Query 020868
Match_columns 320
No_of_seqs 184 out of 576
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 05:47:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020868.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020868hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF04188 Mannosyl_trans2: Mann 100.0 4.6E-65 1E-69 505.9 27.0 295 10-307 2-296 (443)
2 KOG2647 Predicted Dolichyl-pho 100.0 1.3E-60 2.8E-65 456.5 20.2 302 4-308 7-311 (444)
3 COG5542 Predicted integral mem 99.9 2.8E-26 6.2E-31 220.7 18.2 219 69-310 71-297 (420)
4 PF13231 PMT_2: Dolichyl-phosp 99.0 3.3E-08 7.1E-13 83.5 18.9 117 94-222 3-127 (159)
5 TIGR03766 conserved hypothetic 98.8 9.9E-07 2.1E-11 89.3 22.3 145 70-225 90-251 (483)
6 PF02366 PMT: Dolichyl-phospha 98.6 8.1E-06 1.8E-10 75.0 19.4 96 123-218 82-190 (245)
7 TIGR03663 conserved hypothetic 98.2 0.00026 5.7E-09 71.0 21.6 135 70-218 24-171 (439)
8 COG1807 ArnT 4-amino-4-deoxy-L 98.0 0.00056 1.2E-08 69.9 20.1 153 93-263 64-225 (535)
9 PRK13279 arnT 4-amino-4-deoxy- 97.8 0.0053 1.2E-07 63.4 21.6 107 94-211 63-181 (552)
10 PF09594 DUF2029: Protein of u 97.5 0.0077 1.7E-07 54.2 16.1 66 157-222 57-122 (241)
11 PLN02841 GPI mannosyltransfera 97.4 0.0092 2E-07 59.7 17.4 177 7-223 6-183 (440)
12 PF09852 DUF2079: Predicted me 97.4 0.0074 1.6E-07 60.6 16.1 138 70-220 8-158 (449)
13 COG1287 Uncharacterized membra 96.9 0.075 1.6E-06 57.2 19.4 124 85-215 79-217 (773)
14 PF02516 STT3: Oligosaccharyl 96.9 0.029 6.3E-07 56.3 15.5 137 84-227 61-210 (483)
15 PF03901 Glyco_transf_22: Alg9 96.9 0.082 1.8E-06 52.4 18.1 102 123-225 81-195 (418)
16 PF06728 PIG-U: GPI transamida 96.9 0.11 2.3E-06 51.4 18.5 137 81-225 44-194 (382)
17 TIGR03459 crt_membr carotene b 96.6 0.14 3E-06 51.8 16.8 128 90-227 140-269 (470)
18 KOG3359 Dolichyl-phosphate-man 96.5 0.16 3.4E-06 53.6 17.2 199 70-271 59-281 (723)
19 PF10131 PTPS_related: 6-pyruv 96.4 0.42 9.1E-06 50.2 20.2 85 125-210 25-119 (616)
20 PF11028 DUF2723: Protein of u 96.4 0.33 7.1E-06 43.1 16.5 124 89-222 12-164 (178)
21 COG1928 PMT1 Dolichyl-phosphat 96.4 0.081 1.8E-06 55.6 14.4 190 70-264 48-262 (699)
22 PLN02816 mannosyltransferase 96.4 1.2 2.7E-05 46.1 22.8 96 126-222 121-226 (546)
23 PF04922 DIE2_ALG10: DIE2/ALG1 95.4 0.82 1.8E-05 45.2 16.2 71 153-223 91-162 (379)
24 KOG3893 Mannosyltransferase [C 95.2 0.064 1.4E-06 51.5 7.4 92 128-220 100-193 (405)
25 COG4346 Predicted membrane-bou 94.9 0.58 1.3E-05 45.5 13.0 84 132-215 163-247 (438)
26 COG5305 Predicted membrane pro 94.7 2.7 5.7E-05 43.6 17.9 81 90-182 94-177 (552)
27 COG3463 Predicted membrane pro 94.4 0.67 1.4E-05 46.3 12.2 95 124-218 88-184 (458)
28 PF03155 Alg6_Alg8: ALG6, ALG8 93.1 2.6 5.6E-05 42.9 14.2 106 151-261 131-243 (469)
29 PF05208 ALG3: ALG3 protein; 90.5 2.7 5.8E-05 41.4 10.6 107 157-271 108-216 (368)
30 KOG2762 Mannosyltransferase [C 89.4 1.8 4E-05 42.3 8.3 109 153-269 132-242 (429)
31 PF05007 Mannosyl_trans: Manno 88.8 2.3 5E-05 39.9 8.4 50 174-223 5-54 (259)
32 KOG2576 Glucosyltransferase - 86.7 4.9 0.00011 40.0 9.5 101 125-226 103-206 (500)
33 COG5650 Predicted integral mem 82.0 2.4 5.2E-05 43.5 5.2 106 157-272 199-304 (536)
34 PF09586 YfhO: Bacterial membr 81.5 83 0.0018 34.0 18.3 85 124-208 90-180 (843)
35 PF14897 EpsG: EpsG family 81.1 47 0.001 30.9 15.4 130 73-219 24-157 (330)
36 PHA02898 virion envelope prote 76.6 9.1 0.0002 30.0 5.8 66 209-276 9-77 (92)
37 KOG2642 Alpha-1,2 glucosyltran 73.9 38 0.00083 33.4 10.5 67 160-226 119-186 (446)
38 COG5617 Predicted integral mem 72.5 1.5E+02 0.0032 32.2 19.8 131 70-221 54-197 (801)
39 PHA03048 IMV membrane protein; 69.8 20 0.00044 28.2 6.2 64 209-274 9-74 (93)
40 PRK13375 pimE mannosyltransfer 63.2 1.7E+02 0.0037 29.4 14.3 29 191-219 167-195 (409)
41 PF09913 DUF2142: Predicted me 53.5 2.2E+02 0.0048 27.6 18.9 90 122-218 120-219 (389)
42 KOG2575 Glucosyltransferase - 44.8 3.5E+02 0.0076 27.5 12.8 101 123-226 138-243 (510)
43 KOG2552 Major facilitator supe 36.6 4.4E+02 0.0096 26.2 12.2 69 154-222 145-214 (388)
44 KOG2927 Membrane component of 30.0 54 0.0012 32.2 3.3 14 92-105 205-218 (372)
45 KOG2515 Mannosyltransferase [C 25.0 7.9E+02 0.017 25.5 12.7 84 141-225 113-198 (568)
46 COG2211 MelB Na+/melibiose sym 23.6 8.1E+02 0.017 25.1 11.1 97 126-225 277-394 (467)
47 KOG2292 Oligosaccharyltransfer 23.0 2.5E+02 0.0055 29.5 6.7 63 132-195 125-190 (751)
48 PF05767 Pox_A14: Poxvirus vir 20.9 3.5E+02 0.0076 21.4 5.7 25 247-273 50-74 (92)
49 PF00040 fn2: Fibronectin type 20.0 63 0.0014 21.6 1.2 26 271-300 15-40 (42)
No 1
>PF04188 Mannosyl_trans2: Mannosyltransferase (PIG-V)); InterPro: IPR007315 This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface. Proteins in this family are involved in transferring the second mannose in the biosynthetic pathway of GPI [], [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=100.00 E-value=4.6e-65 Score=505.88 Aligned_cols=295 Identities=41% Similarity=0.697 Sum_probs=252.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhccccccHHHHHHHhhcCCCccc
Q 020868 10 TQVFKSAAVSRLLLLALIVLWRALLSPYDTSAPLNPNCLVDPHQQQHSPNSSIGSRIESSIVWDSVYFVRIAQCGYEYEQ 89 (320)
Q Consensus 10 ~~vl~~~l~sR~~~~~i~~l~~~~~p~~dts~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~WDa~~f~~IA~~GY~~e~ 89 (320)
++|++.++.+|+++++++++++...-|+|++..+.++..+++. ...+....+.++++.|||++||++||+|||++||
T Consensus 2 ~~~~~~~~~~r~l~lll~~l~~~~~~~~~t~~~l~~~~~~~~~---~~~~~~~~~~l~~l~rWDa~~F~~IA~~GY~~E~ 78 (443)
T PF04188_consen 2 KGVVKFFVLSRILQLLLQILFPGLLFDTSTSLLLDPPCSSAPS---SLIDSFVNRLLWGLVRWDAVYFLRIAEHGYSYEH 78 (443)
T ss_pred CcccccchHHHHHHHHHHHHHhCcCCCCChHhhcCCCcccCCC---cchHhHHHHHHhcccchhHHHHHHHHHhCCCccc
Confidence 5688999999999999999998766667777666666531121 1113345678888999999999999999999999
Q ss_pred cccccccHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHhhchhhH
Q 020868 90 SYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASI 169 (320)
Q Consensus 90 ~~AFfPl~P~l~r~~~~~~~~~l~~~~~~~~~~~~a~~lvs~~~~~~a~~~ly~L~~~~~~~~~~a~~aall~~~~Pasi 169 (320)
++||||+||.++|.+++.+..++.+.++.......+|+++||+++.++++.+|+++++.+++++.|+.++++++++|+++
T Consensus 79 ~~AFfPl~P~lvr~~~~~~~~~l~~~l~~~~~l~~~~~~vs~~~~~la~~~L~~l~~~~~~~~~~a~~a~ll~~~~Pasi 158 (443)
T PF04188_consen 79 EWAFFPLYPLLVRLLSKSLLSPLYGLLSVGSALLNSGILVSNVAFLLAAVALYRLTRRVFKSRKLALLAALLFIFSPASI 158 (443)
T ss_pred cccccCcHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHccHHH
Confidence 99999999999999995544445444444555667899999999999999999999999989999999999999999999
Q ss_pred HHHhhchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q 020868 170 FYTSIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMHQAYDALFLKKRHFLAMWILVCGA 249 (320)
Q Consensus 170 f~~a~YtEslF~~l~~~~l~~~~~~~~~~a~~~~~la~~~RsnGil~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 249 (320)
|++++||||+|++++++|++.+++++++.+++++++|+++||||+++++++.++.++..+.+..++++..+..+.++..+
T Consensus 159 F~sa~YsEslf~~lsf~gl~~~~~~~~~~a~~~~~la~~~RsnGll~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~ 238 (443)
T PF04188_consen 159 FLSAPYSESLFALLSFAGLYLLERGRWWLAGLLFALATLTRSNGLLLAGFFAYELLGIYYLDLRQLRRQRRLVRALISAI 238 (443)
T ss_pred HhhcCccHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999988876543333334445567777888
Q ss_pred HhhHHhhhhHHHHhhhhhhhcccCCcCCCCCccccccCCcchhHhhhhccccccccch
Q 020868 250 LRCICIFAPFISFQVYGYFNMCLGRSPDEMRPWCKAKVPLLYNFIQSHYWYSKFEAEE 307 (320)
Q Consensus 250 l~~~iv~~P~~~~q~~~Y~~fC~~~~~~~~~~WC~~~~P~~Ys~vQ~~YWnvGfl~~~ 307 (320)
+.++++++|++++|+|+|.+||+.++.++.||||++++|++|+|||+|||||||+|.+
T Consensus 239 l~~~~i~~pf~~~q~~~y~~fC~~~~~~~~~~WC~~~~P~~Ys~vQ~~YWnvGfl~Yw 296 (443)
T PF04188_consen 239 LSGLLIFLPFVLFQYYAYYRFCPPRSFGDEPPWCNNTIPSIYSFVQSHYWNVGFLRYW 296 (443)
T ss_pred hhhHHHHHHHHHHHHHHHhhcCCCCCCCCCchhhhccCccchHHHHHHHHccchHHhc
Confidence 8899999999999999999999987543457999999999999999999999999998
No 2
>KOG2647 consensus Predicted Dolichyl-phosphate-mannose-protein mannosyltransferase [General function prediction only]
Probab=100.00 E-value=1.3e-60 Score=456.49 Aligned_cols=302 Identities=34% Similarity=0.567 Sum_probs=261.4
Q ss_pred CCCccHHH--HHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhccccccHHHHHHHh
Q 020868 4 LNFPHETQ--VFKSAAVSRLLLLALIVLWRALLSPYDTSAPLNPNCLVDPHQQQHSPNSSIGSRIESSIVWDSVYFVRIA 81 (320)
Q Consensus 4 ~~~~~~~~--vl~~~l~sR~~~~~i~~l~~~~~p~~dts~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~WDa~~f~~IA 81 (320)
++|+...+ +.+.++.+|+++++++.+++...-|.++++.+.+|+...+. ....+....+.++++.+|||+||++||
T Consensus 7 ~~~~~~~~~~~~~~~~~sRl~v~lLq~i~~~~~~~~~~~~~~n~p~~~~~~--s~~~~~~~~~~l~~l~~WDa~~FL~ia 84 (444)
T KOG2647|consen 7 SRDKSTLEYFVTRYAVFSRLIVLLLQFLANIAAIPDHTSDAFNLPRLSPRQ--SSFEDVVVKRLLGGLLSWDAEYFLFIA 84 (444)
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchhhhhcchhccccc--chHHHHHHHHHHhccchhhHHHHHHHH
Confidence 56777777 99999999999999999999544445567778887764422 122244567899999999999999999
Q ss_pred hcCCCccccccccccHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHH
Q 020868 82 QCGYEYEQSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLL 161 (320)
Q Consensus 82 ~~GY~~e~~~AFfPl~P~l~r~~~~~~~~~l~~~~~~~~~~~~a~~lvs~~~~~~a~~~ly~L~~~~~~~~~~a~~aall 161 (320)
||||.+||++||+||+|..+|.+... ..++.+.+|......++++.+|+.++++++..+|++++..++|++.+..|+++
T Consensus 85 e~gy~fEh~~AF~pl~P~~v~~~~~~-~~~~~~~l~~~~~~~i~~~~vn~~~f~la~~~Lyql~~~~~~~~k~s~~a~li 163 (444)
T KOG2647|consen 85 EHGYLFEHELAFFPLFPFVVRLVTEV-LRPIEPVLSLRSILLISAVLVNIFFFMLAAVALYQLTRIILHDPKISFYAALL 163 (444)
T ss_pred hhchHHhhhHHhccccHHHHHHHHHh-cccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHhhhhhe
Confidence 99999999999999999999999843 46788888888888899999999999999999999999999999999999999
Q ss_pred HhhchhhHHHHhhchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHH-HHHhhhhHHH
Q 020868 162 FCFNPASIFYTSIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMHQAYD-ALFLKKRHFL 240 (320)
Q Consensus 162 ~~~~Pasif~~a~YtEslF~~l~~~~l~~~~~~~~~~a~~~~~la~~~RsnGil~~~~~~~~~l~~~~~-~~~~~~~~~~ 240 (320)
||+|||+||++++||||+|+++++.|++.+++++...+.+++++++++||||+++.+++.+...+.... ...+.+|-..
T Consensus 164 FcfnPAsIF~ts~YSEsLfa~~s~~Gi~~~~~~~~~~~~~~~~l~~~~rSngil~~~~~~~~~~~~~F~~~L~~~~r~~~ 243 (444)
T KOG2647|consen 164 FCFNPASIFLTAGYSESLFALFSFLGILFLEKGRQFTGTLLFSLATLVRSNGILSAGFLMHSQNRGFFIFSLTMLNRLRQ 243 (444)
T ss_pred eEecchHhhhhHHhhHHHHHHHHHHHHHHHhcCCccceehHHHHHHHHHhhhhhhHHHHhhhhcceeeeeehHhhhhHHH
Confidence 999999999999999999999999999999999999999999999999999999999998874443221 1112222234
Q ss_pred HHHHHHHHHHhhHHhhhhHHHHhhhhhhhcccCCcCCCCCccccccCCcchhHhhhhccccccccchh
Q 020868 241 AMWILVCGALRCICIFAPFISFQVYGYFNMCLGRSPDEMRPWCKAKVPLLYNFIQSHYWYSKFEAEEA 308 (320)
Q Consensus 241 ~~~~~~~~~l~~~iv~~P~~~~q~~~Y~~fC~~~~~~~~~~WC~~~~P~~Ys~vQ~~YWnvGfl~~~~ 308 (320)
..+.++...+.++++.+|+..+|||+|.+||++++.+|.+|||..++|.+|+|||+|||||||+|.++
T Consensus 244 ~~~~i~~~~l~~l~~~~p~~~~qyy~y~~fC~~~~~~e~spwC~~~~p~~Ys~IQ~~YW~VGflkYwt 311 (444)
T KOG2647|consen 244 LFKQIVSLFLSILTFLLPLAAFQYYGYKLFCPPRTAWEKSPWCFGILPLIYSYIQSHYWNVGFLKYWT 311 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCCccccCcccceeeccchHHHHHHhcccceeeecc
Confidence 56777778888999999999999999999999998888899999999999999999999999999764
No 3
>COG5542 Predicted integral membrane protein [Function unknown]
Probab=99.94 E-value=2.8e-26 Score=220.70 Aligned_cols=219 Identities=20% Similarity=0.339 Sum_probs=172.1
Q ss_pred cccccHHHHHHHhhcCCCccccccccccHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020868 69 SIVWDSVYFVRIAQCGYEYEQSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMI 148 (320)
Q Consensus 69 ~~~WDa~~f~~IA~~GY~~e~~~AFfPl~P~l~r~~~~~~~~~l~~~~~~~~~~~~a~~lvs~~~~~~a~~~ly~L~~~~ 148 (320)
+.+||+.+.+..-..++...|+.+|+|.+|.-+|.++.+..+ + ...+++.++||+++..++..+|+++++.
T Consensus 71 l~~w~af~~~~~~f~~~~k~~~~~~~p~~~y~i~ii~~L~~~-~--------~~~l~~~l~s~~~~~~~ay~lY~~tk~~ 141 (420)
T COG5542 71 LVHWYAFIALNGGFVRVLKSHFADYFPLYLYWIRIINKLLSS-L--------YFILAIKLFSNIADFVAAYFLYKITKLR 141 (420)
T ss_pred HHHHHHHHHhhhhhhhhhhccccccCchHHHHHHHHHHHHhh-h--------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666666666555566678999999999999999876421 1 2468999999999999999999999999
Q ss_pred hCChhHHHHHHHHHhhchhhHHHHhhc--hhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcchhhHHHHHHHHHHHH
Q 020868 149 LKDPDAALCASLLFCFNPASIFYTSIY--SESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMH 226 (320)
Q Consensus 149 ~~~~~~a~~aall~~~~Pasif~~a~Y--tEslF~~l~~~~l~~~~~~~~~~a~~~~~la~~~RsnGil~~~~~~~~~l~ 226 (320)
+++.+.|..|..+++++|+.+++++.| |||+|+++++.|+|+..+++...+++++++|+++||||+++++++++++++
T Consensus 142 y~~~~~a~fa~i~~~~~P~~i~~s~iw~~teSlf~ll~~l~iyf~~~k~~~~a~~~faLa~l~Rsngi~~~p~fl~~~ik 221 (420)
T COG5542 142 YGLGSMARFATILVILSPSVIYNSAIWGQTESLFTLLSILAIYFFSIKKQIPALFFFALATLFRSNGIFLSPLFLIPLIK 221 (420)
T ss_pred cccchhhhheEEEEEeccHHHhhhhHHhccchHHHHHHHHHHHHHHccchhHHHHHHHHHHHhccchhHHHHHHHHHHHh
Confidence 988899999999999999999999999 999999999999999999999999999999999999999999999998776
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHhhHHhhhhH------HHHhhhhhhhcccCCcCCCCCccccccCCcchhHhhhhccc
Q 020868 227 QAYDALFLKKRHFLAMWILVCGALRCICIFAPF------ISFQVYGYFNMCLGRSPDEMRPWCKAKVPLLYNFIQSHYWY 300 (320)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~l~~~iv~~P~------~~~q~~~Y~~fC~~~~~~~~~~WC~~~~P~~Ys~vQ~~YWn 300 (320)
... -|. .+..+..+.+.....+.|. .--++.+|.+.|+. =+||++..|++|++||+||||
T Consensus 222 ~~~-----ik~---i~~~l~~~~l~~~~ll~~~~~~~~~~~~~~~~y~~~~~~------f~~~~~~~~~iy~~I~~~~w~ 287 (420)
T COG5542 222 NRK-----IKI---IWYLLPSGSLTYLSLLMPAWILGRNAFEIFLGYWRQSNG------FKEQGKNAPNIYSWIPNNYWN 287 (420)
T ss_pred hhh-----HHH---hhhhhhhHHHHHHHHHHHHHHhCccchhhhhhhhccccc------chHHHhcchHHHHhhccceee
Confidence 321 000 1111111222222233333 22344455555543 359999999999999999999
Q ss_pred cccccchhhh
Q 020868 301 SKFEAEEANA 310 (320)
Q Consensus 301 vGfl~~~~~~ 310 (320)
||+.+++..-
T Consensus 288 vg~~~~~~~~ 297 (420)
T COG5542 288 VGLPKYWISN 297 (420)
T ss_pred eeeeEEeecc
Confidence 9999987543
No 4
>PF13231 PMT_2: Dolichyl-phosphate-mannose-protein mannosyltransferase
Probab=99.05 E-value=3.3e-08 Score=83.53 Aligned_cols=117 Identities=20% Similarity=0.204 Sum_probs=97.9
Q ss_pred cccHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHhhchhhHHHHh
Q 020868 94 LPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYTS 173 (320)
Q Consensus 94 fPl~P~l~r~~~~~~~~~l~~~~~~~~~~~~a~~lvs~~~~~~a~~~ly~L~~~~~~~~~~a~~aall~~~~Pasif~~a 173 (320)
.|+++.+++.....++. ...+..++|.+++.++.+.+|++.++.+ +++.+..+++++++.|..+..+.
T Consensus 3 pPl~~~~~~~~~~l~G~-----------~~~~~~~~~~l~~~~~~~~~y~i~r~~~-~~~~a~~~~l~~~~~p~~~~~~~ 70 (159)
T PF13231_consen 3 PPLYFLLLALFFKLFGD-----------SVWALRLFNILFSLLTLLLIYLIARRLF-GRRAALIAALLLALSPMFIFYSA 70 (159)
T ss_pred ChHHHHHHHHHHHHhCc-----------CHHHHHHHHHHHHHHHHHHHHHHHHHHC-CchHHHHHHHHHHHhHHHHHHHH
Confidence 48999999988877531 2466778999999999999999999998 48999999999999999987774
Q ss_pred -hchhHHHHHHHHHHHHHHHh-------hhHHHHHHHHHHHHhhcchhhHHHHHHHH
Q 020868 174 -IYSESLYALFSVGGLYYLMS-------GALNISVLWLAISGCARSNGVLNAGYFCF 222 (320)
Q Consensus 174 -~YtEslF~~l~~~~l~~~~~-------~~~~~a~~~~~la~~~RsnGil~~~~~~~ 222 (320)
..+|++..++..++++...+ +.+.+++++.+++.++|+++++..+.++.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~k~~~~~~~~~~~~ 127 (159)
T PF13231_consen 71 SARPDMLLLFFFLLALYAFYRYIKSKKWRWWILAGLLLGLAFLTKYTFLLLIPALLL 127 (159)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77899999999998887753 22457899999999999999988775544
No 5
>TIGR03766 conserved hypothetical integral membrane protein. Models TIGR03110, TIGR03111, and TIGR03112 describe a three-gene system found in several Gram-positive bacteria, where TIGR03110 is distantly related to a putative transpeptidase, exosortase (TIGR02602). This model describes a small clade that correlates by both gene clustering and phyletic pattern, although imperfectly, to the three gene system. Both this narrow clade, and the larger set of full-length homologous integral membrane proteins, have an especially well-conserved region near the C-terminus with an invariant tyrosine. The function is unknown.
Probab=98.80 E-value=9.9e-07 Score=89.35 Aligned_cols=145 Identities=19% Similarity=0.154 Sum_probs=103.8
Q ss_pred ccccHHHHHHHhhcCCCc--cccccccc---cHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 020868 70 IVWDSVYFVRIAQCGYEY--EQSYAFLP---LLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRL 144 (320)
Q Consensus 70 ~~WDa~~f~~IA~~GY~~--e~~~AFfP---l~P~l~r~~~~~~~~~l~~~~~~~~~~~~a~~lvs~~~~~~a~~~ly~L 144 (320)
..||.....+.|.+|-.. ++-.+.+| ++.+..+.+...++. . .....-++|.++..++.+++|++
T Consensus 90 p~~D~~~v~~~A~~~~~~~~~~Y~~~yPnn~g~~l~~~~l~kifg~--------~--~~~~~~llNil~~~~si~liy~i 159 (483)
T TIGR03766 90 IGWDAGAVHTAATKSNESSISNYFSRNPNNLFLLLFMHFLYKLFGE--------T--SWLFFDVVNIVLVDLSALILYKA 159 (483)
T ss_pred cCcCHHHHHHHHhcCCCcccCceeeECCchHHHHHHHHHHHHHhCc--------c--HHHHHHHHHHHHHHHHHHHHHHH
Confidence 578888888888754221 12233344 455666666555421 1 23456789999999999999999
Q ss_pred HHHHhCChhHHHHHHHHHhhchhhHHHH-hhchhHHHHHHHHHHHHHHH---h-----hh---HHHHHHHHHHHHhhcch
Q 020868 145 SVMILKDPDAALCASLLFCFNPASIFYT-SIYSESLYALFSVGGLYYLM---S-----GA---LNISVLWLAISGCARSN 212 (320)
Q Consensus 145 ~~~~~~~~~~a~~aall~~~~Pasif~~-a~YtEslF~~l~~~~l~~~~---~-----~~---~~~a~~~~~la~~~Rsn 212 (320)
+++++ +++.|..+++++++.|+-..+. .+|||...+++..++++... + ++ ..++|++.+++...|||
T Consensus 160 ~k~lf-~~~~a~~a~~l~~l~~~~~~y~~~~Ysd~~~l~~~~l~l~~~~~~~~~~~~~~~~~~~Il~gillal~~~iKp~ 238 (483)
T TIGR03766 160 VKKVF-NKKKAFVALYLFVLLLALSPYILIPYTDTWVLPFVSLFLFLYTVISKKTDLRKKIALSILLGVLLAIAYFIKPS 238 (483)
T ss_pred HHHHh-CchhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999 5688999999999998876554 79999999888777755332 2 11 24789999999999999
Q ss_pred hhHHHHHHHHHHH
Q 020868 213 GVLNAGYFCFQTM 225 (320)
Q Consensus 213 Gil~~~~~~~~~l 225 (320)
|++..+.++...+
T Consensus 239 ~iI~liA~~i~~~ 251 (483)
T TIGR03766 239 AIIFVIAIFIVLF 251 (483)
T ss_pred chHHHHHHHHHHH
Confidence 9998866554433
No 6
>PF02366 PMT: Dolichyl-phosphate-mannose-protein mannosyltransferase ; InterPro: IPR003342 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Dolichyl-phosphate-mannose-protein mannosyltransferase proteins 2.4.1.109 from EC belong to the glycosyltransferase family 39 (GT39 from CAZY) and are responsible for O-linked glycosylation of proteins. They catalyse the reaction: Dolichyl phosphate D-mannose + protein -> dolichyl phosphate + O-D-mannosyl-protein. The transfer of mannose to seryl and threonyl residues of secretory proteins is catalyzed by a family of protein mannosyltransferases in Saccharomyces cerevisiae coded for by seven genes (PMT1-7). Protein O-glycosylation is essential for cell wall rigidity and cell integrity and this protein modification is vital for S. cerevisiae [].; GO: 0000030 mannosyltransferase activity, 0006493 protein O-linked glycosylation, 0016020 membrane
Probab=98.58 E-value=8.1e-06 Score=74.99 Aligned_cols=96 Identities=20% Similarity=0.217 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHhhchhhHHHH-hhchhHHHHHHHHHHHHHHHhh-------
Q 020868 123 GLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYT-SIYSESLYALFSVGGLYYLMSG------- 194 (320)
Q Consensus 123 ~~a~~lvs~~~~~~a~~~ly~L~~~~~~~~~~a~~aall~~~~Pasif~~-a~YtEslF~~l~~~~l~~~~~~------- 194 (320)
..+.-++|.+++.++++++|.+.++..++++.|..++++++++|.-+..+ ...+|+...+++..+++...+.
T Consensus 82 ~~~~R~~~~l~~~~~~~l~y~~~~~~~~s~~~al~aa~l~~~~~~~~~~sr~~~~D~~l~~f~~la~~~~~~~~~~~~~~ 161 (245)
T PF02366_consen 82 YWAARLPSALFGALTVPLVYLILRRLFGSRRAALLAALLLALDPSLIVQSRYALLDSILLFFILLAIYCLLRWYRYQPFR 161 (245)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHhhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccccc
Confidence 56788899999999999999999999988999999999999999999887 6789999887777776655432
Q ss_pred -----hHHHHHHHHHHHHhhcchhhHHHH
Q 020868 195 -----ALNISVLWLAISGCARSNGVLNAG 218 (320)
Q Consensus 195 -----~~~~a~~~~~la~~~RsnGil~~~ 218 (320)
...++++..++|.+++.+|++..+
T Consensus 162 ~~~~~~~~l~gi~lGla~~~K~~~~~~~~ 190 (245)
T PF02366_consen 162 RKWWLWLLLAGIALGLAILTKGPGLLLVL 190 (245)
T ss_pred cccHHHHHHHHHHHHHHHHhchhHHHHHH
Confidence 124678999999999999987554
No 7
>TIGR03663 conserved hypothetical protein TIGR03663. Members of this protein family, uncommon and rather sporadically distributed, are found almost always in the same genomes as members of family TIGR03662, and frequently as a nearby gene. Members show some N-terminal sequence similarity with Pfam family pfam02366, dolichyl-phosphate-mannose-protein mannosyltransferase. The few invariant residues in this family, found toward the N-terminus, include a dipeptide DE, a tripeptide HGP, and two different Arg residues. Up to three members may be found in a genome. The function is unknown.
Probab=98.22 E-value=0.00026 Score=71.02 Aligned_cols=135 Identities=17% Similarity=0.177 Sum_probs=95.9
Q ss_pred ccccHHHHHHHh----hcC-CCccccccccccHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 020868 70 IVWDSVYFVRIA----QCG-YEYEQSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRL 144 (320)
Q Consensus 70 ~~WDa~~f~~IA----~~G-Y~~e~~~AFfPl~P~l~r~~~~~~~~~l~~~~~~~~~~~~a~~lvs~~~~~~a~~~ly~L 144 (320)
..||-.+|-.++ ++| |.++. ....|+++.++......++ . ...++-+.+.+++ +.++++|.+
T Consensus 24 ~~~DEa~ya~~a~~ml~~g~~~~~p-~~h~Pll~wl~A~~~~lFG--------~---se~a~RL~~aL~g-~~v~l~~~~ 90 (439)
T TIGR03663 24 FHHDEAIHASFILKLLETGVYSYDP-AYHGPFLYHITAAVFHLFG--------I---SDATARLLPAVFG-VLLPLTAWL 90 (439)
T ss_pred CCCCchhHHHHHHHHHhcCCCCcCC-CCCCCHHHHHHHHHHHHhC--------C---CHHHHHHHHHHHH-HHHHHHHHH
Confidence 355644444444 445 34432 2336999998888766542 1 1367778888888 446778888
Q ss_pred HHHHhCChhHHHHHHHHHhhchhhHHHH-hhchhHHHHHHHHHHHHHHHh------hh-HHHHHHHHHHHHhhcchhhHH
Q 020868 145 SVMILKDPDAALCASLLFCFNPASIFYT-SIYSESLYALFSVGGLYYLMS------GA-LNISVLWLAISGCARSNGVLN 216 (320)
Q Consensus 145 ~~~~~~~~~~a~~aall~~~~Pasif~~-a~YtEslF~~l~~~~l~~~~~------~~-~~~a~~~~~la~~~RsnGil~ 216 (320)
.++.+ +++.+..++++.+++|..+..+ ..-+|.+..++..++++.+.+ ++ .+++++..+++.+++.++.+.
T Consensus 91 ~r~~~-~~~~al~AAllla~sp~~~~~sr~~~~D~~l~~f~~lal~~l~r~~~~~~~~~~~lag~~~gLa~ltKg~~~l~ 169 (439)
T TIGR03663 91 YRKRL-GDNEVLWAAVLLAFSPVMVYYSRFMRNDIFVAFFTLLAVGAAFRYLDTGKRRYLFLAASALALAFTSKENAYLI 169 (439)
T ss_pred HHHHc-CcHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888 5778999999999999998776 577888888888777776543 12 357899999999999997765
Q ss_pred HH
Q 020868 217 AG 218 (320)
Q Consensus 217 ~~ 218 (320)
.+
T Consensus 170 ~~ 171 (439)
T TIGR03663 170 IL 171 (439)
T ss_pred HH
Confidence 53
No 8
>COG1807 ArnT 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]
Probab=98.04 E-value=0.00056 Score=69.91 Aligned_cols=153 Identities=20% Similarity=0.141 Sum_probs=104.4
Q ss_pred ccccHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHhhchhhHHHH
Q 020868 93 FLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYT 172 (320)
Q Consensus 93 FfPl~P~l~r~~~~~~~~~l~~~~~~~~~~~~a~~lvs~~~~~~a~~~ly~L~~~~~~~~~~a~~aall~~~~Pasif~~ 172 (320)
=-|+..++......+++ ....+..+.+.++..+++++.|.++++++++ +.|..|++++...|.-+..+
T Consensus 64 kPPl~~Wl~a~~~~lfG-----------~~~~~~rl~~~l~~~~~~~l~y~l~k~l~~~-~~a~~aali~~~~p~~~~~~ 131 (535)
T COG1807 64 KPPLVYWLQALSYLLFG-----------VNEWSARLPSALAGALTALLVYWLAKRLFGR-LAALLAALILLLTPLFFLIG 131 (535)
T ss_pred CCcHHHHHHHHHHHHcC-----------cchHHHHHHHHHHHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHh
Confidence 35777777776555532 1246677788888889999999999999965 89999999999999999877
Q ss_pred -hhchhHHHHHHHHHHHHHHH---hh--h---HHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Q 020868 173 -SIYSESLYALFSVGGLYYLM---SG--A---LNISVLWLAISGCARSNGVLNAGYFCFQTMHQAYDALFLKKRHFLAMW 243 (320)
Q Consensus 173 -a~YtEslF~~l~~~~l~~~~---~~--~---~~~a~~~~~la~~~RsnGil~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 243 (320)
..-+++..+++..++++.+. ++ + ++..++..|++.+++.++++..+.++...+. . .+.|......
T Consensus 132 ~~~~~D~~l~~f~~la~~~~~~~~~~~~~~~~~l~~gl~lGL~~ltKg~~~~~l~~~~~~~l~-~-----~~~~~~~~~~ 205 (535)
T COG1807 132 RLALLDAALAFFLTLALALLYLALRARGKLKWLLLLGLALGLGFLTKGPGALLLPLILLLLLL-A-----PRLRRLLRDL 205 (535)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH-H-----HhHHHHHHHH
Confidence 56688877777766666553 22 1 3567899999999999888877721111111 1 1112112223
Q ss_pred HHHHHHHhhHHhhhhHHHHh
Q 020868 244 ILVCGALRCICIFAPFISFQ 263 (320)
Q Consensus 244 ~~~~~~l~~~iv~~P~~~~q 263 (320)
+...+.+.++++..|+...+
T Consensus 206 ~~~~g~~l~~l~~~pW~~~~ 225 (535)
T COG1807 206 RLWLGLLLGLLPVLPWLLAI 225 (535)
T ss_pred HHHHHHHHHHHHHhhHHHHH
Confidence 44556666777888888643
No 9
>PRK13279 arnT 4-amino-4-deoxy-L-arabinose transferase; Provisional
Probab=97.76 E-value=0.0053 Score=63.38 Aligned_cols=107 Identities=11% Similarity=0.015 Sum_probs=75.8
Q ss_pred cccHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHhhchhhHHHH-
Q 020868 94 LPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYT- 172 (320)
Q Consensus 94 fPl~P~l~r~~~~~~~~~l~~~~~~~~~~~~a~~lvs~~~~~~a~~~ly~L~~~~~~~~~~a~~aall~~~~Pasif~~- 172 (320)
-|+..+++.....+++ . ...++.+.|.++.+++++++|.++++.++|++.|..|++++..+|.-...+
T Consensus 63 PPL~yWl~Als~~LFG--------~---~~~a~RLpsaL~~~lt~llvy~larrl~~~r~~AllAaLIlls~~~v~~~g~ 131 (552)
T PRK13279 63 PIAGYWINSIGQWLFG--------D---NNFGVRFGSVFSTLLSALLVYWLALRLWRDRRTALLAALIYLSLFLVYGIGT 131 (552)
T ss_pred CcHHHHHHHHHHHHcC--------C---CcHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 4677777776555532 1 246788889999999999999999999988999999999998887654332
Q ss_pred hhchhHHHHHHHHH---HHHHHHhh--------hHHHHHHHHHHHHhhcc
Q 020868 173 SIYSESLYALFSVG---GLYYLMSG--------ALNISVLWLAISGCARS 211 (320)
Q Consensus 173 a~YtEslF~~l~~~---~l~~~~~~--------~~~~a~~~~~la~~~Rs 211 (320)
..-++++.+++... +++...+. .+.+.|+..+++.+++.
T Consensus 132 ~a~~D~~l~~fi~lal~~f~~~~~~~~~~~~~~~~lllGla~Glg~LTKG 181 (552)
T PRK13279 132 YAVLDPMITLWLTAAMCSFWLALQAQTRRGKIGGYLLLGLACGMGFMTKG 181 (552)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHhcc
Confidence 23447765555443 45444321 14466788899999996
No 10
>PF09594 DUF2029: Protein of unknown function (DUF2029); InterPro: IPR018584 This is a putative transmembrane protein from prokaryotes. It is likely to be conserved between Mycobacterium species []. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=97.46 E-value=0.0077 Score=54.22 Aligned_cols=66 Identities=18% Similarity=0.087 Sum_probs=55.5
Q ss_pred HHHHHHhhchhhHHHHhhchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcchhhHHHHHHHH
Q 020868 157 CASLLFCFNPASIFYTSIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCF 222 (320)
Q Consensus 157 ~aall~~~~Pasif~~a~YtEslF~~l~~~~l~~~~~~~~~~a~~~~~la~~~RsnGil~~~~~~~ 222 (320)
.+..+.++.|.-.-+..+.+|.+..++...+++..+|+|.+.+|++.++++.++..+++...+++.
T Consensus 57 ~~~~~~~~~p~~~~~~~gq~~~l~~~l~~~a~~~~~r~r~~~agv~lgla~~~K~~p~~~l~~ll~ 122 (241)
T PF09594_consen 57 LALLLLAFPPVLSALGLGQFDLLVAALLLLALLALRRGRPWLAGVLLGLAAAIKLYPALLLPALLI 122 (241)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334566777775566678999999999999999999999999999999999999999998775543
No 11
>PLN02841 GPI mannosyltransferase
Probab=97.44 E-value=0.0092 Score=59.70 Aligned_cols=177 Identities=15% Similarity=0.182 Sum_probs=119.2
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhccccccHHHHHHHhhcCCC
Q 020868 7 PHETQVFKSAAVSRLLLLALIVLWRALLSPYDTSAPLNPNCLVDPHQQQHSPNSSIGSRIESSIVWDSVYFVRIAQCGYE 86 (320)
Q Consensus 7 ~~~~~vl~~~l~sR~~~~~i~~l~~~~~p~~dts~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~WDa~~f~~IA~~GY~ 86 (320)
+..+.++..+++.|++.+..... .|..-+..-++ .+...-.||.++..--..-|+
T Consensus 6 ~~~~~vll~a~~lRl~L~~yg~~-------~D~~~eVsytd------------------idY~vftDga~lv~~G~SPY~ 60 (440)
T PLN02841 6 MTLRSLLLASALLRVALIVYGEW-------QDAHMEVRYTD------------------VDYLVFSDAAALVASGKSPFA 60 (440)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHH-------hccCccccccc------------------cchHHHHHHHHHHHcCCCCCC
Confidence 33467888888899988773211 23222221111 122245789888765544443
Q ss_pred ccccccccccHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHhhch
Q 020868 87 YEQSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNP 166 (320)
Q Consensus 87 ~e~~~AFfPl~P~l~r~~~~~~~~~l~~~~~~~~~~~~a~~lvs~~~~~~a~~~ly~L~~~~~~~~~~a~~aall~~~~P 166 (320)
.++.-.-|++-.++ +.... .. ...|-++=.++-++++++++++.+..-.+++.+...+.++.+||
T Consensus 61 -r~TYrytPLLa~Ll--lPn~~---~~---------~~fgk~LF~l~Dll~a~ll~~il~~~~~~~~~~~~~a~~wL~NP 125 (440)
T PLN02841 61 -RDTYRYSPLLALLL--VPNSL---LH---------RSWGKFLFSAADLLVGLFIHTILRLRGVPEKVCTWSVMVWLFNP 125 (440)
T ss_pred -CCCCCcChHHHHHH--cchhh---hh---------hhHHHHHHHHHHHHHHHHHHHHHHHhCccccccHHHHHHHHhCc
Confidence 25677788877766 11110 00 11233333466777888888887644323445566688899999
Q ss_pred hhHHHH-hhchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcchhhHHHHHHHHH
Q 020868 167 ASIFYT-SIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQ 223 (320)
Q Consensus 167 asif~~-a~YtEslF~~l~~~~l~~~~~~~~~~a~~~~~la~~~RsnGil~~~~~~~~ 223 (320)
..+-.+ .+=+|++-.++.++.++.+.+++...|+++.|+++-.|---++.+++++..
T Consensus 126 lti~istrGSse~i~~~lvl~~L~~l~~g~~~~Aa~~lglavhfkiYPiIy~~Pi~l~ 183 (440)
T PLN02841 126 FTFTIGTRGNCEPIVCAVILWILICLMNGRLLQAAFWYGLVVHFRIYPIIYALPIILV 183 (440)
T ss_pred HHHHHhcccchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 999777 688999999999999999999999999999999999998888777666554
No 12
>PF09852 DUF2079: Predicted membrane protein (DUF2079); InterPro: IPR018650 This entry is represented by Sulfolobus virus STSV1, Orf64. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This entry contains a family of various integral membrane proteins with no known function.
Probab=97.36 E-value=0.0074 Score=60.65 Aligned_cols=138 Identities=20% Similarity=0.180 Sum_probs=98.9
Q ss_pred ccccHHHHHHHhh---cCCC----ccc----cccccccHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHH
Q 020868 70 IVWDSVYFVRIAQ---CGYE----YEQ----SYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAA 138 (320)
Q Consensus 70 ~~WDa~~f~~IA~---~GY~----~e~----~~AFfPl~P~l~r~~~~~~~~~l~~~~~~~~~~~~a~~lvs~~~~~~a~ 138 (320)
..||=.-|.+... ||-. .|. ...|-|.+-.+.- +-.+.. ....-.++..++..+++
T Consensus 8 ~~~DlGif~Q~~~~~~~g~~~~~t~~~~~~lg~HfsPil~ll~P-ly~l~P------------s~~tLli~Qal~la~~~ 74 (449)
T PF09852_consen 8 PSFDLGIFDQAIWSYAHGRAPISTIEGQNHLGDHFSPILYLLAP-LYRLFP------------SPLTLLIVQALLLALGA 74 (449)
T ss_pred CchhHHHHHHHHHHHhCCCCceecccccccccccchHHHHHHHH-HHHHhC------------CHHHHHHHHHHHHHHHH
Confidence 5678777777643 2321 111 2456676655543 222221 13556678888889999
Q ss_pred HHHHHHHHHHhCChhHHHHHHHHHhhchhhHHHH--hhchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcchhhHH
Q 020868 139 VYFYRLSVMILKDPDAALCASLLFCFNPASIFYT--SIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLN 216 (320)
Q Consensus 139 ~~ly~L~~~~~~~~~~a~~aall~~~~Pasif~~--a~YtEslF~~l~~~~l~~~~~~~~~~a~~~~~la~~~RsnGil~ 216 (320)
+.+|++.++...+++.|...++.|.++|+-.... -...|.++.-+.++++++++++|+..+.++..+..++|..--+.
T Consensus 75 ~pl~~lar~~~~~~~~a~~~~~~ylL~p~~~~~~~~dFH~~~~avPll~~~~~~~~~~r~~~~~~~~ll~llvKEd~~l~ 154 (449)
T PF09852_consen 75 IPLYRLARRRLLSRRLALLIALAYLLSPGLQGANLFDFHPVAFAVPLLLWALYALERRRWRLFILWALLLLLVKEDLGLT 154 (449)
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHhHHHHhhhhCCCcHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHhhHHHH
Confidence 9999999999878999999999999999887543 24567777678888888899999999999999999999755444
Q ss_pred HHHH
Q 020868 217 AGYF 220 (320)
Q Consensus 217 ~~~~ 220 (320)
.+.+
T Consensus 155 v~~~ 158 (449)
T PF09852_consen 155 VAGI 158 (449)
T ss_pred HHHH
Confidence 4433
No 13
>COG1287 Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only]
Probab=96.94 E-value=0.075 Score=57.18 Aligned_cols=124 Identities=20% Similarity=0.188 Sum_probs=85.7
Q ss_pred CCccccccccccHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHhh
Q 020868 85 YEYEQSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCF 164 (320)
Q Consensus 85 Y~~e~~~AFfPl~P~l~r~~~~~~~~~l~~~~~~~~~~~~a~~lvs~~~~~~a~~~ly~L~~~~~~~~~~a~~aall~~~ 164 (320)
|.+....-|-|+++.++...+..+.... + .....++...-.+...++++..|.+++++. |++.+..++++..+
T Consensus 79 YP~G~~i~~~pl~~~l~~~~~~~~~~~~----~--~~~~~~~~~~PailG~L~vI~vYl~~r~i~-~~~~g~~aa~ll~~ 151 (773)
T COG1287 79 YPPGSPIDFPPLFLYLTAALGLILGSIF----P--VSLETAALLFPAILGVLTVIPVYLLGRRIL-GDKTGLLAALLLAL 151 (773)
T ss_pred CCCCCCCCCCchHHHHHHHHHHHHHccC----c--hHHHHHHHHhhHHHhhHHHHHHHHHHHHHh-cchhhHHHHHHHHH
Confidence 5555455599999999999887653211 1 234566777778888899999999999999 67999999999999
Q ss_pred chhhHHHHh-hc-----hhHHHHHHHHHHHHHHHh-----hhH----HHHHHHHHHHHhhcchhhH
Q 020868 165 NPASIFYTS-IY-----SESLYALFSVGGLYYLMS-----GAL----NISVLWLAISGCARSNGVL 215 (320)
Q Consensus 165 ~Pasif~~a-~Y-----tEslF~~l~~~~l~~~~~-----~~~----~~a~~~~~la~~~RsnGil 215 (320)
.|+-+.=+. .+ .|.++..+++.++....+ ++. .+||+..++...+=+..-.
T Consensus 152 ~p~~~~rt~~G~~d~~~~~~~~~~~~l~~~~~aL~~~~~~~~~~~~~~lag~~~~l~~~sW~g~~~ 217 (773)
T COG1287 152 APGYLSRTVAGFYDTDMFELLLPLFALFFFLLALKAAKKLKKPVIYALLAGLALGLLALAWGGYYY 217 (773)
T ss_pred hhHHHHHhhcCccCCCchHHHHHHHHHHHHHHHHHHhhhhccccHHHHHHHHHHHHHHHHhCcHHH
Confidence 999433332 22 455666666666555544 132 3566777777776655333
No 14
>PF02516 STT3: Oligosaccharyl transferase STT3 subunit; InterPro: IPR003674 N-linked glycosylation is a ubiquitous protein modification, and is essential for viability in eukaryotic cells. A lipid-linked core-oligosaccharide is assembled at the membrane of the endoplasmic reticulum and transferred to selected asparagine residues of nascent polypeptide chains by the oligosaccharyl transferase (OTase) complex []. This family consists of the oligsacharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosccharyl transferase (OTase) complex of proteins and is required for its activity [].; GO: 0004576 oligosaccharyl transferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 3AAG_B 2ZAI_D 2ZAG_A 3RCE_A.
Probab=96.93 E-value=0.029 Score=56.31 Aligned_cols=137 Identities=18% Similarity=0.196 Sum_probs=75.8
Q ss_pred CCCccccccccccHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHh
Q 020868 84 GYEYEQSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFC 163 (320)
Q Consensus 84 GY~~e~~~AFfPl~P~l~r~~~~~~~~~l~~~~~~~~~~~~a~~lvs~~~~~~a~~~ly~L~~~~~~~~~~a~~aall~~ 163 (320)
.|++..+.-+.|++|.+.-.+...+.. .+. .....++..+--+.+.+.++.+|.++++. +|++.|..|+++.+
T Consensus 61 ~yP~G~~i~~~pl~~~l~~~~~~~~~~-----~~~-~~l~~v~~~~ppvl~~L~vi~~y~~~~~~-~~~~~Gl~aA~l~a 133 (483)
T PF02516_consen 61 WYPWGRPIDWPPLFPYLTAAFYAILGG-----FGP-VSLYEVAFWLPPVLGALTVIPVYLLGRRL-GGRKAGLLAAFLLA 133 (483)
T ss_dssp ---TTS---TT-HHHHHHHHHHHS-SS------HH-----HHHHHHHHHHGGGGHHHHHHHHHHT-T-HHHHHHHHHHHT
T ss_pred cCCCCCccCcccHHHHHHHHHHHHHHH-----hcc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCchHHHHHHHHH
Confidence 455555567889999997766665321 111 11223344445566666778899999665 48999999999999
Q ss_pred hchhhHHHH-hhc-----hhHHHHHHHHHHHHHHHhhhH------HHHHHHHHHHHhhcchh-hHHHHHHHHHHHHH
Q 020868 164 FNPASIFYT-SIY-----SESLYALFSVGGLYYLMSGAL------NISVLWLAISGCARSNG-VLNAGYFCFQTMHQ 227 (320)
Q Consensus 164 ~~Pasif~~-a~Y-----tEslF~~l~~~~l~~~~~~~~------~~a~~~~~la~~~RsnG-il~~~~~~~~~l~~ 227 (320)
+.|+-+.=| ++| .|.+|.++++..+....+++. .++|+..++...+=..+ ++..+++....+..
T Consensus 134 ~~p~~l~RT~~G~~D~~~~~~~f~~l~~~~~~~a~~~~~~~~~~~~laGl~~~l~~~~W~g~~~~~~~~~~~~~~~~ 210 (483)
T PF02516_consen 134 ISPGYLSRTMAGFYDHHMLELFFPLLIIYFFLLALKSAKRPLIYAVLAGLALGLYALAWGGYQVFLLIFILLFVIYQ 210 (483)
T ss_dssp TSHHHHHTSSTT--SGGGGTTHHHHHHHHHHHHHHHH------THHHHHHHHHHHHHHHS-GGHHHHHHHHHHHHHH
T ss_pred HhHHHHHHhcCCCcccchHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH
Confidence 999933323 454 345555555555443333332 35667777777766666 66555555544443
No 15
>PF03901 Glyco_transf_22: Alg9-like mannosyltransferase family; InterPro: IPR005599 Members of this family are glycosylphosphatidylinositol mannosyltransferase enzymes 2.4.1.- from EC [, ]. At least some members are localised in endoplasmic reticulum and involved in GPI anchor biosynthesis [, ]. In yeast the SMP3 (YOR149C) has been implemented in plasmid stability [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0006506 GPI anchor biosynthetic process, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=96.89 E-value=0.082 Score=52.41 Aligned_cols=102 Identities=21% Similarity=0.189 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHhhchhhHHHH-hhchhHHHHHHHHHHHHHHHh--------
Q 020868 123 GLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYT-SIYSESLYALFSVGGLYYLMS-------- 193 (320)
Q Consensus 123 ~~a~~lvs~~~~~~a~~~ly~L~~~~~~~~~~a~~aall~~~~Pasif~~-a~YtEslF~~l~~~~l~~~~~-------- 193 (320)
..+.-++..+....+-..+|++.++.. +++.|..+.++.++++...+.+ -.++|++-+.++..+++...+
T Consensus 81 ~~~~Rl~~~~~s~~~d~~~~~~~~~~~-~~~~a~~~l~l~~~s~~~~~~~~Rtlsns~e~~l~~~al~~~~~~~~~~~~~ 159 (418)
T PF03901_consen 81 FYAPRLVLALLSALSDYYLYRLVKRLF-GSSVALWALLLSLFSWFMFYYSSRTLSNSFETILVLLALYLWLRSLSRSNSS 159 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhhhhhhHHHhhhHHHHhhcccCccHHHHHHHHHHHHHHHHhhccCCCc
Confidence 344445555566667778888888877 4678889999999999988776 699999999999999988874
Q ss_pred ----hhHHHHHHHHHHHHhhcchhhHHHHHHHHHHH
Q 020868 194 ----GALNISVLWLAISGCARSNGVLNAGYFCFQTM 225 (320)
Q Consensus 194 ----~~~~~a~~~~~la~~~RsnGil~~~~~~~~~l 225 (320)
+.....+.+.+++...|++.++..+++....+
T Consensus 160 ~~~~~~~~~~~~l~~~~~~~Rpt~~~~~~pl~l~~l 195 (418)
T PF03901_consen 160 SSSKRYLLAIGLLAGLAVFFRPTSALFWLPLGLYLL 195 (418)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22356778889999999999998887766544
No 16
>PF06728 PIG-U: GPI transamidase subunit PIG-U; InterPro: IPR009600 Many eukaryotic proteins are anchored to the cell surface via glycosylphosphatidylinositol (GPI), which is posttranslationally attached to the C terminus by GPI transamidase. The mammalian GPI transamidase is a complex of at least four subunits, GPI8, GAA1, PIG-S, and PIG-T. PIG-U is thought to represent a fifth subunit in this complex and may be involved in the recognition of either the GPI attachment signal or the lipid portion of GPI [].; GO: 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=96.86 E-value=0.11 Score=51.39 Aligned_cols=137 Identities=19% Similarity=0.242 Sum_probs=93.7
Q ss_pred hhcCCC-ccc-cccccccHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------
Q 020868 81 AQCGYE-YEQ-SYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKD------- 151 (320)
Q Consensus 81 A~~GY~-~e~-~~AFfPl~P~l~r~~~~~~~~~l~~~~~~~~~~~~a~~lvs~~~~~~a~~~ly~L~~~~~~~------- 151 (320)
-++|.+ ||. ....-|++-.+.+.+... . ... . ......-++-.++-++++..+++..+..-++
T Consensus 44 ~~~g~spY~g~v~h~~PLlL~l~~~l~~~--~-~~~----~-~~~~~~~llf~~~Dl~~A~~L~~i~~~~~~~~~~~~~~ 115 (382)
T PF06728_consen 44 YKHGISPYSGGVFHQPPLLLALFSFLLKS--S-PNS----P-NSPILISLLFILVDLLIAWLLYRIAKSYQKQESKRQKS 115 (382)
T ss_pred HHcCCCCcCCCCccCcCHHHHHHHHHHhc--c-ccc----c-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcC
Confidence 366642 442 355567766666655210 0 000 0 0123344455678888999999997654421
Q ss_pred ----hhHHHHHHHHHhhchhhHHHHh-hchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcchhhHHHHHHHHHHH
Q 020868 152 ----PDAALCASLLFCFNPASIFYTS-IYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTM 225 (320)
Q Consensus 152 ----~~~a~~aall~~~~Pasif~~a-~YtEslF~~l~~~~l~~~~~~~~~~a~~~~~la~~~RsnGil~~~~~~~~~l 225 (320)
+......+.+|.+||-++.... .=|.++-.++....++...+++...+++..++++..+..-+++..+++....
T Consensus 116 ~~~~~~~~~lv~~~YLfNP~tIlscva~ST~~f~nl~i~~sl~~a~~g~~~~s~i~lAlatylSlYpi~Ll~Plll~l~ 194 (382)
T PF06728_consen 116 PNEKSSSPWLVAAFYLFNPLTILSCVALSTTVFTNLFILLSLYFAVKGNVFLSAISLALATYLSLYPILLLPPLLLLLY 194 (382)
T ss_pred chhcccchHHHHHHHHHCHHHHHHHHhcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 1356788999999999998774 4466777777788889889999999999999999999999998887765433
No 17
>TIGR03459 crt_membr carotene biosynthesis associated membrane protein. This model represents a family of hydrophobic and presumed membrane proteins. The genes encoding these proteins are syntenically associated with (found proximal to) genes of carotene biosynthesis ususally including phytoene synthase (crtB), phytoene dehydrogenase (crtI) and geranylgeranyl pyrophosphate synthase (ispA).
Probab=96.57 E-value=0.14 Score=51.81 Aligned_cols=128 Identities=12% Similarity=0.106 Sum_probs=92.0
Q ss_pred cccccccHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHhhchhhH
Q 020868 90 SYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASI 169 (320)
Q Consensus 90 ~~AFfPl~P~l~r~~~~~~~~~l~~~~~~~~~~~~a~~lvs~~~~~~a~~~ly~L~~~~~~~~~~a~~aall~~~~Pasi 169 (320)
.--+-|+.=.+-+.+....++.. ..-.+.--+++.+..++.++.+-||.++.-.+++. +..+...||--+
T Consensus 140 ~aPYGPl~l~i~~~v~~l~g~~i-------~~~v~~~Rl~~l~g~~l~~w~~~rLar~~g~~~~~---AlWL~~~NPLvi 209 (470)
T TIGR03459 140 TTPYGPLHLLVGQAITTVTGDNV-------TAGTLAFKLLSLPGLAVMVWAVPKLATHLGGNPTV---ALWLGVLNPLVV 209 (470)
T ss_pred CCCCChHHHHHHHHHHHHhCCCc-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH---HHHHHHcCchhh
Confidence 34455666555566665432211 01133444556666666677788888776555544 455667899998
Q ss_pred HHH--hhchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHH
Q 020868 170 FYT--SIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMHQ 227 (320)
Q Consensus 170 f~~--a~YtEslF~~l~~~~l~~~~~~~~~~a~~~~~la~~~RsnGil~~~~~~~~~l~~ 227 (320)
+.- ..-.|++...+...|+++..|+++..++++.+++..++.+.++..+|+.+..+.+
T Consensus 210 ihlvgg~HnealM~gl~l~gl~~~~r~~~~~g~vli~~a~~VK~~a~l~Lpf~~~~~~~~ 269 (470)
T TIGR03459 210 IHLIGGMHNEMLMVGLVSAGILLALKRRPVAGIALIAVAVALKATAGIALPFVVWIWVAH 269 (470)
T ss_pred hhhhcchhHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 554 5889999999999999999999999999999999999999999999988765544
No 18
>KOG3359 consensus Dolichyl-phosphate-mannose:protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.49 E-value=0.16 Score=53.65 Aligned_cols=199 Identities=16% Similarity=0.123 Sum_probs=128.3
Q ss_pred ccccHHHHHHHhhcCC--CccccccccccHHHHHHHHHHhhhcc--cc-cccchh---hhHHHHHHHHHHHHHHHHHHHH
Q 020868 70 IVWDSVYFVRIAQCGY--EYEQSYAFLPLLPAFTHLLSRSVLAP--LI-GVIGYR---AVLGLAGYIVSNVAFLFAAVYF 141 (320)
Q Consensus 70 ~~WDa~~f~~IA~~GY--~~e~~~AFfPl~P~l~r~~~~~~~~~--l~-~~~~~~---~~~~~a~~lvs~~~~~~a~~~l 141 (320)
.-||-.||-+-+..=- ++.++.- .|+-=+++...+.+.+-. .+ ...|.. ..-....-.+|..++.+.+.++
T Consensus 59 VVwDE~HfGkf~S~Yl~~~ff~DvH-PPlgKmL~al~g~L~GydG~f~f~~~g~~~~~~~~y~~mR~f~a~lgsl~vp~~ 137 (723)
T KOG3359|consen 59 VVWDEAHFGKFASYYLNNIFFFDVH-PPLGKMLIALVGYLAGYDGSFDFQSIGEYYPNGVPYVGMRLFSALLGSLTVPLA 137 (723)
T ss_pred EEEecccccchHHHHhcCceeeccC-chHHHHHHHHHHHHhCCCCCccccCCCccCCCCCchHhHHHHHHHHHhHHHHHH
Confidence 6799999977774211 1122222 667667776666554210 00 001101 1224667788888898999999
Q ss_pred HHHHHHHhCChhHHHHHHHHHhhchhhHHHH-hhchhHHHHHHHHHHHHHHHhh----------hHH----HHHHHHHHH
Q 020868 142 YRLSVMILKDPDAALCASLLFCFNPASIFYT-SIYSESLYALFSVGGLYYLMSG----------ALN----ISVLWLAIS 206 (320)
Q Consensus 142 y~L~~~~~~~~~~a~~aall~~~~Pasif~~-a~YtEslF~~l~~~~l~~~~~~----------~~~----~a~~~~~la 206 (320)
|...+....+...+.++++++++==+=+..+ -.--||+..++..++++.+.|- +|+ +.|+..+.|
T Consensus 138 y~t~~~~~~s~~aa~l~allv~~dns~~T~sr~ILLDs~Llff~~~~~y~~~r~~~~~~~pfs~~W~~wL~~tGvsLgca 217 (723)
T KOG3359|consen 138 YLTLKELGFSRLAAALAALLVLFDNSLVTLSRFILLDSMLLFFMAAAVYCFVRFYTQRKRPFSLRWWKWLLLTGVSLGCA 217 (723)
T ss_pred HHHHHHhcccHHHHHHHHHHHhhcccchhhhhHHHHhHHHHHHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhhhe
Confidence 9988888777777888888888776666665 5678999888888888877541 122 568888999
Q ss_pred HhhcchhhHHHHHHHHHHHHHHHHHHHhhhhHH-HHHHHHHHHHHhhHHhhhhHHHHhhhhhhhcc
Q 020868 207 GCARSNGVLNAGYFCFQTMHQAYDALFLKKRHF-LAMWILVCGALRCICIFAPFISFQVYGYFNMC 271 (320)
Q Consensus 207 ~~~RsnGil~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~l~~~iv~~P~~~~q~~~Y~~fC 271 (320)
..++=.|++..+.+...++.+++...-..+.++ ..+|+++.-+ ..+++.|+.++-..=|..|-
T Consensus 218 iSvK~vGlft~~~Vgl~~v~~LW~Ll~D~~~s~~~~~kh~~ar~--~~LI~iP~~iYl~~F~vHf~ 281 (723)
T KOG3359|consen 218 ISVKYVGLFTIALVGLYTVRELWCLLGDLGLSIKQIVKHLLARL--FFLIGIPFLIYLLFFYVHFS 281 (723)
T ss_pred eehhhhhHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH
Confidence 999999999988888877777654322222222 2244444332 35567798887555555554
No 19
>PF10131 PTPS_related: 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein; InterPro: IPR018776 This entry is found in various bacterial and archaeal hypothetical membrane proteins, as well as in tetratricopeptide TPR_2 repeat protein. Its function has not yet been established, though it shows similarity to 6-pyruvoyl-tetrahydropterin synthase.
Probab=96.43 E-value=0.42 Score=50.22 Aligned_cols=85 Identities=20% Similarity=0.274 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHhhchhhH---HHHhhchhHHHHHHH---HHHHHHHHh-h---
Q 020868 125 AGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASI---FYTSIYSESLYALFS---VGGLYYLMS-G--- 194 (320)
Q Consensus 125 a~~lvs~~~~~~a~~~ly~L~~~~~~~~~~a~~aall~~~~Pasi---f~~a~YtEslF~~l~---~~~l~~~~~-~--- 194 (320)
+-.++-.+++.++++.+|++.++..+ +..|.++++++.++|.-. +....++|.+...+. +++++...+ +
T Consensus 25 Ay~l~~~L~~~l~~~~~Y~~~R~~~~-~~~A~l~aiLyl~~py~l~~~y~rgni~e~lA~~llPlvll~~~~~~~~~~~r 103 (616)
T PF10131_consen 25 AYKLFIFLAFFLGGLGMYFLGRRLGR-RKAAILAAILYLFSPYHLRNIYWRGNIPETLAFALLPLVLLFLYRFIKKRKYR 103 (616)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc-hhHHHHHHHHHHHhHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCCch
Confidence 33444456667778889999998775 889999999999999765 334788999644333 344443332 2
Q ss_pred hHHHHHHHHHHHHhhc
Q 020868 195 ALNISVLWLAISGCAR 210 (320)
Q Consensus 195 ~~~~a~~~~~la~~~R 210 (320)
.+...++.+++..++.
T Consensus 104 ~~~~lAl~~all~lsH 119 (616)
T PF10131_consen 104 YWILLALSMALLALSH 119 (616)
T ss_pred hHHHHHHHHHHHHHHh
Confidence 2345677788888887
No 20
>PF11028 DUF2723: Protein of unknown function (DUF2723); InterPro: IPR021280 This family is conserved in bacteria. The function is not known.
Probab=96.40 E-value=0.33 Score=43.05 Aligned_cols=124 Identities=18% Similarity=0.220 Sum_probs=75.2
Q ss_pred ccccccccHHHHH---HHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------------h
Q 020868 89 QSYAFLPLLPAFT---HLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKD-------------P 152 (320)
Q Consensus 89 ~~~AFfPl~P~l~---r~~~~~~~~~l~~~~~~~~~~~~a~~lvs~~~~~~a~~~ly~L~~~~~~~-------------~ 152 (320)
-..+-.||||+.+ |.++.+ + ..+ ......=++|.+++.+++..+|....++.++ .
T Consensus 12 LgV~HPPGyPlf~llg~lf~~l---p---~~~---~ia~~vNl~Sal~sA~tv~~l~~~~~~l~~~~~~~~~~~~~~~~~ 82 (178)
T PF11028_consen 12 LGVPHPPGYPLFTLLGRLFSLL---P---DFG---NIAWRVNLLSALSSALTVLFLFWSITRLLRKLPEEPSTAQTIAIL 82 (178)
T ss_pred cCCCCCCCcHHHHHHHHHHHHc---C---Ccc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 3456678888765 332221 1 011 2234444678888888899999988887754 2
Q ss_pred hHHHHHHHHHhhchhhHHHHhhchh-----HHHHHHHHHHHHHHHhh-------hH-HHHHHHHHHHHhhcchhhHHHHH
Q 020868 153 DAALCASLLFCFNPASIFYTSIYSE-----SLYALFSVGGLYYLMSG-------AL-NISVLWLAISGCARSNGVLNAGY 219 (320)
Q Consensus 153 ~~a~~aall~~~~Pasif~~a~YtE-----slF~~l~~~~l~~~~~~-------~~-~~a~~~~~la~~~RsnGil~~~~ 219 (320)
..+..+++.+.++|.--+. +.=.| ++|..+.++.++..+++ |+ .+.+.+.|++....-..++..+.
T Consensus 83 ~a~lv~al~fafS~sfW~~-Av~aEVYal~~l~~al~~~l~l~w~~~~~~~~~~r~l~l~afl~GLs~g~H~~~ll~lP~ 161 (178)
T PF11028_consen 83 GAGLVGALAFAFSDSFWFQ-AVEAEVYALSSLFTALLLWLLLKWEREADEPRSDRWLLLIAFLCGLSLGVHLLNLLALPA 161 (178)
T ss_pred HHHHHHHHHHHhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567788999999876544 44444 23444444444444332 33 35667788888888777776665
Q ss_pred HHH
Q 020868 220 FCF 222 (320)
Q Consensus 220 ~~~ 222 (320)
+++
T Consensus 162 ~~~ 164 (178)
T PF11028_consen 162 IAL 164 (178)
T ss_pred HHH
Confidence 544
No 21
>COG1928 PMT1 Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.39 E-value=0.081 Score=55.59 Aligned_cols=190 Identities=14% Similarity=0.108 Sum_probs=118.4
Q ss_pred ccccHHHHHHHhhcC--CCccccccccccHHHHHHHHHHhhhcccccccchh---------hhHHHHHHHHHHHHHHHHH
Q 020868 70 IVWDSVYFVRIAQCG--YEYEQSYAFLPLLPAFTHLLSRSVLAPLIGVIGYR---------AVLGLAGYIVSNVAFLFAA 138 (320)
Q Consensus 70 ~~WDa~~f~~IA~~G--Y~~e~~~AFfPl~P~l~r~~~~~~~~~l~~~~~~~---------~~~~~a~~lvs~~~~~~a~ 138 (320)
.-||..||-+-|.+= .++.++. -.|+-=+++...+.+.+ ..+.++.. ..-....-.+|.+.+.+.+
T Consensus 48 VVfdE~hfgkFaS~Yl~~~~~fDv-HPPL~kml~al~~~L~g--~~g~f~f~~~g~~~~~~~~~y~~mR~f~A~lgsl~v 124 (699)
T COG1928 48 VVFDEAHFGKFASYYLNGTPFFDV-HPPLGKMLIALVGGLEG--YDPPFDFQLIGLTEYPFGYNYVGMRFFNALLGSLTV 124 (699)
T ss_pred EEEeeeeeccchHHhhcCCccccc-CCcHHHHHHHhhhhhhc--cCCCcccccCCcccccCCCChHHHHHHHHHHHhHHH
Confidence 679999998887531 1122222 34555555554444321 11111100 1124667788888888999
Q ss_pred HHHHHHHHHHhCChhHHHHHHHHHhhchhhHHHH-hhchhHHHHHHHHHHHHHHHh--------hhH----HHHHHHHHH
Q 020868 139 VYFYRLSVMILKDPDAALCASLLFCFNPASIFYT-SIYSESLYALFSVGGLYYLMS--------GAL----NISVLWLAI 205 (320)
Q Consensus 139 ~~ly~L~~~~~~~~~~a~~aall~~~~Pasif~~-a~YtEslF~~l~~~~l~~~~~--------~~~----~~a~~~~~l 205 (320)
.++|...++...+...+.+++++.++==+-+..+ -..-|++..++..++.|.+.+ ++| .+.|+..|.
T Consensus 125 pl~y~t~r~~~~s~l~~~l~~llv~~dn~~~t~sR~ILLDs~LlfF~~~~~y~~~r~~~~~p~s~~w~~~Ll~tGisLGc 204 (699)
T COG1928 125 PLVYLIARRIGYSRLVAALAGLLVAFDNSFVTESRFILLDSFLLFFIVAAAYCFLRFHRQQPFSRRWLKWLLLTGISLGC 204 (699)
T ss_pred HHHHHHHHHhcchHHHHHHHHHHHHhccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHHHHhcceeee
Confidence 9999999888777777888888888766666555 577788888887777776643 223 256788888
Q ss_pred HHhhcchhhHHHHHHHHHHHHHHHHHHHhhhhHH-HHHHHHHHHHHhhHHhhhhHHHHhh
Q 020868 206 SGCARSNGVLNAGYFCFQTMHQAYDALFLKKRHF-LAMWILVCGALRCICIFAPFISFQV 264 (320)
Q Consensus 206 a~~~RsnGil~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~l~~~iv~~P~~~~q~ 264 (320)
+..+|=+|++..+++...++.+.+.-...++.++ ..+|+++.-+ ..++..|+.++-.
T Consensus 205 aiS~KwvGlft~~~vgl~~v~~lW~ll~dk~~s~~~~~kh~~~r~--f~Li~iP~~iyl~ 262 (699)
T COG1928 205 AISVKWVGLFTTGVVGLLAVYELWSLLYDKSVSWKQIIKHWLARF--FGLIIIPFDIYLL 262 (699)
T ss_pred EEEeeehhHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHH--HHHHHHHHHHHHH
Confidence 8999999999888877776666553322232222 1244444333 3456678887543
No 22
>PLN02816 mannosyltransferase
Probab=96.35 E-value=1.2 Score=46.09 Aligned_cols=96 Identities=17% Similarity=0.225 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHhhchhhHHH-HhhchhHHHHHHHHHHHHHHH---------hhh
Q 020868 126 GYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFY-TSIYSESLYALFSVGGLYYLM---------SGA 195 (320)
Q Consensus 126 ~~lvs~~~~~~a~~~ly~L~~~~~~~~~~a~~aall~~~~Pasif~-~a~YtEslF~~l~~~~l~~~~---------~~~ 195 (320)
--++..+...++-..+|++.++.++ ++.|..+.++...++...++ +-.++.++-+.++..+++... ..+
T Consensus 121 pRl~~al~sal~D~~l~kl~~~~~g-~~~A~~~L~~sl~swf~~y~~sRTfSNslEt~Lt~lAL~~w~~~~~~~~~~~~~ 199 (546)
T PLN02816 121 PRLMQSIFSAIGDLYLYKLSDALYG-GNVATWSLFCQMANWFIFFCLNRTFSNCLETVLTIMGLYYWPCIRDSSIDYPVN 199 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC-chHHHHHHHHHHHHHHHHHhhCccchhHHHHHHHHHHHHHhhccccccccccch
Confidence 3334444455556788999888884 67777777777788888776 579999999999999998752 112
Q ss_pred HHHHHHHHHHHHhhcchhhHHHHHHHH
Q 020868 196 LNISVLWLAISGCARSNGVLNAGYFCF 222 (320)
Q Consensus 196 ~~~a~~~~~la~~~RsnGil~~~~~~~ 222 (320)
.-.+-.+.++++..||+.++...+++.
T Consensus 200 ~~~~L~la~la~~iRPt~ailwl~l~l 226 (546)
T PLN02816 200 RKWGLVIAALACAIRPTSAVIWLYVGM 226 (546)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 223345566888889988886665543
No 23
>PF04922 DIE2_ALG10: DIE2/ALG10 family; InterPro: IPR007006 Members of this entry are glycosyltransferases, belonging to the ALG10 family. The majority of the members are annotated as alpha-1,2 glucosyltransferas. The ALG10 protein from Saccharomyces cerevisiae (Baker's yeast) encodes the alpha-1,2 glucosyltransferase of the endoplasmic reticulum. This protein has been characterised in Rat as potassium channel regulator 1 [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane
Probab=95.44 E-value=0.82 Score=45.24 Aligned_cols=71 Identities=15% Similarity=0.194 Sum_probs=60.6
Q ss_pred hHHHHHHHHHhhchhhHHHH-hhchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcchhhHHHHHHHHH
Q 020868 153 DAALCASLLFCFNPASIFYT-SIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQ 223 (320)
Q Consensus 153 ~~a~~aall~~~~Pasif~~-a~YtEslF~~l~~~~l~~~~~~~~~~a~~~~~la~~~RsnGil~~~~~~~~ 223 (320)
+.+...++-.++.|.-.|++ .-||+...+.+.+++.+...+++...+++.+.+|.++|-|-|+.+++.+-.
T Consensus 91 ~~~~~~a~~ialfPllfFFsfLYYTDv~St~~VL~~yl~~~~~~~~~sal~g~~sv~fRQTNIvWv~f~~~~ 162 (379)
T PF04922_consen 91 RKAILSALNIALFPLLFFFSFLYYTDVWSTTFVLLMYLASLKRRHWLSALFGLLSVLFRQTNIVWVAFFAGG 162 (379)
T ss_pred HHHHHHHHHHHHhhHHHHhhHHHHhcHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 34556677888889988888 688999999998888887888888999999999999999999988877664
No 24
>KOG3893 consensus Mannosyltransferase [Carbohydrate transport and metabolism]
Probab=95.24 E-value=0.064 Score=51.53 Aligned_cols=92 Identities=16% Similarity=0.181 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHhCChhHHHHHHHHHhhchhhHHHH-hhchhHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 020868 128 IVSNVAFLFAAVYFYRLSV-MILKDPDAALCASLLFCFNPASIFYT-SIYSESLYALFSVGGLYYLMSGALNISVLWLAI 205 (320)
Q Consensus 128 lvs~~~~~~a~~~ly~L~~-~~~~~~~~a~~aall~~~~Pasif~~-a~YtEslF~~l~~~~l~~~~~~~~~~a~~~~~l 205 (320)
++=.++-++.+.++|||.. +-. +++.|+..+.++..||.....| -+-.||.-+++++..++++.|+++..||+.-|+
T Consensus 100 ~Lf~~~Dll~a~L~~kLl~~~~i-~~~~a~~~~~fWLlNPl~aiIStRGNaesi~~~lvi~~lyllqK~~v~~A~l~~Gl 178 (405)
T KOG3893|consen 100 LLFAIFDLLIATLIYKLLHMRSI-SRKQALIYASFWLLNPLTAIISTRGNAESIVAFLVILTLYLLQKSEVFLAGLAHGL 178 (405)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhc-chhhhhHhhhhhhcCchheeeecCCchHHHHHHHHHHHHHHHHHhHHHHHHHHhhh
Confidence 3344677788899999977 444 5788999999999999988776 599999999999999999999999999999999
Q ss_pred HHhhcchhhHHHHHH
Q 020868 206 SGCARSNGVLNAGYF 220 (320)
Q Consensus 206 a~~~RsnGil~~~~~ 220 (320)
+.-.|---+...+.+
T Consensus 179 aIh~KIYPliY~l~i 193 (405)
T KOG3893|consen 179 AIHLKIYPLIYSLAI 193 (405)
T ss_pred eeeeEechHHhhhhh
Confidence 998887666665543
No 25
>COG4346 Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=94.95 E-value=0.58 Score=45.54 Aligned_cols=84 Identities=19% Similarity=0.235 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHHHHHHhCChhHHHHHHHHHhhchhhHHHH-hhchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhc
Q 020868 132 VAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYT-SIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCAR 210 (320)
Q Consensus 132 ~~~~~a~~~ly~L~~~~~~~~~~a~~aall~~~~Pasif~~-a~YtEslF~~l~~~~l~~~~~~~~~~a~~~~~la~~~R 210 (320)
+.+.+..+++|..+++..++.-.+..|+++.++-|.-.-+. .+.-+-=-++++++.++++..+|...+++..++|..++
T Consensus 163 Ie~~liliiv~~~~~ki~~~~la~~~aA~~~alDp~l~amg~VAMLDIhvaFFtaL~~~fl~~~R~l~sgiAlGLAAs~K 242 (438)
T COG4346 163 IEGALILIIVYFVAYKIARSPLAGLIAALLAALDPLLRAMGGVAMLDIHVAFFTALFMYFLANDRPLWSGIALGLAASVK 242 (438)
T ss_pred HhhhHHHHHHHHHHHHHhcCchHHHHHHHHHhhCcHHHHhcchhHHHHHHHHHHHHHHHHHhcCCeehHHHHHHHHHHHh
Confidence 44444556666667777767777888888888888776665 57777777888899999999999999999999999999
Q ss_pred chhhH
Q 020868 211 SNGVL 215 (320)
Q Consensus 211 snGil 215 (320)
-.|-+
T Consensus 243 ~SG~~ 247 (438)
T COG4346 243 LSGAF 247 (438)
T ss_pred hcccc
Confidence 88866
No 26
>COG5305 Predicted membrane protein [Function unknown]
Probab=94.71 E-value=2.7 Score=43.62 Aligned_cols=81 Identities=22% Similarity=0.239 Sum_probs=65.8
Q ss_pred cccccccHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHhhchhhH
Q 020868 90 SYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASI 169 (320)
Q Consensus 90 ~~AFfPl~P~l~r~~~~~~~~~l~~~~~~~~~~~~a~~lvs~~~~~~a~~~ly~L~~~~~~~~~~a~~aall~~~~Pasi 169 (320)
.-..-|+|..+++.-+..+. ...++.-..|.++++++..++|.+++..+ +++.+..|+.+++++|..+
T Consensus 94 ~~~~~PLYfll~h~W~~lF~-----------~s~~~~Rsls~L~~~~ai~~~y~l~r~l~-~~~~a~la~~~~AisP~~i 161 (552)
T COG5305 94 LLVHPPLYFLLAHFWMALFG-----------NSLLASRSLSALLSALAIPLVYWLGRELF-GSTTALLAAALMAISPFHI 161 (552)
T ss_pred cCCCCCeeehHHHHHHHHhc-----------hHHHHHHhHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHccChHHH
Confidence 45667899999999988753 23577888899999999999999999999 5788889999999999999
Q ss_pred HHH---hhchhHHHHH
Q 020868 170 FYT---SIYSESLYAL 182 (320)
Q Consensus 170 f~~---a~YtEslF~~ 182 (320)
+.+ -.|+=+.-..
T Consensus 162 ~~~qe~R~y~L~~~~~ 177 (552)
T COG5305 162 FYSQEARSYALAVATT 177 (552)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 886 2565544433
No 27
>COG3463 Predicted membrane protein [Function unknown]
Probab=94.38 E-value=0.67 Score=46.29 Aligned_cols=95 Identities=16% Similarity=0.217 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHhhchhhH--HHHhhchhHHHHHHHHHHHHHHHhhhHHHHHH
Q 020868 124 LAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASI--FYTSIYSESLYALFSVGGLYYLMSGALNISVL 201 (320)
Q Consensus 124 ~a~~lvs~~~~~~a~~~ly~L~~~~~~~~~~a~~aall~~~~Pasi--f~~a~YtEslF~~l~~~~l~~~~~~~~~~a~~ 201 (320)
..-+++..++-..++..+|+++++.+.+++.|..-++++.+||.-. -.----+|+++..+.+++.+++.|++|-+.-+
T Consensus 88 ~~Lll~Q~i~ials~~p~y~lA~eil~~E~~al~isilYll~p~i~gi~~FDFH~m~~avp~~~~a~~f~~r~k~~l~li 167 (458)
T COG3463 88 ETLLLIQAIAIALSSLPIYLLAKEILNGEKEALAISILYLLNPYIEGINLFDFHPMAFAVPLFLLAYYFLKRKKWKLFLI 167 (458)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhcccHHHHHHHHHHHhchhccCchhhhcchHHHHHHHHHHHHHHHHhcchhHHHH
Confidence 4455677777888999999999999988999999999999999753 22235689999999999999999999988888
Q ss_pred HHHHHHhhcchhhHHHH
Q 020868 202 WLAISGCARSNGVLNAG 218 (320)
Q Consensus 202 ~~~la~~~RsnGil~~~ 218 (320)
...+.-++.+...+.++
T Consensus 168 ~lvlIl~tk~~a~liiI 184 (458)
T COG3463 168 FLVLILLTKEDAFLIII 184 (458)
T ss_pred HHHHHHHHhcccHHHHH
Confidence 88888888888555544
No 28
>PF03155 Alg6_Alg8: ALG6, ALG8 glycosyltransferase family; InterPro: IPR004856 N-linked (asparagine-linked) glycosylation of proteins is mediated by a highly conserved pathway in eukaryotes, in which a lipid (dolichol phosphate)-linked oligosaccharide is assembled at the endoplasmic reticulum membrane prior to the transfer of the oligosaccharide moiety to the target asparagine residues. This oligosaccharide is composed of Glc(3)Man(9)GlcNAc(2). The addition of the three glucose residues is the final series of steps in the synthesis of the oligosaccharide precursor. Alg6 transfers the first glucose residue, and Alg8 transfers the second one []. In the human alg6 gene, a C-T transition, which causes Ala333 to be replaced with Val, has been identified as the cause of a congenital disorder of glycosylation, designated as type Ic OMIM:603147 []. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0005789 endoplasmic reticulum membrane
Probab=93.11 E-value=2.6 Score=42.94 Aligned_cols=106 Identities=16% Similarity=0.200 Sum_probs=72.1
Q ss_pred ChhHHHHHHHHHhhchhhHHHH---hhchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHH
Q 020868 151 DPDAALCASLLFCFNPASIFYT---SIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMHQ 227 (320)
Q Consensus 151 ~~~~a~~aall~~~~Pasif~~---a~YtEslF~~l~~~~l~~~~~~~~~~a~~~~~la~~~RsnGil~~~~~~~~~l~~ 227 (320)
+++....+.++..++|+-+..- --|.--++.++ ++++....+++.+.++++|+++-..+-..+-.++.+....++.
T Consensus 131 ~~~~~~~~~~~~l~~PgLilIDH~HFQYN~~~lGl~-l~si~~~~~~~~l~~a~~F~~~Ln~Kqm~LY~Ap~~f~yLL~~ 209 (469)
T PF03155_consen 131 SSKQRFIALLLILLNPGLILIDHGHFQYNGFLLGLL-LLSIAALIRGRYLLGAILFSLLLNFKQMFLYYAPAFFVYLLGS 209 (469)
T ss_pred chhHHHHHHHHHHHCchHHhhhhhhhhHHHHHHHHH-HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455667778888999987442 46776666554 6778888899999999999999999999999998777777765
Q ss_pred HHHHHHhhhh---HH-HHHHHHHHHHHhhHHhhhhHHH
Q 020868 228 AYDALFLKKR---HF-LAMWILVCGALRCICIFAPFIS 261 (320)
Q Consensus 228 ~~~~~~~~~~---~~-~~~~~~~~~~l~~~iv~~P~~~ 261 (320)
.. ++++ .. +..+.-+..+...+++..||..
T Consensus 210 c~----~~~~~~~~~~~~~~lg~~Vi~~f~~~~~PF~~ 243 (469)
T PF03155_consen 210 CF----QRKSFRFSIKRLIKLGIVVIATFALSFGPFLY 243 (469)
T ss_pred Hc----CCCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 2221 11 1122222334446677788874
No 29
>PF05208 ALG3: ALG3 protein; InterPro: IPR007873 The formation of N-glycosidic linkages of glycoproteins involves the ordered assembly of the common Glc3Man9GlcNAc2 core-oligosaccharide on the lipid carrier dolichyl pyrophosphate. Whereas early mannosylation steps occur on the cytoplasmic side of the endoplasmic reticulum with GDP-Man as donor, the final reactions from Man5GlcNAc2-PP-Dol to Man9GlcNAc2-PP-Dol on the lumenal side use Dol-P-Man []. The ALG3 gene encodes the Dol-P-Man:Man5GlcNAc2-PP-Dol mannosyltransferase.; GO: 0016758 transferase activity, transferring hexosyl groups, 0005783 endoplasmic reticulum, 0016021 integral to membrane
Probab=90.54 E-value=2.7 Score=41.38 Aligned_cols=107 Identities=17% Similarity=0.311 Sum_probs=73.7
Q ss_pred HHHHHHhhc--hhhHHHHhhchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHh
Q 020868 157 CASLLFCFN--PASIFYTSIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMHQAYDALFL 234 (320)
Q Consensus 157 ~aall~~~~--Pasif~~a~YtEslF~~l~~~~l~~~~~~~~~~a~~~~~la~~~RsnGil~~~~~~~~~l~~~~~~~~~ 234 (320)
....+.+++ ==|||.--...+..-+++...++++..++||.++++++++|...+-|.++.++.++.-.+..
T Consensus 108 ~~~~ll~lSkRlHSI~vLRlFND~~a~~~~~~ai~~~~~~~w~~g~~~yS~avSIKMN~LL~~Pall~~~l~~------- 180 (368)
T PF05208_consen 108 WLLILLCLSKRLHSIFVLRLFNDCFAMLFLYAAILLFQRRRWLLGSLLYSLAVSIKMNALLFAPALLVLLLQS------- 180 (368)
T ss_pred hHHHHHHHHHHHHHhhhhheecHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHc-------
Confidence 344444544 23566666778999999988999999999999999999999999999999988775543321
Q ss_pred hhhHHHHHHHHHHHHHhhHHhhhhHHHHhhhhhhhcc
Q 020868 235 KKRHFLAMWILVCGALRCICIFAPFISFQVYGYFNMC 271 (320)
Q Consensus 235 ~~~~~~~~~~~~~~~l~~~iv~~P~~~~q~~~Y~~fC 271 (320)
....+.+..+..+.+.=+++..||...+-.+|..--
T Consensus 181 -~g~~~~~~~l~v~~~vQvllg~PFL~~~p~~Yl~~A 216 (368)
T PF05208_consen 181 -LGLLKTLWYLAVCALVQVLLGLPFLLTNPWSYLSRA 216 (368)
T ss_pred -CCHHHHHHHHHHHHHHHHHHhhHHHHhCHHHHHHHh
Confidence 111122333333333345678899997666776544
No 30
>KOG2762 consensus Mannosyltransferase [Carbohydrate transport and metabolism]
Probab=89.42 E-value=1.8 Score=42.28 Aligned_cols=109 Identities=14% Similarity=0.241 Sum_probs=75.9
Q ss_pred hHHHHHHHHHhhc--hhhHHHHhhchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHH
Q 020868 153 DAALCASLLFCFN--PASIFYTSIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMHQAYD 230 (320)
Q Consensus 153 ~~a~~aall~~~~--Pasif~~a~YtEslF~~l~~~~l~~~~~~~~~~a~~~~~la~~~RsnGil~~~~~~~~~l~~~~~ 230 (320)
+.......+.|++ -=|||.--...+++.+++...++....++||.++++.+++|..++-|.++.++.+++..+.+.
T Consensus 132 ~vPp~vlvL~~lskRiHSIfVLRLFND~fa~lll~~~i~~~l~qkw~~gs~~fSlAvSVKMNvLLyaPall~~lL~~~-- 209 (429)
T KOG2762|consen 132 RVPPWVLVLLCLSKRIHSIFVLRLFNDPFAMLLLYVAILLFLKQKWLVGSIFFSLAVSVKMNVLLYAPALLLLLLQNL-- 209 (429)
T ss_pred cCChHHHHHHHHHHHHHHhhhhHHhcchHHHHHHHHHHHHHHHHHHHhHhhhheeehhhhhhhHHHHHHHHHHHHHhc--
Confidence 3444455555555 235566667889999999999998888999999999999999999999999988777544332
Q ss_pred HHHhhhhHHHHHHHHHHHHHhhHHhhhhHHHHhhhhhhh
Q 020868 231 ALFLKKRHFLAMWILVCGALRCICIFAPFISFQVYGYFN 269 (320)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~l~~~iv~~P~~~~q~~~Y~~ 269 (320)
...+.+..+..+++.=+.+.+||.+..--+|.+
T Consensus 210 ------~~~~tl~~L~v~~~vQilvg~PFLl~~p~~Yl~ 242 (429)
T KOG2762|consen 210 ------GPIGTLLHLAVCILVQILVGLPFLLYFPSSYLT 242 (429)
T ss_pred ------cHHHHHHHHHHHHHHHHHHcCchHhhChHHHHh
Confidence 111223344444444566888999865445543
No 31
>PF05007 Mannosyl_trans: Mannosyltransferase (PIG-M); InterPro: IPR007704 PIG-M has a DXD motif. The DXD motif is found in many glycosyltransferases that utilise nucleotide sugars. It is thought that the motif is involved in the binding of a manganese ion that is required for association of the enzymes with nucleotide sugar substrates [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=88.81 E-value=2.3 Score=39.93 Aligned_cols=50 Identities=18% Similarity=0.238 Sum_probs=43.8
Q ss_pred hchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcchhhHHHHHHHHH
Q 020868 174 IYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQ 223 (320)
Q Consensus 174 ~YtEslF~~l~~~~l~~~~~~~~~~a~~~~~la~~~RsnGil~~~~~~~~ 223 (320)
+=+||+-.++.++.++++.++++..||++.|+|.-.|-=-+..++.+...
T Consensus 5 GnaEsl~~~lVl~~l~~l~~~~~~~Aa~~lGlaVHfKIYPiIY~~~~~l~ 54 (259)
T PF05007_consen 5 GNAESLLCFLVLLTLYFLLKGRWFLAAILLGLAVHFKIYPIIYALPILLY 54 (259)
T ss_pred cchHHHHHHHHHHHHHHHHcCChhHHHHHhhHHHHhhhccHHHHHHHHHH
Confidence 45799999999999999999999999999999999997777777665554
No 32
>KOG2576 consensus Glucosyltransferase - Alg8p [Transcription]
Probab=86.73 E-value=4.9 Score=40.02 Aligned_cols=101 Identities=15% Similarity=0.237 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHhhchhhHHH---HhhchhHHHHHHHHHHHHHHHhhhHHHHHH
Q 020868 125 AGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFY---TSIYSESLYALFSVGGLYYLMSGALNISVL 201 (320)
Q Consensus 125 a~~lvs~~~~~~a~~~ly~L~~~~~~~~~~a~~aall~~~~Pasif~---~a~YtEslF~~l~~~~l~~~~~~~~~~a~~ 201 (320)
-.++++-++.+.++--.|++++++-++++..+..+.+...+|+-++. .--|.--||..+ ++.+..+.++|.++++.
T Consensus 103 ~SVIf~dll~~~~~rr~~~l~~kl~k~~~~~~~~a~ll~~s~gLlIvDhIHFQYNgfLfgil-LlSI~~l~~kr~l~~A~ 181 (500)
T KOG2576|consen 103 FSVIFSDLLLLYGLRRSYRLTSKLGKDQKQRFACAVLLLLSPGLLIVDHIHFQYNGFLFGIL-LLSIVFLKTKRYLLSAF 181 (500)
T ss_pred ehhHHHHHHHHHHHhhhhcccccCCcccccchHHHHHHHhCCCcEEEEEeeeecccHHHHHH-HHHHHHHhhhhHHHHHH
Confidence 35566666666655568899988887888888889999999998744 347888888877 55666677889999999
Q ss_pred HHHHHHhhcchhhHHHHHHHHHHHH
Q 020868 202 WLAISGCARSNGVLNAGYFCFQTMH 226 (320)
Q Consensus 202 ~~~la~~~RsnGil~~~~~~~~~l~ 226 (320)
.++..-..+-.=+-.+..+....++
T Consensus 182 ~fsvll~FKHIflY~ApaY~vylLr 206 (500)
T KOG2576|consen 182 LFSVLLNFKHIFLYVAPAYFVYLLR 206 (500)
T ss_pred HHHHHHhhhhheeeechhHHHHHHH
Confidence 9988877776655555544444554
No 33
>COG5650 Predicted integral membrane protein [Function unknown]
Probab=81.99 E-value=2.4 Score=43.46 Aligned_cols=106 Identities=13% Similarity=0.174 Sum_probs=66.1
Q ss_pred HHHHHHhhchhhHHHHhhchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHhhh
Q 020868 157 CASLLFCFNPASIFYTSIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMHQAYDALFLKK 236 (320)
Q Consensus 157 ~aall~~~~Pasif~~a~YtEslF~~l~~~~l~~~~~~~~~~a~~~~~la~~~RsnGil~~~~~~~~~l~~~~~~~~~~~ 236 (320)
+.+.+.+.+|--.|....=.+.+-+++..+++.. |+|..+||+++|+++..+..-..+.+++++...+ ++
T Consensus 199 ~~valv~as~~v~f~v~~~~DtI~~ffla~a~v~--r~rP~lAGvl~Gls~a~K~~P~Ivl~pll~~~~k--------ey 268 (536)
T COG5650 199 LDVALVAASPLVGFAVFTVFDTIWAFFLAAALVC--RGRPKLAGVLIGLSSAFKQIPLIVLPPLLYLIYK--------EY 268 (536)
T ss_pred eeeeeeeccceEEEEEecchhHHHHHHHHHHHHh--cCCchHHHHHHHHHHHhhcCchhhHHHHHHHHHH--------hc
Confidence 3444555556111222333566666666666665 8999999999999999999888877777663322 22
Q ss_pred hHHHHHHHHHHHHHhhHHhhhhHHHHhhhhhhhccc
Q 020868 237 RHFLAMWILVCGALRCICIFAPFISFQVYGYFNMCL 272 (320)
Q Consensus 237 ~~~~~~~~~~~~~l~~~iv~~P~~~~q~~~Y~~fC~ 272 (320)
+.....+.+..+.+...++=+||.+..=.+|.++.-
T Consensus 269 g~~~a~~f~~~aa~t~lLvN~PfiI~~P~aw~~sil 304 (536)
T COG5650 269 GLRPAIKFIATAAITWLLVNLPFIILGPRAWVESIL 304 (536)
T ss_pred CcchHHHHHHHHHHHHHHHcCceEEechHHHHHHHH
Confidence 111223344445556677778888755556666664
No 34
>PF09586 YfhO: Bacterial membrane protein YfhO; InterPro: IPR018580 The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system []. Some members of this family have been annotated as putative ABC transporter permease proteins.
Probab=81.46 E-value=83 Score=33.97 Aligned_cols=85 Identities=21% Similarity=0.293 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCh--hHHHHHHHHHhhchhhHHHH--hhchhHH-HHHHHHHHHHHHHh-hhHH
Q 020868 124 LAGYIVSNVAFLFAAVYFYRLSVMILKDP--DAALCASLLFCFNPASIFYT--SIYSESL-YALFSVGGLYYLMS-GALN 197 (320)
Q Consensus 124 ~a~~lvs~~~~~~a~~~ly~L~~~~~~~~--~~a~~aall~~~~Pasif~~--a~YtEsl-F~~l~~~~l~~~~~-~~~~ 197 (320)
.+-.++..+-..++.+..|.+.++..+++ ..+..++++|+++=-.+... ....+.+ +.-|.++|+.-+.+ ++++
T Consensus 90 ~~~~~~~~lk~~lag~~~~~~l~~~~~~~~~~~~~i~s~~Yafsg~~~~~~~~~~fld~~i~lPL~llgie~~~~~~k~~ 169 (843)
T PF09586_consen 90 YAILLLIILKIGLAGLFFYLYLRKFKKSRSDWAALIGSLLYAFSGYVIYYSFNIMFLDAMILLPLLLLGIERLLKEKKWW 169 (843)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 44444555556677788888888888766 88899999999885555432 2223322 33445666654443 4443
Q ss_pred HHHHHHHHHHh
Q 020868 198 ISVLWLAISGC 208 (320)
Q Consensus 198 ~a~~~~~la~~ 208 (320)
+-.+..+++..
T Consensus 170 ~~~~~~~l~~i 180 (843)
T PF09586_consen 170 LFIISLALALI 180 (843)
T ss_pred hhHHHHHHHHH
Confidence 33344444443
No 35
>PF14897 EpsG: EpsG family
Probab=81.14 E-value=47 Score=30.87 Aligned_cols=130 Identities=18% Similarity=0.164 Sum_probs=69.9
Q ss_pred cHHHHHHHhhcCCCccc---cccccccHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 020868 73 DSVYFVRIAQCGYEYEQ---SYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMIL 149 (320)
Q Consensus 73 Da~~f~~IA~~GY~~e~---~~AFfPl~P~l~r~~~~~~~~~l~~~~~~~~~~~~a~~lvs~~~~~~a~~~ly~L~~~~~ 149 (320)
|-..|.+.-++.-..+. +..+=|++..+...+..... + ...--.+.+ .+....++..-++..
T Consensus 24 D~~~Y~~~y~~~~~~~~~~~~~~~E~~~~~l~~~~~~~~~---------~--~~~~~~i~~----~i~~~~~~~~i~~~~ 88 (330)
T PF14897_consen 24 DYYNYYEIYDEISNNSFNFSEYGFEPGFYLLNYLFSYFGF---------N--YQFFFFIIS----FISLFLFFFFIKKYS 88 (330)
T ss_pred cHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHHCC---------C--HHHHHHHHH----HHHHHHHHHhHHHcc
Confidence 55566665544332221 15566788888887776421 1 111111122 222333444444433
Q ss_pred CChhHHHHHHHHHhhchhhHHHH-hhchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcchhhHHHHH
Q 020868 150 KDPDAALCASLLFCFNPASIFYT-SIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGY 219 (320)
Q Consensus 150 ~~~~~a~~aall~~~~Pasif~~-a~YtEslF~~l~~~~l~~~~~~~~~~a~~~~~la~~~RsnGil~~~~ 219 (320)
+ ......+.+++ +.+.....+ ...=.++...+.+.|+....+|++..+.++..+|++..+.+++..+.
T Consensus 89 ~-~~~~~~~~~l~-~~~~~~~~~~~~iRq~~A~~~~~~a~~~~~~~k~~~~~~~~lla~~fH~Saii~l~~ 157 (330)
T PF14897_consen 89 K-NYPIFLSLFLF-FSFFFFFYSFNQIRQSLAISFFLLALSYLYKKKWIKFILLVLLAILFHYSAIIFLPL 157 (330)
T ss_pred c-chHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 22122333333 222222222 34456666666677777777888888888899999999988776655
No 36
>PHA02898 virion envelope protein; Provisional
Probab=76.64 E-value=9.1 Score=30.00 Aligned_cols=66 Identities=21% Similarity=0.256 Sum_probs=33.3
Q ss_pred hcchhhHHHHHHHHHHHH-HHHHHHHhhhhH-HHHHHHH-HHHHHhhHHhhhhHHHHhhhhhhhcccCCcC
Q 020868 209 ARSNGVLNAGYFCFQTMH-QAYDALFLKKRH-FLAMWIL-VCGALRCICIFAPFISFQVYGYFNMCLGRSP 276 (320)
Q Consensus 209 ~RsnGil~~~~~~~~~l~-~~~~~~~~~~~~-~~~~~~~-~~~~l~~~iv~~P~~~~q~~~Y~~fC~~~~~ 276 (320)
.|++|++.+|.++..+-. .++-+..+.+.+ -..||.+ +.+++.++++++..++| -+|.+||.....
T Consensus 9 N~~s~vli~GIiLL~~ACIfAfidfSK~~~~~~~~wRalSii~FIlgivl~lG~~if--s~y~r~C~~~~~ 77 (92)
T PHA02898 9 NRPSYVVAFGIILLIVACICAYIELSKSEKPADSALRSISIISFILAIILILGIIFF--KGYNMFCGGNTT 77 (92)
T ss_pred cCcchHHHHHHHHHHHHHHHheehhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHH--HHHhhhcCCCcc
Confidence 467777777655443222 222222222222 1123222 33555566666666553 689999986543
No 37
>KOG2642 consensus Alpha-1,2 glucosyltransferase/transcriptional activator [Posttranslational modification, protein turnover, chaperones; Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=73.87 E-value=38 Score=33.43 Aligned_cols=67 Identities=15% Similarity=0.157 Sum_probs=55.3
Q ss_pred HHHhhchhhHHHH-hhchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcchhhHHHHHHHHHHHH
Q 020868 160 LLFCFNPASIFYT-SIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMH 226 (320)
Q Consensus 160 ll~~~~Pasif~~-a~YtEslF~~l~~~~l~~~~~~~~~~a~~~~~la~~~RsnGil~~~~~~~~~l~ 226 (320)
.-....|.-++++ .-|||..-+.+.+.+......|..+.++.+++.+.++|.+-+..+++.+...+.
T Consensus 119 ~tl~slP~l~~fsfLfYTD~~St~~vllay~f~~~~n~~~SAfl~~~s~lfRQTNIIWa~fia~~viA 186 (446)
T KOG2642|consen 119 STLGSLPILIFFSFLFYTDLGSTFFVLLAYLFCLYGNHKTSAFLGFCSFLFRQTNIIWAVFIAGNVIA 186 (446)
T ss_pred hHHhhccHHHHHHHHHHHhHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHhccchHHHHHHHHHHHH
Confidence 3334455555555 799999999999999888889999999999999999999999999998865543
No 38
>COG5617 Predicted integral membrane protein [Function unknown]
Probab=72.46 E-value=1.5e+02 Score=32.21 Aligned_cols=131 Identities=18% Similarity=0.208 Sum_probs=74.8
Q ss_pred ccccHHHHHHHhhcCCCccccccccccHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 020868 70 IVWDSVYFVRIAQCGYEYEQSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMIL 149 (320)
Q Consensus 70 ~~WDa~~f~~IA~~GY~~e~~~AFfPl~P~l~r~~~~~~~~~l~~~~~~~~~~~~a~~lvs~~~~~~a~~~ly~L~~~~~ 149 (320)
..|+-.|| +||+ -.-|+|=+|.++-++...+. |... .... +.+. +++ ...+..|.+.+...
T Consensus 54 ~~w~~~WY-----~G~p---flrYypPl~Yli~aal~~l~-------~d~~-~t~~-v~~~-la~-llG~~~~~~~r~~g 114 (801)
T COG5617 54 PPWCEYWY-----NGYP---FLRYYPPLSYLIGAALNFLL-------GDVV-TTYA-VFLM-LAF-LLGAGGWLLWRLRG 114 (801)
T ss_pred CCcchhhh-----cCCC---cceecCcHHHHHHHHHHHhh-------cChh-HHHH-HHHH-HHH-HHHHHHHHHHHhhc
Confidence 67888887 5774 35677778887776655432 2111 1111 1122 222 22333444444444
Q ss_pred CChhHHHHHHHHHhhchhhHHHHhhchhHHH--------HHHHHHHHHHHHh-hh----HHHHHHHHHHHHhhcchhhHH
Q 020868 150 KDPDAALCASLLFCFNPASIFYTSIYSESLY--------ALFSVGGLYYLMS-GA----LNISVLWLAISGCARSNGVLN 216 (320)
Q Consensus 150 ~~~~~a~~aall~~~~Pasif~~a~YtEslF--------~~l~~~~l~~~~~-~~----~~~a~~~~~la~~~RsnGil~ 216 (320)
.....|.++++++.++|-.+ ...++|.-+ ..+.+..++...+ ++ ....++...++++|.+.|-..
T Consensus 115 ~t~~ia~I~alL~ltsp~~l--~vlf~EGniP~v~~i~f~pl~l~~l~~~~~~Gkk~r~~l~~allmslv~~tH~m~~~~ 192 (801)
T COG5617 115 RTGFIALISALLWLTSPENL--KVLFIEGNIPRVLAIGFGPLALGLLERFLERGKKERSLLRMALLMSLVLLTHPMGGAL 192 (801)
T ss_pred cccchHHHHHHHHHhChhhe--EEEEecCcccHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46778999999999999864 456666532 2222333333332 22 234567789999999888777
Q ss_pred HHHHH
Q 020868 217 AGYFC 221 (320)
Q Consensus 217 ~~~~~ 221 (320)
.+-..
T Consensus 193 ~g~a~ 197 (801)
T COG5617 193 SGGAL 197 (801)
T ss_pred HHHHH
Confidence 65433
No 39
>PHA03048 IMV membrane protein; Provisional
Probab=69.77 E-value=20 Score=28.18 Aligned_cols=64 Identities=11% Similarity=0.002 Sum_probs=31.0
Q ss_pred hcchhhHHHHHHHHHHHH-HHHHHHHhhhhHHHHHHHH-HHHHHhhHHhhhhHHHHhhhhhhhcccCC
Q 020868 209 ARSNGVLNAGYFCFQTMH-QAYDALFLKKRHFLAMWIL-VCGALRCICIFAPFISFQVYGYFNMCLGR 274 (320)
Q Consensus 209 ~RsnGil~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~-~~~~l~~~iv~~P~~~~q~~~Y~~fC~~~ 274 (320)
.|.+|++.+|.++..+-. .++-+..+.+..-..||.+ +.+++.++++++...+ |-+|.+||.+.
T Consensus 9 ny~S~vli~GIiLL~~aCIfAfidfsK~k~~~~~wRalsii~FIlgivl~lG~~i--fsmy~r~C~~~ 74 (93)
T PHA03048 9 NYFSTALIGGIILLAASCIFAFVDFSKNKATVTVWRALSGIAFVLGIVMTIGMLI--YSMWGRYCTPS 74 (93)
T ss_pred cccchHHHHHHHHHHHHHHHhhhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHH--HHHHhcccCCC
Confidence 356666666654443221 1222222222221223222 3355556666666555 36899999864
No 40
>PRK13375 pimE mannosyltransferase; Provisional
Probab=63.16 E-value=1.7e+02 Score=29.39 Aligned_cols=29 Identities=14% Similarity=0.185 Sum_probs=23.2
Q ss_pred HHhhhHHHHHHHHHHHHhhcchhhHHHHH
Q 020868 191 LMSGALNISVLWLAISGCARSNGVLNAGY 219 (320)
Q Consensus 191 ~~~~~~~~a~~~~~la~~~RsnGil~~~~ 219 (320)
+.++|++.+|++.|+++..+.+-.++..+
T Consensus 167 ll~~r~~~aGvliGLAaaIKlTPavf~l~ 195 (409)
T PRK13375 167 VYSSRWWLSGLLVGLAAGVKLTPAITGLY 195 (409)
T ss_pred HhcCCccHHHHHHHHHHHhhhhhHHHHHH
Confidence 44778889999999999999987664433
No 41
>PF09913 DUF2142: Predicted membrane protein (DUF2142); InterPro: IPR018674 This family of conserved hypothetical proteins has no known function.
Probab=53.50 E-value=2.2e+02 Score=27.59 Aligned_cols=90 Identities=9% Similarity=0.074 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHhhchhhHHHHh-hchhHHHHHHHHHHHHHHHh-------
Q 020868 122 LGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYTS-IYSESLYALFSVGGLYYLMS------- 193 (320)
Q Consensus 122 ~~~a~~lvs~~~~~~a~~~ly~L~~~~~~~~~~a~~aall~~~~Pasif~~a-~YtEslF~~l~~~~l~~~~~------- 193 (320)
....|-++|.++..+.+....|+.. ..| ...++.++.|.+++..+ .-.+++...++++.+..+.+
T Consensus 120 ~~~l~Rl~nll~~~~l~~~Ai~~~p----~~k---~l~~~i~l~Pm~~~~~aS~s~D~~~~~~~~l~~a~~l~~~~~~~~ 192 (389)
T PF09913_consen 120 MYYLGRLFNLLLYALLVYLAIKLAP----RGK---WLLALIALLPMTLFQAASVSYDGLIIALAFLFIALLLRLYRKKKI 192 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcc----hhH---HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 4678899998888776665555442 112 34667778899998875 44566665555544433322
Q ss_pred --hhHHHHHHHHHHHHhhcchhhHHHH
Q 020868 194 --GALNISVLWLAISGCARSNGVLNAG 218 (320)
Q Consensus 194 --~~~~~a~~~~~la~~~RsnGil~~~ 218 (320)
+.....++..++.+.+|.+=++++.
T Consensus 193 ~~~~~~~l~v~~~ll~~~K~~y~~l~~ 219 (389)
T PF09913_consen 193 TRRDLILLGVLAVLLALSKPPYIPLLL 219 (389)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1235667788888999955554443
No 42
>KOG2575 consensus Glucosyltransferase - Alg6p [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=44.82 E-value=3.5e+02 Score=27.46 Aligned_cols=101 Identities=14% Similarity=0.141 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-Hh-CChhHHHHHHHHHhhchhhHHHH---hhchhHHHHHHHHHHHHHHHhhhHH
Q 020868 123 GLAGYIVSNVAFLFAAVYFYRLSVM-IL-KDPDAALCASLLFCFNPASIFYT---SIYSESLYALFSVGGLYYLMSGALN 197 (320)
Q Consensus 123 ~~a~~lvs~~~~~~a~~~ly~L~~~-~~-~~~~~a~~aall~~~~Pasif~~---a~YtEslF~~l~~~~l~~~~~~~~~ 197 (320)
--+.++++-+...+-+++.|-.... .. ++.+.+. +.+-.++|+-+..- --|. +...-+++.+...+.+++..
T Consensus 138 MR~TViisd~liy~Pa~ify~~~~~r~~~~~~~~a~--~~~iLl~P~L~LID~GHFQYN-sisLGl~~~ai~~ll~~~~~ 214 (510)
T KOG2575|consen 138 MRSTVIISDLLIYLPALIFYFKWLHRTRSKKSKIAY--AALILLYPSLLLIDHGHFQYN-SISLGLTLYAIAALLKNFYV 214 (510)
T ss_pred HHHHHHHHhHHHHhhHHHHHHHHhhhccCcccHHHH--HHHHHhCCceEEEecCcceec-hhHHHHHHHHHHHHHHhHHH
Confidence 4556677777777777777765442 22 1233333 45566788866432 2342 44445566777778889999
Q ss_pred HHHHHHHHHHhhcchhhHHHHHHHHHHHH
Q 020868 198 ISVLWLAISGCARSNGVLNAGYFCFQTMH 226 (320)
Q Consensus 198 ~a~~~~~la~~~RsnGil~~~~~~~~~l~ 226 (320)
+++++|.+|-.-+...+-.+.++....+.
T Consensus 215 ~as~~F~LAlnyKQMeLY~A~pfF~fLLg 243 (510)
T KOG2575|consen 215 LASVLFVLALNYKQMELYHALPFFAFLLG 243 (510)
T ss_pred HHHHHHHHHHhHHHHHHHhchHHHHHHHH
Confidence 99999999999999888888765554444
No 43
>KOG2552 consensus Major facilitator superfamily permease - Cdc91p [General function prediction only]
Probab=36.63 E-value=4.4e+02 Score=26.23 Aligned_cols=69 Identities=20% Similarity=0.182 Sum_probs=51.9
Q ss_pred HHHHHHHHHhhchhhHHHHhhchh-HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcchhhHHHHHHHH
Q 020868 154 AALCASLLFCFNPASIFYTSIYSE-SLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCF 222 (320)
Q Consensus 154 ~a~~aall~~~~Pasif~~a~YtE-slF~~l~~~~l~~~~~~~~~~a~~~~~la~~~RsnGil~~~~~~~ 222 (320)
.+.++++++++||-++.-..+-|- +.-.+++...+|...+++..+++...++++.--.+.+++..+++.
T Consensus 145 i~~~v~l~Yl~NPlTilSCi~~St~~I~N~~v~~~ly~av~~~~~l~a~~la~~t~~s~yp~~L~~P~l~ 214 (388)
T KOG2552|consen 145 IGDLVALLYLFNPLTILSCIGLSTTVIENFAVAVSLYGAVTGRVPLAAFGLAIATHLSLYPATLTIPLLF 214 (388)
T ss_pred HHHHHHHHHHhCceeeeeeccccchHHHHHHHHHHHHHHHhcchHHHHHHHHHHHhcccchHHHHHHHHH
Confidence 466899999999999977655544 344666677788888898889999999988777777766654433
No 44
>KOG2927 consensus Membrane component of ER protein translocation complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=30.03 E-value=54 Score=32.22 Aligned_cols=14 Identities=21% Similarity=0.282 Sum_probs=10.4
Q ss_pred cccccHHHHHHHHH
Q 020868 92 AFLPLLPAFTHLLS 105 (320)
Q Consensus 92 AFfPl~P~l~r~~~ 105 (320)
.=||+||..+|...
T Consensus 205 vLFPLWP~~mR~gv 218 (372)
T KOG2927|consen 205 VLFPLWPRRMRQGV 218 (372)
T ss_pred HhcccCcHHHhcce
Confidence 44889998888644
No 45
>KOG2515 consensus Mannosyltransferase [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=25.04 E-value=7.9e+02 Score=25.51 Aligned_cols=84 Identities=12% Similarity=0.119 Sum_probs=46.4
Q ss_pred HHHHHHHHhCChhHHHHHHHHHhhchhhHHHHhhchhHHH-HHHHHHHHHHHHhhhHHHHHHHHHHHHhh-cchhhHHHH
Q 020868 141 FYRLSVMILKDPDAALCASLLFCFNPASIFYTSIYSESLY-ALFSVGGLYYLMSGALNISVLWLAISGCA-RSNGVLNAG 218 (320)
Q Consensus 141 ly~L~~~~~~~~~~a~~aall~~~~Pasif~~a~YtEslF-~~l~~~~l~~~~~~~~~~a~~~~~la~~~-RsnGil~~~ 218 (320)
+|+=..+.+ +.++|+...++.+++++-++-|...--|-| +.+...++=.....++-.+....++++.. =|=..+++.
T Consensus 113 l~~ai~~kf-~~~ia~~~i~f~~fssGmF~aStafLPSSF~M~~~~~al~a~l~~n~~~av~~~a~gailGWPFsa~l~l 191 (568)
T KOG2515|consen 113 LYKAICRKF-GLAIARIWIIFLLFSSGMFHASTAFLPSSFAMYLTVLALGAWLTENYTKAVAYVAIGAILGWPFSALLGL 191 (568)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHhcccceeeechhcchHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhccHHHHHHhh
Confidence 444333444 467889999999999998877755544444 44444444333455554444444444332 244445555
Q ss_pred HHHHHHH
Q 020868 219 YFCFQTM 225 (320)
Q Consensus 219 ~~~~~~l 225 (320)
+++.+.+
T Consensus 192 Pi~~~ll 198 (568)
T KOG2515|consen 192 PILLELL 198 (568)
T ss_pred HHHHHHH
Confidence 5555443
No 46
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=23.58 E-value=8.1e+02 Score=25.10 Aligned_cols=97 Identities=14% Similarity=0.097 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHhhchhhHHHHhhchhHHHHHHHHHHHHHHHh------------
Q 020868 126 GYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYTSIYSESLYALFSVGGLYYLMS------------ 193 (320)
Q Consensus 126 ~~lvs~~~~~~a~~~ly~L~~~~~~~~~~a~~aall~~~~Pasif~~a~YtEslF~~l~~~~l~~~~~------------ 193 (320)
....+....+++..+.=+|+++.. .++.-..+.++.++.=...++.. .+++...+.+..+...-.
T Consensus 277 ~~~~~~~~~l~~~~~~p~L~~~~g-kk~~~~~~~~~~~i~~~~~~f~~--~~~~~l~~~~~~i~~~g~~~~~~l~wam~~ 353 (467)
T COG2211 277 LLLASGAGLLIGLILWPRLVKKFG-KKKLFLIGLLLLAVGYLLLYFTP--AGSVVLIVVALIIAGVGTGIANPLPWAMVA 353 (467)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHhhc--CcchHHHHHHHHHHHHHhhccccccHHHhc
Confidence 333444444444555556665543 56666677777777777777765 444444443333322211
Q ss_pred -----hhHH----HHHHHHHHHHhhcchhhHHHHHHHHHHH
Q 020868 194 -----GALN----ISVLWLAISGCARSNGVLNAGYFCFQTM 225 (320)
Q Consensus 194 -----~~~~----~a~~~~~la~~~RsnGil~~~~~~~~~l 225 (320)
+++- ..|+.++..+++|--|..+++++.--.+
T Consensus 354 d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L 394 (467)
T COG2211 354 DTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWIL 394 (467)
T ss_pred chhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1221 5789999999999999998886654433
No 47
>KOG2292 consensus Oligosaccharyltransferase, STT3 subunit [Posttranslational modification, protein turnover, chaperones]
Probab=23.02 E-value=2.5e+02 Score=29.48 Aligned_cols=63 Identities=16% Similarity=0.181 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHHHHHhCChhHHHHHHHHHhhchhhHHHHh--hc-hhHHHHHHHHHHHHHHHhhh
Q 020868 132 VAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYTS--IY-SESLYALFSVGGLYYLMSGA 195 (320)
Q Consensus 132 ~~~~~a~~~ly~L~~~~~~~~~~a~~aall~~~~Pasif~~a--~Y-tEslF~~l~~~~l~~~~~~~ 195 (320)
+++-++++.-|.|++++. |...++.|+.+.++.|+-+-=++ .| .|....++.....|+..|..
T Consensus 125 ~FSg~TsiaTY~ltkEl~-~~gaGL~AA~fiaivPgYiSRSVAGSYDNE~IAIfal~~T~ylwiKav 190 (751)
T KOG2292|consen 125 LFSGLTSIATYLLTKELK-SAGAGLLAAAFIAIVPGYISRSVAGSYDNEGIAIFALLFTYYLWIKAV 190 (751)
T ss_pred hhhchHHHHHHHHHHHHh-cccccHHHHHHHhhCcccccccccccccchHHHHHHHHHHHHHHHHHh
Confidence 445567788999999887 77889999999999999875553 34 78888887777777776643
No 48
>PF05767 Pox_A14: Poxvirus virion envelope protein A14; InterPro: IPR008785 This family consists of several Poxvirus virion envelope protein A14-like sequences. A14 is a component of the virion membrane and has been found to be an H1 phosphatase substrate in vivo and in vitro. A14 is hyperphosphorylated on serine residues in the absence of H1 expression [].; GO: 0019031 viral envelope
Probab=20.93 E-value=3.5e+02 Score=21.42 Aligned_cols=25 Identities=16% Similarity=0.111 Sum_probs=16.3
Q ss_pred HHHHhhHHhhhhHHHHhhhhhhhcccC
Q 020868 247 CGALRCICIFAPFISFQVYGYFNMCLG 273 (320)
Q Consensus 247 ~~~l~~~iv~~P~~~~q~~~Y~~fC~~ 273 (320)
.+++.++++.+..+++ -.|.+||..
T Consensus 50 i~FI~giil~lG~~i~--s~ygr~C~~ 74 (92)
T PF05767_consen 50 ICFILGIILTLGIVIF--SMYGRYCRP 74 (92)
T ss_pred HHHHHHHHHHHHHHHH--HHHhhhcCC
Confidence 3455566666665553 689999964
No 49
>PF00040 fn2: Fibronectin type II domain; InterPro: IPR000562 Fibronectin is a multi-domain glycoprotein, found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes, that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin. Fibronectins are involved in a number of important functions e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The major part of the sequence of fibronectin consists of the repetition of three types of domains, which are called type I, II, and III []. Type II domain is approximately forty residues long, contains four conserved cysteines involved in disulphide bonds and is part of the collagen-binding region of fibronectin. In fibronectin the type II domain is duplicated. Type II domains have also been found in a range of proteins including blood coagulation factor XII; bovine seminal plasma proteins PDC-109 (BSP-A1/A2) and BSP-A3 []; cation-independent mannose-6-phosphate receptor []; mannose receptor of macrophages []; 180 Kd secretory phospholipase A2 receptor []. DEC-205 receptor []; 72 Kd and 92 Kd type IV collagenase (3.4.24.24 from EC) []; and hepatocyte growth factor activator [].; PDB: 1H8P_A 1PDC_A 1GXD_A 1CXW_A 1EAK_C 1CK7_A 3M7P_A 1E88_A 2FN2_A 3MQL_A ....
Probab=20.01 E-value=63 Score=21.60 Aligned_cols=26 Identities=27% Similarity=0.759 Sum_probs=13.0
Q ss_pred ccCCcCCCCCccccccCCcchhHhhhhccc
Q 020868 271 CLGRSPDEMRPWCKAKVPLLYNFIQSHYWY 300 (320)
Q Consensus 271 C~~~~~~~~~~WC~~~~P~~Ys~vQ~~YWn 300 (320)
|......+.++||.-+ ..|=|++-|+
T Consensus 15 Ct~~~~~~~~~WCatt----~~yd~d~~W~ 40 (42)
T PF00040_consen 15 CTTDGSSDGRPWCATT----ANYDRDGKWG 40 (42)
T ss_dssp -B-TTSSSSSEEEESS----SBHHHHS-EE
T ss_pred CcCCCCCCCCCCcccc----CCCccCCccc
Confidence 5443223348999877 2333555665
Done!