Query 020867
Match_columns 320
No_of_seqs 120 out of 248
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 09:21:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020867.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020867hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t90_A Glucose-6-phosphate ace 58.1 25 0.00085 26.2 6.2 64 85-148 5-72 (149)
2 3i3g_A N-acetyltransferase; ma 54.8 52 0.0018 25.0 7.7 63 84-148 20-85 (161)
3 2l9b_B MRNA 3'-END-processing 52.5 8.8 0.0003 27.4 2.5 26 103-128 21-46 (53)
4 1jvr_A HTLV-II MA, MA, human T 44.3 16 0.00054 30.4 3.1 33 90-122 39-75 (137)
5 2vez_A Putative glucosamine 6- 30.9 1.6E+02 0.0056 23.2 7.4 63 85-148 48-114 (190)
6 1cjw_A Protein (serotonin N-ac 24.0 1.2E+02 0.0042 22.5 5.1 61 85-149 6-70 (166)
7 3eo4_A Uncharacterized protein 23.8 2.4E+02 0.0081 21.3 7.6 65 84-148 13-85 (164)
8 4fd4_A Arylalkylamine N-acetyl 23.8 1.1E+02 0.0037 24.4 5.0 65 85-149 7-81 (217)
9 4ag7_A Glucosamine-6-phosphate 22.8 1.9E+02 0.0065 21.6 6.1 63 85-147 22-88 (165)
10 1pfj_A TFIIH basal transcripti 22.5 65 0.0022 26.0 3.3 27 81-107 73-101 (108)
11 2fe7_A Probable N-acetyltransf 20.7 1.8E+02 0.0062 21.6 5.5 63 84-148 10-78 (166)
12 1s6c_B Potassium voltage-gated 20.6 32 0.0011 21.8 0.9 10 18-27 7-16 (30)
13 4e0a_A BH1408 protein; structu 20.6 1.8E+02 0.006 21.5 5.4 60 87-149 3-75 (164)
No 1
>3t90_A Glucose-6-phosphate acetyltransferase 1; GNAT fold, glcnac biosynthesis, alpha/beta protein; HET: EPE; 1.50A {Arabidopsis thaliana}
Probab=58.13 E-value=25 Score=26.25 Aligned_cols=64 Identities=14% Similarity=0.019 Sum_probs=42.5
Q ss_pred EeecCCCCCCHH-HHHHHHHHhhcccCCChhhHHH---HHHcCCCcceEEEecCCCCCCceEEEEeee
Q 020867 85 FVFFDPKPDDFH-GVKILLQTYLDDAQWDLSGFVD---LILAQTTVGTVVKIEGDDDNTPFSIVTALN 148 (320)
Q Consensus 85 FeffdP~e~Dfh-gIK~LL~qlf~~~~~dls~LaD---lIl~Q~~vGTvVK~~~ded~dvyg~~SvLN 148 (320)
+.+....+.|.. .|..|+.+++....++..++.. .+........++-..+.+++.+.|++.+..
T Consensus 5 ~~ir~~~~~D~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~ 72 (149)
T 3t90_A 5 FKIRKLEISDKRKGFIELLGQLTVTGSVTDEEFDRRFEEIRSYGDDHVICVIEEETSGKIAATGSVMI 72 (149)
T ss_dssp EEEEECCGGGGGTTHHHHHTTTSCCCCCCHHHHHHHHHHHHTTGGGEEEEEEEETTTTEEEEEEEEEE
T ss_pred EEEEecCchhhHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhCCCCcEEEEEEcCCCCcEEEEEEEEe
Confidence 455667788999 9999999887776788777777 455555333333333211356888887754
No 2
>3i3g_A N-acetyltransferase; malaria, structural genomics, structural genomics consortium, SGC,; 1.86A {Trypanosoma brucei} PDB: 3fb3_A
Probab=54.82 E-value=52 Score=25.01 Aligned_cols=63 Identities=10% Similarity=0.001 Sum_probs=41.2
Q ss_pred EEeecCCCCCCHHHHHHHHHHhhcccCCChhhHHHH---HHcCCCcceEEEecCCCCCCceEEEEeee
Q 020867 84 DFVFFDPKPDDFHGVKILLQTYLDDAQWDLSGFVDL---ILAQTTVGTVVKIEGDDDNTPFSIVTALN 148 (320)
Q Consensus 84 DFeffdP~e~DfhgIK~LL~qlf~~~~~dls~LaDl---Il~Q~~vGTvVK~~~ded~dvyg~~SvLN 148 (320)
++.+....++|+..|..|++.++....++...+.+. +..+..-..++-.. +++.+.|++.+..
T Consensus 20 ~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~~~vG~~~~~~ 85 (161)
T 3i3g_A 20 DLELRVLEESDLSSHLELLGHLTEAPPLSGVELANIADMRRRAGIVTKVFCHQ--PTGRIVGSASLMI 85 (161)
T ss_dssp CEEEEECCGGGHHHHHHHHTTTSCCCCCCHHHHHHHHHHHHHTTCEEEEEEET--TTTEEEEEEEEEE
T ss_pred cEEEEECcHhhHHHHHHHHHHhccCCCCCHHHHHHHHHHHhhcCCceEEEEEE--cCCCeEEEEEEEe
Confidence 456677788999999999999887767776666663 33333223333332 2346888777653
No 3
>2l9b_B MRNA 3'-END-processing protein RNA14; 3' END mRNA maturation, transcription; NMR {Saccharomyces cerevisiae}
Probab=52.51 E-value=8.8 Score=27.43 Aligned_cols=26 Identities=19% Similarity=0.376 Sum_probs=23.2
Q ss_pred HHhhcccCCChhhHHHHHHcCCCcce
Q 020867 103 QTYLDDAQWDLSGFVDLILAQTTVGT 128 (320)
Q Consensus 103 ~qlf~~~~~dls~LaDlIl~Q~~vGT 128 (320)
+|||....+|...|++.+.+|-++-+
T Consensus 21 RQYFK~~~ld~~klv~~L~dqV~ip~ 46 (53)
T 2l9b_B 21 RQYFNTNLLDAQKLVNFLNDQVEIPT 46 (53)
T ss_dssp GGGGCSSCCCHHHHHHHHHHTCCCC-
T ss_pred HhhhcccccCHHHHHHHHHhccccCC
Confidence 69999999999999999999988654
No 4
>1jvr_A HTLV-II MA, MA, human T-cell leukemia virus type II matrix protein; HTLV-II matrix protein, retroviral matrix protein; NMR {Human t-lymphotropic virus 2} SCOP: a.61.1.2
Probab=44.35 E-value=16 Score=30.41 Aligned_cols=33 Identities=27% Similarity=0.336 Sum_probs=25.3
Q ss_pred CCCCCHHHHHHHHHHhhcc----cCCChhhHHHHHHc
Q 020867 90 PKPDDFHGVKILLQTYLDD----AQWDLSGFVDLILA 122 (320)
Q Consensus 90 P~e~DfhgIK~LL~qlf~~----~~~dls~LaDlIl~ 122 (320)
|++-|||-++++|.--+.. +.||.|=||.+|=+
T Consensus 39 PS~fDFhqLr~fLklAl~TPvWlnPI~YSlLA~LiPk 75 (137)
T 1jvr_A 39 PSDFDFQQLRRFLKLALKTPIWLNPIDYSLLASLIPK 75 (137)
T ss_dssp CSTTTHHHHHHHHHHHHTCTTSTTTTCTTTHHHHSCS
T ss_pred CCcccHHHHHHHHHHHhcCcccccchhHHHHHhhccC
Confidence 5566999999999865543 67888888888654
No 5
>2vez_A Putative glucosamine 6-phosphate acetyltransferase; acyltransferase; HET: ACO G6P; 1.45A {Aspergillus fumigatus} PDB: 2vxk_A*
Probab=30.92 E-value=1.6e+02 Score=23.17 Aligned_cols=63 Identities=5% Similarity=-0.030 Sum_probs=39.2
Q ss_pred EeecCCCCCCHHH-HHHHHHHhhcccCCChhhHHHHH---HcCCCcceEEEecCCCCCCceEEEEeee
Q 020867 85 FVFFDPKPDDFHG-VKILLQTYLDDAQWDLSGFVDLI---LAQTTVGTVVKIEGDDDNTPFSIVTALN 148 (320)
Q Consensus 85 FeffdP~e~Dfhg-IK~LL~qlf~~~~~dls~LaDlI---l~Q~~vGTvVK~~~ded~dvyg~~SvLN 148 (320)
+.+....+.|+.. |..|+++.+....++...+.+.+ .....-+.++-+.+ +++.+.|++.+..
T Consensus 48 ~~iR~~~~~D~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~g~ivG~~~~~~ 114 (190)
T 2vez_A 48 YTIRPLCRSDYKRGYLDVLRVLTTVGDINEEQWNSRYEWIRARSDEYYLLVVCD-GEGRIVGTGSLVV 114 (190)
T ss_dssp CEEEECCGGGGGGTHHHHHTTTSCCCCCCHHHHHHHHHHHHTTTTTEEEEEEEC-TTSCEEEEEEEEE
T ss_pred eEEEeCCHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHhCCCCcEEEEEEc-CCCcEEEEEEEEe
Confidence 3455667789999 99999887765566666665543 33333334443332 3356889888654
No 6
>1cjw_A Protein (serotonin N-acetyltransferase); HET: COT; 1.80A {Ovis aries} SCOP: d.108.1.1 PDB: 1b6b_A
Probab=23.97 E-value=1.2e+02 Score=22.46 Aligned_cols=61 Identities=10% Similarity=0.018 Sum_probs=40.9
Q ss_pred EeecCCCCCCHHHHHHHHHHhhcc----cCCChhhHHHHHHcCCCcceEEEecCCCCCCceEEEEeeec
Q 020867 85 FVFFDPKPDDFHGVKILLQTYLDD----AQWDLSGFVDLILAQTTVGTVVKIEGDDDNTPFSIVTALNL 149 (320)
Q Consensus 85 FeffdP~e~DfhgIK~LL~qlf~~----~~~dls~LaDlIl~Q~~vGTvVK~~~ded~dvyg~~SvLNL 149 (320)
+.+....+.|+..|..|....+.. ..++...+.+.+..... ...|-.+ ++.+.|++.+...
T Consensus 6 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~---~~~ivG~~~~~~~ 70 (166)
T 1cjw_A 6 NEFRCLTPEDAAGVFEIEREAFISVSGNCPLNLDEVQHFLTLCPE-LSLGWFV---EGRLVAFIIGSLW 70 (166)
T ss_dssp SEEECCCGGGHHHHHHHHHHHTHHHHSCCSCCHHHHHHHHHHCGG-GEEEEEE---TTEEEEEEEEEEE
T ss_pred eeeecCCHHHHHHHHHHHHHhCCCCcccCccCHHHHHHHHhcCCC-cEEEEEE---CCeEEEEEEeeee
Confidence 345677788999999999877643 36777888888865433 3333322 2468888876644
No 7
>3eo4_A Uncharacterized protein MJ1062; APC60792.2,MJ_1062,methanocaldococcus jannaschii DSM 2661, S genomics, PSI-2; HET: MES PG6; 2.19A {Methanocaldococcus jannaschii}
Probab=23.77 E-value=2.4e+02 Score=21.30 Aligned_cols=65 Identities=3% Similarity=-0.025 Sum_probs=37.4
Q ss_pred EEeecCCCCCCHHHHHHHHH-----HhhcccCCC--hhhHHHHHHcCCCcceEEEec-CCCCCCceEEEEeee
Q 020867 84 DFVFFDPKPDDFHGVKILLQ-----TYLDDAQWD--LSGFVDLILAQTTVGTVVKIE-GDDDNTPFSIVTALN 148 (320)
Q Consensus 84 DFeffdP~e~DfhgIK~LL~-----qlf~~~~~d--ls~LaDlIl~Q~~vGTvVK~~-~ded~dvyg~~SvLN 148 (320)
.+.+..+.++|...|..++. .+......+ ...+.+.++.+..-+..+-+. +++++.+.|++++..
T Consensus 13 ~i~ir~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~~ 85 (164)
T 3eo4_A 13 KIIIRQITDNDLELLMAWRSNPLIYKFFYIQKEPLKWEEHYSWWMSRENRVDWIILLRENNTIRKVGSVNVSQ 85 (164)
T ss_dssp EEEEEECCGGGHHHHHHHHTCHHHHTTSTTCCSCCCHHHHHHHHHHCCSCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred cEEEEECCHHHHHHHHHHHcCHHHHHhccCCCCChhHHHHHHHHhcCCCCceEEEEEEecCCCcEEEEEEEEe
Confidence 35667788899999999883 233332333 336666655555432333222 013346888887754
No 8
>4fd4_A Arylalkylamine N-acetyltransferase like 5B; GNAT; 1.95A {Aedes aegypti}
Probab=23.76 E-value=1.1e+02 Score=24.38 Aligned_cols=65 Identities=17% Similarity=0.109 Sum_probs=38.5
Q ss_pred EeecCCCCCCHHHHHHHHHHhhcc-cC---------CChhhHHHHHHcCCCcceEEEecCCCCCCceEEEEeeec
Q 020867 85 FVFFDPKPDDFHGVKILLQTYLDD-AQ---------WDLSGFVDLILAQTTVGTVVKIEGDDDNTPFSIVTALNL 149 (320)
Q Consensus 85 FeffdP~e~DfhgIK~LL~qlf~~-~~---------~dls~LaDlIl~Q~~vGTvVK~~~ded~dvyg~~SvLNL 149 (320)
+.+....++|+..|..|+.+.|.. .. ....++...+.....-|.++-..+.+++.+.|++.+...
T Consensus 7 i~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~g~ivG~~~~~~~ 81 (217)
T 4fd4_A 7 IVLRVARLDELEQVREILHRIYYPEEGITISYVHGKSHTLDDERFSLSFVEQGTVVVAEDSAAKKFIGVSIAGPI 81 (217)
T ss_dssp EEEEECCGGGHHHHHHHHHHHTTTTCHHHHHBTTCSSCCHHHHHHHHTTTTTTCEEEEEETTTTEEEEEEEEEEE
T ss_pred eEEEEcCHHHHHHHHHHHHHhcCCccchhhhccCCCccHHHHHHHHHHHHHCCCeEEEEECCCCCEEEEEEeecc
Confidence 456677889999999999887532 11 112344444544433344443332234579999876554
No 9
>4ag7_A Glucosamine-6-phosphate N-acetyltransferase; HET: COA; 1.55A {Caenorhabditis elegans} PDB: 4ag9_A*
Probab=22.82 E-value=1.9e+02 Score=21.61 Aligned_cols=63 Identities=19% Similarity=0.190 Sum_probs=38.6
Q ss_pred EeecCCCCCCHH-HHHHHHHHhhcccCCChhhHHHHHH---cCCCcceEEEecCCCCCCceEEEEee
Q 020867 85 FVFFDPKPDDFH-GVKILLQTYLDDAQWDLSGFVDLIL---AQTTVGTVVKIEGDDDNTPFSIVTAL 147 (320)
Q Consensus 85 FeffdP~e~Dfh-gIK~LL~qlf~~~~~dls~LaDlIl---~Q~~vGTvVK~~~ded~dvyg~~SvL 147 (320)
+.+....+.|+. .+..|+.++.....++..++.+.+. .+..-..++-..+.+++.+.|++++.
T Consensus 22 ~~iR~~~~~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ivG~~~~~ 88 (165)
T 4ag7_A 22 FKVRPLAKDDFSKGYVDLLSQLTSVGNLDQEAFEKRFEAMRTSVPNYHIVVIEDSNSQKVVASASLV 88 (165)
T ss_dssp EEEEECBGGGGTTTHHHHHHHHSCCTTCCHHHHHHHHHHHHTCSSCCEEEEEEETTTTEEEEEEEEE
T ss_pred EEEeeCCHhHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhcCCCceEEEEEEeCCCCeEEEEEEEE
Confidence 455667788999 6999999887666667666665443 32122222223221245688888875
No 10
>1pfj_A TFIIH basal transcription factor complex P62 subunit; PH/PTB domain, structural proteomics in europe, spine, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.9 PDB: 2rnr_B
Probab=22.53 E-value=65 Score=26.04 Aligned_cols=27 Identities=30% Similarity=0.356 Sum_probs=22.9
Q ss_pred EEEEEeecCCCC--CCHHHHHHHHHHhhc
Q 020867 81 VQADFVFFDPKP--DDFHGVKILLQTYLD 107 (320)
Q Consensus 81 V~VDFeffdP~e--~DfhgIK~LL~qlf~ 107 (320)
-+.-|-|.+|.+ .|.+.||.+|++++.
T Consensus 73 ~~~~F~Ftn~~~a~~erd~VKd~L~~~l~ 101 (108)
T 1pfj_A 73 DTTNFHFSNESTAVKERDAVKDLLQQLLP 101 (108)
T ss_dssp CEEEEECCCSSCTTHHHHHHHHHHHHHHH
T ss_pred CceEEEEcCcHHHHHHHHHHHHHHHHHHH
Confidence 357999999975 399999999999874
No 11
>2fe7_A Probable N-acetyltransferase; structural genomics, pseudomonas aerugi PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa ucbpp-pa14} SCOP: d.108.1.1
Probab=20.73 E-value=1.8e+02 Score=21.60 Aligned_cols=63 Identities=11% Similarity=0.171 Sum_probs=40.1
Q ss_pred EEeecCCCCCCHHHHHHHHHHhhc------ccCCChhhHHHHHHcCCCcceEEEecCCCCCCceEEEEeee
Q 020867 84 DFVFFDPKPDDFHGVKILLQTYLD------DAQWDLSGFVDLILAQTTVGTVVKIEGDDDNTPFSIVTALN 148 (320)
Q Consensus 84 DFeffdP~e~DfhgIK~LL~qlf~------~~~~dls~LaDlIl~Q~~vGTvVK~~~ded~dvyg~~SvLN 148 (320)
++.+....+.|+..|..|+..... ...++...+...+..+..-+.++-... ++.+.|++.+..
T Consensus 10 ~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~vG~~~~~~ 78 (166)
T 2fe7_A 10 TLEIRPAVPADAEQILAFIIELADYERARHEVVTDVEGIRRSLFAEGSPTRALMCLS--EGRPIGYAVFFY 78 (166)
T ss_dssp -CEEEECCGGGHHHHHHHHHHHHHHTTCGGGCCCCHHHHHHHHTSTTCSEEEEEEEE--TTEEEEEEEEEE
T ss_pred ceEEEECCHHHHHHHHHHHHHHHHhhcccccCCccHHHHHHHhhcCCCCceEEEEEe--CCeEEEEEEEEe
Confidence 356677788999999999987431 234667778887755544333333332 346888887654
No 12
>1s6c_B Potassium voltage-gated channel subfamily D membe; EF-hand, transport protein; 2.00A {Rattus norvegicus}
Probab=20.58 E-value=32 Score=21.85 Aligned_cols=10 Identities=50% Similarity=0.913 Sum_probs=8.8
Q ss_pred ccchhHHHHH
Q 020867 18 TFSPFARSVA 27 (320)
Q Consensus 18 ~~~~~~~~~~ 27 (320)
+||||+|..+
T Consensus 7 ~w~~far~a~ 16 (30)
T 1s6c_B 7 AWLPFARAAA 16 (30)
T ss_dssp TTHHHHHHHH
T ss_pred hhcccchhhc
Confidence 6899999987
No 13
>4e0a_A BH1408 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG, transferase; 1.80A {Bacillus halodurans} PDB: 4f6a_A*
Probab=20.55 E-value=1.8e+02 Score=21.54 Aligned_cols=60 Identities=12% Similarity=0.057 Sum_probs=36.7
Q ss_pred ecCCCCCCHHHHHHHHHHhhc-------------ccCCChhhHHHHHHcCCCcceEEEecCCCCCCceEEEEeeec
Q 020867 87 FFDPKPDDFHGVKILLQTYLD-------------DAQWDLSGFVDLILAQTTVGTVVKIEGDDDNTPFSIVTALNL 149 (320)
Q Consensus 87 ffdP~e~DfhgIK~LL~qlf~-------------~~~~dls~LaDlIl~Q~~vGTvVK~~~ded~dvyg~~SvLNL 149 (320)
+....++|...|..|+...+. ...+....+...+.......-|+..+ ++.+.|++.+...
T Consensus 3 ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~---~g~~vG~~~~~~~ 75 (164)
T 4e0a_A 3 IREATVQDYEEVARLHTQVHEAHVKERGDIFRSNEPTLNPSRFQAAVQGEKSTVLVFVDE---REKIGAYSVIHLV 75 (164)
T ss_dssp EEECCGGGHHHHHHHHHHHHHHHHHHCTTTBCCCSSSSCHHHHHHHHHCSSEEEEEEEEE---TTEEEEEEEEEEE
T ss_pred EEEcCccCHHHHHHHHHHHHHHHhccCCccccccchHHHHHHHHHHhcCCceEEEEEECC---CCcEEEEEEEEec
Confidence 445677899999999987652 23455666777766543322233222 1258888877544
Done!