Query 020867
Match_columns 320
No_of_seqs 120 out of 248
Neff 5.0
Searched_HMMs 13730
Date Mon Mar 25 09:22:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020867.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/020867hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1jvra_ a.61.1.2 (A:) HTLV-II 58.8 3.1 0.00023 32.9 3.1 33 90-122 39-75 (137)
2 d1yr0a1 d.108.1.1 (A:4-166) Ph 26.7 42 0.0031 24.5 5.0 60 88-150 5-73 (163)
3 d1yvoa1 d.108.1.1 (A:4-172) Hy 26.7 23 0.0017 26.4 3.5 61 88-150 3-72 (169)
4 d1vhsa_ d.108.1.1 (A:) Putativ 24.8 1.2E+02 0.0086 22.0 9.6 63 86-149 3-72 (165)
5 d1s3za_ d.108.1.1 (A:) Aminogl 21.1 41 0.003 24.0 3.8 58 86-147 4-63 (147)
6 d2ozga2 d.108.1.10 (A:8-290) P 17.6 1.5E+02 0.011 23.8 7.3 34 85-118 2-35 (283)
7 d2rnrb1 b.55.1.9 (B:1-108) TFI 15.4 34 0.0025 25.6 2.0 26 83-108 75-102 (108)
8 d1qsma_ d.108.1.1 (A:) Histone 14.7 1.6E+02 0.012 20.6 5.9 59 87-146 5-69 (150)
9 d1i12a_ d.108.1.1 (A:) Glucosa 13.5 2E+02 0.015 20.0 7.5 27 85-111 5-31 (157)
10 d1mk4a_ d.108.1.1 (A:) Hypothe 13.3 87 0.0063 22.8 4.0 22 88-109 5-26 (157)
No 1
>d1jvra_ a.61.1.2 (A:) HTLV-II matrix protein {Human T-cell leukemia virus type 2 [TaxId: 11909]}
Probab=58.77 E-value=3.1 Score=32.93 Aligned_cols=33 Identities=27% Similarity=0.336 Sum_probs=26.1
Q ss_pred CCCCCHHHHHHHHHHhhcc----cCCChhhHHHHHHc
Q 020867 90 PKPDDFHGVKILLQTYLDD----AQWDLSGFVDLILA 122 (320)
Q Consensus 90 P~e~DfhgIK~LL~qlf~~----~~~dls~LaDlIl~ 122 (320)
|++-|||-+|++|.-.+.. +.||.|-||.+|=.
T Consensus 39 PS~~DF~qLr~flklalkTpvwl~Pi~ySlla~liPk 75 (137)
T d1jvra_ 39 PSDFDFQQLRRFLKLALKTPIWLNPIDYSLLASLIPK 75 (137)
T ss_dssp CSTTTHHHHHHHHHHHHTCTTSTTTTCTTTHHHHSCS
T ss_pred CCcccHHHHHHHHHHHHhCcccccccccchhhccCCC
Confidence 5667999999999876643 68999998887643
No 2
>d1yr0a1 d.108.1.1 (A:4-166) Phosphinothricin acetyltransferase {Agrobacterium tumefaciens [TaxId: 358]}
Probab=26.72 E-value=42 Score=24.52 Aligned_cols=60 Identities=22% Similarity=0.239 Sum_probs=37.0
Q ss_pred cCCCCCCHHHHHHHHHHhh-------cccCCChhhHHHHHHcCCCc--ceEEEecCCCCCCceEEEEeeecc
Q 020867 88 FDPKPDDFHGVKILLQTYL-------DDAQWDLSGFVDLILAQTTV--GTVVKIEGDDDNTPFSIVTALNLR 150 (320)
Q Consensus 88 fdP~e~DfhgIK~LL~qlf-------~~~~~dls~LaDlIl~Q~~v--GTvVK~~~ded~dvyg~~SvLNL~ 150 (320)
....++|..+|..++.++. +....+..+..+.+.....- ..+|-.. ++.+.|++++....
T Consensus 5 R~a~~~D~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~---~~~ivG~~~~~~~~ 73 (163)
T d1yr0a1 5 RDATVDDLSGIMEIYNDAVVNTTAIWNEVVVDLENRKDWFAARTSRGFPVIVAIL---DGKVAGYASYGDWR 73 (163)
T ss_dssp EECCGGGHHHHHHHHHHHHHHCSSSSSCCCCCHHHHHHHHHHHHHHTCCEEEEEE---TTEEEEEEEEEESS
T ss_pred EeCCHHHHHHHHHHHHHHHhhcccccccCCCCHHHHHHHHHhhccCCCcEEEEEE---CCeEEEeecceeec
Confidence 4556789999999987753 23456666766666554322 2333322 34688988776654
No 3
>d1yvoa1 d.108.1.1 (A:4-172) Hypothetical protein PA4866 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=26.72 E-value=23 Score=26.40 Aligned_cols=61 Identities=13% Similarity=0.176 Sum_probs=38.1
Q ss_pred cCCCCCCHHHHHHHHHHhh-------cccCCChhhHHHHHHcCCCcc--eEEEecCCCCCCceEEEEeeecc
Q 020867 88 FDPKPDDFHGVKILLQTYL-------DDAQWDLSGFVDLILAQTTVG--TVVKIEGDDDNTPFSIVTALNLR 150 (320)
Q Consensus 88 fdP~e~DfhgIK~LL~qlf-------~~~~~dls~LaDlIl~Q~~vG--TvVK~~~ded~dvyg~~SvLNL~ 150 (320)
+...+.|..+|..+++++. +....+..+....+..+..-+ -+|-.+ .++.+.|++++-...
T Consensus 3 R~a~~~D~~~i~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~vG~~~~~~~~ 72 (169)
T d1yvoa1 3 RDAGVADLPGILAIYNDAVGNTTAIWNETPVDLANRQAWFDTRARQGYPILVASD--AAGEVLGYASYGDWR 72 (169)
T ss_dssp EECCGGGHHHHHHHHHHHHHHCSSSSCCSCCCHHHHHHHHHHHHHHTCCEEEEEC--TTCCEEEEEEEEESS
T ss_pred ccCcHHHHHHHHHHHHHHHhhcceecccCCCCHHHHHHHHHhhhccCCceEEEEe--cCCCEEEeecccccc
Confidence 3456789999999988754 234556777777665543323 333333 345689998765443
No 4
>d1vhsa_ d.108.1.1 (A:) Putative phosphinothricin acetyltransferase YwnH {Bacillus subtilis [TaxId: 1423]}
Probab=24.79 E-value=1.2e+02 Score=21.96 Aligned_cols=63 Identities=6% Similarity=0.058 Sum_probs=42.2
Q ss_pred eecCCCCCCHHHHHHHHHHhhc-------ccCCChhhHHHHHHcCCCcceEEEecCCCCCCceEEEEeeec
Q 020867 86 VFFDPKPDDFHGVKILLQTYLD-------DAQWDLSGFVDLILAQTTVGTVVKIEGDDDNTPFSIVTALNL 149 (320)
Q Consensus 86 effdP~e~DfhgIK~LL~qlf~-------~~~~dls~LaDlIl~Q~~vGTvVK~~~ded~dvyg~~SvLNL 149 (320)
.+....++|...|..|..++.. ....+..++.+.+.....-+...-+.. +++.+.|++++-+.
T Consensus 3 ~iR~a~~~D~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~ivG~~~~~~~ 72 (165)
T d1vhsa_ 3 TLRLAEHRDLEAVVAIYNSTIASRMVTADTEPVTPEDRMEWFSGHTESRPLYVAED-ENGNVAAWISFETF 72 (165)
T ss_dssp EEEECCGGGHHHHHHHHHHHHTTTSSCSCSSCCCGGGGHHHHHTCCSSSCEEEEEC-TTSCEEEEEEEEES
T ss_pred EEEeCCHHHHHHHHHHHHHHHhhcccccccCCCCHHHHHHHHHhccccCCeEEEEe-cCCceEeeeeeeec
Confidence 3455677899999999877542 235667778888877666555554442 44578888876543
No 5
>d1s3za_ d.108.1.1 (A:) Aminoglycoside N-acetyltransferase AAC(6')-IY {Salmonella enteritidis [TaxId: 149539]}
Probab=21.12 E-value=41 Score=23.98 Aligned_cols=58 Identities=7% Similarity=0.060 Sum_probs=36.5
Q ss_pred eecCCCCCCHHHHHHHHHHhhccc--CCChhhHHHHHHcCCCcceEEEecCCCCCCceEEEEee
Q 020867 86 VFFDPKPDDFHGVKILLQTYLDDA--QWDLSGFVDLILAQTTVGTVVKIEGDDDNTPFSIVTAL 147 (320)
Q Consensus 86 effdP~e~DfhgIK~LL~qlf~~~--~~dls~LaDlIl~Q~~vGTvVK~~~ded~dvyg~~SvL 147 (320)
+....++.|...+..|.++++... ......+.+.+... ....+|..++ +.+.|++++-
T Consensus 4 ~Ir~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~va~~~---~~~vG~~~~~ 63 (147)
T d1s3za_ 4 DIRQMNKTHLEHWRGLRKQLWPGHPDDAHLADGEEILQAD-HLASFIAMAD---GVAIGFADAS 63 (147)
T ss_dssp EEEECCGGGHHHHHHHHHHHSTTSCHHHHHHHHHHHHHCS-SEEEEEEEET---TEEEEEEEEE
T ss_pred EEEECCHHHHHHHHHHHHHHCCCCCcHHHHHHHHHHhhCC-CcEEEEEEEC---CEEEEEEEEE
Confidence 446678889999999999988543 23445566655543 3344444432 3577777653
No 6
>d2ozga2 d.108.1.10 (A:8-290) Putative acetyltransferase Ava4977 {Anabaena variabilis [TaxId: 1172]}
Probab=17.64 E-value=1.5e+02 Score=23.77 Aligned_cols=34 Identities=12% Similarity=0.186 Sum_probs=25.5
Q ss_pred EeecCCCCCCHHHHHHHHHHhhcccCCChhhHHH
Q 020867 85 FVFFDPKPDDFHGVKILLQTYLDDAQWDLSGFVD 118 (320)
Q Consensus 85 FeffdP~e~DfhgIK~LL~qlf~~~~~dls~LaD 118 (320)
|.+...+++|+..|..|+.+.|.....+..-.-+
T Consensus 2 ~~~~ka~~~d~~~l~~l~~~~F~~~~~~~~~~~~ 35 (283)
T d2ozga2 2 FKYTKASQENIQQLGNILEQCFVMSFGDSEIYVK 35 (283)
T ss_dssp EEEEECCTTTHHHHHHHHHHHTTCCTTHHHHHHH
T ss_pred eEEEECCHHHHHHHHHHHHHHcCCCcCcHHHHHH
Confidence 6777889999999999999999665444333333
No 7
>d2rnrb1 b.55.1.9 (B:1-108) TFIIH basal transcription factor complex p62 subunit (BTF2-p62), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.38 E-value=34 Score=25.65 Aligned_cols=26 Identities=31% Similarity=0.402 Sum_probs=21.6
Q ss_pred EEEeecCCCCC--CHHHHHHHHHHhhcc
Q 020867 83 ADFVFFDPKPD--DFHGVKILLQTYLDD 108 (320)
Q Consensus 83 VDFeffdP~e~--DfhgIK~LL~qlf~~ 108 (320)
.-|.|-++..- |.+.||.+|+|++..
T Consensus 75 ~~F~Ftn~~~~~~~Rd~iK~~Lq~~i~~ 102 (108)
T d2rnrb1 75 TNFHFSNESTAVKERDAVKDLLQQLLPK 102 (108)
T ss_dssp EEEEECCTTTHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECChHHHHHHHHHHHHHHHHHHHH
Confidence 78999887653 889999999998843
No 8
>d1qsma_ d.108.1.1 (A:) Histone acetyltransferase HPA2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=14.73 E-value=1.6e+02 Score=20.59 Aligned_cols=59 Identities=14% Similarity=0.099 Sum_probs=32.3
Q ss_pred ecCCCCCCHHHHHHHHHHhhc--ccCCCh---hhHHHHHHcCCCcceE-EEecCCCCCCceEEEEe
Q 020867 87 FFDPKPDDFHGVKILLQTYLD--DAQWDL---SGFVDLILAQTTVGTV-VKIEGDDDNTPFSIVTA 146 (320)
Q Consensus 87 ffdP~e~DfhgIK~LL~qlf~--~~~~dl---s~LaDlIl~Q~~vGTv-VK~~~ded~dvyg~~Sv 146 (320)
.....++|++.+..|.+.|.. .....- ..+..-+.++..-+.. +-++ ++++.+.|+..+
T Consensus 5 IR~~~~~D~e~~~~L~~~y~~fy~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ivg~~~~ 69 (150)
T d1qsma_ 5 VRFVTENDKEGWQRLWKSYQDFYEVSFPDDLDDFNFGRFLDPNIKMWAAVAVE-SSSEKIIGMINF 69 (150)
T ss_dssp EEECCGGGHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHCTTSCEEEEEEEE-SSSCCEEEEEEE
T ss_pred EEECCHHHHHHHHHHHHHHHHHhcccCchHHHHHHHHHHhCCCcccceeeeeh-hhcCcEEEEEEE
Confidence 345677899999999887653 223332 2233334554443322 3233 244567777665
No 9
>d1i12a_ d.108.1.1 (A:) Glucosamine-phosphate N-acetyltransferase GNA1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=13.54 E-value=2e+02 Score=19.99 Aligned_cols=27 Identities=15% Similarity=0.093 Sum_probs=20.0
Q ss_pred EeecCCCCCCHHHHHHHHHHhhcccCC
Q 020867 85 FVFFDPKPDDFHGVKILLQTYLDDAQW 111 (320)
Q Consensus 85 FeffdP~e~DfhgIK~LL~qlf~~~~~ 111 (320)
|......++|+..|..+++.+.....+
T Consensus 5 ~~IR~~~~~D~~~i~~~~~~~~~~~~~ 31 (157)
T d1i12a_ 5 FYIRRMEEGDLEQVTETLKVLTTVGTI 31 (157)
T ss_dssp EEEEECCGGGHHHHHHHHTTTSCCCCC
T ss_pred cEEEeCCHHHHHHHHHHHHHHhhcccc
Confidence 566777889999999999776543333
No 10
>d1mk4a_ d.108.1.1 (A:) Hypothetical protein YqiY {Bacillus subtilis [TaxId: 1423]}
Probab=13.28 E-value=87 Score=22.76 Aligned_cols=22 Identities=14% Similarity=0.199 Sum_probs=17.7
Q ss_pred cCCCCCCHHHHHHHHHHhhccc
Q 020867 88 FDPKPDDFHGVKILLQTYLDDA 109 (320)
Q Consensus 88 fdP~e~DfhgIK~LL~qlf~~~ 109 (320)
....++|++.|-.|+++++...
T Consensus 5 R~~~~~D~~~i~~l~~~~~~~~ 26 (157)
T d1mk4a_ 5 RTITSSDYEMVTSVLNEWWGGR 26 (157)
T ss_dssp EECCGGGHHHHHHHTTTSSTTC
T ss_pred EeCCHHHHHHHHHHHHHHhcCC
Confidence 4567789999999999988553
Done!