BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020851
(320 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q15032|R3HD1_HUMAN R3H domain-containing protein 1 OS=Homo sapiens GN=R3HDM1 PE=1 SV=3
Length = 1099
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 76/159 (47%), Gaps = 15/159 (9%)
Query: 3 TTQFAMVEELAFLVKDNLPSKHLVLSMEEALVNFLQDDNSADGVLELEPMDSYNRLLLHR 62
+T + E L +K+N + ++L +E+ +++F+ ++ S + PM SY+R+LLHR
Sbjct: 148 STGIDLHEFLVNTLKNNPRDRMMLLKLEQEILDFIGNNESPRK--KFPPMTSYHRMLLHR 205
Query: 63 LADIFGFAHESVGEGVDRHLILERCSETSI-----------DILWQYGEPQSLTTSHQIL 111
+A FG H G + +I+ + S T I D + + L +
Sbjct: 206 VAAYFGLDHNVDQSG--KSVIVNKTSNTRIPDQKFNEHIKDDKGEDFQKRYILKRDNSSF 263
Query: 112 RRKEAPPVLKIQSPSGEHSLAEREAAYLAARERIFSMDA 150
+ + ++++ S+ ERE Y AR+RIFS D+
Sbjct: 264 DKDDNQMRIRLKDDRRSKSIEEREEEYQRARDRIFSQDS 302
>sp|Q8MSX1|ENC_DROME Protein encore OS=Drosophila melanogaster GN=enc PE=1 SV=2
Length = 1818
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 22/159 (13%)
Query: 4 TQFAMVEELAFL---VKDNLPSKHLVLSMEEALVNFLQDDNSADGVLELEPMDSYNRLLL 60
T + + L F + N ++++L +E+ L++F+Q+ NS P SYNR+L+
Sbjct: 422 TDYGGTDLLVFFRDTLNKNPKDRNILLKIEKDLIDFVQE-NSRGCEYRFPPASSYNRMLI 480
Query: 61 HRLADIFGFAHESVGEGVDRHLILERCSETSI-DILWQYGEPQSLT---TSHQILRR--- 113
HR A FG H +V + +I+ T I +I + QSL IL+R
Sbjct: 481 HRTAAFFGMEH-NVDTETQQCVIVAVAKNTRIPEIRF-----QSLVRDDARKSILKRDTH 534
Query: 114 -----KEAPPVLKIQSPSGEHSLAEREAAYLAARERIFS 147
+++P + + S ERE Y AR RIFS
Sbjct: 535 SFDEVRQSPYLCPLSLDRKAKSFEEREEDYDRARSRIFS 573
>sp|Q9DCB4|ARP21_MOUSE cAMP-regulated phosphoprotein 21 OS=Mus musculus GN=Arpp21 PE=1
SV=2
Length = 807
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 13 AFLV---KDNLPSKHLVLSMEEALVNFLQDDNSADGVLELEPMDSYNRLLLHRLADIFGF 69
FL+ K+N + ++L ME+ +++F+ D N + + M SY R+L+HR+A FG
Sbjct: 150 GFLINTLKNNSRDRMILLKMEQEMIDFIADSN--NHYKKFPQMSSYQRMLVHRVAAYFGL 207
Query: 70 AHESVGEGVDRHLILERCSETSID---ILWQYGEPQSLTTSHQILRRKEAPPVLKIQSPS 126
H G + +I+ + S T I + +S + + + +++ + K + +
Sbjct: 208 DHNVDQTG--KSVIINKTSSTRIPEQRFCEHLKDEKSEESQKRFILKRDNSSIDKEDNQN 265
Query: 127 GEH---------SLAEREAAYLAARERIFSMDA 150
H S+ ERE Y RERIF+ D+
Sbjct: 266 RMHPFRDDRRSKSIEEREEEYQRVRERIFAHDS 298
>sp|A0JNC2|R3HD2_BOVIN R3H domain-containing protein 2 OS=Bos taurus GN=R3HDM2 PE=2 SV=1
Length = 989
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 3 TTQFAMVEELAFLVKDNLPSKHLVLSMEEALVNFLQDDNSADGVLELEPMDSYNRLLLHR 62
+T + E L +K N + ++L +E+ +++F+ D+N+ + M SY+R+LLHR
Sbjct: 149 STGIDLHEFLVNTLKKNPRDRMMLLKLEQEILDFINDNNNQ--FKKFPQMTSYHRMLLHR 206
Query: 63 LADIFGFAHESVGEGVDRHLILERCSETSI--DILWQYGEPQSLTTSHQ--ILRRKEAPP 118
+A FG H G + +I+ + S T I ++ + + T Q IL+R +A
Sbjct: 207 VAAYFGMDHNVDQTG--KAVIINKTSNTRIPEQRFSEHIKDEKNTEFQQRFILKRDDASM 264
Query: 119 -------VLKIQSPSGEHSLAEREAAYLAARERIFS 147
+ +Q S+ ERE Y RERIF+
Sbjct: 265 DRDDNQIRVPLQDGRRSKSIEEREEEYQRVRERIFA 300
>sp|Q80TM6|R3HD2_MOUSE R3H domain-containing protein 2 OS=Mus musculus GN=R3hdm2 PE=2 SV=2
Length = 1044
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 3 TTQFAMVEELAFLVKDNLPSKHLVLSMEEALVNFLQDDNSADGVLELEPMDSYNRLLLHR 62
+T + E L +K N + ++L +E+ +++F+ D+N+ + M SY+R+LLHR
Sbjct: 149 STGIDLHEFLVNTLKKNPRDRMMLLKLEQEILDFINDNNNQ--FKKFPQMTSYHRMLLHR 206
Query: 63 LADIFGFAHESVGEGVDRHLILERCSETSI--DILWQYGEPQSLTTSHQ--ILRRKEAP- 117
+A FG H G + +I+ + S T I ++ + + T Q IL+R +A
Sbjct: 207 VAAYFGMDHNVDQTG--KAVIINKTSSTRIPEQRFSEHIKDEKNTEFQQRFILKRDDASM 264
Query: 118 ------PVLKIQSPSGEHSLAEREAAYLAARERIFS 147
+ +Q S+ ERE Y RERIF+
Sbjct: 265 DRDDNQMRVPLQDGRRSKSIEEREEEYQRVRERIFA 300
>sp|Q9UBL0|ARP21_HUMAN cAMP-regulated phosphoprotein 21 OS=Homo sapiens GN=ARPP21 PE=1
SV=2
Length = 812
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 3 TTQFAMVEELAFLVKDNLPSKHLVLSMEEALVNFLQDDNSADGVLELEPMDSYNRLLLHR 62
+T + E L +K+N + ++L ME+ +++F+ D+N + + M SY R+L+HR
Sbjct: 144 STGIDLHEFLINTLKNNSRDRMILLKMEQEIIDFIADNN--NHYKKFPQMSSYQRMLVHR 201
Query: 63 LADIFGFAHESVGEGVDRHLILERCSETSI 92
+A FG H G + +I+ + S T I
Sbjct: 202 VAAYFGLDHNVDQTG--KSVIINKTSSTRI 229
>sp|Q9Y2K5|R3HD2_HUMAN R3H domain-containing protein 2 OS=Homo sapiens GN=R3HDM2 PE=1 SV=3
Length = 976
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 3 TTQFAMVEELAFLVKDNLPSKHLVLSMEEALVNFLQDDNSADGVLELEPMDSYNRLLLHR 62
+T + E L +K N + ++L +E+ ++ F+ D+N+ + M SY+R+LLHR
Sbjct: 149 STGIDLHEFLVNTLKKNPRDRMMLLKLEQEILEFINDNNNQ--FKKFPQMTSYHRMLLHR 206
Query: 63 LADIFGFAHESVGEGVDRHLILERCSETSI 92
+A FG H G + +I+ + S T I
Sbjct: 207 VAAYFGMDHNVDQTG--KAVIINKTSNTRI 234
>sp|Q875B6|SQS1_PODAS Protein SQS1 OS=Podospora anserina GN=SQS1 PE=3 SV=1
Length = 718
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 18 DNLPSKHLV-LSMEE---ALVNFLQDDNSADGVLELEPMDSYNRLLLHRLADIFGFAHES 73
D+L K+ V L +E+ LV FL S+D LE P+D + R++LH+LA F +S
Sbjct: 528 DDLRVKYPVGLRLEDFKTELVAFLI---SSDERLEFPPLDKHGRMVLHQLALKFNVKSQS 584
Query: 74 VGEGVDRHLILERCSET 90
G+G R +L R T
Sbjct: 585 TGKGTTRRPVLYRSKRT 601
>sp|Q9EQN5|SMBP2_RAT DNA-binding protein SMUBP-2 OS=Rattus norvegicus GN=Ighmbp2 PE=1
SV=1
Length = 988
Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 52 MDSYNRLLLHRLADIFGFAHESVGEGVDRHLILER 86
+ S++RL +H+LA+ FG H+S GEG RH+ + R
Sbjct: 748 LSSHDRLRVHQLAEEFGLKHDSTGEGKARHITVSR 782
>sp|P40694|SMBP2_MOUSE DNA-binding protein SMUBP-2 OS=Mus musculus GN=Ighmbp2 PE=1 SV=1
Length = 993
Score = 40.4 bits (93), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 52 MDSYNRLLLHRLADIFGFAHESVGEGVDRHLILERCSETS 91
+ S++RL +H+LA+ FG H+S GEG RH+ + R S S
Sbjct: 748 LSSHDRLRVHQLAEEFGLRHDSTGEGKARHITVSRRSPAS 787
>sp|Q60560|SMBP2_MESAU DNA-binding protein SMUBP-2 OS=Mesocricetus auratus GN=IGHMBP2 PE=1
SV=1
Length = 989
Score = 38.5 bits (88), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 52 MDSYNRLLLHRLADIFGFAHESVGEGVDRHLILER 86
+ S++RLL+H++A+ G H+S GEG RH+ + R
Sbjct: 748 LSSHDRLLVHQIAEEHGLRHDSTGEGKARHITVSR 782
>sp|Q05672|RBS1_YEAST RNA-binding suppressor of PAS kinase protein 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RBS1 PE=1
SV=1
Length = 457
Score = 37.0 bits (84), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 25 LVLSMEEALVNFLQDDNSADGVLELEPMDSYNRLLLHRLADIFGFAH 71
++ +E ++V+F+ NS +L PM+SY RLL H++A+ H
Sbjct: 28 FIIELENSIVSFI---NSNTESFQLRPMNSYYRLLSHQIAEYHNLNH 71
>sp|Q6ABU3|PATR_PROAC Putative phenylalanine aminotransferase OS=Propionibacterium acnes
(strain KPA171202 / DSM 16379) GN=pat PE=3 SV=1
Length = 352
Score = 35.8 bits (81), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 26/143 (18%)
Query: 23 KHLVLSMEEALVNFLQDDNSADGVLELEPMDSYNRLLLHRLADIFGFAHESVGEGVDRHL 82
+++V+ M+EA +F +DD + DG+ LE D N ++L + +G A +G +
Sbjct: 177 ENVVVVMDEAYCHFNRDDAAVDGLTLLE--DHPNVVVLRTFSKAYGLAGLRIGFAIS--- 231
Query: 83 ILERCSETSIDILWQYGEPQSLTTSHQILRRKEAPPVLKIQSPSGEHSLAEREAAYLAAR 142
E S D L + P ++TT L ++ A I S + E L ER +A R
Sbjct: 232 ----TPEIS-DDLRRVATPFTVTT----LAQQAA-----IASLAAEDELNERVNRIVAER 277
Query: 143 ERIFSMDARTVAEPVRQKPRSVP 165
R+F E RQ + VP
Sbjct: 278 TRVFD-------ELTRQGWKIVP 293
>sp|P0C9P5|36010_ASFP4 Protein MGF 360-10L OS=African swine fever virus (isolate
Tick/South Africa/Pretoriuskop Pr4/1996) GN=Pret-032
PE=3 SV=1
Length = 356
Score = 35.4 bits (80), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 6/36 (16%)
Query: 77 GVDRHLILERCSETSIDILWQYGEPQSLTTSHQILR 112
+D H+ILERC LW Y P SL H +++
Sbjct: 19 SIDHHIILERCG------LWWYKAPISLDCKHMLIK 48
>sp|B1J675|FOLD_PSEPW Bifunctional protein FolD OS=Pseudomonas putida (strain W619)
GN=folD PE=3 SV=1
Length = 284
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 13/120 (10%)
Query: 9 VEELAFLVKD-NLPSKHLVLSMEEALVNFLQDDNSADGVLELEPMDSY--NRLLLHRL-- 63
EE+ F+ + +LPS+ ++ E L++ L DD + DG+L P+ ++ LLL R+
Sbjct: 58 CEEVGFISQAFDLPSETTQQALTE-LIDRLNDDPAVDGILLQLPLPAHLDASLLLERIRP 116
Query: 64 -ADIFGFAHESVGEGVDRHLILERCSETSIDILWQ------YGEPQSLTTSHQILRRKEA 116
D+ GF ++G R +L C+ I L + YG + + I+ R A
Sbjct: 117 DKDVDGFHPYNIGRLAQRIPLLRPCTPKGIMTLLESTGQDLYGMNAVIVGASNIVGRPMA 176
>sp|B0KJG3|FOLD1_PSEPG Bifunctional protein FolD 1 OS=Pseudomonas putida (strain GB-1)
GN=folD1 PE=3 SV=1
Length = 290
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 13/120 (10%)
Query: 9 VEELAFLVKD-NLPSKHLVLSMEEALVNFLQDDNSADGVLELEPMDSY--NRLLLHRL-- 63
EE+ F+ + +LPS+ ++ E L++ L DD + DG+L P+ ++ LLL R+
Sbjct: 64 CEEVGFISQAFDLPSETTQQALTE-LIDRLNDDPAVDGILLQLPLPAHLDASLLLERIRP 122
Query: 64 -ADIFGFAHESVGEGVDRHLILERCSETSIDILWQ------YGEPQSLTTSHQILRRKEA 116
D+ GF ++G R +L C+ I L + YG + + I+ R A
Sbjct: 123 DKDVDGFHPYNIGRLAQRIPLLRPCTPKGIMTLLESTGQDLYGMNAVIVGASNIVGRPMA 182
>sp|A5W638|FOLD_PSEP1 Bifunctional protein FolD OS=Pseudomonas putida (strain F1 / ATCC
700007) GN=folD PE=3 SV=2
Length = 284
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 13/120 (10%)
Query: 9 VEELAFLVKD-NLPSKHLVLSMEEALVNFLQDDNSADGVLELEPMDSY--NRLLLHRL-- 63
EE+ F+ + +LPS+ ++ E L++ L DD + DG+L P+ ++ LLL R+
Sbjct: 58 CEEVGFISQAFDLPSETTQQALTE-LIDRLNDDPAVDGILLQLPLPAHLDASLLLERIRP 116
Query: 64 -ADIFGFAHESVGEGVDRHLILERCSETSIDILWQ------YGEPQSLTTSHQILRRKEA 116
D+ GF ++G R +L C+ I L + YG + + I+ R A
Sbjct: 117 DKDVDGFHPYNIGRLAQRIPLLRPCTPKGIMTLLESTGQDLYGMNAVIVGASNIVGRPMA 176
>sp|Q88KM5|FOLD2_PSEPK Bifunctional protein FolD 2 OS=Pseudomonas putida (strain KT2440)
GN=folD2 PE=3 SV=1
Length = 284
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 13/120 (10%)
Query: 9 VEELAFLVKD-NLPSKHLVLSMEEALVNFLQDDNSADGVLELEPMDSY--NRLLLHRL-- 63
EE+ F+ + +LPS+ ++ E L++ L DD + DG+L P+ ++ LLL R+
Sbjct: 58 CEEVGFISQAFDLPSETTQQALTE-LIDRLNDDPAVDGILLQLPLPAHLDASLLLERIRP 116
Query: 64 -ADIFGFAHESVGEGVDRHLILERCSETSIDILWQ------YGEPQSLTTSHQILRRKEA 116
D+ GF ++G R +L C+ I L + YG + + I+ R A
Sbjct: 117 DKDVDGFHPYNIGRLAQRIPLLRPCTPKGIMTLLESTGQDLYGMNAVIVGASNIVGRPMA 176
>sp|P38935|SMBP2_HUMAN DNA-binding protein SMUBP-2 OS=Homo sapiens GN=IGHMBP2 PE=1 SV=3
Length = 993
Score = 32.7 bits (73), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 47 LELEP-MDSYNRLLLHRLADIFGFAHESVGEGVDRHLILER 86
LE P ++S++RL +H++A+ G H+S GEG R + + +
Sbjct: 744 LEFPPSLNSHDRLRVHQIAEEHGLRHDSSGEGKRRFITVSK 784
>sp|P75261|Y137_MYCPN UPF0134 protein MPN_137 OS=Mycoplasma pneumoniae (strain ATCC 29342
/ M129) GN=MPN_137 PE=3 SV=1
Length = 228
Score = 32.0 bits (71), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 11/88 (12%)
Query: 155 EPVRQKPRSVPIVAQRMIAHA-LGQKMKSGDQDTAVRDEITNEKLANEINIRESDKAGPN 213
E V +KP + + + H L QK+K QD V ++ A + ++R+S+ A N
Sbjct: 49 EVVTKKP------STKYVTHKQLDQKLKEFKQDLMVE---LHDTFATKADLRDSE-ARIN 98
Query: 214 TSLEAYQETTLLPGQNVNSLDKSNKKKG 241
LEA + LL G+ +N L + +K+G
Sbjct: 99 QKLEALVQVVLLHGEQINKLTQIVEKQG 126
>sp|P16163|URIC_DROME Uricase OS=Drosophila melanogaster GN=Uro PE=1 SV=2
Length = 352
Score = 31.6 bits (70), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 9/74 (12%)
Query: 84 LERCSETSIDILWQYGEPQSL-------TTSHQILRRKEAPPVLKIQSPSGEHS--LAER 134
+R T +D W+Y + ++L T + I+R P + + SPS +H+ L+ER
Sbjct: 229 YDRIFSTVVDCSWEYSDTENLDFLRAWQTVKNIIIRNFAGDPQVGVSSPSVQHTLYLSER 288
Query: 135 EAAYLAARERIFSM 148
+ + + + SM
Sbjct: 289 QVLDVLPQVSVISM 302
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.126 0.337
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,157,307
Number of Sequences: 539616
Number of extensions: 4442178
Number of successful extensions: 12935
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 79
Number of HSP's that attempted gapping in prelim test: 12845
Number of HSP's gapped (non-prelim): 149
length of query: 320
length of database: 191,569,459
effective HSP length: 117
effective length of query: 203
effective length of database: 128,434,387
effective search space: 26072180561
effective search space used: 26072180561
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)