Your job contains 1 sequence.
>020860
MGCFIKFSSPAILFMFLSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSI
IPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYVETGDPDLLLAVSGATADCGMN
WEYSYGSWLLPTISDSGAATVLVEGLEVGLTVSLKEQGGIVKVILVDCGSHVRDISIKVD
GGASWLYQALFEAFEGKIKSAVESAVTKKISELITKLDSIFQSLPKQIPVSDIASMNTSF
VRSPVLSDSSVEVEINGLFTAISGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSG
ALVYFNSGTVVFLWLQLGLC
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 020860
(320 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2010592 - symbol:AT1G04970 species:3702 "Arabi... 633 6.2e-62 1
TAIR|locus:2092334 - symbol:AT3G20270 species:3702 "Arabi... 546 1.0e-52 1
UNIPROTKB|I3L5U6 - symbol:LBP "Uncharacterized protein" s... 206 1.6e-14 1
UNIPROTKB|F1Q3I0 - symbol:F1Q3I0 "Uncharacterized protein... 196 3.2e-13 1
UNIPROTKB|P17213 - symbol:BPI "Bactericidal permeability-... 184 9.2e-12 1
RGD|1303179 - symbol:Bpi "bactericidal/permeability-incre... 182 1.6e-11 1
UNIPROTKB|P18428 - symbol:LBP "Lipopolysaccharide-binding... 177 6.1e-11 1
ZFIN|ZDB-GENE-070912-360 - symbol:si:dkey-11f4.4 "si:dkey... 172 2.2e-10 1
UNIPROTKB|F1Q3J3 - symbol:BPI "Uncharacterized protein" s... 170 4.0e-10 1
UNIPROTKB|I3LFA0 - symbol:BPI "Uncharacterized protein" s... 168 6.8e-10 1
UNIPROTKB|G3N2G9 - symbol:G3N2G9 "Uncharacterized protein... 164 1.3e-09 1
UNIPROTKB|F1MNN7 - symbol:LBP "Lipopolysaccharide-binding... 156 1.6e-08 1
UNIPROTKB|Q2TBI0 - symbol:LBP "Lipopolysaccharide-binding... 156 1.6e-08 1
UNIPROTKB|F1NYJ8 - symbol:F1NYJ8 "Uncharacterized protein... 146 2.3e-07 1
UNIPROTKB|P17453 - symbol:BPI "Bactericidal permeability-... 119 5.4e-07 2
MGI|MGI:3045315 - symbol:Bpi "bactericidal permeablility ... 141 8.3e-07 1
MGI|MGI:103151 - symbol:Pltp "phospholipid transfer prote... 138 1.9e-06 1
UNIPROTKB|E9PSP1 - symbol:Pltp "Protein Pltp" species:101... 138 1.9e-06 1
RGD|61865 - symbol:Lbp "lipopolysaccharide binding protei... 117 3.0e-06 2
UNIPROTKB|P17454 - symbol:LBP "Lipopolysaccharide-binding... 136 3.1e-06 1
MGI|MGI:1098776 - symbol:Lbp "lipopolysaccharide binding ... 135 4.0e-06 1
UNIPROTKB|E2QW61 - symbol:LBP "Uncharacterized protein" s... 126 1.0e-05 1
ZFIN|ZDB-GENE-040801-22 - symbol:pltp "phospholipid trans... 130 1.5e-05 1
UNIPROTKB|F1MQ17 - symbol:BPI "Bactericidal permeability-... 119 7.4e-05 2
DICTYBASE|DDB_G0280281 - symbol:DDB_G0280281 species:4468... 125 7.5e-05 1
UNIPROTKB|F1NXX9 - symbol:BPI "Uncharacterized protein" s... 117 0.00026 1
UNIPROTKB|F1P8V0 - symbol:PLTP "Uncharacterized protein" ... 119 0.00027 1
UNIPROTKB|E1C2X7 - symbol:E1C2X7 "Uncharacterized protein... 118 0.00029 1
UNIPROTKB|F1P0T1 - symbol:CETP "Cholesteryl ester transfe... 116 0.00058 1
UNIPROTKB|Q3V6R6 - symbol:CETP "Cholesteryl ester transfe... 116 0.00058 1
UNIPROTKB|J9P6T3 - symbol:PLTP "Uncharacterized protein" ... 114 0.00094 1
>TAIR|locus:2010592 [details] [associations]
symbol:AT1G04970 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008289 "lipid binding"
evidence=IEA;ISS] [GO:0005773 "vacuole" evidence=IDA] [GO:0005774
"vacuolar membrane" evidence=IDA] InterPro:IPR001124
InterPro:IPR017942 InterPro:IPR017943 Pfam:PF01273 Pfam:PF02886
SMART:SM00328 SMART:SM00329 EMBL:CP002684 GO:GO:0005774
GO:GO:0008289 EMBL:AC004809 SUPFAM:SSF55394 eggNOG:NOG262970
EMBL:BT004276 EMBL:BT005587 EMBL:AY087735 IPI:IPI00534998
PIR:C86183 RefSeq:NP_563724.1 UniGene:At.27692
ProteinModelPortal:Q9MAU5 SMR:Q9MAU5 PRIDE:Q9MAU5 DNASU:839357
EnsemblPlants:AT1G04970.1 GeneID:839357 KEGG:ath:AT1G04970
TAIR:At1g04970 HOGENOM:HOG000006128 InParanoid:Q9MAU5 OMA:SGTTCNL
PhylomeDB:Q9MAU5 ProtClustDB:CLSN2916967 Genevestigator:Q9MAU5
Uniprot:Q9MAU5
Length = 488
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 126/300 (42%), Positives = 186/300 (62%)
Query: 13 LFMFL-SLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKS 71
LF+ L S +P+ + + S ++S+ GLDF KN L+NKA +SIIPL++P IEKS
Sbjct: 8 LFLLLPSFFFLPSQTQ---STDSFTSVLVSQNGLDFVKNLLVNKAIASIIPLQIPRIEKS 64
Query: 72 KKIPLIGKVHMALSNIIIYSVEIDSSYVETGDPDLLLAVSGATADCGMNWEYSYGSWLLP 131
KIP +G + + +SN+ IY +++ SSYV+ G+ +++ SG T + MNW YSY +WL P
Sbjct: 65 MKIPFLGGIDVVVSNLTIYELDVASSYVKLGETGVVIVASGTTCNLSMNWHYSYSTWLPP 124
Query: 132 T-ISDSGAAXXXXXXXXXXXXXXXKEQGGIVKVILVDCGSHVRDISIKVDGGASWLYQAL 190
ISD G A K G +K+ L +CG HV DI+I+++GGASW YQ +
Sbjct: 125 IEISDQGIASVQVQGMEIGLSLGLKSDEGGLKLSLSECGCHVEDITIELEGGASWFYQGM 184
Query: 191 FEAFEGKIKSAVESAVTKKISELITKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSS 250
AF+ +I S+VES + KK++E ++ LDS QSLPK+IPV D A +N +F P+L +SS
Sbjct: 185 VNAFKDQIGSSVESTIAKKLTEGVSDLDSFLQSLPKEIPVDDNADLNVTFTSDPILRNSS 244
Query: 251 VEVEINGLFTAISGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGTV 310
+ EI+GLFT +L + K S C +KM+GI ++E VF+S A +Y+N+ V
Sbjct: 245 ITFEIDGLFTKGETNQVLKSFFKKSVSLVICPGNSKMLGISVDEAVFNSAAALYYNADFV 304
>TAIR|locus:2092334 [details] [associations]
symbol:AT3G20270 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008289 "lipid binding" evidence=IEA;ISS]
InterPro:IPR001124 InterPro:IPR001810 InterPro:IPR017942
InterPro:IPR017943 Pfam:PF01273 Pfam:PF02886 SMART:SM00328
SMART:SM00329 EMBL:CP002686 SUPFAM:SSF81383 GO:GO:0008289
SUPFAM:SSF55394 OMA:ARVQLYN IPI:IPI00517296 RefSeq:NP_001189939.1
RefSeq:NP_851006.1 UniGene:At.44954 ProteinModelPortal:F4JDK0
SMR:F4JDK0 PRIDE:F4JDK0 EnsemblPlants:AT3G20270.1
EnsemblPlants:AT3G20270.3 GeneID:821571 KEGG:ath:AT3G20270
Uniprot:F4JDK0
Length = 722
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 131/313 (41%), Positives = 180/313 (57%)
Query: 7 FSSPAILFMFLSLLLIP-----------TSAHVQVNEGGYISAVISKKGLDFFKNYLINK 55
FS P+ LF FL + L+ +S Q N GG+IS ++S+ GL+F K+YLI K
Sbjct: 234 FSYPSTLFFFLEMALMKVMTILVLFVSVSSTLAQSNNGGHISIIVSETGLEFAKDYLIKK 293
Query: 56 ATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYVETGDPDLLLAVSGATA 115
++ +PL+LPDIE KIPLIGKV M LSNI I +V + SS +ET ++L+V GATA
Sbjct: 294 VITTTLPLQLPDIENKVKIPLIGKVRMGLSNIQIDAVHVQSSKMETRKDGIILSVLGATA 353
Query: 116 DCGMNWEYSYGSWLLPTISDSGAAXXXXXXXXXXXXXXXKEQGGIVKVILVDCGSHVRDI 175
+ M+W Y+Y + ISD G A G +K+ + V++I
Sbjct: 354 NLSMDWSYTYRASFFE-ISDHGDASVEVKGMNVRITATLVNDNGSLKIASRENDCTVKNI 412
Query: 176 SIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKISELITKLDSIFQSLPKQIPVSDIAS 235
I ++GGASWLYQ + +AF+ I S VE V+ KI E + KLDS QSLPKQ + D A+
Sbjct: 413 DIHINGGASWLYQGVVDAFQKMIISTVEKTVSTKIVEKMKKLDSFLQSLPKQRKIDDSAA 472
Query: 236 MNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYYHKGFESSASCSSPAK-MIGIQLNE 294
+N +F +PVL +SSVEV+INGLF G + G SS+ K M+ I + E
Sbjct: 473 VNLTFTGNPVLGNSSVEVDINGLFMP-KGDDIKV---AGSRSSSFFGGVNKRMVTISVEE 528
Query: 295 NVFSSGALVYFNS 307
VF+S LVYFN+
Sbjct: 529 GVFNSATLVYFNA 541
>UNIPROTKB|I3L5U6 [details] [associations]
symbol:LBP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005102 "receptor binding" evidence=IEA] [GO:0002281
"macrophage activation involved in immune response" evidence=IEA]
[GO:0002232 "leukocyte chemotaxis involved in inflammatory
response" evidence=IEA] [GO:0001530 "lipopolysaccharide binding"
evidence=IEA] [GO:0090023 "positive regulation of neutrophil
chemotaxis" evidence=IEA] [GO:0071223 "cellular response to
lipoteichoic acid" evidence=IEA] [GO:0070891 "lipoteichoic acid
binding" evidence=IEA] [GO:0060265 "positive regulation of
respiratory burst involved in inflammatory response" evidence=IEA]
[GO:0051637 "Gram-positive bacterial cell surface binding"
evidence=IEA] [GO:0051636 "Gram-negative bacterial cell surface
binding" evidence=IEA] [GO:0050830 "defense response to
Gram-positive bacterium" evidence=IEA] [GO:0050829 "defense
response to Gram-negative bacterium" evidence=IEA] [GO:0045087
"innate immune response" evidence=IEA] [GO:0044130 "negative
regulation of growth of symbiont in host" evidence=IEA] [GO:0043032
"positive regulation of macrophage activation" evidence=IEA]
[GO:0042535 "positive regulation of tumor necrosis factor
biosynthetic process" evidence=IEA] [GO:0034145 "positive
regulation of toll-like receptor 4 signaling pathway" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032757 "positive regulation of
interleukin-8 production" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032722
"positive regulation of chemokine production" evidence=IEA]
[GO:0032720 "negative regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032490 "detection of molecule of
bacterial origin" evidence=IEA] [GO:0031663
"lipopolysaccharide-mediated signaling pathway" evidence=IEA]
[GO:0015920 "lipopolysaccharide transport" evidence=IEA]
[GO:0006953 "acute-phase response" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] InterPro:IPR001124
InterPro:IPR017942 InterPro:IPR017943 InterPro:IPR017954
Pfam:PF01273 Pfam:PF02886 PROSITE:PS00400 SMART:SM00328
SMART:SM00329 GO:GO:0005615 GO:GO:0050829 GO:GO:0050830
GO:GO:0006953 GO:GO:0045087 GO:GO:0032722 GO:GO:0032755
GO:GO:0032720 GO:GO:0044130 GO:GO:0032757 GO:GO:0032760
GO:GO:0001530 SUPFAM:SSF55394 GeneTree:ENSGT00620000087589
GO:GO:0051636 GO:GO:0090023 GO:GO:0042535 GO:GO:0031663
GO:GO:0070891 GO:GO:0071223 GO:GO:0043032 GO:GO:0051637
GO:GO:0032490 GO:GO:0002281 OMA:RNHRSPV GO:GO:0002232 GO:GO:0015920
GO:GO:0060265 GO:GO:0034145 EMBL:FP339579
Ensembl:ENSSSCT00000032321 Uniprot:I3L5U6
Length = 481
Score = 206 (77.6 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 68/307 (22%), Positives = 127/307 (41%)
Query: 8 SSPAILFMFLSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPD 67
S+ A+ + L +LL + N G + A I+ KGL++ + S + + LPD
Sbjct: 4 SAGALPSLLLGILLTSILGSLGANPG--LVARITNKGLEYVAREGVATLQSKLHEVTLPD 61
Query: 68 IEKSKKIPLIGKVHMALSNIIIYSVEI-DSSYVETGDPDLLLAVSGATADCGMNWEYSYG 126
KI +G+ H ++ I+S E+ S+ L LA+S ++ W+ G
Sbjct: 62 FNGDFKIKYMGRGHYEFHSLDIHSCELLGSTLTPLPGQGLYLAISDSSIRVKGKWKVRKG 121
Query: 127 SWLLPTISDSGAAXXXXXXXXXXXXXXXKEQGGIVKVILVDCGSHVRDISIKVDGGASWL 186
L D E G V + C SH+ D+ + G SWL
Sbjct: 122 ILKL----DGSFDVKVKGITISVNLLLGSESSGRPTVAVSSCSSHIDDVETHMSGDLSWL 177
Query: 187 YQALFEAFEGKIKSAVESAVTKKISELITK-LDSIFQSLPKQIPVSDIASMNTSFVRSPV 245
E + + +ES + ++I +L+ L Q++P + ++A ++ S V +P
Sbjct: 178 LNLFHNQIESRFRRTLESKICEEIQDLVASDLQPYLQTVPVTTEIDNLAGIDYSLVEAPR 237
Query: 246 LSDSSVEVEINGLFTAISGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYF 305
+ ++V I G ++ S + + S +M+ +++ VF + +LVY
Sbjct: 238 ATAQMLDVMIKGEIFSLDHRSPVGFLAPVMRLPEEHS---RMVYFAVSDYVFKTASLVYN 294
Query: 306 NSGTVVF 312
+G + F
Sbjct: 295 EAGFLNF 301
>UNIPROTKB|F1Q3I0 [details] [associations]
symbol:F1Q3I0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008289 "lipid binding" evidence=IEA]
InterPro:IPR001124 InterPro:IPR017942 InterPro:IPR017943
Pfam:PF01273 Pfam:PF02886 SMART:SM00328 SMART:SM00329 GO:GO:0008289
SUPFAM:SSF55394 GeneTree:ENSGT00620000087589 EMBL:AAEX03013925
Ensembl:ENSCAFT00000014146 OMA:TPFKGEF Uniprot:F1Q3I0
Length = 483
Score = 196 (74.1 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 71/311 (22%), Positives = 131/311 (42%)
Query: 10 PAILFMFLSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIE 69
P + + L LL + + + G++ A I++KGL++ + Y + + +ELPD
Sbjct: 8 PHCVVVVLLLLAVVSGLEEGASNPGFV-ARITRKGLEYARQYGVAILKKELSTIELPDFS 66
Query: 70 KSKKIPLIGKVHMALSNIIIYSVEIDSSYVETGDPDLLLAV-SGATADCGMNWEYSYGSW 128
S K+ I + + I+ E+ +S DL L G A N+ G+W
Sbjct: 67 GSFKVSWIKIMSYEFYRLKIHDFELRNS-------DLRLCPRQGVRASLSNNYVSVSGNW 119
Query: 129 LLPT--ISDSGAAXXXXXXX-XXXXXXXXKEQGGIVKVILVDCGSHVRDISIKVDGGASW 185
+ S G K+Q G + + C + + ISI + G SW
Sbjct: 120 KIKKAFFSFDGTFEMKVDDICISAFLNLGKDQSGRLTASMAHCNNSIGHISIDISGKLSW 179
Query: 186 LYQALFEAFEGKIKSAVESAVTKKISELIT-KLDSIFQSLPKQIPVSDIASMNTSFVRSP 244
+ E E K K+ +E + + + + T +L+ Q+LP + +AS++ S + +P
Sbjct: 180 ILNLFHERIENKFKNILEQKICEMVEKATTSRLEPYLQTLPVISMIDQVASIDYSLIGAP 239
Query: 245 VLSDSSVEVEINGLFTAISGTSMLNYYHKGFESSASCSSPAK---MIGIQLNENVFSSGA 301
++ ++ G F +G S FE+ P K M+ ++E VF++ +
Sbjct: 240 QVNSQVLDTPFKGEFFGQNGHS-----RAPFEAPP-IRLPEKHDYMVYFAISEYVFNTAS 293
Query: 302 LVYFNSGTVVF 312
VY +G + F
Sbjct: 294 WVYHQAGYMNF 304
>UNIPROTKB|P17213 [details] [associations]
symbol:BPI "Bactericidal permeability-increasing protein"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006955 "immune response" evidence=IEA] [GO:0042742 "defense
response to bacterium" evidence=IEA] [GO:0051636 "Gram-negative
bacterial cell surface binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0001530 "lipopolysaccharide
binding" evidence=IDA] [GO:0032715 "negative regulation of
interleukin-6 production" evidence=IDA] [GO:0032717 "negative
regulation of interleukin-8 production" evidence=IDA] [GO:0032720
"negative regulation of tumor necrosis factor production"
evidence=IDA] [GO:0043031 "negative regulation of macrophage
activation" evidence=IDA] InterPro:IPR001124 InterPro:IPR017942
InterPro:IPR017943 InterPro:IPR017954 Pfam:PF01273 Pfam:PF02886
PROSITE:PS00400 SMART:SM00328 SMART:SM00329 GO:GO:0005737
GO:GO:0005576 GO:GO:0005887 GO:GO:0006955 GO:GO:0042742
GO:GO:0032720 GO:GO:0032715 GO:GO:0032717 GO:GO:0001530
SUPFAM:SSF55394 eggNOG:NOG262970 CTD:671 HOVERGEN:HBG002797
GO:GO:0043031 EMBL:J04739 EMBL:DQ414688 EMBL:AK315328 EMBL:AL391692
EMBL:AL499625 EMBL:AL583962 EMBL:AL359555 EMBL:BC040955
EMBL:AF322588 IPI:IPI00827847 PIR:A33850 RefSeq:NP_001716.2
UniGene:Hs.529019 PDB:1BP1 PDB:1EWF PDBsum:1BP1 PDBsum:1EWF
ProteinModelPortal:P17213 SMR:P17213 STRING:P17213 TCDB:1.C.40.1.1
PhosphoSite:P17213 DMDM:215274242 PaxDb:P17213 PRIDE:P17213
Ensembl:ENST00000262865 GeneID:671 KEGG:hsa:671 UCSC:uc002xib.2
GeneCards:GC20P036888 H-InvDB:HIX0027669 HGNC:HGNC:1095 MIM:109195
neXtProt:NX_P17213 PharmGKB:PA25403 InParanoid:P17213 OMA:ARVQLYN
PhylomeDB:P17213 ChiTaRS:BPI EvolutionaryTrace:P17213
GenomeRNAi:671 NextBio:2748 ArrayExpress:P17213 Bgee:P17213
Genevestigator:P17213 GermOnline:ENSG00000101425 GO:GO:0051636
Uniprot:P17213
Length = 487
Score = 184 (69.8 bits), Expect = 9.2e-12, P = 9.2e-12
Identities = 61/295 (20%), Positives = 125/295 (42%)
Query: 19 LLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIG 78
L+ I T+ VN G + IS+KGLD+ + +++PD S KI +G
Sbjct: 21 LVAIGTAVTAAVNPGVVVR--ISQKGLDYASQQGTAALQKELKRIKIPDYSDSFKIKHLG 78
Query: 79 KVHMALSNIIIYSVEIDSSYVE-TGDPDLLLAVSGATADCGMNWEYSYGSWLLPTISDSG 137
K H + ++ I ++ SS + + L ++S A W+ + +L +S +
Sbjct: 79 KGHYSFYSMDIREFQLPSSQISMVPNVGLKFSISNANIKISGKWK-AQKRFL--KMSGNF 135
Query: 138 AAXXXXXXXXXXXXXXXKEQGGIVKVILVDCGSHVRDISIKVDGG-ASWLYQALFEAFEG 196
G + C SH+ + + + WL Q + E
Sbjct: 136 DLSIEGMSISADLKLGSNPTSGKPTITCSSCSSHINSVHVHISKSKVGWLIQLFHKKIES 195
Query: 197 KIKSAVESAVTKKISELIT-KLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEI 255
+++ + S V +K++ ++ +L FQ+LP + +A +N V P + +++V++
Sbjct: 196 ALRNKMNSQVCEKVTNSVSSELQPYFQTLPVMTKIDSVAGINYGLVAPPATTAETLDVQM 255
Query: 256 NGLFTAISGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGTV 310
G F + + + + E A+ +M+ + L++ F++ LVY +G +
Sbjct: 256 KGEFYSENHHNPPPFAPPVMEFPAAHD---RMVYLGLSDYFFNTAGLVYQEAGVL 307
>RGD|1303179 [details] [associations]
symbol:Bpi "bactericidal/permeability-increasing protein"
species:10116 "Rattus norvegicus" [GO:0001530 "lipopolysaccharide
binding" evidence=ISO;IDA] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006955
"immune response" evidence=IDA] [GO:0008289 "lipid binding"
evidence=TAS] [GO:0016020 "membrane" evidence=IEA] [GO:0032715
"negative regulation of interleukin-6 production" evidence=IEA;ISO]
[GO:0032717 "negative regulation of interleukin-8 production"
evidence=IEA;ISO] [GO:0032720 "negative regulation of tumor
necrosis factor production" evidence=IEA;ISO] [GO:0042742 "defense
response to bacterium" evidence=IDA] [GO:0043031 "negative
regulation of macrophage activation" evidence=IEA;ISO] [GO:0051636
"Gram-negative bacterial cell surface binding" evidence=IDA]
InterPro:IPR001124 InterPro:IPR017942 InterPro:IPR017943
Pfam:PF01273 Pfam:PF02886 PROSITE:PS00400 SMART:SM00328
SMART:SM00329 RGD:1303179 GO:GO:0005737 GO:GO:0005576 GO:GO:0006955
GO:GO:0016020 GO:GO:0042742 GO:GO:0032720 GO:GO:0032715
GO:GO:0032717 GO:GO:0001530 SUPFAM:SSF55394
GeneTree:ENSGT00620000087589 eggNOG:NOG262970 CTD:671
HOGENOM:HOG000231250 HOVERGEN:HBG002797 OrthoDB:EOG4JDH6R
GO:GO:0043031 GO:GO:0051636 HSSP:P17213 EMBL:BC079318
IPI:IPI00364963 RefSeq:NP_001004079.1 UniGene:Rn.109395
ProteinModelPortal:Q6AXU0 SMR:Q6AXU0 STRING:Q6AXU0 PRIDE:Q6AXU0
Ensembl:ENSRNOT00000039994 GeneID:296321 KEGG:rno:296321
InParanoid:Q6AXU0 NextBio:641019 Genevestigator:Q6AXU0
Uniprot:Q6AXU0
Length = 482
Score = 182 (69.1 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 56/246 (22%), Positives = 102/246 (41%)
Query: 17 LSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPL 76
L+LL I +A + G++ A IS+KGLDF + + ++ + +PD KI
Sbjct: 14 LALLAIVGTALTAATDPGFV-ARISQKGLDFVCQESMVELQKELLAISIPDFSGDFKIKH 72
Query: 77 IGKVHMALSNIIIYSVEIDSSYVETGDPD-LLLAVSGATADCGMNWEYSYGSWLLPTISD 135
+GK ++ + I ++ D L L+++ A+ W+Y +L +
Sbjct: 73 LGKGTYEFYSMAVEGFHIPDPQIKLLPSDGLQLSITSASIKISGRWKYRKN--ILK--AS 128
Query: 136 SGAAXXXXXXXXXXXXXXXKEQGGIVKVILVDCGSHVRDISIKVDGGA-SWLYQALFEAF 194
+ G + + C SH+ + IKV G WL Q
Sbjct: 129 GNFQLSIQGVSIIADLILGNDPSGRITITCSTCDSHINSVRIKVSGSMLGWLIQLFHRKI 188
Query: 195 EGKIKSAVESAVTKKISELIT-KLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEV 253
E +K + + K + ++ KL ++LP V DI S++ S + P+ +D +E
Sbjct: 189 ETSLKKTIYKKICKIVRNSVSAKLQPYVKTLPVVAKVDDITSIDYSLLAPPMTTDKFLEG 248
Query: 254 EINGLF 259
++ G F
Sbjct: 249 QLRGEF 254
>UNIPROTKB|P18428 [details] [associations]
symbol:LBP "Lipopolysaccharide-binding protein"
species:9606 "Homo sapiens" [GO:0002232 "leukocyte chemotaxis
involved in inflammatory response" evidence=IEA] [GO:0032722
"positive regulation of chemokine production" evidence=IEA]
[GO:0042535 "positive regulation of tumor necrosis factor
biosynthetic process" evidence=IEA] [GO:0044130 "negative
regulation of growth of symbiont in host" evidence=IEA] [GO:0090023
"positive regulation of neutrophil chemotaxis" evidence=IEA]
[GO:0001530 "lipopolysaccharide binding" evidence=ISS;IDA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=ISS;IDA] [GO:0070891 "lipoteichoic acid
binding" evidence=IDA] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IDA] [GO:0071223 "cellular response to
lipoteichoic acid" evidence=IDA] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0008063 "Toll signaling pathway" evidence=TAS]
[GO:0045087 "innate immune response" evidence=IC;ISS;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005615
"extracellular space" evidence=ISS;IDA] [GO:0002281 "macrophage
activation involved in immune response" evidence=ISS] [GO:0051636
"Gram-negative bacterial cell surface binding" evidence=ISS;IDA]
[GO:0006968 "cellular defense response" evidence=ISS] [GO:0050829
"defense response to Gram-negative bacterium" evidence=ISS]
[GO:0050830 "defense response to Gram-positive bacterium"
evidence=IC;IEP] [GO:0006953 "acute-phase response"
evidence=IEP;ISS] [GO:0008228 "opsonization" evidence=IC;ISS]
[GO:0051637 "Gram-positive bacterial cell surface binding"
evidence=IDA] [GO:0015920 "lipopolysaccharide transport"
evidence=IDA] [GO:0032490 "detection of molecule of bacterial
origin" evidence=IDA] [GO:0034145 "positive regulation of toll-like
receptor 4 signaling pathway" evidence=IDA] [GO:0032496 "response
to lipopolysaccharide" evidence=IDA] [GO:0043498 "cell surface
binding" evidence=ISS] [GO:0060265 "positive regulation of
respiratory burst involved in inflammatory response" evidence=ISS]
[GO:0005102 "receptor binding" evidence=ISS] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IDA] [GO:0032757
"positive regulation of interleukin-8 production" evidence=IDA]
[GO:0043032 "positive regulation of macrophage activation"
evidence=IDA] [GO:0031663 "lipopolysaccharide-mediated signaling
pathway" evidence=IDA] [GO:0032720 "negative regulation of tumor
necrosis factor production" evidence=IDA] InterPro:IPR001124
InterPro:IPR017942 InterPro:IPR017943 InterPro:IPR017954
Pfam:PF01273 Pfam:PF02886 PROSITE:PS00400 SMART:SM00328
SMART:SM00329 EMBL:CH471077 Reactome:REACT_6900 GO:GO:0005615
GO:GO:0050829 GO:GO:0050830 GO:GO:0006953
Pathway_Interaction_DB:il6_7pathway GO:GO:0005102 GO:GO:0045087
GO:GO:0006968 GO:GO:0032722 GO:GO:0032755 GO:GO:0032720
GO:GO:0044130 GO:GO:0032757 GO:GO:0032760 GO:GO:0008063
GO:GO:0001530 SUPFAM:SSF55394 eggNOG:NOG262970 HOGENOM:HOG000231250
HOVERGEN:HBG002797 OrthoDB:EOG4JDH6R GO:GO:0051636 GO:GO:0090023
GO:GO:0042535 GO:GO:0031663 GO:GO:0070891 GO:GO:0071223
GO:GO:0043032 GO:GO:0051637 GO:GO:0008228 GO:GO:0032490
GO:GO:0002281 CTD:3929 KO:K05399 EMBL:M35533 EMBL:X98657
EMBL:X98658 EMBL:X98659 EMBL:X98660 EMBL:X98661 EMBL:X98662
EMBL:X98663 EMBL:X98664 EMBL:X98665 EMBL:X98666 EMBL:X98667
EMBL:X98668 EMBL:AF013512 EMBL:AF013500 EMBL:AF013501 EMBL:AF013502
EMBL:AF013503 EMBL:AF013504 EMBL:AF013505 EMBL:AF013506
EMBL:AF013507 EMBL:AF013508 EMBL:AF013509 EMBL:AF013510
EMBL:AF013511 EMBL:AF105067 EMBL:AK313625 EMBL:AL080249 EMBL:L42172
IPI:IPI00032311 PIR:A35843 PIR:A54136 RefSeq:NP_004130.2
UniGene:Hs.154078 ProteinModelPortal:P18428 SMR:P18428 DIP:DIP-90N
IntAct:P18428 STRING:P18428 TCDB:1.C.40.1.2 PhosphoSite:P18428
DMDM:116242615 PaxDb:P18428 PeptideAtlas:P18428 PRIDE:P18428
Ensembl:ENST00000217407 GeneID:3929 KEGG:hsa:3929 UCSC:uc002xic.1
GeneCards:GC20P036974 HGNC:HGNC:6517 HPA:CAB025905 HPA:HPA001508
MIM:151990 neXtProt:NX_P18428 PharmGKB:PA30303 InParanoid:P18428
OMA:RNHRSPV PhylomeDB:P18428 GenomeRNAi:3929 NextBio:15427
ArrayExpress:P18428 Bgee:P18428 CleanEx:HS_LBP
Genevestigator:P18428 GermOnline:ENSG00000129988 GO:GO:0002232
GO:GO:0015920 GO:GO:0060265 GO:GO:0034145 Uniprot:P18428
Length = 481
Score = 177 (67.4 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 72/317 (22%), Positives = 127/317 (40%)
Query: 1 MGCFIKFSSPAILFMFLSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSI 60
MG + + P+IL L+LLL T + N G + A I+ KGL + + S +
Sbjct: 1 MGALAR-ALPSIL---LALLLTSTPEALGANPG--LVARITDKGLQYAAQEGLLALQSEL 54
Query: 61 IPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEI-DSSYVETGDPDLLLAVSGATADCGM 119
+ + LPD +IP +G+ ++ I+S E+ S+ L L++S ++
Sbjct: 55 LRITLPDFTGDLRIPHVGRGRYEFHSLNIHSCELLHSALRPVPGQGLSLSISDSSIRVQG 114
Query: 120 NWEYSYGSWLLPTISDSGAAXXXXXXXXXXXXXXXKEQGGIVKVILVDCGSHVRDISIKV 179
W+ + L D E G V C S + D+ + +
Sbjct: 115 RWKVRKSFFKLQGSFDVSVKGISISVNLLLGS----ESSGRPTVTASSCSSDIADVEVDM 170
Query: 180 DGGASWLYQALFEAFEGKIKSAVESAVTKKISELITK-LDSIFQSLPKQIPVSDIASMNT 238
G WL E K + +ES + + I + ++ L Q+LP + A ++
Sbjct: 171 SGDLGWLLNLFHNQIESKFQKVLESRICEMIQKSVSSDLQPYLQTLPVTTEIDSFADIDY 230
Query: 239 SFVRSPVLSDSSVEVEINGLFTAISGTSMLNYYHKGFESSASCSSPA---KMIGIQLNEN 295
S V +P + +EV G + S + +A S P KM+ +++
Sbjct: 231 SLVEAPRATAQMLEVMFKGEIFHRNHRSPVTLL------AAVMSLPEEHNKMVYFAISDY 284
Query: 296 VFSSGALVYFNSGTVVF 312
VF++ +LVY G + F
Sbjct: 285 VFNTASLVYHEEGYLNF 301
>ZFIN|ZDB-GENE-070912-360 [details] [associations]
symbol:si:dkey-11f4.4 "si:dkey-11f4.4" species:7955
"Danio rerio" [GO:0008289 "lipid binding" evidence=IEA]
InterPro:IPR001124 InterPro:IPR017942 InterPro:IPR017943
Pfam:PF01273 Pfam:PF02886 SMART:SM00328 SMART:SM00329
ZFIN:ZDB-GENE-070912-360 GO:GO:0008289 SUPFAM:SSF55394
GeneTree:ENSGT00620000087589 EMBL:CR753874 IPI:IPI00868005
ProteinModelPortal:E7FBG9 Ensembl:ENSDART00000121749 Uniprot:E7FBG9
Length = 472
Score = 172 (65.6 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 59/274 (21%), Positives = 108/274 (39%)
Query: 38 AVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEI-DS 96
A++S+K L + S + +PDI I IG V+ LS++ + E +
Sbjct: 22 ALLSEKALTDLSQMMPVWIQSKMKSTAIPDIHDQVDIG-IGWVNYVLSHMRVVQCETAEP 80
Query: 97 SYVETGDPDLLLAVSGATADCGMNWEYSYGSWLLPTISDSGAAXXXXXXXXXXXXXXXKE 156
S V L L V + W +G I+DSG+ +
Sbjct: 81 SLVFVEGTGLYLEVRELSLAVSGRWRTKFG-----IITDSGSFDVEVYNIYIRVVLGVGD 135
Query: 157 QGGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKISELITK 216
+ G + + C + V ++ I+ GG S+ YQ + F GK + + I + +T
Sbjct: 136 KDGHLSISSESCSNDVGNVYIQFHGGTSFFYQLFEDYFSGKASDMIRQKICPAIQQAVTN 195
Query: 217 LDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYYHKGFE 276
+++I Q IPV ++ +P ++D S +E+ F + S + + F+
Sbjct: 196 METILQERTVNIPVDKYVYLSAPLTSAPAVTDQSCRLEVKAEFYSRRSPSEPPFSARAFD 255
Query: 277 SSASCSSPAKMIGIQLNENVFSSGALVYFNSGTV 310
S M+ + ++ +S A Y SG +
Sbjct: 256 LQYS---DKHMLTLAASQFTVNSAAFAYLRSGAL 286
>UNIPROTKB|F1Q3J3 [details] [associations]
symbol:BPI "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043031 "negative regulation of macrophage
activation" evidence=IEA] [GO:0032720 "negative regulation of tumor
necrosis factor production" evidence=IEA] [GO:0032717 "negative
regulation of interleukin-8 production" evidence=IEA] [GO:0032715
"negative regulation of interleukin-6 production" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0001530
"lipopolysaccharide binding" evidence=IEA] InterPro:IPR001124
InterPro:IPR017942 InterPro:IPR017943 InterPro:IPR017954
Pfam:PF01273 Pfam:PF02886 PROSITE:PS00400 SMART:SM00328
SMART:SM00329 GO:GO:0005737 GO:GO:0032720 GO:GO:0032715
GO:GO:0032717 GO:GO:0001530 SUPFAM:SSF55394
GeneTree:ENSGT00620000087589 CTD:671 GO:GO:0043031 OMA:ARVQLYN
EMBL:AAEX03013925 RefSeq:XP_534417.2 Ensembl:ENSCAFT00000014136
GeneID:477226 KEGG:cfa:477226 Uniprot:F1Q3J3
Length = 485
Score = 170 (64.9 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 58/299 (19%), Positives = 126/299 (42%)
Query: 17 LSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPL 76
L L ++ T+A V G + A I++KGLD+ + + +++P S K+
Sbjct: 15 LVLAILGTAAVVTTTNPGVV-ARITQKGLDYACQQGVAVLQKELEKIKIPTFSGSFKVKH 73
Query: 77 IGKVHMALSNIIIYSVEIDSSYVE-TGDPDLLLAVSGATADCGMNWEYSYGSWLLPTISD 135
+GK H + +++I ++ SS ++ + L L++ A W+ + T +
Sbjct: 74 LGKGHYSFYSMVIRGFQLPSSQIKLVPNKGLDLSIRNANIKISGKWKARKN--FIKTSGN 131
Query: 136 SGAAXXXXXXXXXXXXXXXKEQGGIVKVILVDCGSHVRDISIKVDGGA-SWLYQALFEAF 194
+ G + +I C +++ + + + GG WL Q +
Sbjct: 132 FDLSVESISISAGLNMSFDPTSGHLT-IICSSCNNYIDSVRVHISGGRLGWLIQLFHKKI 190
Query: 195 EGKIKSAVESAVTKKISELIT-KLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEV 253
E I+ + + + + +S ++ +L S ++LP + IA ++ S V P + +++
Sbjct: 191 ESSIRKTMNNKICQVVSSSVSSRLQSYLKTLPVTYKIDRIAGISYSLVAPPTATADNLDG 250
Query: 254 EINGLFTAISGTSMLNYYHKGFESSASCSSPAK--MIGIQLNENVFSSGALVYFNSGTV 310
+ G F S+ + F A P M+ + +++ F++ LVY +G +
Sbjct: 251 HLKGEFF-----SLAHPRSPPFTPPAMALPPDHDHMVYLGISDYFFNTAGLVYQEAGAL 304
>UNIPROTKB|I3LFA0 [details] [associations]
symbol:BPI "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043031 "negative regulation of macrophage activation"
evidence=IEA] [GO:0032720 "negative regulation of tumor necrosis
factor production" evidence=IEA] [GO:0032717 "negative regulation
of interleukin-8 production" evidence=IEA] [GO:0032715 "negative
regulation of interleukin-6 production" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0001530 "lipopolysaccharide binding"
evidence=IEA] InterPro:IPR001124 InterPro:IPR017942
InterPro:IPR017943 Pfam:PF01273 Pfam:PF02886 SMART:SM00328
SMART:SM00329 GO:GO:0005737 GO:GO:0032720 GO:GO:0032715
GO:GO:0032717 GO:GO:0001530 SUPFAM:SSF55394
GeneTree:ENSGT00620000087589 GO:GO:0043031 OMA:ARVQLYN
EMBL:FP339579 Ensembl:ENSSSCT00000025172 Uniprot:I3LFA0
Length = 483
Score = 168 (64.2 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 61/297 (20%), Positives = 121/297 (40%)
Query: 17 LSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPL 76
++L + T+ N G I A I++KGLD+ + + + +P S KI
Sbjct: 15 VALAALGTAVTAAANPG--IVARITQKGLDYACQQGVATLRKELEKITIPTFSGSFKIKY 72
Query: 77 IGKVHMALSNIIIYSVEIDSSYVETG-DPDLLLAVSGATADCGMNWEYSYGSWLLPTISD 135
GK ++++ ++ +S + D L L++ A+ W+ + +++ S
Sbjct: 73 FGKGRYNFYSMVVREFKLPTSQIRLSPDQGLDLSIKDASVKISGKWK-AQKNFI--KASG 129
Query: 136 SGAAXXXXXXXXXXXXXXXKEQGGIVKVILVDCGSHVRDISIKVDGGA-SWLYQALFEAF 194
+ G V C SH+ + ++ G + WL Q
Sbjct: 130 NFDLSVEGISVLASLRLGYDPTSGHSTVSCSSCRSHINRVHVRTSGSSLKWLIQLFHRNI 189
Query: 195 EGKIKSAVESAVTKKISELIT-KLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEV 253
E ++ A+ES + K ++ ++ KL FQ+LP V + +N S V P S +++
Sbjct: 190 ESALRKAMESKICKMLTNTVSSKLQPYFQTLPVTAKVDRMVGINYSLVAPPKASAENLDG 249
Query: 254 EINGLFTAISGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGTV 310
+ G F ++ S + A +M+ + ++E F++ LVY +G +
Sbjct: 250 LLKGEFFSLDHPSPPPFAPPALALPADHD---RMVYLCISEYFFNTAGLVYQKAGVL 303
>UNIPROTKB|G3N2G9 [details] [associations]
symbol:G3N2G9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008289 "lipid binding" evidence=IEA]
InterPro:IPR001124 InterPro:IPR017942 InterPro:IPR017943
Pfam:PF01273 Pfam:PF02886 SMART:SM00328 GO:GO:0008289
SUPFAM:SSF55394 GeneTree:ENSGT00620000087589 EMBL:DAAA02036569
EMBL:DAAA02036568 OMA:TPFKGEF ProteinModelPortal:G3N2G9
Ensembl:ENSBTAT00000062921 Uniprot:G3N2G9
Length = 389
Score = 164 (62.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 65/307 (21%), Positives = 128/307 (41%)
Query: 15 MFLSLLLIPTSAHVQVNEG----GYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEK 70
M ++LLL+ + + EG G++ I+ KGL++ Y + + + ++LPD+
Sbjct: 1 MVVALLLL--AEFTRFGEGTPNPGFMVR-ITGKGLEYAHQYGVATLKNDLSTIKLPDLSG 57
Query: 71 SKKIPLIGKVHMALSNIIIYSVEIDSSYVETGDPDLLLA-VSGATADCGMNWEYSYGSWL 129
S I +G V+ S + I+ + +S + + A +S NW+
Sbjct: 58 SYGIGWLGSVNYVFSGMRIHHFLLRNSQLSLHPRQGIKASLSNNHVSVSGNWKVKKSFIT 117
Query: 130 LPTISDSGAAXXXXXXXXXXXXXXXKEQGGIVKVILVDCGSHVRDISIKVDGGASWLYQA 189
L D K+Q G V + C + + +SI++ G SW+
Sbjct: 118 LHGTFDLSV----DGMSVLVSLNLDKDQSGRPTVSVTHCHNFIGHVSIEISGHISWILNL 173
Query: 190 LFEAFEGKIKSAVESAVTKKISE-LITKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSD 248
E E +K+ +E + K + E ++L+ ++LP + IA ++ V +P ++
Sbjct: 174 FHERIENNVKNILEQKICKMVKESAASRLEPYLRTLPVTSMIDQIAGIDYRLVGAPQVTF 233
Query: 249 SSVEVEINGLFTAISGTSMLNYYHKGFESSASCSSPAK---MIGIQLNENVFSSGALVYF 305
++ G F + S + + + P K MI ++E VF++ + VY
Sbjct: 234 QGLDTPFKGEFFGRNWNSSVPF------DAPPIMLPQKHDHMIYFAVSEYVFNTASRVYH 287
Query: 306 NSGTVVF 312
+G + F
Sbjct: 288 QAGQMKF 294
>UNIPROTKB|F1MNN7 [details] [associations]
symbol:LBP "Lipopolysaccharide-binding protein"
species:9913 "Bos taurus" [GO:0090023 "positive regulation of
neutrophil chemotaxis" evidence=IEA] [GO:0071223 "cellular response
to lipoteichoic acid" evidence=IEA] [GO:0070891 "lipoteichoic acid
binding" evidence=IEA] [GO:0060265 "positive regulation of
respiratory burst involved in inflammatory response" evidence=IEA]
[GO:0051637 "Gram-positive bacterial cell surface binding"
evidence=IEA] [GO:0051636 "Gram-negative bacterial cell surface
binding" evidence=IEA] [GO:0050830 "defense response to
Gram-positive bacterium" evidence=IEA] [GO:0050829 "defense
response to Gram-negative bacterium" evidence=IEA] [GO:0045087
"innate immune response" evidence=IEA] [GO:0044130 "negative
regulation of growth of symbiont in host" evidence=IEA] [GO:0043032
"positive regulation of macrophage activation" evidence=IEA]
[GO:0042535 "positive regulation of tumor necrosis factor
biosynthetic process" evidence=IEA] [GO:0034145 "positive
regulation of toll-like receptor 4 signaling pathway" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032757 "positive regulation of
interleukin-8 production" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032722
"positive regulation of chemokine production" evidence=IEA]
[GO:0032720 "negative regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032490 "detection of molecule of
bacterial origin" evidence=IEA] [GO:0031663
"lipopolysaccharide-mediated signaling pathway" evidence=IEA]
[GO:0015920 "lipopolysaccharide transport" evidence=IEA]
[GO:0006953 "acute-phase response" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] [GO:0002281 "macrophage activation involved in immune
response" evidence=IEA] [GO:0002232 "leukocyte chemotaxis involved
in inflammatory response" evidence=IEA] [GO:0001530
"lipopolysaccharide binding" evidence=IEA] InterPro:IPR001124
InterPro:IPR017942 InterPro:IPR017943 InterPro:IPR017954
Pfam:PF01273 Pfam:PF02886 PROSITE:PS00400 SMART:SM00328
SMART:SM00329 GO:GO:0005615 GO:GO:0050829 GO:GO:0050830
GO:GO:0006953 GO:GO:0045087 GO:GO:0032722 GO:GO:0032755
GO:GO:0032720 GO:GO:0044130 GO:GO:0032757 GO:GO:0032760
GO:GO:0001530 SUPFAM:SSF55394 GeneTree:ENSGT00620000087589
GO:GO:0051636 GO:GO:0090023 GO:GO:0042535 GO:GO:0031663
GO:GO:0070891 GO:GO:0071223 GO:GO:0043032 GO:GO:0051637
GO:GO:0032490 GO:GO:0002281 IPI:IPI00730056 UniGene:Bt.24181
GO:GO:0002232 GO:GO:0015920 GO:GO:0060265 GO:GO:0034145 OMA:STRMIDM
EMBL:DAAA02036563 EMBL:DAAA02036564 EMBL:DAAA02036565
EMBL:DAAA02036566 EMBL:DAAA02036567 EMBL:DAAA02036568
Ensembl:ENSBTAT00000022428 Uniprot:F1MNN7
Length = 481
Score = 156 (60.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 59/300 (19%), Positives = 118/300 (39%)
Query: 15 MFLSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKI 74
+ L LL TS + N G + I+ +GL++ + S + + LPD +I
Sbjct: 11 LLLGTLLTFTSGGLGANPGLVVR--ITDQGLEYVAQEELLALQSKLHKVTLPDFNGDVRI 68
Query: 75 PLIGKVHMALSNIIIYSVEIDSSYVET-GDPDLLLAVSGATADCGMNWEYSYGSWLLPTI 133
G V ++ I S ++ S ++ + L ++S + +W+ L
Sbjct: 69 KHFGSVDYRFHSLNIQSCKLLGSALKLLPNQGLHFSISDSFIQVTGDWKVRKRILRL--- 125
Query: 134 SDSGAAXXXXXXXXXXXXXXXKEQGGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEA 193
D E G KV + C SH+RD+ + + G WL
Sbjct: 126 -DGSFDVKVKGITISVNLLLDSEPSGRPKVAVSSCSSHIRDVEVHISGDLGWLLNLFHNQ 184
Query: 194 FEGKIKSAVESAVTKKISELIT-KLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVE 252
E + + +ES + + I + +T +L Q+LP + +A ++ S + +P + ++
Sbjct: 185 IESRFRRVLESKICEIIEDSVTSELQPYLQTLPVTTEIDHLAGLDYSLMGAPQATAQMLD 244
Query: 253 VEINGLFTAISGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGTVVF 312
V G + + + S +M+ +++ F++ +LVY +G + F
Sbjct: 245 VMFKGEIFSRDDRFPVAFLAPVMNLPEEHS---RMVYFAISDYAFNTASLVYHKAGFLNF 301
>UNIPROTKB|Q2TBI0 [details] [associations]
symbol:LBP "Lipopolysaccharide-binding protein"
species:9913 "Bos taurus" [GO:0005576 "extracellular region"
evidence=IEA] [GO:0042742 "defense response to bacterium"
evidence=IEA] [GO:0006869 "lipid transport" evidence=IEA]
[GO:0008289 "lipid binding" evidence=IEA] InterPro:IPR001124
InterPro:IPR017942 InterPro:IPR017943 InterPro:IPR017954
Pfam:PF01273 Pfam:PF02886 PROSITE:PS00400 SMART:SM00328
SMART:SM00329 GO:GO:0005576 GO:GO:0006869 GO:GO:0042742
GO:GO:0008289 SUPFAM:SSF55394 eggNOG:NOG262970 HOGENOM:HOG000231250
HOVERGEN:HBG002797 OrthoDB:EOG4JDH6R EMBL:BC110172 IPI:IPI00730056
RefSeq:NP_001033763.1 UniGene:Bt.24181 ProteinModelPortal:Q2TBI0
STRING:Q2TBI0 PRIDE:Q2TBI0 GeneID:512242 KEGG:bta:512242 CTD:3929
InParanoid:Q2TBI0 KO:K05399 NextBio:20870298 Uniprot:Q2TBI0
Length = 481
Score = 156 (60.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 59/300 (19%), Positives = 118/300 (39%)
Query: 15 MFLSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKI 74
+ L LL TS + N G + I+ +GL++ + S + + LPD +I
Sbjct: 11 LLLGTLLTFTSGALGANPGLVVR--ITDQGLEYVAQEELLALQSKLHKVTLPDFNGDVRI 68
Query: 75 PLIGKVHMALSNIIIYSVEIDSSYVET-GDPDLLLAVSGATADCGMNWEYSYGSWLLPTI 133
G V ++ I S ++ S ++ + L ++S + +W+ L
Sbjct: 69 KHFGSVDYRFHSLNIQSCKLLGSALKLLPNQGLHFSISDSFIQVTGDWKVRKRILRL--- 125
Query: 134 SDSGAAXXXXXXXXXXXXXXXKEQGGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEA 193
D E G KV + C SH+RD+ + + G WL
Sbjct: 126 -DGSFDVKVKGITISVNLLLDSEPSGRPKVAVSSCSSHIRDVEVHISGDLGWLLNLFHNQ 184
Query: 194 FEGKIKSAVESAVTKKISELIT-KLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVE 252
E + + +ES + + I + +T +L Q+LP + +A ++ S + +P + ++
Sbjct: 185 IESRFRRVLESKICEIIEDSVTSELQPYLQTLPVTTEIDHLAGLDYSLMGAPQATAQMLD 244
Query: 253 VEINGLFTAISGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGTVVF 312
V G + + + S +M+ +++ F++ +LVY +G + F
Sbjct: 245 VMFKGEIFSRDDRFPVAFLAPVMNLPEEHS---RMVYFAISDYAFNTASLVYHKAGFLNF 301
>UNIPROTKB|F1NYJ8 [details] [associations]
symbol:F1NYJ8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008289 "lipid binding" evidence=IEA]
InterPro:IPR001124 InterPro:IPR017942 InterPro:IPR017943
Pfam:PF01273 Pfam:PF02886 SMART:SM00328 SMART:SM00329 GO:GO:0008289
SUPFAM:SSF55394 GeneTree:ENSGT00620000087589 EMBL:AADN02006278
IPI:IPI00600127 ProteinModelPortal:F1NYJ8
Ensembl:ENSGALT00000020578 OMA:ENICLNI Uniprot:F1NYJ8
Length = 480
Score = 146 (56.5 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 64/303 (21%), Positives = 126/303 (41%)
Query: 14 FMFLSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIE-KSK 72
+ FL LL ++ N G + I+++GLD+ + I S++ P +S
Sbjct: 12 YSFLPCLLF---LQLEANPG--LKVRITQRGLDYGRKIGIELLKQSVLKETFPSWSGQSF 66
Query: 73 KIPLIGKVHMALSNIIIYSVEI---DSSYVE-TGDPDLLLAVSGATADCGMNWEYSYGSW 128
++ + H A + +V+I +S++ TG + L+V+ A+A +W +W
Sbjct: 67 RMKQLHSNHYAAFLFKVDAVDIPETSASFIPGTG---VSLSVAHASATISADWRVK--AW 121
Query: 129 LLPTISDSGAAXXXXXXXXXXXXXXXKEQGGIVKVILVDCGSHVRDISIKVDGGASWLYQ 188
LL G ++ G + V+L C + + +K++ G+SW+Y
Sbjct: 122 LLK--DQGGFTLSISELFMAIVFQVSRDSTGHLSVLLHSCQLSIGSVKVKLNEGSSWIYS 179
Query: 189 ALFEAFEGKIKSAVESAVTKKISELITKLDSIFQSLPKQIPVSDI---ASMNTSFVRSPV 245
L E + S + + I I +D+ L KQ +S I A ++ S V SP
Sbjct: 180 FLSGFLEKAVHSKLNENICLNIKYKIQMMDA---QLRKQKVLSQIDAFAQIDYSLVSSPA 236
Query: 246 LSDSSVEVEINGLFTAISGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYF 305
+ S + +++ G + + + F+ +S M+ + ++ S L Y+
Sbjct: 237 VFKSHINLDLKGTVYPVGNHTDPPFVPAPFDLPNKINS---MLYLGVSNYFLKSATLAYY 293
Query: 306 NSG 308
+G
Sbjct: 294 RAG 296
>UNIPROTKB|P17453 [details] [associations]
symbol:BPI "Bactericidal permeability-increasing protein"
species:9913 "Bos taurus" [GO:0005576 "extracellular region"
evidence=IEA] [GO:0043031 "negative regulation of macrophage
activation" evidence=IEA] [GO:0032720 "negative regulation of tumor
necrosis factor production" evidence=IEA] [GO:0032717 "negative
regulation of interleukin-8 production" evidence=IEA] [GO:0032715
"negative regulation of interleukin-6 production" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0001530
"lipopolysaccharide binding" evidence=IEA] [GO:0042742 "defense
response to bacterium" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR001124 InterPro:IPR017942
InterPro:IPR017943 InterPro:IPR017954 Pfam:PF01273 Pfam:PF02886
PROSITE:PS00400 SMART:SM00328 SMART:SM00329 GO:GO:0005737
GO:GO:0005576 GO:GO:0016020 GO:GO:0042742 GO:GO:0032720
GO:GO:0032715 GO:GO:0032717 GO:GO:0001530 SUPFAM:SSF55394
eggNOG:NOG262970 EMBL:X52563 EMBL:BC102310 IPI:IPI00709341
PIR:S10180 RefSeq:NP_776320.1 UniGene:Bt.103
ProteinModelPortal:P17453 SMR:P17453 STRING:P17453 GeneID:280734
KEGG:bta:280734 CTD:671 HOGENOM:HOG000231250 HOVERGEN:HBG002797
InParanoid:P17453 OrthoDB:EOG4JDH6R NextBio:20804908
ArrayExpress:P17453 GO:GO:0043031 Uniprot:P17453
Length = 482
Score = 119 (46.9 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 36/149 (24%), Positives = 73/149 (48%)
Query: 168 CGSHVRDISIKVDGGA-SWLYQALFEAFEGKIKSAVESAVTKKISELIT-----KLDSIF 221
C S + + I + G + WL Q F +I+S ++ ++T+KI E++T KL F
Sbjct: 161 CSSGINTVRIHISGSSLGWLIQL----FRKRIESLLQKSMTRKICEVVTSTVSSKLQPYF 216
Query: 222 QSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYYHKGFESSASC 281
Q+LP + +A ++ S V P + ++++ + G F +++ S + A
Sbjct: 217 QTLPVTTKLDKVAGVDYSLVAPPRATANNLDWLLKGEFFSLAHRSPPPFAPPAL---AFP 273
Query: 282 SSPAKMIGIQLNENVFSSGALVYFNSGTV 310
S +M+ + ++E F++ VY +G +
Sbjct: 274 SDHDRMVYLGISEYFFNTAGFVYQKAGAL 302
Score = 66 (28.3 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 24/107 (22%), Positives = 48/107 (44%)
Query: 17 LSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPL 76
L +L ++A N G I A I++KGLD+ + + + +P+ + KI
Sbjct: 14 LVVLAALSTAVTTTNPG--IVARITQKGLDYACQQGVLTLQKELEKITIPNFSGNFKIKY 71
Query: 77 IGKVHMALSNIIIYSVEIDSSYVET-GDPDLLLAVSGATADCGMNWE 122
+GK + +++I + +S + D L L++ A+ W+
Sbjct: 72 LGKGQYSFFSMVIQGFNLPNSQIRPLPDKGLDLSIRDASIKIRGKWK 118
>MGI|MGI:3045315 [details] [associations]
symbol:Bpi "bactericidal permeablility increasing protein"
species:10090 "Mus musculus" [GO:0001530 "lipopolysaccharide
binding" evidence=ISO] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006955
"immune response" evidence=ISO] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0032715
"negative regulation of interleukin-6 production" evidence=ISO]
[GO:0032717 "negative regulation of interleukin-8 production"
evidence=ISO] [GO:0032720 "negative regulation of tumor necrosis
factor production" evidence=ISO] [GO:0042742 "defense response to
bacterium" evidence=ISO] [GO:0043031 "negative regulation of
macrophage activation" evidence=ISO] [GO:0051636 "Gram-negative
bacterial cell surface binding" evidence=ISO] InterPro:IPR001124
InterPro:IPR017942 InterPro:IPR017943 Pfam:PF01273 Pfam:PF02886
PROSITE:PS00400 SMART:SM00328 SMART:SM00329 MGI:MGI:3045315
GO:GO:0005737 GO:GO:0005576 GO:GO:0006955 GO:GO:0016020
GO:GO:0042742 GO:GO:0032720 GO:GO:0032715 GO:GO:0032717
GO:GO:0001530 SUPFAM:SSF55394 GeneTree:ENSGT00620000087589
eggNOG:NOG262970 CTD:671 HOGENOM:HOG000231250 HOVERGEN:HBG002797
OrthoDB:EOG4JDH6R GO:GO:0043031 OMA:ARVQLYN GO:GO:0051636
EMBL:AY853179 EMBL:AY648037 EMBL:AY363993 EMBL:AK033770
EMBL:AL663063 EMBL:BC118049 EMBL:BC118504 IPI:IPI00224637
IPI:IPI00753498 IPI:IPI00757749 RefSeq:NP_808518.1
UniGene:Mm.260883 HSSP:P17213 ProteinModelPortal:Q67E05 SMR:Q67E05
STRING:Q67E05 PhosphoSite:Q67E05 PRIDE:Q67E05
Ensembl:ENSMUST00000065039 Ensembl:ENSMUST00000109499
Ensembl:ENSMUST00000109500 GeneID:329547 KEGG:mmu:329547
UCSC:uc008npw.1 UCSC:uc008npx.1 InParanoid:Q8BSF3 NextBio:398832
Bgee:Q67E05 Genevestigator:Q67E05 Uniprot:Q67E05
Length = 483
Score = 141 (54.7 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 60/297 (20%), Positives = 119/297 (40%)
Query: 17 LSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPL 76
L LL I +A + G++ A+IS+KGLDF + + + + +PD KI
Sbjct: 14 LLLLAIIGTALTAATDPGFV-AMISQKGLDFACQQGVVELQKELQAISVPDFSGVFKIKH 72
Query: 77 IGKVHMALSNIIIYSVEIDSSYVETGDPD-LLLAVSGATADCGMNWEYSYGSWLLPTISD 135
+GK ++ + I + +E D L + + A+ W S ++L +
Sbjct: 73 LGKGSYEFYSMAVDGFHIPNPKIEMLPSDGLRVFIKDASIKINGKW-MSRKNFLK---AG 128
Query: 136 SGAAXXXXXXXXXXXXXXXKEQGGIVKVILVDCGSHVRDISIKVDGGA-SWLYQALFEAF 194
+ G + I +C SH+ + IK+ G WL +
Sbjct: 129 GNFELSIQGVSISTDLILGSDSSGHITTICSNCDSHIDSVHIKISGSMLGWLIRLFHRKI 188
Query: 195 EGKIKSAVESAVTKKISELIT-KLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEV 253
E +K+ + + K + + ++ KL ++L V D+ S++ S + ++ +E
Sbjct: 189 ETSLKNIIYKKICKIVRDSVSSKLQPYLKTLSVITRVDDVTSVDYSLLAPLTTTNQFLEG 248
Query: 254 EINGLFTAISGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGTV 310
++ G F L + + A M+ + +++ F++ L Y SGT+
Sbjct: 249 QLKGEFFWRGHRDPLPIHPPVMRF---VPNGAYMVCMGISDYFFNTEVLAYQQSGTL 302
>MGI|MGI:103151 [details] [associations]
symbol:Pltp "phospholipid transfer protein" species:10090
"Mus musculus" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006869 "lipid transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0010189
"vitamin E biosynthetic process" evidence=IMP] [GO:0030317 "sperm
motility" evidence=IMP] InterPro:IPR001124 InterPro:IPR017942
InterPro:IPR017943 InterPro:IPR017954 Pfam:PF01273 Pfam:PF02886
PROSITE:PS00400 SMART:SM00328 SMART:SM00329 MGI:MGI:103151
GO:GO:0005576 GO:GO:0006869 GO:GO:0008289 GO:GO:0030317
SUPFAM:SSF55394 GO:GO:0010189 CTD:5360 eggNOG:NOG290011
HOVERGEN:HBG103156 KO:K08761 EMBL:U37226 EMBL:U28960 EMBL:BC003782
IPI:IPI00135560 PIR:I49370 RefSeq:NP_035255.1 UniGene:Mm.6105
ProteinModelPortal:P55065 SMR:P55065 STRING:P55065
PhosphoSite:P55065 PaxDb:P55065 PRIDE:P55065
Ensembl:ENSMUST00000059954 Ensembl:ENSMUST00000109316 GeneID:18830
KEGG:mmu:18830 HOGENOM:HOG000231006 InParanoid:P55065 OMA:APPRCTI
OrthoDB:EOG43FGWR NextBio:295208 Bgee:P55065 CleanEx:MM_PLTP
Genevestigator:P55065 GermOnline:ENSMUSG00000017754 Uniprot:P55065
Length = 493
Score = 138 (53.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 62/303 (20%), Positives = 131/303 (43%)
Query: 15 MFLSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKI 74
+FL+LL AH ++ G I ++ LD K + + + +PD+ +K
Sbjct: 7 LFLALL---AGAHAEL-PGCKIR--VTSAALDLVKQEGLRFLEQELETITIPDVYGAK-- 58
Query: 75 PLIGKVHMALSNIIIYSVEIDSSYVE-TGDPDLLLAVSGATADCGMNWEYSYGSWLLPTI 133
G + +S++ + + + SS + D DLLL +S A+ G+++ W L
Sbjct: 59 ---GHFYYNISDVRVTQLHLISSELHFQPDQDLLLNISNASL--GLHFRRQLLYWFL--- 110
Query: 134 SDSGAAXXXXXXXXXXXXXX-XKEQGGIVKVILVDCGSHVRDISIKVDGGASWLYQALFE 192
D G ++ G +KV V C + V +++ GG ++ ++
Sbjct: 111 YDGGYINASAEGVSIRTGLQLSQDSSGRIKVSNVSCEASVSKMNMAF-GGT---FRRMYN 166
Query: 193 AFEGKIKSAVESAVTKKISELI-----TKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLS 247
F I S + + ++I ++ L+S+ ++P + V D+ ++ S ++ PV+S
Sbjct: 167 FFSTFITSGMRFLLNQQICPVLYHAGTVLLNSLLDTVPVRSSVDDLVGIDYSLLKDPVVS 226
Query: 248 DSSVEVEINGLFTAISGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNS 307
+ ++++E G F + + + ++ E +M+ + +E F S YF +
Sbjct: 227 NGNLDMEFRGAFFPLKEDNW-SLPNRAVEPQLE--DDERMVYVAFSEFFFDSAMESYFQA 283
Query: 308 GTV 310
G +
Sbjct: 284 GAL 286
>UNIPROTKB|E9PSP1 [details] [associations]
symbol:Pltp "Protein Pltp" species:10116 "Rattus
norvegicus" [GO:0008289 "lipid binding" evidence=IEA] [GO:0010189
"vitamin E biosynthetic process" evidence=IEA] [GO:0030317 "sperm
motility" evidence=IEA] InterPro:IPR001124 InterPro:IPR017942
InterPro:IPR017943 InterPro:IPR017954 Pfam:PF01273 Pfam:PF02886
PROSITE:PS00400 SMART:SM00328 SMART:SM00329 RGD:1306695
GO:GO:0008289 GO:GO:0030317 SUPFAM:SSF55394
GeneTree:ENSGT00620000087589 GO:GO:0010189 CTD:5360 KO:K08761
OMA:LEFNISA IPI:IPI00213172 RefSeq:NP_001162015.1 UniGene:Rn.117434
PRIDE:E9PSP1 Ensembl:ENSRNOT00000022594 GeneID:296371
KEGG:rno:296371 NextBio:641115 ArrayExpress:E9PSP1 Uniprot:E9PSP1
Length = 496
Score = 138 (53.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 65/305 (21%), Positives = 133/305 (43%)
Query: 15 MFLSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKI 74
+FL+LL AH ++ G I ++ L+ K + + + +PD+ +K
Sbjct: 7 LFLALL---AGAHAEL-PGCKIR--VTSAALELVKQEGLRFLEQELEDINIPDVYGAK-- 58
Query: 75 PLIGKVHMALSNIIIYSVEIDSSYVE-TGDPDLLLAVSGATADCGMNWEYSYGSWLLPTI 133
G + +S++ + +++ SS + D DLLL +S A+ G+++ W
Sbjct: 59 ---GHFYYNISDVKVTQLQLISSELHFQPDQDLLLNISNASL--GLHFRRQLLYWFF--- 110
Query: 134 SDSGAAXXXXXXXXXXXXXX-XKEQGGIVKVILVDCGSHVRDISIKVDGGASWLYQALFE 192
D G ++ G +KV V C + V I++ GG ++ ++
Sbjct: 111 YDGGYINASAEGVSIRTGLQLSRDPTGRIKVSNVSCEASVSKINMAF-GGT---FRRMYN 166
Query: 193 AFEGKIKSAVESAVTKKISELI-----TKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLS 247
F I S + + ++I ++ L+S+ ++P + V ++ ++ S ++ PV+S
Sbjct: 167 FFSTFITSGMRFLLNQQICPVLHHAGTVLLNSLLDTVPVRSSVDELVGIDYSLLKDPVVS 226
Query: 248 DSSVEVEINGLFTAIS-GT-SMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYF 305
+ ++++E G F + G S+LN K E +M+ + +E F S YF
Sbjct: 227 NGNLDMEFRGAFFPLKEGNWSLLN---KAVEPQLD--DDERMVYVAFSEFFFDSAMESYF 281
Query: 306 NSGTV 310
+G +
Sbjct: 282 QAGAL 286
>RGD|61865 [details] [associations]
symbol:Lbp "lipopolysaccharide binding protein" species:10116
"Rattus norvegicus" [GO:0001530 "lipopolysaccharide binding"
evidence=IEA;ISO] [GO:0002232 "leukocyte chemotaxis involved in
inflammatory response" evidence=IEA;ISO] [GO:0002281 "macrophage
activation involved in immune response" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IEA;ISO] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA;ISO] [GO:0006869 "lipid transport" evidence=IEA]
[GO:0006953 "acute-phase response" evidence=IEA;ISO] [GO:0008289
"lipid binding" evidence=IEA] [GO:0015920 "lipopolysaccharide
transport" evidence=IEA;ISO] [GO:0031663
"lipopolysaccharide-mediated signaling pathway" evidence=IEA;ISO]
[GO:0032490 "detection of molecule of bacterial origin"
evidence=IEA;ISO] [GO:0032496 "response to lipopolysaccharide"
evidence=ISO] [GO:0032720 "negative regulation of tumor necrosis
factor production" evidence=IEA;ISO] [GO:0032722 "positive
regulation of chemokine production" evidence=IEA;ISO] [GO:0032755
"positive regulation of interleukin-6 production" evidence=IEA;ISO]
[GO:0032757 "positive regulation of interleukin-8 production"
evidence=IEA;ISO] [GO:0032760 "positive regulation of tumor necrosis
factor production" evidence=IEA;ISO] [GO:0034145 "positive
regulation of toll-like receptor 4 signaling pathway"
evidence=IEA;ISO] [GO:0042535 "positive regulation of tumor necrosis
factor biosynthetic process" evidence=IEA;ISO] [GO:0042742 "defense
response to bacterium" evidence=IEA] [GO:0043032 "positive
regulation of macrophage activation" evidence=IEA;ISO] [GO:0044130
"negative regulation of growth of symbiont in host"
evidence=IEA;ISO] [GO:0045087 "innate immune response"
evidence=IEA;ISO] [GO:0050829 "defense response to Gram-negative
bacterium" evidence=IEA;ISO] [GO:0050830 "defense response to
Gram-positive bacterium" evidence=IEA;ISO] [GO:0051636
"Gram-negative bacterial cell surface binding" evidence=IEA;ISO]
[GO:0051637 "Gram-positive bacterial cell surface binding"
evidence=IEA;ISO] [GO:0060265 "positive regulation of respiratory
burst involved in inflammatory response" evidence=IEA;ISO]
[GO:0070891 "lipoteichoic acid binding" evidence=IEA;ISO]
[GO:0071222 "cellular response to lipopolysaccharide" evidence=ISO]
[GO:0071223 "cellular response to lipoteichoic acid"
evidence=IEA;ISO] [GO:0090023 "positive regulation of neutrophil
chemotaxis" evidence=IEA;ISO] InterPro:IPR001124 InterPro:IPR017942
InterPro:IPR017943 InterPro:IPR017954 Pfam:PF01273 Pfam:PF02886
PROSITE:PS00400 SMART:SM00328 SMART:SM00329 RGD:61865 GO:GO:0005615
GO:GO:0050829 GO:GO:0050830 GO:GO:0006953 GO:GO:0045087
GO:GO:0032722 GO:GO:0032755 GO:GO:0032720 GO:GO:0044130
GO:GO:0032757 GO:GO:0032760 GO:GO:0001530 SUPFAM:SSF55394
eggNOG:NOG262970 HOGENOM:HOG000231250 HOVERGEN:HBG002797
OrthoDB:EOG4JDH6R GO:GO:0051636 GO:GO:0090023 GO:GO:0042535
GO:GO:0031663 GO:GO:0070891 GO:GO:0071223 GO:GO:0043032
GO:GO:0051637 GO:GO:0032490 GO:GO:0002281 GO:GO:0002232
GO:GO:0015920 GO:GO:0060265 GO:GO:0034145 EMBL:L32132
IPI:IPI00207828 PIR:I56246 UniGene:Rn.48863
ProteinModelPortal:Q63313 STRING:Q63313 PRIDE:Q63313
InParanoid:Q63313 ArrayExpress:Q63313 Genevestigator:Q63313
GermOnline:ENSRNOG00000014532 Uniprot:Q63313
Length = 481
Score = 117 (46.2 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 33/151 (21%), Positives = 64/151 (42%)
Query: 168 CGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKISELITK-LDSIFQSLPK 226
C + +RD+ + V G WL E K++ +ES + + I + +T L Q+LP
Sbjct: 159 CSNRIRDLELHVSGNVGWLLNLFHNQIESKLQKVLESKICEMIQKSVTSDLQPYLQTLPV 218
Query: 227 QIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYYHKG--FESSASCSSP 284
+ I ++ S V +P +++V G + N H+ + + S P
Sbjct: 219 TADIDTILGIDYSLVAAPQAKAQTLDVMFKG--------EIFNRNHRSPVTTPTPTMSLP 270
Query: 285 A---KMIGIQLNENVFSSGALVYFNSGTVVF 312
+M+ +++ F+ VY +G + F
Sbjct: 271 EDSKQMVYFAISDQAFNIATRVYHQAGYLNF 301
Score = 61 (26.5 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 26/119 (21%), Positives = 49/119 (41%)
Query: 5 IKFSSPAILFMFLSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLE 64
+K ++ +L L LLL+ VN + I+ KGL++ + + +
Sbjct: 1 MKSATGPLLPTLLGLLLLSIPRTQGVNPAMVVR--ITDKGLEYAAKEGLLSLQRELYKIT 58
Query: 65 LPDIEKSKKIPLIGKVHMALSNIIIYSVEI-DSSYVETGDPDLLLAVSGATADCGMNWE 122
LPD KI +G+ ++ I S ++ SS L L++S ++ W+
Sbjct: 59 LPDFSGDFKIKAVGRGQYEFHSLEIQSCQLRGSSLKPLPGRGLSLSISDSSISVRGKWK 117
>UNIPROTKB|P17454 [details] [associations]
symbol:LBP "Lipopolysaccharide-binding protein"
species:9986 "Oryctolagus cuniculus" [GO:0001530
"lipopolysaccharide binding" evidence=IDA] [GO:0002281 "macrophage
activation involved in immune response" evidence=IDA] [GO:0005102
"receptor binding" evidence=IDA] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0006953 "acute-phase response" evidence=IDA]
[GO:0006968 "cellular defense response" evidence=IDA] [GO:0008228
"opsonization" evidence=IDA] [GO:0032760 "positive regulation of
tumor necrosis factor production" evidence=IDA] [GO:0043498 "cell
surface binding" evidence=IDA] [GO:0045087 "innate immune response"
evidence=IDA] [GO:0050829 "defense response to Gram-negative
bacterium" evidence=IDA] [GO:0051636 "Gram-negative bacterial cell
surface binding" evidence=IDA] InterPro:IPR001124
InterPro:IPR017942 InterPro:IPR017943 InterPro:IPR017954
Pfam:PF01273 Pfam:PF02886 PROSITE:PS00400 SMART:SM00328
SMART:SM00329 GO:GO:0005615 GO:GO:0006869 GO:GO:0050829
GO:GO:0006953 GO:GO:0005102 GO:GO:0045087 GO:GO:0006968
GO:GO:0032760 GO:GO:0001530 SUPFAM:SSF55394 eggNOG:NOG262970
HOGENOM:HOG000231250 HOVERGEN:HBG002797 OrthoDB:EOG4JDH6R
GO:GO:0051636 GO:GO:0008228 GO:GO:0002281 EMBL:M35534 PIR:B35843
UniGene:Ocu.2065 ProteinModelPortal:P17454 STRING:P17454
Uniprot:P17454
Length = 482
Score = 136 (52.9 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 56/294 (19%), Positives = 113/294 (38%)
Query: 17 LSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPL 76
LSLLL + N G + I+ KGL++ + ++ + LPD + +I
Sbjct: 14 LSLLLAAAPGALGTNPG--LITRITDKGLEYAAREGLLALQRKLLEVTLPDSDGDFRIKH 71
Query: 77 IGKVHMALSNIIIYSVEIDSSYVET-GDPDLLLAVSGATADCGMNWEYSYGSWLLPTISD 135
G+ ++ I E+ + L L +S A +W+ L D
Sbjct: 72 FGRAQYKFYSLKIPRFELLRGTLRPLPGQGLSLDISDAYIHVRGSWKVRKAFLRLKNSFD 131
Query: 136 SGAAXXXXXXXXXXXXXXXKEQGGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEAFE 195
E G V C S ++++ + ++G L L +
Sbjct: 132 ----LYVKGLTISVHLVLGSESSGRPTVTTSSCSSDIQNVELDIEGDLEELLNLLQSQID 187
Query: 196 GKIKSAVESAVTKKISELITK-LDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVE 254
+++ +ES + ++I E +T L Q+LP + A ++ S + +P + ++V
Sbjct: 188 ARLREVLESKICRQIEEAVTAHLQPYLQTLPVTTQIDSFAGIDYSLMEAPRATAGMLDVM 247
Query: 255 INGLFTAISGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSG 308
G + S +++ + S +M+ +++ VF++ +L Y SG
Sbjct: 248 FKGEIFPLDHRSPVDFLAPAMNLPEAHS---RMVYFSISDYVFNTASLAYHKSG 298
>MGI|MGI:1098776 [details] [associations]
symbol:Lbp "lipopolysaccharide binding protein"
species:10090 "Mus musculus" [GO:0001530 "lipopolysaccharide
binding" evidence=ISO;IDA] [GO:0002232 "leukocyte chemotaxis
involved in inflammatory response" evidence=IMP] [GO:0002281
"macrophage activation involved in immune response" evidence=IDA]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0006869 "lipid transport" evidence=IEA] [GO:0006953
"acute-phase response" evidence=IMP] [GO:0008228 "opsonization"
evidence=IC] [GO:0008289 "lipid binding" evidence=IEA] [GO:0015920
"lipopolysaccharide transport" evidence=ISO] [GO:0031663
"lipopolysaccharide-mediated signaling pathway" evidence=ISO]
[GO:0032490 "detection of molecule of bacterial origin"
evidence=ISO] [GO:0032496 "response to lipopolysaccharide"
evidence=ISO;IMP] [GO:0032720 "negative regulation of tumor
necrosis factor production" evidence=ISO] [GO:0032722 "positive
regulation of chemokine production" evidence=IMP] [GO:0032755
"positive regulation of interleukin-6 production" evidence=ISO]
[GO:0032757 "positive regulation of interleukin-8 production"
evidence=ISO] [GO:0032760 "positive regulation of tumor necrosis
factor production" evidence=ISO;IDA;IMP] [GO:0034145 "positive
regulation of toll-like receptor 4 signaling pathway" evidence=ISO]
[GO:0042535 "positive regulation of tumor necrosis factor
biosynthetic process" evidence=IMP] [GO:0042742 "defense response
to bacterium" evidence=IEA] [GO:0043032 "positive regulation of
macrophage activation" evidence=ISO] [GO:0044130 "negative
regulation of growth of symbiont in host" evidence=IMP] [GO:0045087
"innate immune response" evidence=IMP] [GO:0050829 "defense
response to Gram-negative bacterium" evidence=IMP] [GO:0050830
"defense response to Gram-positive bacterium" evidence=IMP]
[GO:0051636 "Gram-negative bacterial cell surface binding"
evidence=ISO] [GO:0051637 "Gram-positive bacterial cell surface
binding" evidence=ISO;IDA] [GO:0060265 "positive regulation of
respiratory burst involved in inflammatory response" evidence=IMP]
[GO:0070891 "lipoteichoic acid binding" evidence=ISO] [GO:0071222
"cellular response to lipopolysaccharide" evidence=ISO] [GO:0071223
"cellular response to lipoteichoic acid" evidence=ISO] [GO:0090023
"positive regulation of neutrophil chemotaxis" evidence=IMP]
InterPro:IPR001124 InterPro:IPR017942 InterPro:IPR017943
InterPro:IPR017954 Pfam:PF01273 Pfam:PF02886 PROSITE:PS00400
SMART:SM00328 SMART:SM00329 MGI:MGI:1098776 GO:GO:0005615
GO:GO:0050829 GO:GO:0050830 GO:GO:0006953 GO:GO:0032496
GO:GO:0005102 GO:GO:0045087 GO:GO:0032722 GO:GO:0032755
EMBL:CH466551 GO:GO:0032720 GO:GO:0044130 GO:GO:0032757
GO:GO:0032760 GO:GO:0001530 SUPFAM:SSF55394
GeneTree:ENSGT00620000087589 eggNOG:NOG262970 HOGENOM:HOG000231250
HOVERGEN:HBG002797 OrthoDB:EOG4JDH6R GO:GO:0051636 EMBL:AL663063
GO:GO:0090023 GO:GO:0042535 GO:GO:0031663 GO:GO:0070891
GO:GO:0071223 GO:GO:0043032 GO:GO:0051637 GO:GO:0008228
GO:GO:0032490 GO:GO:0002281 CTD:3929 KO:K05399 OMA:RNHRSPV
GO:GO:0002232 GO:GO:0015920 GO:GO:0060265 GO:GO:0034145 EMBL:X99347
EMBL:BC004795 IPI:IPI00126060 RefSeq:NP_032515.2 UniGene:Mm.218846
ProteinModelPortal:Q61805 SMR:Q61805 STRING:Q61805
PhosphoSite:Q61805 PaxDb:Q61805 PRIDE:Q61805
Ensembl:ENSMUST00000016168 GeneID:16803 KEGG:mmu:16803
InParanoid:A2AC66 ChiTaRS:LBP NextBio:290688 Bgee:Q61805
CleanEx:MM_LBP Genevestigator:Q61805 GermOnline:ENSMUSG00000016024
Uniprot:Q61805
Length = 481
Score = 135 (52.6 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 62/315 (19%), Positives = 118/315 (37%)
Query: 5 IKFSSPAILFMFLSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLE 64
+K + +L L LL + VN G + A I+ KGL + + + +
Sbjct: 1 MKAGTGPLLSTLLGLLFLSIQGTGGVNPG--VVARITDKGLAYAAKEGLVALQRELYKIT 58
Query: 65 LPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYVET-GDPDLLLAVSGATADCGMNWEY 123
LPD KI +G+ ++ I + E+ S ++ L LA+S ++ W+
Sbjct: 59 LPDFSGDFKIKAVGRGQYEFHSLEIQNCELRGSSLKLLPGQGLSLAISDSSIGVRGKWKV 118
Query: 124 SYGSWLLPTISDSGAAXXXXXXXXXXXXXXXKEQGGIVKVILVDCGSHVRDISIKVDGGA 183
L D + G V C S + D+ + + G
Sbjct: 119 RKSFLKLHGSFDLDVKGVTISVDLLLGM----DPSGRPTVSASGCSSRICDLDVHISGNV 174
Query: 184 SWLYQALFEAFEGKIKSAVESAVTKKISELITK-LDSIFQSLPKQIPVSDIASMNTSFVR 242
WL E K++ +E+ V + I + +T L Q+LP + ++ ++ S V
Sbjct: 175 GWLLNLFHNQIESKLQKVLENKVCEMIQKSVTSDLQPYLQTLPVTAEIDNVLGIDYSLVA 234
Query: 243 SPVLSDSSVEVEINGLFTAISGTSMLNYYHKG--FESSASCSSPA---KMIGIQLNENVF 297
+P ++V G + N H+ + + S P +M+ +++ F
Sbjct: 235 APQAKAQVLDVMFKG--------EIFNRNHRSPVATPTPTMSLPEDSKQMVYFAISDYAF 286
Query: 298 SSGALVYFNSGTVVF 312
+ + VY +G + F
Sbjct: 287 NIASRVYHQAGYLNF 301
>UNIPROTKB|E2QW61 [details] [associations]
symbol:LBP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008289 "lipid binding" evidence=IEA]
InterPro:IPR017942 InterPro:IPR017943 InterPro:IPR017954
Pfam:PF01273 PROSITE:PS00400 SMART:SM00328 GO:GO:0008289
SUPFAM:SSF55394 GeneTree:ENSGT00620000087589 EMBL:AAEX03013925
Ensembl:ENSCAFT00000039771 OMA:TIFYELE Uniprot:E2QW61
Length = 247
Score = 126 (49.4 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 45/216 (20%), Positives = 80/216 (37%)
Query: 15 MFLSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKI 74
+ L LL + N G + I+ KGL++ + ++ + LPD KI
Sbjct: 11 LLLRFLLTSIPGALGTNPGLVVR--ITDKGLEYVAKEGLVALQKKLLSITLPDFAGDFKI 68
Query: 75 PLIGKVHMALSNIIIYSVEI-DSSYVETGDPDLLLAVSGATADCGMNWEYSYGSWLLPTI 133
IG+ H ++ ++S E+ S+ L L +S + W+ L
Sbjct: 69 KPIGRGHYDFHSLSVHSCELRGSALTPLPSQGLSLTISDSFIRVQGEWKARKAFVKLQGS 128
Query: 134 SDSGAAXXXXXXXXXXXXXXXKEQGGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEA 193
D +E G V C SH++D+ + + G WL
Sbjct: 129 FD----VQVKGITISVNLVLGREPSGRPTVAASSCSSHIQDVEVDISGDLGWLMNLFHNQ 184
Query: 194 FEGKIKSAVESAVTKKISELITK-LDSIFQSLPKQI 228
E K +ES + + + + +T L Q+LP ++
Sbjct: 185 IESKFCRVLESKICEMLQKSVTSDLQPYLQTLPGRL 220
>ZFIN|ZDB-GENE-040801-22 [details] [associations]
symbol:pltp "phospholipid transfer protein"
species:7955 "Danio rerio" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001124
InterPro:IPR017942 InterPro:IPR017943 InterPro:IPR017954
Pfam:PF01273 Pfam:PF02886 PROSITE:PS00400 SMART:SM00328
SMART:SM00329 ZFIN:ZDB-GENE-040801-22 GO:GO:0008289 SUPFAM:SSF55394
GeneTree:ENSGT00620000087589 CTD:5360 eggNOG:NOG290011
HOVERGEN:HBG103156 KO:K08761 HOGENOM:HOG000231006 OrthoDB:EOG43FGWR
EMBL:CABZ01075938 EMBL:CABZ01075939 EMBL:CU638700 EMBL:BC077135
IPI:IPI00496332 RefSeq:NP_001003519.1 UniGene:Dr.33963
Ensembl:ENSDART00000051901 GeneID:445125 KEGG:dre:445125
InParanoid:Q6DEI0 NextBio:20831889 Uniprot:Q6DEI0
Length = 486
Score = 130 (50.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 50/273 (18%), Positives = 112/273 (41%)
Query: 40 ISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYV 99
I+KKGL+ K + + +P+++ S+ G+ ++N+ I + + S
Sbjct: 29 ITKKGLEMLKAETKKFVEEELSNITMPEMQGSE-----GRFQYTINNVRIIELNLASDLR 83
Query: 100 ETGDPDLLLAVSGATADCGMNWEYSYGSWLLPTISDSGAAXXXXXXXXXXXXXX-XKEQG 158
D LL V ++ +N++ WL D GA K+
Sbjct: 84 FQPDVGLLFEVQNSSIT--LNFQRRILYWLF---YDEGAINASAEGVNIFTVLHLSKDDE 138
Query: 159 GIVKVILVDCGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKISEL-ITKL 217
G +K+ V C + + + K G +Y + ++ + + ++ + +
Sbjct: 139 GRLKISNVTCDASIAKMRAKFSGTLGRVYDFIGTFLTTGMRFLLNKRICPVLNHAALVSV 198
Query: 218 DSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTS--MLNYYHKGF 275
+ + +++P + V ++ S + PV++++S++++ G+F + + ++NY
Sbjct: 199 NQLLETIPVRAQVDSYIGIDYSLLSDPVVTETSLDMDFRGMFYDLKNENDTLVNY----- 253
Query: 276 ESSASCSSPAKMIGIQLNENVFSSGALVYFNSG 308
+ +MI + L+E F SG YF G
Sbjct: 254 AVNPVVREYDRMIYLALSEYFFDSGLYSYFKGG 286
>UNIPROTKB|F1MQ17 [details] [associations]
symbol:BPI "Bactericidal permeability-increasing protein"
species:9913 "Bos taurus" [GO:0043031 "negative regulation of
macrophage activation" evidence=IEA] [GO:0032720 "negative
regulation of tumor necrosis factor production" evidence=IEA]
[GO:0032717 "negative regulation of interleukin-8 production"
evidence=IEA] [GO:0032715 "negative regulation of interleukin-6
production" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0001530 "lipopolysaccharide binding" evidence=IEA]
InterPro:IPR001124 InterPro:IPR017942 InterPro:IPR017943
Pfam:PF01273 Pfam:PF02886 SMART:SM00328 SMART:SM00329 GO:GO:0005737
GO:GO:0032720 GO:GO:0032715 GO:GO:0032717 GO:GO:0001530
SUPFAM:SSF55394 GeneTree:ENSGT00620000087589 IPI:IPI00709341
GO:GO:0043031 EMBL:DAAA02036561 EMBL:DAAA02036562
ProteinModelPortal:F1MQ17 Ensembl:ENSBTAT00000018669 OMA:LFLLEMN
ArrayExpress:F1MQ17 Uniprot:F1MQ17
Length = 440
Score = 119 (46.9 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 36/149 (24%), Positives = 73/149 (48%)
Query: 168 CGSHVRDISIKVDGGA-SWLYQALFEAFEGKIKSAVESAVTKKISELIT-----KLDSIF 221
C S + + I + G + WL Q F +I+S ++ ++T+KI E++T KL F
Sbjct: 119 CSSGINTVRIHISGSSLGWLIQL----FRKRIESLLQKSMTRKICEVVTSTVSSKLQPYF 174
Query: 222 QSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYYHKGFESSASC 281
Q+LP + +A ++ S V P + ++++ + G F +++ S + A
Sbjct: 175 QTLPVTTKLDKVAGVDYSLVAPPRATANNLDWLLKGEFFSLAHRSPPPFAPPAL---AFP 231
Query: 282 SSPAKMIGIQLNENVFSSGALVYFNSGTV 310
S +M+ + ++E F++ VY +G +
Sbjct: 232 SDHDRMVYLGISEYFFNTAGFVYQKAGAL 260
Score = 44 (20.5 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 12/61 (19%), Positives = 28/61 (45%)
Query: 63 LELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYVET-GDPDLLLAVSGATADCGMNW 121
+ +P+ + KI +GK + +++I + +S + D L L++ A+ W
Sbjct: 16 ITIPNFSGNFKIKYLGKGQYSFFSMVIQGFNLPNSQIRPLPDKGLDLSIRDASIKIRGKW 75
Query: 122 E 122
+
Sbjct: 76 K 76
>DICTYBASE|DDB_G0280281 [details] [associations]
symbol:DDB_G0280281 species:44689 "Dictyostelium
discoideum" [GO:0008289 "lipid binding" evidence=IEA]
InterPro:IPR017942 InterPro:IPR017943 Pfam:PF01273
dictyBase:DDB_G0280281 EMBL:AAFI02000035 GO:GO:0008289
SUPFAM:SSF55394 RefSeq:XP_641350.1 ProteinModelPortal:Q54VK5
EnsemblProtists:DDB0206489 GeneID:8622484 KEGG:ddi:DDB_G0280281
eggNOG:NOG243659 InParanoid:Q54VK5 OMA:ALIGECK Uniprot:Q54VK5
Length = 611
Score = 125 (49.1 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 61/241 (25%), Positives = 103/241 (42%)
Query: 35 YISAVISKKGL-DFFKNY--LINKATSSIIPLELPDIEKSKKIPLIGKVHMA----LSNI 87
+IS V SK+ L DF K I + ++I+P + K + IP + + LSN+
Sbjct: 339 FISEVKSKEQLIDFLKQNKDFIKEIKNTIVPFITDQLLKVQ-IPTVNGITKGFKYELSNL 397
Query: 88 IIYSVEI--DSSYVETGDPDLLLA-VSGATADCGMNWEYSYGSWLLPTISDSGAAXXX-- 142
+ + I + VE + + + A VSG TA N+ +SY P + D G A
Sbjct: 398 VFAGLNIPPEGVDVEFSETNSITASVSGFTAQL-KNFSWSYKQEGFPYLKDQGLASANCQ 456
Query: 143 XXXXXXXXXXXXKEQGGIVKVILVDCGSHVRDISIKVD--GGASWLYQALFEAFEGKIKS 200
++ ++ + + + ++ + V G WLY L F IK
Sbjct: 457 KGFTSLTFDIETNKETNTPEIKITNIVFKIENLEVLVQESGKVKWLYNYLISKFSESIKE 516
Query: 201 AVES----AVTKKISELITKLDSIF-QSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEI 255
VE+ +T I+ L TK++ I Q K I S N++ + SP S++ + E+
Sbjct: 517 VVENKIKGTITGHINTLSTKINQIVGQYWNKLIDKIKSPSSNST-LNSPSQSENKI-TEL 574
Query: 256 N 256
N
Sbjct: 575 N 575
>UNIPROTKB|F1NXX9 [details] [associations]
symbol:BPI "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008289 "lipid binding" evidence=IEA]
InterPro:IPR001124 InterPro:IPR017942 InterPro:IPR017943
Pfam:PF01273 Pfam:PF02886 SMART:SM00328 SMART:SM00329 GO:GO:0005615
GO:GO:0006953 GO:GO:0045087 GO:GO:0032722 GO:GO:0032755
GO:GO:0032720 GO:GO:0044130 GO:GO:0032757 GO:GO:0032760
GO:GO:0001530 SUPFAM:SSF55394 GeneTree:ENSGT00620000087589
GO:GO:0051636 GO:GO:0090023 GO:GO:0042535 GO:GO:0070891
GO:GO:0043032 GO:GO:0051637 GO:GO:0002281 GO:GO:0002232
GO:GO:0015920 GO:GO:0060265 GO:GO:0034145 OMA:SGTTCNL
EMBL:AADN02019061 EMBL:AADN02019062 IPI:IPI00596947
ProteinModelPortal:F1NXX9 Ensembl:ENSGALT00000010917 Uniprot:F1NXX9
Length = 361
Score = 117 (46.2 bits), Expect = 0.00026, P = 0.00026
Identities = 32/151 (21%), Positives = 65/151 (43%)
Query: 168 CGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKI-SELITKLDSIFQSLPK 226
C + + + + G WLY + A E + + +E V + S + L Q+LP
Sbjct: 36 CSTRISSVHVHFSGKFGWLYNLFYSAVESRFRKILEGKVCDSVVSSVNGDLQRYLQTLPV 95
Query: 227 QIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYYHKG---FESSASCSS 283
+ A ++ S V P ++ +++V++ G F +++ H+G F+ A
Sbjct: 96 TAKIDAKAGIDYSLVAPPAATEQTLDVDLKGEFFSLA--------HRGAVPFQPPALALP 147
Query: 284 PA--KMIGIQLNENVFSSGALVYFNSGTVVF 312
P +M+ + F++ Y +G +VF
Sbjct: 148 PDHDRMVYFGASSYFFNTAGFAYHAAGALVF 178
>UNIPROTKB|F1P8V0 [details] [associations]
symbol:PLTP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008289 "lipid binding" evidence=IEA]
InterPro:IPR001124 InterPro:IPR017942 InterPro:IPR017943
InterPro:IPR017954 Pfam:PF01273 Pfam:PF02886 PROSITE:PS00400
SMART:SM00328 SMART:SM00329 GO:GO:0008289 SUPFAM:SSF55394
GeneTree:ENSGT00620000087589 OMA:APPRCTI EMBL:AAEX03013975
Ensembl:ENSCAFT00000015623 Uniprot:F1P8V0
Length = 514
Score = 119 (46.9 bits), Expect = 0.00027, P = 0.00027
Identities = 57/306 (18%), Positives = 125/306 (40%)
Query: 10 PAILFMFLSLLL-IPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDI 68
P + +F +LLL + AH ++ G I ++ K LD K + + + +PD+
Sbjct: 17 PLAMALFGALLLALLAGAHAEL-PGCKIR--VTSKALDLVKQEGLRFLEQELETITIPDL 73
Query: 69 EKSKKIPLIGKVHMALSNIIIYSVEIDSS--YVETGDPDLLLAVSGATADCGMNWEYSYG 126
+ G + +S + + +++ SS + + G +L+L +S A+ G+ +
Sbjct: 74 RGRE-----GHFYYNISEVKVTELQLTSSELHFQPGQ-ELVLQISNASL--GLRFRRQLL 125
Query: 127 SWLLPTISDSGAAXXXXXXXXXXXXXXXK-EQGGIVKVILVDCGSHVRDISIKVDGGASW 185
W D G + G +KV V C + V + G
Sbjct: 126 YWFF---YDGGYINASAEGVSIRTALELSGDPTGRIKVSNVSCQASVSRMHAAFGGTFKK 182
Query: 186 LYQALFEAFEGKIKSAVESAVTKKISEL-ITKLDSIFQSLPKQIPVSDIASMNTSFVRSP 244
+Y+ L ++ + + + + L+S+ ++P + V D+ ++ S ++ P
Sbjct: 183 VYEFLSTFITSGMRFLLNQQICPVLYHAGMVLLNSLLDTVPVRSSVDDLVGIDYSLLKDP 242
Query: 245 VLSDSSVEVEINGLFTAISGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVY 304
V S S+++++ G F ++ + + ++ E +M+ + +E F S Y
Sbjct: 243 VASTSNLDMDFRGAFFPLAERNW-SLPNRAVEPQLQ--EEERMVYVAFSEFFFDSAMESY 299
Query: 305 FNSGTV 310
F +G +
Sbjct: 300 FRAGAL 305
>UNIPROTKB|E1C2X7 [details] [associations]
symbol:E1C2X7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008289 "lipid binding" evidence=IEA]
InterPro:IPR001124 InterPro:IPR017942 InterPro:IPR017943
InterPro:IPR017954 Pfam:PF01273 Pfam:PF02886 PROSITE:PS00400
SMART:SM00328 SMART:SM00329 GO:GO:0008289 SUPFAM:SSF55394
GeneTree:ENSGT00620000087589 EMBL:AADN02006278 IPI:IPI00585627
ProteinModelPortal:E1C2X7 Ensembl:ENSGALT00000037742 OMA:NISTEMF
Uniprot:E1C2X7
Length = 444
Score = 118 (46.6 bits), Expect = 0.00029, P = 0.00029
Identities = 64/300 (21%), Positives = 122/300 (40%)
Query: 18 SLLLIPT-SAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPL 76
SLLL+ S ++ N G + I++K L++ K + ++ + PD+ ++ L
Sbjct: 7 SLLLLSLLSVQLKANPG--LKVRITQKALEYAKKVGVEILKKNMEKEQFPDLIGYERFGL 64
Query: 77 IGKVHMALSNIIIYSVE---IDSSYVETGDPDLLLAVSGATADCGMNWEYSYGSWLLPTI 133
G VH +S I + +VE + S + L++ + T D MNW +W+
Sbjct: 65 -GNVHYNISRIRVTAVEFPNVSISLIPRSGVKLVIRNASLTID--MNWNIR--TWMF--- 116
Query: 134 SDSGAAXXXXXXXXXXXXXXXK-EQGGIVKVILVDCGSHVRDISIKVDGG----ASWLYQ 188
D G + + G V L C + D IKV+G +SW+
Sbjct: 117 KDGGRSTVHISKVFVTATFSTPLDSIGHTSVSLSSCHTTSGDTDIKVNGKNKMWSSWMQL 176
Query: 189 ALFEAFEGKIKSAVESAVTKKISELITKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSD 248
+K+ S V + +S +TK SI ++P + + D+A ++ S + S +
Sbjct: 177 GAL-LLGSSLKNTCNSEVLQMLSCCLTKKPSI-GTVP--VRIDDLAEIDYS-LNSLEVFR 231
Query: 249 SSVEVEINGLFTAISGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSG 308
+++++ G+ + Y F S M+ + +E F + Y+ +G
Sbjct: 232 PYIDMDLKGIVYPAGNYTGPPYVATPFAIPDQNDS---MLYLAFSEYFFQTSLFSYYTAG 288
>UNIPROTKB|F1P0T1 [details] [associations]
symbol:CETP "Cholesteryl ester transfer protein"
species:9031 "Gallus gallus" [GO:0043691 "reverse cholesterol
transport" evidence=IEA] [GO:0017127 "cholesterol transporter
activity" evidence=IEA] [GO:0034364 "high-density lipoprotein
particle" evidence=IEA] [GO:0005548 "phospholipid transporter
activity" evidence=IEA] [GO:0006641 "triglyceride metabolic
process" evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0010874 "regulation of cholesterol efflux"
evidence=IEA] [GO:0015485 "cholesterol binding" evidence=IEA]
[GO:0017129 "triglyceride binding" evidence=IEA] [GO:0031210
"phosphatidylcholine binding" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0034372 "very-low-density lipoprotein particle
remodeling" evidence=IEA] [GO:0034374 "low-density lipoprotein
particle remodeling" evidence=IEA] [GO:0034375 "high-density
lipoprotein particle remodeling" evidence=IEA] [GO:0042632
"cholesterol homeostasis" evidence=IEA] [GO:0046470
"phosphatidylcholine metabolic process" evidence=IEA] [GO:0055091
"phospholipid homeostasis" evidence=IEA] [GO:0070328 "triglyceride
homeostasis" evidence=IEA] InterPro:IPR001124 InterPro:IPR017130
InterPro:IPR017942 InterPro:IPR017943 Pfam:PF01273 Pfam:PF02886
PIRSF:PIRSF037185 SMART:SM00328 SMART:SM00329 GO:GO:0046470
GO:GO:0008203 GO:GO:0015485 GO:GO:0017127 GO:GO:0005548
GO:GO:0042632 GO:GO:0055091 GO:GO:0043691 GO:GO:0031210
GO:GO:0006641 GO:GO:0070328 GO:GO:0031982 GO:GO:0034364
GO:GO:0017129 SUPFAM:SSF55394 IPI:IPI00600735
PANTHER:PTHR10504:SF12 OMA:PKISCQN GO:GO:0010874 EMBL:AADN02065764
Ensembl:ENSGALT00000001871 GeneTree:ENSGT00390000008226
Uniprot:F1P0T1
Length = 505
Score = 116 (45.9 bits), Expect = 0.00058, P = 0.00058
Identities = 54/269 (20%), Positives = 109/269 (40%)
Query: 52 LINKATSSIIPL-----ELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYVETGDPDL 106
L+N+ T+ +I + P+I + + +G V L+NI + + I+ S VE + D
Sbjct: 48 LLNQETARLIQAAFKNAKFPNITGERSMRFLGTVAYTLANIQVSDLSIEQSEVELKENDA 107
Query: 107 L-LAVSGATADCGMNWEYSY-GSWLLPTISDSGAAXXXXXXXXXXXXXXXKEQGGIVKVI 164
+ +A+ TA Y Y G+W L +E+ V
Sbjct: 108 IDIAIKNVTAFFRGTLTYGYAGAWFLQLFHSVDFEIQSSIDLQINIKLLCQEEQ--VAAD 165
Query: 165 LVDC--GSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKISELITKLDSIFQ 222
DC H + ++ D WL Q + +K ++ + K+I+ L + +
Sbjct: 166 ASDCYLSFHKLMLHLQGDKEPGWLKQLFTDFISFTLKFVLKRELCKEINLLAQVMANFVH 225
Query: 223 SLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYYHKGFESSASCS 282
++ + + ++ S P++ + +E GL + + +L+ F S S
Sbjct: 226 NVAENFVQDEAIGLDISLASDPLIKANYLESHHKGLVLYKNYSDVLS--DSVF--SPSLL 281
Query: 283 SPAKMIGIQLNENVFSSGALVYFNSGTVV 311
S ++M+ ++E++ +S A F G +V
Sbjct: 282 SESRMLYFWISEHILNSLASAAFLDGRLV 310
>UNIPROTKB|Q3V6R6 [details] [associations]
symbol:CETP "Cholesteryl ester transfer protein"
species:9031 "Gallus gallus" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0017127 "cholesterol transporter activity"
evidence=IEA] [GO:0034364 "high-density lipoprotein particle"
evidence=IEA] [GO:0043691 "reverse cholesterol transport"
evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] InterPro:IPR001124 InterPro:IPR017130
InterPro:IPR017942 InterPro:IPR017943 Pfam:PF01273 Pfam:PF02886
PIRSF:PIRSF037185 SMART:SM00328 SMART:SM00329 GO:GO:0008203
GO:GO:0017127 GO:GO:0043691 GO:GO:0008289 GO:GO:0034364
SUPFAM:SSF55394 EMBL:AB205527 IPI:IPI00600735 RefSeq:NP_001029986.1
UniGene:Gga.32589 ProteinModelPortal:Q3V6R6 SMR:Q3V6R6
STRING:Q3V6R6 GeneID:415645 KEGG:gga:415645 CTD:1071
eggNOG:NOG252260 HOGENOM:HOG000111553 HOVERGEN:HBG005310
InParanoid:Q3V6R6 OrthoDB:EOG4GMTX5 NextBio:20819214
PANTHER:PTHR10504:SF12 Uniprot:Q3V6R6
Length = 505
Score = 116 (45.9 bits), Expect = 0.00058, P = 0.00058
Identities = 54/269 (20%), Positives = 109/269 (40%)
Query: 52 LINKATSSIIPL-----ELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYVETGDPDL 106
L+N+ T+ +I + P+I + + +G V L+NI + + I+ S VE + D
Sbjct: 48 LLNQETARLIQASFKHAKFPNITGERSMRFLGTVAYTLANIQVSDLSIEQSEVELKENDA 107
Query: 107 L-LAVSGATADCGMNWEYSY-GSWLLPTISDSGAAXXXXXXXXXXXXXXXKEQGGIVKVI 164
+ +A+ TA Y Y G+W L +E+ V
Sbjct: 108 IDIAIKNVTAFFRGTLTYGYAGAWFLQLFHSVDFEIQSSIDLQINIKLLCQEEQ--VAAD 165
Query: 165 LVDC--GSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKISELITKLDSIFQ 222
DC H + ++ D WL Q + +K ++ + K+I+ L + +
Sbjct: 166 ASDCYLSFHKLMLHLQGDKEPGWLKQLFTDFISFTLKFVLKRELCKEINLLAQVMANFVH 225
Query: 223 SLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYYHKGFESSASCS 282
++ + + ++ S P++ + +E GL + + +L+ F S S
Sbjct: 226 NVAENFVQDEAIGLDISLASDPLIKANYLESHHEGLVLYKNYSDVLS--DSVF--SPSLL 281
Query: 283 SPAKMIGIQLNENVFSSGALVYFNSGTVV 311
S ++M+ ++E++ +S A F G +V
Sbjct: 282 SESRMLYFWISEHILNSLASAAFLDGRLV 310
>UNIPROTKB|J9P6T3 [details] [associations]
symbol:PLTP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008289 "lipid binding" evidence=IEA]
InterPro:IPR001124 InterPro:IPR017942 InterPro:IPR017943
InterPro:IPR017954 Pfam:PF01273 Pfam:PF02886 PROSITE:PS00400
SMART:SM00328 SMART:SM00329 GO:GO:0008289 SUPFAM:SSF55394
GeneTree:ENSGT00620000087589 CTD:5360 KO:K08761 EMBL:AAEX03013975
RefSeq:XP_543027.2 Ensembl:ENSCAFT00000045930 GeneID:485903
KEGG:cfa:485903 Uniprot:J9P6T3
Length = 495
Score = 114 (45.2 bits), Expect = 0.00094, P = 0.00094
Identities = 56/301 (18%), Positives = 123/301 (40%)
Query: 15 MFLSLLL-IPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKK 73
+F +LLL + AH ++ G I ++ K LD K + + + +PD+ +
Sbjct: 3 LFGALLLALLAGAHAEL-PGCKIR--VTSKALDLVKQEGLRFLEQELETITIPDLRGRE- 58
Query: 74 IPLIGKVHMALSNIIIYSVEIDSS--YVETGDPDLLLAVSGATADCGMNWEYSYGSWLLP 131
G + +S + + +++ SS + + G +L+L +S A+ G+ + W
Sbjct: 59 ----GHFYYNISEVKVTELQLTSSELHFQPGQ-ELVLQISNASL--GLRFRRQLLYWFF- 110
Query: 132 TISDSGAAXXXXXXXXXXXXXXXK-EQGGIVKVILVDCGSHVRDISIKVDGGASWLYQAL 190
D G + G +KV V C + V + G +Y+ L
Sbjct: 111 --YDGGYINASAEGVSIRTALELSGDPTGRIKVSNVSCQASVSRMHAAFGGTFKKVYEFL 168
Query: 191 FEAFEGKIKSAVESAVTKKISEL-ITKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDS 249
++ + + + + L+S+ ++P + V D+ ++ S ++ PV S S
Sbjct: 169 STFITSGMRFLLNQQICPVLYHAGMVLLNSLLDTVPVRSSVDDLVGIDYSLLKDPVASTS 228
Query: 250 SVEVEINGLFTAISGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGT 309
+++++ G F ++ + + ++ E +M+ + +E F S YF +G
Sbjct: 229 NLDMDFRGAFFPLAERNW-SLPNRAVEPQLQ--EEERMVYVAFSEFFFDSAMESYFRAGA 285
Query: 310 V 310
+
Sbjct: 286 L 286
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 320 305 0.00098 115 3 11 22 0.40 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 31
No. of states in DFA: 609 (65 KB)
Total size of DFA: 197 KB (2111 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.03u 0.07s 24.10t Elapsed: 00:00:02
Total cpu time: 24.04u 0.08s 24.12t Elapsed: 00:00:02
Start: Fri May 10 12:44:46 2013 End: Fri May 10 12:44:48 2013