BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020860
(320 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9MAU5|Y1049_ARATH Putative BPI/LBP family protein At1g04970 OS=Arabidopsis thaliana
GN=At1g04970 PE=2 SV=1
Length = 488
Score = 265 bits (676), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 128/280 (45%), Positives = 192/280 (68%), Gaps = 1/280 (0%)
Query: 35 YISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEI 94
+ S ++S+ GLDF KN L+NKA +SIIPL++P IEKS KIP +G + + +SN+ IY +++
Sbjct: 28 FTSVLVSQNGLDFVKNLLVNKAIASIIPLQIPRIEKSMKIPFLGGIDVVVSNLTIYELDV 87
Query: 95 DSSYVETGDPDLLLAVSGATADCGMNWEYSYGSWLLP-TISDSGAATVLVEGLEVGLTVS 153
SSYV+ G+ +++ SG T + MNW YSY +WL P ISD G A+V V+G+E+GL++
Sbjct: 88 ASSYVKLGETGVVIVASGTTCNLSMNWHYSYSTWLPPIEISDQGIASVQVQGMEIGLSLG 147
Query: 154 LKEQGGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKISEL 213
LK G +K+ L +CG HV DI+I+++GGASW YQ + AF+ +I S+VES + KK++E
Sbjct: 148 LKSDEGGLKLSLSECGCHVEDITIELEGGASWFYQGMVNAFKDQIGSSVESTIAKKLTEG 207
Query: 214 ITKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYYHK 273
++ LDS QSLPK+IPV D A +N +F P+L +SS+ EI+GLFT +L + K
Sbjct: 208 VSDLDSFLQSLPKEIPVDDNADLNVTFTSDPILRNSSITFEIDGLFTKGETNQVLKSFFK 267
Query: 274 GFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGTVVFL 313
S C +KM+GI ++E VF+S A +Y+N+ V ++
Sbjct: 268 KSVSLVICPGNSKMLGISVDEAVFNSAAALYYNADFVQWV 307
>sp|Q8VYC2|Y2070_ARATH Putative BPI/LBP family protein At3g20270 OS=Arabidopsis thaliana
GN=At3g20270 PE=2 SV=1
Length = 515
Score = 236 bits (603), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/321 (42%), Positives = 192/321 (59%), Gaps = 31/321 (9%)
Query: 6 KFSSPAILFMFLSLLLIP-----------TSAHVQVNEGGYISAVISKKGLDFFKNYLIN 54
KFS P+ LF FL + L+ +S Q N GG+IS ++S+ GL+F K+YLI
Sbjct: 26 KFSYPSTLFFFLEMALMKVMTILVLFVSVSSTLAQSNNGGHISIIVSETGLEFAKDYLIK 85
Query: 55 KATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYVETGDPDLLLAVSGAT 114
K ++ +PL+LPDIE KIPLIGKV M LSNI I +V + SS +ET ++L+V GAT
Sbjct: 86 KVITTTLPLQLPDIENKVKIPLIGKVRMGLSNIQIDAVHVQSSKMETRKDGIILSVLGAT 145
Query: 115 ADCGMNWEYSYGSWLLPTISDSGAATVLVEGLEVGLTVSLKEQGGIVKVILVDCGSHVRD 174
A+ M+W Y+Y + ISD G A+V V+G+ V +T +L G +K+ + V++
Sbjct: 146 ANLSMDWSYTYRASFFE-ISDHGDASVEVKGMNVRITATLVNDNGSLKIASRENDCTVKN 204
Query: 175 ISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKISELITKLDSIFQSLPKQIPVSDIA 234
I I ++GGASWLYQ + +AF+ I S VE V+ KI E + KLDS QSLPKQ + D A
Sbjct: 205 IDIHINGGASWLYQGVVDAFQKMIISTVEKTVSTKIVEKMKKLDSFLQSLPKQRKIDDSA 264
Query: 235 SMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYYHKGFESSASCSSPA--------K 286
++N +F +PVL +SSVEV+INGLF KG + + S + +
Sbjct: 265 AVNLTFTGNPVLGNSSVEVDINGLFMP-----------KGDDIKVAGSRSSSFFGGVNKR 313
Query: 287 MIGIQLNENVFSSGALVYFNS 307
M+ I + E VF+S LVYFN+
Sbjct: 314 MVTISVEEGVFNSATLVYFNA 334
>sp|P17213|BPI_HUMAN Bactericidal permeability-increasing protein OS=Homo sapiens GN=BPI
PE=1 SV=4
Length = 487
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 134/296 (45%), Gaps = 13/296 (4%)
Query: 19 LLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIG 78
L+ I T+ VN G + IS+KGLD+ + +++PD S KI +G
Sbjct: 21 LVAIGTAVTAAVNPG--VVVRISQKGLDYASQQGTAALQKELKRIKIPDYSDSFKIKHLG 78
Query: 79 KVHMALSNIIIYSVEIDSSYVETGDPDLLLAVSGATADCGMNWEYSYGSWLLPTISDSGA 138
K H + ++ I ++ SS + P++ L S + A+ ++ ++ L SG
Sbjct: 79 KGHYSFYSMDIREFQLPSSQISM-VPNVGLKFSISNANIKISGKWKAQKRFL---KMSGN 134
Query: 139 ATVLVEGLEVGLTVSL--KEQGGIVKVILVDCGSHVRDISIKV-DGGASWLYQALFEAFE 195
+ +EG+ + + L G + C SH+ + + + WL Q + E
Sbjct: 135 FDLSIEGMSISADLKLGSNPTSGKPTITCSSCSSHINSVHVHISKSKVGWLIQLFHKKIE 194
Query: 196 GKIKSAVESAVTKKISELI-TKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVE 254
+++ + S V +K++ + ++L FQ+LP + +A +N V P + +++V+
Sbjct: 195 SALRNKMNSQVCEKVTNSVSSELQPYFQTLPVMTKIDSVAGINYGLVAPPATTAETLDVQ 254
Query: 255 INGLFTAISGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGTV 310
+ G F + + + + E A+ +M+ + L++ F++ LVY +G +
Sbjct: 255 MKGEFYSENHHNPPPFAPPVMEFPAAHD---RMVYLGLSDYFFNTAGLVYQEAGVL 307
>sp|Q6AXU0|BPI_RAT Bactericidal permeability-increasing protein OS=Rattus norvegicus
GN=Bpi PE=2 SV=1
Length = 482
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 116/251 (46%), Gaps = 18/251 (7%)
Query: 17 LSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPL 76
L+LL I +A + G++ A IS+KGLDF + + ++ + +PD KI
Sbjct: 14 LALLAIVGTALTAATDPGFV-ARISQKGLDFVCQESMVELQKELLAISIPDFSGDFKIKH 72
Query: 77 IGKVHMALSNIIIYSVEIDSSYVETGDPD-LLLAVSGATADCGMNWEYSYGSWLLPTISD 135
+GK ++ + I ++ D L L+++ A+ W+Y +
Sbjct: 73 LGKGTYEFYSMAVEGFHIPDPQIKLLPSDGLQLSITSASIKISGRWKYRKN-----ILKA 127
Query: 136 SGAATVLVEGLEVGLTVSL-KEQGGIVKVILVDCGSHVRDISIKVDGGA-SWLYQALFEA 193
SG + ++G+ + + L + G + + C SH+ + IKV G WL Q
Sbjct: 128 SGNFQLSIQGVSIIADLILGNDPSGRITITCSTCDSHINSVRIKVSGSMLGWLIQ----L 183
Query: 194 FEGKIKSAVESAVTKKISELI-----TKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSD 248
F KI+++++ + KKI +++ KL ++LP V DI S++ S + P+ +D
Sbjct: 184 FHRKIETSLKKTIYKKICKIVRNSVSAKLQPYVKTLPVVAKVDDITSIDYSLLAPPMTTD 243
Query: 249 SSVEVEINGLF 259
+E ++ G F
Sbjct: 244 KFLEGQLRGEF 254
>sp|P18428|LBP_HUMAN Lipopolysaccharide-binding protein OS=Homo sapiens GN=LBP PE=1 SV=3
Length = 481
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 116/287 (40%), Gaps = 29/287 (10%)
Query: 38 AVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSS 97
A I+ KGL + + S ++ + LPD +IP +G+ ++ I+S E+ S
Sbjct: 32 ARITDKGLQYAAQEGLLALQSELLRITLPDFTGDLRIPHVGRGRYEFHSLNIHSCELLHS 91
Query: 98 YVETGDPDLLLAVSGATADCGMNWEYSYGSWLLPT--ISDSGAATVLVEGLEVGLTVSL- 154
+ + G + + G W + G+ V V+G+ + + + L
Sbjct: 92 ALRP------VPGQGLSLSISDSSIRVQGRWKVRKSFFKLQGSFDVSVKGISISVNLLLG 145
Query: 155 KEQGGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKISELI 214
E G V C S + D+ + + G WL E K + +ES + + I + +
Sbjct: 146 SESSGRPTVTASSCSSDIADVEVDMSGDLGWLLNLFHNQIESKFQKVLESRICEMIQKSV 205
Query: 215 -TKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYYHK 273
+ L Q+LP + A ++ S V +P + +EV G +H+
Sbjct: 206 SSDLQPYLQTLPVTTEIDSFADIDYSLVEAPRATAQMLEVMFKG-----------EIFHR 254
Query: 274 GFES-----SASCSSPA---KMIGIQLNENVFSSGALVYFNSGTVVF 312
S +A S P KM+ +++ VF++ +LVY G + F
Sbjct: 255 NHRSPVTLLAAVMSLPEEHNKMVYFAISDYVFNTASLVYHEEGYLNF 301
>sp|Q2TBI0|LBP_BOVIN Lipopolysaccharide-binding protein OS=Bos taurus GN=LBP PE=2 SV=1
Length = 481
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 118/276 (42%), Gaps = 11/276 (3%)
Query: 40 ISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYV 99
I+ +GL++ + S + + LPD +I G V ++ I S ++ S +
Sbjct: 34 ITDQGLEYVAQEELLALQSKLHKVTLPDFNGDVRIKHFGSVDYRFHSLNIQSCKLLGSAL 93
Query: 100 ET-GDPDLLLAVSGATADCGMNWEYSYGSWLLPTISDSGAATVLVEGLEVGLTVSLK-EQ 157
+ + L ++S + +W+ L G+ V V+G+ + + + L E
Sbjct: 94 KLLPNQGLHFSISDSFIQVTGDWKVRKRILRL-----DGSFDVKVKGITISVNLLLDSEP 148
Query: 158 GGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKISELIT-K 216
G KV + C SH+RD+ + + G WL E + + +ES + + I + +T +
Sbjct: 149 SGRPKVAVSSCSSHIRDVEVHISGDLGWLLNLFHNQIESRFRRVLESKICEIIEDSVTSE 208
Query: 217 LDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYYHKGFE 276
L Q+LP + +A ++ S + +P + ++V G + + +
Sbjct: 209 LQPYLQTLPVTTEIDHLAGLDYSLMGAPQATAQMLDVMFKGEIFSRDDRFPVAFLAPVMN 268
Query: 277 SSASCSSPAKMIGIQLNENVFSSGALVYFNSGTVVF 312
S +M+ +++ F++ +LVY +G + F
Sbjct: 269 LPEEHS---RMVYFAISDYAFNTASLVYHKAGFLNF 301
>sp|Q28739|BPI_RABIT Bactericidal permeability-increasing protein (Fragment)
OS=Oryctolagus cuniculus GN=BPI PE=2 SV=1
Length = 445
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 123/276 (44%), Gaps = 22/276 (7%)
Query: 42 KKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYVET 101
+KGLD+ + + + +PD+ K+ GK H ++++ S ++ + +
Sbjct: 1 QKGLDYACQQGVAVLQKELEKIRIPDVSGKFKLRPFGKGHYNFHSLVVRSFQLPNPQIRL 60
Query: 102 GDPD--LLLAVSGATADCGMNWEYSYGSWLLPTISDSGAATVLVEGLEVGLTVSLKE--Q 157
P+ L +++S A G W+ G I G + VEG+ + + L
Sbjct: 61 -QPNVGLRVSISNANVRIGGRWKARKG-----FIKVRGKFDLSVEGVSISADLKLGSVPA 114
Query: 158 GGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKISELIT-- 215
G V C S++ ++ ASW + F +I+S++ + + KI +++T
Sbjct: 115 SGRATVTCSSCSSNINRARLRSQ--ASW--GGWLKLFHKRIESSLRNTMNSKICQVLTSS 170
Query: 216 ---KLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYYH 272
KL ++LP + + +A ++ S V P + S+++++ G F ++ S +
Sbjct: 171 VSSKLQPYVETLPLKERLDSVAGIDYSLVAPPRATADSLDMQLKGEFYNVARPSPPPFM- 229
Query: 273 KGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSG 308
A S +MI + +++ +F++ ALVY +G
Sbjct: 230 --PPPMAIPSLHDRMIYLAISDYLFNTAALVYQQAG 263
>sp|P55065|PLTP_MOUSE Phospholipid transfer protein OS=Mus musculus GN=Pltp PE=1 SV=1
Length = 493
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 123/279 (44%), Gaps = 26/279 (9%)
Query: 40 ISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYV 99
++ LD K + + + +PD+ +K G + +S++ + + + SS +
Sbjct: 26 VTSAALDLVKQEGLRFLEQELETITIPDVYGAK-----GHFYYNISDVRVTQLHLISSEL 80
Query: 100 E-TGDPDLLLAVSGATADCGMNWEYSYGSWLLPTISDSGAATVLVEGLEV--GLTVSLKE 156
D DLLL +S A+ G+++ W L D G EG+ + GL +S ++
Sbjct: 81 HFQPDQDLLLNISNAS--LGLHFRRQLLYWFL---YDGGYINASAEGVSIRTGLQLS-QD 134
Query: 157 QGGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKISELITK 216
G +KV V C + V +++ G ++ ++ F I S + + ++I ++
Sbjct: 135 SSGRIKVSNVSCEASVSKMNMAFGGT----FRRMYNFFSTFITSGMRFLLNQQICPVLYH 190
Query: 217 -----LDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYY 271
L+S+ ++P + V D+ ++ S ++ PV+S+ ++++E G F + N+
Sbjct: 191 AGTVLLNSLLDTVPVRSSVDDLVGIDYSLLKDPVVSNGNLDMEFRGAFFPLKED---NWS 247
Query: 272 HKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGTV 310
+M+ + +E F S YF +G +
Sbjct: 248 LPNRAVEPQLEDDERMVYVAFSEFFFDSAMESYFQAGAL 286
>sp|P17453|BPI_BOVIN Bactericidal permeability-increasing protein OS=Bos taurus GN=BPI
PE=2 SV=2
Length = 482
Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 132/296 (44%), Gaps = 23/296 (7%)
Query: 24 TSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMA 83
++A N G I A I++KGLD+ + + + +P+ + KI +GK +
Sbjct: 21 STAVTTTNPG--IVARITQKGLDYACQQGVLTLQKELEKITIPNFSGNFKIKYLGKGQYS 78
Query: 84 LSNIIIYSVEIDSSYVET-GDPDLLLAVSGATADCGMNWEYSYGSWLLPTISDSGAATVL 142
+++I + +S + D L L++ A+ W+ I G +
Sbjct: 79 FFSMVIQGFNLPNSQIRPLPDKGLDLSIRDASIKIRGKWKARKN-----FIKLGGNFDLS 133
Query: 143 VEGLEV--GLTVSLKEQGGIVKVILVDCGSHVRDISIKVDGGA-SWLYQALFEAFEGKIK 199
VEG+ + GL + G V C S + + I + G + WL Q F +I+
Sbjct: 134 VEGISILAGLNLGYDPASGHSTVTCSSCSSGINTVRIHISGSSLGWLIQ----LFRKRIE 189
Query: 200 SAVESAVTKKISELIT-----KLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVE 254
S ++ ++T+KI E++T KL FQ+LP + +A ++ S V P + ++++
Sbjct: 190 SLLQKSMTRKICEVVTSTVSSKLQPYFQTLPVTTKLDKVAGVDYSLVAPPRATANNLDWL 249
Query: 255 INGLFTAISGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGTV 310
+ G F +++ S + + A S +M+ + ++E F++ VY +G +
Sbjct: 250 LKGEFFSLAHRSPPPFAP---PALAFPSDHDRMVYLGISEYFFNTAGFVYQKAGAL 302
>sp|P17454|LBP_RABIT Lipopolysaccharide-binding protein OS=Oryctolagus cuniculus GN=LBP
PE=1 SV=2
Length = 482
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/273 (19%), Positives = 115/273 (42%), Gaps = 13/273 (4%)
Query: 40 ISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYV 99
I+ KGL++ + ++ + LPD + +I G+ ++ I E+ +
Sbjct: 35 ITDKGLEYAAREGLLALQRKLLEVTLPDSDGDFRIKHFGRAQYKFYSLKIPRFELLRGTL 94
Query: 100 ETGDPDLLLAVSGATADCGMNWEYSYGSWLLPT--ISDSGAATVLVEGLEVGLTVSL-KE 156
L G + D + + GSW + + + + V+GL + + + L E
Sbjct: 95 RP------LPGQGLSLDISDAYIHVRGSWKVRKAFLRLKNSFDLYVKGLTISVHLVLGSE 148
Query: 157 QGGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKISELIT- 215
G V C S ++++ + ++G L L + +++ +ES + ++I E +T
Sbjct: 149 SSGRPTVTTSSCSSDIQNVELDIEGDLEELLNLLQSQIDARLREVLESKICRQIEEAVTA 208
Query: 216 KLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYYHKGF 275
L Q+LP + A ++ S + +P + ++V G + S +++
Sbjct: 209 HLQPYLQTLPVTTQIDSFAGIDYSLMEAPRATAGMLDVMFKGEIFPLDHRSPVDFLAPAM 268
Query: 276 ESSASCSSPAKMIGIQLNENVFSSGALVYFNSG 308
+ S +M+ +++ VF++ +L Y SG
Sbjct: 269 NLPEAHS---RMVYFSISDYVFNTASLAYHKSG 298
>sp|Q67E05|BPI_MOUSE Bactericidal permeability-increasing protein OS=Mus musculus GN=Bpi
PE=2 SV=1
Length = 483
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 136/315 (43%), Gaps = 47/315 (14%)
Query: 17 LSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPL 76
L LL I +A + G++ A+IS+KGLDF + + + + +PD KI
Sbjct: 14 LLLLAIIGTALTAATDPGFV-AMISQKGLDFACQQGVVELQKELQAISVPDFSGVFKIKH 72
Query: 77 IGKVHMALSNIIIYSVEIDSSYVETGDPDLL----LAVSGATADCGMNWEYSYGSWLLPT 132
+GK + YS+ +D ++ ++L L V A +N G W+
Sbjct: 73 LGK-----GSYEFYSMAVDGFHIPNPKIEMLPSDGLRVFIKDASIKIN-----GKWMSRK 122
Query: 133 --ISDSGAATVLVEGLEVGLTVSL-KEQGGIVKVILVDCGSHVRDISIKVDGGA-SWLYQ 188
+ G + ++G+ + + L + G + I +C SH+ + IK+ G WL +
Sbjct: 123 NFLKAGGNFELSIQGVSISTDLILGSDSSGHITTICSNCDSHIDSVHIKISGSMLGWLIR 182
Query: 189 ALFEAFEGKIKSAVESAVTKKISELI-----TKLDSIFQSLPKQIPVSDIASMNTSFVRS 243
F KI++++++ + KKI +++ +KL ++L V D+ S++ S +
Sbjct: 183 ----LFHRKIETSLKNIIYKKICKIVRDSVSSKLQPYLKTLSVITRVDDVTSVDYSLLAP 238
Query: 244 PVLSDSSVEVEINGLFTAISGTSMLNYYHKGFESSASCSSP--------AKMIGIQLNEN 295
++ +E ++ G ++ +G P A M+ + +++
Sbjct: 239 LTTTNQFLEGQLKG-----------EFFWRGHRDPLPIHPPVMRFVPNGAYMVCMGISDY 287
Query: 296 VFSSGALVYFNSGTV 310
F++ L Y SGT+
Sbjct: 288 FFNTEVLAYQQSGTL 302
>sp|Q61805|LBP_MOUSE Lipopolysaccharide-binding protein OS=Mus musculus GN=Lbp PE=2 SV=2
Length = 481
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 119/294 (40%), Gaps = 29/294 (9%)
Query: 30 VNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIII 89
VN G + A I+ KGL + + + + LPD KI +G+ ++ I
Sbjct: 26 VNPG--VVARITDKGLAYAAKEGLVALQRELYKITLPDFSGDFKIKAVGRGQYEFHSLEI 83
Query: 90 YSVEIDSSYVET-GDPDLLLAVSGATADCGMNWEYSYGSWLLPTISDSGAATVLVEGLEV 148
+ E+ S ++ L LA+S ++ W+ L G+ + V+G+ +
Sbjct: 84 QNCELRGSSLKLLPGQGLSLAISDSSIGVRGKWKVRKSFLKL-----HGSFDLDVKGVTI 138
Query: 149 GLTVSL-KEQGGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVT 207
+ + L + G V C S + D+ + + G WL E K++ +E+ V
Sbjct: 139 SVDLLLGMDPSGRPTVSASGCSSRICDLDVHISGNVGWLLNLFHNQIESKLQKVLENKVC 198
Query: 208 KKISELIT-KLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTS 266
+ I + +T L Q+LP + ++ ++ S V +P ++V G
Sbjct: 199 EMIQKSVTSDLQPYLQTLPVTAEIDNVLGIDYSLVAAPQAKAQVLDVMFKG--------E 250
Query: 267 MLNYYHKGFESSASCSSPA--------KMIGIQLNENVFSSGALVYFNSGTVVF 312
+ N H+ S + +P +M+ +++ F+ + VY +G + F
Sbjct: 251 IFNRNHR---SPVATPTPTMSLPEDSKQMVYFAISDYAFNIASRVYHQAGYLNF 301
>sp|Q63313|LBP_RAT Lipopolysaccharide-binding protein OS=Rattus norvegicus GN=Lbp PE=2
SV=1
Length = 481
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 64/154 (41%), Gaps = 20/154 (12%)
Query: 168 CGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKISELIT-KLDSIFQSLPK 226
C + +RD+ + V G WL E K++ +ES + + I + +T L Q+LP
Sbjct: 159 CSNRIRDLELHVSGNVGWLLNLFHNQIESKLQKVLESKICEMIQKSVTSDLQPYLQTLPV 218
Query: 227 QIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYYHKGFESSASCSSPA- 285
+ I ++ S V +P +++V G + N H+ S + +P
Sbjct: 219 TADIDTILGIDYSLVAAPQAKAQTLDVMFKG--------EIFNRNHR---SPVTTPTPTM 267
Query: 286 -------KMIGIQLNENVFSSGALVYFNSGTVVF 312
+M+ +++ F+ VY +G + F
Sbjct: 268 SLPEDSKQMVYFAISDQAFNIATRVYHQAGYLNF 301
>sp|Q8NFQ6|BPIFC_HUMAN BPI fold-containing family C protein OS=Homo sapiens GN=BPIFC PE=1
SV=1
Length = 507
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/277 (18%), Positives = 114/277 (41%), Gaps = 12/277 (4%)
Query: 36 ISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPL--IGKVHMALSNIIIYSVE 93
I A I+++ LD+ + + +LPD+ S+ + + V+ SNI I +
Sbjct: 30 IKARITQRALDYGVQAGMKMIEQMLKEKKLPDLSGSESLEFLKVDYVNYNFSNIKISAFS 89
Query: 94 I-DSSYVETGDPDLLLAVSGATADCGMNWEYSYGSWLLPTISDSGAATVLVEGLE-VGLT 151
++S + + TA+ +W + P D+G A + + G+ G+
Sbjct: 90 FPNTSLAFVPGVGIKALTNHGTANISTDWGFES-----PLFQDTGGADLFLSGVYFTGII 144
Query: 152 VSLKEQGGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKIS 211
+ + G + L DC + + + G S LY + E E I + + I+
Sbjct: 145 ILTRNDFGHPTLKLQDCYAQLSHAHVSFSGELSVLYNSFAEPMEKPILKNLNEMLCPIIA 204
Query: 212 ELITKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYY 271
+ L++ +L + + ++ S + SP ++++ +++ + G+F + + +
Sbjct: 205 SEVKALNANLSTLEVLTKIDNYTLLDYSLISSPEITENYLDLNLKGVFYPLENLTDPPFS 264
Query: 272 HKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSG 308
F +S M+ I + E F S + +F +G
Sbjct: 265 PVPFVLPERSNS---MLYIGIAEYFFKSASFAHFTAG 298
>sp|P55058|PLTP_HUMAN Phospholipid transfer protein OS=Homo sapiens GN=PLTP PE=1 SV=1
Length = 493
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/282 (18%), Positives = 120/282 (42%), Gaps = 26/282 (9%)
Query: 40 ISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYV 99
++ K L+ K + + + +PD+ + G + +S + + +++ SS +
Sbjct: 26 VTSKALELVKQEGLRFLEQELETITIPDLRGKE-----GHFYYNISEVKVTELQLTSSEL 80
Query: 100 E-TGDPDLLLAVSGATADCGMNWEYSYGSWLLPTISDSGAATVLVEGLEV--GLTVSLKE 156
+ +L+L ++ A+ G+ + W D G EG+ + GL +S ++
Sbjct: 81 DFQPQQELMLQITNAS--LGLRFRRQLLYWFF---YDGGYINASAEGVSIRTGLELS-RD 134
Query: 157 QGGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKISELITK 216
G +KV V C + V + G ++ +++ I S + + ++I ++
Sbjct: 135 PAGRMKVSNVSCQASVSRMHAAFGGT----FKKVYDFLSTFITSGMRFLLNQQICPVLYH 190
Query: 217 -----LDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYY 271
L+S+ ++P + V ++ ++ S ++ PV S S+++++ G F ++ N+
Sbjct: 191 AGTVLLNSLLDTVPVRSSVDELVGIDYSLMKDPVASTSNLDMDFRGAFFPLTER---NWS 247
Query: 272 HKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGTVVFL 313
+M+ + +E F S YF +G + L
Sbjct: 248 LPNRAVEPQLQEEERMVYVAFSEFFFDSAMESYFRAGALQLL 289
>sp|Q3V6R6|CETP_CHICK Cholesteryl ester transfer protein OS=Gallus gallus GN=CETP PE=2
SV=1
Length = 505
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 114/269 (42%), Gaps = 15/269 (5%)
Query: 52 LINKATSSIIPL-----ELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYVETGDPDL 106
L+N+ T+ +I + P+I + + +G V L+NI + + I+ S VE + D
Sbjct: 48 LLNQETARLIQASFKHAKFPNITGERSMRFLGTVAYTLANIQVSDLSIEQSEVELKENDA 107
Query: 107 L-LAVSGATADCGMNWEYSY-GSWLLPTISDSGAATVLVEGLEVGLTVSLKEQGGIVKVI 164
+ +A+ TA Y Y G+W L + +++ + + L Q V
Sbjct: 108 IDIAIKNVTAFFRGTLTYGYAGAWFLQLFHSVDFE--IQSSIDLQINIKLLCQEEQVAAD 165
Query: 165 LVDC--GSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKISELITKLDSIFQ 222
DC H + ++ D WL Q + +K ++ + K+I+ L + +
Sbjct: 166 ASDCYLSFHKLMLHLQGDKEPGWLKQLFTDFISFTLKFVLKRELCKEINLLAQVMANFVH 225
Query: 223 SLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYYHKGFESSASCS 282
++ + + ++ S P++ + +E GL + + +L+ F S S
Sbjct: 226 NVAENFVQDEAIGLDISLASDPLIKANYLESHHEGLVLYKNYSDVLS--DSVF--SPSLL 281
Query: 283 SPAKMIGIQLNENVFSSGALVYFNSGTVV 311
S ++M+ ++E++ +S A F G +V
Sbjct: 282 SESRMLYFWISEHILNSLASAAFLDGRLV 310
>sp|Q8C186|BPIFC_MOUSE BPI fold-containing family C protein OS=Mus musculus GN=Bpifc PE=2
SV=1
Length = 509
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 115/285 (40%), Gaps = 22/285 (7%)
Query: 36 ISAVISKKGLDF---FKNYLINKATSSIIPLELPDIEKSKKIPL--IGKVHMALSNIIIY 90
I+A I+++ LD+ ++ + I+ +PD+ S+ + I V SNI I
Sbjct: 30 ITARITQRALDYGLQVGMKVLEQLAKEIV---IPDLNGSESLKFLKIDYVKYNFSNIKIN 86
Query: 91 SVEIDSSYVETGDPDLLLAVSG-ATADCGMNWEYSYGSWLLPTISDSGAATVLVEGLE-V 148
+ ++ + + A+S TA+ NW S P DSGAA + + G+
Sbjct: 87 AFSFPNTSLAFVPGVGIRALSNHGTANISTNW-----SVKAPLFRDSGAANLFLSGIYFT 141
Query: 149 GLTVSLKEQGGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTK 208
G+ + G + L DC V + G S LY + E E I + V
Sbjct: 142 GIVAFTRNDFGYPALELQDCHVQVSHARVSFFGSLSALYNSFAEPMEKPILKNLNEMVQL 201
Query: 209 ---KISELITKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGT 265
IS+ + + + +L + + ++ S + P ++++ ++ + G F +
Sbjct: 202 CPIAISQ-VEQFNVNISALEVLTKIDNYTVLDCSLISPPEITENHLDFNLKGAFYPLESL 260
Query: 266 SMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGTV 310
+ F S S M+ I ++E F S + ++ SG +
Sbjct: 261 VDPPFTPAPFHLPESRDS---MLYIGISEYFFKSASFAHYVSGAL 302
>sp|P22687|CETP_RABIT Cholesteryl ester transfer protein (Fragment) OS=Oryctolagus
cuniculus GN=CETP PE=2 SV=1
Length = 497
Score = 36.2 bits (82), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 106/272 (38%), Gaps = 19/272 (6%)
Query: 52 LINKATSSIIPLEL-----PDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYVETGDPDL 106
++N+ T+ ++ PD+ + + L+G+V L N+ I + I SS VE D
Sbjct: 23 VLNQETAKVVQTAFQRAGYPDVSGERAVMLLGRVKYGLHNLQISHLSIASSQVELVDAKT 82
Query: 107 L-LAVSGATADCGMNWEYSYGS-WLLPTISDSGAATVLVEGLEVGLTVSLKEQGGIVKVI 164
+ +A+ + YSY S W L + + +++ + L G V+
Sbjct: 83 IDVAIQNVSVVFKGTLNYSYTSAWGLGI--NQSVDFEIDSAIDLQINTELTCDAGSVRTN 140
Query: 165 LVDC--GSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKISELITKLDSIFQ 222
DC H + ++ + WL Q +K ++ V +I+ + + Q
Sbjct: 141 APDCYLAFHKLLLHLQGEREPGWLKQLFTNFISFTLKLILKRQVCNEINTISNIMADFVQ 200
Query: 223 SLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTA--ISGTSMLNYYHKGFESSAS 280
+ I ++ S +PV++ + +E G FT +S L + G
Sbjct: 201 TRAASILSDGDIGVDISVTGAPVITATYLESHHKGHFTHKNVSEAFPLRAFPPGLLGD-- 258
Query: 281 CSSPAKMIGIQLNENVFSSGALVYFNSGTVVF 312
++M+ ++ V +S A F G +V
Sbjct: 259 ----SRMLYFWFSDQVLNSLARAAFQEGRLVL 286
>sp|P47896|CETP_MACFA Cholesteryl ester transfer protein OS=Macaca fascicularis GN=CETP
PE=2 SV=1
Length = 493
Score = 35.8 bits (81), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 110/283 (38%), Gaps = 41/283 (14%)
Query: 52 LINKATSSIIP-----LELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYVETGDPDL 106
++N+ T+ +I P+I K + L+G+V L NI I + I SS VE +
Sbjct: 39 VLNQETAKVIQSAFQRANYPNITGEKAMMLLGQVKYGLHNIQISHLSIASSRVELVEAKS 98
Query: 107 L-LAVSGATADCGMNWEYSYGS-WLLPTISDSGAATVLVEGLEVGLTVSLKEQGGIVKVI 164
+ +++ + +Y Y + W L D + +++ + L G V+
Sbjct: 99 IDVSIQNVSVVFKGTLKYGYTTAWGLGI--DQSVDFEIDSAIDLQINTQLTCDSGRVRTD 156
Query: 165 LVDCGSHVRDISIKVDGGAS--WLYQALFEAFEGKIKSAVESAVTKKISELITKLDSIFQ 222
DC + + + G W+ Q +K ++ + K+I+
Sbjct: 157 APDCYLSFHKLLLHLQGEREPGWIKQLFTNFISFTLKLVLKGQICKEIN----------- 205
Query: 223 SLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYYHKGFESSASCS 282
+S+I + + +LSD + V+I+ I S L +HKG+ + S
Sbjct: 206 ------IISNIMADFVQTRAASILSDGDIGVDISLTGDPIITASYLESHHKGYFIYKNVS 259
Query: 283 --------SPA-----KMIGIQLNENVFSSGALVYFNSGTVVF 312
SPA +M+ +E VF S A V F G ++
Sbjct: 260 EDLPLPTFSPALLGDSRMLYFWFSEQVFHSLAKVAFQDGRLML 302
>sp|Q10011|YSV5_CAEEL Uncharacterized protein T19C3.5 OS=Caenorhabditis elegans
GN=T19C3.5 PE=1 SV=2
Length = 489
Score = 35.8 bits (81), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 132 TISDSGAATVLVEGLEVGLTVSLKEQGGIVKVILVDCGSHVRDISIKVDGGA-SW---LY 187
TI D G G+++ ++ + + G +V + DC ++ + +++ G SW L+
Sbjct: 116 TIRDKGWLNAYATGIQMNISAAAYQLDGQPQVKIGDCTVQIQKLDVEIGGSVLSWLVNLF 175
Query: 188 QALFEAFEGKIKSAVESAVTKKISELITKLDSIFQSLPKQIPV 230
+ F K+ +A + K I LI + + SLP + V
Sbjct: 176 ETPFSKLVKKVINAQACSAAKGI--LIEEANRFLHSLPSHVDV 216
>sp|P11597|CETP_HUMAN Cholesteryl ester transfer protein OS=Homo sapiens GN=CETP PE=1
SV=2
Length = 493
Score = 35.4 bits (80), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 104/273 (38%), Gaps = 21/273 (7%)
Query: 52 LINKATSSIIPLEL-----PDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYVETGDP-- 104
++N T+ +I PDI K + L+G+V L NI I + I SS VE +
Sbjct: 39 VLNHETAKVIQTAFQRASYPDITGEKAMMLLGQVKYGLHNIQISHLSIASSQVELVEAKS 98
Query: 105 -DLLLAVSGATADCGMNWEYSYGSWLLPTISDSGAATVLVEGLEVGLTVSLKEQGGIVKV 163
D+ + + + Y+ WL D + +++ + L G V+
Sbjct: 99 IDVSIQNVSVVFKGTLKYGYTTAWWLG---IDQSIDFEIDSAIDLQINTQLTCDSGRVRT 155
Query: 164 ILVDCGSHVRDISIKVDGGAS--WLYQALFEAFEGKIKSAVESAVTKKISELITKLDSIF 221
DC + + + G W+ Q +K ++ + K+I+ + +
Sbjct: 156 DAPDCYLSFHKLLLHLQGEREPGWIKQLFTNFISFTLKLVLKGQICKEINVISNIMADFV 215
Query: 222 QSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEING--LFTAISGTSMLNYYHKGFESSA 279
Q+ I ++ S PV++ S +E G ++ +S L + S
Sbjct: 216 QTRAASILSDGDIGVDISLTGDPVITASYLESHHKGHFIYKNVSEDLPLPTF------SP 269
Query: 280 SCSSPAKMIGIQLNENVFSSGALVYFNSGTVVF 312
+ ++M+ +E VF S A V F G ++
Sbjct: 270 TLLGDSRMLYFWFSERVFHSLAKVAFQDGRLML 302
>sp|Q9X6N4|MURE_VIBCH UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
ligase OS=Vibrio cholerae serotype O1 (strain ATCC 39315
/ El Tor Inaba N16961) GN=murE PE=3 SV=3
Length = 495
Score = 31.6 bits (70), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 11/99 (11%)
Query: 84 LSNIIIYSVEIDSSYVETGDPDLLLAVSGATADCGMNWEYSYGSWLLPTISDSGAATVLV 143
L+ ++I +E+DS +++GD +A+ G D G + GA VL
Sbjct: 22 LAALVITHLELDSRLIKSGDT--FVAIQGHAVD---------GRQFIDKAIAQGANLVLA 70
Query: 144 EGLEVGLTVSLKEQGGIVKVILVDCGSHVRDISIKVDGG 182
E L ++ + G+ + L + G H+ +++ ++ GG
Sbjct: 71 EADAQHLNGWVEYRAGVPVIYLAELGQHLSELAGRLYGG 109
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112,461,096
Number of Sequences: 539616
Number of extensions: 4474283
Number of successful extensions: 13900
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 13859
Number of HSP's gapped (non-prelim): 47
length of query: 320
length of database: 191,569,459
effective HSP length: 117
effective length of query: 203
effective length of database: 128,434,387
effective search space: 26072180561
effective search space used: 26072180561
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)