Query 020863
Match_columns 320
No_of_seqs 168 out of 1214
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 05:45:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020863.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020863hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569 Permease of the major 100.0 6.6E-42 1.4E-46 303.7 31.0 291 8-302 180-472 (485)
2 KOG0254 Predicted transporter 100.0 3.8E-32 8.3E-37 250.9 32.7 293 10-305 207-504 (513)
3 TIGR00887 2A0109 phosphate:H+ 100.0 3.7E-30 8E-35 237.4 22.6 276 9-297 201-501 (502)
4 PF00083 Sugar_tr: Sugar (and 100.0 5.1E-36 1.1E-40 273.2 -16.6 283 9-299 168-451 (451)
5 KOG0253 Synaptic vesicle trans 100.0 5.3E-28 1.1E-32 202.4 18.1 267 10-292 228-527 (528)
6 PRK10077 xylE D-xylose transpo 100.0 1.4E-25 3.1E-30 206.0 31.2 279 9-302 191-475 (479)
7 TIGR01299 synapt_SV2 synaptic 99.9 6.3E-26 1.4E-30 213.9 23.5 268 9-292 331-741 (742)
8 KOG0252 Inorganic phosphate tr 99.9 2.5E-25 5.3E-30 191.7 10.7 274 9-300 222-513 (538)
9 TIGR00898 2A0119 cation transp 99.9 2.3E-23 5E-28 192.7 19.5 262 10-294 241-504 (505)
10 TIGR00879 SP MFS transporter, 99.9 2.8E-21 6.1E-26 176.9 29.0 284 8-294 192-480 (481)
11 KOG0255 Synaptic vesicle trans 99.9 8.8E-20 1.9E-24 169.4 25.2 272 10-300 232-508 (521)
12 PRK10642 proline/glycine betai 99.9 5.9E-20 1.3E-24 169.1 23.4 248 8-292 188-437 (490)
13 PRK10406 alpha-ketoglutarate t 99.8 1.8E-17 3.8E-22 150.4 21.9 233 8-291 194-429 (432)
14 PRK09952 shikimate transporter 99.8 3.2E-17 6.9E-22 148.9 21.6 237 8-288 195-436 (438)
15 PRK15075 citrate-proton sympor 99.7 6.6E-15 1.4E-19 133.7 21.6 174 111-296 253-431 (434)
16 TIGR00903 2A0129 major facilit 99.7 4.4E-15 9.6E-20 131.5 17.6 216 9-280 141-361 (368)
17 PRK12307 putative sialic acid 99.7 6.6E-15 1.4E-19 133.3 18.7 219 9-264 169-388 (426)
18 PRK11663 regulatory protein Uh 99.7 4.6E-15 1E-19 134.7 16.6 165 115-290 262-430 (434)
19 PRK11273 glpT sn-glycerol-3-ph 99.6 2.4E-14 5.1E-19 130.8 19.6 249 9-288 184-440 (452)
20 PRK10489 enterobactin exporter 99.6 5.3E-14 1.2E-18 127.1 19.5 239 10-298 174-413 (417)
21 PRK03893 putative sialic acid 99.6 1.5E-13 3.2E-18 127.0 21.7 161 116-287 295-457 (496)
22 TIGR00891 2A0112 putative sial 99.6 1.5E-13 3.3E-18 123.3 20.6 231 9-265 165-397 (405)
23 PRK11551 putative 3-hydroxyphe 99.6 8.5E-14 1.8E-18 125.3 18.8 153 116-281 240-393 (406)
24 PRK09556 uhpT sugar phosphate 99.6 6.4E-14 1.4E-18 128.4 17.8 179 87-281 254-446 (467)
25 COG2271 UhpC Sugar phosphate p 99.6 3.4E-14 7.4E-19 122.6 13.2 239 9-280 182-430 (448)
26 PRK11010 ampG muropeptide tran 99.6 3.1E-13 6.6E-18 124.4 19.4 235 9-287 171-405 (491)
27 TIGR00893 2A0114 d-galactonate 99.6 2.2E-13 4.7E-18 121.5 18.0 247 9-280 145-395 (399)
28 TIGR00712 glpT glycerol-3-phos 99.6 7.2E-14 1.6E-18 127.1 14.7 253 9-288 182-437 (438)
29 TIGR00883 2A0106 metabolite-pr 99.5 4E-13 8.7E-18 119.9 18.3 216 9-268 167-385 (394)
30 TIGR02332 HpaX 4-hydroxyphenyl 99.5 1.1E-13 2.4E-18 124.8 13.8 147 112-271 258-408 (412)
31 TIGR00890 2A0111 Oxalate/Forma 99.5 4.7E-13 1E-17 118.7 16.8 147 119-276 228-374 (377)
32 TIGR00899 2A0120 sugar efflux 99.5 4.8E-12 1E-16 112.5 19.2 152 119-285 222-374 (375)
33 PRK09705 cynX putative cyanate 99.5 6.1E-12 1.3E-16 112.8 18.4 164 114-291 223-388 (393)
34 PLN00028 nitrate transmembrane 99.5 1E-12 2.2E-17 120.7 13.6 150 118-280 274-429 (476)
35 TIGR00894 2A0114euk Na(+)-depe 99.4 1.6E-12 3.5E-17 119.2 14.3 239 10-280 196-446 (465)
36 PRK03545 putative arabinose tr 99.4 1.3E-11 2.7E-16 110.7 19.6 219 10-284 161-380 (390)
37 TIGR02332 HpaX 4-hydroxyphenyl 99.4 7.7E-12 1.7E-16 112.8 18.1 172 105-289 17-194 (412)
38 TIGR00889 2A0110 nucleoside tr 99.4 9.1E-12 2E-16 112.5 18.3 143 140-290 259-408 (418)
39 TIGR00895 2A0115 benzoate tran 99.4 4.4E-12 9.5E-17 113.4 16.2 164 113-289 34-197 (398)
40 TIGR00892 2A0113 monocarboxyla 99.4 1.5E-12 3.2E-17 119.0 12.7 217 86-318 236-455 (455)
41 TIGR00895 2A0115 benzoate tran 99.4 2.8E-12 6E-17 114.7 14.1 227 9-254 168-395 (398)
42 TIGR01299 synapt_SV2 synaptic 99.4 2.6E-11 5.6E-16 115.4 20.2 159 115-287 186-357 (742)
43 TIGR00893 2A0114 d-galactonate 99.4 6.4E-12 1.4E-16 112.0 14.0 162 115-289 13-174 (399)
44 PRK11902 ampG muropeptide tran 99.4 3.9E-11 8.6E-16 107.9 19.1 225 9-279 158-385 (402)
45 PRK15011 sugar efflux transpor 99.4 6.1E-11 1.3E-15 106.4 20.0 155 118-287 238-393 (393)
46 KOG2533 Permease of the major 99.4 2.3E-12 5.1E-17 116.8 10.7 138 8-166 202-347 (495)
47 PRK09528 lacY galactoside perm 99.4 1.5E-11 3.3E-16 111.2 15.1 134 141-286 271-405 (420)
48 PRK03545 putative arabinose tr 99.4 5.2E-11 1.1E-15 106.7 18.3 159 117-288 30-188 (390)
49 PRK15403 multidrug efflux syst 99.4 7.8E-11 1.7E-15 106.3 19.5 173 104-289 24-196 (413)
50 PRK11663 regulatory protein Uh 99.4 5.5E-11 1.2E-15 108.1 18.5 161 114-287 41-201 (434)
51 TIGR00710 efflux_Bcr_CflA drug 99.4 3.7E-11 7.9E-16 107.2 17.0 163 115-290 24-186 (385)
52 TIGR00881 2A0104 phosphoglycer 99.4 2.9E-12 6.4E-17 113.7 9.9 228 9-264 147-377 (379)
53 TIGR02718 sider_RhtX_FptX side 99.4 5.3E-11 1.2E-15 106.6 17.6 224 10-278 161-385 (390)
54 TIGR00792 gph sugar (Glycoside 99.4 2.8E-11 6E-16 110.1 15.9 206 9-262 170-383 (437)
55 COG2814 AraJ Arabinose efflux 99.3 2.6E-10 5.7E-15 99.6 20.5 215 10-280 165-382 (394)
56 PRK10473 multidrug efflux syst 99.3 4.4E-11 9.4E-16 107.2 15.7 168 110-290 17-184 (392)
57 PRK10213 nepI ribonucleoside t 99.3 1.3E-10 2.8E-15 104.2 18.5 159 118-289 42-200 (394)
58 TIGR00891 2A0112 putative sial 99.3 8.5E-11 1.8E-15 105.5 17.2 163 113-289 29-193 (405)
59 PRK15402 multidrug efflux syst 99.3 1.5E-10 3.2E-15 104.3 18.5 160 117-289 34-193 (406)
60 PLN00028 nitrate transmembrane 99.3 1.4E-10 3E-15 106.6 18.5 160 113-286 53-221 (476)
61 PRK11551 putative 3-hydroxyphe 99.3 4.6E-11 1E-15 107.5 14.7 161 115-288 34-194 (406)
62 PRK15034 nitrate/nitrite trans 99.3 1.7E-10 3.6E-15 104.0 18.0 186 85-284 246-454 (462)
63 PRK05122 major facilitator sup 99.3 1.6E-10 3.5E-15 103.8 18.0 159 118-292 238-396 (399)
64 PRK10054 putative transporter; 99.3 9.5E-11 2.1E-15 105.2 16.1 159 116-288 27-186 (395)
65 PRK10077 xylE D-xylose transpo 99.3 4.7E-10 1E-14 103.3 21.0 160 127-288 51-218 (479)
66 PRK11273 glpT sn-glycerol-3-ph 99.3 1.9E-10 4.2E-15 105.1 18.1 163 116-288 49-212 (452)
67 TIGR00887 2A0109 phosphate:H+ 99.3 2.8E-10 6E-15 105.4 19.3 145 136-287 60-227 (502)
68 TIGR00897 2A0118 polyol permea 99.3 6.2E-10 1.4E-14 100.2 20.4 181 86-281 217-398 (402)
69 TIGR00903 2A0129 major facilit 99.3 9E-11 2E-15 104.1 14.5 158 117-288 12-169 (368)
70 TIGR00711 efflux_EmrB drug res 99.3 2.9E-11 6.2E-16 111.4 11.7 165 113-290 19-183 (485)
71 TIGR00881 2A0104 phosphoglycer 99.3 2.9E-11 6.3E-16 107.3 10.9 161 115-288 14-175 (379)
72 TIGR00901 2A0125 AmpG-related 99.3 9.2E-11 2E-15 103.7 13.0 125 117-242 230-354 (356)
73 TIGR00710 efflux_Bcr_CflA drug 99.3 1.1E-09 2.3E-14 97.8 19.9 129 117-254 227-356 (385)
74 PRK14995 methyl viologen resis 99.3 1.6E-10 3.6E-15 106.7 15.1 164 113-289 23-187 (495)
75 PRK15462 dipeptide/tripeptide 99.2 3.8E-10 8.2E-15 102.8 16.9 155 111-278 24-183 (493)
76 PRK12307 putative sialic acid 99.2 3.1E-10 6.7E-15 102.9 16.5 145 113-270 35-179 (426)
77 PRK09874 drug efflux system pr 99.2 1E-09 2.2E-14 98.8 19.5 160 115-287 33-196 (408)
78 TIGR00712 glpT glycerol-3-phos 99.2 1.9E-10 4.1E-15 104.7 14.9 162 117-288 48-210 (438)
79 PRK10504 putative transporter; 99.2 4.5E-10 9.7E-15 103.2 17.3 164 111-287 25-188 (471)
80 PRK14995 methyl viologen resis 99.2 1.4E-09 3E-14 100.6 20.6 157 85-256 253-410 (495)
81 PRK15402 multidrug efflux syst 99.2 1.5E-09 3.3E-14 97.7 20.3 207 9-261 164-372 (406)
82 PRK03699 putative transporter; 99.2 3.3E-10 7.2E-15 101.7 15.6 158 115-287 224-382 (394)
83 PRK11102 bicyclomycin/multidru 99.2 2.7E-10 5.8E-15 101.5 15.0 159 117-288 12-170 (377)
84 PRK09874 drug efflux system pr 99.2 5.7E-10 1.2E-14 100.4 16.9 131 142-284 268-398 (408)
85 TIGR00879 SP MFS transporter, 99.2 4.7E-10 1E-14 102.7 16.5 148 130-288 70-220 (481)
86 PRK11652 emrD multidrug resist 99.2 1E-09 2.2E-14 98.4 17.9 160 118-290 30-189 (394)
87 PRK12382 putative transporter; 99.2 1.2E-09 2.6E-14 98.0 18.1 152 117-283 237-388 (392)
88 PRK11043 putative transporter; 99.2 1.2E-09 2.5E-14 98.4 18.0 200 9-258 157-356 (401)
89 PRK10504 putative transporter; 99.2 1.7E-09 3.6E-14 99.4 19.3 161 86-261 256-417 (471)
90 COG2814 AraJ Arabinose efflux 99.2 1.4E-09 3E-14 95.1 17.5 156 117-285 34-189 (394)
91 PRK10091 MFS transport protein 99.2 7.4E-10 1.6E-14 99.0 16.3 159 117-288 24-182 (382)
92 PRK10473 multidrug efflux syst 99.2 9.6E-10 2.1E-14 98.6 17.0 131 119-267 226-357 (392)
93 TIGR00900 2A0121 H+ Antiporter 99.2 8.3E-10 1.8E-14 97.5 16.2 155 117-279 20-174 (365)
94 COG2223 NarK Nitrate/nitrite t 99.2 8.4E-10 1.8E-14 95.8 15.4 187 84-282 211-399 (417)
95 KOG2532 Permease of the major 99.2 4E-10 8.7E-15 102.1 13.8 238 9-279 192-442 (466)
96 PRK11102 bicyclomycin/multidru 99.2 1.9E-09 4.2E-14 95.9 18.1 116 118-243 216-332 (377)
97 PRK10091 MFS transport protein 99.2 2.2E-09 4.7E-14 96.0 18.4 154 119-285 223-377 (382)
98 cd06174 MFS The Major Facilita 99.2 2.4E-09 5.2E-14 93.9 18.3 155 113-280 192-348 (352)
99 TIGR00902 2A0127 phenyl propri 99.2 2.4E-09 5.1E-14 95.7 18.5 174 84-277 198-372 (382)
100 PRK03893 putative sialic acid 99.2 9.4E-10 2E-14 101.7 16.3 161 114-288 38-198 (496)
101 TIGR00882 2A0105 oligosacchari 99.2 1E-09 2.2E-14 98.6 15.9 128 141-280 263-391 (396)
102 PF07690 MFS_1: Major Facilita 99.2 3.6E-10 7.8E-15 99.4 12.6 160 118-290 18-178 (352)
103 TIGR00892 2A0113 monocarboxyla 99.2 1.5E-09 3.3E-14 99.2 16.6 158 114-285 37-195 (455)
104 TIGR00900 2A0121 H+ Antiporter 99.2 1.4E-09 3E-14 96.1 16.0 132 117-260 232-364 (365)
105 TIGR00880 2_A_01_02 Multidrug 99.2 9.6E-10 2.1E-14 83.0 12.9 132 144-287 10-141 (141)
106 PRK10642 proline/glycine betai 99.2 1.4E-09 3.1E-14 100.3 16.6 169 114-287 34-215 (490)
107 TIGR00894 2A0114euk Na(+)-depe 99.2 1.4E-09 3E-14 99.9 15.8 151 126-287 71-222 (465)
108 PRK10406 alpha-ketoglutarate t 99.1 2.9E-09 6.4E-14 96.7 17.7 173 111-288 37-222 (432)
109 PRK15034 nitrate/nitrite trans 99.1 6.3E-09 1.4E-13 93.9 19.1 175 120-303 58-253 (462)
110 PRK03699 putative transporter; 99.1 7E-09 1.5E-13 93.1 19.5 151 115-278 26-177 (394)
111 TIGR00711 efflux_EmrB drug res 99.1 1E-09 2.2E-14 101.2 14.1 160 85-258 249-409 (485)
112 PRK09556 uhpT sugar phosphate 99.1 1.7E-09 3.6E-14 99.4 15.0 162 117-286 50-214 (467)
113 PRK11043 putative transporter; 99.1 4.7E-09 1E-13 94.4 17.6 153 120-285 30-182 (401)
114 PRK10207 dipeptide/tripeptide 99.1 3.7E-09 8E-14 97.3 17.0 149 111-271 29-181 (489)
115 TIGR00886 2A0108 nitrite extru 99.1 5.1E-09 1.1E-13 92.8 16.8 160 115-287 20-191 (366)
116 PRK10489 enterobactin exporter 99.1 1.4E-09 3.1E-14 98.3 13.3 164 116-288 37-200 (417)
117 PF11700 ATG22: Vacuole efflux 99.1 1.8E-08 3.9E-13 91.9 20.0 168 118-291 303-474 (477)
118 PRK15075 citrate-proton sympor 99.1 6.2E-09 1.4E-13 94.7 17.0 163 103-269 22-197 (434)
119 PRK08633 2-acyl-glycerophospho 99.1 3.8E-09 8.1E-14 107.5 17.1 155 120-287 257-413 (1146)
120 COG2271 UhpC Sugar phosphate p 99.1 1.7E-09 3.6E-14 93.9 12.1 162 117-291 50-216 (448)
121 TIGR00924 yjdL_sub1_fam amino 99.1 6.7E-09 1.5E-13 95.4 16.8 155 110-277 24-185 (475)
122 cd06174 MFS The Major Facilita 99.1 7.8E-09 1.7E-13 90.6 16.5 155 111-278 14-168 (352)
123 PRK11646 multidrug resistance 99.1 9.1E-09 2E-13 92.5 16.6 153 121-287 36-188 (400)
124 PRK11128 putative 3-phenylprop 99.1 2.1E-08 4.6E-13 89.6 18.6 174 83-276 197-371 (382)
125 TIGR00898 2A0119 cation transp 99.1 3.4E-09 7.4E-14 98.3 13.9 153 118-287 111-266 (505)
126 PRK05122 major facilitator sup 99.0 8.5E-09 1.9E-13 92.6 15.9 153 117-274 36-189 (399)
127 TIGR00890 2A0111 Oxalate/Forma 99.0 3.6E-09 7.7E-14 93.8 12.9 159 114-286 21-179 (377)
128 PRK10213 nepI ribonucleoside t 99.0 4.1E-08 8.9E-13 88.1 19.6 213 9-277 171-384 (394)
129 PRK11195 lysophospholipid tran 99.0 1.3E-08 2.9E-13 91.3 15.9 151 120-288 27-177 (393)
130 KOG0569 Permease of the major 99.0 3.9E-08 8.4E-13 88.7 18.6 138 140-287 68-207 (485)
131 PTZ00207 hypothetical protein; 99.0 3E-08 6.5E-13 92.1 18.1 161 114-284 45-205 (591)
132 PRK03633 putative MFS family t 99.0 4.6E-08 9.9E-13 87.4 18.9 146 117-278 221-366 (381)
133 PRK09705 cynX putative cyanate 99.0 4E-08 8.8E-13 88.1 18.4 148 113-274 26-174 (393)
134 TIGR00899 2A0120 sugar efflux 99.0 1.3E-08 2.8E-13 90.5 15.0 157 119-288 20-180 (375)
135 PRK12382 putative transporter; 99.0 2.6E-08 5.7E-13 89.3 16.7 146 118-268 37-183 (392)
136 PRK06814 acylglycerophosphoeth 99.0 1.9E-08 4E-13 102.4 17.2 139 140-288 60-198 (1140)
137 TIGR00897 2A0118 polyol permea 99.0 2.2E-08 4.7E-13 90.2 15.8 140 117-265 34-174 (402)
138 PF07690 MFS_1: Major Facilita 99.0 2.3E-09 4.9E-14 94.3 9.2 126 115-250 225-352 (352)
139 PRK15403 multidrug efflux syst 99.0 2.1E-07 4.5E-12 84.1 21.6 117 9-163 167-286 (413)
140 TIGR00896 CynX cyanate transpo 99.0 1.8E-08 3.9E-13 89.1 14.3 159 84-261 190-350 (355)
141 TIGR01272 gluP glucose/galacto 99.0 3.2E-08 7E-13 85.7 15.4 137 116-268 160-299 (310)
142 PRK06814 acylglycerophosphoeth 99.0 1.8E-08 4E-13 102.4 15.9 243 9-286 171-424 (1140)
143 COG2223 NarK Nitrate/nitrite t 98.9 2.3E-08 5E-13 86.9 14.0 154 119-284 37-193 (417)
144 PRK09952 shikimate transporter 98.9 4.5E-08 9.9E-13 89.1 16.6 139 145-288 77-223 (438)
145 PRK11646 multidrug resistance 98.9 7.7E-08 1.7E-12 86.5 17.7 45 216-260 316-360 (400)
146 PRK09584 tppB putative tripept 98.9 7.8E-08 1.7E-12 88.9 18.0 153 111-275 36-192 (500)
147 TIGR00885 fucP L-fucose:H+ sym 98.9 7.3E-08 1.6E-12 86.9 17.3 130 117-256 24-153 (410)
148 PRK08633 2-acyl-glycerophospho 98.9 5E-08 1.1E-12 99.4 18.0 111 140-259 55-165 (1146)
149 KOG0255 Synaptic vesicle trans 98.9 4E-08 8.7E-13 91.5 16.1 137 136-288 122-258 (521)
150 PRK10133 L-fucose transporter; 98.9 5.1E-08 1.1E-12 88.7 16.2 137 121-273 284-422 (438)
151 PRK11195 lysophospholipid tran 98.9 1.9E-07 4.1E-12 83.8 19.2 150 119-283 228-379 (393)
152 PRK10429 melibiose:sodium symp 98.9 1.2E-07 2.6E-12 87.3 18.2 116 140-262 274-396 (473)
153 TIGR00901 2A0125 AmpG-related 98.9 3.9E-08 8.4E-13 87.0 14.4 160 117-288 9-182 (356)
154 TIGR00886 2A0108 nitrite extru 98.9 7.2E-09 1.6E-13 91.8 9.7 119 117-245 246-365 (366)
155 PRK11902 ampG muropeptide tran 98.9 6.3E-08 1.4E-12 87.2 15.9 165 111-288 14-185 (402)
156 PRK11652 emrD multidrug resist 98.9 1.3E-07 2.9E-12 84.8 17.4 40 215-255 317-356 (394)
157 PF03825 Nuc_H_symport: Nucleo 98.9 2E-07 4.3E-12 83.4 18.2 189 85-287 201-398 (400)
158 PF06609 TRI12: Fungal trichot 98.9 4.4E-07 9.5E-12 84.1 20.7 109 136-254 353-462 (599)
159 PRK09848 glucuronide transport 98.9 6.1E-08 1.3E-12 88.6 15.1 162 84-261 221-390 (448)
160 PF13347 MFS_2: MFS/sugar tran 98.9 5E-07 1.1E-11 82.1 20.3 163 83-261 217-386 (428)
161 TIGR00885 fucP L-fucose:H+ sym 98.9 1.9E-07 4.1E-12 84.2 17.4 103 143-260 280-382 (410)
162 PRK11010 ampG muropeptide tran 98.9 9.8E-08 2.1E-12 88.1 15.6 159 117-288 33-198 (491)
163 TIGR00788 fbt folate/biopterin 98.8 1.8E-07 3.8E-12 85.9 16.7 132 125-261 282-415 (468)
164 PRK15011 sugar efflux transpor 98.8 2.9E-07 6.4E-12 82.6 17.5 156 121-289 41-199 (393)
165 TIGR00896 CynX cyanate transpo 98.8 2.5E-07 5.5E-12 81.7 16.5 162 109-288 13-176 (355)
166 PRK03633 putative MFS family t 98.8 2.7E-07 5.9E-12 82.4 16.8 133 113-258 23-155 (381)
167 PRK09669 putative symporter Ya 98.8 3.5E-07 7.5E-12 83.5 17.3 111 142-262 274-391 (444)
168 TIGR00806 rfc RFC reduced fola 98.8 8.5E-07 1.8E-11 79.5 18.8 155 117-287 47-205 (511)
169 KOG2532 Permease of the major 98.8 4.5E-07 9.8E-12 82.4 16.9 166 127-303 69-239 (466)
170 PRK09528 lacY galactoside perm 98.8 2.9E-07 6.3E-12 83.3 15.8 160 117-286 31-193 (420)
171 PF05977 MFS_3: Transmembrane 98.8 2.8E-07 6.1E-12 85.1 15.7 130 142-278 55-184 (524)
172 PRK10054 putative transporter; 98.8 2.1E-07 4.6E-12 83.6 13.9 117 147-275 259-375 (395)
173 TIGR00883 2A0106 metabolite-pr 98.7 3.2E-07 6.9E-12 81.8 14.8 137 146-287 49-193 (394)
174 COG2270 Permeases of the major 98.7 3.4E-07 7.4E-12 79.9 13.9 166 111-290 267-434 (438)
175 COG2807 CynX Cyanate permease 98.7 9.3E-07 2E-11 75.7 16.1 218 9-281 162-382 (395)
176 TIGR00882 2A0105 oligosacchari 98.7 8.9E-07 1.9E-11 79.5 17.0 163 117-287 23-186 (396)
177 TIGR01301 GPH_sucrose GPH fami 98.7 4.9E-07 1.1E-11 82.3 15.1 171 116-288 24-222 (477)
178 TIGR00805 oat sodium-independe 98.7 1.1E-07 2.3E-12 90.2 11.3 172 115-288 52-284 (633)
179 PRK10133 L-fucose transporter; 98.7 1.1E-06 2.4E-11 80.0 17.6 130 113-252 43-172 (438)
180 KOG0254 Predicted transporter 98.7 7.8E-07 1.7E-11 82.7 16.8 137 137-287 94-232 (513)
181 KOG2615 Permease of the major 98.7 1.7E-07 3.6E-12 80.5 10.8 141 134-287 70-216 (451)
182 KOG1330 Sugar transporter/spin 98.7 1.1E-07 2.3E-12 83.8 9.8 140 112-259 260-412 (493)
183 KOG1330 Sugar transporter/spin 98.7 1.3E-08 2.8E-13 89.4 4.2 156 122-290 59-215 (493)
184 PF05977 MFS_3: Transmembrane 98.7 1.7E-06 3.6E-11 80.1 18.2 150 118-280 240-390 (524)
185 PF06609 TRI12: Fungal trichot 98.7 4.4E-07 9.6E-12 84.1 14.4 153 119-286 67-220 (599)
186 PF01306 LacY_symp: LacY proto 98.7 5.4E-07 1.2E-11 79.8 13.4 189 84-289 213-405 (412)
187 KOG2504 Monocarboxylate transp 98.7 4.3E-08 9.2E-13 90.1 6.3 182 85-285 292-476 (509)
188 COG2211 MelB Na+/melibiose sym 98.6 2.5E-06 5.4E-11 76.6 17.2 155 139-305 279-456 (467)
189 TIGR02718 sider_RhtX_FptX side 98.6 1.7E-06 3.7E-11 77.6 16.2 174 105-286 10-186 (390)
190 PRK11462 putative transporter; 98.6 3.8E-06 8.2E-11 77.0 17.7 28 140-167 271-298 (460)
191 TIGR01301 GPH_sucrose GPH fami 98.6 5.1E-06 1.1E-10 75.7 17.1 149 140-289 313-476 (477)
192 TIGR00902 2A0127 phenyl propri 98.5 3.6E-06 7.7E-11 75.3 15.2 146 114-272 22-167 (382)
193 KOG3764 Vesicular amine transp 98.5 3.4E-07 7.4E-12 79.1 7.9 140 140-291 114-254 (464)
194 TIGR00792 gph sugar (Glycoside 98.5 1.4E-06 3E-11 79.3 12.2 164 118-288 22-198 (437)
195 PRK11128 putative 3-phenylprop 98.5 5.2E-06 1.1E-10 74.2 15.2 160 114-288 22-182 (382)
196 KOG2504 Monocarboxylate transp 98.5 5.6E-06 1.2E-10 76.3 15.1 161 115-289 65-226 (509)
197 COG0738 FucP Fucose permease [ 98.5 1.3E-05 2.8E-10 69.8 16.0 171 83-274 228-399 (422)
198 PF00083 Sugar_tr: Sugar (and 98.4 1.6E-09 3.4E-14 99.0 -9.3 139 139-287 53-194 (451)
199 PF06813 Nodulin-like: Nodulin 98.4 2E-05 4.3E-10 65.4 15.3 137 112-257 18-155 (250)
200 KOG2533 Permease of the major 98.3 9.5E-06 2.1E-10 74.2 13.1 162 125-299 75-244 (495)
201 COG3104 PTR2 Dipeptide/tripept 98.3 1.2E-05 2.6E-10 72.0 11.7 142 128-280 58-202 (498)
202 PF13347 MFS_2: MFS/sugar tran 98.3 2.1E-06 4.5E-11 78.0 7.2 164 118-286 24-200 (428)
203 PRK09669 putative symporter Ya 98.2 3E-05 6.5E-10 70.8 14.1 160 120-286 34-206 (444)
204 KOG4686 Predicted sugar transp 98.2 4.1E-05 8.9E-10 63.7 12.4 125 122-261 291-416 (459)
205 KOG2816 Predicted transporter 98.2 8.6E-05 1.9E-09 67.5 15.5 137 143-294 73-209 (463)
206 PRK11462 putative transporter; 98.1 0.00016 3.4E-09 66.4 16.5 160 121-287 35-207 (460)
207 KOG0252 Inorganic phosphate tr 98.1 2.2E-05 4.8E-10 69.5 9.4 99 134-237 86-184 (538)
208 PRK10429 melibiose:sodium symp 98.1 0.00015 3.1E-09 66.9 15.4 159 122-287 33-204 (473)
209 TIGR00805 oat sodium-independe 98.0 2E-05 4.4E-10 74.9 8.6 87 84-175 323-412 (633)
210 PRK10207 dipeptide/tripeptide 98.0 0.00089 1.9E-08 61.9 18.6 106 145-253 322-435 (489)
211 PTZ00207 hypothetical protein; 98.0 0.0012 2.5E-08 62.0 19.2 74 216-290 471-558 (591)
212 COG0738 FucP Fucose permease [ 98.0 0.00082 1.8E-08 58.9 16.7 132 115-257 32-164 (422)
213 TIGR00924 yjdL_sub1_fam amino 97.9 0.0043 9.3E-08 57.2 22.2 73 213-285 397-469 (475)
214 PRK09584 tppB putative tripept 97.9 0.0011 2.3E-08 61.6 18.3 136 146-284 330-479 (500)
215 PF11700 ATG22: Vacuole efflux 97.9 0.00099 2.2E-08 61.2 16.5 142 138-289 76-252 (477)
216 PRK09848 glucuronide transport 97.8 0.0013 2.8E-08 60.1 16.9 45 120-165 33-81 (448)
217 TIGR00788 fbt folate/biopterin 97.8 0.00065 1.4E-08 62.5 14.3 155 120-288 50-212 (468)
218 PF05631 DUF791: Protein of un 97.8 0.006 1.3E-07 52.9 19.0 157 121-290 59-222 (354)
219 TIGR00926 2A1704 Peptide:H+ sy 97.7 0.0081 1.8E-07 57.3 19.7 152 123-279 15-177 (654)
220 TIGR00889 2A0110 nucleoside tr 97.7 0.0013 2.8E-08 59.7 13.6 50 120-170 27-77 (418)
221 KOG0253 Synaptic vesicle trans 97.6 0.00099 2.2E-08 57.8 11.3 153 120-288 102-254 (528)
222 KOG2563 Permease of the major 97.5 0.00096 2.1E-08 59.2 10.3 151 134-293 303-459 (480)
223 COG2211 MelB Na+/melibiose sym 97.5 0.0027 5.8E-08 57.4 13.3 137 117-261 33-177 (467)
224 PF03825 Nuc_H_symport: Nucleo 97.5 0.0022 4.8E-08 57.6 12.7 51 115-166 21-72 (400)
225 PF12832 MFS_1_like: MFS_1 lik 97.4 0.00063 1.4E-08 45.5 6.4 57 110-167 14-70 (77)
226 KOG2563 Permease of the major 97.4 0.0058 1.3E-07 54.4 13.3 123 133-259 80-202 (480)
227 COG2807 CynX Cyanate permease 97.3 0.014 3E-07 50.7 14.3 158 112-287 28-186 (395)
228 PF01306 LacY_symp: LacY proto 97.2 0.0013 2.8E-08 58.7 8.0 45 120-165 31-76 (412)
229 KOG3626 Organic anion transpor 97.2 0.0014 2.9E-08 62.2 7.8 142 10-167 320-466 (735)
230 PF03092 BT1: BT1 family; Int 97.2 0.0044 9.6E-08 56.4 10.9 42 220-261 341-382 (433)
231 PF03209 PUCC: PUCC protein; 97.2 0.016 3.4E-07 51.3 13.7 113 146-258 28-150 (403)
232 KOG2325 Predicted transporter/ 97.1 0.021 4.6E-07 52.0 13.9 140 139-288 78-233 (488)
233 PF03092 BT1: BT1 family; Int 97.0 0.019 4.2E-07 52.3 13.6 158 120-288 14-179 (433)
234 PF03137 OATP: Organic Anion T 97.0 0.00015 3.3E-09 67.5 0.0 73 83-160 297-370 (539)
235 PF05978 UNC-93: Ion channel r 96.8 0.039 8.5E-07 42.4 11.7 128 112-252 12-144 (156)
236 PF06963 FPN1: Ferroportin1 (F 96.0 0.83 1.8E-05 41.5 17.1 129 117-248 279-407 (432)
237 COG0477 ProP Permeases of the 96.0 0.39 8.4E-06 40.4 14.6 121 119-250 25-149 (338)
238 KOG2615 Permease of the major 95.9 0.055 1.2E-06 47.5 8.5 37 219-255 374-410 (451)
239 KOG3764 Vesicular amine transp 95.9 0.027 5.8E-07 49.6 6.6 215 10-278 224-448 (464)
240 PRK15462 dipeptide/tripeptide 95.7 0.87 1.9E-05 42.2 16.3 45 208-252 388-433 (493)
241 PF07672 MFS_Mycoplasma: Mycop 95.4 0.85 1.8E-05 38.0 13.4 22 9-30 38-59 (267)
242 KOG3098 Uncharacterized conser 95.3 2.2 4.7E-05 39.0 17.0 127 126-254 273-409 (461)
243 KOG3762 Predicted transporter 95.2 0.046 9.9E-07 50.1 5.9 126 138-275 412-538 (618)
244 TIGR00769 AAA ADP/ATP carrier 95.2 2.6 5.5E-05 38.9 18.3 41 217-257 149-189 (472)
245 COG2270 Permeases of the major 95.2 0.65 1.4E-05 41.5 12.7 135 145-288 71-224 (438)
246 TIGR00806 rfc RFC reduced fola 94.9 0.087 1.9E-06 48.1 6.8 50 109-159 275-325 (511)
247 KOG2816 Predicted transporter 94.4 2.8 6.2E-05 38.5 15.5 121 124-258 270-391 (463)
248 KOG0637 Sucrose transporter an 93.9 0.034 7.4E-07 49.8 1.9 131 117-249 53-195 (498)
249 PF03137 OATP: Organic Anion T 93.8 0.011 2.4E-07 55.3 -1.4 64 115-179 22-85 (539)
250 PF06779 DUF1228: Protein of u 93.6 0.82 1.8E-05 31.0 7.9 61 118-179 14-74 (85)
251 PF01770 Folate_carrier: Reduc 93.2 6 0.00013 35.6 14.8 34 146-179 55-88 (412)
252 PF13000 Acatn: Acetyl-coenzym 92.5 2.4 5.2E-05 39.0 11.3 48 118-166 22-74 (544)
253 KOG4686 Predicted sugar transp 92.1 0.009 1.9E-07 50.2 -3.9 41 219-259 158-198 (459)
254 PF03209 PUCC: PUCC protein; 92.0 8.8 0.00019 34.4 15.2 57 123-180 236-293 (403)
255 PF01770 Folate_carrier: Reduc 91.9 0.29 6.3E-06 43.8 4.9 30 8-37 157-186 (412)
256 PF06963 FPN1: Ferroportin1 (F 91.9 9.8 0.00021 34.7 15.8 52 231-282 147-198 (432)
257 KOG3762 Predicted transporter 91.1 0.26 5.6E-06 45.4 3.8 57 111-168 26-82 (618)
258 PF03219 TLC: TLC ATP/ADP tran 91.0 11 0.00025 34.9 14.4 42 217-258 164-205 (491)
259 TIGR01272 gluP glucose/galacto 90.9 1.4 2.9E-05 38.2 8.1 70 219-288 32-118 (310)
260 KOG1237 H+/oligopeptide sympor 90.5 16 0.00035 34.7 16.4 156 120-278 62-239 (571)
261 KOG3574 Acetyl-CoA transporter 90.4 3.4 7.3E-05 36.8 9.7 46 118-166 52-102 (510)
262 PRK03612 spermidine synthase; 90.1 15 0.00033 34.5 14.6 23 234-256 146-168 (521)
263 KOG3626 Organic anion transpor 89.3 4.8 0.0001 39.0 10.7 79 100-179 101-179 (735)
264 KOG1479 Nucleoside transporter 88.1 6.4 0.00014 35.3 10.0 27 216-242 362-388 (406)
265 PF00854 PTR2: POT family; In 87.3 6.5 0.00014 35.0 10.0 64 216-279 52-118 (372)
266 TIGR00939 2a57 Equilibrative N 86.7 17 0.00037 33.2 12.4 35 216-250 391-425 (437)
267 PF01733 Nucleoside_tran: Nucl 86.3 0.18 4E-06 43.7 -0.4 30 216-245 267-296 (309)
268 KOG3098 Uncharacterized conser 85.2 27 0.00058 32.2 12.6 109 134-255 52-160 (461)
269 KOG3810 Micronutrient transpor 81.8 23 0.0005 31.3 10.1 56 109-164 247-303 (433)
270 TIGR00939 2a57 Equilibrative N 81.1 45 0.00097 30.6 13.0 16 146-161 59-74 (437)
271 PF02487 CLN3: CLN3 protein; 80.3 13 0.00027 33.6 8.5 16 145-160 72-87 (402)
272 PF02487 CLN3: CLN3 protein; 80.2 12 0.00026 33.7 8.3 38 215-252 353-390 (402)
273 COG3104 PTR2 Dipeptide/tripept 77.4 61 0.0013 30.1 19.6 139 146-286 338-489 (498)
274 KOG2325 Predicted transporter/ 74.7 7.6 0.00017 35.8 5.7 58 219-276 410-467 (488)
275 PF11947 DUF3464: Protein of u 70.2 37 0.0008 25.9 7.5 36 211-246 108-143 (153)
276 KOG1479 Nucleoside transporter 68.2 93 0.002 28.1 17.4 8 224-231 143-150 (406)
277 PF14715 FixP_N: N-terminal do 67.0 9.5 0.00021 23.0 3.1 30 6-35 19-48 (51)
278 TIGR00986 3a0801s05tom22 mitoc 64.6 23 0.0005 26.6 5.3 17 223-239 59-75 (145)
279 COG5336 Uncharacterized protei 60.9 38 0.00081 24.1 5.5 23 147-169 57-80 (116)
280 KOG2881 Predicted membrane pro 60.7 54 0.0012 27.4 7.2 30 284-313 154-184 (294)
281 PF03547 Mem_trans: Membrane t 56.7 99 0.0021 27.5 9.3 11 149-159 12-22 (385)
282 PF10183 ESSS: ESSS subunit of 52.7 27 0.00059 24.8 3.9 35 258-292 55-89 (105)
283 PRK10697 DNA-binding transcrip 51.4 28 0.00062 25.3 3.9 28 11-38 36-69 (118)
284 PF04024 PspC: PspC domain; I 50.5 17 0.00036 22.9 2.3 29 8-36 28-60 (61)
285 PF04281 Tom22: Mitochondrial 49.7 87 0.0019 23.5 6.3 17 223-239 61-77 (137)
286 KOG4332 Predicted sugar transp 47.2 1.9E+02 0.004 25.0 11.1 19 146-164 86-104 (454)
287 PF13000 Acatn: Acetyl-coenzym 46.1 2.6E+02 0.0057 26.3 10.5 40 215-254 423-462 (544)
288 KOG3574 Acetyl-CoA transporter 43.7 29 0.00062 31.2 3.4 37 218-254 390-426 (510)
289 PF07857 DUF1632: CEO family ( 38.7 2.4E+02 0.0052 23.7 8.1 33 219-251 65-97 (254)
290 KOG4830 Predicted sugar transp 37.5 40 0.00087 28.6 3.2 45 119-164 40-93 (412)
291 cd02432 Nodulin-21_like_1 Nodu 37.1 2.3E+02 0.005 23.1 9.4 24 145-168 174-197 (218)
292 PRK10263 DNA translocase FtsK; 37.1 3.8E+02 0.0081 28.6 10.3 15 146-160 66-80 (1355)
293 PF15061 DUF4538: Domain of un 34.7 45 0.00098 20.7 2.3 22 9-30 3-24 (58)
294 PF10183 ESSS: ESSS subunit of 33.9 72 0.0016 22.6 3.7 27 10-36 58-85 (105)
295 COG3389 Uncharacterized protei 33.8 2.7E+02 0.0059 22.9 7.6 21 146-166 42-62 (277)
296 COG1288 Predicted membrane pro 33.3 1.5E+02 0.0033 27.1 6.2 20 10-29 217-236 (481)
297 COG4736 CcoQ Cbb3-type cytochr 31.6 49 0.0011 20.8 2.2 24 280-303 27-50 (60)
298 PF14241 DUF4341: Domain of un 29.1 65 0.0014 20.3 2.5 18 7-24 42-59 (62)
299 COG2119 Predicted membrane pro 26.5 3.1E+02 0.0067 21.8 6.2 29 141-169 143-171 (190)
300 TIGR02978 phageshock_pspC phag 26.4 1E+02 0.0022 22.6 3.5 29 10-38 30-64 (121)
301 PF02990 EMP70: Endomembrane p 25.7 4.3E+02 0.0094 24.9 8.4 11 85-95 252-262 (521)
302 COG5336 Uncharacterized protei 25.4 2.6E+02 0.0056 20.0 5.1 33 228-260 37-69 (116)
303 PF14068 YuiB: Putative membra 25.2 2.5E+02 0.0054 19.7 5.2 28 135-163 71-98 (102)
304 TIGR00782 ccoP cytochrome c ox 25.1 69 0.0015 27.4 2.8 27 7-33 26-52 (285)
305 PF13493 DUF4118: Domain of un 24.2 1.1E+02 0.0024 21.2 3.4 18 145-162 88-105 (105)
306 COG3202 ATP/ADP translocase [E 23.9 6.1E+02 0.013 23.8 15.2 42 217-258 168-209 (509)
307 PF05631 DUF791: Protein of un 22.4 5.6E+02 0.012 22.8 8.5 51 104-157 253-303 (354)
308 PF06123 CreD: Inner membrane 22.2 6.2E+02 0.013 23.3 11.8 35 148-182 307-341 (430)
309 COG4708 Predicted membrane pro 22.0 1.4E+02 0.0031 22.5 3.4 24 140-163 142-165 (169)
310 TIGR00880 2_A_01_02 Multidrug 20.8 3E+02 0.0066 19.2 6.6 26 140-165 95-120 (141)
311 PF04226 Transgly_assoc: Trans 20.7 2E+02 0.0043 17.0 4.3 17 145-161 4-20 (48)
312 PF12732 YtxH: YtxH-like prote 20.3 1.5E+02 0.0033 19.2 3.1 26 274-299 10-35 (74)
No 1
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.6e-42 Score=303.73 Aligned_cols=291 Identities=31% Similarity=0.584 Sum_probs=251.0
Q ss_pred CCchHHHHhhhhHHHHHHHHHhhcCCCChHHHHh-cCCHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHh-ccccchh
Q 020863 8 PGTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFM-KSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRK-KKTVRYL 85 (320)
Q Consensus 8 ~~~WR~~f~i~~~~~l~~~~~~~~lpESp~~l~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 85 (320)
++.|++++.+..+|+++.++..+++|||||||.. |||++||++.++++|..++.+++.+++.++.+++... +++.+..
T Consensus 180 ~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~ 259 (485)
T KOG0569|consen 180 EDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLR 259 (485)
T ss_pred CcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHH
Confidence 4579999999999999999999999999999998 8999999999999999987777776666555444333 2566789
Q ss_pred hhccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHH
Q 020863 86 DVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLA 165 (320)
Q Consensus 86 ~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~ 165 (320)
+++++++.|+.+.+++.+...++++|++.+.+|...++++.|++... +.+.+...+....+.++++.+++||+|||+++
T Consensus 260 ~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~-a~~an~~~g~v~~~~t~~~~~lid~~gRRpLl 338 (485)
T KOG0569|consen 260 QLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEE-AQYANLGIGIVNLLSTLVSPFLIDRLGRRPLL 338 (485)
T ss_pred HHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHH
Confidence 99999999999999999999999999999999999999999997655 45566677777999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHH
Q 020863 166 LSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWIS 245 (320)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~ 245 (320)
+.+..++.++.+.+........... .+..+..+.+..++..+++.|++|++|.+.+|+||++.|+.+.+.+..++|+.
T Consensus 339 l~~~~~~~~~~~~~~~~~~l~~~~~--~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~ 416 (485)
T KOG0569|consen 339 LISLSLMAVALLLMSIALFLSNSFG--SWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLS 416 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHH
Confidence 9988887777766655433322111 23445567778889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHhcc
Q 020863 246 NLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPETQGLTFLEVEQMWKER 302 (320)
Q Consensus 246 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~g~~~~~~~~~~~~~ 302 (320)
+++....++++.+..|. ..|+++.+.+.+..++.++++||||||+.+||.+.++++
T Consensus 417 ~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 417 NFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred HHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHHhC
Confidence 99999999999999986 778888888888999999999999999999999999887
No 2
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=3.8e-32 Score=250.87 Aligned_cols=293 Identities=38% Similarity=0.652 Sum_probs=234.7
Q ss_pred chHHHHhhhhHHHHHHHHHhhcCCCChHHHHhcCCHHHHHHHHHHhcC--hhhhHHHHHHHHHHHHHHHHh-ccccchhh
Q 020863 10 TWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYD--IARLEDEIDHLSAAAEEELRK-KKTVRYLD 86 (320)
Q Consensus 10 ~WR~~f~i~~~~~l~~~~~~~~lpESp~~l~~~~~~~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 86 (320)
+||+++.+..+|+++..+...++||||||+.++|+.+++++.+++++. ..+.+.+.++++.....+... +.+..+.+
T Consensus 207 ~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (513)
T KOG0254|consen 207 GWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGE 286 (513)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHH
Confidence 799999999999999988888999999999999999999999999988 445566665555222222111 11223455
Q ss_pred hccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHH
Q 020863 87 VFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLAL 166 (320)
Q Consensus 87 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~ 166 (320)
+++ +..++....++.++.++|++|++...+|.+++++..|..... ...++..++.++++++++.++.||+|||++++
T Consensus 287 l~~-~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~--~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll 363 (513)
T KOG0254|consen 287 LFS-PKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT--FLASIILGVVNFLGTLVATYLVDRFGRRKLLL 363 (513)
T ss_pred hcC-cchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch--HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 555 667787888889999999999999999999999999987654 44566667778899999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHhcCCCC-CCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHH
Q 020863 167 SSLAGVIISLVLLSWAFISGSSAS-SSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWIS 245 (320)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~ 245 (320)
.+...+.++.+.+........... ......+..+.+..++...++.+.++++|.+.+|+||.+.|+++.+++...++..
T Consensus 364 ~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~ 443 (513)
T KOG0254|consen 364 FGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLW 443 (513)
T ss_pred HhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHH
Confidence 998888888877766554432211 2234456777788888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHH-HHHhhcccCCCCCHHHHHHHHhccccc
Q 020863 246 NLIVAQTFLTVAELVGTGATFLILAGIAVLAVV-FVILFVPETQGLTFLEVEQMWKERAWG 305 (320)
Q Consensus 246 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~pet~g~~~~~~~~~~~~~~~~ 305 (320)
+++....++......+.+..|..+++++.+..+ ++++++|||||+++||+++.+.++.+.
T Consensus 444 ~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~~~~~~~~ 504 (513)
T KOG0254|consen 444 NFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINELFEEGIKP 504 (513)
T ss_pred HHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHHHHcCCch
Confidence 999888888777665434567777766666666 788899999999999999999877654
No 3
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.97 E-value=3.7e-30 Score=237.42 Aligned_cols=276 Identities=23% Similarity=0.338 Sum_probs=173.2
Q ss_pred CchHHHHhhhhHHHHHHHHHhhcCCCChHHHHhcCCHH-HHHHHHHHhcChhhhHHHHHHHHHHHHHHHHhccccchhhh
Q 020863 9 GTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKE-KAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDV 87 (320)
Q Consensus 9 ~~WR~~f~i~~~~~l~~~~~~~~lpESp~~l~~~~~~~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (320)
.+||++|.++++|+++.+++++++||||||+..|+|++ ++.+.+++.++.+..+ +.++..+.+ ++. +....+++++
T Consensus 201 ~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~-~~~-~~~~~~~~~l 277 (502)
T TIGR00887 201 YMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEA-EPDEVEKAS-TAV-EVPKASWSDF 277 (502)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhcccccc-Ccccccchh-ccc-cchhhhHHHH
Confidence 36999999999999999888999999999999888864 5777676665432111 111100000 000 0011246666
Q ss_pred ccch---hhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHHhCCCCcHHH-----------HHHHHHHHHHHHHHHHHHH
Q 020863 88 FKSK---EIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLA-----------LLLSLAVAGTNAVGTIVGI 153 (320)
Q Consensus 88 ~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-----------~~~~~~~~~~~~~~~l~~g 153 (320)
++++ +.++..+....... .+...++....+.|+++++.|.+..... ........+..+++.++++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 356 (502)
T TIGR00887 278 FTHFFKWRHGKHLLGTAGSWF-LLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTV 356 (502)
T ss_pred HHHHhhhHHHHHHHHHHHHHH-HHHHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6532 22232222221222 2222334455678998888887643110 1112233334566888999
Q ss_pred HHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhh
Q 020863 154 YLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGI 233 (320)
Q Consensus 154 ~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~ 233 (320)
+++||+|||++++.+.....++...+......... ... +....++..++..+.++..+.+.+|++|++.|++
T Consensus 357 ~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~------~~~--~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~ 428 (502)
T TIGR00887 357 FLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLST------HGF--LAIYVLAQFFANFGPNATTFIVPGEVFPTRYRST 428 (502)
T ss_pred HHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcch------hHH--HHHHHHHHHHHhcCCCchhhhhhhccCchhHHHH
Confidence 99999999998876665555554444332211000 011 1112222233456677888899999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH----------hcchhHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHH
Q 020863 234 CGGMSATVNWISNLIVAQTFLTVAEL----------VGTGATFLILAGIAVLAVVFVILFVPETQGLTFLEVEQ 297 (320)
Q Consensus 234 ~~gi~~~~~~~~~~~~~~~~~~~~~~----------~g~~~~~~~~~~~~~~~~~~~~~~~pet~g~~~~~~~~ 297 (320)
+.|+++..+++++++++.+++.+.+. .+...+|.+++++++++.++ ++++|||||+++||+++
T Consensus 429 ~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~-~~~lpEt~~~~leei~~ 501 (502)
T TIGR00887 429 AHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILF-TLLIPETKGKSLEELSG 501 (502)
T ss_pred HHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHH-heEeccCCCCCHHhhhC
Confidence 99999999999999999999887763 23345677777777766554 46789999999999875
No 4
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.97 E-value=5.1e-36 Score=273.17 Aligned_cols=283 Identities=36% Similarity=0.663 Sum_probs=206.6
Q ss_pred CchHHHHhhhhHHHHHHHHHhhcCCCChHHHHhcCCHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHhccccchhhhc
Q 020863 9 GTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVF 88 (320)
Q Consensus 9 ~~WR~~f~i~~~~~l~~~~~~~~lpESp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 88 (320)
+.||+.+.++++++++.++.+.++||||||+..|+|.|||++.++++++.+..+++.+++.++.++.. +++.++.+++
T Consensus 168 ~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~ 245 (451)
T PF00083_consen 168 WGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQ--ESKASWRDLF 245 (451)
T ss_pred ccccccccccccccccccccccccccccceeccccccccccccccccccccccccccccccccccccc--ccceeeeecc
Confidence 46999999999999998888899999999999999999999999997665444444333332221111 1124567788
Q ss_pred cchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHH
Q 020863 89 KSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSS 168 (320)
Q Consensus 89 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~ 168 (320)
++++.++.++..+.+..+.++.+++...+|.+.+.+..+.+.. ...+....+...++.+++.+++||+|||+++..+
T Consensus 246 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~ 322 (451)
T PF00083_consen 246 RNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS---FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIG 322 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc
Confidence 8766555666666666667777888888899999988887654 2334445555778888889999999999988777
Q ss_pred hHHHHHHHHHHH-HHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHH
Q 020863 169 LAGVIISLVLLS-WAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNL 247 (320)
Q Consensus 169 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~ 247 (320)
...+.++...+. ......... .......+....++...+..+++++.+.+.+|+||++.|+++.|++...++++++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~ 399 (451)
T PF00083_consen 323 LLLMAICSLILGIIFFLGVSSS---SWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGF 399 (451)
T ss_pred cccccccccccccccccccccc---cccccccceeeeecccccccccccccccccccccccccccccccccccccccccc
Confidence 666555554443 111111110 0011222233333445566678899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHH
Q 020863 248 IVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPETQGLTFLEVEQMW 299 (320)
Q Consensus 248 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~g~~~~~~~~~~ 299 (320)
+++.+.+.+.+..+....+.++++++++..+++++++|||||++++|++++|
T Consensus 400 i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~~f 451 (451)
T PF00083_consen 400 IIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQEMF 451 (451)
T ss_pred ccccccccccccccccccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHhhC
Confidence 9988888777766645677777888888888888999999999999999874
No 5
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=5.3e-28 Score=202.37 Aligned_cols=267 Identities=20% Similarity=0.251 Sum_probs=173.2
Q ss_pred chHHHHhhhhHHHHHHHHHhhcCCCChHHHHhcCCHHHHHHHHHHhcChhhhHH-----------HHHHHHHHHHHH-HH
Q 020863 10 TWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLED-----------EIDHLSAAAEEE-LR 77 (320)
Q Consensus 10 ~WR~~f~i~~~~~l~~~~~~~~lpESp~~l~~~~~~~~a~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~-~~ 77 (320)
+|||.....++|..+...+..|+||||||.+.+|+++||.+.++++++.|+.+- +.++.....++. .+
T Consensus 228 gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~ 307 (528)
T KOG0253|consen 228 GWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSS 307 (528)
T ss_pred hHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhc
Confidence 799999998899888888899999999999999999999999999988765321 111100000000 00
Q ss_pred hcc--ccchhhhccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHHhC-------------------CCCcHHHHH
Q 020863 78 KKK--TVRYLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAG-------------------FQSNQLALL 136 (320)
Q Consensus 78 ~~~--~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g-------------------~~~~~~~~~ 136 (320)
..+ .....+++ .|++|+..+....++....+. |+......+.+.+.+. -.+....+.
T Consensus 308 a~ke~rg~~~nLl-sp~lrkttlllw~iwfgnafs-yyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYr 385 (528)
T KOG0253|consen 308 AAKEVRGGTTNLL-SPKLRKTTLLLWRIWFGNAFS-YYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYR 385 (528)
T ss_pred cccccccchHhhc-ChHHHHHHHHHHHHHHhhHHH-HHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHH
Confidence 001 12344555 366666555433332222222 2221111122222211 012233466
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccc
Q 020863 137 LSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGP 216 (320)
Q Consensus 137 ~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (320)
..++.....++|.++.++++||+|||+.+..+.+.+.++.+++... .... ....++ +..-.+..+...
T Consensus 386 dllitslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c--~~rn-------~~tvll---f~arafisg~fq 453 (528)
T KOG0253|consen 386 DLLITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTC--KTRN-------AYTVLL---FTARAFISGAFQ 453 (528)
T ss_pred HHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHh--cCcc-------hhHHHH---HHHHHHHhchhe
Confidence 7777788899999999999999999998877666655555443322 1111 111111 122334456667
Q ss_pred cchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhcccCCCCCH
Q 020863 217 VPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPETQGLTF 292 (320)
Q Consensus 217 ~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~g~~~ 292 (320)
+.|+|.+|.|||.+|+++.|.+...+++++++.+.+. +........+..++.++++++++.+.++.-|||||++
T Consensus 454 vaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 454 VAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred EEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 8899999999999999999999999999999988766 3333334567778888888888888777789999975
No 6
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.95 E-value=1.4e-25 Score=206.04 Aligned_cols=279 Identities=32% Similarity=0.578 Sum_probs=187.7
Q ss_pred CchHHHHhhhhHHHHHHHHHhhcCCCChHHHHhcCCHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHhccccchhhhc
Q 020863 9 GTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVF 88 (320)
Q Consensus 9 ~~WR~~f~i~~~~~l~~~~~~~~lpESp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 88 (320)
.+||++|++.+++.++.++.+.++||||+|+..+++.+++.+..++.++.+..+...++..+...++ ..+ ....+
T Consensus 191 ~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~ 265 (479)
T PRK10077 191 DGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQALQEIKHSLDHG--RKT---GGKLL 265 (479)
T ss_pred CChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHHHHHHHHHHHHh--hhh---hhhhc
Confidence 4799999999999988877788899999999888998888888777665443322222221111100 000 01111
Q ss_pred cchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHH
Q 020863 89 KSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSS 168 (320)
Q Consensus 89 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~ 168 (320)
. ........++....+.++.+++...++.|.+.+..|.+.... .....+..+..+++.+++++++||+|||+++..+
T Consensus 266 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~-~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~ 342 (479)
T PRK10077 266 M--FGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGASTDIA-LLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIG 342 (479)
T ss_pred c--hhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCCchH-HHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHh
Confidence 1 111122222333455556667777788899988888765443 3444555666789999999999999999988877
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHH
Q 020863 169 LAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLI 248 (320)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~ 248 (320)
.....++.+.+..... ... . ......+..++...+..+..+..+.+.+|++|++.|+++.|+....+++++++
T Consensus 343 ~~~~~v~~~~l~~~~~-~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~ 415 (479)
T PRK10077 343 ALGMAIGMFSLGTAFY-TQA---P---GIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYF 415 (479)
T ss_pred HHHHHHHHHHHHHHHh-cCc---c---cHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHH
Confidence 7666655544432221 111 0 11222233333444444556777899999999999999999999999999999
Q ss_pred HHHHHHHHH------HHhcchhHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHhcc
Q 020863 249 VAQTFLTVA------ELVGTGATFLILAGIAVLAVVFVILFVPETQGLTFLEVEQMWKER 302 (320)
Q Consensus 249 ~~~~~~~~~------~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~g~~~~~~~~~~~~~ 302 (320)
++.+++.+. +..++...|.+++.+++++.++.+++.||||++++||+++.++..
T Consensus 416 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 475 (479)
T PRK10077 416 VSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEEMEALWEPE 475 (479)
T ss_pred HHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHHHhhc
Confidence 988877554 245556677777777777777777789999999999999888653
No 7
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.95 E-value=6.3e-26 Score=213.89 Aligned_cols=268 Identities=21% Similarity=0.307 Sum_probs=170.6
Q ss_pred CchHHHHhhhhHHHHHHHHHhhcCCCChHHHHhcCCHHHHHHHHHHhcChhhhH-----HH--HHHHHHHHHHH-H---H
Q 020863 9 GTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLE-----DE--IDHLSAAAEEE-L---R 77 (320)
Q Consensus 9 ~~WR~~f~i~~~~~l~~~~~~~~lpESp~~l~~~~~~~~a~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~-~---~ 77 (320)
.+||++|++.++++++.++.++++||||||+..+|+.+||.++++++++.|... +. .+++....+++ . +
T Consensus 331 ~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (742)
T TIGR01299 331 HSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIE 410 (742)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhccc
Confidence 479999999999999988888999999999999999999999999998765321 10 01111100000 0 0
Q ss_pred hcc-c-----------------cchhhhccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHHh-------------
Q 020863 78 KKK-T-----------------VRYLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMA------------- 126 (320)
Q Consensus 78 ~~~-~-----------------~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------------- 126 (320)
.+. + ..+.++|+.+. ++..+....++.. ..++++.+..|.|.+++..
T Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~-~~~tl~l~~~wf~-~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~ 488 (742)
T TIGR01299 411 SDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEV-REITIKLMGVWFT-LSFGYYGLSVWFPDMIKHLQADDYAALTKNFP 488 (742)
T ss_pred ccccchhhcchhhhhhhhhhHHHHHHHHcCccH-HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 000 0 02455665544 4444443333333 3446777777888765431
Q ss_pred -----------------------------CCC---------------------C--------------------------
Q 020863 127 -----------------------------GFQ---------------------S-------------------------- 130 (320)
Q Consensus 127 -----------------------------g~~---------------------~-------------------------- 130 (320)
|+. +
T Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~ 568 (742)
T TIGR01299 489 GDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFID 568 (742)
T ss_pred ccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhh
Confidence 000 0
Q ss_pred -------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHh
Q 020863 131 -------------------------NQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIS 185 (320)
Q Consensus 131 -------------------------~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~ 185 (320)
....+....+..+..+++.+++|+++||+|||+++..+.++.+++.+.+... .
T Consensus 569 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~--~ 646 (742)
T TIGR01299 569 SEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFG--N 646 (742)
T ss_pred hhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH--c
Confidence 0011233445556678999999999999999999887766666555443321 1
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhH
Q 020863 186 GSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGAT 265 (320)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 265 (320)
+ .. . .++...+ ..++..+..+..+++.+|++|++.|+++.|+.+..+++++++++.+...+... +...+
T Consensus 647 --s-----~~-~-ll~~~~l-~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~p 715 (742)
T TIGR01299 647 --S-----ES-A-MIALLCL-FGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAP 715 (742)
T ss_pred --c-----HH-H-HHHHHHH-HHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHH
Confidence 0 00 1 1111112 22223334556778999999999999999999999999999999887766553 33456
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCH
Q 020863 266 FLILAGIAVLAVVFVILFVPETQGLTF 292 (320)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~pet~g~~~ 292 (320)
|++++++.++++++. .++|||+|+.+
T Consensus 716 f~i~a~~lll~~ll~-~~LPET~~~~l 741 (742)
T TIGR01299 716 ILFASAALACGGLLA-LKLPDTRGQVL 741 (742)
T ss_pred HHHHHHHHHHHHHHH-HhCCCCccccc
Confidence 666666666665544 56799998864
No 8
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.92 E-value=2.5e-25 Score=191.67 Aligned_cols=274 Identities=22% Similarity=0.363 Sum_probs=176.5
Q ss_pred CchHHHHhhhhHHHHHHHHHhhcCCCChHHHHh-cCCHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHhcc-cc---c
Q 020863 9 GTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFM-KSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKK-TV---R 83 (320)
Q Consensus 9 ~~WR~~f~i~~~~~l~~~~~~~~lpESp~~l~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~ 83 (320)
.-||..|.++++|++..++.|+.||||+||-.. .++.++|.+-.++.... + +.++.+.+...+. +. .
T Consensus 222 ~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~-----~---~~~~~~~~~~~~~~~~~~~~ 293 (538)
T KOG0252|consen 222 GVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSV-----D---IEAESTAESDVPPPSNSFGL 293 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhcccccccc-----c---cchhhccccCCCCcccccch
Confidence 359999999999999999999999999999643 23344443221111111 0 1111111100000 11 1
Q ss_pred hhhhccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHHhCCCCcHHHH--------HHHHHHHHHHHHHHHHHHHH
Q 020863 84 YLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLAL--------LLSLAVAGTNAVGTIVGIYL 155 (320)
Q Consensus 84 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~~~~~~~~~~~l~~g~l 155 (320)
+.+.|..++- +.++ +.....+..=...+..+.+...+++..|..+..... ...++.....++|..+..++
T Consensus 294 F~~~f~~~hg-~~Ll-gt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~ 371 (538)
T KOG0252|consen 294 FSRLFLRWHG-KHLL-GTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYF 371 (538)
T ss_pred HHHHHHHHHH-HHHH-HHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEE
Confidence 2233332311 2222 222222222223455556677788877766543322 22233333334566777889
Q ss_pred HhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhH
Q 020863 156 IDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICG 235 (320)
Q Consensus 156 ~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~ 235 (320)
+|++|||.+.+.++.++.+....+...+.+ .... .. .+++..+...+...|++....++++|.||+++|+++.
T Consensus 372 id~iGRk~iq~~GF~~~~i~~~~~~~~y~~--~~~~---~G--f~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~h 444 (538)
T KOG0252|consen 372 IDIIGRKYIQLMGFFIMTIFFFVIAGPYNQ--LENT---IG--FVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCH 444 (538)
T ss_pred eehhhhHHHHHhhHHHHHHHHHHHcCCccc--cccc---Cc--eeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhh
Confidence 999999999988877665555444433321 1111 11 2334445566778899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-----HhcchhHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHh
Q 020863 236 GMSATVNWISNLIVAQTFLTVAE-----LVGTGATFLILAGIAVLAVVFVILFVPETQGLTFLEVEQMWK 300 (320)
Q Consensus 236 gi~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~pet~g~~~~~~~~~~~ 300 (320)
|++.+.|.+|++++...+.++.+ ..+...++++++++++++.++ .+++|||||+++||++.+.+
T Consensus 445 GIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~-T~l~pEtk~~~leei~~e~~ 513 (538)
T KOG0252|consen 445 GISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILF-TLLIPETKGKSLEEISNEEE 513 (538)
T ss_pred hHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHhe-eEEeecccccCHHHhcChhh
Confidence 99999999999999999999888 677888999999999988765 46788999999999966554
No 9
>TIGR00898 2A0119 cation transport protein.
Probab=99.91 E-value=2.3e-23 Score=192.68 Aligned_cols=262 Identities=24% Similarity=0.359 Sum_probs=163.0
Q ss_pred chHHHHhhhhHHHHHHHHHhhcCCCChHHHHhcCCHHHHHHHHHHhcChhhhH--HHHHHHHHHHHHHHHhccccchhhh
Q 020863 10 TWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLE--DEIDHLSAAAEEELRKKKTVRYLDV 87 (320)
Q Consensus 10 ~WR~~f~i~~~~~l~~~~~~~~lpESp~~l~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l 87 (320)
+||+.|++.+++.++..+..+++||||+|+..+++.+|+.+.+++..+.+..+ ++..+...+. ++.+.+++.+.+++
T Consensus 241 ~wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l 319 (505)
T TIGR00898 241 DWRWLQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEK-DLSSSKKQYSFLDL 319 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhh-hhhhccCCCcHHHH
Confidence 49999999999999888788899999999999999999999888776544321 1111111011 11111122467788
Q ss_pred ccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHH
Q 020863 88 FKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALS 167 (320)
Q Consensus 88 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~ 167 (320)
+++++.+...+.....+..... .++. .+......+.+. ........+..+++.+++++++||+|||+.+..
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~ 390 (505)
T TIGR00898 320 FRTPNLRKTTLCLMMLWFTTAF-SYYG----LVLDLGNLGGNI----YLDLFISGLVELPAKLITLLLIDRLGRRYTMAA 390 (505)
T ss_pred hCChHHHHHHHHHHHHHHHHHH-HHHH----HhccccccCCCh----HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 9888887765554332222111 1111 122223333331 233344455677889999999999999998877
Q ss_pred HhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHH
Q 020863 168 SLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNL 247 (320)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~ 247 (320)
+....+++.+.+... . .. . .+...... +...++..+..+..+.+.+|++|++.|+++.|+.+..++++++
T Consensus 391 ~~~~~~~~~l~~~~~--~--~~---~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~ 460 (505)
T TIGR00898 391 SLLLAGVALLLLLFV--P--VD---L--YFLRTALA-VLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSI 460 (505)
T ss_pred HHHHHHHHHHHHHHc--C--CC---c--hHHHHHHH-HHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHH
Confidence 665555544433221 1 10 0 01111111 1111222223455678899999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhcccCCCCCHHH
Q 020863 248 IVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPETQGLTFLE 294 (320)
Q Consensus 248 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~g~~~~~ 294 (320)
+++.+.. +.+ .+...++.+++++.+++++. .+++|||++++++|
T Consensus 461 i~p~i~~-~~~-~~~~~~~~~~~~~~~~~~~~-~~~lpet~~~~l~~ 504 (505)
T TIGR00898 461 ISPFLVY-LGE-KWLFLPLVLFGGLALLAGIL-TLFLPETKGVPLPE 504 (505)
T ss_pred HHhHHHH-HHH-HHHhhHHHHHHHHHHHHHHH-HHcCcCCCCCCCCC
Confidence 9888776 333 34455677777666666554 46789999998765
No 10
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.90 E-value=2.8e-21 Score=176.88 Aligned_cols=284 Identities=39% Similarity=0.651 Sum_probs=181.1
Q ss_pred CCchHHHHhhhhHHHHHHHHHhhcCCCChHHHHhcCCHHHHHHHHHHhcChhhhHHHH----HHHHHHHHHHHHhccccc
Q 020863 8 PGTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEI----DHLSAAAEEELRKKKTVR 83 (320)
Q Consensus 8 ~~~WR~~f~i~~~~~l~~~~~~~~lpESp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 83 (320)
..+||+.|++.++..++.++...++||+|+++..+++.+++.+..++..+.+..+.+. +......+.+.+..+ ..
T Consensus 192 ~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 270 (481)
T TIGR00879 192 TLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQ-PS 270 (481)
T ss_pred CccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhcc-cc
Confidence 3579999999888888777778889999999888877777666655543322111111 110111111111111 11
Q ss_pred hhhhccchh-hHHHHHHHHHHHHHHhhcCcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcch
Q 020863 84 YLDVFKSKE-IRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRK 162 (320)
Q Consensus 84 ~~~l~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR 162 (320)
+.+.++..+ .+...+....+..+.+..+.+...++.|.+.++.|.+... ......+..+..+++.+++++++||+|||
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 349 (481)
T TIGR00879 271 WGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDH-AFLVSIIVGAVNFAFTFVAIFLVDRFGRR 349 (481)
T ss_pred HHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchH-HHHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 223332211 1222222333334444455666677889898888887643 44455555666789999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHH
Q 020863 163 KLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVN 242 (320)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~ 242 (320)
+.+..+.....++...+.......... .+.......+....++...+..+..+..+.+.+|.+|++.|+++.|+.+...
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 428 (481)
T TIGR00879 350 PLLLIGAAGMAICLFVLGILGASFVTG-SSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAAN 428 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCC-cccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHH
Confidence 987766555444444433211111110 0000012223333344455566667777888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhcccCCCCCHHH
Q 020863 243 WISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPETQGLTFLE 294 (320)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~g~~~~~ 294 (320)
++++++++.+.+.+.+..++...|.+++++++++.++.+++.||+|+++++|
T Consensus 429 ~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 480 (481)
T TIGR00879 429 WLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETKGRTLEE 480 (481)
T ss_pred HHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccCCCCChhh
Confidence 9999999998888888778878888888888888777778889999887764
No 11
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.87 E-value=8.8e-20 Score=169.36 Aligned_cols=272 Identities=20% Similarity=0.261 Sum_probs=169.5
Q ss_pred chHHHHhhhhHHHHHHHHHhhcCCCChHHHHhcCCHHHHHHHHHHhcChhh----hHHHHHHHHHHHH-HHHHhccccch
Q 020863 10 TWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIAR----LEDEIDHLSAAAE-EELRKKKTVRY 84 (320)
Q Consensus 10 ~WR~~f~i~~~~~l~~~~~~~~lpESp~~l~~~~~~~~a~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~ 84 (320)
+||+.+++..+++++.+++++..||||||+..+|+.+++.+.+++..+.|+ .....+......+ +....+++..+
T Consensus 232 ~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (521)
T KOG0255|consen 232 DWRWLFWIISIPSGLFLLLWFLPPESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISF 311 (521)
T ss_pred hHHHHHHHHHHHHHHHHHHHHccCcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCch
Confidence 799999999999999888877788999999999999999999999876541 1111111111111 11111223457
Q ss_pred hhhccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHH
Q 020863 85 LDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKL 164 (320)
Q Consensus 85 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~ 164 (320)
.++++.++.++..+.......... .+++ -.+......|.+. ............++....+...|++|||..
T Consensus 312 ~~l~~~~~l~~~~~~~~~~~~~~~-~~y~----gl~~~~~~lg~~~----~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~ 382 (521)
T KOG0255|consen 312 LDLFRTPRLRYRTLYLLFIWFVFS-LVYY----GLSLNVSGLGGNI----YLNFTLSGLVELPAYFRNGLLLPEFGRRPP 382 (521)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHh-HHHH----hhhhhhhhcCchH----HHHHHHHHHHHhhHHHHHHHHHHHhCcHHH
Confidence 888998877776665443321111 1111 1222233334331 222333333567777888999999999998
Q ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHH
Q 020863 165 ALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWI 244 (320)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~ 244 (320)
...+.....++.+...+...... . ++..+...+...+...+. ...+.+.+|++||.+|+.+.|.++..+++
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~-----~---~~~~~~~~~~~~~~~~~~-~~~~~~~~el~pt~~r~~~~~~~~~~~~~ 453 (521)
T KOG0255|consen 383 LFLSLFLAGIGLLLFGWLPDDLG-----G---WLHWILPLLGKFFIGSAF-NLIFLYSAELIPTVVRNTAVGAISAAARL 453 (521)
T ss_pred HHHHHHHHHHHHHHHHHhhccch-----h---HHHHHHHHHHHHHHHHHH-HHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 88777766666655544321110 0 111111111111122222 23478999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHh
Q 020863 245 SNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPETQGLTFLEVEQMWK 300 (320)
Q Consensus 245 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~g~~~~~~~~~~~ 300 (320)
++++++.+...... ......+..++....+.++++..++|||+++.+.|..++.+
T Consensus 454 ~~i~ap~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l~~t~~~~~ 508 (521)
T KOG0255|consen 454 GSILAPLFPLLLRQ-MFPLLGLILFGWLALLLGLLSLLLLPETKGKPLPGTLLDAE 508 (521)
T ss_pred HHHHHHHHHHHHhh-hcccchHHHHHHHHHHHHHHHHhcCcccCCCCCchhHHHHH
Confidence 99988887655444 22223333356666666666778999999999877555554
No 12
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.86 E-value=5.9e-20 Score=169.13 Aligned_cols=248 Identities=15% Similarity=0.132 Sum_probs=136.0
Q ss_pred CCchHHHHhhhhHHHHHHHHHhhcCCCChHHHHhcCCHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHhccccchhhh
Q 020863 8 PGTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDV 87 (320)
Q Consensus 8 ~~~WR~~f~i~~~~~l~~~~~~~~lpESp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (320)
..+||++|+++++++++.++++.++||||+|...+++.+++.+ +...+++..+++++
T Consensus 188 ~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~ 244 (490)
T PRK10642 188 DWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDR-----------------------EGLQDGPKVSFKEI 244 (490)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhcc-----------------------ccccccccCCHHHH
Confidence 3579999999998888878788899999998643322111000 00000112234455
Q ss_pred ccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHH-HhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHH
Q 020863 88 FKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLAL 166 (320)
Q Consensus 88 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~ 166 (320)
++++ ++..........+. ...++....|.|.+++ ..|.+... .........+...++.+++|+++||+|||+.+.
T Consensus 245 ~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~p~~l~~~~g~s~~~-~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~ 320 (490)
T PRK10642 245 ATKH--WRSLLTCIGLVIAT-NVTYYMLLTYMPSYLSHNLHYSEDH-GVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVI 320 (490)
T ss_pred HHHh--HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 5431 22222222111111 2233444556777775 45765443 333334444556788889999999999999776
Q ss_pred HHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHH
Q 020863 167 SSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISN 246 (320)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~ 246 (320)
.+.....+....+... .... . . .....+..+.......+ .+....+.+|++|++.|+++.|+.+..++.++
T Consensus 321 ~~~~~~~~~~~~~~~~-~~~~-----~-~-~~~~~~~~~~g~~~~~~-~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g 391 (490)
T PRK10642 321 LGSVALFVLAIPAFIL-INSN-----V-I-GLIFAGLLMLAVILNCF-TGVMASTLPAMFPTHIRYSALAAAFNISVLVA 391 (490)
T ss_pred HHHHHHHHHHHHHHHH-HhCC-----C-H-HHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCCccchHHHHHHHHHHHHHH
Confidence 5543322222221111 1111 0 0 11111111111111112 22334677899999999999998877788887
Q ss_pred HHHHHHHHHHHHHhc-chhHHHHHHHHHHHHHHHHHhhcccCCCCCH
Q 020863 247 LIVAQTFLTVAELVG-TGATFLILAGIAVLAVVFVILFVPETQGLTF 292 (320)
Q Consensus 247 ~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~pet~g~~~ 292 (320)
.+++.+...+.+..+ +..+++......+++.+ ..+++|||+++.+
T Consensus 392 ~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~-~~~~~pes~~~~~ 437 (490)
T PRK10642 392 GLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLI-TGVTMKETANRPL 437 (490)
T ss_pred HHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHH-HHHHhccccCCCC
Confidence 788877776666544 34444444444444444 3456799987654
No 13
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.79 E-value=1.8e-17 Score=150.43 Aligned_cols=233 Identities=19% Similarity=0.177 Sum_probs=123.0
Q ss_pred CCchHHHHhhhhHHHHHHHHHhhcCCCChHHHHhcCCHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHhccccchhhh
Q 020863 8 PGTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDV 87 (320)
Q Consensus 8 ~~~WR~~f~i~~~~~l~~~~~~~~lpESp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (320)
..+||++|+++++++++.++++..+||||++.. +. . + +..+++++
T Consensus 194 ~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~------~~-------------------------~--~--~~~~~~~l 238 (432)
T PRK10406 194 EWGWRIPFALGAVLAVVALWLRRQLDETSQQET------RA-------------------------L--K--EAGSLKGL 238 (432)
T ss_pred ccchHHHHHHHHHHHHHHHHHHhcCCCCchHHH------hh-------------------------h--c--ccccHHHH
Confidence 458999999999999988888888999987521 00 0 0 01134556
Q ss_pred ccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHH-HhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHH
Q 020863 88 FKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLAL 166 (320)
Q Consensus 88 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~ 166 (320)
+++++.+...+.. ....+ ..++....|.|.+++ ..|.+..+......+. .....++.++.|+++||+|||+...
T Consensus 239 ~~~~~~~~~~~~~---~~~~~-~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~-~~~~~i~~~~~G~l~Dr~grr~~~~ 313 (432)
T PRK10406 239 WRNRRAFIMVLGF---TAAGS-LCFYTFTTYMQKYLVNTAGMHANVASGIMTAA-LFVFMLIQPLIGALSDKIGRRTSML 313 (432)
T ss_pred HhhHHHHHHHHHH---HHHHH-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHcCchHHHH
Confidence 6655443322211 11111 122333445676664 4677654443433333 3335677788899999999998765
Q ss_pred HHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHH-
Q 020863 167 SSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWIS- 245 (320)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~- 245 (320)
.......+...++.... .... .......+.....+...+ ..+..+.+.+|+||++.|+++.|+++..++..
T Consensus 314 ~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~---~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~ 385 (432)
T PRK10406 314 CFGSLAALFTVPILSAL-QNVS----SPYAAFGLVMCALLIVSF---YTSISGILKAEMFPAQVRALGVGLSYAVANALF 385 (432)
T ss_pred HHHHHHHHHHHHHHHHH-HcCC----cHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHCCCCccchhhhHHHHHHHHHH
Confidence 54333222222111111 1110 111111111111111111 12345678899999999999999999887753
Q ss_pred HHHHHHHHHHHHHHhc-chhHHHHHHHHHHHHHHHHHhhcccCCCCC
Q 020863 246 NLIVAQTFLTVAELVG-TGATFLILAGIAVLAVVFVILFVPETQGLT 291 (320)
Q Consensus 246 ~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~pet~g~~ 291 (320)
+...+.+.. +.+..| +...+++.+++.+++.+..+ + .+++||+
T Consensus 386 g~~~p~~~~-~l~~~g~~~~~~~~~~~~~~i~~~~~~-~-l~~~~~~ 429 (432)
T PRK10406 386 GGSAEYVAL-SLKSIGMETAFFWYVTLMAVVAFLVSL-M-LHRKGKG 429 (432)
T ss_pred HhHHHHHHH-HHHHhCCCcHHHHHHHHHHHHHHHHHH-H-hhhcccc
Confidence 333444333 334445 33344444455555544333 3 4556665
No 14
>PRK09952 shikimate transporter; Provisional
Probab=99.78 E-value=3.2e-17 Score=148.90 Aligned_cols=237 Identities=17% Similarity=0.182 Sum_probs=128.5
Q ss_pred CCchHHHHhhhhHHHHHHHHHhhcCCCChHHHHhcCCHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHhccccch-hh
Q 020863 8 PGTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRY-LD 86 (320)
Q Consensus 8 ~~~WR~~f~i~~~~~l~~~~~~~~lpESp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 86 (320)
..+||++|++++++.++.++++..+||||+|...+++.+++ +++.+. ..
T Consensus 195 ~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~~~------------------------------~~~~~~~~~ 244 (438)
T PRK09952 195 SWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQAAA------------------------------KKRIPVIEA 244 (438)
T ss_pred ccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhcccc------------------------------cccCCHHHH
Confidence 35899999999999888777788899999885332111100 000011 12
Q ss_pred hccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHH-HHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHH
Q 020863 87 VFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIV-QMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLA 165 (320)
Q Consensus 87 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~ 165 (320)
++++++.+....... ... ..+.+....+.|.++ +..|.+.... ...........+++.++.|+++||+|||+..
T Consensus 245 l~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~y~~~~~g~s~~~~-~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~ 319 (438)
T PRK09952 245 LLRHPGAFLKIIALR---LCE-LLTMYIVTAFALNYSTQNLGLPRELF-LNIGLLVGGLSCLTIPCFAWLADRFGRRRVY 319 (438)
T ss_pred HHHchHHHHHHHHHH---HHH-HHHHHHHHHHHHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCchHHH
Confidence 334444333222111 111 112222333455554 4556654332 2223333445677888999999999999987
Q ss_pred HHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHH-H
Q 020863 166 LSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNW-I 244 (320)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~-~ 244 (320)
..+.....++...+.... ... +. .+..+....+.... .....+..+++.+|.+|++.|+++.|+.+..++ +
T Consensus 320 ~~~~~~~~~~~~~~~~~~-~~~----~~--~~~~~~~~~l~~~~-~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~l 391 (438)
T PRK09952 320 ITGALIGTLSAFPFFMAL-EAQ----SI--FWIVFFSIMLANIA-HDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVV 391 (438)
T ss_pred HHHHHHHHHHHHHHHHHH-HcC----Ch--HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHH
Confidence 655443333322222111 111 01 11111111111111 111234456888999999999999999877765 6
Q ss_pred HHHHHHHHHHHHHHHhc--chhHHHHHHHHHHHHHHHHHhhcccCC
Q 020863 245 SNLIVAQTFLTVAELVG--TGATFLILAGIAVLAVVFVILFVPETQ 288 (320)
Q Consensus 245 ~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~pet~ 288 (320)
++.+++.+...+.+..+ +..++...+.+.+++.+.. +.++||.
T Consensus 392 gg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~-~~~~~~~ 436 (438)
T PRK09952 392 GGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTA-LLMKDNQ 436 (438)
T ss_pred HHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHH-HHccccc
Confidence 77788888777766442 4455555555555555543 4566653
No 15
>PRK15075 citrate-proton symporter; Provisional
Probab=99.68 E-value=6.6e-15 Score=133.68 Aligned_cols=174 Identities=14% Similarity=0.185 Sum_probs=97.1
Q ss_pred CcceeeeehHHHHHH-hCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 020863 111 GINTVMYYSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSA 189 (320)
Q Consensus 111 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (320)
+++....|.|.++++ .|.+..+. .....+..+..+++.+++|+++||+|||+....+.....+...+.. ..... ..
T Consensus 253 ~~~~~~~~~p~~l~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~-~~~~~-~~ 329 (434)
T PRK15075 253 SFYLITVYTPTFGKTVLHLSAADS-LLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPAL-SWLVA-AP 329 (434)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH-HHHHc-CC
Confidence 344556677887775 67765443 3444455566788999999999999999987654332222111111 11111 11
Q ss_pred CCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHH-HHHHHHHHHHHHHHHhcchh--H-
Q 020863 190 SSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWI-SNLIVAQTFLTVAELVGTGA--T- 265 (320)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~-~~~~~~~~~~~~~~~~g~~~--~- 265 (320)
. ....... ..+....++ ...+..+.+.+|.+|++.|+++.|+....++. ++.+++.....+.+..|+.. .
T Consensus 330 ---~-~~~~~~~-~~~~~~~~g-~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~~~~~~ 403 (434)
T PRK15075 330 ---S-FARMLAV-ELWLSFLYG-SYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDKAAPGY 403 (434)
T ss_pred ---c-hHHHHHH-HHHHHHHHH-HHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCchHHHH
Confidence 1 1111111 111111111 12333456789999999999999987666665 46677777777777776432 2
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCHHHHH
Q 020863 266 FLILAGIAVLAVVFVILFVPETQGLTFLEVE 296 (320)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~pet~g~~~~~~~ 296 (320)
+.+++.+ ..++..+...+-++.+++..|
T Consensus 404 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 431 (434)
T PRK15075 404 WLSFAAV---CGLIATLVLYRRRGARLQAAE 431 (434)
T ss_pred HHHHHHH---HHHHHHHHhccccchhhhhhh
Confidence 2222222 222334566677777777554
No 16
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.67 E-value=4.4e-15 Score=131.54 Aligned_cols=216 Identities=11% Similarity=0.076 Sum_probs=122.3
Q ss_pred CchHHHHhhhhHHHHHH-HHHhhcCCCChHHHHhcCCHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHhccccchhhh
Q 020863 9 GTWRWMLGVSAVPAIIQ-FVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDV 87 (320)
Q Consensus 9 ~~WR~~f~i~~~~~l~~-~~~~~~lpESp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (320)
.+||+.|.+.++++++. ++.+.++||+|++. ++..+. + +.. .+++++
T Consensus 141 ~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~---~~~~~~-------------~-----------~~~-----~~~~~l 188 (368)
T TIGR00903 141 GGLQLLIIPIAAVAAAGIILVLAALPALPFQA---AEGFGF-------------K-----------DAV-----KEFGAL 188 (368)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHcCCCCCCC---CCCcch-------------H-----------HHH-----HHHHHH
Confidence 47999999977777654 44566899999863 110000 0 000 023467
Q ss_pred ccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchH---H
Q 020863 88 FKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKK---L 164 (320)
Q Consensus 88 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~---~ 164 (320)
++++..+...+.... ....++.+..|.|+++++.+++. .......++ ...+.+..++++||.+||+ .
T Consensus 189 l~~~~~~~~~~~~~~-----~~~~~~~~~~wlp~~L~~~g~s~-~~~~~~~l~----~~~g~~g~~~~~d~~~r~~~r~~ 258 (368)
T TIGR00903 189 AGRKDLWIIGAILGF-----GVALFDNLAIWLEAALRPAGLED-IAGDAVALA----ILAGLIGVAVIPDRVARAGLRSI 258 (368)
T ss_pred HcChhHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHCCCCh-HHHHHHHHH----HHHHHHHHHHhhHHhhhhhhHHH
Confidence 777776655443221 12233344567888888877653 222222222 3344455688999887643 2
Q ss_pred HHH-HhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHH
Q 020863 165 ALS-SLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNW 243 (320)
Q Consensus 165 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~ 243 (320)
... ......+. ..... ...+ . ...+....+ ..++..+..+..+.+.+|.+|++.|+++.|+.+..++
T Consensus 259 ~~~~~~~~~a~~--~~~~~--~~~~----~---~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~ 326 (368)
T TIGR00903 259 YIRAAALLIAAF--FLALA--FELN----R---LALFAFIGI-AGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSR 326 (368)
T ss_pred HHHHHHHHHHHH--HHHHH--Hccc----c---HHHHHHHHH-HHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHH
Confidence 221 11111111 11111 1111 1 111212211 2222333344567889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHH
Q 020863 244 ISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFV 280 (320)
Q Consensus 244 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 280 (320)
++++.++...+.+.. +....|.+++...+++.+.+
T Consensus 327 ~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~ 361 (368)
T TIGR00903 327 AISVALALAAMLFIS--SAEAYFTFLAILITIAFAIA 361 (368)
T ss_pred HHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHH
Confidence 999888887766553 55567777777777766654
No 17
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.66 E-value=6.6e-15 Score=133.33 Aligned_cols=219 Identities=20% Similarity=0.224 Sum_probs=123.6
Q ss_pred CchHHHHhhhhHHHHHHHHHhhcCCCChHHHHhcCCHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHhccccchhhhc
Q 020863 9 GTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVF 88 (320)
Q Consensus 9 ~~WR~~f~i~~~~~l~~~~~~~~lpESp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 88 (320)
.+||+.|++.+++.++.++++...||++++...+.+.++ +.+ +........+.++++
T Consensus 169 ~~w~~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~---------~~~--------------~~~~~~~~~~~~~~~ 225 (426)
T PRK12307 169 YGWRAAFFVGLLPVLLVIYIRARAPESKEWEEAKLSGKG---------KHS--------------QSAWSVFSLSMKGLF 225 (426)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCChHHHHhhhhccc---------ccc--------------ccchhhhhHHHHHHH
Confidence 479999999877777666666678998876422110000 000 000000011345566
Q ss_pred cchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHH
Q 020863 89 KSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSS 168 (320)
Q Consensus 89 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~ 168 (320)
+++..+......... +..+.....+..+.|.+++..|.+....... .....+++.++.++.++++||+|||+....+
T Consensus 226 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~ 302 (426)
T PRK12307 226 NRAQFPLTLCVFIVL--FSIFGANWPIFGLLPTYLAGEGFDTGVVSNL-MTAAAFGTVLGNIVWGLCADRIGLKKTFSIG 302 (426)
T ss_pred hhchHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 666655433322111 1111122223345677777777765444333 3344555788999999999999999987665
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHH-HHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHH
Q 020863 169 LAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYI-AFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNL 247 (320)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~ 247 (320)
.....+....+. .. ... . . . ......+. .+...+..+....+..|.+|++.|+++.|+....+++++.
T Consensus 303 ~~~~~~~~~~~~--~~-~~~----~-~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~ 371 (426)
T PRK12307 303 LLMSFLFIFPLF--RI-PQD----N-Y--L-LLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGT 371 (426)
T ss_pred HHHHHHHHHHHH--HH-ccc----c-H--H-HHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHH
Confidence 544333322221 11 110 1 1 1 11111111 1122233344556778999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcchh
Q 020863 248 IVAQTFLTVAELVGTGA 264 (320)
Q Consensus 248 ~~~~~~~~~~~~~g~~~ 264 (320)
+++.+...+.+..|...
T Consensus 372 ~gp~~~g~l~~~~g~~~ 388 (426)
T PRK12307 372 FNSMAATWLGITMGLGA 388 (426)
T ss_pred HHHHHHHHHHHcccHHH
Confidence 99888888877776443
No 18
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.65 E-value=4.6e-15 Score=134.67 Aligned_cols=165 Identities=15% Similarity=0.169 Sum_probs=98.7
Q ss_pred eeeehHHHH-HHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhh--cchHHH-HHHhHHHHHHHHHHHHHHHhcCCCC
Q 020863 115 VMYYSPTIV-QMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHF--GRKKLA-LSSLAGVIISLVLLSWAFISGSSAS 190 (320)
Q Consensus 115 ~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~--grR~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (320)
+..+.|.++ +..|.+..+.... .....+.+.++.+++|+++||+ ++|+.. ........+....+ .. .. .
T Consensus 262 ~~~~~p~~l~~~~g~s~~~a~~~-~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~-~~--~~-~-- 334 (434)
T PRK11663 262 INDWGNLYMSETLGVDLVTANSA-VSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSL-WL--MP-F-- 334 (434)
T ss_pred HHHHHHHHHHhccCCCHHHHHHH-HHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHH-HH--cc-c--
Confidence 344667666 4567765554433 3344555789999999999998 333332 21111111111111 11 11 1
Q ss_pred CCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Q 020863 191 SSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILA 270 (320)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 270 (320)
.+. .. ..... +...++..++......+.+|.+|++.|+++.|+.+..+++++.+++.....+.+..|+...|...+
T Consensus 335 ~~~--~~-~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~ 410 (434)
T PRK11663 335 ASY--VM-QAACF-FTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVIS 410 (434)
T ss_pred ccH--HH-HHHHH-HHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHH
Confidence 011 11 11111 111122222222334566899999999999999999999999999999999888888888888888
Q ss_pred HHHHHHHHHHHhhcccCCCC
Q 020863 271 GIAVLAVVFVILFVPETQGL 290 (320)
Q Consensus 271 ~~~~~~~~~~~~~~pet~g~ 290 (320)
++.+++++..+...++.+++
T Consensus 411 ~~~~~~~~~~~~~~~~~~~~ 430 (434)
T PRK11663 411 IAAGISALLLLPFLNAQAPR 430 (434)
T ss_pred HHHHHHHHHHHHHHhhhchh
Confidence 88777766555555555544
No 19
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.64 E-value=2.4e-14 Score=130.76 Aligned_cols=249 Identities=15% Similarity=0.217 Sum_probs=127.3
Q ss_pred CchHHHHhhhhHHHHHH-HHHhhcCCCChHHHHhcCCHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHhccccc-hhh
Q 020863 9 GTWRWMLGVSAVPAIIQ-FVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVR-YLD 86 (320)
Q Consensus 9 ~~WR~~f~i~~~~~l~~-~~~~~~lpESp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 86 (320)
.+||+.|++.+++.++. ++...++||+|+....+. ++|..+ +.+ ++. +.+++.+.+.+.. ...
T Consensus 184 ~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~------~~~---~~~-----~~~~~~~~~~~~~~~~~ 248 (452)
T PRK11273 184 NDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPP-IEEYKN------DYP---DDY-----NEKHEQELTAKQIFMQY 248 (452)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCC-hhhhhh------ccc---ccc-----ccccCCCccHHHHHHHH
Confidence 47999999988877765 444567899886521111 111000 000 000 0000000000000 112
Q ss_pred hccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHH-hCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhh--cchH
Q 020863 87 VFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHF--GRKK 163 (320)
Q Consensus 87 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~--grR~ 163 (320)
+++++..|...+...... ...+....|.|.++++ .|++....+. .........+++.+++|+++||+ +||.
T Consensus 249 ~~~~~~~~~~~l~~~~~~-----~~~~~~~~~~P~~l~~~~g~s~~~~~~-~~~~~~~~~~~g~~~~G~l~dr~~~~r~~ 322 (452)
T PRK11273 249 VLPNKLLWYIAIANVFVY-----LLRYGILDWSPTYLKEVKHFALDKSSW-AYFLYEYAGIPGTLLCGWMSDKVFRGNRG 322 (452)
T ss_pred HHcChHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHccCCcc
Confidence 455666555433322111 1122334567777765 5666544333 33445555778999999999999 5554
Q ss_pred HHHHHhHH-HHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHH
Q 020863 164 LALSSLAG-VIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVN 242 (320)
Q Consensus 164 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~ 242 (320)
........ ..++... ... .... .. .....+.... .....+.......+..|.+|++.|+++.|+.+..+
T Consensus 323 ~~~~~~~~l~~~~~~~--~~~-~~~~----~~--~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~ 392 (452)
T PRK11273 323 ATGVFFMTLVTIATIV--YWL-NPAG----NP--TVDMACMIVI-GFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFG 392 (452)
T ss_pred hHHHHHHHHHHHHHHH--HHH-hccc----Ch--HHHHHHHHHH-HHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHH
Confidence 32211111 1111111 111 1110 10 1111111111 11111222223345679999999999999999888
Q ss_pred HHHHHH-HHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHH-hhcccCC
Q 020863 243 WISNLI-VAQTFLTVAELVGTGATFLILAGIAVLAVVFVI-LFVPETQ 288 (320)
Q Consensus 243 ~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~pet~ 288 (320)
++++.+ ++.+...+.+..|+...|.+++++++++++... +..+|+|
T Consensus 393 ~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 440 (452)
T PRK11273 393 YLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKR 440 (452)
T ss_pred HHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 887655 677778888888888888877777777666554 3344543
No 20
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.62 E-value=5.3e-14 Score=127.12 Aligned_cols=239 Identities=19% Similarity=0.182 Sum_probs=143.4
Q ss_pred chHHHHhhhhHHHHHHHHHhhcCCCChHHHHhcCCHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHhccccchhhhcc
Q 020863 10 TWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFK 89 (320)
Q Consensus 10 ~WR~~f~i~~~~~l~~~~~~~~lpESp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 89 (320)
+||+.|.+.++..++..+....+||+|+.. +.+ ++.. + +.. ..++..++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~-~~~~----------------~--------~~~----~~~~~~~~ 222 (417)
T PRK10489 174 GVAWNYGLAAAGTFITLLPLLRLPALPPPP--QPR-EHPL----------------R--------SLL----AGFRFLLA 222 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhCCCCCCCC--ccc-ccch----------------H--------HHH----HHHHHHHc
Confidence 699999999888887777777888875321 000 0000 0 000 01223455
Q ss_pred chhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHH-hCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHH
Q 020863 90 SKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSS 168 (320)
Q Consensus 90 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~ 168 (320)
++..+..++..... .. . .....+.|.+.++ .|.+....+... ....+..+++.++.+++.||.++|+.+..+
T Consensus 223 ~~~~~~~~~~~~~~-~~--~---~~~~~~~p~~~~~~~g~~~~~~g~~~-~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~ 295 (417)
T PRK10489 223 SPVVGGIALLGGLL-TM--A---SAVRVLYPALADEVWQMGAAQIGLLY-AAVPLGAALGALTSGWLAHSARPGLLMLLS 295 (417)
T ss_pred ChHHHHHHHHHHHH-HH--H---HhHHHhhHHHHHhccCCChhHhHHHH-HHHHHHHHHHHHHHHHhhhccCcchHHHHH
Confidence 55554443332211 11 1 1223345666666 677655444433 344555778889999999997766665544
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHH
Q 020863 169 LAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLI 248 (320)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~ 248 (320)
.....+..+.+. ..+ .. +...++..++... .....+..+.+..|..|++.|+++.|+.+....++..+
T Consensus 296 ~~~~~~~~~~~~----~~~-----~~--~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~ 363 (417)
T PRK10489 296 TLGSFLAVGLFG----LMP-----MW--ILAVLCLALFGYL-SAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAI 363 (417)
T ss_pred HHHHHHHHHHHH----ccc-----hH--HHHHHHHHHHHHH-HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhH
Confidence 433333322211 111 11 1111222222111 11112344567789999999999999999999999999
Q ss_pred HHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHH
Q 020863 249 VAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPETQGLTFLEVEQM 298 (320)
Q Consensus 249 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~g~~~~~~~~~ 298 (320)
++.+.+.+.+..|....+...+++.++..++.....|++|++++||+|+.
T Consensus 364 g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (417)
T PRK10489 364 GAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGELRRFRQTPPEVD 413 (417)
T ss_pred HHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcccccccccccccCC
Confidence 99999998888887777777777766666667788899999999987754
No 21
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.61 E-value=1.5e-13 Score=127.03 Aligned_cols=161 Identities=17% Similarity=0.211 Sum_probs=97.9
Q ss_pred eeehHHHHH-HhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcc
Q 020863 116 MYYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGV 194 (320)
Q Consensus 116 ~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (320)
..+.|.+++ ..|.+..+.+.. .....+..+++.+++|+++||+|||+....+.....+..+.+ . .... ..
T Consensus 295 ~~~lp~~l~~~~g~~~~~~g~~-~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~--~-~~~~-----~~ 365 (496)
T PRK03893 295 QALLPTYLKTDLGYDPHTVANV-LFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPV--F-AIGG-----AN 365 (496)
T ss_pred HHHHHHHHHhhcCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH--h-hccc-----cH
Confidence 345677774 777776554444 445555678999999999999999988665443332222111 1 1110 00
Q ss_pred hhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHH-
Q 020863 195 YGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIA- 273 (320)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~- 273 (320)
.+ ..............+..+....+..|.+|++.|+++.|+.+..+.+++.+++.+...+.+..|+...+...++..
T Consensus 366 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~ 443 (496)
T PRK03893 366 -VW-VLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLT 443 (496)
T ss_pred -HH-HHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHH
Confidence 11 111111111222334445556778899999999999999999999999999888888888777766665444333
Q ss_pred HHHHHHHHhhcccC
Q 020863 274 VLAVVFVILFVPET 287 (320)
Q Consensus 274 ~~~~~~~~~~~pet 287 (320)
+++.+...+..|+.
T Consensus 444 ~~~~~~~~~~~~~~ 457 (496)
T PRK03893 444 FVVILLIGLDMPSR 457 (496)
T ss_pred HHHHHHHHhcCcHH
Confidence 33333334445543
No 22
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.60 E-value=1.5e-13 Score=123.28 Aligned_cols=231 Identities=18% Similarity=0.224 Sum_probs=122.2
Q ss_pred CchHHHHhhhhHHHHHHHHHhhcCCCChHHHHhcCCHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHhccccchhhhc
Q 020863 9 GTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVF 88 (320)
Q Consensus 9 ~~WR~~f~i~~~~~l~~~~~~~~lpESp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 88 (320)
.+||+.|++.+++.++.++.+..+||+|++...+.++++..+..++..+.... .. +..+.. ....++..
T Consensus 165 ~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------~~~~~~-~~~~~~~~ 233 (405)
T TIGR00891 165 DGWRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHR---IA-------NIVMTL-AAAMVQSA 233 (405)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchh---hh-------hhhhhh-hHHhhhhh
Confidence 35999999998888887777788999998754332222111111111110000 00 000000 00011111
Q ss_pred cchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHH-HHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHH
Q 020863 89 KSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIV-QMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALS 167 (320)
Q Consensus 89 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~ 167 (320)
++.+...........+..+.. .....+.|.++ +..|.+..+.... .....+...++.++.++++||+|||+.+..
T Consensus 234 --~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~s~~~~~~~-~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~ 309 (405)
T TIGR00891 234 --GKRWPTFVYLVVLVLFANLYS-HPIQDLLPTYLKADLGLSPHTVANI-VVFSNIGAIVGGCVFGFLGDWLGRRKAYVC 309 (405)
T ss_pred --hhhhHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHhCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCchhhhHH
Confidence 111111111111111111211 12223445444 4567765554443 344555678999999999999999998765
Q ss_pred HhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHH
Q 020863 168 SLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNL 247 (320)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~ 247 (320)
+...+.+....+ ..... .. +...... .....+..+..+....+.+|.+|++.|+++.|+.+..+++++.
T Consensus 310 ~~~~~~~~~~~~---~~~~~-----~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ 378 (405)
T TIGR00891 310 SLLAGQLLIIPV---FAIGA-----NV--AVLGLGL-FFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGA 378 (405)
T ss_pred HHHHHHHHHHHH---HHhCC-----ch--HHHHHHH-HHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHH
Confidence 544332211111 11111 10 1111111 1122223344455567889999999999999999999999999
Q ss_pred HHHHHHHHHHHHhc-chhH
Q 020863 248 IVAQTFLTVAELVG-TGAT 265 (320)
Q Consensus 248 ~~~~~~~~~~~~~g-~~~~ 265 (320)
+++.+...+.+..| +...
T Consensus 379 ~g~~~~g~l~~~~g~~~~~ 397 (405)
T TIGR00891 379 LAPIIGALLAQRLDEYGTA 397 (405)
T ss_pred HHHHHHHHHHHhccccchh
Confidence 99999998888877 5433
No 23
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.60 E-value=8.5e-14 Score=125.30 Aligned_cols=153 Identities=20% Similarity=0.259 Sum_probs=94.4
Q ss_pred eeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcch
Q 020863 116 MYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVY 195 (320)
Q Consensus 116 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (320)
..+.|.++++.|.+....... .....+..+++.++.|+++||+|||+....+.....++...+ .. .. ..
T Consensus 240 ~~~~p~~~~~~g~s~~~~~~~-~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~--~~--~~-----~~- 308 (406)
T PRK11551 240 LNWLPSLLVGQGLSRSQAGLV-QIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAAL--AA--AP-----SF- 308 (406)
T ss_pred HHHHHHHHHhCCCChhhhhHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH--Hh--cC-----cH-
Confidence 345678888888766554443 334455678999999999999999988765433333322221 11 11 11
Q ss_pred hHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-chhHHHHHHHHHH
Q 020863 196 GWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG-TGATFLILAGIAV 274 (320)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~ 274 (320)
+...+ ..++..+...+..+..+.+.+|.+|++.|+++.|+.+..+.+++.+++.+...+.+..+ +...+...+.+.+
T Consensus 309 -~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~ 386 (406)
T PRK11551 309 -AGMLL-AGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVIL 386 (406)
T ss_pred -HHHHH-HHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHH
Confidence 11111 11222222223345566788999999999999999999999999999988887776544 3334444444444
Q ss_pred HHHHHHH
Q 020863 275 LAVVFVI 281 (320)
Q Consensus 275 ~~~~~~~ 281 (320)
++.+..+
T Consensus 387 ~~~~~~~ 393 (406)
T PRK11551 387 VAALAAL 393 (406)
T ss_pred HHHHHHH
Confidence 4444433
No 24
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.59 E-value=6.4e-14 Score=128.43 Aligned_cols=179 Identities=17% Similarity=0.215 Sum_probs=103.3
Q ss_pred hccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHH-HhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHH
Q 020863 87 VFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLA 165 (320)
Q Consensus 87 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~ 165 (320)
.++++..+...+... +. ...+.....|.|.+++ ..|.+..+.... ........+++.+++|+++||+|||+..
T Consensus 254 ~l~~~~~~~~~~~~~----~~-~~~~~~~~~~~p~yl~~~~g~s~~~a~~~-~~~~~~~~~ig~~~~G~lsDr~g~r~~~ 327 (467)
T PRK09556 254 VLKNPVIWLLCFANI----FL-YIVRIGIDNWSPVYAFQELGFSKEDAINT-FTLFEIGALVGSLLWGWLSDLANGRRAL 327 (467)
T ss_pred HHcChHHHHHHHHHH----HH-HHHHHHHHHHHHHHHHHccCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCchH
Confidence 566666655433321 11 1122334466777665 567766554443 3444455789999999999999999865
Q ss_pred HHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHH-
Q 020863 166 LSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWI- 244 (320)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~- 244 (320)
........++...+ .+.... .. ....+....+ .++..+.....+.+..|.+|++.|+++.|+.+..+++
T Consensus 328 ~~~~~~~~~~~~~~--~~~~~~-----~~--~~~~~~~~~~-G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~ 397 (467)
T PRK09556 328 VACIALALIIFTLG--VYQHAT-----SE--YMYLASLFAL-GFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLF 397 (467)
T ss_pred HHHHHHHHHHHHHH--HHHhcC-----cH--HHHHHHHHHH-HHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHH
Confidence 54332222221111 111111 11 1111111111 1111222222235667999999999999999999997
Q ss_pred HHHHHHHHHHHHHH------------HhcchhHHHHHHHHHHHHHHHHH
Q 020863 245 SNLIVAQTFLTVAE------------LVGTGATFLILAGIAVLAVVFVI 281 (320)
Q Consensus 245 ~~~~~~~~~~~~~~------------~~g~~~~~~~~~~~~~~~~~~~~ 281 (320)
++.+++.+...+.+ ..||...|.++.++.+++.+...
T Consensus 398 g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 398 GDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred hHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHH
Confidence 66788888888777 45677788777777776655443
No 25
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.58 E-value=3.4e-14 Score=122.58 Aligned_cols=239 Identities=19% Similarity=0.233 Sum_probs=131.2
Q ss_pred CchHHHHhhhhHHHHHHHHH-hhcCCCChHHHHhcCCHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHhccccc----
Q 020863 9 GTWRWMLGVSAVPAIIQFVL-MLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVR---- 83 (320)
Q Consensus 9 ~~WR~~f~i~~~~~l~~~~~-~~~lpESp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 83 (320)
.+||..|++.++.+++..++ .+.+.|+|+-. --.+.||-+ + ++.+.. +++.+. +..+
T Consensus 182 ~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~-GLP~ie~~~-------~-----d~~e~~----~~~~~~-~~ls~~~i 243 (448)
T COG2271 182 GGWRAAFYFPGIIAIIVALILLFLLRDRPQSE-GLPPIEEYR-------G-----DPLEIY----EEEKEN-EGLTAWQI 243 (448)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhCCCcccc-CCCCHHHhh-------c-----Cchhhh----hhhccC-CCccHHHH
Confidence 38999999999998876444 55677777431 001111111 0 000000 011110 0011
Q ss_pred -hhhhccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHH-hCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhh--
Q 020863 84 -YLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHF-- 159 (320)
Q Consensus 84 -~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~-- 159 (320)
.+..++||..|...+..+.+.. .=+.+..|.|.++.+ .+++..+. .......-.++++|+++.||++||+
T Consensus 244 ~~~YVL~Nk~iW~la~a~vfvYi-----vR~gi~dW~p~YL~e~k~~s~~~a-~~a~~lfE~agl~G~Ll~GwlSDklfk 317 (448)
T COG2271 244 FVKYVLKNKLIWLLALANVFVYV-----VRYGINDWGPLYLSEVKGFSLVKA-NWAISLFEVAGLPGTLLAGWLSDKLFK 317 (448)
T ss_pred HHHHHHcChHHHHHHHHHHHHHH-----HHHHHhhhHHHHHHHhcCCCHHHH-HHHHHHHHHHhhHHHHHHHHHHHHhcc
Confidence 3346788877765554332211 112344567765554 56654444 4444444555899999999999995
Q ss_pred cchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHH
Q 020863 160 GRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSA 239 (320)
Q Consensus 160 grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~ 239 (320)
|||......+.......+ ..+...+.. + .++..+ ..+...++.-|+--+.-..+.|..|.+.-|++.|+..
T Consensus 318 grR~p~~~i~~~~i~~~~---~~~w~~~~~--~---~~l~~~-~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~G 388 (448)
T COG2271 318 GRRGPMALIFMLLITASL---VLYWLAPNG--S---YLLDAI-LLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVG 388 (448)
T ss_pred cccchHHHHHHHHHHHHH---HHHHcCCCc--c---HHHHHH-HHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhh
Confidence 577654322211111111 111111111 1 112222 2222233333343344567789999999999999999
Q ss_pred HHHHH-HHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHH
Q 020863 240 TVNWI-SNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFV 280 (320)
Q Consensus 240 ~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 280 (320)
.++.+ |+..+......+.+..||...|+++.+.++++.+..
T Consensus 389 lf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll 430 (448)
T COG2271 389 LFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLL 430 (448)
T ss_pred hHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHH
Confidence 99998 777766666666677899888888776666665543
No 26
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.56 E-value=3.1e-13 Score=124.45 Aligned_cols=235 Identities=13% Similarity=0.073 Sum_probs=132.3
Q ss_pred CchHHHHhhhhHHHHHHHHHhhcCCCChHHHHhcCCHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHhccccchhhhc
Q 020863 9 GTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVF 88 (320)
Q Consensus 9 ~~WR~~f~i~~~~~l~~~~~~~~lpESp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 88 (320)
.+||..|++.++..++..+..+++||+|+.. ++++..+ +. ...++++.+
T Consensus 171 ~GWr~~f~i~a~l~ll~~l~~~~~~e~~~~~----~~~~~~~-----------------------~~----~~~~l~~~~ 219 (491)
T PRK11010 171 LGWQGMYWLMAALLIPCIIATLLAPEPTDTI----PVPKTLE-----------------------QA----VVAPLRDFF 219 (491)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHhcCCCcccc----ccccchh-----------------------hh----HHHHHHHHH
Confidence 4799999999988888777766789986421 1000000 00 001233455
Q ss_pred cchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHH
Q 020863 89 KSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSS 168 (320)
Q Consensus 89 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~ 168 (320)
++++.+....... +...... ....+..|++.+..|.+..+.+........+..+++.+++|+++||+|||+.+..+
T Consensus 220 ~~~~~~~~ll~~~-l~~~~~~---~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~ 295 (491)
T PRK11010 220 GRNNAWLILLLIV-LYKLGDA---FAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIF 295 (491)
T ss_pred cCcCHHHHHHHHH-HHHHHHH---HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 5555444333322 1111111 11223445555667887665554433344455789999999999999998876544
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHH
Q 020863 169 LAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLI 248 (320)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~ 248 (320)
.....++...+... .... ... +.......+.....+.+. +..+++..++.|++.+++..|+.+....++..+
T Consensus 296 ~~l~~l~~l~~~~l-~~~~----~~~--~~l~~~~~l~~~~~g~~~-~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~ 367 (491)
T PRK11010 296 GILQGVSNAGYWLL-SITD----KNL--YSMGAAVFFENLCGGMGT-AAFVALLMTLCNKSFSATQFALLSALSAVGRVY 367 (491)
T ss_pred HHHHHHHHHHHHHH-Hhcc----ccH--HHHHHHHHHHHHHHHHHH-HHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHH
Confidence 43333332222111 1111 011 111111111111111112 223577789999999999999999988888888
Q ss_pred HHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhcccC
Q 020863 249 VAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPET 287 (320)
Q Consensus 249 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet 287 (320)
++.....+.+..|+...|.+.+.+.+.+.+... ..+++
T Consensus 368 ~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~-~~~~~ 405 (491)
T PRK11010 368 VGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLL-VCRQT 405 (491)
T ss_pred HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH-HHHhc
Confidence 887778888888887777777777776655543 34443
No 27
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.56 E-value=2.2e-13 Score=121.52 Aligned_cols=247 Identities=19% Similarity=0.302 Sum_probs=130.5
Q ss_pred CchHHHHhhhhHHHHHHHHHh-hcCCCChHHHHhcCCHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHhccccchhhh
Q 020863 9 GTWRWMLGVSAVPAIIQFVLM-LFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDV 87 (320)
Q Consensus 9 ~~WR~~f~i~~~~~l~~~~~~-~~lpESp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (320)
.+||+.|.+.+++.++..+.. ...||+|+--. ..++++..+..++... +..+++.+.++....++.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~ 211 (399)
T TIGR00893 145 FSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAK-WLTEEEKYIVVGGLLA------------EQQGKGPSTPKKYQIKEL 211 (399)
T ss_pred CCchHHHHHHHHHHHHHHHHhhheecCCCCccc-cCCHHHHhhcchhhcc------------ccccccccCCCccchHHH
Confidence 469999999888877765553 45677663210 0111111000000000 000000111112235566
Q ss_pred ccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHH-HhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHH
Q 020863 88 FKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLAL 166 (320)
Q Consensus 88 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~ 166 (320)
+++++.+...+.... ..........+.|.+++ ..+.+..+.. .......+..+++.+++++++||+|||+...
T Consensus 212 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 285 (399)
T TIGR00893 212 LKDRRVWGLALGQFL-----VNIGLGFFLTWFPTYLVQERGLSILEAG-FMASLPGIVGFIGMILGGRLSDLLLRRGKSL 285 (399)
T ss_pred hcCHHHHHHHHHHHH-----HHhHHHHHHHHHHHHHHHHhcccHHHhh-HHHHHHHHHHHHHHHHHHHHHHHHhhcccch
Confidence 777665544333211 11222233345566655 4565544433 3344455567889999999999999996211
Q ss_pred HH-hHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHH
Q 020863 167 SS-LAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWIS 245 (320)
Q Consensus 167 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~ 245 (320)
.. ......+.............. ... +. .... .....+..+..+..+.+.+|.+|++.|+++.|+.+....++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g 359 (399)
T TIGR00893 286 VFARKTAIIAGLVLSLLMFATNYV--NIP--YA-ALAL-VALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLG 359 (399)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccc--hhH--HH-HHHH-HHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHh
Confidence 11 111111111111111111100 011 11 1111 11122233356677889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhc-chhHHHHHHHHHHHHHHHH
Q 020863 246 NLIVAQTFLTVAELVG-TGATFLILAGIAVLAVVFV 280 (320)
Q Consensus 246 ~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~ 280 (320)
+.+++.+...+.+..| +...+.+.+++.+++.+..
T Consensus 360 ~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 360 GIVGPIVIGAIAATTGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred hhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHH
Confidence 9999998888888777 7777777666666665544
No 28
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.56 E-value=7.2e-14 Score=127.07 Aligned_cols=253 Identities=15% Similarity=0.199 Sum_probs=132.7
Q ss_pred CchHHHHhhhhHHHHHHH-HHhhcCCCChHHHHhcCCHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHhccccchhhh
Q 020863 9 GTWRWMLGVSAVPAIIQF-VLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDV 87 (320)
Q Consensus 9 ~~WR~~f~i~~~~~l~~~-~~~~~lpESp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (320)
.+||+.|++.++.+++.. +....+||+|+....+ +.+..+ . .......+ +.+++.+. ++.....+
T Consensus 182 ~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~---~-~~~~~~~~-------~~~~~~~~-~~~~~~~~ 247 (438)
T TIGR00712 182 NDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLP--PIEEYR---N-DYPDDYNE-------KAEQELTA-KEIFMQYV 247 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCC--Cchhcc---c-cccccccc-------ccccccch-HHHHHHHH
Confidence 479999999888877754 4456789988652111 101000 0 00000000 00000000 00001134
Q ss_pred ccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHH-hCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHH
Q 020863 88 FKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLAL 166 (320)
Q Consensus 88 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~ 166 (320)
++++..+...+..... ....+....|.|.++++ .|.+...... ...+..+.++++.+++|+++||+++|+...
T Consensus 248 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~p~~l~~~~g~s~~~~~~-~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~ 321 (438)
T TIGR00712 248 LPNKLLWYIAIANVFV-----YLLRYGVLDWSPTYLKEVKHFALDKSSW-AYFLYEYAGIPGTLLCGWMSDKVFKGNRGA 321 (438)
T ss_pred ccCchHHHHHHHHHHH-----HHHHHHHHHhHHHHHHHccCCChhhHHH-HHHHHHHHHHHHHHHHHHHHHHhccCcccH
Confidence 5666665543332211 11222334566777765 4666544333 344555567899999999999996543222
Q ss_pred HHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHH
Q 020863 167 SSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISN 246 (320)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~ 246 (320)
.+............ .+...... +. +......... .+...+..........|.+|++.|+++.|+.+..++.++
T Consensus 322 ~~~~~~~~~~~~~~-~~~~~~~~--~~---~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg 394 (438)
T TIGR00712 322 TGVFFMTLVTIAVI-VYWMNPAG--NP---LVDMICMIVI-GFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGG 394 (438)
T ss_pred HHHHHHHHHHHHHH-HHHhcCCC--ch---HHHHHHHHHH-HHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhh
Confidence 22211111111111 11111110 11 1111111111 111112222223456799999999999999988888765
Q ss_pred -HHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhcccCC
Q 020863 247 -LIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPETQ 288 (320)
Q Consensus 247 -~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~ 288 (320)
.+++.+...+.+..|+...+.+.+++..++.+...+..||.|
T Consensus 395 ~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 395 SVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred hhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 567888888888888888888888877777777778888865
No 29
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.55 E-value=4e-13 Score=119.92 Aligned_cols=216 Identities=18% Similarity=0.125 Sum_probs=115.0
Q ss_pred CchHHHHhhhhHHHHHHHHHhhcCCCChHHHHhcCCHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHhccccchhhhc
Q 020863 9 GTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVF 88 (320)
Q Consensus 9 ~~WR~~f~i~~~~~l~~~~~~~~lpESp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 88 (320)
.+||+.|++.+++.++..+.+..+||+|++...+++. ++...+.++.+
T Consensus 167 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~ 214 (394)
T TIGR00883 167 WGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEKH--------------------------------KKKRGPIRETL 214 (394)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhcc--------------------------------ccccCCHHHHH
Confidence 4799999999988888777777888988653211000 00111233444
Q ss_pred cchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHH-HHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHH
Q 020863 89 KSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIV-QMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALS 167 (320)
Q Consensus 89 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~ 167 (320)
++++.+. ........+ .....+....+.|.+. +..+.+...... ......+...++.+++++++||+|||+....
T Consensus 215 ~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~ 290 (394)
T TIGR00883 215 TKHRKPF--LLGLGLVIA-TTTTFYLITTYLPTYLTQTLGLSANSALL-VLMLSLILFFITIPLSGALSDRIGRRPVLII 290 (394)
T ss_pred HhchHHH--HHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCChhHHHH-HHHHHHHHHHHHHHHHHHHHHHhchHHHHHH
Confidence 4433111 111111111 1122233334566666 456666544333 3444555578888999999999999997654
Q ss_pred HhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHH-HHHHH
Q 020863 168 SLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATV-NWISN 246 (320)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~-~~~~~ 246 (320)
......+.......... ... .. +.......+.... .....+..+.+.+|.+|++.|+++.|+.... +.++.
T Consensus 291 ~~~~~~~~~~~~~~~~~-~~~----~~--~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~ 362 (394)
T TIGR00883 291 FTVLAALLAVPLLMALL-DSG----SF--TLFFFLVLGLALI-GGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFG 362 (394)
T ss_pred HHHHHHHHHHHHHHHHh-cCC----ch--HHHHHHHHHHHHH-HHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHh
Confidence 33322222211111111 111 11 1111111111111 1122344567889999999999998885544 44666
Q ss_pred HHHHHHHHHHHHHhc-chhHHHH
Q 020863 247 LIVAQTFLTVAELVG-TGATFLI 268 (320)
Q Consensus 247 ~~~~~~~~~~~~~~g-~~~~~~~ 268 (320)
.+++.+...+.+..| +...++.
T Consensus 363 ~~~p~~~g~l~~~~g~~~~~~~~ 385 (394)
T TIGR00883 363 GFAPYIAAALVAMTGDWYAIGYY 385 (394)
T ss_pred hHHHHHHHHHHHHcCcchhHHHH
Confidence 677777777777776 4444333
No 30
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.54 E-value=1.1e-13 Score=124.75 Aligned_cols=147 Identities=14% Similarity=0.110 Sum_probs=86.7
Q ss_pred cceeeeehHHHHHHh--CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHH-HHhHHHHHHHHHHHHHHHhcCC
Q 020863 112 INTVMYYSPTIVQMA--GFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLAL-SSLAGVIISLVLLSWAFISGSS 188 (320)
Q Consensus 112 ~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~-~~~~~~~~~~~~~~~~~~~~~~ 188 (320)
++.+..|.|.++++. +.+.... ........+...++.+++|+++||++||+... .......+.. ..... ..
T Consensus 258 ~~~~~~~~p~~l~~~~~~~s~~~~-~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~---~~~~~-~~- 331 (412)
T TIGR02332 258 LSAINIWTPQILQSFNQGSSNIMI-GLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGW---LLASA-TD- 331 (412)
T ss_pred HHHHHHHHHHHHHhcCCCCcHHHh-HHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHH---HHHHh-cC-
Confidence 344556788888874 3343333 33344555667899999999999999877532 2222222211 11111 10
Q ss_pred CCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-chhHHH
Q 020863 189 ASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG-TGATFL 267 (320)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~ 267 (320)
.. .....++... .+......+..+....|.+|++.|+++.|+.+..+++++.+++.+...+.+..| +...+.
T Consensus 332 ---~~---~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~ 404 (412)
T TIGR02332 332 ---HN---LIQLLGIIMA-SMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLW 404 (412)
T ss_pred ---CH---HHHHHHHHHH-HHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHH
Confidence 01 1111111111 111111223345566789999999999999999999999999988887777665 666665
Q ss_pred HHHH
Q 020863 268 ILAG 271 (320)
Q Consensus 268 ~~~~ 271 (320)
++++
T Consensus 405 ~~~~ 408 (412)
T TIGR02332 405 FVAA 408 (412)
T ss_pred HHHH
Confidence 5444
No 31
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.53 E-value=4.7e-13 Score=118.74 Aligned_cols=147 Identities=16% Similarity=0.092 Sum_probs=92.8
Q ss_pred hHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHH
Q 020863 119 SPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWI 198 (320)
Q Consensus 119 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (320)
.+.+.++.+.+...... ......+...++.++.|+++||+|||+.+..+.....++...+... . .. ....
T Consensus 228 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~--~~-----~~~~ 297 (377)
T TIGR00890 228 YKPYGQSLGLSDGFLVL-AVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFI--P--ML-----NDVL 297 (377)
T ss_pred HHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHc--c--cc-----hhHH
Confidence 34455666765443333 3444555678899999999999999998766554444443322211 1 00 0111
Q ss_pred HHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHH
Q 020863 199 AVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLA 276 (320)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 276 (320)
......+.. ....+..+....+.+|.+|++.|+++.|+.+....+++.+++.+...+.+..|+...|.+.+++.+++
T Consensus 298 ~~~~~~~~g-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 298 FLATVALVF-FTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHHHHH-HHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 111111111 11112233445678899999999999999999999999999988888888888877777766665544
No 32
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.48 E-value=4.8e-12 Score=112.53 Aligned_cols=152 Identities=16% Similarity=0.234 Sum_probs=88.9
Q ss_pred hHHHH-HHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhH
Q 020863 119 SPTIV-QMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGW 197 (320)
Q Consensus 119 ~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (320)
.|.++ +..|.+....+.. .........++.+++|++.||+|||+....+.....+....+ .... .. +
T Consensus 222 ~~~~~~~~~g~~~~~~g~~-~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~--~~~~-------~~--~ 289 (375)
T TIGR00899 222 MPLLIIHELGLPDKLAGLM-MGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGL--AADN-------SL--W 289 (375)
T ss_pred hHHHHHHHcCCCHHHHHHH-HHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHH--HHHH-------HH--H
Confidence 44444 5567665443332 223334456778889999999999997765443322222111 1110 00 1
Q ss_pred HHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHH
Q 020863 198 IAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAV 277 (320)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 277 (320)
.......+.....+ ...+....+..|.+|++ |+++.|+.+...+++..+++.+...+.+..|+...|.+.+.+.+++.
T Consensus 290 ~~~~~~~~~g~~~g-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 367 (375)
T TIGR00899 290 ALLMLQLLNAIFIG-ILAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVAL 367 (375)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHH
Confidence 11111111111111 12334456778998876 56899999988889999998888888887888777777776666665
Q ss_pred HHHHhhcc
Q 020863 278 VFVILFVP 285 (320)
Q Consensus 278 ~~~~~~~p 285 (320)
+.. .+++
T Consensus 368 ~~~-~~~~ 374 (375)
T TIGR00899 368 FCL-LLIK 374 (375)
T ss_pred HHH-heec
Confidence 543 3443
No 33
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.46 E-value=6.1e-12 Score=112.79 Aligned_cols=164 Identities=13% Similarity=0.091 Sum_probs=104.1
Q ss_pred eeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCc
Q 020863 114 TVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSG 193 (320)
Q Consensus 114 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (320)
....+.|.++++.|.+...... ...+..+.++++.++.+++.||+|||+....+.....++...+.+ .... .
T Consensus 223 ~~~~~lp~~l~~~g~s~~~ag~-~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~---~~~~----~ 294 (393)
T PRK09705 223 SLIAWLPAFYIEIGASAQYSGS-LLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIW---LPLQ----L 294 (393)
T ss_pred HHHHHHHHHHHHcCCChhhhhH-HHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHH---ccch----H
Confidence 3445667777778877554444 344555668899999999999999998776654443333322211 1110 0
Q ss_pred chhHHHHHHHHHHHHHHhccccccchhcccccC-CccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-chhHHHHHHH
Q 020863 194 VYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVY-PEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG-TGATFLILAG 271 (320)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Elf-P~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~ 271 (320)
...... +. .....+..+.......+.+ |++.|++..|+.+..+.+++.+++.+...+.+..| +...|.+.++
T Consensus 295 --~~~~~~---l~-g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~ 368 (393)
T PRK09705 295 --PVLWAM---VC-GLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHAL 368 (393)
T ss_pred --HHHHHH---HH-HHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHH
Confidence 011111 11 1111122233334445666 46789999999999999999999999988888876 5566777666
Q ss_pred HHHHHHHHHHhhcccCCCCC
Q 020863 272 IAVLAVVFVILFVPETQGLT 291 (320)
Q Consensus 272 ~~~~~~~~~~~~~pet~g~~ 291 (320)
+++++.+....+.|||+.+.
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK09705 369 CVVGLMIITLRFAPARFPQL 388 (393)
T ss_pred HHHHHHHHHHHhccccccch
Confidence 66667676778899997664
No 34
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.46 E-value=1e-12 Score=120.66 Aligned_cols=150 Identities=12% Similarity=0.112 Sum_probs=79.4
Q ss_pred ehHHHH-HHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchH-----HHHHHhHHHHHHHHHHHHHHHhcCCCCC
Q 020863 118 YSPTIV-QMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKK-----LALSSLAGVIISLVLLSWAFISGSSASS 191 (320)
Q Consensus 118 ~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (320)
+.|.++ +..|.+...... ......++..++.+++|+++||++||+ .... .....+..+... ......
T Consensus 274 ~~p~~l~~~~g~s~~~a~~-~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~-~~~~~l~~i~~~-~~~~~~---- 346 (476)
T PLN00028 274 IIAEYFYDRFGLSLETAGA-IAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWAL-WIVQTLGGVFCI-WLGRAN---- 346 (476)
T ss_pred HHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHH-HHHHHHHHHHHH-Hhcccc----
Confidence 455554 455877555443 444555668899999999999999762 1111 111111111111 111110
Q ss_pred CcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHH
Q 020863 192 SGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAG 271 (320)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 271 (320)
.. ...+....++..+.. ...+..+.+.+|+.| +.|+++.|+.+..+++++.+++.+.. .....++...|.+.++
T Consensus 347 -~~--~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~ 420 (476)
T PLN00028 347 -SL--GAAIVVMILFSIFVQ-AACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGV 420 (476)
T ss_pred -hH--HHHHHHHHHHHHHHH-HhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHH
Confidence 10 111111112111111 122334566777755 67999999988888888877766542 1112246667777777
Q ss_pred HHHHHHHHH
Q 020863 272 IAVLAVVFV 280 (320)
Q Consensus 272 ~~~~~~~~~ 280 (320)
+.+++.++.
T Consensus 421 ~~~i~~~~~ 429 (476)
T PLN00028 421 MIIACTLPV 429 (476)
T ss_pred HHHHHHHHH
Confidence 776665544
No 35
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.45 E-value=1.6e-12 Score=119.20 Aligned_cols=239 Identities=18% Similarity=0.178 Sum_probs=122.7
Q ss_pred chHHHHhhhhHHHHHHHHHhh-cCCCChHHHHhcCCHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHH-Hhccccchhhh
Q 020863 10 TWRWMLGVSAVPAIIQFVLML-FMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEEL-RKKKTVRYLDV 87 (320)
Q Consensus 10 ~WR~~f~i~~~~~l~~~~~~~-~lpESp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l 87 (320)
+||+.|.+.++++++..++++ ..+|+|+.....+++|+ +. +.+..+++. +.+++.+++++
T Consensus 196 gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~--~~----------------i~~~~~~~~~~~~~~~~~~~~ 257 (465)
T TIGR00894 196 GWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEK--KY----------------INSSLQGQKGSTRQSLPIKAI 257 (465)
T ss_pred CCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHH--HH----------------HHhhcccccCCCCCCCCHHHH
Confidence 799999999999887766654 56788854211111111 00 000000000 11112346677
Q ss_pred ccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHH-HhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHH
Q 020863 88 FKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLAL 166 (320)
Q Consensus 88 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~ 166 (320)
++++..+...+.. +....+.+....|.|.+++ ..|.+....+.... ...+...++.+++|+++||+++|+...
T Consensus 258 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~-~~~~~~~i~~~~~g~l~d~~~~~~~~~ 331 (465)
T TIGR00894 258 PKSLPVWAIWFAI-----FGHFWLYTILPTYLPTFISWVLRVSGKENGLLSS-LPYLFAWLCSIFAGYLADFLKSSKTLS 331 (465)
T ss_pred hcCHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHH-HHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 8777766544432 2222233344456777665 46776655444444 445557899999999999987553210
Q ss_pred ---HHhHHHHHHH---HHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHH
Q 020863 167 ---SSLAGVIISL---VLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSAT 240 (320)
Q Consensus 167 ---~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~ 240 (320)
.......++. ............ .. +..+....+.. .+..+..+..+....|..|. .+|.+.|+.+.
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~ 403 (465)
T TIGR00894 332 LTAARKIFNGIGGLGPGIFAYALPYLSA----AF--YLTIIILTLAN-AVSSGPLAGVLINSLDLAPR-FLGFIKGITGL 403 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCC----ch--HHHHHHHHHHH-HHhhhhhhhhhhchhhcChh-HHHHHHHHHHH
Confidence 0001111111 111111111110 11 11122222111 11111223334455677765 79999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHh--c-chhHHHHHHHHHHHHHHHH
Q 020863 241 VNWISNLIVAQTFLTVAELV--G-TGATFLILAGIAVLAVVFV 280 (320)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~--g-~~~~~~~~~~~~~~~~~~~ 280 (320)
.+.+++++++.+...+.+.. + +...|.+.+++.+++.++.
T Consensus 404 ~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~ 446 (465)
T TIGR00894 404 PGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFY 446 (465)
T ss_pred HHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHe
Confidence 99988888887776554432 2 5566777776666665543
No 36
>PRK03545 putative arabinose transporter; Provisional
Probab=99.45 E-value=1.3e-11 Score=110.68 Aligned_cols=219 Identities=18% Similarity=0.202 Sum_probs=122.1
Q ss_pred chHHHHhhhhHHHHHHHHH-hhcCCCChHHHHhcCCHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHhccccchhhhc
Q 020863 10 TWRWMLGVSAVPAIIQFVL-MLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVF 88 (320)
Q Consensus 10 ~WR~~f~i~~~~~l~~~~~-~~~lpESp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 88 (320)
+||+.|++.++++++..+. +..+||.|+- + ++. . .+..+.+
T Consensus 161 gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~-----~-~~~---------------------------~-----~~~~~~~ 202 (390)
T PRK03545 161 GWRTTFLAIGGGALITLLLLIKLLPLLPSE-----H-SGS---------------------------L-----KSLPLLF 202 (390)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCCCCC-----C-cch---------------------------H-----HHHHHHH
Confidence 7999999999888766444 4456776421 0 000 0 0122355
Q ss_pred cchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHH
Q 020863 89 KSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSS 168 (320)
Q Consensus 89 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~ 168 (320)
++++.+......... ....+ ....+..|.+.+..|.+....... .....+..+++.++.++++||++||......
T Consensus 203 ~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~l~~~~g~s~~~~~~~-~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~ 277 (390)
T PRK03545 203 RRPALVSLYLLTVVV-VTAHF---TAYSYIEPFVQQVAGLSENFATLL-LLLFGGAGIIGSVLFSRLGNRHPSGFLLIAI 277 (390)
T ss_pred hCcHHHHHHHHHHHH-HHHHH---HHHHHHHHHHHHhcCCCccHHHHH-HHHHHHHHHHHHHHHHHHhhccchhHHHHHH
Confidence 666655443332211 11111 111233344444457665544443 3445556789999999999999988754332
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHH
Q 020863 169 LAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLI 248 (320)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~ 248 (320)
. ...++...+. . ... .. +...++..+.. ....+.++....+..|..| +.|+++.|+.+....++..+
T Consensus 278 ~-~~~~~~~~l~-~--~~~-----~~--~~~~~~~~l~g-~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~ 344 (390)
T PRK03545 278 A-LLLVCLLLLL-P--AAN-----SE--WHLSVLSIFWG-IAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGA 344 (390)
T ss_pred H-HHHHHHHHHH-H--Hhc-----hH--HHHHHHHHHHH-HHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHH
Confidence 2 2222211111 1 110 10 11111111111 1122223333455667777 57899999998888889989
Q ss_pred HHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhc
Q 020863 249 VAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFV 284 (320)
Q Consensus 249 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 284 (320)
++.+.+.+.+..|+...|.+.+.+.+++.++.....
T Consensus 345 G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 345 GALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 988888888888888888888877777776655444
No 37
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.44 E-value=7.7e-12 Score=112.82 Aligned_cols=172 Identities=12% Similarity=0.076 Sum_probs=110.5
Q ss_pred HHHhhcCcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHH
Q 020863 105 AFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFI 184 (320)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~ 184 (320)
.+.++..-....+..|.+.++.+.+..+.....+. ......++.+..|+++||+|||+.+..+.....++.......
T Consensus 17 ~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~-~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~-- 93 (412)
T TIGR02332 17 FIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATL-FYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFA-- 93 (412)
T ss_pred HHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHH-HHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh--
Confidence 33334444445556677778888876665554443 444467888999999999999998876665554444433221
Q ss_pred hcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHH------
Q 020863 185 SGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAE------ 258 (320)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~------ 258 (320)
. + ...+....++......+..+....+.+|.+|++.|+++.|+......++..+++.+...+..
T Consensus 94 ~--~--------~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 163 (412)
T TIGR02332 94 T--G--------PESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMA 163 (412)
T ss_pred c--C--------HHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 1 0 01111222222222222345555678999999999999999888877887777766555543
Q ss_pred HhcchhHHHHHHHHHHHHHHHHHhhcccCCC
Q 020863 259 LVGTGATFLILAGIAVLAVVFVILFVPETQG 289 (320)
Q Consensus 259 ~~g~~~~~~~~~~~~~~~~~~~~~~~pet~g 289 (320)
..||...|.+.+...++..++.++++||+..
T Consensus 164 ~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 164 LKGWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred ccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 2478888888777766666666677888764
No 38
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.44 E-value=9.1e-12 Score=112.51 Aligned_cols=143 Identities=14% Similarity=0.146 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccch
Q 020863 140 AVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPW 219 (320)
Q Consensus 140 ~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (320)
...+..+++.+..++++||+|||+++..+.....++...+... . .. ... .+...+...+...... ...+...
T Consensus 259 ~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~--~-~~---~~~-~~~l~l~~~l~g~~~~-~~~~~~~ 330 (418)
T TIGR00889 259 LSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYG--D-PE---YFG-YALLFLSMIVYGCAFD-FFNISGS 330 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc--C-cc---hhh-HHHHHHHHHHHHHHHH-HHHHHHH
Confidence 3444467788899999999999998877665544443222211 0 00 000 0111111111111111 1233445
Q ss_pred hcccccCCccchhhhHHHHH-HHHHHHHHHHHHHHHHHHHHh------cchhHHHHHHHHHHHHHHHHHhhcccCCCC
Q 020863 220 TLNSEVYPEQYRGICGGMSA-TVNWISNLIVAQTFLTVAELV------GTGATFLILAGIAVLAVVFVILFVPETQGL 290 (320)
Q Consensus 220 ~~~~ElfP~~~R~~~~gi~~-~~~~~~~~~~~~~~~~~~~~~------g~~~~~~~~~~~~~~~~~~~~~~~pet~g~ 290 (320)
.+.+|.+|++.|+++.|+.+ ....+++.+++.+...+.+.. ||...|.+.+++.+++.+..+++.||+++.
T Consensus 331 ~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~ 408 (418)
T TIGR00889 331 VFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHNA 408 (418)
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 67889999999999999996 556678888888888777764 356678777777777777778888888654
No 39
>TIGR00895 2A0115 benzoate transport.
Probab=99.44 E-value=4.4e-12 Score=113.44 Aligned_cols=164 Identities=23% Similarity=0.224 Sum_probs=108.8
Q ss_pred ceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCC
Q 020863 113 NTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSS 192 (320)
Q Consensus 113 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (320)
....++.|.+.++.|.+..+.+...+ .......++.++.|+++||+|||+.+..+.....++....... .
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~----~----- 103 (398)
T TIGR00895 34 AAMGFAAPAISAEWGLDPVQLGFLFS-AGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALA----T----- 103 (398)
T ss_pred HHHHhhHHHHhhccCCCHHHHHHHHH-HHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHc----c-----
Confidence 33446678888888887655444433 4445578899999999999999998876655544443332211 1
Q ss_pred cchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHH
Q 020863 193 GVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGI 272 (320)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 272 (320)
. . +..++ ..+..........+....+.+|.+|++.|+++.|+......++..+++.+...+.+..|+...+.+.+.+
T Consensus 104 ~-~-~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~ 180 (398)
T TIGR00895 104 N-V-TQLLI-LRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIA 180 (398)
T ss_pred c-h-HHHHH-HHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhH
Confidence 0 0 11111 1222222222334556788899999999999999999888889888888777777777877777776555
Q ss_pred HHHHHHHHHhhcccCCC
Q 020863 273 AVLAVVFVILFVPETQG 289 (320)
Q Consensus 273 ~~~~~~~~~~~~pet~g 289 (320)
..+..++...++||+..
T Consensus 181 ~~~~~~~~~~~~~~~~~ 197 (398)
T TIGR00895 181 PLLLLLLLMRFLPESID 197 (398)
T ss_pred HHHHHHHHHHhCCCCCh
Confidence 55555556677888643
No 40
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.43 E-value=1.5e-12 Score=118.99 Aligned_cols=217 Identities=13% Similarity=0.064 Sum_probs=113.6
Q ss_pred hhccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhh--cchH
Q 020863 86 DVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHF--GRKK 163 (320)
Q Consensus 86 ~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~--grR~ 163 (320)
++++++.++....... + . ..++.....+.|.+.++.+.+....+.. ..+..+..+++.+++++++||. ++|+
T Consensus 236 ~~~~~~~~~~~~~~~~-l---~-~~~~~~~~~~l~~~~~~~g~s~~~~g~~-~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 309 (455)
T TIGR00892 236 SLFTHRGFLVYLSGNV-I---M-FLGFFAPIIFLVPYAKDKGVDEYEAAFL-LSIIGFVDIFARPSCGLIAGLKWIRPHV 309 (455)
T ss_pred HHhcCchHHHHHHHHH-H---H-HHHccchHHHHHHHHHHcCCCHHHHHHH-HHHHHHHHHHHHHHHHHHhcccccCHHH
Confidence 4667666654333211 1 1 1222333345666777777765554443 3344555677888899999973 3343
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHH
Q 020863 164 LALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNW 243 (320)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~ 243 (320)
...........+...+.... .. . . +..++...++ ........+..+.+..|.+|++.|+++.|+.+....
T Consensus 310 ~~~~~~~~~~~~l~~ll~~~--~~-----~-~-~~~~i~~~~~-G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 379 (455)
T TIGR00892 310 QYLFSFALLFNGLTHLLCAL--AG-----D-Y-TGLVIYCIFF-GLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVEC 379 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHH--hc-----h-H-HHHHHHHHHH-HHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHH
Confidence 33222111111111111111 11 1 1 1111111111 122222234456777899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhc-chhHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHhcccccccCcchhhcccCC
Q 020863 244 ISNLIVAQTFLTVAELVG-TGATFLILAGIAVLAVVFVILFVPETQGLTFLEVEQMWKERAWGSSLNTESLLEHGN 318 (320)
Q Consensus 244 ~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~pet~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (320)
+++.+++.+...+.+..+ +...|.+.+++.++++++..+-.-+-.++.-.|-+...++.+.++++++|.+..|.|
T Consensus 380 lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (455)
T TIGR00892 380 CAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLFLAIGNYINYRLLAKEQKAALEREGARDKKDAEGDSRESE 455 (455)
T ss_pred HHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCC
Confidence 999999888887777664 666676665555554443222111222333333344555555566666666555543
No 41
>TIGR00895 2A0115 benzoate transport.
Probab=99.43 E-value=2.8e-12 Score=114.72 Aligned_cols=227 Identities=20% Similarity=0.232 Sum_probs=114.9
Q ss_pred CchHHHHhhhhHHHHH-HHHHhhcCCCChHHHHhcCCHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHhccccchhhh
Q 020863 9 GTWRWMLGVSAVPAII-QFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDV 87 (320)
Q Consensus 9 ~~WR~~f~i~~~~~l~-~~~~~~~lpESp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (320)
.+||+.|.+.++..++ .++...++||+|++...+ +.+++.+..++.......+.+ ++..++ ++.+...+.....+
T Consensus 168 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~ 243 (398)
T TIGR00895 168 FGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSK-RPETVRRIVNAIAPQMQAEAQ-SALPEQ--KATQGTKRSVFKAL 243 (398)
T ss_pred ccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhc-CHHHHHHHHHHHHHhcccccc-cccccc--ccccchhhHHHHHH
Confidence 4799999998655554 445567899999887655 344433333322111100000 000000 00000000111223
Q ss_pred ccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHH
Q 020863 88 FKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALS 167 (320)
Q Consensus 88 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~ 167 (320)
++++..+........ .. .....+.....+.|.+.+..+.+...... ......+..+++.+++++++||+|||+....
T Consensus 244 ~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 320 (398)
T TIGR00895 244 FQGKTARITVLLWLL-YF-MLLVGVYFLTNWLPKLMVELGFSLSLAAT-GGALFNFGGVIGSIIFGWLADRLGPRVTALL 320 (398)
T ss_pred hcchhHHHHHHHHHH-HH-HHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHhhcchHHHHHH
Confidence 333322222222111 11 11223333445667777777876554443 3444555678999999999999999954433
Q ss_pred HhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHH
Q 020863 168 SLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNL 247 (320)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~ 247 (320)
... ..+....+.. ... . . ........+. .....+..+..+.+.+|.+|++.|+++.|+....+.++..
T Consensus 321 ~~~-~~~~~~~~~~--~~~-~----~---~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ 388 (398)
T TIGR00895 321 LLL-GAVFAVLVGS--TLF-S----P---TLLLLLGAIA-GFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAI 388 (398)
T ss_pred HHH-HHHHHHHHHH--Hhh-C----H---HHHHHHHHHH-HHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 222 2222222111 011 0 1 1111111111 1222223455678889999999999999999998888888
Q ss_pred HHHHHHH
Q 020863 248 IVAQTFL 254 (320)
Q Consensus 248 ~~~~~~~ 254 (320)
+++.+..
T Consensus 389 ~g~~~~G 395 (398)
T TIGR00895 389 IGPILAG 395 (398)
T ss_pred HHHHhHH
Confidence 7766544
No 42
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.41 E-value=2.6e-11 Score=115.40 Aligned_cols=159 Identities=18% Similarity=0.118 Sum_probs=98.6
Q ss_pred eeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcc
Q 020863 115 VMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGV 194 (320)
Q Consensus 115 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (320)
+....|.+.+..+.+....++..+ ...++.+++.+++|+++||+|||+.++.+.+...++.+...+. . .
T Consensus 186 is~ilp~i~~~~gls~~~~g~l~s-~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa--~-------s- 254 (742)
T TIGR01299 186 VGFVLPSAEKDLCIPDSGKGMLGL-IVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFV--Q-------G- 254 (742)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH--h-------h-
Confidence 445567788888887666555444 4455578999999999999999998877655444443332221 1 0
Q ss_pred hhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-------------c
Q 020863 195 YGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELV-------------G 261 (320)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~-------------g 261 (320)
...++...++..+...+..+....+.+|.+|++.|+...++......+|.++++.+...+.... +
T Consensus 255 --~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~g 332 (742)
T TIGR01299 255 --YGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHS 332 (742)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhcccccccccc
Confidence 1112222222233333345677889999999999999999888777777776655433332222 3
Q ss_pred chhHHHHHHHHHHHHHHHHHhhcccC
Q 020863 262 TGATFLILAGIAVLAVVFVILFVPET 287 (320)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~pet 287 (320)
|...+++.+...+ ..++..+++||+
T Consensus 333 WR~l~~i~~lp~l-l~ll~~~~lPES 357 (742)
T TIGR01299 333 WRVFVIVCAFPCV-FAIGALTFMPES 357 (742)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHcCCC
Confidence 4444444444333 334556788998
No 43
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.39 E-value=6.4e-12 Score=112.03 Aligned_cols=162 Identities=16% Similarity=0.183 Sum_probs=109.1
Q ss_pred eeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcc
Q 020863 115 VMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGV 194 (320)
Q Consensus 115 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (320)
.....|.+.++.|.+..+.+...+ .......++.++.|+++||+|||+.+..+.....++....... . .
T Consensus 13 ~~~~~~~~~~~~g~s~~~~~~~~~-~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~--~-------~- 81 (399)
T TIGR00893 13 LSFAAPMLQEDLGLSAAQYGYVFS-AFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFA--G-------A- 81 (399)
T ss_pred hhHhHHHHHHhhCCChhhHHHHHH-HHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHH--c-------C-
Confidence 344567788888887666554444 4455578899999999999999998776655544444333221 1 0
Q ss_pred hhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Q 020863 195 YGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAV 274 (320)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 274 (320)
+ +...+. .+..........+....+.+|.+|++.|+++.|+......++..+++.+...+.+..++...|.+.+.+.+
T Consensus 82 ~-~~~~~~-~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 159 (399)
T TIGR00893 82 Y-VSLYIL-RVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGI 159 (399)
T ss_pred H-HHHHHH-HHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHH
Confidence 0 111121 12222222233455567889999999999999999999999998888877777777888888887777766
Q ss_pred HHHHHHHhhcccCCC
Q 020863 275 LAVVFVILFVPETQG 289 (320)
Q Consensus 275 ~~~~~~~~~~pet~g 289 (320)
+..+..+++.||++.
T Consensus 160 ~~~~~~~~~~~~~~~ 174 (399)
T TIGR00893 160 IWGVLWLKFIPDPPQ 174 (399)
T ss_pred HHHHHhhheecCCCC
Confidence 666655566676544
No 44
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.39 E-value=3.9e-11 Score=107.92 Aligned_cols=225 Identities=13% Similarity=0.091 Sum_probs=115.7
Q ss_pred CchHHHHhhhhHHHHHHHHHhhcCCCChHHHHhcCCHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHhccccchhhhc
Q 020863 9 GTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVF 88 (320)
Q Consensus 9 ~~WR~~f~i~~~~~l~~~~~~~~lpESp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 88 (320)
.+||..|++.++..++..+...++||+++.. +++++.. ++. ..++++++
T Consensus 158 ~gw~~~f~i~a~~~l~~~l~~~~~~e~~~~~---~~~~~~~------------------------~~~----~~~~~~l~ 206 (402)
T PRK11902 158 LGWGNTYLLMAGLMLAGALTTLWAPEPEVPA---RPPRSLG------------------------EAV----VGPLRDFF 206 (402)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHhcCCCcccc---cccchhH------------------------HHH----HHHHHHHH
Confidence 3799999998888877666667788876431 1100000 000 01234567
Q ss_pred cchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHH
Q 020863 89 KSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSS 168 (320)
Q Consensus 89 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~ 168 (320)
++|..+..+............. ..+..+.+.+..|.+....+........+..+++.++++++.||+|||+....+
T Consensus 207 ~~~~~~~~l~~~~l~~~~~~~~----~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~ 282 (402)
T PRK11902 207 SRRGAWALLLLIVLYKLGDAFA----GSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLF 282 (402)
T ss_pred hCcCHHHHHHHHHHHHhHHHHH----HHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 7776665444322221111111 112334556667776554444333333344678899999999999999876544
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHH---HHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHH
Q 020863 169 LAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLA---LYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWIS 245 (320)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~ 245 (320)
.....+....+... ..... .. +....... +..........+....+..+.+|.+.++. ......++
T Consensus 283 ~~~~~l~~l~~~~~-~~~~~----~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~ 351 (402)
T PRK11902 283 GVLQAVSNLGYWVL-AVTPK----HL--WTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQYAL----LSALASVG 351 (402)
T ss_pred HHHHHHHHHHHHHH-HhcCC----cH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHH----HHHHHHHH
Confidence 44333332222111 11110 11 11111111 11111122223344567777888665543 33334445
Q ss_pred HHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHH
Q 020863 246 NLIVAQTFLTVAELVGTGATFLILAGIAVLAVVF 279 (320)
Q Consensus 246 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 279 (320)
...++.+-..+.+..|+...|...+.+++++.++
T Consensus 352 ~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~ 385 (402)
T PRK11902 352 RVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLAL 385 (402)
T ss_pred HHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 5444555566677888877777777666666543
No 45
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.39 E-value=6.1e-11 Score=106.38 Aligned_cols=155 Identities=12% Similarity=0.142 Sum_probs=89.2
Q ss_pred ehHHHHH-HhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchh
Q 020863 118 YSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 196 (320)
Q Consensus 118 ~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (320)
+.|.+++ ..+.+......... ...+..+++.+++|+++||+|||+....+.....+....+ .. . . ..
T Consensus 238 ~~p~~l~~~~~~~~~~~g~~~~-~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~--~~-~-~-----~~-- 305 (393)
T PRK15011 238 NMPLFIINELHLPEKLAGVMMG-TAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGM--LM-A-H-----SP-- 305 (393)
T ss_pred HHHHHHHHHcCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH--HH-H-h-----hH--
Confidence 4565554 45666544444333 3334467788999999999999987654433332221111 11 1 1 00
Q ss_pred HHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHH
Q 020863 197 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLA 276 (320)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 276 (320)
+..+....+.....+.. .+....+..|.+|.+ |+++.++.+...+++..+++.+...+.+..|+...+.+.+++.+++
T Consensus 306 ~~~l~~~~l~~~~~g~~-~~~~~~~~~~~~p~~-~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~ 383 (393)
T PRK15011 306 AILLGLQLLNAIYIGIL-GGIGMLYFQDLMPGQ-AGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIAT 383 (393)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 11111111111111111 122235667999865 8899999888888888888888888777778777777666666665
Q ss_pred HHHHHhhcccC
Q 020863 277 VVFVILFVPET 287 (320)
Q Consensus 277 ~~~~~~~~pet 287 (320)
.+ ..++.||+
T Consensus 384 ~~-~~~~~~~~ 393 (393)
T PRK15011 384 LF-CLLRIKDV 393 (393)
T ss_pred HH-HHHhhcCC
Confidence 54 34455654
No 46
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.38 E-value=2.3e-12 Score=116.85 Aligned_cols=138 Identities=25% Similarity=0.423 Sum_probs=83.5
Q ss_pred CCchHHHHhhhhHHHHHHHHH-hhcCCCChH--HHHhcCCHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHhccccch
Q 020863 8 PGTWRWMLGVSAVPAIIQFVL-MLFMPESPR--WLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRY 84 (320)
Q Consensus 8 ~~~WR~~f~i~~~~~l~~~~~-~~~lpESp~--~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (320)
..+|||+|++.+++.++..++ .+++|+.|. |+.. ++|+. -+.++.++.+. . ...++.+...+
T Consensus 202 ~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~--~~ek~-~~~~~~~~~~~----------~--~~~~~~~~~~~ 266 (495)
T KOG2533|consen 202 LAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLT--DEEKE-LVVERLRESPS----------G--GIENKFKWKGF 266 (495)
T ss_pred cCCceeehhHHHHHHHHHHheEEEEecCChhhccccc--hHHHH-HHHHHHHhccC----------C--CcccccCHHHH
Confidence 357999999999999876544 678999997 3321 12111 11111110000 0 00000223456
Q ss_pred hhhccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHH-hCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhh----h
Q 020863 85 LDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDH----F 159 (320)
Q Consensus 85 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr----~ 159 (320)
++.++++..|...+. .+......+...+|+|.++++ .+.+. ..+...+++..+.++++.+++|+++|| .
T Consensus 267 ~~a~~dp~vw~~~l~-----~~~~~lv~~~~~~~lpl~l~~~~~~s~-~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~ 340 (495)
T KOG2533|consen 267 KEALKDPGVWPFSLC-----YFFLKLVNYGFSYWLPLYLKSNGGYSE-LQANLLSTPYDVGGIVGLILAGYLSDRLKTIF 340 (495)
T ss_pred HHHHhchhHHHHHHH-----HHHHhhccccHHHHHHHHHHcCCCcCh-HHhccccchHHhhhHHHHHHHHHHHHHHhhhH
Confidence 778888887665444 222233445677889999888 33443 345566778888899999999999999 5
Q ss_pred cchHHHH
Q 020863 160 GRKKLAL 166 (320)
Q Consensus 160 grR~~~~ 166 (320)
.+|....
T Consensus 341 ~~~~~~~ 347 (495)
T KOG2533|consen 341 ARRLLFI 347 (495)
T ss_pred HHHHHHH
Confidence 5555443
No 47
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.37 E-value=1.5e-11 Score=111.25 Aligned_cols=134 Identities=13% Similarity=0.098 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchh
Q 020863 141 VAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWT 220 (320)
Q Consensus 141 ~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (320)
.....+++.+++|+++||+|||+....+.....+....+.. .+ .. +.......+.... .....+....
T Consensus 271 ~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~----~~-----~~--~~~~~~~~l~g~~-~~~~~~~~~~ 338 (420)
T PRK09528 271 QVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGF----AT-----GP--LEVSILKLLHAFE-VPFLLVGVFK 338 (420)
T ss_pred HHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHh----cc-----cH--HHHHHHHHHHHHH-HHHHHHHHHH
Confidence 34446788999999999999999876554444433332221 11 11 1111111111111 1111122346
Q ss_pred cccccCCccchhhhHHH-HHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhccc
Q 020863 221 LNSEVYPEQYRGICGGM-SATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPE 286 (320)
Q Consensus 221 ~~~ElfP~~~R~~~~gi-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pe 286 (320)
+.+|.+|++.|++..+. .+....+++.+++.....+.+..|+...|.+.+++.++..++.++..++
T Consensus 339 ~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 339 YITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 77889999999887665 4556678888888888888888888888888777776666555555444
No 48
>PRK03545 putative arabinose transporter; Provisional
Probab=99.37 E-value=5.2e-11 Score=106.66 Aligned_cols=159 Identities=21% Similarity=0.186 Sum_probs=105.2
Q ss_pred eehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchh
Q 020863 117 YYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 196 (320)
Q Consensus 117 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (320)
...|.+.++.+.+..+.+...+ .......++.+..|+++||+|||+.+..+.....++....... + ..
T Consensus 30 ~~~~~l~~~~~~s~~~~g~~~~-~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~----~-----~~-- 97 (390)
T PRK03545 30 GLLSDIAQSFHMQTAQVGLMLT-IYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALA----W-----NF-- 97 (390)
T ss_pred cchHHHHhHcCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHh----c-----cH--
Confidence 3467888899988766555444 3344467788888999999999999887765555544333221 1 11
Q ss_pred HHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHH
Q 020863 197 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLA 276 (320)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 276 (320)
+ .+....+..........+....+.+|.+|++.|+++.|+......++..+++.+...+.+..||...|.+.+.+.++.
T Consensus 98 ~-~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~ 176 (390)
T PRK03545 98 T-VLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALIT 176 (390)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHH
Confidence 1 111111111221112234445677899999999999999888888888888877777777788888888877777666
Q ss_pred HHHHHhhcccCC
Q 020863 277 VVFVILFVPETQ 288 (320)
Q Consensus 277 ~~~~~~~~pet~ 288 (320)
.+..+...||.+
T Consensus 177 ~~~~~~~~~~~~ 188 (390)
T PRK03545 177 LLLLIKLLPLLP 188 (390)
T ss_pred HHHHHHhCCCCC
Confidence 655556667643
No 49
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.37 E-value=7.8e-11 Score=106.34 Aligned_cols=173 Identities=12% Similarity=0.051 Sum_probs=109.3
Q ss_pred HHHHhhcCcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHH
Q 020863 104 QAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF 183 (320)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~ 183 (320)
..+..+.......--.|.+.++.+.+........+ .......++.++.|+++||+|||+.+..+.....++.......
T Consensus 24 ~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s-~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a- 101 (413)
T PRK15403 24 YDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVS-LYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFT- 101 (413)
T ss_pred HHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHH-HHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHc-
Confidence 33333333333334456677788887666555444 3445577889999999999999998876655444443332211
Q ss_pred HhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcch
Q 020863 184 ISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTG 263 (320)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~ 263 (320)
+ .. + .++...+..........+..+.+..|.+|++.|++..++......++..+++.+-..+.+..||.
T Consensus 102 ---~-----~~--~-~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~ 170 (413)
T PRK15403 102 ---T-----SM--T-QFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWK 170 (413)
T ss_pred ---C-----CH--H-HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 1 11 1 11111122221111223345678889999999999999888888888888777666666667888
Q ss_pred hHHHHHHHHHHHHHHHHHhhcccCCC
Q 020863 264 ATFLILAGIAVLAVVFVILFVPETQG 289 (320)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~pet~g 289 (320)
..|++.+.+.++..+..++.+||++.
T Consensus 171 ~~f~~~~~~~~i~~~~~~~~lp~~~~ 196 (413)
T PRK15403 171 VLFAIIAVMGLIAFVGLLLAMPETVK 196 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 88888777777666655667898754
No 50
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.37 E-value=5.5e-11 Score=108.06 Aligned_cols=161 Identities=19% Similarity=0.165 Sum_probs=107.1
Q ss_pred eeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCc
Q 020863 114 TVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSG 193 (320)
Q Consensus 114 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (320)
....+.|.+.++.|.+..+.+...+ ...+...++.+++|+++||+|||+.+..+.....++.+...... .
T Consensus 41 ~~~~~~~~~~~~~g~s~~~~g~~~~-~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~---------~ 110 (434)
T PRK11663 41 SFNAAMPEMLADLGLSRSDIGLLAT-LFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSS---------S 110 (434)
T ss_pred hHHHhhHHHHHhcCCCHHHHHHHHH-HHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHh---------H
Confidence 3455678888999987666555444 44555788999999999999999988776665555544332210 0
Q ss_pred chhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHH
Q 020863 194 VYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIA 273 (320)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 273 (320)
. + .+....+..........+....+.+|.+|++.|+++.|+.+....+++.+++.+...+.+..||...|.+.+.+.
T Consensus 111 ~--~-~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~ 187 (434)
T PRK11663 111 L--W-AFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIA 187 (434)
T ss_pred H--H-HHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 0 1 111111111111112234456788999999999999999999888999888887777777788888888776665
Q ss_pred HHHHHHHHhhcccC
Q 020863 274 VLAVVFVILFVPET 287 (320)
Q Consensus 274 ~~~~~~~~~~~pet 287 (320)
++..++..+++||+
T Consensus 188 ~~~~~~~~~~~~~~ 201 (434)
T PRK11663 188 IVVGLFLCWRLRDK 201 (434)
T ss_pred HHHHHHHHHHcCCC
Confidence 55544445566664
No 51
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.36 E-value=3.7e-11 Score=107.20 Aligned_cols=163 Identities=17% Similarity=0.137 Sum_probs=108.6
Q ss_pred eeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcc
Q 020863 115 VMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGV 194 (320)
Q Consensus 115 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (320)
.....|.+.++.|.+..+.....+ .......++.++.|+++||+|||+.+..+.....++....... + .
T Consensus 24 ~~~~~p~~~~~~g~s~~~~g~~~~-~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~----~-----~- 92 (385)
T TIGR00710 24 YLPAFPEIAADLSTPASIVQMTLT-LYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALS----N-----N- 92 (385)
T ss_pred hcccHHHHHHHhCCCHHHHHHHHH-HHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH----c-----c-
Confidence 334567888888987766554444 4455578899999999999999998877665554444433221 1 1
Q ss_pred hhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Q 020863 195 YGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAV 274 (320)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 274 (320)
. +...+ ..+..........+....+..|.+|++.|++..|+......++..+++.+...+.+..++...+.+.+.+.+
T Consensus 93 ~-~~~~~-~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~ 170 (385)
T TIGR00710 93 I-ETLLV-LRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGI 170 (385)
T ss_pred H-HHHHH-HHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 0 11111 111112211122344557888999999999999999988888888888877777777788888877777766
Q ss_pred HHHHHHHhhcccCCCC
Q 020863 275 LAVVFVILFVPETQGL 290 (320)
Q Consensus 275 ~~~~~~~~~~pet~g~ 290 (320)
+..+..++..||++.+
T Consensus 171 ~~~~~~~~~~~~~~~~ 186 (385)
T TIGR00710 171 LLSALIFFILPETLPY 186 (385)
T ss_pred HHHHHHHHhCCCCCCC
Confidence 6666666677887544
No 52
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.36 E-value=2.9e-12 Score=113.72 Aligned_cols=228 Identities=18% Similarity=0.237 Sum_probs=113.8
Q ss_pred CchHHHHhhhhHHHHHH-HHHhhcCCCChHHHHhcCCHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHhccccchhhh
Q 020863 9 GTWRWMLGVSAVPAIIQ-FVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDV 87 (320)
Q Consensus 9 ~~WR~~f~i~~~~~l~~-~~~~~~lpESp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (320)
.+||+.|++.++..++. ++....+||+|+....+.++++..+ +.+ ++ . +.+++.....+...+++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~---~~----~-~~~~~~~~~~~~~~~~~ 212 (379)
T TIGR00881 147 YSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMPNE------EPD---GD----A-EKKEEELTKKQIFLQYV 212 (379)
T ss_pred CCchhHHHHHHHHHHHHHHHHheeeCCCccccccCccccCccc------ccc---cc----c-ccccccccchHHHHHHH
Confidence 47999999988777665 4445677887753211110000000 000 00 0 00000000011123445
Q ss_pred ccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHH-HhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-hHHH
Q 020863 88 FKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGR-KKLA 165 (320)
Q Consensus 88 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~gr-R~~~ 165 (320)
++++..+...+..... .........+.|.+++ ..+.+..+... ......+...++.+++++++||.++ |+..
T Consensus 213 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~ 286 (379)
T TIGR00881 213 LLNKVLWYISLGYVFV-----YVVRTGILDWSPLYLTQEKGFSKEKASW-AFTLYELGGLVGTLLAGWLSDKLFNGRRGP 286 (379)
T ss_pred HhcchHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHcchhHHHHHHHHHHHcCCcchH
Confidence 6666555443332211 1111223344565554 45766544433 3444555678899999999998643 3322
Q ss_pred HHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHH
Q 020863 166 LSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWIS 245 (320)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~ 245 (320)
.. ..........+... ..... .. ........ +....+..+..+..+.+.+|.+|++.|+++.|+.+..+.++
T Consensus 287 ~~-~~~~~~~~~~~~~~-~~~~~---~~--~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 358 (379)
T TIGR00881 287 LA-VFFMALIIVSLLVY-WLNPA---AN--PLMDLICL-FALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLG 358 (379)
T ss_pred HH-HHHHHHHHHHHHHH-hcCcc---hh--HHHHHHHH-HHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhh
Confidence 21 11111111111111 11000 01 01111111 11122233334445677889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcchh
Q 020863 246 NLIVAQTFLTVAELVGTGA 264 (320)
Q Consensus 246 ~~~~~~~~~~~~~~~g~~~ 264 (320)
+.+++.+...+.+..|+..
T Consensus 359 ~~~~~~~~g~l~~~~g~~~ 377 (379)
T TIGR00881 359 GILAGLPLGYLADGFGWAG 377 (379)
T ss_pred hhhhhhhHHHHHHhhcccc
Confidence 9999998888888777644
No 53
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.36 E-value=5.3e-11 Score=106.63 Aligned_cols=224 Identities=15% Similarity=0.048 Sum_probs=118.8
Q ss_pred chHHHHhhhhHHHHHHHHHhhcCCCChHHHHhcCCHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHhccccchhhhcc
Q 020863 10 TWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFK 89 (320)
Q Consensus 10 ~WR~~f~i~~~~~l~~~~~~~~lpESp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 89 (320)
+||..|++.++..++..+...+++|.++ .++++. + + +..+.++.+|
T Consensus 161 gw~~~f~~~a~l~~~~~~~~~~~~~~~~-----~~~~~~-~-----------------------~-----~~~~~~~~l~ 206 (390)
T TIGR02718 161 GQRPAFLLVACVPLASLVCVLWLKDRAV-----ASPEAP-L-----------------------A-----RRASLFRFFR 206 (390)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCCc-----Cccccc-h-----------------------h-----hHHHHHHHHc
Confidence 7999999999888776655554444321 000000 0 0 0012345666
Q ss_pred chhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHh
Q 020863 90 SKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSL 169 (320)
Q Consensus 90 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~ 169 (320)
+|+.+..+........ .. ... ..+.+.++++.|.+....+............++.+++|++.||+|+|+.+..+.
T Consensus 207 ~~~~~~~~~~~~l~~~-~~-~~~---~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~ 281 (390)
T TIGR02718 207 RPLAWSLLALALLSAM-TA-VSG---FGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGV 281 (390)
T ss_pred CcCHHHHHHHHHHHHH-HH-HHH---HHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 6665554443222111 11 111 123455556678876655444333333345677889999999999999876554
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCc-cchhhhHHHHHHHHHHHHHH
Q 020863 170 AGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPE-QYRGICGGMSATVNWISNLI 248 (320)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~-~~R~~~~gi~~~~~~~~~~~ 248 (320)
....+.... .......... ... ........+.....+.. .+..+....+..++ +.+++..++.++...++..+
T Consensus 282 ~~~~~~~~~-~~~~~~~~~~--~~~--~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~ 355 (390)
T TIGR02718 282 GLAGSLALL-WFAQAAFWLA--PGI--AVAWSCSAFGSLITGIT-SVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELI 355 (390)
T ss_pred HHHHHHHHH-HHHHHHcccC--CcH--HHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHH
Confidence 433222211 1111111000 010 11111111111111111 12223344455555 88999999999999999999
Q ss_pred HHHHHHHHHHHhcchhHHHHHHHHHHHHHH
Q 020863 249 VAQTFLTVAELVGTGATFLILAGIAVLAVV 278 (320)
Q Consensus 249 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 278 (320)
++.+...+.+..|+...|...+++.+++.+
T Consensus 356 g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 356 ASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 999888888888877777766665555443
No 54
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.35 E-value=2.8e-11 Score=110.05 Aligned_cols=206 Identities=12% Similarity=0.116 Sum_probs=107.6
Q ss_pred CchHHHHhhhhHHHHHHHHH-hhcCCCChHHHHhcCCHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHhccccchhhh
Q 020863 9 GTWRWMLGVSAVPAIIQFVL-MLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDV 87 (320)
Q Consensus 9 ~~WR~~f~i~~~~~l~~~~~-~~~lpESp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (320)
.+||+.+.+.++++++..++ .+..+|.++. ++++.. + +.+-...++++
T Consensus 170 ~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~-----~~~~~~-------------------------~-~~~~~~~~~~l 218 (437)
T TIGR00792 170 FGWFMFALVLALIGVVSLIICFFGTKERYSE-----IPKNIE-------------------------K-KLSLKQIFKAL 218 (437)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHcCCEecCCC-----CCcccc-------------------------c-CCCHHHHHHHH
Confidence 47999999999888776555 4567776521 000000 0 00000123456
Q ss_pred ccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHH
Q 020863 88 FKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALS 167 (320)
Q Consensus 88 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~ 167 (320)
+++|.++...+......... +....+.+.+.+....+....+.. .....+..+++.++.++++||+|||+....
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~ 292 (437)
T TIGR00792 219 FKNDQLLILCLAYLFYNLAF-----NIKNGVQVYYFTYVLGDPELFSYM-GSIAIVAGLIGVLLFPRLVKKFGRKILFAG 292 (437)
T ss_pred hCCHHHHHHHHHHHHHHHHH-----HHHcchhheeEeeecCChHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 67777665444322221111 111112222222221122222332 333455578889999999999999998776
Q ss_pred HhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCC-------ccchhhhHHHHHH
Q 020863 168 SLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYP-------EQYRGICGGMSAT 240 (320)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP-------~~~R~~~~gi~~~ 240 (320)
+.....++...+.. ... .. +...+...+.. +......+..+.+.+|..| .+.+|+..|+.+.
T Consensus 293 ~~~~~~~~~~~~~~---~~~-----~~--~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 361 (437)
T TIGR00792 293 GILLMVLGYLIFFF---AGS-----NL--PLILVLIILAG-FGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTF 361 (437)
T ss_pred HHHHHHHHHHHHHH---cch-----hH--HHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHH
Confidence 65544444333221 110 11 11111111111 1111123445667777754 4567888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc
Q 020863 241 VNWISNLIVAQTFLTVAELVGT 262 (320)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~g~ 262 (320)
...++..+++.+...+.+..|+
T Consensus 362 ~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 362 VRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC
Confidence 8999998888888877766554
No 55
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.34 E-value=2.6e-10 Score=99.58 Aligned_cols=215 Identities=21% Similarity=0.256 Sum_probs=129.9
Q ss_pred chHHHHhhhhHHHHHHHHH-hhcCCCChHHHHhcCCHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHhccccchhhhc
Q 020863 10 TWRWMLGVSAVPAIIQFVL-MLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVF 88 (320)
Q Consensus 10 ~WR~~f~i~~~~~l~~~~~-~~~lpESp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 88 (320)
+||..|++-+..+++.++. +..+| |+-. +++ ...+..+..+++
T Consensus 165 GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~------~~~----------------------------~~~~~~~~~~~l 208 (394)
T COG2814 165 GWRATFLAIAVLALLALLLLWKLLP--PSEI------SGS----------------------------LPGPLRTLLRLL 208 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCC--CccC------CCC----------------------------CCcchhHHHHHh
Confidence 6999999999999887655 56788 3210 000 000011234578
Q ss_pred cchhhHHHHHHHHHHHHHHhhcCcc-eeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHH
Q 020863 89 KSKEIRLAFLAGAGLQAFQQFTGIN-TVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALS 167 (320)
Q Consensus 89 ~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~ 167 (320)
|+|+.+..+...... +.+.+ ...|.-|.+.+..|++....++. .+.+++.+++|++++|++.|| +.|+.+..
T Consensus 209 ~~p~v~~~l~~t~l~-----~~g~F~~ftYi~P~L~~v~g~s~~~vs~~-Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~ 281 (394)
T COG2814 209 RRPGVLLGLLATFLF-----MTGHFALYTYIRPFLESVAGFSVSAVSLV-LLAFGIAGFIGNLLGGRLADR-GPRRALIA 281 (394)
T ss_pred cCchHHHHHHHHHHH-----HcchhhhHHhHHHHHHHccCCCHhHHHHH-HHHHHHHHHHHHHHHhhhccc-cchhHHHH
Confidence 888887766653322 22322 23456677777888877665554 455666689999999999999 77776655
Q ss_pred HhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccc-hhcccccCCccchhhhHHHHHHHHHHHH
Q 020863 168 SLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVP-WTLNSEVYPEQYRGICGGMSATVNWISN 246 (320)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ElfP~~~R~~~~gi~~~~~~~~~ 246 (320)
......+....+... .. ..+..+....+ ..++..+.... ....++ .-++.+..+.++....-+++.
T Consensus 282 ~~~l~a~~~l~l~~~---~~-------~~~~~~~~~~~--wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgi 348 (394)
T COG2814 282 ALLLLALALLALTFT---GA-------SPALALALLFL--WGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGI 348 (394)
T ss_pred HHHHHHHHHHHHHHh---cc-------hHHHHHHHHHH--HHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHH
Confidence 444433333332211 11 11222222222 22222232222 233445 335668889999999999999
Q ss_pred HHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHH
Q 020863 247 LIVAQTFLTVAELVGTGATFLILAGIAVLAVVFV 280 (320)
Q Consensus 247 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 280 (320)
.++..+-..+.++.|+....++.+...+++.++.
T Consensus 349 a~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~ 382 (394)
T COG2814 349 ALGAALGGLVLDALGYAATGWVGAALLLLALLLA 382 (394)
T ss_pred HHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Confidence 8888888888888887777777666666665544
No 56
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.33 E-value=4.4e-11 Score=107.24 Aligned_cols=168 Identities=17% Similarity=0.160 Sum_probs=106.9
Q ss_pred cCcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 020863 110 TGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSA 189 (320)
Q Consensus 110 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (320)
.+.+......|.+.++.+.+........ ........++.++.|+++||+|||+.+..+.....++....... +
T Consensus 17 ~~~~~~~~~lp~~~~~~~~s~~~~~~~~-~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~----~-- 89 (392)
T PRK10473 17 AGIDMYLVGLPRIAADLNASEAQLHIAF-SVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLA----E-- 89 (392)
T ss_pred HHHHHHhhhHHHHHHHhCCCHHHHHHHH-HHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHh----C--
Confidence 3333344567888888888765544433 34445567888999999999999998876655544443332211 1
Q ss_pred CCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHH
Q 020863 190 SSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLIL 269 (320)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 269 (320)
.. +..+... +..........+..+.+.+|.+|++.|+++.|+.+....++..+++.+...+.+..+|...+.+.
T Consensus 90 ---~~--~~~~~~~-~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~ 163 (392)
T PRK10473 90 ---TS--SLFLAGR-FLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTM 163 (392)
T ss_pred ---cH--HHHHHHH-HHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHH
Confidence 10 1111111 11111111123345678889999999999999988888888777776655555566777778887
Q ss_pred HHHHHHHHHHHHhhcccCCCC
Q 020863 270 AGIAVLAVVFVILFVPETQGL 290 (320)
Q Consensus 270 ~~~~~~~~~~~~~~~pet~g~ 290 (320)
+.+.++..++.+++.||++.+
T Consensus 164 ~~~~~i~~~~~~~~~~~~~~~ 184 (392)
T PRK10473 164 AAMGILVLLLSLFILKETRPA 184 (392)
T ss_pred HHHHHHHHHHHHHHcCCCCCc
Confidence 777776666666777887543
No 57
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.33 E-value=1.3e-10 Score=104.22 Aligned_cols=159 Identities=16% Similarity=0.138 Sum_probs=105.5
Q ss_pred ehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhH
Q 020863 118 YSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGW 197 (320)
Q Consensus 118 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (320)
..|.+.++.|.+..+.....+.. .....++.++.|.++||+|||+.+..+.....++.+..... + . + +
T Consensus 42 ~l~~~~~~~g~s~~~~g~~~~~~-~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~----~-----~-~-~ 109 (394)
T PRK10213 42 LLTPMAQDLGISEGVAGQSVTVT-AFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFA----N-----S-F-S 109 (394)
T ss_pred hHHHHHHHcCCCHHHHHHHHHHH-HHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHH----C-----h-H-H
Confidence 45667788888766655544443 44467889999999999999998877766655544333221 1 0 0 1
Q ss_pred HHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHH
Q 020863 198 IAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAV 277 (320)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 277 (320)
.+....+..........+....+.+|.+|++.|+.+.|+......++..+++.+...+.+..||...|.+.+.+.++..
T Consensus 110 -~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~ 188 (394)
T PRK10213 110 -LLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCI 188 (394)
T ss_pred -HHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Confidence 1111112222222223345567788999999999999999888888888888888888787888888887766665555
Q ss_pred HHHHhhcccCCC
Q 020863 278 VFVILFVPETQG 289 (320)
Q Consensus 278 ~~~~~~~pet~g 289 (320)
+......||+++
T Consensus 189 l~~~~~~p~~~~ 200 (394)
T PRK10213 189 FWIIKSLPSLPG 200 (394)
T ss_pred HHHHHHCCCCCc
Confidence 444455787654
No 58
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.33 E-value=8.5e-11 Score=105.48 Aligned_cols=163 Identities=18% Similarity=0.198 Sum_probs=102.1
Q ss_pred ceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCC
Q 020863 113 NTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSS 192 (320)
Q Consensus 113 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (320)
.......|.+.++.+.+..+.+...+ .......++.++.|+++||+|||+.+..+.....++....... +
T Consensus 29 ~~~~~~~~~l~~~~~~s~~~~g~~~~-~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~----~----- 98 (405)
T TIGR00891 29 FLVALVLAEVAGEFGLTTVDAASLIS-AALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFA----P----- 98 (405)
T ss_pred HHHHHHHHHHHHHhCCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh----c-----
Confidence 33445567778888887766555444 4445578899999999999999998876655444443332211 1
Q ss_pred cchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc--chhHHHHHH
Q 020863 193 GVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG--TGATFLILA 270 (320)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~ 270 (320)
. ...+....+..........+....+..|.+|++.|+++.|+......++..+++.+...+.+..+ |...|.+.+
T Consensus 99 ~---~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~ 175 (405)
T TIGR00891 99 G---YITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISI 175 (405)
T ss_pred c---HHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHH
Confidence 0 11112222222222223344456788899999999999999988888888888877766666555 666666544
Q ss_pred HHHHHHHHHHHhhcccCCC
Q 020863 271 GIAVLAVVFVILFVPETQG 289 (320)
Q Consensus 271 ~~~~~~~~~~~~~~pet~g 289 (320)
...++ .++.....||++.
T Consensus 176 ~~~~~-~~~~~~~~~~~~~ 193 (405)
T TIGR00891 176 LPIIF-ALWLRKNIPEAED 193 (405)
T ss_pred HHHHH-HHHHHHhCCCChh
Confidence 33333 3334456788643
No 59
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.32 E-value=1.5e-10 Score=104.34 Aligned_cols=160 Identities=17% Similarity=0.106 Sum_probs=102.4
Q ss_pred eehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchh
Q 020863 117 YYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 196 (320)
Q Consensus 117 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (320)
...|.+.++.+.+........+ ...+...++.++.|.++||+|||+.+..+.....++....... . + +
T Consensus 34 ~~~~~~~~~~~~s~~~~~~~~~-~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~--~--~------~- 101 (406)
T PRK15402 34 PGMLAVVEDFNAGAEWVPTSMT-AYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLA--Q--S------I- 101 (406)
T ss_pred cchHHHHHHhCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH--c--c------H-
Confidence 3456677888887655444433 4455577888999999999999998876655554444433221 1 0 0
Q ss_pred HHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHH
Q 020863 197 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLA 276 (320)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 276 (320)
+ .+....+..........+..+.+..|.+|++.|+++.++......++..+++.+...+.+..+|...|.+.+.+.++.
T Consensus 102 ~-~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~ 180 (406)
T PRK15402 102 E-QFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALS 180 (406)
T ss_pred H-HHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHH
Confidence 1 111111111111111234456777899999999988888777777777777777666666678888888777777666
Q ss_pred HHHHHhhcccCCC
Q 020863 277 VVFVILFVPETQG 289 (320)
Q Consensus 277 ~~~~~~~~pet~g 289 (320)
.+..++..||+++
T Consensus 181 ~~~~~~~~~~~~~ 193 (406)
T PRK15402 181 FFGLWRAMPETAG 193 (406)
T ss_pred HHHHHHhCCCCCc
Confidence 6655667788754
No 60
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.32 E-value=1.4e-10 Score=106.60 Aligned_cols=160 Identities=11% Similarity=0.074 Sum_probs=97.0
Q ss_pred ceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCC
Q 020863 113 NTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSS 192 (320)
Q Consensus 113 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (320)
+....+.|.+.++.|.+..+.... .........++.+++|+++||+|||+.+..+.....++.+..... . +
T Consensus 53 ~~~~~~~~~l~~~~gls~~~~g~~-~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~--~--s---- 123 (476)
T PLN00028 53 FAAAPLLPIIRDNLNLTKSDIGNA-GIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLV--S--S---- 123 (476)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHh--c--C----
Confidence 334455677888889876655443 344455567889999999999999998776554444433322211 1 1
Q ss_pred cchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHH---------Hhcch
Q 020863 193 GVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAE---------LVGTG 263 (320)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~---------~~g~~ 263 (320)
. ....+. .+...+...+. .....+.+|.+|++.|+++.|+.+..+.+++.+++.+.+.+.. ..||.
T Consensus 124 -~--~~l~~~-r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr 198 (476)
T PLN00028 124 -A--TGFIAV-RFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWR 198 (476)
T ss_pred -H--HHHHHH-HHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhH
Confidence 0 111111 11111111111 2233467899999999999999888777777777665554432 13688
Q ss_pred hHHHHHHHHHHHHHHHHHhhccc
Q 020863 264 ATFLILAGIAVLAVVFVILFVPE 286 (320)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~pe 286 (320)
..|.+.+++.++..+..+++.++
T Consensus 199 ~~f~i~g~l~l~~~l~~~~~~~~ 221 (476)
T PLN00028 199 IAFFVPGLLHIIMGILVLTLGQD 221 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCc
Confidence 88888777776665555444433
No 61
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.31 E-value=4.6e-11 Score=107.54 Aligned_cols=161 Identities=19% Similarity=0.135 Sum_probs=101.9
Q ss_pred eeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcc
Q 020863 115 VMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGV 194 (320)
Q Consensus 115 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (320)
.....|.+.++.+.+..+.+...+ .......++.++.|+++||+|||+.+..+.....++.+..... . .
T Consensus 34 ~~~~~~~~~~~~~~s~~~~g~~~~-~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~----~-----~- 102 (406)
T PRK11551 34 AGVAAPRMAQEFGLDVAQMGWAFS-AGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQA----W-----D- 102 (406)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHh----c-----c-
Confidence 344567888888887665554444 4455578899999999999999998877655444433322211 1 1
Q ss_pred hhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Q 020863 195 YGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAV 274 (320)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 274 (320)
+ +..++.. +..........+....+.+|.+|++.|+++.|+.+....++..+++.....+.+..+|...|++.+.+.+
T Consensus 103 ~-~~~~~~~-~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (406)
T PRK11551 103 F-PSLLVAR-LLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPL 180 (406)
T ss_pred H-HHHHHHH-HHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHH
Confidence 1 1111111 1112222222344567888999999999999998887778877776655555555667777777666555
Q ss_pred HHHHHHHhhcccCC
Q 020863 275 LAVVFVILFVPETQ 288 (320)
Q Consensus 275 ~~~~~~~~~~pet~ 288 (320)
+..+....++||+.
T Consensus 181 ~~~~~~~~~l~~~~ 194 (406)
T PRK11551 181 LLVPLLMRWLPESR 194 (406)
T ss_pred HHHHHHHHhCCCCh
Confidence 55555556678864
No 62
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.31 E-value=1.7e-10 Score=103.98 Aligned_cols=186 Identities=14% Similarity=0.157 Sum_probs=105.2
Q ss_pred hhhccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHH
Q 020863 85 LDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKL 164 (320)
Q Consensus 85 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~ 164 (320)
.+.+|+|+.|...+.. +..+.++....++.|++.++.- +... .........+.+.+..+++|+++||+|+|++
T Consensus 246 ~~vlk~~~~Wllslly-----~~tFG~fvg~s~~lp~~~~~~~-~~~~-~l~~~~l~~l~~~l~rplgG~LADRiG~~~v 318 (462)
T PRK15034 246 LPVLQRLHLWLLSLLY-----LATFGSFIGFSAGFAMLAKTQF-PDVN-ILRLAFFGPFIGAIARSVGGAISDKFGGVRV 318 (462)
T ss_pred HHHhCCCchhHHHHHH-----HHHHHHHHHHHHHHHHHHHHHc-ChHH-HHHHHHHHHHHHHHHHHhhHHHHHhcCchHH
Confidence 3467777777654442 2223333344557777766522 2211 2222333344467788999999999999998
Q ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccc-cchhcccccCCc------c--------
Q 020863 165 ALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGP-VPWTLNSEVYPE------Q-------- 229 (320)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ElfP~------~-------- 229 (320)
+..+.....++..++.... .... ....+.... .++..+...|.+. ..+-+++..||+ +
T Consensus 319 l~~~~i~~~i~~~~~~l~l--p~~~---~~~~~~~~~--~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~ 391 (462)
T PRK15034 319 TLINFIFMAIFSALLFLTL--PGTG---SGNFIAFYA--VFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQ 391 (462)
T ss_pred HHHHHHHHHHHHHHHHHHh--cccc---ccHHHHHHH--HHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhH
Confidence 8776665555544333222 1110 011111122 2222333334432 345677888885 1
Q ss_pred -------chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-chhHHHHHHHHHHHHHHHHHhhc
Q 020863 230 -------YRGICGGMSATVNWISNLIVAQTFLTVAELVG-TGATFLILAGIAVLAVVFVILFV 284 (320)
Q Consensus 230 -------~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~ 284 (320)
.-|.+.|+....+..|+++.|..+....+..| +...|..+.+..+++.++.+.+.
T Consensus 392 ~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y 454 (462)
T PRK15034 392 AQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVY 454 (462)
T ss_pred HhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 34556777778888888777777776666655 55567777777777766665543
No 63
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.31 E-value=1.6e-10 Score=103.82 Aligned_cols=159 Identities=23% Similarity=0.175 Sum_probs=94.5
Q ss_pred ehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhH
Q 020863 118 YSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGW 197 (320)
Q Consensus 118 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (320)
+.+.+..+.+.+.. ... .....+..+++.++.+++.||+|||+....+.....++...+.. . . .. +
T Consensus 238 ~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~--~--~-----~~--~ 303 (399)
T PRK05122 238 FITLYYAARGWDGA--ALA-LTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWL--A--P-----SP--W 303 (399)
T ss_pred HHHHHHHHcccccc--hHH-HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH--h--c-----cH--H
Confidence 44555555554321 222 22344456788899999999999998776555444443332221 1 1 11 1
Q ss_pred HHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHH
Q 020863 198 IAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAV 277 (320)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 277 (320)
..+....+.....+ ...+.......|.+|++.|+++.|+.+....++..+++.+...+.+..|+...+.+.+++.+++.
T Consensus 304 ~~~~~~~l~G~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 382 (399)
T PRK05122 304 MALIGAALTGFGFS-LVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGL 382 (399)
T ss_pred HHHHHHHHHHHhHH-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 11111111111111 12233334556889999999999999988888888888877777777888888887777777666
Q ss_pred HHHHhhcccCCCCCH
Q 020863 278 VFVILFVPETQGLTF 292 (320)
Q Consensus 278 ~~~~~~~pet~g~~~ 292 (320)
+... ++++.++++.
T Consensus 383 ~~~~-~~~~~~~~~~ 396 (399)
T PRK05122 383 ALTW-LLYRRAPRAV 396 (399)
T ss_pred HHHH-HhcccccccC
Confidence 5543 4555544433
No 64
>PRK10054 putative transporter; Provisional
Probab=99.31 E-value=9.5e-11 Score=105.17 Aligned_cols=159 Identities=12% Similarity=0.127 Sum_probs=100.8
Q ss_pred eeehHHHH-HHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcc
Q 020863 116 MYYSPTIV-QMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGV 194 (320)
Q Consensus 116 ~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (320)
..+.|.++ ++.|.+..+.+...+.. .....++.++.|+++||+|||+.+..+.....++...+.+. . ..
T Consensus 27 ~~~l~~~l~~~~g~s~~~~g~~~s~~-~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~--~-------~~ 96 (395)
T PRK10054 27 LPFMTIYLSRQYSLSVDLIGYAMTIA-LTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLV--N-------NV 96 (395)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHH--h-------HH
Confidence 33445444 56788766655554443 44467888999999999999998776665544443332221 1 00
Q ss_pred hhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Q 020863 195 YGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAV 274 (320)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 274 (320)
+..+++..+..... ....+....+.+|.+|++.|+++.|+.....+++..+++.+...+.. .++..+|.+.+.+.+
T Consensus 97 --~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~ 172 (395)
T PRK10054 97 --TLVVLFFALINCAY-SVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSA 172 (395)
T ss_pred --HHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHH
Confidence 11122221211111 12234456778899999999999999999999998888777665553 577778887776666
Q ss_pred HHHHHHHhhcccCC
Q 020863 275 LAVVFVILFVPETQ 288 (320)
Q Consensus 275 ~~~~~~~~~~pet~ 288 (320)
+..+...+++||++
T Consensus 173 i~~i~~~~~~~~~~ 186 (395)
T PRK10054 173 FPLVFIQIWVQRSE 186 (395)
T ss_pred HHHHHHHHHHhccc
Confidence 66555556666654
No 65
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.30 E-value=4.7e-10 Score=103.26 Aligned_cols=160 Identities=18% Similarity=0.110 Sum_probs=92.4
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHH
Q 020863 127 GFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALY 206 (320)
Q Consensus 127 g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (320)
+.+....+. ......+..+++.++.|+++||+|||+.+..+.....++........................++...++
T Consensus 51 ~~~~~~~~~-~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l 129 (479)
T PRK10077 51 SAANSLLGF-CVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRII 129 (479)
T ss_pred cCChhHHHH-HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHH
Confidence 444333333 3344455578999999999999999998877666554444333221000000000011111222333334
Q ss_pred HHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHH--------HHhcchhHHHHHHHHHHHHHH
Q 020863 207 IAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVA--------ELVGTGATFLILAGIAVLAVV 278 (320)
Q Consensus 207 ~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~--------~~~g~~~~~~~~~~~~~~~~~ 278 (320)
......+..+....+.+|.+|++.|+++.|+......++..+++.+...+. ...||...|.+.+...++..+
T Consensus 130 ~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~ 209 (479)
T PRK10077 130 GGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLM 209 (479)
T ss_pred HhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHH
Confidence 444444445666788999999999999999877766666665543322211 234677788776655555443
Q ss_pred HHHhhcccCC
Q 020863 279 FVILFVPETQ 288 (320)
Q Consensus 279 ~~~~~~pet~ 288 (320)
..+++||+.
T Consensus 210 -~~~~l~~s~ 218 (479)
T PRK10077 210 -LLYFVPETP 218 (479)
T ss_pred -HHHcCCCCc
Confidence 456789875
No 66
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.30 E-value=1.9e-10 Score=105.07 Aligned_cols=163 Identities=14% Similarity=0.104 Sum_probs=94.8
Q ss_pred eeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcch
Q 020863 116 MYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVY 195 (320)
Q Consensus 116 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (320)
.+..|.+.++ +.+..+.+.. .....+...++.+++|+++||+|||+++..+.....++.+..... .... ...
T Consensus 49 ~~~~p~l~~~-g~s~~~~g~~-~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~--~~~~---~~~- 120 (452)
T PRK11273 49 ALAMPYLVEQ-GFSRGDLGFA-LSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFV--PWAT---SSI- 120 (452)
T ss_pred HHhhHHHHHc-CCCHHHHHHH-HHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhh--hccc---ccH-
Confidence 3456776666 7776555444 344555578899999999999999998876665554444333221 1000 011
Q ss_pred hHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHH-HHHHHHhcchhHHHHHHHHHH
Q 020863 196 GWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTF-LTVAELVGTGATFLILAGIAV 274 (320)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~ 274 (320)
+..+....+...+.+ ...+.......|.+|++.|+++.|+.+....+++.+.+.+. .......||...|++.+.+.+
T Consensus 121 -~~~~~~~~l~gi~~g-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~ 198 (452)
T PRK11273 121 -AVMFVLLFLCGWFQG-MGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAI 198 (452)
T ss_pred -HHHHHHHHHHHHHHh-ccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 111111111112211 22233335667999999999999987777766654333322 222233477778887777666
Q ss_pred HHHHHHHhhcccCC
Q 020863 275 LAVVFVILFVPETQ 288 (320)
Q Consensus 275 ~~~~~~~~~~pet~ 288 (320)
+..++..+++||+.
T Consensus 199 ~~~~l~~~~~~~~~ 212 (452)
T PRK11273 199 LVALFAFAMMRDTP 212 (452)
T ss_pred HHHHHHHHHccCCH
Confidence 66566667777764
No 67
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.30 E-value=2.8e-10 Score=105.43 Aligned_cols=145 Identities=20% Similarity=0.113 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhcccc
Q 020863 136 LLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMG 215 (320)
Q Consensus 136 ~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (320)
.......+..+++.++.|+++||+|||+.+..+.....++.+..... . .. ........++...+...+...+..
T Consensus 60 ~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~--~-~~---~~~~~~~~~~~~r~l~G~~~g~~~ 133 (502)
T TIGR00887 60 AVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLS--P-GS---SPKSVMATLCFWRFWLGVGIGGDY 133 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc--c-Cc---ccchHHHHHHHHHHHHHHHHhhhh
Confidence 34445556678999999999999999998876655555544433221 1 10 010011122222223333333345
Q ss_pred ccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHH-----------------------HhcchhHHHHHHHH
Q 020863 216 PVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAE-----------------------LVGTGATFLILAGI 272 (320)
Q Consensus 216 ~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~-----------------------~~g~~~~~~~~~~~ 272 (320)
+....+.+|.+|++.|+++.++......++..+++.+...+.. ..+|...+.+.+..
T Consensus 134 ~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip 213 (502)
T TIGR00887 134 PLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVP 213 (502)
T ss_pred HHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHH
Confidence 6667899999999999999999888888877776655443321 12466666544443
Q ss_pred HHHHHHHHHhhcccC
Q 020863 273 AVLAVVFVILFVPET 287 (320)
Q Consensus 273 ~~~~~~~~~~~~pet 287 (320)
.++ .++..+++||+
T Consensus 214 ~~i-~~~~~~~lpES 227 (502)
T TIGR00887 214 ALL-ALYFRLTIPET 227 (502)
T ss_pred HHH-HHHHHHhCCCC
Confidence 333 33445778998
No 68
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.29 E-value=6.2e-10 Score=100.15 Aligned_cols=181 Identities=15% Similarity=0.131 Sum_probs=103.4
Q ss_pred hhccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHH
Q 020863 86 DVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLA 165 (320)
Q Consensus 86 ~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~ 165 (320)
+++++|+.+...+... .+..+.+....+.|.++++.|.+..+...... .....+.++.++.|+++||+|||+..
T Consensus 217 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~-~~~~~~~ig~~~~g~l~dr~~~~~~~ 290 (402)
T TIGR00897 217 ILFTNPNVLLGGMVRI-----INTIGLFGFAVFLPMFVAELGFSTSEWLQIWG-TFFFTNIVFNVIFGIVGDKLGWMNTV 290 (402)
T ss_pred HHHcChhHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHcCCChhHHHHHHH-HHHHHHHHHHHHHHHHHHhhcchhHH
Confidence 4566776654433211 11122333445678888888887655443333 34455789999999999999988865
Q ss_pred H-HHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHH
Q 020863 166 L-SSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWI 244 (320)
Q Consensus 166 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~ 244 (320)
. .+.....++...+........ +.. +...+...+..... .+..+. ....+|..| +.|+++.|+.+....+
T Consensus 291 ~~~~~l~~~~~~~~l~~~~~~~~----~~~--~~~~~~~~~~G~~~-~~~~~~-~~~~~~~~~-~~~g~~~g~~~~~~~l 361 (402)
T TIGR00897 291 RWFGGVGCGIFTLALYYIPQHFG----HSF--AVALIIAIALGIFL-AGYVPL-AAVFPTLAP-KHKGAAMSVLNLSAGL 361 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHccC----CcH--HHHHHHHHHHHHHH-HHHHHH-HHHHHhhCc-chhHHHHHHHHHHHHH
Confidence 3 222222222222111111000 011 11111111111111 112222 234567766 5799999999999999
Q ss_pred HHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHH
Q 020863 245 SNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVI 281 (320)
Q Consensus 245 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 281 (320)
++.+++.+...+.+..|+...+.+.+++.+++.+...
T Consensus 362 g~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~ 398 (402)
T TIGR00897 362 SAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTA 398 (402)
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHH
Confidence 9999999888888888877788877777666655443
No 69
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.28 E-value=9e-11 Score=104.10 Aligned_cols=158 Identities=13% Similarity=0.113 Sum_probs=103.9
Q ss_pred eehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchh
Q 020863 117 YYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 196 (320)
Q Consensus 117 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (320)
...|.+.++.+.+..+.+...+ .......++.+..|+++||+|||++..........+.. ...... .
T Consensus 12 ~~lp~i~~~~~~s~~~~g~~~s-~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~----~~~~~~-----~--- 78 (368)
T TIGR00903 12 PVLSLVAEDIDVSKEELGLLAI-TYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAG----RLLDPF-----N--- 78 (368)
T ss_pred hhHHHHHHHhCcCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH----HHHHhc-----c---
Confidence 4568888899987766555444 44445778899999999999999876543322222111 111101 0
Q ss_pred HHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHH
Q 020863 197 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLA 276 (320)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 276 (320)
...++...+... .+.+.........+|.+|++.|+++.|+......++..+++.....+.+..||...|.+.+.+.++.
T Consensus 79 ~~~l~~~R~l~G-~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~ 157 (368)
T TIGR00903 79 YEWLLACQLLAA-LGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAG 157 (368)
T ss_pred HHHHHHHHHHHH-hHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHH
Confidence 111222222111 1122223334555899999999999999999888999988887777777789998988878877777
Q ss_pred HHHHHhhcccCC
Q 020863 277 VVFVILFVPETQ 288 (320)
Q Consensus 277 ~~~~~~~~pet~ 288 (320)
.++.++++||+.
T Consensus 158 ~~~~~~~lp~~p 169 (368)
T TIGR00903 158 IILVLAALPALP 169 (368)
T ss_pred HHHHHHHcCCCC
Confidence 777777888864
No 70
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.28 E-value=2.9e-11 Score=111.42 Aligned_cols=165 Identities=19% Similarity=0.189 Sum_probs=111.2
Q ss_pred ceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCC
Q 020863 113 NTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSS 192 (320)
Q Consensus 113 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (320)
.......|.+.++.|.+..+.++.. ........++.++.|+++||+|||+.+..+.....++....... +
T Consensus 19 ~~~~~~~p~~~~~~g~s~~~~~~~~-~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~----~----- 88 (485)
T TIGR00711 19 TIVNVAIPTIAGDLGSSLSQVQWVI-TSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVA----P----- 88 (485)
T ss_pred HHHHHHHHHHHHhcCCChhhhhHHH-HHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCc----C-----
Confidence 3344567888888888766655544 44555678999999999999999998876665554444332211 1
Q ss_pred cchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHH
Q 020863 193 GVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGI 272 (320)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 272 (320)
. ...++...+..........+....+..|.+|++.|+++.|+......++..+++.+...+.+..+|.+.|++.+.+
T Consensus 89 ~---~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~ 165 (485)
T TIGR00711 89 N---LELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPI 165 (485)
T ss_pred C---HHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHH
Confidence 1 1112222222333333344556788899999999999999988888888888887777777777888888877666
Q ss_pred HHHHHHHHHhhcccCCCC
Q 020863 273 AVLAVVFVILFVPETQGL 290 (320)
Q Consensus 273 ~~~~~~~~~~~~pet~g~ 290 (320)
.++..++..++.||++.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~ 183 (485)
T TIGR00711 166 GIIVVVVAFFILPRDKPA 183 (485)
T ss_pred HHHHHHHHHHHcCCcccc
Confidence 666666666667775443
No 71
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.27 E-value=2.9e-11 Score=107.29 Aligned_cols=161 Identities=16% Similarity=0.187 Sum_probs=105.9
Q ss_pred eeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcc
Q 020863 115 VMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGV 194 (320)
Q Consensus 115 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (320)
.....|.+.++.|.+..+.+...+ ...+...++.++.|+++||+|||+.+..+.....++.+...... .
T Consensus 14 ~~~~~~~~~~~~g~s~~~~g~~~~-~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~---------~- 82 (379)
T TIGR00881 14 FALAMPYLVEEIGLSKTDLGLLLS-SFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST---------S- 82 (379)
T ss_pred hhhhhHHHHHHhCCCHhHHHHHHH-HHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh---------h-
Confidence 344567888888887766554444 44555788999999999999999988777665555544433221 0
Q ss_pred hhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHH-HHHHHHHHhcchhHHHHHHHHH
Q 020863 195 YGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQ-TFLTVAELVGTGATFLILAGIA 273 (320)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~ 273 (320)
. + .+....+..........+....+.+|.+|++.|+++.|+......++..+++. ....+....++...|.+.+.+.
T Consensus 83 ~-~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (379)
T TIGR00881 83 L-W-VMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIA 160 (379)
T ss_pred H-H-HHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHH
Confidence 0 1 11222222222233334566778899999999999999888888888888773 4344445567777777777666
Q ss_pred HHHHHHHHhhcccCC
Q 020863 274 VLAVVFVILFVPETQ 288 (320)
Q Consensus 274 ~~~~~~~~~~~pet~ 288 (320)
++..+..+++.||++
T Consensus 161 ~~~~~~~~~~~~~~~ 175 (379)
T TIGR00881 161 IIVSLICFLLLRDSP 175 (379)
T ss_pred HHHHHHHheeeCCCc
Confidence 666565666677654
No 72
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.25 E-value=9.2e-11 Score=103.71 Aligned_cols=125 Identities=10% Similarity=0.037 Sum_probs=67.9
Q ss_pred eehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchh
Q 020863 117 YYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 196 (320)
Q Consensus 117 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (320)
.+.|.++++.|.+..+.............+++.+++++++||+|||+.+..+.....+......+...............
T Consensus 230 ~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (356)
T TIGR00901 230 VLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHL 309 (356)
T ss_pred HHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchH
Confidence 44566666677765554443433333446789999999999999988876555444443332222110100000000001
Q ss_pred HHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHH
Q 020863 197 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVN 242 (320)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~ 242 (320)
+....+..+ ..+......+....+..|.+|++.|++..|+.+...
T Consensus 310 ~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~ 354 (356)
T TIGR00901 310 LMLFLTITL-EAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLS 354 (356)
T ss_pred HHHHHHHHH-HHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHH
Confidence 111222211 112222234555688899999999999999876644
No 73
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.25 E-value=1.1e-09 Score=97.79 Aligned_cols=129 Identities=19% Similarity=0.268 Sum_probs=70.4
Q ss_pred eehHHHHH-HhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcch
Q 020863 117 YYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVY 195 (320)
Q Consensus 117 ~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (320)
.+.|.+++ ..+.+...... ......+...++.++.+++.||+|||+....+.....++...+........ ..
T Consensus 227 ~~~~~~~~~~~g~~~~~~g~-~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-- 299 (385)
T TIGR00710 227 SGAPFVYIDIMGVSPSVFGL-LFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGL----GS-- 299 (385)
T ss_pred HcChHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcc----ch--
Confidence 34565554 56766544433 344455567889999999999999998876654444444333322211110 00
Q ss_pred hHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHH
Q 020863 196 GWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFL 254 (320)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~ 254 (320)
.........+.........+....+..|.+| +.|+++.++.+.....++.+.+....
T Consensus 300 -~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 300 -WAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111111111112223444566678887 46888999888777665555555444
No 74
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.25 E-value=1.6e-10 Score=106.71 Aligned_cols=164 Identities=18% Similarity=0.123 Sum_probs=108.6
Q ss_pred ceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCC
Q 020863 113 NTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSS 192 (320)
Q Consensus 113 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (320)
..+..-.|.+.++++.+..+..+..+. ......++.+..|+++||+|||+.+..+.....++.+..... +
T Consensus 23 tiv~~a~p~i~~~l~~s~~~~~~~~~~-~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a----~----- 92 (495)
T PRK14995 23 TVLHVAAPTLSMTLGASGNELLWIIDI-YSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFS----P----- 92 (495)
T ss_pred HHHHHHHHHHHHHhCCCHhHHHHHHHH-HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHc----C-----
Confidence 334455788888888876666555544 444466778899999999999999887766555554443221 1
Q ss_pred cchhHHHHHHHHHHHHHHhccccccchhcccccC-CccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHH
Q 020863 193 GVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVY-PEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAG 271 (320)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Elf-P~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 271 (320)
.. + .++....+......+..+.......+.+ |++.|+++.|+......++..+++.+-..+.+..||.+.|++...
T Consensus 93 ~~--~-~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~ 169 (495)
T PRK14995 93 TA--S-WLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVP 169 (495)
T ss_pred CH--H-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHH
Confidence 11 1 1122222222222222333334444554 778999999999999999999998888888888889989888777
Q ss_pred HHHHHHHHHHhhcccCCC
Q 020863 272 IAVLAVVFVILFVPETQG 289 (320)
Q Consensus 272 ~~~~~~~~~~~~~pet~g 289 (320)
+.++..++..+++||.++
T Consensus 170 ~~~~~~~l~~~~l~~~~~ 187 (495)
T PRK14995 170 IVLVVMGLTARYVPRQAG 187 (495)
T ss_pred HHHHHHHHHHHhCCCCCC
Confidence 766666666677787543
No 75
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.25 E-value=3.8e-10 Score=102.76 Aligned_cols=155 Identities=15% Similarity=0.080 Sum_probs=99.1
Q ss_pred CcceeeeehHHHHHH-hCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cchHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 020863 111 GINTVMYYSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHF-GRKKLALSSLAGVIISLVLLSWAFISGSS 188 (320)
Q Consensus 111 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~-grR~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (320)
+++.+..++|.++++ .|.+..+... ......+...++.+++|+++||+ |||+.+..+.....++...+.. .. .
T Consensus 24 s~Yg~~~~L~~yL~~~lgls~~~a~~-i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~--~~--~ 98 (493)
T PRK15462 24 SFYGMRALLILYLTNQLKYDDNHAYE-LFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGA--SE--I 98 (493)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHH--hh--c
Confidence 445555667776654 5776554433 34444455678899999999998 9999887776665555433221 00 0
Q ss_pred CCCCcchhHHHHHHHHHHHHHHhccc-cccchhcccccCCcc--chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhH
Q 020863 189 ASSSGVYGWIAVIGLALYIAFFAPGM-GPVPWTLNSEVYPEQ--YRGICGGMSATVNWISNLIVAQTFLTVAELVGTGAT 265 (320)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ElfP~~--~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 265 (320)
... . ...+..+.. .+.|. .+....+.+|+||++ .|.++.++....+++++.+++.+.+.+.+..||+..
T Consensus 99 ---~~~--~-~~l~l~li~--iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~ 170 (493)
T PRK15462 99 ---HPS--F-LYLSLAIIV--CGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMG 170 (493)
T ss_pred ---chh--H-HHHHHHHHH--HhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHH
Confidence 000 1 111111111 11222 233457889999986 799999999999999999999999988888888888
Q ss_pred HHHHHHHHHHHHH
Q 020863 266 FLILAGIAVLAVV 278 (320)
Q Consensus 266 ~~~~~~~~~~~~~ 278 (320)
|.+.+..++++.+
T Consensus 171 F~iaaigm~l~li 183 (493)
T PRK15462 171 FGLAAVGMIAGLV 183 (493)
T ss_pred HHHHHHHHHHHHH
Confidence 8776554444443
No 76
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.25 E-value=3.1e-10 Score=102.87 Aligned_cols=145 Identities=22% Similarity=0.189 Sum_probs=94.7
Q ss_pred ceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCC
Q 020863 113 NTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSS 192 (320)
Q Consensus 113 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (320)
....+..|.+.++.+.+..+.....+ ...+...++.++.|+++||+|||+.+..+.....++........
T Consensus 35 ~~~~~~~~~i~~~~~~s~~~~~~~~~-~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~--------- 104 (426)
T PRK12307 35 MLIFYIMYLIKADLGLTDMEGAFLAT-AAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLAS--------- 104 (426)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHh---------
Confidence 33445567777888887665544443 44555788999999999999999998877666555544433221
Q ss_pred cchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Q 020863 193 GVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILA 270 (320)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 270 (320)
. ...+....+.......+..+....+..|.+|++.|+++.|+......++..+++.+.+.+.+..+|...|.+.+
T Consensus 105 ~---~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~ 179 (426)
T PRK12307 105 G---VIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGL 179 (426)
T ss_pred H---HHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHH
Confidence 0 11111122222222223344556778899999999999999888777888887777666666677877776543
No 77
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.25 E-value=1e-09 Score=98.84 Aligned_cols=160 Identities=24% Similarity=0.226 Sum_probs=101.3
Q ss_pred eeeehHHHHHHhCCCCcHH----HHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCC
Q 020863 115 VMYYSPTIVQMAGFQSNQL----ALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSAS 190 (320)
Q Consensus 115 ~~~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (320)
...+.|.+.++.|.+..+. .............++.++.|+++||+|||+.+..+.....++....... .
T Consensus 33 ~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~----~--- 105 (408)
T PRK09874 33 VMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLA----Q--- 105 (408)
T ss_pred hhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHH----h---
Confidence 3446778888888765432 1223334444567888999999999999998876655444443332211 0
Q ss_pred CCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Q 020863 191 SSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILA 270 (320)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 270 (320)
. + +..++...+.. . ..+..+....+..|.+|++.|+++.|+......++..+++.+...+.+..++...|.+.+
T Consensus 106 --~-~-~~~~~~~~~~g-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~ 179 (408)
T PRK09874 106 --N-I-WQFLILRALLG-L-LGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITA 179 (408)
T ss_pred --h-H-HHHHHHHHHHH-H-hhhhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 0 1 11111111111 1 112334444567789999999999999888888888888877777777778888888777
Q ss_pred HHHHHHHHHHHhhcccC
Q 020863 271 GIAVLAVVFVILFVPET 287 (320)
Q Consensus 271 ~~~~~~~~~~~~~~pet 287 (320)
.+.++..+...++.||.
T Consensus 180 ~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 180 SVLFLCFLVTLFCIREN 196 (408)
T ss_pred HHHHHHHHHHHHHhccC
Confidence 77666666566666665
No 78
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.24 E-value=1.9e-10 Score=104.70 Aligned_cols=162 Identities=17% Similarity=0.100 Sum_probs=97.4
Q ss_pred eehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchh
Q 020863 117 YYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 196 (320)
Q Consensus 117 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (320)
+..|.+.+ .|.+..+.+... ........++.++.|+++||+|||+.+..+.....++....... . .. ... .
T Consensus 48 ~~~p~~~~-~g~s~~~~g~~~-~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~--~~-~~~-~- 118 (438)
T TIGR00712 48 LAMPYLVE-QGFSKGELGFAL-SAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFV--P--WA-TSS-I- 118 (438)
T ss_pred hhhHHHHH-cCCCHhHhHHHH-HHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhcc--c--cc-cch-H-
Confidence 44565554 577766554443 34455578899999999999999997776554444443332211 0 00 001 1
Q ss_pred HHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHH-HHhcchhHHHHHHHHHHH
Q 020863 197 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVA-ELVGTGATFLILAGIAVL 275 (320)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~ 275 (320)
....+...+.....+ ...+.......|.+|++.|+++.|+.+....+++.+++.+..... ...+|...|++.+.+.++
T Consensus 119 ~~l~~~~~l~g~~~g-~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i 197 (438)
T TIGR00712 119 AIMFVLLFLNGWFQG-MGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAII 197 (438)
T ss_pred HHHHHHHHHHHHHhh-cchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 111111111111111 122333456679999999999999988888888777766554433 345788888887777776
Q ss_pred HHHHHHhhcccCC
Q 020863 276 AVVFVILFVPETQ 288 (320)
Q Consensus 276 ~~~~~~~~~pet~ 288 (320)
..+..++++||+.
T Consensus 198 ~~~~~~~~~~~~~ 210 (438)
T TIGR00712 198 VALFAFAMMRDTP 210 (438)
T ss_pred HHHHHHHhccCCH
Confidence 6666667777753
No 79
>PRK10504 putative transporter; Provisional
Probab=99.24 E-value=4.5e-10 Score=103.22 Aligned_cols=164 Identities=12% Similarity=0.110 Sum_probs=107.2
Q ss_pred CcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCC
Q 020863 111 GINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSAS 190 (320)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (320)
.........|.+.++.|.+..+.++.. ........++.++.|+++||+|||+....+.....++..... .. +
T Consensus 25 ~~~~~~~~~p~~~~~~g~s~~~~~~~~-~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~--~~--~--- 96 (471)
T PRK10504 25 DTTIVNTALPSMAQSLGESPLHMHMVI-VSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCA--LS--G--- 96 (471)
T ss_pred hHHHHHHHHHHHHHHhCcCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHH--Hh--C---
Confidence 333445567889999998766544443 344555678899999999999999987766544444333221 11 1
Q ss_pred CCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Q 020863 191 SSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILA 270 (320)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 270 (320)
.. + .++...++.........+....+..|.+|++.|+++.|+......++..+++.+...+.+..||...|.+..
T Consensus 97 --~~--~-~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~ 171 (471)
T PRK10504 97 --TL--N-ELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINI 171 (471)
T ss_pred --CH--H-HHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHH
Confidence 11 1 111112222222222344556778899999999999999888888888888887777777778888888776
Q ss_pred HHHHHHHHHHHhhcccC
Q 020863 271 GIAVLAVVFVILFVPET 287 (320)
Q Consensus 271 ~~~~~~~~~~~~~~pet 287 (320)
....++.+......|+.
T Consensus 172 ~~~~l~~~~~~~~~~~~ 188 (471)
T PRK10504 172 PVGIIGAIATLMLMPNY 188 (471)
T ss_pred HHHHHHHHHHHHhCCCc
Confidence 66666666555666654
No 80
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.24 E-value=1.4e-09 Score=100.56 Aligned_cols=157 Identities=14% Similarity=0.081 Sum_probs=86.6
Q ss_pred hhhccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHH-hCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchH
Q 020863 85 LDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKK 163 (320)
Q Consensus 85 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~ 163 (320)
.++|+++..+...+..... ........++.|.+++. .|.+..+ +.....+......++.+++|+++||+|||+
T Consensus 253 ~~lf~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~lq~v~g~s~~~-ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~ 326 (495)
T PRK14995 253 MRLFTHRIILSGVVMAMTA-----MITLVGFELLMAQELQFVHGLSPLE-AGMFMLPVMVASGFSGPIAGILVSRLGLRL 326 (495)
T ss_pred HHHhCCcccHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHcCchH
Confidence 4677777665443332211 11222333566766665 5665544 455556666777889999999999999998
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHH
Q 020863 164 LALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNW 243 (320)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~ 243 (320)
....+.....++...+.. ..... +. +.......+.....+. ..+.......+..|++.++.+.++.+....
T Consensus 327 ~~~~g~~~~~~~~~~l~~--~~~~~---~~---~~~~~~~~l~G~g~g~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 397 (495)
T PRK14995 327 VATGGMALSALSFYGLAM--TDFST---QQ---WQAWGLMALLGFSAAS-ALLASTSAIMAAAPPEKAAAAGAIETMAYE 397 (495)
T ss_pred HHHHHHHHHHHHHHHHHH--hcCCC---ch---HHHHHHHHHHHHhHHH-HHHHHHHHHHhcCCHHhcchHHHHHHHHHH
Confidence 876655544444333221 11111 11 1111111111111111 122233455677899999999999888877
Q ss_pred HHHHHHHHHHHHH
Q 020863 244 ISNLIVAQTFLTV 256 (320)
Q Consensus 244 ~~~~~~~~~~~~~ 256 (320)
+++.+++.+...+
T Consensus 398 lG~~~G~ai~g~i 410 (495)
T PRK14995 398 LGAGLGIAIFGLL 410 (495)
T ss_pred HHHHHHHHHHHHH
Confidence 7777665544443
No 81
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.24 E-value=1.5e-09 Score=97.71 Aligned_cols=207 Identities=21% Similarity=0.225 Sum_probs=103.7
Q ss_pred CchHHHHhhhhHHHHHHHHH-hhcCCCChHHHHhcCCHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHhccccchhhh
Q 020863 9 GTWRWMLGVSAVPAIIQFVL-MLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDV 87 (320)
Q Consensus 9 ~~WR~~f~i~~~~~l~~~~~-~~~lpESp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (320)
.+||+.|++.++..++.++. +..+||+++.. ++ ++.. + +. ..+.+++
T Consensus 164 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~----------------~--------~~----~~~~~~~ 211 (406)
T PRK15402 164 LPWRGMFVLFAALAALSFFGLWRAMPETAGRV---GE-KLSL----------------K--------EL----GRDYKLV 211 (406)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHhCCCCCccc---cc-cccH----------------H--------HH----HHHHHHH
Confidence 47999999988887766554 45678875321 00 0000 0 00 0012345
Q ss_pred ccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHH-HHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHH
Q 020863 88 FKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIV-QMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLAL 166 (320)
Q Consensus 88 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~ 166 (320)
+++|+.+...+.. .+.... ......+.|.++ +..+.+....... .........++.++.++++||+++|+...
T Consensus 212 ~~~~~~~~~~~~~-~~~~~~----~~~~~~~~p~~~~~~~g~~~~~~g~~-~~~~~~~~~~g~~~~g~l~~r~~~~~~~~ 285 (406)
T PRK15402 212 LKNRRFVAGALAL-GLVSLP----LLAWIALSPVILISGEQLSSYEYGLL-QVPVFGALIAGNLTLARLTSRRPLRSLIR 285 (406)
T ss_pred HcCcHHHHHHHHH-HHHHHH----HHHHHHHhHHHHHHHhCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 6666655433321 111111 111122345554 4567664443332 33334456788899999999999999876
Q ss_pred HHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHH
Q 020863 167 SSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISN 246 (320)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~ 246 (320)
.+.....++...+....... . .. ..+ ......++....... .+...... ...+++.|++..++.+....++.
T Consensus 286 ~~~~~~~~g~~~~~~~~~~~-~---~~-~~~-~~~~~~~~g~g~~~~-~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~ 357 (406)
T PRK15402 286 MGLWPMVAGLLLAALATVIS-S---HA-YLW-LTAGLSLYAFGIGLA-NAGLYRLT-LFSSDVSKGTVSAAMGMLSMLIF 357 (406)
T ss_pred HHHHHHHHHHHHHHHHHHcc-c---cc-HHH-HHHHHHHHHHHHHHH-hhhHHHHH-hhhccccccHHHHHHHHHHHHHH
Confidence 65544444443332221111 0 01 111 111122221111111 12222222 22244789999999988888888
Q ss_pred HHHHHHHHHHHHHhc
Q 020863 247 LIVAQTFLTVAELVG 261 (320)
Q Consensus 247 ~~~~~~~~~~~~~~g 261 (320)
.+++.+...+.+..+
T Consensus 358 ~~g~~~~~~l~~~~~ 372 (406)
T PRK15402 358 TVGIELSKHAYLGGG 372 (406)
T ss_pred HHHHHHHHhcccCCc
Confidence 888776666555444
No 82
>PRK03699 putative transporter; Provisional
Probab=99.23 E-value=3.3e-10 Score=101.66 Aligned_cols=158 Identities=13% Similarity=0.160 Sum_probs=92.5
Q ss_pred eeeehHHHHH-HhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCc
Q 020863 115 VMYYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSG 193 (320)
Q Consensus 115 ~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (320)
...|.|.+++ ..|.+..+...... .......++.+++++++||++||+.+........+....+ ...++ .
T Consensus 224 ~~~~~p~~l~~~~g~s~~~~~~~~~-~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~----~~~~~----~ 294 (394)
T PRK03699 224 FISWVPEYAQKKFGMSLEDAGNLVS-NFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLF----VNTDD----P 294 (394)
T ss_pred HHHHHHHHHHHHcCCChHHhhHHHH-HHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHH----HHcCC----c
Confidence 3456777775 55776555444333 3344578999999999999999988765443333222111 11111 1
Q ss_pred chhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHH
Q 020863 194 VYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIA 273 (320)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 273 (320)
. +.... ... ..+...+..+....+..|..|.+ +++..|.....+.+++.+++.+...+.+..|+...++..+++.
T Consensus 295 ~--~~~~~-~~~-~G~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~ 369 (394)
T PRK03699 295 S--HLLYA-ILG-LGFFSSAIYTTIITLGSQQTKVA-SPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLY 369 (394)
T ss_pred h--HHHHH-HHH-HHHHHHHHHHHHHHHHHHHccCC-CHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHH
Confidence 0 11111 111 11112223344445566776644 5667788888888999999999888888888777777666665
Q ss_pred HHHHHHHHhhcccC
Q 020863 274 VLAVVFVILFVPET 287 (320)
Q Consensus 274 ~~~~~~~~~~~pet 287 (320)
.++.+. ....+++
T Consensus 370 ~~~~~~-~~~~~~~ 382 (394)
T PRK03699 370 AVVFVM-CILLGFV 382 (394)
T ss_pred HHHHHH-HHHHHHH
Confidence 555443 3444443
No 83
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.23 E-value=2.7e-10 Score=101.47 Aligned_cols=159 Identities=22% Similarity=0.178 Sum_probs=107.2
Q ss_pred eehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchh
Q 020863 117 YYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 196 (320)
Q Consensus 117 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (320)
...|.+.++.|.+..+.+...+ .......++.++.|+++||+|||+.+..+.....++....... . . .
T Consensus 12 p~~~~~~~~~~~s~~~~~~~~~-~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~--~-------~-~- 79 (377)
T PRK11102 12 PALPVIAADFGVSAGSVQMTLS-AYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA--Q-------T-I- 79 (377)
T ss_pred ccHHHHHHHhCCCHHHHHHHHH-HHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHH--c-------c-H-
Confidence 4567788888887665554443 4445578899999999999999998877665555554443321 1 0 0
Q ss_pred HHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHH
Q 020863 197 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLA 276 (320)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 276 (320)
+...+. .+..........+....+.+|.+|++.|++..|+......++..+++.+...+.+..++...|.+.+.+.++.
T Consensus 80 ~~~~~~-~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 158 (377)
T PRK11102 80 DQLIYM-RFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILA 158 (377)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHH
Confidence 111111 1122222222234445788899999999999999988888888888887777777778888888777777766
Q ss_pred HHHHHhhcccCC
Q 020863 277 VVFVILFVPETQ 288 (320)
Q Consensus 277 ~~~~~~~~pet~ 288 (320)
.+...++.||++
T Consensus 159 ~~~~~~~~~~~~ 170 (377)
T PRK11102 159 AALVFFFIPETL 170 (377)
T ss_pred HHHHHHhCCccC
Confidence 666666778764
No 84
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.23 E-value=5.7e-10 Score=100.44 Aligned_cols=131 Identities=18% Similarity=0.114 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhc
Q 020863 142 AGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTL 221 (320)
Q Consensus 142 ~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (320)
.+...++.+..|+++||+|||+.+..+.....+..+... .. +. . +...+...+. ........+....+
T Consensus 268 ~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~--~~--~~----~---~~~~~~~~~~-g~~~~~~~~~~~~~ 335 (408)
T PRK09874 268 GVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMS--FV--QT----P---LQLGILRFLL-GAADGALLPAVQTL 335 (408)
T ss_pred HHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHH--Hh--cc----H---HHHHHHHHHH-HhhhHhhHHHHHHH
Confidence 344567777889999999999987765544333332211 11 10 0 1111111111 11111122333345
Q ss_pred ccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhc
Q 020863 222 NSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFV 284 (320)
Q Consensus 222 ~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 284 (320)
..+..|.+.|++..|+.+....++..+++.+...+.+..|+...|.+.+++.+++.++.++..
T Consensus 336 ~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 336 LVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred HHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 567788999999999998888899989888888777777888888888877777766554433
No 85
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.22 E-value=4.7e-10 Score=102.71 Aligned_cols=148 Identities=18% Similarity=0.136 Sum_probs=88.8
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHH
Q 020863 130 SNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAF 209 (320)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (320)
..+.+. ..........++.++.|+++||+|||+.+..+.....++....... .. . ..+ +. ++...++...
T Consensus 70 ~~~~~~-~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~--~~-~----~~~-~~-~~~~r~l~G~ 139 (481)
T TIGR00879 70 SSLWGL-VVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLA--AF-A----LSV-EM-LIVGRVLLGI 139 (481)
T ss_pred hhHHHH-HHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHh--cc-c----cch-HH-HHHHHHHHHh
Confidence 344433 3444555578999999999999999998876665554444333211 11 0 000 11 1112222222
Q ss_pred HhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHH---HHHHHHhcchhHHHHHHHHHHHHHHHHHhhccc
Q 020863 210 FAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTF---LTVAELVGTGATFLILAGIAVLAVVFVILFVPE 286 (320)
Q Consensus 210 ~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pe 286 (320)
......+....+.+|.+|++.|+++.|+......++..+++.+. .......+|...|.+.+...++. ++..+++||
T Consensus 140 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~-~~~~~~l~~ 218 (481)
T TIGR00879 140 GVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLL-FLGLFFLPE 218 (481)
T ss_pred hhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHH-HHHHhcCCC
Confidence 22233455567889999999999999998888888887776655 22223456777777744444433 344567788
Q ss_pred CC
Q 020863 287 TQ 288 (320)
Q Consensus 287 t~ 288 (320)
+.
T Consensus 219 ~~ 220 (481)
T TIGR00879 219 SP 220 (481)
T ss_pred Ch
Confidence 63
No 86
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.22 E-value=1e-09 Score=98.43 Aligned_cols=160 Identities=15% Similarity=0.127 Sum_probs=98.8
Q ss_pred ehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhH
Q 020863 118 YSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGW 197 (320)
Q Consensus 118 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (320)
..|.+.++.+.+..+.....+ .......++.++.|+++||+|||+.+..+.....++....... . . + +
T Consensus 30 ~~~~i~~~~~~s~~~~~~~~~-~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~----~-----~-~-~ 97 (394)
T PRK11652 30 AIADMARDLNVREGAVQAVMA-AYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFA----H-----S-L-T 97 (394)
T ss_pred cHHHHHHHhCCCHHHHHHHHH-HHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH----c-----c-H-H
Confidence 357788888888766555444 4455578889999999999999998876655544444332211 1 0 0 1
Q ss_pred HHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHH
Q 020863 198 IAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAV 277 (320)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 277 (320)
.+....++.........+....+..|.+|.+.|+...+..+....++..+++.+...+.+..||...|.+.+.+.++..
T Consensus 98 -~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~ 176 (394)
T PRK11652 98 -VLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVT 176 (394)
T ss_pred -HHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHH
Confidence 1111111111111111234445677889988888888877666666666776666666666788888877666655555
Q ss_pred HHHHhhcccCCCC
Q 020863 278 VFVILFVPETQGL 290 (320)
Q Consensus 278 ~~~~~~~pet~g~ 290 (320)
+...++.||++..
T Consensus 177 ~~~~~~~~~~~~~ 189 (394)
T PRK11652 177 FSMARWMPETRPA 189 (394)
T ss_pred HHHHHhCCccCcc
Confidence 5455667886543
No 87
>PRK12382 putative transporter; Provisional
Probab=99.21 E-value=1.2e-09 Score=97.96 Aligned_cols=152 Identities=24% Similarity=0.203 Sum_probs=95.1
Q ss_pred eehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchh
Q 020863 117 YYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 196 (320)
Q Consensus 117 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (320)
.+.|.++++.+.+.. ............++.++.|++.||+|||+....+.....++...+.. .. ..
T Consensus 237 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~----~~-----~~-- 302 (392)
T PRK12382 237 TFVSLYFASKGWAMA---GFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWL----AP-----TA-- 302 (392)
T ss_pred HHHHHHHHhcCCchh---HHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHH----cc-----cH--
Confidence 344555566555321 22233344445778899999999999998776555444443332211 11 11
Q ss_pred HHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHH
Q 020863 197 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLA 276 (320)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 276 (320)
+.......+.....+ ...+.......|.+|++.|+++.|+.+....+++.+++.....+.+..|+...|.+.+.+.+++
T Consensus 303 ~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~ 381 (392)
T PRK12382 303 WVALAGAALTGAGCS-LIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLG 381 (392)
T ss_pred HHHHHHHHHHHHHHH-hHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHH
Confidence 111222222211111 1223334566788999999999999999999999999998888888888888888888777777
Q ss_pred HHHHHhh
Q 020863 277 VVFVILF 283 (320)
Q Consensus 277 ~~~~~~~ 283 (320)
.+..+++
T Consensus 382 ~~~~~~~ 388 (392)
T PRK12382 382 IIVTILS 388 (392)
T ss_pred HHHHHhh
Confidence 6655444
No 88
>PRK11043 putative transporter; Provisional
Probab=99.21 E-value=1.2e-09 Score=98.35 Aligned_cols=200 Identities=13% Similarity=0.136 Sum_probs=104.8
Q ss_pred CchHHHHhhhhHHHHHHHHHhhcCCCChHHHHhcCCHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHhccccchhhhc
Q 020863 9 GTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVF 88 (320)
Q Consensus 9 ~~WR~~f~i~~~~~l~~~~~~~~lpESp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 88 (320)
.+||+.|++.++..++..+...+++|+++- .++++ +..++++++
T Consensus 157 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--------------------------------~~~~~~~~~ 200 (401)
T PRK11043 157 FGWQAIFATLFAITLLLILPTLRLKPSKKA----RKQSQ--------------------------------DALTFKQLL 200 (401)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHcCCCCCc----cccch--------------------------------HHHHHHHHH
Confidence 479999999988888776666666665421 00000 001233455
Q ss_pred cchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHH
Q 020863 89 KSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSS 168 (320)
Q Consensus 89 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~ 168 (320)
++++.+...+...... ..+.....+.|.+.++.|.+....+ ...........++.++++++.||+|+|+.....
T Consensus 201 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~p~~~~~~g~s~~~~g-~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~ 274 (401)
T PRK11043 201 KSKTYLGNVLIFAACS-----AAFFAWLTGSPFILEQMGYSPADIG-LSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWL 274 (401)
T ss_pred cChhHHHHHHHHHHHH-----HHHHHHHHHhHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 5565544332211111 0111122345777777777654433 333444455678888899999999999866544
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHH
Q 020863 169 LAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLI 248 (320)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~ 248 (320)
.....++...+........ ... +..++...+... ......+.......|..|. .|+++.|+.+..+..++..
T Consensus 275 ~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~~~~~~ 346 (401)
T PRK11043 275 LVLFAVSVIAIWLASLLSH----PSL--VPLLIPFCVMAA-ANGAIYPIVVAQALRPFPQ-ATGKAAALQNTLQLGLCFL 346 (401)
T ss_pred HHHHHHHHHHHHHHHHhcc----CcH--HHHHHHHHHHHH-HHHHHHHHHHHHHhhhCcc-cChHHHHHHHHHHHHHHHH
Confidence 4433333332221111111 011 111111111111 1112233334455566664 6999999999888777777
Q ss_pred HHHHHHHHHH
Q 020863 249 VAQTFLTVAE 258 (320)
Q Consensus 249 ~~~~~~~~~~ 258 (320)
++.....+.+
T Consensus 347 ~~~~~g~l~~ 356 (401)
T PRK11043 347 ASLLVSALIS 356 (401)
T ss_pred HHHHHHHccC
Confidence 7776665544
No 89
>PRK10504 putative transporter; Provisional
Probab=99.21 E-value=1.7e-09 Score=99.42 Aligned_cols=161 Identities=14% Similarity=0.163 Sum_probs=89.9
Q ss_pred hhccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHH-hCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHH
Q 020863 86 DVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKL 164 (320)
Q Consensus 86 ~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~ 164 (320)
++++++.++..+...... ..+.....++.|.+++. .|.+... ......+..+...++.++.+++.||+|||+.
T Consensus 256 ~l~~~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~g~~~~~-~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~ 329 (471)
T PRK10504 256 KLFRTRTFSLGLAGSFAG-----RIGSGMLPFMTPVFLQIGLGFSPFH-AGLMMIPMVLGSMGMKRIVVQVVNRFGYRRV 329 (471)
T ss_pred HHhcccchHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHcCchHH
Confidence 567777765543332211 11222333456777774 6665443 3344445555556667889999999999998
Q ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHH
Q 020863 165 ALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWI 244 (320)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~ 244 (320)
...+.....+....+... . .. ... +............... ..+....+..+..|++.|+.+.|+.+....+
T Consensus 330 ~~~~~~~~~~~~~~~~~~--~--~~--~~~--~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 400 (471)
T PRK10504 330 LVATTLGLALVSLLFMLV--A--LL--GWY--YLLPFVLFLQGMVNST-RFSSMNTLTLKDLPDNLASSGNSLLSMIMQL 400 (471)
T ss_pred HHHHHHHHHHHHHHHHhc--c--cc--ccH--HHHHHHHHHHHHHHHH-HHHHHHHHHHHcCCHHhccchHHHHHHHHHH
Confidence 776555444433322211 1 10 111 1111111111111111 1223346667889999999999999888888
Q ss_pred HHHHHHHHHHHHHHHhc
Q 020863 245 SNLIVAQTFLTVAELVG 261 (320)
Q Consensus 245 ~~~~~~~~~~~~~~~~g 261 (320)
+..+++.+...+.+..|
T Consensus 401 g~~ig~~i~g~ll~~~g 417 (471)
T PRK10504 401 SMSIGVTIAGLLLGLFG 417 (471)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 88888777766655444
No 90
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.21 E-value=1.4e-09 Score=95.11 Aligned_cols=156 Identities=21% Similarity=0.201 Sum_probs=117.4
Q ss_pred eehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchh
Q 020863 117 YYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 196 (320)
Q Consensus 117 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (320)
-.+|.+-++.+.+.....+..+. +.....++.++...+.||+.||++++.......++.+...+...
T Consensus 34 gLLp~iA~dl~vs~~~aG~lis~-yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~------------ 100 (394)
T COG2814 34 GLLPPIAADLGVSEGAAGQLITA-YALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPS------------ 100 (394)
T ss_pred hchHHHHHHcCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhcc------------
Confidence 45688999999987776665554 45557899999999999999999988777666666655443311
Q ss_pred HHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHH
Q 020863 197 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLA 276 (320)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 276 (320)
+..+...-+..........++...+..++.|++.|+++.|+...-..+...++..+-..+.+..||..+|...+.+.++.
T Consensus 101 f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~ 180 (394)
T COG2814 101 FAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLA 180 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 11122222222222223345667888999999999999999998888888888888778889999999999999999988
Q ss_pred HHHHHhhcc
Q 020863 277 VVFVILFVP 285 (320)
Q Consensus 277 ~~~~~~~~p 285 (320)
.+..+..+|
T Consensus 181 ~~~~~~~lP 189 (394)
T COG2814 181 LLLLWKLLP 189 (394)
T ss_pred HHHHHHhCC
Confidence 888888899
No 91
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.20 E-value=7.4e-10 Score=98.96 Aligned_cols=159 Identities=14% Similarity=0.084 Sum_probs=101.9
Q ss_pred eehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchh
Q 020863 117 YYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 196 (320)
Q Consensus 117 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (320)
...|.+.++.|.+....+...+ .......++.++.|+++||+|||+.+..+.....++.+..... + ..
T Consensus 24 ~~l~~~~~~~g~s~~~~g~~~s-~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~----~-----~~-- 91 (382)
T PRK10091 24 GVLTELAHDVGISIPAAGHMIS-YYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLS----S-----SY-- 91 (382)
T ss_pred hChHHHHHHcCCCHHHHhHHHH-HHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHh----C-----cH--
Confidence 3567788888887666554444 4455578999999999999999998877766555544433221 1 11
Q ss_pred HHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHH
Q 020863 197 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLA 276 (320)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 276 (320)
+...+ ..++.........+....+..|.+|++.|+++.|+......++..+++.+-..+.+..+|...|.+.+.+.++.
T Consensus 92 ~~l~~-~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~ 170 (382)
T PRK10091 92 LMLAI-GRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAV 170 (382)
T ss_pred HHHHH-HHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHH
Confidence 11111 11111111111123334567899999999988888777777777777666555566678888888877766665
Q ss_pred HHHHHhhcccCC
Q 020863 277 VVFVILFVPETQ 288 (320)
Q Consensus 277 ~~~~~~~~pet~ 288 (320)
.+..++++||.+
T Consensus 171 ~~~~~~~lp~~~ 182 (382)
T PRK10091 171 LASIYFWVPDIR 182 (382)
T ss_pred HHHHHHhCCCCC
Confidence 555566788864
No 92
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.20 E-value=9.6e-10 Score=98.57 Aligned_cols=131 Identities=19% Similarity=0.313 Sum_probs=66.8
Q ss_pred hHHHH-HHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhH
Q 020863 119 SPTIV-QMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGW 197 (320)
Q Consensus 119 ~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (320)
.|.+. ++.|.+....+. ......+...++.++.+++.||+|||+....+.....++...+...... .
T Consensus 226 ~~~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~-----------~ 293 (392)
T PRK10473 226 SPVLLMEQMGFSRGEYAI-IMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSH-----------A 293 (392)
T ss_pred CHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH-----------H
Confidence 35444 456776544333 3344455577889999999999999998776655444443333221100 1
Q ss_pred HHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH
Q 020863 198 IAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFL 267 (320)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 267 (320)
.......+....+..+.. .....++.|.+.|+ |.......++..+++.+.+.+....|+.....
T Consensus 294 ~~~~~~~l~~~g~~~~~~---~~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~ 357 (392)
T PRK10473 294 VSLFGITLICAGFSVGFG---VAMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLGISAWNM 357 (392)
T ss_pred HHHHHHHHHHHHHHHHhH---HHHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhccchhHH
Confidence 111111111111111111 13334566666553 33334444555666666666666666544333
No 93
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.20 E-value=8.3e-10 Score=97.51 Aligned_cols=155 Identities=15% Similarity=0.105 Sum_probs=97.3
Q ss_pred eehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchh
Q 020863 117 YYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 196 (320)
Q Consensus 117 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (320)
...|.+..+.+.+..+.+.. .........++.++.|+++||+|||+.+..+.....++............ .. .
T Consensus 20 ~~~~~~~~~~~~s~~~~g~~-~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~- 92 (365)
T TIGR00900 20 VALPLYVLAGTGSASVLSLA-ALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGG----LN-I- 92 (365)
T ss_pred HHHHHHHHHhhccHHHHHHH-HHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCC----Cc-H-
Confidence 34466677777765554443 33445557788999999999999999887665554444433332211110 01 1
Q ss_pred HHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHH
Q 020863 197 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLA 276 (320)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 276 (320)
+....... ..........+....+.+|.+|++.|++..|+......++..+++.+...+.+..|+...|.+.+...++.
T Consensus 93 ~~~~~~~~-l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~ 171 (365)
T TIGR00900 93 WQVYVLAG-ILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAIS 171 (365)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 11111111 11222222234556788999999999999999999999999888887777777778877777665555544
Q ss_pred HHH
Q 020863 277 VVF 279 (320)
Q Consensus 277 ~~~ 279 (320)
.+.
T Consensus 172 ~~~ 174 (365)
T TIGR00900 172 ALL 174 (365)
T ss_pred HHH
Confidence 443
No 94
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.19 E-value=8.4e-10 Score=95.75 Aligned_cols=187 Identities=20% Similarity=0.320 Sum_probs=112.8
Q ss_pred hhhhccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHH-HhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcch
Q 020863 84 YLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRK 162 (320)
Q Consensus 84 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR 162 (320)
.+.++++++.|...+.- +..+-+.-....+.|.+++ +.+.+..+...+. ......+.+.-+++|+++||+|.|
T Consensus 211 ~~~v~~~~~~W~lsllY-----~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a-~~f~~~g~l~Rp~GG~LsDR~Gg~ 284 (417)
T COG2223 211 LKAVFSNKDTWLLSLLY-----FATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIA-FLFPLIGALARPLGGWLSDRIGGR 284 (417)
T ss_pred HHHHhcCcchHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHH-HHHHHHHHHHHhccchhhhhccch
Confidence 34456667666654442 2222233334456676655 5677665544433 333444677788999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHH
Q 020863 163 KLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVN 242 (320)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~ 242 (320)
+........+.++...+....... .+.......+..+.....+...|.+ ..+.+++..||.+ -+.+.|+...++
T Consensus 285 rv~~~~f~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~l~l~~~~G~GnG-svfk~Ip~if~~~-~G~v~G~vga~G 358 (417)
T COG2223 285 RVTLAVFVGMALAAALLSLFLTGF----GHGGSFVVFVAVFLALFVFAGLGNG-SVFKMIPVIFPKE-TGAVTGIVGAIG 358 (417)
T ss_pred hHHHHHHHHHHHHHHHHHcccccc----ccCcchHHHHHHHHHHHHHhccCcc-hheeechHHHHhh-hhHHHHHHHHhc
Confidence 988777766666655544322111 0011111222222222223333333 4568888899876 455779988899
Q ss_pred HHHHHHHHHHHHHHHHHhc-chhHHHHHHHHHHHHHHHHHh
Q 020863 243 WISNLIVAQTFLTVAELVG-TGATFLILAGIAVLAVVFVIL 282 (320)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~ 282 (320)
.++++..+..+....+.+| +...|.++..+.+++.+..+.
T Consensus 359 ~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~ 399 (417)
T COG2223 359 GLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWA 399 (417)
T ss_pred cccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888888888888877 666777777777777665543
No 95
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.19 E-value=4e-10 Score=102.08 Aligned_cols=238 Identities=22% Similarity=0.284 Sum_probs=134.4
Q ss_pred CchHHHHhhhhHHHHHHHHHhh-cCCCChHHHHhcCCHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHH-hccccchhh
Q 020863 9 GTWRWMLGVSAVPAIIQFVLML-FMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELR-KKKTVRYLD 86 (320)
Q Consensus 9 ~~WR~~f~i~~~~~l~~~~~~~-~lpESp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 86 (320)
.+|+..|.+.++.+++..+++. +.-|+|.-...-.+ +|.+.+.+.+.++.. ++.+.++++
T Consensus 192 ~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~is~------------------~El~~I~~~k~~~~~~~~~~vP~~~ 253 (466)
T KOG2532|consen 192 LGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHPNISE------------------KELKYIEKGKSEAHVKKKPPVPYKA 253 (466)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCH------------------HHHHHHHhcccccccCCCCCCCHHH
Confidence 5799999999999999887764 56677754221111 122222222211111 113568999
Q ss_pred hccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHH-HhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHH-
Q 020863 87 VFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKL- 164 (320)
Q Consensus 87 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~- 164 (320)
+++++..|...+.. +....+.+.+..|.|++++ .++++..+.++..+++.. .+.+..+++|.++||+-+|.+
T Consensus 254 i~ts~~vwai~~~~-----f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l-~~~~~k~~~g~lsD~l~~~~ls 327 (466)
T KOG2532|consen 254 ILTSPPVWAIWISA-----FGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFL-AMAIVKFVAGQLSDRLTFRILS 327 (466)
T ss_pred HHcCHHHHHHHHHH-----HHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHH-HHHHHHHHHHHHHHHHhhccCc
Confidence 99998877655542 2223344455567787776 567877777776666654 489999999999999866311
Q ss_pred -----HHHHhHHHHH-HHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHH
Q 020863 165 -----ALSSLAGVII-SLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMS 238 (320)
Q Consensus 165 -----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~ 238 (320)
-....+.... +..++...+.. ..+. +..++++.+...+ .|..........-..-++.-+...|+.
T Consensus 328 ~t~~rkifn~i~~~~~ai~l~~l~~~~----~~~~---~~a~~~l~~~~~~--~g~~~~Gf~~~~~~~apq~a~~l~g~~ 398 (466)
T KOG2532|consen 328 ETTVRKIFNTIAFGGPAVFLLVLAFTS----DEHR---LLAVILLTIAIGL--SGFNISGFYKNHQDIAPQHAGFVMGII 398 (466)
T ss_pred hHhHHHHHHhHHHHHHHHHHHeeeecC----CCcc---hHHHHHHHHHHHH--cccchhhhHhhhhhccchHHHHHHHHH
Confidence 1111111111 11111111111 1111 1222222221111 122222212222221456678889999
Q ss_pred HHHHHHHHHHHHHHHHHHHH---HhcchhHHHHHHHHHHHHHHH
Q 020863 239 ATVNWISNLIVAQTFLTVAE---LVGTGATFLILAGIAVLAVVF 279 (320)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~ 279 (320)
+..+.+.+++++.+...+.. ...|...|++.+++.+++.++
T Consensus 399 ~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~ 442 (466)
T KOG2532|consen 399 NFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNII 442 (466)
T ss_pred HHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchh
Confidence 99999999988887776653 235778888888888777653
No 96
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.19 E-value=1.9e-09 Score=95.95 Aligned_cols=116 Identities=15% Similarity=0.234 Sum_probs=60.2
Q ss_pred ehHHH-HHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchh
Q 020863 118 YSPTI-VQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 196 (320)
Q Consensus 118 ~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (320)
+.|.+ .+..|.+..+.+. ......+..+++.++.+++.||+|||+....+.....+....+...... .. . .
T Consensus 216 ~~~~~~~~~~g~s~~~~g~-~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~--~ 287 (377)
T PRK11102 216 AGPFVYIELNGVSPQNFGY-YFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALL-DL----G--F 287 (377)
T ss_pred cCHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH-hh----h--H
Confidence 34444 4456776554433 3445555678889999999999999998776654433322222111100 00 0 0
Q ss_pred HHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHH
Q 020863 197 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNW 243 (320)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~ 243 (320)
+...++..++..... ........+..|..| +.|+++.++.+....
T Consensus 288 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~ 332 (377)
T PRK11102 288 WALVVGVAAFVGCVS-MISSNAMAVILDEFP-HMAGTASSLAGTLRF 332 (377)
T ss_pred HHHHHHHHHHHHHHH-HhhHHHHHHHhcccc-ccchHHHHHHHHHHH
Confidence 111222222222111 112222345567777 778888888766544
No 97
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.19 E-value=2.2e-09 Score=95.98 Aligned_cols=154 Identities=14% Similarity=0.120 Sum_probs=81.7
Q ss_pred hHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHH
Q 020863 119 SPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWI 198 (320)
Q Consensus 119 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (320)
.|.+.+..|.+....... .....+..+++.++.+++.||+|+|+....+.....++...+.. ... . . +.
T Consensus 223 ~~~~~~~~g~s~~~~~~~-~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~-~~~--~----~---~~ 291 (382)
T PRK10091 223 KPYMMFISGFSETSMTFI-MMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFF-FGG--M----K---TA 291 (382)
T ss_pred HHHHHHhcCCCHHHHHHH-HHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHH-HHh--h----H---HH
Confidence 444545567765554443 34455567899999999999999998876555444333322211 111 0 0 11
Q ss_pred HHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHH
Q 020863 199 AVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAEL-VGTGATFLILAGIAVLAV 277 (320)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~ 277 (320)
.++...+..........+.......+..|.+.++.+ ..+....+++.+++.....+.+. .++...+.+.+.++++..
T Consensus 292 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~ 369 (382)
T PRK10091 292 SLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAM 369 (382)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHH
Confidence 111111111111111111122334455555555443 34556678888888888877775 467677776665555555
Q ss_pred HHHHhhcc
Q 020863 278 VFVILFVP 285 (320)
Q Consensus 278 ~~~~~~~p 285 (320)
.....+.+
T Consensus 370 ~~~~~~~~ 377 (382)
T PRK10091 370 SSLLLYGR 377 (382)
T ss_pred HHHHHHhh
Confidence 44444433
No 98
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.18 E-value=2.4e-09 Score=93.88 Aligned_cols=155 Identities=27% Similarity=0.351 Sum_probs=104.0
Q ss_pred ceeeeehHHHHHHh-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchH-HHHHHhHHHHHHHHHHHHHHHhcCCCC
Q 020863 113 NTVMYYSPTIVQMA-GFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKK-LALSSLAGVIISLVLLSWAFISGSSAS 190 (320)
Q Consensus 113 ~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (320)
.....+.|.+.++. +.+..+ .............++.++.+++.||+|||+ ....+.....++....... .
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~----- 263 (352)
T cd06174 192 YGLLTYLPLYLQEVLGLSAAE-AGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALA--P----- 263 (352)
T ss_pred HHHHHHHHHHHHHhcCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh--c-----
Confidence 33445566666665 555444 344455556667899999999999999998 7766555444444333221 0
Q ss_pred CCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Q 020863 191 SSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILA 270 (320)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 270 (320)
. .+...+. ............+....+..|..|++.|++..|+.+...+++..+++.....+.+..++...+.+.+
T Consensus 264 --~--~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~ 338 (352)
T cd06174 264 --S--LALLLVA-LLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILA 338 (352)
T ss_pred --c--HHHHHHH-HHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHH
Confidence 0 1111222 2222233334456677888999999999999999999999999999998888887778878888877
Q ss_pred HHHHHHHHHH
Q 020863 271 GIAVLAVVFV 280 (320)
Q Consensus 271 ~~~~~~~~~~ 280 (320)
.+.+++.+..
T Consensus 339 ~~~~i~~i~~ 348 (352)
T cd06174 339 ALALLAALLL 348 (352)
T ss_pred HHHHHHHHHh
Confidence 7777666543
No 99
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.18 E-value=2.4e-09 Score=95.73 Aligned_cols=174 Identities=14% Similarity=0.041 Sum_probs=99.4
Q ss_pred hhhhccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchH
Q 020863 84 YLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKK 163 (320)
Q Consensus 84 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~ 163 (320)
..+++|+|+.+...+....... +......+.|.++++.|.+....+.... ...+..+++.++++++.||+|+|+
T Consensus 198 ~~~~l~~~~~~~~l~~~~l~~~-----~~~~~~~~~~~~l~~~g~s~~~~g~l~~-~~~~~~i~~~~~~~~l~~r~g~~~ 271 (382)
T TIGR00902 198 FIALLKNPMNLRFLAAVCLIQG-----AHAAYYGFSAIYWQAAGISASATGLLWG-IGVLAEIIIFAFSNKLFQNCSARD 271 (382)
T ss_pred HHHHHcChHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHCCCCHhHHHHHHH-HHHHHHHHHHHHhHHHHhhCCHHH
Confidence 4567788777665443322111 1222223456666778887665554433 455556778888999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHH-H
Q 020863 164 LALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATV-N 242 (320)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~-~ 242 (320)
++..+.....+....+... . .. +..+....+....++. ..+....+.++. |++.|+++.|+.+.. .
T Consensus 272 ~l~~~~~~~~~~~~~~~~~--~-------~~--~~~~~~q~l~g~~~~~-~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~ 338 (382)
T TIGR00902 272 LLLISAIACVGRWAIIGAI--E-------AF--PLIFLLQILHCGTFAV-CHLAAMRYIAAQ-PGSEIAKLQALYNALAM 338 (382)
T ss_pred HHHHHHHHHHHHHHHHHhH--h-------hH--HHHHHHHHHHHHHHHH-HHHHHHHHHHhC-CHhhHHHHHHHHHHHHH
Confidence 8876666555554433211 0 11 1111111121222221 122234566777 999999999987643 3
Q ss_pred HHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHH
Q 020863 243 WISNLIVAQTFLTVAELVGTGATFLILAGIAVLAV 277 (320)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 277 (320)
.++..+++.+-..+.+..|. ..|...+++.+++.
T Consensus 339 g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T TIGR00902 339 GGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAF 372 (382)
T ss_pred HHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 46666677777777777764 55666666665544
No 100
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.18 E-value=9.4e-10 Score=101.73 Aligned_cols=161 Identities=19% Similarity=0.163 Sum_probs=101.7
Q ss_pred eeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCc
Q 020863 114 TVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSG 193 (320)
Q Consensus 114 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (320)
......|.+.++.+.+..+.....+.. .....++.++.|+++||+|||+.+..+.....++.+...... +
T Consensus 38 ~~~~~~~~i~~~~~~s~~~~~~~~~~~-~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~----~----- 107 (496)
T PRK03893 38 LITLVLTEVQGEFGLTTVQAASLISAA-FISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAP----G----- 107 (496)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHh----H-----
Confidence 344456778888888766555544443 445778899999999999999988766555544444333210 0
Q ss_pred chhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHH
Q 020863 194 VYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIA 273 (320)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 273 (320)
...+....++..+...+..+....+..|.+|.+.|+++.|+......++..+++.+...+.+..+|...|.+.+...
T Consensus 108 ---~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~ 184 (496)
T PRK03893 108 ---YWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPI 184 (496)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Confidence 11112222222222223344556778899999999999999988888998888888777777777777766533322
Q ss_pred HHHHHHHHhhcccCC
Q 020863 274 VLAVVFVILFVPETQ 288 (320)
Q Consensus 274 ~~~~~~~~~~~pet~ 288 (320)
+ ..++.....||++
T Consensus 185 ~-~~~~~~~~~p~~~ 198 (496)
T PRK03893 185 I-FALWLRKNLPEAE 198 (496)
T ss_pred H-HHHHHHHhCCCch
Confidence 2 2233334566653
No 101
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.18 E-value=1e-09 Score=98.58 Aligned_cols=128 Identities=12% Similarity=0.036 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchh
Q 020863 141 VAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWT 220 (320)
Q Consensus 141 ~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (320)
..+...++.+..+++.||+|||+.+..+.....+...... ...+ . +...+...+....... .......
T Consensus 263 ~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~----~~~~-----~--~~~~~~~~l~g~~~~~-~~~~~~~ 330 (396)
T TIGR00882 263 GELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSS----FATT-----A--LEVVILKMLHAFEVPF-LLVGCFK 330 (396)
T ss_pred HHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHH----hcCC-----h--HHHHHHHHHHHHHHHH-HHHHHHH
Confidence 3444667788899999999999987665544333322211 1111 1 1111111111111110 1112334
Q ss_pred cccccCCccchhhhHHH-HHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHH
Q 020863 221 LNSEVYPEQYRGICGGM-SATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFV 280 (320)
Q Consensus 221 ~~~ElfP~~~R~~~~gi-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 280 (320)
+..+.+|++.|+++.++ .+....+++.+++.+...+.+..|+..+|.+.+.+.+++.+..
T Consensus 331 ~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 331 YITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred HHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 66788899999887766 4566778888888888888888888888888777766665543
No 102
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.17 E-value=3.6e-10 Score=99.38 Aligned_cols=160 Identities=23% Similarity=0.315 Sum_probs=103.9
Q ss_pred ehH-HHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchh
Q 020863 118 YSP-TIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 196 (320)
Q Consensus 118 ~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (320)
..| .+.++.|.+..+.+...+. ......++.++.|+++||+|||+.+..+.....++..... +. . ..
T Consensus 18 ~~~~~~~~~~~~s~~~~~~~~~~-~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~--~~--~-----~~-- 85 (352)
T PF07690_consen 18 ALPLYLAEELGLSPSQIGLLFSA-FFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLA--FA--S-----NF-- 85 (352)
T ss_dssp HHH-HHHCCSTTTSHCHHHHHHH-HHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHH--HH--C-----CH--
T ss_pred HHHHHHHHccCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhh--hh--h-----hH--
Confidence 345 5666778777666554444 4455789999999999999999988777666655533322 21 1 11
Q ss_pred HHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHH
Q 020863 197 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLA 276 (320)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 276 (320)
+ .+....+..........+....+.+|.+|++.|+++.|+......++..+++.+...+.+..++...|.+.+.+.++.
T Consensus 86 ~-~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~ 164 (352)
T PF07690_consen 86 W-LLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIA 164 (352)
T ss_dssp H-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHH
T ss_pred H-HHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhh
Confidence 1 122222222222223345566788999999999999999999999998888777776666667778888888887777
Q ss_pred HHHHHhhcccCCCC
Q 020863 277 VVFVILFVPETQGL 290 (320)
Q Consensus 277 ~~~~~~~~pet~g~ 290 (320)
.++...+.++++.+
T Consensus 165 ~il~~~~~~~~~~~ 178 (352)
T PF07690_consen 165 AILFILFLPEPPPP 178 (352)
T ss_dssp HHHHHCCC---STT
T ss_pred hhhHhhhhhhcccc
Confidence 66544555554433
No 103
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.16 E-value=1.5e-09 Score=99.25 Aligned_cols=158 Identities=16% Similarity=0.192 Sum_probs=99.4
Q ss_pred eeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCc
Q 020863 114 TVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSG 193 (320)
Q Consensus 114 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (320)
....+.|.+.+..|.+..+.+...+.. .....++.++.|+++||+|||+.++.+.....++.+..... . .
T Consensus 37 ~~~~~~~~i~~~~g~s~~~~~~~~s~~-~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~--~-------~ 106 (455)
T TIGR00892 37 AVTVFFKELQQIFQATYSETAWISSIM-LAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFS--S-------N 106 (455)
T ss_pred chhhhHHHHHHHhCcchhHHHHHHHHH-HHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHh--h-------h
Confidence 345567888888998766655554443 33456778889999999999998876655444443332221 1 0
Q ss_pred chhHHHHHHHHHHHHHHhccc-cccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHH
Q 020863 194 VYGWIAVIGLALYIAFFAPGM-GPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGI 272 (320)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 272 (320)
. +.......++.. ...+. .+....+..+.+| +.|+++.|+.+....++..+++.+...+.+..||..+|.+.+++
T Consensus 107 ~--~~l~~~~~~l~G-~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~ 182 (455)
T TIGR00892 107 V--IELYLTAGFITG-LGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGL 182 (455)
T ss_pred H--HHHHHHHHHHHH-hcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHH
Confidence 0 111111111111 11111 2333456678886 67999999999888888888888777777778898899888777
Q ss_pred HHHHHHHHHhhcc
Q 020863 273 AVLAVVFVILFVP 285 (320)
Q Consensus 273 ~~~~~~~~~~~~p 285 (320)
.++..+..++..|
T Consensus 183 ~~~~~v~~~~~~~ 195 (455)
T TIGR00892 183 LLHCCVCGALMRP 195 (455)
T ss_pred HHHHHHHHHHhCC
Confidence 6655554444444
No 104
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.16 E-value=1.4e-09 Score=96.11 Aligned_cols=132 Identities=11% Similarity=-0.013 Sum_probs=81.8
Q ss_pred eehHHHHHH-hCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcch
Q 020863 117 YYSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVY 195 (320)
Q Consensus 117 ~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (320)
.+.|.+.++ .+.+....+. ......+...++.++.+++.||++||+....+.....++...+... . . .
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~----~-- 300 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGW-VLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLT--P--P----N-- 300 (365)
T ss_pred HHhHHHHHHHhCCchHHHHH-HHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhh--c--h----h--
Confidence 345676665 5666544443 3444555578889999999999999987765544333333222211 1 0 0
Q ss_pred hHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 020863 196 GWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELV 260 (320)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~ 260 (320)
.+...+...+.. +......+....+..|.+|++.|+++.|+.+....++..+++.+...+.+..
T Consensus 301 ~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~ 364 (365)
T TIGR00900 301 FPLFLVLWFAIG-VGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHL 364 (365)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 111122222222 2222234455678889999999999999999999999988888777666543
No 105
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.16 E-value=9.6e-10 Score=83.04 Aligned_cols=132 Identities=25% Similarity=0.319 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhccc
Q 020863 144 TNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNS 223 (320)
Q Consensus 144 ~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (320)
...++.++.+++.||+|||+.+..+.....++....... . .. +.......+. ........+..+.+..
T Consensus 10 ~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~----~-----~~--~~~~~~~~~~-g~~~~~~~~~~~~~~~ 77 (141)
T TIGR00880 10 GQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS----S-----NI--TVLIIARFLQ-GFGAAFALVAGAALIA 77 (141)
T ss_pred HHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh----c-----cH--HHHHHHHHHH-HHHHHHHHHhHHHHHH
Confidence 356788899999999999998776555444443332211 1 10 1111111111 1111222345567889
Q ss_pred ccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhcccC
Q 020863 224 EVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPET 287 (320)
Q Consensus 224 ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet 287 (320)
|.+|++.|+++.|+.+....++..+++.....+.+..++...+.+.+.+.+++.+..+++.|||
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 78 DIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred HHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 9999999999999999999999999888887777767777777777777777766666666764
No 106
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.16 E-value=1.4e-09 Score=100.34 Aligned_cols=169 Identities=14% Similarity=0.130 Sum_probs=95.5
Q ss_pred eeeeehHHHHHHhCCCCcH-HHHHHH----HHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 020863 114 TVMYYSPTIVQMAGFQSNQ-LALLLS----LAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSS 188 (320)
Q Consensus 114 ~~~~~~~~~~~~~g~~~~~-~~~~~~----~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (320)
...+..|.+-+....+... ...... ........++.++.|+++||+|||+.+..+.....++.+...... +
T Consensus 34 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~----~ 109 (490)
T PRK10642 34 VYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIP----S 109 (490)
T ss_pred HHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcc----c
Confidence 3344556666665433222 111111 222344678899999999999999998877766666555443321 1
Q ss_pred CCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHH--------HHh
Q 020863 189 ASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVA--------ELV 260 (320)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~--------~~~ 260 (320)
......+....++..-+.......+..+....+.+|.+|++.|+...++......+|..+++.+...+. ...
T Consensus 110 ~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~ 189 (490)
T PRK10642 110 YATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDW 189 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCc
Confidence 000000111112333333444444445566788999999999999988877666566655554433222 135
Q ss_pred cchhHHHHHHHHHHHHHHHHHhhcccC
Q 020863 261 GTGATFLILAGIAVLAVVFVILFVPET 287 (320)
Q Consensus 261 g~~~~~~~~~~~~~~~~~~~~~~~pet 287 (320)
||...|++.+.+.+++ ++....+||+
T Consensus 190 gWR~~f~i~~~~~l~~-~~~~~~~~es 215 (490)
T PRK10642 190 GWRIPFFIALPLGIIG-LYLRHALEET 215 (490)
T ss_pred cHHHHHHHHHHHHHHH-HHHHHcCCCC
Confidence 7887887755444433 3334567886
No 107
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.15 E-value=1.4e-09 Score=99.85 Aligned_cols=151 Identities=14% Similarity=0.070 Sum_probs=98.1
Q ss_pred hCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHH
Q 020863 126 AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLAL 205 (320)
Q Consensus 126 ~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (320)
.+.+....+...+ .......++.+.+|+++||+|||+.+..+.....+.......... .. ...++...+
T Consensus 71 ~~~s~~~~g~~~s-~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~--~~--------~~~l~~~r~ 139 (465)
T TIGR00894 71 FKWSGALQGLILS-SHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAG--GG--------IALVVFCRV 139 (465)
T ss_pred CCCCHHHhhHHHH-HHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHH--cC--------chHHHHHHH
Confidence 4454444443333 344457888999999999999999887665544444333222211 00 111222333
Q ss_pred HHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHHHHHHhhc
Q 020863 206 YIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAEL-VGTGATFLILAGIAVLAVVFVILFV 284 (320)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~ 284 (320)
+.........+....+.+|.+|++.|+++.|+......++..+++.+...+.+. .||...|++.+...++..++.+.+.
T Consensus 140 ~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~ 219 (465)
T TIGR00894 140 IQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFP 219 (465)
T ss_pred HHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHh
Confidence 333444444556678889999999999999999998889998888887777776 4888888887776665555555555
Q ss_pred ccC
Q 020863 285 PET 287 (320)
Q Consensus 285 pet 287 (320)
||.
T Consensus 220 ~~~ 222 (465)
T TIGR00894 220 ADD 222 (465)
T ss_pred cCC
Confidence 543
No 108
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.15 E-value=2.9e-09 Score=96.73 Aligned_cols=173 Identities=17% Similarity=0.101 Sum_probs=93.3
Q ss_pred CcceeeeehHHHHHHhC---CCCcHHHH--HHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHh
Q 020863 111 GINTVMYYSPTIVQMAG---FQSNQLAL--LLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIS 185 (320)
Q Consensus 111 ~~~~~~~~~~~~~~~~g---~~~~~~~~--~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~ 185 (320)
....+.+..|.+.++.+ .+..+... .......+...++.+++|+++||+|||+.+..+.....++.......
T Consensus 37 d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~--- 113 (432)
T PRK10406 37 DFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACL--- 113 (432)
T ss_pred HHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhc---
Confidence 33334455666777664 22222111 11112223345888999999999999998877666555544433221
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHH--------
Q 020863 186 GSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVA-------- 257 (320)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~-------- 257 (320)
++...........++...+.......+..+....+.+|.+|++.|+...++.......+..+++.....+.
T Consensus 114 -~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 192 (432)
T PRK10406 114 -PGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAEL 192 (432)
T ss_pred -CCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 10000000111122333333333333445666789999999999999888765555555555444332222
Q ss_pred HHhcchhHHHHHHHHHHHHHHHHHhhcccCC
Q 020863 258 ELVGTGATFLILAGIAVLAVVFVILFVPETQ 288 (320)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~ 288 (320)
...||...|.+.+...++. .+....+||++
T Consensus 193 ~~~gWr~~F~i~~~~~ll~-~~~~~~~~e~~ 222 (432)
T PRK10406 193 REWGWRIPFALGAVLAVVA-LWLRRQLDETS 222 (432)
T ss_pred hccchHHHHHHHHHHHHHH-HHHHhcCCCCc
Confidence 1357888887655555443 23344567764
No 109
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.14 E-value=6.3e-09 Score=93.91 Aligned_cols=175 Identities=16% Similarity=0.161 Sum_probs=100.7
Q ss_pred HHHHH-HhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHH
Q 020863 120 PTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWI 198 (320)
Q Consensus 120 ~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (320)
+.+.+ +.+++..+.....+++. ....+..+..|++.||+|.|++...+.....+....+.+.. ... . +. +..
T Consensus 58 ~~~~~~~~~ls~~q~g~l~ai~~-l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~--~~~-~-~s-~~~- 130 (462)
T PRK15034 58 VNLNKIGFNFTTDQLFLLTALPS-VSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAV--QNP-N-TP-FGI- 130 (462)
T ss_pred HHhhhhhcCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHH--ccc-C-CC-HHH-
Confidence 34444 57887776665555444 44667777889999999999987766655444443332211 100 0 01 111
Q ss_pred HHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHH-----HH-------------h
Q 020863 199 AVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVA-----EL-------------V 260 (320)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~-----~~-------------~ 260 (320)
+....++.... .+..+......++.||++.||++.|+....++.+..++..+.|.+. .. .
T Consensus 131 -lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~ 208 (462)
T PRK15034 131 -FIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVM 208 (462)
T ss_pred -HHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchH
Confidence 11111111111 2233445577889999999999999998778888776666555433 11 1
Q ss_pred cchhHHHHHHHHHHHHHHHHHhhcccCC--CCCHHHHHHHHhccc
Q 020863 261 GTGATFLILAGIAVLAVVFVILFVPETQ--GLTFLEVEQMWKERA 303 (320)
Q Consensus 261 g~~~~~~~~~~~~~~~~~~~~~~~pet~--g~~~~~~~~~~~~~~ 303 (320)
++..++.++..+.++.+++.+++.++.+ +.+..|..+.++++.
T Consensus 209 ~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~~~~~~~~~~vlk~~~ 253 (462)
T PRK15034 209 SLANAAWIWVPLLAIATIAAWSGMNDIASSRASIADQLPVLQRLH 253 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCccccccCHHHHHHHhCCCc
Confidence 2344555666666666655555555533 345666666666543
No 110
>PRK03699 putative transporter; Provisional
Probab=99.14 E-value=7e-09 Score=93.08 Aligned_cols=151 Identities=9% Similarity=0.061 Sum_probs=92.8
Q ss_pred eeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcc
Q 020863 115 VMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGV 194 (320)
Q Consensus 115 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (320)
.....|.+.++.+.+..+.+...+. ..+...++.+++|+++||+|||+.+..+.....++....... + ..
T Consensus 26 ~g~~~~~i~~~~~~s~~~~g~~~s~-~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~----~-----~~ 95 (394)
T PRK03699 26 TGMVMGPIAEYFNLPVSSMSNTFTF-LNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFS----H-----SL 95 (394)
T ss_pred HhhhhHHHHHHhCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc----c-----hH
Confidence 4455688888888876665554443 445578899999999999999998776655444444332211 1 11
Q ss_pred hhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHH-HhcchhHHHHHHHHH
Q 020863 195 YGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAE-LVGTGATFLILAGIA 273 (320)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~ 273 (320)
+..+....+.....+ ...+....+.+|.+|++.|+.+.+..+....+++.+++.....+.. ..+|...|.+.+.+.
T Consensus 96 --~~~~~~~~l~G~~~g-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~ 172 (394)
T PRK03699 96 --ALFSIAMFVLGVVSG-ITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVY 172 (394)
T ss_pred --HHHHHHHHHHHHhhH-hhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 111111122211111 1233445677899999999998888776666777676666555443 457887887766655
Q ss_pred HHHHH
Q 020863 274 VLAVV 278 (320)
Q Consensus 274 ~~~~~ 278 (320)
++..+
T Consensus 173 ~~~~~ 177 (394)
T PRK03699 173 VAIFI 177 (394)
T ss_pred HHHHH
Confidence 54443
No 111
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.13 E-value=1e-09 Score=101.17 Aligned_cols=160 Identities=15% Similarity=0.099 Sum_probs=89.7
Q ss_pred hhhccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHH-hCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchH
Q 020863 85 LDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKK 163 (320)
Q Consensus 85 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~ 163 (320)
.+++++++.+...+..... . ..++...++.|.++++ .|.+..+ ......+..+...++.+++|++.||+|||+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~p~~~~~~~g~s~~~-~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~ 322 (485)
T TIGR00711 249 LRLFKYRNFTIGCVYMSLL-G----LGLYGSFYLLPLYLQQVLGYTALQ-AGLHILPVGLAPMLSSPIAGRMGDKIDPRK 322 (485)
T ss_pred HHHHcCCChHHHHHHHHHH-H----HHHHHHHHHHHHHHHHhcCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHhhcCcHH
Confidence 4567777665543332211 1 1222334566777765 5665544 344455566667889999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHH
Q 020863 164 LALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNW 243 (320)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~ 243 (320)
....+.....++...+... . .. . .. ... ......+.....+....+ ......+..|++.|+++.|+.+....
T Consensus 323 ~~~~g~~~~~~~~~~~~~~--~-~~-~-~~-~~~-~~~~~~l~g~g~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~ 394 (485)
T TIGR00711 323 LVTIGLILYAVGFYWRAFT--F-TP-D-TP-FLA-IALPQFIRGFGMGCFFMP-LTTIALSGLPPHKIARGSSLSNFTRQ 394 (485)
T ss_pred HHHHHHHHHHHHHHHHhcc--C-CC-C-CC-HHH-HHHHHHHHHHHHHHHHHH-HHHHHHhcCCHHHHhHHHHHHHHHHH
Confidence 8766554444333322211 1 11 0 11 111 111111111111111112 22344577899999999999999998
Q ss_pred HHHHHHHHHHHHHHH
Q 020863 244 ISNLIVAQTFLTVAE 258 (320)
Q Consensus 244 ~~~~~~~~~~~~~~~ 258 (320)
+++.+++.+...+.+
T Consensus 395 ~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 395 LGGSIGTALITTILT 409 (485)
T ss_pred HHHHHHHHHHHHHHH
Confidence 998888877766554
No 112
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.12 E-value=1.7e-09 Score=99.37 Aligned_cols=162 Identities=17% Similarity=0.143 Sum_probs=97.9
Q ss_pred eehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchh
Q 020863 117 YYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 196 (320)
Q Consensus 117 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (320)
...|.+.++.+.+..+.+...+ .......++.+++|+++||+|||+++..+.....+....+........ +.
T Consensus 50 ~~~~~i~~~~~~s~~~~g~~~s-~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~----~~--- 121 (467)
T PRK09556 50 AAQNDMISTYGLSTTELGMIGL-GFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGS----VS--- 121 (467)
T ss_pred hhhHHHHHhcCCCHHHHHHHHH-HHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhccc----ch---
Confidence 4467788888988766555444 445557889999999999999999887665554444443332211110 01
Q ss_pred HHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh---cchhHHHHHHHHH
Q 020863 197 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELV---GTGATFLILAGIA 273 (320)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~ 273 (320)
...++...+..........+....+.+|.+|++.|+++.|+......++..+++.+...+.... ++...|.+.+.+.
T Consensus 122 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~ 201 (467)
T PRK09556 122 LGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIA 201 (467)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHH
Confidence 1112222222222222234555678899999999999999888777788777766554443332 3555566655555
Q ss_pred HHHHHHHHhhccc
Q 020863 274 VLAVVFVILFVPE 286 (320)
Q Consensus 274 ~~~~~~~~~~~pe 286 (320)
++..+..+++.++
T Consensus 202 ~~~~i~~~~~~~~ 214 (467)
T PRK09556 202 LIIGFIGLRYGSD 214 (467)
T ss_pred HHHHHHHHHhCCC
Confidence 5444444444443
No 113
>PRK11043 putative transporter; Provisional
Probab=99.12 E-value=4.7e-09 Score=94.37 Aligned_cols=153 Identities=17% Similarity=0.113 Sum_probs=92.4
Q ss_pred HHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHH
Q 020863 120 PTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIA 199 (320)
Q Consensus 120 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (320)
|.+.++.+.+..+.+...+ .......++.++.|+++||+|||+.+..+.....++....... + .. +..
T Consensus 30 ~~i~~~~~~s~~~~g~~~s-~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~----~-----~~--~~l 97 (401)
T PRK11043 30 KAIQADLQTSASAVSASLS-LFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWV----E-----SA--AQL 97 (401)
T ss_pred HHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHh----c-----CH--HHH
Confidence 4466778887665555444 4445568899999999999999998876655444433332211 1 11 111
Q ss_pred HHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHH
Q 020863 200 VIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVF 279 (320)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 279 (320)
++...+ .........+....+.+|.+|++.|+...+.......++..+++.....+.+..||...|.+.+.+.++..+.
T Consensus 98 ~~~~~l-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~ 176 (401)
T PRK11043 98 LVLRFV-QAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILP 176 (401)
T ss_pred HHHHHH-HHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH
Confidence 111111 1111111122334567899999988877777777777777777777766777778888887776666655554
Q ss_pred HHhhcc
Q 020863 280 VILFVP 285 (320)
Q Consensus 280 ~~~~~p 285 (320)
.++..|
T Consensus 177 ~~~~~~ 182 (401)
T PRK11043 177 TLRLKP 182 (401)
T ss_pred HHHcCC
Confidence 433333
No 114
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.12 E-value=3.7e-09 Score=97.26 Aligned_cols=149 Identities=20% Similarity=0.153 Sum_probs=92.7
Q ss_pred CcceeeeehHHH-HHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcchHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 020863 111 GINTVMYYSPTI-VQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDH-FGRKKLALSSLAGVIISLVLLSWAFISGSS 188 (320)
Q Consensus 111 ~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr-~grR~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (320)
+++.+..+.+.+ .+..|.+..+...... .......+..+++|+++|| +|||+.+..+.....++.+.+.... ..
T Consensus 29 ~~y~~~~~l~~yl~~~lg~~~~~a~~i~~-~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~---~~ 104 (489)
T PRK10207 29 GYYGVQGILAVFFVKQLGFSQEQAFITFG-AFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSL---LK 104 (489)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHH-HHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhc---cc
Confidence 344444444444 4456776555433333 3333355667799999999 9999999888776666655543321 00
Q ss_pred CCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccc--hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH
Q 020863 189 ASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQY--RGICGGMSATVNWISNLIVAQTFLTVAELVGTGATF 266 (320)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~--R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 266 (320)
. ....++..+ .........+....+.+|.||++. |..+.++.....++++.+++.+.+.+.+..||+..|
T Consensus 105 ----~---~ll~~~~~l-~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F 176 (489)
T PRK10207 105 ----P---DLIFIALGT-IAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTY 176 (489)
T ss_pred ----h---hHHHHHHHH-HHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHH
Confidence 0 111111211 222222234455678899999874 466778888888899988888888888888988888
Q ss_pred HHHHH
Q 020863 267 LILAG 271 (320)
Q Consensus 267 ~~~~~ 271 (320)
++.+.
T Consensus 177 ~i~~i 181 (489)
T PRK10207 177 NLCGA 181 (489)
T ss_pred HHHHH
Confidence 77543
No 115
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.10 E-value=5.1e-09 Score=92.79 Aligned_cols=160 Identities=20% Similarity=0.230 Sum_probs=95.8
Q ss_pred eeeehHH-HHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCc
Q 020863 115 VMYYSPT-IVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSG 193 (320)
Q Consensus 115 ~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (320)
...+.|. +.++.|.+....+... ....+...++.++.|+++||+|||+.+..+.....++....... ..
T Consensus 20 ~~~~~~~~~~~~~~~s~~~~~~~~-~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~--~~------- 89 (366)
T TIGR00886 20 FSPLAVQMIKDDLGLSTAQLGNLV-AVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLA--VQ------- 89 (366)
T ss_pred hHHhhhHHHHHHhCCCHHHhhHhh-HHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH--hh-------
Confidence 3445674 6678888766655544 44455578999999999999999998877766555554443322 10
Q ss_pred chhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH----------hcch
Q 020863 194 VYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAEL----------VGTG 263 (320)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~----------~g~~ 263 (320)
.+ +..++. .+..... .+.......+.+|.+|++.|+++.++......++..+++.+.+.+... .+|.
T Consensus 90 ~~-~~~~~~-~~~~g~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~ 166 (366)
T TIGR00886 90 SY-SVLLLL-RLFIGIA-GGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWG 166 (366)
T ss_pred hH-HHHHHH-HHHHHHh-chhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccccccc
Confidence 01 111111 1222222 222333456788999999999999998877777777776665554432 2566
Q ss_pred hHH-HHHHHHHHHHHHHHHhhcccC
Q 020863 264 ATF-LILAGIAVLAVVFVILFVPET 287 (320)
Q Consensus 264 ~~~-~~~~~~~~~~~~~~~~~~pet 287 (320)
..+ ...+.+..+..++.+.+.+|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (366)
T TIGR00886 167 WAFVIVPAGILLLPALLIFFVGADT 191 (366)
T ss_pred chhHHHHHHHHHHHHHHHHHhcccC
Confidence 666 333444444444444455554
No 116
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.10 E-value=1.4e-09 Score=98.29 Aligned_cols=164 Identities=17% Similarity=0.140 Sum_probs=97.3
Q ss_pred eeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcch
Q 020863 116 MYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVY 195 (320)
Q Consensus 116 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (320)
....|.+.++.+.+.... ...........+++.++.|+++||+|||+.+..+.....++...+........ +. +
T Consensus 37 ~~~~~~~~~~~~~s~~~~-g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~----~~-~ 110 (417)
T PRK10489 37 GVAVPVQIQMMTGSTLQV-GLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPE----PS-L 110 (417)
T ss_pred HHHHHHHHHHHHCCHHHH-HHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCC----Cc-H
Confidence 345677777777755443 34444555667888999999999999999776554444443333221111110 01 1
Q ss_pred hHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHH
Q 020863 196 GWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVL 275 (320)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 275 (320)
+ .+....+..........+....+.+|.+|++.|+++.++......++..+++.+...+.+..++.+.+.+.+...++
T Consensus 111 -~-~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~ 188 (417)
T PRK10489 111 -L-AIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFI 188 (417)
T ss_pred -H-HHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 1 11111111111111112333467789999999999999988888888888887777776667777777665555444
Q ss_pred HHHHHHhhcccCC
Q 020863 276 AVVFVILFVPETQ 288 (320)
Q Consensus 276 ~~~~~~~~~pet~ 288 (320)
..+ ..+.+|+++
T Consensus 189 ~~~-~~~~l~~~~ 200 (417)
T PRK10489 189 TLL-PLLRLPALP 200 (417)
T ss_pred HHH-HHHhCCCCC
Confidence 443 345567653
No 117
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.09 E-value=1.8e-08 Score=91.90 Aligned_cols=168 Identities=21% Similarity=0.294 Sum_probs=105.2
Q ss_pred ehHHHHH-HhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcch--HHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcc
Q 020863 118 YSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRK--KLALSSLAGVIISLVLLSWAFISGSSASSSGV 194 (320)
Q Consensus 118 ~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (320)
+...+.+ ..|++..+. ....+...+.+++|+++.+++.||+|.| +.+..+.....+..+...+-+.....+. ...
T Consensus 303 ~~~i~a~~~lg~s~~~l-~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~-~~~ 380 (477)
T PF11700_consen 303 FAGIYATEVLGMSTTQL-IVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGL-KSP 380 (477)
T ss_pred HHHHHHHHhcCcCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCc-ccH
Confidence 3333434 678876654 3445555666889999999999999998 6655443332111111111011111111 111
Q ss_pred hhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-chhHHHHHHHHH
Q 020863 195 YGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG-TGATFLILAGIA 273 (320)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~ 273 (320)
+. .....++...+..+..+..-.+.+|+.|++..+...|+....++..++++|.++..+.+..| ....+.....+.
T Consensus 381 ~~---f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf 457 (477)
T PF11700_consen 381 WE---FWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLF 457 (477)
T ss_pred HH---HHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHH
Confidence 11 11122222223333445567888999999999999999999999999999999999988887 566777766776
Q ss_pred HHHHHHHHhhcccCCCCC
Q 020863 274 VLAVVFVILFVPETQGLT 291 (320)
Q Consensus 274 ~~~~~~~~~~~pet~g~~ 291 (320)
+++.++ +..++..||+.
T Consensus 458 ~~gl~l-l~~v~~~~g~~ 474 (477)
T PF11700_consen 458 LIGLIL-LFFVDVEKGRE 474 (477)
T ss_pred HHHHHH-Hhhccchhhhh
Confidence 666654 46777777764
No 118
>PRK15075 citrate-proton symporter; Provisional
Probab=99.09 E-value=6.2e-09 Score=94.65 Aligned_cols=163 Identities=18% Similarity=0.131 Sum_probs=89.3
Q ss_pred HHHHHhhcCcceeeeehHHHHHHhCCCCcHHHHHH-HHHH----HHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHH
Q 020863 103 LQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLL-SLAV----AGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLV 177 (320)
Q Consensus 103 l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~----~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~ 177 (320)
+..+..+.....+....|.+.++.+.+..+..... +... .....++.++.|+++||+|||+.+..+.....++..
T Consensus 22 ~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~ 101 (434)
T PRK15075 22 SGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTL 101 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHH
Confidence 33444444445566778888888887665543322 1111 111236788899999999999998877665554444
Q ss_pred HHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHH-
Q 020863 178 LLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTV- 256 (320)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~- 256 (320)
...+. ++...........++...+..........+....+.+|.+|++.|+++.++.....+++..+++.+-..+
T Consensus 102 l~~~~----~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~ 177 (434)
T PRK15075 102 LIAFV----PGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLN 177 (434)
T ss_pred HHHhC----CcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33221 1000000000001122222222222222333457889999999999999988777666655444332222
Q ss_pred -------HHHhcchhHHHHH
Q 020863 257 -------AELVGTGATFLIL 269 (320)
Q Consensus 257 -------~~~~g~~~~~~~~ 269 (320)
....||..+|++.
T Consensus 178 ~~~~~~~~~~~gWr~~f~~~ 197 (434)
T PRK15075 178 QWLSPAQMAEWGWRIPFLIG 197 (434)
T ss_pred HhCCHHHHhccchHHHHHHH
Confidence 2345777777653
No 119
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.08 E-value=3.8e-09 Score=107.46 Aligned_cols=155 Identities=16% Similarity=0.135 Sum_probs=85.3
Q ss_pred HHHHHHhCCCCc-HHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHH
Q 020863 120 PTIVQMAGFQSN-QLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWI 198 (320)
Q Consensus 120 ~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (320)
+++.+..|.+.. ..+ .......++.+++.+++++++||+++|+.+..+.++.+++.+.+... . . .+.
T Consensus 257 ~~~~~~~g~s~~~~~g-~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~--~-------~--~~~ 324 (1146)
T PRK08633 257 AYAKEVLGLDNTFQVQ-YLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTA--P-------S--LAS 324 (1146)
T ss_pred HHHHHHhCCCcHHHHH-HHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHh--h-------h--HHH
Confidence 334455677655 333 33444455577889999999999998887665544444433332221 0 0 011
Q ss_pred HHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHH
Q 020863 199 AVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAEL-VGTGATFLILAGIAVLAV 277 (320)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~ 277 (320)
.+++..++..+. ....+....+..+..|++.|+++.|+.+.+..++..+++.+...+... .+....+.+.+.+.++..
T Consensus 325 ~~~~~~~~g~~~-~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 403 (1146)
T PRK08633 325 VLVLFFLFGFSA-GLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLIGT 403 (1146)
T ss_pred HHHHHHHHHHHH-HHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 222222222222 122334467778999999999999999888888776554443333221 222334444444444444
Q ss_pred HHHHhhcccC
Q 020863 278 VFVILFVPET 287 (320)
Q Consensus 278 ~~~~~~~pet 287 (320)
++.....|++
T Consensus 404 ~~~~~~~~~~ 413 (1146)
T PRK08633 404 LYTLLLLPDS 413 (1146)
T ss_pred HHHHHHhHHH
Confidence 4444455554
No 120
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.08 E-value=1.7e-09 Score=93.94 Aligned_cols=162 Identities=20% Similarity=0.194 Sum_probs=112.1
Q ss_pred eehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchh
Q 020863 117 YYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 196 (320)
Q Consensus 117 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (320)
.-.|.+.++.+++..+.+.+.+ ...+...++-.+.|.++||.+.|..+..+++.++++.+++......
T Consensus 50 ~a~p~l~e~~~lsk~~lG~i~s-~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~----------- 117 (448)
T COG2271 50 LAMPALIEDGGLSKTQLGILGS-AFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSL----------- 117 (448)
T ss_pred hccHHHHHhcCCCHHHHHHHHH-HHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHH-----------
Confidence 4467888888887666655444 4556678999999999999999998888877777777666543210
Q ss_pred HHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHH--HHHHHHhcchhHHHHHHHHHH
Q 020863 197 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTF--LTVAELVGTGATFLILAGIAV 274 (320)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~ 274 (320)
++..+...+-..+-+.|+ |......+.-||++.||+..++=++..++|+.+.+.+. .....+.+|...|++-+++++
T Consensus 118 ~~~~~l~~lng~fQg~Gw-pp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiai 196 (448)
T COG2271 118 FLFAVLWVLNGWFQGMGW-PPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAI 196 (448)
T ss_pred HHHHHHHHHHHHHhcCCC-cHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHH
Confidence 112222222233333343 33456777899999999999999999999988877766 445555578888888777777
Q ss_pred HHHHHHHhhc---ccCCCCC
Q 020863 275 LAVVFVILFV---PETQGLT 291 (320)
Q Consensus 275 ~~~~~~~~~~---pet~g~~ 291 (320)
+..+++++.. ||+.|.+
T Consensus 197 ival~~~~~~rd~Pqs~GLP 216 (448)
T COG2271 197 IVALILLFLLRDRPQSEGLP 216 (448)
T ss_pred HHHHHHHHHhCCCccccCCC
Confidence 6666666665 4555553
No 121
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.08 E-value=6.7e-09 Score=95.38 Aligned_cols=155 Identities=17% Similarity=0.078 Sum_probs=99.3
Q ss_pred cCcceeeeehHHHHHH---hCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcchHHHHHHhHHHHHHHHHHHHHHHh
Q 020863 110 TGINTVMYYSPTIVQM---AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDH-FGRKKLALSSLAGVIISLVLLSWAFIS 185 (320)
Q Consensus 110 ~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr-~grR~~~~~~~~~~~~~~~~~~~~~~~ 185 (320)
.+++.+..++|.++++ .|.+..+.+. ..........++.+++|+++|| +|||+.+..+.....++...+...
T Consensus 24 ~~~~~~~~~L~~yl~~~~~lg~s~~~ag~-~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~--- 99 (475)
T TIGR00924 24 FSYYGMQGILAVYLVQQAGLGFSQEQAFI-IFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMS--- 99 (475)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCHHHHHH-HHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhc---
Confidence 3444555567777665 5666555444 3444555578999999999999 899998887766555554433221
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccc---hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 020863 186 GSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQY---RGICGGMSATVNWISNLIVAQTFLTVAELVGT 262 (320)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~---R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~ 262 (320)
+. . +...++..+ .........+....+.+|.+|++. |+++.++.+...++|+.+++.+...+.+..|+
T Consensus 100 -~~------~-~~~~~~~~l-~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~ 170 (475)
T TIGR00924 100 -IY------P-DLIFYGLGT-IAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGY 170 (475)
T ss_pred -cc------H-hHHHHHHHH-HHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 10 0 111111111 111111233455577889998754 88888999999999999999888888887788
Q ss_pred hhHHHHHHHHHHHHH
Q 020863 263 GATFLILAGIAVLAV 277 (320)
Q Consensus 263 ~~~~~~~~~~~~~~~ 277 (320)
...|.+.+...+++.
T Consensus 171 ~~~f~~~~~~~~~~~ 185 (475)
T TIGR00924 171 HVGFNLAAVGMVIGL 185 (475)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888877665444443
No 122
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.07 E-value=7.8e-09 Score=90.62 Aligned_cols=155 Identities=24% Similarity=0.306 Sum_probs=101.4
Q ss_pred CcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCC
Q 020863 111 GINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSAS 190 (320)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (320)
+........|.+.++.+.+..+.+... ........++.++.|+++||+|||+....+.....++....... .
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~----~--- 85 (352)
T cd06174 14 DRGLLSPALPLLAEDLGLSASQAGLIV-SAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFA----S--- 85 (352)
T ss_pred hhhhhHhhHHHHHHHcCCCHHHHHHHH-HHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHh----c---
Confidence 334444566778888887765554443 44455578899999999999999998776666555554443322 0
Q ss_pred CCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Q 020863 191 SSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILA 270 (320)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 270 (320)
. . + ......+..........+....+.+|.+|++.|++..|+......++..+++.+...+.+..++...+.+.+
T Consensus 86 --~-~-~-~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (352)
T cd06174 86 --S-L-W-LLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILA 160 (352)
T ss_pred --c-H-H-HHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 0 0 1 111122222222222344556788999999999999999999999999888888877777767766666655
Q ss_pred HHHHHHHH
Q 020863 271 GIAVLAVV 278 (320)
Q Consensus 271 ~~~~~~~~ 278 (320)
.+.++..+
T Consensus 161 ~~~~~~~~ 168 (352)
T cd06174 161 ILGLLLAL 168 (352)
T ss_pred HHHHHHHH
Confidence 55544443
No 123
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.06 E-value=9.1e-09 Score=92.53 Aligned_cols=153 Identities=16% Similarity=0.098 Sum_probs=96.4
Q ss_pred HHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHH
Q 020863 121 TIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAV 200 (320)
Q Consensus 121 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (320)
++.++.|.+....+.... .......+..+++|+++||+|||+.+..+.....+........ + . . +...
T Consensus 36 ~~~~~~g~s~~~~gl~~~-~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~----~-----~-~-~~l~ 103 (400)
T PRK11646 36 RFVDQLGWAAVMVGIALG-LRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIA----H-----E-P-WLLW 103 (400)
T ss_pred HHHHHhCCcHHHHHHHHH-HHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHh----c-----c-H-HHHH
Confidence 345667877655444333 3344456667889999999999998877666555544433221 1 1 1 1111
Q ss_pred HHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHH
Q 020863 201 IGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFV 280 (320)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 280 (320)
+...+ .........+....+..|.+|++.|+++.|+......++..+++.+...+. ..|+...|.+.+...++..++.
T Consensus 104 ~~~~l-~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~ 181 (400)
T PRK11646 104 LSCIL-SGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFN 181 (400)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHH
Confidence 11111 111111123344567789999999999999999999999988887777666 5677777777666665555554
Q ss_pred HhhcccC
Q 020863 281 ILFVPET 287 (320)
Q Consensus 281 ~~~~pet 287 (320)
.++.||.
T Consensus 182 ~~~~~~~ 188 (400)
T PRK11646 182 AWLLPAY 188 (400)
T ss_pred HHhCCcc
Confidence 5566764
No 124
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.05 E-value=2.1e-08 Score=89.62 Aligned_cols=174 Identities=14% Similarity=0.067 Sum_probs=90.0
Q ss_pred chhhhccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcch
Q 020863 83 RYLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRK 162 (320)
Q Consensus 83 ~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR 162 (320)
++++++++|..+........... .+.....+.|.+.++.|.+....+.... ......++..++.+++.||+|+|
T Consensus 197 ~~~~i~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~g~s~~~~g~~~~-~~~~~~~~~~~~~g~l~~r~~~~ 270 (382)
T PRK11128 197 AWKALLKEPTVWRFLLCVSLLQG-----SHAAYYGFSAIYWQAAGYSASTIGYLWS-LGVVAEVLIFAFSNRLFRRWSAR 270 (382)
T ss_pred hHHHHHcChhHHHHHHHHHHHHH-----HhHhHHHHHHHHHHHCCCCHhHHHHHHH-HHHHHHHHHHHHHHHHHHHCCHH
Confidence 35667787777665443222211 1111223345555677777555444433 33445667778899999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHH
Q 020863 163 KLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVN 242 (320)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~ 242 (320)
+.+..+.....++...+.. . + .. +..++...+....+... .+....+..+. |++.+++..++.+...
T Consensus 271 ~~l~~~~~~~~~~~~~~~~--~--~-----~~--~~~~~~~~l~g~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 337 (382)
T PRK11128 271 DLLLLSAICGVVRWGLMGS--T--T-----AL--PWLIVIQILHCGTFTVC-HLAAMRYIAAR-PGSEVIRLQALYSALA 337 (382)
T ss_pred HHHHHHHHHHHHHHHHHHh--h--h-----hH--HHHHHHHHHHHHHHHHH-HHHHHHHHHHC-CHhhhHHHHHHHHHHH
Confidence 9876655544443332211 1 1 11 11122222222211111 22233455565 4555677777765443
Q ss_pred -HHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHH
Q 020863 243 -WISNLIVAQTFLTVAELVGTGATFLILAGIAVLA 276 (320)
Q Consensus 243 -~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 276 (320)
.++..+++.+...+.+..|. ..++..+++.+++
T Consensus 338 ~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~ 371 (382)
T PRK11128 338 MGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPA 371 (382)
T ss_pred HHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHH
Confidence 34446677777777777664 3455444444443
No 125
>TIGR00898 2A0119 cation transport protein.
Probab=99.05 E-value=3.4e-09 Score=98.27 Aligned_cols=153 Identities=23% Similarity=0.249 Sum_probs=92.5
Q ss_pred ehHHHHHHhCCC---CcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcc
Q 020863 118 YSPTIVQMAGFQ---SNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGV 194 (320)
Q Consensus 118 ~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (320)
+.|.+.++.+.+ ....+. ......+...++.++.|+++||+|||+.+..+.....++.+...+. + .
T Consensus 111 ~~~~i~~e~~l~c~~~~~~~~-~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~----~-----~- 179 (505)
T TIGR00898 111 FSSTIVTEWDLVCEDAWKVDL-TQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFS----P-----N- 179 (505)
T ss_pred ccccEEEEecceechHHHHHH-HHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHc----c-----c-
Confidence 445666677775 333333 3344455578999999999999999998876655554444333221 1 1
Q ss_pred hhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Q 020863 195 YGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAV 274 (320)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 274 (320)
...+....++..+...+..+....+.+|.+|++.|+.+.++......++.++++.+...+ .+|...+.+.+...+
T Consensus 180 --~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~---~~wr~~~~~~~i~~~ 254 (505)
T TIGR00898 180 --YTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFI---PDWRWLQLAVSLPTF 254 (505)
T ss_pred --HHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHH
Confidence 111222222333333344566778999999999999988887655555555544332222 136667776666655
Q ss_pred HHHHHHHhhcccC
Q 020863 275 LAVVFVILFVPET 287 (320)
Q Consensus 275 ~~~~~~~~~~pet 287 (320)
+..+. .+++||+
T Consensus 255 ~~~~~-~~~~~es 266 (505)
T TIGR00898 255 LFFLL-SWFVPES 266 (505)
T ss_pred HHHHH-HHhcCCC
Confidence 55444 4678886
No 126
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.05 E-value=8.5e-09 Score=92.62 Aligned_cols=153 Identities=15% Similarity=0.038 Sum_probs=88.9
Q ss_pred eehHH-HHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcch
Q 020863 117 YYSPT-IVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVY 195 (320)
Q Consensus 117 ~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (320)
...|. +.++.|.+....+...+ .......++.++.|+++||+|||+++..+.....++............ . ...
T Consensus 36 ~~l~~~i~~~~g~s~~~~g~~~~-~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~-~---~~~ 110 (399)
T PRK05122 36 AVLPGYVHDQLGFSAFLAGLVIS-LQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAA-W---PVL 110 (399)
T ss_pred HHHHHHHHHhcCccHHHHHHHHH-HHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhc-c---chh
Confidence 34454 44567777665554444 444557888999999999999999988776555444333322211110 0 000
Q ss_pred hHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Q 020863 196 GWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAV 274 (320)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 274 (320)
....++...+..........+....+..|.+|.+.|+++.|+......++..+++.+-..+.+..|+...+.+.+.+.+
T Consensus 111 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~ 189 (399)
T PRK05122 111 SLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLAL 189 (399)
T ss_pred HHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 1111222222222222223344456678999999999999887766667766777666666666777665555444433
No 127
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.03 E-value=3.6e-09 Score=93.83 Aligned_cols=159 Identities=17% Similarity=0.180 Sum_probs=97.0
Q ss_pred eeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCc
Q 020863 114 TVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSG 193 (320)
Q Consensus 114 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (320)
....+.|.+.++.+.+..+.+...+ .......++.+..|+++||+|||+.+..+.....++.........
T Consensus 21 ~~~~~~~~~~~~~~~s~~~~g~~~s-~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~--------- 90 (377)
T TIGR00890 21 TWTLLAPPLGRYFGVGVTAVAIWFT-LLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADS--------- 90 (377)
T ss_pred hhhhHHHHHHHHhCCCHHHHHHHHH-HHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHH---------
Confidence 3445678888889987666555444 445557899999999999999999887766555554443332210
Q ss_pred chhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHH
Q 020863 194 VYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIA 273 (320)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 273 (320)
+ +...+...+. ........+.......|.+| +.|+++.++......++..+++.......+..||...|.+.+...
T Consensus 91 -~-~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 166 (377)
T TIGR00890 91 -L-AALYLTYGLA-SAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIF 166 (377)
T ss_pred -H-HHHHHHHHHH-hHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 0 1111111111 11111112223345667777 459999888877766776665555555555567877888777776
Q ss_pred HHHHHHHHhhccc
Q 020863 274 VLAVVFVILFVPE 286 (320)
Q Consensus 274 ~~~~~~~~~~~pe 286 (320)
++..+..+++.++
T Consensus 167 ~~~~~~~~~~~~~ 179 (377)
T TIGR00890 167 LLVIVLGAFLIGY 179 (377)
T ss_pred HHHHHHHHHheec
Confidence 6666555555544
No 128
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.03 E-value=4.1e-08 Score=88.12 Aligned_cols=213 Identities=16% Similarity=0.153 Sum_probs=107.0
Q ss_pred CchHHHHhhhhHHHHHHHHH-hhcCCCChHHHHhcCCHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHhccccchhhh
Q 020863 9 GTWRWMLGVSAVPAIIQFVL-MLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDV 87 (320)
Q Consensus 9 ~~WR~~f~i~~~~~l~~~~~-~~~lpESp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (320)
.+||+.|++.++.+++..+. +..+||+|+. +++. ....++.
T Consensus 171 ~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~~------~~~~--------------------------------~~~~~~~ 212 (394)
T PRK10213 171 IGWRNVFNAAAVMGVLCIFWIIKSLPSLPGE------PSHQ--------------------------------KQNTFRL 212 (394)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHCCCCCcc------cccc--------------------------------hhHHHHH
Confidence 37999999988877765444 3457886521 0000 0012235
Q ss_pred ccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHH
Q 020863 88 FKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALS 167 (320)
Q Consensus 88 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~ 167 (320)
+++|..+...+..... .... . ....++.|.+.++.|.+...... ......+...++.++.+++.||.+|+....
T Consensus 213 l~~~~~~~~~~~~~~~-~~~~-~--~~~~~~~p~~~~~~g~s~~~~g~-~~~~~~~~~iig~~~~~~l~~r~~~~~l~~- 286 (394)
T PRK10213 213 LQRPGVMAGMIAIFMS-FAGQ-F--AFFTYIRPVYMNLAGFGVDGLTL-VLLSFGIASFVGTSLSSFILKRSVKLALAG- 286 (394)
T ss_pred hcCHHHHHHHHHHHHH-HHHH-H--HHHHHHHHHHHHhcCCChhHHHH-HHHHHHHHHHHHHHHHHHHHhccchhHHHH-
Confidence 6666665543322111 1111 1 11223457777777877654333 333444557788889999999954443332
Q ss_pred HhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHH
Q 020863 168 SLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNL 247 (320)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~ 247 (320)
......++...+... . . . .+.......+....+. ...+....+..+..|++ +++..++......++..
T Consensus 287 ~~~~~~~~~~~l~~~--~-~-----~--~~~~~~~~~l~G~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~lg~~ 354 (394)
T PRK10213 287 APLVLAVSALVLTLW--G-S-----D--KIVATGVAIIWGLTFA-LVPVGWSTWITRSLADQ-AEKAGSIQVAVIQLANT 354 (394)
T ss_pred HHHHHHHHHHHHHHH--h-h-----h--HHHHHHHHHHHHHHHH-hhhHHHHHHHHHHCccc-HHHHHHHHHHHHHHHHH
Confidence 222222221111111 1 0 0 0111112222221211 11222233455666744 45566666666677888
Q ss_pred HHHHHHHHHHHHhcchhHHHHHHHHHHHHH
Q 020863 248 IVAQTFLTVAELVGTGATFLILAGIAVLAV 277 (320)
Q Consensus 248 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 277 (320)
+++.+...+.+..|....+...+++.++..
T Consensus 355 ~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~ 384 (394)
T PRK10213 355 CGAAIGGYALDNIGLTSPLMLSGTLMLLTA 384 (394)
T ss_pred HHHHHHHHHHhccChhhHHHHHHHHHHHHH
Confidence 888888888887776656655554444443
No 129
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.02 E-value=1.3e-08 Score=91.26 Aligned_cols=151 Identities=14% Similarity=0.112 Sum_probs=92.9
Q ss_pred HHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHH
Q 020863 120 PTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIA 199 (320)
Q Consensus 120 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (320)
+.+.++.+.+....++. .........+..+++|+++||+|||+++..+.....++.+....... .
T Consensus 27 ~~~~~~~~~s~~~~~~~-~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~------------~-- 91 (393)
T PRK11195 27 IALLKELHYPDWSQPLL-QMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIH------------P-- 91 (393)
T ss_pred HHHHHHcCCcHHHHHHH-HHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHH------------H--
Confidence 44566677665444433 33444557888999999999999999888776655444433222100 0
Q ss_pred HHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHH
Q 020863 200 VIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVF 279 (320)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 279 (320)
+. ..+..........+...++.+|++|++.|+++.|+......++..+++.+-..+.+.. +...+.+.+...+++ ++
T Consensus 92 ~~-~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~~~~~i~~~~~~~~-~~ 168 (393)
T PRK11195 92 LL-AYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH-AEAALAVCALIYLLA-AL 168 (393)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH-HH
Confidence 11 1112223333445666788999999999999999988888888888877766655533 333444333333333 33
Q ss_pred HHhhcccCC
Q 020863 280 VILFVPETQ 288 (320)
Q Consensus 280 ~~~~~pet~ 288 (320)
..+++||.+
T Consensus 169 ~~~~l~~~~ 177 (393)
T PRK11195 169 FNLFIPRLG 177 (393)
T ss_pred HHhcCCCCc
Confidence 446677754
No 130
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.02 E-value=3.9e-08 Score=88.72 Aligned_cols=138 Identities=18% Similarity=0.134 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccch
Q 020863 140 AVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPW 219 (320)
Q Consensus 140 ~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (320)
+..+++++|++.+++++||+|||..+........++............. -..+++-.+.....+...+ ...
T Consensus 68 ~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~--------e~li~GR~i~Gl~~gl~~~-~~p 138 (485)
T KOG0569|consen 68 IFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSF--------EMLILGRLIVGLACGLSTG-LVP 138 (485)
T ss_pred HHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhH--------HHHHHHHHHHHHHhHHHHH-HHH
Confidence 3445578899999999999999988777766666665555444322110 1122222222222222222 334
Q ss_pred hcccccCCccchhhhHHHHHHHHHHHHHHHHHH-HHHHH-HHhcchhHHHHHHHHHHHHHHHHHhhcccC
Q 020863 220 TLNSEVYPEQYRGICGGMSATVNWISNLIVAQT-FLTVA-ELVGTGATFLILAGIAVLAVVFVILFVPET 287 (320)
Q Consensus 220 ~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~-~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~pet 287 (320)
.|..|+.|++.||....+......++..++..+ .+.+. ....|...+.+-+..+++ ..+...+.||+
T Consensus 139 myl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~-~l~~l~~~PES 207 (485)
T KOG0569|consen 139 MYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALL-QLALLPFLPES 207 (485)
T ss_pred HHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHH-HHHHHhcCCCC
Confidence 688899999999988777766666666655332 22222 112233333333333333 34456789998
No 131
>PTZ00207 hypothetical protein; Provisional
Probab=99.01 E-value=3e-08 Score=92.09 Aligned_cols=161 Identities=14% Similarity=0.148 Sum_probs=92.4
Q ss_pred eeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCc
Q 020863 114 TVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSG 193 (320)
Q Consensus 114 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (320)
....+.+.+.++.|.+..+.+...++ ... .....+.+|++.||+|||+++..+.....++.+......... . ...
T Consensus 45 ~fsv~s~~L~~~lgls~~~l~~i~sv-g~~-~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~--i-~~s 119 (591)
T PTZ00207 45 AFNLISGAMQARYNLTQRDLSTITTV-GIA-VGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEV--I-EGS 119 (591)
T ss_pred HHHHHHHHHHHHhCcCHHHHHHHHHH-HHH-HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhccc--c-cCc
Confidence 34466788888889886665554443 222 234555789999999999999888777666665544431110 0 011
Q ss_pred chhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHH
Q 020863 194 VYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIA 273 (320)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 273 (320)
. +...+ .............+.......+.|| +.||++.|+......+++.+.+.++..+.. .++...|++.+.+.
T Consensus 120 ~--~~l~l-~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~ 194 (591)
T PTZ00207 120 V--VRLSV-YNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFA 194 (591)
T ss_pred H--HHHHH-HHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHH
Confidence 1 11111 1111111111112223345678887 669999999998888888765555554433 24555666666666
Q ss_pred HHHHHHHHhhc
Q 020863 274 VLAVVFVILFV 284 (320)
Q Consensus 274 ~~~~~~~~~~~ 284 (320)
++..++...++
T Consensus 195 ~vv~ll~~~~v 205 (591)
T PTZ00207 195 LVVGILAIVFM 205 (591)
T ss_pred HHHHHHHHhhe
Confidence 55555544444
No 132
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.01 E-value=4.6e-08 Score=87.41 Aligned_cols=146 Identities=13% Similarity=0.113 Sum_probs=90.2
Q ss_pred eehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchh
Q 020863 117 YYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 196 (320)
Q Consensus 117 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (320)
.+.|.+.++.|.+....+.... ...+..+++.+..++++||+|||+.+..+.....++..... . . ...
T Consensus 221 ~~lp~~~~~~g~s~~~~g~~~~-~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~----~-~-----~~~- 288 (381)
T PRK03633 221 GLMPLYLNHQGMSDASIGFWMA-LLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML----S-Q-----AAM- 288 (381)
T ss_pred HHHHHHHHHcCCCHHHHHHHHH-HHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh----h-h-----HHH-
Confidence 3567788877776555444333 44455788999999999999999887655444433332211 0 0 000
Q ss_pred HHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHH
Q 020863 197 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLA 276 (320)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 276 (320)
........ .......+....+..|..|++.++...+..+....++..+++.+...+.+..|+...|.+.+.+.++.
T Consensus 289 ~~~~~l~g----~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~ 364 (381)
T PRK03633 289 APALFILG----AAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIY 364 (381)
T ss_pred HHHHHHHH----HHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHH
Confidence 11111111 11112345555667798888777766666666677888888888888888888777777766666555
Q ss_pred HH
Q 020863 277 VV 278 (320)
Q Consensus 277 ~~ 278 (320)
.+
T Consensus 365 ~~ 366 (381)
T PRK03633 365 LL 366 (381)
T ss_pred HH
Confidence 43
No 133
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.00 E-value=4e-08 Score=88.15 Aligned_cols=148 Identities=16% Similarity=0.039 Sum_probs=95.0
Q ss_pred ceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCC
Q 020863 113 NTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSS 192 (320)
Q Consensus 113 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (320)
.......|.+.++.+.+..+.+...+.. .....++.++.|+++||+|||+++..+.....++....... ++
T Consensus 26 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~-~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a----~~---- 96 (393)
T PRK09705 26 TSVGPLLPQLRQASGMSFSVAALLTALP-VVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELY----PQ---- 96 (393)
T ss_pred hccchhHHHHHHHhCCCHHHHHHHHHHH-HHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHC----cc----
Confidence 3445667888999998876655555444 44578889999999999999999988777666665544322 11
Q ss_pred cchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhHHHHHHH
Q 020863 193 GVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELV-GTGATFLILAG 271 (320)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~ 271 (320)
.. .+....+..........+....+..+.+| +.|+.+.|+.......+..+++.+.+.+.++. +|...+.+++.
T Consensus 97 -~~---~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~ 171 (393)
T PRK09705 97 -SA---LLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWAL 171 (393)
T ss_pred -hH---HHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 01 11112222222222223344466788887 66999999888777777778777777666654 67666655444
Q ss_pred HHH
Q 020863 272 IAV 274 (320)
Q Consensus 272 ~~~ 274 (320)
..+
T Consensus 172 ~~~ 174 (393)
T PRK09705 172 PAV 174 (393)
T ss_pred HHH
Confidence 433
No 134
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.00 E-value=1.3e-08 Score=90.46 Aligned_cols=157 Identities=17% Similarity=0.147 Sum_probs=90.0
Q ss_pred hHH-HHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHH-HhHHHHHHHHHHHHHHHhcCCCCCCcchh
Q 020863 119 SPT-IVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALS-SLAGVIISLVLLSWAFISGSSASSSGVYG 196 (320)
Q Consensus 119 ~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (320)
.|. +.++.|.+....+...+ .......+..++.|.++||+|||+.+.. +.....++..... . .+ . +
T Consensus 20 l~~~l~~~~g~s~~~~g~~~~-~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~--~--~~-----~-~- 87 (375)
T TIGR00899 20 LSLFLSEEVRARPAMIGLFYT-GSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFA--W--NR-----N-Y- 87 (375)
T ss_pred HHHHHHcccCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHH--h--cc-----h-H-
Confidence 344 34567877655554443 3334467778889999999999886543 2222222222211 1 11 1 1
Q ss_pred HHHHHHHHHHHHHHhccccccchhcccccCCccchhhh--HHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Q 020863 197 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGIC--GGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAV 274 (320)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~--~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 274 (320)
+ .++..............+....+..|..|++.|+.+ .+.....+.++..+++.....+.+..||...|.+.+.+.+
T Consensus 88 ~-~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~ 166 (375)
T TIGR00899 88 F-LLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFV 166 (375)
T ss_pred H-HHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHH
Confidence 1 111111111222222344445667788887777643 4665556667777777776666677788888888777766
Q ss_pred HHHHHHHhhcccCC
Q 020863 275 LAVVFVILFVPETQ 288 (320)
Q Consensus 275 ~~~~~~~~~~pet~ 288 (320)
+..+..++++||.+
T Consensus 167 ~~~~~~~~~~~~~~ 180 (375)
T TIGR00899 167 LCGVLVWLFLPSYP 180 (375)
T ss_pred HHHHHHHHhCCCcc
Confidence 66666666678754
No 135
>PRK12382 putative transporter; Provisional
Probab=98.99 E-value=2.6e-08 Score=89.26 Aligned_cols=146 Identities=14% Similarity=0.064 Sum_probs=82.8
Q ss_pred ehHH-HHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchh
Q 020863 118 YSPT-IVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 196 (320)
Q Consensus 118 ~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (320)
..|. +.++.|.+..+.+...+ .......++.++.|+++||+|||+.+..+.....++.+........ ... ....
T Consensus 37 ~l~~~l~~~lg~s~~~~g~~~s-~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~-~~~---~~~~ 111 (392)
T PRK12382 37 VIPLFVHHDLGFGNTMVGIAVG-IQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAIL-PVS---APFK 111 (392)
T ss_pred hhhHHHHHhcCCcHHHHHHHHH-HHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhcc-ccc---hhHH
Confidence 3444 44677887666555444 4445578889999999999999998877655444433222111110 000 0001
Q ss_pred HHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHH
Q 020863 197 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLI 268 (320)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 268 (320)
...+....+..........+....+..|.+|++.|+++.|+.......+..+++.+-..+.+..|+...+.+
T Consensus 112 ~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~ 183 (392)
T PRK12382 112 FALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALT 183 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHH
Confidence 111111112222111112233345667999999999999987776667777777666656666676554443
No 136
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.98 E-value=1.9e-08 Score=102.36 Aligned_cols=139 Identities=12% Similarity=0.025 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccch
Q 020863 140 AVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPW 219 (320)
Q Consensus 140 ~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (320)
...+..++.++++|+++||+|||+++........+........+... . ...++...+..........+...
T Consensus 60 ~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~------s---~~~l~~~~~l~gi~~a~~~p~~~ 130 (1140)
T PRK06814 60 VFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLN------S---VPLLFAALFLMGIHSALFGPIKY 130 (1140)
T ss_pred HHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHh------h---HHHHHHHHHHHHHHHHhhchHHH
Confidence 44444678889999999999999975332222211111111111111 0 11222223333333444567778
Q ss_pred hcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhcccCC
Q 020863 220 TLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPETQ 288 (320)
Q Consensus 220 ~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~ 288 (320)
++.++++|.+.|+.+.|+......++..+++.+-..+....++...| +..++..+.++++.+++|+++
T Consensus 131 a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 198 (1140)
T PRK06814 131 SILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILV-ALLMGIAVLGWLASLFIPKTG 198 (1140)
T ss_pred HhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHH-HHHHHHHHHHHHHHhhCCCCC
Confidence 89999999999999999999999999999988888777777776666 333333333344455666653
No 137
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.98 E-value=2.2e-08 Score=90.18 Aligned_cols=140 Identities=10% Similarity=-0.062 Sum_probs=78.7
Q ss_pred eehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchh
Q 020863 117 YYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 196 (320)
Q Consensus 117 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (320)
.+.+.++++.+.+..+.+... ........++.++.|.++||+|||+.+..+.....++....... ... . ...
T Consensus 34 ~~~~~~~~~~g~s~~~~g~~~-~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~-~~~-~---~~~-- 105 (402)
T TIGR00897 34 GWLSPFLKALGLSPQQSASAF-TLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVF-GLG-H---ANY-- 105 (402)
T ss_pred HhHHHHHHHhCCCHHHhHHHH-HHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHH-hcc-C---ccH--
Confidence 345666788888766655544 45555678999999999999999998876655544443322111 110 0 011
Q ss_pred HHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHH-HHHHHHHHHHHHHhcchhH
Q 020863 197 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISN-LIVAQTFLTVAELVGTGAT 265 (320)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~-~~~~~~~~~~~~~~g~~~~ 265 (320)
+..++...+ .........+....+..+.+|++.|+++.|+......++. .+++.+...+.+..|+...
T Consensus 106 ~~l~~~~~i-~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~ 174 (402)
T TIGR00897 106 PLILLFYGI-RGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNT 174 (402)
T ss_pred HHHHHHHHH-HHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHH
Confidence 111111111 1111111122233456688999999999999887777764 3454443344444554333
No 138
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.98 E-value=2.3e-09 Score=94.28 Aligned_cols=126 Identities=24% Similarity=0.336 Sum_probs=73.3
Q ss_pred eeeehHHH-HHHhCCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCC
Q 020863 115 VMYYSPTI-VQMAGFQ-SNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSS 192 (320)
Q Consensus 115 ~~~~~~~~-~~~~g~~-~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (320)
...+.|.+ .+..+.+ ...... ..........++.++.++++||+++|+..........+....+....... +
T Consensus 225 ~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 298 (352)
T PF07690_consen 225 FSFFLPLYLQEVLGFSGPSQAGL-LFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSS-----S 298 (352)
T ss_dssp HHHHHHHHCCHHHHCCTHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHC-----H
T ss_pred hhcccchhhhhccCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhh-----h
Confidence 44556665 5566776 233332 23344455677789999999999987765544433333332221111110 0
Q ss_pred cchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHH
Q 020863 193 GVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVA 250 (320)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~ 250 (320)
. ........+. .+......+....+..|.+|++.|+++.|+.+....+++.++|
T Consensus 299 ~---~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 299 P---VWLIIALFLI-GFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp H---HHHHHHHHHH-HHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred H---HHHHHHHHHH-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 0 1111111121 1222223556678889999999999999999999988887764
No 139
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.97 E-value=2.1e-07 Score=84.14 Aligned_cols=117 Identities=19% Similarity=0.243 Sum_probs=60.9
Q ss_pred CchHHHHhhhhHHHHHHHHH-hhcCCCChHHHHhcCCHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHhccccchhhh
Q 020863 9 GTWRWMLGVSAVPAIIQFVL-MLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDV 87 (320)
Q Consensus 9 ~~WR~~f~i~~~~~l~~~~~-~~~lpESp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (320)
.+||+.|++.++.+++.++. ++++||+++- ++++...+ +. ..+++++
T Consensus 167 ~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~----~~~~~~~~-----------------------~~-----~~~~~~l 214 (413)
T PRK15403 167 VHWKVLFAIIAVMGLIAFVGLLLAMPETVKR----GAVPFSAK-----------------------SV-----LRDFRNV 214 (413)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhCCCCccc----cCCCCChH-----------------------HH-----HHHHHHH
Confidence 37999999999888876654 5578998631 11000000 00 0123456
Q ss_pred ccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHHh-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHH-hhhcchH
Q 020863 88 FKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMA-GFQSNQLALLLSLAVAGTNAVGTIVGIYLI-DHFGRKK 163 (320)
Q Consensus 88 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~-Dr~grR~ 163 (320)
+++|+.+...+..... ...+.....+.|.++++. |.+.... .....+..+...+++.+.+.+. |+.++|.
T Consensus 215 l~~~~~~~~~l~~~~~-----~~~~~~~~~~~P~~l~~~~g~s~~~~-gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~ 286 (413)
T PRK15403 215 FRNRLFLTGAATLSLS-----YIPMMSWVAVSPVILIDAGGMTTSQF-AWTQVPVFGAVIVANAIVARFVKDPTEPRF 286 (413)
T ss_pred HcCHHHHHHHHHHHHH-----HHHHHHHHHhChHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHHhccCCchhH
Confidence 7777776544432211 111222334567777765 6654443 3334444444566666666654 5544443
No 140
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.96 E-value=1.8e-08 Score=89.06 Aligned_cols=159 Identities=13% Similarity=0.096 Sum_probs=85.5
Q ss_pred hhhhccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-ch
Q 020863 84 YLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFG-RK 162 (320)
Q Consensus 84 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~g-rR 162 (320)
.++.++++..+...+... +. ...+.....+.|.++++.|.+...... ......+..+++.++.|++.||++ ||
T Consensus 190 ~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~lp~~~~~~g~~~~~~g~-~~~~~~~~~i~~~~~~g~l~dr~~~~~ 263 (355)
T TIGR00896 190 PVRIWRSPLAWQVTVFFG-LQ----SGLYYSLIGWLPAILISHGASAATAGS-LLALMQLAQAASALLIPALARRVKDQR 263 (355)
T ss_pred CchhhcCHhHHHHHHHHH-HH----HHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHhHHHHHhhhccch
Confidence 345667666554332211 11 111222334678888887776555444 344455668899999999999995 55
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhccc-ccCCccchhhhHHHHHHH
Q 020863 163 KLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNS-EVYPEQYRGICGGMSATV 241 (320)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-ElfP~~~R~~~~gi~~~~ 241 (320)
+....+.....++...+.+. .. +.. +. ...++. .......+....... +..+++.++...|+.+..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~--~~-----~~~--~~---~~~l~g-~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 330 (355)
T TIGR00896 264 GIVAVLAVLQLVGLCGLLFA--PM-----HGL--WA---WALVLG-LGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSI 330 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHh--hh-----hHH--HH---HHHHHH-HhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 55544444444433332221 10 000 11 111111 111111223233333 334556778888888888
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q 020863 242 NWISNLIVAQTFLTVAELVG 261 (320)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~g 261 (320)
+.+++.+++.+...+.++.|
T Consensus 331 ~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 331 GYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 88888888888887777665
No 141
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.96 E-value=3.2e-08 Score=85.71 Aligned_cols=137 Identities=14% Similarity=0.133 Sum_probs=79.8
Q ss_pred eeehHHHHHH---hCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCC
Q 020863 116 MYYSPTIVQM---AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSS 192 (320)
Q Consensus 116 ~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (320)
..|.+.++++ .|.+....+.. ........++|.+++++++||+|+|+.+..+..++.++.... . ..+.
T Consensus 160 ~~w~~~yl~~~~~~g~s~~~a~~~-~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~--~--~~~~---- 230 (310)
T TIGR01272 160 GSFLVNFLSDPHALGLPEDQAAHF-TAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGA--A--LTHG---- 230 (310)
T ss_pred HHHHHHHHHhcccCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH--H--HcCC----
Confidence 3456666654 36655544444 444455578999999999999999887765544443332211 1 1111
Q ss_pred cchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHH
Q 020863 193 GVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLI 268 (320)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 268 (320)
. . ...++. ...++.....|.......+.+|.+ .+++.++. ..+.+|+.+.|.+...+.+..|...+|++
T Consensus 231 ~-~---~~~~~~-l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v 299 (310)
T TIGR01272 231 Y-V---AMWFVL-ALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFAL 299 (310)
T ss_pred H-H---HHHHHH-HHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHH
Confidence 0 0 111111 122333344566566777877765 34566664 56778888888888878787776666553
No 142
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.95 E-value=1.8e-08 Score=102.38 Aligned_cols=243 Identities=14% Similarity=0.052 Sum_probs=119.6
Q ss_pred CchHHHHhhhhHHHHHHHHHhhcCCCChHHHHhcCCHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHhccccchhhhc
Q 020863 9 GTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVF 88 (320)
Q Consensus 9 ~~WR~~f~i~~~~~l~~~~~~~~lpESp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 88 (320)
.+||+.|++.++..++.++...++||++.- .++...+. +.. ++. ...++.+.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~----------~~~------------~~~----~~~~~~~~ 222 (1140)
T PRK06814 171 GNFVILVALLMGIAVLGWLASLFIPKTGNA--APDLKIDR----------NII------------RST----ITLLKYAK 222 (1140)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhCCCCCCC--CCCCeecc----------chH------------HHH----HHHHHHHh
Confidence 479999977777777666667777776521 00000000 000 000 01233455
Q ss_pred cchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHH-hCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHH
Q 020863 89 KSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALS 167 (320)
Q Consensus 89 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~ 167 (320)
+++.++...+........ ......+.|.++++ .|.+....+.. .....++.+++.++.|+++|+.++++....
T Consensus 223 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~p~~~~~~~g~~~~~~g~~-~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~ 296 (1140)
T PRK06814 223 ADKRIWLAILGISWFWLV-----GAVVLSQLPLLAKETLGGDENVATLF-LAVFSVGVAVGSFLASKLSEGRITLLYVPI 296 (1140)
T ss_pred cCchHHHHHHHHHHHHHH-----HHHHHHHhHHHHHHHcCCchHHHHHH-HHHHHHHHHHHHHHHHHHhCCceeeeeehH
Confidence 666665544432222111 11122345665554 56655544443 344555678899999999988777665444
Q ss_pred HhHHHHHHHHHHHHHHHhcCCCCCC---------cchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHH
Q 020863 168 SLAGVIISLVLLSWAFISGSSASSS---------GVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMS 238 (320)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~ 238 (320)
+.++..++.+.+.+........... ....+...+...++..+ .....+...++..+..|++.||++.|+.
T Consensus 297 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~p~~~~G~v~g~~ 375 (1140)
T PRK06814 297 GALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAA-GGLYIVPLFAALQAWANPAHRARVIAAN 375 (1140)
T ss_pred HHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHH-HHHhHHHHHHHHHhhCCcccceeeeHHH
Confidence 3333333222222110000000000 00011122222222221 2222233467888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHHHHHHhhccc
Q 020863 239 ATVNWISNLIVAQTFLTVAEL-VGTGATFLILAGIAVLAVVFVILFVPE 286 (320)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~pe 286 (320)
+..+.++..+++.+...+... .+....+++.+.+.++..+..+...|+
T Consensus 376 ~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (1140)
T PRK06814 376 NVLNAAFMVAGTIILALLQALGFSIPWIILFIALANLIVAILILRLLPT 424 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHChH
Confidence 999888888877766655432 233334444444333333333344444
No 143
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.95 E-value=2.3e-08 Score=86.93 Aligned_cols=154 Identities=21% Similarity=0.179 Sum_probs=102.3
Q ss_pred hHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHH
Q 020863 119 SPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWI 198 (320)
Q Consensus 119 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (320)
.+.+-++.+++..+...+..++ .+.+.+.-+.-|++.||+|-|++...+.+...+-.+.+.+.... . .+...
T Consensus 37 ~~~i~~~~~LS~~q~~ll~aiP-il~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~---~----~~~~l 108 (417)
T COG2223 37 GVFIKSDFGLSEGQKGLLVAIP-ILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTY---P----STWQL 108 (417)
T ss_pred HhhhccccCCCHHHHHHHHHHH-HHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccC---C----chHHH
Confidence 3455678888877766655554 45578888899999999999998876655443333333322211 1 11111
Q ss_pred HHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc---chhHHHHHHHHHHH
Q 020863 199 AVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG---TGATFLILAGIAVL 275 (320)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~ 275 (320)
.+++ ++. ..+.+..++...++++.||++.+|++.|+.. .+|+|..+...+.|.+....| ++.+..++....++
T Consensus 109 l~~g--ll~-G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v 184 (417)
T COG2223 109 LVIG--LLL-GLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAI 184 (417)
T ss_pred HHHH--HHH-hcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 2222 221 2233344555678899999999999999988 999999998888888888777 77777777666666
Q ss_pred HHHHHHhhc
Q 020863 276 AVVFVILFV 284 (320)
Q Consensus 276 ~~~~~~~~~ 284 (320)
..+..++..
T Consensus 185 ~~v~~~~~~ 193 (417)
T COG2223 185 AAVLAWLGM 193 (417)
T ss_pred HHHHHHHHh
Confidence 666555554
No 144
>PRK09952 shikimate transporter; Provisional
Probab=98.94 E-value=4.5e-08 Score=89.11 Aligned_cols=139 Identities=17% Similarity=0.139 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccc
Q 020863 145 NAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSE 224 (320)
Q Consensus 145 ~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E 224 (320)
..++.++.|+++||+|||+.+..+.....++.....+. ++......+....++...+.......+..+....+.+|
T Consensus 77 ~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e 152 (438)
T PRK09952 77 RPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLL----PSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVE 152 (438)
T ss_pred HhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcC----CcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHH
Confidence 55778889999999999999877665555544433221 11000000111122223333333333444555678899
Q ss_pred cCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHH--------HhcchhHHHHHHHHHHHHHHHHHhhcccCC
Q 020863 225 VYPEQYRGICGGMSATVNWISNLIVAQTFLTVAE--------LVGTGATFLILAGIAVLAVVFVILFVPETQ 288 (320)
Q Consensus 225 lfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~--------~~g~~~~~~~~~~~~~~~~~~~~~~~pet~ 288 (320)
.+|++.|+...+.......++..++......+.. ..||...|++.+...++. +......||++
T Consensus 153 ~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~-~~l~~~~~es~ 223 (438)
T PRK09952 153 SAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA-LWVRNGMEESA 223 (438)
T ss_pred hCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH-HHHHHhCCCCh
Confidence 9999999988777666555666555443333221 357777777655544332 22334467764
No 145
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.94 E-value=7.7e-08 Score=86.55 Aligned_cols=45 Identities=20% Similarity=0.012 Sum_probs=37.7
Q ss_pred ccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 020863 216 PVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELV 260 (320)
Q Consensus 216 ~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~ 260 (320)
+....+..|..|++.|+++.|+.+....++..+++.+...+.+..
T Consensus 316 p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~ 360 (400)
T PRK11646 316 PARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLG 360 (400)
T ss_pred ccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHH
Confidence 444577789999999999999999988889888888888877764
No 146
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.94 E-value=7.8e-08 Score=88.94 Aligned_cols=153 Identities=16% Similarity=0.118 Sum_probs=88.6
Q ss_pred CcceeeeehHHHH-HHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcchHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 020863 111 GINTVMYYSPTIV-QMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDH-FGRKKLALSSLAGVIISLVLLSWAFISGSS 188 (320)
Q Consensus 111 ~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr-~grR~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (320)
+++.+..+.+.++ +..|.+..+...... ..........+++|+++|| +|||+.+..+.....++...+... . .
T Consensus 36 ~~y~~~~~l~~yl~~~lg~s~~~a~~~~~-~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~--~--~ 110 (500)
T PRK09584 36 GYYGLQGIMAVYLVKQLGMSEADSITLFS-SFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWS--G--H 110 (500)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh--c--c
Confidence 3444445556555 567776554333322 2222233445689999999 599998877766555444333211 1 0
Q ss_pred CCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccc--hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH
Q 020863 189 ASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQY--RGICGGMSATVNWISNLIVAQTFLTVAELVGTGATF 266 (320)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~--R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 266 (320)
. . ....+...+. ........+....+.+|.||++. |..+.++.+...++++.+++.+...+.+..||...|
T Consensus 111 ----~-~-~~l~~~~~l~-gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F 183 (500)
T PRK09584 111 ----D-A-GIVYMGMATI-AVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAF 183 (500)
T ss_pred ----c-H-HHHHHHHHHH-HHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHH
Confidence 0 0 1111111111 11111223444577899998653 345677777888899999988888888888888888
Q ss_pred HHHHHHHHH
Q 020863 267 LILAGIAVL 275 (320)
Q Consensus 267 ~~~~~~~~~ 275 (320)
.+.+....+
T Consensus 184 ~i~~i~~~i 192 (500)
T PRK09584 184 ALSVVGMLI 192 (500)
T ss_pred HHHHHHHHH
Confidence 775543333
No 147
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.93 E-value=7.3e-08 Score=86.92 Aligned_cols=130 Identities=16% Similarity=0.046 Sum_probs=80.6
Q ss_pred eehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchh
Q 020863 117 YYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 196 (320)
Q Consensus 117 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (320)
...|.+.++.+.+..+.+. ..........++++.+|++.||+|||+.+..+.....++........ ..+ . +.
T Consensus 24 ~l~~~~~~~~~~s~~~~g~-l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~-~~~-----~-~~ 95 (410)
T TIGR00885 24 PMVPQFQQAFTLTAFQAAL-VQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAA-EIM-----N-YT 95 (410)
T ss_pred HHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH-hhc-----c-HH
Confidence 4567788888887665544 44455566789999999999999999998877766555544332111 000 1 11
Q ss_pred HHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 020863 197 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTV 256 (320)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~ 256 (320)
. .+....+.....+ ...+....+..++.|++.|++..++.+....++..+++.+...+
T Consensus 96 ~-~l~~~~l~G~g~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l 153 (410)
T TIGR00885 96 L-FLVGLFILTAGLG-FLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQL 153 (410)
T ss_pred H-HHHHHHHHHhhHH-HHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1111111111111 11122235667888999999999998888888888887766654
No 148
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.93 E-value=5e-08 Score=99.37 Aligned_cols=111 Identities=12% Similarity=0.135 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccch
Q 020863 140 AVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPW 219 (320)
Q Consensus 140 ~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (320)
......+++.+++|+++||+|||+++..+....++..+...+..... . + + .++...++.........+...
T Consensus 55 ~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~------~-~-~-~l~~~r~l~G~~~~~~~~~~~ 125 (1146)
T PRK08633 55 LFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLG------W-F-W-LAFAVTFLLGAQSAIYSPAKY 125 (1146)
T ss_pred HHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHc------c-H-H-HHHHHHHHHHHHHHhhchHHH
Confidence 33444678888999999999999988766544333333322221111 1 1 1 122222222233333445567
Q ss_pred hcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020863 220 TLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAEL 259 (320)
Q Consensus 220 ~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~ 259 (320)
.+.+|.+|.+.|+++.|+......++..+++.+...+...
T Consensus 126 ~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 126 GIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred hhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8899999999999999999988888888887776666554
No 149
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.93 E-value=4e-08 Score=91.51 Aligned_cols=137 Identities=22% Similarity=0.245 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhcccc
Q 020863 136 LLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMG 215 (320)
Q Consensus 136 ~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (320)
.......++..+|+++.|.++||+|||+++..+.....++.+...++- .+...+..-++.+++..+..
T Consensus 122 ~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~------------~~~~~~~~Rfl~G~~~~~~~ 189 (521)
T KOG0255|consen 122 LGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAP------------NYWMFLIFRFLSGFFGSGPL 189 (521)
T ss_pred HHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhC------------cHHHHHHHHHHHHhhccchh
Confidence 334444555789999999999999999998887776666654433221 12234555566677777777
Q ss_pred ccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhcccCC
Q 020863 216 PVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPETQ 288 (320)
Q Consensus 216 ~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~ 288 (320)
.+.+.+..|+++++.|+.+..+ ....+.++.+++.....+.. +|...+++......+..++ +++.||++
T Consensus 190 ~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~ 258 (521)
T KOG0255|consen 190 TVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESP 258 (521)
T ss_pred HHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcCh
Confidence 8888999999999999999888 66666666665554444443 5666666655555544443 45566763
No 150
>PRK10133 L-fucose transporter; Provisional
Probab=98.93 E-value=5.1e-08 Score=88.72 Aligned_cols=137 Identities=19% Similarity=0.188 Sum_probs=76.0
Q ss_pred HHHH-HhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHH
Q 020863 121 TIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIA 199 (320)
Q Consensus 121 ~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (320)
++.+ ..|.+....+. ...+..+.++++.++++++.||+|||+.+..+.....+..... .. . .. . ..
T Consensus 284 ~l~~~~~g~s~~~ag~-~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~--~~-~-~~----~-~~--- 350 (438)
T PRK10133 284 YAVEEIPGMTAGFAAN-YLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLIS--AF-A-GG----H-VG--- 350 (438)
T ss_pred HHhhhcCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH--HH-c-CC----h-HH---
Confidence 4345 35766554443 4445566688999999999999999998765544333222211 11 1 11 0 11
Q ss_pred HHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-chhHHHHHHHHH
Q 020863 200 VIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG-TGATFLILAGIA 273 (320)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~ 273 (320)
+..+.+ ..++.....|..+....|.+|.+ .+++.++.. ....++.+++.+...+.+..| ....|++.....
T Consensus 351 ~~~~~l-~glg~~~i~P~~~s~a~~~~~~~-~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~ 422 (438)
T PRK10133 351 LIALTL-CSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCF 422 (438)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHcccchh-hccchhHHh-HHhccchHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence 111111 12222334566667777888764 455666664 344566667776776667665 455555443333
No 151
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.91 E-value=1.9e-07 Score=83.81 Aligned_cols=150 Identities=15% Similarity=-0.003 Sum_probs=79.2
Q ss_pred hHHHHH-HhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhH
Q 020863 119 SPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGW 197 (320)
Q Consensus 119 ~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (320)
.|.+.+ ..|.+.... ........+..++++++.+++.||.++|+....+.. ..+. .+...... . .+
T Consensus 228 ~~~~~~~~lg~s~~~~-G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~--~~~~~~~~-------~--~~ 294 (393)
T PRK11195 228 VLAWAPVALGITLNQP-AYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLV--VLLMALQH-------S--LL 294 (393)
T ss_pred HHHHHHHHcCCChhHH-HHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHH--HHHHHHHh-------H--HH
Confidence 344444 346655443 334445555678888999999999888876655432 2111 11111110 0 11
Q ss_pred HHHHHHHHHHHHHhccccccchhcccccCCccc-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHH
Q 020863 198 IAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQY-RGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLA 276 (320)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~-R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 276 (320)
..+....+......... +.......|.-|.+. +|++.++.+...+++..++..+.. .....|....+.+.+...+++
T Consensus 295 ~~~~~~~~~G~~~g~~~-~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 372 (393)
T PRK11195 295 PAYPLLILIGALGGFFV-VPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYS-LLVKLGVPVVAVIVGFGLLVA 372 (393)
T ss_pred HHHHHHHHHHHhhhhhh-hhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHH-HHHHcCCCHHHHHHHHHHHHH
Confidence 11122212211111111 222344556656554 788999999888888887776665 345666656666554444445
Q ss_pred HHHHHhh
Q 020863 277 VVFVILF 283 (320)
Q Consensus 277 ~~~~~~~ 283 (320)
..+.+.|
T Consensus 373 ~~~~~~~ 379 (393)
T PRK11195 373 LAMALLW 379 (393)
T ss_pred HHHHHHH
Confidence 4444444
No 152
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.91 E-value=1.2e-07 Score=87.28 Aligned_cols=116 Identities=16% Similarity=0.031 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccch
Q 020863 140 AVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPW 219 (320)
Q Consensus 140 ~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (320)
...+..+++.++.++++||+|+|+....+.....++.+.+....... . ... +..++...+.. .......+..+
T Consensus 274 ~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~--~~~~i~~~l~g-~~~~~~~~~~~ 346 (473)
T PRK10429 274 YAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAA-P---HNA--LLIVIAGILLN-IGTALFWVLQV 346 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccC-c---hhH--HHHHHHHHHHH-HHHHHHHHHHH
Confidence 33345678888899999999999987765544343333322110011 1 111 11111111111 11122334556
Q ss_pred hcccccCC-----ccch--hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 020863 220 TLNSEVYP-----EQYR--GICGGMSATVNWISNLIVAQTFLTVAELVGT 262 (320)
Q Consensus 220 ~~~~ElfP-----~~~R--~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~ 262 (320)
++.+|..+ +..| |...|.......++..+++.+...+.+..|+
T Consensus 347 am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 347 IMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 77888844 5554 3455666777777777777776666555443
No 153
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.91 E-value=3.9e-08 Score=86.97 Aligned_cols=160 Identities=18% Similarity=0.172 Sum_probs=94.9
Q ss_pred eehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----cchHHHH-HHhHHHHHHHHHHHHHHHhcCCCC
Q 020863 117 YYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHF-----GRKKLAL-SSLAGVIISLVLLSWAFISGSSAS 190 (320)
Q Consensus 117 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~-----grR~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 190 (320)
.-.|.+.++.|.+..+.+.... . ..... ..++.|.++||+ |||+..+ .+.....++...+. +.. + .
T Consensus 9 ~~~~~~~~~~g~s~~~~g~~~~-~-~~~~~-~~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~--~~~-~--~ 80 (356)
T TIGR00901 9 NTLPYWLRSKNVSLKTIGFFSL-V-GLPYS-LKFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILS--FLV-P--S 80 (356)
T ss_pred hHHHHHHHHcCCCHHHHHHHHH-H-HHHHH-HHHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHH--cCC-c--c
Confidence 3457888999988766555432 2 22222 378999999998 8888643 33333322222221 111 1 0
Q ss_pred CCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc--------c
Q 020863 191 SSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG--------T 262 (320)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g--------~ 262 (320)
... + .+....+..........+...++.+|.+|++.|+.+.|+......++..+++.+...+....+ |
T Consensus 81 -~~l--~-~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~w 156 (356)
T TIGR00901 81 -TDL--P-LLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLW 156 (356)
T ss_pred -hhH--H-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccc
Confidence 111 1 111111111222222234456788999999999999999888888888888777766666666 7
Q ss_pred hhHHHHHHHHHHHHHHHHHhhcccCC
Q 020863 263 GATFLILAGIAVLAVVFVILFVPETQ 288 (320)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~pet~ 288 (320)
...|.+.+.+.++..+..++..||.+
T Consensus 157 r~~f~i~ai~~l~~~~~~~~~~~e~~ 182 (356)
T TIGR00901 157 GYIFFWTALLILPGLLVTLFLAKEPQ 182 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 77887777666665554444567754
No 154
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.90 E-value=7.2e-09 Score=91.82 Aligned_cols=119 Identities=13% Similarity=0.158 Sum_probs=64.4
Q ss_pred eehHHHHH-HhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcch
Q 020863 117 YYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVY 195 (320)
Q Consensus 117 ~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (320)
.+.|.+++ ..+.+..+.... .....+.+.++.+++|+++||+|||+....+.....++...+... .. .. ..
T Consensus 246 ~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~--~~-~~--~~-- 317 (366)
T TIGR00886 246 SIFAMFFKDQFGLSKVTAGAY-ASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLG--LV-SP--LS-- 317 (366)
T ss_pred HHHHHHHHHHcCCcHHHHHHH-HHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhc--CC-Cc--ch--
Confidence 44555555 457665444333 334455577889999999999999886655443333333222211 11 00 01
Q ss_pred hHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHH
Q 020863 196 GWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWIS 245 (320)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~ 245 (320)
.+.............+.+ .+..+.+.+|++| +.|+++.|+.+..++++
T Consensus 318 ~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 318 LAVFIVLFVALFFFSGAG-NGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHHHHHHHhccc-cchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 111112222222222222 2345677889887 57999999887766554
No 155
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.90 E-value=6.3e-08 Score=87.16 Aligned_cols=165 Identities=18% Similarity=0.347 Sum_probs=100.3
Q ss_pred CcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----cchH-HHHHHhHHHHHHHHHHHHHHH
Q 020863 111 GINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHF-----GRKK-LALSSLAGVIISLVLLSWAFI 184 (320)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~-----grR~-~~~~~~~~~~~~~~~~~~~~~ 184 (320)
.+.....-.|.++++.|.+..+.+....+.. . .+..++.|.++||+ |||+ ++..+.....++...+...
T Consensus 14 ~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~-~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~-- 88 (402)
T PRK11902 14 PLALTSGTLQAWMTVEGLDIQTIGFFSLVGQ-A--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFC-- 88 (402)
T ss_pred hHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH-H--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhc--
Confidence 3333444568899999998777655433322 2 47778999999999 8876 5555444444333332211
Q ss_pred hcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH-hcch
Q 020863 185 SGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAEL-VGTG 263 (320)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~-~g~~ 263 (320)
. .. ... + .+....+....+.....+...++.+|.+|++.|+++.++......++..+++.+...+.+. .||.
T Consensus 89 ~-~~---~~~--~-~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~ 161 (402)
T PRK11902 89 P-PH---AAL--W-PLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWG 161 (402)
T ss_pred C-cc---chH--H-HHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHH
Confidence 1 10 111 1 1111111112223233455568889999999999999998877778888877766666654 4788
Q ss_pred hHHHHHHHHHHHHHHHHHhhcccCC
Q 020863 264 ATFLILAGIAVLAVVFVILFVPETQ 288 (320)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~pet~ 288 (320)
..|.+.+++.++..+ ..++.||++
T Consensus 162 ~~f~i~a~~~l~~~l-~~~~~~e~~ 185 (402)
T PRK11902 162 NTYLLMAGLMLAGAL-TTLWAPEPE 185 (402)
T ss_pred HHHHHHHHHHHHHHH-HHHhcCCCc
Confidence 888877766655444 345667764
No 156
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.89 E-value=1.3e-07 Score=84.80 Aligned_cols=40 Identities=18% Similarity=0.168 Sum_probs=28.3
Q ss_pred cccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHH
Q 020863 215 GPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLT 255 (320)
Q Consensus 215 ~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~ 255 (320)
.+....+..|.+| +.++++.++.+....+++.+++.....
T Consensus 317 ~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~ 356 (394)
T PRK11652 317 FPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAM 356 (394)
T ss_pred HHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444556678887 468889888888888888777665443
No 157
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.89 E-value=2e-07 Score=83.45 Aligned_cols=189 Identities=15% Similarity=0.170 Sum_probs=100.9
Q ss_pred hhhccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHHhC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchH
Q 020863 85 LDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAG-FQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKK 163 (320)
Q Consensus 85 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~ 163 (320)
.+++|+|+....++....+.... .....|.+.++++.| .+... .........++.++.....+++..|+|-|+
T Consensus 201 ~~llk~~~~~~Fll~~~l~~~~~-----~~~~~f~~~yl~~~gg~~~~~-~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ 274 (400)
T PF03825_consen 201 LKLLKNPRFLVFLLAAFLIGISH-----AAYYTFFSIYLQELGGYSGST-IGILWALGVVAEIPFFFFSGRFLKRFGIKW 274 (400)
T ss_pred HHHhcCccHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHcccchhhH-HHHHHHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 46788887765544433322211 222345566788877 43333 233333444556777788899999999998
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhH-HHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHH
Q 020863 164 LALSSLAGVIISLVLLSWAFISGSSASSSGVYGW-IAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVN 242 (320)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~ 242 (320)
++..+....++=...+. .... +....+ +.++...+....++. .......|..+..|++.|++++|+.+...
T Consensus 275 ll~~a~~~~~vR~~l~a----~~~~---~~~~~~~~~~l~q~lhG~tf~~-~~~a~~~yi~~~~p~~~~at~Q~l~~~~~ 346 (400)
T PF03825_consen 275 LLLLALVAYAVRWLLYA----YFSD---PWPFIVALQLLGQLLHGLTFGL-FHAASVRYIDRIAPPELRATAQGLYSALS 346 (400)
T ss_pred HHHHHHHHHHHHHHHHH----HhcC---CcHHHHHHHHHHHhhhhHHHHH-HHHHHHHHHHHhCCccchHHHHHHHHHHH
Confidence 87655443332222211 1100 011111 111111111211111 12233478899999999999999977654
Q ss_pred H-HHHHHHHHHHHHHHHHhcch------hHHHHHHHHHHHHHHHHHhhcccC
Q 020863 243 W-ISNLIVAQTFLTVAELVGTG------ATFLILAGIAVLAVVFVILFVPET 287 (320)
Q Consensus 243 ~-~~~~~~~~~~~~~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~pet 287 (320)
. +++.+++.+-..+.+..|.. ..+.+.+++.++..++..++.+|+
T Consensus 347 ~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 347 FGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred hhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 3 56666776667676665532 334455555555555444455554
No 158
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.88 E-value=4.4e-07 Score=84.12 Aligned_cols=109 Identities=12% Similarity=0.134 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcchHHHH-HHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccc
Q 020863 136 LLSLAVAGTNAVGTIVGIYLIDHFGRKKLAL-SSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGM 214 (320)
Q Consensus 136 ~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (320)
+.+.+......++.++.|.+..+++|-|..+ .+.....+ .... .........+.......+. .+...+.
T Consensus 353 ~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta---~~Ga-ma~~~~~n~~~~i~~~~l~------g~giG~~ 422 (599)
T PF06609_consen 353 WISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTA---FCGA-MAAVRPDNKNAAIAFLVLA------GFGIGGI 422 (599)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHH---HHHH-HHHccCCCcchHHHHHHHH------HHhHHHH
Confidence 3444555555677788889998888766553 22222211 1111 1111111111111111111 1111111
Q ss_pred cccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHH
Q 020863 215 GPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFL 254 (320)
Q Consensus 215 ~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~ 254 (320)
.....+...-..|++.-+++.|+..++-.+|+.++..++.
T Consensus 423 ~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~ 462 (599)
T PF06609_consen 423 LVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYN 462 (599)
T ss_pred HHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 2233345555678888899988888877777766555443
No 159
>PRK09848 glucuronide transporter; Provisional
Probab=98.88 E-value=6.1e-08 Score=88.55 Aligned_cols=162 Identities=12% Similarity=0.062 Sum_probs=82.2
Q ss_pred hhhhccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHH-hCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcch
Q 020863 84 YLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRK 162 (320)
Q Consensus 84 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR 162 (320)
+++++++|.++...+......... .......|++.+. .+. +...............+++.++.+++.||+|+|
T Consensus 221 ~~~l~~n~~f~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~ 294 (448)
T PRK09848 221 LQTLKRNRPLFMLCIGALCVLIST-----FAVSASSLFYVRYVLND-TGLFTVLVLVQNLVGTVASAPLVPGMVARIGKK 294 (448)
T ss_pred HHHHhCCchHHHHHHHHHHHHHHH-----HHHhhhheeeEeeecCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH
Confidence 445777777765544332221111 1111123333332 333 223333323332344567888899999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCcc-------chhhhH
Q 020863 163 KLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQ-------YRGICG 235 (320)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~-------~R~~~~ 235 (320)
+.+..+.....++.+.+.+ ... ... +.......+... ......+..+++.+|..|.+ .+|...
T Consensus 295 ~~~~~g~~~~~i~~~~~~~---~~~----~~~--~~~~~~~~l~g~-G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~ 364 (448)
T PRK09848 295 NTFLIGALLGTCGYLLFFW---VSV----WSL--PVALVALAIASI-GQGVTMTVMWALEADTVEYGEYLTGVRIEGLTY 364 (448)
T ss_pred HHHHHHHHHHHHHHHHHHH---cCc----hhH--HHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhHHhhCccchhHHH
Confidence 9887766554444333221 110 011 111111111111 11122344556667776543 457788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc
Q 020863 236 GMSATVNWISNLIVAQTFLTVAELVG 261 (320)
Q Consensus 236 gi~~~~~~~~~~~~~~~~~~~~~~~g 261 (320)
|+.+....++..+++.+...+.+..|
T Consensus 365 ~~~~~~~klg~aig~~i~g~~l~~~G 390 (448)
T PRK09848 365 SLFSFTRKCGQAIGGSIPAFILGLSG 390 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 88888888888888777766655444
No 160
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.86 E-value=5e-07 Score=82.05 Aligned_cols=163 Identities=18% Similarity=0.237 Sum_probs=91.3
Q ss_pred chhhhccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcch
Q 020863 83 RYLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRK 162 (320)
Q Consensus 83 ~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR 162 (320)
..++++++|..+..+..... ++.+......+.+++.+..-.+....+. ......+...++.++.++++||+|+|
T Consensus 217 ~~~~~~~nr~~~~l~~~~~~-----~~~~~~~~~~~~~y~~~~vl~~~~~~~~-~~~~~~~~~~v~~~~~~~l~~r~gk~ 290 (428)
T PF13347_consen 217 SLRSLFRNRPFRILLLAFFL-----QWLAFALMNTFLPYYFTYVLGNEGLISI-FMLIFFVASIVGSPLWGRLSKRFGKK 290 (428)
T ss_pred chhhhcccchHHHHHHHHHH-----HHhhhhhhhhHHHHHHHHHhcCchhhHH-HHHHHHHHHHHHHHHHHHHHHHccce
Confidence 45677788776654443221 1222233333345555543322233233 33344555788899999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCcc-------chhhhH
Q 020863 163 KLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQ-------YRGICG 235 (320)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~-------~R~~~~ 235 (320)
+....+....+++...+.+... .+ . +...+ ................+++.+|+.+.+ ..|...
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~-~~-----~---~~~~i-~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~ 360 (428)
T PF13347_consen 291 KVYIIGLLLAALGFLLLFFLGP-GS-----P---WLVLI-LFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYF 360 (428)
T ss_pred eehhhhHHHHHHHHHHHHHHHh-hh-----H---HHHHH-HHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHH
Confidence 9887776665555544333211 00 1 11222 222222223344567788888988632 235667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc
Q 020863 236 GMSATVNWISNLIVAQTFLTVAELVG 261 (320)
Q Consensus 236 gi~~~~~~~~~~~~~~~~~~~~~~~g 261 (320)
|+.+....++..+++.+...+.+..|
T Consensus 361 s~~~~~~k~~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 361 SVNSFFIKIGQGLAGAIVGLLLALVG 386 (428)
T ss_pred HhhhhhhHHHHHHHHHHHHHHHHHhC
Confidence 77777777888787777666655544
No 161
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.86 E-value=1.9e-07 Score=84.21 Aligned_cols=103 Identities=13% Similarity=0.099 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcc
Q 020863 143 GTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLN 222 (320)
Q Consensus 143 ~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (320)
....+|.++++++.||+++|+.+......+.++...... ... . . ....+.+ ..++..++.|..+...
T Consensus 280 ~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~----~~~----~-~---~~~~l~~-~glf~s~~fp~i~sl~ 346 (410)
T TIGR00885 280 VIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIF----AGG----H-V---GLYCLTL-CSAFMSLMFPTIYGIA 346 (410)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH----cCC----h-H---HHHHHHH-HHHHHHHHHHHHHHHH
Confidence 446899999999999999999876554444433332221 111 0 1 1111111 1223334457778888
Q ss_pred cccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 020863 223 SEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELV 260 (320)
Q Consensus 223 ~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~ 260 (320)
.+..+++.+..+.++.... +|+.+.|.+...+.+..
T Consensus 347 ~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d~~ 382 (410)
T TIGR00885 347 LKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFIIDMK 382 (410)
T ss_pred HhhhhhhhhhhHHHHHHHH--hccchHHHHHHHHHHHh
Confidence 8999888776566665544 77777788877777743
No 162
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.85 E-value=9.8e-08 Score=88.12 Aligned_cols=159 Identities=16% Similarity=0.282 Sum_probs=96.5
Q ss_pred eehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----cchHH-HHHHhHHHHHHHHHHHHHHHhcCCCC
Q 020863 117 YYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHF-----GRKKL-ALSSLAGVIISLVLLSWAFISGSSAS 190 (320)
Q Consensus 117 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~-----grR~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (320)
...|..+++.|.+..+.+.... ... ..++.++.+.++||+ |||+. +..+.....++...+.. .. + .
T Consensus 33 ~~l~~~l~~~g~~~~~ig~~~~-~~~--~~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~--~~-~--~ 104 (491)
T PRK11010 33 GTLQAWMTVENIDLKTIGFFSL-VGQ--AYVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGF--LE-P--G 104 (491)
T ss_pred HHHHHHHHhCCCCHHHHHHHHH-HHH--HHHHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHH--cC-C--c
Confidence 3456778888877655444321 211 236788999999999 99885 44443333333322221 11 1 0
Q ss_pred CCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHH-HhcchhHHHHH
Q 020863 191 SSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAE-LVGTGATFLIL 269 (320)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~ 269 (320)
.. ..+ +....+...++.....+...++.+|.+|++.|+++.|+.....+++..+++.....+.+ ..||...|.+.
T Consensus 105 -~~-l~~--l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~ 180 (491)
T PRK11010 105 -TQ-LRW--LAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLM 180 (491)
T ss_pred -ch-HHH--HHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHH
Confidence 11 111 11111112222223344556888999999999999999998888888888777776666 46888888887
Q ss_pred HHHHHHHHHHHHhhcccCC
Q 020863 270 AGIAVLAVVFVILFVPETQ 288 (320)
Q Consensus 270 ~~~~~~~~~~~~~~~pet~ 288 (320)
+++.++..+.. ++.||+.
T Consensus 181 a~l~ll~~l~~-~~~~e~~ 198 (491)
T PRK11010 181 AALLIPCIIAT-LLAPEPT 198 (491)
T ss_pred HHHHHHHHHHH-HhcCCCc
Confidence 77766654443 4567764
No 163
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.84 E-value=1.8e-07 Score=85.88 Aligned_cols=132 Identities=9% Similarity=-0.063 Sum_probs=77.2
Q ss_pred HhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhc--CCCCCCcchhHHHHHH
Q 020863 125 MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISG--SSASSSGVYGWIAVIG 202 (320)
Q Consensus 125 ~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 202 (320)
..|.+....+.. ..+..+..+++..+.+.+.+|++.|+++..+.....++........... .....+.. .....
T Consensus 282 ~lG~s~~~~G~~-~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~---~~~~~ 357 (468)
T TIGR00788 282 CLPGGPSFSGMS-KVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEV---FVLGD 357 (468)
T ss_pred cCCCCcchhhhH-HHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCee---eeeeh
Confidence 467766654443 3445566788888888888999999887766554444332211100000 00000111 11111
Q ss_pred HHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 020863 203 LALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG 261 (320)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g 261 (320)
..+..........+. ..+..++.|++.+++..|+.+++.+++..+++..-..+.+..|
T Consensus 358 ~~l~~~~~g~~~~~~-~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 358 SIIAEVLAQLKFMPF-LVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred hHHHHHHHHHHHccH-HHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 111122222222333 5788899999999999999999999999888876666666666
No 164
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.83 E-value=2.9e-07 Score=82.58 Aligned_cols=156 Identities=14% Similarity=0.130 Sum_probs=85.6
Q ss_pred HHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHH-HHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHH
Q 020863 121 TIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLAL-SSLAGVIISLVLLSWAFISGSSASSSGVYGWIA 199 (320)
Q Consensus 121 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (320)
.+.++.+.+..+.+...+.........+.+.+++ +||+|||+.++ .+.....+..... .+.. . +..+.
T Consensus 41 ~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~--~~~~-------~-~~~l~ 109 (393)
T PRK15011 41 FLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLF--AWNR-------N-YFVLL 109 (393)
T ss_pred HHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHH--HHhh-------H-HHHHH
Confidence 3455678776655444333333334456666667 99999998643 3322222222111 1110 0 11111
Q ss_pred HHHHHHHHHHHhccccccchhcccccCCccchh--hhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHH
Q 020863 200 VIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRG--ICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAV 277 (320)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~--~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 277 (320)
+... +. ........+....+..|..|.+.|. ...++.+....++..+++.+...+.+..||...|.+.+...++..
T Consensus 110 ~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~ 187 (393)
T PRK15011 110 FVGV-FL-SSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCG 187 (393)
T ss_pred HHHH-HH-HHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHH
Confidence 1111 11 1112223344455666766665553 233566666778888888777777777899888888777776666
Q ss_pred HHHHhhcccCCC
Q 020863 278 VFVILFVPETQG 289 (320)
Q Consensus 278 ~~~~~~~pet~g 289 (320)
+..++++||.+.
T Consensus 188 ~~~~~~~~~~~~ 199 (393)
T PRK15011 188 VMVWLFLPSMRK 199 (393)
T ss_pred HHHHhhcCccCC
Confidence 666677887643
No 165
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.82 E-value=2.5e-07 Score=81.74 Aligned_cols=162 Identities=19% Similarity=0.180 Sum_probs=93.8
Q ss_pred hcCcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 020863 109 FTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSS 188 (320)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (320)
..++.......|.+.++.+.+..+.+...+ .......++.++.|+++||+|||+.+..+.....++.... . . +
T Consensus 13 ~~~~~~~~~~lp~l~~~~~~s~~~~g~~~s-~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~---~-~-~- 85 (355)
T TIGR00896 13 RPALTSVGPLLPQIRSALGMSFSVAGLLTA-LPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR---S-A-P- 85 (355)
T ss_pred cCccccCcccHHHHHHHhCCCHHHHHHHHH-HHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH---H-h-c-
Confidence 334445556778899999988766555444 4455578999999999999999998876654433332221 1 1 1
Q ss_pred CCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc--chhHH
Q 020863 189 ASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG--TGATF 266 (320)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~ 266 (320)
.. +..++...+.....+ ...+....+..|.+| +.|+++.|+.+....++..+++.+...+.+..+ |...|
T Consensus 86 ----~~--~~l~~~~~~~g~g~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f 157 (355)
T TIGR00896 86 ----GT--ALLFAGTALIGVGIA-IINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQAL 157 (355)
T ss_pred ----cH--HHHHHHHHHHHHHHH-HHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 11 111111111111111 112223345678887 569999999888877888777776666555432 55555
Q ss_pred HHHHHHHHHHHHHHHhhcccCC
Q 020863 267 LILAGIAVLAVVFVILFVPETQ 288 (320)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~pet~ 288 (320)
...++..++.. ..+.|+.+
T Consensus 158 ~~~~~~~~~~~---~~~~~~~~ 176 (355)
T TIGR00896 158 AWWALPALLAL---LAWIPQVR 176 (355)
T ss_pred HHHHHHHHHHH---HHHhhhhc
Confidence 55444333322 23455544
No 166
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.82 E-value=2.7e-07 Score=82.42 Aligned_cols=133 Identities=13% Similarity=0.060 Sum_probs=81.3
Q ss_pred ceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCC
Q 020863 113 NTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSS 192 (320)
Q Consensus 113 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (320)
.....+.|.+.++.|.+..+.+... ........++.++.|+++||+|||+.+..+.....++....... +
T Consensus 23 ~~~~~~lp~~~~~~~~s~~~~G~~~-s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~----~----- 92 (381)
T PRK03633 23 AVLNTLVPLWLAQEHLPTWQVGVVS-SSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLM----V----- 92 (381)
T ss_pred hhHHHHHHHHHHHcCCCHHHHHHHH-HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----c-----
Confidence 3444567888888888765554444 44455578899999999999999998877665554444332221 1
Q ss_pred cchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 020863 193 GVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAE 258 (320)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~ 258 (320)
. + +..++. .+..........+.......+..|++.|+++.|.......++..+++.+...+.+
T Consensus 93 ~-~-~~l~~~-~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~ 155 (381)
T PRK03633 93 G-F-WSWLAW-RFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVST 155 (381)
T ss_pred c-H-HHHHHH-HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 1 1 111111 1221221111223223344577888889999999888888888877776655443
No 167
>PRK09669 putative symporter YagG; Provisional
Probab=98.81 E-value=3.5e-07 Score=83.50 Aligned_cols=111 Identities=17% Similarity=0.209 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhc
Q 020863 142 AGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTL 221 (320)
Q Consensus 142 ~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (320)
.+..+++.++.++++||+|+|+....+.....++...+ .+ .. . +.. +...+...+ .........+..+++
T Consensus 274 ~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~--~~-~~-~---~~~--~~~~~~~~i-~g~~~~~~~~~~~am 343 (444)
T PRK09669 274 MIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALI--FF-IP-P---SNV--WLIFALNIL-FNFIQNLTTPLQWSM 343 (444)
T ss_pred HHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH--HH-hC-c---chH--HHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 34456788888999999999998765544333222111 11 11 1 111 111111111 122222334566788
Q ss_pred ccccCCc-------cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 020863 222 NSEVYPE-------QYRGICGGMSATVNWISNLIVAQTFLTVAELVGT 262 (320)
Q Consensus 222 ~~ElfP~-------~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~ 262 (320)
.+|..+. +..|...|+......++..+++.+...+.+..|+
T Consensus 344 ~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 344 FSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 8888752 2234456666677778887777777666655543
No 168
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.80 E-value=8.5e-07 Score=79.49 Aligned_cols=155 Identities=10% Similarity=0.054 Sum_probs=96.3
Q ss_pred eehHHHHHHhCCCCcH-HHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcch
Q 020863 117 YYSPTIVQMAGFQSNQ-LALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVY 195 (320)
Q Consensus 117 ~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (320)
+-.|.+.++.|++..+ ........ .....+..+.+|+++||+|-|+++..+.+.-.+...++.+.-.
T Consensus 47 ~a~p~L~~elglT~~qv~G~I~s~F-~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~S----------- 114 (511)
T TIGR00806 47 FITPYLLTVLNFTEETVTNEIIPVL-PYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTS----------- 114 (511)
T ss_pred HHHHHHHHHcCCCHHHhcchHHHHH-HHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH-----------
Confidence 4457778888988766 44444433 4447888999999999999999887666555544444433211
Q ss_pred hHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH---HHHHH
Q 020863 196 GWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFL---ILAGI 272 (320)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~~~~ 272 (320)
...+...-++.+.+ .++....+.++...+|++.|+++.|+.++...+|.++++.+... ....||..... +-.+.
T Consensus 115 -l~~L~i~R~llGva-EA~~~A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s 191 (511)
T TIGR00806 115 -VWHMQLMEVFYSVT-MAARIAYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVF 191 (511)
T ss_pred -HHHHHHHHHHHHHH-HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHH
Confidence 11122221111111 12222556788899999999999999999999999988887776 44556544322 22233
Q ss_pred HHHHHHHHHhhcccC
Q 020863 273 AVLAVVFVILFVPET 287 (320)
Q Consensus 273 ~~~~~~~~~~~~pet 287 (320)
..++. +..+++|..
T Consensus 192 ~~~a~-~~a~~LP~~ 205 (511)
T TIGR00806 192 MTFSV-FLALFLKRP 205 (511)
T ss_pred HHHHH-HHHHhCCCC
Confidence 33333 344667743
No 169
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.78 E-value=4.5e-07 Score=82.41 Aligned_cols=166 Identities=17% Similarity=0.196 Sum_probs=110.8
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHH
Q 020863 127 GFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALY 206 (320)
Q Consensus 127 g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (320)
..+..+.+.+.+.... +.+++.+.+|+++||+|-|+++..+.+...++.+++.++..... + .++..-++
T Consensus 69 ~ws~~~k~~i~ss~~~-G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~---------~-~~~~~R~l 137 (466)
T KOG2532|consen 69 DWSSTEKGLIFSSFFW-GYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGF---------Y-LLLVLRFL 137 (466)
T ss_pred cCCHHHHHHHHHHHHH-HHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcc---------h-hhHHHHHH
Confidence 3344444554444433 36788888999999999999988777766666665554432211 1 23334444
Q ss_pred HHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHHHHHHhhc-
Q 020863 207 IAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAEL-VGTGATFLILAGIAVLAVVFVILFV- 284 (320)
Q Consensus 207 ~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~- 284 (320)
++.......+....+.+.-.|++.|++..++..+...++.+++..+-..+.+. .||...|++.+.+.++-.++.+++.
T Consensus 138 qGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~ 217 (466)
T KOG2532|consen 138 QGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYS 217 (466)
T ss_pred hHHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 44433344566667888999999999999999988889988887777777777 8999999998888776655433332
Q ss_pred --cc-CCCCCHHHHHHHHhccc
Q 020863 285 --PE-TQGLTFLEVEQMWKERA 303 (320)
Q Consensus 285 --pe-t~g~~~~~~~~~~~~~~ 303 (320)
|+ .+..+.+|.+..-+++.
T Consensus 218 d~P~~h~~is~~El~~I~~~k~ 239 (466)
T KOG2532|consen 218 DSPSKHPNISEKELKYIEKGKS 239 (466)
T ss_pred CCcccCCCCCHHHHHHHHhccc
Confidence 33 34445566555555544
No 170
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.78 E-value=2.9e-07 Score=83.34 Aligned_cols=160 Identities=13% Similarity=0.111 Sum_probs=79.2
Q ss_pred eehHHHHHH-hCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcch
Q 020863 117 YYSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVY 195 (320)
Q Consensus 117 ~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (320)
.+.|.++++ .|.+..+.+...+ .......++.++.|+++||+|||+.+..+.....+........ ..... .
T Consensus 31 ~~~~~~l~~~~g~s~~~~g~~~s-~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~-~~~~~------~ 102 (420)
T PRK09528 31 SFFPIWLHDINGLSGTDTGIIFS-ANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIY-VFAPL------L 102 (420)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH-HHHHH------H
Confidence 344555554 7887666554444 4555678899999999999999998765433332222211110 00000 0
Q ss_pred hHHHHHHHHHHHHHHhccccccchhcccccCC--ccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHH
Q 020863 196 GWIAVIGLALYIAFFAPGMGPVPWTLNSEVYP--EQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIA 273 (320)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP--~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 273 (320)
.........+.......+.... .....+..+ .+.|+...|.....+.++..+++.+...+.+ .++...|++.+...
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~ 180 (420)
T PRK09528 103 QYNILLGAIVGGIYLGFGFLAG-AGAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSA 180 (420)
T ss_pred HHHHHHHHHHHHHHhhhhhccc-hhhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHH
Confidence 0000111110011111111111 111122222 2235556677777777777777776555544 46667777766665
Q ss_pred HHHHHHHHhhccc
Q 020863 274 VLAVVFVILFVPE 286 (320)
Q Consensus 274 ~~~~~~~~~~~pe 286 (320)
++..+..++..||
T Consensus 181 ~~~~~~~~~~~~~ 193 (420)
T PRK09528 181 LILLVLLFFAKPD 193 (420)
T ss_pred HHHHHHHhccccc
Confidence 5555544444444
No 171
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.78 E-value=2.8e-07 Score=85.13 Aligned_cols=130 Identities=16% Similarity=0.173 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhc
Q 020863 142 AGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTL 221 (320)
Q Consensus 142 ~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (320)
..-.++.++++|.++||++||++++.+-....+....+.+....... ..+. ++.+.+.......-..|.-.++
T Consensus 55 ~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~------~~~~-Ll~~~fl~g~~~a~~~PA~~A~ 127 (524)
T PF05977_consen 55 TLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLL------SPWL-LLILTFLLGIGSAFFNPAWQAI 127 (524)
T ss_pred HHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcC------CHHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 33356778889999999999999887766555444444333222110 1121 1222222222222234566788
Q ss_pred ccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHH
Q 020863 222 NSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVV 278 (320)
Q Consensus 222 ~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 278 (320)
.+|+.|.+....+.++.....++...+|+.+-..+....|...+|.+-+...++..+
T Consensus 128 ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~ 184 (524)
T PF05977_consen 128 IPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISIL 184 (524)
T ss_pred HHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999888999988888888888888777777777766677655444444333
No 172
>PRK10054 putative transporter; Provisional
Probab=98.75 E-value=2.1e-07 Score=83.57 Aligned_cols=117 Identities=14% Similarity=0.108 Sum_probs=67.8
Q ss_pred HHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccC
Q 020863 147 VGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVY 226 (320)
Q Consensus 147 ~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Elf 226 (320)
+.....+++.||.++|+.+..+.....+....+... .. .. +...+....+... .....+....+..+..
T Consensus 259 ~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~-----~~--~~~~~~~~~~~~g-~~~~~p~~~~~~~~~~ 327 (395)
T PRK10054 259 SLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFS---GN-----SL--LLWGMSAAVFTVG-EIIYAPGEYMLIDHIA 327 (395)
T ss_pred eehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHc---ch-----HH--HHHHHHHHHHHHH-HHHHHhhHHHHHHHhC
Confidence 345667899999999987765544333333222111 00 11 1111111111111 1122344456777889
Q ss_pred CccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHH
Q 020863 227 PEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVL 275 (320)
Q Consensus 227 P~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 275 (320)
|++.|+++.|..+ .++++..+++.....+.++.|....|.+.+.+..+
T Consensus 328 p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~ 375 (395)
T PRK10054 328 PPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVA 375 (395)
T ss_pred CcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHH
Confidence 9999998887644 66688888998888888888766666554444433
No 173
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.74 E-value=3.2e-07 Score=81.81 Aligned_cols=137 Identities=23% Similarity=0.219 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhccccc
Q 020863 146 AVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEV 225 (320)
Q Consensus 146 ~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El 225 (320)
.++.++.|+++||+|||+.+..+.....++....... ++......+....+....+..........+....+.+|.
T Consensus 49 ~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~ 124 (394)
T TIGR00883 49 PLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLL----PSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEY 124 (394)
T ss_pred hhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhC----CChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhc
Confidence 4578899999999999998877665555444333221 110000000011112222222222223334456788999
Q ss_pred CCccchhhhHHHHHHHHHHHHHHHHHHHHHHHH--------HhcchhHHHHHHHHHHHHHHHHHhhcccC
Q 020863 226 YPEQYRGICGGMSATVNWISNLIVAQTFLTVAE--------LVGTGATFLILAGIAVLAVVFVILFVPET 287 (320)
Q Consensus 226 fP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~--------~~g~~~~~~~~~~~~~~~~~~~~~~~pet 287 (320)
+|.+.|+...++......++..+++.+...+.. ..+|...|.+.+.+.+++. +.....||+
T Consensus 125 ~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~-~~~~~~~~~ 193 (394)
T TIGR00883 125 APPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGL-YLRRNLEET 193 (394)
T ss_pred CCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHH-HHHHhcCCC
Confidence 999999999988887777777777665443322 3456666665544444332 233445665
No 174
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.73 E-value=3.4e-07 Score=79.89 Aligned_cols=166 Identities=19% Similarity=0.294 Sum_probs=103.7
Q ss_pred CcceeeeehHHHHH-HhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 020863 111 GINTVMYYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSA 189 (320)
Q Consensus 111 ~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (320)
|.+.+..+...+-. ..|.+..+. ....+.....+++|++++|++.||+|-|+++..+.+...+..+ ...+....
T Consensus 267 Gv~til~~~~~fg~~~~gls~~~l-ll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~--~~~~~~~~-- 341 (438)
T COG2270 267 GVNTILAMGGVFGAADLGLSSTEL-LLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAAL--YLIFLEGE-- 341 (438)
T ss_pred hHHHHHHHHHHHHHHHcCccHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHH--HHHHcccc--
Confidence 44444444444444 667766554 3344455566789999999999999999887765543332222 11111110
Q ss_pred CCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-chhHHHH
Q 020863 190 SSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG-TGATFLI 268 (320)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~ 268 (320)
. ......++...+..+..+..-.|..++.|++.-+...|+.+..++..+++++.......+.+| ....+..
T Consensus 342 -----~---~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~ 413 (438)
T COG2270 342 -----L---DFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLS 413 (438)
T ss_pred -----H---HHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHH
Confidence 1 111122222223333445556788999999999999999999999999999999988887766 3445555
Q ss_pred HHHHHHHHHHHHHhhcccCCCC
Q 020863 269 LAGIAVLAVVFVILFVPETQGL 290 (320)
Q Consensus 269 ~~~~~~~~~~~~~~~~pet~g~ 290 (320)
++.+..++.+ .+...|+.+.+
T Consensus 414 i~vll~iGl~-~L~~v~~~~~~ 434 (438)
T COG2270 414 IIVLLLIGLL-LLLRVKVPGRR 434 (438)
T ss_pred HHHHHHhhHh-hEEeecCCCCc
Confidence 5555555554 34556655433
No 175
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.73 E-value=9.3e-07 Score=75.70 Aligned_cols=218 Identities=22% Similarity=0.236 Sum_probs=124.3
Q ss_pred CchHHHHhhhhHHHHHHHHHhhcCCCChHHHHhcCCHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHhccccchhhhc
Q 020863 9 GTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVF 88 (320)
Q Consensus 9 ~~WR~~f~i~~~~~l~~~~~~~~lpESp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 88 (320)
++||....+=+.++++.++.| +.+..|+ +.. ....+..+...+|
T Consensus 162 ~gW~~aL~~WAl~allAl~~W---------lPq~~r~-~~~--------------------------~~~~~~~~~~~vw 205 (395)
T COG2807 162 GGWRGALGFWALLALLALLIW---------LPQALRE-QAA--------------------------SIATKLVSVRKVW 205 (395)
T ss_pred ccHHHHHHHHHHHHHHHHHHH---------hhhcccc-ccc--------------------------ccccccccccccc
Confidence 579999999999999988884 3221111 000 0011112234578
Q ss_pred cchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcchHHHHH
Q 020863 89 KSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDH-FGRKKLALS 167 (320)
Q Consensus 89 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr-~grR~~~~~ 167 (320)
++|..|...+. +.+++ ..+|.+.-|+|.++.+.|.+..+.....+ .....+.+.++..-.+.+| -++|+..+.
T Consensus 206 ~~~~aW~vtLf----mGlqS-~~~Y~~~~WLP~ili~~G~sa~~aG~lls-l~~l~~~~~~ll~P~la~R~~n~r~~~~~ 279 (395)
T COG2807 206 RSPLAWQVTLF----MGLQS-LLYYIVIGWLPAILIDRGLSAAEAGSLLS-LMQLAQLPTALLIPLLARRSKNQRPLVVL 279 (395)
T ss_pred cCchhHHHHHH----HHhhH-HHHHHHHHHHHHHHHHcCCCHHHhhhHHH-HHHHHHHHHHHHHHHHHHHhcccchHHHH
Confidence 88877765443 23333 34556667899999999998766554444 4455588999999999996 456665544
Q ss_pred HhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhccccc-CCccchhhhHHHHHHHHHHHH
Q 020863 168 SLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEV-YPEQYRGICGGMSATVNWISN 246 (320)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El-fP~~~R~~~~gi~~~~~~~~~ 246 (320)
....+.+....+.+. ..+ ....|..+++.. ..+..++....+..= -.++.-+..+|++..++.+.+
T Consensus 280 ~~~~~l~G~~G~~~~--P~~-----~~~lw~~llG~G------~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllA 346 (395)
T COG2807 280 ALLLMLVGLVGLLLA--PGQ-----LPILWALLLGLG------QGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLA 346 (395)
T ss_pred HHHHHHHHHHHHHHh--hhh-----HHHHHHHHHhCc------cchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHH
Confidence 333333333332221 111 111121111111 111122222233222 234455667888899999999
Q ss_pred HHHHHHHHHHHHHhc-chhHHHHHHHHHHHHHHHHH
Q 020863 247 LIVAQTFLTVAELVG-TGATFLILAGIAVLAVVFVI 281 (320)
Q Consensus 247 ~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~ 281 (320)
.++|.++..+-+..| |......++.+.++..+..+
T Consensus 347 a~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl 382 (395)
T COG2807 347 AFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGL 382 (395)
T ss_pred hhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHh
Confidence 999999999988877 55555555555554444433
No 176
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.72 E-value=8.9e-07 Score=79.54 Aligned_cols=163 Identities=12% Similarity=0.132 Sum_probs=79.6
Q ss_pred eehHHHHH-HhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcch
Q 020863 117 YYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVY 195 (320)
Q Consensus 117 ~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (320)
.+.|.+++ +.|.+..+.+.. .........++.+..|+++||+|||+.+..+.....+........ ..... . ...
T Consensus 23 ~~~~~~~~~~~g~s~~~~g~~-~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~-~~~~~-~--~~~ 97 (396)
T TIGR00882 23 PFFPIWLHDVNGLSKTDTGIV-FSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIY-VFGPL-L--QSN 97 (396)
T ss_pred HHHHHHHHHhcCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH-HhhhH-H--HHH
Confidence 34455544 567766555444 445555678899999999999999998765544333222221111 00000 0 000
Q ss_pred hHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHH
Q 020863 196 GWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVL 275 (320)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 275 (320)
.........+..........+....+..|.-+. ++...|.....+.++..+++.+-..+. ..++...|.+.+.+.++
T Consensus 98 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~g~~~g~~~~g~l~-~~~~~~~f~~~~~~~~~ 174 (396)
T TIGR00882 98 ILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSRN--SNFEYGKARMFGCVGWALCASIAGILF-SIDPQIVFWLGSGFALI 174 (396)
T ss_pred HHHHHHHHHHHHHHHhccchhhHHHHHHHhhhh--cccccchhhhhcccHHHHHHHHHhhhh-ccCchHHHHHHHHHHHH
Confidence 011111111111111111122222333343222 233445555666677666666544333 34777788777666666
Q ss_pred HHHHHHhhcccC
Q 020863 276 AVVFVILFVPET 287 (320)
Q Consensus 276 ~~~~~~~~~pet 287 (320)
..++.+...||.
T Consensus 175 ~~~~~~~~~~~~ 186 (396)
T TIGR00882 175 LMLLLMFAKPKA 186 (396)
T ss_pred HHHHHHHhCCCC
Confidence 555444445553
No 177
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.72 E-value=4.9e-07 Score=82.29 Aligned_cols=171 Identities=16% Similarity=0.130 Sum_probs=93.3
Q ss_pred eeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHh----hhcchHHHHHH-hHHHHHHHHHHHHHHHhc----
Q 020863 116 MYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLID----HFGRKKLALSS-LAGVIISLVLLSWAFISG---- 186 (320)
Q Consensus 116 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~D----r~grR~~~~~~-~~~~~~~~~~~~~~~~~~---- 186 (320)
..+.+.+++..|.+.... ........+.+++..++.|+++| |+|||+.++.. .....++...+.+.....
T Consensus 24 ~~~l~~yl~~lg~~~~~~-~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~ 102 (477)
T TIGR01301 24 LSLLTPYVQELGIPHAWA-SIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFG 102 (477)
T ss_pred HHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhcc
Confidence 345555778888865444 33444455567888999999999 59999987653 333333333332211000
Q ss_pred CCCCC-Ccchh-HHHHHHHHHHHHHHhccccccchhcccccCCccch--hhhHHHHHHHHHHHHHHHHHHHHHH--HHHh
Q 020863 187 SSASS-SGVYG-WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYR--GICGGMSATVNWISNLIVAQTFLTV--AELV 260 (320)
Q Consensus 187 ~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R--~~~~gi~~~~~~~~~~~~~~~~~~~--~~~~ 260 (320)
..... ..... +..++++.+..........+ .-++.+|++|++.| +.+.++......+|++++..+.... ....
T Consensus 103 ~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p-~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~ 181 (477)
T TIGR01301 103 DNLDKKTKPRAIIVFVVGFWILDVANNMLQGP-CRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIF 181 (477)
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHHH-HHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhc
Confidence 00000 00111 12222222222222222222 34788999999876 4577776666677776665543321 1111
Q ss_pred -------------cchhHHHHHHHHHHHHHHHHHhhcccCC
Q 020863 261 -------------GTGATFLILAGIAVLAVVFVILFVPETQ 288 (320)
Q Consensus 261 -------------g~~~~~~~~~~~~~~~~~~~~~~~pet~ 288 (320)
+....|++-+.+.+++..+..+..||..
T Consensus 182 ~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 182 PFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred ccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 2345677767777777777778888864
No 178
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.72 E-value=1.1e-07 Score=90.23 Aligned_cols=172 Identities=16% Similarity=0.101 Sum_probs=105.0
Q ss_pred eeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcC-------
Q 020863 115 VMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGS------- 187 (320)
Q Consensus 115 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~------- 187 (320)
...-.+++.+.+++++.+.+.+.+ ...+..+++.++.+++.||.|||+++..+.+..+++.++..+......
T Consensus 52 ~~~~l~~iek~F~lss~~~G~i~s-~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~ 130 (633)
T TIGR00805 52 VNSSLTTIERRFKLSTSSSGLING-SYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTT 130 (633)
T ss_pred HHhhchhhhhhhCCCCCcceeeee-hhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccc
Confidence 334457788888988776554443 445557788899999999999999887777666666555443210000
Q ss_pred -------C---------C----------------CCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhH
Q 020863 188 -------S---------A----------------SSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICG 235 (320)
Q Consensus 188 -------~---------~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~ 235 (320)
+ . .......+..++...++.........+....++.|.+|++.|+...
T Consensus 131 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~ 210 (633)
T TIGR00805 131 VSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYI 210 (633)
T ss_pred ccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHH
Confidence 0 0 0000011222333333444444444566678999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh---------------------c-chhHHHHHHHHHHHHHHHHHhhcccCC
Q 020863 236 GMSATVNWISNLIVAQTFLTVAELV---------------------G-TGATFLILAGIAVLAVVFVILFVPETQ 288 (320)
Q Consensus 236 gi~~~~~~~~~~~~~~~~~~~~~~~---------------------g-~~~~~~~~~~~~~~~~~~~~~~~pet~ 288 (320)
|+......+|..+++.+-..+.... | |...|++.+++.++..+. ++++|++.
T Consensus 211 ~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~-l~~~p~~l 284 (633)
T TIGR00805 211 GILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIP-FFFFPKAL 284 (633)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH-HHhCcccc
Confidence 9988888888777766555444321 1 444566666666555443 45566543
No 179
>PRK10133 L-fucose transporter; Provisional
Probab=98.72 E-value=1.1e-06 Score=79.97 Aligned_cols=130 Identities=16% Similarity=0.054 Sum_probs=76.3
Q ss_pred ceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCC
Q 020863 113 NTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSS 192 (320)
Q Consensus 113 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (320)
.....+.|.+.+..+.+..+.. ...........++.++.|.++||+|||+.+..+.....++.+...... ..+
T Consensus 43 ~~~~~~~p~i~~~~~~s~~~~g-l~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~-~a~----- 115 (438)
T PRK10133 43 NLNDILLPQFQQAFTLTNFQAG-LIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAA-EIM----- 115 (438)
T ss_pred HHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH-hcC-----
Confidence 3344567888888888765544 444555666789999999999999999998877766665554332111 111
Q ss_pred cchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHH
Q 020863 193 GVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQT 252 (320)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~ 252 (320)
. + ...+.+..+.....+ ...+....+..|..|.+.|....++.+....++..+++.+
T Consensus 116 ~-~-~~ll~~r~l~G~g~g-~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~ 172 (438)
T PRK10133 116 N-Y-TLFLVGLFIIAAGLG-CLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVF 172 (438)
T ss_pred C-H-HHHHHHHHHHHHHHH-HHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1 111111111111111 1222333455677777767666777777766777666554
No 180
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.71 E-value=7.8e-07 Score=82.71 Aligned_cols=137 Identities=21% Similarity=0.201 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccc
Q 020863 137 LSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGP 216 (320)
Q Consensus 137 ~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (320)
..........++.+++|.++|++|||+.+..+.+...++.++...+.. ...+...-++..+...+...
T Consensus 94 ~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~------------~~~l~~GR~l~G~g~G~~~~ 161 (513)
T KOG0254|consen 94 LTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPS------------WYQLIVGRILTGLGVGGASV 161 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhh------------HHHHHHHHHHhccchhhhhh
Confidence 344455557899999999999999999988777766666665544320 11222223333332223334
Q ss_pred cchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH--hcchhHHHHHHHHHHHHHHHHHhhcccC
Q 020863 217 VPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAEL--VGTGATFLILAGIAVLAVVFVILFVPET 287 (320)
Q Consensus 217 ~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~pet 287 (320)
+...|.+|+.|++.|+...++....-.++..++ ......... .+|...+.+....+++..+. .+++||+
T Consensus 162 ~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pes 232 (513)
T KOG0254|consen 162 LAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPES 232 (513)
T ss_pred cchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCC
Confidence 556899999999999988777665555444443 322222222 25655555555555544444 6788886
No 181
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.70 E-value=1.7e-07 Score=80.54 Aligned_cols=141 Identities=23% Similarity=0.241 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhcc
Q 020863 134 ALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPG 213 (320)
Q Consensus 134 ~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (320)
+........+.++++++..|.++||+|||+.++.+..+.+++....... . .+ ..+...-+. .....|
T Consensus 70 aGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S--~--------~F--~afv~aR~l-~Gi~kg 136 (451)
T KOG2615|consen 70 AGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALS--R--------NF--AAFVLARFL-GGIFKG 136 (451)
T ss_pred hhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHH--H--------HH--HHHHHHHHh-hhhccC
Confidence 3444445566789999999999999999999887666555543332221 1 11 111111111 222334
Q ss_pred ccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHH---Hhcchh-HH-HHHHHHHHHH-HHHHHhhcccC
Q 020863 214 MGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAE---LVGTGA-TF-LILAGIAVLA-VVFVILFVPET 287 (320)
Q Consensus 214 ~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~---~~g~~~-~~-~~~~~~~~~~-~~~~~~~~pet 287 (320)
.-.+.-++++|+++.+.|+.+.+.....-.+|.++||.+-.++.. ..|... ++ .+++.+..++ .....+++|||
T Consensus 137 nl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpET 216 (451)
T KOG2615|consen 137 NLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPET 216 (451)
T ss_pred chHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 445667899999999999998887776666777777766555444 333211 11 1222222333 44556789998
No 182
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.70 E-value=1.1e-07 Score=83.78 Aligned_cols=140 Identities=16% Similarity=0.226 Sum_probs=68.5
Q ss_pred cceeeeehHHHH----HHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcch-------HHH-HHHhHHHHHHHHHH
Q 020863 112 INTVMYYSPTIV----QMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRK-------KLA-LSSLAGVIISLVLL 179 (320)
Q Consensus 112 ~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR-------~~~-~~~~~~~~~~~~~~ 179 (320)
...+.|+.|... +..+.+.+ ...+...+..+++.+|.+++|.++||+-|+ +.. .........+...+
T Consensus 260 ~Gs~sww~p~~~~~~~~~~~~~~~-~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L 338 (493)
T KOG1330|consen 260 IGSLSWWAPAFIYYSYELIGFDHN-ATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFL 338 (493)
T ss_pred ccccchhhhhHHHHHHHHhCCccc-cchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHH
Confidence 345556666543 33444433 345555566677889999999999995432 221 11122222222222
Q ss_pred HHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHH-HHHHHHH
Q 020863 180 SWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQ-TFLTVAE 258 (320)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~-~~~~~~~ 258 (320)
........ ......+.++.++....+ .++++.. -+..|..|++.|.++.++...+..+.+-.++. +...+.+
T Consensus 339 ~~~~~~~~----~s~~~~~il~~~g~~~~~--~~~a~n~-~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd 411 (493)
T KOG1330|consen 339 FLFPAFTS----SSMIFGLILFLVGETISW--FNWATNN-PIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSD 411 (493)
T ss_pred HHHHhhhh----HHHHHHHHHHHHHHHHHh--ccccccc-ceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHH
Confidence 22211111 111111122222222222 2233332 45568889999999988877665554444333 5555544
Q ss_pred H
Q 020863 259 L 259 (320)
Q Consensus 259 ~ 259 (320)
+
T Consensus 412 ~ 412 (493)
T KOG1330|consen 412 K 412 (493)
T ss_pred H
Confidence 4
No 183
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.70 E-value=1.3e-08 Score=89.37 Aligned_cols=156 Identities=17% Similarity=0.151 Sum_probs=100.9
Q ss_pred HHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHH
Q 020863 122 IVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVI 201 (320)
Q Consensus 122 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (320)
+-+-.+.++.....+ .....+...+.+++.|++.||++||.++..+...-.++.+..... . .-|. +.
T Consensus 59 v~~~fni~~s~~Gll-~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs--~---------~Fwq-~~ 125 (493)
T KOG1330|consen 59 VQTYFNISDSELGLL-QTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFS--N---------HFWQ-VL 125 (493)
T ss_pred HHHhcCCCchhccch-hHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHH--H---------HHHH-HH
Confidence 333456655554444 344445578899999999999999998876655443333332221 0 1122 22
Q ss_pred HHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-chhHHHHHHHHHHHHHHHH
Q 020863 202 GLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG-TGATFLILAGIAVLAVVFV 280 (320)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~ 280 (320)
..-.+.+..-....++...+++|+||...|+++.++-+....+|..++...-..+....+ |.++|...+++.++.++++
T Consensus 126 l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~ 205 (493)
T KOG1330|consen 126 LCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLV 205 (493)
T ss_pred HHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHH
Confidence 222233333334567777899999999999999999888877777665444334444444 7788888888888888878
Q ss_pred HhhcccCCCC
Q 020863 281 ILFVPETQGL 290 (320)
Q Consensus 281 ~~~~pet~g~ 290 (320)
.++.+|....
T Consensus 206 ~~f~~eP~rg 215 (493)
T KOG1330|consen 206 FLFVREPERG 215 (493)
T ss_pred HhhccCcccc
Confidence 8888777543
No 184
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.70 E-value=1.7e-06 Score=80.08 Aligned_cols=150 Identities=19% Similarity=0.181 Sum_probs=89.6
Q ss_pred ehHHHHHH-hCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchh
Q 020863 118 YSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 196 (320)
Q Consensus 118 ~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (320)
.+|.+.++ .+.+....+. .....+++.++|+++.+++.+|++++++...+.+..+++.+.+.+. . . .
T Consensus 240 LlPl~a~~~l~~~a~~yGl-l~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~----~-----~--~ 307 (524)
T PF05977_consen 240 LLPLFARDVLGGGASGYGL-LLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALS----P-----S--F 307 (524)
T ss_pred hhhHHHHHHhCCcHHHHHH-HHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcc----h-----H--H
Confidence 45766654 5555444433 3334455567788888888888888777655554444333332211 0 0 1
Q ss_pred HHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHH
Q 020863 197 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLA 276 (320)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 276 (320)
++.....++...... ..........-+..|.+.||++.++.......+..++..+...+.+..|...++.+.++..+++
T Consensus 308 ~~~~~~l~l~G~~~~-~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~ 386 (524)
T PF05977_consen 308 WLALIALFLAGAAWI-IANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLS 386 (524)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 222222222222111 1122233556688899999999999998888888889999998888888777776655555554
Q ss_pred HHHH
Q 020863 277 VVFV 280 (320)
Q Consensus 277 ~~~~ 280 (320)
.++.
T Consensus 387 ~~~~ 390 (524)
T PF05977_consen 387 ALIA 390 (524)
T ss_pred HHHH
Confidence 4433
No 185
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.70 E-value=4.4e-07 Score=84.09 Aligned_cols=153 Identities=20% Similarity=0.210 Sum_probs=83.6
Q ss_pred hHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHH
Q 020863 119 SPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWI 198 (320)
Q Consensus 119 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (320)
++.+.++.|.+.+. .+..+ .......++.++.|.++|.+|||..++.+.+...++.++..-+ ++ .- .
T Consensus 67 l~~I~~diG~~~~~-~w~~~-~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA----~~-----~~--~ 133 (599)
T PF06609_consen 67 LPYINADIGGSDNW-SWFST-AWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATA----QN-----MN--T 133 (599)
T ss_pred HHHHHHhcCCCccc-hHHHH-HHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcC----Cc-----HH--H
Confidence 46677888876543 44444 4455577888899999999999999887766655555443211 11 00 1
Q ss_pred HHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHH
Q 020863 199 AVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVV 278 (320)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 278 (320)
.+.+..+... +.|.........+|+.|.+.|..+.++.....-.....++..-..+....+|.+.|++.+....++.+
T Consensus 134 ~iag~~l~Gv--gaG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~v 211 (599)
T PF06609_consen 134 FIAGMVLYGV--GAGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALV 211 (599)
T ss_pred HHHHHHHHHH--hhHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHH
Confidence 1122222211 12233344556799999999977665544322222212222222222334688888776655554444
Q ss_pred HH-Hhhccc
Q 020863 279 FV-ILFVPE 286 (320)
Q Consensus 279 ~~-~~~~pe 286 (320)
.. +++.|.
T Consensus 212 l~~~fY~PP 220 (599)
T PF06609_consen 212 LIFFFYFPP 220 (599)
T ss_pred HHHHHhCCC
Confidence 32 334443
No 186
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.67 E-value=5.4e-07 Score=79.83 Aligned_cols=189 Identities=15% Similarity=0.120 Sum_probs=103.7
Q ss_pred hhhhccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHHhCCCC---cHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 020863 84 YLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQS---NQLALLLSLAVAGTNAVGTIVGIYLIDHFG 160 (320)
Q Consensus 84 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~g 160 (320)
..+++|+|+.|...+..+......+. .....+.+......+. +..............++...+..++.+|+|
T Consensus 213 ~~~l~k~~~fw~~~l~v~g~~~~Y~v-----fdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig 287 (412)
T PF01306_consen 213 VLSLFKMRNFWFFVLFVIGVAAIYDV-----FDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIG 287 (412)
T ss_dssp HHHHTTSHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHhcchhHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 45678888888766654433222211 1111233333322211 122233344555567788888999999999
Q ss_pred chHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHH-
Q 020863 161 RKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSA- 239 (320)
Q Consensus 161 rR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~- 239 (320)
.|+.++....++.+=.....+. . .. +.....-.+-..-+.. ......-|+++.+|++..++...+..
T Consensus 288 ~k~~Lllag~i~~iRi~~~~~~--~-------~~--~~i~~~klLH~~e~~l-~lva~fkYI~~~fd~rlsAt~y~v~~~ 355 (412)
T PF01306_consen 288 AKNLLLLAGVIMAIRIIGSGFA--T-------NP--WVISLIKLLHALEFPL-LLVAAFKYITAHFDKRLSATLYLVGFQ 355 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-----------SH--HHHHHHHHHHHHHHHH-HHHHHHHHHHHHS-GGGHHHHHHHHHT
T ss_pred hHhHHHHHHHHHHHHHHHHhhh--c-------ch--HHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCHhHHHHHHHHHHH
Confidence 9998765544333222221111 0 00 1111111111111100 01122468899999999988887753
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhcccCCC
Q 020863 240 TVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPETQG 289 (320)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~g 289 (320)
....++..+.+.....+.+..|+...|.+++++.+...++..+.+++.+.
T Consensus 356 ~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 356 FAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred HHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 44556777777888888899998888988888888777777777765543
No 187
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.65 E-value=4.3e-08 Score=90.08 Aligned_cols=182 Identities=19% Similarity=0.276 Sum_probs=112.3
Q ss_pred hhhccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHH
Q 020863 85 LDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKL 164 (320)
Q Consensus 85 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~ 164 (320)
.++++++.+....+. ......++.....++|.+.++.+.+..+.+...+. .++..+++-++.|++.|+...|+.
T Consensus 292 ~~ll~~~~fl~~~~~-----~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Si-igi~~i~gRi~~G~laD~~~~~~~ 365 (509)
T KOG2504|consen 292 LSLLKDPKFLLLALS-----NLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSI-IGVSDIIGRIILGLLADKPGIRAL 365 (509)
T ss_pred HHHHcCchHHHHHHH-----HHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHH-HHHhhhhhhhhhhhhcCccccchH
Confidence 467777655433222 22223455556677888888999988776666554 456689999999999999884443
Q ss_pred H--HHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHH
Q 020863 165 A--LSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVN 242 (320)
Q Consensus 165 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~ 242 (320)
. ..+.+.++++. +....... +..++..+++..+...........+..|+.+.+.-..+.|+...+.
T Consensus 366 ~~~~~~ll~~gl~~--~~~p~~~~----------~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~ 433 (509)
T KOG2504|consen 366 VLFLLTLLIAGLAR--LFLPFATT----------YVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQ 433 (509)
T ss_pred HHHHHHHHHHHHHH--HHHHHhcc----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHh
Confidence 3 33333333332 11111110 1122222222222222233444467789999998888999999999
Q ss_pred HHHHHHHHHHHHHHHHHhc-chhHHHHHHHHHHHHHHHHHhhcc
Q 020863 243 WISNLIVAQTFLTVAELVG-TGATFLILAGIAVLAVVFVILFVP 285 (320)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~p 285 (320)
.++.++++.+...+.+..| |...|++.+...+++.++ ++..|
T Consensus 434 gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~-~~~~~ 476 (509)
T KOG2504|consen 434 GIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVL-LLILR 476 (509)
T ss_pred HHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHH-HHHhH
Confidence 9999998888887777776 666777776666666653 34444
No 188
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.65 E-value=2.5e-06 Score=76.57 Aligned_cols=155 Identities=19% Similarity=0.229 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccc
Q 020863 139 LAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVP 218 (320)
Q Consensus 139 ~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (320)
.......+++.++...+.+|+|+|++...+.+..+++...+.+. . . +. ...++...+.........++++
T Consensus 279 ~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~---~-~---~~---~~l~~~~~~i~~~g~~~~~~l~ 348 (467)
T COG2211 279 LASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFT---P-A---GS---VVLIVVALIIAGVGTGIANPLP 348 (467)
T ss_pred HHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhh---c-C---cc---hHHHHHHHHHHHHHhhcccccc
Confidence 33344445568888999999999999887765555554443322 1 1 11 1111222122233334557788
Q ss_pred hhcccccC-----Cccchh--hhHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------------hhHHHHH-HHHHHH
Q 020863 219 WTLNSEVY-----PEQYRG--ICGGMSATVNWISNLIVAQTFLTVAELVGT---------------GATFLIL-AGIAVL 275 (320)
Q Consensus 219 ~~~~~Elf-----P~~~R~--~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~---------------~~~~~~~-~~~~~~ 275 (320)
|++.+|.. -|..|. ...|....+.-++..+++.+........|+ ...+.+. +...++
T Consensus 349 wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gyv~~~~~Q~~~al~gI~~~~~~~Pa~l~l~ 428 (467)
T COG2211 349 WAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGYVPNVSAQSASALFGIRFLFIILPALLLLL 428 (467)
T ss_pred HHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99998875 344453 345666667777777777766665554432 1122222 222233
Q ss_pred HHHHHHhhcccCCCCCHHHHHHHHhccccc
Q 020863 276 AVVFVILFVPETQGLTFLEVEQMWKERAWG 305 (320)
Q Consensus 276 ~~~~~~~~~pet~g~~~~~~~~~~~~~~~~ 305 (320)
..+. ..+.|-+ .+++.+|.++.+++...
T Consensus 429 ~~i~-~~~y~L~-~~~~~~I~~eL~~r~~~ 456 (467)
T COG2211 429 AAII-IFFYKLN-EKMHKEIIEELEQRKAA 456 (467)
T ss_pred HHHH-HHhccCC-HHHHHHHHHHHHHHhcc
Confidence 3332 3345444 45567777777776643
No 189
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.64 E-value=1.7e-06 Score=77.55 Aligned_cols=174 Identities=17% Similarity=0.137 Sum_probs=96.4
Q ss_pred HHHhhcCcceeeeehHHHHHHhCCCCcHHHHHH--HHHHHHHHHHHHHHH-HHHHhhhcchHHHHHHhHHHHHHHHHHHH
Q 020863 105 AFQQFTGINTVMYYSPTIVQMAGFQSNQLALLL--SLAVAGTNAVGTIVG-IYLIDHFGRKKLALSSLAGVIISLVLLSW 181 (320)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~l~~-g~l~Dr~grR~~~~~~~~~~~~~~~~~~~ 181 (320)
.+.|...+.....+.|.++++.|.+..+.+... .++ ....++..++. ++..||.|||+..+....... +......
T Consensus 10 y~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~-~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~-~~~~~~~ 87 (390)
T TIGR02718 10 YLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLP-WVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLV-SACLASL 87 (390)
T ss_pred HHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH-HHHHHHHHHHHhccccccCCcchhHHHHHHHHH-HHHHHHH
Confidence 344444444555677889999998876665542 333 33355555554 678999998887543321111 1111111
Q ss_pred HHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 020863 182 AFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG 261 (320)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g 261 (320)
..... . .....+. +. ......++.....+....+..|..+.+.++...+.......+|..+++.....+.+..|
T Consensus 88 ~~~~~--~--~~~~~~~-~~-~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~g 161 (390)
T TIGR02718 88 ALVGP--D--VAGAGWA-VG-LLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFG 161 (390)
T ss_pred HcCCc--c--hhhHHHH-HH-HHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 11110 0 0101111 11 11112222222233444566788888877777776666667777777776667777889
Q ss_pred chhHHHHHHHHHHHHHHHHHhhccc
Q 020863 262 TGATFLILAGIAVLAVVFVILFVPE 286 (320)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~pe 286 (320)
+...|++.+++.++..+..++..|+
T Consensus 162 w~~~f~~~a~l~~~~~~~~~~~~~~ 186 (390)
T TIGR02718 162 QRPAFLLVACVPLASLVCVLWLKDR 186 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9888888887776665555444444
No 190
>PRK11462 putative transporter; Provisional
Probab=98.60 E-value=3.8e-06 Score=77.02 Aligned_cols=28 Identities=14% Similarity=0.065 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhcchHHHHH
Q 020863 140 AVAGTNAVGTIVGIYLIDHFGRKKLALS 167 (320)
Q Consensus 140 ~~~~~~~~~~l~~g~l~Dr~grR~~~~~ 167 (320)
...+..+++.+++++++||+|+|+....
T Consensus 271 ~~~i~~iig~~l~~~l~~r~gkk~~~~~ 298 (460)
T PRK11462 271 TYCVGNLIGSALAKPLTDWKCKVTIFWW 298 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHhChHHHHHH
Confidence 3444567888999999999999987653
No 191
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.56 E-value=5.1e-06 Score=75.71 Aligned_cols=149 Identities=16% Similarity=0.059 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhcc-hHHHHHHhHHHHHHHHHHHHHHHhcC---C------CCCCcch-hHHHHHHHHHHHH
Q 020863 140 AVAGTNAVGTIVGIYLIDHFGR-KKLALSSLAGVIISLVLLSWAFISGS---S------ASSSGVY-GWIAVIGLALYIA 208 (320)
Q Consensus 140 ~~~~~~~~~~l~~g~l~Dr~gr-R~~~~~~~~~~~~~~~~~~~~~~~~~---~------~~~~~~~-~~~~~~~~~~~~~ 208 (320)
...+...+.+++--++.+|+|+ |+....+.+..+++.....+.-...+ . ....... .+..+..+.....
T Consensus 313 ~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi 392 (477)
T TIGR01301 313 LNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGI 392 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhH
Confidence 3333344555666788899984 66767665555555555432211000 0 0000000 0112222222222
Q ss_pred HHhccccccchhcccccCCccch--hhhHHHHHHHHHHHHHHHHHHHHHHHHHhc--chhHHHHHHHHHHHHHHHHHhhc
Q 020863 209 FFAPGMGPVPWTLNSEVYPEQYR--GICGGMSATVNWISNLIVAQTFLTVAELVG--TGATFLILAGIAVLAVVFVILFV 284 (320)
Q Consensus 209 ~~~~~~~~~~~~~~~ElfP~~~R--~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~ 284 (320)
. -.....++|++.++..|++.| |...|+-|..-.+..++.......+.+..| ....+.+-++.++++++.+++.+
T Consensus 393 ~-~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~ 471 (477)
T TIGR01301 393 P-LAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILL 471 (477)
T ss_pred H-HHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhC
Confidence 2 223456788999999986555 667788777776666666655555555555 23455666677778888888899
Q ss_pred ccCCC
Q 020863 285 PETQG 289 (320)
Q Consensus 285 pet~g 289 (320)
|+++.
T Consensus 472 ~~~~~ 476 (477)
T TIGR01301 472 PRPRV 476 (477)
T ss_pred CCCCC
Confidence 98864
No 192
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.53 E-value=3.6e-06 Score=75.29 Aligned_cols=146 Identities=16% Similarity=0.199 Sum_probs=84.9
Q ss_pred eeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCc
Q 020863 114 TVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSG 193 (320)
Q Consensus 114 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (320)
...-+.|.++++.|.+..+.+...+.. .....++.++.+.++||+|||............ ...+... ...+ .
T Consensus 22 ~~~p~l~~~l~~~g~s~~~ig~~~s~~-~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~-l~~~~~~-~~~~-----~ 93 (382)
T TIGR00902 22 IFLPFFPAWLKGIGLGEEMIGLLIGAA-LIARFAGGLFFAPLIKDANHIIIALRLLALASA-IFAAAFS-AGAH-----N 93 (382)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH-HHHHHHH-Hhhh-----h
Confidence 334567788899998776665544433 444678888999999999986543211111111 1111111 0110 1
Q ss_pred chhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHH
Q 020863 194 VYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGI 272 (320)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 272 (320)
. +..++...+...+ .....+....+..|. .+.|++..|.....+.++..+++.....+.+..||...|.+....
T Consensus 94 ~--~~l~~~~~l~~~~-~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~ 167 (382)
T TIGR00902 94 A--WLLFIAIGLFALF-FSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAG 167 (382)
T ss_pred H--HHHHHHHHHHHHH-HccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHH
Confidence 1 1222222222222 222344555555442 466888899988888899988888888888888888777665544
No 193
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.52 E-value=3.4e-07 Score=79.13 Aligned_cols=140 Identities=20% Similarity=0.176 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccch
Q 020863 140 AVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPW 219 (320)
Q Consensus 140 ~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (320)
.-...+.+.+++.|.++||+|+|..++.++..+..+.+++.+.- + +. .+...-..++...........
T Consensus 114 skA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~----s------y~--~l~vAR~LQgvgsA~~~tsgl 181 (464)
T KOG3764|consen 114 SKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGN----S------YP--MLFVARSLQGVGSAFADTSGL 181 (464)
T ss_pred HHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcc----h------hH--HHHHHHHHhhhhHHHHHhhhH
Confidence 44455788889999999999999998888777766666544321 1 01 122222222222222233345
Q ss_pred hcccccCCccc-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhcccCCCCC
Q 020863 220 TLNSEVYPEQY-RGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPETQGLT 291 (320)
Q Consensus 220 ~~~~ElfP~~~-R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~g~~ 291 (320)
++.++.||.+. |+++.|+.-....+|.++++.+-..+.+..|...+|+++++++++...+.++.++.++..+
T Consensus 182 amlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~ 254 (464)
T KOG3764|consen 182 AMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDP 254 (464)
T ss_pred HHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCc
Confidence 78889999877 7999999988888888888887777888899999999999999988888777776665443
No 194
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.51 E-value=1.4e-06 Score=79.28 Aligned_cols=164 Identities=20% Similarity=0.181 Sum_probs=88.5
Q ss_pred ehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhh----hcchH-HHHHHhHHHHHHHHHHHHHHHhcCCCCCC
Q 020863 118 YSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDH----FGRKK-LALSSLAGVIISLVLLSWAFISGSSASSS 192 (320)
Q Consensus 118 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr----~grR~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (320)
..+++.+..|.+....+.. .....+..++..++.|+++|| +|||+ .++.+.....++...+.. . +.....
T Consensus 22 l~~~~~~~~g~s~~~~g~i-~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~---~-~~~~~~ 96 (437)
T TIGR00792 22 LLFFYTDVLGLSAAFVGTL-FLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFT---T-PDFSAT 96 (437)
T ss_pred HHHHHHHccCCCHHHHHHH-HHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHh---C-CCCCcc
Confidence 3445556678876554443 334445578889999999998 67755 444444433333332221 1 111111
Q ss_pred cchhHHHHHHHHHHHHHHhccccccchhcccccC-CccchhhhHHHHHHHHHHHHHHHHHHHHHHHH-------Hhcchh
Q 020863 193 GVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVY-PEQYRGICGGMSATVNWISNLIVAQTFLTVAE-------LVGTGA 264 (320)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Elf-P~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~-------~~g~~~ 264 (320)
....+ ......++...... ......++.+|+. +++.|++..+.....+.+++.+++.+..++.. ..+|..
T Consensus 97 ~~~~~-~~~~~~~~~~~~~~-~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~ 174 (437)
T TIGR00792 97 GKLVY-AYITYILLGLFYSF-VNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFM 174 (437)
T ss_pred hHHHH-HHHHHHHHHHHHHh-hcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHH
Confidence 11111 11111222222221 1122246677887 46789999888887777777766655444433 234555
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCC
Q 020863 265 TFLILAGIAVLAVVFVILFVPETQ 288 (320)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~pet~ 288 (320)
.+.+.+++.++..+..++..||++
T Consensus 175 ~~~i~~~l~~~~~~~~~~~~~e~~ 198 (437)
T TIGR00792 175 FALVLALIGVVSLIICFFGTKERY 198 (437)
T ss_pred HHHHHHHHHHHHHHHHHcCCEecC
Confidence 666666666666665666677754
No 195
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.49 E-value=5.2e-06 Score=74.21 Aligned_cols=160 Identities=16% Similarity=0.206 Sum_probs=88.1
Q ss_pred eeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhH-HHHHHHHHHHHHHHhcCCCCCC
Q 020863 114 TVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLA-GVIISLVLLSWAFISGSSASSS 192 (320)
Q Consensus 114 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 192 (320)
....+.|.++++.|.+..+.+...+. ......++.++.|.++||+|||........ ...+.. +. ..... +
T Consensus 22 ~~~p~l~~~l~~~g~s~~~iG~~~~~-~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~--~~--~~~~~----~ 92 (382)
T PRK11128 22 VFLPFWSVWLKGQGYTPETIGLLLGA-GLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFA--VA--FWFGA----H 92 (382)
T ss_pred HHhhhHHHHHHhcCCCHHHHHHHHHH-HHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHH--HH--HHHhc----c
Confidence 33456677888888876665555444 445567889999999999999532211111 111111 11 11110 1
Q ss_pred cchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHH
Q 020863 193 GVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGI 272 (320)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 272 (320)
.. +..++...+. ........+...++..+. .+.|+.+.|.....+.++..+++.+-..+.+..|+...|++.++.
T Consensus 93 ~~--~~l~i~~~l~-g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~ 167 (382)
T PRK11128 93 SF--WLLFVAIGLF-NLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAG 167 (382)
T ss_pred cH--HHHHHHHHHH-HHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHH
Confidence 11 1122222212 222222334444555554 344677777777778888888888888888888888887766554
Q ss_pred HHHHHHHHHhhcccCC
Q 020863 273 AVLAVVFVILFVPETQ 288 (320)
Q Consensus 273 ~~~~~~~~~~~~pet~ 288 (320)
.++..+ ..++.||.+
T Consensus 168 ~~~~~~-~~~~~~~~~ 182 (382)
T PRK11128 168 VASMLL-GQLLRPTIM 182 (382)
T ss_pred HHHHHH-HHHccCCCC
Confidence 443333 334556543
No 196
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.48 E-value=5.6e-06 Score=76.29 Aligned_cols=161 Identities=16% Similarity=0.199 Sum_probs=102.8
Q ss_pred eeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcc
Q 020863 115 VMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGV 194 (320)
Q Consensus 115 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (320)
...+.+.+.+..+.+..+.++..++.... ..+..++.+.+.||+|.|.+.+.+...+.++.+...+.. ..
T Consensus 65 ~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~-~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~---------~i 134 (509)
T KOG2504|consen 65 FGLLFEELMDYFGSSSSQIAWIGSLLLGV-YLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFAT---------SL 134 (509)
T ss_pred ehhhHHHHHHHhCCCccHHHHHHHHHHHH-HHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHh---------hH
Confidence 33456778888888777666666655444 677788889999999999988877766666555443321 11
Q ss_pred hhHHHHHHHHHH-HHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHH
Q 020863 195 YGWIAVIGLALY-IAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIA 273 (320)
Q Consensus 195 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 273 (320)
+-..+...+. ...+++...+. ..+.+..| .+.|+.+.|++....-++.++-+.+.-.+.+..||...+.+++.+.
T Consensus 135 --~~l~lt~gvi~G~G~~~~~~pa-iviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~ 210 (509)
T KOG2504|consen 135 --WQLYLTFGVIGGLGLGLIYLPA-VVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGIS 210 (509)
T ss_pred --HHHHHHHHHHhhccchhhhcch-hhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 1122222221 11111122222 23444444 5669999998887766776666666667778889999999988888
Q ss_pred HHHHHHHHhhcccCCC
Q 020863 274 VLAVVFVILFVPETQG 289 (320)
Q Consensus 274 ~~~~~~~~~~~pet~g 289 (320)
+-..+....+.|.+..
T Consensus 211 l~~~~~~~~~rp~~~~ 226 (509)
T KOG2504|consen 211 LNVLVAGALLRPLSPP 226 (509)
T ss_pred HHHHHHHHHcCCCCcC
Confidence 7777777777774433
No 197
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.46 E-value=1.3e-05 Score=69.84 Aligned_cols=171 Identities=22% Similarity=0.267 Sum_probs=93.2
Q ss_pred chhhhccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHHH-hCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 020863 83 RYLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGR 161 (320)
Q Consensus 83 ~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~gr 161 (320)
...+++++|+.+...+... +....+. ....|+++++.+ .|.+..+.+...+.. .++..+|-+++.++..|+..
T Consensus 228 ~~~~l~~~~~~~~gvl~~F-lYVG~Ev----a~gsfl~~y~~~~~g~~~~~aa~~~s~~-~~~~~vGRFig~~lm~~~~~ 301 (422)
T COG0738 228 GLSSLFQNKHLRLGVLAIF-LYVGAEV----AIGSFLVSYLEELLGLNEQQAAYYLSFF-WVGFMVGRFIGSALMSRIKP 301 (422)
T ss_pred hHHHHHhChHHHHHHHHHH-HHHhHHH----HHHHHHHHHHHhcCCccHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCH
Confidence 4567888888877655422 2221111 223456666666 565555555554444 44478999999999999998
Q ss_pred hHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHH
Q 020863 162 KKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATV 241 (320)
Q Consensus 162 R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~ 241 (320)
.+.+........+.++.. .+.. ...+...+. ....+...+.|..+....+..|.+.. .+++ ....
T Consensus 302 ~k~Laf~a~~~ill~~~~--~l~~-------g~v~~~~l~----~ig~F~simfPTIfslal~~l~~~ts-~~s~-~l~m 366 (422)
T COG0738 302 EKYLAFYALIAILLLLAV--ALIG-------GVVALYALF----LIGLFNSIMFPTIFSLALKNLGEHTS-VGSG-LLVM 366 (422)
T ss_pred HHHHHHHHHHHHHHHHHH--HHhc-------ChHHHHHHH----HHHHHhHHHHHHHHHHHHhccCcccc-ccce-eeee
Confidence 887765443322222211 1111 111111122 22334445677778888888884333 2322 2333
Q ss_pred HHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Q 020863 242 NWISNLIVAQTFLTVAELVGTGATFLILAGIAV 274 (320)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 274 (320)
+-+|+.+.|.+...+.+..|....+...-.++.
T Consensus 367 aivGGAiiP~l~G~i~d~~g~~~~~~~~pllc~ 399 (422)
T COG0738 367 AIVGGAIIPPLQGVIADMFGIQLTFLIVPLLCY 399 (422)
T ss_pred heecchHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 446666778888878887775544443333333
No 198
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.43 E-value=1.6e-09 Score=99.02 Aligned_cols=139 Identities=20% Similarity=0.196 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccc
Q 020863 139 LAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVP 218 (320)
Q Consensus 139 ~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (320)
....++..+|++++|+++||+|||+.+..+.....++.+........ . . ...+....++.++...+..+..
T Consensus 53 ~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~----~--~---~~~~~~~R~~~G~~~g~~~~~~ 123 (451)
T PF00083_consen 53 SSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSY----N--N---FWMLLIGRFLIGFGIGGAYVVS 123 (451)
T ss_pred HHHHhhhcccccccccccccccccccccccccccccccccccccccc----c--c---cccccccccccccccccccccc
Confidence 34445567899999999999999998877666555554443322100 0 0 1112222222233333345566
Q ss_pred hhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc---chhHHHHHHHHHHHHHHHHHhhcccC
Q 020863 219 WTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG---TGATFLILAGIAVLAVVFVILFVPET 287 (320)
Q Consensus 219 ~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~pet 287 (320)
..+..|..|++.|+...++......+|..++...........+ |...+.+.+...++. ++..+++||+
T Consensus 124 ~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~-~~~~~~~pES 194 (451)
T PF00083_consen 124 PIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLV-LLLRFFLPES 194 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccc
Confidence 7899999999999888777665554554444333222222222 444444434443333 3345778998
No 199
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.40 E-value=2e-05 Score=65.45 Aligned_cols=137 Identities=22% Similarity=0.202 Sum_probs=80.0
Q ss_pred cceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCC
Q 020863 112 INTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASS 191 (320)
Q Consensus 112 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (320)
.+....|.|.+.+..+.+..+.... .....+...+ .+.+|.+.|++|.|..+..+.....++...+...+... ...
T Consensus 18 ~Y~Fs~yS~~Lk~~l~~sq~~l~~l-~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~-i~~- 93 (250)
T PF06813_consen 18 TYTFSAYSPQLKSRLGYSQSQLNTL-STAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGR-IPS- 93 (250)
T ss_pred ccchhhhhHHHHHHhCCCHHHHHHH-HHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCc-cCc-
Confidence 3455678999999999876554433 3333333344 47889999999999988887777666665554443222 111
Q ss_pred CcchhHHHHHHHHHHHHHHhccc-cccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 020863 192 SGVYGWIAVIGLALYIAFFAPGM-GPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVA 257 (320)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~ 257 (320)
.. .| ..++..+....+..+ .........+-||. .||++.|+.-...-+++.+-+.++....
T Consensus 94 ~~--~~--~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f 155 (250)
T PF06813_consen 94 LP--VW--LMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFF 155 (250)
T ss_pred cc--hH--HHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHc
Confidence 11 11 112222111111111 12222344578985 6999999988877777766666555443
No 200
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.34 E-value=9.5e-06 Score=74.20 Aligned_cols=162 Identities=19% Similarity=0.158 Sum_probs=104.4
Q ss_pred HhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHH
Q 020863 125 MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLA 204 (320)
Q Consensus 125 ~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (320)
+.++..++..... ....+..+++.+.++++.||+.-.+.+....+...+..+.... .. ..-.+++.-
T Consensus 75 dl~~~~~~l~~~~-t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~--~~----------s~~~~ialr 141 (495)
T KOG2533|consen 75 DLKLVGNQLGVLD-TVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAA--VH----------SFPGLIALR 141 (495)
T ss_pred ccchhhhhhhhHH-HHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHH--Hh----------hhHHHHHHH
Confidence 3344444444444 4455568999999999999999444433222211111111111 11 011233334
Q ss_pred HHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHH------HhcchhHHHHHHHHHHHHHH
Q 020863 205 LYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAE------LVGTGATFLILAGIAVLAVV 278 (320)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~~~~~~~~~~~ 278 (320)
++.+.+-.+..|....+.+--|..+.|++-.|+-.+.+.+++++++.+-..+.+ ..||.+.|++-++++++.++
T Consensus 142 ~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi 221 (495)
T KOG2533|consen 142 FLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGI 221 (495)
T ss_pred HHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHh
Confidence 444445555566666888999999999999999998888999888887766532 35788999999999999998
Q ss_pred HHHhhcccCCC--CCHHHHHHHH
Q 020863 279 FVILFVPETQG--LTFLEVEQMW 299 (320)
Q Consensus 279 ~~~~~~pet~g--~~~~~~~~~~ 299 (320)
++++++|+..- +-++|.|+.+
T Consensus 222 ~~f~~lp~~P~~~~fl~~~ek~~ 244 (495)
T KOG2533|consen 222 VVFFFLPDNPSKAWFLTDEEKEL 244 (495)
T ss_pred eEEEEecCChhhccccchHHHHH
Confidence 88899987544 4455555433
No 201
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.28 E-value=1.2e-05 Score=71.98 Aligned_cols=142 Identities=18% Similarity=0.134 Sum_probs=85.5
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHH
Q 020863 128 FQSNQLALLLSLAVAGTNAVGTIVGIYLIDH-FGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALY 206 (320)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr-~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (320)
++.++........... --...+++||++|| +|+|+.+..+.+..+++.+.+...- ....... ++.+..+
T Consensus 58 ~~~~~A~~l~~~y~sl-VY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~----~~~~~gl--~i~L~~I--- 127 (498)
T COG3104 58 FDETHATGLFSAYGSL-VYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISS----VSGPGGL--YIGLALI--- 127 (498)
T ss_pred cChHhhHHHHHHHHHH-HHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccc----cccccHH--HHHHHHH---
Confidence 6554433333322222 24667899999999 8999998887777666665543321 0000111 1111111
Q ss_pred HHHHhccccccchhcccccCCccc--hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHH
Q 020863 207 IAFFAPGMGPVPWTLNSEVYPEQY--RGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFV 280 (320)
Q Consensus 207 ~~~~~~~~~~~~~~~~~ElfP~~~--R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 280 (320)
.......=+....+..|++|++. |-.+.++-....++|+++++.+.+.+....|++..|...+.-+.++.+..
T Consensus 128 -~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f 202 (498)
T COG3104 128 -IVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIF 202 (498)
T ss_pred -HhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHH
Confidence 11111222344567889997644 33345555556678899999999999999999888888777777766643
No 202
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.27 E-value=2.1e-06 Score=78.01 Aligned_cols=164 Identities=17% Similarity=0.155 Sum_probs=89.3
Q ss_pred ehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHh----hhcchHHHH-HHhHHHHHHHHHHHHHHHhcCCCCCC
Q 020863 118 YSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLID----HFGRKKLAL-SSLAGVIISLVLLSWAFISGSSASSS 192 (320)
Q Consensus 118 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~D----r~grR~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (320)
..+++.+..|++....+. .....-+..++..++.|+++| |+|||+..+ .+.....++...+... ........
T Consensus 24 ~~~f~~~~~gl~~~~~g~-i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~--~p~~~~~~ 100 (428)
T PF13347_consen 24 LLYFYTDVLGLSPALAGL-ILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSP--PPAGLSFT 100 (428)
T ss_pred HHHHHHHHcCCCHHHHHH-HHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhcc--ccchhhhh
Confidence 345556667887644433 333334446677778999999 899887543 3434333333332211 01011111
Q ss_pred cchhHHHHHHHHHHHHHHhccccccchhcccccCCc-cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-------chh
Q 020863 193 GVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPE-QYRGICGGMSATVNWISNLIVAQTFLTVAELVG-------TGA 264 (320)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~-~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g-------~~~ 264 (320)
....+. .+...++..++... .....++.+|+.++ +.|.+..+.....+.+++.+...+.+.+....| +..
T Consensus 101 ~~~~~~-~~~~~l~~~~~t~~-~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~ 178 (428)
T PF13347_consen 101 AKLVWL-FVFYILFDIAYTFV-QIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRW 178 (428)
T ss_pred hHHHHH-HHHHHHHHHhhhhc-cCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHH
Confidence 111121 22222232332222 22235788999985 679999998888888888766666665554433 333
Q ss_pred HHHHHHHHHHHHHHHHHhhccc
Q 020863 265 TFLILAGIAVLAVVFVILFVPE 286 (320)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~pe 286 (320)
...+++++..++.++.++..+|
T Consensus 179 ~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 179 MALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred HHHHHHHHHHHHhhhhhheeee
Confidence 4455556666666666667777
No 203
>PRK09669 putative symporter YagG; Provisional
Probab=98.24 E-value=3e-05 Score=70.84 Aligned_cols=160 Identities=14% Similarity=0.170 Sum_probs=81.3
Q ss_pred HHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhh----hcchH-HHHHHhHHHHHHHHHHHHHHHhcCCCCCCcc
Q 020863 120 PTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDH----FGRKK-LALSSLAGVIISLVLLSWAFISGSSASSSGV 194 (320)
Q Consensus 120 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr----~grR~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (320)
.++.+..|.+....+. .....-+..++..++.|+++|| +|||+ .++.+.....++...+ +.. +.......
T Consensus 34 ~~~t~~~gls~~~~g~-i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~---f~~-p~~~~~~~ 108 (444)
T PRK09669 34 YFYTDVFGLSAAIMGT-MFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLT---FYT-PDFGATGK 108 (444)
T ss_pred HHHHHhcCCCHHHHHH-HHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHH---HhC-CCCCcchH
Confidence 3445567887655433 3334444577888999999998 77755 4444433333333222 111 11111111
Q ss_pred hhHHHHHHHHHHHHHHhccccccchhcccccC-CccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-------cchhHH
Q 020863 195 YGWIAVIGLALYIAFFAPGMGPVPWTLNSEVY-PEQYRGICGGMSATVNWISNLIVAQTFLTVAELV-------GTGATF 266 (320)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Elf-P~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~-------g~~~~~ 266 (320)
..+. .+...++...+.. ......++.+|+. +++.|.+..+.....+.+++.+++....++.... ++...+
T Consensus 109 ~~~~-~~~~~l~~~~~t~-~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~ 186 (444)
T PRK09669 109 IIYA-CVTYILLSLVYTA-INVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAM 186 (444)
T ss_pred HHHH-HHHHHHHHHHHHh-hcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHH
Confidence 1111 1111222222221 2222346778987 4577988888888888887777666554444333 233344
Q ss_pred HHHHHHHHHHHHHHHhhccc
Q 020863 267 LILAGIAVLAVVFVILFVPE 286 (320)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~pe 286 (320)
.+++++.++..+.+++..+|
T Consensus 187 ~i~~ii~~v~~~~~~~~~~e 206 (444)
T PRK09669 187 MVMGLLGVVLFFCCFFMTKE 206 (444)
T ss_pred HHHHHHHHHHHHHHhCCeEE
Confidence 44555555544444444444
No 204
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.20 E-value=4.1e-05 Score=63.68 Aligned_cols=125 Identities=17% Similarity=0.125 Sum_probs=77.8
Q ss_pred HHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHH-HHHHHHHHHHHhcCCCCCCcchhHHHH
Q 020863 122 IVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVI-ISLVLLSWAFISGSSASSSGVYGWIAV 200 (320)
Q Consensus 122 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (320)
+.+..|+++.......+.+..+ .++.+++.|.++||.||+...+.+..... ++-..+.+++ . ..++..
T Consensus 291 F~~rfGlS~~~a~~i~s~vy~I-sav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~--l--------sPy~~m 359 (459)
T KOG4686|consen 291 FQKRFGLSAVSAGNILSTVYGI-SAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFTF--L--------SPYTSM 359 (459)
T ss_pred HHHhhCCChhhccchhhhhhhh-hhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhhh--c--------cHHHHH
Confidence 4556898877666666666555 67888899999999999987665433222 2222222211 1 113333
Q ss_pred HHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 020863 201 IGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG 261 (320)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g 261 (320)
....+.....+. ..|...+-+.|.+.-|++.|.+.++.+++-.+.+.+...+.+.-|
T Consensus 360 ~~lGLsysllAc----slWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g 416 (459)
T KOG4686|consen 360 TFLGLSYSLLAC----SLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDG 416 (459)
T ss_pred HHHhhhHHHHHH----HHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCC
Confidence 222222222222 235556778899999999999999999998777776666555444
No 205
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.18 E-value=8.6e-05 Score=67.51 Aligned_cols=137 Identities=21% Similarity=0.248 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhcc
Q 020863 143 GTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLN 222 (320)
Q Consensus 143 ~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (320)
...++.+..-|.++||+|||..+......+.+..+.+.+.- .|..+ ...+...+. .......++.
T Consensus 73 ~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~------------~~~~~-~~~l~g~~~--~~~s~~~a~v 137 (463)
T KOG2816|consen 73 LLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG------------YWFFL-LLGLSGGFS--AIFSVGFAYV 137 (463)
T ss_pred HHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH------------HHHhh-hcccccchh--hhhhhhhhhe
Confidence 33567788889999999999987766555544443332221 01111 111111111 1123345788
Q ss_pred cccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhcccCCCCCHHH
Q 020863 223 SEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPETQGLTFLE 294 (320)
Q Consensus 223 ~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~g~~~~~ 294 (320)
++....+.|....|+.+..-..+..+++..-....+..|...+|.+-++..++..++..+++||+..++.++
T Consensus 138 adis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~ 209 (463)
T KOG2816|consen 138 ADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERS 209 (463)
T ss_pred eeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccc
Confidence 899999999999999888766777777777777777778777888888888888888889999997776554
No 206
>PRK11462 putative transporter; Provisional
Probab=98.14 E-value=0.00016 Score=66.43 Aligned_cols=160 Identities=14% Similarity=0.139 Sum_probs=82.1
Q ss_pred HHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhh----hcchHHH-HHHhHHHHHHHHHHHHHHHhcCCCCCCcch
Q 020863 121 TIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDH----FGRKKLA-LSSLAGVIISLVLLSWAFISGSSASSSGVY 195 (320)
Q Consensus 121 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr----~grR~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (320)
++....|++....+. ..++.-+..++.-++.|+++|| +|||+.. +.+....+++...+ +. .+........
T Consensus 35 fyt~~~Gl~~~~~g~-i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~ll---f~-~p~~s~~~~~ 109 (460)
T PRK11462 35 FYTDIFGIPAGFVGT-MFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLA---YS-TPDLSMNGKM 109 (460)
T ss_pred HHHHhhCCCHHHHHH-HHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHH---Hh-CCCCCcchHH
Confidence 344556776544333 3334444467888999999996 6887644 44433333333222 11 1111111111
Q ss_pred hHHHHHHHHHHHHHHhccccccchhcccccCC-ccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-------chhHHH
Q 020863 196 GWIAVIGLALYIAFFAPGMGPVPWTLNSEVYP-EQYRGICGGMSATVNWISNLIVAQTFLTVAELVG-------TGATFL 267 (320)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP-~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g-------~~~~~~ 267 (320)
.+. .+...++...+... ..-.+++.+|+.+ ++.|++..+.-...+.+++.+++.+..++....| +.....
T Consensus 110 ~y~-~~~~~~~~~~~t~~-~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~ 187 (460)
T PRK11462 110 IYA-AITYTLLTLLYTVV-NIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIA 187 (460)
T ss_pred HHH-HHHHHHHHHHHHHH-hccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHH
Confidence 121 12222222222221 1222467889876 6789999998888888887777666555544433 222333
Q ss_pred HHHHHHHHHHHHHHhhcccC
Q 020863 268 ILAGIAVLAVVFVILFVPET 287 (320)
Q Consensus 268 ~~~~~~~~~~~~~~~~~pet 287 (320)
+++.+.+++..+++...+|.
T Consensus 188 i~~ii~~i~~~i~~~~~kE~ 207 (460)
T PRK11462 188 VLSVVAFMMLAFCFFTTKER 207 (460)
T ss_pred HHHHHHHHHHHHHHhcceec
Confidence 44444444444444444553
No 207
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.09 E-value=2.2e-05 Score=69.45 Aligned_cols=99 Identities=24% Similarity=0.204 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhcc
Q 020863 134 ALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPG 213 (320)
Q Consensus 134 ~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (320)
.........+..+.|.++.||+.||+|||++....++..+++.+........ ...... ...+.++-.+......|
T Consensus 86 ~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~---~~~~~~--m~~L~~~R~~LGiGIGG 160 (538)
T KOG0252|consen 86 LALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGT---TSPLGV--MMTLCFFRFLLGIGIGG 160 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCC---CCCcch--hhHHHHHHHHhhccccC
Confidence 3344444455578899999999999999998765555555555422211111 111111 22333444444555556
Q ss_pred ccccchhcccccCCccchhhhHHH
Q 020863 214 MGPVPWTLNSEVYPEQYRGICGGM 237 (320)
Q Consensus 214 ~~~~~~~~~~ElfP~~~R~~~~gi 237 (320)
-+|+..++.+|..-.+.||.-.+.
T Consensus 161 DYPlSAtI~SE~an~~~RGa~iaa 184 (538)
T KOG0252|consen 161 DYPLSATIMSESANKKTRGAFIAA 184 (538)
T ss_pred CCcchHHHhhhhhhhccccceeEE
Confidence 688988999999999999875444
No 208
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.09 E-value=0.00015 Score=66.92 Aligned_cols=159 Identities=16% Similarity=0.211 Sum_probs=76.6
Q ss_pred HHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHh----hhcchH-HHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchh
Q 020863 122 IVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLID----HFGRKK-LALSSLAGVIISLVLLSWAFISGSSASSSGVYG 196 (320)
Q Consensus 122 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~D----r~grR~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (320)
+.+..|.+....+.. ....-+..++..++.|+++| |+|||+ .++.+...+.++...+ +.. +.........
T Consensus 33 yt~v~Gls~~~vg~i-~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~ll---f~~-p~~~~~~~~~ 107 (473)
T PRK10429 33 YTDVVGLSVGLVGTL-FLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLL---FSA-HLFEGTAQYV 107 (473)
T ss_pred HHHhcCCCHHHHHHH-HHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHH---HcC-CCCCccHHHH
Confidence 344558775544433 33444557788889999999 559855 4544444433333222 111 1111111111
Q ss_pred HHHHHHHHHHHHHHhccccccchhcccccC-CccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-------chhHHHH
Q 020863 197 WIAVIGLALYIAFFAPGMGPVPWTLNSEVY-PEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG-------TGATFLI 268 (320)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Elf-P~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g-------~~~~~~~ 268 (320)
+. .+...++..++.. ......++.+|+. +++.|.+..+.....+.+++.+.+....++....| +.....+
T Consensus 108 ~~-~~~~~l~~~~~t~-~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i 185 (473)
T PRK10429 108 FV-CVTYILWGMTYTI-MDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLV 185 (473)
T ss_pred HH-HHHHHHHHHHHHH-HcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHH
Confidence 11 1111222222221 1222346778988 57889988887666666665555444333322222 2222333
Q ss_pred HHHHHHHHHHHHHhhcccC
Q 020863 269 LAGIAVLAVVFVILFVPET 287 (320)
Q Consensus 269 ~~~~~~~~~~~~~~~~pet 287 (320)
++++.++..+.+++..||.
T Consensus 186 ~~~~~~~~~~~~~~~~~e~ 204 (473)
T PRK10429 186 LIAFFIVSTIITLRNVHEV 204 (473)
T ss_pred HHHHHHHHHHHHHcCceec
Confidence 4444444444444445654
No 209
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.02 E-value=2e-05 Score=74.93 Aligned_cols=87 Identities=16% Similarity=0.222 Sum_probs=50.6
Q ss_pred hhhhccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHH-HhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcch
Q 020863 84 YLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRK 162 (320)
Q Consensus 84 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR 162 (320)
.++++++|.++...+..... ...++....|.|.+++ ..|.+......+.........+++.+++|+++||+++|
T Consensus 323 ~~~Ll~n~~f~~~~l~~~~~-----~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 323 IKRLLCNPIYMLVILAQVID-----SLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred HHHHHcCcHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence 55688888776654443222 2223334456777776 46776555444443333334578999999999999844
Q ss_pred --HHHHHHhHHHHHH
Q 020863 163 --KLALSSLAGVIIS 175 (320)
Q Consensus 163 --~~~~~~~~~~~~~ 175 (320)
+..........++
T Consensus 398 ~~~~~~~~~~~~~~~ 412 (633)
T TIGR00805 398 VKKAAYFAICLSTLS 412 (633)
T ss_pred HHHHHHHHHHHHHHH
Confidence 4444444333333
No 210
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.99 E-value=0.00089 Score=61.93 Aligned_cols=106 Identities=10% Similarity=0.001 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHhhhcchHH-------HHHHhHHHHHHHHHHHHHHH-hcCCCCCCcchhHHHHHHHHHHHHHHhccccc
Q 020863 145 NAVGTIVGIYLIDHFGRKKL-------ALSSLAGVIISLVLLSWAFI-SGSSASSSGVYGWIAVIGLALYIAFFAPGMGP 216 (320)
Q Consensus 145 ~~~~~l~~g~l~Dr~grR~~-------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (320)
.++.+++.+++.||++||+. +..+...+.++...+..... ...... .....+ .+....+. ...-.-..+
T Consensus 322 iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~-~~s~~~-~i~~~~l~-g~Ge~~~~~ 398 (489)
T PRK10207 322 VVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQG-LTSPWF-IVLVYLFQ-SLGELFISA 398 (489)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC-ccCHHH-HHHHHHHH-HHHHHHHhH
Confidence 34666777899999999862 44444444444333221111 111100 111111 11111111 111112234
Q ss_pred cchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHH
Q 020863 217 VPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTF 253 (320)
Q Consensus 217 ~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~ 253 (320)
....+..+..|++.++.+.|+.+....+++.++..+-
T Consensus 399 ~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~ 435 (489)
T PRK10207 399 LGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVA 435 (489)
T ss_pred HHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456777888999999999998877777777765543
No 211
>PTZ00207 hypothetical protein; Provisional
Probab=97.98 E-value=0.0012 Score=61.99 Aligned_cols=74 Identities=8% Similarity=0.033 Sum_probs=43.2
Q ss_pred ccchhcccccCCccchhhhHHHHHHHHHHHHHHH-HHHHHHHHHH----h------c---chhHHHHHHHHHHHHHHHHH
Q 020863 216 PVPWTLNSEVYPEQYRGICGGMSATVNWISNLIV-AQTFLTVAEL----V------G---TGATFLILAGIAVLAVVFVI 281 (320)
Q Consensus 216 ~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~-~~~~~~~~~~----~------g---~~~~~~~~~~~~~~~~~~~~ 281 (320)
++.....+|+|- +.=|+-..++...+-+++++- ..++..+.+. . | +..+|+++++++..+.+...
T Consensus 471 ~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~ 549 (591)
T PTZ00207 471 ATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITST 549 (591)
T ss_pred HHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHh
Confidence 444578899999 666655555444444444432 2223323221 1 1 35678888888888888766
Q ss_pred hhcccCCCC
Q 020863 282 LFVPETQGL 290 (320)
Q Consensus 282 ~~~pet~g~ 290 (320)
.+--+|+.-
T Consensus 550 ~l~~R~r~~ 558 (591)
T PTZ00207 550 YVHLQYRRL 558 (591)
T ss_pred heeeehHHH
Confidence 655566543
No 212
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.97 E-value=0.00082 Score=58.86 Aligned_cols=132 Identities=13% Similarity=0.059 Sum_probs=77.6
Q ss_pred eeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcc
Q 020863 115 VMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGV 194 (320)
Q Consensus 115 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (320)
.....|.+.+..+++..+.+.. -.....+.++.++..+++.+|+|+|+-++.+..++++...+..-+.... .
T Consensus 32 ~diLip~l~~~f~ls~~~a~li-qfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~-------~ 103 (422)
T COG0738 32 NDILIPHLKEVFDLTYFEASLI-QFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSK-------S 103 (422)
T ss_pred chhhHHHHHHHhCccHHHHHHH-HHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhh-------h
Confidence 3456788988888876654443 3444455788889999999999999988888777766665543211110 0
Q ss_pred hhHHHHHHHHHHHHHHhcccc-ccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 020863 195 YGWIAVIGLALYIAFFAPGMG-PVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVA 257 (320)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~ 257 (320)
+ ...+.+. +....+.+.- ...-.+.+.+.|++.-+.-.+++..++.+|+.+++.+...+.
T Consensus 104 y-~~FL~~l--Fila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~li 164 (422)
T COG0738 104 Y-GFFLVAL--FILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLI 164 (422)
T ss_pred H-HHHHHHH--HHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 1 1111111 1111111110 112246667777765555567777788888877776555443
No 213
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=97.95 E-value=0.0043 Score=57.25 Aligned_cols=73 Identities=19% Similarity=0.194 Sum_probs=51.0
Q ss_pred cccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhcc
Q 020863 213 GMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVP 285 (320)
Q Consensus 213 ~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p 285 (320)
...+..+.+.+|..|++.|++..|+......+++.+++.+........++...|...+.++++++++.++..|
T Consensus 397 ~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 397 MISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred HHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3456777888999999999999999988887888877666554444445555666666555555555444444
No 214
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.94 E-value=0.0011 Score=61.63 Aligned_cols=136 Identities=13% Similarity=0.060 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHhhhcch----HHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhc
Q 020863 146 AVGTIVGIYLIDHFGRK----KLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTL 221 (320)
Q Consensus 146 ~~~~l~~g~l~Dr~grR----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (320)
.+..++..++.+|+++| ..+..+....+++...+.......... .....+ .++...+..........|....+
T Consensus 330 il~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~--~~vs~~-~~~~~~~l~~~ge~~~~p~g~s~ 406 (500)
T PRK09584 330 MIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDA--GIVSVN-WLIASYGLQSIGELMISGLGLAM 406 (500)
T ss_pred HHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCC--CccCHH-HHHHHHHHHHHHHHHHhHHHHHH
Confidence 34445555555665554 444555555555555443332211111 111111 12222222222333345666778
Q ss_pred ccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHH----------HHhcchhHHHHHHHHHHHHHHHHHhhc
Q 020863 222 NSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVA----------ELVGTGATFLILAGIAVLAVVFVILFV 284 (320)
Q Consensus 222 ~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~----------~~~g~~~~~~~~~~~~~~~~~~~~~~~ 284 (320)
..+..|++.|+...|+......+++.+++.+..... ...++...|...+.++++.+++.+...
T Consensus 407 ~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~ 479 (500)
T PRK09584 407 VAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLTA 479 (500)
T ss_pred HHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999876555566666655542110 111244566666655554444333333
No 215
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.88 E-value=0.00099 Score=61.17 Aligned_cols=142 Identities=18% Similarity=0.192 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhH-HHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccc
Q 020863 138 SLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLA-GVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGP 216 (320)
Q Consensus 138 ~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (320)
..+..+..++..++-|-++|+-|+|+.++.... .+.++...+. +. .+. .. +...+...+....+ .....
T Consensus 76 ~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~--~v-~~~----~~--~~~~~l~iia~v~~-~~~~v 145 (477)
T PF11700_consen 76 NSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLW--FV-SPG----QW--WLALVLFIIANVGY-EASNV 145 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHH--Hh-Ccc----hH--HHHHHHHHHHHHHH-HHHHH
Confidence 334444466777888999999998886554322 2222222221 11 111 11 11111111111111 11223
Q ss_pred cchhcccccCCccch--------------------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHhc--------c
Q 020863 217 VPWTLNSEVYPEQYR--------------------------GICGGMSATVNWISNLIVAQTFLTVAELVG--------T 262 (320)
Q Consensus 217 ~~~~~~~ElfP~~~R--------------------------~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g--------~ 262 (320)
...++.+|+.+++.+ ++.+|.....+.+|+++.-.+...+....+ .
T Consensus 146 fyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~ 225 (477)
T PF11700_consen 146 FYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAI 225 (477)
T ss_pred HHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhh
Confidence 345788999988888 889999999998888765444333322221 2
Q ss_pred hhHHHHHHHHHHHHHHHHHhhcccCCC
Q 020863 263 GATFLILAGIAVLAVVFVILFVPETQG 289 (320)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~pet~g 289 (320)
...+.+.+..-++..+..++++||.++
T Consensus 226 r~~~~~~a~ww~vfsiP~~~~~~~~~~ 252 (477)
T PF11700_consen 226 RVAFLIVALWWLVFSIPLFLWLPDRPG 252 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 344555666666666667788888866
No 216
>PRK09848 glucuronide transporter; Provisional
Probab=97.84 E-value=0.0013 Score=60.15 Aligned_cols=45 Identities=16% Similarity=0.143 Sum_probs=29.9
Q ss_pred HHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhh----cchHHH
Q 020863 120 PTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHF----GRKKLA 165 (320)
Q Consensus 120 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~----grR~~~ 165 (320)
+++.+..|++.... .....+..+..++..++.|+++||. |||+..
T Consensus 33 ~y~~~~~gl~~~~~-g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~ 81 (448)
T PRK09848 33 SYYTDVAGVGAAAA-GTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPF 81 (448)
T ss_pred HHHHHHcCCCHHHH-HHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHH
Confidence 33334457765443 4444455566788999999999996 777644
No 217
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.81 E-value=0.00065 Score=62.48 Aligned_cols=155 Identities=17% Similarity=0.047 Sum_probs=79.9
Q ss_pred HHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-----chHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcc
Q 020863 120 PTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFG-----RKKLALSSLAGVIISLVLLSWAFISGSSASSSGV 194 (320)
Q Consensus 120 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~g-----rR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (320)
+.+.++.|.+..+.+.+.++. .....+ .++.|.++||++ ||+.+..+..... ...+ ...... . +.
T Consensus 50 ~~l~~~lg~s~~~i~~~~sl~-~lpw~~-K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~--~~~~-~~l~~~--~--~~- 119 (468)
T TIGR00788 50 PMLTDDLGLDGARYQRLVGLS-SLGWAL-KPFAGVMSDTFPLFGYTKRWYLVLSGLLGS--AILY-GLLPGK--V--SS- 119 (468)
T ss_pred HHHHHhcCCCHHHHHHHHHHH-HHHHHH-HHHHHHHHHhcCCCCccchHHHHHHHHHHH--HHHH-Hhcccc--c--ch-
Confidence 444556798876654443333 222333 455899999997 5555554433221 1111 111110 0 11
Q ss_pred hhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHH---HHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHH
Q 020863 195 YGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGG---MSATVNWISNLIVAQTFLTVAELVGTGATFLILAG 271 (320)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~g---i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 271 (320)
. ....+. .+...+.........-.+..|..+ +.+..+.+ +......+|..+++.+...+.+..++...|++.++
T Consensus 120 ~-~~~~~~-~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~ 196 (468)
T TIGR00788 120 A-KVAAAF-IFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAA 196 (468)
T ss_pred H-HHHHHH-HHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHH
Confidence 1 111111 111122222223445677789888 44443322 22232336777777777777777788888888777
Q ss_pred HHHHHHHHHHhhcccCC
Q 020863 272 IAVLAVVFVILFVPETQ 288 (320)
Q Consensus 272 ~~~~~~~~~~~~~pet~ 288 (320)
+.++. .+...+.||.+
T Consensus 197 l~ll~-~~~~~~~~E~~ 212 (468)
T TIGR00788 197 LLLLQ-LFVSNLSKERR 212 (468)
T ss_pred HHHHH-HHHHHhccccc
Confidence 77666 44456778864
No 218
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.81 E-value=0.006 Score=52.93 Aligned_cols=157 Identities=20% Similarity=0.152 Sum_probs=73.5
Q ss_pred HHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHH
Q 020863 121 TIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAV 200 (320)
Q Consensus 121 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (320)
.++++.|++..+.+..... ..+...+...+.|.++||+|||+.-+...+...++.+. .....-...+.--.+
T Consensus 59 ~LY~~yg~~~~qIa~Lf~~-Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~-------k~~~~~~~L~~GRvl 130 (354)
T PF05631_consen 59 ALYESYGFSEHQIAILFVA-GFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLT-------KHSSNYPVLLLGRVL 130 (354)
T ss_pred HHHHHcCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH-------HhccccHHHHHHHHH
Confidence 4567778876665544333 33335566667789999999998644333333332221 111100000000011
Q ss_pred HHHHHHHHHHhccccccchhcccc----cCCccchhhhHHHHHHH-HHHHHHHHHHHHHHHHHHhc--chhHHHHHHHHH
Q 020863 201 IGLALYIAFFAPGMGPVPWTLNSE----VYPEQYRGICGGMSATV-NWISNLIVAQTFLTVAELVG--TGATFLILAGIA 273 (320)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~E----lfP~~~R~~~~gi~~~~-~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~ 273 (320)
.++.....+.+. ---+..| -+|.+-.+...+.+... +.+.+++++.+-..+.+..+ ..++|.....+.
T Consensus 131 gGiaTSLLfS~F-----EsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l 205 (354)
T PF05631_consen 131 GGIATSLLFSAF-----ESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLL 205 (354)
T ss_pred HHHHHHHHHHHH-----HHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHH
Confidence 111111111110 0112223 34555444444444322 33344444444444555544 356777776776
Q ss_pred HHHHHHHHhhcccCCCC
Q 020863 274 VLAVVFVILFVPETQGL 290 (320)
Q Consensus 274 ~~~~~~~~~~~pet~g~ 290 (320)
.++.++....-+|..|.
T Consensus 206 ~~~~~~I~~~W~ENyg~ 222 (354)
T PF05631_consen 206 AVAAVLILKTWPENYGD 222 (354)
T ss_pred HHHHHHHHhcccccCCC
Confidence 66666555555676665
No 219
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.68 E-value=0.0081 Score=57.35 Aligned_cols=152 Identities=20% Similarity=0.224 Sum_probs=80.5
Q ss_pred HHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHH
Q 020863 123 VQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDH-FGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVI 201 (320)
Q Consensus 123 ~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr-~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (320)
....+.+......... ......-+..+++|+++|+ +||++.+..+.+...++..++.+. .... ..........+.
T Consensus 15 ~~~lg~~~~~A~~i~~-~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~--a~~~-~~~~~~~~~~l~ 90 (654)
T TIGR00926 15 LNFLGFSESTSTVLFH-TFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFG--AIPS-SGHPLHDLLDLL 90 (654)
T ss_pred HHHcCCcHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhc--cCcc-cccchHHHHHHH
Confidence 3345555443332222 2233345667889999997 899988776655555544443321 1100 001111111222
Q ss_pred HHHHHHHHHhccccccchhcccccCCcc---chhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-------cchhHHHHHHH
Q 020863 202 GLALYIAFFAPGMGPVPWTLNSEVYPEQ---YRGICGGMSATVNWISNLIVAQTFLTVAELV-------GTGATFLILAG 271 (320)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~ElfP~~---~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~-------g~~~~~~~~~~ 271 (320)
++.+ ......+.-+...+...|.|+.+ .|-+...+.....++|+++++.+.+.+.... +|..+|.+.++
T Consensus 91 gLaL-ia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i 169 (654)
T TIGR00926 91 GLAL-IALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAI 169 (654)
T ss_pred HHHH-HHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHH
Confidence 2221 11112222233345667777653 3566777788888899988888888776432 46667766666
Q ss_pred HHHHHHHH
Q 020863 272 IAVLAVVF 279 (320)
Q Consensus 272 ~~~~~~~~ 279 (320)
+++++.++
T Consensus 170 ~m~ia~lv 177 (654)
T TIGR00926 170 LMILALIV 177 (654)
T ss_pred HHHHHHHH
Confidence 66655543
No 220
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=97.66 E-value=0.0013 Score=59.65 Aligned_cols=50 Identities=10% Similarity=0.072 Sum_probs=33.8
Q ss_pred HHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-hHHHHHHhH
Q 020863 120 PTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGR-KKLALSSLA 170 (320)
Q Consensus 120 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~gr-R~~~~~~~~ 170 (320)
+.+.++.|.+..+.+.... .......++.+..|.++||+|| |+.+..+..
T Consensus 27 ~~l~~~~g~s~~~iGl~~a-~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~ 77 (418)
T TIGR00889 27 SYMSKTLHFSGAEIGWVYS-STGIAAILMPILVGIIADKWLSAQKVYAVCHF 77 (418)
T ss_pred HHHHHhcCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHH
Confidence 3445567887666555444 4455578999999999999966 555554443
No 221
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=97.62 E-value=0.00099 Score=57.75 Aligned_cols=153 Identities=22% Similarity=0.138 Sum_probs=82.1
Q ss_pred HHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHH
Q 020863 120 PTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIA 199 (320)
Q Consensus 120 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (320)
|.+-..-|.+..+.+... ......+.+++...|.++|++|||+.+..+....++.. +....++. +.+
T Consensus 102 ~~l~~~w~~s~~q~~llt-~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~------~is~~spn----f~~-- 168 (528)
T KOG0253|consen 102 PALDEVWGPSEGQAPLLT-LSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFG------VISGASPN----FAS-- 168 (528)
T ss_pred HHHHhhhchhhhhhhHHH-HHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHH------HhhcCCCC----eeh--
Confidence 333334455444444433 33344477888899999999999997765443332211 12222211 111
Q ss_pred HHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHH
Q 020863 200 VIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVF 279 (320)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 279 (320)
++.+=....++.|..|..-++-.|..|...|....-+. ..-.++.++...+.-......||.+..+.......+.+ .
T Consensus 169 -L~~f~~l~~~g~gg~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a-~ 245 (528)
T KOG0253|consen 169 -LCVFRALWGFGVGGLPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAA-R 245 (528)
T ss_pred -hhHHHHHHhccCCCccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHH-H
Confidence 11111222334444565556667999999998765544 33335555544444444555677665554443333333 3
Q ss_pred HHhhcccCC
Q 020863 280 VILFVPETQ 288 (320)
Q Consensus 280 ~~~~~pet~ 288 (320)
.++++||+.
T Consensus 246 f~~w~~ESp 254 (528)
T KOG0253|consen 246 FLVWVYESP 254 (528)
T ss_pred HHhhcccCc
Confidence 457899973
No 222
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.52 E-value=0.00096 Score=59.23 Aligned_cols=151 Identities=20% Similarity=0.234 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHH-HHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhc
Q 020863 134 ALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLAL-SSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAP 212 (320)
Q Consensus 134 ~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (320)
+.+..+...+.+.++++++|.+.||.+.-+..+ .......++. +..... ..... + .++....... ..++..
T Consensus 303 aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~-~~l~~~-t~~~~--~---~viv~~t~~~-~g~~~~ 374 (480)
T KOG2563|consen 303 AGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGT-LMLLTC-TLFLG--D---SVIVFTTCGL-LGFFGT 374 (480)
T ss_pred cchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHH-HHHHHh-hccCC--c---eEehhhhHHH-HHHhhc
Confidence 344455555668899999999999976544322 2222222221 111111 11111 1 1122222222 234455
Q ss_pred cccccchhccccc-CCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc----chhHHHHHHHHHHHHHHHHHhhcccC
Q 020863 213 GMGPVPWTLNSEV-YPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG----TGATFLILAGIAVLAVVFVILFVPET 287 (320)
Q Consensus 213 ~~~~~~~~~~~El-fP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~pet 287 (320)
+..|+..-+..|. ||-..+ +..|+.+..+.+.+++-..+.....+..+ +...-+..+..++++.+++.++.|+-
T Consensus 375 ~~~Pig~ElgvE~TyPv~E~-tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y 453 (480)
T KOG2563|consen 375 GYLPIGFELGVETTYPVAEG-TSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDY 453 (480)
T ss_pred CCCCcceeeeeeeccccCCc-ccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhH
Confidence 6677777777786 565544 46677777777777666555555554444 33333445566666666666777776
Q ss_pred CCCCHH
Q 020863 288 QGLTFL 293 (320)
Q Consensus 288 ~g~~~~ 293 (320)
++++.|
T Consensus 454 ~R~~~e 459 (480)
T KOG2563|consen 454 RRLRAE 459 (480)
T ss_pred HhHhhh
Confidence 655555
No 223
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.52 E-value=0.0027 Score=57.43 Aligned_cols=137 Identities=18% Similarity=0.196 Sum_probs=73.6
Q ss_pred eehHHHHH-HhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhh----hcchHHHH-HHhHHHHHHHHHHHHHHHhcCCC-
Q 020863 117 YYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDH----FGRKKLAL-SSLAGVIISLVLLSWAFISGSSA- 189 (320)
Q Consensus 117 ~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr----~grR~~~~-~~~~~~~~~~~~~~~~~~~~~~~- 189 (320)
.|+.+++. ..|++....+ ..-++.=+..++.-++.|.++|| +|||+..+ .+....++... ..+......
T Consensus 33 ~yLl~fYTdv~Gis~~~aG-~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~---l~F~~p~~~~ 108 (467)
T COG2211 33 LYLLFFYTDVFGLSAALAG-TIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAV---LLFITPDFSM 108 (467)
T ss_pred HHHHHHHhcccCCcHHHHH-HHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHH---HHHcCCCccc
Confidence 44555554 4566644332 22223333466778889999996 67666543 33222222222 122222111
Q ss_pred CCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCc-cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 020863 190 SSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPE-QYRGICGGMSATVNWISNLIVAQTFLTVAELVG 261 (320)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~-~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g 261 (320)
.....+.++..+... ..+....-| ..++.+|+-++ +.|.+..+.-...+.+++.+...+++++....+
T Consensus 109 ~~k~~ya~vtY~l~~---l~YT~vniP-y~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g 177 (467)
T COG2211 109 TGKLIYALVTYMLLG---LGYTLVNIP-YGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFG 177 (467)
T ss_pred CcchHHHHHHHHHHH---HHHHheeCc-hhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 112333333333222 222222222 23677888644 669999999888899998888888888776554
No 224
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=97.50 E-value=0.0022 Score=57.60 Aligned_cols=51 Identities=24% Similarity=0.401 Sum_probs=36.6
Q ss_pred eeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-hHHHH
Q 020863 115 VMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGR-KKLAL 166 (320)
Q Consensus 115 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~gr-R~~~~ 166 (320)
...|.+.+++..|++..+.+...++. ....+++.++.|+++||.++ |+.+.
T Consensus 21 ~~p~~~~~L~~~G~s~~qIG~l~a~~-~~~~i~~~~~~g~~aDr~~~~~~~l~ 72 (400)
T PF03825_consen 21 FLPYLPLYLESRGFSGTQIGILLAVG-PLARIVSPPFWGAIADRFGSAKRILA 72 (400)
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHhHhhhHHHHHH
Confidence 33456778999998877766655544 44478889999999999864 44443
No 225
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.44 E-value=0.00063 Score=45.51 Aligned_cols=57 Identities=18% Similarity=0.347 Sum_probs=42.9
Q ss_pred cCcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHH
Q 020863 110 TGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALS 167 (320)
Q Consensus 110 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~ 167 (320)
.+.....-|.|.++++.|.+..+.+....+.. ...+++.++.|+++||.+|++....
T Consensus 14 ~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~-~~~~~~~pl~g~laDk~~~~~~~l~ 70 (77)
T PF12832_consen 14 AALGCLYPFLPLYLKQLGLSPSQIGILSAIRP-LIRFLAPPLWGFLADKFGKRKVILL 70 (77)
T ss_pred HHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCccHHHHH
Confidence 34444556778888999998777666555544 4478999999999999999987653
No 226
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.38 E-value=0.0058 Score=54.43 Aligned_cols=123 Identities=13% Similarity=-0.007 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhc
Q 020863 133 LALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAP 212 (320)
Q Consensus 133 ~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (320)
...+.+.+.....++..+.+.|+.||.|-|.....+.....++..+=.+. ..+........ -+...+-.+.......
T Consensus 80 ~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~is--s~p~v~~~f~~-~l~~~Gq~iaa~Aq~F 156 (480)
T KOG2563|consen 80 AADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLIS--SLPFVPPLFRR-PLTHTGQSIAAAAQPF 156 (480)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc--cCccccccchh-hhhHHhHHHHHHhhhH
Confidence 34556666677788899999999999999998776666655554432221 11111111111 1222222221111100
Q ss_pred cccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020863 213 GMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAEL 259 (320)
Q Consensus 213 ~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~ 259 (320)
.-..+.-+..--||++.|+++..++...+-+|..++..+.+.+...
T Consensus 157 -im~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~ 202 (480)
T KOG2563|consen 157 -ILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPS 202 (480)
T ss_pred -hhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCC
Confidence 1112223445569999999999888888888887777766665543
No 227
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=97.29 E-value=0.014 Score=50.69 Aligned_cols=158 Identities=18% Similarity=0.167 Sum_probs=91.0
Q ss_pred cceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCC
Q 020863 112 INTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASS 191 (320)
Q Consensus 112 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (320)
+..+.-..+.+-++.|.+....+...+++. .+..+.++++.++.+|+|-++.+..+.+...++..+ -....
T Consensus 28 itsvgPLL~~Ir~~~gls~s~aGlLTtLPl-l~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~i-----R~~~~--- 98 (395)
T COG2807 28 ITSVGPLLDEIRQDLGLSFSVAGLLTTLPL-LAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILI-----RSLGG--- 98 (395)
T ss_pred hhhhhhhHHHHHHHhcccHHHHHHHHHHHH-HHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHH-----Hhccc---
Confidence 344445566777888888766666555554 446788889999999999988776554433332221 11100
Q ss_pred CcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhHHHHHH
Q 020863 192 SGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELV-GTGATFLILA 270 (320)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~ 270 (320)
....+.+. .+........+......+=+-||.+ -+...|+....-.+++.+++..-+++.++. +|.....+.+
T Consensus 99 ----~~~L~~gt-~l~G~gIav~nVLLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WA 172 (395)
T COG2807 99 ----LPLLFLGT-LLAGAGIAVINVLLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWA 172 (395)
T ss_pred ----HHHHHHHH-HHHHhhHHHHHHhhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHH
Confidence 01111111 1111111111222334556778877 445667776666677777777666666655 6888877777
Q ss_pred HHHHHHHHHHHhhcccC
Q 020863 271 GIAVLAVVFVILFVPET 287 (320)
Q Consensus 271 ~~~~~~~~~~~~~~pet 287 (320)
..+++..+ .|+|..
T Consensus 173 l~allAl~---~WlPq~ 186 (395)
T COG2807 173 LLALLALL---IWLPQA 186 (395)
T ss_pred HHHHHHHH---HHhhhc
Confidence 77666543 567774
No 228
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=97.25 E-value=0.0013 Score=58.65 Aligned_cols=45 Identities=22% Similarity=0.322 Sum_probs=27.9
Q ss_pred HHHHH-HhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHH
Q 020863 120 PTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLA 165 (320)
Q Consensus 120 ~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~ 165 (320)
|.-++ ..|++..+.+...+ .......+..++.|.++||+|.|+-+
T Consensus 31 ~iWL~~~~GLs~~~iG~i~s-~~~~~~l~~qp~~G~i~Dklg~kK~L 76 (412)
T PF01306_consen 31 PIWLTQVAGLSGTEIGIIFS-AGSLFALLAQPVYGFISDKLGLKKHL 76 (412)
T ss_dssp HHHHHHHH---HHHHHHHHH-HHHHHHHHTHHHHHHHHHHCTTCSHH
T ss_pred HHHHccccCCCHHHHHHHHH-HHHHHHHHHHHhHHHhcchhhhhHHH
Confidence 44454 58988766554444 34445677888999999999966543
No 229
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.19 E-value=0.0014 Score=62.18 Aligned_cols=142 Identities=15% Similarity=0.228 Sum_probs=73.3
Q ss_pred chHHHHhhhhHHHHHHHHHhhcCCCChHHHHhcCCH--HHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHhccccchhhh
Q 020863 10 TWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDK--EKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDV 87 (320)
Q Consensus 10 ~WR~~f~i~~~~~l~~~~~~~~lpESp~~l~~~~~~--~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (320)
.|+.=|++.+...++..+..+++|.... ...++ +++.+..+.-.+..+.+.. . . +..+.- ....+++
T Consensus 320 AWWlGFLi~g~~~~~~a~p~f~fPk~lp---~~~~~~~~~~~~~~k~~~~~~~~~~~---~---~-~~ikdf-p~s~~~l 388 (735)
T KOG3626|consen 320 AWWLGFLICGALLLFSAVPLFFFPKELP---KSQKRKRARDLHVLKTESGGAKSDKT---F---G-KKIKDF-PKSIKRL 388 (735)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcccCc---cccccchhhhhcccccccccccCCcc---h---h-hhHHHH-HHHHHHH
Confidence 6999999999999888777776665531 11111 1111111000000000000 0 0 000000 1235677
Q ss_pred ccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHH-HhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--chHH
Q 020863 88 FKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFG--RKKL 164 (320)
Q Consensus 88 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~g--rR~~ 164 (320)
++||.+...++. .......+.....|+|.+++ +.|.+......+...+...+.++|.+++|+++.|+. -|..
T Consensus 389 l~N~if~~~~l~-----~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~ 463 (735)
T KOG3626|consen 389 LSNPIFMLVVLA-----SVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGA 463 (735)
T ss_pred hcCchHHHHHHH-----HHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHH
Confidence 777765443332 22333344455567787666 678876555555545555556789999999999855 4444
Q ss_pred HHH
Q 020863 165 ALS 167 (320)
Q Consensus 165 ~~~ 167 (320)
...
T Consensus 464 a~~ 466 (735)
T KOG3626|consen 464 AKF 466 (735)
T ss_pred HHH
Confidence 433
No 230
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.17 E-value=0.0044 Score=56.39 Aligned_cols=42 Identities=17% Similarity=0.224 Sum_probs=35.0
Q ss_pred hcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 020863 220 TLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG 261 (320)
Q Consensus 220 ~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g 261 (320)
.+.+|+.|+..-|+..++..++.+++..++..+-..+.+..+
T Consensus 341 vl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 341 VLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFG 382 (433)
T ss_pred HHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 567899999999999999999999999888776666665544
No 231
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.17 E-value=0.016 Score=51.26 Aligned_cols=113 Identities=15% Similarity=0.049 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHhhhc-----chHH-HHHHhHHHHHHHHHHHHHHHhcCC---CCCCcchhHHHHHHHHHHHHHHhccc-c
Q 020863 146 AVGTIVGIYLIDHFG-----RKKL-ALSSLAGVIISLVLLSWAFISGSS---ASSSGVYGWIAVIGLALYIAFFAPGM-G 215 (320)
Q Consensus 146 ~~~~l~~g~l~Dr~g-----rR~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 215 (320)
.+.-+..|+.||+-+ ||.. +..+...+..+............. ......+.+....+..+.....+... +
T Consensus 28 ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~ 107 (403)
T PF03209_consen 28 APLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGLALAALAFLLYGLGVHASG 107 (403)
T ss_pred HHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHhhHhHhH
Confidence 466778899999988 7754 344444444433333332222211 11112222322322222222222222 2
Q ss_pred ccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 020863 216 PVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAE 258 (320)
Q Consensus 216 ~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~ 258 (320)
....++.+|..|++.|+++.++....--++.+++..+...+.+
T Consensus 108 T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~ 150 (403)
T PF03209_consen 108 TSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLD 150 (403)
T ss_pred HHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 2335788999999999999999887776776666666665544
No 232
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.07 E-value=0.021 Score=51.98 Aligned_cols=140 Identities=14% Similarity=0.126 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhc--chHHHHHHhHHHHHHHHHH-HHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhcccc
Q 020863 139 LAVAGTNAVGTIVGIYLIDHFG--RKKLALSSLAGVIISLVLL-SWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMG 215 (320)
Q Consensus 139 ~~~~~~~~~~~l~~g~l~Dr~g--rR~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (320)
....++.++++++.|+...|.+ ||+++. +.+.++++.++. ...+. +. +. .++.+++-. ...++.+..
T Consensus 78 aa~slg~~i~~liF~~Ws~k~~~~k~Pli~-s~ii~~~g~llY~~l~~~--~~---~~--~y~mL~~R~--l~Gvg~~n~ 147 (488)
T KOG2325|consen 78 AASSLGHAIFSLIFGIWSNKTGSVKKPLIV-SFLIAIIGNLLYLALAYV--PN---GV--KYLMLVARI--LTGVGVGNF 147 (488)
T ss_pred HHHHHHHHhcchhhcccccccCCcccCHHH-HHHHHHHHHHHHHHHHhc--cc---ch--HHHHHHHHH--HcCcCcccH
Confidence 3345557889999999999988 666654 444444444443 33221 11 11 122222222 122223333
Q ss_pred ccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHH---HHHHH---------hc-chhHHHHHHHHHHHHHHHHHh
Q 020863 216 PVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFL---TVAEL---------VG-TGATFLILAGIAVLAVVFVIL 282 (320)
Q Consensus 216 ~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~---~~~~~---------~g-~~~~~~~~~~~~~~~~~~~~~ 282 (320)
...-.|.+.-.-.+.|.++.+.......++.++|+.+-+ ++.+. .+ +..+-++.+.+.++..++..+
T Consensus 148 a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~ 227 (488)
T KOG2325|consen 148 AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILF 227 (488)
T ss_pred HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHh
Confidence 344467777544555555554443333344444443322 22210 01 234555666666666666666
Q ss_pred hcccCC
Q 020863 283 FVPETQ 288 (320)
Q Consensus 283 ~~pet~ 288 (320)
++.|-.
T Consensus 228 ~f~E~~ 233 (488)
T KOG2325|consen 228 FFKEVY 233 (488)
T ss_pred heeecc
Confidence 676643
No 233
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.03 E-value=0.019 Score=52.27 Aligned_cols=158 Identities=25% Similarity=0.221 Sum_probs=80.9
Q ss_pred HHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhh---c--chHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcc
Q 020863 120 PTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHF---G--RKKLALSSLAGVIISLVLLSWAFISGSSASSSGV 194 (320)
Q Consensus 120 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~---g--rR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (320)
+.+.+..|.++.+.+.+..+. .. --...++.|.++|-+ | ||+.+..+.....++...+... .. ... ..
T Consensus 14 ~~l~~~l~ls~~~~~~~~~~~-~l-Pw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~--~~-~~~--s~ 86 (433)
T PF03092_consen 14 PFLKDDLGLSPAQLQRLSSLA-SL-PWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALL--PA-SES--SA 86 (433)
T ss_pred HHHHHHcCCCHHHHHHHHHHH-hC-chHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhc--cc-ccc--hh
Confidence 455667888766544433222 11 123456889999975 3 4444444443333323222211 11 000 11
Q ss_pred hhHHHHHHHHHHHHHHhccccccchhcccccC---CccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHH
Q 020863 195 YGWIAVIGLALYIAFFAPGMGPVPWTLNSEVY---PEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAG 271 (320)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Elf---P~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 271 (320)
....+...+ ..+.....-.+.-+...|.. |.+ |+...+.+.....+|++++..+-.++.+..+....|.+.+.
T Consensus 87 --~~~~~~l~l-a~~g~a~~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~ 162 (433)
T PF03092_consen 87 --AIAVVLLFL-ASFGYAFADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAA 162 (433)
T ss_pred --hhHHHHHHH-HHHHHHHHHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHH
Confidence 111111111 11111111223345555654 555 77777777777778888877776667776666667777666
Q ss_pred HHHHHHHHHHhhcccCC
Q 020863 272 IAVLAVVFVILFVPETQ 288 (320)
Q Consensus 272 ~~~~~~~~~~~~~pet~ 288 (320)
+..+..+...++.+|.+
T Consensus 163 ~~~l~~~~~~~~~~e~~ 179 (433)
T PF03092_consen 163 LPLLMLIVALFLLEERK 179 (433)
T ss_pred HHHHHHHHHHHhhhhcc
Confidence 66666555666677633
No 234
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.03 E-value=0.00015 Score=67.47 Aligned_cols=73 Identities=16% Similarity=0.277 Sum_probs=0.0
Q ss_pred chhhhccchhhHHHHHHHHHHHHHHhhcCcceeeeehHHHHH-HhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 020863 83 RYLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFG 160 (320)
Q Consensus 83 ~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~g 160 (320)
..+++++||.+....+. .............|.|.++| +++.+......+.........++|.+++|+++.|+.
T Consensus 297 ~l~~Ll~Np~f~~~~la-----~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~k 370 (539)
T PF03137_consen 297 ALKRLLTNPVFMCLILA-----GVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFK 370 (539)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred HHHHHhcChHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEec
Confidence 35567777765433332 22233344555667787776 567765554454444444456789999999999865
No 235
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.83 E-value=0.039 Score=42.40 Aligned_cols=128 Identities=14% Similarity=0.100 Sum_probs=65.3
Q ss_pred cceeeeehHHHHHHhCCCC-----cHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhc
Q 020863 112 INTVMYYSPTIVQMAGFQS-----NQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISG 186 (320)
Q Consensus 112 ~~~~~~~~~~~~~~~g~~~-----~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~ 186 (320)
+........+++++.+.+. .........+..+...++++++..+.+++|.|..++.+.+...+-.. .+...
T Consensus 12 f~t~~~i~~svi~s~~~~~~~~i~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~----~~~~~ 87 (156)
T PF05978_consen 12 FQTQSFIQESVIHSVHERNPSSISAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIA----SFFYP 87 (156)
T ss_pred HhhhhHHHHHHHHHHhhcCcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHH----HHHhh
Confidence 3333344455555443321 12234444455555778889999999999999987665443322211 11111
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHH
Q 020863 187 SSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQT 252 (320)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~ 252 (320)
. .+..+.+-.+. .+...-.+.....+..+..+++.|++-.|+.-.+...+.++|...
T Consensus 88 ~--------~~~l~~~s~l~-G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~ 144 (156)
T PF05978_consen 88 N--------SYTLYPASALL-GFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLF 144 (156)
T ss_pred h--------HHHHHHHHHHH-hhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 0 11122222121 111111222233566777777888877777666665555554443
No 236
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.03 E-value=0.83 Score=41.49 Aligned_cols=129 Identities=17% Similarity=0.143 Sum_probs=73.7
Q ss_pred eehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchh
Q 020863 117 YYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 196 (320)
Q Consensus 117 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (320)
..+..++...|.+....+.... ...+.++.++.+..++.+|+|-.+.-..+.....+++.+....+....+.. ....
T Consensus 279 ~lmt~yl~~~G~s~~~igi~R~-~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~--~~~s 355 (432)
T PF06963_consen 279 GLMTAYLKSQGYSPSVIGIFRG-LGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPF--SSIS 355 (432)
T ss_pred HHHHHHHHHCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCc--hhhH
Confidence 3456778888988766554444 334557889999999999999877666655555555444433332222210 1111
Q ss_pred HHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHH
Q 020863 197 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLI 248 (320)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~ 248 (320)
...+.+.....-..-=+.--....+.-|..|.+.||...|.-+..+++...+
T Consensus 356 ~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll 407 (432)
T PF06963_consen 356 AYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELL 407 (432)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHH
Confidence 1112111111111100111123456678999999999999988877766544
No 237
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.00 E-value=0.39 Score=40.36 Aligned_cols=121 Identities=25% Similarity=0.325 Sum_probs=58.5
Q ss_pred hHHHHHHhCCCCc--HHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchh
Q 020863 119 SPTIVQMAGFQSN--QLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 196 (320)
Q Consensus 119 ~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (320)
.+.+....+.+.. ..... .........++.++.|.+.||.|||+....+......+.... .+.. . ..
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~--~~~~--~---~~--- 93 (338)
T COG0477 25 LPLLLSTLSLSSGRLLYGLL-LSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLL--ALAP--N---VG--- 93 (338)
T ss_pred HHHHHHHcCCCchhHHHHHH-HHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHH--HhCc--c---ch---
Confidence 3444555444331 22232 333334456666899999999999976655443322221111 1111 0 00
Q ss_pred HHHHHHHHHHHHHHhccccccchhcccccCCc-cchhhhHHHHHH-HHHHHHHHHH
Q 020863 197 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPE-QYRGICGGMSAT-VNWISNLIVA 250 (320)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~-~~R~~~~gi~~~-~~~~~~~~~~ 250 (320)
...................+....+.+|.+|. +.|+...+.... ....+..+++
T Consensus 94 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (338)
T COG0477 94 LALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGP 149 (338)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111111122222345556788899997 567777666655 3444444444
No 238
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=95.89 E-value=0.055 Score=47.46 Aligned_cols=37 Identities=16% Similarity=0.129 Sum_probs=30.3
Q ss_pred hhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHH
Q 020863 219 WTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLT 255 (320)
Q Consensus 219 ~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~ 255 (320)
..+.+...|++.||+..|+..+.+.++-.++|..-..
T Consensus 374 t~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~ 410 (451)
T KOG2615|consen 374 TSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGV 410 (451)
T ss_pred HHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhhe
Confidence 3566788899999999999999998888888776543
No 239
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.87 E-value=0.027 Score=49.62 Aligned_cols=215 Identities=16% Similarity=0.090 Sum_probs=101.5
Q ss_pred chHHHHhhhhHHHHHHHHHhhcCCCChHHHHhcCCHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHhccccchhhhcc
Q 020863 10 TWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFK 89 (320)
Q Consensus 10 ~WR~~f~i~~~~~l~~~~~~~~lpESp~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 89 (320)
+-+.+|++.+++.++-..+.+++-|.-+ . + +.+..+..+++++++
T Consensus 224 Gk~aPFlVL~~v~Lld~~L~l~vi~p~~-------~-~---------------------------~~~~~~~~~~~~Ll~ 268 (464)
T KOG3764|consen 224 GKSAPFLVLAIVLLLDGALQLLVIEPTE-------M-D---------------------------PDSTEQGTPMWSLLM 268 (464)
T ss_pred CCcCcHHHHHHHHHHHHHHHHheeCccc-------c-C---------------------------ccccccCccHHHHHh
Confidence 5788999999999988888655433210 0 0 001122345677787
Q ss_pred chhhHHHHHHHHHHHHHHhhcCcceeeeehHH----HHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHH
Q 020863 90 SKEIRLAFLAGAGLQAFQQFTGINTVMYYSPT----IVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLA 165 (320)
Q Consensus 90 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~ 165 (320)
+|..+...... ..+.....+.-|+ ..+++. .+.-..+..-++.....++++.+.|.+.||++.-+.+
T Consensus 269 dP~I~~~agai--------~~~n~~lafLePtlslwm~e~m~-~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl 339 (464)
T KOG3764|consen 269 DPYILLIAGAI--------TFSNSSLAFLEPTLSLWMLETMF-TPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWL 339 (464)
T ss_pred CchHhhhhcch--------hhccchHHHhCcccHHHHHHhcc-CCCcceeeeecccccchhccCchHHHHHHhcCchhHH
Confidence 77664332221 1111112222232 233444 2221223344455556778999999999999933333
Q ss_pred HH--HhHHHHHHHHHHHHHHHhcCCCCCCcchh-HHHHHHHHHHHHHHhccccccchhcccccCCcc---chhhhHHHHH
Q 020863 166 LS--SLAGVIISLVLLSWAFISGSSASSSGVYG-WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQ---YRGICGGMSA 239 (320)
Q Consensus 166 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~---~R~~~~gi~~ 239 (320)
.. +......+..++... +...+ ++...+.++.....-....|.. .+.-+.-..+ +=|...++..
T Consensus 340 ~~~~gl~~~G~~~~~iP~~---------~~~~~L~vp~~~l~~~i~~~dasl~P~l-~~lvd~rh~s~~~vYGsVyaIad 409 (464)
T KOG3764|consen 340 LSLGGLATVGVSSGPIPFA---------TSIAQLWVPNFGLGFGIGLADASLIPTL-GYLVDPRHVSGFNVYGSVYAIAD 409 (464)
T ss_pred HHHHHHHHHHHHhchhHhh---------hhHHHHhhhhHHHHHHHHHHHHHHhhhh-HHhcchhhccccceeeeHHHHHH
Confidence 22 222111111111111 11111 2222222222222111112211 1111211112 3456667766
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHH
Q 020863 240 TVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVV 278 (320)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 278 (320)
..-.++..+++.+-..+.+..|+.+...+.+...++.+-
T Consensus 410 ~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyap 448 (464)
T KOG3764|consen 410 AAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAP 448 (464)
T ss_pred HHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHH
Confidence 666667777777777777778876655555555444433
No 240
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=95.74 E-value=0.87 Score=42.21 Aligned_cols=45 Identities=16% Similarity=0.196 Sum_probs=31.6
Q ss_pred HHHhccccccchhcccccCCccchhhhHHHHHHHH-HHHHHHHHHH
Q 020863 208 AFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVN-WISNLIVAQT 252 (320)
Q Consensus 208 ~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~-~~~~~~~~~~ 252 (320)
...-.-.+|+..+..+++.|++.|+...|+-.... .+++.+++.+
T Consensus 388 t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~ 433 (493)
T PRK15462 388 GFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVI 433 (493)
T ss_pred HHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344457888899999999999999988865533 4555555443
No 241
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=95.43 E-value=0.85 Score=38.03 Aligned_cols=22 Identities=23% Similarity=0.794 Sum_probs=17.7
Q ss_pred CchHHHHhhhhHHHHHHHHHhh
Q 020863 9 GTWRWMLGVSAVPAIIQFVLML 30 (320)
Q Consensus 9 ~~WR~~f~i~~~~~l~~~~~~~ 30 (320)
.+||+.+.+.+++.++-++...
T Consensus 38 ~~W~~I~si~~lL~~IpLIly~ 59 (267)
T PF07672_consen 38 NNWQWILSIFILLIFIPLILYI 59 (267)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4699999999988887776643
No 242
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.34 E-value=2.2 Score=39.03 Aligned_cols=127 Identities=15% Similarity=0.166 Sum_probs=58.7
Q ss_pred hCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhh---hcchHHHHHHhHHHHHHHHHHHHHHHhcC----CCCCC---cch
Q 020863 126 AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDH---FGRKKLALSSLAGVIISLVLLSWAFISGS----SASSS---GVY 195 (320)
Q Consensus 126 ~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr---~grR~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~---~~~ 195 (320)
.+.+.........+..+...+++.+..+.+.+| +||++....+.....+..++.......-. +.... ...
T Consensus 273 ~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~ 352 (461)
T KOG3098|consen 273 LGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPS 352 (461)
T ss_pred ccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccc
Confidence 343333333444555555566667777777655 66777666554443333333222111000 00000 000
Q ss_pred hHHHHHHHHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHH
Q 020863 196 GWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFL 254 (320)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~ 254 (320)
..+.+++. +...+.=.-...+.+.+...++ ++.|..+.++.-....+.+.++....+
T Consensus 353 ~~~~~ii~-~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 353 YYLALIIG-FLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSP 409 (461)
T ss_pred hhHHHHHH-HHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhh
Confidence 11222211 1111211122345567778888 455877777776666666554433333
No 243
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=95.20 E-value=0.046 Score=50.05 Aligned_cols=126 Identities=16% Similarity=0.084 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhcccccc
Q 020863 138 SLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPV 217 (320)
Q Consensus 138 ~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (320)
.+...+..++..+..+++++|+|+-+++..++.+...=. ..++..+++ |..+..-.+-.+..+.. +..
T Consensus 412 ~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf----~~~S~L~n~-------W~vLPieilqgit~ali-Waa 479 (618)
T KOG3762|consen 412 SALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRF----LYYSYLQNP-------WMVLPIEILQGITHALI-WAA 479 (618)
T ss_pred hhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHH----HHHHHhcCc-------hheeeHHHHHHHHHHHH-HHH
Confidence 333344466778888999999999887654433222211 122222222 22221111111222211 222
Q ss_pred chhcccccCCccchhhhHHHHHHHHH-HHHHHHHHHHHHHHHHhcchhHHHHHHHHHHH
Q 020863 218 PWTLNSEVYPEQYRGICGGMSATVNW-ISNLIVAQTFLTVAELVGTGATFLILAGIAVL 275 (320)
Q Consensus 218 ~~~~~~ElfP~~~R~~~~gi~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 275 (320)
..+|++...|++.|+++.|+....-. +|-.+|+.+-..+.+..+....|-.++..+++
T Consensus 480 ~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~ 538 (618)
T KOG3762|consen 480 IISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLV 538 (618)
T ss_pred HHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHH
Confidence 34788899999999999988654422 22223333333344445544445444444443
No 244
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=95.18 E-value=2.6 Score=38.87 Aligned_cols=41 Identities=5% Similarity=0.023 Sum_probs=35.1
Q ss_pred cchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 020863 217 VPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVA 257 (320)
Q Consensus 217 ~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~ 257 (320)
+.|..++|+++.+.-.+-.++....++++.++++.+...+.
T Consensus 149 lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 149 LFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66899999999988888999999999999999887766554
No 245
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=95.15 E-value=0.65 Score=41.52 Aligned_cols=135 Identities=14% Similarity=0.037 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHHhhhcchHHHHHHhHHHH-HHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccchhccc
Q 020863 145 NAVGTIVGIYLIDHFGRKKLALSSLAGVI-ISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNS 223 (320)
Q Consensus 145 ~~~~~l~~g~l~Dr~grR~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (320)
.++-+++-|-++|+-|+|+-....+.... ++...+.+ . .+. +. +...+.+.........+......++.+
T Consensus 71 ia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~---i-~~~--s~---~~~~l~~~il~~i~~~~s~Vfyds~L~ 141 (438)
T COG2270 71 IALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWF---I-PPG--SY---LLLLLLFLILASIGFEFSNVFYDSMLP 141 (438)
T ss_pred HHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHH---h-CCC--ch---HHHHHHHHHHHHHhcchhheehhhHhh
Confidence 44556677899999998876553332222 22222211 1 111 11 222222222222222223344457888
Q ss_pred ccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHH------------------HHhcchhHHHHHHHHHHHHHHHHHhhcc
Q 020863 224 EVYPEQYRGICGGMSATVNWISNLIVAQTFLTVA------------------ELVGTGATFLILAGIAVLAVVFVILFVP 285 (320)
Q Consensus 224 ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~------------------~~~g~~~~~~~~~~~~~~~~~~~~~~~p 285 (320)
++.+++.-++.+++....+.+++.+.-....... +......++.+.++..++..+-.++..|
T Consensus 142 ~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~ 221 (438)
T COG2270 142 RLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMILNVH 221 (438)
T ss_pred hhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHHhccc
Confidence 8888877777777776666666654322211110 1111234555666666666666666666
Q ss_pred cCC
Q 020863 286 ETQ 288 (320)
Q Consensus 286 et~ 288 (320)
+..
T Consensus 222 ~~~ 224 (438)
T COG2270 222 DAE 224 (438)
T ss_pred ccc
Confidence 554
No 246
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=94.90 E-value=0.087 Score=48.07 Aligned_cols=50 Identities=14% Similarity=0.092 Sum_probs=25.4
Q ss_pred hcCcceeeeehHHHHHHhCCCCc-HHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 020863 109 FTGINTVMYYSPTIVQMAGFQSN-QLALLLSLAVAGTNAVGTIVGIYLIDHF 159 (320)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~l~~g~l~Dr~ 159 (320)
.+|++-+..|...+-+....+.+ ..+... ......++++++..|++-.+.
T Consensus 275 ~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~ve-A~~tllga~~a~~ag~~~~~w 325 (511)
T TIGR00806 275 SAGYYLITYYVHTLWGTLDESLNKYNGAVD-AASTLLGAITSFIAGFVNIRW 325 (511)
T ss_pred hhHHHHHHHHHHHHHHHcCCCccccCCHHH-HHHHHHHHHHHHHHHhhcCCc
Confidence 34555555566666655533221 112222 233334677888888884444
No 247
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=94.41 E-value=2.8 Score=38.52 Aligned_cols=121 Identities=17% Similarity=0.259 Sum_probs=71.5
Q ss_pred HHhCCCCcHHHHHHHHHHHHHHHHHHHHHH-HHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHH
Q 020863 124 QMAGFQSNQLALLLSLAVAGTNAVGTIVGI-YLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIG 202 (320)
Q Consensus 124 ~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g-~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (320)
..++.+....+........ ...++.++.. .+...+|-|+....+...-.+......+. +. . |.....
T Consensus 270 ~~f~w~~~~~s~~~~~~~~-~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~--~~------~---w~~~~~ 337 (463)
T KOG2816|consen 270 AKFGWNKKEFSDLLSLVSI-LGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFA--TE------T---WMMFAA 337 (463)
T ss_pred eecCcCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHh--cc------c---hhhhHH
Confidence 3456665555544443333 3566666554 78888998886665555444444443332 11 1 111111
Q ss_pred HHHHHHHHhccccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 020863 203 LALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAE 258 (320)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~ 258 (320)
..+ ..+.....+...+..+-+..++.+|++.++...+..+.+++++..+..+..
T Consensus 338 ~v~--~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 338 GVV--VALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred HHH--HHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 111 112223344555677778889999999999999988988888888776644
No 248
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=93.88 E-value=0.034 Score=49.79 Aligned_cols=131 Identities=14% Similarity=0.097 Sum_probs=62.1
Q ss_pred eehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhh----hcchHHHHH-HhHHHHHHHHHHHHHHHh----cC
Q 020863 117 YYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDH----FGRKKLALS-SLAGVIISLVLLSWAFIS----GS 187 (320)
Q Consensus 117 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr----~grR~~~~~-~~~~~~~~~~~~~~~~~~----~~ 187 (320)
.|.|-++++.|...+-.+. .....-+.+.+..++.|..+|| +||||.++. +.....++++.+.+.-.. ..
T Consensus 53 sy~tPyl~~lGvphk~~S~-iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd 131 (498)
T KOG0637|consen 53 SYLTPYLQSLGVPHKWSSI-IWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGD 131 (498)
T ss_pred ccccHHHHHcCCCcccccc-cccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcC
Confidence 3455566777765432211 1122222345666778899995 898886543 333444444444333211 11
Q ss_pred CCCC--CcchhHHHHHHHHHHHHHHhccccccchhcccccCCccchhh-hHHHHHHHHHHHHHHH
Q 020863 188 SASS--SGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGI-CGGMSATVNWISNLIV 249 (320)
Q Consensus 188 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP~~~R~~-~~gi~~~~~~~~~~~~ 249 (320)
.... ......+.++++.++-.....-.+| .-++..++.-.+.+.+ +.+.......+|+.++
T Consensus 132 ~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp-~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLG 195 (498)
T KOG0637|consen 132 NERKPVKPRAIVLFILGFWLLDVANNTLQGP-CRALLADLARGDAKKTRANSVFSFFMAVGNVLG 195 (498)
T ss_pred CcccccchHHHHHHHHHhHHHHhhhhhhhhh-HHHHHHHhccChhhhhccchhHHHHHHhcceee
Confidence 1111 1111222333333332222122222 2467788886666655 6655555555555543
No 249
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=93.77 E-value=0.011 Score=55.26 Aligned_cols=64 Identities=19% Similarity=0.040 Sum_probs=0.0
Q ss_pred eeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHH
Q 020863 115 VMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLL 179 (320)
Q Consensus 115 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~ 179 (320)
...-.+++.+.+++++.+.+. .....-+..++..++..++.+|-.|-+++..+.+..+++.++.
T Consensus 22 ~~~~lttiErRF~l~S~~~G~-i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~ 85 (539)
T PF03137_consen 22 VNSSLTTIERRFGLSSSQSGL-ISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLF 85 (539)
T ss_dssp -----------------------------------------------------------------
T ss_pred HHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHH
Confidence 334456788888988776544 4445555566777777788888555556666655555555444
No 250
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=93.65 E-value=0.82 Score=31.03 Aligned_cols=61 Identities=20% Similarity=0.157 Sum_probs=41.8
Q ss_pred ehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHH
Q 020863 118 YSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLL 179 (320)
Q Consensus 118 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~ 179 (320)
..|.+.++.+++..+. .+....+.+...+|.+...++.++..+|+.+..+.+.+.++...+
T Consensus 14 lLP~M~~~~~ls~~~a-g~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~m 74 (85)
T PF06779_consen 14 LLPLMQADGGLSLSQA-GWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAM 74 (85)
T ss_pred HhHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 4577888888876654 445556667788888888888888776777666655554444433
No 251
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=93.23 E-value=6 Score=35.64 Aligned_cols=34 Identities=21% Similarity=0.161 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHH
Q 020863 146 AVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLL 179 (320)
Q Consensus 146 ~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~ 179 (320)
.+..+....+.|.+|.|++++...+...++..++
T Consensus 55 l~~l~~vflltd~l~Ykpviil~~~~~i~t~~ll 88 (412)
T PF01770_consen 55 LAFLLPVFLLTDYLRYKPVIILQALSYIITWLLL 88 (412)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 4455667789999999999887666555544443
No 252
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=92.46 E-value=2.4 Score=38.96 Aligned_cols=48 Identities=21% Similarity=0.203 Sum_probs=25.2
Q ss_pred ehHHHHHH--hCCCCcHHHHH--HHHHHHHHHHHHH-HHHHHHHhhhcchHHHH
Q 020863 118 YSPTIVQM--AGFQSNQLALL--LSLAVAGTNAVGT-IVGIYLIDHFGRKKLAL 166 (320)
Q Consensus 118 ~~~~~~~~--~g~~~~~~~~~--~~~~~~~~~~~~~-l~~g~l~Dr~grR~~~~ 166 (320)
-.|.++++ .+.+-.+++.. .+.+... ..+-+ ++=...+.|+|||+..+
T Consensus 22 siPflL~~~~~~~sy~q~~~fSla~~PfSl-KlLWaPiVDs~y~~~~GRRKSWi 74 (544)
T PF13000_consen 22 SIPFLLQSMAKKVSYSQQAIFSLASYPFSL-KLLWAPIVDSVYSKRIGRRKSWI 74 (544)
T ss_pred cchhhhccccCCCChhHheeeeeeechhHH-HHhhhhhhhhhcccccCCcchhh
Confidence 45888887 45443333221 1223333 33333 34456677999998644
No 253
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=92.15 E-value=0.009 Score=50.16 Aligned_cols=41 Identities=5% Similarity=-0.043 Sum_probs=29.3
Q ss_pred hhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020863 219 WTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAEL 259 (320)
Q Consensus 219 ~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~ 259 (320)
..|+.--|.-+.-+.+.|+..+++++|+.+.-.+.+++.+.
T Consensus 158 N~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~ 198 (459)
T KOG4686|consen 158 NKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDT 198 (459)
T ss_pred cceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHH
Confidence 34556667777788899999999999987655555554443
No 254
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=92.02 E-value=8.8 Score=34.41 Aligned_cols=57 Identities=16% Similarity=0.252 Sum_probs=36.2
Q ss_pred HHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHh-hhcchHHHHHHhHHHHHHHHHHH
Q 020863 123 VQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLID-HFGRKKLALSSLAGVIISLVLLS 180 (320)
Q Consensus 123 ~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~D-r~grR~~~~~~~~~~~~~~~~~~ 180 (320)
-+.+|++..+.+... ........+|..+.|++.. |.++++....++..+.++...+.
T Consensus 236 g~Vfgmsv~eTT~Lt-a~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii 293 (403)
T PF03209_consen 236 GEVFGMSVGETTRLT-AFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALII 293 (403)
T ss_pred hHHcCCCHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHH
Confidence 345677776655544 4455556788877777766 67777776666666655555443
No 255
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=91.91 E-value=0.29 Score=43.85 Aligned_cols=30 Identities=17% Similarity=0.289 Sum_probs=20.4
Q ss_pred CCchHHHHhhhhHHHHHHHHHhhcCCCChH
Q 020863 8 PGTWRWMLGVSAVPAIIQFVLMLFMPESPR 37 (320)
Q Consensus 8 ~~~WR~~f~i~~~~~l~~~~~~~~lpESp~ 37 (320)
..+-+.++.++.....+.+++..++|-.++
T Consensus 157 ~~sy~~L~~isl~~~~~a~~~~~fLP~~~~ 186 (412)
T PF01770_consen 157 GVSYFQLNYISLASVSLALLIALFLPMPKR 186 (412)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 345777777777766666666677777654
No 256
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=91.89 E-value=9.8 Score=34.69 Aligned_cols=52 Identities=8% Similarity=0.088 Sum_probs=30.6
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHh
Q 020863 231 RGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVIL 282 (320)
Q Consensus 231 R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 282 (320)
++...+.+..+=-...+++|.+...+....+......+.++..+++.+.=++
T Consensus 147 La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~ 198 (432)
T PF06963_consen 147 LARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYF 198 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444567778887777776666555556666666666554333
No 257
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=91.12 E-value=0.26 Score=45.35 Aligned_cols=57 Identities=9% Similarity=0.133 Sum_probs=41.1
Q ss_pred CcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHH
Q 020863 111 GINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSS 168 (320)
Q Consensus 111 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~ 168 (320)
+...+.-+++.+.+++|++......+...... ..+++.++.|+++||+.+|+.++.+
T Consensus 26 ~~g~l~pll~vy~kQLGl~p~~~Gtl~g~~P~-v~~L~~P~~g~~Adr~r~~r~lllg 82 (618)
T KOG3762|consen 26 RFGSLFPLLAVYFKQLGLNPAVVGTLTGTLPL-VEFLAAPLWGFLADRYRKRRPLLLG 82 (618)
T ss_pred cccccchHHHHHHHHcCCCHHHhhhhhhHHHH-HHHHhHHHHHHHHHHHHhcCchhHH
Confidence 33445556778899999987776555544443 4789999999999999877755443
No 258
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=91.03 E-value=11 Score=34.93 Aligned_cols=42 Identities=10% Similarity=-0.009 Sum_probs=35.8
Q ss_pred cchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 020863 217 VPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAE 258 (320)
Q Consensus 217 ~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~ 258 (320)
+.|..++|+++.+.-.+-.++....++++.++++.......+
T Consensus 164 LFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 164 LFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 468999999999888889999999999999988887776655
No 259
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=90.91 E-value=1.4 Score=38.25 Aligned_cols=70 Identities=17% Similarity=0.151 Sum_probs=46.8
Q ss_pred hhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH----------------hcchhHHHHHHHHHHHHHH-HHH
Q 020863 219 WTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAEL----------------VGTGATFLILAGIAVLAVV-FVI 281 (320)
Q Consensus 219 ~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~-~~~ 281 (320)
..+.+++.|++.+++..++...++.+|.+++|.+...+... .++..+|++.+.+..+..+ +.+
T Consensus 32 n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~yl~ia~~~~~~~i~~~~ 111 (310)
T TIGR01272 32 NPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEAAKVHTPYLLLAGALAVLAIIFAF 111 (310)
T ss_pred HHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46777888888899899999999999999888877765521 2355666655555443333 333
Q ss_pred hhcccCC
Q 020863 282 LFVPETQ 288 (320)
Q Consensus 282 ~~~pet~ 288 (320)
.-+||.+
T Consensus 112 ~~~p~~~ 118 (310)
T TIGR01272 112 LPLPELQ 118 (310)
T ss_pred ccCCCCC
Confidence 3456654
No 260
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=90.49 E-value=16 Score=34.67 Aligned_cols=156 Identities=19% Similarity=0.164 Sum_probs=74.0
Q ss_pred HHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcchHHHHHHhHHHHHHHHHHHHHHHhc---CC------C
Q 020863 120 PTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDH-FGRKKLALSSLAGVIISLVLLSWAFISG---SS------A 189 (320)
Q Consensus 120 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr-~grR~~~~~~~~~~~~~~~~~~~~~~~~---~~------~ 189 (320)
.++....+......+...+ ...+......+++++++|. +||-+.+..+.....++...+....... +. .
T Consensus 62 ~ylt~~~~~~~~~aa~~v~-~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~ 140 (571)
T KOG1237|consen 62 TYLTLELHASGGGAANNVN-AFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPG 140 (571)
T ss_pred HHHHHHhccchHHHHHHHH-HHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCC
Confidence 3444455555433333222 3334456777899999997 5676666655554444443333222111 10 0
Q ss_pred C--CCcchh-HHHHHHHHHHHHHHhcccc---ccchhcccccCCccc----hh--hhHHHHHHHHHHHHHHHHHHHHHHH
Q 020863 190 S--SSGVYG-WIAVIGLALYIAFFAPGMG---PVPWTLNSEVYPEQY----RG--ICGGMSATVNWISNLIVAQTFLTVA 257 (320)
Q Consensus 190 ~--~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~ElfP~~~----R~--~~~gi~~~~~~~~~~~~~~~~~~~~ 257 (320)
. ...... ...++...+. ..+.|.+ +-.....+|-|+... +. +-........+++..++..+..+..
T Consensus 141 ~~~c~~~s~~q~~~~~~~l~--lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq 218 (571)
T KOG1237|consen 141 GNVCESPSKLQLAVLYGALY--LIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQ 218 (571)
T ss_pred CCcccCcchHHHHHHHHHHH--HheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhh
Confidence 0 011111 1111111111 1222332 333466778887322 22 2233334445566666666666665
Q ss_pred HHhcchhHHHHHHHHHHHHHH
Q 020863 258 ELVGTGATFLILAGIAVLAVV 278 (320)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~ 278 (320)
+..+|...|.+..+...++.+
T Consensus 219 ~~~~w~lgf~i~~~~~~lai~ 239 (571)
T KOG1237|consen 219 DNVGWKLGFGIPTVLNALAIL 239 (571)
T ss_pred hcccceeeccHHHHHHHHHHH
Confidence 667777777666555555444
No 261
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=90.44 E-value=3.4 Score=36.76 Aligned_cols=46 Identities=20% Similarity=0.218 Sum_probs=26.7
Q ss_pred ehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHh-----hhcchHHHH
Q 020863 118 YSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLID-----HFGRKKLAL 166 (320)
Q Consensus 118 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~D-----r~grR~~~~ 166 (320)
-.|.+++.-+.+-.+++.......- .---++...++| |+|||+..+
T Consensus 52 ~iP~lL~ak~vSyt~~a~fS~ay~P---~sLKllWaPiVDs~y~k~~GrrksWv 102 (510)
T KOG3574|consen 52 AIPLLLQAKGVSYTSQAIFSFAYWP---FSLKLLWAPIVDSVYSKRFGRRKSWV 102 (510)
T ss_pred hhHHHhcCCCcchhhhhhhhhhhhH---HHHHHHHHhhhHHHHHHhhcccccee
Confidence 5788898777765554433221110 111345556677 999998644
No 262
>PRK03612 spermidine synthase; Provisional
Probab=90.06 E-value=15 Score=34.46 Aligned_cols=23 Identities=9% Similarity=0.148 Sum_probs=14.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Q 020863 234 CGGMSATVNWISNLIVAQTFLTV 256 (320)
Q Consensus 234 ~~gi~~~~~~~~~~~~~~~~~~~ 256 (320)
..|-....+.+|+++|+.+...+
T Consensus 146 ~~g~ly~~ntlGa~~G~l~~~~v 168 (521)
T PRK03612 146 NVATVLAADYLGALVGGLAFPFL 168 (521)
T ss_pred hhhhhHhHHhHHHHHHHHHHHHH
Confidence 44555666777777776665543
No 263
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=89.29 E-value=4.8 Score=38.96 Aligned_cols=79 Identities=19% Similarity=0.021 Sum_probs=42.1
Q ss_pred HHHHHHHHhhcCcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHH
Q 020863 100 GAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLL 179 (320)
Q Consensus 100 ~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~ 179 (320)
...+..+.|.....++..-.+++-+.+++++.+.+. .....-+...+......|+..|..|-+++-.+.+..++..++.
T Consensus 101 ~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~-I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~ 179 (735)
T KOG3626|consen 101 LLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGL-IASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLF 179 (735)
T ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCccee-EeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHH
Confidence 333334444333333334455677777887665433 2223333355556666788888666666655555554444433
No 264
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=88.10 E-value=6.4 Score=35.31 Aligned_cols=27 Identities=4% Similarity=-0.021 Sum_probs=18.5
Q ss_pred ccchhcccccCCccchhhhHHHHHHHH
Q 020863 216 PVPWTLNSEVYPEQYRGICGGMSATVN 242 (320)
Q Consensus 216 ~~~~~~~~ElfP~~~R~~~~gi~~~~~ 242 (320)
+....++++-.|++.+..++.++...-
T Consensus 362 sl~m~~aPk~v~~~e~e~aG~~m~~fl 388 (406)
T KOG1479|consen 362 SLIMMYAPKQVKPSEKEAAGNLMVFFL 388 (406)
T ss_pred hheehhcCCCCChHHHHHHHHHHHHHH
Confidence 455678888898888876665554443
No 265
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=87.28 E-value=6.5 Score=34.97 Aligned_cols=64 Identities=19% Similarity=0.017 Sum_probs=45.9
Q ss_pred ccchhcccccCCcc---chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHH
Q 020863 216 PVPWTLNSEVYPEQ---YRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVF 279 (320)
Q Consensus 216 ~~~~~~~~ElfP~~---~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 279 (320)
+......+|.|+++ .|.+.........++|+.++....+.+.+..||...|.+.++..+++.+.
T Consensus 52 ~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~ 118 (372)
T PF00854_consen 52 PNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIV 118 (372)
T ss_dssp HHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHH
Confidence 33446777888765 34456666677788999888888888888888888888877766666553
No 266
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=86.69 E-value=17 Score=33.22 Aligned_cols=35 Identities=11% Similarity=0.130 Sum_probs=22.9
Q ss_pred ccchhcccccCCccchhhhHHHHHHHHHHHHHHHH
Q 020863 216 PVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVA 250 (320)
Q Consensus 216 ~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~ 250 (320)
.....+.++..+++.|..+..++...-..|-..|+
T Consensus 391 s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs 425 (437)
T TIGR00939 391 SLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGA 425 (437)
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456778888888898877776655555544443
No 267
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=86.35 E-value=0.18 Score=43.65 Aligned_cols=30 Identities=7% Similarity=0.082 Sum_probs=2.0
Q ss_pred ccchhcccccCCccchhhhHHHHHHHHHHH
Q 020863 216 PVPWTLNSEVYPEQYRGICGGMSATVNWIS 245 (320)
Q Consensus 216 ~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~ 245 (320)
.....+.++..+++.|..+..++...-..|
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~G 296 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFG 296 (309)
T ss_dssp HHHH--------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 345677788888888877766655444333
No 268
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=85.23 E-value=27 Score=32.17 Aligned_cols=109 Identities=9% Similarity=-0.070 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhcc
Q 020863 134 ALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPG 213 (320)
Q Consensus 134 ~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (320)
.+....+......+++++++.+.|++|.|..+..+..+... ..+. +...+ . +....+-.+.....+.
T Consensus 52 Gy~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~--f~~g--fl~~N-----~---y~~yfssallG~Gaal- 118 (461)
T KOG3098|consen 52 GYYGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAA--FPLG--FLFPN-----S---YYLYFSSALLGFGAAL- 118 (461)
T ss_pred cHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHH--HHHH--HHhcc-----h---HHHHHHHHHhhhhHHh-
Confidence 34444555666789999999999999999987755433222 2222 22211 1 2222222222222221
Q ss_pred ccccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHH
Q 020863 214 MGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLT 255 (320)
Q Consensus 214 ~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~ 255 (320)
.+.-...|.+|-.+.+.+.+-.++.-++...+.++|+..+..
T Consensus 119 lw~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~ 160 (461)
T KOG3098|consen 119 LWTGQGGYLTSNSTRETIERNISIFWAIGQSSLIIGGIILFI 160 (461)
T ss_pred eecccceehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhhee
Confidence 122334688899999988888998888888887777655443
No 269
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=81.80 E-value=23 Score=31.34 Aligned_cols=56 Identities=13% Similarity=0.075 Sum_probs=28.9
Q ss_pred hcCcceeeeehHHHHHHhCCCCcHH-HHHHHHHHHHHHHHHHHHHHHHHhhhcchHH
Q 020863 109 FTGINTVMYYSPTIVQMAGFQSNQL-ALLLSLAVAGTNAVGTIVGIYLIDHFGRKKL 164 (320)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~l~~g~l~Dr~grR~~ 164 (320)
.+|++-+.+|...+-++..-.+.+. -...-......++++.+..|++--+..|++-
T Consensus 247 scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~ 303 (433)
T KOG3810|consen 247 SCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGD 303 (433)
T ss_pred hchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhH
Confidence 4566656666666666554222111 0111112233356778888888666666643
No 270
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=81.08 E-value=45 Score=30.59 Aligned_cols=16 Identities=13% Similarity=0.121 Sum_probs=7.9
Q ss_pred HHHHHHHHHHHhhhcc
Q 020863 146 AVGTIVGIYLIDHFGR 161 (320)
Q Consensus 146 ~~~~l~~g~l~Dr~gr 161 (320)
.+..+.--.+..|+..
T Consensus 59 l~~~~~~~~~~~~i~~ 74 (437)
T TIGR00939 59 LLFNSLNLFLIFRIPV 74 (437)
T ss_pred HHHHHHHHHHhhccCc
Confidence 3344444455556554
No 271
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=80.32 E-value=13 Score=33.58 Aligned_cols=16 Identities=6% Similarity=0.266 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHhhhc
Q 020863 145 NAVGTIVGIYLIDHFG 160 (320)
Q Consensus 145 ~~~~~l~~g~l~Dr~g 160 (320)
..+..+++.++.+|+.
T Consensus 72 ~l~~Kl~aP~fi~~v~ 87 (402)
T PF02487_consen 72 SLLVKLIAPFFIHRVP 87 (402)
T ss_pred HHHHHHHhHhhhhhcc
Confidence 3455667788889875
No 272
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=80.24 E-value=12 Score=33.74 Aligned_cols=38 Identities=16% Similarity=0.064 Sum_probs=24.0
Q ss_pred cccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHH
Q 020863 215 GPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQT 252 (320)
Q Consensus 215 ~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~ 252 (320)
+...+..+.|-.|++.|-.+.|.....-.+|..+++.+
T Consensus 353 YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll 390 (402)
T PF02487_consen 353 YVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLL 390 (402)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 33344555677788999888887665555555444443
No 273
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=77.42 E-value=61 Score=30.07 Aligned_cols=139 Identities=14% Similarity=0.040 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHhhhcch---H----HHHHHhHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhccccccc
Q 020863 146 AVGTIVGIYLIDHFGRK---K----LALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVP 218 (320)
Q Consensus 146 ~~~~l~~g~l~Dr~grR---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (320)
++.+++..++..++++| + -+..+...+.++.+.+.............. ....++...++..+.-.-.+++.
T Consensus 338 ii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~--s~~~lil~y~l~s~gEL~iSpvG 415 (498)
T COG3104 338 ILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLV--SVWWLVLSYVLQSFGELFISPVG 415 (498)
T ss_pred HHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCc--CHHHHHHHHHHHHHHHHHhCHHH
Confidence 34555556777775554 1 123333444444444433312222111111 11222222333334444456777
Q ss_pred hhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHH------HHHHhcchhHHHHHHHHHHHHHHHHHhhccc
Q 020863 219 WTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLT------VAELVGTGATFLILAGIAVLAVVFVILFVPE 286 (320)
Q Consensus 219 ~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pe 286 (320)
-.+...+.|+...+...++-......++.++..+... ..+.......|..++...++..+......|.
T Consensus 416 Ls~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~~~ 489 (498)
T COG3104 416 LSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLLLLSPK 489 (498)
T ss_pred HHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhhHH
Confidence 7788889999888777766554455555554443331 1222223345555555555444444443333
No 274
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=74.74 E-value=7.6 Score=35.82 Aligned_cols=58 Identities=17% Similarity=0.212 Sum_probs=38.6
Q ss_pred hhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHH
Q 020863 219 WTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLA 276 (320)
Q Consensus 219 ~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 276 (320)
..+-+|+.-++..++..|+....+..+..+++..-.......|......+.++..++.
T Consensus 410 ~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~ 467 (488)
T KOG2325|consen 410 DTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVV 467 (488)
T ss_pred HHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHH
Confidence 4566788888888888887777777777777666666666677665555444443333
No 275
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=70.16 E-value=37 Score=25.93 Aligned_cols=36 Identities=11% Similarity=0.083 Sum_probs=23.0
Q ss_pred hccccccchhcccccCCccchhhhHHHHHHHHHHHH
Q 020863 211 APGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISN 246 (320)
Q Consensus 211 ~~~~~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~ 246 (320)
+.|...+.|-+.+-.-.++.-|+..|+-..-.+++.
T Consensus 108 g~gllGisYGilSaSWD~~r~GSllG~~e~~~N~~r 143 (153)
T PF11947_consen 108 GLGLLGISYGILSASWDPEREGSLLGWEEFKRNWGR 143 (153)
T ss_pred HHHHHhhhhhhcccccCCCCCCCcccHHHHHHhHHH
Confidence 334445556666666667768888888766655554
No 276
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=68.20 E-value=93 Score=28.13 Aligned_cols=8 Identities=25% Similarity=0.966 Sum_probs=4.0
Q ss_pred ccCCccch
Q 020863 224 EVYPEQYR 231 (320)
Q Consensus 224 ElfP~~~R 231 (320)
-.+|.+.-
T Consensus 143 ~~~P~~yt 150 (406)
T KOG1479|consen 143 GLFPSEYT 150 (406)
T ss_pred hcCCHHHH
Confidence 34466543
No 277
>PF14715 FixP_N: N-terminal domain of cytochrome oxidase-cbb3, FixP
Probab=66.97 E-value=9.5 Score=23.04 Aligned_cols=30 Identities=23% Similarity=0.318 Sum_probs=23.4
Q ss_pred cCCCchHHHHhhhhHHHHHHHHHhhcCCCC
Q 020863 6 QVPGTWRWMLGVSAVPAIIQFVLMLFMPES 35 (320)
Q Consensus 6 ~~~~~WR~~f~i~~~~~l~~~~~~~~lpES 35 (320)
.+|--|.++|+++.+.+++.++....++.+
T Consensus 19 plP~ww~~~f~~tivfa~~Y~~~yp~~~~~ 48 (51)
T PF14715_consen 19 PLPRWWLWLFYGTIVFAVGYLVLYPGLGNW 48 (51)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhccCcc
Confidence 356679999999999999988876555543
No 278
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=64.63 E-value=23 Score=26.55 Aligned_cols=17 Identities=18% Similarity=0.214 Sum_probs=12.6
Q ss_pred cccCCccchhhhHHHHH
Q 020863 223 SEVYPEQYRGICGGMSA 239 (320)
Q Consensus 223 ~ElfP~~~R~~~~gi~~ 239 (320)
.|++|+..|........
T Consensus 59 kDm~Pp~~R~~i~~~~s 75 (145)
T TIGR00986 59 KDIVPPTTRGWIYHKYS 75 (145)
T ss_pred HhhCCHHHHHHHHHHHH
Confidence 59999999976655433
No 279
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=60.86 E-value=38 Score=24.05 Aligned_cols=23 Identities=17% Similarity=0.105 Sum_probs=14.5
Q ss_pred HHHHHHHHHHhh-hcchHHHHHHh
Q 020863 147 VGTIVGIYLIDH-FGRKKLALSSL 169 (320)
Q Consensus 147 ~~~l~~g~l~Dr-~grR~~~~~~~ 169 (320)
+.....||+.|| .|.+++.++.+
T Consensus 57 lVGa~iG~llD~~agTsPwglIv~ 80 (116)
T COG5336 57 LVGAGIGWLLDKFAGTSPWGLIVF 80 (116)
T ss_pred HHHHHHHHHHHHhcCCCcHHHHHH
Confidence 334455799998 56777655433
No 280
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=60.74 E-value=54 Score=27.44 Aligned_cols=30 Identities=23% Similarity=0.179 Sum_probs=18.2
Q ss_pred cccCCC-CCHHHHHHHHhcccccccCcchhh
Q 020863 284 VPETQG-LTFLEVEQMWKERAWGSSLNTESL 313 (320)
Q Consensus 284 ~pet~g-~~~~~~~~~~~~~~~~~~~~~~~~ 313 (320)
+++.+| +.++|.|++.+++....+...+..
T Consensus 154 ~~~~~~~eE~eEVe~el~~~~~~~~~~~~~~ 184 (294)
T KOG2881|consen 154 MSPSEGQEELEEVEAELAKREDELDRLEEGL 184 (294)
T ss_pred CCCccchhhHHHHHHHHHhccchhhhhhhcC
Confidence 456666 567888888877665433333333
No 281
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=56.72 E-value=99 Score=27.54 Aligned_cols=11 Identities=36% Similarity=0.564 Sum_probs=5.2
Q ss_pred HHHHHHHHhhh
Q 020863 149 TIVGIYLIDHF 159 (320)
Q Consensus 149 ~l~~g~l~Dr~ 159 (320)
.++.||+..|.
T Consensus 12 ii~~G~~~~~~ 22 (385)
T PF03547_consen 12 IILLGYLLGRF 22 (385)
T ss_pred HHHHHHHHHHh
Confidence 33445555543
No 282
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=52.72 E-value=27 Score=24.75 Aligned_cols=35 Identities=14% Similarity=0.140 Sum_probs=22.7
Q ss_pred HHhcchhHHHHHHHHHHHHHHHHHhhcccCCCCCH
Q 020863 258 ELVGTGATFLILAGIAVLAVVFVILFVPETQGLTF 292 (320)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~g~~~ 292 (320)
+.-++..++++...++++.+.+.+.+.|||.-++-
T Consensus 55 d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~i~~W 89 (105)
T PF10183_consen 55 DWEGWELPFFFGFSGSLVFGGVFLAYKPDTSIQTW 89 (105)
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHH
Confidence 34456667666555555555556778999976654
No 283
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=51.39 E-value=28 Score=25.25 Aligned_cols=28 Identities=14% Similarity=0.145 Sum_probs=16.2
Q ss_pred hHHHHhhhhHH-----HH-HHHHHhhcCCCChHH
Q 020863 11 WRWMLGVSAVP-----AI-IQFVLMLFMPESPRW 38 (320)
Q Consensus 11 WR~~f~i~~~~-----~l-~~~~~~~~lpESp~~ 38 (320)
-|..|++..+. ++ +.+++++.+|+-|.-
T Consensus 36 VRl~~vl~~~~~~~~~~~~~Yi~l~~~lp~~P~~ 69 (118)
T PRK10697 36 VRIIVVLSIFFGLFVFTLVAYIILSFALDPMPDN 69 (118)
T ss_pred HHHHHHHHHHHhhchHHHHHHHHHHHhccCCccc
Confidence 46666554332 23 345567778888744
No 284
>PF04024 PspC: PspC domain; InterPro: IPR007168 This domain is found in Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.
Probab=50.49 E-value=17 Score=22.90 Aligned_cols=29 Identities=24% Similarity=0.506 Sum_probs=19.1
Q ss_pred CCchHHHHhhhhHHH----HHHHHHhhcCCCCh
Q 020863 8 PGTWRWMLGVSAVPA----IIQFVLMLFMPESP 36 (320)
Q Consensus 8 ~~~WR~~f~i~~~~~----l~~~~~~~~lpESp 36 (320)
+.-+|..|.+..+.+ ++.++.+..+|+.|
T Consensus 28 ~~~vRl~~v~l~~~~~~~~l~Y~~~w~~lP~~~ 60 (61)
T PF04024_consen 28 PTLVRLIFVVLTFFTGGGILLYLILWLLLPKEP 60 (61)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCC
Confidence 345888888766643 34555667788876
No 285
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=49.67 E-value=87 Score=23.48 Aligned_cols=17 Identities=12% Similarity=0.388 Sum_probs=12.8
Q ss_pred cccCCccchhhhHHHHH
Q 020863 223 SEVYPEQYRGICGGMSA 239 (320)
Q Consensus 223 ~ElfP~~~R~~~~gi~~ 239 (320)
.|++|+..|....+..+
T Consensus 61 kdi~P~~~R~~i~~~~~ 77 (137)
T PF04281_consen 61 KDIFPPSVRNWISSTVS 77 (137)
T ss_pred hccCCHHHHHHHHHHHH
Confidence 59999999976655443
No 286
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=47.21 E-value=1.9e+02 Score=24.95 Aligned_cols=19 Identities=26% Similarity=0.169 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHhhhcchHH
Q 020863 146 AVGTIVGIYLIDHFGRKKL 164 (320)
Q Consensus 146 ~~~~l~~g~l~Dr~grR~~ 164 (320)
.+...+.|-++||.|||+.
T Consensus 86 mLFGtivgSLaDkqGRKra 104 (454)
T KOG4332|consen 86 MLFGTIVGSLADKQGRKRA 104 (454)
T ss_pred HHHHHHHHHHHhhhccccc
Confidence 3444566789999999985
No 287
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=46.12 E-value=2.6e+02 Score=26.31 Aligned_cols=40 Identities=10% Similarity=-0.019 Sum_probs=27.7
Q ss_pred cccchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHH
Q 020863 215 GPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFL 254 (320)
Q Consensus 215 ~~~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~ 254 (320)
.....+.-+.+..+.+-|+...+-|++.|+|+---..+..
T Consensus 423 FVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL 462 (544)
T PF13000_consen 423 FVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVL 462 (544)
T ss_pred HHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHH
Confidence 3333456678888899999998888888888754333333
No 288
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=43.71 E-value=29 Score=31.21 Aligned_cols=37 Identities=8% Similarity=0.040 Sum_probs=27.4
Q ss_pred chhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHH
Q 020863 218 PWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFL 254 (320)
Q Consensus 218 ~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~ 254 (320)
..+..+.+.|+.+-|+...+-++..++|+..-..+..
T Consensus 390 ~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l 426 (510)
T KOG3574|consen 390 GMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVAL 426 (510)
T ss_pred HHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHH
Confidence 3456678999999999999988888887654333333
No 289
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=38.72 E-value=2.4e+02 Score=23.75 Aligned_cols=33 Identities=12% Similarity=0.108 Sum_probs=17.4
Q ss_pred hhcccccCCccchhhhHHHHHHHHHHHHHHHHH
Q 020863 219 WTLNSEVYPEQYRGICGGMSATVNWISNLIVAQ 251 (320)
Q Consensus 219 ~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~ 251 (320)
|+..+-..-+-+|..+.|+...+-...+.+.+.
T Consensus 65 W~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw 97 (254)
T PF07857_consen 65 WATGNILVVPIIKTIGLGLGMLIWGSVNCLTGW 97 (254)
T ss_pred hhcCceeehhHhhhhhhHHHHHHHHHHHHHHHH
Confidence 444445555666766666655544444444433
No 290
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=37.46 E-value=40 Score=28.56 Aligned_cols=45 Identities=24% Similarity=0.236 Sum_probs=29.2
Q ss_pred hHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHH---------HHHHhhhcchHH
Q 020863 119 SPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVG---------IYLIDHFGRKKL 164 (320)
Q Consensus 119 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~---------g~l~Dr~grR~~ 164 (320)
+..++++.|.++.+.+ ..+++..+..++..++. -+..||+|||..
T Consensus 40 lllfltqiglsp~~~A-mlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~ 93 (412)
T KOG4830|consen 40 LLLFLTQIGLSPSSRA-MLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMS 93 (412)
T ss_pred HHHHHHHhcCCcchhH-HHHHhhHHHHHHhcccccccccccccHHHhhhhcceee
Confidence 3456777888776655 44555555566665554 367889999963
No 291
>cd02432 Nodulin-21_like_1 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_1: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=37.09 E-value=2.3e+02 Score=23.15 Aligned_cols=24 Identities=8% Similarity=0.124 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHhhhcchHHHHHH
Q 020863 145 NAVGTIVGIYLIDHFGRKKLALSS 168 (320)
Q Consensus 145 ~~~~~l~~g~l~Dr~grR~~~~~~ 168 (320)
..+..++.|++.-|+++++.....
T Consensus 174 ~~~aL~~~G~~~a~~~~~~~~~~~ 197 (218)
T cd02432 174 TLLALALTGYVSARLGGASVLRAI 197 (218)
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHH
Confidence 345556667777777776655433
No 292
>PRK10263 DNA translocase FtsK; Provisional
Probab=37.06 E-value=3.8e+02 Score=28.60 Aligned_cols=15 Identities=27% Similarity=0.255 Sum_probs=6.3
Q ss_pred HHHHHHHHHHHhhhc
Q 020863 146 AVGTIVGIYLIDHFG 160 (320)
Q Consensus 146 ~~~~l~~g~l~Dr~g 160 (320)
.+|..++..+..-+|
T Consensus 66 iVGA~LAD~L~~LFG 80 (1355)
T PRK10263 66 MPGAWLADTLFFIFG 80 (1355)
T ss_pred hHHHHHHHHHHHHHh
Confidence 344444444433444
No 293
>PF15061 DUF4538: Domain of unknown function (DUF4538)
Probab=34.75 E-value=45 Score=20.68 Aligned_cols=22 Identities=27% Similarity=0.413 Sum_probs=18.3
Q ss_pred CchHHHHhhhhHHHHHHHHHhh
Q 020863 9 GTWRWMLGVSAVPAIIQFVLML 30 (320)
Q Consensus 9 ~~WR~~f~i~~~~~l~~~~~~~ 30 (320)
-+||..-+++++++++.+.+..
T Consensus 3 rg~r~~~~~ggfVg~iG~a~Yp 24 (58)
T PF15061_consen 3 RGWRYALFVGGFVGLIGAALYP 24 (58)
T ss_pred ccccchhhHHHHHHHHHHHHhh
Confidence 4699999999999998876653
No 294
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=33.89 E-value=72 Score=22.62 Aligned_cols=27 Identities=7% Similarity=0.209 Sum_probs=20.9
Q ss_pred chHHHHhhhhHHHHHHHHHh-hcCCCCh
Q 020863 10 TWRWMLGVSAVPAIIQFVLM-LFMPESP 36 (320)
Q Consensus 10 ~WR~~f~i~~~~~l~~~~~~-~~lpESp 36 (320)
+|+.+|.++..++++.+.+. .+.||+.
T Consensus 58 ~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 58 GWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 79999999888887765554 5678875
No 295
>COG3389 Uncharacterized protein conserved in archaea [Function unknown]
Probab=33.77 E-value=2.7e+02 Score=22.94 Aligned_cols=21 Identities=24% Similarity=0.154 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHhhhcchHHHH
Q 020863 146 AVGTIVGIYLIDHFGRKKLAL 166 (320)
Q Consensus 146 ~~~~l~~g~l~Dr~grR~~~~ 166 (320)
+++...+..++=|+|||+++.
T Consensus 42 Il~atlfill~Ik~~~kwI~r 62 (277)
T COG3389 42 ILVATLFILLAIKLGRKWIFR 62 (277)
T ss_pred HHHHHHHHHhheeecceeeeh
Confidence 444455567777888887654
No 296
>COG1288 Predicted membrane protein [Function unknown]
Probab=33.31 E-value=1.5e+02 Score=27.10 Aligned_cols=20 Identities=20% Similarity=0.091 Sum_probs=14.7
Q ss_pred chHHHHhhhhHHHHHHHHHh
Q 020863 10 TWRWMLGVSAVPAIIQFVLM 29 (320)
Q Consensus 10 ~WR~~f~i~~~~~l~~~~~~ 29 (320)
+||...++.....-+....+
T Consensus 217 ~~Riv~~v~~~~~~i~y~~~ 236 (481)
T COG1288 217 GLRIVVWVVFTLISIIYVYW 236 (481)
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 79999998877666655553
No 297
>COG4736 CcoQ Cbb3-type cytochrome oxidase, subunit 3 [Posttranslational modification, protein turnover, chaperones]
Probab=31.56 E-value=49 Score=20.77 Aligned_cols=24 Identities=8% Similarity=0.036 Sum_probs=12.8
Q ss_pred HHhhcccCCCCCHHHHHHHHhccc
Q 020863 280 VILFVPETQGLTFLEVEQMWKERA 303 (320)
Q Consensus 280 ~~~~~pet~g~~~~~~~~~~~~~~ 303 (320)
.+.+-|+.|++..++....+..++
T Consensus 27 ~~ayr~~~K~~~d~aa~~~l~l~D 50 (60)
T COG4736 27 YFAYRPGKKGEFDEAARGILPLND 50 (60)
T ss_pred HHHhcccchhhHHHHhccCCCCCc
Confidence 456677777665554333344433
No 298
>PF14241 DUF4341: Domain of unknown function (DUF4341)
Probab=29.11 E-value=65 Score=20.30 Aligned_cols=18 Identities=11% Similarity=0.163 Sum_probs=13.9
Q ss_pred CCCchHHHHhhhhHHHHH
Q 020863 7 VPGTWRWMLGVSAVPAII 24 (320)
Q Consensus 7 ~~~~WR~~f~i~~~~~l~ 24 (320)
...+||+.|+++.+.+-.
T Consensus 42 ~~~~W~~~fl~Gl~~g~~ 59 (62)
T PF14241_consen 42 PDRDWRLAFLAGLILGGF 59 (62)
T ss_pred CCccHHHHHHHHHHHHHH
Confidence 345799999998877654
No 299
>COG2119 Predicted membrane protein [Function unknown]
Probab=26.55 E-value=3.1e+02 Score=21.81 Aligned_cols=29 Identities=7% Similarity=0.197 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcchHHHHHHh
Q 020863 141 VAGTNAVGTIVGIYLIDHFGRKKLALSSL 169 (320)
Q Consensus 141 ~~~~~~~~~l~~g~l~Dr~grR~~~~~~~ 169 (320)
...+..++-+.+.++++|+.-|.+...+.
T Consensus 143 ~~l~s~laVl~G~~ia~ki~~r~l~~~aa 171 (190)
T COG2119 143 MILASVLAVLLGKLIAGKLPERLLRFIAA 171 (190)
T ss_pred HHHHHHHHHHHHHHHHccCCHHHHHHHHH
Confidence 33446677788889999999998776543
No 300
>TIGR02978 phageshock_pspC phage shock protein C. All members of this protein family are the phage shock protein PspC. These proteins contain a PspC domain, as do other members of the larger family of proteins described by Pfam model pfam04024. The phage shock regulon is restricted to the Proteobacteria and somewhat sparsely distributed there. It is expressed, under positive control of a sigma-54-dependent transcription factor, PspF, which binds and is modulated by PspA. Stresses that induce the psp regulon include phage secretin overexpression, ethanol, heat shock, and protein export defects.
Probab=26.43 E-value=1e+02 Score=22.55 Aligned_cols=29 Identities=14% Similarity=0.148 Sum_probs=18.0
Q ss_pred chHHHHhhhhHH-----HH-HHHHHhhcCCCChHH
Q 020863 10 TWRWMLGVSAVP-----AI-IQFVLMLFMPESPRW 38 (320)
Q Consensus 10 ~WR~~f~i~~~~-----~l-~~~~~~~~lpESp~~ 38 (320)
-.|..|++..+. .+ +.+++++.+|+-|.-
T Consensus 30 ~VRl~~vl~~~~~~~~~~ll~Y~i~w~~lp~~p~~ 64 (121)
T TIGR02978 30 LVRILVVSALLFGGGFFVLVAYIALWLLLDKKPIN 64 (121)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCccc
Confidence 468887765443 22 245567778888744
No 301
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=25.71 E-value=4.3e+02 Score=24.91 Aligned_cols=11 Identities=27% Similarity=0.428 Sum_probs=7.1
Q ss_pred hhhccchhhHH
Q 020863 85 LDVFKSKEIRL 95 (320)
Q Consensus 85 ~~l~~~~~~~~ 95 (320)
.|.||.|+...
T Consensus 252 gDVFR~P~~~~ 262 (521)
T PF02990_consen 252 GDVFRPPKHPM 262 (521)
T ss_pred HHHhcCcCCch
Confidence 46788777543
No 302
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=25.45 E-value=2.6e+02 Score=20.02 Aligned_cols=33 Identities=15% Similarity=0.268 Sum_probs=22.8
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 020863 228 EQYRGICGGMSATVNWISNLIVAQTFLTVAELV 260 (320)
Q Consensus 228 ~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~~~ 260 (320)
++.++.+.++....-.+++++.+..+.++.+++
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~ 69 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKF 69 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 455666777766777777777777777777654
No 303
>PF14068 YuiB: Putative membrane protein
Probab=25.20 E-value=2.5e+02 Score=19.74 Aligned_cols=28 Identities=25% Similarity=0.259 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchH
Q 020863 135 LLLSLAVAGTNAVGTIVGIYLIDHFGRKK 163 (320)
Q Consensus 135 ~~~~~~~~~~~~~~~l~~g~l~Dr~grR~ 163 (320)
....++.. ++.+|++++|+.++.+.+|.
T Consensus 71 ~~Di~il~-~Gl~GAi~SG~tIr~LRk~G 98 (102)
T PF14068_consen 71 LADILILS-SGLAGAIVSGITIRTLRKKG 98 (102)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHcc
Confidence 33444443 47899999999999886664
No 304
>TIGR00782 ccoP cytochrome c oxidase, cbb3-type, subunit III. This model describes a di-heme subunit of approximately 26 kDa of the cbb3 type copper and heme-containing cytochrome oxidase.
Probab=25.06 E-value=69 Score=27.40 Aligned_cols=27 Identities=22% Similarity=0.359 Sum_probs=22.3
Q ss_pred CCCchHHHHhhhhHHHHHHHHHhhcCC
Q 020863 7 VPGTWRWMLGVSAVPAIIQFVLMLFMP 33 (320)
Q Consensus 7 ~~~~WR~~f~i~~~~~l~~~~~~~~lp 33 (320)
+|--|.++|+++.+.+++.++.+...|
T Consensus 26 ~P~ww~~~f~~~i~~~~~y~~~yp~~~ 52 (285)
T TIGR00782 26 LPRWWLWTFYATIVWGFGYLVAYPAWP 52 (285)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 455799999999999999887776555
No 305
>PF13493 DUF4118: Domain of unknown function (DUF4118); PDB: 2KSF_A.
Probab=24.25 E-value=1.1e+02 Score=21.18 Aligned_cols=18 Identities=33% Similarity=0.438 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHhhhcch
Q 020863 145 NAVGTIVGIYLIDHFGRK 162 (320)
Q Consensus 145 ~~~~~l~~g~l~Dr~grR 162 (320)
..+.+++.|.+.||..||
T Consensus 88 ~l~va~v~g~l~~~~r~~ 105 (105)
T PF13493_consen 88 FLVVALVTGYLADRYRRQ 105 (105)
T ss_dssp HHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHhhC
Confidence 556778889999998876
No 306
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=23.94 E-value=6.1e+02 Score=23.83 Aligned_cols=42 Identities=12% Similarity=0.042 Sum_probs=33.5
Q ss_pred cchhcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 020863 217 VPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAE 258 (320)
Q Consensus 217 ~~~~~~~ElfP~~~R~~~~gi~~~~~~~~~~~~~~~~~~~~~ 258 (320)
+.|..++|++..+.-.+-.++-+..++++.++++.+...+.+
T Consensus 168 lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 168 LFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 457888999988887788888888888888888777666544
No 307
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=22.39 E-value=5.6e+02 Score=22.83 Aligned_cols=51 Identities=16% Similarity=0.144 Sum_probs=23.8
Q ss_pred HHHHhhcCcceeeeehHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 020863 104 QAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLID 157 (320)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~g~l~D 157 (320)
+.+....-+.++..|.|.+... +... ..+.+-+ ...++..+|+.+..++..
T Consensus 253 qslFE~smy~FVflWtPaL~~~-~~~~-P~GlIFs-sFM~a~MlGS~lf~~l~s 303 (354)
T PF05631_consen 253 QSLFEGSMYLFVFLWTPALDPD-DEEL-PLGLIFS-SFMVAMMLGSSLFSRLLS 303 (354)
T ss_pred HHHHHHHHHHheeeeeceecCC-CCCC-CchHHHH-HHHHHHHHHHHHHHHHHh
Confidence 3444444455566778877621 1111 1222222 233445667766654443
No 308
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=22.22 E-value=6.2e+02 Score=23.28 Aligned_cols=35 Identities=17% Similarity=0.229 Sum_probs=22.6
Q ss_pred HHHHHHHHHhhhcchHHHHHHhHHHHHHHHHHHHH
Q 020863 148 GTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWA 182 (320)
Q Consensus 148 ~~l~~g~l~Dr~grR~~~~~~~~~~~~~~~~~~~~ 182 (320)
-++++-++.+.+.+++++..=..+.+++..+....
T Consensus 307 LTF~~fflfE~~~~~~iHpiQY~LVGlAl~lFYlL 341 (430)
T PF06123_consen 307 LTFLAFFLFELLSKLRIHPIQYLLVGLALVLFYLL 341 (430)
T ss_pred HHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHH
Confidence 35666788999999988766555544444444333
No 309
>COG4708 Predicted membrane protein [Function unknown]
Probab=21.98 E-value=1.4e+02 Score=22.49 Aligned_cols=24 Identities=25% Similarity=0.412 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhcchH
Q 020863 140 AVAGTNAVGTIVGIYLIDHFGRKK 163 (320)
Q Consensus 140 ~~~~~~~~~~l~~g~l~Dr~grR~ 163 (320)
...+...++..+++.+.|++|+|.
T Consensus 142 tta~gEfvsl~vg~~~m~kl~kr~ 165 (169)
T COG4708 142 TTALGEFVSLYVGALIMDKLGKRI 165 (169)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhhh
Confidence 344456777888999999999985
No 310
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=20.79 E-value=3e+02 Score=19.16 Aligned_cols=26 Identities=19% Similarity=0.204 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhcchHHH
Q 020863 140 AVAGTNAVGTIVGIYLIDHFGRKKLA 165 (320)
Q Consensus 140 ~~~~~~~~~~l~~g~l~Dr~grR~~~ 165 (320)
.......++..+.+++.|..|.|...
T Consensus 95 ~~~~g~~~~~~~~~~~~~~~~~~~~~ 120 (141)
T TIGR00880 95 GIALGPLLGPPLGGVLAQFLGWRAPF 120 (141)
T ss_pred hHHHHHHHhHHhHHHHhcccchHHHH
Confidence 33444566677777777777766543
No 311
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=20.70 E-value=2e+02 Score=16.99 Aligned_cols=17 Identities=29% Similarity=0.587 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHhhhcc
Q 020863 145 NAVGTIVGIYLIDHFGR 161 (320)
Q Consensus 145 ~~~~~l~~g~l~Dr~gr 161 (320)
+++|+++++++.+.+|-
T Consensus 4 GiiGa~vGg~l~~~lg~ 20 (48)
T PF04226_consen 4 GIIGAFVGGWLFGLLGI 20 (48)
T ss_pred ehHHHHHHHHHHHHhcc
Confidence 56788888888888776
No 312
>PF12732 YtxH: YtxH-like protein; InterPro: IPR024623 This family of uncharacterised proteins is found in bacteria. Proteins in this family are typically between 100 and 143 amino acids in length. The N-terminal region is the most conserved.
Probab=20.27 E-value=1.5e+02 Score=19.20 Aligned_cols=26 Identities=15% Similarity=0.129 Sum_probs=15.5
Q ss_pred HHHHHHHHhhcccCCCCCHHHHHHHH
Q 020863 274 VLAVVFVILFVPETQGLTFLEVEQMW 299 (320)
Q Consensus 274 ~~~~~~~~~~~pet~g~~~~~~~~~~ 299 (320)
+++++..+++-|++..+..+++.+..
T Consensus 10 ~~Ga~~glL~aP~sG~e~R~~l~~~~ 35 (74)
T PF12732_consen 10 AAGAAAGLLFAPKSGKETREKLKDKA 35 (74)
T ss_pred HHHHHHHHHhCCCCcHHHHHHHHHHH
Confidence 44555567888987655555555443
Done!