BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020874
(320 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P95649|CBBY_RHOSH Protein CbbY OS=Rhodobacter sphaeroides GN=cbbY PE=3 SV=1
Length = 230
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 125/223 (56%), Gaps = 12/223 (5%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYF-NK 137
A+LFD DG L +TE + HR +FN+TF + WD + Y ELL GGKER+ + ++
Sbjct: 4 AILFDVDGTLAETE-ELHRRAFNETFAALGVDWFWDREEYRELLTTTGGKERIARFLRHQ 62
Query: 138 TGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAV 197
G P P IA +H+ KTE F+ L+ + + LRPG+A LI +A G+++AV
Sbjct: 63 KGDPAPLP---------IADIHRAKTERFVALMAEGEIALRPGIADLIAEAKRAGIRLAV 113
Query: 198 CSTSNEKAVTAIVSFLLG-PERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVV 256
+T++ V A+ G P R I AGD+V KKP P IY LA L V P V
Sbjct: 114 ATTTSLPNVEALCRACFGHPAREIFDVIAAGDMVAEKKPSPDIYRLALRELDVPPERAVA 173
Query: 257 VEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD 299
+EDS GL AAK AG++CIV+ YT E+F AD + D +
Sbjct: 174 LEDSLNGLRAAKGAGLRCIVSPGFYTRHEEFAGADRLLDSFAE 216
>sp|O33513|CBBY_RHOCA Protein CbbY OS=Rhodobacter capsulatus GN=cbbY PE=3 SV=1
Length = 227
Score = 148 bits (373), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 126/214 (58%), Gaps = 10/214 (4%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
AL+FD DG L +TE + HR +FN+TF + L W + Y LL+ GGKERM +
Sbjct: 5 ALIFDVDGTLAETE-EVHRQAFNETFAAQGLDWYWSKEDYRTLLRTTGGKERMAKHRENL 63
Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
G PSD + IA LHK KT+ ++ +I + L PGVA+LID+A G+++A+
Sbjct: 64 G---SGPSDAK-----IADLHKAKTQRYVEIIASGQVGLLPGVAELIDRAKASGLRLAIA 115
Query: 199 STSNEKAVTAIVSFLLGPERAEKIQIFA-GDVVPRKKPDPAIYTLAASTLGVDPSSCVVV 257
+T+ V A+++ + ++ A GD V +KKP P +Y A LG+ P++C+
Sbjct: 116 TTTTRANVDALIAATFSKPAGDIFEVIAAGDEVAQKKPAPDVYLRALQGLGLPPAACLAF 175
Query: 258 EDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNAD 291
EDS GLA+A+AAG++ ++T S YT +DF AD
Sbjct: 176 EDSRAGLASARAAGLRVVLTPSEYTRGDDFSAAD 209
>sp|P40119|CBBYC_CUPNH Protein CbbY, chromosomal OS=Cupriavidus necator (strain ATCC 17699
/ H16 / DSM 428 / Stanier 337) GN=cbbYC PE=3 SV=3
Length = 254
Score = 141 bits (356), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 123/231 (53%), Gaps = 15/231 (6%)
Query: 78 SALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNK 137
AL+FD DG L DTE H +FN F E L WD LY LLK+ GGKER+ Y+
Sbjct: 2 QALIFDVDGTLADTES-AHLQAFNAAFAEVGLDWYWDAPLYTRLLKVAGGKERLMHYWRM 60
Query: 138 TGWPEKAPSDEEER----KQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGV 193
EE R K+ I ++H KT + + LPLRPG+A+LID+A E G+
Sbjct: 61 V-------DPEEARGCKVKETIDAVHAIKTRHYAERVGAGGLPLRPGIARLIDEAGEAGL 113
Query: 194 KVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV--VPRKKPDPAIYTLAASTLGVDP 251
+A+ +T+ + A++ LG + + GD KKP P +Y LG++
Sbjct: 114 PLAIATTTTPANLDALLQAPLGADWRRRFAAI-GDAGTTAIKKPAPDVYLAVLERLGLEG 172
Query: 252 SSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPE 302
C+ +EDS GL AA+AAG+ +VT ++++A++ F A V +GDP E
Sbjct: 173 GDCLAIEDSANGLRAARAAGIPTVVTPTAFSAQDSFEGALLVLPHLGDPGE 223
>sp|Q04541|CBBYP_CUPNH Protein CbbY, plasmid OS=Cupriavidus necator (strain ATCC 17699 /
H16 / DSM 428 / Stanier 337) GN=cbbYP PE=3 SV=1
Length = 254
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 121/230 (52%), Gaps = 13/230 (5%)
Query: 78 SALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNK 137
AL+FD DG L DTE H +FN F E L WD LY LLK+ GGKER+ Y+
Sbjct: 2 QALIFDVDGTLADTET-AHLQAFNAAFAEVGLDWHWDAPLYTRLLKVAGGKERLMHYWRM 60
Query: 138 TGWPEKAPSDEEER----KQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGV 193
EE R K+ I ++H KT + + LPLRPG+A+LI +A E G+
Sbjct: 61 V-------DPEEARGCKVKETIDAVHAIKTRHYAERVGAGGLPLRPGIARLIAEAGEAGL 113
Query: 194 KVAVCSTSNEKAVTAIVSFLLGPE-RAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPS 252
+A+ +T+ + A++ LG + R I KKP P +Y LG++
Sbjct: 114 PLAIATTTTPANLDALLQAHLGADWRGRFAAICDAGTTAIKKPAPDVYLAVLERLGLEAG 173
Query: 253 SCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPE 302
C+ +EDS GL AA+AAG+ +VT ++++A++ F A V +GDP E
Sbjct: 174 DCLAIEDSGNGLRAARAAGIPTVVTPTTFSAQDSFEGALLVLPHLGDPAE 223
>sp|P54607|YHCW_BACSU Uncharacterized protein YhcW OS=Bacillus subtilis (strain 168)
GN=yhcW PE=3 SV=1
Length = 220
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 106/225 (47%), Gaps = 26/225 (11%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
AL+FD DG+++DTE + + + F+E G + ++G+++ G +
Sbjct: 4 ALIFDFDGLILDTETHEYEV-LQEIFEEH--GSVLPLSVWGKVIGTAAGFRPFEYLEEQI 60
Query: 139 GWPEKAPSDEE----ERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVK 194
G K + EE R++F + K RPGV ++ A + G+K
Sbjct: 61 G---KKLNHEELTQLRRERFAKRMESEKA--------------RPGVEAYLNAAKDLGLK 103
Query: 195 VAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254
+ + S+S+ K V+ + + + E IQ D V KP+P +Y LAA LGV P+ C
Sbjct: 104 IGLASSSDYKWVSGHLKQIGLFDDFEVIQ--TADDVEEVKPNPELYLLAAKNLGVSPAEC 161
Query: 255 VVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD 299
+ EDS G AAK AGMKC++ + T F + D + + +
Sbjct: 162 LAFEDSVNGSIAAKRAGMKCVIVPNKVTGTLMFEDYDHRLESMAE 206
>sp|Q7ADF8|YNIC_ECO57 2-deoxyglucose-6-phosphate phosphatase OS=Escherichia coli O157:H7
GN=yniC PE=3 SV=1
Length = 222
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 94/201 (46%), Gaps = 16/201 (7%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
A +FD DG+L+D+E R + LGV D+ EL G + M
Sbjct: 9 AAIFDMDGLLIDSEPLWDRAELDVM---ASLGV--DISRRNELPDTLGLRIDMVVDLWYA 63
Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
P PS +E ++ IA + L+E+ PL PGV + + E+G+ V +
Sbjct: 64 RQPWNGPSRQEVVERVIAR--------AISLVEETR-PLLPGVREAVALCKEQGLLVGLA 114
Query: 199 STSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVE 258
S S + +++ R + + + +P KP P +Y A+ LGVDP +CV +E
Sbjct: 115 SASPLHMLEKVLTMF--DLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALE 172
Query: 259 DSTIGLAAAKAAGMKCIVTKS 279
DS G+ A+KAA M+ IV +
Sbjct: 173 DSVNGMIASKAARMRSIVVPA 193
>sp|P77247|YNIC_ECOLI 2-deoxyglucose-6-phosphate phosphatase OS=Escherichia coli (strain
K12) GN=yniC PE=1 SV=1
Length = 222
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 94/201 (46%), Gaps = 16/201 (7%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
A +FD DG+L+D+E R + LGV D+ EL G + M
Sbjct: 9 AAIFDMDGLLIDSEPLWDRAELDVM---ASLGV--DISRRNELPDTLGLRIDMVVDLWYA 63
Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
P PS +E ++ IA + L+E+ PL PGV + + E+G+ V +
Sbjct: 64 RQPWNGPSRQEVVERVIAR--------AISLVEETR-PLLPGVREAVALCKEQGLLVGLA 114
Query: 199 STSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVE 258
S S + +++ R + + + +P KP P +Y A+ LGVDP +CV +E
Sbjct: 115 SASPLHMLEKVLTMF--DLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALE 172
Query: 259 DSTIGLAAAKAAGMKCIVTKS 279
DS G+ A+KAA M+ IV +
Sbjct: 173 DSVNGMIASKAARMRSIVVPA 193
>sp|Q9X0Y1|P1254_THEMA Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga
maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM
10099) GN=TM_1254 PE=1 SV=1
Length = 216
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 97/202 (48%), Gaps = 26/202 (12%)
Query: 78 SALLFDCDGVLVDTEKDGHRISFNDTFKEKE-LGVTWDVDLYGELLKIGGGKERMTAYFN 136
A++FD DGVL+DTE + F + E G + DL+ +I G ER
Sbjct: 2 EAVIFDMDGVLMDTEP----LYFEAYRRVAESYGKPYTEDLHR---RIMGVPER------ 48
Query: 137 KTGWP--EKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVK 194
G P +A ++ + F +H+ K +F +LL PGV + ++ K +K
Sbjct: 49 -EGLPILMEALEIKDSLENFKKRVHEEKKRVF-----SELLKENPGVREALEFVKSKRIK 102
Query: 195 VAVC-STSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSS 253
+A+ ST +A+ + L E+ + +F GD V KPDP IY L L V P
Sbjct: 103 LALATSTPQREALERLRRLDL--EKYFDVMVF-GDQVKNGKPDPEIYLLVLERLNVVPEK 159
Query: 254 CVVVEDSTIGLAAAKAAGMKCI 275
VV EDS G+ AAK+AG++ I
Sbjct: 160 VVVFEDSKSGVEAAKSAGIERI 181
>sp|O06995|PGMB_BACSU Beta-phosphoglucomutase OS=Bacillus subtilis (strain 168) GN=yvdM
PE=1 SV=1
Length = 226
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 25/200 (12%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
A++FD DGV+ DT + H +++ +++ + +D D+ E LK +E + +
Sbjct: 3 AVIFDLDGVITDT-AEYHFLAWKHI--AEQIDIPFDRDM-NERLKGISREESLESILIFG 58
Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLP--LRPGVAKLIDQALEKGVKVA 196
G K + E++ L RK + +LI KL P L PG+ +L+ Q + +K+
Sbjct: 59 GAETKYTNAEKQ------ELMHRKNRDYQMLI-SKLTPEDLLPGIGRLLCQLKNENIKIG 111
Query: 197 VCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVP----RKKPDPAIYTLAASTLGVDPS 252
+ S+S + I+ R I F V P + KPDP I+ AA+ L V P+
Sbjct: 112 LASSS--RNAPKIL------RRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPA 163
Query: 253 SCVVVEDSTIGLAAAKAAGM 272
C +ED+ G++A K+AGM
Sbjct: 164 DCAAIEDAEAGISAIKSAGM 183
>sp|Q88A30|GPH_PSESM Phosphoglycolate phosphatase OS=Pseudomonas syringae pv. tomato
(strain DC3000) GN=PSPTO_0567 PE=3 SV=2
Length = 272
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 97/216 (44%), Gaps = 25/216 (11%)
Query: 73 ASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMT 132
A LP ++FD DG LVD+ D L V D + EL + G E +
Sbjct: 9 AGKLPKLIMFDLDGTLVDSVPD--------------LAVAVDT-MLAELGRPTAGLESVR 53
Query: 133 AYFNKTGWP---EKAPSDEEERKQFIASLHKRKTELFMVLIEKK--LLPLRPGVAKLIDQ 187
A+ G P +A ++ + +L +R ++FM +K + PGV + +
Sbjct: 54 AWVG-NGAPVLVRRALANNLDHSGVDEALAERGLDIFMRAYAEKHEFTVVYPGVRETLKW 112
Query: 188 ALEKGVKVAVCSTSNEKAVTAIVSFL-LGPERAEKIQIFAGDVVPRKKPDPAIYTLAAST 246
+ GV++A+ + E+ V ++ + LG R + I GD +P+KKPDPA
Sbjct: 113 LQKMGVEMALITNKPERFVAPLLDEMKLG--RFFR-WIIGGDTMPQKKPDPAALFFVMKM 169
Query: 247 LGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYT 282
GV S + V DS + AAKAAG+ C+ Y
Sbjct: 170 AGVPASQSLFVGDSRSDVQAAKAAGVACVALSYGYN 205
>sp|Q48NS2|GPH_PSE14 Phosphoglycolate phosphatase OS=Pseudomonas syringae pv.
phaseolicola (strain 1448A / Race 6) GN=PSPPH_0648 PE=3
SV=2
Length = 272
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 25/216 (11%)
Query: 73 ASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMT 132
A LP ++FD DG LVD+ D L V D + EL + G E +
Sbjct: 9 AGKLPKLVMFDLDGTLVDSVPD--------------LAVAVDT-MLAELGRPIAGLESVR 53
Query: 133 AYFNKTGWP---EKAPSDEEERKQFIASLHKRKTELFMVLIEKK--LLPLRPGVAKLIDQ 187
A+ G P +A ++ + L ++ E+FM +K + PGV + +
Sbjct: 54 AWVG-NGAPVLVRRALANHLDHSGVDDELAEQGLEIFMRAYAQKHEFTVVYPGVRETLKW 112
Query: 188 ALEKGVKVAVCSTSNEKAVTAIVSFL-LGPERAEKIQIFAGDVVPRKKPDPAIYTLAAST 246
+ GV++A+ + E+ V ++ + LG R + I GD +P+KKPDPA
Sbjct: 113 LQKMGVEMALITNKPERFVAPLLDEMKLG--RFFR-WIIGGDTMPQKKPDPAALFFVMKM 169
Query: 247 LGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYT 282
GV S + V DS + AAKAAG+ C+ Y
Sbjct: 170 AGVPASQALFVGDSRSDVQAAKAAGVACVALSYGYN 205
>sp|Q4ZMI2|GPH_PSEU2 Phosphoglycolate phosphatase OS=Pseudomonas syringae pv. syringae
(strain B728a) GN=Psyr_4610 PE=3 SV=1
Length = 272
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 96/216 (44%), Gaps = 25/216 (11%)
Query: 73 ASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMT 132
A LP ++FD DG LVD+ D L V D + EL + G E +
Sbjct: 9 AGKLPKLIMFDLDGTLVDSVPD--------------LAVAVDT-MLAELGRPIAGLESVR 53
Query: 133 AYFNKTGWP---EKAPSDEEERKQFIASLHKRKTELFMVLIEKK--LLPLRPGVAKLIDQ 187
A+ G P +A ++ + +L ++ E+FM +K + PGV + +
Sbjct: 54 AWVG-NGAPVLVRRALANNLDHSGVDDALAEQGLEIFMRAYAQKHEFTVVYPGVRETLKW 112
Query: 188 ALEKGVKVAVCSTSNEKAVTAIVSFL-LGPERAEKIQIFAGDVVPRKKPDPAIYTLAAST 246
+ GV++A+ + E+ V ++ + LG R + I GD +P+KKPDPA
Sbjct: 113 LQKMGVEMALITNKPERFVAPLLDEMKLG--RFFR-WIVGGDTMPQKKPDPAALFFVMKM 169
Query: 247 LGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYT 282
G S + V DS + AAKAAG+ C+ Y
Sbjct: 170 AGAPASQSLFVGDSRSDVQAAKAAGVACVALSYGYN 205
>sp|Q3J8A0|GPH_NITOC Phosphoglycolate phosphatase OS=Nitrosococcus oceani (strain ATCC
19707 / NCIMB 11848) GN=Noc_2493 PE=3 SV=1
Length = 225
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 102/233 (43%), Gaps = 35/233 (15%)
Query: 77 PSALLFDCDGVLVDTEKDGHRISF-NDTFKEKELGVTWDVDLYGEL---LKIGGGKERMT 132
P +L D DG LVD+ D ++F DT E+ LG+ L GE +G G ER+
Sbjct: 5 PEMILIDVDGTLVDSVPD---LTFCTDTMMER-LGLP----LRGETKVRQWVGNGVERLI 56
Query: 133 AYF---NKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEK---KLLPLRPGVAKLID 186
N G PE+ L+++ +F+ L K L PGV + +
Sbjct: 57 KRALVDNMEGEPEE-------------DLYQKAETIFLALYADNTSKRSHLYPGVNEGLA 103
Query: 187 QALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAAST 246
+G +V C T+ T + LG +I + +GD +P KKP PA AAS
Sbjct: 104 WLKSQGYRVG-CVTNKAAQFTYPLLTELGIIDYFEI-VISGDTLPEKKPHPAPLLHAASH 161
Query: 247 LGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNA--DAVFDCI 297
G+ P +++ DS + AA+AA + + Y D ++ D+V D +
Sbjct: 162 FGIAPEKALMIGDSISDVKAARAANFQIVCLSYGYNHGVDIRDSQPDSVIDSL 214
>sp|P77475|YQAB_ECOLI Fructose-1-phosphate phosphatase YqaB OS=Escherichia coli (strain
K12) GN=yqaB PE=1 SV=1
Length = 188
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 86/200 (43%), Gaps = 24/200 (12%)
Query: 78 SALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNK 137
+ L+FD DG ++DTE HR ++ + G+ +D+ + M A
Sbjct: 6 AGLIFDMDGTILDTEPT-HRKAWREVLGH--YGLQYDI-------------QAMIALNGS 49
Query: 138 TGWP-EKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALE-KGVKV 195
W +A + + +L + KTE ++ + PL L+D G +
Sbjct: 50 PTWRIAQAIIELNQADLDPHALAREKTEAVRSMLLDSVEPL-----PLVDVVKSWHGRRP 104
Query: 196 AVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCV 255
T +E A+ + LG R + A D V KP P + L A +GV P+ CV
Sbjct: 105 MAVGTGSESAIAEALLAHLG-LRHYFDAVVAADHVKHHKPAPDTFLLCAQRMGVQPTQCV 163
Query: 256 VVEDSTIGLAAAKAAGMKCI 275
V ED+ G+ AA+AAGM +
Sbjct: 164 VFEDADFGIQAARAAGMDAV 183
>sp|P77366|PGMB_ECOLI Beta-phosphoglucomutase OS=Escherichia coli (strain K12) GN=ycjU
PE=1 SV=1
Length = 219
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 21/214 (9%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
++FD DGV+ DT H ++ E+G++ D + E LK E +
Sbjct: 5 GVIFDLDGVITDTAHL-HFQAWQQI--AAEIGISIDAQ-FNESLKGISRDESLRRILQHG 60
Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFM-VLIEKKLLPLRPGVAKLIDQALEKGVKVAV 197
G ++ + +ER Q L RK L++ L E + + PG+ L+ + + V +
Sbjct: 61 G--KEGDFNSQERAQ----LAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGL 114
Query: 198 CSTS-NEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK--KPDPAIYTLAASTLGVDPSSC 254
S S N + A + + F D K KPDP I+ A + LGV P +C
Sbjct: 115 ASVSLNAPTILAALEL-------REFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQAC 167
Query: 255 VVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFL 288
+ +ED+ G+ A A+GM+ + + T + L
Sbjct: 168 IGIEDAQAGIDAINASGMRSVGIGAGLTGAQLLL 201
>sp|Q9S586|GPH1_PSEAE Phosphoglycolate phosphatase 1 OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=gph1
PE=3 SV=1
Length = 272
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 91/215 (42%), Gaps = 23/215 (10%)
Query: 73 ASVLPSALLFDCDGVLVDTEKD--GHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKER 130
A+ LP ++FD DG LVD+ D S +F G+ ++ + G R
Sbjct: 9 ATRLPRLVMFDLDGTLVDSVPDLTAAVDSMLASFGRPPAGIE-------KVRQWIGNGAR 61
Query: 131 MTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLI--EKKLLPLRPGVAKLIDQA 188
+ G E EEE + +A LFM L + PGV +
Sbjct: 62 VLVRRALAGSIEHDGIGEEETEAALA--------LFMEAYADSHALTEVYPGVVDTLKWL 113
Query: 189 LEKGVKVAVCSTSNEKAVTAIVSFL-LGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTL 247
GV++A+ + E+ V ++ + LG R + I GD +P++KPDPA
Sbjct: 114 KRNGVEMALITNKPERFVAPLLDEMKLG--RYFR-WIIGGDTLPQQKPDPAALLFVMKMA 170
Query: 248 GVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYT 282
G++P + V DS + AAKAAG++C Y
Sbjct: 171 GIEPEDALFVGDSRNDVLAAKAAGVRCAALTYGYN 205
>sp|Q88QS2|GPH_PSEPK Phosphoglycolate phosphatase OS=Pseudomonas putida (strain KT2440)
GN=PP_0416 PE=3 SV=1
Length = 272
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 23/212 (10%)
Query: 76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYF 135
LP ++FD DG L+D+ D ++ ELG L +G G + +
Sbjct: 12 LPRLVMFDLDGTLIDSVPD---LAAAVDRMLLELGRP-PAGLEAVRHWVGNGAQVLVRRA 67
Query: 136 NKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKV 195
G + A D+ +Q +A E +L + PGV + ++GV++
Sbjct: 68 LAGG-IDHADVDDALAEQALALFMDAYAE------SHELTVVYPGVRDTLRWLRKQGVEM 120
Query: 196 AVCSTSNEKAVTAIVSFLLGPERAEKI-----QIFAGDVVPRKKPDPAIYTLAASTLGVD 250
A+ + E+ V ++ + KI I GD +P+KKPDPA GV
Sbjct: 121 ALITNKPERFVGPLLDQM-------KIGNFFRWIIGGDTLPQKKPDPAALLFVMQMAGVT 173
Query: 251 PSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYT 282
P + V DS + AAKAAG++C+ Y
Sbjct: 174 PQQSLFVGDSRSDVQAAKAAGVQCVGLTYGYN 205
>sp|Q2RPW9|GPH_RHORT Phosphoglycolate phosphatase OS=Rhodospirillum rubrum (strain ATCC
11170 / NCIB 8255) GN=cbbZ PE=3 SV=2
Length = 241
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 97/225 (43%), Gaps = 19/225 (8%)
Query: 76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAY- 134
+P A++FD DG LV + G + N T E +L +D +G G + A
Sbjct: 1 MPKAVIFDLDGTLVHSLP-GLTDALNKTLAEDDLA---PLDEAAVKRMVGEGAGLLVARA 56
Query: 135 FNKTGWPEKAPSDEEERKQFIASL--HKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKG 192
F G +D+ + +A H L + PG L+ +G
Sbjct: 57 FAAYGLGRADDADDTATQARLARFLAHYAPDPLAGASV-------YPGALALLGALAARG 109
Query: 193 VKVAVCSTSNEKAVTAIVSFLLGPERAEKI-QIFAGDVVPRKKPDPAIYTLAASTLGVDP 251
+++ VC+ E A++ L A+ I + GD + ++KPDPA +LGV+
Sbjct: 110 IRLGVCTNKPEGPARALLEGL---GLADPIMDVVGGDTLAQRKPDPAPLRALLDSLGVEA 166
Query: 252 SSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEE-DFLNADAVFD 295
++V DS +A AKAAG+ +V Y+ E L A AVFD
Sbjct: 167 DQALMVGDSPTDVATAKAAGVPVVVMSYGYSREPVASLGALAVFD 211
>sp|Q94529|GS1_DROME Probable pseudouridine-5'-monophosphatase OS=Drosophila
melanogaster GN=Gs1l PE=2 SV=2
Length = 231
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 98/236 (41%), Gaps = 31/236 (13%)
Query: 81 LFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGW 140
+FD DG+L+DTE+ + + G T+ ++ +++ G + A F +
Sbjct: 13 VFDMDGLLLDTER---LYTVATEMILEPYGKTYPFEIKEQVM---GLQTEPLARFMVEHY 66
Query: 141 PEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCST 200
+E R+Q + TE+ M + L PG +L+ V + ++
Sbjct: 67 ELPMSWEEYARQQ------RANTEILM-----RNAQLMPGAERLLRHLHANKVPFCLATS 115
Query: 201 SNEKAVTAIVSFLLGPERAEKIQIFAGDV-------VPRKKPDPAIYTLAASTLGV--DP 251
S V L + E +F V V KP P I+ +AA GV P
Sbjct: 116 SGADMVE-----LKTAQHRELFSLFNHKVCGSSDKEVVNGKPAPDIFLVAAGRFGVPPKP 170
Query: 252 SSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERFDL 307
S C+V EDS G+ AA +AGM+ ++ ++E +A V + D E+F L
Sbjct: 171 SDCLVFEDSPNGVTAANSAGMQVVMVPDPRLSQEKTSHATQVLASLADFKPEQFGL 226
>sp|Q9HZ62|GPH2_PSEAE Phosphoglycolate phosphatase 2 OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=gph2
PE=3 SV=1
Length = 226
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 97/237 (40%), Gaps = 25/237 (10%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
A+LFD DG L+DT D I+ + D +++ GG + + A F
Sbjct: 8 AVLFDMDGTLLDTAPDF--IAITQAMRAAHGLPPVDEQRVRDVVS-GGARAMVAAAF--- 61
Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRP--GVAKLIDQALEKGVKVA 196
G +P E R++F+ R E VL RP G+ +L+ + G+
Sbjct: 62 GLSLDSPEVEPLRQEFL----DRYQEHCAVLS-------RPYDGIPELLAAIEKAGLIWG 110
Query: 197 VCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVV 256
V + + I+ L ER+ + D V R KPDP LA S LG+DPS +
Sbjct: 111 VVTNKPVRFAEPIMQRLGYAERSRVL--VCPDHVTRSKPDPEPLLLACSQLGIDPSRVLF 168
Query: 257 VEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERFDL---AFC 310
+ D + + + AG K + Y ED A D I D P E D+ A C
Sbjct: 169 IGDDLRDIESGRDAGTKTAAVRYGYIHPEDN-PAHWGADVIVDHPRELIDVLDRALC 224
>sp|P42509|GPH_PSEPU Probable phosphoglycolate phosphatase (Fragment) OS=Pseudomonas
putida GN=gph PE=3 SV=1
Length = 251
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL-LGPERAEKIQIFAGDVVPRKKPDP 237
PGV + ++GV++A+ + E+ V ++ + +G R + I GD +P+KKPDP
Sbjct: 83 PGVKDTLRWLQKQGVEMALITNKPERFVAPLLDQMKIG--RYFRWMI-GGDTLPQKKPDP 139
Query: 238 AIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYT 282
A GV P + V DS + AAKAAG++C+ Y
Sbjct: 140 AALLFVMQMAGVTPQQSLFVGDSRSDVLAAKAAGVQCVGLTYGYN 184
>sp|Q08623|HDHD1_HUMAN Pseudouridine-5'-monophosphatase OS=Homo sapiens GN=HDHD1 PE=1 SV=3
Length = 228
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 103/242 (42%), Gaps = 38/242 (15%)
Query: 78 SALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNK 137
+ L+FD DG+L+DTE+ + + F + + +WDV + GK+ + A
Sbjct: 9 THLIFDMDGLLLDTER-LYSVVFQEICNRYDKKYSWDVK------SLVMGKKALEAAQII 61
Query: 138 TGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLP---LRPGVAKLIDQALEKGVK 194
+ S EE + + +T+L K++ P L PG KLI + G+
Sbjct: 62 IDVLQLPMSKEE-------LVEESQTKL------KEVFPTAALMPGAEKLIIHLRKHGIP 108
Query: 195 VAVCSTSNEKAVTAIVSFLLGPERAEKI-----QIFAGD--VVPRKKPDPAIYTLAASTL 247
A+ ++S SF + R ++ I GD V KPDP I+ A
Sbjct: 109 FALATSSGS------ASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRF 162
Query: 248 GVDPS--SCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERF 305
P+ C+V ED+ G+ AA AAGM+ ++ + + A V + + D E F
Sbjct: 163 SPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPELF 222
Query: 306 DL 307
L
Sbjct: 223 GL 224
>sp|Q4K4Z4|GPH_PSEF5 Phosphoglycolate phosphatase OS=Pseudomonas fluorescens (strain
Pf-5 / ATCC BAA-477) GN=PFL_5630 PE=3 SV=1
Length = 272
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 91/220 (41%), Gaps = 39/220 (17%)
Query: 76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIG---GGKERMT 132
LP ++FD DG LVD+ D L D LLK+G G E +
Sbjct: 12 LPRLVMFDLDGTLVDSVPD--------------LAAAVD----QMLLKLGRKPAGVEAVR 53
Query: 133 AYFNKTGWP---EKAPSDEEERKQFIASLHKRKTELFMVLIE--KKLLPLRPGVAKLIDQ 187
+ G P +A ++ E + + ELF E +L + PG + +
Sbjct: 54 EWVG-NGAPMLVRRALANSLEAQGVDDVEAEYALELFNTAYEDSHELTVVYPGARETLKW 112
Query: 188 ALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKI-----QIFAGDVVPRKKPDPAIYTL 242
++GV++A+ + E+ V ++ + KI I GD +P+KKPDPA
Sbjct: 113 LHKQGVEMALITNKPERFVAPLLDQM-------KIGRYFRWIIGGDTLPQKKPDPAALFF 165
Query: 243 AASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYT 282
V S + V DS + AAKAAG+KC+ Y
Sbjct: 166 VMKMASVPASQSLFVGDSRSDVLAAKAAGVKCVALSYGYN 205
>sp|Q3K5U8|GPH_PSEPF Phosphoglycolate phosphatase OS=Pseudomonas fluorescens (strain
Pf0-1) GN=Pfl01_5119 PE=3 SV=1
Length = 272
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Query: 179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL-LGPERAEKIQIFAGDVVPRKKPDP 237
PGV + ++GV +A+ + E+ V ++ + +G R K I GD +P+KKPDP
Sbjct: 104 PGVRDTLKWLHKQGVAMALITNKPERFVAPLLDQMKIG--RYFK-WIIGGDTLPQKKPDP 160
Query: 238 AIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYT 282
A G+ S + V DS + AAKAAG+KC+ Y
Sbjct: 161 AALFFVMKMSGIPASQSLFVGDSRSDVLAAKAAGVKCVGLSYGYN 205
>sp|Q9PAM6|GPH_XYLFA Phosphoglycolate phosphatase OS=Xylella fastidiosa (strain 9a5c)
GN=gph PE=3 SV=1
Length = 229
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 180 GVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAI 239
GV ++D ALE V T+ + + ++ LLG + + GD + +KP P
Sbjct: 99 GVEMMLD-ALECAGTVWGIVTNKPEFLARLILPLLG-WTSRCAVLIGGDTLAERKPHPLP 156
Query: 240 YTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEED 286
AA +GV P+ CV V D + AA+AAGM +V Y + ED
Sbjct: 157 LLTAAERIGVMPTDCVYVGDDVSDIQAARAAGMPSMVALWGYRSHED 203
>sp|Q87BG6|GPH_XYLFT Phosphoglycolate phosphatase OS=Xylella fastidiosa (strain
Temecula1 / ATCC 700964) GN=gph PE=3 SV=1
Length = 229
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 86/216 (39%), Gaps = 18/216 (8%)
Query: 71 CSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKER 130
S + P +LFD DG L+D+ D + +T L+++ R
Sbjct: 6 VSGNAFPRTVLFDLDGTLLDSAPDMLATANAMLAARGRAPIT--------LMQLRPVISR 57
Query: 131 MTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALE 190
T +PE D + I +R + LI P GV ++ ALE
Sbjct: 58 GTFRIIAVAFPEL---DAAAIQGLIPEFLQR----YEALIGSVSKPFD-GVEMML-HALE 108
Query: 191 KGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVD 250
V T+ + + ++ LLG + + GD + +KP P AA +GV
Sbjct: 109 CAGTVWGIVTNKPEFLARLILPLLG-WTSRCAVLIGGDTLAERKPHPLPLLTAAERIGVM 167
Query: 251 PSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEED 286
P+ CV V D + AA+AAGM +V Y + ED
Sbjct: 168 PTDCVYVGDDVRDIQAARAAGMPSMVALWGYRSHED 203
>sp|P44004|Y488_HAEIN Uncharacterized protein HI_0488 OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0488 PE=3 SV=1
Length = 200
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 21/202 (10%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
L+FD DG L+DT H ++ T K+ G +D + + GG R A
Sbjct: 12 GLIFDMDGTLIDTMP-VHAQAW--TMVGKKFGYEFDFQI---MYNFGGATVRTIA----- 60
Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
G KA + +R + + + KR+ ++ + KLLP I ++ + +A+
Sbjct: 61 GEMMKAANMPLDRIEDVLAA-KRELSYQLIPTQSKLLPTFE-----IVKSFHQKKPIALG 114
Query: 199 STSNEKAVTAIVSFL-LGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVV 257
S S+ K + ++ L + P I + D V KP P + A + +PS C+V
Sbjct: 115 SGSHRKIIDMLMDKLAIAPYFN---AIVSADDVKEHKPHPETFLRCAELIQANPSRCIVF 171
Query: 258 EDSTIGLAAAKAAGMKCIVTKS 279
ED+ +G+ A +AGM ++
Sbjct: 172 EDADLGVQAGLSAGMDVFDVRT 193
>sp|Q2Y6G2|GPH_NITMU Phosphoglycolate phosphatase OS=Nitrosospira multiformis (strain
ATCC 25196 / NCIMB 11849) GN=Nmul_A2370 PE=3 SV=1
Length = 227
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 21/220 (9%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLK--IGGGKERMTAYFN 136
A++ D DG L+DT D ++ KELG +L E ++ IG G E++ +
Sbjct: 9 AVMIDLDGTLLDTAPD---LATAANMMLKELG---KAELPLETIQSYIGKGIEKLVKR-S 61
Query: 137 KTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVA 196
TG + P + R+ L++R E + + + PGV + ++ G ++A
Sbjct: 62 LTGDLDGEPDSDLLRRAM--PLYERSYEKTLYVDTRAY----PGVREGLNALRAGGFRLA 115
Query: 197 VCSTSNEKAVTAIVSFLLGPERAEKIQIF-AGDVVPRKKPDPAIYTLAASTLGVDPSSCV 255
C T+ +A T + L E + I +GD +P+KKPDP A + P +
Sbjct: 116 -CVTNKAEAFT--LPLLRAAELLDYFDIVVSGDSLPKKKPDPMPLLHACERFEIQPHDML 172
Query: 256 VVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF--LNADAV 293
+V DS AA+AAG Y D L+ DA+
Sbjct: 173 LVGDSLNDAQAARAAGSHVFCVPYGYNEGRDVYELDCDAI 212
>sp|O59760|YJM7_SCHPO Putative uncharacterized hydrolase C1020.07 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPCC1020.07 PE=3 SV=1
Length = 236
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 97/229 (42%), Gaps = 58/229 (25%)
Query: 75 VLPSALLFDCDGVLVDTE-----------KDGHRISFNDTFKEKELGVTWDVDLYGELLK 123
++P A LFD DG+LVDTE K ++ F+ K K +G T
Sbjct: 1 MIPEACLFDMDGLLVDTESIYTKSTNIILKRYNKGPFSMEVKAKMMGRT----------- 49
Query: 124 IGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAK 183
KE + + +G + +++IA + + EL+ + PL PGV
Sbjct: 50 ---SKEASRIFLDWSG-------IDLTCEEYIALQRETQAELW-----RHTKPL-PGVMN 93
Query: 184 LIDQALEKGVKVAVCSTS---NEKAVTAIVSFLLGPERAEKIQIFAGD----VVPRKKPD 236
L+ + + +A+ ++S N + +A +S L I GD V R KP
Sbjct: 94 LLSKLKSLNIPIALATSSDTHNFEKKSAHLSHLFDHFDG---NIITGDDPRLPVGRGKPH 150
Query: 237 PAIYTLAASTLG----------VDPSSCVVVEDSTIGLAAAKAAGMKCI 275
P I+ +A + + P +C+V EDS G+ + +AAGMK +
Sbjct: 151 PDIWFIALKMINDKRKAQGQAEILPENCLVFEDSITGVQSGRAAGMKVV 199
>sp|Q86ZR7|YKD3A_YEAST Putative uncharacterized hydrolase YKL033W-A OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YKL033W-A
PE=1 SV=2
Length = 236
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 88/215 (40%), Gaps = 43/215 (20%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELG-VTWDVDLYGELLKIGGGKERMTAYFNK 137
A LFD DG+L++TE D + + N+T E G +TWDV + + L +R+ ++
Sbjct: 9 ACLFDMDGLLINTE-DIYTETLNETLAEFGKGPLTWDVKIKLQGLPGPEAGKRVIEHY-- 65
Query: 138 TGWPEKAP---SDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVK 194
K P + +ER + SL E PG L+ K +
Sbjct: 66 -----KLPITLDEYDERNVALQSLKWGTCEFL------------PGALNLLKYLKLKNIP 108
Query: 195 VAVCSTSNEKAVTAIVSFLLGPERAEKIQIF----AGD----VVPRKKPDPAIYTLAAST 246
+A+C++SN+ S L E +F GD R KP P I+ L
Sbjct: 109 IALCTSSNKTKFRGKTSHL-----EEGFDLFDTIVTGDDPRIAKGRGKPFPDIWQLGLKE 163
Query: 247 LG------VDPSSCVVVEDSTIGLAAAKAAGMKCI 275
L + P C+V ED G+ +AKA G I
Sbjct: 164 LNEKFHTDIKPDECIVFEDGIPGVKSAKAFGAHVI 198
>sp|P71447|PGMB_LACLA Beta-phosphoglucomutase OS=Lactococcus lactis subsp. lactis (strain
IL1403) GN=pgmB PE=1 SV=2
Length = 221
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 36/204 (17%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKE--KELGVTWDVDLYGELLKIGGGKERMTAYFN 136
A+LFD DGV+ DT + R +K +E+G+ + E LK G R +
Sbjct: 4 AVLFDLDGVITDTAEYHFR-----AWKALAEEIGINGVDRQFNEQLK---GVSREDSLQK 55
Query: 137 KTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLP--LRPGVAKLIDQALEKGVK 194
+K S EE ++ L KRK + ++ +I+ + P + PG+ +L+ +K
Sbjct: 56 ILDLADKKVSAEEFKE-----LAKRKNDNYVKMIQD-VSPADVYPGILQLLKDLRSNKIK 109
Query: 195 VAVCSTSNEKAVTAIVSFLLGPERAEKIQI---FAGDVVPRK----KPDPAIYTLAASTL 247
+A+ S S GP EK+ + F P + KP P I+ AA +
Sbjct: 110 IALASASKN-----------GPFLLEKMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAV 158
Query: 248 GVDPSSCVVVEDSTIGLAAAKAAG 271
GV PS + +EDS G+ A K +G
Sbjct: 159 GVAPSESIGLEDSQAGIQAIKDSG 182
>sp|Q2L1W2|PHNX_BORA1 Phosphonoacetaldehyde hydrolase OS=Bordetella avium (strain 197N)
GN=phnX PE=3 SV=1
Length = 280
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 23/123 (18%)
Query: 170 IEKKLLPLR-----------PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPER 218
I ++ LP++ PG + + + E+G+KV CS + ++ ER
Sbjct: 97 IYERFLPMQLEKVAEYSDVIPGALQTLREIRERGLKVGSCSGYPASVMRRVL------ER 150
Query: 219 A-----EKIQIFAGDVVPRKKPDPAIYTLAASTLGV-DPSSCVVVEDSTIGLAAAKAAGM 272
A E + A D VPR +P PA+ A LGV D ++CV V+D+ +G+ + AGM
Sbjct: 151 ALAGGLEIATVVASDQVPRARPAPAMALKNAVELGVADVAACVKVDDTGVGIEEGRRAGM 210
Query: 273 KCI 275
+
Sbjct: 211 WSV 213
>sp|Q7VWH8|PHNX_BORPE Phosphonoacetaldehyde hydrolase OS=Bordetella pertussis (strain
Tohama I / ATCC BAA-589 / NCTC 13251) GN=phnX PE=3 SV=1
Length = 276
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 99/248 (39%), Gaps = 42/248 (16%)
Query: 66 NVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIG 125
N + V AL+FD G LVD F D F GV + L +G
Sbjct: 2 NAMTLATLPVRLEALVFDWAGTLVDFGSFAPTKVFVDAFAR--FGV--QISLEQARGPMG 57
Query: 126 GGK-ERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLR------ 178
GK + + A N D +Q+ + T+ + I ++ LP++
Sbjct: 58 MGKWDHIRALCN----------DAAIARQYQEQFGRLPTDEDVTAIYERFLPMQLEKVAE 107
Query: 179 -----PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEK-----IQIFAGD 228
PG +L+ ++G+K+ CS + ++ ERAE+ + A D
Sbjct: 108 YSQPIPGAIELLHGLRQRGLKLGSCSGYPAAVMQRVL------ERAEREGLALDYVVASD 161
Query: 229 VVPRKKPDPAIYTLAASTLGV-DPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAE--- 284
VPR +P PA+ LG+ D + CV V+D+ G+ + AGM + S A
Sbjct: 162 DVPRSRPAPAMALRNVVELGIADVAGCVKVDDTAPGVEEGRRAGMWTVGLLLSGNAAGLS 221
Query: 285 -EDFLNAD 291
E FL+ D
Sbjct: 222 LEQFLSLD 229
>sp|Q7W7R1|PHNX_BORPA Phosphonoacetaldehyde hydrolase OS=Bordetella parapertussis (strain
12822 / ATCC BAA-587 / NCTC 13253) GN=phnX PE=3 SV=1
Length = 276
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 99/248 (39%), Gaps = 42/248 (16%)
Query: 66 NVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIG 125
N + V AL+FD G LVD F D F GV + L +G
Sbjct: 2 NAMTLATLPVRLEALVFDWAGTLVDFGSFAPTKVFVDAFAR--FGV--QISLEQARGPMG 57
Query: 126 GGK-ERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLR------ 178
GK + + A N D +Q+ + T+ + I ++ LP++
Sbjct: 58 MGKWDHIRALCN----------DAAIARQYQEQFGRLPTDEDVTAIYERFLPMQLEKVAE 107
Query: 179 -----PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEK-----IQIFAGD 228
PG +L+ ++G+K+ CS + ++ ERAE+ + A D
Sbjct: 108 YSQPIPGAIELLHGLRQRGLKLGSCSGYPAAVMQRVL------ERAEREGLALDYVVASD 161
Query: 229 VVPRKKPDPAIYTLAASTLGV-DPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAE--- 284
VPR +P PA+ LG+ D + CV V+D+ G+ + AGM + S A
Sbjct: 162 DVPRSRPAPAMALRNVVELGIADVAGCVKVDDTAPGVEEGRRAGMWTVGLLLSGNAAGLS 221
Query: 285 -EDFLNAD 291
E FL+ D
Sbjct: 222 LEQFLSLD 229
>sp|Q7WL48|PHNX_BORBR Phosphonoacetaldehyde hydrolase OS=Bordetella bronchiseptica
(strain ATCC BAA-588 / NCTC 13252 / RB50) GN=phnX PE=3
SV=1
Length = 276
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 99/248 (39%), Gaps = 42/248 (16%)
Query: 66 NVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIG 125
N + V AL+FD G LVD F D F GV + L +G
Sbjct: 2 NAMTLATLPVRLEALVFDWAGTLVDFGSFAPTKVFVDAFAR--FGV--QISLEQARGPMG 57
Query: 126 GGK-ERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLR------ 178
GK + + A N D +Q+ + T+ + I ++ LP++
Sbjct: 58 MGKWDHIRALCN----------DAAIARQYQEQFGRLPTDEDVTAIYERFLPMQLEKVAE 107
Query: 179 -----PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEK-----IQIFAGD 228
PG +L+ ++G+K+ CS + ++ ERAE+ + A D
Sbjct: 108 YSQPIPGAIELLHGLRQRGLKLGSCSGYPAAVMQRVL------ERAEREGLALDYVVASD 161
Query: 229 VVPRKKPDPAIYTLAASTLGV-DPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAE--- 284
VPR +P PA+ LG+ D + CV V+D+ G+ + AGM + S A
Sbjct: 162 DVPRSRPAPAMALRNVVELGIADVAGCVKVDDTAPGVEEGRRAGMWTVGLLLSGNAAGLS 221
Query: 285 -EDFLNAD 291
E FL+ D
Sbjct: 222 LEQFLSLD 229
>sp|Q8P8H3|GPH_XANCP Phosphoglycolate phosphatase OS=Xanthomonas campestris pv.
campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
GN=gph PE=3 SV=1
Length = 221
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 80/211 (37%), Gaps = 18/211 (8%)
Query: 76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYF 135
P A+LFD DG L+D+ D + N E+ L L + K G + + F
Sbjct: 3 FPRAVLFDLDGTLLDSAPD-MLATVNAMLSERGLPCITLAQLRPVVSK--GSRAMLAVAF 59
Query: 136 NKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKV 195
D R+ + KR L + L GV ++ + + G
Sbjct: 60 AHL--------DAAAREALVPEFLKRYEALLGTQAQ-----LFDGVEVMLQRLEQAGCVW 106
Query: 196 AVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCV 255
+ + E I+ L +R + GD + +KP P +AA +GV + CV
Sbjct: 107 GIVTNKPEYLAQLILPQLGWQQRCAVL--IGGDTLAERKPHPLPLLVAADRIGVAATQCV 164
Query: 256 VVEDSTIGLAAAKAAGMKCIVTKSSYTAEED 286
V D + AA+AAGM + Y +D
Sbjct: 165 YVGDDERDILAARAAGMPSVAALWGYRLGDD 195
>sp|Q4UVL3|GPH_XANC8 Phosphoglycolate phosphatase OS=Xanthomonas campestris pv.
campestris (strain 8004) GN=XC_1847 PE=3 SV=1
Length = 221
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 80/211 (37%), Gaps = 18/211 (8%)
Query: 76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYF 135
P A+LFD DG L+D+ D + N E+ L L + K G + + F
Sbjct: 3 FPRAVLFDLDGTLLDSAPD-MLATVNAMLSERGLPCITLAQLRPVVSK--GSRAMLAVAF 59
Query: 136 NKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKV 195
D R+ + KR L + L GV ++ + + G
Sbjct: 60 AHL--------DAAAREALVPEFLKRYEALLGTQAQ-----LFDGVEVMLQRLEQAGCVW 106
Query: 196 AVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCV 255
+ + E I+ L +R + GD + +KP P +AA +GV + CV
Sbjct: 107 GIVTNKPEYLAQLILPQLGWQQRCAVL--IGGDTLAERKPHPLPLLVAADRIGVAATQCV 164
Query: 256 VVEDSTIGLAAAKAAGMKCIVTKSSYTAEED 286
V D + AA+AAGM + Y +D
Sbjct: 165 YVGDDERDILAARAAGMPSVAALWGYRLGDD 195
>sp|Q98ML8|GPH_RHILO Phosphoglycolate phosphatase OS=Rhizobium loti (strain MAFF303099)
GN=gph PE=3 SV=1
Length = 227
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 85/207 (41%), Gaps = 22/207 (10%)
Query: 80 LLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTG 139
++FD DG L+DT D S N + EL VD G +G G M
Sbjct: 6 IVFDLDGTLIDTAPDL-LDSLNHSLAASELTA---VDEAGFRRFVGHGGRVMI------- 54
Query: 140 WPEKAPSDEEERKQFIASLHKRKTELFMVL----IEKKLLPLRPGVAKLIDQALEKGVKV 195
E+A + +++ + H R +LF+ I K P PGV + I + + G +
Sbjct: 55 --ERAHA--AQQRSLDVAEHDRLLKLFLDHYTDNIPGKSRPY-PGVIEAIARFEKAGYLL 109
Query: 196 AVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCV 255
A+C+ E A++ LG R I D +KPDP T G D +
Sbjct: 110 AICTNKYEANSLALIE-ALGLTR-HFAAIAGQDTFAFRKPDPRHLTETIRLAGGDAHRAL 167
Query: 256 VVEDSTIGLAAAKAAGMKCIVTKSSYT 282
+V DS + AKAAG+ + YT
Sbjct: 168 MVGDSQTDIDTAKAAGIPVVAVDFGYT 194
>sp|P42510|GPH_PSESS Probable phosphoglycolate phosphatase (Fragment) OS=Pseudomonas
syringae pv. savastanoi GN=gph PE=3 SV=1
Length = 160
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 192 GVKVAVCSTSNEKAVTAIVSFL-LGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVD 250
GV++A+ + E+ V ++ + LG R + I GD +P+KKPDPA GV
Sbjct: 5 GVEMALITNKPERFVAPLLDEMKLG--RFFR-WIIGGDTMPQKKPDPAALFFVMKMAGVP 61
Query: 251 PSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYT 282
S + V DS + AAKAAG+ C+ Y
Sbjct: 62 ASQALFVGDSRSDVQAAKAAGVACVALSYGYN 93
>sp|Q7NA60|GPH_PHOLL Phosphoglycolate phosphatase OS=Photorhabdus luminescens subsp.
laumondii (strain TT01) GN=plu0085 PE=3 SV=1
Length = 234
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 84/227 (37%), Gaps = 32/227 (14%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
A+ FD DG LVD+ G + + K L GKER+ A+
Sbjct: 11 AIAFDLDGTLVDS-AGGLADALDQALLAKGLPAA--------------GKERVAAWVGNG 55
Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIE------KKLLP-LRPGVAKLIDQALEK 191
+ R + A LHK ELF E +L P ++ +A+L L
Sbjct: 56 ADIMVERALTWARTKLTAQLHKETRELFDRFYETTVTTGSQLFPEVKVTLAELAKHNLPM 115
Query: 192 GVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQ-IFAGDVVPRKKPDPAIYTLAASTLGVD 250
G+ K I L + +E + GD V KKP PA L T G+
Sbjct: 116 GI-------ITNKPTPFIAPLLASLDISEYFSLVLGGDDVKEKKPHPAPIYLTMGTFGLR 168
Query: 251 PSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCI 297
+ V DS + AA+AAG C+ Y E ++ DCI
Sbjct: 169 KEELLFVGDSRNDILAAQAAGCPCVGLTYGYNYGESIALSNP--DCI 213
>sp|Q9A5Z2|GPH_CAUCR Phosphoglycolate phosphatase OS=Caulobacter crescentus (strain ATCC
19089 / CB15) GN=gph PE=3 SV=1
Length = 237
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 93/223 (41%), Gaps = 17/223 (7%)
Query: 82 FDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIG-GGKERMTAYFNKTGW 140
FD DG LVDT D + N ++ L D+ L +G G + + F G
Sbjct: 14 FDLDGTLVDTAPD-LVGALNIILAQESLPPLPFDDVR---LMVGRGARALLERGFAAAG- 68
Query: 141 PEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCST 200
AP D E+ + +R ++++ I + P PGV +++ G K+ VC+
Sbjct: 69 ---APLDAEQAPALV----QRFIDVYLARIADESAPF-PGVVEVLSDLKTAGAKLVVCTN 120
Query: 201 SNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDS 260
TA++ + E + D+ P KPD A + +G D S V++ DS
Sbjct: 121 KLTNLSTALLDAVALSPFFEA--VIGADLAPAAKPDGRHVAAAVAAVGGDVSRAVMIGDS 178
Query: 261 TIGLAAAKAAGMKCIVTKSSYTAEE-DFLNADAVFDCIGDPPE 302
A+ AG+ ++ YT E + L AD V D P+
Sbjct: 179 VNDALGARNAGVPGVLVSFGYTEEPVETLGADLVIHSFLDVPK 221
>sp|Q4FPT7|GPH_PSYA2 Phosphoglycolate phosphatase OS=Psychrobacter arcticus (strain DSM
17307 / 273-4) GN=Psyc_2124 PE=3 SV=1
Length = 230
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 8/117 (6%)
Query: 185 IDQALEK----GVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIY 240
+D L+K G K+A+ + + V I+ F + ++ GD +P KKPDPA
Sbjct: 99 VDSGLKKLKAAGFKLALVTNKPIRFVPKILQFFGWHDIFS--EVLGGDSLPTKKPDPAPL 156
Query: 241 TLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF--LNADAVFD 295
L ++P+ V++ DS + A + A M + Y +D LN FD
Sbjct: 157 LHVCEVLNINPAQAVMIGDSINDILAGQNANMDTLGLSYGYNYGQDIRQLNPTEAFD 213
>sp|Q4QMY0|GPH_HAEI8 Phosphoglycolate phosphatase OS=Haemophilus influenzae (strain
86-028NP) GN=NTHI0697 PE=3 SV=1
Length = 224
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 89/228 (39%), Gaps = 36/228 (15%)
Query: 82 FDCDGVLVDTEKDGHRISFNDTFKE-------KELGVTWDVDLYGELLKIGGGKERMTAY 134
FD DG LV++ D +S N E +EL +TW IG G + A
Sbjct: 10 FDLDGTLVNSLPD-LALSVNSALAEFNLPKAPEELVLTW----------IGNGAPVLIA- 57
Query: 135 FNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLP---LRPGVAKLIDQALEK 191
W +K + K + K+ TE F + L L P V + ++ EK
Sbjct: 58 -RALDWAKK-----QTGKVLTETEVKQVTERFNFYYGENLCNVSRLYPNVKETLETLKEK 111
Query: 192 GVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDP 251
G +AV + + V +++ G + ++ G +P KP PA G +P
Sbjct: 112 GYVLAVVTNKPTRHVQPVLA-AFGIDHLFS-EMLGGQSLPAIKPHPAPLYYLCGKFGFEP 169
Query: 252 SSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFL----NADAVFD 295
+ V DS + AA AAG C V +Y + N D VFD
Sbjct: 170 RQVLFVGDSKNDIIAAHAAG--CAVVGLTYGYNYNIPITESNPDWVFD 215
>sp|P31467|YIEH_ECOLI 6-phosphogluconate phosphatase OS=Escherichia coli (strain K12)
GN=yieH PE=1 SV=1
Length = 221
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 84/210 (40%), Gaps = 49/210 (23%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
A+ FDCDG LVD+E R ++ F+E G+T D E + F
Sbjct: 6 AVFFDCDGTLVDSEVICSR-AYVTMFQE--FGITLD-------------PEEVFKRFKGV 49
Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALE-------- 190
E E +A KTE V R VA+L D LE
Sbjct: 50 KLYEIIDIVSLEHGVTLA-----KTEAEHVY--------RAEVARLFDSELEAIEGAGAL 96
Query: 191 -KGVKVAVCSTSN------EKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLA 243
+ +C SN + ++ + P++ +F+G + R KPDPA+ A
Sbjct: 97 LSAITAPMCVVSNGPNNKMQHSMGKLNMLHYFPDK-----LFSGYDIQRWKPDPALMFHA 151
Query: 244 ASTLGVDPSSCVVVEDSTIGLAAAKAAGMK 273
A + V+ +C++V+DS G + AGM+
Sbjct: 152 AKAMNVNVENCILVDDSVAGAQSGIDAGME 181
>sp|P35924|YFGS_LACCA Uncharacterized protein in fgs 3'region OS=Lactobacillus casei PE=3
SV=1
Length = 215
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPA 238
PG K + + G ++A+ ++S + V +++ +R + I G V KPDP
Sbjct: 88 PGADKTLQTLDQMGYRLALATSSAKHYVDVVLAATGWVKRFDPI--LTGSDVTAHKPDPE 145
Query: 239 IYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIV 276
IY + + L P+ +VVED+ +G+AAA+ AG+ ++
Sbjct: 146 IYHVMKTKLPETPA--IVVEDTHVGVAAAEGAGLPVVM 181
>sp|O14165|YDX1_SCHPO Uncharacterized protein C4C5.01 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC4C5.01 PE=3 SV=2
Length = 249
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 87/215 (40%), Gaps = 38/215 (17%)
Query: 79 ALLFDCDGVLVDTEKDGHRIS--FNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN 136
A LFD DG+LVD+E + + D + + L ++ + G + G ++ ++
Sbjct: 10 ACLFDMDGLLVDSETIYTKTTNLILDRYGKDPLPISVKAQMMG---RPGSAAAKVVIDWS 66
Query: 137 KTGWPEKAPSDEEE--RKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVK 194
+ DE++ R +F +SL P+ PG LI+ G+
Sbjct: 67 NIPMTPQQFVDEQQVIRAKFWSSLK----------------PM-PGAESLINNLSNHGID 109
Query: 195 VAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGD---VVP-RKKPDPAIYTLAASTL--- 247
+ + ++SN + L + GD + P R KP P I+ + +
Sbjct: 110 IGLATSSNTANYNMKTAHLKHIFEKFGKNVITGDNPSIAPGRGKPFPDIWLKVLNLINES 169
Query: 248 -------GVDPSSCVVVEDSTIGLAAAKAAGMKCI 275
+ PS C+ EDS G+ +AKAAGM I
Sbjct: 170 RKQRGLKALTPSQCIAFEDSIPGVKSAKAAGMHVI 204
>sp|Q9JTP5|GPH_NEIMA Phosphoglycolate phosphatase OS=Neisseria meningitidis serogroup A
/ serotype 4A (strain Z2491) GN=gph PE=3 SV=1
Length = 235
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 192 GVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQ-IFAGDVVPRKKPDPAIYTLAASTLGVD 250
G+ +AV + NE ++ L A+ I GD +P KKP P AA LG+D
Sbjct: 112 GIPLAVITNKNEILAAELLKQL---GLADYFSLILGGDSLPEKKPSPLPLRHAAEVLGID 168
Query: 251 PSSCVVVEDSTIGLAAAKAAG 271
++ V+V DS + AAKAAG
Sbjct: 169 VANMVMVGDSRNDIIAAKAAG 189
>sp|P0A8Y4|YIHX_SHIFL Alpha-D-glucose-1-phosphate phosphatase YihX OS=Shigella flexneri
GN=yihX PE=3 SV=1
Length = 199
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 11/119 (9%)
Query: 174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKI-----QIFAGD 228
+ LRP V ++ + E+G +V V S +N T PE +I I+
Sbjct: 82 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTT------FWPEEYPEIRDAADHIYLSQ 135
Query: 229 VVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF 287
+ +KP+ IY G PS V +D+ + A G+ I+ K T + F
Sbjct: 136 DLGMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKTTIPDYF 194
>sp|P0A8Y3|YIHX_ECOLI Alpha-D-glucose-1-phosphate phosphatase YihX OS=Escherichia coli
(strain K12) GN=yihX PE=1 SV=1
Length = 199
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 11/119 (9%)
Query: 174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKI-----QIFAGD 228
+ LRP V ++ + E+G +V V S +N T PE +I I+
Sbjct: 82 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTT------FWPEEYPEIRDAADHIYLSQ 135
Query: 229 VVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF 287
+ +KP+ IY G PS V +D+ + A G+ I+ K T + F
Sbjct: 136 DLGMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKTTIPDYF 194
>sp|P44755|GPH_HAEIN Phosphoglycolate phosphatase OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=gph PE=3 SV=1
Length = 224
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 88/228 (38%), Gaps = 36/228 (15%)
Query: 82 FDCDGVLVDTEKDGHRISFNDTFKE-------KELGVTWDVDLYGELLKIGGGKERMTAY 134
FD DG LV++ D +S N E +EL +TW IG G + A
Sbjct: 10 FDLDGTLVNSLPD-LALSVNSALAEFNLPQAPEELVLTW----------IGNGAPVLIA- 57
Query: 135 FNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLP---LRPGVAKLIDQALEK 191
W +K + K + K+ TE F + L L P V + ++ EK
Sbjct: 58 -RALDWAKK-----QTGKVLTETEVKQVTERFNFYYGENLCNVSRLYPNVKETLEILKEK 111
Query: 192 GVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDP 251
G +AV + + V +++ G + ++ G +P KP PA G +P
Sbjct: 112 GYVLAVVTNKPTRHVQPVLA-AFGIDHLFS-EMLGGQSLPAIKPHPAPLYYLCGKFGFEP 169
Query: 252 SSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFL----NADAVFD 295
+ V DS + A AAG C V +Y + N D VFD
Sbjct: 170 RQVLFVGDSKNDIIAGHAAG--CAVVGLTYGYNYNIPIRESNPDWVFD 215
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.130 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,987,614
Number of Sequences: 539616
Number of extensions: 4665915
Number of successful extensions: 14181
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 101
Number of HSP's that attempted gapping in prelim test: 13931
Number of HSP's gapped (non-prelim): 270
length of query: 320
length of database: 191,569,459
effective HSP length: 117
effective length of query: 203
effective length of database: 128,434,387
effective search space: 26072180561
effective search space used: 26072180561
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)