHHHHHHHcCCEEEecC
Confidence 46777888888888888765554
No 255
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=67.39 E-value=12 Score=32.23 Aligned_cols=64 Identities=11% Similarity=0.115 Sum_probs=41.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
++||+. ++.+.|++.|.|-. ...+.+-+.++.+. ..+.+.++.| ++.+.++++.+.|+|.|+++
T Consensus 218 tlde~~----eAl~aGaD~I~LDn---------~~~~~l~~av~~i~-~~v~ieaSGG-I~~~~i~~~a~tGVD~isvG 281 (298)
T 3gnn_A 218 TLDQLR----TALAHGARSVLLDN---------FTLDMMRDAVRVTE-GRAVLEVSGG-VNFDTVRAIAETGVDRISIG 281 (298)
T ss_dssp SHHHHH----HHHHTTCEEEEEES---------CCHHHHHHHHHHHT-TSEEEEEESS-CSTTTHHHHHHTTCSEEECG
T ss_pred CHHHHH----HHHHcCCCEEEECC---------CCHHHHHHHHHHhC-CCCeEEEEcC-CCHHHHHHHHHcCCCEEEEC
Confidence 455543 34446887776632 12355666666553 2355556644 78999999999999999876
No 256
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=67.39 E-value=17 Score=32.59 Aligned_cols=118 Identities=13% Similarity=0.141 Sum_probs=58.3
Q ss_pred CCHHHH----HHHHHHHHHcC--CCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCce---EEEeCCCCCHHHHHHHHH
Q 020848 56 MTKDAV----MQAAQKAKEAG--STRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGME---VCCTLGMLEKHQAIELKK 126 (320)
Q Consensus 56 ~s~eei----~~~~~~~~~~g--~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~---i~~~~g~l~~e~l~~L~~ 126 (320)
++.+++ .+.++.+++.| . .+.+.-. ..+ ....+++.++++.+.+. .. +.-|.|.+++..+.+|.+
T Consensus 107 ~s~~e~l~~~~~~v~~ak~~g~~~-~v~~~~e-d~~---~~~~~~~~~~~~~~~~~-a~~i~l~DT~G~~~P~~~~~lv~ 180 (382)
T 2ztj_A 107 RDIPRIIEEAKEVIAYIREAAPHV-EVRFSAE-DTF---RSEEQDLLAVYEAVAPY-VDRVGLADTVGVATPRQVYALVR 180 (382)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCTTS-EEEEEET-TTT---TSCHHHHHHHHHHHGGG-CSEEEEEETTSCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHcCCCE-EEEEEEE-eCC---CCCHHHHHHHHHHHHHh-cCEEEecCCCCCCCHHHHHHHHH
Confidence 455554 34444555666 4 3333221 111 13456677777776655 33 345778877776655544
Q ss_pred hccC----eeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCC-----CHHHHHHHHH
Q 020848 127 AGLT----AYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGE-----AEEDRVGLLH 189 (320)
Q Consensus 127 aGld----~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glge-----t~ed~~~~l~ 189 (320)
.=.+ .+.+++ +...++..-+.+.-.+.++|...--..+-|+|+ ..+++...+.
T Consensus 181 ~l~~~~~~~~~i~~----------H~Hnd~GlAvAN~laAv~aGa~~vd~tv~GlGeraGN~~lE~vv~~L~ 242 (382)
T 2ztj_A 181 EVRRVVGPRVDIEF----------HGHNDTGCAIANAYEAIEAGATHVDTTILGIGERNGITPLGGFLARMY 242 (382)
T ss_dssp HHHHHHTTTSEEEE----------EEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSSTTCBCBHHHHHHHHH
T ss_pred HHHHhcCCCCeEEE----------EeCCCccHHHHHHHHHHHhCCCEEEEccccccccccchhHHHHHHHHH
Confidence 3111 122322 222333333455556666777644444566654 4455554443
No 257
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=67.24 E-value=36 Score=31.95 Aligned_cols=23 Identities=13% Similarity=0.250 Sum_probs=16.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEe
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCMG 79 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l~ 79 (320)
+++.+++.++.+.+.|++.|+|.
T Consensus 173 ~~e~~~~~a~~l~~~Gad~I~L~ 195 (539)
T 1rqb_A 173 TVEGYVKLAGQLLDMGADSIALK 195 (539)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEeC
Confidence 56777777777777777777664
No 258
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=67.22 E-value=21 Score=31.68 Aligned_cols=128 Identities=8% Similarity=0.083 Sum_probs=64.4
Q ss_pred CCHHHHHHHHHHHHHc-CCC-EEEEecccCCCCCCchhHHHHHHHHHHhhhcCce-EEEeCCCCCHHHHHHHHHhccCee
Q 020848 56 MTKDAVMQAAQKAKEA-GST-RFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKAGLTAY 132 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~-g~~-~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~-i~~~~g~l~~e~l~~L~~aGld~v 132 (320)
.++++-++.++.+++. |-+ .+.+ ... .....++..++++.+.+.++. +.-....-+.+.+++|++.- .+
T Consensus 169 ~~~~~di~~v~avr~~~g~~~~l~v-DaN-----~~~~~~~A~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~--~i 240 (378)
T 4hpn_A 169 FGVEEDLRVIAAVREAIGPDMRLMI-DAN-----HGYTVTEAITLGDRAAGFGIDWFEEPVVPEQLDAYARVRAGQ--PI 240 (378)
T ss_dssp SCHHHHHHHHHHHHHHHTTTSEEEE-ECT-----TCCCHHHHHHHHHHHGGGCCSCEECCSCTTCHHHHHHHHHHS--SS
T ss_pred CChHHHHHHHHHHHHhcCCcEEEEE-ecC-----cccCHHHHHHHHhhhhhcccchhhcCCCccchhhhHHHHhhC--Cc
Confidence 3566655666666553 433 3333 211 123456677777777766665 32222334566677776542 12
Q ss_pred ccC----ccccHHHHhhhC------------CCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 133 NHN----LDTSREFYSKII------------TTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 133 ~i~----let~~~~~~~i~------------~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
.+. +.+..+..+.+. +-..+...++....|...|+.+..++ .++.=.....+.++..+.
T Consensus 241 pIa~dE~~~~~~~~~~~i~~~a~d~i~~d~~~~GGit~~~~ia~~A~~~gi~v~~h~----~~~~i~~aa~~h~~aa~~ 315 (378)
T 4hpn_A 241 PVAGGETWHGRYGMWQALSAGAVDILQPDLCGCGGFSEIQKIATLATLHGVRIVPHV----WGTGVQIAAALQFMAAMT 315 (378)
T ss_dssp CEEECTTCCHHHHHHHHHHTTCCSEECCBTTTTTHHHHHHHHHHHHHHHTCEECCBC----CSSHHHHHHHHHHHHHCC
T ss_pred eeeCCcCccchHhHHHHHHcCCCCEEeeCCeeCCChhHHHHHHHHHHHcCCeEEeCC----CCcHHHHHHHHHHHHHcC
Confidence 221 111112222211 12347778888888889998764442 233334455555555443
No 259
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=67.21 E-value=24 Score=32.85 Aligned_cols=70 Identities=16% Similarity=0.220 Sum_probs=47.9
Q ss_pred HHHHHHcCCCEEEEecccCC-C-------CCCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 65 AQKAKEAGSTRFCMGAAWRD-T-------IGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 65 ~~~~~~~g~~~i~l~~g~~~-~-------~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
++.+.+.|++.+.++.|... . .| ...+..+.++.+..++.++++....|..+.+.+.+...+|.+.+.++
T Consensus 311 a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g-~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GA~~V~vG 388 (511)
T 3usb_A 311 TKALIEAGANVVKVGIGPGSICTTRVVAGVG-VPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVKALAAGAHVVMLG 388 (511)
T ss_dssp HHHHHHHTCSEEEECSSCSTTCCHHHHHCCC-CCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHhCCCEEEECCCCccccccccccCCC-CCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHHhCchhheec
Confidence 34455678888877322111 0 01 22445556666666667899999999999999999999999999875
No 260
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=66.91 E-value=44 Score=28.43 Aligned_cols=106 Identities=10% Similarity=0.078 Sum_probs=63.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc--hhHHHHHHHHHHhhh---cCceEEEeCCC-CCHHH---HHHHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGM-LEKHQ---AIELKK 126 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~--~~~~~l~~~i~~~k~---~~~~i~~~~g~-l~~e~---l~~L~~ 126 (320)
++.+.+.+.++.+.+.|++.+++.|.+ ||- +..++-.++++...+ -.+++.+..|. -+.+. .+...+
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~Gtt----GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~ 94 (291)
T 3tak_A 19 VDWKSLEKLVEWHIEQGTNSIVAVGTT----GEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKD 94 (291)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESSTT----TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccc----cccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHh
Confidence 789999999999999999999875532 442 344555666665542 24666666665 33333 445567
Q ss_pred hccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeeeE
Q 020848 127 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGG 173 (320)
Q Consensus 127 aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~-~Gi~v~~~~ 173 (320)
+|.|.+.+..-.+ . +.+-+..++-.+...+ .++++-+.-
T Consensus 95 ~Gadavlv~~P~y----~----~~~~~~l~~~f~~ia~a~~lPiilYn 134 (291)
T 3tak_A 95 LGADAALLVTPYY----N----KPTQEGLYQHYKAIAEAVELPLILYN 134 (291)
T ss_dssp HTCSEEEEECCCS----S----CCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred cCCCEEEEcCCCC----C----CCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 7999887642111 1 1244555555555444 466654443
No 261
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=66.86 E-value=13 Score=33.65 Aligned_cols=23 Identities=13% Similarity=-0.008 Sum_probs=17.5
Q ss_pred CHHHHHHHHHHHHHcCCeeeeeE
Q 020848 151 SYDERLETLKHVREAGINVCSGG 173 (320)
Q Consensus 151 ~~~~~l~~i~~a~~~Gi~v~~~~ 173 (320)
.....++....|...|+.+.++.
T Consensus 317 Git~a~kia~~A~a~gi~v~~h~ 339 (412)
T 3stp_A 317 GITAAQKINAIAEAAQIPVIPHA 339 (412)
T ss_dssp HHHHHHHHHHHHHHHTCCBCCSS
T ss_pred CHHHHHHHHHHHHHcCCEEEecc
Confidence 36667788888888999876665
No 262
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=66.82 E-value=14 Score=32.90 Aligned_cols=41 Identities=27% Similarity=0.397 Sum_probs=24.9
Q ss_pred CHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcC
Q 020848 151 SYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 194 (320)
Q Consensus 151 ~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 194 (320)
.+...++....|...|+.+.++.++ ++.=-+...+.++..+
T Consensus 280 Git~~~~ia~~A~~~gi~~~~~~~~---es~i~~aa~~hlaaa~ 320 (381)
T 3fcp_A 280 GPNSVLALARVAQAAGIGLYGGTML---EGTVGTVASLHAWSTL 320 (381)
T ss_dssp STTHHHHHHHHHHHHTCEEEECCSC---CCHHHHHHHHHHHTTS
T ss_pred CHHHHHHHHHHHHHcCCceecCCCC---ccHHHHHHHHHHHHhC
Confidence 4566678888888889887544333 4444445555555443
No 263
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=66.79 E-value=11 Score=33.84 Aligned_cols=110 Identities=12% Similarity=0.119 Sum_probs=53.8
Q ss_pred CHHHHHHHHHHHHHc-CCC-EEEEecccCCCCCCchhHHHHHHHHHHhhhcCce-EEEeCCCCCHHHHHHHHHhccCeec
Q 020848 57 TKDAVMQAAQKAKEA-GST-RFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKAGLTAYN 133 (320)
Q Consensus 57 s~eei~~~~~~~~~~-g~~-~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~-i~~~~g~l~~e~l~~L~~aGld~v~ 133 (320)
++++-++.++.+++. |-. .+.+ .. + + ....++..++++.+.+.++. +.-....-+.+.+++|++. . .+.
T Consensus 201 ~~~~d~~~v~avR~a~G~~~~l~v-Da-N---~-~~~~~~A~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~-~-~iP 272 (390)
T 3ugv_A 201 DPAVDIETAEAVWDAVGRDTALMV-DF-N---Q-GLDMAEAMHRTRQIDDLGLEWIEEPVVYDNFDGYAQLRHD-L-KTP 272 (390)
T ss_dssp SHHHHHHHHHHHHHHHCTTSEEEE-EC-T---T-CCCHHHHHHHHHHHTTSCCSEEECCSCTTCHHHHHHHHHH-C-SSC
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEE-EC-C---C-CCCHHHHHHHHHHHHhhCCCEEECCCCcccHHHHHHHHHh-c-CCC
Confidence 455555556655553 432 3322 21 1 1 13346666677777666654 2211122345666677654 1 122
Q ss_pred cC----ccccHHHHhhhCC------------CCCHHHHHHHHHHHHHcCCeeeeeEE
Q 020848 134 HN----LDTSREFYSKIIT------------TRSYDERLETLKHVREAGINVCSGGI 174 (320)
Q Consensus 134 i~----let~~~~~~~i~~------------~~~~~~~l~~i~~a~~~Gi~v~~~~i 174 (320)
+. +.+..+..+.+.. -..+...++....|.+.|+.+.++.+
T Consensus 273 Ia~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~h~~ 329 (390)
T 3ugv_A 273 LMIGENFYGPREMHQALQAGACDLVMPDFMRIGGVSGWMRAAGVAGAWGIPMSTHLY 329 (390)
T ss_dssp EEECTTCCSHHHHHHHHHTTCCSEECCBHHHHTHHHHHHHHHHHHHHHTCCBCCBSC
T ss_pred EEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEeecCH
Confidence 22 2221122222111 12466777888888899998766543
No 264
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=66.79 E-value=20 Score=32.06 Aligned_cols=24 Identities=21% Similarity=0.246 Sum_probs=17.2
Q ss_pred CHHHHHHHHHHHHHcCCeeeeeEE
Q 020848 151 SYDERLETLKHVREAGINVCSGGI 174 (320)
Q Consensus 151 ~~~~~l~~i~~a~~~Gi~v~~~~i 174 (320)
.....++....|...|+.+..+.+
T Consensus 286 Git~a~kia~~A~~~gv~~~~h~~ 309 (388)
T 3tcs_A 286 GICRTLRVVEMARAAGLPVTPHCA 309 (388)
T ss_dssp SHHHHHHHHHHHHHTTCCBCCCCC
T ss_pred CHHHHHHHHHHHHHcCCEEEecCC
Confidence 466667777888888888766643
No 265
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=66.65 E-value=72 Score=29.01 Aligned_cols=22 Identities=32% Similarity=0.454 Sum_probs=16.4
Q ss_pred CHHHHHHHHHHHHHcCCeeeee
Q 020848 151 SYDERLETLKHVREAGINVCSG 172 (320)
Q Consensus 151 ~~~~~l~~i~~a~~~Gi~v~~~ 172 (320)
.....++....+...|+.+..+
T Consensus 335 Git~~~kia~lA~~~gv~v~~H 356 (441)
T 4a35_A 335 SVNENLSVLLMAKKFEIPVCPH 356 (441)
T ss_dssp HHHHHHHHHHHHHHTTCCBCCC
T ss_pred CHHHHHHHHHHHHHcCCEEEEe
Confidence 4677777888888888887655
No 266
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=66.53 E-value=55 Score=27.16 Aligned_cols=43 Identities=7% Similarity=0.210 Sum_probs=34.6
Q ss_pred HHHHHHHHHhhh-cCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 93 NQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 93 ~~l~~~i~~~k~-~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
+...+.++.+++ .++++.+..|.-+.+.+..+.++|.|.+.++
T Consensus 187 ~~~~~~i~~v~~~~~~pI~vgGGI~~~e~~~~~~~~GAdgvvVG 230 (262)
T 1rd5_A 187 PRVESLIQEVKKVTNKPVAVGFGISKPEHVKQIAQWGADGVIIG 230 (262)
T ss_dssp THHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEEC
T ss_pred chHHHHHHHHHhhcCCeEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 456667777774 4678888888778999999999999998876
No 267
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=66.52 E-value=16 Score=31.03 Aligned_cols=65 Identities=11% Similarity=0.009 Sum_probs=43.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhc--CceEEEeCCCCCHHHHHHHHHhccCeecc
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTLGMLEKHQAIELKKAGLTAYNH 134 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~--~~~i~~~~g~l~~e~l~~L~~aGld~v~i 134 (320)
+++|+.+.+ +.|++.|.+... ..+.+.++++.++.. ++++..+.|. +.+.+..+.++|+|.+.+
T Consensus 191 tlee~~~A~----~aGaD~I~ld~~---------~~~~l~~~v~~l~~~~~~~~i~AsGGI-~~~ni~~~~~aGaD~i~v 256 (273)
T 2b7n_A 191 SFEEAKNAM----NAGADIVMCDNL---------SVLETKEIAAYRDAHYPFVLLEASGNI-SLESINAYAKSGVDAISV 256 (273)
T ss_dssp SHHHHHHHH----HHTCSEEEEETC---------CHHHHHHHHHHHHHHCTTCEEEEESSC-CTTTHHHHHTTTCSEEEC
T ss_pred CHHHHHHHH----HcCCCEEEECCC---------CHHHHHHHHHHhhccCCCcEEEEECCC-CHHHHHHHHHcCCcEEEE
Confidence 556654443 468888877431 234555555555532 3677778775 999999999999999988
Q ss_pred C
Q 020848 135 N 135 (320)
Q Consensus 135 ~ 135 (320)
+
T Consensus 257 G 257 (273)
T 2b7n_A 257 G 257 (273)
T ss_dssp T
T ss_pred c
Confidence 6
No 268
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=66.52 E-value=26 Score=31.20 Aligned_cols=41 Identities=24% Similarity=0.263 Sum_probs=28.5
Q ss_pred CHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 151 SYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 151 ~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
.....++.+..|++.|+.+.++ + .++.-.+...+.+...++
T Consensus 272 Git~~~~i~~~A~~~g~~~~~~-~---~es~i~~~a~l~laa~~~ 312 (382)
T 2gdq_A 272 GIDEFRDCLQLARYFGVRASAH-A---YDGSLSRLYALFAQACLP 312 (382)
T ss_dssp HHHHHHHHHHHHHHHTCEECCC-C---SSCSHHHHHHHHHHHTSC
T ss_pred CHHHHHHHHHHHHHcCCEEeec-C---CCcHHHHHHHHHHHHhCc
Confidence 5778889999999999987766 3 345445556666655553
No 269
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=66.52 E-value=30 Score=32.23 Aligned_cols=126 Identities=16% Similarity=0.223 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhc--CceEEEeCCCCCHHHHHHHHHhccCeeccCcc
Q 020848 60 AVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTLGMLEKHQAIELKKAGLTAYNHNLD 137 (320)
Q Consensus 60 ei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~--~~~i~~~~g~l~~e~l~~L~~aGld~v~i~le 137 (320)
+..+.++.+.+.|++.+.+.+.. + ....+.+.++++++. ++.+..- +..+.+.++.+.++|+|.|.++..
T Consensus 256 d~~era~aLveaGvd~I~Id~a~----g---~~~~v~~~i~~i~~~~~~~~vi~g-~v~t~e~a~~~~~aGad~i~vg~g 327 (511)
T 3usb_A 256 DAMTRIDALVKASVDAIVLDTAH----G---HSQGVIDKVKEVRAKYPSLNIIAG-NVATAEATKALIEAGANVVKVGIG 327 (511)
T ss_dssp THHHHHHHHHHTTCSEEEEECSC----T---TSHHHHHHHHHHHHHCTTSEEEEE-EECSHHHHHHHHHHTCSEEEECSS
T ss_pred chHHHHHHHHhhccceEEecccc----c---chhhhhhHHHHHHHhCCCceEEee-eeccHHHHHHHHHhCCCEEEECCC
Confidence 34556777788899999886532 2 235677788888843 3554331 236889999999999999987543
Q ss_pred cc----HHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeC-CCHHHHHHHHHHHhcCCCCCCeeeee
Q 020848 138 TS----REFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLG-EAEEDRVGLLHTLATLPTHPESVPIN 204 (320)
Q Consensus 138 t~----~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glg-et~ed~~~~l~~l~~l~~~~~~v~~~ 204 (320)
.. ....... ...++..+.+..+.+.+.++++ |..-| .+.+|+.+.+. +| .+.+.+.
T Consensus 328 ~gsi~~~~~~~g~-g~p~~~~l~~v~~~~~~~~iPV----Ia~GGI~~~~di~kala----~G--A~~V~vG 388 (511)
T 3usb_A 328 PGSICTTRVVAGV-GVPQLTAVYDCATEARKHGIPV----IADGGIKYSGDMVKALA----AG--AHVVMLG 388 (511)
T ss_dssp CSTTCCHHHHHCC-CCCHHHHHHHHHHHHHTTTCCE----EEESCCCSHHHHHHHHH----TT--CSEEEES
T ss_pred CccccccccccCC-CCCcHHHHHHHHHHHHhCCCcE----EEeCCCCCHHHHHHHHH----hC--chhheec
Confidence 32 1222221 1223444445555555566553 33112 37777777654 45 4555553
No 270
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=66.49 E-value=53 Score=28.15 Aligned_cols=120 Identities=14% Similarity=0.199 Sum_probs=69.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc--hhHHHHHHHHHHhhh---cCceEEEeCCCC-CHHH---HHHHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGML-EKHQ---AIELKK 126 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~--~~~~~l~~~i~~~k~---~~~~i~~~~g~l-~~e~---l~~L~~ 126 (320)
++.+.+.+.++.+.+.|+..+++.|.+ ||- +..++-.++++.+.+ -.+++.+..|.. +.+. .+...+
T Consensus 29 iD~~~l~~lv~~li~~Gv~Gl~v~GtT----GE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~ 104 (303)
T 2wkj_A 29 LDKASLRRLVQFNIQQGIDGLYVGGST----GEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKR 104 (303)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESSTT----TTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECeec----cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHh
Confidence 789999999999999999999886532 443 344555555555442 247776666653 3444 444566
Q ss_pred hccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHH-cC-CeeeeeEEEEe-C--CCHHHHHHH
Q 020848 127 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AG-INVCSGGIIGL-G--EAEEDRVGL 187 (320)
Q Consensus 127 aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~-~G-i~v~~~~i~Gl-g--et~ed~~~~ 187 (320)
+|.|.+.+-.-.+ . +.+.+.+++-.+.+.+ .+ +++-+.-+.+. | -+.+.+.++
T Consensus 105 ~Gadavlv~~P~y----~----~~s~~~l~~~f~~va~a~~~lPiilYn~P~~tg~~l~~~~~~~L 162 (303)
T 2wkj_A 105 YGFDAVSAVTPFY----Y----PFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTL 162 (303)
T ss_dssp HTCSEEEEECCCS----S----CCCHHHHHHHHHHHHHHHTTCCEEEEECHHHHCCCCCHHHHHHH
T ss_pred CCCCEEEecCCCC----C----CCCHHHHHHHHHHHHHhCCCCCEEEEeCccccCCCCCHHHHHHH
Confidence 7999887643211 1 1244555555555443 35 77544333322 2 354444444
No 271
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=66.48 E-value=28 Score=31.36 Aligned_cols=79 Identities=8% Similarity=0.053 Sum_probs=53.4
Q ss_pred CCHHHHHHHHHHHHHcC------CCEEEEecccCCC-CCCch---hHH-HHHHHHHHhh-hcCceEEEeCCCCCHHHHHH
Q 020848 56 MTKDAVMQAAQKAKEAG------STRFCMGAAWRDT-IGRKT---NFN-QILEYVKDIR-DMGMEVCCTLGMLEKHQAIE 123 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g------~~~i~l~~g~~~~-~ge~~---~~~-~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~ 123 (320)
.+.++..+.++.+.+.| +..+.+.++.... ...|. ... .-.++++.+| ..++++..+.+. +.+.+++
T Consensus 257 ~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~iPvi~~G~i-~~~~a~~ 335 (402)
T 2hsa_B 257 NPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQGTFICSGGY-TRELGIE 335 (402)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCSSCEEEESSC-CHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCCCCEEEeCCC-CHHHHHH
Confidence 35678888888888888 9888887653211 00111 001 1256667777 457777777776 8899998
Q ss_pred HHHhc-cCeeccC
Q 020848 124 LKKAG-LTAYNHN 135 (320)
Q Consensus 124 L~~aG-ld~v~i~ 135 (320)
+.+.| +|.|.++
T Consensus 336 ~l~~g~aD~V~ig 348 (402)
T 2hsa_B 336 AVAQGDADLVSYG 348 (402)
T ss_dssp HHHTTSCSEEEES
T ss_pred HHHCCCCceeeec
Confidence 88887 8988886
No 272
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=66.31 E-value=16 Score=31.68 Aligned_cols=113 Identities=17% Similarity=0.182 Sum_probs=61.3
Q ss_pred CCHHHHHHHH----HHHHHcCCCE-EEEec-ccCCCCCCchhHHHHHHHHHHhhhcCce---EEEeCCCCCHHHHHHHHH
Q 020848 56 MTKDAVMQAA----QKAKEAGSTR-FCMGA-AWRDTIGRKTNFNQILEYVKDIRDMGME---VCCTLGMLEKHQAIELKK 126 (320)
Q Consensus 56 ~s~eei~~~~----~~~~~~g~~~-i~l~~-g~~~~~ge~~~~~~l~~~i~~~k~~~~~---i~~~~g~l~~e~l~~L~~ 126 (320)
++.+|.++.+ +.+++.|..- +.+.. .+.+..+ ....+++.++++.+.+.|.. +.-|.|.++++.+.+|.+
T Consensus 115 ~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~ 193 (307)
T 1ydo_A 115 KSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEK-DVPIEQVIRLSEALFEFGISELSLGDTIGAANPAQVETVLE 193 (307)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTB-CCCHHHHHHHHHHHHHHTCSCEEEECSSCCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCC-CCCHHHHHHHHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHH
Confidence 5666654444 4556677642 22321 1122222 34567888888888876654 455788888888777655
Q ss_pred hccCe---eccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCC
Q 020848 127 AGLTA---YNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGE 179 (320)
Q Consensus 127 aGld~---v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glge 179 (320)
.=... +.+++ +...++..-+.+.-.+.++|...-=..+.|+|+
T Consensus 194 ~l~~~~~~~~l~~----------H~Hnd~Gla~AN~laAv~aGa~~vd~tv~GlGe 239 (307)
T 1ydo_A 194 ALLARFPANQIAL----------HFHDTRGTALANMVTALQMGITVFDGSAGGLGG 239 (307)
T ss_dssp HHHTTSCGGGEEE----------ECBGGGSCHHHHHHHHHHHTCCEEEEBGGGCCE
T ss_pred HHHHhCCCCeEEE----------EECCCCchHHHHHHHHHHhCCCEEEEcccccCC
Confidence 41222 23333 222233333555566677788743344555654
No 273
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=66.30 E-value=64 Score=27.80 Aligned_cols=203 Identities=12% Similarity=0.137 Sum_probs=104.3
Q ss_pred HHHHHcCCCEEEEec------ccCCCCCCchhHHHHHHHHHHhh-hcCceEEE--eCCCCC----HHHHHHHHHhccCee
Q 020848 66 QKAKEAGSTRFCMGA------AWRDTIGRKTNFNQILEYVKDIR-DMGMEVCC--TLGMLE----KHQAIELKKAGLTAY 132 (320)
Q Consensus 66 ~~~~~~g~~~i~l~~------g~~~~~ge~~~~~~l~~~i~~~k-~~~~~i~~--~~g~l~----~e~l~~L~~aGld~v 132 (320)
+.+.+.|++-++++| -+.+..+ +..+++++..++.+. ..++++.+ ..|.-+ .+.++.|.++|+..|
T Consensus 43 ~l~e~aG~dai~vs~~s~a~~~G~pD~~-~vt~~em~~~~~~I~r~~~~pviaD~d~Gyg~~~~v~~~v~~l~~aGaagv 121 (305)
T 3ih1_A 43 LVARNTGFLALYLSGAAYTASKGLPDLG-IVTSTEVAERARDLVRATDLPVLVDIDTGFGGVLNVARTAVEMVEAKVAAV 121 (305)
T ss_dssp HHHHHTTCSCEEECHHHHHHHHTCCSSS-CSCHHHHHHHHHHHHHHHCCCEEEECTTCSSSHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHcCCCEEEECcHHHHHhCCCCCCC-cCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCHHHHHHHHHHHHHhCCcEE
Confidence 334457998888876 1233322 467888888888876 34555433 345433 345788889999988
Q ss_pred ccCccccHHHHhhhCC--CCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCC-----HHHHHHHHHHHhcCCCCCCeeeeee
Q 020848 133 NHNLDTSREFYSKIIT--TRSYDERLETLKHVREAGINVCSGGIIGLGEA-----EEDRVGLLHTLATLPTHPESVPINA 205 (320)
Q Consensus 133 ~i~let~~~~~~~i~~--~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget-----~ed~~~~l~~l~~l~~~~~~v~~~~ 205 (320)
.+-=+..+.....+.. -.+.++..+.|+.++++|.++ +|++..+. .++..+-.+.+.+.| .+.|
T Consensus 122 ~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~~~~---~I~ARtda~~~~g~~~ai~Ra~ay~eAG--AD~i---- 192 (305)
T 3ih1_A 122 QIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVAPSL---YIVARTDARGVEGLDEAIERANAYVKAG--ADAI---- 192 (305)
T ss_dssp EEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHCTTS---EEEEEECCHHHHCHHHHHHHHHHHHHHT--CSEE----
T ss_pred EECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcCCCe---EEEEeeccccccCHHHHHHHHHHHHHcC--CCEE----
Confidence 8643322111111111 126778888888888886542 34555444 344444444455556 4443
Q ss_pred eeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeec-CCcc-cccChhHHHHHHHcCCceEeeCCccccCCCCChhHH
Q 020848 206 LLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRL-SAGR-VRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDAD 283 (320)
Q Consensus 206 ~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~-~~g~-~~~~~~~~~~~~~~Gan~~~~~~~~~~~~~~~~~~~ 283 (320)
|.+ + .++.+++.++.+... .|- .... ..|. ..+.. ...-..|.+.++.+.......-....+.
T Consensus 193 ~~e--~-------~~~~~~~~~i~~~~~--~P~-~~n~~~~g~tp~~~~---~eL~~lGv~~v~~~~~~~raa~~a~~~~ 257 (305)
T 3ih1_A 193 FPE--A-------LQSEEEFRLFNSKVN--APL-LANMTEFGKTPYYSA---EEFANMGFQMVIYPVTSLRVAAKAYENV 257 (305)
T ss_dssp EET--T-------CCSHHHHHHHHHHSC--SCB-EEECCTTSSSCCCCH---HHHHHTTCSEEEECSHHHHHHHHHHHHH
T ss_pred EEc--C-------CCCHHHHHHHHHHcC--CCE-EEeecCCCCCCCCCH---HHHHHcCCCEEEEchHHHHHHHHHHHHH
Confidence 222 1 124555444333221 121 1122 2221 12221 1222468888877753333223345556
Q ss_pred HHHHHHcCCC
Q 020848 284 QLMFKVLGLT 293 (320)
Q Consensus 284 ~~~i~~~G~~ 293 (320)
.+-|++.|-.
T Consensus 258 ~~~i~~~g~~ 267 (305)
T 3ih1_A 258 FTLIKETGSQ 267 (305)
T ss_dssp HHHHHHHSSC
T ss_pred HHHHHhcCCc
Confidence 6666666654
No 274
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=66.06 E-value=44 Score=29.25 Aligned_cols=128 Identities=10% Similarity=-0.007 Sum_probs=66.8
Q ss_pred CCCCHHHHHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEE--EEeC----------CCH
Q 020848 114 GMLEKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGI--IGLG----------EAE 181 (320)
Q Consensus 114 g~l~~e~l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i--~Glg----------et~ 181 (320)
|...++.++.+++.|++.|.+.+.-. .+........++.+-+.++.|.+.|+.+-+++- -+.. .+.
T Consensus 84 g~~~~~di~~ik~~G~N~VRi~~~~~--~~~~~~~~~~l~~ld~~v~~a~~~Gi~Vild~H~~~~~~~~~~~~~~~~~~~ 161 (359)
T 4hty_A 84 KRFSKKHFEVIRSWGANVVRVPVHPR--AWKERGVKGYLELLDQVVAWNNELGIYTILDWHSIGNLKSEMFQNNSYHTTK 161 (359)
T ss_dssp TCCSHHHHHHHHHTTCSEEEEEECHH--HHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCEEETTTTEESSGGGCCCH
T ss_pred CCcCHHHHHHHHhcCCCEEEEeccHH--HhhccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCCCCCCcccccCCcchhHH
Confidence 44568899999999999988865321 111111112355667788889999998655542 2210 235
Q ss_pred HHHHHHHHHH-hcCCCCCCeeeeeeeeecCCCCCCCCCCCCHHH----HHHHHHHHHHhCCCceeecC
Q 020848 182 EDRVGLLHTL-ATLPTHPESVPINALLAVKGTPLQDQKPVEIWE----MIRMIATARIVMPKAMVRLS 244 (320)
Q Consensus 182 ed~~~~l~~l-~~l~~~~~~v~~~~~~p~~gt~~~~~~~~~~~e----~~~~~a~~R~~~p~~~i~~~ 244 (320)
+...+.++.+ .+.+.++ .|-...+.-.|..........+... +.+++...|..-|+..+.+.
T Consensus 162 ~~~~~~~~~la~ryk~~p-~Vi~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~~~IR~~dp~~~I~v~ 228 (359)
T 4hty_A 162 GETFDFWRRVSERYNGIN-SVAFYEIFNEPTVFNGRLGIATWAEWKAINEEAITIIQAHNPKAIALVA 228 (359)
T ss_dssp HHHHHHHHHHHHHTTTCT-TEEEEESCSEECCGGGTTCCCCHHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHHHHHHHHHHHhCCCC-cEEEEEeccCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCcEEEEc
Confidence 5566665544 3443223 3333333322321111111223322 23345566777787665553
No 275
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=66.03 E-value=17 Score=32.67 Aligned_cols=44 Identities=9% Similarity=-0.063 Sum_probs=26.9
Q ss_pred CCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 150 RSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
......++....|...|+.+.++... .++.=-+...+.++..++
T Consensus 287 GGit~~~kia~~A~~~gi~~~~h~~~--~~s~i~~aA~~hlaaa~p 330 (401)
T 3sbf_A 287 GGITPALKLGHLCQNFGVRIAWHCAP--DMTPIGAAVNTHLNVHLH 330 (401)
T ss_dssp TSHHHHHHHHHHHHHHTCEECCCCCT--TSCHHHHHHHHHHHHHST
T ss_pred CCHHHHHHHHHHHHHcCCEEEecCCc--ccchHHHHHHHHHHHhCC
Confidence 35777788888888889887655432 124334455555555553
No 276
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=65.88 E-value=5.5 Score=34.19 Aligned_cols=65 Identities=12% Similarity=0.199 Sum_probs=43.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhc--CceEEEeCCCCCHHHHHHHHHhccCeecc
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTLGMLEKHQAIELKKAGLTAYNH 134 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~--~~~i~~~~g~l~~e~l~~L~~aGld~v~i 134 (320)
++||+.+ +.+.|++.|.+-. ...+.+.+.++.++.. .+.+.++.| ++.+.++.+.+.|+|.|.+
T Consensus 202 tleea~e----A~~aGaD~I~LDn---------~~~e~l~~av~~l~~~~~~v~ieASGG-It~eni~~~a~tGVD~Isv 267 (285)
T 1o4u_A 202 NLEDALR----AVEAGADIVMLDN---------LSPEEVKDISRRIKDINPNVIVEVSGG-ITEENVSLYDFETVDVISS 267 (285)
T ss_dssp SHHHHHH----HHHTTCSEEEEES---------CCHHHHHHHHHHHHHHCTTSEEEEEEC-CCTTTGGGGCCTTCCEEEE
T ss_pred CHHHHHH----HHHcCCCEEEECC---------CCHHHHHHHHHHhhccCCCceEEEECC-CCHHHHHHHHHcCCCEEEE
Confidence 4555444 4557888776642 2335566666666542 456666655 7889999999999999987
Q ss_pred C
Q 020848 135 N 135 (320)
Q Consensus 135 ~ 135 (320)
+
T Consensus 268 G 268 (285)
T 1o4u_A 268 S 268 (285)
T ss_dssp G
T ss_pred e
Confidence 6
No 277
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=65.83 E-value=15 Score=32.71 Aligned_cols=37 Identities=19% Similarity=0.162 Sum_probs=21.6
Q ss_pred CHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHH
Q 020848 151 SYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHT 190 (320)
Q Consensus 151 ~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~ 190 (320)
.....++....|.+.|+.+.++.++ ++.=.+...+.+
T Consensus 275 Gi~~~~~ia~~A~~~gi~~~~~~~~---es~i~~aa~~hl 311 (379)
T 3r0u_A 275 GILEAQKIKKLADSAGISCMVGCMM---ESPAGILATASF 311 (379)
T ss_dssp SHHHHHHHHHHHHHTTCEEEECCCS---CCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEeCCC---ccHHHHHHHHHH
Confidence 4666677777788888876555433 343334444433
No 278
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=65.65 E-value=37 Score=29.03 Aligned_cols=39 Identities=18% Similarity=0.198 Sum_probs=20.3
Q ss_pred HHHHHHcCCceEeeCCcccc-CCC---CChhHHHHHHHHcCCC
Q 020848 255 QALCFLAGANSIFTGEKLLT-TPN---NDFDADQLMFKVLGLT 293 (320)
Q Consensus 255 ~~~~~~~Gan~~~~~~~~~~-~~~---~~~~~~~~~i~~~G~~ 293 (320)
....+.+||+.++.|..++. .+. .-.++..+.+.+.|+.
T Consensus 257 a~~~l~~GAd~V~vg~~~l~~~p~~~~~i~~~l~~~l~~~g~~ 299 (311)
T 1jub_A 257 AFEHLLCGATMLQIGTALHKEGPAIFDRIIKELEEIMNQKGYQ 299 (311)
T ss_dssp HHHHHHHTCSEEEECHHHHHHCTHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHcCCCEEEEchHHHhcCcHHHHHHHHHHHHHHHHcCCC
Confidence 34456678887777654443 111 0123344556666664
No 279
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=65.62 E-value=34 Score=30.36 Aligned_cols=70 Identities=14% Similarity=0.062 Sum_probs=44.4
Q ss_pred HHHHHHcCCCEEEEecc-cCCCCCCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 65 AQKAKEAGSTRFCMGAA-WRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 65 ~~~~~~~g~~~i~l~~g-~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
++.+.+.|++.|.+++. ++...+.+..++.+.++.+.++. ++++..+.|..+.+.+.++..+|.|.|.++
T Consensus 239 a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~-~ipvia~GGI~~~~D~~k~l~~GAdaV~iG 309 (370)
T 1gox_A 239 ARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQG-RIPVFLDGGVRRGTDVFKALALGAAGVFIG 309 (370)
T ss_dssp HHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTT-SSCEEEESSCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCC-CCEEEEECCCCCHHHHHHHHHcCCCEEeec
Confidence 34456689998888542 22211212333334443333321 578888999989888888888999999886
No 280
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=65.30 E-value=73 Score=28.10 Aligned_cols=119 Identities=14% Similarity=0.123 Sum_probs=80.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHhccCeecc
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAGLTAYNH 134 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i 134 (320)
.+.+..++.+..+.+.|.+-+-+.- |. ++-.+.++.++ ...+++.... .++...+..-.++|+|.+.+
T Consensus 43 ~D~~atv~Qi~~l~~aG~diVRvav--------p~--~~~a~al~~I~~~~~vPlvaDi-Hf~~~lal~a~e~G~dklRI 111 (366)
T 3noy_A 43 HDVEATLNQIKRLYEAGCEIVRVAV--------PH--KEDVEALEEIVKKSPMPVIADI-HFAPSYAFLSMEKGVHGIRI 111 (366)
T ss_dssp TCHHHHHHHHHHHHHTTCCEEEEEC--------CS--HHHHHHHHHHHHHCSSCEEEEC-CSCHHHHHHHHHTTCSEEEE
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCC--------CC--hHHHHHHHHHHhcCCCCEEEeC-CCCHHHHHHHHHhCCCeEEE
Confidence 6789999999999999998876642 11 23357777777 4566654432 26677777778899998877
Q ss_pred CccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEe----------CCCHHHH----HHHHHHHhcCC
Q 020848 135 NLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL----------GEAEEDR----VGLLHTLATLP 195 (320)
Q Consensus 135 ~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl----------get~ed~----~~~l~~l~~l~ 195 (320)
+---. .+-+++.+.++.+++.|+.+.+++=-|. +.+.+.+ .+.++.+.+++
T Consensus 112 NPGNi----------g~~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~yg~~~~eamVeSAl~~~~~~e~~g 176 (366)
T 3noy_A 112 NPGNI----------GKEEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLEKYGYPSAEALAESALRWSEKFEKWG 176 (366)
T ss_dssp CHHHH----------SCHHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHSSCCHHHHHHHHHHHHHHHHHTT
T ss_pred CCccc----------CchhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHhCC
Confidence 53211 1345567788899999998877654442 2465554 44566777776
No 281
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=65.28 E-value=43 Score=28.73 Aligned_cols=71 Identities=13% Similarity=0.116 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeCC---CCCHHHHHHHHHhccCeecc
Q 020848 58 KDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLG---MLEKHQAIELKKAGLTAYNH 134 (320)
Q Consensus 58 ~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g---~l~~e~l~~L~~aGld~v~i 134 (320)
.+++++.++.+.+.|+..+++-++. | ..+.+.++.+.++. .+++..+.+ ..+ .++|.++|+.++.+
T Consensus 169 ~~~ai~Ra~ay~eAGAd~i~~e~~~------~-~~~~~~~i~~~~~~-~~P~i~~~~~~~~~~---~~eL~~lGv~~v~~ 237 (295)
T 1s2w_A 169 LDEALKRAEAYRNAGADAILMHSKK------A-DPSDIEAFMKAWNN-QGPVVIVPTKYYKTP---TDHFRDMGVSMVIW 237 (295)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCS------S-SSHHHHHHHHHHTT-CSCEEECCSTTTTSC---HHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCC------C-CHHHHHHHHHHcCC-CCCEEEeCCCCCCCC---HHHHHHcCCcEEEE
Confidence 5777777777777777777663210 0 12333344444331 134333322 222 66777777777777
Q ss_pred Ccccc
Q 020848 135 NLDTS 139 (320)
Q Consensus 135 ~let~ 139 (320)
+...+
T Consensus 238 ~~~~~ 242 (295)
T 1s2w_A 238 ANHNL 242 (295)
T ss_dssp CSHHH
T ss_pred ChHHH
Confidence 66443
No 282
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=65.25 E-value=11 Score=34.36 Aligned_cols=43 Identities=7% Similarity=-0.021 Sum_probs=27.7
Q ss_pred CHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 151 SYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 151 ~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
.....++....|.+.|+.+.++.+. .++.=-+...+.++..++
T Consensus 314 Git~~~~ia~~A~~~gi~~~~h~~~--~~s~ig~aA~~hlaaa~p 356 (425)
T 3vcn_A 314 GITNLKKIAAFADLHHVKTGCHGAT--DLSPVTMAAALHFDMSIT 356 (425)
T ss_dssp HHHHHHHHHHHHGGGTCEECCCCCT--TSCHHHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHcCCEEeeccCC--cccHHHHHHHHHHHHhCC
Confidence 4777788888899999887655442 134444555666655553
No 283
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=65.18 E-value=12 Score=33.94 Aligned_cols=101 Identities=8% Similarity=-0.022 Sum_probs=51.3
Q ss_pred hHHHHHHHHHHhhhcCce-EEEeCCCCCHHHHHHHHHhccCeeccC----ccc---cHHHHhh-----h----CCCCCHH
Q 020848 91 NFNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKAGLTAYNHN----LDT---SREFYSK-----I----ITTRSYD 153 (320)
Q Consensus 91 ~~~~l~~~i~~~k~~~~~-i~~~~g~l~~e~l~~L~~aGld~v~i~----let---~~~~~~~-----i----~~~~~~~ 153 (320)
..++..++++.+.+.++. +.-....-+.+.+++|++. + .+.+. +.+ +.+..+. + .+-....
T Consensus 238 ~~~~A~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~-~-~iPIa~dE~~~~~~~~~~~i~~ga~d~v~~k~~~~GGit 315 (424)
T 3v3w_A 238 TPIEAARLGKALEPYHLFWMEDAVPAENQESFKLIRQH-T-TTPLAVGEVFNSIHDCRELIQNQWIDYIRTTIVHAGGIS 315 (424)
T ss_dssp CHHHHHHHHHHHGGGCCSEEECCSCCSSTTHHHHHHHH-C-CSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTTTHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEECCCChHhHHHHHHHHhh-C-CCCEEEccCcCCHHHHHHHHHcCCCCeEeecchhcCCHH
Confidence 456667777777666654 2211122244556666654 1 12221 111 1122211 1 1123477
Q ss_pred HHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 154 ERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 154 ~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
..++....|...|+.+.++... .++.=-+...+.++..++
T Consensus 316 ~~~~ia~~A~~~gi~~~~h~~~--~~s~ig~aA~~hlaaa~p 355 (424)
T 3v3w_A 316 QMRRIADFASLFHVRTGFHGAT--DLSPVCMGAALHFDYWVP 355 (424)
T ss_dssp HHHHHHHHHHTTTCEEEECCCT--TSCHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHcCCEEEecCCC--cccHHHHHHHHHHHHhCC
Confidence 7788888888899887555432 134444555566655553
No 284
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=65.18 E-value=11 Score=34.20 Aligned_cols=43 Identities=9% Similarity=-0.082 Sum_probs=27.8
Q ss_pred CHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 151 SYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 151 ~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
.+...++....|...|+.+.++.+. .++.=-+...+.++..++
T Consensus 307 Git~~~~ia~~A~~~gi~~~~h~~~--~~s~ig~aA~~hlaaa~p 349 (418)
T 3r4e_A 307 GLTHLRRIADLASLYQVRTGCHGPT--DLSPVTMGCALHFDTWVP 349 (418)
T ss_dssp HHHHHHHHHHHHHHTTCEEEECCCT--TSCHHHHHHHHHHHHHCT
T ss_pred CHHHHHHHHHHHHHcCCEEeecCCC--CccHHHHHHHHHHHHhCC
Confidence 5777888888899999987655442 134444555565555553
No 285
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=65.13 E-value=13 Score=33.12 Aligned_cols=42 Identities=14% Similarity=0.115 Sum_probs=28.1
Q ss_pred CHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 151 SYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 151 ~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
.+...++....+.+.|+.+.++.++ ++.=-+...+.++..++
T Consensus 278 Git~~~~i~~~a~~~gi~~~~~~~~---es~i~~aa~~hlaaa~~ 319 (377)
T 3my9_A 278 GLMKAQSLMAIADTAGLPGYGGTLW---EGGIALAAGTQLIAATP 319 (377)
T ss_dssp SHHHHHHHHHHHHHHTCCEECCEEC---CSHHHHHHHHHHHHTCT
T ss_pred CHHHHHHHHHHHHHcCCeEecCCCC---CcHHHHHHHHHHHHhCC
Confidence 5777888888999999987555444 44444555565555553
No 286
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=65.10 E-value=25 Score=31.62 Aligned_cols=57 Identities=11% Similarity=0.060 Sum_probs=40.2
Q ss_pred CCHHHHHHHHHhccCeeccCccccHHHHhhh--CC--CCCHHHHHHHHHHHHHcCCeeeeeEE
Q 020848 116 LEKHQAIELKKAGLTAYNHNLDTSREFYSKI--IT--TRSYDERLETLKHVREAGINVCSGGI 174 (320)
Q Consensus 116 l~~e~l~~L~~aGld~v~i~let~~~~~~~i--~~--~~~~~~~l~~i~~a~~~Gi~v~~~~i 174 (320)
++++.++.|+++|++.|.+.+.--. +... .+ ...++.+-+.++.|++.|+.|-+++-
T Consensus 74 ite~D~~~ik~~G~N~VRipi~~~~--~~~~~~~py~~~~~~~ld~vV~~a~~~Gl~VILDlH 134 (399)
T 3n9k_A 74 ITEQDFKQISNLGLNFVRIPIGYWA--FQLLDNDPYVQGQVQYLEKALGWARKNNIRVWIDLH 134 (399)
T ss_dssp SCHHHHHHHHHTTCCEEEEEEEGGG--TCCCTTCCCCCCHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CcHHHHHHHHHcCCCEEEEcccHHH--ccCCCCCccchhHHHHHHHHHHHHHHCCCEEEEEec
Confidence 6889999999999999888763210 0000 01 12577888899999999999766653
No 287
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=65.00 E-value=45 Score=28.46 Aligned_cols=122 Identities=11% Similarity=-0.007 Sum_probs=71.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc--hhHHHHHHHHHHhhhc---CceEEEeCCCC-CHHH---HHHHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRDM---GMEVCCTLGML-EKHQ---AIELKK 126 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~--~~~~~l~~~i~~~k~~---~~~i~~~~g~l-~~e~---l~~L~~ 126 (320)
++.+.+.+.++.+.+.|+..+++.|.+ ||- +..++-.++++.+.+. .+++.+..|.. +.+. .+...+
T Consensus 21 iD~~~l~~lv~~li~~Gv~gl~~~Gtt----GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~ 96 (294)
T 3b4u_A 21 VDIDAMIAHARRCLSNGCDSVTLFGTT----GEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALN 96 (294)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESSTT----TTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHh
Confidence 789999999999999999999886532 442 4456666666665532 35665555553 3444 444566
Q ss_pred hccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHH-c---CCeeeeeEEEEe---CCCHHHHHHHH
Q 020848 127 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-A---GINVCSGGIIGL---GEAEEDRVGLL 188 (320)
Q Consensus 127 aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~-~---Gi~v~~~~i~Gl---get~ed~~~~l 188 (320)
+|.|.+.+..-.+ . +..+-+..++-.+...+ . ++++-+.-+-+. .-+.+.+.++.
T Consensus 97 ~Gadavlv~~P~y----~---~~~s~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l~~~~~~~La 158 (294)
T 3b4u_A 97 AGARNILLAPPSY----F---KNVSDDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLK 158 (294)
T ss_dssp TTCSEEEECCCCS----S---CSCCHHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred cCCCEEEEcCCcC----C---CCCCHHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcCCCHHHHHHHH
Confidence 7999887643221 1 10245555666655444 3 677544333322 33555554443
No 288
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=64.91 E-value=37 Score=27.83 Aligned_cols=71 Identities=13% Similarity=0.085 Sum_probs=41.7
Q ss_pred HHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHH-HhccCeeccC
Q 020848 62 MQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELK-KAGLTAYNHN 135 (320)
Q Consensus 62 ~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~-~aGld~v~i~ 135 (320)
.+.++.+.+.|+++|+ ++|+.....-....+.|.++++.... .++++.-.| ++.+.+..|. ..|++.+..+
T Consensus 136 ~~ale~L~~lGv~rIL-TSG~~~~~~a~~g~~~L~~Lv~~a~~-ri~Im~GgG-V~~~Ni~~l~~~tGv~e~H~s 207 (224)
T 2bdq_A 136 KKSIDQLVALGFTRIL-LHGSSNGEPIIENIKHIKALVEYANN-RIEIMVGGG-VTAENYQYICQETGVKQAHGT 207 (224)
T ss_dssp HHHHHHHHHTTCCEEE-ECSCSSCCCGGGGHHHHHHHHHHHTT-SSEEEECSS-CCTTTHHHHHHHHTCCEEEET
T ss_pred HHHHHHHHHcCCCEEE-CCCCCCCCcHHHHHHHHHHHHHhhCC-CeEEEeCCC-CCHHHHHHHHHhhCCCEEccc
Confidence 4446666778998886 44433321112355666666664332 466655545 5566666665 6799888765
No 289
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=64.89 E-value=67 Score=27.52 Aligned_cols=105 Identities=17% Similarity=0.197 Sum_probs=62.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc--hhHHHHHHHHHHhhh---cCceEEEeCCCC-CHHH---HHHHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGML-EKHQ---AIELKK 126 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~--~~~~~l~~~i~~~k~---~~~~i~~~~g~l-~~e~---l~~L~~ 126 (320)
++.+.+.+.++.+.+.|++.+++.|.+ ||- +..++-.++++.+.+ -.+++.+..|.. +.+. .+...+
T Consensus 34 iD~~~l~~lv~~li~~Gv~gl~v~Gtt----GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~ 109 (304)
T 3cpr_A 34 IDIAAGREVAAYLVDKGLDSLVLAGTT----GESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAAS 109 (304)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTT----TTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHh
Confidence 789999999999999999999885532 332 344555555555442 246776666653 3444 444566
Q ss_pred hccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeee
Q 020848 127 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSG 172 (320)
Q Consensus 127 aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~-~Gi~v~~~ 172 (320)
+|.|.+.+..-. |. +.+-+..++-.+...+ .++++-+.
T Consensus 110 ~Gadavlv~~P~----y~----~~~~~~l~~~f~~ia~a~~lPiilY 148 (304)
T 3cpr_A 110 AGADGLLVVTPY----YS----KPSQEGLLAHFGAIAAATEVPICLY 148 (304)
T ss_dssp TTCSEEEEECCC----SS----CCCHHHHHHHHHHHHHHCCSCEEEE
T ss_pred cCCCEEEECCCC----CC----CCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 799987764211 11 1244555555555443 46665433
No 290
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=64.81 E-value=16 Score=32.55 Aligned_cols=99 Identities=13% Similarity=0.171 Sum_probs=50.2
Q ss_pred hHHHHHHHHHHhhhcCce-EEEeCCCCCHHHHHHHHHhccCeeccC----ccccHHHHhhhC------------CCCCHH
Q 020848 91 NFNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKAGLTAYNHN----LDTSREFYSKII------------TTRSYD 153 (320)
Q Consensus 91 ~~~~l~~~i~~~k~~~~~-i~~~~g~l~~e~l~~L~~aGld~v~i~----let~~~~~~~i~------------~~~~~~ 153 (320)
..++..++++.+.+.++. +.-....-+.+.+++|++. . .+.+. +.+..+..+.+. +-....
T Consensus 206 ~~~~A~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~-~-~ipIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit 283 (382)
T 3dgb_A 206 DEAVALRACRILGGNGIDLIEQPISRNNRAGMVRLNAS-S-PAPIMADESIECVEDAFNLAREGAASVFALKIAKNGGPR 283 (382)
T ss_dssp CHHHHHHHHHHHHTTTCCCEECCBCTTCHHHHHHHHHH-C-SSCEEESTTCSSHHHHHHHHHHTCCSEEEECHHHHTSHH
T ss_pred CHHHHHHHHHHHhhcCcCeeeCCCCccCHHHHHHHHHh-C-CCCEEeCCCcCCHHHHHHHHHcCCCCEEEecccccCCHH
Confidence 345666667777665554 2211122356666677664 1 12221 112112211111 113577
Q ss_pred HHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcC
Q 020848 154 ERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 194 (320)
Q Consensus 154 ~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 194 (320)
..++....|...|+.+.++.++ ++.=-+...+.++..+
T Consensus 284 ~~~~i~~~A~~~gi~~~~~~~~---es~ig~aa~~hlaaa~ 321 (382)
T 3dgb_A 284 ATLRTAAIAEAAGIGLYGGTML---EGGIGTLASAHAFLTL 321 (382)
T ss_dssp HHHHHHHHHHHHTCEEEECCSC---CCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHcCCeEeecCCC---ccHHHHHHHHHHHHcC
Confidence 7788888888899887444333 4444455555555544
No 291
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=64.80 E-value=41 Score=29.08 Aligned_cols=106 Identities=11% Similarity=0.042 Sum_probs=63.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc--hhHHHHHHHHHHhhh---cCceEEEeCCC-CCHH---HHHHHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGM-LEKH---QAIELKK 126 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~--~~~~~l~~~i~~~k~---~~~~i~~~~g~-l~~e---~l~~L~~ 126 (320)
++.+.+.+.++.+.+.|++.+++.|.+ ||- +..++-.++++.+.+ -.+++.+..|. -+.+ ..+...+
T Consensus 40 iD~~~l~~li~~li~~Gv~Gl~v~GtT----GE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~ 115 (315)
T 3si9_A 40 IDEKAFCNFVEWQITQGINGVSPVGTT----GESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEK 115 (315)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEECSSTT----TTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccc----cCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHh
Confidence 789999999999999999999875532 443 345555566655542 24666666664 3343 3445567
Q ss_pred hccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeeeE
Q 020848 127 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGG 173 (320)
Q Consensus 127 aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~-~Gi~v~~~~ 173 (320)
+|.|.+.+-.-. |. +.+-+..++-.+.+.+ .++++-+.-
T Consensus 116 ~Gadavlv~~P~----y~----~~~~~~l~~~f~~va~a~~lPiilYn 155 (315)
T 3si9_A 116 AGADAVLVVTPY----YN----RPNQRGLYTHFSSIAKAISIPIIIYN 155 (315)
T ss_dssp TTCSEEEEECCC----SS----CCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred cCCCEEEECCCC----CC----CCCHHHHHHHHHHHHHcCCCCEEEEe
Confidence 799987763211 11 1234455555555443 466654443
No 292
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=64.73 E-value=67 Score=27.49 Aligned_cols=137 Identities=16% Similarity=0.084 Sum_probs=75.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCC--c---hhHHHHHHHHHHhhhc--C--ceEEEeCCCCCHHH-HH---
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGR--K---TNFNQILEYVKDIRDM--G--MEVCCTLGMLEKHQ-AI--- 122 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge--~---~~~~~l~~~i~~~k~~--~--~~i~~~~g~l~~e~-l~--- 122 (320)
.+.+.-+.+++.+.+.|+++|-++-. .|. . ..++.+.+-|+.+++. + +.+.+..+.|+.++ +.
T Consensus 97 ~~~e~K~~Ea~~Av~~GAdEIDmVin----ig~lk~~~~g~~~~V~~eI~~v~~a~~~~~lKVIlEt~~Lt~~e~i~~A~ 172 (297)
T 4eiv_A 97 GTPDTVSLEAVGALKDGADEIECLID----WRRMNENVADGESRIRLLVSEVKKVVGPKTLKVVLSGGELQGGDIISRAA 172 (297)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECC----THHHHHCHHHHHHHHHHHHHHHHHHHTTSEEEEECCSSCCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeeee----HHHHhcccCCcHHHHHHHHHHHHHHhcCCceEEEEecccCCcHHHHHHHH
Confidence 56788888899999999999987631 111 1 2455666666666632 2 45677778876444 33
Q ss_pred -HHHHhccCeeccC--ccccHHHHhhhCCCCCHHHH-------------------HHHHHHHHHcCCeeeeeEEEEeCCC
Q 020848 123 -ELKKAGLTAYNHN--LDTSREFYSKIITTRSYDER-------------------LETLKHVREAGINVCSGGIIGLGEA 180 (320)
Q Consensus 123 -~L~~aGld~v~i~--let~~~~~~~i~~~~~~~~~-------------------l~~i~~a~~~Gi~v~~~~i~Glget 180 (320)
.-.++|.|.|--| ..+ .+.+.+++ ++.++.-...|-++++-.-.|=--+
T Consensus 173 ~ia~~AGADFVKTSTGf~~---------~gAT~edV~lM~~~v~~~~~~~~~~~~~~~~~~~~~tg~~vgvKAs~GGIrt 243 (297)
T 4eiv_A 173 VAALEGGADFLQTSSGLGA---------THATMFTVHLISIALREYMVRENERIRVEGINREGAAVRCIGIKIEVGDVHM 243 (297)
T ss_dssp HHHHHHTCSEEECCCSSSS---------CCCCHHHHHHHHHHHHHHHCC------------------CCEEEEECTTCCH
T ss_pred HHHHHhCCCEEEcCCCCCC---------CCCCHHHHHHHHHHHHHHhccccccccccccccccccCCceeEEecCCCCCC
Confidence 3356799988654 211 12233333 3333221111333444333232258
Q ss_pred HHHHHHHHHHHhcCCCCCCeeeeeeee
Q 020848 181 EEDRVGLLHTLATLPTHPESVPINALL 207 (320)
Q Consensus 181 ~ed~~~~l~~l~~l~~~~~~v~~~~~~ 207 (320)
.++..++++.++++| .+++.-..|+
T Consensus 244 ~e~A~~~i~~~~elG--~~wl~~~~fR 268 (297)
T 4eiv_A 244 AETADFLMQMIFENG--PRSIVRDKFR 268 (297)
T ss_dssp HHHHHHHHHHHHHHC--GGGCSTTTEE
T ss_pred HHHHHHHHHHHHHhC--ccccCCCceE
Confidence 889999999888887 4555444443
No 293
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=64.62 E-value=56 Score=28.36 Aligned_cols=15 Identities=33% Similarity=0.525 Sum_probs=7.0
Q ss_pred HHHHHhccCeeccCc
Q 020848 122 IELKKAGLTAYNHNL 136 (320)
Q Consensus 122 ~~L~~aGld~v~i~l 136 (320)
++|.++|+.++.++.
T Consensus 244 ~eL~~lGv~~v~~~~ 258 (318)
T 1zlp_A 244 EEFKEMGFHLIAHSL 258 (318)
T ss_dssp HHHHHHTCCEEEECS
T ss_pred HHHHHcCCeEEEEch
Confidence 344444555544443
No 294
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=64.59 E-value=56 Score=27.99 Aligned_cols=105 Identities=12% Similarity=0.131 Sum_probs=63.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc--hhHHHHHHHHHHhhh---cCceEEEeCCCC-CHHH---HHHHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGML-EKHQ---AIELKK 126 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~--~~~~~l~~~i~~~k~---~~~~i~~~~g~l-~~e~---l~~L~~ 126 (320)
++.+.+.+.++.+.+.|+..+++.|.+ ||- +..++-.++++.+.+ -.+++.+..|.. +.+. .+...+
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~GtT----GE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~ 105 (301)
T 1xky_A 30 IDFAKTTKLVNYLIDNGTTAIVVGGTT----GESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATE 105 (301)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTT----TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHh
Confidence 789999999999999999999886532 443 344555555555442 246666666653 3444 444566
Q ss_pred hccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeee
Q 020848 127 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSG 172 (320)
Q Consensus 127 aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~-~Gi~v~~~ 172 (320)
+|+|.+.+..-. |. +.+.+..++-.+.+.+ .++++-+.
T Consensus 106 ~Gadavlv~~P~----y~----~~s~~~l~~~f~~va~a~~lPiilY 144 (301)
T 1xky_A 106 VGVDAVMLVAPY----YN----KPSQEGMYQHFKAIAESTPLPVMLY 144 (301)
T ss_dssp TTCSEEEEECCC----SS----CCCHHHHHHHHHHHHHTCSSCEEEE
T ss_pred cCCCEEEEcCCC----CC----CCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 799988764311 11 1244555666655444 35665433
No 295
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=64.57 E-value=20 Score=32.19 Aligned_cols=41 Identities=12% Similarity=0.050 Sum_probs=28.7
Q ss_pred CHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 151 SYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 151 ~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
.+...++.++.|++.|+.+.++ ..++.-.+...+.++..++
T Consensus 283 Git~~~~i~~~A~~~g~~~~~h----~~es~i~~~a~~hlaaa~~ 323 (401)
T 2hzg_A 283 GLGPAKRVADAAQARGITYVNH----TFTSHLALSASLQPFAGLE 323 (401)
T ss_dssp SHHHHHHHHHHHHHHTCEEEEC----CCSCHHHHHHHHGGGTTCT
T ss_pred CHHHHHHHHHHHHHcCCEEecC----CCCcHHHHHHHHHHHHhCC
Confidence 5777788889999999986555 3466656666666665554
No 296
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=64.57 E-value=51 Score=28.43 Aligned_cols=120 Identities=12% Similarity=0.112 Sum_probs=68.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc--hhHHHHHHHHHHhhh---cCceEEEeCCCC-CHHH---HHHHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGML-EKHQ---AIELKK 126 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~--~~~~~l~~~i~~~k~---~~~~i~~~~g~l-~~e~---l~~L~~ 126 (320)
++.+.+.+.++.+.+.|++.+++.|.+ ||- +..++-.++++...+ -.+++.+..|.. +.+. .+...+
T Consensus 41 iD~~~l~~lv~~li~~Gv~Gl~v~GtT----GE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~ 116 (314)
T 3qze_A 41 LDWDSLAKLVDFHLQEGTNAIVAVGTT----GESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKS 116 (314)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESSGG----GTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHH
Confidence 889999999999999999999885532 332 344555555555442 246666666653 3443 445567
Q ss_pred hccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeeeEEE---EeCCCHHHHHHH
Q 020848 127 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGGII---GLGEAEEDRVGL 187 (320)
Q Consensus 127 aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~-~Gi~v~~~~i~---Glget~ed~~~~ 187 (320)
+|+|.+.+-.-.+ . +.+-+..++-.+.+.+ .++++-+.-+. |..-+.+.+.++
T Consensus 117 ~Gadavlv~~P~y----~----~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 173 (314)
T 3qze_A 117 GGADACLLVTPYY----N----KPTQEGMYQHFRHIAEAVAIPQILYNVPGRTSCDMLPETVERL 173 (314)
T ss_dssp TTCSEEEEECCCS----S----CCCHHHHHHHHHHHHHHSCSCEEEEECHHHHSCCCCHHHHHHH
T ss_pred cCCCEEEEcCCCC----C----CCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHH
Confidence 7999877632111 1 1234455555555443 46665443332 223454444433
No 297
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=64.40 E-value=14 Score=31.92 Aligned_cols=65 Identities=11% Similarity=0.114 Sum_probs=43.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhc--CceEEEeCCCCCHHHHHHHHHhccCeecc
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTLGMLEKHQAIELKKAGLTAYNH 134 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~--~~~i~~~~g~l~~e~l~~L~~aGld~v~i 134 (320)
+++|+.+. .+.|++.|.+... ..+++.++++.++.. ++.+..+.|. +.+.++.+.++|+|.+.+
T Consensus 206 tlee~~~A----~~aGaD~I~ld~~---------~~~~l~~~v~~l~~~~~~~~I~ASGGI-t~~ni~~~~~aGaD~i~v 271 (299)
T 2jbm_A 206 SLQEAVQA----AEAGADLVLLDNF---------KPEELHPTATVLKAQFPSVAVEASGGI-TLDNLPQFCGPHIDVISM 271 (299)
T ss_dssp SHHHHHHH----HHTTCSEEEEESC---------CHHHHHHHHHHHHHHCTTSEEEEESSC-CTTTHHHHCCTTCCEEEC
T ss_pred CHHHHHHH----HHcCCCEEEECCC---------CHHHHHHHHHHhhccCCCeeEEEECCC-CHHHHHHHHHCCCCEEEE
Confidence 45554443 3468877776431 235555555555532 3677778775 999999999999999988
Q ss_pred C
Q 020848 135 N 135 (320)
Q Consensus 135 ~ 135 (320)
+
T Consensus 272 G 272 (299)
T 2jbm_A 272 G 272 (299)
T ss_dssp T
T ss_pred C
Confidence 6
No 298
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=64.37 E-value=23 Score=31.59 Aligned_cols=74 Identities=9% Similarity=-0.008 Sum_probs=36.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHhc-cCeecc
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAG-LTAYNH 134 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~aG-ld~v~i 134 (320)
+.++..+.++.+.+.|+..+.+.++.... ..+.. -.++++.+| ..++++..+.|. +.+.++++.+.| +|.|.+
T Consensus 253 ~~~~~~~la~~le~~Gvd~i~v~~~~~~~-~~~~~---~~~~~~~ik~~~~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~i 327 (377)
T 2r14_A 253 PEAMAFYLAGELDRRGLAYLHFNEPDWIG-GDITY---PEGFREQMRQRFKGGLIYCGNY-DAGRAQARLDDNTADAVAF 327 (377)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCC-------CC---CTTHHHHHHHHCCSEEEEESSC-CHHHHHHHHHTTSCSEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCcccC-CCCcc---hHHHHHHHHHHCCCCEEEECCC-CHHHHHHHHHCCCceEEee
Confidence 45566666666666666666665432110 00000 123344444 235555555444 566666666665 666666
Q ss_pred C
Q 020848 135 N 135 (320)
Q Consensus 135 ~ 135 (320)
+
T Consensus 328 g 328 (377)
T 2r14_A 328 G 328 (377)
T ss_dssp S
T ss_pred c
Confidence 4
No 299
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=64.30 E-value=61 Score=26.84 Aligned_cols=178 Identities=11% Similarity=0.043 Sum_probs=87.9
Q ss_pred HHHHHHHHHHcCCCEEEEecccCCCCCC------chhHHHHHHHHHHhh----hcCceEEEeCCCCCHHHHHHHHHhccC
Q 020848 61 VMQAAQKAKEAGSTRFCMGAAWRDTIGR------KTNFNQILEYVKDIR----DMGMEVCCTLGMLEKHQAIELKKAGLT 130 (320)
Q Consensus 61 i~~~~~~~~~~g~~~i~l~~g~~~~~ge------~~~~~~l~~~i~~~k----~~~~~i~~~~g~l~~e~l~~L~~aGld 130 (320)
+++.++.+.+.|++-|.+= ..... .....++.++++.++ +.+..+.++.. ++.-.++|.|
T Consensus 45 ~~~~~~~al~~Gv~~vqlR----~K~~~~~~~~~~l~~~~~~~~a~~l~~l~~~~~~~liInd~------~~lA~~~gAd 114 (243)
T 3o63_A 45 LAQFAEAALAGGVDIIQLR----DKGSPGELRFGPLQARDELAACEILADAAHRYGALFAVNDR------ADIARAAGAD 114 (243)
T ss_dssp HHHHHHHHHHTTCSEEEEC----CTTCHHHHHHCSCCHHHHHHHHHHHHHHHHHTTCEEEEESC------HHHHHHHTCS
T ss_pred HHHHHHHHHHCCCCEEEEc----cCCCCccccccCCCHHHHHHHHHHHHHHHHhhCCEEEEeCH------HHHHHHhCCC
Confidence 4555566677899888772 22100 012334444444443 45777767632 2335567999
Q ss_pred eeccCcccc-HHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEe-CCCHHHHHHHHHHHhcCCCCCCeeeeeeeee
Q 020848 131 AYNHNLDTS-REFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL-GEAEEDRVGLLHTLATLPTHPESVPINALLA 208 (320)
Q Consensus 131 ~v~i~let~-~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl-get~ed~~~~l~~l~~l~~~~~~v~~~~~~p 208 (320)
.|.++.+.. ... ++.+... +.++|. -.|.+|+... .+.| ++.|.+.++.|
T Consensus 115 GVHLg~~dl~~~~----------------~r~~~~~------~~~iG~S~ht~~Ea~~A----~~~G--aDyI~vgpvf~ 166 (243)
T 3o63_A 115 VLHLGQRDLPVNV----------------ARQILAP------DTLIGRSTHDPDQVAAA----AAGD--ADYFCVGPCWP 166 (243)
T ss_dssp EEEECTTSSCHHH----------------HHHHSCT------TCEEEEEECSHHHHHHH----HHSS--CSEEEECCSSC
T ss_pred EEEecCCcCCHHH----------------HHHhhCC------CCEEEEeCCCHHHHHHH----hhCC--CCEEEEcCccC
Confidence 999876544 211 1121112 234444 3576665443 3466 78888887655
Q ss_pred cCCCCCCCCCCCCHHHHHHHHHHHHHhCC-C-ceeecCCcccccChhHHHHHHHcCCceEeeCCccccCCCCChhHHHHH
Q 020848 209 VKGTPLQDQKPVEIWEMIRMIATARIVMP-K-AMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLM 286 (320)
Q Consensus 209 ~~gt~~~~~~~~~~~e~~~~~a~~R~~~p-~-~~i~~~~g~~~~~~~~~~~~~~~Gan~~~~~~~~~~~~~~~~~~~~~~ 286 (320)
.+..+. .++...+.+.++. ...+ + +.+-+ + ++.++.-...+.+|++.+..+..+... .++.+..+.
T Consensus 167 T~tK~~--~~~~gl~~l~~~~----~~~~~~iPvvAi-G---GI~~~ni~~~~~aGa~gvav~sai~~a--~dp~~a~~~ 234 (243)
T 3o63_A 167 TPTKPG--RAAPGLGLVRVAA----ELGGDDKPWFAI-G---GINAQRLPAVLDAGARRIVVVRAITSA--DDPRAAAEQ 234 (243)
T ss_dssp CCC-------CCCHHHHHHHH----TC---CCCEEEE-S---SCCTTTHHHHHHTTCCCEEESHHHHTC--SSHHHHHHH
T ss_pred CCCCCC--cchhhHHHHHHHH----HhccCCCCEEEe-c---CCCHHHHHHHHHcCCCEEEEeHHHhCC--CCHHHHHHH
Confidence 432222 1234444322221 1111 2 22222 2 223333456778999999887645433 334444444
Q ss_pred HH
Q 020848 287 FK 288 (320)
Q Consensus 287 i~ 288 (320)
++
T Consensus 235 l~ 236 (243)
T 3o63_A 235 LR 236 (243)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 300
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=64.27 E-value=31 Score=31.27 Aligned_cols=106 Identities=16% Similarity=0.239 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCce---EEEeCCCCCHHHHHHHHHhccCee--c
Q 020848 59 DAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGME---VCCTLGMLEKHQAIELKKAGLTAY--N 133 (320)
Q Consensus 59 eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~---i~~~~g~l~~e~l~~L~~aGld~v--~ 133 (320)
+.+.+.++.+++.|. .+.+... ..+ ....++++++++.+.+.|.. +.-|.|..++..+..|.+.=...+ .
T Consensus 151 ~~~~~~v~~ak~~G~-~V~~~~e-da~---r~d~~~~~~v~~~~~~~Ga~~i~l~DTvG~~~P~~v~~lv~~l~~~~~~~ 225 (423)
T 3ivs_A 151 DSATEVINFVKSKGI-EVRFSSE-DSF---RSDLVDLLSLYKAVDKIGVNRVGIADTVGCATPRQVYDLIRTLRGVVSCD 225 (423)
T ss_dssp HHHHHHHHHHHTTTC-EEEEEEE-SGG---GSCHHHHHHHHHHHHHHCCSEEEEEETTSCCCHHHHHHHHHHHHHHCSSE
T ss_pred HHHHHHHHHHHHCCC-EEEEEEc-cCc---CCCHHHHHHHHHHHHHhCCCccccCCccCcCCHHHHHHHHHHHHhhcCCe
Confidence 444445556666776 3444321 111 12446677777777766643 456788888877766654412222 2
Q ss_pred cCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCC
Q 020848 134 HNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGE 179 (320)
Q Consensus 134 i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glge 179 (320)
+++ +...++..-+.+...+.++|...-=..+.|+||
T Consensus 226 i~~----------H~Hnd~GlAvAN~laAv~aGa~~vd~ti~GlGE 261 (423)
T 3ivs_A 226 IEC----------HFHNDTGMAIANAYCALEAGATHIDTSILGIGE 261 (423)
T ss_dssp EEE----------EEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSS
T ss_pred EEE----------EECCCCchHHHHHHHHHHhCCCEEEEecccccC
Confidence 222 223344444566667777888754455677765
No 301
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=64.11 E-value=15 Score=33.32 Aligned_cols=44 Identities=11% Similarity=-0.036 Sum_probs=27.4
Q ss_pred CCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 150 RSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
..+...++....|...|+.+.++... .++.=-+...+.++..++
T Consensus 308 GGit~~~kia~lA~a~gv~v~~h~~~--~~s~Ig~aA~~hlaaa~p 351 (422)
T 3tji_A 308 GGITPALKLAHLCQAFGVRLAWHGPG--DMTPIGVAVNTHLNIHLH 351 (422)
T ss_dssp TSHHHHHHHHHHHHHTTCEECCCCCS--SSCHHHHHHHHHHHHHCT
T ss_pred CCHHHHHHHHHHHHHcCCEEEecCCC--CccHHHHHHHHHHHHhCC
Confidence 35777788888888899887666442 124334455555555553
No 302
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=64.10 E-value=13 Score=33.59 Aligned_cols=99 Identities=8% Similarity=0.045 Sum_probs=50.3
Q ss_pred hHHHHHHHHHHhhhcCceE-EEeCCCCCHHHHHHHHHhccCeeccC-cccc---HHHHhhhCC------------CCCHH
Q 020848 91 NFNQILEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKAGLTAYNHN-LDTS---REFYSKIIT------------TRSYD 153 (320)
Q Consensus 91 ~~~~l~~~i~~~k~~~~~i-~~~~g~l~~e~l~~L~~aGld~v~i~-let~---~~~~~~i~~------------~~~~~ 153 (320)
..++..++++.+.+.++.. .-....-+.+.+++|++. + .+.+. -|+. .+..+.+.. -....
T Consensus 222 ~~~~a~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~-~-~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 299 (410)
T 2qq6_A 222 DIPSSIRFARAMEPFGLLWLEEPTPPENLDALAEVRRS-T-STPICAGENVYTRFDFRELFAKRAVDYVMPDVAKCGGLA 299 (410)
T ss_dssp CHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHTT-C-SSCEEECTTCCSHHHHHHHHHTTCCSEECCBHHHHTHHH
T ss_pred CHHHHHHHHHHHhhcCCCeEECCCChhhHHHHHHHHhh-C-CCCEEeCCCcCCHHHHHHHHHcCCCCEEecCccccCCHH
Confidence 4566777777776666542 211222346667777654 1 22221 1111 122221211 12466
Q ss_pred HHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 154 ERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 154 ~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
..++.++.|++.|+.+.++.+. +.=-+...+.++..++
T Consensus 300 e~~~ia~~A~~~g~~~~~h~~~----s~i~~aa~~hlaaa~~ 337 (410)
T 2qq6_A 300 EAKRIANLAELDYIPFAPHNVS----SPVGTVAAAHVCAAVS 337 (410)
T ss_dssp HHHHHHHHHHTTTCCBCCBCCS----CHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHcCCeEeecCCC----cHHHHHHHHHHHHhCC
Confidence 6778888888888886665441 3333445555555553
No 303
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=64.08 E-value=58 Score=27.80 Aligned_cols=106 Identities=11% Similarity=0.070 Sum_probs=63.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc--hhHHHHHHHHHHhhh---cCceEEEeCCC-CCHHH---HHHHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGM-LEKHQ---AIELKK 126 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~--~~~~~l~~~i~~~k~---~~~~i~~~~g~-l~~e~---l~~L~~ 126 (320)
++.+.+.+.++.+.+.|++.+++.|.+ ||- +..++-.++++...+ -.+++.+..|. -+.+. .+...+
T Consensus 25 iD~~~l~~lv~~li~~Gv~gl~~~Gtt----GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~ 100 (297)
T 3flu_A 25 IHYEQLRDLIDWHIENGTDGIVAVGTT----GESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEK 100 (297)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTT----TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccc----cCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHH
Confidence 789999999999999999999886532 442 344555566655542 24666666665 33433 445567
Q ss_pred hccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeeeE
Q 020848 127 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGG 173 (320)
Q Consensus 127 aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~-~Gi~v~~~~ 173 (320)
+|.|.+.+-.-.+ . +.+-+..++-.+.+.+ .++++-+.-
T Consensus 101 ~Gadavlv~~P~y----~----~~~~~~l~~~f~~va~a~~lPiilYn 140 (297)
T 3flu_A 101 AGADYTLSVVPYY----N----KPSQEGIYQHFKTIAEATSIPMIIYN 140 (297)
T ss_dssp TTCSEEEEECCCS----S----CCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred cCCCEEEECCCCC----C----CCCHHHHHHHHHHHHHhCCCCEEEEE
Confidence 7999887632111 1 1234555555555443 466654433
No 304
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=64.07 E-value=36 Score=30.08 Aligned_cols=70 Identities=13% Similarity=0.115 Sum_probs=45.6
Q ss_pred HHHHHHcCCCEEEEeccc-CC-C------CCCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 65 AQKAKEAGSTRFCMGAAW-RD-T------IGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 65 ~~~~~~~g~~~i~l~~g~-~~-~------~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
++.+.+.|++.|.++.+. .. + .|.| .+..+.++.+..+..++++....|..+.+.+.+...+|.+.|.++
T Consensus 159 A~~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g~p-~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vG 236 (361)
T 3khj_A 159 TKELIENGADGIKVGIGPGSICTTRIVAGVGVP-QITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMIG 236 (361)
T ss_dssp HHHHHHTTCSEEEECSSCCTTCCHHHHTCBCCC-HHHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHHHHcCcCEEEEecCCCcCCCcccccCCCCC-cHHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 344556899888874211 00 0 0112 334444444444456889989999989999999999999998875
No 305
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=63.79 E-value=30 Score=30.59 Aligned_cols=83 Identities=10% Similarity=-0.033 Sum_probs=44.0
Q ss_pred hHHHHHHHHHHhhhc-Cce-EEEeCCCCCHHHHHHHHHhccCe-eccC----ccccHHHHhh----------hCCCCCHH
Q 020848 91 NFNQILEYVKDIRDM-GME-VCCTLGMLEKHQAIELKKAGLTA-YNHN----LDTSREFYSK----------IITTRSYD 153 (320)
Q Consensus 91 ~~~~l~~~i~~~k~~-~~~-i~~~~g~l~~e~l~~L~~aGld~-v~i~----let~~~~~~~----------i~~~~~~~ 153 (320)
..++..++++.+.+. ++. +.-....-+.+.+++|++. +.. +.+. +-+..+..+. +.+-..+.
T Consensus 200 ~~~~a~~~~~~l~~~~~i~~iEqP~~~~d~~~~~~l~~~-~~~~ipIa~dE~~~~~~~~~~~~~a~d~i~ik~~~~GGit 278 (372)
T 3cyj_A 200 TRKQALYWAGAFAREAGISYLEEPVSSEDREGLRLLRDR-GPGGVAIAAGEYEWTLPQLHDLAGCVDILQADVTRCGGIT 278 (372)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEECSSCTTCHHHHHHHHHH-SCTTCEEEECTTCCSHHHHHHHHTTCSEEEECTTTTTHHH
T ss_pred CHHHHHHHHHHHHhhcCCcEEECCCCcccHHHHHHHHHh-CCCCCCEECCCCccCHHHHHHHhCCCCEEecCchhhCCHH
Confidence 346666666666666 654 2222222356666667654 221 3332 1121121111 11123577
Q ss_pred HHHHHHHHHHHcCCeeeeeEE
Q 020848 154 ERLETLKHVREAGINVCSGGI 174 (320)
Q Consensus 154 ~~l~~i~~a~~~Gi~v~~~~i 174 (320)
..++.++.|++.|+.+.++.+
T Consensus 279 ~~~~i~~~A~~~gi~~~~~~~ 299 (372)
T 3cyj_A 279 GLLRVDGICRGHQIPFSAHCA 299 (372)
T ss_dssp HHTTHHHHHHHHTCCEEECSC
T ss_pred HHHHHHHHHHHcCCeecccch
Confidence 888899999999998766654
No 306
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=63.75 E-value=59 Score=26.50 Aligned_cols=177 Identities=15% Similarity=0.129 Sum_probs=104.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeCCC----CC-H---HHHHHHHHh
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGM----LE-K---HQAIELKKA 127 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~----l~-~---e~l~~L~~a 127 (320)
.+.+++.+.++.+.+.|+..+++. |.+.+...+ .++..++.+++..|. .+ + ...++-.+.
T Consensus 16 ~t~~~i~~l~~~a~~~~~~aVcv~---------p~~v~~~~~---~l~~~~v~v~~vigFP~G~~~~~~k~~e~~~Ai~~ 83 (220)
T 1ub3_A 16 ATLEEVAKAAEEALEYGFYGLCIP---------PSYVAWVRA---RYPHAPFRLVTVVGFPLGYQEKEVKALEAALACAR 83 (220)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECC---------GGGHHHHHH---HCTTCSSEEEEEESTTTCCSCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEC---------HHHHHHHHH---HhCCCCceEEEEecCCCCCCchHHHHHHHHHHHHc
Confidence 689999999999999999999874 334444333 334445665443332 22 2 345555667
Q ss_pred ccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEe-CCCHHHHHHHHHHHhcCCCCCCeeeeee-
Q 020848 128 GLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL-GEAEEDRVGLLHTLATLPTHPESVPINA- 205 (320)
Q Consensus 128 Gld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl-get~ed~~~~l~~l~~l~~~~~~v~~~~- 205 (320)
|.|.|.+-+.-. .+ ...+++.+++-|...++.--...+-+|+-. --+++++....+...+.| .+.|.-..
T Consensus 84 GAdevd~vinig-----~~-~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l~~e~i~~a~~ia~eaG--ADfVKTsTG 155 (220)
T 1ub3_A 84 GADEVDMVLHLG-----RA-KAGDLDYLEAEVRAVREAVPQAVLKVILETGYFSPEEIARLAEAAIRGG--ADFLKTSTG 155 (220)
T ss_dssp TCSEEEEECCHH-----HH-HTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGSCHHHHHHHHHHHHHHT--CSEEECCCS
T ss_pred CCCEEEecccch-----hh-hCCCHHHHHHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC--CCEEEeCCC
Confidence 999887755332 11 135778888888877764212233334433 236888999999999998 67766543
Q ss_pred eeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccChhHHHHHHHcCCceE
Q 020848 206 LLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSI 266 (320)
Q Consensus 206 ~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~~~~~~~~~~Gan~~ 266 (320)
|.| ...+.++...+... .-+...+.+++|--. .......+.+||+++
T Consensus 156 f~~---------~gat~~dv~~m~~~---vg~~v~VkaaGGirt--~~~al~~i~aGa~Ri 202 (220)
T 1ub3_A 156 FGP---------RGASLEDVALLVRV---AQGRAQVKAAGGIRD--RETALRMLKAGASRL 202 (220)
T ss_dssp SSS---------CCCCHHHHHHHHHH---HTTSSEEEEESSCCS--HHHHHHHHHTTCSEE
T ss_pred CCC---------CCCCHHHHHHHHHh---hCCCCeEEEECCCCC--HHHHHHHHHCCCccc
Confidence 332 22345543333322 334455566654322 222344567899866
No 307
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=63.72 E-value=51 Score=28.31 Aligned_cols=76 Identities=13% Similarity=0.097 Sum_probs=51.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc--hhHHHHHHHHHHhhhc---CceEEEeCCC-CCHHH---HHHHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRDM---GMEVCCTLGM-LEKHQ---AIELKK 126 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~--~~~~~l~~~i~~~k~~---~~~i~~~~g~-l~~e~---l~~L~~ 126 (320)
++.+.+.+.++.+.+.|++.+++.|.+ ||- +..++-.++++.+.+. .+++.+..|. -+.+. .+...+
T Consensus 32 iD~~~l~~lv~~li~~Gv~Gl~v~GtT----GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~ 107 (307)
T 3s5o_A 32 VDYGKLEENLHKLGTFPFRGFVVQGSN----GEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQ 107 (307)
T ss_dssp BCHHHHHHHHHHHTTSCCSEEEESSGG----GTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----cchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHH
Confidence 789999999999999999999886532 442 3456666666665532 4666666664 34443 445567
Q ss_pred hccCeeccC
Q 020848 127 AGLTAYNHN 135 (320)
Q Consensus 127 aGld~v~i~ 135 (320)
+|.|.+.+-
T Consensus 108 ~Gadavlv~ 116 (307)
T 3s5o_A 108 VGADAAMVV 116 (307)
T ss_dssp TTCSEEEEE
T ss_pred cCCCEEEEc
Confidence 799988763
No 308
>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi}
Probab=63.66 E-value=63 Score=26.83 Aligned_cols=126 Identities=17% Similarity=0.116 Sum_probs=74.1
Q ss_pred HHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEE
Q 020848 95 ILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGI 174 (320)
Q Consensus 95 l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i 174 (320)
|....+.++..++.+..-|- -..+....|+++|++++-++- .-++.+. +.+-+.+-+.++.+.+.|+.+ |
T Consensus 49 L~~v~~~~~~~~i~vgAQn~-~~~~~~~mL~d~G~~~ViiGH----SERR~~f-~Etd~~v~~Kv~~Al~~GL~p----I 118 (244)
T 2v5b_A 49 IPMTKARLTNPKFQIAAQNA-GNADALASLKDYGISWVVLGH----SERRLYY-GETNEIVAEKVAQACAAGFHV----I 118 (244)
T ss_dssp HHHHHHHCCCTTEEEEESCC-CCHHHHHHHHHTTCCEEEECC----HHHHHHS-CCCHHHHHHHHHHHHHTTCEE----E
T ss_pred HHHHHHHhcCCCceEEeccC-CCCCCHHHHHHcCCCEEEeCc----hhhhhcc-CCCHHHHHHHHHHHHHCCCeE----E
Confidence 43434444433455544332 233449999999999998875 1122222 456777788889999999865 5
Q ss_pred EEeCCCHHHHHH----------HHHHHhcCCCCCCe--eeeeeeeecC--CCCCCCCCCCCHHHHHHHHHHHHHhC
Q 020848 175 IGLGEAEEDRVG----------LLHTLATLPTHPES--VPINALLAVK--GTPLQDQKPVEIWEMIRMIATARIVM 236 (320)
Q Consensus 175 ~Glget~ed~~~----------~l~~l~~l~~~~~~--v~~~~~~p~~--gt~~~~~~~~~~~e~~~~~a~~R~~~ 236 (320)
+-.||+.++... +-..+..+. ++. -.+..|-|+= ||. ...++++...+.+..|..+
T Consensus 119 ~CvGEtleereag~t~~vv~~Ql~~~l~~~~--~~~~~~~vIAYEPvWAIGTG----~~Atpe~aqevh~~IR~~l 188 (244)
T 2v5b_A 119 VCVGETNEEREAGRTAAVVLTQLAAVAQKLS--KEAWSRVVIAYEPVWAIGTG----KVATPQQAQEVHELLRRWV 188 (244)
T ss_dssp EEECCCHHHHHTTCHHHHHHHHHHHHHTTCC--TGGGGGEEEEECCHHHHSSS----CCCCHHHHHHHHHHHHHHH
T ss_pred EEcCCcHHHHhcCCHHHHHHHHHHHHHhcCC--HHHcCCEEEEECCHHHhCCC----CCCCHHHHHHHHHHHHHHH
Confidence 556888877321 112233343 211 1234666642 665 3477888888877777654
No 309
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=63.62 E-value=17 Score=32.98 Aligned_cols=75 Identities=11% Similarity=0.047 Sum_probs=49.5
Q ss_pred CCHHHHHHHHHHHHH-cCCCEEEEecccC-------CCCCCchhHHHHHHHHHHhhh-c--CceEEEeCCCCCHHHHHHH
Q 020848 56 MTKDAVMQAAQKAKE-AGSTRFCMGAAWR-------DTIGRKTNFNQILEYVKDIRD-M--GMEVCCTLGMLEKHQAIEL 124 (320)
Q Consensus 56 ~s~eei~~~~~~~~~-~g~~~i~l~~g~~-------~~~ge~~~~~~l~~~i~~~k~-~--~~~i~~~~g~l~~e~l~~L 124 (320)
++.++..+.++.+.+ .|++.+.+.+++. ...+. .... ++++.+|+ . .+++..+.|..+.+.++++
T Consensus 261 ~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~-~~~~---~~a~~Ik~~v~~~iPVI~~GgI~t~e~Ae~~ 336 (419)
T 3l5a_A 261 YTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGD-HFGR---PVNQIVYEHLAGRIPLIASGGINSPESALDA 336 (419)
T ss_dssp ECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSST-TTTS---BHHHHHHHHHTTSSCEEECSSCCSHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCc-cccH---HHHHHHHHHcCCCCeEEEECCCCCHHHHHHH
Confidence 467888888888888 8999888876532 00111 1111 23344442 2 4777777777888888888
Q ss_pred HHhccCeeccC
Q 020848 125 KKAGLTAYNHN 135 (320)
Q Consensus 125 ~~aGld~v~i~ 135 (320)
.+. +|.|.++
T Consensus 337 L~~-aDlVaiG 346 (419)
T 3l5a_A 337 LQH-ADMVGMS 346 (419)
T ss_dssp GGG-CSEEEES
T ss_pred HHh-CCcHHHH
Confidence 777 8888876
No 310
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=63.54 E-value=69 Score=27.23 Aligned_cols=120 Identities=13% Similarity=0.086 Sum_probs=68.4
Q ss_pred CCHHHHHHHHHHHHH-cCCCEEEEecccCCCCCCc--hhHHHHHHHHHHhhh---cCceEEEeCCCC-CHHH---HHHHH
Q 020848 56 MTKDAVMQAAQKAKE-AGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGML-EKHQ---AIELK 125 (320)
Q Consensus 56 ~s~eei~~~~~~~~~-~g~~~i~l~~g~~~~~ge~--~~~~~l~~~i~~~k~---~~~~i~~~~g~l-~~e~---l~~L~ 125 (320)
++.+.+.+.++.+.+ .|+..+++.|.+ ||- +..++-.++++.+.+ -.+++.+..|.. +.+. .+...
T Consensus 21 iD~~~l~~lv~~li~~~Gv~gl~~~Gtt----GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~ 96 (293)
T 1f6k_A 21 INEKGLRQIIRHNIDKMKVDGLYVGGST----GENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYAT 96 (293)
T ss_dssp BCHHHHHHHHHHHHHTSCCSEEEESSGG----GTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhhCCCcEEEeCccc----cchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHH
Confidence 789999999999999 999999885532 342 344555555555542 246776666653 3444 44456
Q ss_pred HhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeeeEEEEe---CCCHHHHHHH
Q 020848 126 KAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGGIIGL---GEAEEDRVGL 187 (320)
Q Consensus 126 ~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~-~Gi~v~~~~i~Gl---get~ed~~~~ 187 (320)
++|.|.+.+..-.+ . +.+.+...+-.+.+.+ .++++-+.-+.+. .-+.+.+.++
T Consensus 97 ~~Gadavlv~~P~y----~----~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 154 (293)
T 1f6k_A 97 ELGYDCLSAVTPFY----Y----KFSFPEIKHYYDTIIAETGSNMIVYSIPFLTGVNMGIEQFGEL 154 (293)
T ss_dssp HHTCSEEEEECCCS----S----CCCHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCHHHHHHH
T ss_pred hcCCCEEEECCCCC----C----CCCHHHHHHHHHHHHHhCCCCEEEEECccccCcCCCHHHHHHH
Confidence 67999887643111 1 1234445555554333 4666543333222 2354444444
No 311
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=63.52 E-value=19 Score=32.43 Aligned_cols=99 Identities=8% Similarity=-0.076 Sum_probs=48.7
Q ss_pred hhHHHHHHHHHHhhhcCce-EEEeCCCCCHHHHHHHHHhccCeeccCc-ccc--H-HHHhhh------------CCCCCH
Q 020848 90 TNFNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKAGLTAYNHNL-DTS--R-EFYSKI------------ITTRSY 152 (320)
Q Consensus 90 ~~~~~l~~~i~~~k~~~~~-i~~~~g~l~~e~l~~L~~aGld~v~i~l-et~--~-~~~~~i------------~~~~~~ 152 (320)
...++..++++.+.+.++. +.-....-+.+.+++|++. . .+.+.. |+. . +..+.+ .+-...
T Consensus 221 ~~~~~A~~~~~~L~~~~i~~iEeP~~~~~~~~~~~l~~~-~-~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~d~~~~GGi 298 (400)
T 4dxk_A 221 WQLLPAMQIAKALTPYQTFWHEDPIKMDSLSSLTRYAAV-S-PAPISASETLGSRWAFRDLLETGAAGVVMLDISWCGGL 298 (400)
T ss_dssp BCHHHHHHHHHHTGGGCCSEEECCBCTTSGGGHHHHHHH-C-SSCEEECTTCCHHHHHHHHHHTTCCCEEEECTTTTTHH
T ss_pred CCHHHHHHHHHHHhhcCCCEEEcCCCcccHHHHHHHHHh-C-CCCEEecCCcCCHHHHHHHHHcCCCCEEEeCccccCCH
Confidence 3456677777777766654 2222222344556666654 1 122221 121 1 111111 112246
Q ss_pred HHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcC
Q 020848 153 DERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 194 (320)
Q Consensus 153 ~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 194 (320)
...++....+...|+.+.++... +.=-+...+.+...+
T Consensus 299 t~~~kia~~A~~~gi~~~~h~~~----s~i~~aa~~hlaaa~ 336 (400)
T 4dxk_A 299 SEARKIASMAEAWHLPVAPHXCT----GPVVLCASTHLSLNA 336 (400)
T ss_dssp HHHHHHHHHHHHTTCCEEEC-CC----CHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCEEEecCCC----ChHHHHHHHHHHHhC
Confidence 77788888888888887665432 322344445555444
No 312
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=63.50 E-value=44 Score=28.35 Aligned_cols=88 Identities=13% Similarity=0.090 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeeccCcc
Q 020848 58 KDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLD 137 (320)
Q Consensus 58 ~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~le 137 (320)
.+++++.++.+.+.|...+++-+ ....+.+.++.+.++ ..+-+...++.++. ++|.++|+.++.++..
T Consensus 167 ~~~ai~Ra~ay~eAGAd~i~~e~--------~~~~~~~~~i~~~~~-~P~n~~~~~~~~~~---~eL~~lGv~~v~~~~~ 234 (275)
T 2ze3_A 167 LAETVRRGQAYADAGADGIFVPL--------ALQSQDIRALADALR-VPLNVMAFPGSPVP---RALLDAGAARVSFGQS 234 (275)
T ss_dssp HHHHHHHHHHHHHTTCSEEECTT--------CCCHHHHHHHHHHCS-SCEEEECCTTSCCH---HHHHHTTCSEEECTTH
T ss_pred HHHHHHHHHHHHHCCCCEEEECC--------CCCHHHHHHHHHhcC-CCEEEecCCCCCCH---HHHHHcCCcEEEEChH
Q ss_pred ccHHHHhhhCCCCCHHHHHHHHHHHHHcC
Q 020848 138 TSREFYSKIITTRSYDERLETLKHVREAG 166 (320)
Q Consensus 138 t~~~~~~~i~~~~~~~~~l~~i~~a~~~G 166 (320)
.+...+..+ .+..+.+++.|
T Consensus 235 ~~raa~~a~---------~~~~~~i~~~g 254 (275)
T 2ze3_A 235 LMLATLGLV---------QRMAAELHAAE 254 (275)
T ss_dssp HHHHHHHHH---------HHHHHHHHHHS
T ss_pred HHHHHHHHH---------HHHHHHHHHhC
No 313
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=63.42 E-value=41 Score=25.82 Aligned_cols=68 Identities=15% Similarity=0.210 Sum_probs=45.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcC---ceEEEeCCCCCHHHHHHHHHhccCee
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMG---MEVCCTLGMLEKHQAIELKKAGLTAY 132 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~---~~i~~~~g~l~~e~l~~L~~aGld~v 132 (320)
.++|++.+.++ +.+.+-|.+++.. ....+.+.++++.+++.+ +.+.+- |....+....|++.|+|.+
T Consensus 56 ~p~e~lv~aa~---~~~~diV~lS~~~------~~~~~~~~~~i~~L~~~g~~~i~v~vG-G~~~~~~~~~l~~~G~d~v 125 (161)
T 2yxb_A 56 QTPEQVAMAAV---QEDVDVIGVSILN------GAHLHLMKRLMAKLRELGADDIPVVLG-GTIPIPDLEPLRSLGIREI 125 (161)
T ss_dssp CCHHHHHHHHH---HTTCSEEEEEESS------SCHHHHHHHHHHHHHHTTCTTSCEEEE-ECCCHHHHHHHHHTTCCEE
T ss_pred CCHHHHHHHHH---hcCCCEEEEEeec------hhhHHHHHHHHHHHHhcCCCCCEEEEe-CCCchhcHHHHHHCCCcEE
Confidence 68888877654 4677777776421 124566777777777543 444443 5666777788999999975
Q ss_pred c
Q 020848 133 N 133 (320)
Q Consensus 133 ~ 133 (320)
.
T Consensus 126 ~ 126 (161)
T 2yxb_A 126 F 126 (161)
T ss_dssp E
T ss_pred E
Confidence 4
No 314
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=63.39 E-value=16 Score=33.07 Aligned_cols=26 Identities=8% Similarity=0.043 Sum_probs=19.3
Q ss_pred CCHHHHHHHHHHHHHcCCeeeeeEEE
Q 020848 150 RSYDERLETLKHVREAGINVCSGGII 175 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~v~~~~i~ 175 (320)
......++....|...|+.+..+...
T Consensus 307 GGite~~~ia~~A~~~gi~v~~h~~~ 332 (421)
T 4hnl_A 307 GGITPALKLAHFCDAMGVRIAWHTPS 332 (421)
T ss_dssp TSHHHHHHHHHHHHHTTCEECCCCCS
T ss_pred CCHHHHHHHHHHHHHCCCeEEEeCCc
Confidence 35777788888888888887666543
No 315
>2dsk_A Chitinase; catalytic domain, active domain, crystalline CHIT barrel, hydrolase; 1.50A {Pyrococcus furiosus} PDB: 3a4w_A* 3a4x_A* 3afb_A
Probab=63.23 E-value=27 Score=30.25 Aligned_cols=74 Identities=11% Similarity=0.047 Sum_probs=44.5
Q ss_pred HHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHc--CCeeeeeEEEEe-CCCHHHHHHHHHHHhcCCCCC
Q 020848 122 IELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREA--GINVCSGGIIGL-GEAEEDRVGLLHTLATLPTHP 198 (320)
Q Consensus 122 ~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~--Gi~v~~~~i~Gl-get~ed~~~~l~~l~~l~~~~ 198 (320)
..+.++|+|.|-+.+|.. ...+++.++++.+++. ++++.+++-... +-+. +=.+.+..++..+..+
T Consensus 105 ~~i~~ygldGIDfDiE~~----------~~~d~~~~aL~~l~~~~p~~~vs~TL~~~p~gl~~-~g~~~l~~a~~~g~~l 173 (311)
T 2dsk_A 105 KVIDTYNATYLDFDIEAG----------IDADKLADALLIVQRERPWVKFSFTLPSDPGIGLA-GGYGIIETMAKKGVRV 173 (311)
T ss_dssp HHHHHHTCSEEEEEECSC----------CCHHHHHHHHHHHHHHSTTCEEEEEEEEETTTEES-THHHHHHHHHHHTCCC
T ss_pred HHHHHhCCCcEEEeccCC----------ccHHHHHHHHHHHHhhCCCcEEEEEeccCCCCCCc-chHHHHHHHHHcCccc
Confidence 455678999999999885 1124566777777664 566777665543 2221 1123455556555335
Q ss_pred Ceeeeeee
Q 020848 199 ESVPINAL 206 (320)
Q Consensus 199 ~~v~~~~~ 206 (320)
+.|.++.+
T Consensus 174 d~VniM~~ 181 (311)
T 2dsk_A 174 DRVNPMTM 181 (311)
T ss_dssp CEEEEECC
T ss_pred cEEEEEee
Confidence 67777654
No 316
>3s6d_A Putative triosephosphate isomerase; seattle structural genomics center for infectious disease, S pathogenic fungus, eukaryote; 2.20A {Coccidioides immitis RS}
Probab=63.19 E-value=36 Score=29.42 Aligned_cols=148 Identities=15% Similarity=0.177 Sum_probs=74.8
Q ss_pred HHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHH---------------
Q 020848 121 AIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRV--------------- 185 (320)
Q Consensus 121 l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~--------------- 185 (320)
...|+++|++++-++-- |.+... +.+-+.+-+.++.+.+.|+.+ |+-.||+.++..
T Consensus 133 a~mLkd~G~~~ViiGHS---ERR~~f--~Etde~V~~Kv~aAl~~GL~p----IvCVGEtleere~~~~~~g~t~~vv~~ 203 (310)
T 3s6d_A 133 PVCLRDMNVSIVELGHA---ERRAIF--GETDQQVARKAAAAADQGLIP----LVCIGEVSTLGPIVSEAIGRAVGECEA 203 (310)
T ss_dssp HHHHHHTTCCEEEESCH---HHHHHH--CCCHHHHHHHHHHHHHTTCEE----EEEECCCSCCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEeccc---cccccc--CCCHHHHHHHHHHHHHCCCEE----EEEeCCcHHHhhhhccccccHHHHHHH
Confidence 56678899999988752 222222 456777788889999999863 333344432111
Q ss_pred HHHHHHhcCCCCCCeeeeeeeeecC--CCCCCCCCCCCHHHHHHHHHHHHHhCC----C--ceeecC-CcccccChhHHH
Q 020848 186 GLLHTLATLPTHPESVPINALLAVK--GTPLQDQKPVEIWEMIRMIATARIVMP----K--AMVRLS-AGRVRFSMPEQA 256 (320)
Q Consensus 186 ~~l~~l~~l~~~~~~v~~~~~~p~~--gt~~~~~~~~~~~e~~~~~a~~R~~~p----~--~~i~~~-~g~~~~~~~~~~ 256 (320)
++-..+..+.. ... .+..|-|+= ||. ...++++...+.+..|..+. . ..+++- +|-++-. +...
T Consensus 204 Ql~~~l~~l~~-~~~-vVIAYEPVWAIGTG----k~Atpe~aqevh~~IR~~l~~~~~~~a~~vrILYGGSV~~~-n~~~ 276 (310)
T 3s6d_A 204 QIRPVLEALPR-DAP-VIFAYEPVWAIGKP----QPARVDHVGAVVSGIRSVIERIDRHRKGEVRILYGGSAGPG-LWGP 276 (310)
T ss_dssp HHHHHHHHSCT-TSC-EEEEECCGGGC---------CCHHHHHHHHHHHHHHHHHHHTTCSSCEEEEEEEEECTT-TTTT
T ss_pred HHHHHHhcCCc-ccc-eEEEECChhhccCC----CCCCHHHHHHHHHHHHHHHHHhhhcccCceeEEEcCccCHH-HHhh
Confidence 11112233431 112 345666643 654 24678888888777776542 1 123321 2222111 1112
Q ss_pred HHHHcCCceEeeCCccccCCCCChhHHHHHHHH
Q 020848 257 LCFLAGANSIFTGEKLLTTPNNDFDADQLMFKV 289 (320)
Q Consensus 257 ~~~~~Gan~~~~~~~~~~~~~~~~~~~~~~i~~ 289 (320)
.++..+++.++.|.. ....++-.+++++
T Consensus 277 ~~l~~dVDG~LVGgA-----SL~a~~F~~Ii~e 304 (310)
T 3s6d_A 277 GGLGKEVDGMFLGRF-----AHDIEGVRKVVRE 304 (310)
T ss_dssp TSGGGTCSEEEECGG-----GGSHHHHHHHHHH
T ss_pred hcccCCCCEEEeehe-----eecHHHHHHHHHH
Confidence 234577888877752 1234455555544
No 317
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=63.00 E-value=66 Score=28.44 Aligned_cols=75 Identities=12% Similarity=0.145 Sum_probs=46.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc--hhHHHHHHHHHHhhh---cCceEEEeCCC-CCHHHH---HHHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGM-LEKHQA---IELKK 126 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~--~~~~~l~~~i~~~k~---~~~~i~~~~g~-l~~e~l---~~L~~ 126 (320)
++.+.+.+.++.+.+.|+..+++.|.+ ||. +..++-.++++.+.+ -.+++.+..|. -+.+.+ +...+
T Consensus 77 ID~~al~~lv~~li~~Gv~Gl~v~GTT----GE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~ 152 (360)
T 4dpp_A 77 FDLEAYDDLVNIQIQNGAEGVIVGGTT----GEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFA 152 (360)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTT----TTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEecccc----cChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHH
Confidence 788888888888888999888885432 442 334555555554442 24666666564 334443 34455
Q ss_pred hccCeecc
Q 020848 127 AGLTAYNH 134 (320)
Q Consensus 127 aGld~v~i 134 (320)
+|+|.+.+
T Consensus 153 ~Gadavlv 160 (360)
T 4dpp_A 153 VGMHAALH 160 (360)
T ss_dssp TTCSEEEE
T ss_pred cCCCEEEE
Confidence 68887765
No 318
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=62.98 E-value=12 Score=33.34 Aligned_cols=24 Identities=8% Similarity=0.221 Sum_probs=16.0
Q ss_pred CHHHHHHHHHHHHHcCCeeeeeEE
Q 020848 151 SYDERLETLKHVREAGINVCSGGI 174 (320)
Q Consensus 151 ~~~~~l~~i~~a~~~Gi~v~~~~i 174 (320)
.....++....+.+.|+.+.++.+
T Consensus 271 Git~~~~ia~~A~~~gi~~~~~~~ 294 (367)
T 3dg3_A 271 GFTGSTRVHHLAEGLGLDMVMGNQ 294 (367)
T ss_dssp TTHHHHHHHHHHHHHTCEEEECCS
T ss_pred hHHHHHHHHHHHHHcCCeEEECCc
Confidence 345566777778888888655443
No 319
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=62.84 E-value=43 Score=31.16 Aligned_cols=71 Identities=14% Similarity=0.096 Sum_probs=47.3
Q ss_pred HHHHHHcCCCEEEEecc-cCCCCCCchhHHHHHHHHHHhhh----cCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 65 AQKAKEAGSTRFCMGAA-WRDTIGRKTNFNQILEYVKDIRD----MGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 65 ~~~~~~~g~~~i~l~~g-~~~~~ge~~~~~~l~~~i~~~k~----~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
++.+.+.|++.|.+++. ++...+.+..++.+.++.+.+++ ..+++..+.|..+.+.+.+...+|.|.|.++
T Consensus 357 A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iG 432 (511)
T 1kbi_A 357 VIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLG 432 (511)
T ss_dssp HHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 44556789999988542 22212223345555555555542 2578889999988888777777999999886
No 320
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=62.77 E-value=24 Score=31.21 Aligned_cols=81 Identities=14% Similarity=0.312 Sum_probs=54.1
Q ss_pred CCHHHHHHHHHHH-----HHcCCCEEEEecccCC----CCCC----chhHHH-HHHHHHHhhhcCce--EEEeCCC----
Q 020848 56 MTKDAVMQAAQKA-----KEAGSTRFCMGAAWRD----TIGR----KTNFNQ-ILEYVKDIRDMGME--VCCTLGM---- 115 (320)
Q Consensus 56 ~s~eei~~~~~~~-----~~~g~~~i~l~~g~~~----~~ge----~~~~~~-l~~~i~~~k~~~~~--i~~~~g~---- 115 (320)
.+.+.+++.++.+ .+.|++.|.|=.|+.. ..|. |..++. +-.+++.+++.|++ +...++.
T Consensus 23 ~~e~~i~~~ad~~~~~gl~~~G~~~v~iDdgW~~~~rd~~G~~~~~~~~FP~Gl~~l~~~ih~~Glk~Giw~~~~~~~~~ 102 (362)
T 1uas_A 23 INEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRDSQGNFVPNRQTFPSGIKALADYVHAKGLKLGIYSDAGSQTCS 102 (362)
T ss_dssp CCHHHHHHHHHHHHHTSHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTTCHHHHHHHHHHTTCEEEEEEESSSBCTT
T ss_pred CCHHHHHHHHHHHHHcCchhcCCcEEEECCCcCCCCCCCCCCeeEChhccCccHHHHHHHHHHCCCEeEEEeeCCCcccc
Confidence 6789999999988 7788988888555432 1121 122333 77777788877766 3334332
Q ss_pred ------C--CHHHHHHHHHhccCeeccCc
Q 020848 116 ------L--EKHQAIELKKAGLTAYNHNL 136 (320)
Q Consensus 116 ------l--~~e~l~~L~~aGld~v~i~l 136 (320)
. .+..++.+++.|+|.|-++.
T Consensus 103 ~~~pg~~~~~~~~~~~~~~wGvdyvK~D~ 131 (362)
T 1uas_A 103 NKMPGSLDHEEQDVKTFASWGVDYLKYDN 131 (362)
T ss_dssp SSSBCCTTCHHHHHHHHHHHTCCEEEEEC
T ss_pred CCCCCchhHHHHHHHHHHHcCCCEEEECc
Confidence 1 25678889999999988764
No 321
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=62.76 E-value=7.6 Score=34.06 Aligned_cols=66 Identities=15% Similarity=0.096 Sum_probs=45.0
Q ss_pred hcCceEEEeCCCCCHHHHHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEE
Q 020848 104 DMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGII 175 (320)
Q Consensus 104 ~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~ 175 (320)
+.|......+|. ..+.++.|+++|++.|.+.+-.-|. ....+++.+++.++.|+++|+++-+++-+
T Consensus 17 ~~g~~~~~~~G~-~~d~~~ilk~~G~N~VRi~~w~~P~-----~g~~~~~~~~~~~~~A~~~GlkV~ld~Hy 82 (332)
T 1hjs_A 17 RAGVSYKNTNGN-AQPLENILAANGVNTVRQRVWVNPA-----DGNYNLDYNIAIAKRAKAAGLGVYIDFHY 82 (332)
T ss_dssp HTTCCCBCTTSC-BCCHHHHHHHTTCCEEEEEECSSCT-----TCTTSHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HcCCEEECCCCC-cccHHHHHHHCCCCEEEEeeeeCCC-----CCcCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 344443233343 2467888999999999886521122 12347899999999999999998777643
No 322
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=62.63 E-value=54 Score=28.18 Aligned_cols=106 Identities=12% Similarity=0.113 Sum_probs=62.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc--hhHHHHHHHHHHhhh---cCceEEEeCCC-CCHHH---HHHHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGM-LEKHQ---AIELKK 126 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~--~~~~~l~~~i~~~k~---~~~~i~~~~g~-l~~e~---l~~L~~ 126 (320)
++.+.+.+.++.+.+.|++.+++.|.+ ||. +..++-.++++.+.+ -.+++.+..|. -+.+. .+...+
T Consensus 26 iD~~~l~~lv~~li~~Gv~gl~v~GtT----GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~ 101 (309)
T 3fkr_A 26 LDLASQKRAVDFMIDAGSDGLCILANF----SEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQ 101 (309)
T ss_dssp BCHHHHHHHHHHHHHTTCSCEEESSGG----GTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----cCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHH
Confidence 789999999999999999999886532 442 344555555555442 24667666664 33443 445566
Q ss_pred hccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeee
Q 020848 127 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVC 170 (320)
Q Consensus 127 aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~-~Gi~v~ 170 (320)
+|.|.+.+-.- .|.... +.+-+..++-.+...+ .++++-
T Consensus 102 ~Gadavlv~~P----yy~~~~-~~s~~~l~~~f~~va~a~~lPii 141 (309)
T 3fkr_A 102 LGAAMVMAMPP----YHGATF-RVPEAQIFEFYARVSDAIAIPIM 141 (309)
T ss_dssp TTCSEEEECCS----CBTTTB-CCCHHHHHHHHHHHHHHCSSCEE
T ss_pred cCCCEEEEcCC----CCccCC-CCCHHHHHHHHHHHHHhcCCCEE
Confidence 79998776421 121100 1244555555555443 466643
No 323
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=62.63 E-value=38 Score=30.47 Aligned_cols=69 Identities=13% Similarity=0.118 Sum_probs=45.7
Q ss_pred HHHHHcCCCEEEEecc-cCC--C-----CCCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 66 QKAKEAGSTRFCMGAA-WRD--T-----IGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 66 ~~~~~~g~~~i~l~~g-~~~--~-----~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
+.+.+.|++.|.++.+ +.. + .+.| .+..+.++.+.+++.++++....|..+.+.+..+..+|.+.|.++
T Consensus 199 ~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~g~p-~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalalGAd~V~vG 275 (400)
T 3ffs_A 199 KELIENGADGIKVGIGPGSICTTRIVAGVGVP-QITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMIG 275 (400)
T ss_dssp HHHHHTTCSEEEECC---------CCSCBCCC-HHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTTTCSEEEEC
T ss_pred HHHHHcCCCEEEEeCCCCcCcccccccccchh-HHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCCCEEEEC
Confidence 4455679988887311 110 0 0112 344455555555556889989999999999999999999999875
No 324
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=62.59 E-value=63 Score=26.43 Aligned_cols=170 Identities=13% Similarity=0.125 Sum_probs=90.8
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh-hcCceEE-Ee--C--C---C--CCHHHHH
Q 020848 54 KLMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEVC-CT--L--G---M--LEKHQAI 122 (320)
Q Consensus 54 ~~~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k-~~~~~i~-~~--~--g---~--l~~e~l~ 122 (320)
+..+++.+.+.++.+.+.|...+-.++ .+.++++| ..++++. .. . + . -+.++++
T Consensus 31 pl~~~~~~~~~A~a~~~~Ga~~i~~~~---------------~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~~~~~i~ 95 (229)
T 3q58_A 31 PMDKPEIVAAMAQAAASAGAVAVRIEG---------------IENLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVD 95 (229)
T ss_dssp TTCSHHHHHHHHHHHHHTTCSEEEEES---------------HHHHHHHGGGCCSCEEEECBCCCSSCCCCBSCSHHHHH
T ss_pred CCCCcchHHHHHHHHHHCCCcEEEECC---------------HHHHHHHHHhcCCCEEEEEeecCCCCceEeCccHHHHH
Confidence 336788999999999999998875421 23356666 3466643 11 1 1 2 2457899
Q ss_pred HHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeee
Q 020848 123 ELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVP 202 (320)
Q Consensus 123 ~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~ 202 (320)
+++++|+|.|.+..-.. .++... .+.++.+++.|+.+..+ . .+.++. +.+.+.| ++.+.
T Consensus 96 ~~~~aGad~I~l~~~~~-------~~p~~l---~~~i~~~~~~g~~v~~~----v-~t~eea----~~a~~~G--ad~Ig 154 (229)
T 3q58_A 96 ALAQAGADIIAFDASFR-------SRPVDI---DSLLTRIRLHGLLAMAD----C-STVNEG----ISCHQKG--IEFIG 154 (229)
T ss_dssp HHHHHTCSEEEEECCSS-------CCSSCH---HHHHHHHHHTTCEEEEE----C-SSHHHH----HHHHHTT--CSEEE
T ss_pred HHHHcCCCEEEECcccc-------CChHHH---HHHHHHHHHCCCEEEEe----c-CCHHHH----HHHHhCC--CCEEE
Confidence 99999999887643110 112233 44455666667654332 2 355554 3445677 67775
Q ss_pred ee--eeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccC-hhHHHHHHHcCCceEeeCCccc
Q 020848 203 IN--ALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFS-MPEQALCFLAGANSIFTGEKLL 273 (320)
Q Consensus 203 ~~--~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~-~~~~~~~~~~Gan~~~~~~~~~ 273 (320)
+. .|.+ ++ ....++.+. ++.+ +.. +.. -++.| ++. +..-...+..||+.++.|..+.
T Consensus 155 ~~~~g~t~--~~---~~~~~~~~l-i~~l---~~~--~ip-vIA~G--GI~t~~d~~~~~~~GadgV~VGsai~ 214 (229)
T 3q58_A 155 TTLSGYTG--PI---TPVEPDLAM-VTQL---SHA--GCR-VIAEG--RYNTPALAANAIEHGAWAVTVGSAIT 214 (229)
T ss_dssp CTTTTSSS--SC---CCSSCCHHH-HHHH---HTT--TCC-EEEES--SCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred ecCccCCC--CC---cCCCCCHHH-HHHH---HHc--CCC-EEEEC--CCCCHHHHHHHHHcCCCEEEEchHhc
Confidence 42 2222 21 112233322 2222 111 211 22222 222 3434567788999999986443
No 325
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=62.50 E-value=47 Score=28.28 Aligned_cols=120 Identities=11% Similarity=0.044 Sum_probs=68.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc--hhHHHHHHHHHHhhh---cCceEEEeCCC-CCHHH---HHHHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGM-LEKHQ---AIELKK 126 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~--~~~~~l~~~i~~~k~---~~~~i~~~~g~-l~~e~---l~~L~~ 126 (320)
++.+.+.+.++.+.+.|++.+++.|.+ ||- +..++-.++++.+.+ -.+++.+..|. -+.+. .+...+
T Consensus 20 iD~~~l~~lv~~li~~Gv~gl~v~Gtt----GE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~ 95 (292)
T 3daq_A 20 VNLEALKAHVNFLLENNAQAIIVNGTT----AESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKA 95 (292)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEESSGG----GTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----cccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHH
Confidence 789999999999999999999886532 442 334555555555442 24666666664 33443 445566
Q ss_pred hccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeeeEEE---EeCCCHHHHHHH
Q 020848 127 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGGII---GLGEAEEDRVGL 187 (320)
Q Consensus 127 aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~-~Gi~v~~~~i~---Glget~ed~~~~ 187 (320)
+|+|.+.+..-.+ . +.+-+..++-.+.+.+ .++++-+.-+- |..-+.+.+.++
T Consensus 96 ~Gadavlv~~P~y----~----~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~L 152 (292)
T 3daq_A 96 LGADAIMLITPYY----N----KTNQRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIEPETVEIL 152 (292)
T ss_dssp HTCSEEEEECCCS----S----CCCHHHHHHHHHHHHHHHCSCEEEEECHHHHSCCCCHHHHHHH
T ss_pred cCCCEEEECCCCC----C----CCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHH
Confidence 7999887643211 1 1234444555554333 36775444332 223454444433
No 326
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=62.41 E-value=15 Score=32.40 Aligned_cols=43 Identities=21% Similarity=0.176 Sum_probs=29.9
Q ss_pred CHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 151 SYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 151 ~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
.....++....+.+.|+.+.++.++ +++.-.+...+.++..++
T Consensus 270 Git~~~~i~~~A~~~gi~~~~~~~~--~es~i~~~a~~hlaaa~~ 312 (354)
T 3jva_A 270 GIHEALKINQICETAGIECMIGCMA--EETTIGITAAAHLAAAQK 312 (354)
T ss_dssp SHHHHHHHHHHHHHTTCEEEECCCT--TCCHHHHHHHHHHHHHCT
T ss_pred CHHHHHHHHHHHHHcCCeEEecCCC--cccHHHHHHHHHHHhcCC
Confidence 5777788888899999887554433 366666667777666654
No 327
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Probab=62.34 E-value=80 Score=27.56 Aligned_cols=124 Identities=15% Similarity=0.175 Sum_probs=68.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc--hhHHHHHHHHHH-hh--hcCceEEEeCCC----------CCHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKD-IR--DMGMEVCCTLGM----------LEKHQ 120 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~--~~~~~l~~~i~~-~k--~~~~~i~~~~g~----------l~~e~ 120 (320)
.+.++..+.++.+.+.|++.|--. ..+|.+ ..=+.+-+.++. +. ...+-+.+-.|. .+.+.
T Consensus 61 ~~~~~~~~~l~~Al~~Gi~~~DTA----~~Yg~~~G~sE~~lG~al~~~~~~~R~~v~I~TK~g~~~~~~~~~~~~s~~~ 136 (353)
T 3erp_A 61 TRVENSRALLQRAFDLGITHFDLA----NNYGPPPGSAECNFGRILQEDFLPWRDELIISTKAGYTMWDGPYGDWGSRKY 136 (353)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEECC----TTCTTTTTHHHHHHHHHHHHHTGGGGGGCEEEEEESSCCSSSTTSSTTCHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEECh----hhhCCCCChHHHHHHHHHHhhccCCCCeEEEEeeeccCCCCCcccCCCCHHH
Confidence 477899999999999999877321 223310 112345555553 11 223333322221 13443
Q ss_pred H-----HHHHHhccCeeccCc-cccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEe-CCCHHHHHHHHHHHhc
Q 020848 121 A-----IELKKAGLTAYNHNL-DTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL-GEAEEDRVGLLHTLAT 193 (320)
Q Consensus 121 l-----~~L~~aGld~v~i~l-et~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl-get~ed~~~~l~~l~~ 193 (320)
+ +-|+++|+|+|-+-+ ... .....+++.+++++.+++.|.- . -+|+ +.+.+++.+.+..+.+
T Consensus 137 i~~~~e~SL~rLg~dyiDl~~lH~p-------~~~~~~~e~~~aL~~l~~~Gki-r---~iGvSn~~~~~l~~~~~~~~~ 205 (353)
T 3erp_A 137 LIASLDQSLKRMGLEYVDIFYHHRP-------DPETPLKETMKALDHLVRHGKA-L---YVGISNYPADLARQAIDILED 205 (353)
T ss_dssp HHHHHHHHHHHHTCSCEEEEEECSC-------CTTSCHHHHHHHHHHHHHTTSE-E---EEEEESCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCeEeEEEecCC-------CCCCCHHHHHHHHHHHHHCCCc-c---EEEecCCCHHHHHHHHHHHHH
Confidence 3 346777887776532 110 1123567788888888888842 1 2344 5567777777666654
Q ss_pred C
Q 020848 194 L 194 (320)
Q Consensus 194 l 194 (320)
.
T Consensus 206 ~ 206 (353)
T 3erp_A 206 L 206 (353)
T ss_dssp H
T ss_pred c
Confidence 3
No 328
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=62.23 E-value=59 Score=28.54 Aligned_cols=40 Identities=23% Similarity=0.123 Sum_probs=26.7
Q ss_pred CCHHHHHHHHHHHHHcCCeeeeeEEEEe-CCCHHHHHHHHHHHhcC
Q 020848 150 RSYDERLETLKHVREAGINVCSGGIIGL-GEAEEDRVGLLHTLATL 194 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl-get~ed~~~~l~~l~~l 194 (320)
..+...++.++.|++.|+.+ +++. .++.=.....+.++ .+
T Consensus 268 GGit~~~~i~~~A~~~g~~~----~~~~~~es~i~~aa~~hla-a~ 308 (368)
T 1sjd_A 268 GGYLEARRVHDVCAAHGIPV----WCGGMIETGLGRAANVALA-SL 308 (368)
T ss_dssp TSHHHHHHHHHHHHHTTCCE----EECCCCCCHHHHHHHHHHH-TS
T ss_pred CCHHHHHHHHHHHHHcCCcE----EeCCccccHHHHHHHHHHH-cC
Confidence 46888899999999999885 2333 35554455555555 44
No 329
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=62.01 E-value=17 Score=33.06 Aligned_cols=98 Identities=9% Similarity=-0.029 Sum_probs=49.1
Q ss_pred hHHHHHHHHHHhhhcCce-EEEeCCCCCHHHHHHHHHhccCeeccC----ccccHHHHhhhCC------------CCCHH
Q 020848 91 NFNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKAGLTAYNHN----LDTSREFYSKIIT------------TRSYD 153 (320)
Q Consensus 91 ~~~~l~~~i~~~k~~~~~-i~~~~g~l~~e~l~~L~~aGld~v~i~----let~~~~~~~i~~------------~~~~~ 153 (320)
..++..++++.+.+.++. +.-....-+.+.+++|++. . .+.+. +.+..+..+.+.. -....
T Consensus 215 t~~~A~~~~~~Le~~~i~~iEeP~~~~~~~~~~~l~~~-~-~iPIa~dE~~~~~~~~~~~l~~g~~D~v~~d~~~~GGit 292 (433)
T 3rcy_A 215 TTAGAIRLGQAIEPYSPLWYEEPVPPDNVGAMAQVARA-V-RIPVATGERLTTKAEFAPVLREGAAAILQPALGRAGGIW 292 (433)
T ss_dssp CHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHH-S-SSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTHHH
T ss_pred CHHHHHHHHHHhhhcCCCEEECCCChhhHHHHHHHHhc-c-CCCEEecCCCCCHHHHHHHHHcCCCCEEEeCchhcCCHH
Confidence 456666666776665554 2221122345666666664 1 12221 1111111111111 12356
Q ss_pred HHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcC
Q 020848 154 ERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 194 (320)
Q Consensus 154 ~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 194 (320)
..++....|...|+.+.++.. ++.=.+...+.+...+
T Consensus 293 ~~~kia~lA~~~gv~~~~h~~----~s~i~~aa~lhlaaa~ 329 (433)
T 3rcy_A 293 EMKKVAAMAEVYNAQMAPHLY----AGPVEWAANVHFAASI 329 (433)
T ss_dssp HHHHHHHHHHTTTCEECCCCS----SCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCEEEecCC----CCHHHHHHHHHHHHHh
Confidence 667777778888888776642 3444445555555544
No 330
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=61.86 E-value=40 Score=29.16 Aligned_cols=108 Identities=7% Similarity=-0.011 Sum_probs=64.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc--hhHHHHHHHHHHhhh---cCceEEEeCCC-CCHHH---HHHHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGM-LEKHQ---AIELKK 126 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~--~~~~~l~~~i~~~k~---~~~~i~~~~g~-l~~e~---l~~L~~ 126 (320)
++.+.+.+.++.+.+.|++.+++.|.+ ||- +..++-.++++.+.+ -.+++.+..|. -+.+. .+...+
T Consensus 29 iD~~~l~~lv~~li~~Gv~gl~v~GtT----GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~ 104 (318)
T 3qfe_A 29 LDLASQERYYAYLARSGLTGLVILGTN----AEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASV 104 (318)
T ss_dssp ECHHHHHHHHHHHHTTTCSEEEESSGG----GTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCccc----cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHH
Confidence 789999999999999999999886532 442 345555666665542 24666666665 33433 445567
Q ss_pred hccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeeeE
Q 020848 127 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGG 173 (320)
Q Consensus 127 aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~-~Gi~v~~~~ 173 (320)
+|+|.+.+-.-.+ |. ++.+-+..++-.+.+.+ .++++-+.-
T Consensus 105 ~Gadavlv~~P~y---~~---kp~~~~~l~~~f~~ia~a~~lPiilYn 146 (318)
T 3qfe_A 105 AGANYVLVLPPAY---FG---KATTPPVIKSFFDDVSCQSPLPVVIYN 146 (318)
T ss_dssp HTCSEEEECCCCC---------CCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred cCCCEEEEeCCcc---cC---CCCCHHHHHHHHHHHHhhCCCCEEEEe
Confidence 7999887643211 11 12244555555555443 466654433
No 331
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=61.85 E-value=50 Score=28.53 Aligned_cols=106 Identities=12% Similarity=-0.011 Sum_probs=64.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc--hhHHHHHHHHHHhhh---cCceEEEeCCC-CCHHH---HHHHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGM-LEKHQ---AIELKK 126 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~--~~~~~l~~~i~~~k~---~~~~i~~~~g~-l~~e~---l~~L~~ 126 (320)
++.+.+.+.++.+.+.|++.+++.|.+ ||- +..++-.++++.+.+ -.+++.+..|. -+.+. .+...+
T Consensus 42 iD~~~l~~lv~~li~~Gv~Gi~v~GtT----GE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~ 117 (315)
T 3na8_A 42 LDLPALGRSIERLIDGGVHAIAPLGST----GEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAES 117 (315)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEECSSGG----GTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHh
Confidence 789999999999999999999875532 442 344555566655542 24666666664 33443 445567
Q ss_pred hccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeeeE
Q 020848 127 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGG 173 (320)
Q Consensus 127 aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~-~Gi~v~~~~ 173 (320)
+|+|.+.+-.-.+ . +.+.+..++-.+.+.+ .++++.+.-
T Consensus 118 ~Gadavlv~~P~y----~----~~s~~~l~~~f~~va~a~~lPiilYn 157 (315)
T 3na8_A 118 LGAEAVMVLPISY----W----KLNEAEVFQHYRAVGEAIGVPVMLYN 157 (315)
T ss_dssp TTCSEEEECCCCS----S----CCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred cCCCEEEECCCCC----C----CCCHHHHHHHHHHHHHhCCCcEEEEe
Confidence 7999887743221 1 1244555555555444 466654433
No 332
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=61.83 E-value=53 Score=27.93 Aligned_cols=76 Identities=11% Similarity=0.014 Sum_probs=49.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc--hhHHHHHHHHHHhhh---cCceEEEeCCCC-CHHH---HHHHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGML-EKHQ---AIELKK 126 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~--~~~~~l~~~i~~~k~---~~~~i~~~~g~l-~~e~---l~~L~~ 126 (320)
++.+.+.+.++.+.+.|+..+++.|.+ ||- +..++-.++++.+.+ -.+++.+..|.. +.+. .+...+
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~Gtt----GE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~ 94 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVCGTT----GEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAES 94 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSGG----GTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHh
Confidence 788999999999999999999885532 332 344555555555442 246666666653 3444 444566
Q ss_pred hccCeeccC
Q 020848 127 AGLTAYNHN 135 (320)
Q Consensus 127 aGld~v~i~ 135 (320)
+|.|.+.+.
T Consensus 95 ~Gadavlv~ 103 (291)
T 3a5f_A 95 IGVDGLLVI 103 (291)
T ss_dssp TTCSEEEEE
T ss_pred cCCCEEEEc
Confidence 799987763
No 333
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=61.78 E-value=55 Score=31.91 Aligned_cols=112 Identities=13% Similarity=0.083 Sum_probs=72.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEE---ecccCCCCC----------CchhHHHHHHHHHHhhhcCceEEEe---CCC---C
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCM---GAAWRDTIG----------RKTNFNQILEYVKDIRDMGMEVCCT---LGM---L 116 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l---~~g~~~~~g----------e~~~~~~l~~~i~~~k~~~~~i~~~---~g~---l 116 (320)
.+.+...+.++.+.++|+..+++ -.|+....| .|..=-+|.++++..++.|+.+..- .+. .
T Consensus 368 ~nte~~K~YIDFAA~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~sKGV~iilw~~t~~~~~n~ 447 (738)
T 2d73_A 368 ANTANVKRYIDFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARKGIKMMMHHETSASVRNY 447 (738)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHHTTCEEEEEEECTTBHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHhCCCEEEEEEcCCCchhhH
Confidence 68999999999999999999988 444432111 1111113788888998888875432 331 1
Q ss_pred ---CHHHHHHHHHhccCeeccCccccHHHHhhhCCC-----C-CHHHHHHHHHHHHHcCCeeeee
Q 020848 117 ---EKHQAIELKKAGLTAYNHNLDTSREFYSKIITT-----R-SYDERLETLKHVREAGINVCSG 172 (320)
Q Consensus 117 ---~~e~l~~L~~aGld~v~i~let~~~~~~~i~~~-----~-~~~~~l~~i~~a~~~Gi~v~~~ 172 (320)
-++.++.+++.|+..|-++.=+- .+.+. + ...-..+.++.|.+.++-|..|
T Consensus 448 e~~~d~~f~~~~~~Gv~GVKvdF~g~-----~~~r~~~h~~Q~~v~~Y~~i~~~AA~~~LmVnfH 507 (738)
T 2d73_A 448 ERHMDKAYQFMADNGYNSVKSGYVGN-----IIPRGEHHYGQWMNNHYLYAVKKAADYKIMVNAH 507 (738)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCSS-----CBSTTCCTTSHHHHHHHHHHHHHHHHTTCEEEET
T ss_pred HHHHHHHHHHHHHcCCCEEEeCcccc-----CcCCcccccchHHHHHHHHHHHHHHHcCcEEEcc
Confidence 24578888999999988764210 01111 1 2345577888888888776665
No 334
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=61.73 E-value=10 Score=34.18 Aligned_cols=99 Identities=13% Similarity=0.091 Sum_probs=53.2
Q ss_pred hHHHHHHHHHHhhhcCceE-EEeCCCCCHHHHHHHHHhccCeeccC-cccc--H-HHHhhhCCC------------CCHH
Q 020848 91 NFNQILEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKAGLTAYNHN-LDTS--R-EFYSKIITT------------RSYD 153 (320)
Q Consensus 91 ~~~~l~~~i~~~k~~~~~i-~~~~g~l~~e~l~~L~~aGld~v~i~-let~--~-~~~~~i~~~------------~~~~ 153 (320)
..++..++++.+.+.++.. .-....-+.+.+++|++. + .+.+. -|+. + +..+.+..+ ....
T Consensus 221 ~~~~ai~~~~~l~~~~i~~iE~P~~~~d~~~~~~l~~~-~-~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 298 (403)
T 2ox4_A 221 DLVSAIQFAKAIEEFNIFFYEEINTPLNPRLLKEAKKK-I-DIPLASGERIYSRWGFLPFLEDRSIDVIQPDLGTCGGFT 298 (403)
T ss_dssp CHHHHHHHHHHHGGGCEEEEECCSCTTSTHHHHHHHHT-C-CSCEEECTTCCHHHHHHHHHHTTCCSEECCCHHHHTHHH
T ss_pred CHHHHHHHHHHHHhhCCCEEeCCCChhhHHHHHHHHHh-C-CCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHH
Confidence 4567777777777766652 221222355677777765 2 23332 1222 1 222222111 2456
Q ss_pred HHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 154 ERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 154 ~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
..++.++.|++.|+.+.++.+. +.=-....+.++..++
T Consensus 299 e~~~i~~~A~~~g~~~~~h~~~----s~i~~aa~~hlaaa~~ 336 (403)
T 2ox4_A 299 EFKKIADMAHIFEVTVQAHVAG----TGVAEAASLHAEIAIP 336 (403)
T ss_dssp HHHHHHHHHHHTTCEECCCCCS----CHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHcCCEEeecCCC----CHHHHHHHHHHHHhCC
Confidence 6688888889999987666441 4334455555555553
No 335
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=61.71 E-value=32 Score=30.74 Aligned_cols=98 Identities=14% Similarity=0.074 Sum_probs=55.0
Q ss_pred hHHHHHHHHHHhhhcCceE-EEeCCCCCHHHHHHHHHh----ccCeecc------CccccHHHHhh---------hCCCC
Q 020848 91 NFNQILEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKA----GLTAYNH------NLDTSREFYSK---------IITTR 150 (320)
Q Consensus 91 ~~~~l~~~i~~~k~~~~~i-~~~~g~l~~e~l~~L~~a----Gld~v~i------~let~~~~~~~---------i~~~~ 150 (320)
..++..++++.+.+.++.. .-... -+.+.+++|++. |.. +.+ +.+.+.+..+. +.+-
T Consensus 213 ~~~~ai~~~~~l~~~~i~~iE~P~~-~d~~~~~~l~~~l~~~g~~-iPIa~dE~~~~~~~~~~i~~~~~d~v~ik~~~~- 289 (392)
T 3p3b_A 213 NLNLTKEVLAALSDVNLYWLEEAFH-EDEALYEDLKEWLGQRGQN-VLIADGEGLASPHLIEWATRGRVDVLQYDIIWP- 289 (392)
T ss_dssp CHHHHHHHHHHTTTSCEEEEECSSS-CCHHHHHHHHHHHHHHTCC-CEEEECCSSCCTTHHHHHHTTSCCEECCBTTTB-
T ss_pred CHHHHHHHHHHHHhcCCCEEecCCc-ccHHHHHHHHHhhccCCCC-ccEEecCCCCHHHHHHHHHcCCCCEEEeCcccc-
Confidence 4566777777776666542 21112 356677777765 221 121 22222222211 1122
Q ss_pred CHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 151 SYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 151 ~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
.....++.++.|++.|+.+.++ + .++.-.+...+.+...++
T Consensus 290 Git~~~~i~~~A~~~gi~~~~h-~---~es~i~~~a~l~laa~~~ 330 (392)
T 3p3b_A 290 GFTHWMELGEKLDAHGLRSAPH-C---YGNAYGIYASGHLSAAVR 330 (392)
T ss_dssp CHHHHHHHHHHHHHTTCEECCB-C---CSCTHHHHHHHHHGGGCT
T ss_pred CHHHHHHHHHHHHHcCCEEEec-C---CCCHHHHHHHHHHHHhCC
Confidence 6788889999999999987666 3 355555666666666554
No 336
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=61.69 E-value=53 Score=27.90 Aligned_cols=121 Identities=11% Similarity=0.065 Sum_probs=69.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc--hhHHHHHHHHHHhhh---cCceEEEeCCCC-CHHH---HHHHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGML-EKHQ---AIELKK 126 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~--~~~~~l~~~i~~~k~---~~~~i~~~~g~l-~~e~---l~~L~~ 126 (320)
++.+.+.+.++.+.+.|++.+++.|.+ ||- +..++-.++++.+.+ -.+++.+..|.. +.+. .+...+
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~Gtt----GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~ 93 (289)
T 2yxg_A 18 VDFDGLEENINFLIENGVSGIVAVGTT----GESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAED 93 (289)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEEESSTT----TTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHh
Confidence 788999999999999999999886532 443 344555555555442 246776666653 3444 444566
Q ss_pred hccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeeeEEEEe---CCCHHHHHHHH
Q 020848 127 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGGIIGL---GEAEEDRVGLL 188 (320)
Q Consensus 127 aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~-~Gi~v~~~~i~Gl---get~ed~~~~l 188 (320)
+|.|.+.+..-. |. +.+-+...+-.+...+ .++++-+.-+.+. .-+.+.+.++.
T Consensus 94 ~Gadavlv~~P~----y~----~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La 151 (289)
T 2yxg_A 94 VGADAVLSITPY----YN----KPTQEGLRKHFGKVAESINLPIVLYNVPSRTAVNLEPKTVKLLA 151 (289)
T ss_dssp HTCSEEEEECCC----SS----CCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred cCCCEEEECCCC----CC----CCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 799988764311 11 1244555555555443 4666543333322 23555544443
No 337
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=61.63 E-value=41 Score=28.16 Aligned_cols=79 Identities=16% Similarity=0.135 Sum_probs=48.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccC----------------------CCCCCch-hH-HHHHHHHHHhhh-cCceEE
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWR----------------------DTIGRKT-NF-NQILEYVKDIRD-MGMEVC 110 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~----------------------~~~ge~~-~~-~~l~~~i~~~k~-~~~~i~ 110 (320)
+++|++.+.++.+.+.|...+.+..... +..|... .- ..+.+.++.+++ .++++.
T Consensus 131 l~~ee~~~~~~~~~~~gl~~i~l~~p~t~~~rl~~ia~~a~gfiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~~~pv~ 210 (262)
T 2ekc_A 131 LPPEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAADEMTYFVSVTGTTGAREKLPYERIKKKVEEYRELCDKPVV 210 (262)
T ss_dssp CCHHHHHHHHHHHHHTTCEECCEECTTCCHHHHHHHHHHCSSCEEEESSCC---------CHHHHHHHHHHHHHCCSCEE
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCCCCEEEEecCCccCCCCCcCcccHHHHHHHHHhhcCCCEE
Confidence 5678877777777777765554443211 0112111 11 456677778774 367777
Q ss_pred EeCCCCCHHHHHHHHHhccCeeccC
Q 020848 111 CTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 111 ~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
+..|.-+.+.++.+ .+|.|.+-++
T Consensus 211 vG~GI~t~e~~~~~-~~gADgvIVG 234 (262)
T 2ekc_A 211 VGFGVSKKEHAREI-GSFADGVVVG 234 (262)
T ss_dssp EESSCCSHHHHHHH-HTTSSEEEEC
T ss_pred EeCCCCCHHHHHHH-HcCCCEEEEC
Confidence 88888889998884 6678888776
No 338
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=61.51 E-value=71 Score=26.73 Aligned_cols=190 Identities=13% Similarity=0.141 Sum_probs=101.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhc-CceEEEeCCCCCHHHHHHHHHh--ccCee
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM-GMEVCCTLGMLEKHQAIELKKA--GLTAY 132 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~-~~~i~~~~g~l~~e~l~~L~~a--Gld~v 132 (320)
.+++.+++.++...+.|..-+-+++|... . ..-+++.+++..+++. ++++++ .....+.++.-.++ |.+-|
T Consensus 22 ~~~~~a~~~a~~~v~~GAdiIDIg~g~~~-v---~~~ee~~rvv~~i~~~~~~pisI--DT~~~~v~~aAl~a~~Ga~iI 95 (262)
T 1f6y_A 22 RDPAPVQEWARRQEEGGARALDLNVGPAV-Q---DKVSAMEWLVEVTQEVSNLTLCL--DSTNIKAIEAGLKKCKNRAMI 95 (262)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEBCC--------CHHHHHHHHHHHHHTTCCSEEEE--ECSCHHHHHHHHHHCSSCEEE
T ss_pred CCHHHHHHHHHHHHHCCCcEEEECCCCCC-C---ChHHHHHHHHHHHHHhCCCeEEE--eCCCHHHHHHHHhhCCCCCEE
Confidence 68899999999999999988888775321 1 2345555666666543 555544 34578888887777 87666
Q ss_pred c-cCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEE--EEeCCCHHHH----HHHHHHHhcCCCCCCeeeeee
Q 020848 133 N-HNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGI--IGLGEAEEDR----VGLLHTLATLPTHPESVPINA 205 (320)
Q Consensus 133 ~-i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i--~Glget~ed~----~~~l~~l~~l~~~~~~v~~~~ 205 (320)
+ ++. . .+...+.+..+.+.|..+.+--+ -|..++.++. .+.++.+.+.|...+.+-+-+
T Consensus 96 Ndvs~------------~--~d~~~~~~~~~a~~~~~vvlmh~~~~G~p~t~~~~~~~~~~~~~~a~~~Gi~~~~IilDP 161 (262)
T 1f6y_A 96 NSTNA------------E--REKVEKLFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAMELVAAADEFGLPMEDLYIDP 161 (262)
T ss_dssp EEECS------------C--HHHHHHHHHHHHHTTCEEEEESCCSSCSCSSHHHHHHHHHHHHHHHHHHTCCGGGEEEEC
T ss_pred EECCC------------C--cccHHHHHHHHHHhCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEeC
Confidence 5 332 1 12223455667788876432222 2444455554 445556666773233454443
Q ss_pred eeecCCCCCCCCCCCCHHHHHHHHHHHHHhC-CCceeecCCcccccC-h-------hHHHHHHHcCCceEeeCC
Q 020848 206 LLAVKGTPLQDQKPVEIWEMIRMIATARIVM-PKAMVRLSAGRVRFS-M-------PEQALCFLAGANSIFTGE 270 (320)
Q Consensus 206 ~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~-p~~~i~~~~g~~~~~-~-------~~~~~~~~~Gan~~~~~~ 270 (320)
.+ | ++.. ..-...+.++.+...+..+ |...+-+..++.++. + .....++.+|++......
T Consensus 162 g~---g-~~g~-~~~~~~~~l~~l~~l~~~~~pg~pvl~G~Srksfg~~~~~~l~~t~~~~a~~~g~~~~iv~~ 230 (262)
T 1f6y_A 162 LI---L-PANV-AQDHAPEVLKTLQQIKMLADPAPKTVLGLSNVSQNCQNRPLINRTFLAMAMACGLMSAIADA 230 (262)
T ss_dssp CC---C-CTTT-CTTHHHHHHHHHHHHHTCCSSCCEEEEEGGGGGTTCSSHHHHHHHHHHHHHHTTCCEEEECT
T ss_pred CC---C-cCCC-ChHHHHHHHHHHHHHHHHhCCCCCEEEeecCCcCCCCHHHHHHHHHHHHHHHHhCCeEEECc
Confidence 32 1 1211 1122345566666566544 443222222222222 1 122345667777665553
No 339
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=61.40 E-value=20 Score=30.99 Aligned_cols=67 Identities=12% Similarity=0.160 Sum_probs=35.4
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh---hcCceEEEeCCCCCHHHHHHHHHh
Q 020848 55 LMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR---DMGMEVCCTLGMLEKHQAIELKKA 127 (320)
Q Consensus 55 ~~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k---~~~~~i~~~~g~l~~e~l~~L~~a 127 (320)
..+.++..+.++.+++.|.. +.+.+-+. ......+-+.|++.+ +.|.....-.+..+.+.++++.++
T Consensus 140 l~~~~e~~~rI~Aa~~A~~~-~~I~ARtd-----a~~~~g~~~ai~Ra~ay~eAGAD~i~~e~~~~~~~~~~i~~~ 209 (305)
T 3ih1_A 140 LVTTEELVQKIKAIKEVAPS-LYIVARTD-----ARGVEGLDEAIERANAYVKAGADAIFPEALQSEEEFRLFNSK 209 (305)
T ss_dssp BCCHHHHHHHHHHHHHHCTT-SEEEEEEC-----CHHHHCHHHHHHHHHHHHHHTCSEEEETTCCSHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCC-eEEEEeec-----cccccCHHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHH
Confidence 36778888888877777653 33333110 111122444444443 446554444455566777777654
No 340
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=61.40 E-value=91 Score=27.93 Aligned_cols=135 Identities=16% Similarity=0.119 Sum_probs=71.5
Q ss_pred HHHHHcCCCEEEEecccCCC--CCC-----chhHHHHHHHHHHhhhcCceEEEe---------CCC--------------
Q 020848 66 QKAKEAGSTRFCMGAAWRDT--IGR-----KTNFNQILEYVKDIRDMGMEVCCT---------LGM-------------- 115 (320)
Q Consensus 66 ~~~~~~g~~~i~l~~g~~~~--~ge-----~~~~~~l~~~i~~~k~~~~~i~~~---------~g~-------------- 115 (320)
+.+++.|+..|-+---..+. .|+ ....+++.++++++++.|+.+++. ++.
T Consensus 55 ~ilk~~G~N~VRlrvwv~p~~~~g~~y~~g~~d~~~~~~~a~~Ak~~GLkVlldfHysD~WadPg~Q~~P~aW~~~~~~~ 134 (399)
T 1ur4_A 55 KTLKEAGVNYVRVRIWNDPYDANGNGYGGGNNDLEKAIQIGKRATANGMKLLADFHYSDFWADPAKQKAPKAWANLNFED 134 (399)
T ss_dssp HHHHHTTCCEEEEEECSCCBCTTCCBCSTTCCCHHHHHHHHHHHHHTTCEEEEEECSSSSCCSSSCCCCCGGGTTCCHHH
T ss_pred HHHHHCCCCEEEEeeecCCcccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEeccCCccCCcccccCccccccCCHHH
Confidence 34455899888762111111 011 135789999999999999987654 221
Q ss_pred -------CCHHHHHHHHHhcc--CeeccCccccHHHHhhhCCCCCHHHHHHHH----HHHHHc--CCeeeeeEEEEeCCC
Q 020848 116 -------LEKHQAIELKKAGL--TAYNHNLDTSREFYSKIITTRSYDERLETL----KHVREA--GINVCSGGIIGLGEA 180 (320)
Q Consensus 116 -------l~~e~l~~L~~aGl--d~v~i~let~~~~~~~i~~~~~~~~~l~~i----~~a~~~--Gi~v~~~~i~Glget 180 (320)
.+.+.++.|++.|. +.|.++=|.. ..+.....++...+.+ +.+++. +.+|.+++.- +.+
T Consensus 135 l~~~~~~yt~~~l~~l~~~g~~~~~vqvGNEi~----~g~~~~~~~~~la~ll~ag~~aVR~v~p~~~V~ih~~~--~~~ 208 (399)
T 1ur4_A 135 KKTALYQYTKQSLKAMKAAGIDIGMVQVGNETN----GGLAGETDWAKMSQLFNAGSQAVRETDSNILVALHFTN--PET 208 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCEEEEEESSSCS----SCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEEECC--TTS
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcEEEEccccc----cccCCcccHHHHHHHHHHHHHHHHHhCCCCeEEEEeCC--Ccc
Confidence 12345667777774 4555554432 1122234555543333 334443 2333222211 333
Q ss_pred HHHHHHHHHHHhcCCCCCCeeeeeee
Q 020848 181 EEDRVGLLHTLATLPTHPESVPINAL 206 (320)
Q Consensus 181 ~ed~~~~l~~l~~l~~~~~~v~~~~~ 206 (320)
.+.+...++.+...+.+.|.|+++.|
T Consensus 209 ~~~~~~~~d~l~~~g~d~DvIG~syY 234 (399)
T 1ur4_A 209 SGRYAWIAETLHRHHVDYDVFASSYY 234 (399)
T ss_dssp TTHHHHHHHHHHHTTCCCSEEEEEEC
T ss_pred hHHHHHHHHHHHHcCCCcCeEeEecC
Confidence 33445555666667766788888744
No 341
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=61.35 E-value=16 Score=32.43 Aligned_cols=42 Identities=19% Similarity=0.178 Sum_probs=26.9
Q ss_pred CCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcC
Q 020848 150 RSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 194 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 194 (320)
..+...++.+..+.+.|+.+.++.++ ++.=-+...+.++..+
T Consensus 274 GGit~~~~i~~~A~~~gi~~~~~~~~---es~ig~aa~~hlaaa~ 315 (365)
T 3ik4_A 274 AGVAEGLKMIAIAQAAGLGLMIGGMV---ESILAMSFSANLAAGN 315 (365)
T ss_dssp HCHHHHHHHHHHHHHHTCEEEECCSS---CCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCeEEecCCc---ccHHHHHHHHHHHHhC
Confidence 45677788888888899887666544 4443445555555444
No 342
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=61.26 E-value=70 Score=26.52 Aligned_cols=184 Identities=13% Similarity=0.116 Sum_probs=92.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCCCC-CCc-------------hhHHHHHHHHHHhhhc-CceEEEeCCCCCHH--
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTI-GRK-------------TNFNQILEYVKDIRDM-GMEVCCTLGMLEKH-- 119 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l~~g~~~~~-ge~-------------~~~~~l~~~i~~~k~~-~~~i~~~~g~l~~e-- 119 (320)
+.++..+.++.+.+.|++.+.++.....+. ..| .......+.++.+++. ++++.... ..+..
T Consensus 30 ~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~~~Pv~~m~-~~~~~~~ 108 (262)
T 1rd5_A 30 DLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELSCPVVLLS-YYKPIMF 108 (262)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGCSSCEEEEC-CSHHHHS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEEEe-cCcHHHH
Confidence 357888888888899999998864211110 001 1346677888888853 56643321 11111
Q ss_pred -HHHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCC
Q 020848 120 -QAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHP 198 (320)
Q Consensus 120 -~l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~ 198 (320)
.++.++++|+|.+.+.-... +...+.++.+++.|++.. +.+....+.+.+....... .
T Consensus 109 ~~~~~a~~aGadgv~v~d~~~-------------~~~~~~~~~~~~~g~~~i--~~~a~~t~~e~~~~~~~~~------~ 167 (262)
T 1rd5_A 109 RSLAKMKEAGVHGLIVPDLPY-------------VAAHSLWSEAKNNNLELV--LLTTPAIPEDRMKEITKAS------E 167 (262)
T ss_dssp CCTHHHHHTTCCEEECTTCBT-------------TTHHHHHHHHHHTTCEEC--EEECTTSCHHHHHHHHHHC------C
T ss_pred HHHHHHHHcCCCEEEEcCCCh-------------hhHHHHHHHHHHcCCceE--EEECCCCCHHHHHHHHhcC------C
Confidence 13448999999888742111 123455567788887732 2221232333333333222 1
Q ss_pred CeeeeeeeeecCC-CCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccC-hhHHHHHHHcCCceEeeCCcc
Q 020848 199 ESVPINALLAVKG-TPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFS-MPEQALCFLAGANSIFTGEKL 272 (320)
Q Consensus 199 ~~v~~~~~~p~~g-t~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~-~~~~~~~~~~Gan~~~~~~~~ 272 (320)
..+.+. +.+| |.-.. ... ....+.+...|...+ ..+-+. .++. ++.....+.+||+.++.|..+
T Consensus 168 g~v~~~---s~~G~tG~~~--~~~-~~~~~~i~~v~~~~~-~pI~vg---GGI~~~e~~~~~~~~GAdgvvVGSai 233 (262)
T 1rd5_A 168 GFVYLV---SVNGVTGPRA--NVN-PRVESLIQEVKKVTN-KPVAVG---FGISKPEHVKQIAQWGADGVIIGSAM 233 (262)
T ss_dssp SCEEEE---CSSCCBCTTS--CBC-THHHHHHHHHHHHCS-SCEEEE---SCCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred CeEEEe---cCCCCCCCCc--CCC-chHHHHHHHHHhhcC-CeEEEE---CCcCCHHHHHHHHHcCCCEEEEChHH
Confidence 123332 2333 22111 111 223344444444432 222222 2333 344445567899999888644
No 343
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=61.16 E-value=23 Score=29.07 Aligned_cols=71 Identities=15% Similarity=0.195 Sum_probs=47.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCC--CCCCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHh-----
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRD--TIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKA----- 127 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~--~~ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~a----- 127 (320)
.+.+|+.+. +.+.|+..+.+++-... ..| + . +++++.++ ..++++..+.|..+.+.++++.++
T Consensus 144 ~~~~e~~~~---~~~~G~~~i~~t~~~~~g~~~g-~-~----~~~i~~l~~~~~iPvia~GGI~~~~d~~~~~~~~~~~~ 214 (241)
T 1qo2_A 144 IDPVSLLKR---LKEYGLEEIVHTEIEKDGTLQE-H-D----FSLTKKIAIEAEVKVLAAGGISSENSLKTAQKVHTETN 214 (241)
T ss_dssp CCHHHHHHH---HHTTTCCEEEEEETTHHHHTCC-C-C----HHHHHHHHHHHTCEEEEESSCCSHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHH---HHhCCCCEEEEEeecccccCCc-C-C----HHHHHHHHHhcCCcEEEECCCCCHHHHHHHHhcccccC
Confidence 456565443 44589988888642110 011 1 2 34445555 347888888899999999999998
Q ss_pred c-cCeeccC
Q 020848 128 G-LTAYNHN 135 (320)
Q Consensus 128 G-ld~v~i~ 135 (320)
| ++.+.++
T Consensus 215 G~adgv~vg 223 (241)
T 1qo2_A 215 GLLKGVIVG 223 (241)
T ss_dssp TSEEEEEEC
T ss_pred CeEeEEEee
Confidence 9 9988876
No 344
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=61.11 E-value=44 Score=29.63 Aligned_cols=75 Identities=17% Similarity=0.138 Sum_probs=48.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecc--cCCC------CCCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHh
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAA--WRDT------IGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKA 127 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g--~~~~------~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~a 127 (320)
.+.+++. .+.+.|++.+.++.+ ...+ .|.| .+..+.++.+..+..++++....|..+.+.+.+...+
T Consensus 158 ~t~e~A~----~a~~aGAD~I~vG~gpGs~~~tr~~~g~g~p-~~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~kala~ 232 (366)
T 4fo4_A 158 ATAEGAR----ALIEAGVSAVKVGIGPGSICTTRIVTGVGVP-QITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAA 232 (366)
T ss_dssp CSHHHHH----HHHHHTCSEEEECSSCSTTBCHHHHHCCCCC-HHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHT
T ss_pred CCHHHHH----HHHHcCCCEEEEecCCCCCCCcccccCcccc-hHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHc
Confidence 4555543 345579988887311 1100 0112 3444555555455668899899999899999999999
Q ss_pred ccCeeccC
Q 020848 128 GLTAYNHN 135 (320)
Q Consensus 128 Gld~v~i~ 135 (320)
|.+.|.++
T Consensus 233 GAd~V~vG 240 (366)
T 4fo4_A 233 GASCVMVG 240 (366)
T ss_dssp TCSEEEES
T ss_pred CCCEEEEC
Confidence 99999875
No 345
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=61.10 E-value=19 Score=32.06 Aligned_cols=76 Identities=13% Similarity=0.101 Sum_probs=41.2
Q ss_pred CceEEEeCCCCCHHHHHHHHHhc-cCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHH
Q 020848 106 GMEVCCTLGMLEKHQAIELKKAG-LTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDR 184 (320)
Q Consensus 106 ~~~i~~~~g~l~~e~l~~L~~aG-ld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~ 184 (320)
++++...-...+.+.++++.+.| +|.+.+.+ .+-..+...++....+.+.|+.+.++.++ ++.=-+
T Consensus 237 ~iPIa~dE~~~~~~~~~~~l~~~~~d~v~ik~----------~~~GGit~~~~ia~~A~~~g~~~~~~~~~---es~i~~ 303 (378)
T 3eez_A 237 SAPVSVDECLVTLQDAARVARDGLAEVFGIKL----------NRVGGLTRAARMRDIALTHGIDMFVMATG---GSVLAD 303 (378)
T ss_dssp CCCEEECTTCCSHHHHHHHHHTTCCSEEEEEH----------HHHTSHHHHHHHHHHHHHTTCEEEEECSS---CSHHHH
T ss_pred CCCEEECCCCCCHHHHHHHHHcCCCCEEEeCc----------hhcCCHHHHHHHHHHHHHcCCEEEcCCCC---CCHHHH
Confidence 34444333334444555444443 44444432 11235677788888899999987655544 343344
Q ss_pred HHHHHHHhcC
Q 020848 185 VGLLHTLATL 194 (320)
Q Consensus 185 ~~~l~~l~~l 194 (320)
...+.++..+
T Consensus 304 aa~~hlaaa~ 313 (378)
T 3eez_A 304 AEALHLAATI 313 (378)
T ss_dssp HHHHHHHHTS
T ss_pred HHHHHHHHhC
Confidence 5555555554
No 346
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=61.09 E-value=62 Score=28.18 Aligned_cols=104 Identities=10% Similarity=0.031 Sum_probs=62.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc--hhHHHHHHHHHHhhh---cCceEEEeCCC-CCHHH---HHHHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGM-LEKHQ---AIELKK 126 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~--~~~~~l~~~i~~~k~---~~~~i~~~~g~-l~~e~---l~~L~~ 126 (320)
++.+.+.+.++.+.+.|+..+++.|.+ ||- +..++-.++++.+.+ -.+++.+..|. -+.+. .+...+
T Consensus 52 iD~~~l~~lv~~li~~Gv~Gl~v~GtT----GE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~ 127 (332)
T 2r8w_A 52 VDIEAFSALIARLDAAEVDSVGILGST----GIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEA 127 (332)
T ss_dssp BCHHHHHHHHHHHHHHTCSEEEESSTT----TTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHh
Confidence 889999999999999999999886532 443 344555566665542 24676665555 33444 445566
Q ss_pred hccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeee
Q 020848 127 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCS 171 (320)
Q Consensus 127 aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~-~Gi~v~~ 171 (320)
+|+|.+.+-.-.+ . +.+-+.+++-.+.+.+ .++++-+
T Consensus 128 ~Gadavlv~~P~Y----~----~~s~~~l~~~f~~VA~a~~lPiil 165 (332)
T 2r8w_A 128 AGADALLLAPVSY----T----PLTQEEAYHHFAAVAGATALPLAI 165 (332)
T ss_dssp HTCSEEEECCCCS----S----CCCHHHHHHHHHHHHHHCSSCEEE
T ss_pred cCCCEEEECCCCC----C----CCCHHHHHHHHHHHHHhcCCCEEE
Confidence 7999887643221 1 1244555555555433 4566533
No 347
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=61.07 E-value=37 Score=30.81 Aligned_cols=116 Identities=13% Similarity=0.113 Sum_probs=69.9
Q ss_pred CCHHHHHHHHHHHHH-cCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeC-CCCCHHHHHHHHHhc-cCee
Q 020848 56 MTKDAVMQAAQKAKE-AGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTL-GMLEKHQAIELKKAG-LTAY 132 (320)
Q Consensus 56 ~s~eei~~~~~~~~~-~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~-g~l~~e~l~~L~~aG-ld~v 132 (320)
+++++.++.++.+.+ .++.-| ..+.. +..++.+.++-+.+. ..+++...- -..+...++++.+.| +|.+
T Consensus 267 ~t~~~ai~~~~~L~~~~~i~~i------EePl~-~~d~~~~~~l~~~~~-~~ipIa~dEl~~~~~~~~~~~i~~~a~d~i 338 (431)
T 2fym_A 267 FTSEEFTHFLEELTKQYPIVSI------EDGLD-ESDWDGFAYQTKVLG-DKIQLVGDDLFVTNTKILKEGIEKGIANSI 338 (431)
T ss_dssp ECHHHHHHHHHHHHHHSCEEEE------ESCSC-TTCHHHHHHHHHHHT-TTSEEEESTTTTTCHHHHHHHHHTTCCSEE
T ss_pred CCHHHHHHHHHHHHHhCCceEE------ECCCC-cccHHHHHHHHHHhC-CCCeEEeCCcccCCHHHHHHHHHhCCCCEE
Confidence 688999998888877 654322 22221 122333333222221 156766554 456788888888776 6777
Q ss_pred ccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHH
Q 020848 133 NHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTL 191 (320)
Q Consensus 133 ~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l 191 (320)
.+.+ .+-....+.++.++.+++.|+.+.++-+. ||+......++...
T Consensus 339 ~ik~----------~~~GGite~~~i~~~A~~~g~~~~~~h~~--get~~~~~a~la~a 385 (431)
T 2fym_A 339 LIKF----------NQIGSLTETLAAIKMAKDAGYTAVISHRS--GETEDATIADLAVG 385 (431)
T ss_dssp EECG----------GGTCSHHHHHHHHHHHHHTTCEEEEECCS--SCCSCCHHHHHHHH
T ss_pred EECc----------cccCCHHHHHHHHHHHHHCCCeEEEeCCC--CCchHHHHHHHHHh
Confidence 7754 34467888899999999999987443333 35543444444443
No 348
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=61.04 E-value=17 Score=29.07 Aligned_cols=38 Identities=5% Similarity=0.063 Sum_probs=25.6
Q ss_pred HHHHHhhhc--CceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 97 EYVKDIRDM--GMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 97 ~~i~~~k~~--~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
+.++.+++. ++++.+..|. +.+.++.+.++|.|.+.++
T Consensus 148 ~~i~~l~~~~~~~~i~~~gGI-~~~~~~~~~~~Gad~vvvG 187 (211)
T 3f4w_A 148 DDLITMLKVRRKARIAVAGGI-SSQTVKDYALLGPDVVIVG 187 (211)
T ss_dssp HHHHHHHHHCSSCEEEEESSC-CTTTHHHHHTTCCSEEEEC
T ss_pred HHHHHHHHHcCCCcEEEECCC-CHHHHHHHHHcCCCEEEEC
Confidence 444555532 5667677776 4778888888888887776
No 349
>1m6j_A TIM, TPI, triosephosphate isomerase; asymmetry, monomer stability; 1.50A {Entamoeba histolytica} SCOP: c.1.1.1
Probab=60.98 E-value=74 Score=26.71 Aligned_cols=143 Identities=20% Similarity=0.153 Sum_probs=80.3
Q ss_pred CCCCCHHH-HHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHH-----
Q 020848 113 LGMLEKHQ-AIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVG----- 186 (320)
Q Consensus 113 ~g~l~~e~-l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~----- 186 (320)
.|..|-|. ...|+++|++++-++- .-++.+. +.+-+.+-+.++.+.+.|+.+ |+-.||+.++...
T Consensus 78 ~GAfTGEiS~~mL~d~G~~~ViiGH----SERR~~f-~Etd~~v~~Kv~~Al~~GL~p----I~CvGEtleere~g~t~~ 148 (261)
T 1m6j_A 78 SGAYTGEVHVGMLVDCQVPYVILGH----SERRQIF-HESNEQVAEKVKVAIDAGLKV----IACIGETEAQRIANQTEE 148 (261)
T ss_dssp SBSCTTCCBHHHHHHTTCCEEEESC----HHHHHHS-CCCHHHHHHHHHHHHHHTCEE----EEEECCCHHHHHTTCHHH
T ss_pred CCCccccCCHHHHHHcCCCEEEECc----hhhhccc-CCCHHHHHHHHHHHHHCCCEE----EEEcCCcHHHHhCCCHHH
Confidence 34444333 5677899999998875 2222222 456777888889999999864 5556888776541
Q ss_pred -----HHHHHhcCCCC-CCeeeeeeeeecC--CCCCCCCCCCCHHHHHHHHHHHHHhCCC-------ceeec-CCccccc
Q 020848 187 -----LLHTLATLPTH-PESVPINALLAVK--GTPLQDQKPVEIWEMIRMIATARIVMPK-------AMVRL-SAGRVRF 250 (320)
Q Consensus 187 -----~l~~l~~l~~~-~~~v~~~~~~p~~--gt~~~~~~~~~~~e~~~~~a~~R~~~p~-------~~i~~-~~g~~~~ 250 (320)
+-..+..+... ... .+..|-|+= ||. ...++++...+.+..|..+.. ..+++ -+|-++-
T Consensus 149 vv~~Ql~~~l~~~~~~~~~~-~vIAYEPvWAIGTG----~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~ 223 (261)
T 1m6j_A 149 VVAAQLKAINNAISKEAWKN-IILAYEPVWAIGTG----KTATPDQAQEVHQYIRKWMTENISKEVAEATRIQYGGSVNP 223 (261)
T ss_dssp HHHHHHHHHHHHSCTGGGGG-EEEEECCGGGSSSS----CCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSCEEECSCCCT
T ss_pred HHHHHHHHHHhcCCHHHcCC-EEEEECCHHHhCCC----CCCCHHHHHHHHHHHHHHHHHhhChhhcccccEEEcCCcCH
Confidence 11112333210 112 234666643 664 346788888888877754421 11232 1222221
Q ss_pred ChhHHHHHHHcCCceEeeCC
Q 020848 251 SMPEQALCFLAGANSIFTGE 270 (320)
Q Consensus 251 ~~~~~~~~~~~Gan~~~~~~ 270 (320)
.+.....-..+++.++.|.
T Consensus 224 -~N~~~l~~~~diDG~LVGg 242 (261)
T 1m6j_A 224 -ANCNELAKKADIDGFLVGG 242 (261)
T ss_dssp -TTHHHHHTSTTCCEEEESG
T ss_pred -hhHHHHhcCCCCCeeEecH
Confidence 2223444457788887775
No 350
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=60.97 E-value=69 Score=26.39 Aligned_cols=134 Identities=11% Similarity=0.139 Sum_probs=79.8
Q ss_pred HHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHH----HHH----HHh
Q 020848 121 AIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVG----LLH----TLA 192 (320)
Q Consensus 121 l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~----~l~----~l~ 192 (320)
...|+++|++++-++- .-++.+. +.+-+.+-+.++.+.+.|+.+ |+-.||+.++... +.+ .+.
T Consensus 74 ~~mL~d~G~~~ViiGH----SERR~~f-~Etd~~v~~Kv~~Al~~GL~p----I~CvGEtleere~g~~~t~~vv~~Ql~ 144 (233)
T 2jgq_A 74 SKHLEELKIHTLLIGH----SERRTLL-KESPSFLKEKFDFFKSKNFKI----VYCIGEELTTREKGFKAVKEFLSEQLE 144 (233)
T ss_dssp HHHHHHTTCCEEEECC----HHHHHTT-CCCHHHHHHHHHHHHHTTCEE----EEEECCCHHHHHHCHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCEEEeCc----hhhhccc-CCCHHHHHHHHHHHHHCCCEE----EEEcCCcHHHHhcCchhHHHHHHHHHH
Confidence 5567888999998875 1122221 456777888899999999865 5556899887654 222 223
Q ss_pred cCCCCCCeeeeeeeeecC--CCCCCCCCCCCHHHHHHHHHHHHHhCC-CceeecCCcccccChhHHHHHHHcCCceEeeC
Q 020848 193 TLPTHPESVPINALLAVK--GTPLQDQKPVEIWEMIRMIATARIVMP-KAMVRLSAGRVRFSMPEQALCFLAGANSIFTG 269 (320)
Q Consensus 193 ~l~~~~~~v~~~~~~p~~--gt~~~~~~~~~~~e~~~~~a~~R~~~p-~~~i~~~~g~~~~~~~~~~~~~~~Gan~~~~~ 269 (320)
.+...... .+..|-|+= ||. ...++++...+.+..|..+. ...|-.. |-.+- .+.....-..+++.++.|
T Consensus 145 ~l~~~~~~-~vIAYEPvWAIGTG----~~At~e~a~ev~~~IR~~l~~~vrIlYG-GSV~~-~N~~~l~~~~diDG~LVG 217 (233)
T 2jgq_A 145 NIDLNYPN-LVVAYEPIWAIGTK----KSASLEDIYLTHGFLKQILNQKTPLLYG-GSVNT-QNAKEILGIDSVDGLLIG 217 (233)
T ss_dssp TSCTTCTT-EEEEECCGGGTTC------CCCHHHHHHHHHHHHHHSCTTSCEEEE-SSCCT-TTHHHHHTSTTCCEEEES
T ss_pred hhhhhccc-eEEEEeCHHHhCCC----CCCCHHHHHHHHHHHHHHHhcCCcEEEc-CCcCh-hhHHHHhcCCCCCeeEec
Confidence 33211011 234555632 664 35688998899999999884 3333332 22221 223344556788888777
Q ss_pred C
Q 020848 270 E 270 (320)
Q Consensus 270 ~ 270 (320)
.
T Consensus 218 g 218 (233)
T 2jgq_A 218 S 218 (233)
T ss_dssp G
T ss_pred H
Confidence 5
No 351
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=60.97 E-value=79 Score=27.09 Aligned_cols=170 Identities=12% Similarity=0.075 Sum_probs=101.6
Q ss_pred CCCCCHHHHHHHHHhccCeeccCccccH-HHHhhhCC-CCCHHHHHHHHHHHHH-cCCeeeeeEEEEeCCCHHHHHHHHH
Q 020848 113 LGMLEKHQAIELKKAGLTAYNHNLDTSR-EFYSKIIT-TRSYDERLETLKHVRE-AGINVCSGGIIGLGEAEEDRVGLLH 189 (320)
Q Consensus 113 ~g~l~~e~l~~L~~aGld~v~i~let~~-~~~~~i~~-~~~~~~~l~~i~~a~~-~Gi~v~~~~i~Glget~ed~~~~l~ 189 (320)
++..+.-..+.+.++|++.+.++=-+.. ..+-.-.. .-++++.+..++...+ ..+++.+++-.|.| +.+++.+.++
T Consensus 27 ~~a~D~~sA~l~e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg-~~~~v~~~v~ 105 (298)
T 3eoo_A 27 VGAITAYAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATNLPLLVDIDTGWG-GAFNIARTIR 105 (298)
T ss_dssp EECSSHHHHHHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHCCSCEEEECTTCSS-SHHHHHHHHH
T ss_pred ecCCCHHHHHHHHHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhcCCeEEEECCCCCC-CHHHHHHHHH
Confidence 4557777888888999999888621221 11111001 2378999888887654 56678888877877 8889999999
Q ss_pred HHhcCCCCCCeeeeeeee-ecCCCCCCCCCCCCHHHHHHHHHHHHHhCC--CceeecCCc-c--cccChh--HHHHHHHc
Q 020848 190 TLATLPTHPESVPINALL-AVKGTPLQDQKPVEIWEMIRMIATARIVMP--KAMVRLSAG-R--VRFSMP--EQALCFLA 261 (320)
Q Consensus 190 ~l~~l~~~~~~v~~~~~~-p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p--~~~i~~~~g-~--~~~~~~--~~~~~~~~ 261 (320)
.+.+.| ..-|.+---. |.....+......+.++....+..++..-. +..|..-+. . .++... .......+
T Consensus 106 ~l~~aG--aagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~gldeai~Ra~ay~~A 183 (298)
T 3eoo_A 106 SFIKAG--VGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGIDAAIERAIAYVEA 183 (298)
T ss_dssp HHHHTT--CSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhC--CeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCHHHHHHHHHhhHhc
Confidence 888887 6666664322 211111233345778888888877776653 333322111 1 111111 11223568
Q ss_pred CCceEeeCCccccCCCCChhHHHHHHHHcC
Q 020848 262 GANSIFTGEKLLTTPNNDFDADQLMFKVLG 291 (320)
Q Consensus 262 Gan~~~~~~~~~~~~~~~~~~~~~~i~~~G 291 (320)
||+.++... . .+.+++.+..++..
T Consensus 184 GAD~if~~~-~-----~~~ee~~~~~~~~~ 207 (298)
T 3eoo_A 184 GADMIFPEA-M-----KTLDDYRRFKEAVK 207 (298)
T ss_dssp TCSEEEECC-C-----CSHHHHHHHHHHHC
T ss_pred CCCEEEeCC-C-----CCHHHHHHHHHHcC
Confidence 999997753 1 35666666666665
No 352
>3bh1_A UPF0371 protein DIP2346; structural genomics, unknown function, protein structure INI PSI-2; 2.51A {Corynebacterium diphtheriae nctc 13129ORGANISM_TAXID}
Probab=60.83 E-value=31 Score=31.09 Aligned_cols=96 Identities=16% Similarity=0.214 Sum_probs=61.0
Q ss_pred CCCCCHHHHHHHHHhccCeeccCcccc-HHH-HhhhCC--CCCH-HHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHH
Q 020848 113 LGMLEKHQAIELKKAGLTAYNHNLDTS-REF-YSKIIT--TRSY-DERLETLKHVREAGINVCSGGIIGLGEAEEDRVGL 187 (320)
Q Consensus 113 ~g~l~~e~l~~L~~aGld~v~i~let~-~~~-~~~i~~--~~~~-~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~ 187 (320)
+|.-.+..++.|.+. -|.+.|-+-.. .++ .++++. +-+| +++++.|..+++.|+.|+.-+|.-..+........
T Consensus 52 PGF~pdsKi~mL~~L-kD~~EIvI~I~A~DIE~nKvRgDlGItYD~dVLRLiD~fr~~gl~V~sVVITqy~~~q~~a~~F 130 (507)
T 3bh1_A 52 PGFTPDNKIAMLDRI-KDEVEILVCINAKDLERHKIRADLGISYEEDVLRLVDVFRDRGFLVEHVVLTQLENDNRLALAF 130 (507)
T ss_dssp TTCCTTHHHHHHHTT-GGGEEEEEEEEHHHHTTTCEETTTTEEHHHHHHHHHHHHHHTTCEEEEEEEESCCTTCHHHHHH
T ss_pred CCCCccHHHHHHHHh-hhcceEEEEEEhhhhhhccccccCCCChhHHHHHHHHHHHhcCCeeeeEEEEecCCCChhHHHH
Confidence 355566667777665 34444332222 222 334443 2367 58899999999999999887777444344456677
Q ss_pred HHHHhcCCCCCCeeeeeeeeecCCCCC
Q 020848 188 LHTLATLPTHPESVPINALLAVKGTPL 214 (320)
Q Consensus 188 l~~l~~l~~~~~~v~~~~~~p~~gt~~ 214 (320)
...|.++| +.++...|++|-|-
T Consensus 131 ~~rLe~~G-----Ikvy~Hy~i~GYP~ 152 (507)
T 3bh1_A 131 IERLQRLG-----IKVSRHRVIPGYPT 152 (507)
T ss_dssp HHHHHTTT-----CEEEECCCCTTTTT
T ss_pred HHHHHHCC-----CcEEEecCcCCCCC
Confidence 77888887 45666667777653
No 353
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=60.79 E-value=80 Score=27.06 Aligned_cols=101 Identities=12% Similarity=0.090 Sum_probs=58.7
Q ss_pred chhHHHHHHHHHHhhhcCce---EEEeCCC---CCHHHHHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHH
Q 020848 89 KTNFNQILEYVKDIRDMGME---VCCTLGM---LEKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHV 162 (320)
Q Consensus 89 ~~~~~~l~~~i~~~k~~~~~---i~~~~g~---l~~e~l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a 162 (320)
...++.+.++++.+-+.|+. ++-|+|. ++.++-+++.+.-++.+.-.+- +... ....+.++.++..+.+
T Consensus 31 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~p----viaG-vg~~~t~~ai~la~~A 105 (307)
T 3s5o_A 31 EVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRL----LLAG-SGCESTQATVEMTVSM 105 (307)
T ss_dssp CBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSE----EEEE-CCCSSHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCc----EEEe-cCCCCHHHHHHHHHHH
Confidence 36778888888887766665 3334453 7777766666553332221110 0000 0134778888888889
Q ss_pred HHcCCeeeeeEEEEeC---CCHHHHHHHHHHHhcC
Q 020848 163 REAGINVCSGGIIGLG---EAEEDRVGLLHTLATL 194 (320)
Q Consensus 163 ~~~Gi~v~~~~i~Glg---et~ed~~~~l~~l~~l 194 (320)
.+.|.+-..-+..-.. .+.+++.++.+.+.+-
T Consensus 106 ~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a 140 (307)
T 3s5o_A 106 AQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADL 140 (307)
T ss_dssp HHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHH
T ss_pred HHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhh
Confidence 9988873222211111 4888888888777653
No 354
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=60.75 E-value=19 Score=31.89 Aligned_cols=43 Identities=14% Similarity=0.136 Sum_probs=27.9
Q ss_pred CCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 150 RSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
......++.++.+++.|+.+.++.+. ++.=-....+.+...++
T Consensus 274 GGit~~~~i~~~A~~~g~~~~~~~~~---es~i~~aa~~hlaa~~~ 316 (371)
T 2ps2_A 274 GGLTRGRRQRDICLAAGYSVSVQETC---GSDIAFAAIVHLAQTIP 316 (371)
T ss_dssp TSHHHHHHHHHHHHHHTCEEEEECSS---CCHHHHHHHHHHHTTSC
T ss_pred CCHHHHHHHHHHHHHcCCeEEecCCC---cCHHHHHHHHHHHHhCC
Confidence 35777788888999999887555433 45444555555555553
No 355
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=60.70 E-value=33 Score=29.75 Aligned_cols=66 Identities=17% Similarity=0.201 Sum_probs=43.4
Q ss_pred HHHHHcCCCEEEEecccCCC-CCCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 66 QKAKEAGSTRFCMGAAWRDT-IGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 66 ~~~~~~g~~~i~l~~g~~~~-~ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
+.+.+.|++.|.+.+..... .|....+ +++..++ ..++++....|..+.+.+.++..+|.+.+.++
T Consensus 138 ~~a~~~GaD~i~v~g~~~GG~~G~~~~~----~ll~~i~~~~~iPviaaGGI~~~~dv~~al~~GA~gV~vG 205 (326)
T 3bo9_A 138 RMVERAGADAVIAEGMESGGHIGEVTTF----VLVNKVSRSVNIPVIAAGGIADGRGMAAAFALGAEAVQMG 205 (326)
T ss_dssp HHHHHTTCSCEEEECTTSSEECCSSCHH----HHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHHHcCCCEEEEECCCCCccCCCccHH----HHHHHHHHHcCCCEEEECCCCCHHHHHHHHHhCCCEEEec
Confidence 34556899999886521110 1222222 3444444 34788888889888999988888999998886
No 356
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=60.70 E-value=27 Score=30.87 Aligned_cols=70 Identities=19% Similarity=0.228 Sum_probs=45.4
Q ss_pred HHHHHHcCCCEEEEec---ccC-CCCCCchhH-----HHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHhccCeecc
Q 020848 65 AQKAKEAGSTRFCMGA---AWR-DTIGRKTNF-----NQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAGLTAYNH 134 (320)
Q Consensus 65 ~~~~~~~g~~~i~l~~---g~~-~~~ge~~~~-----~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i 134 (320)
++.+.+.|++.|.+.+ |++ .+. .+... ...+++++.++ ..++++....|..+.+.+..+.++|.|.|.+
T Consensus 158 a~~a~~~GaD~i~v~g~~~GGh~g~~-~~~~~~~~~~~~~~~~l~~i~~~~~iPViaaGGI~~~~~~~~~l~~GAd~V~v 236 (369)
T 3bw2_A 158 ARAVEAAGADAVIAQGVEAGGHQGTH-RDSSEDDGAGIGLLSLLAQVREAVDIPVVAAGGIMRGGQIAAVLAAGADAAQL 236 (369)
T ss_dssp HHHHHHTTCSEEEEECTTCSEECCCS-SCCGGGTTCCCCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHcCCCEEEEeCCCcCCcCCCc-ccccccccccccHHHHHHHHHHhcCceEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 3355668999998854 222 111 01000 01345566665 3578888888888999999999999999888
Q ss_pred C
Q 020848 135 N 135 (320)
Q Consensus 135 ~ 135 (320)
+
T Consensus 237 G 237 (369)
T 3bw2_A 237 G 237 (369)
T ss_dssp S
T ss_pred C
Confidence 6
No 357
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=60.66 E-value=72 Score=28.59 Aligned_cols=79 Identities=13% Similarity=0.130 Sum_probs=48.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCC--CCchhHHHHHHHHHHhhh-c--CceEEEe-CCCCCHHH----HHHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTI--GRKTNFNQILEYVKDIRD-M--GMEVCCT-LGMLEKHQ----AIELK 125 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~--ge~~~~~~l~~~i~~~k~-~--~~~i~~~-~g~l~~e~----l~~L~ 125 (320)
.++|++.+.++.+.+.|++.+.+.|. .... ..+...+.-++.++++++ . ++.+.+. |+-.+.+. ++.|.
T Consensus 124 ~~~e~~~~~a~~~~~~G~~~iKl~G~-~~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN~~~~~~~A~~~~~~L~ 202 (405)
T 3rr1_A 124 DRPADVIAGMKALQAGGFDHFKLNGC-EEMGIIDTSRAVDAAVARVAEIRSAFGNTVEFGLDFHGRVSAPMAKVLIKELE 202 (405)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEESC-CSSSCBCSHHHHHHHHHHHHHHHHTTGGGSEEEEECCSCBCHHHHHHHHHHHG
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecC-CcccccccchhHHHHHHHHHHHHHHhCCCceEEEECCCCCCHHHHHHHHHHHH
Confidence 57899999999999999999998432 1110 011235566777777774 3 3454332 44455444 45566
Q ss_pred HhccCeeccC
Q 020848 126 KAGLTAYNHN 135 (320)
Q Consensus 126 ~aGld~v~i~ 135 (320)
+.|++.+.-.
T Consensus 203 ~~~i~~iEeP 212 (405)
T 3rr1_A 203 PYRPLFIEEP 212 (405)
T ss_dssp GGCCSCEECS
T ss_pred hcCCCEEECC
Confidence 6677766533
No 358
>1ug6_A Beta-glycosidase; glucosidase, atomic resolution, riken structural genomics/PR initiative, RSGI, structural genomics, hydrolase; 0.99A {Thermus thermophilus} SCOP: c.1.8.4 PDB: 1np2_A
Probab=60.64 E-value=17 Score=33.14 Aligned_cols=57 Identities=9% Similarity=0.017 Sum_probs=42.8
Q ss_pred CHHHHHHHHHhccCeeccCccccHHHHhhhCCCCC---HHHHHHHHHHHHHcCCeeeeeEE
Q 020848 117 EKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRS---YDERLETLKHVREAGINVCSGGI 174 (320)
Q Consensus 117 ~~e~l~~L~~aGld~v~i~let~~~~~~~i~~~~~---~~~~l~~i~~a~~~Gi~v~~~~i 174 (320)
.++.++.|+++|++.+.+++ +-.++...-...-+ ++..-+.|+.+++.||.+-+++.
T Consensus 59 ~~eDi~lm~~~G~~~~R~si-~W~Ri~P~g~g~~n~~gl~~y~~~id~l~~~GI~p~vtL~ 118 (431)
T 1ug6_A 59 YEEDIALMQSLGVRAYRFSV-AWPRILPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLY 118 (431)
T ss_dssp HHHHHHHHHHHTCCEEEEEC-CHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred hHHHHHHHHHcCCCEEEccc-CHHHcccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 48899999999999999988 22666654312224 77788889999999998655543
No 359
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=60.46 E-value=37 Score=30.47 Aligned_cols=125 Identities=8% Similarity=0.002 Sum_probs=62.9
Q ss_pred CHHHHHHHHHHHHHcCCC--EEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeecc
Q 020848 57 TKDAVMQAAQKAKEAGST--RFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNH 134 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~--~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i 134 (320)
++++-++.++.+++.- . .+.+ .. + + ....++..++++.+.+.++...--+-. +.+.+++|++.- .+.+
T Consensus 195 ~~~~d~~~v~avR~~~-~~~~l~v-Da-N---~-~w~~~~A~~~~~~l~~~~i~~iEqP~~-d~~~~~~l~~~~--~iPI 264 (398)
T 4dye_A 195 DCAGDVAILRAVREAL-PGVNLRV-DP-N---A-AWSVPDSVRAGIALEELDLEYLEDPCV-GIEGMAQVKAKV--RIPL 264 (398)
T ss_dssp CHHHHHHHHHHHHHHC-TTSEEEE-EC-T---T-CSCHHHHHHHHHHHGGGCCSEEECCSS-HHHHHHHHHHHC--CSCE
T ss_pred CHHHHHHHHHHHHHhC-CCCeEEe-eC-C---C-CCCHHHHHHHHHHHhhcCCCEEcCCCC-CHHHHHHHHhhC--CCCE
Confidence 4555555565555532 2 2322 11 1 1 234566677777777666652222212 556677776641 1222
Q ss_pred C----ccccHHHHhhhC------------CCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcC
Q 020848 135 N----LDTSREFYSKII------------TTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 194 (320)
Q Consensus 135 ~----let~~~~~~~i~------------~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 194 (320)
. +.+..+..+.+. +-......++....|.+.|+.+.++.+ +++.-.....+..+..+
T Consensus 265 a~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~---~e~~i~~aa~l~laaa~ 337 (398)
T 4dye_A 265 CTNMCVVRFEDFAPAMRLNAVDVIHGDVYKWGGIAATKALAAHCETFGLGMNLHSG---GELGIATAAHLAVVSST 337 (398)
T ss_dssp EESSSCCSGGGHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECCS---CCCHHHHHHHHHHHHTC
T ss_pred EeCCcCCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEEcCC---cchHHHHHHHHHHHhcC
Confidence 1 112211111111 113577888888999999999877652 34433445555555544
No 360
>1mo0_A TIM, triosephosphate isomerase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; 1.70A {Caenorhabditis elegans} SCOP: c.1.1.1
Probab=60.42 E-value=78 Score=26.80 Aligned_cols=149 Identities=19% Similarity=0.096 Sum_probs=83.0
Q ss_pred HHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHH------HHH----H
Q 020848 121 AIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVG------LLH----T 190 (320)
Q Consensus 121 l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~------~l~----~ 190 (320)
...|+++|++++-++- .-++.+. +.+-+.+-+.++.+.+.|+.+ |+-.||+.++... ... .
T Consensus 99 ~~mLkd~G~~~ViiGH----SERR~~f-~Etde~V~~Kv~~Al~~GL~p----I~CvGEtleeReag~t~~vv~~Ql~~~ 169 (275)
T 1mo0_A 99 PAMIKDLGLEWVILGH----SERRHVF-GESDALIAEKTVHALEAGIKV----VFCIGEKLEEREAGHTKDVNFRQLQAI 169 (275)
T ss_dssp HHHHHHTTCCEEEESC----HHHHHTS-CCCHHHHHHHHHHHHHTTCEE----EEEECCCHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEeCc----hhhhccc-CCCHHHHHHHHHHHHHCCCEE----EEEcCCcHHHHhCCChHHHHHHHHHHH
Confidence 4667888999998875 1122221 457777888899999999865 5556888876541 111 1
Q ss_pred HhcCCCCCCeeeeeeeeecC--CCCCCCCCCCCHHHHHHHHHHHHHhCCC-------ceeecC-CcccccChhHHHHHHH
Q 020848 191 LATLPTHPESVPINALLAVK--GTPLQDQKPVEIWEMIRMIATARIVMPK-------AMVRLS-AGRVRFSMPEQALCFL 260 (320)
Q Consensus 191 l~~l~~~~~~v~~~~~~p~~--gt~~~~~~~~~~~e~~~~~a~~R~~~p~-------~~i~~~-~g~~~~~~~~~~~~~~ 260 (320)
+..+. .... .+..|-|+= ||. ...++++...+.+..|..+.. ..+++- +|-++- .+.....-.
T Consensus 170 l~~~~-~~~~-vvIAYEPvWAIGTG----ktAtpe~aqevh~~IR~~l~~~~~~~~a~~vrILYGGSV~~-~N~~el~~~ 242 (275)
T 1mo0_A 170 VDKGV-SWEN-IVIAYEPVWAIGTG----KTASGEQAQEVHEWIRAFLKEKVSPAVADATRIIYGGSVTA-DNAAELGKK 242 (275)
T ss_dssp HTTTC-CSTT-EEEEECCGGGTTTS----CCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSCEEEESSCCT-TTHHHHTTS
T ss_pred Hhhhh-hhcC-EEEEECCHHHhCCC----CCCCHHHHHHHHHHHHHHHHHhhChhhcCcccEEEcCCCCH-hhHHHHhcC
Confidence 22121 1112 234566643 664 346788888888877754422 112321 222221 222344445
Q ss_pred cCCceEeeCCccccCCCCChhHHHHHHHHc
Q 020848 261 AGANSIFTGEKLLTTPNNDFDADQLMFKVL 290 (320)
Q Consensus 261 ~Gan~~~~~~~~~~~~~~~~~~~~~~i~~~ 290 (320)
.+++.++.|..- ..+++-.++++..
T Consensus 243 ~diDG~LVGgAS-----Lka~~F~~Ii~~~ 267 (275)
T 1mo0_A 243 PDIDGFLVGGAS-----LKPDFVKIINARS 267 (275)
T ss_dssp TTCCEEEESGGG-----GSTHHHHHHHHHS
T ss_pred CCCCeeEechHH-----hChHHHHHHHHhh
Confidence 678888776522 2344555666543
No 361
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=60.41 E-value=77 Score=26.77 Aligned_cols=148 Identities=20% Similarity=0.207 Sum_probs=86.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhh-c-CceEEEeC------CC--CCHHHHHHH-
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-M-GMEVCCTL------GM--LEKHQAIEL- 124 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~-~-~~~i~~~~------g~--l~~e~l~~L- 124 (320)
-+.++++..++.+...|++-|-+=-. ...++...+++.+.++.+++ . ++++..|. |. .+++.+..|
T Consensus 49 ~~~~e~~~~~~~~~~~gaD~VElRvD---~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~ll 125 (276)
T 3o1n_A 49 KTITDVKSEALAYREADFDILEWRVD---HFANVTTAESVLEAAGAIREIITDKPLLFTFRSAKEGGEQALTTGQYIDLN 125 (276)
T ss_dssp SSHHHHHHHHHHHTTSCCSEEEEEGG---GCTTTTCHHHHHHHHHHHHHHCCSSCEEEECCBGGGTCSBCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhCCCCEEEEEec---cccccCcHHHHHHHHHHHHHhcCCCCEEEEEEEhhhCCCCCCCHHHHHHHH
Confidence 47899999998888788887766211 11122344678888888884 3 56755543 32 355443333
Q ss_pred ---HHhc-cCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeE-EEEeCCCHHHHHHHHHHHhcCCCCCC
Q 020848 125 ---KKAG-LTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGG-IIGLGEAEEDRVGLLHTLATLPTHPE 199 (320)
Q Consensus 125 ---~~aG-ld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~-i~Glget~ed~~~~l~~l~~l~~~~~ 199 (320)
.+.| +|.|-+-+...++ .+-+.++.+++.|.++-... -+.-..+.+++.+.+..+.++| ++
T Consensus 126 ~~~l~~g~~dyIDvEl~~~~~------------~~~~l~~~a~~~~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~G--aD 191 (276)
T 3o1n_A 126 RAAVDSGLVDMIDLELFTGDD------------EVKATVGYAHQHNVAVIMSNHDFHKTPAAEEIVQRLRKMQELG--AD 191 (276)
T ss_dssp HHHHHHTCCSEEEEEGGGCHH------------HHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTT--CS
T ss_pred HHHHhcCCCCEEEEECcCCHH------------HHHHHHHHHHhCCCEEEEEeecCCCCcCHHHHHHHHHHHHHcC--CC
Confidence 3346 6776665533222 22334556778887743222 2211235688999999999998 66
Q ss_pred eeeeeeeeecCCCCCCCCCCCCHHHHHHHHHHH
Q 020848 200 SVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 232 (320)
Q Consensus 200 ~v~~~~~~p~~gt~~~~~~~~~~~e~~~~~a~~ 232 (320)
.+.+-.. +-+.++.+++....
T Consensus 192 IvKia~~------------a~s~~Dvl~Ll~~~ 212 (276)
T 3o1n_A 192 IPKIAVM------------PQTKADVLTLLTAT 212 (276)
T ss_dssp EEEEEEC------------CSSHHHHHHHHHHH
T ss_pred EEEEEec------------CCChHHHHHHHHHH
Confidence 5555321 23466666666554
No 362
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=60.36 E-value=69 Score=26.21 Aligned_cols=173 Identities=11% Similarity=0.036 Sum_probs=90.9
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh-hcCceEEE-e----CC---C--CCHHHHH
Q 020848 54 KLMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEVCC-T----LG---M--LEKHQAI 122 (320)
Q Consensus 54 ~~~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k-~~~~~i~~-~----~g---~--l~~e~l~ 122 (320)
+..+++.+.+.++.+.+.|+..+-..+ .+.++.+| ..++++.- + .| . -+.++++
T Consensus 31 pl~~~~~~~~~A~a~~~~Ga~~i~~~~---------------~~~i~~ir~~v~~Pvig~~k~d~~~~~~~I~~~~~~i~ 95 (232)
T 3igs_A 31 PLDKPEIVAAMALAAEQAGAVAVRIEG---------------IDNLRMTRSLVSVPIIGIIKRDLDESPVRITPFLDDVD 95 (232)
T ss_dssp TTCSHHHHHHHHHHHHHTTCSEEEEES---------------HHHHHHHHTTCCSCEEEECBCCCSSCCCCBSCSHHHHH
T ss_pred CCCCcchHHHHHHHHHHCCCeEEEECC---------------HHHHHHHHHhcCCCEEEEEeecCCCcceEeCccHHHHH
Confidence 335788999999999999998775421 13355666 34666431 1 11 1 2467899
Q ss_pred HHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeee
Q 020848 123 ELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVP 202 (320)
Q Consensus 123 ~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~ 202 (320)
+++++|+|.|.+..-.. .++... .+.++.+++.|+.+..++ .+.++. +.+.+.| ++.+.
T Consensus 96 ~~~~~Gad~V~l~~~~~-------~~p~~l---~~~i~~~~~~g~~v~~~v-----~t~eea----~~a~~~G--ad~Ig 154 (232)
T 3igs_A 96 ALAQAGAAIIAVDGTAR-------QRPVAV---EALLARIHHHHLLTMADC-----SSVDDG----LACQRLG--ADIIG 154 (232)
T ss_dssp HHHHHTCSEEEEECCSS-------CCSSCH---HHHHHHHHHTTCEEEEEC-----CSHHHH----HHHHHTT--CSEEE
T ss_pred HHHHcCCCEEEECcccc-------CCHHHH---HHHHHHHHHCCCEEEEeC-----CCHHHH----HHHHhCC--CCEEE
Confidence 99999999987643110 112233 445566666676543321 355544 4455677 67775
Q ss_pred eeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccChhHHHHHHHcCCceEeeCCccc
Q 020848 203 INALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLL 273 (320)
Q Consensus 203 ~~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~~~~~~~~~~Gan~~~~~~~~~ 273 (320)
+..+-..+++. ...++.+. ++.+ +.. +..+-..+| .. .+..-...+..||+.++.|..+.
T Consensus 155 ~~~~g~t~~~~---~~~~~~~~-i~~l---~~~--~ipvIA~GG-I~-t~~d~~~~~~~GadgV~VGsal~ 214 (232)
T 3igs_A 155 TTMSGYTTPDT---PEEPDLPL-VKAL---HDA--GCRVIAEGR-YN-SPALAAEAIRYGAWAVTVGSAIT 214 (232)
T ss_dssp CTTTTSSSSSC---CSSCCHHH-HHHH---HHT--TCCEEEESC-CC-SHHHHHHHHHTTCSEEEECHHHH
T ss_pred EcCccCCCCCC---CCCCCHHH-HHHH---Hhc--CCcEEEECC-CC-CHHHHHHHHHcCCCEEEEehHhc
Confidence 42211111221 12334333 2222 222 221222222 21 23334566788999999997443
No 363
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=60.09 E-value=19 Score=31.92 Aligned_cols=128 Identities=11% Similarity=0.113 Sum_probs=63.6
Q ss_pred CCHHHHHHHHHHHHH-cCCC-EEEEecccCCCCCCchhHHHHHHHHHHhhhcCce-EEEeCCCCCHHHHHHHHHhccCee
Q 020848 56 MTKDAVMQAAQKAKE-AGST-RFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKAGLTAY 132 (320)
Q Consensus 56 ~s~eei~~~~~~~~~-~g~~-~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~-i~~~~g~l~~e~l~~L~~aGld~v 132 (320)
.++++-++.++.+++ .|-+ .+.+ .... ....++..++++.+.+.++. +.-....-+.+.+++|++.- .+
T Consensus 169 ~~~~~d~~~v~avr~~~g~~~~l~v-DaN~-----~~~~~~A~~~~~~l~~~~~~~iEeP~~~~d~~~~~~l~~~~--~i 240 (370)
T 2chr_A 169 RSPQDDLIHMEALSNSLGSKAYLRV-DVNQ-----AWDEQVASVYIPELEALGVELIEQPVGRENTQALRRLSDNN--RV 240 (370)
T ss_dssp SCHHHHHHHHHHHHHHTTTTSEEEE-ECTT-----CCCTHHHHHHHHHHHTTTCCEEECCSCSSCHHHHHHHHHHC--SS
T ss_pred CChHHHHHHHHHHHHhcCCCcEEEe-cCCC-----CCCHHHHHHHHHHHHhcCCceecCCCChhhhhhhhHHhhhc--cC
Confidence 356666666666655 3433 2322 2111 12345666666666666655 22222334566777776652 12
Q ss_pred ccC----ccccHHHHhhhCC------------CCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcC
Q 020848 133 NHN----LDTSREFYSKIIT------------TRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 194 (320)
Q Consensus 133 ~i~----let~~~~~~~i~~------------~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 194 (320)
.+. +.+..+..+.+.. -......++....|.+.|+.+.++.++ ++.=.....+.++..+
T Consensus 241 pIa~dE~~~~~~~~~~~~~~~a~d~i~~d~~~~GGit~~~~ia~~A~~~gi~~~~~~~~---~~~i~~aa~~hlaa~~ 315 (370)
T 2chr_A 241 AIMADESLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASGIASYGGTML---DSTIGTSVALQLYSTV 315 (370)
T ss_dssp EEEESSSCCSHHHHHHHHTTTCCSEECCCHHHHTSHHHHHHHHHHHHHHTCEECCCCCS---CCHHHHHHHHHHHTTS
T ss_pred CccCCccCCCHHHHHHHHHcCCCcEEEeCCcccCCHHHHHHHHHHHHHcCCeEEeCCCc---ccHHHHHHHHHHHHhC
Confidence 222 1222222222211 135677788888888899876444333 3433344455555444
No 364
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=60.06 E-value=71 Score=27.47 Aligned_cols=106 Identities=10% Similarity=0.013 Sum_probs=64.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc--hhHHHHHHHHHHhhh--cCceEEEeCCC-CCHHH---HHHHHHh
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD--MGMEVCCTLGM-LEKHQ---AIELKKA 127 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~--~~~~~l~~~i~~~k~--~~~~i~~~~g~-l~~e~---l~~L~~a 127 (320)
++.+.+.+.++.+.+.|++.+++.|.+ ||. +..++-.++++.+.+ -.+++.+..|. -+.+. .+...++
T Consensus 26 iD~~~l~~lv~~li~~Gv~Gl~v~GtT----GE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg~~~t~~ai~la~~A~~~ 101 (313)
T 3dz1_A 26 IDDVSIDRLTDFYAEVGCEGVTVLGIL----GEAPKLDAAEAEAVATRFIKRAKSMQVIVGVSAPGFAAMRRLARLSMDA 101 (313)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESTGG----GTGGGSCHHHHHHHHHHHHHHCTTSEEEEECCCSSHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEeCccC----cChhhCCHHHHHHHHHHHHHHcCCCcEEEecCCCCHHHHHHHHHHHHHc
Confidence 789999999999999999999886532 442 344555555555442 24677666665 33333 4455677
Q ss_pred ccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHH-cC--CeeeeeEE
Q 020848 128 GLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AG--INVCSGGI 174 (320)
Q Consensus 128 Gld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~-~G--i~v~~~~i 174 (320)
|+|.+.+-. |- |. .+-+..++-.+.+.+ .+ +++.+.-+
T Consensus 102 Gadavlv~~---P~-~~-----~s~~~l~~~f~~va~a~~~~lPiilYn~ 142 (313)
T 3dz1_A 102 GAAGVMIAP---PP-SL-----RTDEQITTYFRQATEAIGDDVPWVLQDY 142 (313)
T ss_dssp TCSEEEECC---CT-TC-----CSHHHHHHHHHHHHHHHCTTSCEEEEEC
T ss_pred CCCEEEECC---CC-CC-----CCHHHHHHHHHHHHHhCCCCCcEEEEeC
Confidence 999887632 11 11 245555555555443 35 77644433
No 365
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=59.98 E-value=40 Score=28.94 Aligned_cols=15 Identities=27% Similarity=0.113 Sum_probs=7.3
Q ss_pred HHHHHhccCeeccCc
Q 020848 122 IELKKAGLTAYNHNL 136 (320)
Q Consensus 122 ~~L~~aGld~v~i~l 136 (320)
++|.+.|++.+.++.
T Consensus 222 ~eL~~~G~~~v~~~~ 236 (295)
T 1xg4_A 222 DELRSAHVAMALYPL 236 (295)
T ss_dssp HHHHHTTCSEEEESS
T ss_pred HHHHHcCCCEEEECh
Confidence 444445555554443
No 366
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=59.87 E-value=55 Score=28.11 Aligned_cols=121 Identities=12% Similarity=0.100 Sum_probs=68.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc--hhHHHHHHHHHHhhh---cCceEEEeCCCC-CHHH---HHHHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGML-EKHQ---AIELKK 126 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~--~~~~~l~~~i~~~k~---~~~~i~~~~g~l-~~e~---l~~L~~ 126 (320)
++.+.+.+.++.+.+.|+..+++.|.+ ||- +..++-.++++.+.+ -.+++.+..|.. +.+. .+...+
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~GtT----GE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~ 105 (306)
T 1o5k_A 30 LDLESYERLVRYQLENGVNALIVLGTT----GESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEK 105 (306)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEESSGG----GTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccc----cchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHh
Confidence 788999999999999999999885532 332 344555555555442 246666666653 3444 444566
Q ss_pred hccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeeeEEEEe---CCCHHHHHHHH
Q 020848 127 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGGIIGL---GEAEEDRVGLL 188 (320)
Q Consensus 127 aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~-~Gi~v~~~~i~Gl---get~ed~~~~l 188 (320)
+|.|.+.+..-. |. +.+.+..++-.+.+.+ .++++-+.-+.+. .-+.+.+.++.
T Consensus 106 ~Gadavlv~~P~----y~----~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 163 (306)
T 1o5k_A 106 LGANGVLVVTPY----YN----KPTQEGLYQHYKYISERTDLGIVVYNVPGRTGVNVLPETAARIA 163 (306)
T ss_dssp HTCSEEEEECCC----SS----CCCHHHHHHHHHHHHTTCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred cCCCEEEECCCC----CC----CCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 799988764211 11 1244555555555444 3566543333222 23545444443
No 367
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=59.74 E-value=16 Score=32.68 Aligned_cols=42 Identities=17% Similarity=0.196 Sum_probs=27.7
Q ss_pred CHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 151 SYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 151 ~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
.+...++....+.+.|+.+.++.+ .++.=-....+.++..++
T Consensus 279 Git~~~~i~~~A~~~gi~~~~~~~---~es~i~~aa~~hlaaa~~ 320 (385)
T 3i6e_A 279 GLTRAQTVARIAAAHGLMAYGGDM---FEAGLAHLAGTHMIAATP 320 (385)
T ss_dssp SHHHHHHHHHHHHHTTCEEEECCC---SCCHHHHHHHHHHHHTCT
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCC---CccHHHHHHHHHHHHhCC
Confidence 577778888889999988744333 345444566666666554
No 368
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=59.71 E-value=29 Score=29.32 Aligned_cols=43 Identities=16% Similarity=0.163 Sum_probs=30.6
Q ss_pred HHHHHHHHHhhhc-CceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 93 NQILEYVKDIRDM-GMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 93 ~~l~~~i~~~k~~-~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
+.+.++++++|+. ++++.+--|.-+++.++....+|.|.+-++
T Consensus 192 ~~~~~~v~~vr~~~~~pv~vGfGI~~~e~~~~~~~~gADgvVVG 235 (267)
T 3vnd_A 192 EPIENILTQLAEFNAPPPLLGFGIAEPEQVRAAIKAGAAGAISG 235 (267)
T ss_dssp -CHHHHHHHHHTTTCCCEEECSSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 4466777777743 566777777777888887777888887776
No 369
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=59.53 E-value=42 Score=30.08 Aligned_cols=69 Identities=12% Similarity=0.149 Sum_probs=43.4
Q ss_pred HHHHHHcCCCEEEEecccCCC---------CCCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 65 AQKAKEAGSTRFCMGAAWRDT---------IGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 65 ~~~~~~~g~~~i~l~~g~~~~---------~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
++.+.+.|++.|.++++ ..+ .|.| .+..+.++.+.++..++++....|..+.+.+.++..+|.|.+.++
T Consensus 208 a~~a~~~Gad~I~vg~~-~G~~~~~~~~~~~g~p-~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala~GAd~V~iG 285 (404)
T 1eep_A 208 ALDLISVGADCLKVGIG-PGSICTTRIVAGVGVP-QITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVMIG 285 (404)
T ss_dssp HHHHHTTTCSEEEECSS-CSTTSHHHHHHCCCCC-HHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHhcCCCEEEECCC-CCcCcCccccCCCCcc-hHHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHHcCCCHHhhC
Confidence 44455678888888321 111 1222 222233333323345788889999999888888888999999885
No 370
>3ahy_A Beta-glucosidase; cellulases, glycosyl hydrolase, manganese enhancement, hydro; 1.63A {Trichoderma reesei}
Probab=59.51 E-value=17 Score=33.64 Aligned_cols=58 Identities=14% Similarity=0.131 Sum_probs=44.8
Q ss_pred CCHHHHHHHHHhccCeeccCccccHHHHhhhC--CCCC---HHHHHHHHHHHHHcCCeeeeeEE
Q 020848 116 LEKHQAIELKKAGLTAYNHNLDTSREFYSKII--TTRS---YDERLETLKHVREAGINVCSGGI 174 (320)
Q Consensus 116 l~~e~l~~L~~aGld~v~i~let~~~~~~~i~--~~~~---~~~~l~~i~~a~~~Gi~v~~~~i 174 (320)
.-++.++.|+++|++.+.+|+ +-.+++..-. ..-+ ++-.-+.|..+++.||.+-+++.
T Consensus 63 ~y~eDi~lm~~lG~~~~R~si-sWsRi~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~ 125 (473)
T 3ahy_A 63 RTAEDIALLKSLGAKSYRFSI-SWSRIIPEGGRGDAVNQAGIDHYVKFVDDLLDAGITPFITLF 125 (473)
T ss_dssp CHHHHHHHHHHHTCSEEEEEC-CHHHHSSSCSTTSCCCHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHhCCCeEEccc-cHHhhcCCCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 468999999999999999998 3367766532 2234 78888899999999998666553
No 371
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=59.26 E-value=57 Score=27.02 Aligned_cols=69 Identities=13% Similarity=0.097 Sum_probs=46.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhh-c-CceEEEeCCCCCHHHHHHHHHhccCeecc
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-M-GMEVCCTLGMLEKHQAIELKKAGLTAYNH 134 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~-~-~~~i~~~~g~l~~e~l~~L~~aGld~v~i 134 (320)
+++.+.+.++...-.+..-+++.+. |.+. ..++++++++ . ++++.+--|..+.+.++++.+ |.|.+-+
T Consensus 140 ~~~~~~~~a~~g~~~~~~~VYl~s~-----G~~~----~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~~-gAd~VIV 209 (240)
T 1viz_A 140 NMDDIVAYARVSELLQLPIFYLEYS-----GVLG----DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAE-HADVIVV 209 (240)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECT-----TSCC----CHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHHT-TCSEEEE
T ss_pred CHHHHHHHHHhCcccCCCEEEEeCC-----CccC----hHHHHHHHHHhcCCCCEEEEeccCCHHHHHHHHh-CCCEEEE
Confidence 4666665555443345556666552 2121 3455666663 4 678888899999999999999 9999888
Q ss_pred C
Q 020848 135 N 135 (320)
Q Consensus 135 ~ 135 (320)
+
T Consensus 210 G 210 (240)
T 1viz_A 210 G 210 (240)
T ss_dssp C
T ss_pred C
Confidence 6
No 372
>2o9p_A Beta-glucosidase B; family 1 glycoside hydrolase; 2.10A {Paenibacillus polymyxa} PDB: 2o9t_A* 2z1s_A* 2jie_A* 2o9r_A*
Probab=59.25 E-value=15 Score=33.81 Aligned_cols=56 Identities=13% Similarity=0.006 Sum_probs=42.9
Q ss_pred CHHHHHHHHHhccCeeccCccccHHHHhhhCCCCCH---HHHHHHHHHHHHcCCeeeeeEE
Q 020848 117 EKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSY---DERLETLKHVREAGINVCSGGI 174 (320)
Q Consensus 117 ~~e~l~~L~~aGld~v~i~let~~~~~~~i~~~~~~---~~~l~~i~~a~~~Gi~v~~~~i 174 (320)
.++.++.|+++|++.+.+++ +-.+++.. ...-+. +..-+.|+.+++.||.+-+++.
T Consensus 69 ~~eDi~lm~~~G~~~~R~si-sWsRi~P~-~g~~n~~Gl~~y~~lid~l~~~GI~p~vtL~ 127 (454)
T 2o9p_A 69 FKEDVQLMKQLGFLHYRFSV-AWPRIMPA-AGIINEEGLLFYEHLLDEIELAGLIPMLTLY 127 (454)
T ss_dssp HHHHHHHHHTTTCCEEEEEC-CHHHHCSS-TTCCCHHHHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHhcCCceEEecc-cHHhhCCC-CCCcCHHHHHHHHHHHHHHHHCCCEEEEEec
Confidence 48899999999999999998 33777766 223344 5677888999999998766653
No 373
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=59.20 E-value=66 Score=25.62 Aligned_cols=159 Identities=14% Similarity=0.117 Sum_probs=86.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeC----CC-CCHHHHHHHHHh-cc
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTL----GM-LEKHQAIELKKA-GL 129 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~----g~-l~~e~l~~L~~a-Gl 129 (320)
.+.+++.+. .+...+.+++.+|. ...+-+.++.+|+.+-.+.++. |+ -++..++.|++. +.
T Consensus 17 r~~~~l~~a----l~s~~~~ifll~g~---------i~~l~~~v~~lk~~~K~v~Vh~Dli~Gls~d~~ai~fL~~~~~p 83 (192)
T 3kts_A 17 HNQKDMEKI----LELDLTYMVMLETH---------VAQLKALVKYAQAGGKKVLLHADLVNGLKNDDYAIDFLCTEICP 83 (192)
T ss_dssp SSSHHHHHH----TTSSCCEEEECSEE---------TTTHHHHHHHHHHTTCEEEEEGGGEETCCCSHHHHHHHHHTTCC
T ss_pred cCHHHHHHH----HcCCCCEEEEecCc---------HHHHHHHHHHHHHcCCeEEEecCchhccCCcHHHHHHHHhCCCC
Confidence 344555443 33556667666542 1345555666665554443443 44 467778888863 45
Q ss_pred CeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeeeeeeec
Q 020848 130 TAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAV 209 (320)
Q Consensus 130 d~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~~~p~ 209 (320)
|.+-- .+ ...++.|++.|+.+-..+. +-+ -..+...++.+.+.. |+.+- +.|
T Consensus 84 dGIIs--------------Tk-----~~~i~~Ak~~gL~tIqR~F--liD-S~al~~~~~~i~~~~--PD~iE---iLP- 135 (192)
T 3kts_A 84 DGIIS--------------TR-----GNAIMKAKQHKMLAIQRLF--MID-SSAYNKGVALIQKVQ--PDCIE---LLP- 135 (192)
T ss_dssp SEEEE--------------SC-----HHHHHHHHHTTCEEEEEEE--CCS-HHHHHHHHHHHHHHC--CSEEE---EEC-
T ss_pred CEEEe--------------Cc-----HHHHHHHHHCCCeEEEEEE--EEE-cchHHHHHHHHhhcC--CCEEE---ECC-
Confidence 54322 11 4778999999997544422 222 234566777777766 66553 333
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccChhHHHHHHHcCCceEeeCCc
Q 020848 210 KGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEK 271 (320)
Q Consensus 210 ~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~~~~~~~~~~Gan~~~~~~~ 271 (320)
| +-+ ++.+ ..+....-+. +.+|...- ++.-..++.+||+.+.++++
T Consensus 136 -G--------i~p-~iI~---~i~~~~~~Pi--IaGGlI~~-~edv~~al~aGA~aVsTs~~ 181 (192)
T 3kts_A 136 -G--------IIP-EQVQ---KMTQKLHIPV--IAGGLIET-SEQVNQVIASGAIAVTTSNK 181 (192)
T ss_dssp -T--------TCH-HHHH---HHHHHHCCCE--EEESSCCS-HHHHHHHHTTTEEEEEECCG
T ss_pred -c--------hhH-HHHH---HHHHhcCCCE--EEECCcCC-HHHHHHHHHcCCeEEEeCCH
Confidence 4 223 2333 3333332222 23444432 33446789999999988864
No 374
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=59.15 E-value=40 Score=32.86 Aligned_cols=94 Identities=14% Similarity=0.124 Sum_probs=56.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh-hc-Cce--EEEeC--CCCCHHHHHHHHHhcc
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DM-GME--VCCTL--GMLEKHQAIELKKAGL 129 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k-~~-~~~--i~~~~--g~l~~e~l~~L~~aGl 129 (320)
.+++.+++.++.+.+.|+..|+|.. +.| -..-..+.++++.++ .. +++ ++.++ |+-....+.. .++|+
T Consensus 258 ~~~e~~~~~a~~l~~~Ga~~I~l~D----T~G-~~~P~~v~~lV~~lk~~~p~~~I~~H~Hnd~GlAvANslaA-veAGa 331 (718)
T 3bg3_A 258 YSLQYYMGLAEELVRAGTHILCIKD----MAG-LLKPTACTMLVSSLRDRFPDLPLHIHTHDTSGAGVAAMLAC-AQAGA 331 (718)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEEC----TTS-CCCHHHHHHHHHHHHHHSTTCCEEEECCCTTSCHHHHHHHH-HHTTC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcC----cCC-CcCHHHHHHHHHHHHHhCCCCeEEEEECCCccHHHHHHHHH-HHhCC
Confidence 4789999999999999999999853 222 122345566666665 33 333 44444 3333444444 47899
Q ss_pred CeeccCcccc-HHHHhhhCCCCCHHHHHHHHH
Q 020848 130 TAYNHNLDTS-REFYSKIITTRSYDERLETLK 160 (320)
Q Consensus 130 d~v~i~let~-~~~~~~i~~~~~~~~~l~~i~ 160 (320)
+.|..++.+. .. ...-+.+.++.+++
T Consensus 332 ~~VD~ti~GlGer-----tGN~~lE~vv~~L~ 358 (718)
T 3bg3_A 332 DVVDVAADSMSGM-----TSQPSMGALVACTR 358 (718)
T ss_dssp SEEEEBCGGGCST-----TSCCBHHHHHHHHT
T ss_pred CEEEecCcccccc-----cCchhHHHHHHHHH
Confidence 9998887665 31 12235555554444
No 375
>1aw2_A Triosephosphate isomerase; psychrophilic, vibrio marinus; 2.65A {Moritella marina} SCOP: c.1.1.1 PDB: 1aw1_A
Probab=58.86 E-value=80 Score=26.42 Aligned_cols=103 Identities=19% Similarity=0.172 Sum_probs=62.7
Q ss_pred HHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHH----------HHHH
Q 020848 121 AIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVG----------LLHT 190 (320)
Q Consensus 121 l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~----------~l~~ 190 (320)
...|+++|++++-++- .-++.+. +.+-+.+-+.++.+.+.|+.+ |+-.||+.++... +-..
T Consensus 82 ~~mL~d~G~~~ViiGH----SERR~~f-~Etd~~v~~Kv~~Al~~GL~p----I~CvGEtleere~g~t~~vv~~Ql~~~ 152 (256)
T 1aw2_A 82 PAMLKEFGATHIIIGH----SERREYH-AESDEFVAKKFAFLKENGLTP----VLCIGESDAQNEAGETMAVCARQLDAV 152 (256)
T ss_dssp HHHHHHHTCCEEEESC----HHHHHHS-CCCHHHHHHHHHHHHHHTCEE----EEEECCCHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECc----hhhcccc-CCCHHHHHHHHHHHHHCCCEE----EEEcCCcHHHHhcCCHHHHHHHHHHHH
Confidence 5567788999998875 1122221 456677778889999999864 5556888876321 1112
Q ss_pred HhcCCCC-CCeeeeeeeeecC--CCCCCCCCCCCHHHHHHHHHHHHHhCC
Q 020848 191 LATLPTH-PESVPINALLAVK--GTPLQDQKPVEIWEMIRMIATARIVMP 237 (320)
Q Consensus 191 l~~l~~~-~~~v~~~~~~p~~--gt~~~~~~~~~~~e~~~~~a~~R~~~p 237 (320)
+..+... ...+ +..|-|+= ||. ...++++...+.+..|..+.
T Consensus 153 l~~~~~~~~~~v-vIAYEPvWAIGTG----~~Atpe~a~evh~~IR~~l~ 197 (256)
T 1aw2_A 153 INTQGVEALEGA-IIAYEPIWAIGTG----KAATAEDAQRIHAQIRAHIA 197 (256)
T ss_dssp HHHHCGGGGTTC-EEEECCTTTTTSS----CCCCHHHHHHHHHHHHHHHH
T ss_pred HhcCCHHHcCCE-EEEECCHHHhCCC----CCCCHHHHHHHHHHHHHHHH
Confidence 2223210 1122 34676743 664 34688888888888887653
No 376
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=58.82 E-value=31 Score=31.36 Aligned_cols=82 Identities=7% Similarity=0.137 Sum_probs=40.8
Q ss_pred hHHHHHHHHHHhhhcCce-EEEeCCCCCHHHHHHHHHh--ccCeecc-CccccHHHHhh------------hCCCCCHHH
Q 020848 91 NFNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKA--GLTAYNH-NLDTSREFYSK------------IITTRSYDE 154 (320)
Q Consensus 91 ~~~~l~~~i~~~k~~~~~-i~~~~g~l~~e~l~~L~~a--Gld~v~i-~let~~~~~~~------------i~~~~~~~~ 154 (320)
..++..++++.+.+.++. +.-....-+.+.++.|++. ++..+.- ++.+..+..+. +.+-..+..
T Consensus 254 ~~~~a~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite 333 (441)
T 2hxt_A 254 DVGPAIDWMRQLAEFDIAWIEEPTSPDDVLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGAVDLIQIDAARVGGVNE 333 (441)
T ss_dssp CHHHHHHHHHTTGGGCCSCEECCSCTTCHHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTSSHHHH
T ss_pred CHHHHHHHHHHHHhcCCCeeeCCCCHHHHHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEeCcceeCCHHH
Confidence 456666777766665554 2211122345667777665 1211111 11111111111 111235777
Q ss_pred HHHHHHHHHHcCCeeeee
Q 020848 155 RLETLKHVREAGINVCSG 172 (320)
Q Consensus 155 ~l~~i~~a~~~Gi~v~~~ 172 (320)
.++....+++.|+.+..+
T Consensus 334 ~~~ia~~A~~~g~~~~~h 351 (441)
T 2hxt_A 334 NLAILLLAAKFGVRVFPH 351 (441)
T ss_dssp HHHHHHHHHHTTCEECCC
T ss_pred HHHHHHHHHHcCCeEEEe
Confidence 788888888888886544
No 377
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=58.69 E-value=22 Score=32.38 Aligned_cols=111 Identities=14% Similarity=0.143 Sum_probs=66.0
Q ss_pred CCHHHHHHHHHH-HHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcC--ceEEEeC-CCCCHHHHHHHHHhc-cC
Q 020848 56 MTKDAVMQAAQK-AKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMG--MEVCCTL-GMLEKHQAIELKKAG-LT 130 (320)
Q Consensus 56 ~s~eei~~~~~~-~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~--~~i~~~~-g~l~~e~l~~L~~aG-ld 130 (320)
+++++.++.++. +.+.++.-| ..+.. +..++.+.++-+ ..+ +.+.... -..+.+.++++.+.| +|
T Consensus 263 ~t~~eai~~~~~ll~~y~i~~I------EdPl~-~dD~eg~~~L~~---~~~~pI~ivGDel~vt~~~~~~~~i~~~a~d 332 (428)
T 3tqp_A 263 LTSEEMIDRLTEWTKKYPVISI------EDGLS-ENDWAGWKLLTE---RLENKVQLVGDDIFVTNPDILEKGIKKNIAN 332 (428)
T ss_dssp BCHHHHHHHHHHHHHHSCEEEE------ECCSC-TTCHHHHHHHHH---HHTTTSEEEESTTTTTCHHHHHHHHHTTCCS
T ss_pred cCHHHHHHHHHHHHhhcccceE------eCCCC-cccHHHHHHHHH---hcCCCcceeccccccCCHHHHHHHHHhCCCC
Confidence 689999999987 666664322 22221 122333333222 334 4443322 223688888887766 57
Q ss_pred eeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEe--CCCHHHHHHHHHH
Q 020848 131 AYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL--GEAEEDRVGLLHT 190 (320)
Q Consensus 131 ~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl--get~ed~~~~l~~ 190 (320)
.+.+.+ .+-....+.++.++.++..|+.+ ++++ |||.+.....+..
T Consensus 333 ~i~iKv----------~~iGGiTealkia~lA~~~G~~~----~v~H~sGEted~~iadLaV 380 (428)
T 3tqp_A 333 AILVKL----------NQIGTLTETLATVGLAKSNKYGV----IISHRSGETEDTTIADLAV 380 (428)
T ss_dssp EEEECH----------HHHCCHHHHHHHHHHHHHTTCEE----EEECCSBCCSCCHHHHHHH
T ss_pred EEEecc----------cccCCHHHHHHHHHHHHHcCCeE----EEeCCCCCchHHHHHHHHH
Confidence 777754 22356778899999999999875 4444 6776666554433
No 378
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=58.66 E-value=57 Score=27.75 Aligned_cols=121 Identities=12% Similarity=0.076 Sum_probs=69.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc--hhHHHHHHHHHHhhh---cCceEEEeCCCC-CHHHH---HHHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGML-EKHQA---IELKK 126 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~--~~~~~l~~~i~~~k~---~~~~i~~~~g~l-~~e~l---~~L~~ 126 (320)
++.+.+.+.++.+.+.|++.+++.|.+ ||- +..++-.++++.+.+ -.+++.+..|.. +.+.+ +...+
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~Gtt----GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~ 93 (294)
T 2ehh_A 18 VDYEALGNLIEFHVDNGTDAILVCGTT----GESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKE 93 (294)
T ss_dssp ECHHHHHHHHHHHHTTTCCEEEESSTT----TTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHh
Confidence 788999999999999999999886532 443 344555555555442 246776666653 34444 44466
Q ss_pred hccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeeeEEEEe---CCCHHHHHHHH
Q 020848 127 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGGIIGL---GEAEEDRVGLL 188 (320)
Q Consensus 127 aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~-~Gi~v~~~~i~Gl---get~ed~~~~l 188 (320)
+|+|.+.+..-. |. +.+.+...+-.+...+ .++++-+.-+.+. .-+.+.+.++.
T Consensus 94 ~Gadavlv~~P~----y~----~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 151 (294)
T 2ehh_A 94 VGADGALVVVPY----YN----KPTQRGLYEHFKTVAQEVDIPIIIYNIPSRTCVEISVDTMFKLA 151 (294)
T ss_dssp TTCSEEEEECCC----SS----CCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred cCCCEEEECCCC----CC----CCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCcCCCHHHHHHHH
Confidence 799987764211 11 1244555555555443 4666543333222 23555544443
No 379
>3ahx_A Beta-glucosidase A; cellulases, glycosyl hydrolase, manganese enhancement, hydro; HET: 7PE; 1.90A {Clostridium cellulovorans}
Probab=58.60 E-value=18 Score=33.14 Aligned_cols=56 Identities=13% Similarity=0.121 Sum_probs=43.0
Q ss_pred CHHHHHHHHHhccCeeccCccccHHHHhhhCCCCC---HHHHHHHHHHHHHcCCeeeeeE
Q 020848 117 EKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRS---YDERLETLKHVREAGINVCSGG 173 (320)
Q Consensus 117 ~~e~l~~L~~aGld~v~i~let~~~~~~~i~~~~~---~~~~l~~i~~a~~~Gi~v~~~~ 173 (320)
-++.++.|+++|++.+.+++ +-.+++..=...-+ ++..-+.|+.+++.||.+-+++
T Consensus 61 ~~eDi~lm~~~G~~~~R~si-~Wsri~P~G~g~~n~~G~~~y~~lid~l~~~GI~p~vtL 119 (453)
T 3ahx_A 61 YKEDVQLLKSLGIKSYRFSI-AWPRIFPKGFGEINQKGIQFYRDLIDELIKNDIEPAITI 119 (453)
T ss_dssp HHHHHHHHHHTTCCEEEEEC-CHHHHCTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHhCCCeEeccc-CHHHhccCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 48889999999999999998 33676665211224 7788889999999999866655
No 380
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=58.51 E-value=92 Score=27.06 Aligned_cols=69 Identities=9% Similarity=0.180 Sum_probs=39.2
Q ss_pred HHHHHHcCCCEEEEecccCCCCCCch-----hHHHHHHHHHHhhhc--CceE-EEeCCCCCHHHHHHHHHhccCeeccCc
Q 020848 65 AQKAKEAGSTRFCMGAAWRDTIGRKT-----NFNQILEYVKDIRDM--GMEV-CCTLGMLEKHQAIELKKAGLTAYNHNL 136 (320)
Q Consensus 65 ~~~~~~~g~~~i~l~~g~~~~~ge~~-----~~~~l~~~i~~~k~~--~~~i-~~~~g~l~~e~l~~L~~aGld~v~i~l 136 (320)
++...+.|++.+.+...+-.... |. ..+.+.++++.+++. ++.+ ....|. ...+..|.+.|+|.+++.-
T Consensus 199 ~~~~~~aGad~iqi~D~~~~~ls-p~~f~ef~~p~~~~i~~~i~~~~~~~~~ih~c~g~--~~~l~~l~~~g~d~~~~d~ 275 (353)
T 1j93_A 199 IRYQADSGAQAVQIFDSWATELS-PVDFEEFSLPYLKQIVDSVKLTHPNLPLILYASGS--GGLLERLPLTGVDVVSLDW 275 (353)
T ss_dssp HHHHHHTTCSEEEEECGGGGGSC-HHHHHHHTHHHHHHHHHHHHHHSTTCCEEEECSSC--TTTGGGGGGGCCSEEECCT
T ss_pred HHHHHHhCCCEEEEeCcccccCC-HHHHHHHhHHHHHHHHHHHHHhCCCCCEEEECCCh--HHHHHHHHhcCCCEEEeCC
Confidence 34445789988877543321122 22 235566666667643 5553 333232 2457778889999887653
No 381
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=58.34 E-value=68 Score=28.08 Aligned_cols=76 Identities=12% Similarity=0.024 Sum_probs=50.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc--hhHHHHHHHHHHhhh---cCceEEEeCCC-CCHHH---HHHHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGM-LEKHQ---AIELKK 126 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~--~~~~~l~~~i~~~k~---~~~~i~~~~g~-l~~e~---l~~L~~ 126 (320)
++.+.+.+.++.+.+.|+..+++.|.+ ||- +..++-.++++.+.+ -.+++.+..|. -+.+. .+...+
T Consensus 49 ID~~~l~~lv~~li~~Gv~Gl~v~GtT----GE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~ 124 (343)
T 2v9d_A 49 LDKPGTAALIDDLIKAGVDGLFFLGSG----GEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQ 124 (343)
T ss_dssp BCHHHHHHHHHHHHHTTCSCEEESSTT----TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccc----cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHh
Confidence 889999999999999999999886532 442 344555555555442 24666666664 33444 444566
Q ss_pred hccCeeccC
Q 020848 127 AGLTAYNHN 135 (320)
Q Consensus 127 aGld~v~i~ 135 (320)
+|+|.+.+-
T Consensus 125 ~Gadavlv~ 133 (343)
T 2v9d_A 125 AGADGIVVI 133 (343)
T ss_dssp HTCSEEEEE
T ss_pred cCCCEEEEC
Confidence 799988663
No 382
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=58.22 E-value=52 Score=28.14 Aligned_cols=121 Identities=12% Similarity=0.065 Sum_probs=70.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc--hhHHHHHHHHHHhhh---c-CceEEEeCCC-CCHHH---HHHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---M-GMEVCCTLGM-LEKHQ---AIELK 125 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~--~~~~~l~~~i~~~k~---~-~~~i~~~~g~-l~~e~---l~~L~ 125 (320)
++.+.+.+.++.+.+.|+..+++.|.+ ||- +..++-.++++...+ - .+++.+..|. -+.+. .+...
T Consensus 25 iD~~~l~~lv~~li~~Gv~gl~v~Gtt----GE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~ 100 (301)
T 3m5v_A 25 VDEQSYARLIKRQIENGIDAVVPVGTT----GESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAK 100 (301)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEECSSTT----TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHH
Confidence 788999999999999999999885532 442 344555555555442 2 4777766665 34444 44556
Q ss_pred HhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeeeEEE---EeCCCHHHHHHHH
Q 020848 126 KAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGGII---GLGEAEEDRVGLL 188 (320)
Q Consensus 126 ~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~-~Gi~v~~~~i~---Glget~ed~~~~l 188 (320)
++|.|.+.+-.-.+ . +.+-+..++-.+.+.+ .++++-+.-+. |..-+.+.+.++.
T Consensus 101 ~~Gadavlv~~P~y----~----~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 159 (301)
T 3m5v_A 101 EHGADGILSVAPYY----N----KPTQQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLF 159 (301)
T ss_dssp HTTCSEEEEECCCS----S----CCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HcCCCEEEEcCCCC----C----CCCHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCHHHHHHHH
Confidence 67999887643111 1 1244555555555443 46665433332 2234555554443
No 383
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=58.04 E-value=1.2e+02 Score=28.33 Aligned_cols=116 Identities=10% Similarity=0.102 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHh-hhcCceEEEeCCCCCHHHHHHHHHhccCeeccCccc
Q 020848 60 AVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDI-RDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDT 138 (320)
Q Consensus 60 ei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~-k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~let 138 (320)
.+.+.++.+.+.|++-|.+ +........+..+.+.++.+ ++.++.+.++. .++...++|.|.|.++.+.
T Consensus 26 ~l~~~ve~al~~Gv~~vQl----R~K~~~~~~~~~~a~~l~~l~~~~~v~liIND------~~dlA~~~gAdGVHLgq~d 95 (540)
T 3nl6_A 26 TLYGQVEAGLQNGVTLVQI----REKDADTKFFIEEALQIKELCHAHNVPLIIND------RIDVAMAIGADGIHVGQDD 95 (540)
T ss_dssp CHHHHHHHHHHTTCSEEEE----CCSSSCTTHHHHHHHHHHHHHHHTTCCEEECS------CSHHHHHTTCSEEEECTTS
T ss_pred hHHHHHHHHHHCCCCEEEE----ecCCCCHHHHHHHHHHHHHHHHhcCCEEEEeC------cHHHHHHcCCCEEEEChhh
Confidence 3555666667789988877 22222122233333333333 35577776764 3344556789999998755
Q ss_pred cHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEe-CCCHHHHHHHHHHHhcCCCC-CCeeeeeeeeecC
Q 020848 139 SREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL-GEAEEDRVGLLHTLATLPTH-PESVPINALLAVK 210 (320)
Q Consensus 139 ~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl-get~ed~~~~l~~l~~l~~~-~~~v~~~~~~p~~ 210 (320)
.+ . ..++..... +.++|. -.+.+++... .+.|.. ++.+.+.++.|.+
T Consensus 96 l~-----------~----~~ar~~lg~------~~iiG~S~ht~eea~~A----~~~G~~~aDYv~~Gpvf~T~ 144 (540)
T 3nl6_A 96 MP-----------I----PMIRKLVGP------DMVIGWSVGFPEEVDEL----SKMGPDMVDYIGVGTLFPTL 144 (540)
T ss_dssp SC-----------H----HHHHHHHCT------TSEEEEEECSHHHHHHH----HHTCC--CCEEEESCCSCCC
T ss_pred cC-----------H----HHHHHHhCC------CCEEEEECCCHHHHHHH----HHcCCCCCCEEEEcCCCCCC
Confidence 41 1 111222111 235555 3577765543 334311 5788887776644
No 384
>1v08_A Beta-glucosidase; glycoside hydrolase, dimboa-glucoside, inhibitor, PEST defense, family GH1, hydrolase, chloroplast, transit peptide, 3D-structure; HET: NTZ; 1.9A {Zea mays} SCOP: c.1.8.4 PDB: 1e4l_A* 1e4n_A* 1e56_A* 1e55_A* 1e1e_A 1e1f_A* 1h49_A* 1hxj_A
Probab=58.00 E-value=20 Score=33.53 Aligned_cols=57 Identities=18% Similarity=0.128 Sum_probs=44.1
Q ss_pred CHHHHHHHHHhccCeeccCccccHHHHhhhC--CCCC---HHHHHHHHHHHHHcCCeeeeeEE
Q 020848 117 EKHQAIELKKAGLTAYNHNLDTSREFYSKII--TTRS---YDERLETLKHVREAGINVCSGGI 174 (320)
Q Consensus 117 ~~e~l~~L~~aGld~v~i~let~~~~~~~i~--~~~~---~~~~l~~i~~a~~~Gi~v~~~~i 174 (320)
-++.++.|+++|++.+.+++ +-.+++..-. ..-+ ++..-+.|+.+++.||.+-+++.
T Consensus 80 ~~eDi~lm~~~G~~~~R~si-sWsRi~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~ 141 (512)
T 1v08_A 80 YKTDVRLLKEMGMDAYRFSI-SWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIF 141 (512)
T ss_dssp HHHHHHHHHHTTCSEEEEEC-CHHHHSTTSSTTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHhCCCeEeccc-CHhhhCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeC
Confidence 58899999999999999998 3367766531 2235 78888899999999999666543
No 385
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=57.89 E-value=32 Score=27.77 Aligned_cols=73 Identities=16% Similarity=0.196 Sum_probs=42.9
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
+++++ ..+...|++.+.+... .++...+.....-++.++.++ ..++++....|. +.+.+.++.++|.+.+.++
T Consensus 119 t~~~~----~~a~~~gaD~i~~~~~-f~~~~~~g~~~~~~~~l~~~~~~~~~pvia~GGI-~~~nv~~~~~~Ga~gv~vg 192 (221)
T 1yad_A 119 SLEEA----VQAEKEDADYVLFGHV-FETDCKKGLEGRGVSLLSDIKQRISIPVIAIGGM-TPDRLRDVKQAGADGIAVM 192 (221)
T ss_dssp SHHHH----HHHHHTTCSEEEEECC-C----------CHHHHHHHHHHHCCSCEEEESSC-CGGGHHHHHHTTCSEEEES
T ss_pred CHHHH----HHHHhCCCCEEEECCc-cccCCCCCCCCCCHHHHHHHHHhCCCCEEEECCC-CHHHHHHHHHcCCCEEEEh
Confidence 55554 3345578888877432 111000100011235555555 346777777776 9999999999999988876
No 386
>2vxn_A Triosephosphate isomerase; fatty acid biosynthesis, transition state analogue, glycolysis, pentose shunt, gluconeogenesis, TIM, glycosome; HET: PGH PGA; 0.82A {Leishmania mexicana} PDB: 1if2_A* 1qds_A 1n55_A* 2y61_A 2y62_A 2y63_A 1amk_A 1tpf_A 1iig_A 1ag1_O* 1iih_A 1tpd_A 1trd_A* 2v5l_A 4tim_A* 5tim_A 6tim_A*
Probab=57.89 E-value=82 Score=26.26 Aligned_cols=190 Identities=16% Similarity=0.108 Sum_probs=100.5
Q ss_pred CCHHHHHHHHHHHHHcC---CCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceE-----EEeCCCCCHHH-HHHHHH
Q 020848 56 MTKDAVMQAAQKAKEAG---STRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEV-----CCTLGMLEKHQ-AIELKK 126 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g---~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i-----~~~~g~l~~e~-l~~L~~ 126 (320)
.+.++..+.++.+...- -..+.+. + .+.+|....+.++..++.+ ....|..|-|. ...|++
T Consensus 17 ~~~~~~~~l~~~l~~~~~~~~vev~v~----P------p~~~L~~v~~~~~~~~i~vgAQn~~~~~GA~TGEiS~~mL~d 86 (251)
T 2vxn_A 17 GTTASIEKLVQVFNEHTISHDVQCVVA----P------TFVHIPLVQAKLRNPKYVISAQNAIAKSGAFTGEVSMPILKD 86 (251)
T ss_dssp CCHHHHHHHHHHHHHSCCCSCCEEEEE----C------CGGGHHHHHHHCCCTTEEEEESCCBSSCSSCTTCCBHHHHHH
T ss_pred cCHHHHHHHHHHHHhhccccCceEEEE----C------cHHHHHHHHHHhcCCCceEeecccCCCCCCCcCcCCHHHHHH
Confidence 46777777777665421 1244442 1 1223333333343222321 22334444333 567889
Q ss_pred hccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHH-----H----H-HHHhcCCC
Q 020848 127 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVG-----L----L-HTLATLPT 196 (320)
Q Consensus 127 aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~-----~----l-~~l~~l~~ 196 (320)
+|++++-++- .-++.+. +.+-+.+-+.++.+.+.|+.+ |+-.||+.++... . + ..+..+..
T Consensus 87 ~G~~~ViiGH----SERR~~f-~Etd~~v~~Kv~~Al~~GL~p----I~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~ 157 (251)
T 2vxn_A 87 IGVHWVILGH----SERRTYY-GETDEIVAQKVSEACKQGFMV----IACIGETLQQREANQTAKVVLSQTSAIAAKLTK 157 (251)
T ss_dssp TTCCEEEESC----HHHHHHS-CCCHHHHHHHHHHHHHTTCEE----EEEECCCHHHHHTTCHHHHHHHHHHHHHTTCCT
T ss_pred cCCCEEEECc----hhhhccc-CCCHHHHHHHHHHHHHCCCEE----EEEcCCcHHHHhCCCHHHHHHHHHHHHHhcCCH
Confidence 9999998875 1122221 456777888889999999865 5556888877621 1 1 11233321
Q ss_pred C-CCeeeeeeeeecC--CCCCCCCCCCCHHHHHHHHHHHHHhCCC-------ceeecC-CcccccChhHHHHHHHcCCce
Q 020848 197 H-PESVPINALLAVK--GTPLQDQKPVEIWEMIRMIATARIVMPK-------AMVRLS-AGRVRFSMPEQALCFLAGANS 265 (320)
Q Consensus 197 ~-~~~v~~~~~~p~~--gt~~~~~~~~~~~e~~~~~a~~R~~~p~-------~~i~~~-~g~~~~~~~~~~~~~~~Gan~ 265 (320)
. ... .+..|-|+= ||. ...++++...+.+..|..+.. ..+++- +|-++- .+.....-..+++.
T Consensus 158 ~~~~~-~vIAYEPvWAIGTG----~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~-~N~~~l~~~~diDG 231 (251)
T 2vxn_A 158 DAWNQ-VVLAYEPVWAIGTG----KVATPEQAQEVHLLLRKWVSENIGTDVAAKLRILYGGSVNA-ANAATLYAKPDING 231 (251)
T ss_dssp GGGGG-EEEEECCGGGSSSS----CCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCEEEEESSCCT-TTHHHHHTSTTCCE
T ss_pred HHhCC-EEEEECCHHHhCCC----CCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCcCH-hHHHHHhcCCCCCe
Confidence 0 112 234666643 664 346788888888887754422 113321 222221 22234445578888
Q ss_pred EeeCC
Q 020848 266 IFTGE 270 (320)
Q Consensus 266 ~~~~~ 270 (320)
++.|.
T Consensus 232 ~LVGg 236 (251)
T 2vxn_A 232 FLVGG 236 (251)
T ss_dssp EEESG
T ss_pred eeecH
Confidence 87775
No 387
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=57.86 E-value=25 Score=29.86 Aligned_cols=67 Identities=19% Similarity=0.268 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeCCCCCHH-----------------
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKH----------------- 119 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e----------------- 119 (320)
++++.++.+..+.+.|+..+.|-+| .++.+.|+.+.+.+++++.+.|+....
T Consensus 93 s~~~a~~na~rl~kaGa~aVklEdg-----------~e~~~~I~al~~agIpV~gHiGLtPQs~~~~ggf~v~grt~~a~ 161 (275)
T 1o66_A 93 SKEQAFAAAAELMAAGAHMVKLEGG-----------VWMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQ 161 (275)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECS-----------GGGHHHHHHHHHTTCCEEEEEESCGGGTTC-----------CHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEECCc-----------HHHHHHHHHHHHcCCCeEeeeccCceeecccCCeEEEeChHHHH
Q ss_pred ----HHHHHHHhccCeecc
Q 020848 120 ----QAIELKKAGLTAYNH 134 (320)
Q Consensus 120 ----~l~~L~~aGld~v~i 134 (320)
..+.+.++|.+.+.+
T Consensus 162 ~~i~rA~a~~eAGA~~ivl 180 (275)
T 1o66_A 162 ALLNDAKAHDDAGAAVVLM 180 (275)
T ss_dssp HHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHcCCcEEEE
No 388
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=57.77 E-value=28 Score=30.75 Aligned_cols=42 Identities=14% Similarity=0.115 Sum_probs=30.0
Q ss_pred CHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 151 SYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 151 ~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
.....++..+.+++.|+.+.++.+ .++.-.+...+.++..++
T Consensus 273 Git~~~~i~~~A~~~g~~~~~~~~---~es~i~~~a~~~laa~~~ 314 (369)
T 2p8b_A 273 GIYPAVKLAHQAEMAGIECQVGSM---VESSVASSAGFHVAFSKK 314 (369)
T ss_dssp SHHHHHHHHHHHHHTTCEEEECCS---SCCHHHHHHHHHHHTTCT
T ss_pred CHHHHHHHHHHHHHcCCcEEecCC---CccHHHHHHHHHHHHcCC
Confidence 567778888999999998754432 467666777777766553
No 389
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=57.67 E-value=75 Score=27.84 Aligned_cols=121 Identities=14% Similarity=0.104 Sum_probs=68.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc--hhHHHHHHHHHHhhhcCceEEEeCCCCC-HHH---HHHHHHhcc
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRDMGMEVCCTLGMLE-KHQ---AIELKKAGL 129 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~--~~~~~l~~~i~~~k~~~~~i~~~~g~l~-~e~---l~~L~~aGl 129 (320)
++.+.+.+.++.+.+.|+..+++.|.+ ||- +..++-.++++....-.+++.+..|..+ .+. .+...++|+
T Consensus 44 ID~~~l~~lv~~li~~Gv~Gl~v~GtT----GE~~~Ls~eEr~~vi~~~~~grvpViaGvg~~st~eai~la~~A~~~Ga 119 (344)
T 2hmc_A 44 PDFDALVRKGKELIADGMSAVVYCGSM----GDWPLLTDEQRMEGVERLVKAGIPVIVGTGAVNTASAVAHAVHAQKVGA 119 (344)
T ss_dssp BCHHHHHHHHHHHHHTTCCCEEESSGG----GTGGGSCHHHHHHHHHHHHHTTCCEEEECCCSSHHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccC----cChhhCCHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCC
Confidence 789999999999999999999885532 332 3344555555542122466666666533 444 444566799
Q ss_pred CeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHH--cCCeeeeeEEE--EeCCCHHHHHHH
Q 020848 130 TAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE--AGINVCSGGII--GLGEAEEDRVGL 187 (320)
Q Consensus 130 d~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~--~Gi~v~~~~i~--Glget~ed~~~~ 187 (320)
|.+.+..-.+ .++.+-+.+++-.+.+.+ .++++-+.-+- |..-+.+.+.++
T Consensus 120 davlv~~P~y-------~~~~s~~~l~~~f~~IA~aa~~lPiilYn~P~tg~~l~~e~~~~L 174 (344)
T 2hmc_A 120 KGLMVIPRVL-------SRGSVIAAQKAHFKAILSAAPEIPAVIYNSPYYGFATRADLFFAL 174 (344)
T ss_dssp SEEEECCCCS-------SSTTCHHHHHHHHHHHHHHSTTSCEEEEEBGGGTBCCCHHHHHHH
T ss_pred CEEEECCCcc-------CCCCCHHHHHHHHHHHHhhCCCCcEEEEecCccCCCcCHHHHHHH
Confidence 9887643221 111244555666666554 36665433332 223455555544
No 390
>4g1k_A Triosephosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel, TPIA; 2.35A {Burkholderia thailandensis}
Probab=57.54 E-value=87 Score=26.45 Aligned_cols=103 Identities=19% Similarity=0.113 Sum_probs=62.3
Q ss_pred HHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHH----------HHHH
Q 020848 121 AIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVG----------LLHT 190 (320)
Q Consensus 121 l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~----------~l~~ 190 (320)
...|+++|++++-++- .-++.+. +.+-+.+-+.++.+.+.|+.+ |+-.||+.++... +-..
T Consensus 105 a~MLkd~G~~~VIiGH----SERR~~f-gEtde~V~~K~~~Al~~GL~p----IlCVGEtleeReag~t~~vv~~Ql~~~ 175 (272)
T 4g1k_A 105 AGMVAEFGAAYAIVGH----SERRAYH-GESNETVAAKARRALAAGLTP----IVCVGETLAEREAGTTEQVVGAQLDAV 175 (272)
T ss_dssp HHHHHTTTCCEEEESC----HHHHHHS-CCCHHHHHHHHHHHHHTTCEE----EEEECCCHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECc----hhccccc-CCCHHHHHHHHHHHHHCCCeE----EEEeCCCHHHHhCCCHHHHHHHHHHHH
Confidence 5667889999998875 1122221 456777788889999999865 5556899877631 1112
Q ss_pred HhcCCC-CCCeeeeeeeeecC--CCCCCCCCCCCHHHHHHHHHHHHHhCC
Q 020848 191 LATLPT-HPESVPINALLAVK--GTPLQDQKPVEIWEMIRMIATARIVMP 237 (320)
Q Consensus 191 l~~l~~-~~~~v~~~~~~p~~--gt~~~~~~~~~~~e~~~~~a~~R~~~p 237 (320)
+..++. ....+ +..|-|+= ||. ...++++...+.+..|..+.
T Consensus 176 l~~~~~~~~~~v-VIAYEPVWAIGTG----~tAt~e~aqevh~~IR~~l~ 220 (272)
T 4g1k_A 176 LAVLSPDEAARI-VVAYEPVWAIGTG----KSATAEQAQQVHAFLRGRLA 220 (272)
T ss_dssp HTTSCHHHHTTC-EEEECCGGGSSSS----CCCCHHHHHHHHHHHHHHHH
T ss_pred HhCCCHHHcCCE-EEEECcHhhccCC----CCCCHHHHHHHHHHHHHHHH
Confidence 222210 00122 34666642 653 34678888888877776653
No 391
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=57.50 E-value=17 Score=32.63 Aligned_cols=39 Identities=18% Similarity=0.196 Sum_probs=24.7
Q ss_pred CHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHh
Q 020848 151 SYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLA 192 (320)
Q Consensus 151 ~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~ 192 (320)
.+...++....|...|+.+.++.++ ++.=-+...+.++.
T Consensus 291 Git~~~~ia~~A~~~gi~~~~~~~~---es~i~~aa~~hlaa 329 (400)
T 3mwc_A 291 GLLEAIKIYKIATDNGIKLWGGTMP---ESGLGARFLISLAS 329 (400)
T ss_dssp SHHHHHHHHHHHHHTTCEEEECCSC---CCHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHcCCEEEecCCC---CCHHHHHHHHHHHc
Confidence 5777788888899999887544433 44434444444443
No 392
>2dga_A Beta-glucosidase; alpha/beta barrel, hydrolase; 1.80A {Triticum aestivum} PDB: 3aiq_A* 3air_A* 3ais_A* 3aiu_A 3aiv_A* 3aiw_A*
Probab=57.48 E-value=19 Score=34.01 Aligned_cols=56 Identities=11% Similarity=0.084 Sum_probs=43.4
Q ss_pred CHHHHHHHHHhccCeeccCccccHHHHhhhCCCCC---HHHHHHHHHHHHHcCCeeeeeE
Q 020848 117 EKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRS---YDERLETLKHVREAGINVCSGG 173 (320)
Q Consensus 117 ~~e~l~~L~~aGld~v~i~let~~~~~~~i~~~~~---~~~~l~~i~~a~~~Gi~v~~~~ 173 (320)
-++.++.|+++|++.+.+++ +-.+++..-...-+ ++.+-+.|+.+++.||.+-+++
T Consensus 130 y~eDi~lm~~lG~~~~RfsI-sWsRI~P~g~g~~n~~Gl~~Y~~lid~l~~~GI~p~vtL 188 (565)
T 2dga_A 130 YEEDVKALKDMGMKVYRFSI-SWSRILPDGTGKVNQAGIDYYNKLINSLIDNDIVPYVTI 188 (565)
T ss_dssp HHHHHHHHHHHTCSEEEEEC-CHHHHCTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHhCCCeEEecc-cHHHhccCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 48999999999999999998 33677665322335 7888889999999999865554
No 393
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=57.45 E-value=83 Score=26.22 Aligned_cols=202 Identities=14% Similarity=0.130 Sum_probs=106.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCCCC-CCchh-------------HHHHHHHHHHhhhcCceE-EEe--CCC---C
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTI-GRKTN-------------FNQILEYVKDIRDMGMEV-CCT--LGM---L 116 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l~~g~~~~~-ge~~~-------------~~~l~~~i~~~k~~~~~i-~~~--~g~---l 116 (320)
++|.-.+.++.+.+.|++-+-|+-...++. ..|.- .+.++++++.+++. +++ ..+ |-. =
T Consensus 26 ~~~~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~-~Pivlm~Y~N~i~~~G 104 (252)
T 3tha_A 26 NLQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTK-KALVFMVYYNLIFSYG 104 (252)
T ss_dssp CHHHHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCS-SEEEEECCHHHHHHHC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcC-CCEEEEeccCHHHHhh
Confidence 678888888888889999888863221221 11322 36778888887743 453 221 100 1
Q ss_pred CHHHHHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCC
Q 020848 117 EKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPT 196 (320)
Q Consensus 117 ~~e~l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~ 196 (320)
.+..+++++++|+|.+-+. .-.+++..+..+.+++.|++. -+++... +.++..+ .+.+..
T Consensus 105 ~e~F~~~~~~aGvdG~Iip-------------DLP~eE~~~~~~~~~~~Gl~~--I~lvaP~-t~~eRi~---~ia~~a- 164 (252)
T 3tha_A 105 LEKFVKKAKSLGICALIVP-------------ELSFEESDDLIKECERYNIAL--ITLVSVT-TPKERVK---KLVKHA- 164 (252)
T ss_dssp HHHHHHHHHHTTEEEEECT-------------TCCGGGCHHHHHHHHHTTCEE--CEEEETT-SCHHHHH---HHHTTC-
T ss_pred HHHHHHHHHHcCCCEEEeC-------------CCCHHHHHHHHHHHHHcCCeE--EEEeCCC-CcHHHHH---HHHHhC-
Confidence 3678999999999998773 123334455567788889874 2333233 3333322 233333
Q ss_pred CCCeeeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccChhHHHHHHHcCCceEeeCCccccCC
Q 020848 197 HPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTP 276 (320)
Q Consensus 197 ~~~~v~~~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~~~~~~~~~~Gan~~~~~~~~~~~~ 276 (320)
. .|..++...|+.=.. . ...+++...++..|.... .++..| .++....+...+..+|+.+++|..+...-
T Consensus 165 -~---gFiY~Vs~~GvTG~~-~-~~~~~~~~~v~~vr~~~~---~Pv~vG-fGIst~e~a~~~~~~ADGVIVGSAiVk~i 234 (252)
T 3tha_A 165 -K---GFIYLLASIGITGTK-S-VEEAILQDKVKEIRSFTN---LPIFVG-FGIQNNQDVKRMRKVADGVIVGTSIVKCF 234 (252)
T ss_dssp -C---SCEEEECCSCSSSCS-H-HHHHHHHHHHHHHHTTCC---SCEEEE-SSCCSHHHHHHHTTTSSEEEECHHHHHHT
T ss_pred -C---CeEEEEecCCCCCcc-c-CCCHHHHHHHHHHHHhcC---CcEEEE-cCcCCHHHHHHHHhcCCEEEECHHHHHHH
Confidence 1 222333333322111 1 112344555666665532 222212 23333444555667899999997543211
Q ss_pred -CCChhHHHHHHHH
Q 020848 277 -NNDFDADQLMFKV 289 (320)
Q Consensus 277 -~~~~~~~~~~i~~ 289 (320)
..+.++..+.+.+
T Consensus 235 ~~~~~~~~~~~~~~ 248 (252)
T 3tha_A 235 KQGNLDIIMKDIEE 248 (252)
T ss_dssp TSSCHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHH
Confidence 1245566655554
No 394
>2e3z_A Beta-glucosidase; TIM barrel, glycoside hydrolase family 1, CLAN GH-A, structural genomics, NPPSFA; 1.50A {Phanerochaete chrysosporium} PDB: 2e40_A*
Probab=57.29 E-value=20 Score=33.05 Aligned_cols=57 Identities=16% Similarity=0.098 Sum_probs=43.9
Q ss_pred CCHHHHHHHHHhccCeeccCccccHHHHhhhC--CCCC---HHHHHHHHHHHHHcCCeeeeeE
Q 020848 116 LEKHQAIELKKAGLTAYNHNLDTSREFYSKII--TTRS---YDERLETLKHVREAGINVCSGG 173 (320)
Q Consensus 116 l~~e~l~~L~~aGld~v~i~let~~~~~~~i~--~~~~---~~~~l~~i~~a~~~Gi~v~~~~ 173 (320)
.-++.++.|+++|++.+.+|+ +-.+++..-. ..-+ ++-.-+.|+.+++.||.+-+++
T Consensus 63 ~y~eDi~lm~~~G~~~~R~si-sWsRi~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL 124 (465)
T 2e3z_A 63 RWREDVQLLKSYGVKAYRFSL-SWSRIIPKGGRSDPVNGAGIKHYRTLIEELVKEGITPFVTL 124 (465)
T ss_dssp THHHHHHHHHHTTCSEEEEEC-CHHHHSTTCSTTSCCCHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HhHHHHHHHHHhCCCceeccc-chHHhcCCCCcCCCcCHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 458999999999999999998 3377776532 2234 7778888999999999865554
No 395
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=57.08 E-value=34 Score=29.49 Aligned_cols=108 Identities=18% Similarity=0.173 Sum_probs=0.0
Q ss_pred HHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeCC-------------CCCHHHHHHHHHhccCe
Q 020848 65 AQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLG-------------MLEKHQAIELKKAGLTA 131 (320)
Q Consensus 65 ~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g-------------~l~~e~l~~L~~aGld~ 131 (320)
++.+.+.|++-+.+..-......+...++.+.++.+..++.|+++.+... ....+.++.+.+.|+|.
T Consensus 114 ve~a~~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGaD~ 193 (304)
T 1to3_A 114 AQAVKRDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGADL 193 (304)
T ss_dssp HHHHHHTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSCSE
T ss_pred HHHHHHcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCCCE
Q ss_pred eccCc--------cccHHHHhh----hCCC-------CCHHHHHHHHHHHHHcCCe-eeee
Q 020848 132 YNHNL--------DTSREFYSK----IITT-------RSYDERLETLKHVREAGIN-VCSG 172 (320)
Q Consensus 132 v~i~l--------et~~~~~~~----i~~~-------~~~~~~l~~i~~a~~~Gi~-v~~~ 172 (320)
+.+.. +...++.+. ...+ .+.++.++.++.+.+.|.. +.++
T Consensus 194 iKv~~~~~~~g~~~~~~~vv~~~~~~~~~P~Vv~aGG~~~~~~~~~~~~a~~aGa~Gv~vG 254 (304)
T 1to3_A 194 YKVEMPLYGKGARSDLLTASQRLNGHINMPWVILSSGVDEKLFPRAVRVAMEAGASGFLAG 254 (304)
T ss_dssp EEECCGGGGCSCHHHHHHHHHHHHHTCCSCEEECCTTSCTTTHHHHHHHHHHTTCCEEEES
T ss_pred EEeCCCcCCCCCHHHHHHHHHhccccCCCCeEEEecCCCHHHHHHHHHHHHHcCCeEEEEe
No 396
>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A {Escherichia coli} SCOP: c.1.1.1 PDB: 1tmh_A
Probab=57.04 E-value=86 Score=26.22 Aligned_cols=134 Identities=19% Similarity=0.148 Sum_probs=74.7
Q ss_pred HHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHH----------HHHH
Q 020848 121 AIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVG----------LLHT 190 (320)
Q Consensus 121 l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~----------~l~~ 190 (320)
...|+++|++++-++- .-++.+. +.+-+.+-+.++.+.+.|+.+ |+-.||+.++... +-..
T Consensus 80 ~~mL~d~G~~~ViiGH----SERR~~f-~Etd~~v~~Kv~~Al~~GL~p----I~CvGEtleere~g~t~~vv~~Ql~~~ 150 (255)
T 1tre_A 80 AAMLKDIGAQYIIIGH----SERRTYH-KESDELIAKKFAVLKEQGLTP----VLCIGETEAENEAGKTEEVCARQIDAV 150 (255)
T ss_dssp HHHHHHHTCCEEEESC----HHHHHHS-CCCHHHHHHHHHHHHHTTCEE----EEEECCCHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECc----ccccccc-CCCHHHHHHHHHHHHHCCCEE----EEEcCCcHHHHhcCCHHHHHHHHHHHH
Confidence 4567788999998875 1122221 456777788889999999865 5556888876321 1112
Q ss_pred HhcCCCC-CCeeeeeeeeecC--CCCCCCCCCCCHHHHHHHHHHHHHhCCC------ceeec-CCcccccChhHHH-HHH
Q 020848 191 LATLPTH-PESVPINALLAVK--GTPLQDQKPVEIWEMIRMIATARIVMPK------AMVRL-SAGRVRFSMPEQA-LCF 259 (320)
Q Consensus 191 l~~l~~~-~~~v~~~~~~p~~--gt~~~~~~~~~~~e~~~~~a~~R~~~p~------~~i~~-~~g~~~~~~~~~~-~~~ 259 (320)
+..+... ...+ +..|-|+= ||. ...++++...+.+..|..+.. ..+++ -+|-+ .+.... ..-
T Consensus 151 l~~~~~~~~~~v-vIAYEPvWAIGTG----~~Atpe~a~evh~~IR~~l~~~~~~~a~~vrIlYGGSV--~~~N~~~l~~ 223 (255)
T 1tre_A 151 LKTQGAAAFEGA-VIAYEPVWAIGTG----KSATPAQAQAVHKFIRDHIAKVDANIAEQVIIQYGGSV--NASNAAELFA 223 (255)
T ss_dssp HHHHCGGGGTTC-EEEECCGGGSSSS----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECSCC--CTTTHHHHHT
T ss_pred HhcCCHHHcCcE-EEEECCHHHhCCC----CCCCHHHHHHHHHHHHHHHHhcChhhcCcccEEEcCCC--CHHHHHHHHc
Confidence 2223210 1122 34666643 664 346788888888877776432 11232 12222 222222 222
Q ss_pred HcCCceEeeCC
Q 020848 260 LAGANSIFTGE 270 (320)
Q Consensus 260 ~~Gan~~~~~~ 270 (320)
..+++.++.|.
T Consensus 224 ~~diDG~LVGg 234 (255)
T 1tre_A 224 QPDIDGALVGG 234 (255)
T ss_dssp STTCCEEEESG
T ss_pred CCCCCeeEecH
Confidence 36788887765
No 397
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=57.00 E-value=78 Score=25.76 Aligned_cols=109 Identities=11% Similarity=0.100 Sum_probs=69.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh-hc-CceEEEeCCCCCHHHHHHHHHhccCeec
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DM-GMEVCCTLGMLEKHQAIELKKAGLTAYN 133 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k-~~-~~~i~~~~g~l~~e~l~~L~~aGld~v~ 133 (320)
.++++.++.++.+.+.|++-+-+.- .. +.. .+.++.++ +. ++.+-... .++.+.++...++|.|.+.
T Consensus 26 ~~~~~~~~~~~al~~gGv~~iel~~--k~----~~~----~~~i~~l~~~~~~l~vgaGt-vl~~d~~~~A~~aGAd~v~ 94 (224)
T 1vhc_A 26 DNADDILPLADTLAKNGLSVAEITF--RS----EAA----ADAIRLLRANRPDFLIAAGT-VLTAEQVVLAKSSGADFVV 94 (224)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEET--TS----TTH----HHHHHHHHHHCTTCEEEEES-CCSHHHHHHHHHHTCSEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEec--cC----chH----HHHHHHHHHhCcCcEEeeCc-EeeHHHHHHHHHCCCCEEE
Confidence 5678888999999999999887752 11 112 23445444 22 23332332 4688999999999999986
Q ss_pred cCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeee
Q 020848 134 HNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPI 203 (320)
Q Consensus 134 i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~ 203 (320)
.+. + + .+.++.+++.|... ++|. .|.+++.. +.+.| .+.+.+
T Consensus 95 ~p~-~------------d----~~v~~~ar~~g~~~----i~Gv-~t~~e~~~----A~~~G--ad~vk~ 136 (224)
T 1vhc_A 95 TPG-L------------N----PKIVKLCQDLNFPI----TPGV-NNPMAIEI----ALEMG--ISAVKF 136 (224)
T ss_dssp CSS-C------------C----HHHHHHHHHTTCCE----ECEE-CSHHHHHH----HHHTT--CCEEEE
T ss_pred ECC-C------------C----HHHHHHHHHhCCCE----Eecc-CCHHHHHH----HHHCC--CCEEEE
Confidence 542 1 1 34466777777765 3353 36666544 34567 777877
No 398
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=57.00 E-value=1.1e+02 Score=27.43 Aligned_cols=78 Identities=12% Similarity=0.157 Sum_probs=45.6
Q ss_pred CceEEEeCCCCCHHHHHHHHHhc-cCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHH
Q 020848 106 GMEVCCTLGMLEKHQAIELKKAG-LTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDR 184 (320)
Q Consensus 106 ~~~i~~~~g~l~~e~l~~L~~aG-ld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~ 184 (320)
++++...-...+.+.++.+.+.| +|.+.+.+ .+-......++.++.|++.|+.+.++.+. +|+.-.+
T Consensus 301 ~ipIa~dE~~~~~~~~~~~i~~~a~d~i~ik~----------~~~GGitea~~i~~~A~~~gi~~~~~~~~--~et~i~~ 368 (413)
T 1kko_A 301 GVKIVADEWCNTYQDIVDFTDAGSCHMVQIKT----------PDLGGIHNIVDAVLYCNKHGMEAYQGGTC--NETEISA 368 (413)
T ss_dssp CCEEEECTTCCSHHHHHHHHHTTCCSEEEECG----------GGGSSTHHHHHHHHHHHHHTCEEEECCCT--TSCHHHH
T ss_pred CCcEEcCCCCCCHHHHHHHHHhCCCCEEEeCc----------cccCCHHHHHHHHHHHHHcCCeEEecCCC--CCCHHHH
Confidence 34444433334555555555444 44454433 12245677789999999999987544321 4777666
Q ss_pred HHHHHHHhcCC
Q 020848 185 VGLLHTLATLP 195 (320)
Q Consensus 185 ~~~l~~l~~l~ 195 (320)
...+.++..++
T Consensus 369 aa~~hlaaa~~ 379 (413)
T 1kko_A 369 RTCVHVALAAR 379 (413)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHcCC
Confidence 66666666554
No 399
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=56.93 E-value=18 Score=32.36 Aligned_cols=25 Identities=20% Similarity=0.220 Sum_probs=19.0
Q ss_pred CCHHHHHHHHHHHHHcCCeeeeeEE
Q 020848 150 RSYDERLETLKHVREAGINVCSGGI 174 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~v~~~~i 174 (320)
......++.++.|++.|+.+.++.+
T Consensus 287 GGit~~~~ia~~A~~~gi~~~~~~~ 311 (393)
T 1wuf_A 287 GGMSSALKIAEYCALNEILVWCGGM 311 (393)
T ss_dssp TSHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCHHHHHHHHHHHHHcCCeEEecCC
Confidence 4677888889999999998754433
No 400
>1e4i_A Beta-glucosidase; hydrolase, family 1 glycosyl hydrolase, covalent enzyme-GLYC intermediate, alpha/beta barrel; HET: G2F NFG; 2.00A {Bacillus polymyxa} SCOP: c.1.8.4 PDB: 1tr1_A 1bgg_A* 1bga_A 1uyq_A*
Probab=56.90 E-value=21 Score=32.63 Aligned_cols=57 Identities=11% Similarity=0.125 Sum_probs=43.4
Q ss_pred CHHHHHHHHHhccCeeccCccccHHHHhhhCCCCC---HHHHHHHHHHHHHcCCeeeeeEE
Q 020848 117 EKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRS---YDERLETLKHVREAGINVCSGGI 174 (320)
Q Consensus 117 ~~e~l~~L~~aGld~v~i~let~~~~~~~i~~~~~---~~~~l~~i~~a~~~Gi~v~~~~i 174 (320)
-++.++.|+++|++.+.+|+ +-.+++..=...-+ ++..-+.|+.+++.||.+-+++.
T Consensus 60 y~eDi~lm~~~G~~~~R~si-~W~Ri~P~G~g~~n~~Gl~~y~~lid~l~~~GI~p~vtL~ 119 (447)
T 1e4i_A 60 YEEDIRLMKELGIRTYRFSV-SWPRIFPNGDGEVNQKGLDYYHRVVDLLNDNGIEPFCTLY 119 (447)
T ss_dssp HHHHHHHHHHHTCSEEEEEC-CHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cHHHHHHHHHcCCCeEEecC-cHHHhccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 48899999999999999998 32677665212234 77778889999999998666553
No 401
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=56.84 E-value=11 Score=33.40 Aligned_cols=42 Identities=19% Similarity=0.197 Sum_probs=29.1
Q ss_pred CHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 151 SYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 151 ~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
.....++....+.+.|+.+.++.++ ++.=.+...+.++..++
T Consensus 272 Git~~~~i~~~a~~~gi~~~~~~~~---es~i~~aa~~hlaaa~p 313 (356)
T 3ro6_B 272 GLAPARRIATIAETAGIDLMWGCMD---ESRISIAAALHAALACP 313 (356)
T ss_dssp SHHHHHHHHHHHHHHTCEEEECCCS---CCHHHHHHHHHHHHTCT
T ss_pred CHHHHHHHHHHHHHcCCEEEecCCc---ccHHHHHHHHHHHhcCC
Confidence 5777888888999999987655443 55545566666666553
No 402
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=56.81 E-value=46 Score=27.85 Aligned_cols=200 Identities=11% Similarity=-0.074 Sum_probs=0.0
Q ss_pred HHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHhccCeeccCcccc-
Q 020848 62 MQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTS- 139 (320)
Q Consensus 62 ~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~let~- 139 (320)
++.++.+.+.|++.+++..=+. .-.+.++.+. +..+++.+-.|..+. .++++. +|++.|.++-...
T Consensus 41 ~~~A~~~~~~Ga~~l~vvDL~~----------~n~~~i~~i~~~~~~pv~vgGGir~~-~~~~~l-~Ga~~Viigs~a~~ 108 (260)
T 2agk_A 41 SYYAKLYKDRDVQGCHVIKLGP----------NNDDAAREALQESPQFLQVGGGINDT-NCLEWL-KWASKVIVTSWLFT 108 (260)
T ss_dssp HHHHHHHHHTTCTTCEEEEESS----------SCHHHHHHHHHHSTTTSEEESSCCTT-THHHHT-TTCSCEEECGGGBC
T ss_pred HHHHHHHHHcCCCEEEEEeCCC----------CCHHHHHHHHhcCCceEEEeCCCCHH-HHHHHh-cCCCEEEECcHHHh
Q ss_pred HHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeee---------EEEEeCCCHHHHHHHH-HHHhcCCCCCCeeeeeeeeec
Q 020848 140 REFYSKIITTRSYDERLETLKHVREAGINVCSG---------GIIGLGEAEEDRVGLL-HTLATLPTHPESVPINALLAV 209 (320)
Q Consensus 140 ~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~---------~i~Glget~ed~~~~l-~~l~~l~~~~~~v~~~~~~p~ 209 (320)
++ ....++.+.+.++...+..+-+.++ .+...|.....-.+.+ ++++.+. .. ...+.-.
T Consensus 109 ~~------g~~~p~~~~~~~~~~g~~~ivv~iD~k~~~~~g~~V~~~gw~~~t~~~~~~e~a~~~~----~~-a~~il~t 177 (260)
T 2agk_A 109 KE------GHFQLKRLERLTELCGKDRIVVDLSCRKTQDGRWIVAMNKWQTLTDLELNADTFRELR----KY-TNEFLIH 177 (260)
T ss_dssp TT------CCBCHHHHHHHHHHHCGGGEEEEEEEEEEETTEEEEEETTTTEEEEEEESHHHHHHHT----TT-CSEEEEE
T ss_pred hc------CCCCHHHHHHHHHHhCcCcEEEEEEeeecCCCceEEEEcCCccccCccHHHHHHHHHH----Hh-cCEEEEE
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHH----HHhCCCceeecCCcccccChhHHHHHHHc--CCceEeeCCcc-ccCCC-CChh
Q 020848 210 KGTPLQDQKPVEIWEMIRMIATA----RIVMPKAMVRLSAGRVRFSMPEQALCFLA--GANSIFTGEKL-LTTPN-NDFD 281 (320)
Q Consensus 210 ~gt~~~~~~~~~~~e~~~~~a~~----R~~~p~~~i~~~~g~~~~~~~~~~~~~~~--Gan~~~~~~~~-~~~~~-~~~~ 281 (320)
.-+.-.....++.+.+.++.+.. . ..-+..|-..-..+. ...+.. |++.++.|..+ +-.+. .+..
T Consensus 178 ~i~~dG~~~G~d~eli~~l~~~~~~~~~------iPVIasGGi~s~ed~-~~l~~~~~G~~gvivg~al~l~~g~~~~~~ 250 (260)
T 2agk_A 178 AADVEGLCGGIDELLVSKLFEWTKDYDD------LKIVYAGGAKSVDDL-KLVDELSHGKVDLTFGSSLDIFGGNLVKFE 250 (260)
T ss_dssp C-------CCCCHHHHHHHHHHHTTCSS------CEEEEESCCCCTHHH-HHHHHHHTTCEEEECCTTBGGGTCSSBCHH
T ss_pred eeccccCcCCCCHHHHHHHHHhhcccCC------ceEEEeCCCCCHHHH-HHHHHhcCCCCEEEeeCCHHHcCCCCCCHH
Q ss_pred HHHHHHHHcC
Q 020848 282 ADQLMFKVLG 291 (320)
Q Consensus 282 ~~~~~i~~~G 291 (320)
+.++..++.|
T Consensus 251 ~~~~~~~~~~ 260 (260)
T 2agk_A 251 DCCRWNEKQG 260 (260)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhcC
No 403
>1v02_A Dhurrinase, dhurrinase-1; beta-glucosidase, dhurrin hydrolysis, PEST defense, family GH1, hydrolase; 1.9A {Sorghum bicolor} SCOP: c.1.8.4 PDB: 1v02_E 1v03_A*
Probab=56.80 E-value=21 Score=33.77 Aligned_cols=56 Identities=16% Similarity=0.109 Sum_probs=43.7
Q ss_pred CHHHHHHHHHhccCeeccCccccHHHHhhhC--CCCC---HHHHHHHHHHHHHcCCeeeeeE
Q 020848 117 EKHQAIELKKAGLTAYNHNLDTSREFYSKII--TTRS---YDERLETLKHVREAGINVCSGG 173 (320)
Q Consensus 117 ~~e~l~~L~~aGld~v~i~let~~~~~~~i~--~~~~---~~~~l~~i~~a~~~Gi~v~~~~ 173 (320)
-++.++.|+++|++.+.+++ +-.+++..-. ..-+ ++.+-+.|+.+++.||.+-+++
T Consensus 132 y~eDi~lm~~lG~~~~R~si-sWsRi~P~g~~~g~~n~~G~~~Y~~lid~l~~~GI~p~vtL 192 (565)
T 1v02_A 132 YAEDVRLLKEMGMDAYRFSI-SWPRILPKGTLAGGINEKRVEYYNKLIDLLLENGIEPYITI 192 (565)
T ss_dssp HHHHHHHHHHTTCSEEEEEC-CHHHHSTTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHhCCCeEEccc-CHHHhCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 48999999999999999998 3377776532 2235 7888889999999999865553
No 404
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=56.61 E-value=80 Score=26.76 Aligned_cols=74 Identities=11% Similarity=0.092 Sum_probs=50.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc--hhHHHHHHHHHHhhhc--CceEEEeCCC-CCHHHH---HHHHHh
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRDM--GMEVCCTLGM-LEKHQA---IELKKA 127 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~--~~~~~l~~~i~~~k~~--~~~i~~~~g~-l~~e~l---~~L~~a 127 (320)
++.+.+.+.++.+.+.|++.+++.|.+ ||- +..++-.++++.+.+. + +.+..|. -+.+.+ +...++
T Consensus 17 iD~~~l~~lv~~li~~Gv~gl~v~GtT----GE~~~Ls~eEr~~v~~~~~~~~~g--ViaGvg~~~t~~ai~la~~A~~~ 90 (288)
T 2nuw_A 17 VNVDALKTHAKNLLEKGIDAIFVNGTT----GLGPALSKDEKRQNLNALYDVTHK--LIFQVGSLNLNDVMELVKFSNEM 90 (288)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEETSTT----TTGGGSCHHHHHHHHHHHTTTCSC--EEEECCCSCHHHHHHHHHHHHTS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHhCC--eEEeeCCCCHHHHHHHHHHHHhc
Confidence 789999999999999999999886532 443 4557777777776642 4 5555555 334444 444556
Q ss_pred ccCeeccC
Q 020848 128 GLTAYNHN 135 (320)
Q Consensus 128 Gld~v~i~ 135 (320)
|.|.+.+-
T Consensus 91 Gadavlv~ 98 (288)
T 2nuw_A 91 DILGVSSH 98 (288)
T ss_dssp CCSEEEEC
T ss_pred CCCEEEEc
Confidence 88887664
No 405
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=56.56 E-value=51 Score=28.18 Aligned_cols=105 Identities=14% Similarity=0.077 Sum_probs=62.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc--hhHHHHHHHHHHhhh---cCceEEEeCCCC-CHHH---HHHHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGML-EKHQ---AIELKK 126 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~--~~~~~l~~~i~~~k~---~~~~i~~~~g~l-~~e~---l~~L~~ 126 (320)
++.+.+.+.++.+.+.|+..+++.|.+ ||- +..++-.++++.+.+ -.+++.+..|.. +.+. .+...+
T Consensus 18 iD~~~l~~lv~~li~~Gv~gi~v~Gtt----GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~ 93 (297)
T 2rfg_A 18 VDEKALAGLVDWQIKHGAHGLVPVGTT----GESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQ 93 (297)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEECSSGG----GTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----cchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHh
Confidence 788999999999999999999875432 332 344555555555442 236666665653 3444 445566
Q ss_pred hccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeee
Q 020848 127 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSG 172 (320)
Q Consensus 127 aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~-~Gi~v~~~ 172 (320)
+|.|.+.+..-. |. +.+-+..++-.+.+.+ .++++-+.
T Consensus 94 ~Gadavlv~~P~----y~----~~s~~~l~~~f~~va~a~~lPiilY 132 (297)
T 2rfg_A 94 AGADAVLCVAGY----YN----RPSQEGLYQHFKMVHDAIDIPIIVY 132 (297)
T ss_dssp HTCSEEEECCCT----TT----CCCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred cCCCEEEEcCCC----CC----CCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 799988764321 11 1244555555555443 46665433
No 406
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=56.56 E-value=53 Score=30.26 Aligned_cols=75 Identities=13% Similarity=0.180 Sum_probs=48.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCC--------CCCCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHh
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRD--------TIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKA 127 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~--------~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~a 127 (320)
.+.+++ +.+.+.|++.|.+++++.. ..+.| ....+.++.+.++..++++....|..+.+.+.+...+
T Consensus 287 ~t~e~a----~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p-~~~~l~~v~~~~~~~~ipvia~GGI~~~~di~kala~ 361 (494)
T 1vrd_A 287 ATPEGT----EALIKAGADAVKVGVGPGSICTTRVVAGVGVP-QLTAVMECSEVARKYDVPIIADGGIRYSGDIVKALAA 361 (494)
T ss_dssp CSHHHH----HHHHHTTCSEEEECSSCSTTCHHHHHHCCCCC-HHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHT
T ss_pred CCHHHH----HHHHHcCCCEEEEcCCCCccccccccCCCCcc-HHHHHHHHHHHHhhcCCCEEEECCcCCHHHHHHHHHc
Confidence 455554 4455689998888432110 00112 2333444444444557889899999999999999999
Q ss_pred ccCeeccC
Q 020848 128 GLTAYNHN 135 (320)
Q Consensus 128 Gld~v~i~ 135 (320)
|.|.+.++
T Consensus 362 GAd~V~iG 369 (494)
T 1vrd_A 362 GAESVMVG 369 (494)
T ss_dssp TCSEEEES
T ss_pred CCCEEEEC
Confidence 99999886
No 407
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A*
Probab=56.41 E-value=29 Score=31.37 Aligned_cols=82 Identities=20% Similarity=0.312 Sum_probs=54.2
Q ss_pred CCHHHHHHHHHHH-----HHcCCCEEEEecccCCC----CCC----chhHH-HHHHHHHHhhhcCce--EEEeCCC----
Q 020848 56 MTKDAVMQAAQKA-----KEAGSTRFCMGAAWRDT----IGR----KTNFN-QILEYVKDIRDMGME--VCCTLGM---- 115 (320)
Q Consensus 56 ~s~eei~~~~~~~-----~~~g~~~i~l~~g~~~~----~ge----~~~~~-~l~~~i~~~k~~~~~--i~~~~g~---- 115 (320)
.+.+.+++.++.+ .+.|++.|.|=.|+... .|. +..++ .+-.+++.+++.|++ +....|.
T Consensus 26 ~~e~~i~~~ad~~~~~gl~~~G~~~~~iDdgW~~~~~d~~G~~~~~~~kFP~Gl~~l~~~i~~~Glk~Giw~~~g~~~c~ 105 (417)
T 1szn_A 26 IDESKFLSAAELIVSSGLLDAGYNYVNIDDCWSMKDGRVDGHIAPNATRFPDGIDGLAKKVHALGLKLGIYSTAGTATCA 105 (417)
T ss_dssp CCHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCTTCCBTTBCCBCTTTCTTHHHHHHHHHHHTTCEEEEEEESSSBCTT
T ss_pred CCHHHHHHHHHHHHHcCchhhCCCEEEECCCccCCCCCCCCCEEECcccCCcCHHHHHHHHHHcCCEEEEEeCCCCchhc
Confidence 6789999999988 77889888885554321 121 22233 377788888877776 3343332
Q ss_pred -------CCHHHHHHHHHhccCeeccCcc
Q 020848 116 -------LEKHQAIELKKAGLTAYNHNLD 137 (320)
Q Consensus 116 -------l~~e~l~~L~~aGld~v~i~le 137 (320)
......+.+++.|+|.|-+..-
T Consensus 106 ~~Pgs~~~~~~d~~~~~~wGvdylK~D~~ 134 (417)
T 1szn_A 106 GYPASLGYEDVDAADFADWGVDYLKYDNC 134 (417)
T ss_dssp SCBCCTTCHHHHHHHHHHTTCCEEEEECC
T ss_pred cCcchHhHHHHHHHHHHHcCCCEEEECCC
Confidence 2244577788899998877644
No 408
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=56.37 E-value=20 Score=30.01 Aligned_cols=66 Identities=12% Similarity=0.192 Sum_probs=37.3
Q ss_pred HHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 64 AAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 64 ~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
.++.+.+.|+++|+= +|+..+- ....+.|.++++... .++++.-.| ++.+.+..|.+.|++.+..|
T Consensus 133 ale~L~~lG~~rILT-SG~~~~a--~~g~~~L~~Lv~~a~--~i~Im~GgG-v~~~Ni~~l~~tGv~e~H~S 198 (256)
T 1twd_A 133 TLNNLAELGIARVLT-SGQKSDA--LQGLSKIMELIAHRD--APIIMAGAG-VRAENLHHFLDAGVLEVHSS 198 (256)
T ss_dssp HHHHHHHHTCCEEEE-CTTSSST--TTTHHHHHHHHTSSS--CCEEEEESS-CCTTTHHHHHHHTCSEEEEC
T ss_pred HHHHHHHcCCCEEEC-CCCCCCH--HHHHHHHHHHHHhhC--CcEEEecCC-cCHHHHHHHHHcCCCeEeEC
Confidence 344555668888863 3332221 234455555554322 455555545 55566666667888888876
No 409
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=56.34 E-value=43 Score=29.08 Aligned_cols=67 Identities=16% Similarity=0.214 Sum_probs=44.9
Q ss_pred HHHHHHcCCCEEEEecccCC-CCCCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 65 AQKAKEAGSTRFCMGAAWRD-TIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 65 ~~~~~~~g~~~i~l~~g~~~-~~ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
++.+.+.|++.+.+.|.... ..|.... +++++.++ ..++++....|..+.+.+..+..+|.|.|.++
T Consensus 123 a~~~~~~GaD~i~v~g~~~GG~~g~~~~----~~ll~~i~~~~~iPViaaGGI~~~~~~~~al~~GAdgV~vG 191 (332)
T 2z6i_A 123 AKRMEKIGADAVIAEGMEAGGHIGKLTT----MTLVRQVATAISIPVIAAGGIADGEGAAAGFMLGAEAVQVG 191 (332)
T ss_dssp HHHHHHTTCSCEEEECTTSSEECCSSCH----HHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHcCCCEEEEECCCCCCCCCCccH----HHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEec
Confidence 44556789999988653110 0121222 24555555 34788888888888999998888999998886
No 410
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=56.34 E-value=32 Score=29.23 Aligned_cols=67 Identities=19% Similarity=0.238 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeCCCC--------------------
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGML-------------------- 116 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l-------------------- 116 (320)
+++++++.+..+.+.|+..+.|-++ ....+.|+.+.+.|++++.+.|+.
T Consensus 104 s~~~a~~~a~rl~kaGa~aVklEdg-----------~~~~~~i~~l~~~GIpv~gHlgltPq~~~~~gg~~vqgrt~~~a 172 (275)
T 3vav_A 104 TPADAFASAVKLMRAGAQMVKFEGG-----------EWLAETVRFLVERAVPVCAHVGLTPQSVHAFGGFKVQGKTEAGA 172 (275)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECC-----------GGGHHHHHHHHHTTCCEEEEEESCGGGHHHHC---CCCCSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCc-----------hhHHHHHHHHHHCCCCEEEecCCCceEEeccCCeEEEcCCHHHH
Q ss_pred --CHHHHHHHHHhccCeecc
Q 020848 117 --EKHQAIELKKAGLTAYNH 134 (320)
Q Consensus 117 --~~e~l~~L~~aGld~v~i 134 (320)
.-+.++.+.++|.+.+.+
T Consensus 173 ~~~i~rA~a~~eAGA~~ivl 192 (275)
T 3vav_A 173 AQLLRDARAVEEAGAQLIVL 192 (275)
T ss_dssp HHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEe
No 411
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=55.90 E-value=74 Score=25.13 Aligned_cols=63 Identities=13% Similarity=0.121 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh----hcCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 60 AVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR----DMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 60 ei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k----~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
++.+.++.+.+.|++.+.+.- +. . ....+.+.++.++ ..++.+.++ +.++.+.++|+|.+.++
T Consensus 27 ~~~~~~~~~~~~G~~~i~l~~---~~-~---~~~~~~~~~~~l~~~~~~~~v~v~v~------~~~~~a~~~gad~v~l~ 93 (215)
T 1xi3_A 27 PEVESVREALEGGATAIQMRI---KN-A---PTREMYEIGKTLRQLTREYDALFFVD------DRVDVALAVDADGVQLG 93 (215)
T ss_dssp CHHHHHHHHHHTTCSEEEECC---CS-C---CHHHHHHHHHHHHHHHHHTTCEEEEE------SCHHHHHHHTCSEEEEC
T ss_pred hHHHHHHHHHHCCCCEEEECC---CC-C---CHHHHHHHHHHHHHHHHHcCCeEEEc------ChHHHHHHcCCCEEEEC
Confidence 445556667778999887752 11 1 2233344444333 346665554 45577889999999765
No 412
>1cbg_A Cyanogenic beta-glucosidase; hydrolase (O-glycosyl); 2.15A {Trifolium repens} SCOP: c.1.8.4
Probab=55.88 E-value=20 Score=33.25 Aligned_cols=56 Identities=14% Similarity=0.056 Sum_probs=43.3
Q ss_pred CHHHHHHHHHhccCeeccCccccHHHHhhhC--CCCC---HHHHHHHHHHHHHcCCeeeeeE
Q 020848 117 EKHQAIELKKAGLTAYNHNLDTSREFYSKII--TTRS---YDERLETLKHVREAGINVCSGG 173 (320)
Q Consensus 117 ~~e~l~~L~~aGld~v~i~let~~~~~~~i~--~~~~---~~~~l~~i~~a~~~Gi~v~~~~ 173 (320)
-++.++.|+++|++.+.+|+ +-.+++..-. ..-+ ++-.-+.|+.+++.||.+-+++
T Consensus 75 ~~eDi~lm~~~G~~~~R~si-sWsRi~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL 135 (490)
T 1cbg_A 75 YKEDIGIMKDMNLDAYRFSI-SWPRVLPKGKLSGGVNREGINYYNNLINEVLANGMQPYVTL 135 (490)
T ss_dssp HHHHHHHHHHTTCCEEEEEC-CHHHHSTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHhCCCeEEecc-cHHHhCCCCCcCCCcCHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 48899999999999999998 3367766531 2234 7888889999999999865554
No 413
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=55.87 E-value=76 Score=26.12 Aligned_cols=69 Identities=12% Similarity=0.064 Sum_probs=47.5
Q ss_pred CHHHHHHHHHHHHH-cCCCEEEEecccCCCCCCchhHHHHHHHHHHhh-hc-CceEEEeCCCCCHHHHHHHHHhccCeec
Q 020848 57 TKDAVMQAAQKAKE-AGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DM-GMEVCCTLGMLEKHQAIELKKAGLTAYN 133 (320)
Q Consensus 57 s~eei~~~~~~~~~-~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k-~~-~~~i~~~~g~l~~e~l~~L~~aGld~v~ 133 (320)
++|.+.+.++...+ .|..-+++.+. |.+. ..+++++++ .. ++++.+--|..+.+.++++.+ |.|.+.
T Consensus 147 ~~e~~~~~a~~g~~~l~~~~Vyl~~~-----G~~~----~~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~~-gAd~VI 216 (234)
T 2f6u_A 147 DKELAASYALVGEKLFNLPIIYIEYS-----GTYG----NPELVAEVKKVLDKARLFYGGGIDSREKAREMLR-YADTII 216 (234)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEEECT-----TSCC----CHHHHHHHHHHCSSSEEEEESCCCSHHHHHHHHH-HSSEEE
T ss_pred CHHHHHHHHHhhhhhcCCCEEEEeCC-----CCcc----hHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHh-CCCEEE
Confidence 56666666665553 45566666542 2121 345556665 34 688888899999999999999 999998
Q ss_pred cC
Q 020848 134 HN 135 (320)
Q Consensus 134 i~ 135 (320)
++
T Consensus 217 VG 218 (234)
T 2f6u_A 217 VG 218 (234)
T ss_dssp EC
T ss_pred EC
Confidence 86
No 414
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=55.76 E-value=47 Score=28.51 Aligned_cols=47 Identities=15% Similarity=0.116 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHcCCCEEEEecccCCCCCCchh--HHHHHHHHHHhhhcCce
Q 020848 60 AVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTN--FNQILEYVKDIRDMGME 108 (320)
Q Consensus 60 ei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~--~~~l~~~i~~~k~~~~~ 108 (320)
.+.+.++.+.+.|++.|-+...... ..+.. ..++.++-+.+++.|+.
T Consensus 32 ~~~~~l~~~~~~G~~~vEl~~~~~~--~~~~~~~~~~~~~l~~~l~~~gL~ 80 (335)
T 2qw5_A 32 IVVAHIKKLQRFGYSGFEFPIAPGL--PENYAQDLENYTNLRHYLDSEGLE 80 (335)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCCC--GGGHHHHHHHHHHHHHHHHHTTCT
T ss_pred hHHHHHHHHHHhCCCEEEEecCCCc--ccccccchHHHHHHHHHHHHCCCC
Confidence 3445666677899999988643211 11111 13444444455567877
No 415
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=55.72 E-value=59 Score=28.66 Aligned_cols=40 Identities=23% Similarity=0.097 Sum_probs=26.5
Q ss_pred CCHHHHHHHHHHHHHcCCeeeeeEEEEe-CCCHHHHHHHHHHHhcC
Q 020848 150 RSYDERLETLKHVREAGINVCSGGIIGL-GEAEEDRVGLLHTLATL 194 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl-get~ed~~~~l~~l~~l 194 (320)
......++.++.+++.|+.+ +++. .++.=.....+.++ .+
T Consensus 274 GGit~~~~i~~~A~~~g~~~----~~~~~~es~i~~aa~~hla-a~ 314 (375)
T 1r0m_A 274 GGHAESRRVHDVAQSFGAPV----WCGGMLESGIGRAHNIHLS-TL 314 (375)
T ss_dssp TSHHHHHHHHHHHHHTTCCE----EECCCCCCHHHHHHHHHHT-TS
T ss_pred cCHHHHHHHHHHHHHcCCcE----EecCccccHHHHHHHHHHH-cC
Confidence 46888899999999999885 3333 35544455555555 44
No 416
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=55.67 E-value=36 Score=27.67 Aligned_cols=62 Identities=15% Similarity=0.109 Sum_probs=38.0
Q ss_pred CCCEEEEecccCCCCCCchhHHHHHHHHHHhhh-c-CceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 72 GSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-M-GMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 72 g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~-~-~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
+++.+.+.+-...++|.. ..+..++.++.+++ . ++++.+..| ++.+.+..+.++|+|.+-++
T Consensus 138 ~~d~vl~~sv~pg~~g~~-~~~~~l~~i~~~~~~~~~~pi~v~GG-I~~~ni~~~~~aGaD~vvvG 201 (228)
T 1h1y_A 138 PVELVLVMTVEPGFGGQK-FMPEMMEKVRALRKKYPSLDIEVDGG-LGPSTIDVAASAGANCIVAG 201 (228)
T ss_dssp CCSEEEEESSCTTCSSCC-CCGGGHHHHHHHHHHCTTSEEEEESS-CSTTTHHHHHHHTCCEEEES
T ss_pred CCCEEEEEeecCCCCccc-CCHHHHHHHHHHHHhcCCCCEEEECC-cCHHHHHHHHHcCCCEEEEC
Confidence 677776644322222322 22345555666663 2 567777766 44588888999999988776
No 417
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=55.24 E-value=68 Score=27.14 Aligned_cols=73 Identities=11% Similarity=0.110 Sum_probs=0.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc--hhHHHHHHHHHHhhhc--CceEEEeCCCCC----HHHHHHHHHh
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRDM--GMEVCCTLGMLE----KHQAIELKKA 127 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~--~~~~~l~~~i~~~k~~--~~~i~~~~g~l~----~e~l~~L~~a 127 (320)
++.+.+.+.++.+.+.|++.+++.|.+ ||- +..++-.++++.+.+. + +.+..|..+ .+..+...++
T Consensus 16 iD~~~l~~lv~~li~~Gv~gl~v~Gtt----GE~~~Ls~~Er~~v~~~~~~~~~g--vi~Gvg~~~t~~ai~la~~A~~~ 89 (286)
T 2r91_A 16 LDPELFANHVKNITSKGVDVVFVAGTT----GLGPALSLQEKMELTDAATSAARR--VIVQVASLNADEAIALAKYAESR 89 (286)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEETSTT----TTGGGSCHHHHHHHHHHHHHHCSS--EEEECCCSSHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHhCC--EEEeeCCCCHHHHHHHHHHHHhc
Q ss_pred ccCeecc
Q 020848 128 GLTAYNH 134 (320)
Q Consensus 128 Gld~v~i 134 (320)
|.|.+.+
T Consensus 90 Gadavlv 96 (286)
T 2r91_A 90 GAEAVAS 96 (286)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
No 418
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=55.13 E-value=22 Score=32.15 Aligned_cols=85 Identities=8% Similarity=0.082 Sum_probs=40.7
Q ss_pred hHHHHHHHHHHhhhcCceE-EEeCCCCCHHHHHHHHHhccCeeccC----ccccHHHHhhhCCC-----------CCHHH
Q 020848 91 NFNQILEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKAGLTAYNHN----LDTSREFYSKIITT-----------RSYDE 154 (320)
Q Consensus 91 ~~~~l~~~i~~~k~~~~~i-~~~~g~l~~e~l~~L~~aGld~v~i~----let~~~~~~~i~~~-----------~~~~~ 154 (320)
..++-.++++.+.+.++.. .-....-+.+.+++|++.- .+.+. +.+..+..+.+..+ .....
T Consensus 244 ~~~~A~~~~~~l~~~~l~~iEqP~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~a~div~~d~~~GGit~ 321 (412)
T 4h1z_A 244 TASEAVALIKAMEPHGLWFAEAPVRTEDIDGLARVAASV--STAIAVGEEWRTVHDMVPRVARRALAIVQPEMGHKGITQ 321 (412)
T ss_dssp CHHHHHHHHHHHGGGCEEEEECCSCTTCHHHHHHHHHHC--SSEEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHHHHH
T ss_pred CHHHHHHHHHhhcccccceecCCCCccchHHHHHHHhhc--CCccccCCcccchHhHHHHHHcCCCCEEEecCCCCChHH
Confidence 4566666667666666552 2222223456666666541 12221 11111221111110 12345
Q ss_pred HHHHHHHHHHcCCeeeeeEEEEe
Q 020848 155 RLETLKHVREAGINVCSGGIIGL 177 (320)
Q Consensus 155 ~l~~i~~a~~~Gi~v~~~~i~Gl 177 (320)
.++....|...|+.+.++.+.|.
T Consensus 322 ~~kia~~A~~~gi~v~~h~~~~~ 344 (412)
T 4h1z_A 322 FMRIGAYAHVHHIKVIPHATIGA 344 (412)
T ss_dssp HHHHHHHHHHTTCEECCCCCSSC
T ss_pred HHHHHHHHHHCCCcEEecCCcch
Confidence 56666667777887766665543
No 419
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=55.03 E-value=60 Score=26.91 Aligned_cols=125 Identities=11% Similarity=0.003 Sum_probs=0.0
Q ss_pred HHHHHHHHHHcCCCEEEEecccCCCCCCchhH-----HHHHHHHHHhhhcCceEEEeCCCC--------------CHHHH
Q 020848 61 VMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNF-----NQILEYVKDIRDMGMEVCCTLGML--------------EKHQA 121 (320)
Q Consensus 61 i~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~-----~~l~~~i~~~k~~~~~i~~~~g~l--------------~~e~l 121 (320)
+.+.++.+.+.|++.|-+.+.. ...+ ..+.++-+.+++.|+.+....... .++.+
T Consensus 17 ~~~~l~~~~~~G~~~vEl~~~~------~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~i 90 (286)
T 3dx5_A 17 FTDIVQFAYENGFEGIELWGTH------AQNLYMQEYETTERELNCLKDKTLEITMISDYLDISLSADFEKTIEKCEQLA 90 (286)
T ss_dssp HHHHHHHHHHTTCCEEEEEHHH------HHHHHHHCHHHHHHHHHHTGGGTCCEEEEECCCCCSTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEcccc------cccccccCHHHHHHHHHHHHHcCCeEEEEecCCCCCCchhHHHHHHHHHHHH
Q ss_pred HHHHHhccCeeccCcccc-HHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEe-CCCHHHHHHHHHHH
Q 020848 122 IELKKAGLTAYNHNLDTS-REFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL-GEAEEDRVGLLHTL 191 (320)
Q Consensus 122 ~~L~~aGld~v~i~let~-~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl-get~ed~~~~l~~l 191 (320)
+..++.|...|.+..-.. ......-....-.+..-+..+.+.+.|+.+.+.-.-+. ..+.+++.++++.+
T Consensus 91 ~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~l~~~~ 162 (286)
T 3dx5_A 91 ILANWFKTNKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLLETHPNTLTDTLPSTLELLGEV 162 (286)
T ss_dssp HHHHHHTCCEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCTTSTTSSHHHHHHHHHHH
T ss_pred HHHHHhCCCEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEEecCCCcCcCCHHHHHHHHHhc
No 420
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=54.99 E-value=25 Score=31.47 Aligned_cols=127 Identities=15% Similarity=0.073 Sum_probs=64.0
Q ss_pred CHHHHHHHHHHHHHc-CCC-EEEEecccCCCCCCchhHHHHHHHHHHhhhcCc--e-EEEeCCCCCHHHHHHHHHhccCe
Q 020848 57 TKDAVMQAAQKAKEA-GST-RFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGM--E-VCCTLGMLEKHQAIELKKAGLTA 131 (320)
Q Consensus 57 s~eei~~~~~~~~~~-g~~-~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~--~-i~~~~g~l~~e~l~~L~~aGld~ 131 (320)
++++-++.++.+++. |-. .+.+... + + ....++..++++.+.+.++ . +.-....-+.+.+++|++.- .
T Consensus 168 ~~~~d~~~v~avR~a~g~~~~l~~vDa-n---~-~~~~~~A~~~~~~l~~~~i~~~~iEqP~~~~d~~~~~~l~~~~--~ 240 (391)
T 3gd6_A 168 NLDADEEFLSRVKEEFGSRVRIKSYDF-S---H-LLNWKDAHRAIKRLTKYDLGLEMIESPAPRNDFDGLYQLRLKT--D 240 (391)
T ss_dssp CHHHHHHHHHHHHHHHGGGCEEEEEEC-T---T-CSCHHHHHHHHHHHTTCCSSCCEEECCSCTTCHHHHHHHHHHC--S
T ss_pred CHHHHHHHHHHHHHHcCCCCcEEEecC-C---C-CcCHHHHHHHHHHHHhcCCCcceecCCCChhhHHHHHHHHHHc--C
Confidence 455555556655543 432 3330221 1 1 1345666777777776666 4 22212223566777776641 1
Q ss_pred eccCcccc--H-HHHhhhC------------CCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcC
Q 020848 132 YNHNLDTS--R-EFYSKII------------TTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 194 (320)
Q Consensus 132 v~i~let~--~-~~~~~i~------------~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 194 (320)
+.+ -|+. . +..+.+. +-......++....|.+.|+.+.++.++ ++.=-+...+.++..+
T Consensus 241 iPI-dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~---es~i~~aa~~hlaaa~ 314 (391)
T 3gd6_A 241 YPI-SEHVWSFKQQQEMIKKDAIDIFNISPVFIGGLTSAKKAAYAAEVASKDVVLGTTQ---ELSVGTAAMAHLGCSL 314 (391)
T ss_dssp SCE-EEECCCHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCC---CCHHHHHHHHHHHTTC
T ss_pred CCc-CCCCCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHHHHHHHHcCCEEEecCCC---ccHHHHHHHHHHHHhC
Confidence 233 2222 1 2212111 0135677788888888999887665443 4444445555555444
No 421
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=54.95 E-value=85 Score=25.57 Aligned_cols=184 Identities=15% Similarity=0.157 Sum_probs=92.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEeccc-CCCCCCch-------------hHHHHHHHHHHhhhc-CceEEEeCCCCC----
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCMGAAW-RDTIGRKT-------------NFNQILEYVKDIRDM-GMEVCCTLGMLE---- 117 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l~~g~-~~~~ge~~-------------~~~~l~~~i~~~k~~-~~~i~~~~g~l~---- 117 (320)
+.+++.+.++.+.+. ++.+.++... .+....+. ......+.++.+++. ++++..-.+.-.
T Consensus 17 ~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~~pv~~~~~~~~~~~~ 95 (248)
T 1geq_A 17 DKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSSTPIVLMTYYNPIYRA 95 (248)
T ss_dssp CHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCCCCEEEEECHHHHHHH
T ss_pred CHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCCCCEEEEeccchhhhc
Confidence 457888888888777 8888886210 11111111 345567888888843 555432211111
Q ss_pred --HHHHHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEe-CCCHHHHHHHHHHHhcC
Q 020848 118 --KHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL-GEAEEDRVGLLHTLATL 194 (320)
Q Consensus 118 --~e~l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl-get~ed~~~~l~~l~~l 194 (320)
++.++.+.++|+|.+.++-... ++..+.++.+++.|.++ +++. ..+..+..+.+...
T Consensus 96 ~~~~~~~~~~~~Gad~v~~~~~~~-------------~~~~~~~~~~~~~g~~~----~~~i~~~t~~e~~~~~~~~--- 155 (248)
T 1geq_A 96 GVRNFLAEAKASGVDGILVVDLPV-------------FHAKEFTEIAREEGIKT----VFLAAPNTPDERLKVIDDM--- 155 (248)
T ss_dssp CHHHHHHHHHHHTCCEEEETTCCG-------------GGHHHHHHHHHHHTCEE----EEEECTTCCHHHHHHHHHH---
T ss_pred CHHHHHHHHHHCCCCEEEECCCCh-------------hhHHHHHHHHHHhCCCe----EEEECCCCHHHHHHHHHhc---
Confidence 5789999999999999863322 11234456667778664 3344 33444443333221
Q ss_pred CCCCCeeeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccCh-hHHHHHHHcCCceEeeCCcc
Q 020848 195 PTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSM-PEQALCFLAGANSIFTGEKL 272 (320)
Q Consensus 195 ~~~~~~v~~~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~-~~~~~~~~~Gan~~~~~~~~ 272 (320)
. ...+.+ +..+|+.-.. ....+ ..+..+...+.... ..+-..+ ++.. +.-...+.+|++.++.|..+
T Consensus 156 ~--d~~i~~---~~~~G~~g~~-~~~~~-~~~~~i~~l~~~~~-~pi~~~G---GI~~~e~i~~~~~~Gad~vivGsai 223 (248)
T 1geq_A 156 T--TGFVYL---VSLYGTTGAR-EEIPK-TAYDLLRRAKRICR-NKVAVGF---GVSKREHVVSLLKEGANGVVVGSAL 223 (248)
T ss_dssp C--SSEEEE---ECCC--------CCCH-HHHHHHHHHHHHCS-SCEEEES---CCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred C--CCeEEE---EECCccCCCC-CCCCh-hHHHHHHHHHhhcC-CCEEEEe---ecCCHHHHHHHHHcCCCEEEEcHHH
Confidence 1 112333 2334422111 11222 22334444444432 2222232 2333 33344558899999888644
No 422
>2jf7_A Strictosidine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.48A {Rauvolfia serpentina} PDB: 2jf6_A
Probab=54.77 E-value=24 Score=33.12 Aligned_cols=56 Identities=13% Similarity=0.094 Sum_probs=43.6
Q ss_pred CHHHHHHHHHhccCeeccCccccHHHHhhhC--CCCC---HHHHHHHHHHHHHcCCeeeeeE
Q 020848 117 EKHQAIELKKAGLTAYNHNLDTSREFYSKII--TTRS---YDERLETLKHVREAGINVCSGG 173 (320)
Q Consensus 117 ~~e~l~~L~~aGld~v~i~let~~~~~~~i~--~~~~---~~~~l~~i~~a~~~Gi~v~~~~ 173 (320)
-++.++.|+++|++.+.+|+ +-.+++..-. ..-+ ++-+-+.|+.+++.||..-+++
T Consensus 99 y~eDi~lm~~lG~~~~R~si-sWsRi~P~g~~~g~~n~~G~~~Y~~lid~l~~~GI~p~vtL 159 (532)
T 2jf7_A 99 YKEDIKIMKQTGLESYRFSI-SWSRVLPGGRLAAGVNKDGVKFYHDFIDELLANGIKPSVTL 159 (532)
T ss_dssp HHHHHHHHHHHTCSEEEEEC-CHHHHSTTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHcCCCeEeccc-cHHHhccCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 48899999999999999998 3377776532 2335 7888889999999999865553
No 423
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=54.71 E-value=63 Score=28.16 Aligned_cols=30 Identities=7% Similarity=0.070 Sum_probs=26.8
Q ss_pred CceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 106 GMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 106 ~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
++++..+.|..+.+.+.+...+|.|.|.++
T Consensus 251 ~ipvia~GGI~~~~d~~k~l~~GAd~V~iG 280 (349)
T 1p0k_A 251 ASTMIASGGLQDALDVAKAIALGASCTGMA 280 (349)
T ss_dssp TSEEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred CCeEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 688889999999999988888999999887
No 424
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=54.45 E-value=79 Score=25.01 Aligned_cols=99 Identities=16% Similarity=0.160 Sum_probs=59.7
Q ss_pred HHHHHHHHHcCCCEEEEecc-cCCCCCCchhHHHHHHHHHHhhh-cCceEEEeCCCCCHHHHHHHHHhccCeeccCcccc
Q 020848 62 MQAAQKAKEAGSTRFCMGAA-WRDTIGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTS 139 (320)
Q Consensus 62 ~~~~~~~~~~g~~~i~l~~g-~~~~~ge~~~~~~l~~~i~~~k~-~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~let~ 139 (320)
.+.++.+...+...+++.+- ..+++.+ .. .+.++.++. .++++...+|.-+.+.+.++.++|++.+-++=
T Consensus 133 ~~~i~~~~~~~~~~vli~~~~~~g~~~g-~~----~~~i~~~~~~~~~Pvia~~g~~~~~~~~~~~~~G~~~~~vg~--- 204 (237)
T 3cwo_X 133 RDWVVEVEKRGAGEILLTSIDRDGTKSG-YD----TEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAAS--- 204 (237)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTTTCCSC-CC----HHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHHTCSEEEESH---
T ss_pred HHHHHHHhhcCCCeEEEEecCCCCcccc-cc----HHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCcHHHhhhH---
Confidence 34444555677777877652 2232221 11 566666663 47788788888888888888889999876651
Q ss_pred HHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEE
Q 020848 140 REFYSKIITTRSYDERLETLKHVREAGINVCSGGII 175 (320)
Q Consensus 140 ~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~ 175 (320)
.++ ....++.+..+ .+++.|+.+...++.
T Consensus 205 -a~~---~~~~~~~~~~~---~l~~~~~~~~~~~~~ 233 (237)
T 3cwo_X 205 -VFH---FREIDVRELKE---YLKKHGVNVRLEGLL 233 (237)
T ss_dssp -HHH---TTSSCHHHHHH---HHHTTTCCCCEEEEE
T ss_pred -HHH---cCCCCHHHHHH---HHHHCCCceehhhhh
Confidence 121 22345655443 456677766555544
No 425
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=54.34 E-value=1e+02 Score=26.54 Aligned_cols=77 Identities=8% Similarity=0.050 Sum_probs=48.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecc-cCCCC--CCc-hhHHHHHHHHHHhhhcCceEEEeCCC-CCHHHHHHHHHhccC
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAA-WRDTI--GRK-TNFNQILEYVKDIRDMGMEVCCTLGM-LEKHQAIELKKAGLT 130 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g-~~~~~--ge~-~~~~~l~~~i~~~k~~~~~i~~~~g~-l~~e~l~~L~~aGld 130 (320)
-+|||..+.+ +.|++.+.+.-| .++.+ +.| +.++.| +-|+..-..++++..+.|. ++++.+++..+.|+.
T Consensus 172 T~Peea~~Fv----~TgvD~LAvaiGt~HG~Yk~~~p~Ld~~~L-~~I~~~v~~~vpLVlHGgSG~p~e~i~~ai~~GV~ 246 (306)
T 3pm6_A 172 TTPEESEEFV----ATGINWLAPAFGNVHGNYGPRGVQLDYERL-QRINEAVGERVGLVLHGADPFTKEIFEKCIERGVA 246 (306)
T ss_dssp CCHHHHHHHH----TTTCSEECCCSSCCSSCCCTTCCCCCHHHH-HHHHHHHTTTSEEEECSCTTCCHHHHHHHHHTTEE
T ss_pred CCHHHHHHHH----HcCCCEEEEEcCccccCcCCCCCccCHHHH-HHHHHHhCCCCCEEeeCCCCCCHHHHHHHHHcCCe
Confidence 4688887755 489887665322 23333 234 344333 3333221125777677666 889999999999999
Q ss_pred eeccCcc
Q 020848 131 AYNHNLD 137 (320)
Q Consensus 131 ~v~i~le 137 (320)
.|+++-+
T Consensus 247 KiNi~Td 253 (306)
T 3pm6_A 247 KVNVNRA 253 (306)
T ss_dssp EEEESHH
T ss_pred EEEeChH
Confidence 9988743
No 426
>1wcg_A Thioglucosidase, myrosinase; aphid, beta-glucosidase, insect, beta-barrel, hydrolase, glycosidase; 1.10A {Brevicoryne brassicae} SCOP: c.1.8.4
Probab=54.31 E-value=24 Score=32.42 Aligned_cols=56 Identities=9% Similarity=-0.004 Sum_probs=42.2
Q ss_pred CHHHHHHHHHhccCeeccCccccHHHHhhhC-CCCCH---HHHHHHHHHHHHcCCeeeeeE
Q 020848 117 EKHQAIELKKAGLTAYNHNLDTSREFYSKII-TTRSY---DERLETLKHVREAGINVCSGG 173 (320)
Q Consensus 117 ~~e~l~~L~~aGld~v~i~let~~~~~~~i~-~~~~~---~~~l~~i~~a~~~Gi~v~~~~ 173 (320)
-++.++.|+++|++.+.+|+ +-.+++..-. ..-++ +-.-+.|..+++.||.+-+++
T Consensus 61 ~~eDi~lm~~~G~~~~R~si-sWsRi~P~g~~g~~n~~Gl~~y~~~id~l~~~GI~p~vtL 120 (464)
T 1wcg_A 61 YKEDVAIIKDLNLKFYRFSI-SWARIAPSGVMNSLEPKGIAYYNNLINELIKNDIIPLVTM 120 (464)
T ss_dssp HHHHHHHHHHHTCSEEEEEC-CHHHHSTTSCTTSCCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hHHHHHHHHHhCCCeEEecc-cHHHhCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 48899999999999999998 3367766532 22344 666788899999999865554
No 427
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=54.30 E-value=81 Score=27.67 Aligned_cols=70 Identities=10% Similarity=0.060 Sum_probs=46.8
Q ss_pred HHHHHHcCCCEEEEeccc-CCC-------CCCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 65 AQKAKEAGSTRFCMGAAW-RDT-------IGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 65 ~~~~~~~g~~~i~l~~g~-~~~-------~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
++.+.+.|++-|.++.+. ... .+.| ...-+.++.+..+..++++....|..+...+.+...+|.+.|.++
T Consensus 175 A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p-~~~~l~~v~~~~~~~~ipvIa~GGI~~g~di~kAlalGA~~V~vG 252 (351)
T 2c6q_A 175 VEELILSGADIIKVGIGPGSVCTTRKKTGVGYP-QLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLG 252 (351)
T ss_dssp HHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCC-HHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHhCCCEEEECCCCCcCcCccccCCCCcc-HHHHHHHHHHHHhhcCCcEEEeCCCCCHHHHHHHHHcCCCceecc
Confidence 445566899988774321 000 0112 334445555554456789989999999999999999999999775
No 428
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=54.26 E-value=19 Score=29.97 Aligned_cols=74 Identities=16% Similarity=0.157 Sum_probs=43.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhc---CceEEEeCCCCCHHHHHHHHHhccCee
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM---GMEVCCTLGMLEKHQAIELKKAGLTAY 132 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~---~~~i~~~~g~l~~e~l~~L~~aGld~v 132 (320)
-+++|+.+ +.+.|++.+.++.- .++...+.....=++.++.+++. ++++..-.|. +.+.+..+.++|++.|
T Consensus 143 ht~~Ea~~----A~~~GaDyI~vgpv-f~T~tK~~~~~~gl~~l~~~~~~~~~~iPvvAiGGI-~~~ni~~~~~aGa~gv 216 (243)
T 3o63_A 143 HDPDQVAA----AAAGDADYFCVGPC-WPTPTKPGRAAPGLGLVRVAAELGGDDKPWFAIGGI-NAQRLPAVLDAGARRI 216 (243)
T ss_dssp CSHHHHHH----HHHSSCSEEEECCS-SCCCC-----CCCHHHHHHHHTC---CCCEEEESSC-CTTTHHHHHHTTCCCE
T ss_pred CCHHHHHH----HhhCCCCEEEEcCc-cCCCCCCCcchhhHHHHHHHHHhccCCCCEEEecCC-CHHHHHHHHHcCCCEE
Confidence 45666443 34579988887532 12211111001113444555532 5677666665 8999999999999998
Q ss_pred ccC
Q 020848 133 NHN 135 (320)
Q Consensus 133 ~i~ 135 (320)
.++
T Consensus 217 av~ 219 (243)
T 3o63_A 217 VVV 219 (243)
T ss_dssp EES
T ss_pred EEe
Confidence 875
No 429
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=54.12 E-value=35 Score=31.74 Aligned_cols=70 Identities=16% Similarity=0.171 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhc--CceEEEeCCCCCHHHHHHHHHhccCeeccCc
Q 020848 59 DAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTLGMLEKHQAIELKKAGLTAYNHNL 136 (320)
Q Consensus 59 eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~--~~~i~~~~g~l~~e~l~~L~~aGld~v~i~l 136 (320)
++..+.++.+.+.|++.+.+ +...|.+ ....+.++.+++. ++++.. .+..+.+.++.+.++|+|.|.++.
T Consensus 254 ~~~~~~a~~~~~aG~d~v~i----~~~~G~~---~~~~~~i~~i~~~~~~~pvi~-~~v~t~~~a~~l~~aGad~I~vg~ 325 (514)
T 1jcn_A 254 EDDKYRLDLLTQAGVDVIVL----DSSQGNS---VYQIAMVHYIKQKYPHLQVIG-GNVVTAAQAKNLIDAGVDGLRVGM 325 (514)
T ss_dssp TTHHHHHHHHHHTTCSEEEE----CCSCCCS---HHHHHHHHHHHHHCTTCEEEE-EEECSHHHHHHHHHHTCSEEEECS
T ss_pred hhhHHHHHHHHHcCCCEEEe----eccCCcc---hhHHHHHHHHHHhCCCCceEe-cccchHHHHHHHHHcCCCEEEECC
No 430
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=54.12 E-value=29 Score=28.27 Aligned_cols=67 Identities=10% Similarity=0.107 Sum_probs=42.0
Q ss_pred HHHHHHcCCCEE--EEecccCCCCC-CchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 65 AQKAKEAGSTRF--CMGAAWRDTIG-RKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 65 ~~~~~~~g~~~i--~l~~g~~~~~g-e~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
+..+.+.|++.+ .+.+....+.+ .+..+ +.++.+++.++++....|.-+.+.+..+.++|+|.+.++
T Consensus 146 a~~a~~~Gad~i~~~v~g~~~~~~~~~~~~~----~~i~~~~~~~ipvia~GGI~s~~~~~~~~~~Gad~v~vG 215 (234)
T 1yxy_A 146 GLVAHQAGIDFVGTTLSGYTPYSRQEAGPDV----ALIEALCKAGIAVIAEGKIHSPEEAKKINDLGVAGIVVG 215 (234)
T ss_dssp HHHHHHTTCSEEECTTTTSSTTSCCSSSCCH----HHHHHHHHTTCCEEEESCCCSHHHHHHHHTTCCSEEEEC
T ss_pred HHHHHHcCCCEEeeeccccCCCCcCCCCCCH----HHHHHHHhCCCCEEEECCCCCHHHHHHHHHCCCCEEEEc
Confidence 444556788877 34332211110 11222 344444422778888888888999999999999998886
No 431
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=54.00 E-value=8.3 Score=35.02 Aligned_cols=52 Identities=13% Similarity=0.068 Sum_probs=37.1
Q ss_pred CCHHHHHHHHHHHHHcCCeeeeeEEEEe-CCC----------HHHHHHHHHHHhcCCCCCCeeee
Q 020848 150 RSYDERLETLKHVREAGINVCSGGIIGL-GEA----------EEDRVGLLHTLATLPTHPESVPI 203 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl-get----------~ed~~~~l~~l~~l~~~~~~v~~ 203 (320)
.+.++..+.++.|++.|++|-+++++.+ ++. .+.+.+.+++-.+.| ++-+++
T Consensus 79 Gt~~d~~~lv~~ah~~Gi~vilD~V~NH~s~~~wF~~q~~~Vr~~~~~~~~~Wl~~g--vDGfRl 141 (424)
T 2dh2_A 79 GSKEDFDSLLQSAKKKSIRVILDLTPNYRGENSWFSTQVDTVATKVKDALEFWLQAG--VDGFQV 141 (424)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECCTTTTSSSTTCSSCHHHHHHHHHHHHHHHHHHT--CCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECCCcCCCcccccccCHHHHHHHHHHHHHHHHcC--CCEEEE
Confidence 4688889999999999999999999876 421 234556665544566 555555
No 432
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=53.98 E-value=42 Score=28.38 Aligned_cols=43 Identities=12% Similarity=0.138 Sum_probs=28.6
Q ss_pred HHHHHHHHHhhhc-CceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 93 NQILEYVKDIRDM-GMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 93 ~~l~~~i~~~k~~-~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
+.+.++++.+|+. +.++.+--|.-+++.++....+|.|.+-++
T Consensus 194 ~~~~~~v~~vr~~~~~Pv~vGfGIst~e~~~~~~~~gADgvIVG 237 (271)
T 3nav_A 194 MPVHALLERLQQFDAPPALLGFGISEPAQVKQAIEAGAAGAISG 237 (271)
T ss_dssp HHHHHHHHHHHHTTCCCEEECSSCCSHHHHHHHHHTTCSEEEES
T ss_pred hhHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 3456666666643 566666667677777776667777777665
No 433
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=53.97 E-value=46 Score=27.90 Aligned_cols=30 Identities=17% Similarity=0.079 Sum_probs=22.1
Q ss_pred CceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 106 GMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 106 ~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
++++.+-.|..+.+.+.++.++|.|.|.++
T Consensus 178 ~iPviv~gGI~t~eda~~~~~~GAdgViVG 207 (264)
T 1xm3_A 178 KVPVIVDAGIGSPKDAAYAMELGADGVLLN 207 (264)
T ss_dssp SSCBEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred CCCEEEEeCCCCHHHHHHHHHcCCCEEEEc
Confidence 566666667777888888888888877765
No 434
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=53.93 E-value=15 Score=32.76 Aligned_cols=18 Identities=11% Similarity=0.058 Sum_probs=10.2
Q ss_pred hHHHHHHHHHHhhhcCce
Q 020848 91 NFNQILEYVKDIRDMGME 108 (320)
Q Consensus 91 ~~~~l~~~i~~~k~~~~~ 108 (320)
..+...++++.+.+.|+.
T Consensus 254 ~~~~~~~la~~le~~Gvd 271 (376)
T 1icp_A 254 PTALGLYMVESLNKYDLA 271 (376)
T ss_dssp HHHHHHHHHHHHGGGCCS
T ss_pred CHHHHHHHHHHHHHcCCC
Confidence 344556666666655554
No 435
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=53.91 E-value=86 Score=25.30 Aligned_cols=127 Identities=13% Similarity=0.151 Sum_probs=63.7
Q ss_pred HHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCe
Q 020848 121 AIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPES 200 (320)
Q Consensus 121 l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~ 200 (320)
++.++++|+|.+.++..- |...+++.-+.++.+++.|+.+ ++-.+++.+. +.+.+++ ..
T Consensus 75 ~~~~~~~Gad~Vll~~se---------r~l~~~e~~~~~~~a~~~Gl~~----iv~v~~~~e~-----~~~~~~~--~~- 133 (219)
T 2h6r_A 75 AEAIKDCGCKGTLINHSE---------KRMLLADIEAVINKCKNLGLET----IVCTNNINTS-----KAVAALS--PD- 133 (219)
T ss_dssp HHHHHHHTCCEEEESBTT---------BCCBHHHHHHHHHHHHHHTCEE----EEEESSSHHH-----HHHTTTC--CS-
T ss_pred HHHHHHcCCCEEEECCcc---------ccCCHHHHHHHHHHHHHCCCeE----EEEeCCchHH-----HHHHhCC--CC-
Confidence 688899999999985411 1233445566777888888764 3434555442 3345555 33
Q ss_pred eeeeeeeecC--CCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccC-hhHHHHHHHcCCceEeeCCcccc
Q 020848 201 VPINALLAVK--GTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFS-MPEQALCFLAGANSIFTGEKLLT 274 (320)
Q Consensus 201 v~~~~~~p~~--gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~-~~~~~~~~~~Gan~~~~~~~~~~ 274 (320)
+..+.|.- ||... ....++++.....+..|.+..+..+-... ++. ++........|++.++.|..+..
T Consensus 134 --~i~~~~~~~iGtG~~-~~t~~~~~~~~~~~~ir~~~~~~~ii~gg---GI~~~~~~~~~~~~gaDgvlVGsAi~~ 204 (219)
T 2h6r_A 134 --CIAVEPPELIGTGIP-VSKANPEVVEGTVRAVKEINKDVKVLCGA---GISKGEDVKAALDLGAEGVLLASGVVK 204 (219)
T ss_dssp --EEEECCCC---------------CSHHHHHHHHHHCTTCEEEECS---SCCSHHHHHHHHTTTCCCEEESHHHHT
T ss_pred --EEEEEeccccccCCC-CccCCHHHHHHHHHHHHhccCCCeEEEEe---CcCcHHHHHHHhhCCCCEEEEcHHHhC
Confidence 34444432 33311 00112222234444455554333232222 333 33334456788999999875543
No 436
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=53.89 E-value=16 Score=32.67 Aligned_cols=41 Identities=24% Similarity=0.291 Sum_probs=25.9
Q ss_pred CHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcC
Q 020848 151 SYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 194 (320)
Q Consensus 151 ~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 194 (320)
.+...++....|...|+.+.++.++ ++.=-+...+.++..+
T Consensus 276 Git~~~~i~~~A~~~gi~~~~~~~~---es~ig~aa~~hlaaa~ 316 (389)
T 3s5s_A 276 GIAEALDIAAVARAAGLGLMIGGMV---ESVLAMTASACFAAGL 316 (389)
T ss_dssp HHHHHHHHHHHHHHTTCEEEECCSS---CCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCeEEecCCc---ccHHHHHHHHHHHhhC
Confidence 4566777788888899887666544 4443445555555444
No 437
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=53.65 E-value=32 Score=31.48 Aligned_cols=114 Identities=11% Similarity=0.151 Sum_probs=67.1
Q ss_pred CCHHHHHHHHHH-HHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeCCCC-CHHHHHHHHHhc-cCee
Q 020848 56 MTKDAVMQAAQK-AKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGML-EKHQAIELKKAG-LTAY 132 (320)
Q Consensus 56 ~s~eei~~~~~~-~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l-~~e~l~~L~~aG-ld~v 132 (320)
+++++.++.++. +.+.++.-| ..+.. +..++.+.++-+.+. ..+++....-.. +...++++.+.| +|.+
T Consensus 289 ~t~~eai~~~~~lle~y~i~~I------EdPl~-~dD~eg~~~L~~~~~-~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i 360 (449)
T 3uj2_A 289 FASEELVAHWKSLCERYPIVSI------EDGLD-EEDWEGWQYMTRELG-DKIQLVGDDLFVTNTERLNKGIKERCGNSI 360 (449)
T ss_dssp EEHHHHHHHHHHHHHHSCEEEE------ESCSC-TTCHHHHHHHHHHHT-TTSEEEESTTTTTCHHHHHHHHHTTCCSEE
T ss_pred cCHHHHHHHHHHHHHhcCceEE------ECCCC-cchHHHHHHHHHHhC-CCceEECCcceeCCHHHHHHHHHcCCCCEE
Confidence 688999988876 566653222 22221 223333333333221 145554433334 488888887776 5777
Q ss_pred ccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEe--CCCHHHHHHHHHHH
Q 020848 133 NHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL--GEAEEDRVGLLHTL 191 (320)
Q Consensus 133 ~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl--get~ed~~~~l~~l 191 (320)
.+.+ .+-....+.++.++.+...|+.+ ++++ |||.+.....+...
T Consensus 361 ~iKv----------~~iGGiTea~kia~lA~~~Gi~~----~v~H~sgET~d~~iadLaVa 407 (449)
T 3uj2_A 361 LIKL----------NQIGTVSETLEAIKMAHKAGYTA----VVSHRSGETEDTTIADLAVA 407 (449)
T ss_dssp EECH----------HHHCSHHHHHHHHHHHHHTTCEE----EEECCSBCCSCCHHHHHHHH
T ss_pred EECc----------cccCCHHHHHHHHHHHHHcCCeE----EEeCCCCCchHHHHHHHHHH
Confidence 7754 22356777889999999999875 4444 67766655544333
No 438
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=53.48 E-value=39 Score=30.12 Aligned_cols=67 Identities=13% Similarity=0.088 Sum_probs=41.9
Q ss_pred HHHHHHcCCCEEEEecc-cCCCCCCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 65 AQKAKEAGSTRFCMGAA-WRDTIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 65 ~~~~~~~g~~~i~l~~g-~~~~~ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
++.+.+.|++.|.+++. ++...+.+..+ +.+..++ ..+.++..+.|..+.+.+.++..+|.+.+.++
T Consensus 239 a~~a~~aGad~I~vs~~gg~~~d~~~~~~----~~l~~v~~~~~~pVia~GGI~~~~dv~kal~~GAdaV~iG 307 (380)
T 1p4c_A 239 ADRCIAEGADGVILSNHGGRQLDCAISPM----EVLAQSVAKTGKPVLIDSGFRRGSDIVKALALGAEAVLLG 307 (380)
T ss_dssp HHHHHHTTCSEEEECCGGGTSCTTCCCGG----GTHHHHHHHHCSCEEECSSCCSHHHHHHHHHTTCSCEEES
T ss_pred HHHHHHcCCCEEEEcCCCCCcCCCCcCHH----HHHHHHHHHcCCeEEEECCCCCHHHHHHHHHhCCcHhheh
Confidence 33445678988888432 22211112222 3333333 23558888999989888888888999999886
No 439
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=53.47 E-value=42 Score=29.11 Aligned_cols=72 Identities=11% Similarity=0.132 Sum_probs=46.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccc----------CC----------CCCCchhHHHHHHHHHHhh-hc-CceEEEeC
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAW----------RD----------TIGRKTNFNQILEYVKDIR-DM-GMEVCCTL 113 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~----------~~----------~~ge~~~~~~l~~~i~~~k-~~-~~~i~~~~ 113 (320)
+++++ ++.+.+.|++.|.+++++ +. ..| +.. .+.+..++ .. ++++..+.
T Consensus 193 ~~~e~----a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g-~~~----~~~l~~v~~~~~~ipvia~G 263 (332)
T 1vcf_A 193 LSREA----ALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIG-IPT----ARAILEVREVLPHLPLVASG 263 (332)
T ss_dssp CCHHH----HHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCS-CBH----HHHHHHHHHHCSSSCEEEES
T ss_pred CCHHH----HHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhcc-ccH----HHHHHHHHHhcCCCeEEEEC
Confidence 56655 445667899999885532 11 112 112 33344444 33 58888999
Q ss_pred CCCCHHHHHHHHHhccCeeccCc
Q 020848 114 GMLEKHQAIELKKAGLTAYNHNL 136 (320)
Q Consensus 114 g~l~~e~l~~L~~aGld~v~i~l 136 (320)
|..+.+.+.+...+|.|.|.++=
T Consensus 264 GI~~~~d~~kal~~GAd~V~igr 286 (332)
T 1vcf_A 264 GVYTGTDGAKALALGADLLAVAR 286 (332)
T ss_dssp SCCSHHHHHHHHHHTCSEEEECG
T ss_pred CCCCHHHHHHHHHhCCChHhhhH
Confidence 99888887777779999998863
No 440
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=53.47 E-value=16 Score=32.78 Aligned_cols=42 Identities=21% Similarity=0.169 Sum_probs=27.4
Q ss_pred CCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcC
Q 020848 150 RSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 194 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 194 (320)
..+...++....|...|+.+.++.++ ++.=-+...+.++..+
T Consensus 304 GGit~~~~ia~~A~~~gi~~~~~~~~---es~ig~aa~~hlaaa~ 345 (393)
T 3u9i_A 304 CGIVEALDIAAIARTAGLHLMIGGMV---ESLLAMTVSACFAAGQ 345 (393)
T ss_dssp HCHHHHHHHHHHHHHHTCEEEECCSS---CCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCeEEecCCc---ccHHHHHHHHHHHhcC
Confidence 35677788888888899887666544 4444455555555544
No 441
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=53.40 E-value=94 Score=25.58 Aligned_cols=175 Identities=17% Similarity=0.135 Sum_probs=94.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhc-CceEEEeCCC----CC-H---HHHHHHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM-GMEVCCTLGM----LE-K---HQAIELKK 126 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~-~~~i~~~~g~----l~-~---e~l~~L~~ 126 (320)
.+.+++.+.++.+.+.|+..+|+. |.+. ...+ .++.. ++.+++..|. .+ + ...++-.+
T Consensus 33 ~t~~~i~~l~~~a~~~~~~aVcv~---------p~~v-~a~~---~l~~~~~v~v~tvigFP~G~~~~~~k~~e~~~Av~ 99 (234)
T 1n7k_A 33 ATEEDVRNLVREASDYGFRCAVLT---------PVYT-VKIS---GLAEKLGVKLCSVIGFPLGQAPLEVKLVEAQTVLE 99 (234)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEC---------HHHH-HHHH---HHHHHHTCCEEEEESTTTCCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEc---------hHHh-eeeh---HhCCCCCceEEEEeCCCCCCCcHHHHHHHHHHHHH
Confidence 589999999999999999999874 3333 3333 33333 5565433232 22 2 34555667
Q ss_pred hccCeeccCcccc--HHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeee
Q 020848 127 AGLTAYNHNLDTS--REFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPIN 204 (320)
Q Consensus 127 aGld~v~i~let~--~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~ 204 (320)
.|.|.|.+-+.-. .+ .-.+++.+..+.+.+.|..+.+-+-.+. -+++++....+...+.| .+.|.-.
T Consensus 100 ~GAdEID~vinig~~~~--------~v~~ei~~v~~a~~~~g~~lKvIlEt~~-L~~e~i~~a~ria~eaG--ADfVKTs 168 (234)
T 1n7k_A 100 AGATELDVVPHLSLGPE--------AVYREVSGIVKLAKSYGAVVKVILEAPL-WDDKTLSLLVDSSRRAG--ADIVKTS 168 (234)
T ss_dssp HTCCEEEECCCGGGCHH--------HHHHHHHHHHHHHHHTTCEEEEECCGGG-SCHHHHHHHHHHHHHTT--CSEEESC
T ss_pred cCCCEEEEeccchHHHH--------HHHHHHHHHHHHHhhcCCeEEEEEeccC-CCHHHHHHHHHHHHHhC--CCEEEeC
Confidence 7999887765443 12 1122333333334455665433222222 26788999999999998 6766554
Q ss_pred eeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccChhHHHHHHHcCCceE
Q 020848 205 ALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSI 266 (320)
Q Consensus 205 ~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~~~~~~~~~~Gan~~ 266 (320)
. .+......+.+. .+..+ ++.... ..+.+++|--. .......+.+|++++
T Consensus 169 T-------G~~~~~gAt~~d-v~l~~-m~~~v~-v~VKaaGGirt--~~~al~~i~aGa~Ri 218 (234)
T 1n7k_A 169 T-------GVYTKGGDPVTV-FRLAS-LAKPLG-MGVKASGGIRS--GIDAVLAVGAGADII 218 (234)
T ss_dssp C-------SSSCCCCSHHHH-HHHHH-HHGGGT-CEEEEESSCCS--HHHHHHHHHTTCSEE
T ss_pred C-------CCCCCCCCCHHH-HHHHH-HHHHHC-CCEEEecCCCC--HHHHHHHHHcCcccc
Confidence 2 111101233333 22211 333333 44555554322 222344567898866
No 442
>3fj0_A Beta-glucosidase; BGLB,BGL, hydrolase, glycosidase; HET: BGC; 1.15A {Uncultured bacterium} PDB: 3cmj_A 3fiz_A* 3fiy_A*
Probab=53.06 E-value=25 Score=32.35 Aligned_cols=57 Identities=9% Similarity=0.036 Sum_probs=42.2
Q ss_pred CHHHHHHHHHhccCeeccCccccHHHHhhhCCCCCH---HHHHHHHHHHHHcCCeeeeeEE
Q 020848 117 EKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSY---DERLETLKHVREAGINVCSGGI 174 (320)
Q Consensus 117 ~~e~l~~L~~aGld~v~i~let~~~~~~~i~~~~~~---~~~l~~i~~a~~~Gi~v~~~~i 174 (320)
.++.++.|+++|++.+.+++ +-.+++..=...-+. +.+-+.|+.+++.||.+-+++.
T Consensus 81 y~eDi~lm~~lG~~~~R~si-sW~Ri~P~G~g~~n~~Gl~~y~~lid~l~~~GI~pivtL~ 140 (465)
T 3fj0_A 81 YEQDLDLMRQLGLKTYRFSI-AWARIQPDSSRQINQRGLDFYRRLVEGLHKRDILPMATLY 140 (465)
T ss_dssp HHHHHHHHHHHTCSEEEEEC-CHHHHCCSTTCCCCHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CHHHHHHHHHcCCCEEEccC-CHHHeeeCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeC
Confidence 48999999999999999998 326666542112244 6778889999999998655543
No 443
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=53.05 E-value=1e+02 Score=26.21 Aligned_cols=81 Identities=14% Similarity=0.127 Sum_probs=0.0
Q ss_pred CCCCCcCCCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc--hhHHHHHHHHHHhhhc--CceEEEeCCC-CCHHHHH
Q 020848 48 TGVKGQKLMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRDM--GMEVCCTLGM-LEKHQAI 122 (320)
Q Consensus 48 ~~~~~~~~~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~--~~~~~l~~~i~~~k~~--~~~i~~~~g~-l~~e~l~ 122 (320)
+.......++.+.+.+.++.+.+.|++.+++.|.+ ||- +..++-.++++.+.+. + +.+..|. -+.+.++
T Consensus 9 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~Gtt----GE~~~Ls~eEr~~v~~~~~~~~~g--viaGvg~~~t~~ai~ 82 (293)
T 1w3i_A 9 TPFTKDNRIDKEKLKIHAENLIRKGIDKLFVNGTT----GLGPSLSPEEKLENLKAVYDVTNK--IIFQVGGLNLDDAIR 82 (293)
T ss_dssp CCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTT----TTGGGSCHHHHHHHHHHHHTTCSC--EEEECCCSCHHHHHH
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHcCC--EEEecCCCCHHHHHH
Q ss_pred HHHHh---ccCeecc
Q 020848 123 ELKKA---GLTAYNH 134 (320)
Q Consensus 123 ~L~~a---Gld~v~i 134 (320)
..+.+ |.|.+.+
T Consensus 83 la~~A~~~Gadavlv 97 (293)
T 1w3i_A 83 LAKLSKDFDIVGIAS 97 (293)
T ss_dssp HHHHGGGSCCSEEEE
T ss_pred HHHHHHhcCCCEEEE
No 444
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=53.02 E-value=85 Score=24.96 Aligned_cols=183 Identities=13% Similarity=0.086 Sum_probs=87.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhc-CceE--EEeCC---CCCHHHHHHHHHhcc
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM-GMEV--CCTLG---MLEKHQAIELKKAGL 129 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~-~~~i--~~~~g---~l~~e~l~~L~~aGl 129 (320)
.+.++.++.++..... +-++-++.+...+.| .+.++.+++. +..+ -+..+ ......++.+.++|.
T Consensus 9 ~~l~~~~~~~~~~~~~-~~~~kv~~~~f~~~G--------~~~i~~lr~~~~~~v~~D~kl~DI~~t~~~~v~~~~~~Ga 79 (208)
T 2czd_A 9 YEGERAIKIAKSVKDY-ISMIKVNWPLILGSG--------VDIIRRLKEETGVEIIADLKLADIPNTNRLIARKVFGAGA 79 (208)
T ss_dssp CSHHHHHHHHHHHGGG-CSEEEEEHHHHHHHC--------TTHHHHHHHHHCCEEEEEEEECSCHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHhccc-ccEEEecHHHHHhhC--------HHHHHHHHHcCCCEEEEEeeeCchHHHHHHHHHHHHhcCC
Confidence 4566766666654322 345555543211112 1233444433 4332 22222 122566788999999
Q ss_pred CeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEe-CCC-----HHHHHHHHHHHhcCCCCCCeeee
Q 020848 130 TAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL-GEA-----EEDRVGLLHTLATLPTHPESVPI 203 (320)
Q Consensus 130 d~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl-get-----~ed~~~~l~~l~~l~~~~~~v~~ 203 (320)
|.+++..+...+. ++.+++.+ ++.++... .+. .+.+...+....+.| .+.+.+
T Consensus 80 d~vtvh~~~g~~~----------------i~~~~~~~---gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~G--~~G~~~ 138 (208)
T 2czd_A 80 DYVIVHTFVGRDS----------------VMAVKELG---EIIMVVEMSHPGALEFINPLTDRFIEVANEIE--PFGVIA 138 (208)
T ss_dssp SEEEEESTTCHHH----------------HHHHHTTS---EEEEECCCCSGGGGTTTGGGHHHHHHHHHHHC--CSEEEC
T ss_pred CEEEEeccCCHHH----------------HHHHHHhC---CcEEEEecCCcchhhHHHHHHHHHHHHHHHhC--CcEEEE
Confidence 9999987664222 44445554 33333333 111 223344455555665 333322
Q ss_pred eeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccChhHHHHHHHcCCceEeeCCccccCCCCChhHH
Q 020848 204 NALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDAD 283 (320)
Q Consensus 204 ~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~~~~~~~~~~~Gan~~~~~~~~~~~~~~~~~~~ 283 (320)
. | ..++++ ...|...+..++-+.+|-. ........++.+|++.++.|..+... .++.+.
T Consensus 139 ~---~-----------~~~~~i----~~lr~~~~~~~~iv~gGI~-~~g~~~~~~~~aGad~vvvGr~I~~a--~dp~~~ 197 (208)
T 2czd_A 139 P---G-----------TRPERI----GYIRDRLKEGIKILAPGIG-AQGGKAKDAVKAGADYIIVGRAIYNA--PNPREA 197 (208)
T ss_dssp C---C-----------SSTHHH----HHHHHHSCTTCEEEECCCC-SSTTHHHHHHHHTCSEEEECHHHHTS--SSHHHH
T ss_pred C---C-----------CChHHH----HHHHHhCCCCeEEEECCCC-CCCCCHHHHHHcCCCEEEEChHHhcC--CCHHHH
Confidence 1 1 112222 2334445543322554422 11112356778999999888644322 346666
Q ss_pred HHHHHH
Q 020848 284 QLMFKV 289 (320)
Q Consensus 284 ~~~i~~ 289 (320)
++.+++
T Consensus 198 ~~~l~~ 203 (208)
T 2czd_A 198 AKAIYD 203 (208)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665554
No 445
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=52.97 E-value=67 Score=28.32 Aligned_cols=43 Identities=14% Similarity=0.129 Sum_probs=29.6
Q ss_pred CCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 150 RSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
..+...++..+.+++.|+.+.++. ..++.=-+...+.++..++
T Consensus 272 GGi~~~~~i~~~A~~~g~~~~~~~---~~es~i~~aa~~hlaaa~~ 314 (378)
T 2qdd_A 272 GGLTRARQIRDFGVSVGWQMHIED---VGGTALADTAALHLAASTP 314 (378)
T ss_dssp TSHHHHHHHHHHHHHHTCEEEECC---SSCCHHHHHHHHHHHHTSC
T ss_pred CCHHHHHHHHHHHHHcCCeEEecC---CCCcHHHHHHHHHHHHcCC
Confidence 357777888899999999876553 3456555666666666554
No 446
>2e9l_A Cytosolic beta-glucosidase; novel cytosolic neutral beta-glycosylceramidase, hydrolase; HET: BGC PLM OLA; 1.60A {Homo sapiens} PDB: 2e9m_A* 2zox_A* 2jfe_X*
Probab=52.97 E-value=26 Score=32.26 Aligned_cols=57 Identities=16% Similarity=0.118 Sum_probs=42.8
Q ss_pred CCHHHHHHHHHhccCeeccCccccHHHHhhh-CCCCCH---HHHHHHHHHHHHcCCeeeeeE
Q 020848 116 LEKHQAIELKKAGLTAYNHNLDTSREFYSKI-ITTRSY---DERLETLKHVREAGINVCSGG 173 (320)
Q Consensus 116 l~~e~l~~L~~aGld~v~i~let~~~~~~~i-~~~~~~---~~~l~~i~~a~~~Gi~v~~~~ 173 (320)
.-++.++.|+++|++.+.+|+ +-.+++..- ...-++ +-.-+.|+.+++.||.+-+++
T Consensus 58 ~~~eDi~lm~~~G~~~~R~si-sWsRi~P~g~~g~~n~~Gl~~y~~lid~l~~~GI~p~vtL 118 (469)
T 2e9l_A 58 LWEEDLKCIKQLGLTHYRFSL-SWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTL 118 (469)
T ss_dssp CHHHHHHHHHHHTCSEEEEEC-CHHHHSTTSSTTSCCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHhCCCeEEccc-cHhhcccCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 458999999999999999998 336776653 122344 567788899999999865554
No 447
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=52.68 E-value=80 Score=26.18 Aligned_cols=82 Identities=11% Similarity=0.200 Sum_probs=51.1
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHH----hhhcCceEEEeCCCCCHHHHHHH-HHhccCe
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKD----IRDMGMEVCCTLGMLEKHQAIEL-KKAGLTA 131 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~----~k~~~~~i~~~~g~l~~e~l~~L-~~aGld~ 131 (320)
..+.+.+.++.+...|++.+.+..|..+. +....++.+.+.++. +++.|+.+...|..-+.+.+.+| .+.+-+.
T Consensus 100 ~~~~~~~~i~~a~~lG~~~v~~~~G~~~~-~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~l~~~~~~~~ 178 (290)
T 3tva_A 100 RVAEMKEISDFASWVGCPAIGLHIGFVPE-SSSPDYSELVRVTQDLLTHAANHGQAVHLETGQESADHLLEFIEDVNRPN 178 (290)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEECCCCCCC-TTSHHHHHHHHHHHHHHHHHHTTTCEEEEECCSSCHHHHHHHHHHHCCTT
T ss_pred HHHHHHHHHHHHHHcCCCEEEEcCCCCcc-cchHHHHHHHHHHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHHhcCCCC
Confidence 46778888888888999999885543221 122344444444444 44568887776655555555555 4456566
Q ss_pred eccCcccc
Q 020848 132 YNHNLDTS 139 (320)
Q Consensus 132 v~i~let~ 139 (320)
+.+-+|+.
T Consensus 179 ~g~~~D~~ 186 (290)
T 3tva_A 179 LGINFDPA 186 (290)
T ss_dssp EEEEECHH
T ss_pred EEEEeccH
Confidence 77777775
No 448
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=52.61 E-value=59 Score=28.82 Aligned_cols=44 Identities=7% Similarity=0.021 Sum_probs=19.7
Q ss_pred HHHHHHHHhhhcCceEEEeCCC-CCHHHH-HHHHHhccCeeccCcc
Q 020848 94 QILEYVKDIRDMGMEVCCTLGM-LEKHQA-IELKKAGLTAYNHNLD 137 (320)
Q Consensus 94 ~l~~~i~~~k~~~~~i~~~~g~-l~~e~l-~~L~~aGld~v~i~le 137 (320)
.+.+.++.+++.|+.+.++.|. ...+.+ +.+...|.++|.+++.
T Consensus 193 ~f~~~f~~A~~~gl~~~~HagE~~~~~~i~~al~~lg~~RIgHgv~ 238 (367)
T 3iar_A 193 GHVQAYQEAVKSGIHRTVHAGEVGSAEVVKEAVDILKTERLGHGYH 238 (367)
T ss_dssp HHHHHHHHHHHHTCEEEEEESSSSCHHHHHHHHHTSCCSEEEECGG
T ss_pred HHHHHHHHHHHcCCeeEEecCCcCChHHHHHHHHccCCceeeeeee
Confidence 4444444445455555554443 222332 2233345555555543
No 449
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=52.41 E-value=59 Score=26.65 Aligned_cols=41 Identities=12% Similarity=0.143 Sum_probs=19.8
Q ss_pred HHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCce
Q 020848 68 AKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGME 108 (320)
Q Consensus 68 ~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~ 108 (320)
+.+.|++-..+.+........+...+.+.+.++.++..|.+
T Consensus 60 ~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~ 100 (272)
T 2q02_A 60 AEKYGLEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGVGAR 100 (272)
T ss_dssp HHHTTCEEEEEEEETTTTSCCHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHcCCeEEechhhhccCCcHHHHHHHHHHHHHHHHHhCCC
Confidence 34467654444322111111233456666666666666665
No 450
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=52.20 E-value=47 Score=28.67 Aligned_cols=76 Identities=12% Similarity=0.052 Sum_probs=50.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc--hhHHHHHHHHHHhhh---cCceEEEeCCCCCHHH---HHHHHHh
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGMLEKHQ---AIELKKA 127 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~--~~~~~l~~~i~~~k~---~~~~i~~~~g~l~~e~---l~~L~~a 127 (320)
++.+.+.+.++.+.+.|++.+++.|.+ ||- +..++-.++++.+.+ -.+++.+..|.-+.+. .+...++
T Consensus 30 iD~~~l~~lv~~li~~Gv~Gl~v~GtT----GE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~~t~~ai~la~~A~~~ 105 (316)
T 3e96_A 30 IDWHHYKETVDRIVDNGIDVIVPCGNT----SEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGYATSTAIELGNAAKAA 105 (316)
T ss_dssp BCHHHHHHHHHHHHTTTCCEECTTSGG----GTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCccc----cCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCcCHHHHHHHHHHHHhc
Confidence 789999999999999999998875432 342 344555556655542 2466655555544444 4445667
Q ss_pred ccCeeccC
Q 020848 128 GLTAYNHN 135 (320)
Q Consensus 128 Gld~v~i~ 135 (320)
|+|.+.+-
T Consensus 106 Gadavlv~ 113 (316)
T 3e96_A 106 GADAVMIH 113 (316)
T ss_dssp TCSEEEEC
T ss_pred CCCEEEEc
Confidence 99988763
No 451
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=52.19 E-value=10 Score=34.18 Aligned_cols=72 Identities=15% Similarity=0.131 Sum_probs=45.4
Q ss_pred hHHHHHHHHHHhhhcCce-EEEeCCCCCHHHHHHHHHhccCeeccCccccHHHHhhhC-C-CCCHHHHHHHHHHHHHcCC
Q 020848 91 NFNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKAGLTAYNHNLDTSREFYSKII-T-TRSYDERLETLKHVREAGI 167 (320)
Q Consensus 91 ~~~~l~~~i~~~k~~~~~-i~~~~g~l~~e~l~~L~~aGld~v~i~let~~~~~~~i~-~-~~~~~~~l~~i~~a~~~Gi 167 (320)
.+..+.+.+..+++.|+. +.+++-.-.. ...|-+ +.-|..+. + -.+.++..+.++.|++.|+
T Consensus 19 ~~~gi~~~ldyl~~lGv~~i~l~Pi~~~~------~~~gY~---------~~d~~~id~~~~Gt~~d~~~lv~~~h~~Gi 83 (405)
T 1ht6_A 19 WYNMMMGKVDDIAAAGVTHVWLPPPSHSV------SNEGYM---------PGRLYDIDASKYGNAAELKSLIGALHGKGV 83 (405)
T ss_dssp HHHHHHTTHHHHHHTTCCEEEECCCSCBS------STTSSS---------BCCTTCGGGCTTCCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCccCC------CCCCCC---------ccccccCCCccCCCHHHHHHHHHHHHHCCC
Confidence 467777777777777765 4444322111 011211 11122223 2 2478889999999999999
Q ss_pred eeeeeEEEEe
Q 020848 168 NVCSGGIIGL 177 (320)
Q Consensus 168 ~v~~~~i~Gl 177 (320)
+|-+++++.+
T Consensus 84 ~VilD~V~NH 93 (405)
T 1ht6_A 84 QAIADIVINH 93 (405)
T ss_dssp EEEEEECCSB
T ss_pred EEEEEECcCc
Confidence 9999999987
No 452
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A*
Probab=52.09 E-value=70 Score=28.77 Aligned_cols=80 Identities=18% Similarity=0.389 Sum_probs=52.4
Q ss_pred CCHHHHHHHHHHHH-----HcCCCEEEEecccCC----CCCC----chhHHH-HHHHHHHhhhcCce--EEEeCC-----
Q 020848 56 MTKDAVMQAAQKAK-----EAGSTRFCMGAAWRD----TIGR----KTNFNQ-ILEYVKDIRDMGME--VCCTLG----- 114 (320)
Q Consensus 56 ~s~eei~~~~~~~~-----~~g~~~i~l~~g~~~----~~ge----~~~~~~-l~~~i~~~k~~~~~--i~~~~g----- 114 (320)
++.+.|++.++.+. +.|++.|.|=.|+.. ..|. |..++. +-.+++.+++.|+. +....|
T Consensus 33 i~e~~i~~~ad~~~~~Gl~~~G~~~~~iDDgW~~~~rd~~G~~~~~~~kFP~Gl~~l~~~ih~~Glk~Giw~~~g~~tC~ 112 (404)
T 3hg3_A 33 ISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCA 112 (404)
T ss_dssp SSHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTSTTHHHHHHHHHHHTTCEEEEEEESSSBCTT
T ss_pred cCHHHHHHHHHHHHHCCcHhhCCeEEEECCCcCCCCCCCCCCeeeChhhcCCCHHHHHHHHHHCCCeeEEEecCCccccC
Confidence 78899999998764 568888888655533 1221 233343 77777888877766 333333
Q ss_pred ----CC--CHHHHHHHHHhccCeeccC
Q 020848 115 ----ML--EKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 115 ----~l--~~e~l~~L~~aGld~v~i~ 135 (320)
.+ .+..++.+++=|+|.+-+.
T Consensus 113 ~~pGs~~~~~~da~~fa~WGvDylK~D 139 (404)
T 3hg3_A 113 GFPGSFGYYDIDAQTFADWGVDLLKFA 139 (404)
T ss_dssp SSBCCTTCHHHHHHHHHHHTCCEEEEE
T ss_pred CCCccHHHHHHHHHHHHHhCCcEEEec
Confidence 32 3556788888899988764
No 453
>1qox_A Beta-glucosidase; hydrolase, cellulose degradation; 2.7A {Bacillus circulans} SCOP: c.1.8.4
Probab=52.09 E-value=28 Score=31.87 Aligned_cols=58 Identities=12% Similarity=0.079 Sum_probs=42.8
Q ss_pred CCHHHHHHHHHhccCeeccCccccHHHHhhhCCCCCH---HHHHHHHHHHHHcCCeeeeeEE
Q 020848 116 LEKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSY---DERLETLKHVREAGINVCSGGI 174 (320)
Q Consensus 116 l~~e~l~~L~~aGld~v~i~let~~~~~~~i~~~~~~---~~~l~~i~~a~~~Gi~v~~~~i 174 (320)
.-++.++.|+++|++.+.+++ +-.+++..=...-+. +..-+.|+.+++.||.+-+++.
T Consensus 59 ~~~eDi~lm~~~G~~~~R~si-~W~ri~P~G~g~~n~~Gl~~y~~~id~l~~~gI~p~vtL~ 119 (449)
T 1qox_A 59 RVEEDVQLLKDLGVKVYRFSI-SWPRVLPQGTGEVNRAGLDYYHRLVDELLANGIEPFCTLY 119 (449)
T ss_dssp CHHHHHHHHHHHTCSEEEEEC-CHHHHSTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred hhHHHHHHHHhcCCCeEEecC-cHHHhCcCCCCCcCHHHHHHHHHHHHHHHHcCCeEEEEeC
Confidence 458999999999999999998 336666652112244 5667888999999998666553
No 454
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=52.05 E-value=11 Score=34.34 Aligned_cols=28 Identities=25% Similarity=0.165 Sum_probs=25.6
Q ss_pred CCHHHHHHHHHHHHHcCCeeeeeEEEEe
Q 020848 150 RSYDERLETLKHVREAGINVCSGGIIGL 177 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl 177 (320)
.+.++..+.++.|++.||+|-+++++.+
T Consensus 67 Gt~~df~~lv~~aH~~Gi~VilD~V~NH 94 (441)
T 1lwj_A 67 GSEREFKEMIEAFHDSGIKVVLDLPIHH 94 (441)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECTTB
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEeCCCc
Confidence 4788899999999999999999999988
No 455
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=51.75 E-value=43 Score=28.70 Aligned_cols=18 Identities=39% Similarity=0.470 Sum_probs=9.9
Q ss_pred HHHHHcCCceEeeCCccc
Q 020848 256 ALCFLAGANSIFTGEKLL 273 (320)
Q Consensus 256 ~~~~~~Gan~~~~~~~~~ 273 (320)
...+.+||+.+..|..++
T Consensus 260 ~~~l~~GAd~V~ig~~~l 277 (314)
T 2e6f_A 260 FLHILAGASMVQVGTALQ 277 (314)
T ss_dssp HHHHHHTCSSEEECHHHH
T ss_pred HHHHHcCCCEEEEchhhH
Confidence 344556666666554443
No 456
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=51.65 E-value=52 Score=28.98 Aligned_cols=80 Identities=13% Similarity=-0.010 Sum_probs=53.8
Q ss_pred CCHHHHHHHHHHHHHcC-CCEEEEeccc----------C--------CCCC--CchhHHHHHHHHHHhhhc--CceEEEe
Q 020848 56 MTKDAVMQAAQKAKEAG-STRFCMGAAW----------R--------DTIG--RKTNFNQILEYVKDIRDM--GMEVCCT 112 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g-~~~i~l~~g~----------~--------~~~g--e~~~~~~l~~~i~~~k~~--~~~i~~~ 112 (320)
++.+++.+.++.+.+.| ++.|.+.... . ..+| .+...+.-++.++.+++. ++++..+
T Consensus 204 ~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~ipII~~ 283 (354)
T 4ef8_A 204 FDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLIFGC 283 (354)
T ss_dssp CSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCCCCCEEEE
Confidence 46777877777777777 7776642100 0 0011 122345557777777743 5888899
Q ss_pred CCCCCHHHHHHHHHhccCeeccC
Q 020848 113 LGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 113 ~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
.|..+.+.+.++..+|.|.|.++
T Consensus 284 GGI~s~~da~~~l~aGAd~V~vg 306 (354)
T 4ef8_A 284 GGVYTGEDAFLHVLAGASMVQVG 306 (354)
T ss_dssp SCCCSHHHHHHHHHHTEEEEEEC
T ss_pred CCcCCHHHHHHHHHcCCCEEEEh
Confidence 99999888888888999998886
No 457
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A
Probab=51.53 E-value=17 Score=33.99 Aligned_cols=53 Identities=11% Similarity=0.055 Sum_probs=38.9
Q ss_pred CHHHHHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeee
Q 020848 117 EKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVC 170 (320)
Q Consensus 117 ~~e~l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~ 170 (320)
-++.++.|+++|++.|.+++ .-..+-..-...-+|+...+.++.+++.|+++.
T Consensus 31 w~~dl~~mk~~Gln~Vr~~V-~W~~iEP~g~G~ydf~~~d~~id~a~~~GL~vi 83 (516)
T 1vem_A 31 FENDLRWAKQNGFYAITVDF-WWGDMEKNGDQQFDFSYAQRFAQSVKNAGMKMI 83 (516)
T ss_dssp HHHHHHHHHHTTEEEEEEEE-EHHHHTCSSTTCCCCHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHcCCCEEEEec-chhhccCCCCCccchHHHHHHHHHHHHCCCEEE
Confidence 47789999999999999987 214333321123478888889999999999965
No 458
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=51.41 E-value=1.2e+02 Score=26.10 Aligned_cols=39 Identities=13% Similarity=0.260 Sum_probs=19.6
Q ss_pred HHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 156 LETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 156 l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
++....+++.|+.+..++.. .+-|.+++.+.+..+.++|
T Consensus 61 ~~~a~~i~~~g~~~i~Hltc-~~~~~~~l~~~L~~~~~~G 99 (310)
T 3apt_A 61 VAWAQRIQSLGLNPLAHLTV-AGQSRKEVAEVLHRFVESG 99 (310)
T ss_dssp HHHHHHHHHTTCCBCEEEEC-TTSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCeEEEeec-CCCCHHHHHHHHHHHHHCC
Confidence 33344444455555555443 3455555555555555555
No 459
>3qst_A Triosephosphate isomerase, putative; TIM barrel; 1.75A {Trichomonas vaginalis} PDB: 3qsr_A
Probab=51.41 E-value=1.1e+02 Score=25.63 Aligned_cols=135 Identities=18% Similarity=0.180 Sum_probs=77.6
Q ss_pred HHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHH----------HHHH
Q 020848 121 AIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVG----------LLHT 190 (320)
Q Consensus 121 l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~----------~l~~ 190 (320)
...|+++|++++-++- .-++.+ -+.+-+.+-+.++.+.+.|+.+ |+-.||+.++... +-..
T Consensus 82 ~~mL~d~G~~~ViiGH----SERR~~-f~Etd~~v~~Kv~~Al~~GL~p----IlCvGEtleere~g~t~~vv~~Ql~~~ 152 (255)
T 3qst_A 82 VPMIKSFGIEWTILGH----SERRDI-LKEDDEFLAAKAKFALENGMKI----IYCCGEHLSEREAGKASEFVSAQIEKM 152 (255)
T ss_dssp HHHHHTTTCCEEEESC----HHHHHT-SCCCHHHHHHHHHHHHHTTCEE----EEEECCCHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECc----hhhhhh-cCCCHHHHHHHHHHHHHCCCeE----EEEcCCcHHHHHcCCHHHHHHHHHHHH
Confidence 5667889999998875 222222 1456777788889999999864 5556888876521 2222
Q ss_pred HhcCCC-CCCeeeeeeeeecC--CCCCCCCCCCCHHHHHHHHHHHHHhCCC-------ceeec-CCcccccChhHHHHHH
Q 020848 191 LATLPT-HPESVPINALLAVK--GTPLQDQKPVEIWEMIRMIATARIVMPK-------AMVRL-SAGRVRFSMPEQALCF 259 (320)
Q Consensus 191 l~~l~~-~~~~v~~~~~~p~~--gt~~~~~~~~~~~e~~~~~a~~R~~~p~-------~~i~~-~~g~~~~~~~~~~~~~ 259 (320)
+..+.. ....+ +..|-|+= ||. ...++++...+.+..|..+.. ..+++ -+|-++- .+......
T Consensus 153 l~~~~~~~~~~~-vIAYEPvWAIGTG----~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~-~N~~~l~~ 226 (255)
T 3qst_A 153 IPAIPAGKWDDV-VIAYEPIWAIGTG----KVASTQDAQEMCKVIRDILAAKVGADIANKVRILYGGSVKP-NNCNELAA 226 (255)
T ss_dssp GGGSCTTCGGGE-EEEECCGGGSSSS----CCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCEEEECSCCCT-TTHHHHHH
T ss_pred HccCCHHHhCCE-EEEECCHHHhcCC----CCCCHHHHHHHHHHHHHHHHHhcChhhcCcccEEEcCCcCH-hHHHHHhc
Confidence 233221 11222 34666643 654 246788877887777766432 11232 1222221 22234555
Q ss_pred HcCCceEeeCC
Q 020848 260 LAGANSIFTGE 270 (320)
Q Consensus 260 ~~Gan~~~~~~ 270 (320)
..+++.++.|.
T Consensus 227 ~~diDG~LVGg 237 (255)
T 3qst_A 227 CPDVDGFLVGG 237 (255)
T ss_dssp STTCCEEEECG
T ss_pred CCCCCEEEeeH
Confidence 67888888775
No 460
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=51.32 E-value=54 Score=28.30 Aligned_cols=76 Identities=7% Similarity=0.026 Sum_probs=49.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCc--hhHHHHHHHHHHhhh---cCceEEEeCCCCCHHH---HHHHHHh
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGMLEKHQ---AIELKKA 127 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~--~~~~~l~~~i~~~k~---~~~~i~~~~g~l~~e~---l~~L~~a 127 (320)
++.+.+.+.++.+.+.|++.+++.|.+ ||- +..++-.++++.+.+ -.+++.+..|.-+.+. .+...++
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~GtT----GE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~st~~ai~la~~A~~~ 105 (314)
T 3d0c_A 30 IDWKGLDDNVEFLLQNGIEVIVPNGNT----GEFYALTIEEAKQVATRVTELVNGRATVVAGIGYSVDTAIELGKSAIDS 105 (314)
T ss_dssp BCHHHHHHHHHHHHHTTCSEECTTSGG----GTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECccc----CChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCcCHHHHHHHHHHHHHc
Confidence 788999999999999999998775432 332 344555555555442 2467666555533444 3444566
Q ss_pred ccCeeccC
Q 020848 128 GLTAYNHN 135 (320)
Q Consensus 128 Gld~v~i~ 135 (320)
|.|.+.+-
T Consensus 106 Gadavlv~ 113 (314)
T 3d0c_A 106 GADCVMIH 113 (314)
T ss_dssp TCSEEEEC
T ss_pred CCCEEEEC
Confidence 99988764
No 461
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=51.20 E-value=95 Score=25.02 Aligned_cols=170 Identities=9% Similarity=0.061 Sum_probs=87.7
Q ss_pred CCHH--HHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhh-cCceEE-Ee-----C-CC---CCHHHHH
Q 020848 56 MTKD--AVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVC-CT-----L-GM---LEKHQAI 122 (320)
Q Consensus 56 ~s~e--ei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~-~~~~i~-~~-----~-g~---l~~e~l~ 122 (320)
.+++ ++.+.++.+.+.|+..+.+.+ | +.++.+++ .++++. .. . +. .+.+.++
T Consensus 31 ~~~~~~~~~~~a~~~~~~G~~~i~~~~--------~-------~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~~~~i~ 95 (234)
T 1yxy_A 31 YSETGGIMPLMAKAAQEAGAVGIRANS--------V-------RDIKEIQAITDLPIIGIIKKDYPPQEPFITATMTEVD 95 (234)
T ss_dssp CCTTCCSHHHHHHHHHHHTCSEEEEES--------H-------HHHHHHHTTCCSCEEEECBCCCTTSCCCBSCSHHHHH
T ss_pred cCCccchHHHHHHHHHHCCCcEeecCC--------H-------HHHHHHHHhCCCCEEeeEcCCCCccccccCChHHHHH
Confidence 3456 677778888888998886631 2 22444443 345542 11 1 11 2578899
Q ss_pred HHHHhccCeeccCccccHHHHhhhCC-CCCHHHHHHHHHHHHHc--CCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCC
Q 020848 123 ELKKAGLTAYNHNLDTSREFYSKIIT-TRSYDERLETLKHVREA--GINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPE 199 (320)
Q Consensus 123 ~L~~aGld~v~i~let~~~~~~~i~~-~~~~~~~l~~i~~a~~~--Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~ 199 (320)
.+.++|.|.|.++.+... ++ +... .+.++.+++. +..+ +++. .+.++ +..+.+.| ++
T Consensus 96 ~~~~~Gad~V~l~~~~~~------~~~~~~~---~~~i~~i~~~~~~~~v----~~~~-~t~~e----a~~a~~~G--ad 155 (234)
T 1yxy_A 96 QLAALNIAVIAMDCTKRD------RHDGLDI---ASFIRQVKEKYPNQLL----MADI-STFDE----GLVAHQAG--ID 155 (234)
T ss_dssp HHHTTTCSEEEEECCSSC------CTTCCCH---HHHHHHHHHHCTTCEE----EEEC-SSHHH----HHHHHHTT--CS
T ss_pred HHHHcCCCEEEEcccccC------CCCCccH---HHHHHHHHHhCCCCeE----EEeC-CCHHH----HHHHHHcC--CC
Confidence 999999999987654320 01 1233 3445555554 4332 2222 35555 34445566 66
Q ss_pred ee--eeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCceeecCCcccccC-hhHHHHHHHcCCceEeeCCccc
Q 020848 200 SV--PINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFS-MPEQALCFLAGANSIFTGEKLL 273 (320)
Q Consensus 200 ~v--~~~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~i~~~~g~~~~~-~~~~~~~~~~Gan~~~~~~~~~ 273 (320)
.+ .+..+.| ++. ....++.+.+.++ +.. +..+-..+ ++. .+.....+.+||+.++.|..+.
T Consensus 156 ~i~~~v~g~~~--~~~--~~~~~~~~~i~~~----~~~--~ipvia~G---GI~s~~~~~~~~~~Gad~v~vGsal~ 219 (234)
T 1yxy_A 156 FVGTTLSGYTP--YSR--QEAGPDVALIEAL----CKA--GIAVIAEG---KIHSPEEAKKINDLGVAGIVVGGAIT 219 (234)
T ss_dssp EEECTTTTSST--TSC--CSSSCCHHHHHHH----HHT--TCCEEEES---CCCSHHHHHHHHTTCCSEEEECHHHH
T ss_pred EEeeeccccCC--CCc--CCCCCCHHHHHHH----HhC--CCCEEEEC---CCCCHHHHHHHHHCCCCEEEEchHHh
Confidence 67 4444433 331 1122333322222 211 22222222 233 3444566778999999987544
No 462
>3th6_A Triosephosphate isomerase; alpha/beta barrel, embryogenesis, glycolysis; 2.40A {Rhipicephalus microplus}
Probab=51.18 E-value=1.1e+02 Score=25.54 Aligned_cols=134 Identities=21% Similarity=0.136 Sum_probs=74.1
Q ss_pred HHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHH----------HHHHH
Q 020848 121 AIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRV----------GLLHT 190 (320)
Q Consensus 121 l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~----------~~l~~ 190 (320)
...|+++|++++-++- .-++.+ -+.+-+.+-+.++.+.+.|+.+ |+-.||+.++.. ++-..
T Consensus 80 ~~mL~d~G~~~ViiGH----SERR~~-f~Etd~~v~~Kv~~Al~~GL~p----I~CvGEtleere~g~t~~vv~~Ql~~~ 150 (249)
T 3th6_A 80 PGMIKDCGGQWVILGH----SERRHV-FKEDDVLIGEKIKHALESGLNV----IACIGELLEDREAGRTEEVCFRQIKHI 150 (249)
T ss_dssp HHHHHHTTCCEEEESC----HHHHHT-SCCCHHHHHHHHHHHHHTTCEE----EEEECCCHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECc----hhhccc-cCCCHHHHHHHHHHHHHCCCEE----EEEcCCcHHHHhcCCHHHHHHHHHHHH
Confidence 5567888999998875 112222 1456777778889999999864 555688877652 11122
Q ss_pred HhcCCCCCCeeeeeeeeecC--CCCCCCCCCCCHHHHHHHHHHHHHhCCCc-------eeec-CCcccccChhHHHHHHH
Q 020848 191 LATLPTHPESVPINALLAVK--GTPLQDQKPVEIWEMIRMIATARIVMPKA-------MVRL-SAGRVRFSMPEQALCFL 260 (320)
Q Consensus 191 l~~l~~~~~~v~~~~~~p~~--gt~~~~~~~~~~~e~~~~~a~~R~~~p~~-------~i~~-~~g~~~~~~~~~~~~~~ 260 (320)
+..+. .... -+..|-|+= ||. ...++++...+.+..|..+... .+++ -+|-++- .+.......
T Consensus 151 l~~~~-~~~~-~vIAYEPvWAIGTG----~~At~e~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~-~N~~~l~~~ 223 (249)
T 3th6_A 151 ASNVK-DWSK-VVIAYEPVWAIGTG----KTATPDQAQEVHSKVRNWLSTNVSADVASKVRIQYGGSVNA-GNCKELGRK 223 (249)
T ss_dssp HTTCS-CGGG-EEEEECCTTTCCC-------CCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEECSCCCT-TTHHHHHTS
T ss_pred Hhchh-hhcC-EEEEECCcchhcCC----CCCCHHHHHHHHHHHHHHHHHhhChhhcccccEEEcCccCH-hHHHHHhcC
Confidence 22221 1112 245666632 553 3467888778777777654211 1222 1222221 222344556
Q ss_pred cCCceEeeCC
Q 020848 261 AGANSIFTGE 270 (320)
Q Consensus 261 ~Gan~~~~~~ 270 (320)
.+++.++.|.
T Consensus 224 ~diDG~LVGg 233 (249)
T 3th6_A 224 PDIDGFLVGG 233 (249)
T ss_dssp TTCCEEEECG
T ss_pred CCCCEEEeeh
Confidence 7888887775
No 463
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=51.16 E-value=61 Score=27.56 Aligned_cols=79 Identities=15% Similarity=0.084 Sum_probs=0.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEE-ecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeCCCCC----HHHHHHHHHhccC
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCM-GAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLE----KHQAIELKKAGLT 130 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l-~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~----~e~l~~L~~aGld 130 (320)
++.+.+.+.++.+.+.|++.+++ ++.+....-.......+++.+...-.-.+++.+..|..+ .+..+...++|.|
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gad 97 (292)
T 2vc6_A 18 IDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGAD 97 (292)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCC
Q ss_pred eecc
Q 020848 131 AYNH 134 (320)
Q Consensus 131 ~v~i 134 (320)
.+.+
T Consensus 98 avlv 101 (292)
T 2vc6_A 98 GVLI 101 (292)
T ss_dssp EEEE
T ss_pred EEEE
No 464
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=51.02 E-value=55 Score=29.24 Aligned_cols=28 Identities=11% Similarity=0.160 Sum_probs=24.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccC
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWR 83 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~ 83 (320)
++.+-+.+.-+.+++.|++...|+.|..
T Consensus 181 Ls~~~f~~~n~~~k~~Gi~t~AFI~g~~ 208 (385)
T 1x7f_A 181 LPYDYFIRCSERFKKHGIRSAAFITSHV 208 (385)
T ss_dssp BCHHHHHHHHHHHHHTTCCCEEEECCSS
T ss_pred CCHHHHHHHHHHHHHCCCcEEEEecCCc
Confidence 8999999999999999999988877644
No 465
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=50.98 E-value=71 Score=27.23 Aligned_cols=72 Identities=11% Similarity=0.161 Sum_probs=44.6
Q ss_pred HHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHH-hccCeeccCcccc
Q 020848 63 QAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKK-AGLTAYNHNLDTS 139 (320)
Q Consensus 63 ~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~-aGld~v~i~let~ 139 (320)
+.++.+.+.|+++|+-+|+ .+.. +..++.|-++++.... .+++..-.| ++.+.+..|.+ +|++.+..|-.+.
T Consensus 170 ~Ale~Li~lGvdrILTSG~-~~~a--~~Gl~~Lk~Lv~~a~~-rI~ImaGGG-V~~~Ni~~l~~~tG~~~~H~S~~~~ 242 (287)
T 3iwp_A 170 AALETLLTLGFERVLTSGC-DSSA--LEGLPLIKRLIEQAKG-RIVVMPGGG-ITDRNLQRILEGSGATEFHCSARST 242 (287)
T ss_dssp HHHHHHHHHTCSEEEECTT-SSST--TTTHHHHHHHHHHHTT-SSEEEECTT-CCTTTHHHHHHHHCCSEEEECCEEE
T ss_pred HHHHHHHHcCCCEEECCCC-CCCh--HHhHHHHHHHHHHhCC-CCEEEECCC-cCHHHHHHHHHhhCCCEEeECcCcc
Confidence 3344555569988877654 2221 3456666666665432 366665555 66777777655 8999998886443
No 466
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=50.94 E-value=84 Score=26.06 Aligned_cols=28 Identities=14% Similarity=0.207 Sum_probs=21.3
Q ss_pred ceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 107 MEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 107 ~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
+.+.+..| ++.+.+..+.++|.|.+-.+
T Consensus 196 ~~I~VDGG-I~~~ti~~~~~aGAD~~V~G 223 (246)
T 3inp_A 196 ILLEIDGG-VNPYNIAEIAVCGVNAFVAG 223 (246)
T ss_dssp CEEEEESS-CCTTTHHHHHTTTCCEEEES
T ss_pred eeEEEECC-cCHHHHHHHHHcCCCEEEEe
Confidence 55666655 55788999999999987776
No 467
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=50.93 E-value=6.6 Score=32.04 Aligned_cols=41 Identities=12% Similarity=0.235 Sum_probs=26.3
Q ss_pred HHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 94 QILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 94 ~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
..++.+++++..++++.+..|. +.+.+..+.++|.|.+-++
T Consensus 154 ~~l~~i~~~~~~~~pi~v~GGI-~~~~~~~~~~aGAd~vvvG 194 (218)
T 3jr2_A 154 DDLDKMRQLSALGIELSITGGI-VPEDIYLFEGIKTKTFIAG 194 (218)
T ss_dssp HHHHHHHHHHHTTCEEEEESSC-CGGGGGGGTTSCEEEEEES
T ss_pred HHHHHHHHHhCCCCCEEEECCC-CHHHHHHHHHcCCCEEEEc
Confidence 3444445544445666677675 5777777788888777665
No 468
>3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} SCOP: c.1.7.0
Probab=50.79 E-value=1.2e+02 Score=26.23 Aligned_cols=120 Identities=11% Similarity=0.042 Sum_probs=65.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEeC--------C-------CCCHHH
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTL--------G-------MLEKHQ 120 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~~--------g-------~l~~e~ 120 (320)
.+.++..+.++.+.+.|++.|--. ..+|.-..=+.+-+.++. +...+-+.+-. + ..+.+.
T Consensus 49 ~~~~~~~~~l~~Al~~Gi~~~DTA----~~Yg~G~sE~~lG~al~~-~R~~v~I~TK~g~~~~~~~~~~~~~~~~~~~~~ 123 (348)
T 3n2t_A 49 PDDDNGVRTIHAALDEGINLIDTA----PVYGFGHSEEIVGRALAE-KPNKAHVATKLGLHWVGEDEKNMKVFRDSRPAR 123 (348)
T ss_dssp TTHHHHHHHHHHHHHTTCCEEECC----TTGGGGHHHHHHHHHHHH-SCCCCEEEEEECEEEESSSTTTCEEEECCCHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEECh----hhcCCChHHHHHHHHHhh-CCCeEEEEEeecCCCcCCCcccccccCCCCHHH
Confidence 578899999999999999877321 122211122345555553 22233222111 1 134444
Q ss_pred H-----HHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEe-CCCHHHHHHHHHH
Q 020848 121 A-----IELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL-GEAEEDRVGLLHT 190 (320)
Q Consensus 121 l-----~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl-get~ed~~~~l~~ 190 (320)
+ +-|+++|+|+|-+-+=-. ......+++.+++++.+++.|.- . -+|+ +.+.+++.++++.
T Consensus 124 i~~~~e~SL~rLg~dyiDl~~lH~------p~~~~~~~e~~~al~~l~~~Gki-r---~iGvSn~~~~~l~~~~~~ 189 (348)
T 3n2t_A 124 IRKEVEDSLRRLRVETIDLEQIHW------PDDKTPIDESARELQKLHQDGKI-R---ALGVSNFSPEQMDIFREV 189 (348)
T ss_dssp HHHHHHHHHHHHTCSSEEEEEESS------CCTTSCHHHHHHHHHHHHHTTSE-E---EEEEESCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcEEEEEecC------CCCCCCHHHHHHHHHHHHHhCcc-e---EEecCCCCHHHHHHHHHh
Confidence 3 346677877766532000 01123578889999999998852 2 2444 5566666655543
No 469
>1e4m_M Myrosinase MA1; hydrolase, family 1 glycosyl hydrolase, glucosinolate, TIM B; HET: NAG FUC BMA MAN; 1.2A {Sinapis alba} SCOP: c.1.8.4 PDB: 1e6q_M* 1e6s_M* 1e6x_M* 1e70_M* 1e71_M* 1e72_M* 1e73_M* 1w9b_M* 1w9d_M* 2wxd_M* 1dwa_M* 1dwf_M* 1dwg_M* 1dwh_M* 1dwi_M* 1dwj_M* 1myr_A*
Probab=50.57 E-value=27 Score=32.47 Aligned_cols=56 Identities=11% Similarity=0.013 Sum_probs=42.5
Q ss_pred CHHHHHHHHHhccCeeccCccccHHHHhhhC--CCCC---HHHHHHHHHHHHHcCCeeeeeE
Q 020848 117 EKHQAIELKKAGLTAYNHNLDTSREFYSKII--TTRS---YDERLETLKHVREAGINVCSGG 173 (320)
Q Consensus 117 ~~e~l~~L~~aGld~v~i~let~~~~~~~i~--~~~~---~~~~l~~i~~a~~~Gi~v~~~~ 173 (320)
-++.++.|+++|++.+.+|+ +-.+++..=. ..-+ ++-+-+.|..+++.||.+-+++
T Consensus 79 ~~eDi~lm~~lG~~~~R~si-sWsRi~P~g~~~g~~n~~G~~~y~~~id~l~~~GI~p~vtL 139 (501)
T 1e4m_M 79 WQKDIDVLDELNATGYRFSI-AWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTL 139 (501)
T ss_dssp HHHHHHHHHHHTCSEEEEEC-CHHHHCTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHhCCCeEEccc-cHHhhccCCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 58899999999999999998 3367766531 2223 6777888999999999865554
No 470
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=50.42 E-value=3.3 Score=34.53 Aligned_cols=72 Identities=14% Similarity=0.098 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhh-cCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 60 AVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 60 ei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~-~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
+..+.++.+.+.|+..+.+++-.. .|.. ...=+++++.+++ .++++....|..+.+.++++.++|++.+.++
T Consensus 157 ~~~~~a~~~~~~G~~~i~~t~~~~--~g~~--~g~~~~~~~~i~~~~~iPvia~GGI~~~~d~~~~~~~Gad~v~vg 229 (247)
T 3tdn_A 157 LLRDWVVEVEKRGAGEILLTSIDR--DGTK--SGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLRGADKVSIN 229 (247)
T ss_dssp -----------------------------------------------------------------------------
T ss_pred CHHHHHHHHHhcCCCEEEEecccC--CCCc--CCCCHHHHHHHHHhCCCCEEEECCCCCHHHHHHHHHcCCcHhhcc
Confidence 334445556667888877654211 1111 0111345555553 4677777778888999999999999988876
No 471
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=50.32 E-value=8.7 Score=33.10 Aligned_cols=56 Identities=13% Similarity=0.213 Sum_probs=24.2
Q ss_pred HcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhc-----CceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 70 EAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM-----GMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 70 ~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~-----~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
+.|++.|.+... ..+++.++++.++.. ++.+..+.|. +.+.++.+.++|+|.+.++
T Consensus 217 ~aGaD~I~ld~~---------~~~~l~~~v~~l~~~~~g~~~v~I~ASGGI-t~~ni~~~~~~GvD~i~vG 277 (294)
T 3c2e_A 217 EAGADVIMLDNF---------KGDGLKMCAQSLKNKWNGKKHFLLECSGGL-NLDNLEEYLCDDIDIYSTS 277 (294)
T ss_dssp HHTCSEEECCC------------------------------CCEEEEECCC-CC------CCCSCSEEECG
T ss_pred HcCCCEEEECCC---------CHHHHHHHHHHhcccccCCCCeEEEEECCC-CHHHHHHHHHcCCCEEEEe
Confidence 357766655321 124444445545433 2567777775 9999999999999999886
No 472
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=50.26 E-value=73 Score=28.61 Aligned_cols=84 Identities=14% Similarity=0.097 Sum_probs=44.5
Q ss_pred hhHHHHHHHHHHhhhcCce-EEEeCCCCCHHHHHHHHHhccCeeccCc-ccc---HHHHhhhC------------CCCCH
Q 020848 90 TNFNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKAGLTAYNHNL-DTS---REFYSKII------------TTRSY 152 (320)
Q Consensus 90 ~~~~~l~~~i~~~k~~~~~-i~~~~g~l~~e~l~~L~~aGld~v~i~l-et~---~~~~~~i~------------~~~~~ 152 (320)
...++..++++.+.+.++. +.-....-+.+.+++|++.--.-+.+.. |+. .+..+.+. +-...
T Consensus 221 w~~~~A~~~~~~Le~~~l~~iEeP~~~~d~~~~a~l~~~~~~pi~Ia~gE~~~~~~~~~~li~~~a~dii~~d~~~~GGi 300 (404)
T 3ekg_A 221 LDLNYATRLARGAREYGLKWIEEALPPDDYWGYAELRRNAPTGMMVTTGEHEATRWGFRMLLEMGCCDIIQPDVGWCGGV 300 (404)
T ss_dssp CCHHHHHHHHHHHGGGTCCEEECCSCTTCHHHHHHHHHHSCTTCEEEECTTCCHHHHHHHHHHTTCCSEECCCTTTTTHH
T ss_pred CCHHHHHHHHHHHhhcCCcEEecCCCcccHHHHHHHHHhcCCCeEEEecCccCCHHHHHHHHHcCCCCeEecChhhcCCc
Confidence 3456667777777766665 2222223456777777765211111211 111 11111111 11247
Q ss_pred HHHHHHHHHHHHcCCeeeeeE
Q 020848 153 DERLETLKHVREAGINVCSGG 173 (320)
Q Consensus 153 ~~~l~~i~~a~~~Gi~v~~~~ 173 (320)
...++....|...|+.+.++.
T Consensus 301 tea~kia~lA~a~gv~v~~h~ 321 (404)
T 3ekg_A 301 TELLKISALADAHNALVVPHG 321 (404)
T ss_dssp HHHHHHHHHHHHTTCEECCCC
T ss_pred cHHHHHHHHHHHcCCEEEecC
Confidence 788888888999999876554
No 473
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=50.20 E-value=47 Score=28.68 Aligned_cols=68 Identities=13% Similarity=0.110 Sum_probs=44.0
Q ss_pred HHHHHcCCCEEEEecccCC-CCCCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHhccCeeccC
Q 020848 66 QKAKEAGSTRFCMGAAWRD-TIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 66 ~~~~~~g~~~i~l~~g~~~-~~ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i~ 135 (320)
+.+.+.|++.|.+.|.... ..|.. . ..-+++++.++ ..++++....|..+.+.+.++..+|.+.+.++
T Consensus 132 ~~~~~~GaD~i~v~g~~~GG~~G~~-~-~~~~~~l~~v~~~~~iPviaaGGI~~~~~v~~al~~GAdgV~vG 201 (328)
T 2gjl_A 132 LKAERLGVDAVSIDGFECAGHPGED-D-IPGLVLLPAAANRLRVPIIASGGFADGRGLVAALALGADAINMG 201 (328)
T ss_dssp HHHHHTTCSEEEEECTTCSBCCCSS-C-CCHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHHHcCCCEEEEECCCCCcCCCCc-c-ccHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 3455689999888652111 11210 0 01235556665 34788888888888888888888999998886
No 474
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=50.17 E-value=1.2e+02 Score=26.01 Aligned_cols=169 Identities=9% Similarity=0.007 Sum_probs=97.0
Q ss_pred CCCCHHHHHHHHHhccCeeccCcccc-HHHHhhhCC-CCCHHHHHHHHHHHHHc---CCeeeeeEEEEeCCCHHHHHHHH
Q 020848 114 GMLEKHQAIELKKAGLTAYNHNLDTS-REFYSKIIT-TRSYDERLETLKHVREA---GINVCSGGIIGLGEAEEDRVGLL 188 (320)
Q Consensus 114 g~l~~e~l~~L~~aGld~v~i~let~-~~~~~~i~~-~~~~~~~l~~i~~a~~~---Gi~v~~~~i~Glget~ed~~~~l 188 (320)
+..+.-..+.+.++|++.+.++=++. -..+-.-.. .-++++.+..++...+. .+++.+++-.|.| +.+++.+.+
T Consensus 31 ~a~D~~sA~l~e~aGf~ai~vsG~~~a~s~~G~pD~~~vt~~em~~~~~~i~r~~~~~~PviaD~d~Gyg-~~~~v~~~v 109 (307)
T 3lye_A 31 GVYDGLSARTAMELGFKSLYMTGAGTTASRLGQPDLAIAQLHDMRDNADMIANLDPFGPPLIADMDTGYG-GPIMVARTV 109 (307)
T ss_dssp EECSHHHHHHHHHTTCSCEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHTSSTTSCCEEEECTTCSS-SHHHHHHHH
T ss_pred cCcCHHHHHHHHHcCCCEEEeccHHHHHHhcCCCCCCCCCHHHHHHHHHhhhccCCCCCcEEEECCCCCC-CHHHHHHHH
Confidence 45677788888899999988853333 222221111 24788888888877653 3678888877876 578888999
Q ss_pred HHHhcCCCCCCeeeeeeee-ecCCCCCCCCCCCCHHHHHHHHHHHHHh----CCCceeecCCc-c--cccChh--HHHHH
Q 020848 189 HTLATLPTHPESVPINALL-AVKGTPLQDQKPVEIWEMIRMIATARIV----MPKAMVRLSAG-R--VRFSMP--EQALC 258 (320)
Q Consensus 189 ~~l~~l~~~~~~v~~~~~~-p~~gt~~~~~~~~~~~e~~~~~a~~R~~----~p~~~i~~~~g-~--~~~~~~--~~~~~ 258 (320)
+.+.+.| ..-|.+---. |.....+...+..+.++....+..++.. -++..|..-+. . .++... .....
T Consensus 110 ~~l~~aG--aagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ay 187 (307)
T 3lye_A 110 EHYIRSG--VAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIARTDALQSLGYEECIERLRAA 187 (307)
T ss_dssp HHHHHTT--CCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHHHCHHHHHHHHHHH
T ss_pred HHHHHcC--CeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEechhhhccCHHHHHHHHHHH
Confidence 9888887 5556553222 2111112223456778877777665543 23444432211 1 111111 11233
Q ss_pred HHcCCceEeeCCccccCCCCChhHHHHHHHHcC
Q 020848 259 FLAGANSIFTGEKLLTTPNNDFDADQLMFKVLG 291 (320)
Q Consensus 259 ~~~Gan~~~~~~~~~~~~~~~~~~~~~~i~~~G 291 (320)
..+||+.++... . .+.+++.++.++..
T Consensus 188 ~eAGAD~ifi~~-~-----~~~~~~~~i~~~~~ 214 (307)
T 3lye_A 188 RDEGADVGLLEG-F-----RSKEQAAAAVAALA 214 (307)
T ss_dssp HHTTCSEEEECC-C-----SCHHHHHHHHHHHT
T ss_pred HHCCCCEEEecC-C-----CCHHHHHHHHHHcc
Confidence 678999997753 1 35566666666654
No 475
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=50.15 E-value=61 Score=28.21 Aligned_cols=82 Identities=20% Similarity=0.246 Sum_probs=46.2
Q ss_pred CCCHHHHHHHH-------HHHHHcCCCEEEEeccc---------C------CCCCCc--hhHHHHHHHHHHhhh-cCceE
Q 020848 55 LMTKDAVMQAA-------QKAKEAGSTRFCMGAAW---------R------DTIGRK--TNFNQILEYVKDIRD-MGMEV 109 (320)
Q Consensus 55 ~~s~eei~~~~-------~~~~~~g~~~i~l~~g~---------~------~~~ge~--~~~~~l~~~i~~~k~-~~~~i 109 (320)
.|+.+||.+.+ +.+.+.|++.|-|-++. . .-+|.. .....+.++++++++ .++++
T Consensus 133 ~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv 212 (338)
T 1z41_A 133 EMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPL 212 (338)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcE
Confidence 37777765444 44567899998885542 1 011211 122446777777773 34443
Q ss_pred E--EeCC-----CCC----HHHHHHHHHhccCeeccCc
Q 020848 110 C--CTLG-----MLE----KHQAIELKKAGLTAYNHNL 136 (320)
Q Consensus 110 ~--~~~g-----~l~----~e~l~~L~~aGld~v~i~l 136 (320)
. ++.. -.+ .+.++.|.++|+|.+.++-
T Consensus 213 ~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~ 250 (338)
T 1z41_A 213 FVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSS 250 (338)
T ss_dssp EEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred EEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 2 2221 123 3456777888999888753
No 476
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=50.14 E-value=73 Score=27.12 Aligned_cols=74 Identities=8% Similarity=0.018 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEE-ecccCCCC-CCchhHHHHHHHHHHhhhcCceEEEeCCC-CCHHHHHHHHHhccCeec
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCM-GAAWRDTI-GRKTNFNQILEYVKDIRDMGMEVCCTLGM-LEKHQAIELKKAGLTAYN 133 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l-~~g~~~~~-ge~~~~~~l~~~i~~~k~~~~~i~~~~g~-l~~e~l~~L~~aGld~v~ 133 (320)
+|||..+-++. .|++.+.+ .|..++.+ ++|.+-.++++-|+.. .++++..+.|. ++++.+++..+.|+..|+
T Consensus 156 ~Peea~~Fv~~---TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~--~~vpLVlHGgSG~~~e~i~~ai~~Gv~KiN 230 (286)
T 1gvf_A 156 DPQEAKRFVEL---TGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREV--VDVPLVLHGASDVPDEFVRRTIELGVTKVN 230 (286)
T ss_dssp CHHHHHHHHHH---HCCSEEEECSSCCSSCCSSCCCCCHHHHHHHHHH--CCSCEEECCCTTCCHHHHHHHHHTTEEEEE
T ss_pred CHHHHHHHHHH---HCCCEEEeecCccccCcCCCCccCHHHHHHHHHh--cCCCEEEECCCCCCHHHHHHHHHCCCeEEE
Q ss_pred cC
Q 020848 134 HN 135 (320)
Q Consensus 134 i~ 135 (320)
++
T Consensus 231 i~ 232 (286)
T 1gvf_A 231 VA 232 (286)
T ss_dssp EC
T ss_pred EC
No 477
>2j78_A Beta-glucosidase A; family 1, hydrolase, inhibitor, glycosidase, polysaccharide degradation, transition state mimic, carbohydrate metabolism; HET: GOX; 1.65A {Thermotoga maritima} SCOP: c.1.8.4 PDB: 1oif_A* 1oim_A* 1oin_A* 1od0_A* 1w3j_A* 1uz1_A* 2cbv_A* 2ces_A* 2cet_A* 2j75_A* 2j77_A* 2cbu_A* 2j79_A* 2j7b_A* 2j7c_A* 2j7d_A* 2j7e_A* 2j7f_A* 2j7g_A* 2j7h_A* ...
Probab=50.08 E-value=32 Score=31.72 Aligned_cols=56 Identities=16% Similarity=0.115 Sum_probs=41.2
Q ss_pred CHHHHHHHHHhccCeeccCccccHHHHhhhCCCCC---HHHHHHHHHHHHHcCCeeeeeE
Q 020848 117 EKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRS---YDERLETLKHVREAGINVCSGG 173 (320)
Q Consensus 117 ~~e~l~~L~~aGld~v~i~let~~~~~~~i~~~~~---~~~~l~~i~~a~~~Gi~v~~~~ 173 (320)
.++.++.|+++|++.+.+++ +-.+++..-...-+ ++.+-+.|+.+++.||.+-+++
T Consensus 83 ~~eDi~lm~~~G~~~~R~si-~W~Ri~P~G~g~~n~~gl~~yd~lid~l~~~GI~pivtL 141 (468)
T 2j78_A 83 WKEDIEIIEKLGVKAYRFSI-SWPRILPEGTGRVNQKGLDFYNRIIDTLLEKGITPFVTI 141 (468)
T ss_dssp HHHHHHHHHHTTCCEEEEEC-CHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHcCCCEEEecc-CHHHhCCCCCCCcCHHHHHHHHHHHHHHHhcCCEEEEEc
Confidence 48899999999999999988 22566554111223 3667888899999999866655
No 478
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=50.05 E-value=34 Score=28.83 Aligned_cols=111 Identities=11% Similarity=0.034 Sum_probs=64.1
Q ss_pred CCCCHHHHHHHHHHHHHcCCC-EEEEecccCCCCCCchhHHHHHHHHHHhhhcCce-EEEeCCCCCHHHHHHHHHhccCe
Q 020848 54 KLMTKDAVMQAAQKAKEAGST-RFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKAGLTA 131 (320)
Q Consensus 54 ~~~s~eei~~~~~~~~~~g~~-~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~-i~~~~g~l~~e~l~~L~~aGld~ 131 (320)
...+.+|++..++.+... .+ .+.+.. .+.++-. ..++.++.+.++-+.|.. +.+..|.--.+.++.+.++|+..
T Consensus 58 ~~vtldemi~h~~aV~r~-~~~~~vvaD--~pfgsy~-~~~~a~~~a~rl~kaGa~aVklEgg~e~~~~I~al~~agipV 133 (264)
T 1m3u_A 58 LPVTVADIAYHTAAVRRG-APNCLLLAD--LPFMAYA-TPEQAFENAATVMRAGANMVKIEGGEWLVETVQMLTERAVPV 133 (264)
T ss_dssp TTCCHHHHHHHHHHHHHH-CTTSEEEEE--CCTTSSS-SHHHHHHHHHHHHHTTCSEEECCCSGGGHHHHHHHHHTTCCE
T ss_pred CCcCHHHHHHHHHHHHhh-CCCCcEEEE--CCCCCcC-CHHHHHHHHHHHHHcCCCEEEECCcHHHHHHHHHHHHCCCCe
Confidence 348999999888876543 33 233322 2332211 334555544444345554 33444545688999999999875
Q ss_pred ec---cCccccH--HHHhhhCCCC-CHHHHHHHHHHHHHcCCe
Q 020848 132 YN---HNLDTSR--EFYSKIITTR-SYDERLETLKHVREAGIN 168 (320)
Q Consensus 132 v~---i~let~~--~~~~~i~~~~-~~~~~l~~i~~a~~~Gi~ 168 (320)
+. +.-++.. .-|....+.. ..++.++-.+.+.++|-.
T Consensus 134 ~gHiGLtPq~v~~~ggf~v~grt~~~a~~~i~rA~a~~eAGA~ 176 (264)
T 1m3u_A 134 CGHLGLTPQSVNIFGGYKVQGRGDEAGDQLLSDALALEAAGAQ 176 (264)
T ss_dssp EEEEESCGGGHHHHTSSCCCCCSHHHHHHHHHHHHHHHHHTCC
T ss_pred EeeecCCceeecccCCeEEEeCCHHHHHHHHHHHHHHHHCCCc
Confidence 52 2334431 1233333322 358889999999999976
No 479
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=49.96 E-value=1.2e+02 Score=25.82 Aligned_cols=103 Identities=13% Similarity=0.070 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEE-ecccCCCC-CCchhHHHHHHHHHHhhhcCceEEEeCCC-CCHHHHHHHHHhccCeec
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCM-GAAWRDTI-GRKTNFNQILEYVKDIRDMGMEVCCTLGM-LEKHQAIELKKAGLTAYN 133 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l-~~g~~~~~-ge~~~~~~l~~~i~~~k~~~~~i~~~~g~-l~~e~l~~L~~aGld~v~ 133 (320)
+|||..+-++. .|++.+.+ .|..++.+ ++|.+--++++-|+..- ++++..+.|. ++++.+++..+.|+..|+
T Consensus 160 ~Peea~~Fv~~---TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~v--~vpLVlHGgSG~~~e~i~~ai~~Gv~KiN 234 (288)
T 3q94_A 160 DPAECKHLVEA---TGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFT--GVPLVLHGGTGIPTADIEKAISLGTSKIN 234 (288)
T ss_dssp CHHHHHHHHHH---HCCSEEEECSSCBSSCCSSSCCCCHHHHHHHHHHH--CSCEEECCCTTCCHHHHHHHHHTTEEEEE
T ss_pred CHHHHHHHHHH---HCCCEEEEEcCcccCCcCCCCccCHHHHHHHHHhc--CCCEEEeCCCCCCHHHHHHHHHcCCeEEE
Q ss_pred cC-------ccccHHHHhhhCCCCCHHHHHHHHHHHHH
Q 020848 134 HN-------LDTSREFYSKIITTRSYDERLETLKHVRE 164 (320)
Q Consensus 134 i~-------let~~~~~~~i~~~~~~~~~l~~i~~a~~ 164 (320)
++ .+..++.+..-....++.+++...+.+.+
T Consensus 235 i~Tdl~~a~~~~~r~~~~~~~~~~dpr~~~~~~~~a~~ 272 (288)
T 3q94_A 235 VNTENQIEFTKAVREVLNKDQEVYDPRKFIGPGRDAIK 272 (288)
T ss_dssp ECHHHHHHHHHHHHHHHHHCSSCCCTHHHHHHHHHHHH
T ss_pred EChHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHHHHH
No 480
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=49.77 E-value=9 Score=35.76 Aligned_cols=28 Identities=11% Similarity=0.168 Sum_probs=25.8
Q ss_pred CCHHHHHHHHHHHHHcCCeeeeeEEEEe
Q 020848 150 RSYDERLETLKHVREAGINVCSGGIIGL 177 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl 177 (320)
.+.++..+.++.|++.||+|-+++++.+
T Consensus 77 Gt~~dfk~Lv~~aH~~Gi~VilD~V~NH 104 (549)
T 4aie_A 77 GTMADMDELISKAKEHHIKIVMDLVVNH 104 (549)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCSB
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECccC
Confidence 4788999999999999999999999987
No 481
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=49.55 E-value=74 Score=27.90 Aligned_cols=80 Identities=15% Similarity=-0.035 Sum_probs=52.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEe---------cccCC-------CCC--CchhHHHHHHHHHHhhh-c--CceEEEeCC
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMG---------AAWRD-------TIG--RKTNFNQILEYVKDIRD-M--GMEVCCTLG 114 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~---------~g~~~-------~~g--e~~~~~~l~~~i~~~k~-~--~~~i~~~~g 114 (320)
++.+++.+.++.+...++.-+.-. ..... .+| .+...+.-++.++.+++ . .+++..+.|
T Consensus 204 ~~~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipIIg~GG 283 (345)
T 3oix_A 204 FDIVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQIIGTGG 283 (345)
T ss_dssp CCHHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEEEEESS
T ss_pred CCHHHHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCcEEEECC
Confidence 567788777776666666543211 00000 011 03345555788888884 4 588889999
Q ss_pred CCCHHHHHHHHHhccCeeccC
Q 020848 115 MLEKHQAIELKKAGLTAYNHN 135 (320)
Q Consensus 115 ~l~~e~l~~L~~aGld~v~i~ 135 (320)
..+.+.+.++..+|.|.|.++
T Consensus 284 I~s~~da~~~l~aGAd~V~ig 304 (345)
T 3oix_A 284 VXTGRDAFEHILCGASMVQIG 304 (345)
T ss_dssp CCSHHHHHHHHHHTCSEEEES
T ss_pred CCChHHHHHHHHhCCCEEEEC
Confidence 999999888888999999886
No 482
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=49.50 E-value=7.3 Score=35.67 Aligned_cols=28 Identities=14% Similarity=0.264 Sum_probs=25.9
Q ss_pred CCHHHHHHHHHHHHHcCCeeeeeEEEEe
Q 020848 150 RSYDERLETLKHVREAGINVCSGGIIGL 177 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl 177 (320)
.+.++..+.++.|++.||+|-+++++.+
T Consensus 74 Gt~~df~~lv~~aH~~Gi~VilD~V~NH 101 (496)
T 4gqr_A 74 GNEDEFRNMVTRCNNVGVRIYVDAVINH 101 (496)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEECCSE
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEccCc
Confidence 4889999999999999999999999977
No 483
>3f5l_A Beta-glucosidase; beta-alpha-barrels, glycosidase, hydrolase; HET: LB2 MES; 1.37A {Oryza sativa japonica group} PDB: 3aht_A* 3ahv_A* 3f5i_A* 3f5j_A* 3f5k_A* 3f4v_A* 2rgm_A* 2rgl_A* 3scr_A* 3scs_A* 3scp_A* 3scq_A* 3scu_A* 3scn_A* 3sco_A* 3sct_A* 3scv_A* 3scw_A*
Probab=49.39 E-value=27 Score=32.27 Aligned_cols=56 Identities=11% Similarity=0.064 Sum_probs=42.0
Q ss_pred CHHHHHHHHHhccCeeccCccccHHHHhhhCCCCC---HHHHHHHHHHHHHcCCeeeeeE
Q 020848 117 EKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRS---YDERLETLKHVREAGINVCSGG 173 (320)
Q Consensus 117 ~~e~l~~L~~aGld~v~i~let~~~~~~~i~~~~~---~~~~l~~i~~a~~~Gi~v~~~~ 173 (320)
-+|.++.|+++|++.+.+|+ +-.+++..-...-+ ++-+-+.|+.+++.||..-+++
T Consensus 75 ykeDi~lm~elG~~~yRfsI-sWsRI~P~g~g~~n~~Gl~~Y~~lid~l~~~GI~P~vTL 133 (481)
T 3f5l_A 75 YKEDVNLMKSLNFDAYRFSI-SWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNL 133 (481)
T ss_dssp HHHHHHHHHHTTCCEEEEEC-CHHHHCTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHHHcCCCEEEecC-cHHHhCcCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 58999999999999999998 22677665212234 6677888999999999865543
No 484
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=49.35 E-value=10 Score=34.78 Aligned_cols=75 Identities=12% Similarity=0.164 Sum_probs=45.1
Q ss_pred hHHHHHHHHHHhhhcCce-EEEeCCCCCHHHHHHHHHhccCeeccCccccHHHHhhhCC-CCCHHHHHHHHHHHHHcCCe
Q 020848 91 NFNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKAGLTAYNHNLDTSREFYSKIIT-TRSYDERLETLKHVREAGIN 168 (320)
Q Consensus 91 ~~~~l~~~i~~~k~~~~~-i~~~~g~l~~e~l~~L~~aGld~v~i~let~~~~~~~i~~-~~~~~~~l~~i~~a~~~Gi~ 168 (320)
.+..+.+.+..++++|+. |.+++-.-.. ...|-+.... ..+.+ -.+.++..+.++.|++.||+
T Consensus 48 ~~~gi~~~LdyL~~LGv~~I~l~Pi~~~~------~~~gY~~~dy---------~~idp~~Gt~~df~~lv~~~h~~Gi~ 112 (475)
T 2z1k_A 48 TLWGVAEKLPYLLDLGVEAIYLNPVFAST------ANHRYHTVDY---------FQVDPILGGNEALRHLLEVAHAHGVR 112 (475)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEEES------STTCCSEEEE---------EEECGGGTCHHHHHHHHHHHHHTTCE
T ss_pred CHHHHHHHhHHHHHcCCCEEEECCCcCCC------CCCCcCCCCc---------CccCcccCCHHHHHHHHHHHHHCCCE
Confidence 456777777788877765 3443321000 0123222211 11111 14678889999999999999
Q ss_pred eeeeEEEEe-CCC
Q 020848 169 VCSGGIIGL-GEA 180 (320)
Q Consensus 169 v~~~~i~Gl-get 180 (320)
|-+++++.+ +..
T Consensus 113 VilD~V~NH~~~~ 125 (475)
T 2z1k_A 113 VILDGVFNHTGRG 125 (475)
T ss_dssp EEEEECCSBCCTT
T ss_pred EEEEEecccccCC
Confidence 999999988 543
No 485
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=49.23 E-value=1.4e+02 Score=26.26 Aligned_cols=126 Identities=13% Similarity=0.057 Sum_probs=75.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCCCC--C-CchhHHHHHHHHHHhhhcCceEEEeCCCCCHHHHHHHHHhccCeec
Q 020848 57 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTI--G-RKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYN 133 (320)
Q Consensus 57 s~eei~~~~~~~~~~g~~~i~l~~g~~~~~--g-e~~~~~~l~~~i~~~k~~~~~i~~~~g~l~~e~l~~L~~aGld~v~ 133 (320)
+.+.+++.++.+++.|.+-+-++.--+.+. + ....-+.+..+.+..++.|+++.++ .++.+.++.+.+. +|.+.
T Consensus 118 s~e~a~~~a~~~k~aGa~~vr~q~fKprTs~~~f~glg~egl~~l~~~~~e~Gl~~~te--~~d~~~~~~l~~~-vd~lk 194 (350)
T 1vr6_A 118 GREMLMETAHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADKYGMYVVTE--ALGEDDLPKVAEY-ADIIQ 194 (350)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHHHTCEEEEE--CSSGGGHHHHHHH-CSEEE
T ss_pred CHHHHHHHHHHHHHcCCCeeeeeEEeCCCChHhhcCCCHHHHHHHHHHHHHcCCcEEEE--eCCHHHHHHHHHh-CCEEE
Confidence 789999999999999988766653221111 0 0012233433333344779987665 3677788888888 88888
Q ss_pred cCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeee
Q 020848 134 HNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPI 203 (320)
Q Consensus 134 i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~ 203 (320)
|+--.. .++ ..++.+.+.|.++. +=-|..-+.+|+...++.+..-| ...+.+
T Consensus 195 IgAr~~----------~n~----~LL~~va~~~kPVi--lk~G~~~tl~ei~~Ave~i~~~G--N~~viL 246 (350)
T 1vr6_A 195 IGARNA----------QNF----RLLSKAGSYNKPVL--LKRGFMNTIEEFLLSAEYIANSG--NTKIIL 246 (350)
T ss_dssp ECGGGT----------TCH----HHHHHHHTTCSCEE--EECCTTCCHHHHHHHHHHHHHTT--CCCEEE
T ss_pred ECcccc----------cCH----HHHHHHHccCCcEE--EcCCCCCCHHHHHHHHHHHHHCC--CCeEEE
Confidence 864221 122 23444445555441 11222348899999999999887 334444
No 486
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=48.84 E-value=23 Score=32.15 Aligned_cols=43 Identities=12% Similarity=-0.073 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 151 SYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 151 ~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
.....++....|...|+.+.++.. ..++.=-+...+.+...++
T Consensus 315 Git~~~~ia~~A~~~gi~v~~h~~--~~~s~i~~aa~~hlaaa~p 357 (426)
T 4e4f_A 315 GITGMRRIADFASLYQVRTGSHGP--SDLSPICMAAALHFDLWVP 357 (426)
T ss_dssp HHHHHHHHHHHHHTTTCEEEECCC--TTSCHHHHHHHHHHHHHCT
T ss_pred CHHHHHHHHHHHHHcCCEEeeeCC--CCccHHHHHHHHHHHHhCC
Confidence 467778888888888887644321 1235444555565555553
No 487
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=48.80 E-value=1.2e+02 Score=25.32 Aligned_cols=65 Identities=11% Similarity=0.190 Sum_probs=40.9
Q ss_pred HHHHHHHHHHhhhc-CceEEEeCCCCCHHHHHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHH
Q 020848 92 FNQILEYVKDIRDM-GMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHV 162 (320)
Q Consensus 92 ~~~l~~~i~~~k~~-~~~i~~~~g~l~~e~l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a 162 (320)
.+.+.++++++|+. +.++.+--|.-+.+.++.+.+ +.|.+-++= .+.+.+. .++.++.++.++.+
T Consensus 184 ~~~~~~~v~~vr~~~~~Pv~vGfGIst~e~a~~~~~-~ADGVIVGS----AiVk~i~-~~~~~~~~~~~~~~ 249 (252)
T 3tha_A 184 EAILQDKVKEIRSFTNLPIFVGFGIQNNQDVKRMRK-VADGVIVGT----SIVKCFK-QGNLDIIMKDIEEI 249 (252)
T ss_dssp HHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHTT-TSSEEEECH----HHHHHTT-SSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCcEEEEcCcCCHHHHHHHHh-cCCEEEECH----HHHHHHH-hcCHHHHHHHHHHH
Confidence 35577788888753 667777778888888888866 477776652 2233332 23555555555544
No 488
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=48.73 E-value=18 Score=32.94 Aligned_cols=28 Identities=11% Similarity=0.292 Sum_probs=25.8
Q ss_pred CCHHHHHHHHHHHHHcCCeeeeeEEEEe
Q 020848 150 RSYDERLETLKHVREAGINVCSGGIIGL 177 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl 177 (320)
.+.++..+.++.|++.||+|-+++++.+
T Consensus 62 Gt~~dfk~Lv~~aH~~Gi~VilD~V~NH 89 (448)
T 1g94_A 62 GNRAQFIDMVNRCSAAGVDIYVDTLINH 89 (448)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEEECSE
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEeecc
Confidence 4788999999999999999999999987
No 489
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=48.68 E-value=46 Score=26.40 Aligned_cols=70 Identities=19% Similarity=0.280 Sum_probs=41.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCC----CCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHhccC
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTI----GRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAGLT 130 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~----ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~aGld 130 (320)
.+++++. .+...|++.+.+.+.. ++. +.+..++ .++.++ ..++++....|.- .+.+.++.++|.+
T Consensus 116 ~t~~e~~----~~~~~g~d~i~~~~~~-~~~~~~~~~~~~~~----~l~~l~~~~~~pvia~GGI~-~~nv~~~~~~Ga~ 185 (215)
T 1xi3_A 116 YSLEEAL----EAEKKGADYLGAGSVF-PTKTKEDARVIGLE----GLRKIVESVKIPVVAIGGIN-KDNAREVLKTGVD 185 (215)
T ss_dssp SSHHHHH----HHHHHTCSEEEEECSS-CC----CCCCCHHH----HHHHHHHHCSSCEEEESSCC-TTTHHHHHTTTCS
T ss_pred CCHHHHH----HHHhcCCCEEEEcCCc-cCCCCCCCCCcCHH----HHHHHHHhCCCCEEEECCcC-HHHHHHHHHcCCC
Confidence 3556643 3345789888774311 111 1222333 334444 2367777776654 8888899999999
Q ss_pred eeccC
Q 020848 131 AYNHN 135 (320)
Q Consensus 131 ~v~i~ 135 (320)
.+.++
T Consensus 186 gv~vg 190 (215)
T 1xi3_A 186 GIAVI 190 (215)
T ss_dssp EEEES
T ss_pred EEEEh
Confidence 98876
No 490
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=48.67 E-value=73 Score=33.01 Aligned_cols=78 Identities=15% Similarity=0.154 Sum_probs=47.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhh-hcCc--eEEEeC--CCCCHHHHHHHHHhccC
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGM--EVCCTL--GMLEKHQAIELKKAGLT 130 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k-~~~~--~i~~~~--g~l~~e~l~~L~~aGld 130 (320)
.+++.+++.++.+.+.|++.|+|.. +.| -..-..+.++++.++ ..++ .++.++ |+-....+.. .++|++
T Consensus 706 ~~~~~~~~~~~~~~~~Ga~~i~l~D----T~G-~~~P~~~~~lv~~l~~~~~~~i~~H~Hnd~GlAvAn~laA-v~aGa~ 779 (1165)
T 2qf7_A 706 YDLKYYTNLAVELEKAGAHIIAVKD----MAG-LLKPAAAKVLFKALREATGLPIHFHTHDTSGIAAATVLAA-VEAGVD 779 (1165)
T ss_dssp GCHHHHHHHHHHHHHTTCSEEEEEE----TTC-CCCHHHHHHHHHHHHHHCSSCEEEEECBTTSCHHHHHHHH-HHTTCS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeC----ccC-CcCHHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH-HHhCCC
Confidence 4678888888888889998888853 112 112244555555555 2333 344444 4333444443 468999
Q ss_pred eeccCcccc
Q 020848 131 AYNHNLDTS 139 (320)
Q Consensus 131 ~v~i~let~ 139 (320)
.|..++.+.
T Consensus 780 ~vd~ti~Gl 788 (1165)
T 2qf7_A 780 AVDAAMDAL 788 (1165)
T ss_dssp EEEEBCGGG
T ss_pred EEEeccccc
Confidence 888777654
No 491
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=48.51 E-value=77 Score=27.53 Aligned_cols=69 Identities=13% Similarity=0.067 Sum_probs=43.5
Q ss_pred HHHHHHHcCCCEEEEeccc-CCC-------CCCchhHHHHHHHHHHhh-hcCceEEEeCCCCCHHHHHHHHHhccCeecc
Q 020848 64 AAQKAKEAGSTRFCMGAAW-RDT-------IGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAGLTAYNH 134 (320)
Q Consensus 64 ~~~~~~~~g~~~i~l~~g~-~~~-------~ge~~~~~~l~~~i~~~k-~~~~~i~~~~g~l~~e~l~~L~~aGld~v~i 134 (320)
.++.+.+.|++.|.+++++ +.. .+.|.+ -++.+..++ ..++++..+.|..+...+.+...+|.+.|.+
T Consensus 162 ~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~---~~~~l~~v~~~~~ipVIa~GGI~~g~Dv~kalalGAdaV~i 238 (336)
T 1ypf_A 162 AVRELENAGADATKVGIGPGKVCITKIKTGFGTGGW---QLAALRWCAKAASKPIIADGGIRTNGDVAKSIRFGATMVMI 238 (336)
T ss_dssp HHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTC---HHHHHHHHHHTCSSCEEEESCCCSTHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHcCCCEEEEecCCCceeecccccCcCCchh---HHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCCEEEe
Confidence 3455567899998885321 100 010100 234444544 3478888999998877777777899999988
Q ss_pred C
Q 020848 135 N 135 (320)
Q Consensus 135 ~ 135 (320)
+
T Consensus 239 G 239 (336)
T 1ypf_A 239 G 239 (336)
T ss_dssp S
T ss_pred C
Confidence 6
No 492
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=48.44 E-value=1.5e+02 Score=26.47 Aligned_cols=44 Identities=9% Similarity=0.108 Sum_probs=30.4
Q ss_pred CCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHHHHHHHhcCC
Q 020848 150 RSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 195 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 195 (320)
......++.+..+++.|+.+.++.. ..++.-.....+.++..++
T Consensus 336 GGit~a~~i~~~A~~~gi~~~~~~~--~~es~i~~~a~~hlaaa~~ 379 (413)
T 1kcz_A 336 GGVNNIADAIMYCKANGMGAYCGGT--CNETNRSAEVTTNIGMACG 379 (413)
T ss_dssp SSTHHHHHHHHHHHHTTCEEEECCC--TTSCHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHcCCEEEecCC--CCCCHHHHHHHHHHHhcCC
Confidence 3567778999999999988644321 2477777777666666654
No 493
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=48.37 E-value=73 Score=32.97 Aligned_cols=79 Identities=9% Similarity=0.091 Sum_probs=51.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhh-cCce--EEEeCCC-CCHHHHHHHHHhccCe
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGME--VCCTLGM-LEKHQAIELKKAGLTA 131 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~-~~~~--i~~~~g~-l~~e~l~~L~~aGld~ 131 (320)
.+++.+++.++.+.+.|+..|+|.. +.| -..-..+.++++.+++ .+++ ++.++.. +-....-.-.++|++.
T Consensus 689 ~~~~~~~~~a~~~~~~Ga~~i~l~D----t~G-~~~P~~~~~lv~~l~~~~~~~i~~H~Hnt~G~a~An~laA~~aGa~~ 763 (1150)
T 3hbl_A 689 YTLEYYVKLAKELEREGFHILAIKD----MAG-LLKPKAAYELIGELKSAVDLPIHLHTHDTSGNGLLTYKQAIDAGVDI 763 (1150)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEE----TTC-CCCHHHHHHHHHHHHHHCCSCEEEEECBTTSCHHHHHHHHHHTTCSE
T ss_pred CCHHHHHHHHHHHHHcCCCeeeEcC----ccC-CCCHHHHHHHHHHHHHhcCCeEEEEeCCCCcHHHHHHHHHHHhCCCE
Confidence 6789999999999999999999953 112 1222456666666663 3443 4454432 3333344445789999
Q ss_pred eccCcccc
Q 020848 132 YNHNLDTS 139 (320)
Q Consensus 132 v~i~let~ 139 (320)
|..++.+.
T Consensus 764 vD~ai~Gl 771 (1150)
T 3hbl_A 764 IDTAVASM 771 (1150)
T ss_dssp EEEBCGGG
T ss_pred EEEecccc
Confidence 98887665
No 494
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=48.34 E-value=1.4e+02 Score=26.25 Aligned_cols=169 Identities=11% Similarity=-0.020 Sum_probs=81.0
Q ss_pred HHHHHHHHHhc--cCeeccCcccc-HHHHhhhCCCCCHHHHHHHHHHHHH-----cCCeeeeeEEEEeCCCHHHHHHHHH
Q 020848 118 KHQAIELKKAG--LTAYNHNLDTS-REFYSKIITTRSYDERLETLKHVRE-----AGINVCSGGIIGLGEAEEDRVGLLH 189 (320)
Q Consensus 118 ~e~l~~L~~aG--ld~v~i~let~-~~~~~~i~~~~~~~~~l~~i~~a~~-----~Gi~v~~~~i~Glget~ed~~~~l~ 189 (320)
++.++.++.++ .|.+.+++-.. ..-+..+.......+.+++++.+++ ..+++.+-+- .+.+.+++.++.+
T Consensus 164 ~dy~~~~~~~~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~--p~~~~~~~~~ia~ 241 (367)
T 3zwt_A 164 EDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIA--PDLTSQDKEDIAS 241 (367)
T ss_dssp HHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEEC--SCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeC--CCCCHHHHHHHHH
Confidence 33344344443 77777766443 1111222111223455555555432 2344444432 2557788999999
Q ss_pred HHhcCCCCCCeeeeeeeee-cCCC---CCCC----CC-CCCHHHHHHHHHHHHHhCCC-ceeecCCcccccChhHHHHHH
Q 020848 190 TLATLPTHPESVPINALLA-VKGT---PLQD----QK-PVEIWEMIRMIATARIVMPK-AMVRLSAGRVRFSMPEQALCF 259 (320)
Q Consensus 190 ~l~~l~~~~~~v~~~~~~p-~~gt---~~~~----~~-~~~~~e~~~~~a~~R~~~p~-~~i~~~~g~~~~~~~~~~~~~ 259 (320)
.+.+.| ++.+.+..-.. .+++ .+.. .. ++.....++++...+...+. ..+-..+|-. ........+
T Consensus 242 ~~~~aG--adgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~--s~~da~~~l 317 (367)
T 3zwt_A 242 VVKELG--IDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVS--SGQDALEKI 317 (367)
T ss_dssp HHHHHT--CCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCC--SHHHHHHHH
T ss_pred HHHHcC--CCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCC--CHHHHHHHH
Confidence 999988 66666542211 1111 0110 00 11122334556555555643 2222223211 233445677
Q ss_pred HcCCceEeeCCccccCCCCC-----hhHHHHHHHHcCCC
Q 020848 260 LAGANSIFTGEKLLTTPNND-----FDADQLMFKVLGLT 293 (320)
Q Consensus 260 ~~Gan~~~~~~~~~~~~~~~-----~~~~~~~i~~~G~~ 293 (320)
.+||+.++.+..++.. ++. .+++.+.+.+.|+.
T Consensus 318 ~~GAd~V~vgra~l~~-gP~~~~~i~~~l~~~m~~~G~~ 355 (367)
T 3zwt_A 318 RAGASLVQLYTALTFW-GPPVVGKVKRELEALLKEQGFG 355 (367)
T ss_dssp HHTCSEEEESHHHHHH-CTHHHHHHHHHHHHHHHHTTCS
T ss_pred HcCCCEEEECHHHHhc-CcHHHHHHHHHHHHHHHHcCCC
Confidence 7899999887654321 221 23334555566764
No 495
>2i9e_A Triosephosphate isomerase; 2.00A {Tenebrio molitor}
Probab=48.13 E-value=1.2e+02 Score=25.35 Aligned_cols=134 Identities=20% Similarity=0.163 Sum_probs=76.3
Q ss_pred HHHHHHhccCeeccCccccHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeeeEEEEeCCCHHHHHH----------HHHH
Q 020848 121 AIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVG----------LLHT 190 (320)
Q Consensus 121 l~~L~~aGld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~----------~l~~ 190 (320)
...|+++|++++-++- .-++.+. +.+-+.+-+.++.+.+.|+.+ |+-.||+.++... +-..
T Consensus 79 ~~mL~d~G~~~ViiGH----SERR~~f-~Etd~~v~~Kv~~Al~~GL~p----IvCvGEtleere~g~t~~vv~~Ql~~~ 149 (259)
T 2i9e_A 79 PAMIKDVGADWVILGH----SERRQIF-GESDELIAEKVCHALESGLKV----IACIGETLEEREAGKTEEVVFRQTKAI 149 (259)
T ss_dssp HHHHHHTTCCEEEESC----HHHHHTS-CCCHHHHHHHHHHHHHTTCEE----EEEECCCHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECc----hhhhhhc-CCCHHHHHHHHHHHHHCCCeE----EEEcCCcHHHHhcCCHHHHHHHHHHHH
Confidence 4667888999998875 1122221 457778888899999999865 5556888775322 1111
Q ss_pred HhcCCCCCCeeeeeeeeecC--CCCCCCCCCCCHHHHHHHHHHHHHhCCC-------ceeec-CCcccccChhHHHHHHH
Q 020848 191 LATLPTHPESVPINALLAVK--GTPLQDQKPVEIWEMIRMIATARIVMPK-------AMVRL-SAGRVRFSMPEQALCFL 260 (320)
Q Consensus 191 l~~l~~~~~~v~~~~~~p~~--gt~~~~~~~~~~~e~~~~~a~~R~~~p~-------~~i~~-~~g~~~~~~~~~~~~~~ 260 (320)
+..+. ....+ +..|-|+= ||. ...++++...+.+..|..+.. ..+++ -+|-++- .+.....-.
T Consensus 150 l~~~~-~~~~~-vIAYEPvWAIGTG----~~Atpe~aqevh~~IR~~l~~~~~~~va~~vrIlYGGSV~~-~N~~~l~~~ 222 (259)
T 2i9e_A 150 AAKVN-DWSNV-VIAYEPVWAIGTG----KTATPQQAQDVHKALRQWICENIDAKVGNSIRIQYGGSVTA-ANCKELASQ 222 (259)
T ss_dssp HHHCS-CCTTE-EEEECCGGGTTSS----SCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCEEEECSCCCT-TTHHHHHTS
T ss_pred Hhcch-hhcCE-EEEEcCHHHcCCC----CCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCCCH-hhHHHHhcC
Confidence 22221 11222 45666643 665 346788888888877755421 11232 1222221 222344455
Q ss_pred cCCceEeeCC
Q 020848 261 AGANSIFTGE 270 (320)
Q Consensus 261 ~Gan~~~~~~ 270 (320)
.+++.++.|.
T Consensus 223 ~diDG~LVGg 232 (259)
T 2i9e_A 223 PDIDGFLVGG 232 (259)
T ss_dssp TTCCEEEESG
T ss_pred CCCCeeeech
Confidence 7888887775
No 496
>1gnx_A Beta-glucosidase; hydrolase, glycosyltransferase, family 1 of glycosyl hydrolase; HET: SUC; 1.68A {Streptomyces SP} SCOP: c.1.8.4 PDB: 1gon_A
Probab=48.13 E-value=39 Score=31.18 Aligned_cols=56 Identities=14% Similarity=0.092 Sum_probs=42.4
Q ss_pred CHHHHHHHHHhccCeeccCccccHHHHhhhCCC---CCHHHHHHHHHHHHHcCCeeeeeE
Q 020848 117 EKHQAIELKKAGLTAYNHNLDTSREFYSKIITT---RSYDERLETLKHVREAGINVCSGG 173 (320)
Q Consensus 117 ~~e~l~~L~~aGld~v~i~let~~~~~~~i~~~---~~~~~~l~~i~~a~~~Gi~v~~~~ 173 (320)
-++.++.|+++|++.+.+|+ +-.+++..-... ..++.+-+.|+.+++.||..-+++
T Consensus 73 y~eDi~lm~~lG~~~yRfsI-sWsRI~P~g~g~~n~~gl~~Y~~lid~l~~~GI~p~vtL 131 (479)
T 1gnx_A 73 WREDVALMAELGLGAYRFSL-AWPRIQPTGRGPALQKGLDFYRRLADELLAKGIQPVATL 131 (479)
T ss_dssp HHHHHHHHHHTTCSEEEEEC-CHHHHSGGGSSSCCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHcCCCEEEecc-cHHHhccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 48899999999999999998 326776653111 136777888999999999865554
No 497
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=48.11 E-value=98 Score=27.45 Aligned_cols=168 Identities=13% Similarity=0.036 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhhcCceEEEeCCC-CCHHHHHHHHHhccCeeccCcccc-HHHHhhhCCCCCHHHHHHHHHHHHHcCCeee
Q 020848 93 NQILEYVKDIRDMGMEVCCTLGM-LEKHQAIELKKAGLTAYNHNLDTS-REFYSKIITTRSYDERLETLKHVREAGINVC 170 (320)
Q Consensus 93 ~~l~~~i~~~k~~~~~i~~~~g~-l~~e~l~~L~~aGld~v~i~let~-~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~ 170 (320)
+.+.++++++++.++.+.+..+. ...+..+.+.++|+|.+.+..... .+ ...+..+|+++.+..+.. ++++.
T Consensus 142 ~~~~~~i~~~~~~g~~v~~~v~~~~~~e~a~~~~~agad~i~i~~~~~~~~---~~~~~~~~~~i~~l~~~~---~~pvi 215 (393)
T 2qr6_A 142 ELLSERIAQVRDSGEIVAVRVSPQNVREIAPIVIKAGADLLVIQGTLISAE---HVNTGGEALNLKEFIGSL---DVPVI 215 (393)
T ss_dssp HHHHHHHHHHHHTTSCCEEEECTTTHHHHHHHHHHTTCSEEEEECSSCCSS---CCCC-----CHHHHHHHC---SSCEE
T ss_pred HHHHHHHHHHhhcCCeEEEEeCCccHHHHHHHHHHCCCCEEEEeCCccccc---cCCCcccHHHHHHHHHhc---CCCEE
Q ss_pred eeEEEEeCCCHHHHHHHHHHHhcCCCCCCeeeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCce---eecCCcc
Q 020848 171 SGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAM---VRLSAGR 247 (320)
Q Consensus 171 ~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~~~p~~gt~~~~~~~~~~~e~~~~~a~~R~~~p~~~---i~~~~g~ 247 (320)
+ |-..+.++ ++.+.+.| ++.|.+ .--+..+..+.....+..+.+.......+.+++... +++-..-
T Consensus 216 ~----ggi~t~e~----a~~~~~~G--ad~i~v-g~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~G 284 (393)
T 2qr6_A 216 A----GGVNDYTT----ALHMMRTG--AVGIIV-GGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADG 284 (393)
T ss_dssp E----ECCCSHHH----HHHHHTTT--CSEEEE-SCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECS
T ss_pred E----CCcCCHHH----HHHHHHcC--CCEEEE-CCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEEC
Q ss_pred cccChhHHHHHHHcCCceEeeCCccccCCC
Q 020848 248 VRFSMPEQALCFLAGANSIFTGEKLLTTPN 277 (320)
Q Consensus 248 ~~~~~~~~~~~~~~Gan~~~~~~~~~~~~~ 277 (320)
.-.....-..++..||+.++.|..++.+..
T Consensus 285 GI~~~~dv~kalalGA~~V~iG~~~l~~~e 314 (393)
T 2qr6_A 285 SIENSGDVVKAIACGADAVVLGSPLARAEE 314 (393)
T ss_dssp SCCSHHHHHHHHHHTCSEEEECGGGGGSTT
T ss_pred CCCCHHHHHHHHHcCCCEEEECHHHHcCCC
No 498
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=48.00 E-value=17 Score=32.40 Aligned_cols=25 Identities=24% Similarity=0.344 Sum_probs=18.4
Q ss_pred CCHHHHHHHHHHHHHcCCeeeeeEE
Q 020848 150 RSYDERLETLKHVREAGINVCSGGI 174 (320)
Q Consensus 150 ~~~~~~l~~i~~a~~~Gi~v~~~~i 174 (320)
......++.++.|++.|+.+.++.+
T Consensus 287 GGit~~~~i~~~A~~~gi~~~~~~~ 311 (386)
T 1wue_A 287 GGIHEALKIAAFCQENDLLVWLGGM 311 (386)
T ss_dssp TSHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCHHHHHHHHHHHHHCCCeEEECCC
Confidence 3577778888889999988754433
No 499
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=47.98 E-value=1.1e+02 Score=27.39 Aligned_cols=77 Identities=13% Similarity=0.102 Sum_probs=46.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhh-c--CceEEEe-CCCCCHHH----HHHHHHh
Q 020848 56 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-M--GMEVCCT-LGMLEKHQ----AIELKKA 127 (320)
Q Consensus 56 ~s~eei~~~~~~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~-~--~~~i~~~-~g~l~~e~----l~~L~~a 127 (320)
.++|++.+.++.+.+.|++.+.+-.|..+..| ....+.-++.++++++ . ++.+.+. |+..+.+. ++.|.+.
T Consensus 178 ~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg-~~~~~~die~v~avReavG~d~~L~vDaN~~~~~~~Ai~~~~~Le~~ 256 (412)
T 3stp_A 178 GSIEAMQKEAEEAMKGGYKAFKSRFGYGPKDG-MPGMRENLKRVEAVREVIGYDNDLMLECYMGWNLDYAKRMLPKLAPY 256 (412)
T ss_dssp CCHHHHHHHHHHHHTTTCSEEEEECCCCGGGH-HHHHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGG
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCcccc-cchHHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHhc
Confidence 37899999999999999999888432111001 1234566777777774 3 4554433 45566554 3445555
Q ss_pred ccCeec
Q 020848 128 GLTAYN 133 (320)
Q Consensus 128 Gld~v~ 133 (320)
|++.+.
T Consensus 257 ~i~~iE 262 (412)
T 3stp_A 257 EPRWLE 262 (412)
T ss_dssp CCSEEE
T ss_pred CCCEEE
Confidence 666554
No 500
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=47.82 E-value=1.4e+02 Score=25.86 Aligned_cols=139 Identities=12% Similarity=0.047 Sum_probs=73.9
Q ss_pred HHHHcCCCEEEEecccCCCCCCchhHHHHHHHHHHhhhcCceEEEe---------CCC-------C-------------C
Q 020848 67 KAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCT---------LGM-------L-------------E 117 (320)
Q Consensus 67 ~~~~~g~~~i~l~~g~~~~~ge~~~~~~l~~~i~~~k~~~~~i~~~---------~g~-------l-------------~ 117 (320)
.+++.|+..|-+.--..+..| -...+++.++++++++.|+.+.+. +|. . +
T Consensus 35 ilk~~G~N~VRi~~w~~P~~g-~~~~~~~~~~~~~A~~~GlkV~ld~Hysd~WadPg~Q~~p~~W~~~~~~~~~~~~~yt 113 (332)
T 1hjs_A 35 ILAANGVNTVRQRVWVNPADG-NYNLDYNIAIAKRAKAAGLGVYIDFHYSDTWADPAHQTMPAGWPSDIDNLSWKLYNYT 113 (332)
T ss_dssp HHHHTTCCEEEEEECSSCTTC-TTSHHHHHHHHHHHHHTTCEEEEEECCSSSCCBTTBCBCCTTCCCSHHHHHHHHHHHH
T ss_pred HHHHCCCCEEEEeeeeCCCCC-cCCHHHHHHHHHHHHHCCCEEEEEeccCCCcCCccccCCccccccchHHHHHHHHHHH
Confidence 345589888876311122222 246788999999999999986554 211 1 1
Q ss_pred HHHHHHHHHhc--cCeeccCccccHHHHhhhCCCCCHHHHHHHHHH----HHHcCCeeeeeEEEEe--CCCHHHHHHHHH
Q 020848 118 KHQAIELKKAG--LTAYNHNLDTSREFYSKIITTRSYDERLETLKH----VREAGINVCSGGIIGL--GEAEEDRVGLLH 189 (320)
Q Consensus 118 ~e~l~~L~~aG--ld~v~i~let~~~~~~~i~~~~~~~~~l~~i~~----a~~~Gi~v~~~~i~Gl--get~ed~~~~l~ 189 (320)
.+.++.|++.| ++.+.++-|.....+--.....+++...+.++. +++....-.+.+++.. +.+.+.....++
T Consensus 114 ~~vl~~l~~~g~~~~~v~vGNEi~~g~~w~~g~~~~~~~~~~l~~~~~~avR~~~~~p~~~v~ih~~~~~~~~~~~~~~d 193 (332)
T 1hjs_A 114 LDAANKLQNAGIQPTIVSIGNEIRAGLLWPTGRTENWANIARLLHSAAWGIKDSSLSPKPKIMIHLDNGWDWGTQNWWYT 193 (332)
T ss_dssp HHHHHHHHHTTCCCSEEEESSSGGGEETBTTEETTCHHHHHHHHHHHHHHHHTSCCSSCCEEEEEESCTTCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCEEEEeecccccccCcCCCccCHHHHHHHHHHHHHHHHHhccCCCCeEEEEeCCccchHHHHHHHH
Confidence 36778888877 455666665431110000011244444333333 3333210122334444 456566666667
Q ss_pred HHhcCC-C---CCCeeeeeee
Q 020848 190 TLATLP-T---HPESVPINAL 206 (320)
Q Consensus 190 ~l~~l~-~---~~~~v~~~~~ 206 (320)
.+.+.+ . ..|.|+++.|
T Consensus 194 ~~~~~g~~~~~~~DvIG~syY 214 (332)
T 1hjs_A 194 NVLKQGTLELSDFDMMGVSFY 214 (332)
T ss_dssp HHHTTSSSCGGGCCEEEEECC
T ss_pred HHHhcCCCCCCCcCEEEEecC
Confidence 676666 3 4677887744
Done!