Query 020875
Match_columns 320
No_of_seqs 206 out of 1997
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 05:51:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020875.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020875hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK05442 malate dehydrogenase; 100.0 3.7E-72 8.1E-77 516.9 32.1 313 1-318 1-313 (326)
2 TIGR01759 MalateDH-SF1 malate 100.0 7.6E-72 1.6E-76 514.3 32.8 312 3-318 1-314 (323)
3 TIGR01757 Malate-DH_plant mala 100.0 1.5E-70 3.2E-75 512.8 32.4 311 3-318 42-355 (387)
4 COG0039 Mdh Malate/lactate deh 100.0 9.5E-70 2.1E-74 491.0 29.5 294 6-318 1-298 (313)
5 PLN00112 malate dehydrogenase 100.0 1.9E-69 4.2E-74 512.0 31.9 307 4-318 99-411 (444)
6 cd01338 MDH_choloroplast_like 100.0 7.5E-69 1.6E-73 495.0 32.0 310 4-318 1-311 (322)
7 cd00704 MDH Malate dehydrogena 100.0 2.6E-68 5.6E-73 491.7 30.3 307 6-318 1-313 (323)
8 cd01336 MDH_cytoplasmic_cytoso 100.0 6.6E-68 1.4E-72 490.1 31.0 310 4-318 1-315 (325)
9 TIGR01758 MDH_euk_cyt malate d 100.0 3.4E-67 7.5E-72 484.4 30.8 308 7-318 1-313 (324)
10 cd05295 MDH_like Malate dehydr 100.0 2E-66 4.4E-71 491.1 30.6 307 4-318 122-441 (452)
11 cd05290 LDH_3 A subgroup of L- 100.0 7.3E-66 1.6E-70 472.2 30.4 292 7-318 1-300 (307)
12 TIGR01771 L-LDH-NAD L-lactate 100.0 1.2E-64 2.5E-69 463.4 29.2 289 10-318 1-295 (299)
13 PRK00066 ldh L-lactate dehydro 100.0 1.3E-63 2.7E-68 460.0 31.3 297 1-318 2-304 (315)
14 PLN02602 lactate dehydrogenase 100.0 1.7E-63 3.6E-68 462.7 31.1 292 6-318 38-339 (350)
15 cd05293 LDH_1 A subgroup of L- 100.0 5.8E-63 1.3E-67 454.4 32.5 295 4-318 2-304 (312)
16 PLN00135 malate dehydrogenase 100.0 3E-63 6.5E-68 453.7 29.4 291 26-318 3-295 (309)
17 KOG1495 Lactate dehydrogenase 100.0 1.9E-63 4.1E-68 429.6 25.7 292 5-318 20-321 (332)
18 TIGR01756 LDH_protist lactate 100.0 1.2E-62 2.7E-67 450.9 28.2 291 23-318 3-299 (313)
19 cd05291 HicDH_like L-2-hydroxy 100.0 8.3E-62 1.8E-66 447.8 30.9 293 6-318 1-298 (306)
20 cd00300 LDH_like L-lactate deh 100.0 2.8E-61 6E-66 442.6 31.1 290 8-318 1-293 (300)
21 KOG1496 Malate dehydrogenase [ 100.0 7.5E-61 1.6E-65 407.1 21.6 314 4-317 3-316 (332)
22 PTZ00117 malate dehydrogenase; 100.0 5.7E-59 1.2E-63 430.3 32.3 293 4-318 4-305 (319)
23 cd05292 LDH_2 A subgroup of L- 100.0 4.2E-59 9.2E-64 429.7 30.6 292 6-318 1-299 (308)
24 PTZ00082 L-lactate dehydrogena 100.0 9.6E-59 2.1E-63 428.3 32.3 296 1-318 1-311 (321)
25 TIGR01763 MalateDH_bact malate 100.0 8.4E-59 1.8E-63 426.4 30.2 290 5-318 1-296 (305)
26 cd01337 MDH_glyoxysomal_mitoch 100.0 5.3E-59 1.2E-63 425.9 28.1 283 6-318 1-297 (310)
27 cd05294 LDH-like_MDH_nadp A la 100.0 1.1E-58 2.5E-63 426.5 30.0 295 6-318 1-300 (309)
28 TIGR01772 MDH_euk_gproteo mala 100.0 9.5E-59 2.1E-63 425.0 28.3 283 7-318 1-297 (312)
29 PTZ00325 malate dehydrogenase; 100.0 1.2E-56 2.6E-61 412.2 30.3 285 4-318 7-304 (321)
30 PLN00106 malate dehydrogenase 100.0 3.4E-56 7.4E-61 409.6 29.5 288 4-318 17-315 (323)
31 PRK06223 malate dehydrogenase; 100.0 3.6E-55 7.9E-60 404.5 31.3 290 5-318 2-297 (307)
32 cd01339 LDH-like_MDH L-lactate 100.0 3.4E-55 7.3E-60 403.1 30.9 287 8-318 1-293 (300)
33 PRK05086 malate dehydrogenase; 100.0 9.3E-55 2E-59 400.6 29.3 283 6-318 1-297 (312)
34 cd00650 LDH_MDH_like NAD-depen 100.0 7.1E-50 1.5E-54 361.3 28.3 252 8-318 1-256 (263)
35 KOG1494 NAD-dependent malate d 100.0 2E-44 4.4E-49 313.0 20.9 285 4-315 27-323 (345)
36 PF02866 Ldh_1_C: lactate/mala 100.0 4.1E-36 8.9E-41 255.1 12.2 155 157-318 1-161 (174)
37 PF00056 Ldh_1_N: lactate/mala 100.0 2E-31 4.4E-36 218.2 15.0 141 6-155 1-141 (141)
38 cd05298 GH4_GlvA_pagL_like Gly 99.9 1.1E-23 2.4E-28 201.4 26.1 285 6-313 1-380 (437)
39 cd05197 GH4_glycoside_hydrolas 99.9 8.8E-24 1.9E-28 201.8 23.7 185 6-211 1-211 (425)
40 PRK15076 alpha-galactosidase; 99.9 7E-23 1.5E-27 196.3 23.5 282 5-313 1-371 (431)
41 cd05296 GH4_P_beta_glucosidase 99.9 1.9E-21 4.1E-26 185.5 25.0 282 6-313 1-366 (419)
42 cd05297 GH4_alpha_glucosidase_ 99.9 1.1E-19 2.5E-24 174.3 24.4 178 6-201 1-206 (423)
43 COG1486 CelF Alpha-galactosida 99.8 2.8E-18 6.1E-23 161.1 21.3 287 4-314 2-384 (442)
44 PF02056 Glyco_hydro_4: Family 99.7 3.5E-16 7.5E-21 132.2 12.4 156 7-174 1-183 (183)
45 KOG1502 Flavonol reductase/cin 99.5 5.8E-13 1.3E-17 121.5 11.8 170 4-186 5-196 (327)
46 COG1087 GalE UDP-glucose 4-epi 99.3 1.4E-11 3.1E-16 110.1 9.8 167 6-188 1-176 (329)
47 PRK15181 Vi polysaccharide bio 99.3 1.3E-11 2.8E-16 116.1 9.2 173 4-189 14-200 (348)
48 PLN02166 dTDP-glucose 4,6-dehy 99.2 9.2E-11 2E-15 113.4 12.9 170 3-188 118-297 (436)
49 PLN02650 dihydroflavonol-4-red 99.2 6.3E-11 1.4E-15 111.4 10.0 175 1-188 1-197 (351)
50 PF01073 3Beta_HSD: 3-beta hyd 99.2 5.1E-11 1.1E-15 108.7 8.5 168 9-188 1-185 (280)
51 PLN02206 UDP-glucuronate decar 99.2 1.7E-10 3.7E-15 111.7 12.2 170 2-188 116-296 (442)
52 PLN02695 GDP-D-mannose-3',5'-e 99.2 7.6E-11 1.7E-15 111.8 8.5 174 1-189 17-202 (370)
53 PLN02427 UDP-apiose/xylose syn 99.2 1.4E-10 2.9E-15 110.6 10.0 171 4-188 13-216 (386)
54 PLN00198 anthocyanidin reducta 99.2 5.3E-10 1.1E-14 104.5 13.5 174 4-188 8-202 (338)
55 PLN02572 UDP-sulfoquinovose sy 99.1 2.1E-10 4.5E-15 111.3 10.6 178 4-189 46-263 (442)
56 PF02719 Polysacc_synt_2: Poly 99.1 3.2E-10 6.9E-15 102.6 9.6 166 8-197 1-183 (293)
57 PLN02662 cinnamyl-alcohol dehy 99.1 7.6E-10 1.6E-14 102.4 12.0 173 4-188 3-196 (322)
58 COG0451 WcaG Nucleoside-diphos 99.1 6.7E-10 1.5E-14 102.0 10.6 169 6-191 1-179 (314)
59 PLN02989 cinnamyl-alcohol dehy 99.1 7E-10 1.5E-14 103.0 10.7 177 1-188 1-198 (325)
60 TIGR02622 CDP_4_6_dhtase CDP-g 99.1 1.4E-09 3E-14 102.2 12.1 173 5-188 4-193 (349)
61 PLN02986 cinnamyl-alcohol dehy 99.1 1.6E-09 3.5E-14 100.5 12.4 174 1-187 1-196 (322)
62 PLN02214 cinnamoyl-CoA reducta 99.1 6.2E-10 1.3E-14 104.4 9.3 171 5-188 10-195 (342)
63 PRK08125 bifunctional UDP-gluc 99.0 1.1E-09 2.4E-14 111.4 10.7 169 4-188 314-497 (660)
64 PRK11908 NAD-dependent epimera 99.0 7.1E-10 1.5E-14 104.0 8.6 167 5-188 1-183 (347)
65 TIGR03589 PseB UDP-N-acetylglu 99.0 2.2E-09 4.9E-14 99.9 11.1 171 5-197 4-180 (324)
66 TIGR01472 gmd GDP-mannose 4,6- 99.0 1.1E-09 2.3E-14 102.7 8.8 173 6-187 1-189 (343)
67 PLN02896 cinnamyl-alcohol dehy 99.0 3.7E-09 8.1E-14 99.5 12.4 176 4-189 9-211 (353)
68 PRK09987 dTDP-4-dehydrorhamnos 99.0 1E-09 2.2E-14 101.0 7.7 157 6-195 1-165 (299)
69 PRK11150 rfaD ADP-L-glycero-D- 99.0 9.3E-09 2E-13 94.7 13.4 163 8-189 2-175 (308)
70 PRK10217 dTDP-glucose 4,6-dehy 99.0 4.4E-09 9.6E-14 98.8 10.9 176 5-189 1-195 (355)
71 KOG1429 dTDP-glucose 4-6-dehyd 99.0 1.1E-09 2.5E-14 96.9 6.4 172 3-189 25-205 (350)
72 PRK10084 dTDP-glucose 4,6 dehy 98.9 3.6E-09 7.9E-14 99.3 10.0 174 6-188 1-201 (352)
73 COG1086 Predicted nucleoside-d 98.9 9.7E-09 2.1E-13 99.2 12.2 166 5-198 250-432 (588)
74 PLN02260 probable rhamnose bio 98.9 5.2E-09 1.1E-13 106.7 10.1 177 4-189 5-194 (668)
75 PLN02583 cinnamoyl-CoA reducta 98.9 7.4E-09 1.6E-13 95.2 10.1 175 4-188 5-197 (297)
76 COG1004 Ugd Predicted UDP-gluc 98.9 5.2E-08 1.1E-12 90.7 15.1 115 6-140 1-130 (414)
77 PLN02778 3,5-epimerase/4-reduc 98.9 1.6E-08 3.5E-13 93.1 11.3 140 5-175 9-162 (298)
78 PLN02240 UDP-glucose 4-epimera 98.9 6.5E-09 1.4E-13 97.5 8.6 177 1-188 1-191 (352)
79 TIGR03466 HpnA hopanoid-associ 98.9 1.1E-08 2.4E-13 94.6 10.0 168 6-188 1-175 (328)
80 TIGR01181 dTDP_gluc_dehyt dTDP 98.9 2.6E-08 5.6E-13 91.5 11.8 174 7-188 1-184 (317)
81 PLN02653 GDP-mannose 4,6-dehyd 98.8 1.6E-08 3.5E-13 94.6 10.5 175 4-187 5-195 (340)
82 PLN02686 cinnamoyl-CoA reducta 98.8 4.7E-09 1E-13 99.4 6.8 172 4-188 52-250 (367)
83 CHL00194 ycf39 Ycf39; Provisio 98.8 2E-08 4.3E-13 93.2 10.4 109 6-132 1-110 (317)
84 KOG1430 C-3 sterol dehydrogena 98.8 1.2E-08 2.6E-13 95.0 8.3 178 4-191 3-189 (361)
85 PRK10675 UDP-galactose-4-epime 98.8 4.1E-08 9E-13 91.5 11.4 172 6-188 1-184 (338)
86 PF01370 Epimerase: NAD depend 98.7 2.2E-08 4.8E-13 88.1 7.1 166 8-188 1-174 (236)
87 PF03721 UDPG_MGDP_dh_N: UDP-g 98.7 1.4E-07 3.1E-12 80.7 10.9 113 6-138 1-128 (185)
88 PRK06194 hypothetical protein; 98.7 2.2E-07 4.8E-12 84.6 12.2 162 4-183 5-190 (287)
89 PF02737 3HCDH_N: 3-hydroxyacy 98.6 2E-07 4.4E-12 79.4 9.9 103 7-136 1-117 (180)
90 COG1088 RfbB dTDP-D-glucose 4, 98.6 3E-07 6.6E-12 82.4 10.3 173 6-186 1-184 (340)
91 PRK09135 pteridine reductase; 98.6 2.7E-07 5.8E-12 81.8 9.9 153 4-173 5-175 (249)
92 PRK05865 hypothetical protein; 98.6 2.5E-07 5.4E-12 95.5 10.9 105 6-134 1-105 (854)
93 PLN02725 GDP-4-keto-6-deoxyman 98.6 1.5E-07 3.3E-12 86.3 8.4 151 9-188 1-164 (306)
94 TIGR01214 rmlD dTDP-4-dehydror 98.6 2.2E-07 4.9E-12 84.5 8.9 147 7-189 1-155 (287)
95 COG1091 RfbD dTDP-4-dehydrorha 98.6 4.4E-07 9.6E-12 81.8 10.4 159 6-200 1-167 (281)
96 PLN03209 translocon at the inn 98.5 5.1E-07 1.1E-11 89.0 10.8 116 6-132 81-208 (576)
97 KOG1371 UDP-glucose 4-epimeras 98.5 2.8E-07 6E-12 83.6 8.2 173 5-188 2-187 (343)
98 PRK07819 3-hydroxybutyryl-CoA 98.5 1.1E-06 2.5E-11 80.4 12.4 109 1-136 1-124 (286)
99 TIGR01777 yfcH conserved hypot 98.5 2.9E-07 6.2E-12 83.7 8.3 97 8-121 1-101 (292)
100 PRK07066 3-hydroxybutyryl-CoA 98.5 1.4E-06 2.9E-11 80.8 12.8 148 5-179 7-182 (321)
101 PRK07067 sorbitol dehydrogenas 98.5 2.2E-06 4.8E-11 76.7 13.2 158 3-180 4-177 (257)
102 PF01210 NAD_Gly3P_dh_N: NAD-d 98.5 6.5E-07 1.4E-11 74.6 9.0 97 7-131 1-103 (157)
103 PRK12320 hypothetical protein; 98.5 4.1E-07 9E-12 92.0 8.7 100 6-131 1-101 (699)
104 TIGR02197 heptose_epim ADP-L-g 98.5 8.2E-07 1.8E-11 81.7 10.0 166 8-189 1-175 (314)
105 PF13460 NAD_binding_10: NADH( 98.5 3.9E-07 8.5E-12 77.3 6.9 98 8-132 1-98 (183)
106 PRK13394 3-hydroxybutyrate deh 98.5 2.7E-06 5.9E-11 76.1 12.7 157 5-182 7-183 (262)
107 PRK07231 fabG 3-ketoacyl-(acyl 98.4 1.7E-06 3.7E-11 76.8 11.0 160 1-180 1-178 (251)
108 COG0240 GpsA Glycerol-3-phosph 98.4 6.2E-06 1.3E-10 75.7 14.5 110 5-144 1-123 (329)
109 PRK07201 short chain dehydroge 98.4 1E-06 2.2E-11 89.6 10.1 117 6-132 1-125 (657)
110 PRK12936 3-ketoacyl-(acyl-carr 98.4 3.4E-06 7.4E-11 74.6 12.3 161 2-182 3-178 (245)
111 PRK08293 3-hydroxybutyryl-CoA 98.4 3.8E-06 8.3E-11 76.9 12.7 106 5-136 3-123 (287)
112 PRK07806 short chain dehydroge 98.4 1.2E-06 2.7E-11 77.8 9.2 169 1-183 1-180 (248)
113 PRK07774 short chain dehydroge 98.4 3.3E-06 7.2E-11 75.0 11.9 157 3-182 4-181 (250)
114 PLN02657 3,8-divinyl protochlo 98.4 5.9E-07 1.3E-11 85.9 7.5 115 4-132 59-182 (390)
115 TIGR01915 npdG NADPH-dependent 98.4 4.7E-06 1E-10 73.3 12.4 103 6-135 1-105 (219)
116 PRK05717 oxidoreductase; Valid 98.4 1.8E-06 4E-11 77.2 10.0 150 6-173 11-176 (255)
117 PF04321 RmlD_sub_bind: RmlD s 98.4 3E-07 6.5E-12 84.2 4.8 156 6-196 1-163 (286)
118 PRK06180 short chain dehydroge 98.4 5.7E-06 1.2E-10 75.1 13.2 151 4-172 3-168 (277)
119 PRK07523 gluconate 5-dehydroge 98.4 5.9E-06 1.3E-10 73.8 12.9 157 5-181 10-184 (255)
120 PRK08278 short chain dehydroge 98.4 1.1E-05 2.4E-10 73.1 14.5 165 1-182 2-190 (273)
121 PRK06482 short chain dehydroge 98.4 4.6E-06 1E-10 75.5 12.0 149 6-172 3-166 (276)
122 PRK10538 malonic semialdehyde 98.4 4.5E-06 9.7E-11 74.4 11.7 155 6-180 1-171 (248)
123 COG2910 Putative NADH-flavin r 98.4 2.6E-06 5.6E-11 71.4 9.2 105 6-132 1-105 (211)
124 TIGR01179 galE UDP-glucose-4-e 98.4 1.4E-06 3E-11 80.3 8.5 169 7-188 1-180 (328)
125 COG4221 Short-chain alcohol de 98.4 1.5E-05 3.3E-10 69.9 14.4 161 1-183 1-180 (246)
126 PRK06500 short chain dehydroge 98.4 5.6E-06 1.2E-10 73.4 11.9 158 4-181 5-175 (249)
127 PRK08265 short chain dehydroge 98.3 8.5E-06 1.8E-10 73.2 13.0 160 4-183 5-177 (261)
128 PLN02253 xanthoxin dehydrogena 98.3 7.5E-06 1.6E-10 74.2 12.7 152 5-174 18-188 (280)
129 PRK05653 fabG 3-ketoacyl-(acyl 98.3 3.4E-06 7.4E-11 74.4 10.1 160 1-180 1-178 (246)
130 PRK12937 short chain dehydroge 98.3 9E-06 2E-10 71.9 12.4 162 1-181 1-178 (245)
131 COG1250 FadB 3-hydroxyacyl-CoA 98.3 4.6E-06 9.9E-11 76.4 10.6 145 5-176 3-178 (307)
132 COG0300 DltE Short-chain dehyd 98.3 8.1E-06 1.8E-10 73.3 11.9 171 3-197 4-195 (265)
133 PRK12746 short chain dehydroge 98.3 2.1E-05 4.6E-10 70.1 14.7 155 1-173 1-179 (254)
134 PLN02996 fatty acyl-CoA reduct 98.3 5.8E-06 1.3E-10 81.3 12.0 121 5-131 11-160 (491)
135 PRK08642 fabG 3-ketoacyl-(acyl 98.3 8.3E-06 1.8E-10 72.5 12.0 161 1-180 1-183 (253)
136 TIGR03325 BphB_TodD cis-2,3-di 98.3 3.8E-06 8.3E-11 75.5 9.8 155 1-173 1-174 (262)
137 PRK07856 short chain dehydroge 98.3 6.3E-06 1.4E-10 73.5 11.1 150 1-173 2-167 (252)
138 PRK07478 short chain dehydroge 98.3 2E-05 4.3E-10 70.3 14.3 161 1-182 2-183 (254)
139 PRK06138 short chain dehydroge 98.3 4.1E-06 9E-11 74.4 9.8 152 1-173 1-172 (252)
140 PRK07326 short chain dehydroge 98.3 8.6E-06 1.9E-10 71.7 11.5 122 3-133 4-141 (237)
141 PRK06935 2-deoxy-D-gluconate 3 98.3 8.4E-06 1.8E-10 73.0 11.2 155 4-181 14-188 (258)
142 PLN02353 probable UDP-glucose 98.3 1.5E-05 3.4E-10 77.7 13.8 124 5-137 1-134 (473)
143 PRK08267 short chain dehydroge 98.3 9.3E-06 2E-10 72.7 11.5 159 6-184 2-177 (260)
144 PRK06172 short chain dehydroge 98.3 1.5E-05 3.2E-10 71.1 12.6 157 4-182 6-183 (253)
145 PRK08264 short chain dehydroge 98.3 3E-06 6.4E-11 74.8 8.1 151 1-172 2-164 (238)
146 PRK06179 short chain dehydroge 98.3 7.1E-06 1.5E-10 73.9 10.6 147 1-173 1-164 (270)
147 PRK07666 fabG 3-ketoacyl-(acyl 98.3 1.4E-05 3.1E-10 70.5 12.4 156 5-180 7-180 (239)
148 PRK05808 3-hydroxybutyryl-CoA 98.3 1.3E-05 2.7E-10 73.3 12.3 105 5-136 3-121 (282)
149 PRK05875 short chain dehydroge 98.3 1.1E-05 2.5E-10 72.8 11.9 160 3-182 5-185 (276)
150 PRK05557 fabG 3-ketoacyl-(acyl 98.3 1.2E-05 2.6E-10 70.9 11.8 162 1-181 1-180 (248)
151 PRK12429 3-hydroxybutyrate deh 98.3 1.7E-05 3.7E-10 70.7 12.8 118 5-133 4-141 (258)
152 PRK12744 short chain dehydroge 98.3 2.3E-05 5E-10 70.1 13.6 159 4-181 7-184 (257)
153 PRK08643 acetoin reductase; Va 98.2 3.7E-05 8E-10 68.6 14.6 155 6-181 3-177 (256)
154 COG1090 Predicted nucleoside-d 98.2 1.1E-05 2.4E-10 71.8 10.9 161 8-198 1-180 (297)
155 PLN02260 probable rhamnose bio 98.2 9.8E-06 2.1E-10 82.8 12.1 135 4-171 379-529 (668)
156 PRK07102 short chain dehydroge 98.2 2.4E-05 5.2E-10 69.3 13.1 157 5-181 1-173 (243)
157 PRK07825 short chain dehydroge 98.2 2.2E-05 4.8E-10 70.9 13.1 159 1-182 1-176 (273)
158 PRK07814 short chain dehydroge 98.2 1.2E-05 2.7E-10 72.2 11.3 151 4-173 9-179 (263)
159 PRK07890 short chain dehydroge 98.2 6.1E-06 1.3E-10 73.7 9.1 154 1-172 1-172 (258)
160 PRK06128 oxidoreductase; Provi 98.2 2.6E-05 5.7E-10 71.7 13.4 158 5-180 55-229 (300)
161 PRK05993 short chain dehydroge 98.2 1.7E-05 3.7E-10 71.9 12.0 149 6-180 5-172 (277)
162 COG2085 Predicted dinucleotide 98.2 7.9E-05 1.7E-09 64.2 15.1 96 5-134 1-96 (211)
163 PRK06197 short chain dehydroge 98.2 8.8E-06 1.9E-10 75.0 10.0 158 5-173 16-197 (306)
164 PRK08263 short chain dehydroge 98.2 1E-05 2.2E-10 73.3 10.2 147 6-172 4-167 (275)
165 PRK06077 fabG 3-ketoacyl-(acyl 98.2 1.3E-05 2.9E-10 71.2 10.7 156 1-173 2-173 (252)
166 PRK12826 3-ketoacyl-(acyl-carr 98.2 8.6E-06 1.9E-10 72.2 9.5 117 5-132 6-142 (251)
167 PRK06171 sorbitol-6-phosphate 98.2 8.4E-06 1.8E-10 73.3 9.5 154 4-182 8-184 (266)
168 PRK06035 3-hydroxyacyl-CoA deh 98.2 2.5E-05 5.5E-10 71.6 12.8 104 6-136 4-124 (291)
169 PRK06398 aldose dehydrogenase; 98.2 1.9E-05 4.1E-10 70.9 11.7 149 4-173 5-163 (258)
170 PLN00141 Tic62-NAD(P)-related 98.2 3E-06 6.5E-11 75.8 6.4 113 4-132 16-132 (251)
171 PRK06550 fabG 3-ketoacyl-(acyl 98.2 2.2E-05 4.8E-10 69.1 11.9 154 1-182 1-166 (235)
172 PRK05565 fabG 3-ketoacyl-(acyl 98.2 2.3E-05 4.9E-10 69.3 11.8 124 1-133 1-143 (247)
173 PRK12828 short chain dehydroge 98.2 9.1E-06 2E-10 71.4 9.2 121 3-132 5-141 (239)
174 TIGR01832 kduD 2-deoxy-D-gluco 98.2 2.6E-05 5.7E-10 69.2 12.2 158 1-180 1-177 (248)
175 PRK07576 short chain dehydroge 98.2 1.1E-05 2.5E-10 72.6 10.0 157 4-180 8-181 (264)
176 PRK07069 short chain dehydroge 98.2 2.3E-05 5.1E-10 69.5 11.8 156 7-181 1-178 (251)
177 PRK06182 short chain dehydroge 98.2 4.4E-06 9.5E-11 75.6 7.2 114 5-132 3-133 (273)
178 PRK05866 short chain dehydroge 98.2 4E-05 8.7E-10 70.3 13.6 151 4-173 39-211 (293)
179 TIGR03026 NDP-sugDHase nucleot 98.2 4.5E-05 9.7E-10 73.5 14.5 106 6-131 1-120 (411)
180 PRK12829 short chain dehydroge 98.2 1.3E-05 2.8E-10 71.8 10.1 151 4-172 10-178 (264)
181 PRK12745 3-ketoacyl-(acyl-carr 98.2 3.5E-05 7.5E-10 68.7 12.7 151 6-173 3-179 (256)
182 PRK12823 benD 1,6-dihydroxycyc 98.2 1.3E-05 2.7E-10 71.8 9.9 146 5-173 8-174 (260)
183 PRK05884 short chain dehydroge 98.2 3.2E-05 7E-10 67.9 12.2 149 6-180 1-164 (223)
184 PRK07024 short chain dehydroge 98.2 1.7E-05 3.7E-10 71.0 10.7 149 5-173 2-170 (257)
185 PRK12935 acetoacetyl-CoA reduc 98.2 4.8E-05 1.1E-09 67.4 13.3 159 5-182 6-182 (247)
186 PRK08628 short chain dehydroge 98.1 4.1E-05 8.8E-10 68.4 12.9 158 2-180 4-177 (258)
187 PRK06463 fabG 3-ketoacyl-(acyl 98.1 1.9E-05 4.2E-10 70.5 10.5 154 4-181 6-177 (255)
188 PRK05786 fabG 3-ketoacyl-(acyl 98.1 1.2E-05 2.7E-10 70.8 9.1 124 1-133 1-137 (238)
189 PRK06701 short chain dehydroge 98.1 6.5E-05 1.4E-09 68.8 14.0 159 5-182 46-221 (290)
190 PRK12481 2-deoxy-D-gluconate 3 98.1 2.6E-05 5.7E-10 69.7 11.1 156 4-182 7-182 (251)
191 PRK05876 short chain dehydroge 98.1 3.9E-05 8.3E-10 69.7 12.3 149 5-172 6-174 (275)
192 PRK11154 fadJ multifunctional 98.1 3.7E-05 7.9E-10 79.0 13.5 146 6-180 310-489 (708)
193 PRK12939 short chain dehydroge 98.1 3.5E-05 7.5E-10 68.3 11.8 157 5-181 7-181 (250)
194 PRK06924 short chain dehydroge 98.1 9.6E-06 2.1E-10 72.1 8.2 159 6-183 2-183 (251)
195 PRK06124 gluconate 5-dehydroge 98.1 2.5E-05 5.5E-10 69.7 11.0 152 4-173 10-179 (256)
196 TIGR01963 PHB_DH 3-hydroxybuty 98.1 2.7E-05 5.8E-10 69.2 11.1 116 6-132 2-137 (255)
197 PRK08226 short chain dehydroge 98.1 3.4E-05 7.4E-10 69.1 11.8 157 4-180 5-179 (263)
198 PRK07060 short chain dehydroge 98.1 1.2E-05 2.6E-10 71.1 8.8 149 5-173 9-169 (245)
199 PRK06130 3-hydroxybutyryl-CoA 98.1 2.6E-05 5.5E-10 72.2 11.1 78 1-89 1-87 (311)
200 PRK08219 short chain dehydroge 98.1 1.7E-05 3.8E-10 69.2 9.5 115 5-133 3-130 (227)
201 PRK12384 sorbitol-6-phosphate 98.1 3.5E-05 7.7E-10 68.9 11.7 148 6-172 3-172 (259)
202 PRK07530 3-hydroxybutyryl-CoA 98.1 3.4E-05 7.5E-10 70.8 11.8 99 5-128 4-116 (292)
203 COG1748 LYS9 Saccharopine dehy 98.1 2.1E-05 4.5E-10 74.3 10.4 103 5-136 1-104 (389)
204 PRK06101 short chain dehydroge 98.1 2.9E-05 6.2E-10 68.8 10.9 149 6-173 2-160 (240)
205 PRK06196 oxidoreductase; Provi 98.1 3.1E-05 6.7E-10 71.7 11.5 162 5-180 26-205 (315)
206 PRK07453 protochlorophyllide o 98.1 1.4E-05 3E-10 74.2 9.2 120 4-132 5-145 (322)
207 PRK08213 gluconate 5-dehydroge 98.1 2E-05 4.4E-10 70.5 10.0 162 4-181 11-191 (259)
208 PRK09072 short chain dehydroge 98.1 2.4E-05 5.3E-10 70.2 10.5 124 1-133 1-140 (263)
209 PRK07985 oxidoreductase; Provi 98.1 3.1E-05 6.8E-10 71.0 11.4 158 6-181 50-224 (294)
210 PRK12921 2-dehydropantoate 2-r 98.1 2.5E-05 5.4E-10 71.9 10.7 108 6-140 1-111 (305)
211 PRK12742 oxidoreductase; Provi 98.1 4.8E-05 1E-09 66.9 12.1 161 1-181 1-171 (237)
212 PRK07531 bifunctional 3-hydrox 98.1 5.5E-05 1.2E-09 74.6 13.6 106 5-136 4-119 (495)
213 TIGR02437 FadB fatty oxidation 98.1 3E-05 6.6E-10 79.5 12.2 147 5-180 313-492 (714)
214 TIGR02440 FadJ fatty oxidation 98.1 3.4E-05 7.3E-10 79.1 12.4 146 6-180 305-484 (699)
215 PRK06249 2-dehydropantoate 2-r 98.1 4.1E-05 8.8E-10 71.0 11.9 124 1-154 1-125 (313)
216 PRK11730 fadB multifunctional 98.1 2.9E-05 6.3E-10 79.7 11.9 147 6-181 314-493 (715)
217 PRK08085 gluconate 5-dehydroge 98.1 5E-05 1.1E-09 67.8 12.0 158 3-180 7-182 (254)
218 PRK08220 2,3-dihydroxybenzoate 98.1 2.5E-05 5.5E-10 69.4 10.0 152 4-181 7-173 (252)
219 PRK07097 gluconate 5-dehydroge 98.1 6.2E-05 1.3E-09 67.7 12.6 151 3-173 8-178 (265)
220 PRK07063 short chain dehydroge 98.1 4.4E-05 9.5E-10 68.4 11.6 158 5-182 7-184 (260)
221 PRK08340 glucose-1-dehydrogena 98.1 4.4E-05 9.5E-10 68.4 11.5 156 6-182 1-177 (259)
222 PRK08945 putative oxoacyl-(acy 98.1 0.00018 3.9E-09 63.8 15.4 156 5-180 12-189 (247)
223 TIGR03376 glycerol3P_DH glycer 98.1 4.2E-05 9.2E-10 71.6 11.6 107 7-131 1-116 (342)
224 PRK08993 2-deoxy-D-gluconate 3 98.1 7.7E-05 1.7E-09 66.6 13.0 155 4-181 9-183 (253)
225 PRK09260 3-hydroxybutyryl-CoA 98.1 2.5E-05 5.4E-10 71.5 9.9 74 6-89 2-89 (288)
226 PRK06200 2,3-dihydroxy-2,3-dih 98.1 3.2E-05 6.9E-10 69.5 10.4 153 3-173 4-175 (263)
227 PF03807 F420_oxidored: NADP o 98.1 3E-05 6.6E-10 58.6 8.8 94 7-133 1-96 (96)
228 PRK12827 short chain dehydroge 98.1 6.1E-05 1.3E-09 66.6 11.9 153 4-172 5-178 (249)
229 PRK12825 fabG 3-ketoacyl-(acyl 98.0 3.4E-05 7.5E-10 68.0 10.2 118 5-132 6-143 (249)
230 PRK07023 short chain dehydroge 98.0 8.8E-06 1.9E-10 72.1 6.4 35 5-46 1-35 (243)
231 PRK07578 short chain dehydroge 98.0 3.5E-05 7.6E-10 66.2 10.0 144 6-182 1-150 (199)
232 PRK08339 short chain dehydroge 98.0 9.7E-05 2.1E-09 66.5 13.0 154 5-180 8-181 (263)
233 PRK07109 short chain dehydroge 98.0 0.00011 2.3E-09 68.8 13.7 159 5-183 8-186 (334)
234 TIGR03206 benzo_BadH 2-hydroxy 98.0 4.2E-05 9.1E-10 67.8 10.5 150 5-172 3-170 (250)
235 PRK07424 bifunctional sterol d 98.0 2.9E-05 6.3E-10 74.4 9.9 104 3-118 176-285 (406)
236 PRK00094 gpsA NAD(P)H-dependen 98.0 7.7E-05 1.7E-09 69.3 12.5 105 5-135 1-109 (325)
237 TIGR02441 fa_ox_alpha_mit fatt 98.0 3.9E-05 8.5E-10 78.9 11.4 146 6-180 336-514 (737)
238 PRK12747 short chain dehydroge 98.0 0.00014 3.1E-09 64.7 13.7 157 5-180 4-182 (252)
239 TIGR03649 ergot_EASG ergot alk 98.0 1.9E-05 4.2E-10 71.9 8.2 94 7-131 1-104 (285)
240 PF03446 NAD_binding_2: NAD bi 98.0 7.9E-05 1.7E-09 62.4 11.2 65 5-89 1-65 (163)
241 PRK06181 short chain dehydroge 98.0 7.9E-05 1.7E-09 66.8 12.0 120 6-134 2-139 (263)
242 TIGR02279 PaaC-3OHAcCoADH 3-hy 98.0 5.3E-05 1.1E-09 74.7 11.7 106 4-136 4-123 (503)
243 PRK06914 short chain dehydroge 98.0 5.8E-05 1.2E-09 68.4 11.1 146 6-171 4-170 (280)
244 PTZ00345 glycerol-3-phosphate 98.0 9E-05 1.9E-09 70.0 12.7 110 4-131 10-129 (365)
245 PRK08268 3-hydroxy-acyl-CoA de 98.0 6.2E-05 1.3E-09 74.3 11.9 104 4-134 6-123 (507)
246 PRK06841 short chain dehydroge 98.0 5.5E-05 1.2E-09 67.4 10.6 151 4-173 14-180 (255)
247 PRK06113 7-alpha-hydroxysteroi 98.0 8.3E-05 1.8E-09 66.4 11.7 158 4-181 10-184 (255)
248 PLN02545 3-hydroxybutyryl-CoA 98.0 7.6E-05 1.6E-09 68.6 11.5 104 5-135 4-121 (295)
249 PRK06114 short chain dehydroge 98.0 9.7E-05 2.1E-09 66.0 11.9 159 4-181 7-185 (254)
250 PRK08229 2-dehydropantoate 2-r 98.0 7.3E-05 1.6E-09 70.0 11.4 108 5-137 2-113 (341)
251 PRK06129 3-hydroxyacyl-CoA deh 98.0 8.6E-05 1.9E-09 68.7 11.7 75 5-89 2-90 (308)
252 PRK15057 UDP-glucose 6-dehydro 98.0 0.00021 4.6E-09 68.2 14.6 114 6-140 1-127 (388)
253 PRK07454 short chain dehydroge 98.0 5.1E-05 1.1E-09 67.1 9.8 122 1-133 1-143 (241)
254 PRK09134 short chain dehydroge 98.0 3.9E-05 8.5E-10 68.7 9.1 152 5-173 9-178 (258)
255 PRK08277 D-mannonate oxidoredu 98.0 0.00013 2.8E-09 66.1 12.6 154 5-180 10-198 (278)
256 PRK07775 short chain dehydroge 98.0 8.5E-05 1.8E-09 67.3 11.3 150 5-172 10-177 (274)
257 TIGR01830 3oxo_ACP_reduc 3-oxo 98.0 8E-05 1.7E-09 65.4 10.8 154 8-180 1-172 (239)
258 PRK11064 wecC UDP-N-acetyl-D-m 98.0 9.8E-05 2.1E-09 71.2 12.2 110 1-136 1-125 (415)
259 PRK08217 fabG 3-ketoacyl-(acyl 98.0 8.5E-05 1.8E-09 65.8 11.0 39 1-46 1-39 (253)
260 PRK09291 short chain dehydroge 98.0 0.00012 2.6E-09 65.2 12.0 147 6-172 3-163 (257)
261 PRK07035 short chain dehydroge 98.0 0.00011 2.4E-09 65.3 11.8 159 2-180 5-182 (252)
262 PRK06522 2-dehydropantoate 2-r 97.9 0.00015 3.3E-09 66.5 12.9 108 6-140 1-109 (304)
263 PLN02780 ketoreductase/ oxidor 97.9 0.00012 2.7E-09 68.0 12.3 157 5-181 53-233 (320)
264 PRK06139 short chain dehydroge 97.9 0.00016 3.5E-09 67.6 13.0 150 4-173 6-175 (330)
265 KOG2304 3-hydroxyacyl-CoA dehy 97.9 9.5E-06 2.1E-10 70.0 4.1 111 5-141 11-141 (298)
266 PRK07577 short chain dehydroge 97.9 4.4E-05 9.6E-10 67.0 8.6 108 5-132 3-127 (234)
267 TIGR01746 Thioester-redct thio 97.9 7.1E-05 1.5E-09 69.9 10.4 171 7-187 1-197 (367)
268 PRK09186 flagellin modificatio 97.9 0.00012 2.6E-09 65.2 11.3 162 5-180 4-192 (256)
269 PRK08589 short chain dehydroge 97.9 8.2E-05 1.8E-09 67.3 10.4 157 5-182 6-180 (272)
270 PRK05693 short chain dehydroge 97.9 8.1E-05 1.7E-09 67.3 10.3 115 6-133 2-131 (274)
271 PF05368 NmrA: NmrA-like famil 97.9 5E-05 1.1E-09 67.0 8.6 101 8-132 1-102 (233)
272 PRK06523 short chain dehydroge 97.9 4.6E-05 9.9E-10 68.2 8.4 153 5-182 9-178 (260)
273 PRK06123 short chain dehydroge 97.9 0.00015 3.2E-09 64.3 11.6 156 7-181 4-182 (248)
274 PRK08703 short chain dehydroge 97.9 0.00094 2E-08 58.9 16.7 152 5-174 6-180 (239)
275 PRK08177 short chain dehydroge 97.9 5E-05 1.1E-09 66.5 8.5 156 6-180 2-171 (225)
276 PLN02503 fatty acyl-CoA reduct 97.9 7.8E-05 1.7E-09 74.7 10.7 112 5-121 119-258 (605)
277 PRK06484 short chain dehydroge 97.9 9.1E-05 2E-09 73.3 11.2 158 5-182 269-440 (520)
278 PRK07832 short chain dehydroge 97.9 0.0005 1.1E-08 62.0 15.2 156 6-181 1-176 (272)
279 PLN00016 RNA-binding protein; 97.9 2.7E-05 6E-10 74.0 7.2 150 3-189 50-216 (378)
280 PF07993 NAD_binding_4: Male s 97.9 1.1E-05 2.3E-10 72.3 4.0 167 10-186 1-200 (249)
281 PRK08063 enoyl-(acyl carrier p 97.9 0.00032 7E-09 62.2 13.4 156 5-180 4-178 (250)
282 PRK12439 NAD(P)H-dependent gly 97.9 0.0002 4.4E-09 67.2 12.6 115 3-144 5-129 (341)
283 PRK15182 Vi polysaccharide bio 97.9 0.00033 7.1E-09 67.7 14.3 76 3-94 4-89 (425)
284 PRK06947 glucose-1-dehydrogena 97.9 0.00023 5.1E-09 63.0 12.5 157 5-180 2-181 (248)
285 PRK05854 short chain dehydroge 97.9 8.4E-05 1.8E-09 68.9 9.9 166 5-182 14-203 (313)
286 TIGR02415 23BDH acetoin reduct 97.9 0.0002 4.2E-09 63.7 11.9 154 7-181 2-175 (254)
287 PRK05650 short chain dehydroge 97.9 9.8E-05 2.1E-09 66.6 10.1 117 6-133 1-137 (270)
288 PRK05867 short chain dehydroge 97.9 9.9E-05 2.2E-09 65.8 9.9 158 4-181 8-186 (253)
289 PRK06198 short chain dehydroge 97.9 0.0003 6.6E-09 62.8 12.9 156 5-180 6-181 (260)
290 PRK12938 acetyacetyl-CoA reduc 97.9 0.00027 5.9E-09 62.5 12.4 151 6-173 4-172 (246)
291 PRK05855 short chain dehydroge 97.9 0.00016 3.5E-09 72.1 12.2 157 4-181 314-490 (582)
292 PRK14620 NAD(P)H-dependent gly 97.8 0.00021 4.7E-09 66.5 12.1 103 6-134 1-109 (326)
293 PRK09242 tropinone reductase; 97.8 0.00011 2.4E-09 65.6 9.8 158 4-181 8-185 (257)
294 PRK07074 short chain dehydroge 97.8 0.00023 4.9E-09 63.5 11.6 149 6-173 3-167 (257)
295 PRK09009 C factor cell-cell si 97.8 0.00025 5.4E-09 62.4 11.7 154 6-180 1-174 (235)
296 PRK08936 glucose-1-dehydrogena 97.8 0.00061 1.3E-08 61.0 14.3 158 5-182 7-184 (261)
297 PRK08415 enoyl-(acyl carrier p 97.8 0.00015 3.2E-09 65.9 10.3 162 1-181 1-182 (274)
298 PRK12367 short chain dehydroge 97.8 0.00017 3.8E-09 64.4 10.6 104 5-119 14-120 (245)
299 PRK06949 short chain dehydroge 97.8 0.00016 3.4E-09 64.5 10.3 157 5-181 9-191 (258)
300 PRK06057 short chain dehydroge 97.8 0.00018 3.9E-09 64.3 10.7 115 5-132 7-140 (255)
301 PF01118 Semialdhyde_dh: Semia 97.8 0.00016 3.5E-09 57.3 9.1 74 7-90 1-75 (121)
302 PRK07792 fabG 3-ketoacyl-(acyl 97.8 0.00018 4E-09 66.3 10.7 158 5-181 12-193 (306)
303 TIGR02632 RhaD_aldol-ADH rhamn 97.8 0.00023 4.9E-09 72.9 12.2 155 5-180 414-590 (676)
304 PRK07904 short chain dehydroge 97.8 0.00016 3.6E-09 64.7 10.0 157 4-181 7-184 (253)
305 PRK14619 NAD(P)H-dependent gly 97.8 0.00024 5.1E-09 65.8 11.3 80 4-132 3-83 (308)
306 PRK07889 enoyl-(acyl carrier p 97.8 0.00033 7.1E-09 62.9 11.9 158 5-181 7-183 (256)
307 PRK08251 short chain dehydroge 97.8 0.00018 3.8E-09 63.8 10.0 148 6-173 3-173 (248)
308 PRK08324 short chain dehydroge 97.8 0.00028 6.1E-09 72.3 12.4 154 6-180 423-595 (681)
309 PRK06484 short chain dehydroge 97.8 0.00017 3.6E-09 71.4 10.4 124 1-133 1-142 (520)
310 PRK12743 oxidoreductase; Provi 97.8 0.00069 1.5E-08 60.5 13.4 151 6-173 3-172 (256)
311 PRK08261 fabG 3-ketoacyl-(acyl 97.7 0.00025 5.3E-09 69.0 11.2 120 5-133 210-344 (450)
312 PRK12824 acetoacetyl-CoA reduc 97.7 0.00019 4.1E-09 63.3 9.5 118 6-133 3-140 (245)
313 PRK14982 acyl-ACP reductase; P 97.7 0.00023 4.9E-09 66.4 10.3 98 4-137 154-252 (340)
314 PRK08416 7-alpha-hydroxysteroi 97.7 0.00056 1.2E-08 61.3 12.6 156 5-181 8-190 (260)
315 KOG1205 Predicted dehydrogenas 97.7 0.0011 2.3E-08 60.2 14.2 157 4-180 11-189 (282)
316 PRK08862 short chain dehydroge 97.7 0.0016 3.4E-08 57.5 14.6 156 1-180 1-178 (227)
317 PRK08655 prephenate dehydrogen 97.7 0.00067 1.5E-08 65.8 13.2 66 6-89 1-66 (437)
318 PRK05872 short chain dehydroge 97.7 0.00016 3.4E-09 66.4 8.4 119 5-132 9-143 (296)
319 PRK07370 enoyl-(acyl carrier p 97.7 0.00043 9.3E-09 62.1 11.0 160 4-181 5-186 (258)
320 PRK12748 3-ketoacyl-(acyl-carr 97.7 0.00035 7.6E-09 62.4 10.4 156 1-173 1-186 (256)
321 TIGR01831 fabG_rel 3-oxoacyl-( 97.7 0.00032 6.8E-09 61.8 9.8 147 8-172 1-167 (239)
322 PF10727 Rossmann-like: Rossma 97.7 0.00026 5.5E-09 56.7 8.1 102 5-141 10-116 (127)
323 PRK06953 short chain dehydroge 97.6 0.00042 9.1E-09 60.5 10.1 115 6-133 2-131 (222)
324 KOG2711 Glycerol-3-phosphate d 97.6 0.00098 2.1E-08 61.1 12.4 108 4-131 20-139 (372)
325 PRK07062 short chain dehydroge 97.6 0.00091 2E-08 60.0 12.4 118 5-133 8-147 (265)
326 PRK07677 short chain dehydroge 97.6 0.00034 7.4E-09 62.3 9.4 156 6-180 2-176 (252)
327 PRK07533 enoyl-(acyl carrier p 97.6 0.00069 1.5E-08 60.8 11.4 159 4-181 9-187 (258)
328 PRK06483 dihydromonapterin red 97.6 0.00044 9.4E-09 60.9 9.6 147 6-173 3-167 (236)
329 PRK06940 short chain dehydroge 97.6 0.0004 8.6E-09 63.0 9.3 116 7-134 4-128 (275)
330 PRK06125 short chain dehydroge 97.6 0.002 4.4E-08 57.6 13.6 119 4-133 6-141 (259)
331 PRK14618 NAD(P)H-dependent gly 97.5 0.00045 9.8E-09 64.4 9.4 76 4-89 3-82 (328)
332 PRK08594 enoyl-(acyl carrier p 97.5 0.002 4.3E-08 57.8 12.9 159 5-181 7-186 (257)
333 COG1893 ApbA Ketopantoate redu 97.5 0.00084 1.8E-08 62.1 10.6 125 6-159 1-126 (307)
334 TIGR01829 AcAcCoA_reduct aceto 97.5 0.0012 2.6E-08 58.0 11.3 117 7-133 2-138 (242)
335 PRK07831 short chain dehydroge 97.5 0.0011 2.3E-08 59.5 11.1 156 5-181 17-195 (262)
336 TIGR02685 pter_reduc_Leis pter 97.5 0.0043 9.3E-08 55.8 15.0 158 6-182 2-199 (267)
337 PRK07679 pyrroline-5-carboxyla 97.5 0.0018 3.8E-08 59.1 12.6 71 5-89 3-73 (279)
338 PRK07680 late competence prote 97.5 0.0013 2.8E-08 59.8 11.6 100 6-135 1-100 (273)
339 PRK06505 enoyl-(acyl carrier p 97.5 0.0012 2.7E-08 59.7 11.4 155 6-181 8-184 (271)
340 PRK07201 short chain dehydroge 97.5 0.0011 2.3E-08 67.6 11.9 148 5-172 371-540 (657)
341 PRK07417 arogenate dehydrogena 97.5 0.0012 2.7E-08 60.1 11.1 65 6-89 1-65 (279)
342 PRK06079 enoyl-(acyl carrier p 97.5 0.001 2.3E-08 59.4 10.4 160 1-181 1-182 (252)
343 PRK08017 oxidoreductase; Provi 97.5 0.00085 1.8E-08 59.7 9.8 151 6-182 3-172 (256)
344 PRK11880 pyrroline-5-carboxyla 97.5 0.0013 2.8E-08 59.4 11.1 69 5-89 2-70 (267)
345 PRK07791 short chain dehydroge 97.5 0.0017 3.6E-08 59.3 11.8 159 5-181 6-195 (286)
346 PRK06928 pyrroline-5-carboxyla 97.5 0.0021 4.5E-08 58.6 12.3 101 5-134 1-101 (277)
347 PRK07502 cyclohexadienyl dehyd 97.4 0.0021 4.5E-08 59.4 12.3 74 1-90 1-75 (307)
348 PRK07041 short chain dehydroge 97.4 0.00046 1E-08 60.4 7.4 112 9-131 1-123 (230)
349 PF02558 ApbA: Ketopantoate re 97.4 0.00056 1.2E-08 56.1 7.4 120 8-158 1-125 (151)
350 PRK07984 enoyl-(acyl carrier p 97.4 0.0012 2.5E-08 59.6 10.0 155 6-181 7-184 (262)
351 PLN02688 pyrroline-5-carboxyla 97.4 0.0024 5.1E-08 57.7 11.9 68 6-89 1-69 (266)
352 PRK06603 enoyl-(acyl carrier p 97.4 0.0035 7.6E-08 56.3 12.9 155 6-181 9-185 (260)
353 PRK09730 putative NAD(P)-bindi 97.4 0.00096 2.1E-08 58.9 9.0 118 6-132 2-142 (247)
354 TIGR03443 alpha_am_amid L-amin 97.4 0.00078 1.7E-08 74.5 9.8 176 4-187 970-1182(1389)
355 TIGR01289 LPOR light-dependent 97.3 0.001 2.2E-08 61.6 9.0 119 6-133 4-144 (314)
356 PRK08159 enoyl-(acyl carrier p 97.3 0.0028 6E-08 57.4 11.4 157 6-181 11-187 (272)
357 TIGR01500 sepiapter_red sepiap 97.3 0.0016 3.5E-08 58.2 9.7 156 7-182 2-190 (256)
358 PRK05599 hypothetical protein; 97.3 0.011 2.4E-07 52.5 15.1 154 6-181 1-175 (246)
359 PF01113 DapB_N: Dihydrodipico 97.3 0.0029 6.3E-08 50.4 9.8 73 6-89 1-75 (124)
360 PRK07634 pyrroline-5-carboxyla 97.3 0.005 1.1E-07 54.7 12.4 72 4-89 3-74 (245)
361 PRK06728 aspartate-semialdehyd 97.2 0.0015 3.2E-08 61.2 8.9 77 1-90 1-77 (347)
362 PRK06997 enoyl-(acyl carrier p 97.2 0.0061 1.3E-07 54.7 12.7 157 6-181 7-184 (260)
363 PF00106 adh_short: short chai 97.2 0.0032 6.9E-08 52.1 10.1 121 7-135 2-138 (167)
364 PRK05708 2-dehydropantoate 2-r 97.2 0.0058 1.3E-07 56.5 12.7 120 5-156 2-125 (305)
365 PRK12491 pyrroline-5-carboxyla 97.2 0.005 1.1E-07 56.0 12.1 69 6-89 3-71 (272)
366 COG3320 Putative dehydrogenase 97.2 0.0036 7.7E-08 58.5 11.1 170 6-186 1-199 (382)
367 PRK12859 3-ketoacyl-(acyl-carr 97.2 0.0059 1.3E-07 54.6 12.5 156 5-180 6-192 (256)
368 PRK08303 short chain dehydroge 97.2 0.0069 1.5E-07 55.9 13.2 161 5-182 8-201 (305)
369 PF01488 Shikimate_DH: Shikima 97.2 0.0015 3.2E-08 52.9 7.7 77 4-93 11-87 (135)
370 smart00822 PKS_KR This enzymat 97.2 0.0018 3.9E-08 53.4 8.5 118 7-132 2-136 (180)
371 TIGR00872 gnd_rel 6-phosphoglu 97.2 0.0026 5.6E-08 58.6 10.2 67 6-89 1-67 (298)
372 cd01078 NAD_bind_H4MPT_DH NADP 97.2 0.001 2.2E-08 57.2 6.8 78 4-90 27-106 (194)
373 PTZ00142 6-phosphogluconate de 97.2 0.0053 1.2E-07 60.0 12.5 101 5-134 1-104 (470)
374 PRK11559 garR tartronate semia 97.2 0.0057 1.2E-07 56.1 12.1 65 5-89 2-66 (296)
375 PRK05671 aspartate-semialdehyd 97.2 0.0027 5.7E-08 59.5 9.9 75 1-90 1-75 (336)
376 PRK08690 enoyl-(acyl carrier p 97.2 0.012 2.6E-07 52.8 14.0 161 1-182 1-186 (261)
377 KOG1431 GDP-L-fucose synthetas 97.2 0.0026 5.7E-08 55.3 8.9 237 5-278 1-274 (315)
378 TIGR01505 tartro_sem_red 2-hyd 97.2 0.0025 5.5E-08 58.4 9.5 63 7-89 1-63 (291)
379 PRK06720 hypothetical protein; 97.2 0.0055 1.2E-07 51.6 10.7 81 4-93 15-105 (169)
380 COG0287 TyrA Prephenate dehydr 97.1 0.0088 1.9E-07 54.5 12.6 69 4-89 2-72 (279)
381 PRK11199 tyrA bifunctional cho 97.1 0.003 6.6E-08 60.1 9.9 53 5-89 98-150 (374)
382 PRK12549 shikimate 5-dehydroge 97.1 0.0032 6.9E-08 57.6 9.6 74 5-89 127-200 (284)
383 PLN02256 arogenate dehydrogena 97.1 0.0048 1E-07 57.0 10.7 66 3-89 34-100 (304)
384 COG2084 MmsB 3-hydroxyisobutyr 97.1 0.0024 5.3E-08 58.1 8.5 66 6-90 1-66 (286)
385 COG1712 Predicted dinucleotide 97.1 0.0049 1.1E-07 53.6 9.7 93 6-131 1-93 (255)
386 KOG1200 Mitochondrial/plastidi 97.1 0.0056 1.2E-07 52.2 9.8 141 6-158 15-176 (256)
387 PRK12480 D-lactate dehydrogena 97.1 0.0053 1.2E-07 57.4 10.9 61 5-89 146-206 (330)
388 PRK14874 aspartate-semialdehyd 97.1 0.0034 7.3E-08 58.8 9.5 72 5-90 1-72 (334)
389 COG0702 Predicted nucleoside-d 97.0 0.00091 2E-08 60.0 5.1 74 6-92 1-74 (275)
390 PRK12490 6-phosphogluconate de 97.0 0.011 2.4E-07 54.5 12.3 64 6-89 1-67 (299)
391 PRK06545 prephenate dehydrogen 97.0 0.0051 1.1E-07 58.2 10.2 68 6-89 1-68 (359)
392 COG0289 DapB Dihydrodipicolina 97.0 0.0087 1.9E-07 53.4 10.9 74 4-87 1-75 (266)
393 PLN02383 aspartate semialdehyd 97.0 0.0062 1.3E-07 57.2 10.6 74 3-90 5-78 (344)
394 COG0677 WecC UDP-N-acetyl-D-ma 97.0 0.013 2.8E-07 55.1 12.4 77 4-95 8-98 (436)
395 KOG4039 Serine/threonine kinas 97.0 0.0022 4.8E-08 53.7 6.5 101 3-121 16-122 (238)
396 KOG1201 Hydroxysteroid 17-beta 97.0 0.021 4.6E-07 51.8 13.2 160 5-184 38-217 (300)
397 COG0569 TrkA K+ transport syst 97.0 0.0011 2.3E-08 58.6 4.8 74 6-90 1-75 (225)
398 KOG2666 UDP-glucose/GDP-mannos 97.0 0.0016 3.5E-08 59.2 5.9 82 5-94 1-91 (481)
399 COG3967 DltE Short-chain dehyd 96.9 0.016 3.5E-07 49.9 11.4 121 1-133 1-140 (245)
400 cd01065 NAD_bind_Shikimate_DH 96.9 0.0047 1E-07 50.7 8.2 75 4-92 18-92 (155)
401 PRK15461 NADH-dependent gamma- 96.9 0.003 6.5E-08 58.1 7.7 64 6-89 2-65 (296)
402 PRK08507 prephenate dehydrogen 96.9 0.0094 2E-07 54.2 10.7 66 6-89 1-66 (275)
403 PLN02712 arogenate dehydrogena 96.9 0.015 3.3E-07 59.4 13.2 65 4-89 51-116 (667)
404 PRK06598 aspartate-semialdehyd 96.9 0.0059 1.3E-07 57.6 9.3 74 5-90 1-74 (369)
405 cd05213 NAD_bind_Glutamyl_tRNA 96.9 0.0098 2.1E-07 55.1 10.6 103 4-137 177-279 (311)
406 PRK09599 6-phosphogluconate de 96.9 0.019 4E-07 53.0 12.4 64 6-89 1-67 (301)
407 PLN02968 Probable N-acetyl-gam 96.9 0.0032 7E-08 59.9 7.4 36 4-45 37-72 (381)
408 PRK08664 aspartate-semialdehyd 96.8 0.011 2.4E-07 55.7 10.5 34 5-44 3-36 (349)
409 PTZ00431 pyrroline carboxylate 96.8 0.017 3.7E-07 52.1 11.2 63 5-89 3-65 (260)
410 PLN00015 protochlorophyllide r 96.7 0.0078 1.7E-07 55.5 8.7 116 9-133 1-138 (308)
411 PRK08040 putative semialdehyde 96.7 0.014 3E-07 54.6 10.1 75 1-90 1-75 (336)
412 PRK08269 3-hydroxybutyryl-CoA 96.7 0.023 5.1E-07 52.7 11.5 103 17-142 1-124 (314)
413 PRK05479 ketol-acid reductoiso 96.6 0.014 3.1E-07 54.3 9.8 66 4-89 16-81 (330)
414 cd05312 NAD_bind_1_malic_enz N 96.6 0.0023 4.9E-08 57.9 4.3 109 6-135 26-144 (279)
415 KOG1208 Dehydrogenases with di 96.6 0.047 1E-06 50.6 13.0 162 5-180 35-220 (314)
416 PF03435 Saccharop_dh: Sacchar 96.6 0.0012 2.7E-08 62.9 2.5 76 8-91 1-77 (386)
417 PRK06476 pyrroline-5-carboxyla 96.6 0.026 5.6E-07 50.7 10.9 69 6-89 1-69 (258)
418 COG0345 ProC Pyrroline-5-carbo 96.6 0.018 3.9E-07 51.9 9.6 95 5-131 1-95 (266)
419 TIGR01850 argC N-acetyl-gamma- 96.5 0.017 3.7E-07 54.3 9.7 34 6-45 1-35 (346)
420 PRK14106 murD UDP-N-acetylmura 96.5 0.019 4.1E-07 55.9 10.3 117 1-134 1-117 (450)
421 TIGR01745 asd_gamma aspartate- 96.5 0.016 3.5E-07 54.5 9.3 72 6-90 1-73 (366)
422 PF03949 Malic_M: Malic enzyme 96.5 0.016 3.5E-07 51.8 8.7 110 6-135 26-145 (255)
423 PLN02350 phosphogluconate dehy 96.5 0.023 5E-07 55.9 10.6 73 4-89 5-80 (493)
424 PRK09620 hypothetical protein; 96.5 0.0057 1.2E-07 54.1 5.8 34 5-45 3-52 (229)
425 PRK13304 L-aspartate dehydroge 96.5 0.036 7.9E-07 50.1 11.1 69 5-90 1-70 (265)
426 PRK13302 putative L-aspartate 96.5 0.011 2.3E-07 53.8 7.6 69 4-90 5-76 (271)
427 cd00762 NAD_bind_malic_enz NAD 96.4 0.0036 7.8E-08 55.8 4.3 110 6-135 26-145 (254)
428 PRK00436 argC N-acetyl-gamma-g 96.4 0.021 4.6E-07 53.7 9.8 25 5-29 2-26 (343)
429 COG0136 Asd Aspartate-semialde 96.4 0.019 4.1E-07 53.1 8.9 74 5-90 1-75 (334)
430 KOG4169 15-hydroxyprostaglandi 96.4 0.0096 2.1E-07 52.0 6.5 160 1-183 1-179 (261)
431 PRK07574 formate dehydrogenase 96.4 0.026 5.6E-07 53.8 9.8 66 5-90 192-257 (385)
432 PRK13243 glyoxylate reductase; 96.3 0.02 4.3E-07 53.7 8.9 64 5-90 150-213 (333)
433 PRK15469 ghrA bifunctional gly 96.3 0.02 4.3E-07 53.1 8.8 91 5-131 136-226 (312)
434 TIGR00873 gnd 6-phosphoglucona 96.3 0.017 3.6E-07 56.6 8.6 68 7-89 1-71 (467)
435 TIGR01035 hemA glutamyl-tRNA r 96.3 0.016 3.5E-07 55.9 8.3 104 5-137 180-283 (417)
436 TIGR01296 asd_B aspartate-semi 96.3 0.023 5E-07 53.3 9.1 70 7-90 1-70 (339)
437 PRK15059 tartronate semialdehy 96.3 0.014 3E-07 53.6 7.3 63 6-89 1-63 (292)
438 COG0002 ArgC Acetylglutamate s 96.3 0.011 2.3E-07 54.9 6.4 36 4-45 1-36 (349)
439 TIGR02371 ala_DH_arch alanine 96.3 0.027 5.9E-07 52.5 9.4 74 4-89 127-200 (325)
440 TIGR02354 thiF_fam2 thiamine b 96.2 0.065 1.4E-06 46.4 10.9 34 5-45 21-54 (200)
441 PF02826 2-Hacid_dh_C: D-isome 96.2 0.012 2.7E-07 49.8 6.2 66 5-91 36-101 (178)
442 PLN02712 arogenate dehydrogena 96.2 0.055 1.2E-06 55.3 11.9 65 4-89 368-433 (667)
443 PLN02730 enoyl-[acyl-carrier-p 96.2 0.21 4.5E-06 46.1 14.8 161 2-182 6-220 (303)
444 TIGR00978 asd_EA aspartate-sem 96.2 0.044 9.6E-07 51.5 10.3 25 6-30 1-25 (341)
445 PF08659 KR: KR domain; Inter 96.2 0.033 7.2E-07 47.2 8.7 119 7-133 2-137 (181)
446 PRK08605 D-lactate dehydrogena 96.2 0.019 4.1E-07 53.7 7.7 63 5-90 146-209 (332)
447 TIGR01692 HIBADH 3-hydroxyisob 96.1 0.033 7.1E-07 51.0 9.0 61 10-90 1-61 (288)
448 cd05311 NAD_bind_2_malic_enz N 96.1 0.085 1.8E-06 46.6 11.3 78 4-90 24-106 (226)
449 PRK11863 N-acetyl-gamma-glutam 96.1 0.044 9.6E-07 50.7 9.8 26 5-30 2-27 (313)
450 PRK00048 dihydrodipicolinate r 96.1 0.02 4.3E-07 51.6 7.4 67 5-89 1-68 (257)
451 COG1028 FabG Dehydrogenases wi 96.1 0.082 1.8E-06 46.7 11.3 125 1-133 1-144 (251)
452 PRK06141 ornithine cyclodeamin 96.1 0.042 9.2E-07 51.0 9.6 74 4-90 124-198 (314)
453 cd01487 E1_ThiF_like E1_ThiF_l 96.1 0.027 5.7E-07 47.7 7.5 32 7-45 1-32 (174)
454 PRK08291 ectoine utilization p 96.1 0.044 9.6E-07 51.2 9.7 74 5-90 132-206 (330)
455 PRK00258 aroE shikimate 5-dehy 96.0 0.044 9.5E-07 49.9 9.4 76 4-93 122-197 (278)
456 PRK06732 phosphopantothenate-- 96.0 0.004 8.7E-08 55.1 2.3 64 13-93 24-93 (229)
457 PF02423 OCD_Mu_crystall: Orni 96.0 0.038 8.2E-07 51.3 8.8 73 4-89 127-200 (313)
458 PRK08818 prephenate dehydrogen 96.0 0.076 1.7E-06 50.4 10.9 55 5-89 4-59 (370)
459 KOG1014 17 beta-hydroxysteroid 96.0 0.043 9.4E-07 50.1 8.8 118 8-136 52-191 (312)
460 TIGR01724 hmd_rel H2-forming N 96.0 0.09 2E-06 48.5 10.8 58 17-89 31-89 (341)
461 KOG4777 Aspartate-semialdehyde 95.9 0.011 2.3E-07 52.3 4.6 75 7-90 5-86 (361)
462 PRK07340 ornithine cyclodeamin 95.9 0.049 1.1E-06 50.3 9.2 73 4-90 124-197 (304)
463 KOG2865 NADH:ubiquinone oxidor 95.9 0.0091 2E-07 53.8 4.1 112 7-131 63-176 (391)
464 PF02882 THF_DHG_CYH_C: Tetrah 95.9 0.042 9.1E-07 45.8 7.7 57 4-93 35-91 (160)
465 PRK06901 aspartate-semialdehyd 95.9 0.022 4.8E-07 52.5 6.5 71 5-90 3-73 (322)
466 PRK08300 acetaldehyde dehydrog 95.8 0.59 1.3E-05 43.0 15.7 36 4-46 3-39 (302)
467 cd01075 NAD_bind_Leu_Phe_Val_D 95.8 0.031 6.8E-07 48.3 7.1 34 5-46 28-61 (200)
468 PRK00045 hemA glutamyl-tRNA re 95.8 0.053 1.2E-06 52.5 9.4 73 4-92 181-253 (423)
469 PRK06407 ornithine cyclodeamin 95.8 0.059 1.3E-06 49.7 9.3 76 4-90 116-191 (301)
470 PRK15438 erythronate-4-phospha 95.8 0.033 7.1E-07 52.9 7.6 62 5-91 116-177 (378)
471 PRK08618 ornithine cyclodeamin 95.8 0.06 1.3E-06 50.2 9.4 74 5-90 127-201 (325)
472 TIGR02356 adenyl_thiF thiazole 95.8 0.031 6.8E-07 48.4 7.0 35 4-45 20-54 (202)
473 PRK12475 thiamine/molybdopteri 95.8 0.039 8.5E-07 51.7 8.1 34 5-45 24-57 (338)
474 PRK07688 thiamine/molybdopteri 95.8 0.039 8.5E-07 51.7 8.0 34 5-45 24-57 (339)
475 PRK14194 bifunctional 5,10-met 95.8 0.036 7.7E-07 50.9 7.4 56 4-92 158-213 (301)
476 PLN02858 fructose-bisphosphate 95.8 0.076 1.6E-06 58.6 11.2 70 1-90 319-389 (1378)
477 PLN03139 formate dehydrogenase 95.8 0.06 1.3E-06 51.3 9.2 65 5-89 199-263 (386)
478 PRK08306 dipicolinate synthase 95.7 0.07 1.5E-06 49.1 9.4 68 4-89 151-218 (296)
479 PRK06823 ornithine cyclodeamin 95.7 0.084 1.8E-06 49.0 10.0 75 4-90 127-201 (315)
480 KOG0409 Predicted dehydrogenas 95.7 0.036 7.7E-07 50.4 7.1 68 5-92 35-102 (327)
481 TIGR02992 ectoine_eutC ectoine 95.7 0.076 1.7E-06 49.5 9.7 74 5-90 129-203 (326)
482 PRK07589 ornithine cyclodeamin 95.7 0.065 1.4E-06 50.4 9.1 73 4-89 128-201 (346)
483 PRK06444 prephenate dehydrogen 95.7 0.025 5.5E-07 48.8 5.9 25 6-30 1-25 (197)
484 cd01079 NAD_bind_m-THF_DH NAD 95.6 0.033 7.1E-07 47.7 6.3 77 5-93 62-138 (197)
485 PLN02928 oxidoreductase family 95.6 0.048 1E-06 51.4 8.0 104 5-132 159-263 (347)
486 TIGR00507 aroE shikimate 5-deh 95.6 0.078 1.7E-06 48.0 9.2 73 5-92 117-189 (270)
487 COG1089 Gmd GDP-D-mannose dehy 95.6 0.009 1.9E-07 53.8 2.9 121 6-133 3-132 (345)
488 PRK00257 erythronate-4-phospha 95.6 0.04 8.6E-07 52.5 7.5 62 5-91 116-177 (381)
489 PRK13301 putative L-aspartate 95.6 0.1 2.3E-06 46.9 9.7 87 5-126 2-90 (267)
490 PTZ00075 Adenosylhomocysteinas 95.6 0.054 1.2E-06 52.7 8.4 90 5-133 254-343 (476)
491 TIGR01327 PGDH D-3-phosphoglyc 95.6 0.045 9.9E-07 54.4 8.2 65 5-90 138-202 (525)
492 PRK14192 bifunctional 5,10-met 95.6 0.044 9.5E-07 50.1 7.4 56 4-92 158-213 (283)
493 TIGR00465 ilvC ketol-acid redu 95.6 0.033 7.1E-07 51.7 6.7 65 5-89 3-67 (314)
494 PRK14806 bifunctional cyclohex 95.6 0.18 3.9E-06 52.3 12.9 69 6-90 4-72 (735)
495 PRK13940 glutamyl-tRNA reducta 95.6 0.042 9.2E-07 52.9 7.7 75 4-93 180-254 (414)
496 PRK12557 H(2)-dependent methyl 95.6 0.19 4.1E-06 47.2 11.9 58 17-89 31-89 (342)
497 cd01080 NAD_bind_m-THF_DH_Cycl 95.6 0.041 9E-07 46.2 6.7 55 4-92 43-98 (168)
498 cd00401 AdoHcyase S-adenosyl-L 95.6 0.1 2.2E-06 50.2 10.1 65 5-90 202-266 (413)
499 KOG2305 3-hydroxyacyl-CoA dehy 95.5 0.033 7.2E-07 48.6 5.9 112 5-140 3-127 (313)
500 PLN00203 glutamyl-tRNA reducta 95.5 0.082 1.8E-06 52.4 9.4 75 5-92 266-340 (519)
No 1
>PRK05442 malate dehydrogenase; Provisional
Probab=100.00 E-value=3.7e-72 Score=516.92 Aligned_cols=313 Identities=59% Similarity=0.927 Sum_probs=282.8
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcC
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT 80 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~ 80 (320)
|+ +|+||+|+||+|+||+++++.|+.+++++.+...+++|+|++++.+++.|+++||+|+..+...++.++.+.+++++
T Consensus 1 ~~-~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~y~~~~ 79 (326)
T PRK05442 1 MK-APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVITDDPNVAFK 79 (326)
T ss_pred CC-CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEecChHHHhC
Confidence 55 67899999977999999999999998875344458999999776677999999999998665556677778899999
Q ss_pred CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCCcEEEeehhh
Q 020875 81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLD 160 (320)
Q Consensus 81 ~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~i~~~t~ld 160 (320)
|||+||++||.+++++++|.+++..|+++++++++.|+++++|++++|++|||+|++|++++++++++|++|++|.|.||
T Consensus 80 daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~k~s~g~p~~rViG~t~LD 159 (326)
T PRK05442 80 DADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPANTNALIAMKNAPDLPAENFTAMTRLD 159 (326)
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCchHHHHHHHHHHcCCCCHHHEEeeeHHH
Confidence 99999999999999999999999999999999999999987679999999999999999999974499999987779999
Q ss_pred HHHHHHHHHHHcCCCCCCeeeeEEEcCCCCccccccccccccCCCCCcchhhhcccchhhhhHHHHHHhhhhHHHHhcCC
Q 020875 161 HNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARK 240 (320)
Q Consensus 161 ~~r~~~~~a~~l~v~~~~v~~~~v~G~hg~~~~~~~S~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg 240 (320)
++||++.+|++|+++|++|++++||||||++|||+||++++ +|+|+.+++.+++|..++|.+++++++++|++.||
T Consensus 160 s~R~r~~la~~l~v~~~~V~~~vV~GeHG~s~~~~~S~~~v----~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~kG 235 (326)
T PRK05442 160 HNRALSQLAAKAGVPVADIKKMTVWGNHSATQYPDFRHATI----DGKPAAEVINDQAWLEDTFIPTVQKRGAAIIEARG 235 (326)
T ss_pred HHHHHHHHHHHhCcChHHeEEeEEEECCcCceeeccccCEE----CCEEHHHHccchhhHHHHHHHHHHhhHHHHHhCcC
Confidence 99999999999999999999987799999999999999999 99999999877677788999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHhCCCCCcEEEEEEecCCccCCCCceEEEEEEEEeCCeEEEecCCCCChhhhhcccCccc
Q 020875 241 LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGTDAILYPMSFLSPIAF 318 (320)
Q Consensus 241 ~~~~~~~a~a~~~~i~~~i~~~~~~~i~~~~v~~~g~yg~~~~v~~s~P~~i~~G~~~~~~~~~L~~~E~~~l~~~~~ 318 (320)
+|+|+++++++++++++++.++++++++|+|++++|+||+|+|+|||+||++|+|+|+++.+++|+++||++|++++.
T Consensus 236 ~t~~~~a~~~~~~iv~ail~~~~~~~i~~~sv~~~g~ygi~~~v~~s~P~~ig~Gv~~iv~~l~L~~~E~~~l~~s~~ 313 (326)
T PRK05442 236 ASSAASAANAAIDHVRDWVLGTPEGDWVSMGVPSDGSYGIPEGLIFGFPVTCENGEYEIVQGLEIDDFSREKIDATLA 313 (326)
T ss_pred CccHHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCccCCcCCeEEEEEEEEcCcEEEEeCCCCCCHHHHHHHHHHHH
Confidence 999877555467888877764227899999999999999999999999999999999998679999999999998874
No 2
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=100.00 E-value=7.6e-72 Score=514.27 Aligned_cols=312 Identities=63% Similarity=0.988 Sum_probs=282.2
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCC
Q 020875 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (320)
Q Consensus 3 ~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~a 82 (320)
++|.||+||||+|+||+++++.|+.+++++.+...|++|+|++++.+++.|+++||+|...+..+++.++.+.+++++||
T Consensus 1 ~~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~da 80 (323)
T TIGR01759 1 KKPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVATTDPEEAFKDV 80 (323)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEecChHHHhCCC
Confidence 47899999997799999999999999987644555999999976557789999999999866555667777889999999
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCCcEEEeehhhHH
Q 020875 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHN 162 (320)
Q Consensus 83 DvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~i~~~t~ld~~ 162 (320)
|+||++||.+++++++|.+++..|+++++++++.|+++++|++++|++|||+|++|++++++++++|++|++|+|.||++
T Consensus 81 DvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~k~s~g~p~~rViG~t~LDs~ 160 (323)
T TIGR01759 81 DAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNPANTNALIASKNAPDIPPKNFSAMTRLDHN 160 (323)
T ss_pred CEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHHHHHcCCCCHHHEEEeeHHHHH
Confidence 99999999999999999999999999999999999999944999999999999999999997339999998777999999
Q ss_pred HHHHHHHHHcCCCCCCeeeeEEEcCCCCccccccccccccCCCCCcchhhhcccchhhhhHHHHHHhhhhHHHHhcCCcc
Q 020875 163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLS 242 (320)
Q Consensus 163 r~~~~~a~~l~v~~~~v~~~~v~G~hg~~~~~~~S~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~~ 242 (320)
||++++|++++++|++|+.++||||||++|+|+||++++ +|+|+.+++.++.|++++|.+++++++++|++.||+|
T Consensus 161 R~r~~la~~l~v~~~~V~~~~V~GeHG~s~v~~~S~~~v----~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~kG~t 236 (323)
T TIGR01759 161 RAKYQLAAKAGVPVSDVKNVIIWGNHSNTQVPDFTHATV----DGRPVKEVIKDDKWLEGEFIPTVQQRGAAVIEARGAS 236 (323)
T ss_pred HHHHHHHHHhCcChHHeEEeEEEecCCCceeeccccCEE----CCccHHHHhcchhhHHHHHHHHHHhhHHHHHhccCCc
Confidence 999999999999999998776799999999999999999 9999999987766777899999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHhCCCCCcEEEEEEecCC-ccCCCCceEEEEEEEEe-CCeEEEecCCCCChhhhhcccCccc
Q 020875 243 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTCR-NGEWTIVQGTDAILYPMSFLSPIAF 318 (320)
Q Consensus 243 ~~~~~a~a~~~~i~~~i~~~~~~~i~~~~v~~~g-~yg~~~~v~~s~P~~i~-~G~~~~~~~~~L~~~E~~~l~~~~~ 318 (320)
+|+++|+++++++.+++.+.+.++++|+|+|++| +||+|+|+|||+||++| +|+|+++++++|+++|+++|+.+|.
T Consensus 237 ~~~~~a~a~~~iv~ail~~~~~~~v~~~s~~~~g~~Yg~~~~v~~s~P~~lg~~Gv~~iv~~l~L~~~E~~~l~~sa~ 314 (323)
T TIGR01759 237 SAASAANAAIDHVRDWVTGTPEGDWVSMGVYSDGNPYGIPEGIIFSFPVTCKGDGEWEIVEGLPLDDFVRGKLDATED 314 (323)
T ss_pred chHHHHHHHHHHHHHHHcCCCCCcEEEEEEEeCCcccCCCCCeEEEEEEEEcCCeeEEEcCCCCCCHHHHHHHHHHHH
Confidence 9877889999888876664223899999999999 99998899999999999 9999999559999999999998874
No 3
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=100.00 E-value=1.5e-70 Score=512.77 Aligned_cols=311 Identities=42% Similarity=0.661 Sum_probs=283.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCC
Q 020875 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (320)
Q Consensus 3 ~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~a 82 (320)
++|.||+||||+|+||+++++.|+.+++++.+++..++|+|.+.++++++|+++||.|+..++..++.++++.+++++||
T Consensus 42 ~~p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~~y~~~kda 121 (387)
T TIGR01757 42 KKTVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGIDPYEVFEDA 121 (387)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecCCHHHhCCC
Confidence 35789999997799999999999999998766666788885555568899999999999866655677777889999999
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCCc-EEEeehhhH
Q 020875 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDH 161 (320)
Q Consensus 83 DvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~-i~~~t~ld~ 161 (320)
|+||++||.|++++++|.|++..|+++++++++.|+++++|++++|++|||+|++|+++++. +++|++| |+++|.||+
T Consensus 122 DIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsNPvDv~t~v~~k~-sg~~~~rviG~gT~LDs 200 (387)
T TIGR01757 122 DWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGNPCNTNALIAMKN-APNIPRKNFHALTRLDE 200 (387)
T ss_pred CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCcHHHHHHHHHHH-cCCCcccEEEecchhHH
Confidence 99999999999999999999999999999999999998768999999999999999999996 6777777 689999999
Q ss_pred HHHHHHHHHHcCCCCCCeeeeEEEcCCCCccccccccccccCCCCCcchhhhcccchhhhhHHHHHHhhhhHHHHhcCCc
Q 020875 162 NRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKL 241 (320)
Q Consensus 162 ~r~~~~~a~~l~v~~~~v~~~~v~G~hg~~~~~~~S~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~ 241 (320)
+|+++++|+++++++++|+..+||||||++|||+||+++| +|+|+.+++.++.|.+++|.++++++|++|++.||+
T Consensus 201 aR~r~~LA~~l~v~~~~V~~~~V~GeHGds~vp~~S~a~V----~G~pl~~~~~~~~~~~~ei~~~v~~~g~eIi~~KG~ 276 (387)
T TIGR01757 201 NRAKCQLALKSGKFYTSVSNVTIWGNHSTTQVPDFVNAKI----GGRPAKEVIKDTKWLEEEFTPTVQKRGGALIKKWGR 276 (387)
T ss_pred HHHHHHHHHHHCcChhHcceeEEEecCCCcEEecceeeEE----CCEEhHHhcccccchHHHHHHHHHHHHHHHHhccCc
Confidence 9999999999999999996444699999999999999999 999999998776787899999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHhCCCCCcEEEEEEecCCc-cCCCCceEEEEEEEEe-CCeEEEecCCCCChhhhhcccCccc
Q 020875 242 SSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPVTCR-NGEWTIVQGTDAILYPMSFLSPIAF 318 (320)
Q Consensus 242 ~~~~~~a~a~~~~i~~~i~~~~~~~i~~~~v~~~g~-yg~~~~v~~s~P~~i~-~G~~~~~~~~~L~~~E~~~l~~~~~ 318 (320)
|+|+++|.++++++++|+.+.|+++++|+|++++|+ ||+|+|+|||+||++| +|+|+++.+++|+++||++|+.+|.
T Consensus 277 t~~~s~a~ai~~~i~ai~~g~d~~~il~vsv~~~Ge~YGi~~gv~~S~Pvvig~~Gv~~Iv~~l~L~~~E~~~l~~Sa~ 355 (387)
T TIGR01757 277 SSAASTAVSIADAIKSLVVPTPEGDWFSTGVYTDGNPYGIAEGLVFSMPCRSKGDGDYELATDVSMDDFLRERIRKSED 355 (387)
T ss_pred hhHHHHHHHHHHHHHHHhcCCCCCeEEEEEEEeCCcccCCCCCEEEEEEEEEeCCEEEEECCCCCCCHHHHHHHHHHHH
Confidence 988788999999999988776889999999999997 9988999999999999 9999997689999999999998874
No 4
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=100.00 E-value=9.5e-70 Score=491.01 Aligned_cols=294 Identities=32% Similarity=0.420 Sum_probs=269.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeC-ChhhhcCCCcE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT-DAVEACTGVNI 84 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~-~~~~al~~aDv 84 (320)
+||+|||| |+||+++++.|+.+++. .|++|+|+++ ++++|.++||.|...+...+..+.. +.+++++|||+
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~-----~el~LiDi~~--~~~~G~a~DL~~~~~~~~~~~~i~~~~~y~~~~~aDi 72 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLG-----SELVLIDINE--EKAEGVALDLSHAAAPLGSDVKITGDGDYEDLKGADI 72 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhccccc-----ceEEEEEccc--ccccchhcchhhcchhccCceEEecCCChhhhcCCCE
Confidence 59999996 99999999999877764 3999999984 7889999999999877665566554 45899999999
Q ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCCc-EEEeehhhHHH
Q 020875 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNR 163 (320)
Q Consensus 85 Vi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~-i~~~t~ld~~r 163 (320)
|+++||.||+||++|+|++..|+++++++++.+.+++ |+++++++|||+|++||+++++ +++|++| |+++|.||++|
T Consensus 73 VvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~-~d~ivlVvtNPvD~~ty~~~k~-sg~p~~rvig~gt~LDsaR 150 (313)
T COG0039 73 VVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYA-PDAIVLVVTNPVDILTYIAMKF-SGFPKNRVIGSGTVLDSAR 150 (313)
T ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhC-CCeEEEEecCcHHHHHHHHHHh-cCCCccceecccchHHHHH
Confidence 9999999999999999999999999999999999999 8999999999999999999996 8999999 78899999999
Q ss_pred HHHHHHHHcCCCCCCeeeeEEEcCCCCccccccccccccCCCCCcchhhhcc-cchhhhhHHHHHHhhhhHHHHhcCCcc
Q 020875 164 ALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVK-DDAWLNGEFITTVQQRGAAIIKARKLS 242 (320)
Q Consensus 164 ~~~~~a~~l~v~~~~v~~~~v~G~hg~~~~~~~S~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~i~~~kg~~ 242 (320)
|++++|+++++++++|++++ +||||++|||+||+++| +|+|+.+++. ++.|..+++.+++|++|++|++.||++
T Consensus 151 ~~~~lae~~~v~~~~V~~~V-iGeHGdt~vp~~S~a~v----~G~pl~~~~~~~~~~~~~~i~~~v~~~g~eII~~kG~~ 225 (313)
T COG0039 151 FRTFLAEKLGVSPKDVHAYV-IGEHGDTMVPLWSQATV----GGKPLEELLKEDTEEDLEELIERVRNAGAEIIEAKGAG 225 (313)
T ss_pred HHHHHHHHhCCChhHceeeE-eccCCCceEEeeeeeeE----CCEEHHHHhhcccHhHHHHHHHHHHhhHHHHHHccCcc
Confidence 99999999999999999986 79999999999999999 9999999998 567888999999999999999999874
Q ss_pred chHHHHHHHHHHHHHHHhCCCCCcEEEEEEecCCccCCCCceEEEEEEEEe-CCeEEEecCCCCChhhhhcccCccc
Q 020875 243 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCR-NGEWTIVQGTDAILYPMSFLSPIAF 318 (320)
Q Consensus 243 ~~~~~a~a~~~~i~~~i~~~~~~~i~~~~v~~~g~yg~~~~v~~s~P~~i~-~G~~~~~~~~~L~~~E~~~l~~~~~ 318 (320)
+++++|.|++++.++++. |+++++|+|+|++|+||+ +|+|||+|+++| +|+++++ ++.|+++||++|+.++.
T Consensus 226 t~~~~A~a~a~~~~ail~--d~~~vl~~s~~l~G~yg~-~dv~~gvP~~lg~~Gv~~ii-e~~l~~~E~~~l~~s~~ 298 (313)
T COG0039 226 TYYGPAAALARMVEAILR--DEKRVLPVSVYLDGEYGV-EDVYFGVPAVLGKNGVEEIL-ELLLSDDEQEKLDKSAE 298 (313)
T ss_pred chhhHHHHHHHHHHHHHc--CCCceEEEEEeecCccCc-CCeEEEeeEEEcCCCcEEEe-cCCCCHHHHHHHHHHHH
Confidence 677889999987776555 578999999999999995 899999999999 9999999 89999999999998764
No 5
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=100.00 E-value=1.9e-69 Score=512.01 Aligned_cols=307 Identities=40% Similarity=0.619 Sum_probs=280.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCC--eEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCC
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQP--VILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTG 81 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~--~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~ 81 (320)
++.||+||||+|+||+++++.|+.+++++.++. .|++|+|+++ ++++|+++||.|...++..++.++++.+++++|
T Consensus 99 ~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~--~~a~G~amDL~daa~~~~~~v~i~~~~ye~~kd 176 (444)
T PLN00112 99 KLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSK--QALEGVAMELEDSLYPLLREVSIGIDPYEVFQD 176 (444)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCc--chhHHHHHHHHHhhhhhcCceEEecCCHHHhCc
Confidence 578999999779999999999999966664432 3899999875 789999999999986665677777788999999
Q ss_pred CcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhh-hcCCCeEEEEEcCcchhhHHHHHHHCCCCCCCc-EEEeehh
Q 020875 82 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQ-HAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRL 159 (320)
Q Consensus 82 aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~-~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~-i~~~t~l 159 (320)
||+||++||.|++++++|.|++..|+++++++++.|.+ ++ |++++|++|||+|++|+++++. ++++++| |+++|.|
T Consensus 177 aDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~-p~~ivIVVsNPvDv~t~v~~k~-sg~~~~rViGtgT~L 254 (444)
T PLN00112 177 AEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVAS-RNVKVIVVGNPCNTNALICLKN-APNIPAKNFHALTRL 254 (444)
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEEcCCcHHHHHHHHHHH-cCCCCcceEEeeccH
Confidence 99999999999999999999999999999999999999 56 8999999999999999999997 6677766 7899999
Q ss_pred hHHHHHHHHHHHcCCCCCCeeeeEEEcCCCCccccccccccccCCCCCcchhhhcccchhhhhHHHHHHhhhhHHHHhcC
Q 020875 160 DHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKAR 239 (320)
Q Consensus 160 d~~r~~~~~a~~l~v~~~~v~~~~v~G~hg~~~~~~~S~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~k 239 (320)
|++||++++|+++++++++|+..+||||||++|||+||+++| +|+|+.+++.+++|++++|.++++++|++|++.|
T Consensus 255 DsaR~r~~LA~~l~V~~~~V~~~~V~GeHGdsqvp~wS~a~V----~G~pl~e~i~~~~~~~~ei~~~v~~~g~~Ii~~k 330 (444)
T PLN00112 255 DENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKI----NGLPVKEVITDHKWLEEEFTPKVQKRGGVLIKKW 330 (444)
T ss_pred HHHHHHHHHHHHhCcCHHHcccceEEecCCCceeeccceeEE----CCccHHHhhccccchHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999997755799999999999999999 9999999988777888999999999999999999
Q ss_pred CccchHHHHHHHHHHHHHHHhCCCCCcEEEEEEecCC-ccCCCCceEEEEEEEEe-CCeEEEecCCCCChhhhhcccCcc
Q 020875 240 KLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTCR-NGEWTIVQGTDAILYPMSFLSPIA 317 (320)
Q Consensus 240 g~~~~~~~a~a~~~~i~~~i~~~~~~~i~~~~v~~~g-~yg~~~~v~~s~P~~i~-~G~~~~~~~~~L~~~E~~~l~~~~ 317 (320)
|+|+|+++|.++++++.+|+.+.|+++++|+|++++| +||+++|+|||+||++| +|+|+++++++|+++|+++|+.+|
T Consensus 331 G~t~~~s~a~ai~~~I~ail~~~d~~~vlpvsv~l~G~~YGi~~dv~~SvPvvig~~Gv~~Iv~el~L~~~E~~~l~~Sa 410 (444)
T PLN00112 331 GRSSAASTAVSIADAIKSLVTPTPEGDWFSTGVYTDGNPYGIAEGLVFSMPCRSKGDGDYEIVKDVEIDDYLRERIKKSE 410 (444)
T ss_pred CchhHHHHHHHHHHHHHHHHcCCCCCeEEEEEEEeCCcccCCCCCeEEEeEEEEeCCeeEEECCCCCCCHHHHHHHHHHH
Confidence 9888878899999999998866689999999999999 59988999999999999 999999967999999999999887
Q ss_pred c
Q 020875 318 F 318 (320)
Q Consensus 318 ~ 318 (320)
.
T Consensus 411 ~ 411 (444)
T PLN00112 411 A 411 (444)
T ss_pred H
Confidence 4
No 6
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=7.5e-69 Score=495.04 Aligned_cols=310 Identities=55% Similarity=0.859 Sum_probs=280.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCc
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aD 83 (320)
+|+||+||||+|+||+++++.|+.+++++.++..|++|+|++++.+++.|+++||.|...+...+++++++.+++++|||
T Consensus 1 ~p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daD 80 (322)
T cd01338 1 KPVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDDPNVAFKDAD 80 (322)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEecCcHHHhCCCC
Confidence 47899999977999999999999999986555569999999876677999999999998666556777778899999999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCCcEEEeehhhHHH
Q 020875 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNR 163 (320)
Q Consensus 84 vVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~i~~~t~ld~~r 163 (320)
+||++||.+++++++|.+++..|+++++++++.++++++|++++|++|||+|++|++++++++++|+++++|.|.||++|
T Consensus 81 ivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~sg~~p~~~ViG~t~LDs~R 160 (322)
T cd01338 81 WALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKNAPDIPPDNFTAMTRLDHNR 160 (322)
T ss_pred EEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHHcCCCChHheEEehHHHHHH
Confidence 99999999999999999999999999999999999998459999999999999999999973369999988889999999
Q ss_pred HHHHHHHHcCCCCCCeeeeEEEcCCCCccccccccccccCCCCCcchhhhcccchhhhhHHHHHHhhhhHHHHhcCCccc
Q 020875 164 ALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSS 243 (320)
Q Consensus 164 ~~~~~a~~l~v~~~~v~~~~v~G~hg~~~~~~~S~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~~~ 243 (320)
|++.+|+++|+++.+|++++||||||++++|+||++++ +|+|+.+++.+++|.+++|.+++++++++|++.||+|+
T Consensus 161 l~~~la~~lgv~~~~v~~~~V~GeHG~s~vp~~S~~~v----~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~kG~t~ 236 (322)
T cd01338 161 AKSQLAKKAGVPVTDVKNMVIWGNHSPTQYPDFTNATI----GGKPAAEVINDRAWLEDEFIPTVQKRGAAIIKARGASS 236 (322)
T ss_pred HHHHHHHHhCcChhHeEEEEEEeCCcccEEEehhhcEE----CCEeHHHhcChHhhHHHHHHHHHHhhHHHHHhCcCCcc
Confidence 99999999999999999987899999999999999999 99999988877667788999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCcEEEEEEecCCccCCCCceEEEEEEEEe-CCeEEEecCCCCChhhhhcccCccc
Q 020875 244 ALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCR-NGEWTIVQGTDAILYPMSFLSPIAF 318 (320)
Q Consensus 244 ~~~~a~a~~~~i~~~i~~~~~~~i~~~~v~~~g~yg~~~~v~~s~P~~i~-~G~~~~~~~~~L~~~E~~~l~~~~~ 318 (320)
|+++++++++++.+++.++++++++|+|++++|+||+|+|+|||+||++| +|+++++ +++|+++|+++|+.+|.
T Consensus 237 ~~~~a~a~~~iv~ail~~~~~~~i~~~sv~~~g~yg~~~~v~~s~P~~ig~~Gv~~i~-~l~L~~~E~~~l~~s~~ 311 (322)
T cd01338 237 AASAANAAIDHMRDWVLGTPEGDWFSMAVPSDGSYGIPEGLIFSFPVRSKGGGYEIVE-GLEIDDFAREKIDATLA 311 (322)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCccCCCCCeEEEEEEEEeCCEEEEEe-CCCCCHHHHHHHHHHHH
Confidence 87655688888887776432369999999999999999999999999999 7777776 89999999999998874
No 7
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=2.6e-68 Score=491.66 Aligned_cols=307 Identities=56% Similarity=0.871 Sum_probs=273.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcEE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDvV 85 (320)
.||+||||+|+||+++++.|+.+++++.+...+++|+|++++.++++++++|+.|...+..+.++++.+.+++++|||+|
T Consensus 1 ~KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~~aDiV 80 (323)
T cd00704 1 LHVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVITTDPEEAFKDVDVA 80 (323)
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEEecChHHHhCCCCEE
Confidence 48999998899999999999999987643445799999975446789999999999766655566767889999999999
Q ss_pred EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCC-CCCCcEEEeehhhHHHH
Q 020875 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS-IPAKNITCLTRLDHNRA 164 (320)
Q Consensus 86 i~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~-~~~~~i~~~t~ld~~r~ 164 (320)
||+||.|++++++|.+++..|+++++++++.++++++|++++|++|||+|++|++++++ ++ +|++|++|+|.||++||
T Consensus 81 VitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~-sg~~p~~~vig~t~LDs~R~ 159 (323)
T cd00704 81 ILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGNPANTNALIALKN-APNLPPKNFTALTRLDHNRA 159 (323)
T ss_pred EEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHHHHHH-cCCCCHHHEEEeeHHHHHHH
Confidence 99999999999999999999999999999999999548999999999999999999997 67 69999878899999999
Q ss_pred HHHHHHHcCCCCCCeeeeEEEcCCCCccccccccccccCCCCCcchhhhc---ccchhhhhHHHHHHhhhhHHHHhcCCc
Q 020875 165 LGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV---KDDAWLNGEFITTVQQRGAAIIKARKL 241 (320)
Q Consensus 165 ~~~~a~~l~v~~~~v~~~~v~G~hg~~~~~~~S~~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~v~~~~~~i~~~kg~ 241 (320)
|+++|++++++|++|++++||||||++|+|+||+++| +|.|+.++. .+++|.+++|.+++++++++|++.||+
T Consensus 160 r~~la~~l~v~~~~V~~~~V~GeHG~s~v~~~S~~~v----~g~~~~~~~~~~~~~~~~~~~i~~~v~~~~~~Ii~~kg~ 235 (323)
T cd00704 160 KAQVARKLGVRVSDVKNVIIWGNHSNTQVPDLSNAVV----YGPGGTEWVLDLLDEEWLNDEFVKTVQKRGAAIIKKRGA 235 (323)
T ss_pred HHHHHHHhCcCHHHceeeeEEecccCceeecccccee----cCccHHHhcccccChHHHHHHHHHHHHhhHHHHHhccCc
Confidence 9999999999999997766799999999999999999 999998875 344677889999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHhCCCCCcEEEEEEecCCcc-CCCCceEEEEEEEEe-CCeEEEecCCCCChhhhhcccCccc
Q 020875 242 SSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSY-NVPAGLIYSFPVTCR-NGEWTIVQGTDAILYPMSFLSPIAF 318 (320)
Q Consensus 242 ~~~~~~a~a~~~~i~~~i~~~~~~~i~~~~v~~~g~y-g~~~~v~~s~P~~i~-~G~~~~~~~~~L~~~E~~~l~~~~~ 318 (320)
|+|+++|.++++++.+++.+.+.++++|||++++|+| |+|+|+|||+||+|| +|+++++ +++|+++|+++|++++.
T Consensus 236 t~~~~~a~a~~~iv~ail~~~~~~~v~~~s~~~~g~y~gi~~~v~~s~P~~ig~~Gv~~v~-~l~L~~~E~~~l~~s~~ 313 (323)
T cd00704 236 SSAASAAKAIADHVKDWLFGTPPGEIVSMGVYSPGNPYGIPPGIVFSFPCTCKGGGWHVVE-DLKLNDWLREKLKATEE 313 (323)
T ss_pred chhHHHHHHHHHHHHHHHhCCCCCcEEEEEEEeCCccCCCCCceEEEEEEEEcCCEEEEec-CCCCCHHHHHHHHHHHH
Confidence 9987778999988888776432239999999999999 998999999999999 7776666 89999999999998874
No 8
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=6.6e-68 Score=490.09 Aligned_cols=310 Identities=67% Similarity=1.033 Sum_probs=276.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCc
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aD 83 (320)
+|.||+||||+|+||+++++.|+.+++++.+...+|+|+|++++.+++.++.+|+.|...+...+++...+++++++|||
T Consensus 1 ~~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aD 80 (325)
T cd01336 1 EPIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVD 80 (325)
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhCCCC
Confidence 47899999988999999999999988764223348999999765566788899999987666567777778889999999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCCcEEEeehhhHHH
Q 020875 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNR 163 (320)
Q Consensus 84 vVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~i~~~t~ld~~r 163 (320)
+|||+||.+++++++|.+++..|+++++++++.++++++|++++|++|||+|++|++++++.+++|+++|+++|.||+.|
T Consensus 81 iVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~~~~~~~~~ig~gt~LDs~R 160 (325)
T cd01336 81 VAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTNALILLKYAPSIPKENFTALTRLDHNR 160 (325)
T ss_pred EEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHHHHHHHHHHcCCCCHHHEEeeehHHHHH
Confidence 99999999999999999999999999999999999997579999999999999999999986788888899999999999
Q ss_pred HHHHHHHHcCCCCCCeeeeEEEcCCCCccccccccccccCCCC----CcchhhhcccchhhhhHHHHHHhhhhHHHHhcC
Q 020875 164 ALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAG----EKPVRELVKDDAWLNGEFITTVQQRGAAIIKAR 239 (320)
Q Consensus 164 ~~~~~a~~l~v~~~~v~~~~v~G~hg~~~~~~~S~~~v~~~~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~k 239 (320)
+++++|++|++++++|++++||||||++|||+||++++ + |+|+.+++.++.|.+++|.+++++++++|++.|
T Consensus 161 ~r~~la~~l~v~~~~v~~~~V~GeHG~s~~~~~S~~~v----~~~~~g~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~~ 236 (325)
T cd01336 161 AKSQIALKLGVPVSDVKNVIIWGNHSSTQYPDVNHATV----ELNGKGKPAREAVKDDAWLNGEFISTVQKRGAAVIKAR 236 (325)
T ss_pred HHHHHHHHhCcChhhceEeEEEEcCCCCeeecccccee----ecCCCCccHHHHhcccchhHHHHHHHHHhhHHHHHHcc
Confidence 99999999999999998887899999999999999999 8 999999987766778999999999999999975
Q ss_pred CccchHHHHHHHHHHHHHHHhCCCCCcEEEEEEecCCccCCCCceEEEEEEEEe-CCeEEEecCCCCChhhhhcccCccc
Q 020875 240 KLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCR-NGEWTIVQGTDAILYPMSFLSPIAF 318 (320)
Q Consensus 240 g~~~~~~~a~a~~~~i~~~i~~~~~~~i~~~~v~~~g~yg~~~~v~~s~P~~i~-~G~~~~~~~~~L~~~E~~~l~~~~~ 318 (320)
+.++++++|.++++++++++.++++++++|+|++++|+||+|+|+|||+||++| +|+.+++ +++||++||++|+.+|.
T Consensus 237 ~g~t~~~~a~~~~~i~~ail~~~~~~~v~~vs~~~~g~yg~~~~v~~s~P~~ig~~Gv~~i~-~~~L~~~E~~~l~~s~~ 315 (325)
T cd01336 237 KLSSAMSAAKAICDHVHDWWFGTPEGEFVSMGVYSDGSYGVPEGLIFSFPVTCKNGKWKIVQ-GLSIDDFSREKIDATAK 315 (325)
T ss_pred ccchHHHHHHHHHHHHHHHHcCCCCCeEEEEEEecCCCcCCCCceEEEEEEEEeCCEEEEec-CCCCCHHHHHHHHHHHH
Confidence 545566778999988887776434689999999999999999999999999999 7777776 89999999999998874
No 9
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=100.00 E-value=3.4e-67 Score=484.36 Aligned_cols=308 Identities=70% Similarity=1.095 Sum_probs=273.3
Q ss_pred EEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcEEE
Q 020875 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAV 86 (320)
Q Consensus 7 kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDvVi 86 (320)
||+||||+|+||+++++.|+.+++++.+++.+++|+|++++.++++++++|+.|...+....+..+++.+++++|||+||
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~~aDiVV 80 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMDCAFPLLDGVVPTHDPAVAFTDVDVAI 80 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhcccchhcCceeccCChHHHhCCCCEEE
Confidence 69999988999999999999988875323347999999776667899999999998655555555557789999999999
Q ss_pred EeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCCcEEEeehhhHHHHHH
Q 020875 87 MVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALG 166 (320)
Q Consensus 87 ~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~i~~~t~ld~~r~~~ 166 (320)
++||.|++++++|.+++..|+++++++++.|+++++|++++|++|||+|+||+++++++.++|++.|+++|.||++||++
T Consensus 81 itAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~~~sg~~~~~vig~gt~LDs~R~r~ 160 (324)
T TIGR01758 81 LVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPANTNALVLSNYAPSIPPKNFSALTRLDHNRALA 160 (324)
T ss_pred EcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHHHHHcCCCCcceEEEeeehHHHHHHH
Confidence 99999999999999999999999999999999995489999999999999999999974455555589999999999999
Q ss_pred HHHHHcCCCCCCeeeeEEEcCCCCccccccccccccCCCC-C---cchhhhcccchhhhhHHHHHHhhhhHHHHhcCCcc
Q 020875 167 QISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAG-E---KPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLS 242 (320)
Q Consensus 167 ~~a~~l~v~~~~v~~~~v~G~hg~~~~~~~S~~~v~~~~~-~---~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~~ 242 (320)
++|++++++|++|++.+||||||++|||+||+++| + | +|+.+++.++.|+++++.+++++++++|++.||++
T Consensus 161 ~la~~l~v~~~~V~~~~V~GeHG~s~v~~~S~~~v----~~g~~~~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k~~~ 236 (324)
T TIGR01758 161 QVAERAGVPVSDVKNVIIWGNHSSTQYPDVNHATV----TKGGKQKPVREAIKDDAYLDGEFITTVQQRGAAIIRARKLS 236 (324)
T ss_pred HHHHHhCCChhhceEeEEEECCCCCccccccccee----cCCCCccCHHHHhcchhhHHHHHHHHHHhCHHHHHhccCCC
Confidence 99999999999998756799999999999999999 8 8 99999987765777899999999999999988766
Q ss_pred chHHHHHHHHHHHHHHHhCCCCCcEEEEEEecCCc-cCCCCceEEEEEEEEeCCeEEEecCCCCChhhhhcccCccc
Q 020875 243 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPVTCRNGEWTIVQGTDAILYPMSFLSPIAF 318 (320)
Q Consensus 243 ~~~~~a~a~~~~i~~~i~~~~~~~i~~~~v~~~g~-yg~~~~v~~s~P~~i~~G~~~~~~~~~L~~~E~~~l~~~~~ 318 (320)
+++++|.++++++++++.+.|+++++|+|++++|+ ||+|+|+|||+||++|+|+|+++.+++|+++|+++|+.+|.
T Consensus 237 t~~~ia~~~~~i~~ai~~~~~~~~i~~vs~~~~g~~yg~~~~v~~s~P~~ig~g~~~~i~el~L~~~E~~~l~~s~~ 313 (324)
T TIGR01758 237 SALSAAKAAVDQMHDWVLGTPEGTFVSMGVYSDGSPYGVPKGLIFSFPVTCKNGEWKIVEGLCVDDSSRKKLALTAK 313 (324)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEEEeecCCcccCCCCceEEEEEEEEcCCeEEEecCCCCCHHHHHHHHHHHH
Confidence 66788899998888777544789999999999999 99988999999999999889988789999999999998874
No 10
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=2e-66 Score=491.07 Aligned_cols=307 Identities=34% Similarity=0.612 Sum_probs=278.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCc
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aD 83 (320)
+|.||+||||+|.+|++|++.|+.+.++|.++...++|+|++++.++++|+++||.|+++++..++.++++.+++++|||
T Consensus 122 ~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~~~~~ea~~daD 201 (452)
T cd05295 122 NPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVTTDLDVAFKDAH 201 (452)
T ss_pred CceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEEECCHHHhCCCC
Confidence 57899999999999999999999999999888889999999656789999999999998777667788888899999999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCC-CeEEEEEcCcchhhHHHHHHHCCCCCCCcEEEeehhhHH
Q 020875 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAP-NCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHN 162 (320)
Q Consensus 84 vVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~-~~~viv~snP~~~~~~~~~~~~~~~~~~~i~~~t~ld~~ 162 (320)
+||++||.|++++++|.|++..|+++++++++.|.+++++ +.++|++|||+|++|++++++++++|++||+|.+.+|++
T Consensus 202 vvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPvD~~t~i~~k~apgiP~~rVig~gtlds~ 281 (452)
T cd05295 202 VIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFLNLKTSILIKYAPSIPRKNIIAVARLQEN 281 (452)
T ss_pred EEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHHHHcCCCCHHHEEEecchHHH
Confidence 9999999999999999999999999999999999999942 567777889999999999998779999998888779999
Q ss_pred HHHHHHHHHcCCCCCCeeeeEEEcCCCCccccccccccccCCCCC------------cchhhhcccchhhhhHHHHHHhh
Q 020875 163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGE------------KPVRELVKDDAWLNGEFITTVQQ 230 (320)
Q Consensus 163 r~~~~~a~~l~v~~~~v~~~~v~G~hg~~~~~~~S~~~v~~~~~~------------~~~~~~~~~~~~~~~~~~~~v~~ 230 (320)
|+++++|+++|+++++|+.++||||||++|||+||+++| +| +|+.+++.++.|..+++.+.+++
T Consensus 282 R~r~~LA~kl~V~~~~V~~~~VwGeHG~sqvpd~S~a~V----~G~~~a~~~p~~~~~pl~e~i~d~~w~~~~~~~~v~~ 357 (452)
T cd05295 282 RAKALLARKLNVNSAGIKDVIVWGNIGGNTYIDLSKARV----YRYDSAIWGPPNYSRPVLELVHDSKWINGEFVATLKS 357 (452)
T ss_pred HHHHHHHHHhCcCHHHceeeEEEEccCCceeeeeeEEEE----cccccccccccccCccHHHHhcchhhhHHHHHHHHHH
Confidence 999999999999999998777899999999999999999 55 99999987778888999999999
Q ss_pred hhHHHHhcCCccchHHHHHHHHHHHHHHHhCCCCCcEEEEEEecCCccCCCCceEEEEEEEEeCCeEEEecCCCCChhhh
Q 020875 231 RGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGTDAILYPM 310 (320)
Q Consensus 231 ~~~~i~~~kg~~~~~~~a~a~~~~i~~~i~~~~~~~i~~~~v~~~g~yg~~~~v~~s~P~~i~~G~~~~~~~~~L~~~E~ 310 (320)
++. ++|| ++++++|.|+++++++|+.++++++++|+||+++|+||+|+|+|||+||++++|.|+++.+++|+++||
T Consensus 358 rg~---~rkg-sT~~siA~A~~~iv~ail~~t~~~~ilsvsv~sdG~YGip~gv~~S~Pviig~~Gve~V~~L~L~e~E~ 433 (452)
T cd05295 358 LSS---SLNH-EAAISPAHAIATTLSYWYHGSPPGEIFSLGVISEGWYGIPEGIVFSMPVKFQNGSWEVVTDLELSEILR 433 (452)
T ss_pred HHH---hccC-ChHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeeccccCCcCCEEEEEEEEEeCCeEEEEeCCCCCHHHH
Confidence 988 5566 456678999999999998865568999999999999999999999999999966677777999999999
Q ss_pred hcccCccc
Q 020875 311 SFLSPIAF 318 (320)
Q Consensus 311 ~~l~~~~~ 318 (320)
++|+.++.
T Consensus 434 ~kL~~S~~ 441 (452)
T cd05295 434 EVLKRITS 441 (452)
T ss_pred HHHHHHHH
Confidence 99998764
No 11
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=7.3e-66 Score=472.23 Aligned_cols=292 Identities=19% Similarity=0.283 Sum_probs=262.6
Q ss_pred EEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCC-cceEEeCChhhhcCCCcEE
Q 020875 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL-KGVVATTDAVEACTGVNIA 85 (320)
Q Consensus 7 kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~-~~v~~~~~~~~al~~aDvV 85 (320)
||+|+|| |+||+++++.|+.+++++ |++|+|+++ ++++|+++||.|...... .++.++.+.+++++|||+|
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~-----elvL~Di~~--~~a~g~a~DL~~~~~~~~~~~~~i~~~~y~~~~~aDiv 72 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFS-----EIVLIDVNE--GVAEGEALDFHHATALTYSTNTKIRAGDYDDCADADII 72 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCC-----EEEEEeCCc--chhhHHHHHHHhhhccCCCCCEEEEECCHHHhCCCCEE
Confidence 7999995 999999999999999875 999999974 678999999999764432 3556655678999999999
Q ss_pred EEeCCCCCCCCCC--HHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCCc-EEEeehhhHH
Q 020875 86 VMVGGFPRKEGME--RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHN 162 (320)
Q Consensus 86 i~~ag~~~~~~~~--r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~-i~~~t~ld~~ 162 (320)
|++||.|++++++ |.|++..|+++++++++.+.+++ |++++|++|||+|+||+++++. +++|++| |+.+|.||++
T Consensus 73 vitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~-p~~i~ivvsNPvDv~t~~~~k~-sg~p~~rviG~gt~LDs~ 150 (307)
T cd05290 73 VITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVT-KEAVIILITNPLDIAVYIAATE-FDYPANKVIGTGTMLDTA 150 (307)
T ss_pred EECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEecCcHHHHHHHHHHH-hCcChhheecccchHHHH
Confidence 9999999999998 69999999999999999999999 8999999999999999999996 8999999 5677999999
Q ss_pred HHHHHHHHHcCCCCCCeeeeEEEcCCCCccccccccccccCCCCCcchhhhcc--c-chhhhhHHHHHHhhhhHHHHhcC
Q 020875 163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVK--D-DAWLNGEFITTVQQRGAAIIKAR 239 (320)
Q Consensus 163 r~~~~~a~~l~v~~~~v~~~~v~G~hg~~~~~~~S~~~v~~~~~~~~~~~~~~--~-~~~~~~~~~~~v~~~~~~i~~~k 239 (320)
||++++|+++|++|++|+++ ||||||++|||+||+++| +|+|+.+++. + +.|.++++.++++++|++|++.|
T Consensus 151 R~~~~la~~l~v~~~~V~~~-ViGeHGds~vp~wS~~~v----~g~~l~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~K 225 (307)
T cd05290 151 RLRRIVADKYGVDPKNVTGY-VLGEHGSHAFPVWSLVNI----AGLPLDELEALFGKEPIDKDELLEEVVQAAYDVFNRK 225 (307)
T ss_pred HHHHHHHHHhCCCcccEEEE-EEecCCCceEEeeeeeEE----CCEEHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999999999999998 589999999999999999 9999999874 2 34457899999999999999999
Q ss_pred CccchHHHHHHHHHHHHHHHhCCCCCcEEEEEEecCCccCCCCceEEEEEEEEe-CCeEEEecCCCCChhhhhcccCccc
Q 020875 240 KLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCR-NGEWTIVQGTDAILYPMSFLSPIAF 318 (320)
Q Consensus 240 g~~~~~~~a~a~~~~i~~~i~~~~~~~i~~~~v~~~g~yg~~~~v~~s~P~~i~-~G~~~~~~~~~L~~~E~~~l~~~~~ 318 (320)
|+|+|.+ |.++++++.+++. ++++++|+|++++|+||. +++|+|+||+++ +|+++++ +++||++||++|+++|.
T Consensus 226 G~t~~~i-a~a~~~ii~ail~--d~~~v~~vsv~~~G~yg~-~~v~~svP~~ig~~Gv~~i~-~l~L~~~E~~~l~~s~~ 300 (307)
T cd05290 226 GWTNAGI-AKSASRLIKAILL--DERSILPVCTLLSGEYGL-SDVALSLPTVIGAKGIERVL-EIPLDEWELEKLHKSAK 300 (307)
T ss_pred CeehHHH-HHHHHHHHHHHHh--CCCeEEEEEEeeCCccCC-CCEEEEEEEEEeCCCceEec-CCCCCHHHHHHHHHHHH
Confidence 9888754 6888887776554 578999999999999994 899999999999 9999998 79999999999998874
No 12
>TIGR01771 L-LDH-NAD L-lactate dehydrogenase. This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.
Probab=100.00 E-value=1.2e-64 Score=463.36 Aligned_cols=289 Identities=21% Similarity=0.277 Sum_probs=262.4
Q ss_pred EEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcEEEEeC
Q 020875 10 VTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVG 89 (320)
Q Consensus 10 IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDvVi~~a 89 (320)
||| +|+||+++++.|+.+++++ |++|+|+++ ++++|+++||+|...+...++.++.+.+++++|||+||++|
T Consensus 1 iIG-aG~VG~~~a~~l~~~~l~~-----el~L~Di~~--~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daDivVita 72 (299)
T TIGR01771 1 IIG-AGNVGSSTAFALLNQGIAD-----EIVLIDINK--DKAEGEAMDLQHAASFLPTPKKIRSGDYSDCKDADLVVITA 72 (299)
T ss_pred CCC-cCHHHHHHHHHHHhcCCCC-----EEEEEeCCC--ChhhHHHHHHHHhhcccCCCeEEecCCHHHHCCCCEEEECC
Confidence 689 5999999999999999875 999999974 67899999999998666666666667789999999999999
Q ss_pred CCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCCcE-EEeehhhHHHHHHHH
Q 020875 90 GFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLDHNRALGQI 168 (320)
Q Consensus 90 g~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~i-~~~t~ld~~r~~~~~ 168 (320)
|.|++++++|.|++..|+++++++++.+++++ |++++|++|||+|++|++++++ +++|++|+ +.+|.||+.|+++++
T Consensus 73 g~~rk~g~~R~dll~~N~~i~~~~~~~i~~~~-p~~~vivvsNP~d~~t~~~~~~-sg~p~~~viG~gt~LDs~R~~~~l 150 (299)
T TIGR01771 73 GAPQKPGETRLELVGRNVRIMKSIVPEVVKSG-FDGIFLVATNPVDILTYVAWKL-SGFPKNRVIGSGTVLDTARLRYLL 150 (299)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHHHH-hCCCHHHEEeccchHHHHHHHHHH
Confidence 99999999999999999999999999999998 8999999999999999999996 79999995 666999999999999
Q ss_pred HHHcCCCCCCeeeeEEEcCCCCccccccccccccCCCCCcchhhhccc----chhhhhHHHHHHhhhhHHHHhcCCccch
Q 020875 169 SEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD----DAWLNGEFITTVQQRGAAIIKARKLSSA 244 (320)
Q Consensus 169 a~~l~v~~~~v~~~~v~G~hg~~~~~~~S~~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~v~~~~~~i~~~kg~~~~ 244 (320)
|+++++++.+|+++ ||||||++|||+||+++| +|+|+.+++.+ .+|.++++.++++++|++|++.||+|+|
T Consensus 151 a~~l~v~~~~V~~~-v~GeHG~s~vp~~S~~~v----~g~pl~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~~kG~t~~ 225 (299)
T TIGR01771 151 AEKLGVDPQSVHAY-IIGEHGDSEVPVWSSATI----GGVPLLDYLKAKGTETDLDLEEIEKEVRDAAYEIINRKGATYY 225 (299)
T ss_pred HHHhCcCcCeEEEE-EEecCCCceeeceeeeEE----CCEEHHHHhhhcccccHHHHHHHHHHHHHHHHHHhhcCCeeeH
Confidence 99999999999998 599999999999999999 99999998754 2344678999999999999999998876
Q ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEEEEecCCccCCCCceEEEEEEEEe-CCeEEEecCCCCChhhhhcccCccc
Q 020875 245 LSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCR-NGEWTIVQGTDAILYPMSFLSPIAF 318 (320)
Q Consensus 245 ~~~a~a~~~~i~~~i~~~~~~~i~~~~v~~~g~yg~~~~v~~s~P~~i~-~G~~~~~~~~~L~~~E~~~l~~~~~ 318 (320)
. +|.++++++++++. ++++++|+|++++|+||+ +|+|||+||+|| +|+++++ +++|+++||++|+++|.
T Consensus 226 ~-~a~a~~~~i~ail~--d~~~v~~~s~~~~g~yg~-~~~~~s~P~~ig~~Gv~~i~-~l~L~~~E~~~l~~s~~ 295 (299)
T TIGR01771 226 G-IGMAVARIVEAILH--DENRVLPVSAYLDGEYGI-KDVYIGVPAVLGRNGVEEII-ELPLSDEEKEAFQKSAE 295 (299)
T ss_pred H-HHHHHHHHHHHHHc--CCCcEEEEEEEecccCCC-CCEEEEEEEEEeCCeeEEEc-cCCCCHHHHHHHHHHHH
Confidence 5 46788888776664 578999999999999998 699999999999 9999999 79999999999998874
No 13
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=100.00 E-value=1.3e-63 Score=460.00 Aligned_cols=297 Identities=22% Similarity=0.298 Sum_probs=265.8
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcC
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT 80 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~ 80 (320)
|++.++||+|||| |.||+++++.|+..++.+ |++|+|+++ +++.|+++|+.|+.... .++.++.+.+++++
T Consensus 2 ~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~-----el~L~D~~~--~~~~g~~~Dl~~~~~~~-~~~~i~~~~~~~~~ 72 (315)
T PRK00066 2 MKKQHNKVVLVGD-GAVGSSYAYALVNQGIAD-----ELVIIDINK--EKAEGDAMDLSHAVPFT-SPTKIYAGDYSDCK 72 (315)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHhcCCCC-----EEEEEeCCC--chhHHHHHHHHhhcccc-CCeEEEeCCHHHhC
Confidence 6778899999995 999999999999999864 999999974 67899999999987333 45666667789999
Q ss_pred CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCCcE-EEeehh
Q 020875 81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRL 159 (320)
Q Consensus 81 ~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~i-~~~t~l 159 (320)
|||+||++||.|++++++|.+++..|+++++++++.+++++ |++++|++|||+|+++++++++ +++|++|+ +.+|.|
T Consensus 73 ~adivIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~-~~~~vivvsNP~d~~~~~~~k~-sg~p~~~viG~gt~L 150 (315)
T PRK00066 73 DADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASG-FDGIFLVASNPVDILTYATWKL-SGFPKERVIGSGTSL 150 (315)
T ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccCcHHHHHHHHHHH-hCCCHHHEeecCchH
Confidence 99999999999999999999999999999999999999998 8999999999999999999996 78999996 566999
Q ss_pred hHHHHHHHHHHHcCCCCCCeeeeEEEcCCCCccccccccccccCCCCCcchhhhcccchhh----hhHHHHHHhhhhHHH
Q 020875 160 DHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWL----NGEFITTVQQRGAAI 235 (320)
Q Consensus 160 d~~r~~~~~a~~l~v~~~~v~~~~v~G~hg~~~~~~~S~~~v~~~~~~~~~~~~~~~~~~~----~~~~~~~v~~~~~~i 235 (320)
|+.|+++.+|+++|+++++|+++ ||||||++++|+||++++ +|+|+.+++.+..|. ++++.+++++++++|
T Consensus 151 Ds~R~~~~la~~l~v~~~~V~~~-viGeHG~s~v~~~S~~~v----~g~~l~~~~~~~~~~~~~~~~~i~~~v~~~g~~i 225 (315)
T PRK00066 151 DSARFRYMLSEKLDVDPRSVHAY-IIGEHGDTEFPVWSHANV----AGVPLEEYLEENEQYDEEDLDEIFENVRDAAYEI 225 (315)
T ss_pred HHHHHHHHHHHHhCCCcccEEEE-EEecCCCcceecceeceE----CCEEHHHHhhhccCcCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998 589999999999999999 999999987654332 457999999999999
Q ss_pred HhcCCccchHHHHHHHHHHHHHHHhCCCCCcEEEEEEecCCccCCCCceEEEEEEEEe-CCeEEEecCCCCChhhhhccc
Q 020875 236 IKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCR-NGEWTIVQGTDAILYPMSFLS 314 (320)
Q Consensus 236 ~~~kg~~~~~~~a~a~~~~i~~~i~~~~~~~i~~~~v~~~g~yg~~~~v~~s~P~~i~-~G~~~~~~~~~L~~~E~~~l~ 314 (320)
++.||+|+|. +|.++++++.+++. ++++++|+|++++|+||. +++|||+||++| +|+++++ +++||++||++|+
T Consensus 226 i~~kg~t~~~-~a~~~~~i~~ail~--~~~~v~~~sv~~~g~yg~-~~v~~S~Pv~ig~~Gv~~i~-~l~L~~~E~~~L~ 300 (315)
T PRK00066 226 IEKKGATYYG-IAMALARITKAILN--NENAVLPVSAYLEGQYGE-EDVYIGVPAVVNRNGIREIV-ELPLNDDEKQKFA 300 (315)
T ss_pred HhcCCeehHH-HHHHHHHHHHHHHc--CCCeEEEEEEEeccccCC-CCEEEEeEEEEeCCcEEEEc-CCCCCHHHHHHHH
Confidence 9999988865 57888877766554 678999999999999995 899999999999 8888888 7999999999999
Q ss_pred Cccc
Q 020875 315 PIAF 318 (320)
Q Consensus 315 ~~~~ 318 (320)
+++.
T Consensus 301 ~s~~ 304 (315)
T PRK00066 301 HSAD 304 (315)
T ss_pred HHHH
Confidence 8764
No 14
>PLN02602 lactate dehydrogenase
Probab=100.00 E-value=1.7e-63 Score=462.71 Aligned_cols=292 Identities=22% Similarity=0.320 Sum_probs=258.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeC-ChhhhcCCCcE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT-DAVEACTGVNI 84 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~-~~~~al~~aDv 84 (320)
+||+||| +|.||+++++.|+.+++.+ |++|+|+++ +++.|+++||.|+...... ..+.. ..+++++|||+
T Consensus 38 ~KI~IIG-aG~VG~~~a~~l~~~~l~~-----el~LiDi~~--~~~~g~a~DL~~~~~~~~~-~~i~~~~dy~~~~daDi 108 (350)
T PLN02602 38 TKVSVVG-VGNVGMAIAQTILTQDLAD-----ELALVDVNP--DKLRGEMLDLQHAAAFLPR-TKILASTDYAVTAGSDL 108 (350)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCCC-----EEEEEeCCC--chhhHHHHHHHhhhhcCCC-CEEEeCCCHHHhCCCCE
Confidence 7999999 5999999999999998875 999999974 6789999999998743322 34432 34788999999
Q ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCCcE-EEeehhhHHH
Q 020875 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLDHNR 163 (320)
Q Consensus 85 Vi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~i-~~~t~ld~~r 163 (320)
||++||.+++++++|.|++..|+++++++++.+++++ |++++|++|||+|++|++++++ +++|++|+ +.+|.||++|
T Consensus 109 VVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~-p~~ivivvtNPvdv~t~~~~k~-sg~p~~rviG~gt~LDs~R 186 (350)
T PLN02602 109 CIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKYS-PDTILLIVSNPVDVLTYVAWKL-SGFPANRVIGSGTNLDSSR 186 (350)
T ss_pred EEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCchHHHHHHHHHH-hCCCHHHEEeecchHHHHH
Confidence 9999999999999999999999999999999999998 8999999999999999999997 68999996 5568999999
Q ss_pred HHHHHHHHcCCCCCCeeeeEEEcCCCCccccccccccccCCCCCcchhhhcccc------hhhhhHHHHHHhhhhHHHHh
Q 020875 164 ALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDD------AWLNGEFITTVQQRGAAIIK 237 (320)
Q Consensus 164 ~~~~~a~~l~v~~~~v~~~~v~G~hg~~~~~~~S~~~v~~~~~~~~~~~~~~~~------~~~~~~~~~~v~~~~~~i~~ 237 (320)
+++.+|+++|+++++|+++ ||||||++|||+||++++ +|+|+.+++.+. +| .+++.+++++++++|++
T Consensus 187 ~r~~lA~~l~v~~~~V~~~-ViGeHGds~vp~wS~~~i----~G~pl~~~~~~~~~~~~~~~-~~~i~~~v~~~g~eIi~ 260 (350)
T PLN02602 187 FRFLIADHLDVNAQDVQAY-IVGEHGDSSVALWSSVSV----GGVPVLSFLEKQQIAYEKET-LEEIHRAVVDSAYEVIK 260 (350)
T ss_pred HHHHHHHHhCCCccceeee-EEecCCCceEeeeeeeeE----CCEEHHHHhhccCCccCHHH-HHHHHHHHHHHHHHHHh
Confidence 9999999999999999998 589999999999999999 999999986531 22 47899999999999999
Q ss_pred cCCccchHHHHHHHHHHHHHHHhCCCCCcEEEEEEecCCccCCC-CceEEEEEEEEe-CCeEEEecCCCCChhhhhcccC
Q 020875 238 ARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVP-AGLIYSFPVTCR-NGEWTIVQGTDAILYPMSFLSP 315 (320)
Q Consensus 238 ~kg~~~~~~~a~a~~~~i~~~i~~~~~~~i~~~~v~~~g~yg~~-~~v~~s~P~~i~-~G~~~~~~~~~L~~~E~~~l~~ 315 (320)
.||+|+| ++|.++++++.+++. |+++++|+|++++|+||+| +++|||+||++| +|+++++ +++||++||++|+.
T Consensus 261 ~KG~t~~-gia~a~a~ii~ail~--d~~~v~~vsv~~~g~Yg~~~~~v~~s~P~~ig~~Gi~~i~-~l~L~~~E~~~l~~ 336 (350)
T PLN02602 261 LKGYTSW-AIGYSVASLVRSLLR--DQRRIHPVSVLAKGFHGIDEGDVFLSLPAQLGRNGVLGVV-NVHLTDEEAERLRK 336 (350)
T ss_pred cCCccHH-HHHHHHHHHHHHHHh--cCCCeEEEEEecccccCCCCCCcEEEEEEEEeCCeeEEEe-cCCCCHHHHHHHHH
Confidence 9998775 457888877765544 6799999999999999994 899999999999 9999998 79999999999998
Q ss_pred ccc
Q 020875 316 IAF 318 (320)
Q Consensus 316 ~~~ 318 (320)
+|.
T Consensus 337 sa~ 339 (350)
T PLN02602 337 SAK 339 (350)
T ss_pred HHH
Confidence 864
No 15
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=5.8e-63 Score=454.37 Aligned_cols=295 Identities=23% Similarity=0.279 Sum_probs=261.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCC-cceEEeCChhhhcCCC
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL-KGVVATTDAVEACTGV 82 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~-~~v~~~~~~~~al~~a 82 (320)
..+||+|+| +|+||+++++.|+.+++.. |++|+|+++ +++.|+++||+|+..... ..+..+++ +++++||
T Consensus 2 ~~~Ki~IiG-aG~VG~~~a~~l~~~~~~~-----el~LiD~~~--~~~~g~a~Dl~~~~~~~~~~~v~~~~d-y~~~~~a 72 (312)
T cd05293 2 PRNKVTVVG-VGQVGMACAISILAKGLAD-----ELVLVDVVE--DKLKGEAMDLQHGSAFLKNPKIEADKD-YSVTANS 72 (312)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhcCCCC-----EEEEEeCCc--cHHHHHHHHHHHhhccCCCCEEEECCC-HHHhCCC
Confidence 357999999 5999999999999998864 999999975 678999999999873322 34554444 6789999
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCCcE-EEeehhhH
Q 020875 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLDH 161 (320)
Q Consensus 83 DvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~i-~~~t~ld~ 161 (320)
|+||++||.+++++++|.+++..|+++++++++.+++++ |++++|++|||+|++|++++++ +++|++|+ +.+|.||+
T Consensus 73 divvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~-p~~~vivvsNP~d~~t~~~~k~-sg~p~~~viG~gt~Ld~ 150 (312)
T cd05293 73 KVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYS-PNAILLVVSNPVDIMTYVAWKL-SGLPKHRVIGSGCNLDS 150 (312)
T ss_pred CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEccChHHHHHHHHHHH-hCCCHHHEEecCchHHH
Confidence 999999999999999999999999999999999999998 8999999999999999999996 79999995 55599999
Q ss_pred HHHHHHHHHHcCCCCCCeeeeEEEcCCCCccccccccccccCCCCCcchhhhccc-----chhhhhHHHHHHhhhhHHHH
Q 020875 162 NRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD-----DAWLNGEFITTVQQRGAAII 236 (320)
Q Consensus 162 ~r~~~~~a~~l~v~~~~v~~~~v~G~hg~~~~~~~S~~~v~~~~~~~~~~~~~~~-----~~~~~~~~~~~v~~~~~~i~ 236 (320)
.|+++.+|+++++++.+|++++ |||||++|||+||++++ +|+|+.+++.. +...++++.++++++|++|+
T Consensus 151 ~R~~~~la~~l~v~~~~v~~~v-~GeHG~s~vp~~S~~~i----~g~~l~~~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii 225 (312)
T cd05293 151 ARFRYLIAERLGVAPSSVHGWI-IGEHGDSSVPVWSGVNV----AGVRLQDLNPDIGTDKDPEKWKEVHKQVVDSAYEVI 225 (312)
T ss_pred HHHHHHHHHHhCCChhhEEEEE-eecCCCCccccceeceE----CCEEHHHHhhhccccccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999985 89999999999999999 99999998632 11124789999999999999
Q ss_pred hcCCccchHHHHHHHHHHHHHHHhCCCCCcEEEEEEecCCccCCCCceEEEEEEEEe-CCeEEEecCCCCChhhhhcccC
Q 020875 237 KARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCR-NGEWTIVQGTDAILYPMSFLSP 315 (320)
Q Consensus 237 ~~kg~~~~~~~a~a~~~~i~~~i~~~~~~~i~~~~v~~~g~yg~~~~v~~s~P~~i~-~G~~~~~~~~~L~~~E~~~l~~ 315 (320)
+.||+|+|. +|.++++++.+++. ++++++|+|++++|+||+|.++|||+||++| +|+++++ +++||++||++|+.
T Consensus 226 ~~kg~t~~~-~a~a~~~ii~ail~--d~~~~~~vsv~~~g~yg~~~d~~~svP~~ig~~Gi~~i~-~l~L~~~E~~~l~~ 301 (312)
T cd05293 226 KLKGYTSWA-IGLSVADLVDAILR--NTGRVHSVSTLVKGLHGIEDEVFLSLPCILGENGITHVI-KQPLTEEEQEKLQK 301 (312)
T ss_pred HhcCCchHH-HHHHHHHHHHHHHc--CCCeEEEEEEEeCCccCCCCCeEEEEeEEEeCCceEEEe-cCCCCHHHHHHHHH
Confidence 999988765 57889887776554 5789999999999999999999999999999 9999999 69999999999998
Q ss_pred ccc
Q 020875 316 IAF 318 (320)
Q Consensus 316 ~~~ 318 (320)
++.
T Consensus 302 s~~ 304 (312)
T cd05293 302 SAD 304 (312)
T ss_pred HHH
Confidence 864
No 16
>PLN00135 malate dehydrogenase
Probab=100.00 E-value=3e-63 Score=453.73 Aligned_cols=291 Identities=86% Similarity=1.281 Sum_probs=255.3
Q ss_pred HhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHh
Q 020875 26 ARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSK 105 (320)
Q Consensus 26 ~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDvVi~~ag~~~~~~~~r~~~~~~ 105 (320)
+.+.++|.++...++|+|+++++++++|+++||.|+..+....++.+++.+++++|||+||++||.|++++++|.+++..
T Consensus 3 ~~g~~~g~~~~~~l~L~D~~~~~~~a~g~~~Dl~da~~~~~~~i~~~~~~y~~~~daDiVVitAG~~~k~g~sR~dll~~ 82 (309)
T PLN00135 3 ARGVMLGPDQPVILHMLDIPPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKGVNIAVMVGGFPRKEGMERKDVMSK 82 (309)
T ss_pred ccccccCCCCeEEEEEecCcccccchhhHHHHHHhhhHHhcCCcEecCCHHHHhCCCCEEEEeCCCCCCCCCcHHHHHHH
Confidence 44566776667799999998766889999999999986655566666676899999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhh-cCCCeEEEEEcCcchhhHHHHHHHCCCCCCCc-EEEeehhhHHHHHHHHHHHcCCCCCCeeeeE
Q 020875 106 NVSIYKAQASALEQH-AAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRALGQISEKLNVQVSDVKNVI 183 (320)
Q Consensus 106 n~~~~~~i~~~i~~~-~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~-i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~ 183 (320)
|+++++++++.|+++ + |++++|++|||+|+||+++++. +++|++| |+++|.||++||++++|+++++++++|+..+
T Consensus 83 N~~I~~~i~~~i~~~~~-p~aivivvsNPvDv~t~~~~~~-sg~~~~~vig~gt~LDsaR~r~~la~~l~v~~~~V~~~~ 160 (309)
T PLN00135 83 NVSIYKSQASALEKHAA-PDCKVLVVANPANTNALILKEF-APSIPEKNITCLTRLDHNRALGQISERLGVPVSDVKNVI 160 (309)
T ss_pred HHHHHHHHHHHHHHhcC-CCeEEEEeCCcHHHHHHHHHHH-cCCCCccEEEeeehHHHHHHHHHHHHHhCcChhhceeeE
Confidence 999999999999996 6 8999999999999999999996 7888877 7899999999999999999999999995433
Q ss_pred EEcCCCCccccccccccccCCCCCcchhhhcccchhhhhHHHHHHhhhhHHHHhcCCccchHHHHHHHHHHHHHHHhCCC
Q 020875 184 IWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTP 263 (320)
Q Consensus 184 v~G~hg~~~~~~~S~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~~~~~~~a~a~~~~i~~~i~~~~ 263 (320)
||||||++|||+||+++|+.+.+|+|+.+++.+++|+++++.+++++++++|+++|+.++++++|.++++++++++.++|
T Consensus 161 VlGeHG~s~v~~~S~a~v~~~~~g~p~~e~~~~~~~~~~~i~~~v~~~g~~Ii~~~kg~t~~~ia~a~~~iv~ai~~~~~ 240 (309)
T PLN00135 161 IWGNHSSTQYPDVNHATVKTPSGEKPVRELVADDAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTP 240 (309)
T ss_pred EEEcCCCceeeccccceEecCCCCcCHHHHhCchhhHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHhCCc
Confidence 69999999999999999954447999999876666778999999999999999984434456778999998888777546
Q ss_pred CCcEEEEEEecCCccCCCCceEEEEEEEEeCCeEEEecCCCCChhhhhcccCccc
Q 020875 264 EGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGTDAILYPMSFLSPIAF 318 (320)
Q Consensus 264 ~~~i~~~~v~~~g~yg~~~~v~~s~P~~i~~G~~~~~~~~~L~~~E~~~l~~~~~ 318 (320)
+++++|+|++++|+||+|+|+|||+||++++|+++.+.+++|+++|+++|+.+|.
T Consensus 241 ~~~v~~vsv~~~g~YGi~~~v~~s~P~vlg~~gve~v~~l~L~~~E~~~l~~S~~ 295 (309)
T PLN00135 241 EGTWVSMGVYSDGSYGVPPGLIYSFPVTCEKGEWSIVQGLSIDEFSRKKMDATAK 295 (309)
T ss_pred CCeEEEEEEEecCccCCcCCeEEEEEEEEECCEEEEecCCCCCHHHHHHHHHHHH
Confidence 7999999999999999988999999999996666666689999999999998874
No 17
>KOG1495 consensus Lactate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=1.9e-63 Score=429.57 Aligned_cols=292 Identities=24% Similarity=0.338 Sum_probs=265.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCC-CcceEEeCChhhhcCCCc
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATTDAVEACTGVN 83 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~-~~~v~~~~~~~~al~~aD 83 (320)
..||.|+| .|.||.+.+..++.+++.+ |++|+|.++ ++++|+.|||+|...++ .+++....| +.+.++++
T Consensus 20 ~~KItVVG-~G~VGmAca~siL~k~Lad-----el~lvDv~~--dklkGE~MDLqH~s~f~~~~~V~~~~D-y~~sa~S~ 90 (332)
T KOG1495|consen 20 HNKITVVG-VGQVGMACAISILLKGLAD-----ELVLVDVNE--DKLKGEMMDLQHGSAFLSTPNVVASKD-YSVSANSK 90 (332)
T ss_pred CceEEEEc-cchHHHHHHHHHHHhhhhh-----ceEEEecCc--chhhhhhhhhccccccccCCceEecCc-ccccCCCc
Confidence 46999999 6999999999999999875 999999985 78999999999987544 467777665 68899999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCCc-EEEeehhhHH
Q 020875 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHN 162 (320)
Q Consensus 84 vVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~-i~~~t~ld~~ 162 (320)
+||+|||..++++++|.+++++|+.+++.+++.+.+|. |+++++++|||+|++||+.|+. ++||++| |+.||+||++
T Consensus 91 lvIiTAGarq~~gesRL~lvQrNV~ifK~iip~lv~yS-pd~~llvvSNPVDilTYv~wKL-SgfP~nRViGsGcnLDsa 168 (332)
T KOG1495|consen 91 LVIITAGARQSEGESRLDLVQRNVDIFKAIIPALVKYS-PDCILLVVSNPVDILTYVTWKL-SGFPKNRVIGSGCNLDSA 168 (332)
T ss_pred EEEEecCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEecCchHHHHHHHHHH-cCCcccceeccCcCccHH
Confidence 99999999888999999999999999999999999997 9999999999999999999996 9999999 6889999999
Q ss_pred HHHHHHHHHcCCCCCCeeeeEEEcCCCCccccccccccccCCCCCcchhhhccc-------chhhhhHHHHHHhhhhHHH
Q 020875 163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD-------DAWLNGEFITTVQQRGAAI 235 (320)
Q Consensus 163 r~~~~~a~~l~v~~~~v~~~~v~G~hg~~~~~~~S~~~v~~~~~~~~~~~~~~~-------~~~~~~~~~~~v~~~~~~i 235 (320)
|||++++++||++|+++++++ +||||++.+|+||.+.+ +|.++.++..+ +.| +++-+++...+|+|
T Consensus 169 RFryLi~~~Lg~~pss~hgwI-iGEHGdSsV~vWSgvni----AGv~l~~l~~~~~t~~d~e~w--~eihK~v~~sayev 241 (332)
T KOG1495|consen 169 RFRYLIGNRLGVHPSSCHGWI-IGEHGDSSVPVWSGVNI----AGVSLKDLNPDLGTDYDPENW--KEIHKQVVDSAYEV 241 (332)
T ss_pred HHHHHHHHHhCCCcccceEEE-eeccCCccceecccccc----cceEHhHhChhhcCCCCHHHH--HHHHHHHHHHHHHH
Confidence 999999999999999999996 79999999999999999 99999998753 346 58999999999999
Q ss_pred HhcCCccchHHHHHHHHHHHHHHHhCCCCCcEEEEEEecCCccCCCCceEEEEEEEEe-CCeEEEecCCCCChhhhhccc
Q 020875 236 IKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCR-NGEWTIVQGTDAILYPMSFLS 314 (320)
Q Consensus 236 ~~~kg~~~~~~~a~a~~~~i~~~i~~~~~~~i~~~~v~~~g~yg~~~~v~~s~P~~i~-~G~~~~~~~~~L~~~E~~~l~ 314 (320)
++.||+|+|.. +.+++++... |++ +.++++|+|+..+|.||+.+++|||+||+++ +|+..++ +..|+++|+++|+
T Consensus 242 iklKGyTswaI-glsva~l~~a-il~-n~~~i~~Vst~~kg~~gI~~dVflSlPc~l~~~Gi~~vv-~~~Lt~~E~akL~ 317 (332)
T KOG1495|consen 242 IKLKGYTSWAI-GLSVADLAQA-ILR-NLRRIHPVSTMVKGLYGIDDDVFLSLPCLLGANGITHVV-KQKLTDEEVAKLK 317 (332)
T ss_pred HHhcCchHHHH-HHHHHHHHHH-HHh-CcCceeeeeeccccccCCCCceEEecceeecCCchhhhh-cccCCHHHHHHHH
Confidence 99999999865 6888876654 554 6799999999999999998899999999999 9999998 8999999999999
Q ss_pred Cccc
Q 020875 315 PIAF 318 (320)
Q Consensus 315 ~~~~ 318 (320)
.+|.
T Consensus 318 kSa~ 321 (332)
T KOG1495|consen 318 KSAK 321 (332)
T ss_pred HHHH
Confidence 9875
No 18
>TIGR01756 LDH_protist lactate dehydrogenase. This model represents a family of protist lactate dehydrogenases which have aparrently evolved from a recent protist malate dehydrogenase ancestor. Lactate dehydrogenase converts the hydroxyl at C-2 of lactate to a carbonyl in the product, pyruvate. The preference of this enzyme for NAD or NADP has not been determined. A critical residue in malate dehydrogenase, arginine-91 (T. vaginalis numbering) has been mutated to a leucine, eliminating the positive charge which complemeted the carboxylate in malate which is absent in lactate. Several other more subtle changes are proposed to make the active site smaller to accomadate the less bulky lactate molecule.
Probab=100.00 E-value=1.2e-62 Score=450.85 Aligned_cols=291 Identities=36% Similarity=0.620 Sum_probs=255.6
Q ss_pred HHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcEEEEeCCCCCCCCCCHHHH
Q 020875 23 PMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDV 102 (320)
Q Consensus 23 ~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDvVi~~ag~~~~~~~~r~~~ 102 (320)
++|.++.++| ++...++|+|+++++++++|+++||.|+..+.......+++++++++|||+||++||.|++++++|.++
T Consensus 3 ~~~~~g~~~g-~~~~~l~L~D~~~~~~~a~g~a~Dl~d~~~~~~~~~i~~~~~~~~~~daDiVVitaG~~~k~g~tR~dl 81 (313)
T TIGR01756 3 HWIANGDLYG-NRPVCLHLLEIPPALNRLEALAMELEDCAFPNLAGTIVTTKLEEAFKDIDCAFLVASVPLKPGEVRADL 81 (313)
T ss_pred ceeccCcccC-CCeEEEEEecCCCccchhHhHHHHHHHhccccCCceEecCCHHHHhCCCCEEEECCCCCCCcCCCHHHH
Confidence 4566777788 777899999998777899999999999983333233445666689999999999999999999999999
Q ss_pred HHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHH-HHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 103 MSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK-EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 103 ~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~-~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
+..|+++++++++.|++++++++++|++|||+|++|++++ + .+++|++.|+++|.||++||++++|++++++|++|++
T Consensus 82 l~~N~~I~~~i~~~i~~~a~~~~ivivvtNPvDv~t~v~~~~-~sg~p~~vig~gt~LDsaR~r~~la~~l~v~~~~V~~ 160 (313)
T TIGR01756 82 LTKNTPIFKATGEALSEYAKPTVKVLVIGNPVNTNCLVAMLH-APKLSAENFSSLCMLDHNRAVSRIASKLKVPVDHIYH 160 (313)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCeEEEEeCCchHHHHHHHHHH-cCCCCHHHEEecccHHHHHHHHHHHHHhCcChhheee
Confidence 9999999999999999999666899999999999999994 6 6999988789999999999999999999999999988
Q ss_pred eEEEcCCCCccccccccccccCCCCCcchhhh--cccchhhhhHHHHHHhhhhHHHHhcCCccchHHHHHHHHHHHHHHH
Q 020875 182 VIIWGNHSSSQYPDVNHATVNTAAGEKPVREL--VKDDAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWV 259 (320)
Q Consensus 182 ~~v~G~hg~~~~~~~S~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~i~~~kg~~~~~~~a~a~~~~i~~~i 259 (320)
++||||||++|||+||+++|+. +|.|+..+ +. ++|.++++.+++++++++|++.||+|+|+++|.++++++++|+
T Consensus 161 ~~V~GeHG~s~vp~~S~~~V~~--~G~~~~~~~~~~-~~~~~~~i~~~v~~~g~~Ii~~kg~t~~~~~a~ai~~iv~ail 237 (313)
T TIGR01756 161 VVVWGNHAESMVADLTHAEFTK--NGKHQKVFDELC-RDYPEPDFFEVIAQRAWKILEMRGFTSAASPVKASLQHMKAWL 237 (313)
T ss_pred eEEEECCCCceeecccccEEec--CCeehhHhhhcC-cHhHHHHHHHHHHHHHHHHHhCcCCcchHHHHHHHHHHHHHHh
Confidence 8679999999999999999832 67776544 42 3466889999999999999999999988877789999999888
Q ss_pred hCCCCCcEEEEEEecC--CccCCCCceEEEEEEEEe-CCeEEEecCCCCChhhhhcccCccc
Q 020875 260 LGTPEGTWVSMGVYSD--GSYNVPAGLIYSFPVTCR-NGEWTIVQGTDAILYPMSFLSPIAF 318 (320)
Q Consensus 260 ~~~~~~~i~~~~v~~~--g~yg~~~~v~~s~P~~i~-~G~~~~~~~~~L~~~E~~~l~~~~~ 318 (320)
.++++++++|+|++++ |+||+|+|+|||+||++| +|+|+++++++|+++||++|+.+|.
T Consensus 238 ~~~~~~~i~pvsv~l~~~g~YGi~~~v~~s~P~vig~~Gv~~ive~l~L~~~E~~~l~~Sa~ 299 (313)
T TIGR01756 238 FGTRPGEVLSMGIPVPEGNPYGIKPGVIFSFPCTVDEDGKVHVVENFELNPWLKTKLAQTEK 299 (313)
T ss_pred cCCCCCeEEEEEEEecCCCccCCCCCEEEEEEEEEeCCceEEEcCCCCCCHHHHHHHHHHHH
Confidence 8667889999999996 399998899999999999 9999999559999999999998874
No 19
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=100.00 E-value=8.3e-62 Score=447.85 Aligned_cols=293 Identities=24% Similarity=0.351 Sum_probs=261.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcEE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDvV 85 (320)
+||+|+| +|.+|+++++.|+..++.. +|+|+|+++ +++++.++|+.|...+...........++++++||+|
T Consensus 1 ~kI~IIG-aG~vG~~~a~~l~~~g~~~-----ei~l~D~~~--~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aDIV 72 (306)
T cd05291 1 RKVVIIG-AGHVGSSFAYSLVNQGIAD-----ELVLIDINE--EKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDADIV 72 (306)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhcCCCC-----EEEEEeCCc--chhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCCEE
Confidence 4899999 5999999999999988753 899999975 6789999999998754444444444567889999999
Q ss_pred EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCCcE-EEeehhhHHHH
Q 020875 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLDHNRA 164 (320)
Q Consensus 86 i~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~i-~~~t~ld~~r~ 164 (320)
|+++|.|++++++|.+++.+|+++++++++.+++++ |++++|++|||+|++|++++++ +++|++|+ +.+|.||+.|+
T Consensus 73 Iitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~-~~~~vivvsNP~d~~~~~~~~~-~g~p~~~v~g~gt~LDs~R~ 150 (306)
T cd05291 73 VITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASG-FDGIFLVASNPVDVITYVVQKL-SGLPKNRVIGTGTSLDTARL 150 (306)
T ss_pred EEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEecChHHHHHHHHHHH-hCcCHHHEeeccchHHHHHH
Confidence 999999999999999999999999999999999998 8999999999999999999996 89999995 66699999999
Q ss_pred HHHHHHHcCCCCCCeeeeEEEcCCCCccccccccccccCCCCCcchhhhcccchhh---hhHHHHHHhhhhHHHHhcCCc
Q 020875 165 LGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWL---NGEFITTVQQRGAAIIKARKL 241 (320)
Q Consensus 165 ~~~~a~~l~v~~~~v~~~~v~G~hg~~~~~~~S~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~i~~~kg~ 241 (320)
++++|+++++++.+|+++ ||||||++++|+||++++ +|+|+.+++.+..|. ++++.++++++|++|++.||+
T Consensus 151 ~~~la~~l~v~~~~v~~~-V~G~Hg~s~~~~~S~~~v----~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~ii~~kg~ 225 (306)
T cd05291 151 RRALAEKLNVDPRSVHAY-VLGEHGDSQFVAWSTVTV----GGKPLLDLLKEGKLSELDLDEIEEDVRKAGYEIINGKGA 225 (306)
T ss_pred HHHHHHHHCCCcccceEE-EEecCCCceeecceeeEE----cCEEHHHHhhccccChHHHHHHHHHHHHHHHHHHHccCc
Confidence 999999999999999997 699999999999999999 999999988654443 578999999999999999998
Q ss_pred cchHHHHHHHHHHHHHHHhCCCCCcEEEEEEecCCccCCCCceEEEEEEEEe-CCeEEEecCCCCChhhhhcccCccc
Q 020875 242 SSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCR-NGEWTIVQGTDAILYPMSFLSPIAF 318 (320)
Q Consensus 242 ~~~~~~a~a~~~~i~~~i~~~~~~~i~~~~v~~~g~yg~~~~v~~s~P~~i~-~G~~~~~~~~~L~~~E~~~l~~~~~ 318 (320)
|+|. +|.++++++.+++. ++++++|+|++++|+||. +|+|||+||++| +|+++++ +++|+++||++|++++.
T Consensus 226 t~~~-~a~a~~~~~~ail~--~~~~v~~~s~~~~g~yg~-~~v~~s~P~~ig~~Gv~~i~-~~~l~~~E~~~l~~s~~ 298 (306)
T cd05291 226 TYYG-IATALARIVKAILN--DENAILPVSAYLDGEYGE-KDVYIGVPAIIGRNGVEEVI-ELDLTEEEQEKFEKSAD 298 (306)
T ss_pred cHHH-HHHHHHHHHHHHHc--CCCEEEEEEEEeccccCC-CCEEEEEEEEEeCCCEEEEE-CCCCCHHHHHHHHHHHH
Confidence 8765 46788887776654 678999999999999995 899999999999 9999988 79999999999998864
No 20
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=100.00 E-value=2.8e-61 Score=442.63 Aligned_cols=290 Identities=24% Similarity=0.348 Sum_probs=262.2
Q ss_pred EEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCC-cceEEeCChhhhcCCCcEEE
Q 020875 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL-KGVVATTDAVEACTGVNIAV 86 (320)
Q Consensus 8 I~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~-~~v~~~~~~~~al~~aDvVi 86 (320)
|+|+| +|.||+++++.|+.+++.+ +++|+|+++ +++.++++||.|...+.. ..+...++ +++++|||+||
T Consensus 1 i~iiG-aG~VG~~~a~~l~~~~~~~-----el~l~D~~~--~~~~g~~~DL~~~~~~~~~~~i~~~~~-~~~l~~aDiVI 71 (300)
T cd00300 1 ITIIG-AGNVGAAVAFALIAKGLAS-----ELVLVDVNE--EKAKGDALDLSHASAFLATGTIVRGGD-YADAADADIVV 71 (300)
T ss_pred CEEEC-CCHHHHHHHHHHHhcCCCC-----EEEEEeCCc--cHHHHHHHhHHHhccccCCCeEEECCC-HHHhCCCCEEE
Confidence 57999 5999999999999999865 899999974 678999999999876532 23333344 78999999999
Q ss_pred EeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCCcEEEe-ehhhHHHHH
Q 020875 87 MVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCL-TRLDHNRAL 165 (320)
Q Consensus 87 ~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~i~~~-t~ld~~r~~ 165 (320)
+++|.|++++++|.+++.+|+++++++++.+++++ |++++|++|||+|++|++++++ +++|++|++|. |.+|+.|++
T Consensus 72 itag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~~-p~~~viv~sNP~d~~~~~~~~~-sg~~~~kviG~gt~lDs~r~~ 149 (300)
T cd00300 72 ITAGAPRKPGETRLDLINRNAPILRSVITNLKKYG-PDAIILVVSNPVDILTYVAQKL-SGLPKNRVIGSGTLLDSARFR 149 (300)
T ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccChHHHHHHHHHHH-hCcCHHHEEecCCcHHHHHHH
Confidence 99999999999999999999999999999999999 9999999999999999999996 78999996555 899999999
Q ss_pred HHHHHHcCCCCCCeeeeEEEcCCCCccccccccccccCCCCCcchhhhcccchhhhhHHHHHHhhhhHHHHhcCCccchH
Q 020875 166 GQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSSAL 245 (320)
Q Consensus 166 ~~~a~~l~v~~~~v~~~~v~G~hg~~~~~~~S~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~~~~~ 245 (320)
+.+|+++++++.+|++++ +||||++++|+||++++ +|+|+.+++.+++|..+++.+++++++++|++.||+|+|
T Consensus 150 ~~la~~l~v~~~~v~~~v-iGeHg~s~v~~~S~~~v----~g~p~~~~~~~~~~~~~~l~~~v~~~~~~ii~~kg~t~~- 223 (300)
T cd00300 150 SLLAEKLDVDPQSVHAYV-LGEHGDSQVVAWSTATV----GGLPLEELAPFTKLDLEAIEEEVRTSGYEIIRLKGATNY- 223 (300)
T ss_pred HHHHHHhCCCcccEEEEE-EeccCCceeeeeeeeEE----CCEEHHHhhcccHHHHHHHHHHHHHHHHHHHHccCcchH-
Confidence 999999999999999985 79999999999999999 999999998776778899999999999999999998876
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEEEecCCccCCCCceEEEEEEEEe-CCeEEEecCCCCChhhhhcccCccc
Q 020875 246 SAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCR-NGEWTIVQGTDAILYPMSFLSPIAF 318 (320)
Q Consensus 246 ~~a~a~~~~i~~~i~~~~~~~i~~~~v~~~g~yg~~~~v~~s~P~~i~-~G~~~~~~~~~L~~~E~~~l~~~~~ 318 (320)
++|.++++++.+++. ++++++|+|++++|+||. +++|||+||++| +|+++++ +++|+++||++|++++.
T Consensus 224 ~~a~a~~~~~~ai~~--~~~~v~~~s~~~~g~yg~-~~~~~s~Pv~ig~~Gi~~i~-~l~L~~~E~~~l~~s~~ 293 (300)
T cd00300 224 GIATAIADIVKSILL--DERRVLPVSAVQEGQYGI-EDVALSVPAVVGREGVVRIL-EIPLTEDEEAKLQKSAE 293 (300)
T ss_pred HHHHHHHHHHHHHHc--CCCeEEEEEEEecCccCC-CCEEEEEEEEEeCCCeEEEe-cCCCCHHHHHHHHHHHH
Confidence 568999988877665 578999999999999995 899999999999 9999999 79999999999998874
No 21
>KOG1496 consensus Malate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=7.5e-61 Score=407.07 Aligned_cols=314 Identities=72% Similarity=1.128 Sum_probs=302.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCc
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aD 83 (320)
+|.+|+|+||+|.||+++++.++.+-.+|.++...++|+|+.+..+.++|..|+|.|++.|++..+..+++..++|+|.|
T Consensus 3 epirVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~~~~~~LegV~mELqD~a~PlL~~Vvattd~~~afkdv~ 82 (332)
T KOG1496|consen 3 EPIRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIPPMMSVLEGVKMELQDCALPLLKGVVATTDEVEAFKDVD 82 (332)
T ss_pred CceEEEeecccchhhHHHHHHHcCceeecCCCceEEEeeCCchHHHHHHHHHHHHHhhhhhHHHhhhcccChhhhhccCc
Confidence 67899999999999999999999999999998889999999887788999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCCcEEEeehhhHHH
Q 020875 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNR 163 (320)
Q Consensus 84 vVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~i~~~t~ld~~r 163 (320)
+.|...+.||++|++|.|++..|+++++.-+.++++|++|++++++++||++..+.++.++++.+|.+++-++|.||..|
T Consensus 83 ~ailvGa~PR~eGMERkDll~~NvkIfk~Qg~AL~k~A~~~~KVlVVgNPaNTNali~~k~ApsIP~kNfs~lTRLDhNR 162 (332)
T KOG1496|consen 83 VAILVGAMPRREGMERKDLLSANVKIFKSQGAALEKYAKPNVKVLVVGNPANTNALILKKFAPSIPEKNFSALTRLDHNR 162 (332)
T ss_pred EEEEeccccCcccchhhhHHhhcceeehhhhHHHHHhcCCCceEEEecCccccchhHHhhhCCCCchhcchhhhhhchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCeeeeEEEcCCCCccccccccccccCCCCCcchhhhcccchhhhhHHHHHHhhhhHHHHhcCCccc
Q 020875 164 ALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSS 243 (320)
Q Consensus 164 ~~~~~a~~l~v~~~~v~~~~v~G~hg~~~~~~~S~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~~~ 243 (320)
...++|.++|++.++|++++|||+|+.+|+|+..+++|+...+.+|+.+.+.|+.|+..+|.+.||+||..+++.++.++
T Consensus 163 A~~QlA~klgv~~~~VkNviIWGNHSsTQyPD~~hA~V~~~~~~~~v~e~v~d~~wL~g~Fi~tVQkRGaavi~ark~SS 242 (332)
T KOG1496|consen 163 ALAQLALKLGVPVSDVKNVIIWGNHSSTQYPDVNHATVNTNGGEKPVKEAVKDDAWLQGEFIETVQKRGAAVIKARKLSS 242 (332)
T ss_pred HHHHHHHhhCCchhhcceeEEecccccccCCCccceeeeccCCcccHHHHhccchhhccchhhHHHhcchHhhhhhhhhh
Confidence 99999999999999999999999999999999999999776677999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCcEEEEEEecCCccCCCCceEEEEEEEEeCCeEEEecCCCCChhhhhcccCcc
Q 020875 244 ALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGTDAILYPMSFLSPIA 317 (320)
Q Consensus 244 ~~~~a~a~~~~i~~~i~~~~~~~i~~~~v~~~g~yg~~~~v~~s~P~~i~~G~~~~~~~~~L~~~E~~~l~~~~ 317 (320)
.+|+|.+++++|++|+.+++++++++++|+++|.||+|.|..||+||++.+|.|++++.++++++-++++...+
T Consensus 243 A~SaA~aacDhi~dw~~gTpeG~fvSmgV~sDGsYgip~gli~SfPv~~k~g~wkiVqgl~iddf~r~km~~t~ 316 (332)
T KOG1496|consen 243 AMSAAKAACDHIRDWWFGTPEGTFVSMGVYSDGSYGIPDGLIFSFPVTIKNGDWKIVQGLPIDDFSREKMDLTA 316 (332)
T ss_pred hhhHHHhHhhhhhheecCCCCccEEEEeeecCCCCCCCCCeEEEcceEecCCceEEEcCcchhHHHHHhhhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987654
No 22
>PTZ00117 malate dehydrogenase; Provisional
Probab=100.00 E-value=5.7e-59 Score=430.28 Aligned_cols=293 Identities=24% Similarity=0.361 Sum_probs=256.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCc--ceEEeCChhhhcCC
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLK--GVVATTDAVEACTG 81 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~--~v~~~~~~~~al~~ 81 (320)
+.+||+|+|| |++|+++++.++..++ . +++|+|+++ +++.+.++|+.|....... .++.+++ +++++|
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~-~-----~l~L~Di~~--~~~~g~~lDl~~~~~~~~~~~~i~~~~d-~~~l~~ 73 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNL-G-----DVVLYDVIK--GVPQGKALDLKHFSTLVGSNINILGTNN-YEDIKD 73 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCC-C-----eEEEEECCC--ccchhHHHHHhhhccccCCCeEEEeCCC-HHHhCC
Confidence 4679999995 9999999999998886 2 899999975 5677889999998643332 3444444 569999
Q ss_pred CcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCCcEEEe-ehhh
Q 020875 82 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCL-TRLD 160 (320)
Q Consensus 82 aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~i~~~-t~ld 160 (320)
||+||+++|.+++++++|.|++..|.++++++++.+++++ |++++|++|||+|+++++++++ +++|++|++|. |.||
T Consensus 74 ADiVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~-p~a~vivvsNP~di~t~~~~~~-s~~p~~rviG~gt~ld 151 (319)
T PTZ00117 74 SDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYC-PNAFVICVTNPLDCMVKVFQEK-SGIPSNKICGMAGVLD 151 (319)
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecChHHHHHHHHHHh-hCCCcccEEEecchHH
Confidence 9999999999999999999999999999999999999999 8999999999999999999995 79999996555 5999
Q ss_pred HHHHHHHHHHHcCCCCCCeeeeEEEcCCCCccccccccccccCCCCCcchhhhcccchhh---hhHHHHHHhhhhHHHHh
Q 020875 161 HNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWL---NGEFITTVQQRGAAIIK 237 (320)
Q Consensus 161 ~~r~~~~~a~~l~v~~~~v~~~~v~G~hg~~~~~~~S~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~i~~ 237 (320)
+.|+++.+|++++++|++|++++ +||||++|+|+||++++ +|+|+.+++.++.|. ++++.+++++++++|++
T Consensus 152 s~R~~~~la~~l~v~~~~v~~~v-iGeHg~~~v~~~s~~~v----~g~p~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~ 226 (319)
T PTZ00117 152 SSRFRCNLAEKLGVSPGDVSAVV-IGGHGDLMVPLPRYCTV----NGIPLSDFVKKGAITEKEINEIIKKTRNMGGEIVK 226 (319)
T ss_pred HHHHHHHHHHHhCCCcccceEEE-eecCCCcEEeceeeceE----CCEEHHHHhhccccCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999886 79999999999999999 999999987654343 46799999999999999
Q ss_pred c--CCccchHHHHHHHHHHHHHHHhCCCCCcEEEEEEecCCccCCCCceEEEEEEEEe-CCeEEEecCCCCChhhhhccc
Q 020875 238 A--RKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCR-NGEWTIVQGTDAILYPMSFLS 314 (320)
Q Consensus 238 ~--kg~~~~~~~a~a~~~~i~~~i~~~~~~~i~~~~v~~~g~yg~~~~v~~s~P~~i~-~G~~~~~~~~~L~~~E~~~l~ 314 (320)
. ||.+ ++++|+++++++.+++. ++++++|+|++++|+||+ +|+|||+||++| +|+++++ +++|+++||++|+
T Consensus 227 ~~~kg~t-~~~~a~a~~~~~~ail~--~~~~v~~~s~~~~g~yg~-~~~~~s~P~~ig~~Gv~~i~-~l~l~~~E~~~l~ 301 (319)
T PTZ00117 227 LLKKGSA-FFAPAAAIVAMIEAYLK--DEKRVLVCSVYLNGQYNC-KNLFVGVPVVIGGKGIEKVI-ELELNAEEKELFD 301 (319)
T ss_pred hcCCCCh-HHHHHHHHHHHHHHHhc--CCCeEEEEEEEeccccCC-CCeEEEEEEEEeCCeEEEEe-CCCCCHHHHHHHH
Confidence 7 5655 45778999988776665 578999999999999999 599999999999 8999998 7999999999999
Q ss_pred Cccc
Q 020875 315 PIAF 318 (320)
Q Consensus 315 ~~~~ 318 (320)
++|.
T Consensus 302 ~s~~ 305 (319)
T PTZ00117 302 KSIE 305 (319)
T ss_pred HHHH
Confidence 8874
No 23
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=4.2e-59 Score=429.65 Aligned_cols=292 Identities=21% Similarity=0.297 Sum_probs=258.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcEE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDvV 85 (320)
|||+|+| +|.||+++++.|+..|+.. +++|+|+++ +++++.++|+.|..... ......++.++++++||+|
T Consensus 1 mkI~IIG-aG~VG~~~a~~l~~~g~~~-----ev~l~D~~~--~~~~g~a~dl~~~~~~~-~~~~i~~~d~~~l~~aDiV 71 (308)
T cd05292 1 MKVAIVG-AGFVGSTTAYALLLRGLAS-----EIVLVDINK--AKAEGEAMDLAHGTPFV-KPVRIYAGDYADCKGADVV 71 (308)
T ss_pred CEEEEEC-CCHHHHHHHHHHHHcCCCC-----EEEEEECCc--hhhhhHHHHHHcccccc-CCeEEeeCCHHHhCCCCEE
Confidence 6899999 5999999999999988753 899999974 56788999999885322 2234444557899999999
Q ss_pred EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCCcE-EEeehhhHHHH
Q 020875 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLDHNRA 164 (320)
Q Consensus 86 i~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~i-~~~t~ld~~r~ 164 (320)
|++++.+++++++|.+++..|+++++++++.+++++ |+++++++|||+|+++++++++ +|+|++|+ +.+|.||+.|+
T Consensus 72 iita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~-~~giiiv~tNP~d~~~~~~~~~-sg~p~~~viG~gt~LDs~R~ 149 (308)
T cd05292 72 VITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYA-PDAILLVVTNPVDVLTYVAYKL-SGLPPNRVIGSGTVLDTARF 149 (308)
T ss_pred EEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHH-HCcCHHHeecccchhhHHHH
Confidence 999999999999999999999999999999999998 8999999999999999999996 79999995 66799999999
Q ss_pred HHHHHHHcCCCCCCeeeeEEEcCCCCccccccccccccCCCCCcchhhhcccc-----hhhhhHHHHHHhhhhHHHHhcC
Q 020875 165 LGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDD-----AWLNGEFITTVQQRGAAIIKAR 239 (320)
Q Consensus 165 ~~~~a~~l~v~~~~v~~~~v~G~hg~~~~~~~S~~~v~~~~~~~~~~~~~~~~-----~~~~~~~~~~v~~~~~~i~~~k 239 (320)
++++|+++++++.+|+++ ||||||++|+|+||+++| +|+|+.+++.+. .+.++++.+++++++++|++.|
T Consensus 150 ~~~la~~~~v~~~~v~~~-viGeHg~~~~~~~S~~~v----~g~~~~~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii~~k 224 (308)
T cd05292 150 RYLLGEHLGVDPRSVHAY-IIGEHGDSEVAVWSSANI----GGVPLDEFCKLCGRPFDEEVREEIFEEVRNAAYEIIERK 224 (308)
T ss_pred HHHHHHHhCCCccceece-eeccCCCcEEecceeeeE----CCEEHHHHhhhcccccCHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999998 589999999999999999 999999886541 1336789999999999999999
Q ss_pred CccchHHHHHHHHHHHHHHHhCCCCCcEEEEEEecCCccCCCCceEEEEEEEEe-CCeEEEecCCCCChhhhhcccCccc
Q 020875 240 KLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCR-NGEWTIVQGTDAILYPMSFLSPIAF 318 (320)
Q Consensus 240 g~~~~~~~a~a~~~~i~~~i~~~~~~~i~~~~v~~~g~yg~~~~v~~s~P~~i~-~G~~~~~~~~~L~~~E~~~l~~~~~ 318 (320)
|+|+|. +|.++++++++++. ++++++|+|++++|+||+ +++|||+||+|| +|+++++ +++||++||++|++++.
T Consensus 225 g~t~~~-~a~a~~~i~~ail~--~~~~v~~~s~~~~g~yg~-~~~~~s~P~~ig~~Gv~~i~-~~~L~~~E~~~l~~s~~ 299 (308)
T cd05292 225 GATYYA-IGLALARIVEAILR--DENSVLTVSSLLDGQYGI-KDVALSLPCIVGRSGVERVL-PPPLSEEEEEALRASAE 299 (308)
T ss_pred CccHHH-HHHHHHHHHHHHHc--CCCcEEEEEEEEcccCCC-CCEEEEEEEEEeCCceEEec-CCCCCHHHHHHHHHHHH
Confidence 988754 57888877766554 688999999999999998 799999999999 9999999 79999999999998864
No 24
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=100.00 E-value=9.6e-59 Score=428.30 Aligned_cols=296 Identities=21% Similarity=0.329 Sum_probs=256.6
Q ss_pred CCC-CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCC--cceEEeCChhh
Q 020875 1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL--KGVVATTDAVE 77 (320)
Q Consensus 1 m~~-~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~--~~v~~~~~~~~ 77 (320)
|++ +++||+|+| +|.+|+++++.++..++. +++|+|+++ +++.+.++|+.|...... .++..+++ ++
T Consensus 1 ~~~~~~~KI~IIG-aG~vG~~ia~~la~~gl~------~i~LvDi~~--~~~~~~~ld~~~~~~~~~~~~~I~~~~d-~~ 70 (321)
T PTZ00082 1 MTMIKRRKISLIG-SGNIGGVMAYLIVLKNLG------DVVLFDIVK--NIPQGKALDISHSNVIAGSNSKVIGTNN-YE 70 (321)
T ss_pred CCCCCCCEEEEEC-CCHHHHHHHHHHHhCCCC------eEEEEeCCC--chhhHHHHHHHhhhhccCCCeEEEECCC-HH
Confidence 444 457999999 599999999999988873 799999986 456788999998754332 34554455 58
Q ss_pred hcCCCcEEEEeCCCCCCCCC-----CHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCCc
Q 020875 78 ACTGVNIAVMVGGFPRKEGM-----ERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN 152 (320)
Q Consensus 78 al~~aDvVi~~ag~~~~~~~-----~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~ 152 (320)
+++|||+||+++|.++++++ +|.+++..|+++++++++.+++++ |++++|++|||+|++++.++++ +++|++|
T Consensus 71 ~l~~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~-p~a~~iv~sNP~di~t~~~~~~-sg~p~~r 148 (321)
T PTZ00082 71 DIAGSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYC-PNAFVIVITNPLDVMVKLLQEH-SGLPKNK 148 (321)
T ss_pred HhCCCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHh-cCCChhh
Confidence 99999999999999999998 999999999999999999999999 8899999999999999999985 8999899
Q ss_pred EEEe-ehhhHHHHHHHHHHHcCCCCCCeeeeEEEcCCCCccccccccccccCCCCCcchhhhcccchh---hhhHHHHHH
Q 020875 153 ITCL-TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAW---LNGEFITTV 228 (320)
Q Consensus 153 i~~~-t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~hg~~~~~~~S~~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~v 228 (320)
++|. |.||+.|+++.+|+++++++++|++++ +||||+++||+||++++ +|.|+.+++.++.+ .++++.+++
T Consensus 149 viGlgt~lds~R~~~~la~~l~v~~~~v~~~v-iGeHg~s~v~~~S~~~i----~g~~~~~~~~~~~~~~~~~~~i~~~~ 223 (321)
T PTZ00082 149 VCGMAGVLDSSRLRTYIAEKLGVNPRDVHASV-IGAHGDKMVPLPRYVTV----GGIPLSEFIKKGLITQEEIDEIVERT 223 (321)
T ss_pred EEEecCcccHHHHHHHHHHHhCCCcccceeeE-EecCCCceEecceeeEE----CCEEHHHhhhcccCCHHHHHHHHHHH
Confidence 6544 599999999999999999999999985 79999999999999999 99999998643211 257899999
Q ss_pred hhhhHHHHhcC--CccchHHHHHHHHHHHHHHHhCCCCCcEEEEEEecCCccCCCCceEEEEEEEEe-CCeEEEecCCCC
Q 020875 229 QQRGAAIIKAR--KLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCR-NGEWTIVQGTDA 305 (320)
Q Consensus 229 ~~~~~~i~~~k--g~~~~~~~a~a~~~~i~~~i~~~~~~~i~~~~v~~~g~yg~~~~v~~s~P~~i~-~G~~~~~~~~~L 305 (320)
+++|++|++.| |+|. +++|.++++++++++. |+++++|+|++++|+||+ +++|||+|++|| +|+++++ +++|
T Consensus 224 ~~~g~~i~~~~gkg~t~-~~ia~a~~~i~~ail~--d~~~v~~vs~~~~g~yg~-~~v~~s~P~~ig~~Gv~~i~-~~~l 298 (321)
T PTZ00082 224 RNTGKEIVDLLGTGSAY-FAPAAAAIEMAEAYLK--DKKRVLPCSAYLEGQYGH-KDIYMGTPAVIGANGVEKII-ELDL 298 (321)
T ss_pred HHHHHHHHhhcCCCccH-HHHHHHHHHHHHHHHc--CCCcEEEEEEEecccCCC-CCeEEEEEEEEeCCeEEEEe-CCCC
Confidence 99999999964 5554 5678898877765544 678999999999999999 799999999999 9999999 7999
Q ss_pred ChhhhhcccCccc
Q 020875 306 ILYPMSFLSPIAF 318 (320)
Q Consensus 306 ~~~E~~~l~~~~~ 318 (320)
|++||++|+++|.
T Consensus 299 ~~~E~~~l~~sa~ 311 (321)
T PTZ00082 299 TPEEQKKFDESIK 311 (321)
T ss_pred CHHHHHHHHHHHH
Confidence 9999999998874
No 25
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=100.00 E-value=8.4e-59 Score=426.39 Aligned_cols=290 Identities=24% Similarity=0.353 Sum_probs=253.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCC--CcceEEeCChhhhcCCC
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL--LKGVVATTDAVEACTGV 82 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~--~~~v~~~~~~~~al~~a 82 (320)
.|||+|+| +|.+|+.+++.|+.+|+. +|+|+|+++ +...+..+|+.|..... ...++.++++ +++++|
T Consensus 1 ~~KV~VIG-aG~vG~~iA~~la~~g~~------~VvlvDi~~--~l~~g~a~d~~~~~~~~~~~~~i~~t~d~-~~~~~a 70 (305)
T TIGR01763 1 RKKISVIG-AGFVGATTAFRLAEKELA------DLVLLDVVE--GIPQGKALDMYEASPVGGFDTKVTGTNNY-ADTANS 70 (305)
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHcCCC------eEEEEeCCC--ChhHHHHHhhhhhhhccCCCcEEEecCCH-HHhCCC
Confidence 36999999 599999999999998863 799999974 45677888888765322 2356655665 569999
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCCcEEE-eehhhH
Q 020875 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC-LTRLDH 161 (320)
Q Consensus 83 DvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~i~~-~t~ld~ 161 (320)
|+||+++|.|++++++|.+++..|.++++++++.+.+++ |++++|++|||+|++|++++++ +|+|++|++| +|.||+
T Consensus 71 DiVIitag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~-p~~~iIv~tNP~di~t~~~~~~-sg~~~~rviG~g~~lds 148 (305)
T TIGR01763 71 DIVVITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEHS-PNPIIVVVSNPLDAMTYVAWQK-SGFPKERVIGQAGVLDS 148 (305)
T ss_pred CEEEEcCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHH-HCcCHHHEEEeccchHH
Confidence 999999999999999999999999999999999999998 8999999999999999999996 7999999655 469999
Q ss_pred HHHHHHHHHHcCCCCCCeeeeEEEcCCCCccccccccccccCCCCCcchhhhcccchhhhhHHHHHHhhhhHHHHhc--C
Q 020875 162 NRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKA--R 239 (320)
Q Consensus 162 ~r~~~~~a~~l~v~~~~v~~~~v~G~hg~~~~~~~S~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~--k 239 (320)
+|+++.+|++|++++++|+++ ||||||++|+|+||++++ +|+|+.+++.++. ++++.++++++|++|++. |
T Consensus 149 ~R~~~~la~~l~v~~~~v~~~-v~GeHg~s~~~~wS~~~i----~g~~~~~~~~~~~--~~~l~~~v~~~g~~ii~~~~k 221 (305)
T TIGR01763 149 ARFRTFIAMELGVSVQDVTAC-VLGGHGDAMVPLVRYSTV----AGIPVADLISAER--IAEIVERTRKGGGEIVNLLKQ 221 (305)
T ss_pred HHHHHHHHHHhCcCHHHeeee-EEecCCCcEEeeeeeeEE----CCEEHHHhcCHHH--HHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999998 489999999999999999 9999999876543 478999999999999997 5
Q ss_pred CccchHHHHHHHHHHHHHHHhCCCCCcEEEEEEecCCccCCCCceEEEEEEEEe-CCeEEEecCCCCChhhhhcccCccc
Q 020875 240 KLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCR-NGEWTIVQGTDAILYPMSFLSPIAF 318 (320)
Q Consensus 240 g~~~~~~~a~a~~~~i~~~i~~~~~~~i~~~~v~~~g~yg~~~~v~~s~P~~i~-~G~~~~~~~~~L~~~E~~~l~~~~~ 318 (320)
|+|. +++|.+++++ .++++. |+++++|+|++++|+||+ +++|||+||++| +|+++++ +++|+++||++|+++|.
T Consensus 222 g~t~-~~~a~~~~~i-~~ai~~-~~~~v~~~s~~~~~~yg~-~~v~~s~P~~ig~~Gv~~i~-~~~l~~~E~~~l~~s~~ 296 (305)
T TIGR01763 222 GSAY-YAPAASVVEM-VEAILK-DRKRVLPCAAYLDGQYGI-DGIYVGVPVILGKNGVEHIY-ELKLDQSELALLNKSAK 296 (305)
T ss_pred CChH-HHHHHHHHHH-HHHHhC-CCCeEEEEEEEecccCCC-CceEEEEEEEEeCCeEEEEe-CCCCCHHHHHHHHHHHH
Confidence 5565 4567888754 556765 688999999999999999 799999999999 9999999 69999999999998874
No 26
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=5.3e-59 Score=425.93 Aligned_cols=283 Identities=25% Similarity=0.350 Sum_probs=242.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEe---CChhhhcCCC
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT---TDAVEACTGV 82 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~---~~~~~al~~a 82 (320)
|||+||||+|+||+++++.|+.+++.. |++|+|++ +++|+++||+|...+ ..++.. ++++++++||
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~-----elvLiDi~----~a~g~alDL~~~~~~--~~i~~~~~~~~~y~~~~da 69 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVS-----ELALYDIV----NTPGVAADLSHINTP--AKVTGYLGPEELKKALKGA 69 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCc-----EEEEEecC----ccceeehHhHhCCCc--ceEEEecCCCchHHhcCCC
Confidence 699999977999999999999998864 99999996 578999999998721 245432 3458999999
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhh----HHHHHHHCCCCCCCcEEEeeh
Q 020875 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTN----ALILKEFAPSIPAKNITCLTR 158 (320)
Q Consensus 83 DvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~----~~~~~~~~~~~~~~~i~~~t~ 158 (320)
|+||++||.|++++++|.|++..|+++++++++.+++++ |++++|++|||+|++ ++++++. +++|++|++|.|.
T Consensus 70 DivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~-p~a~vivvtNPvDv~~~i~t~~~~~~-s~~p~~rviG~~~ 147 (310)
T cd01337 70 DVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKAC-PKALILIISNPVNSTVPIAAEVLKKA-GVYDPKRLFGVTT 147 (310)
T ss_pred CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccCchhhHHHHHHHHHHHh-cCCCHHHEEeeec
Confidence 999999999999999999999999999999999999998 899999999999997 7888884 8999999877788
Q ss_pred hhHHHHHHHHHHHcCCCCCCeeeeEEEcCC-CCccccccccccccCCCCCcchhhhcccchhhhhHHHHHHhhhhHHHHh
Q 020875 159 LDHNRALGQISEKLNVQVSDVKNVIIWGNH-SSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIK 237 (320)
Q Consensus 159 ld~~r~~~~~a~~l~v~~~~v~~~~v~G~h-g~~~~~~~S~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~ 237 (320)
||++|+++++|+++|+++++|+++ ||||| |++|||+||++++ . .++ .++ + ++++.++++++|++|++
T Consensus 148 LDs~R~~~~la~~l~v~~~~V~~~-v~GeHsGds~vp~~S~~~~----~----~~~-~~~-~-~~~i~~~v~~~g~~Ii~ 215 (310)
T cd01337 148 LDVVRANTFVAELLGLDPAKVNVP-VIGGHSGVTILPLLSQCQP----P----FTF-DQE-E-IEALTHRIQFGGDEVVK 215 (310)
T ss_pred hHHHHHHHHHHHHhCcCHHHEEEE-EEecCCCCceecccccccc----c----ccC-CHH-H-HHHHHHHHHHHHHHHHh
Confidence 999999999999999999999987 58999 8999999999977 2 222 222 2 57899999999999999
Q ss_pred cC---CccchHHHHHHHHHHHHHHHhC-CCCCcEEEEEEecCCccCCCCceEEEEEEEEe-CCeEEEecCC-CCChhhhh
Q 020875 238 AR---KLSSALSAASSACDHIRDWVLG-TPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCR-NGEWTIVQGT-DAILYPMS 311 (320)
Q Consensus 238 ~k---g~~~~~~~a~a~~~~i~~~i~~-~~~~~i~~~~v~~~g~yg~~~~v~~s~P~~i~-~G~~~~~~~~-~L~~~E~~ 311 (320)
+| |+| ++++|.++++++++++.+ .+++.+++++ +++|+ |. +|+|||+||++| +|+++++ ++ +|+++|++
T Consensus 216 ~k~gkg~t-~~~~a~a~~~iv~aIl~~~~~~~~~~~~s-~~~~~-g~-~~v~~s~P~~ig~~Gv~~i~-~l~~L~~~E~~ 290 (310)
T cd01337 216 AKAGAGSA-TLSMAYAGARFANSLLRGLKGEKGVIECA-YVESD-VT-EAPFFATPVELGKNGVEKNL-GLGKLNDYEKK 290 (310)
T ss_pred CccCCCCc-chhHHHHHHHHHHHHHHhcCCCcceEEEE-EEecc-CC-CceEEEEEEEEeCCeEEEEe-CCCCCCHHHHH
Confidence 85 544 467789999888876643 2355677777 77776 76 799999999999 8988888 79 69999999
Q ss_pred cccCccc
Q 020875 312 FLSPIAF 318 (320)
Q Consensus 312 ~l~~~~~ 318 (320)
+|+.++.
T Consensus 291 ~l~~S~~ 297 (310)
T cd01337 291 LLEAALP 297 (310)
T ss_pred HHHHHHH
Confidence 9998874
No 27
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=100.00 E-value=1.1e-58 Score=426.53 Aligned_cols=295 Identities=25% Similarity=0.380 Sum_probs=261.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCC--cceEEeCChhhhcCCCc
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL--KGVVATTDAVEACTGVN 83 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~--~~v~~~~~~~~al~~aD 83 (320)
|||+|+||+|++|++++..|+.+|+.+ +|+++|+++..+++++..+|+.|...... .+++.+++ ++++++||
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~-----~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d-~~~l~~aD 74 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVK-----EINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSD-LSDVAGSD 74 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCC-----EEEEEECcccccccccccchhhhchhccCCCcEEEECCC-HHHhCCCC
Confidence 799999988999999999999999864 89999996544788999999998743332 24555445 67899999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCCcE-EEeehhhHH
Q 020875 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLDHN 162 (320)
Q Consensus 84 vVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~i-~~~t~ld~~ 162 (320)
+||+++|.|++++++|.+++..|+++++++++.|.+++ |++++|+++||+|++|++++++ +++|++|+ +.+|.||+.
T Consensus 75 iViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~-~~~~viv~~npvd~~t~~~~~~-~g~~~~~viG~gt~LDs~ 152 (309)
T cd05294 75 IVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFA-PDTKILVVTNPVDVMTYKALKE-SGFDKNRVFGLGTHLDSL 152 (309)
T ss_pred EEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCchHHHHHHHHHh-cCCCHHHEeeccchHHHH
Confidence 99999999999999999999999999999999999998 8999999999999999999996 78999996 455899999
Q ss_pred HHHHHHHHHcCCCCCCeeeeEEEcCCCCccccccccccccCCCCCcchhhhcccchhhhhHHHHHHhhhhHHHHhcCCcc
Q 020875 163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLS 242 (320)
Q Consensus 163 r~~~~~a~~l~v~~~~v~~~~v~G~hg~~~~~~~S~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~~ 242 (320)
|+++.+|+++++++++|++++ +||||++|||+||++++ +|+|+.+++..+++.++++.++++++|++|++.||++
T Consensus 153 R~~~~la~~l~v~~~~v~~~v-iGeHg~s~~~~~S~~~i----~g~~~~~~~~~~~~~~~~i~~~v~~~g~~i~~~kg~t 227 (309)
T cd05294 153 RFKVAIAKHFNVHISEVHTRI-IGEHGDSMVPLISSTSI----GGIPIKRFPEYKDFDVEKIVETVKNAGQNIISLKGGS 227 (309)
T ss_pred HHHHHHHHHHCcChHHeEEEE-EecCCCceEeeeeecEE----CCEEHHHhhcccHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 999999999999999999885 79999999999999999 9999999875434567889999999999999999987
Q ss_pred chHHHHHHHHHHHHHHHhCCCCCcEEEEEEecCCcc-CCCCceEEEEEEEEe-CCeEEEecCCCCChhhhhcccCccc
Q 020875 243 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSY-NVPAGLIYSFPVTCR-NGEWTIVQGTDAILYPMSFLSPIAF 318 (320)
Q Consensus 243 ~~~~~a~a~~~~i~~~i~~~~~~~i~~~~v~~~g~y-g~~~~v~~s~P~~i~-~G~~~~~~~~~L~~~E~~~l~~~~~ 318 (320)
.| ++|.++++++..+ ++ +++.++|+|++.+|+| |++ |+++|+||+++ +|+++++ +++|+++||++|++++.
T Consensus 228 ~~-~~a~~~~~ii~ai-l~-~~~~v~~vsv~~~g~~~~~~-~~~~svP~~ig~~Gv~~i~-~l~l~~~E~~~l~~s~~ 300 (309)
T cd05294 228 EY-GPASAISNLVRTI-AN-DERRILTVSTYLEGEIDGIR-DVCIGVPVKLGKNGIEEIV-PIEMDDDEREAFRKSAE 300 (309)
T ss_pred hh-hHHHHHHHHHHHH-HC-CCCeEEEEEEEECCccCCCC-CeEEEeEEEEcCCccEEEe-CCCCCHHHHHHHHHHHH
Confidence 65 6678888777664 44 6789999999999998 996 99999999999 9999999 69999999999998874
No 28
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=100.00 E-value=9.5e-59 Score=425.01 Aligned_cols=283 Identities=25% Similarity=0.329 Sum_probs=242.2
Q ss_pred EEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEe-C--ChhhhcCCCc
Q 020875 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-T--DAVEACTGVN 83 (320)
Q Consensus 7 kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~-~--~~~~al~~aD 83 (320)
||+|+||+|+||+++++.|+.+++.. |++|+|+++ +.|+++||.|... ..++... . +++++++|||
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~-----elvL~Di~~----a~g~a~DL~~~~~--~~~i~~~~~~~~~~~~~~daD 69 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVS-----ELSLYDIAG----AAGVAADLSHIPT--AASVKGFSGEEGLENALKGAD 69 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCc-----EEEEecCCC----CcEEEchhhcCCc--CceEEEecCCCchHHHcCCCC
Confidence 79999977999999999999888764 999999974 5789999999762 2345542 1 3489999999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchh----hHHHHHHHCCCCCCCcEEEeehh
Q 020875 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT----NALILKEFAPSIPAKNITCLTRL 159 (320)
Q Consensus 84 vVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~----~~~~~~~~~~~~~~~~i~~~t~l 159 (320)
+||++||.+++++++|++++..|+++++++++.+.+++ |++++|++|||+|+ +|+++++. +++|++|++|.+.|
T Consensus 70 ivvitaG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~~-p~~iiivvsNPvDv~~~i~t~~~~~~-sg~p~~rViG~g~L 147 (312)
T TIGR01772 70 VVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAESC-PKAMILVITNPVNSTVPIAAEVLKKK-GVYDPNKLFGVTTL 147 (312)
T ss_pred EEEEeCCCCCCCCccHHHHHHHhHHHHHHHHHHHHHhC-CCeEEEEecCchhhHHHHHHHHHHHh-cCCChHHEEeeecc
Confidence 99999999999999999999999999999999999998 89999999999998 88888885 89999998777789
Q ss_pred hHHHHHHHHHHHcCCCCCCeeeeEEEcCCCC-ccccccccccccCCCCCcchhhhcccchhhhhHHHHHHhhhhHHHHhc
Q 020875 160 DHNRALGQISEKLNVQVSDVKNVIIWGNHSS-SQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKA 238 (320)
Q Consensus 160 d~~r~~~~~a~~l~v~~~~v~~~~v~G~hg~-~~~~~~S~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~ 238 (320)
|++||++++|++++++|++|++++ |||||+ +|||+||++++ . |+ +.++ .++++.++++++|++|++.
T Consensus 148 DsaR~r~~la~~l~v~~~~v~~~V-iGeHg~~s~vp~~S~~~~----~--~~---~~~~--~~~~i~~~v~~~g~~Ii~~ 215 (312)
T TIGR01772 148 DIVRANTFVAELKGKDPMEVNVPV-IGGHSGETIIPLISQCPG----K--VL---FTED--QLEALIHRIQNAGTEVVKA 215 (312)
T ss_pred hHHHHHHHHHHHhCCCHHHeEEEE-EEecCCCccccccccccc----c--CC---CCHH--HHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999885 899996 99999999986 3 22 2222 2578999999999999997
Q ss_pred C---CccchHHHHHHHHHHHHHHHhC-CCCCcEEEEEEecCCccCCCCceEEEEEEEEe-CCeEEEecCC-CCChhhhhc
Q 020875 239 R---KLSSALSAASSACDHIRDWVLG-TPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCR-NGEWTIVQGT-DAILYPMSF 312 (320)
Q Consensus 239 k---g~~~~~~~a~a~~~~i~~~i~~-~~~~~i~~~~v~~~g~yg~~~~v~~s~P~~i~-~G~~~~~~~~-~L~~~E~~~ 312 (320)
| |+| ++++|.++++++..++.. .+++.++|+ ++++|+||. +++|||+||++| +|+++++ ++ +||++||++
T Consensus 216 k~gkg~t-~~~ia~a~~~iv~ail~~~~d~~~v~~~-s~~~g~yg~-~~v~~s~P~~ig~~Gv~~i~-~~~~L~~~E~~~ 291 (312)
T TIGR01772 216 KAGAGSA-TLSMAFAGARFVLSLVRGLKGEEGVVEC-AYVESDGVT-EATFFATPLLLGKNGVEKRL-GIGKLSSFEEKM 291 (312)
T ss_pred ccCCCCh-hHHHHHHHHHHHHHHHHhhCCCccEEEE-EEEccCCCc-CceEEEEEEEEcCCeeEEEE-ccCCCCHHHHHH
Confidence 4 444 457788888766654431 256799995 599999997 899999999999 9999998 78 899999999
Q ss_pred ccCccc
Q 020875 313 LSPIAF 318 (320)
Q Consensus 313 l~~~~~ 318 (320)
|+.++.
T Consensus 292 l~~S~~ 297 (312)
T TIGR01772 292 LNGALP 297 (312)
T ss_pred HHHHHH
Confidence 998874
No 29
>PTZ00325 malate dehydrogenase; Provisional
Probab=100.00 E-value=1.2e-56 Score=412.23 Aligned_cols=285 Identities=24% Similarity=0.323 Sum_probs=244.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeC---ChhhhcC
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT---DAVEACT 80 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~---~~~~al~ 80 (320)
+|.||+||||+|+||+++++.|+.+++.. +++|+|++ ++.++++||.|.... ..+...+ +++++++
T Consensus 7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~-----elvL~Di~----~~~g~a~Dl~~~~~~--~~v~~~td~~~~~~~l~ 75 (321)
T PTZ00325 7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVS-----ELSLYDIV----GAPGVAADLSHIDTP--AKVTGYADGELWEKALR 75 (321)
T ss_pred CCCEEEEECCCCHHHHHHHHHHhcCCCCC-----EEEEEecC----CCcccccchhhcCcC--ceEEEecCCCchHHHhC
Confidence 46799999977999999999999877754 99999993 467889999997642 2343332 2389999
Q ss_pred CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHH----HHCCCCCCCcEEEe
Q 020875 81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK----EFAPSIPAKNITCL 156 (320)
Q Consensus 81 ~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~----~~~~~~~~~~i~~~ 156 (320)
|+|+||+++|.+++++++|.+++..|+++++++++++++++ |+.+++++|||+|+++++++ + .+++|+++++|.
T Consensus 76 gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~-~~~iviv~SNPvdv~~~~~~~~~~~-~sg~p~~~viG~ 153 (321)
T PTZ00325 76 GADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSA-PKAIVGIVSNPVNSTVPIAAETLKK-AGVYDPRKLFGV 153 (321)
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHhhhhh-ccCCChhheeec
Confidence 99999999999999999999999999999999999999998 88999999999999999985 5 589999998777
Q ss_pred ehhhHHHHHHHHHHHcCCCCCCeeeeEEEcCCCC-ccccccccccccCCCCCcchhhhcccchhhhhHHHHHHhhhhHHH
Q 020875 157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSS-SQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAI 235 (320)
Q Consensus 157 t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~hg~-~~~~~~S~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~i 235 (320)
+.||++||++.+|++++++|++|++++ |||||+ +|||+||++. .|+. ++ .++++.++++++|++|
T Consensus 154 g~LDs~R~r~~la~~l~v~~~~V~~~V-lGeHGd~s~v~~~S~~g-------~~l~----~~--~~~~i~~~v~~~g~~I 219 (321)
T PTZ00325 154 TTLDVVRARKFVAEALGMNPYDVNVPV-VGGHSGVTIVPLLSQTG-------LSLP----EE--QVEQITHRVQVGGDEV 219 (321)
T ss_pred hhHHHHHHHHHHHHHhCcChhheEEEE-EeecCCcccccchhccC-------CCCC----HH--HHHHHHHHHHHHHHHH
Confidence 789999999999999999999999885 899999 8999999973 3553 22 2578999999999999
Q ss_pred HhcCC--ccchHHHHHHHHHHHHHHHhC-CCCCcEEEEEEecCCccCCCCceEEEEEEEEe-CCeEEEecC-CCCChhhh
Q 020875 236 IKARK--LSSALSAASSACDHIRDWVLG-TPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCR-NGEWTIVQG-TDAILYPM 310 (320)
Q Consensus 236 ~~~kg--~~~~~~~a~a~~~~i~~~i~~-~~~~~i~~~~v~~~g~yg~~~~v~~s~P~~i~-~G~~~~~~~-~~L~~~E~ 310 (320)
++.|| .++++++|.++++++.+++.+ .++++++|++ +++|+||+ +++|||+||++| +|+++++ + ++|+++|+
T Consensus 220 i~~k~~kg~t~~g~a~a~~~i~~ail~~~~~~~~v~~~~-~~~g~yg~-~~v~~s~P~~ig~~Gv~~i~-~~~~L~~~E~ 296 (321)
T PTZ00325 220 VKAKEGAGSATLSMAYAAAEWSTSVLKALRGDKGIVECA-FVESDMRP-ECPFFSSPVELGKEGVERVL-PIGPLNAYEE 296 (321)
T ss_pred HhcccCCCCchHHHHHHHHHHHHHHHhhcCCCCCeEEEE-EEecCCCC-CCeEEEEEEEEcCCeeEEEc-CCCCCCHHHH
Confidence 99872 244566789999887776643 2477899985 99999997 899999999999 9999999 6 99999999
Q ss_pred hcccCccc
Q 020875 311 SFLSPIAF 318 (320)
Q Consensus 311 ~~l~~~~~ 318 (320)
++|+.++.
T Consensus 297 ~~l~~S~~ 304 (321)
T PTZ00325 297 ELLEAAVP 304 (321)
T ss_pred HHHHHHHH
Confidence 99998864
No 30
>PLN00106 malate dehydrogenase
Probab=100.00 E-value=3.4e-56 Score=409.58 Aligned_cols=288 Identities=26% Similarity=0.357 Sum_probs=244.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCC-cceEEeCChhhhcCCC
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL-KGVVATTDAVEACTGV 82 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~-~~v~~~~~~~~al~~a 82 (320)
.+.||+||||+|+||+++++.|+.+++.+ |++|+|+++ ++++++||.|...+.. ..+...++++++++||
T Consensus 17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~-----el~L~Di~~----~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~a 87 (323)
T PLN00106 17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVS-----ELHLYDIAN----TPGVAADVSHINTPAQVRGFLGDDQLGDALKGA 87 (323)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCC-----EEEEEecCC----CCeeEchhhhCCcCceEEEEeCCCCHHHHcCCC
Confidence 35799999988999999999999988875 999999974 6788999999875421 2223345678999999
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcch----hhHHHHHHHCCCCCCCcEEEeeh
Q 020875 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN----TNALILKEFAPSIPAKNITCLTR 158 (320)
Q Consensus 83 DvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~----~~~~~~~~~~~~~~~~~i~~~t~ 158 (320)
|+||++||.+++++++|++++..|+++++++++.+++++ |+++++++|||+| ++++.+++. +++|++|++|.+.
T Consensus 88 DiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~-p~aivivvSNPvD~~~~i~t~~~~~~-s~~p~~~viG~~~ 165 (323)
T PLN00106 88 DLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHC-PNALVNIISNPVNSTVPIAAEVLKKA-GVYDPKKLFGVTT 165 (323)
T ss_pred CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCCccccHHHHHHHHHHc-CCCCcceEEEEec
Confidence 999999999999999999999999999999999999999 8999999999999 899988884 8999999988889
Q ss_pred hhHHHHHHHHHHHcCCCCCCeeeeEEEcCCC-CccccccccccccCCCCCcchhhhcccchhhhhHHHHHHhhhhHHHHh
Q 020875 159 LDHNRALGQISEKLNVQVSDVKNVIIWGNHS-SSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIK 237 (320)
Q Consensus 159 ld~~r~~~~~a~~l~v~~~~v~~~~v~G~hg-~~~~~~~S~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~ 237 (320)
||++||++++|+++|+++.+|++++ +|||| ++|||+||++++ . .+ +.++ .++++.++++++|++|++
T Consensus 166 LDs~Rl~~~lA~~lgv~~~~V~~~V-iGeHg~~s~vp~~S~~~~----~----~~-~~~~--~~~~i~~~v~~~g~~Ii~ 233 (323)
T PLN00106 166 LDVVRANTFVAEKKGLDPADVDVPV-VGGHAGITILPLLSQATP----K----VS-FTDE--EIEALTKRIQNGGTEVVE 233 (323)
T ss_pred chHHHHHHHHHHHhCCChhheEEEE-EEeCCCccEeeehhccee----c----cc-CCHH--HHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999985 79996 599999999976 3 12 2222 257899999999999999
Q ss_pred cC--CccchHHHHHHHHHHHHHHHhCC-CCCcEEEEEEecCCccCCCCceEEEEEEEEe-CCeEEEecCC-CCChhhhhc
Q 020875 238 AR--KLSSALSAASSACDHIRDWVLGT-PEGTWVSMGVYSDGSYNVPAGLIYSFPVTCR-NGEWTIVQGT-DAILYPMSF 312 (320)
Q Consensus 238 ~k--g~~~~~~~a~a~~~~i~~~i~~~-~~~~i~~~~v~~~g~yg~~~~v~~s~P~~i~-~G~~~~~~~~-~L~~~E~~~ 312 (320)
.| ..++++++|.+++++++.++.++ +++.++|+| +++|+| +.++|||+||+|| +|+++++ ++ +|+++||++
T Consensus 234 ~k~~kg~t~~~~a~a~~~ii~ail~~~~~~~~v~~~s-~~~~~~--~~~v~~s~P~~ig~~Gv~~i~-~~~~L~~~E~~~ 309 (323)
T PLN00106 234 AKAGAGSATLSMAYAAARFADACLRGLNGEADVVECS-YVQSEV--TELPFFASKVRLGRNGVEEVL-GLGPLSEYEQKG 309 (323)
T ss_pred CccCCCCchHHHHHHHHHHHHHHHhccCCCceEEEEE-EECccc--CCceEEEEEEEEcCCeeEEEc-CCCCCCHHHHHH
Confidence 74 23445677899998887766531 366899999 667775 2349999999999 9999999 67 999999999
Q ss_pred ccCccc
Q 020875 313 LSPIAF 318 (320)
Q Consensus 313 l~~~~~ 318 (320)
|+.++.
T Consensus 310 l~~S~~ 315 (323)
T PLN00106 310 LEALKP 315 (323)
T ss_pred HHHHHH
Confidence 998864
No 31
>PRK06223 malate dehydrogenase; Reviewed
Probab=100.00 E-value=3.6e-55 Score=404.48 Aligned_cols=290 Identities=25% Similarity=0.376 Sum_probs=253.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCC--cceEEeCChhhhcCCC
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL--KGVVATTDAVEACTGV 82 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~--~~v~~~~~~~~al~~a 82 (320)
|+||+|+|| |.+|+++++.++..++. +|+|+|+++ +++++..+|+.|...+.. ..++.+++ ++++++|
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~------ev~L~D~~~--~~~~~~~~dl~~~~~~~~~~~~i~~~~d-~~~~~~a 71 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELG------DVVLFDIVE--GVPQGKALDIAEAAPVEGFDTKITGTND-YEDIAGS 71 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCe------EEEEEECCC--chhHHHHHHHHhhhhhcCCCcEEEeCCC-HHHHCCC
Confidence 479999995 99999999999988762 899999975 567888899988754332 34444445 4789999
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCCcEEEe-ehhhH
Q 020875 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCL-TRLDH 161 (320)
Q Consensus 83 DvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~i~~~-t~ld~ 161 (320)
|+||+++|.|++++++|.+++.+|+++++++++.+++++ |++++|++|||+|++|++++++ +++|++|++|. |.+|+
T Consensus 72 DiVii~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~-~~~~viv~tNP~d~~~~~~~~~-s~~~~~~viG~gt~lds 149 (307)
T PRK06223 72 DVVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYA-PDAIVIVVTNPVDAMTYVALKE-SGFPKNRVIGMAGVLDS 149 (307)
T ss_pred CEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHH-hCCCcccEEEeCCCcHH
Confidence 999999999999999999999999999999999999998 8899999999999999999996 79999996544 79999
Q ss_pred HHHHHHHHHHcCCCCCCeeeeEEEcCCCCccccccccccccCCCCCcchhhhcccchhhhhHHHHHHhhhhHHHHhc--C
Q 020875 162 NRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKA--R 239 (320)
Q Consensus 162 ~r~~~~~a~~l~v~~~~v~~~~v~G~hg~~~~~~~S~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~--k 239 (320)
.|+++.+|+++++++++|++++ +||||++++|+||++++ +|.|+.+++.+ +| .+++.+.+++++++|++. |
T Consensus 150 ~r~~~~la~~l~v~~~~v~~~v-iGehg~s~~p~~S~~~v----~g~~~~~~~~~-~~-~~~l~~~v~~~~~~ii~~~~k 222 (307)
T PRK06223 150 ARFRTFIAEELNVSVKDVTAFV-LGGHGDSMVPLVRYSTV----GGIPLEDLLSK-EK-LDEIVERTRKGGAEIVGLLKT 222 (307)
T ss_pred HHHHHHHHHHhCcChhhCcccE-EcCCCCcceEchhhCEE----CCEEHHHhCCh-HH-HHHHHHHHHHHHHHHHhhccc
Confidence 9999999999999999999985 79999999999999999 99999998643 44 578999999999999997 6
Q ss_pred CccchHHHHHHHHHHHHHHHhCCCCCcEEEEEEecCCccCCCCceEEEEEEEEe-CCeEEEecCCCCChhhhhcccCccc
Q 020875 240 KLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCR-NGEWTIVQGTDAILYPMSFLSPIAF 318 (320)
Q Consensus 240 g~~~~~~~a~a~~~~i~~~i~~~~~~~i~~~~v~~~g~yg~~~~v~~s~P~~i~-~G~~~~~~~~~L~~~E~~~l~~~~~ 318 (320)
+++. +++|.++++++.+ ++. ++++++|+|++++|+||+ +|++||+||+++ +|+++++ +++||++||++|+++|.
T Consensus 223 g~t~-~~~A~~~~~ii~a-il~-~~~~~~~~~v~~~g~yg~-~~~~~s~P~~i~~~Gv~~i~-~~~l~~~e~~~l~~s~~ 297 (307)
T PRK06223 223 GSAY-YAPAASIAEMVEA-ILK-DKKRVLPCSAYLEGEYGV-KDVYVGVPVKLGKNGVEKII-ELELDDEEKAAFDKSVE 297 (307)
T ss_pred CChh-HHHHHHHHHHHHH-HHc-CCCcEEEEEEEecCcCCC-CCeEEEeEEEEeCCeEEEEe-CCCCCHHHHHHHHHHHH
Confidence 6554 5567777776665 444 678999999999999999 899999999999 8888887 79999999999998874
No 32
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=100.00 E-value=3.4e-55 Score=403.12 Aligned_cols=287 Identities=26% Similarity=0.386 Sum_probs=250.8
Q ss_pred EEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCC--cceEEeCChhhhcCCCcEE
Q 020875 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL--KGVVATTDAVEACTGVNIA 85 (320)
Q Consensus 8 I~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~--~~v~~~~~~~~al~~aDvV 85 (320)
|+|+|| |.+|+.+++.|+..++. +|+|+|+++ +++++..+|+.+...... .+++.+++ +++++|||+|
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~------eV~L~Di~e--~~~~g~~~dl~~~~~~~~~~~~I~~t~d-~~~l~dADiV 70 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELG------DVVLLDIVE--GLPQGKALDISQAAPILGSDTKVTGTND-YEDIAGSDVV 70 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCc------EEEEEeCCC--cHHHHHHHHHHHhhhhcCCCeEEEEcCC-HHHhCCCCEE
Confidence 689995 99999999999988762 899999985 567888888888653332 34555555 6789999999
Q ss_pred EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCCcEEEe-ehhhHHHH
Q 020875 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCL-TRLDHNRA 164 (320)
Q Consensus 86 i~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~i~~~-t~ld~~r~ 164 (320)
|+++|.|++++++|.+++..|+++++++++.+++++ |++++|++|||+|++|++++++ +++|++|++|. |.+|+.|+
T Consensus 71 Iit~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~-p~~~iIv~sNP~di~t~~~~~~-s~~~~~rviGlgt~lds~r~ 148 (300)
T cd01339 71 VITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKYA-PNAIVIVVTNPLDVMTYVAYKA-SGFPRNRVIGMAGVLDSARF 148 (300)
T ss_pred EEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHH-hCCCHHHEEEecchHHHHHH
Confidence 999999999999999999999999999999999999 8899999999999999999996 79999996544 59999999
Q ss_pred HHHHHHHcCCCCCCeeeeEEEcCCCCccccccccccccCCCCCcchhhhcccchhhhhHHHHHHhhhhHHHHhcC--Ccc
Q 020875 165 LGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKAR--KLS 242 (320)
Q Consensus 165 ~~~~a~~l~v~~~~v~~~~v~G~hg~~~~~~~S~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~k--g~~ 242 (320)
++.+|++|++++++|++++ +|+||++++|+||++++ +|.|+.+++.++. ++++.+++++++++|++.| |+|
T Consensus 149 ~~~la~~l~v~~~~v~~~v-~G~hg~~~~~~~s~~~v----~g~~~~~~~~~~~--~~~~~~~v~~~~~~ii~~k~~g~t 221 (300)
T cd01339 149 RYFIAEELGVSVKDVQAMV-LGGHGDTMVPLPRYSTV----GGIPLTELITKEE--IDEIVERTRNGGAEIVNLLKTGSA 221 (300)
T ss_pred HHHHHHHhCCCccceEEEE-EeCCCCcceecceecEE----CCEEHHHhcChHH--HHHHHHHHHHHHHHHHhhcCCCch
Confidence 9999999999999999986 79999999999999999 9999999876653 5889999999999999977 666
Q ss_pred chHHHHHHHHHHHHHHHhCCCCCcEEEEEEecCCccCCCCceEEEEEEEEe-CCeEEEecCCCCChhhhhcccCccc
Q 020875 243 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCR-NGEWTIVQGTDAILYPMSFLSPIAF 318 (320)
Q Consensus 243 ~~~~~a~a~~~~i~~~i~~~~~~~i~~~~v~~~g~yg~~~~v~~s~P~~i~-~G~~~~~~~~~L~~~E~~~l~~~~~ 318 (320)
.| ++|.++++++. +++. ++++++|+|++++|+||++ ++|||+||+++ +|+++++ ++.||++||++|+.+|.
T Consensus 222 ~~-~~a~~~~~i~~-ail~-~~~~i~~~s~~~~g~yg~~-~~~~s~P~~ig~~G~~~~~-~l~l~~~E~~~l~~s~~ 293 (300)
T cd01339 222 YY-APAAAIAEMVE-AILK-DKKRVLPCSAYLEGEYGIK-DIFVGVPVVLGKNGVEKII-ELDLTDEEKEAFDKSVE 293 (300)
T ss_pred hH-HHHHHHHHHHH-HHHc-CCCcEEEEEEEeccccCCC-CeEEEEEEEEeCCeEEEEe-CCCCCHHHHHHHHHHHH
Confidence 54 55788876555 4554 6789999999999999995 99999999999 8888887 79999999999998874
No 33
>PRK05086 malate dehydrogenase; Provisional
Probab=100.00 E-value=9.3e-55 Score=400.55 Aligned_cols=283 Identities=23% Similarity=0.300 Sum_probs=240.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHh-cCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEE--eCChhhhcCCC
Q 020875 6 VRVLVTGAAGQIGYALVPMIAR-GVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA--TTDAVEACTGV 82 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~-~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~--~~~~~~al~~a 82 (320)
|||+|+||+|.||+++++.|.. .+.. .+++|+|+++ ...++++|+.|.. ....+.. ..+++++++|+
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~-----~el~L~d~~~---~~~g~alDl~~~~--~~~~i~~~~~~d~~~~l~~~ 70 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAG-----SELSLYDIAP---VTPGVAVDLSHIP--TAVKIKGFSGEDPTPALEGA 70 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCc-----cEEEEEecCC---CCcceehhhhcCC--CCceEEEeCCCCHHHHcCCC
Confidence 7999999889999999998865 3443 3899999874 2467788998752 1122332 34668999999
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHH----HHCCCCCCCcEEEeeh
Q 020875 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK----EFAPSIPAKNITCLTR 158 (320)
Q Consensus 83 DvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~----~~~~~~~~~~i~~~t~ 158 (320)
|+||+++|.+++++++|.+++..|+++++++++.|++++ |+++++++|||+|+||++++ ++ +++|++|++|.|.
T Consensus 71 DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~-~~~ivivvsNP~D~~t~~~~~~~~~~-sg~p~~rvig~~~ 148 (312)
T PRK05086 71 DVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTC-PKACIGIITNPVNTTVAIAAEVLKKA-GVYDKNKLFGVTT 148 (312)
T ss_pred CEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccCchHHHHHHHHHHHHHh-cCCCHHHEEeeec
Confidence 999999999999999999999999999999999999998 89999999999999999987 74 7999999888888
Q ss_pred hhHHHHHHHHHHHcCCCCCCeeeeEEEcCCCC-ccccccccccccCCCCCcchhhhcccchhhhhHHHHHHhhhhHHHHh
Q 020875 159 LDHNRALGQISEKLNVQVSDVKNVIIWGNHSS-SQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIK 237 (320)
Q Consensus 159 ld~~r~~~~~a~~l~v~~~~v~~~~v~G~hg~-~~~~~~S~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~ 237 (320)
||+.|+++.+|++++++|++|+++ ||||||+ +|||+||++ +|.|+.+ ++ ++++.+++++++++|++
T Consensus 149 Lds~R~~~~ia~~l~~~~~~v~~~-v~GeHg~~s~~p~~S~~------~g~~l~~----~~--~~~i~~~v~~~g~~ii~ 215 (312)
T PRK05086 149 LDVIRSETFVAELKGKQPGEVEVP-VIGGHSGVTILPLLSQV------PGVSFTE----QE--VADLTKRIQNAGTEVVE 215 (312)
T ss_pred HHHHHHHHHHHHHhCCChhheEEE-EEEecCCCceecccccc------CCccCCH----HH--HHHHHHHHHHHHHHHHh
Confidence 999999999999999999999987 5899976 999999998 3677732 22 57899999999999999
Q ss_pred cC---CccchHHHHHHHHHHHHHHHhC-CCCCcEEEEEEecCCccCCCCceEEEEEEEEe-CCeEEEecCC-CCChhhhh
Q 020875 238 AR---KLSSALSAASSACDHIRDWVLG-TPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCR-NGEWTIVQGT-DAILYPMS 311 (320)
Q Consensus 238 ~k---g~~~~~~~a~a~~~~i~~~i~~-~~~~~i~~~~v~~~g~yg~~~~v~~s~P~~i~-~G~~~~~~~~-~L~~~E~~ 311 (320)
+| |+| ++++|.++++++.+++.+ .++++++|++ +++|+ |. .++|||+||++| +|+++++ ++ +|+++||+
T Consensus 216 ~k~~~g~t-~~~~a~a~~~~v~ai~~~~~~~~~v~~~~-~~~~~-g~-~~v~~s~P~~ig~~Gv~~i~-~~~~L~~~E~~ 290 (312)
T PRK05086 216 AKAGGGSA-TLSMGQAAARFGLSLVRALQGEQGVVECA-YVEGD-GK-YARFFAQPVLLGKNGVEERL-PIGTLSAFEQN 290 (312)
T ss_pred cccCCCCc-hhhHHHHHHHHHHHHHhcCCCCCcEEEEE-EEecc-CC-cceEEEEEEEEcCCeeEEEc-CCCCCCHHHHH
Confidence 87 544 567789999888877654 3577899976 88887 76 799999999999 9999999 67 99999999
Q ss_pred cccCccc
Q 020875 312 FLSPIAF 318 (320)
Q Consensus 312 ~l~~~~~ 318 (320)
+|+.++.
T Consensus 291 ~l~~s~~ 297 (312)
T PRK05086 291 ALEGMLD 297 (312)
T ss_pred HHHHHHH
Confidence 9998874
No 34
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=100.00 E-value=7.1e-50 Score=361.28 Aligned_cols=252 Identities=32% Similarity=0.466 Sum_probs=225.2
Q ss_pred EEEEcCCChhHHHHHHHHHhcC--cCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCC-CcceEEeCChhhhcCCCcE
Q 020875 8 VLVTGAAGQIGYALVPMIARGV--MLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 8 I~IiGA~G~vG~~la~~L~~~~--~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~-~~~v~~~~~~~~al~~aDv 84 (320)
|+|+||+|.+|+++++.|+..+ .. .+|+|+|+++ +++++..+|++|...+. ..+++.+++.+++++|||+
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~-----~el~L~D~~~--~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDi 73 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLA-----IELVLYDIDE--EKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADV 73 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcc-----eEEEEEeCCc--ccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCE
Confidence 6899977999999999999888 43 3999999975 67899999999987655 4567777777999999999
Q ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCCcEEEeehhhHHHH
Q 020875 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRA 164 (320)
Q Consensus 85 Vi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~i~~~t~ld~~r~ 164 (320)
||+++|.+++++++|.+++.+|+++++++++.+++++ |++++|++|||+|++|++++++ +++|++|++|.|.+|+.|+
T Consensus 74 Vv~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~-p~a~~i~~tNP~d~~t~~~~~~-sg~~~~kviG~~~ld~~r~ 151 (263)
T cd00650 74 VIITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKYS-PDAWIIVVSNPVDIITYLVWRY-SGLPKEKVIGLGTLDPIRF 151 (263)
T ss_pred EEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHH-hCCCchhEEEeecchHHHH
Confidence 9999999999999999999999999999999999999 9999999999999999999997 7999999766655999999
Q ss_pred HHHHHHHcCCCCCCeeeeEEEcCCCCccccccccccccCCCCCcchhhhcccchhhhhHHHHHHhhhhHHHHhcCCccch
Q 020875 165 LGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSSA 244 (320)
Q Consensus 165 ~~~~a~~l~v~~~~v~~~~v~G~hg~~~~~~~S~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~~~~ 244 (320)
++.+|+++++++++|+.+ |||+||++++|+||+++
T Consensus 152 ~~~la~~l~v~~~~v~~~-v~G~hg~~~~~~~s~~~-------------------------------------------- 186 (263)
T cd00650 152 RRILAEKLGVDPDDVKVY-ILGEHGGSQVPDWSTVR-------------------------------------------- 186 (263)
T ss_pred HHHHHHHhCCCccceEEE-EEEcCCCceEeccccch--------------------------------------------
Confidence 999999999999999976 59999999999998743
Q ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEEEEecCCccCCCCceEEEEEEEEe-CCeEEEecCCCCChhhhhcccCccc
Q 020875 245 LSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCR-NGEWTIVQGTDAILYPMSFLSPIAF 318 (320)
Q Consensus 245 ~~~a~a~~~~i~~~i~~~~~~~i~~~~v~~~g~yg~~~~v~~s~P~~i~-~G~~~~~~~~~L~~~E~~~l~~~~~ 318 (320)
+|.++++++.+++. +++.++|++++++|+||+|+|++||+||+++ +|+++++ +++|+++||++|+.++.
T Consensus 187 --~a~~~~~ii~ai~~--~~~~~~~v~v~~~g~ygi~~~~~~s~P~~i~~~Gi~~~~-~~~l~~~e~~~l~~s~~ 256 (263)
T cd00650 187 --IATSIADLIRSLLN--DEGEILPVGVRNNGQIGIPDDVVVSVPCIVGKNGVEEPI-EVGLTDFELEKLQKSAD 256 (263)
T ss_pred --HHHHHHHHHHHHHc--CCCEEEEEEEEeCCccCCcCCEEEEEEEEEeCCceEEEe-cCCCCHHHHHHHHHHHH
Confidence 46777777776554 5789999999999999988999999999999 8999999 59999999999998763
No 35
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=2e-44 Score=312.97 Aligned_cols=285 Identities=27% Similarity=0.339 Sum_probs=235.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCC-CcceEEeCChhhhcCCC
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATTDAVEACTGV 82 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~-~~~v~~~~~~~~al~~a 82 (320)
+..||+|.||+|-||+.|..+|..+...+ ++.|||+.. ..|.+.||+|.+... ...+....+++++++++
T Consensus 27 ~~~KVAvlGAaGGIGQPLSLLlK~np~Vs-----~LaLYDi~~----~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~a 97 (345)
T KOG1494|consen 27 RGLKVAVLGAAGGIGQPLSLLLKLNPLVS-----ELALYDIAN----TPGVAADLSHINTNSSVVGFTGADGLENALKGA 97 (345)
T ss_pred CcceEEEEecCCccCccHHHHHhcCcccc-----eeeeeeccc----CCcccccccccCCCCceeccCChhHHHHHhcCC
Confidence 45799999999999999999998887754 999999963 578899999998643 34455556899999999
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHH---CCCCCCCcEEEeehh
Q 020875 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEF---APSIPAKNITCLTRL 159 (320)
Q Consensus 83 DvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~---~~~~~~~~i~~~t~l 159 (320)
|+||+-||+||+||++|+|++..|+.++++++.++.++| |++.+.++|||++...+++.+. ...|+++|++|.|.|
T Consensus 98 dvVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~c-P~A~i~vIsNPVNstVPIaaevlKk~G~ydpkklfGVTtL 176 (345)
T KOG1494|consen 98 DVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKCC-PNALILVISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTL 176 (345)
T ss_pred CEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhhC-ccceeEeecCcccccchHHHHHHHHcCCCCccceeceehh
Confidence 999999999999999999999999999999999999999 8999999999999876665543 456899999999999
Q ss_pred hHHHHHHHHHHHcCCCC-CCeeeeEEEcCCC-CccccccccccccCCCCCcchhhhcccchhhhhHHHHHHhhhhHHHHh
Q 020875 160 DHNRALGQISEKLNVQV-SDVKNVIIWGNHS-SSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIK 237 (320)
Q Consensus 160 d~~r~~~~~a~~l~v~~-~~v~~~~v~G~hg-~~~~~~~S~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~ 237 (320)
|..|.+.++++.++++| ++++.+ |+|+|. .+.+|++|+.+.. ..+- ++ .++.|..++|.+|.|+.+
T Consensus 177 DvVRA~tFv~~~~~~~p~~~v~VP-VIGGHaG~TIlPLlSQ~~p~--------~~~~-~~--~~~~Lt~RiQ~gGtEVV~ 244 (345)
T KOG1494|consen 177 DVVRANTFVAEVLNLDPAEDVDVP-VIGGHAGITIIPLLSQCKPP--------FRFT-DD--EIEALTHRIQNGGTEVVK 244 (345)
T ss_pred hhhhHHHHHHHHhCCCchhcCCcc-eecCcCCceEeeecccCCCc--------ccCC-HH--HHHHHHHHHHhCCceEEE
Confidence 99999999999999999 557755 689998 7999999998871 1111 11 257899999999999999
Q ss_pred cCC--ccchHHHHHHHHHHHHHHH---hCCCCCcEEEEEEecCCccCCCCceEEEEEEEEe-CCeEEEecCCCCChhhhh
Q 020875 238 ARK--LSSALSAASSACDHIRDWV---LGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCR-NGEWTIVQGTDAILYPMS 311 (320)
Q Consensus 238 ~kg--~~~~~~~a~a~~~~i~~~i---~~~~~~~i~~~~v~~~g~yg~~~~v~~s~P~~i~-~G~~~~~~~~~L~~~E~~ 311 (320)
.|. .+.++|+|+|.++.....+ .+ +++.+.+..|+++. +++ .||+.|+++| +|++++..-.+||++|++
T Consensus 245 AKaGaGSATLSMAyAga~fa~s~lrgl~G-~~~v~ecafV~s~~-~~~---~fFaspv~Lg~~Gv~~v~~l~~lsd~E~~ 319 (345)
T KOG1494|consen 245 AKAGAGSATLSMAYAGAKFADSLLRGLNG-DEDVVECAFVASPV-TEL---PFFATPVTLGKKGVEEVLGLGKLSDYEEK 319 (345)
T ss_pred eccCCCchhhhHHHHHHHHHHHHHHHhCC-CCCeEEEeEEeccc-cCc---cceeceEEecCCceeeecCCCccCHHHHH
Confidence 996 3667899998776654443 44 35556655577664 355 4999999999 999999976779999998
Q ss_pred cccC
Q 020875 312 FLSP 315 (320)
Q Consensus 312 ~l~~ 315 (320)
.|+.
T Consensus 320 ~l~~ 323 (345)
T KOG1494|consen 320 ALEA 323 (345)
T ss_pred HHHH
Confidence 7764
No 36
>PF02866 Ldh_1_C: lactate/malate dehydrogenase, alpha/beta C-terminal domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR022383 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the C-terminal, and is thought to be an is an unusual alpha+beta fold.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process; PDB: 4MDH_B 5MDH_A 1GV0_A 1GUZ_D 2EWD_B 2FRM_D 2FNZ_B 2FN7_B 2FM3_A 1LTH_T ....
Probab=100.00 E-value=4.1e-36 Score=255.12 Aligned_cols=155 Identities=32% Similarity=0.379 Sum_probs=138.6
Q ss_pred ehhhHHHHHHHHHHHcCCCCCCeeeeEEEcCCCCccccccccccccCCCCCcchhhhccc----chhhhhHHHHHHhhhh
Q 020875 157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD----DAWLNGEFITTVQQRG 232 (320)
Q Consensus 157 t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~hg~~~~~~~S~~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~v~~~~ 232 (320)
|.||++|+++++|+++|++|.+++++ ||||||+++||+||++++ +|.|+.++... .+|..+++.+++++++
T Consensus 1 T~LDs~R~~~~la~~l~v~~~~v~~~-ViGeHg~s~~~~~S~~~v----~g~pl~~~~~~~~~~~~~~~~~l~~~v~~~g 75 (174)
T PF02866_consen 1 TMLDSARFRYFLAEKLGVNPSSVNAY-VIGEHGDSQVPDWSHAKV----GGVPLLSYAKPSGKLSEEELEELTERVRKAG 75 (174)
T ss_dssp THHHHHHHHHHHHHHHTSGGGGEEEE-EEBSSSTTEEEEGGGEEE----TTEEHHHHHHTTTSSSHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHCcCccceEEE-EEecCCcceeeeeecccc----cccccccccccccchhHHhhhccccccEecc
Confidence 68999999999999999999999987 589999999999999999 99999776543 3567789999999999
Q ss_pred HHHHhcCCccchHHHHHHHHHHHHHHHhCCCCCcEEEEEEecCCccCCCCc-eEEEEEEEEe-CCeEEEecCCCCChhhh
Q 020875 233 AAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAG-LIYSFPVTCR-NGEWTIVQGTDAILYPM 310 (320)
Q Consensus 233 ~~i~~~kg~~~~~~~a~a~~~~i~~~i~~~~~~~i~~~~v~~~g~yg~~~~-v~~s~P~~i~-~G~~~~~~~~~L~~~E~ 310 (320)
++|++.|++++++++|.|+++++.+++. ++++++|+|++++|+||++.+ +|||+||++| +|++++++.++||++|+
T Consensus 76 ~~ii~~k~g~t~~s~A~a~~~~v~ail~--~~~~i~~~sv~~~g~yg~~~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~ 153 (174)
T PF02866_consen 76 YEIIKAKGGSTSYSIAAAAARIVEAILK--DERRILPVSVYLDGEYGIPDGCVYFSVPVVIGKNGVEKIVEDLPLSEEEQ 153 (174)
T ss_dssp HHHHHHHSSSCHHHHHHHHHHHHHHHHT--THTEEEEEEEEEESGGGEESSSEEEEEEEEEETTEEEEEECSBSSTHHHH
T ss_pred ceeeeeccccCcCCHHHHHHHHHHHHhh--cccccccceeccccccCcccccceecceEEEcCCeeEEEeCCCCCCHHHH
Confidence 9999999556667889999988887666 468999999999999999654 9999999999 99999995599999999
Q ss_pred hcccCccc
Q 020875 311 SFLSPIAF 318 (320)
Q Consensus 311 ~~l~~~~~ 318 (320)
++|+++|.
T Consensus 154 ~~l~~sa~ 161 (174)
T PF02866_consen 154 EKLKESAK 161 (174)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998874
No 37
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=99.97 E-value=2e-31 Score=218.24 Aligned_cols=141 Identities=29% Similarity=0.510 Sum_probs=129.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcEE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDvV 85 (320)
|||+|+||+|.||+++++.|+.+++.+ |++|+|+++ ++++|+++|++|...+...+.....+.+++++|||+|
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~-----ei~L~D~~~--~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDiv 73 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLAD-----EIVLIDINE--DKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIV 73 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSS-----EEEEEESSH--HHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCC-----ceEEeccCc--ccceeeehhhhhhhhhcccccccccccccccccccEE
Confidence 799999988999999999999998864 999999974 6899999999999877766677777889999999999
Q ss_pred EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCCcEEE
Q 020875 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC 155 (320)
Q Consensus 86 i~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~i~~ 155 (320)
|+++|.+++++++|.+++..|+++++++++.+++++ |+++++++|||+|++|++++++ +++|++|++|
T Consensus 74 vitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~-p~~~vivvtNPvd~~t~~~~~~-s~~~~~kviG 141 (141)
T PF00056_consen 74 VITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYA-PDAIVIVVTNPVDVMTYVAQKY-SGFPPNKVIG 141 (141)
T ss_dssp EETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHS-TTSEEEE-SSSHHHHHHHHHHH-HTSSGGGEEE
T ss_pred EEeccccccccccHHHHHHHhHhHHHHHHHHHHHhC-CccEEEEeCCcHHHHHHHHHHh-hCcCcccCcC
Confidence 999999999999999999999999999999999999 8999999999999999999996 8999999765
No 38
>cd05298 GH4_GlvA_pagL_like Glycoside Hydrolases Family 4; GlvA- and pagL-like glycosidases. Bacillus subtilis GlvA and Clostridium acetobutylicum pagL are 6-phospho-alpha-glucosidase, catalyzing the hydrolysis of alpha-glucopyranoside bonds to release glucose from oligosaccharides. The substrate specificities of other members of this subgroup are unknown. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP_PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases, which include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. Members of this subfamily are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductas
Probab=99.93 E-value=1.1e-23 Score=201.36 Aligned_cols=285 Identities=15% Similarity=0.168 Sum_probs=182.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCC--CCCeEEEEEecCCccchhHHHHHHHhccc---CCCCcceEEeCChhhhcC
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGT--DQPVILHMLDIPPAAEALNGVKMELVDAA---FPLLKGVVATTDAVEACT 80 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~--~~~~ev~l~D~~~~~~~~~~~~~dl~~~~---~~~~~~v~~~~~~~~al~ 80 (320)
|||+|||| |+ ...+.|+..-+... -...+|+|+|+++ ++++- ...+.... .....+++.++|..+|++
T Consensus 1 ~KI~iIGa-GS---~~tp~li~~l~~~~~~l~~~ei~L~DId~--~rl~~-v~~l~~~~~~~~g~~~~v~~Ttdr~eAl~ 73 (437)
T cd05298 1 FKIVIAGG-GS---TYTPGIVKSLLDRKEDFPLRELVLYDIDA--ERQEK-VAEAVKILFKENYPEIKFVYTTDPEEAFT 73 (437)
T ss_pred CeEEEECC-cH---HHHHHHHHHHHhCcccCCCCEEEEECCCH--HHHHH-HHHHHHHHHHhhCCCeEEEEECCHHHHhC
Confidence 79999997 43 34444433211000 0135999999985 44433 22222111 112347888999999999
Q ss_pred CCcEEEEeCCCCC------------CCC---CC-----HHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHH
Q 020875 81 GVNIAVMVGGFPR------------KEG---ME-----RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI 140 (320)
Q Consensus 81 ~aDvVi~~ag~~~------------~~~---~~-----r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~ 140 (320)
|||+||.+..+.. +.| ++ -.-...+|++++.++++.|+++| |++++|++|||++++|++
T Consensus 74 gADfVi~~irvGg~~~r~~De~Ip~kyGi~gqET~G~GG~~~alRtip~~~~i~~~i~~~~-pda~lin~tNP~~~vt~~ 152 (437)
T cd05298 74 DADFVFAQIRVGGYAMREQDEKIPLKHGVVGQETCGPGGFAYGLRSIGPMIELIDDIEKYS-PDAWILNYSNPAAIVAEA 152 (437)
T ss_pred CCCEEEEEeeeCCchHHHHHHhHHHHcCcceecCccHHHHHHHHhhHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHH
Confidence 9999999864321 111 11 12256699999999999999999 999999999999999999
Q ss_pred HHHHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeeeEEEcCCCCccccccccccccCCCC-Ccchhhhcc----
Q 020875 141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAG-EKPVRELVK---- 215 (320)
Q Consensus 141 ~~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~hg~~~~~~~S~~~v~~~~~-~~~~~~~~~---- 215 (320)
+++. +|..|++|.|+-.. -++..+|+.||+++++|+.-+ .| -+++.++.+++. . |+.+...+.
T Consensus 153 ~~~~---~~~~kviGlC~~~~-~~~~~la~~lg~~~~~v~~~~-~G---lNH~~w~~~~~~----~~G~D~~p~l~e~~~ 220 (437)
T cd05298 153 LRRL---FPNARILNICDMPI-AIMDSMAAILGLDRKDLEPDY-FG---LNHFGWFTKIYD----KQGEDLLPKLREHVK 220 (437)
T ss_pred HHHH---CCCCCEEEECCcHH-HHHHHHHHHhCCCHHHceEEE-Ee---ecchhhhhheEE----CCCCchHHHHHHHHh
Confidence 9885 67778999998754 578889999999999999764 67 334777777776 3 433221111
Q ss_pred c--------------chhh---------------------------hhHHHHH-----------HhhhhHHHH-------
Q 020875 216 D--------------DAWL---------------------------NGEFITT-----------VQQRGAAII------- 236 (320)
Q Consensus 216 ~--------------~~~~---------------------------~~~~~~~-----------v~~~~~~i~------- 236 (320)
+ ..|. .+++.++ +++...+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~~y~~yy~~~~~~~~~~~~~~~~~~e~~~~~~~~l~~~~~~~~ 300 (437)
T cd05298 221 ENGYLPPDSDEEHRDPSWNDTFANAKDMMADFPDYLPNTYLQYYLYPDYMVEHSNPNYTRANEVMDGREKRVFEECRKII 300 (437)
T ss_pred ccCCCcccccccccccCchHHHHHHhhHHHhCCCcCCCchhhHhCChHHHHHHhccccccHHHHHHHHHHHHHHHHhhhh
Confidence 0 0010 0011010 000111110
Q ss_pred hcCCc--cchHH--HHHHHHHHHHHHHhCCCCCcEEEEEEecCCccC-CCCceEEEEEEEEe-CCeEEEecCCCCChhhh
Q 020875 237 KARKL--SSALS--AASSACDHIRDWVLGTPEGTWVSMGVYSDGSYN-VPAGLIYSFPVTCR-NGEWTIVQGTDAILYPM 310 (320)
Q Consensus 237 ~~kg~--~~~~~--~a~a~~~~i~~~i~~~~~~~i~~~~v~~~g~yg-~~~~v~~s~P~~i~-~G~~~~~~~~~L~~~E~ 310 (320)
..... ..+.+ .+.++++++ ++|.+ |++.+++++++.+|+|+ +|.|+++++||+++ +|+..+- --+|.+...
T Consensus 301 ~~~~~~~~~~~~~~ya~~a~~ii-~aI~~-d~~~~~~vnv~n~G~i~nL~~d~~vevP~~v~~~Gi~pi~-vg~lP~~~~ 377 (437)
T cd05298 301 ETGTAEGSTFHVDVHGEYIVDLA-ASIAY-NTKERFLVIVENNGAIPNLPDDAMVEVPAYIGSNGPEPLV-VGKIPTFYK 377 (437)
T ss_pred hcCChhhhhhhccchHHHHHHHH-HHHHc-CCCeEEEEEeecCCccCCCCCCcEEEEEEEEeCCCceecc-cCCCCHHHH
Confidence 00000 01111 234455444 45665 68899999999999995 78999999999999 8988774 345777655
Q ss_pred hcc
Q 020875 311 SFL 313 (320)
Q Consensus 311 ~~l 313 (320)
..+
T Consensus 378 ~l~ 380 (437)
T cd05298 378 GLM 380 (437)
T ss_pred HHH
Confidence 543
No 39
>cd05197 GH4_glycoside_hydrolases Glycoside Hydrases Family 4. Glycoside hydrolases cleave glycosidic bonds to release smaller sugars from oligo- or polysaccharides. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by GH4 glycoside hydrolases. Other organisms (such as archaea and Thermotoga maritima) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. GH4 family members include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. They require two cofactors, NAD+ and a divalent metal (Mn2+, Ni2+, Mg2+), for activity. Some also require reducing conditions. GH4 glycoside hydrolases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families in
Probab=99.93 E-value=8.8e-24 Score=201.76 Aligned_cols=185 Identities=17% Similarity=0.188 Sum_probs=136.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCC--CCCeEEEEEecCCccchhHH---HHHHHhcccCCCCcceEEeCChhhhcC
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGT--DQPVILHMLDIPPAAEALNG---VKMELVDAAFPLLKGVVATTDAVEACT 80 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~--~~~~ev~l~D~~~~~~~~~~---~~~dl~~~~~~~~~~v~~~~~~~~al~ 80 (320)
|||+|+|| |+ ++.+.|+..-+... -...+|+|+|+++ ++++- .+..+.+.. ....+++.++|..+|++
T Consensus 1 ~KI~iIGg-GS---~~tp~li~~l~~~~~~l~~~ei~L~Did~--~Rl~~v~~l~~~~~~~~-g~~~~v~~ttD~~~Al~ 73 (425)
T cd05197 1 VKIAIIGG-GS---SFTPELVSGLLKTPEELPISEVTLYDIDE--ERLDIILTIAKRYVEEV-GADIKFEKTMDLEDAII 73 (425)
T ss_pred CEEEEECC-ch---HhHHHHHHHHHcChhhCCCCEEEEEcCCH--HHHHHHHHHHHHHHHhh-CCCeEEEEeCCHHHHhC
Confidence 69999997 43 34544443211111 0235999999985 34432 111221111 11246888999999999
Q ss_pred CCcEEEEeCCCCC------------CCC---CC-----HHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHH
Q 020875 81 GVNIAVMVGGFPR------------KEG---ME-----RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI 140 (320)
Q Consensus 81 ~aDvVi~~ag~~~------------~~~---~~-----r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~ 140 (320)
|||+||.+..+.. +.| ++ ......+|+++++++++.|+++| |++|+|++|||+|++|++
T Consensus 74 gADfVi~~irvGg~~~r~~De~Iplk~G~~gqeT~G~GG~~~alrni~ii~~i~~~i~~~~-P~a~lin~TNP~di~t~a 152 (425)
T cd05197 74 DADFVINQFRVGGLTYREKDEQIPLKYGVIGQETVGPGGTFSGLRQIPYVLDIARKXEKLS-PDAWYLNFTNPAGEVTEA 152 (425)
T ss_pred CCCEEEEeeecCChHHHHHHHhHHHHcCcccccccCcchhhhhhhhHHHHHHHHHHHHHhC-CCcEEEecCChHHHHHHH
Confidence 9999999864321 111 10 12245699999999999999999 999999999999999999
Q ss_pred HHHHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeeeEEEc-CCCCccccccccccccCCCCCcchh
Q 020875 141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG-NHSSSQYPDVNHATVNTAAGEKPVR 211 (320)
Q Consensus 141 ~~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G-~hg~~~~~~~S~~~v~~~~~~~~~~ 211 (320)
++++ .|+.|++|.|.. +.|+++.+|+.+|+++++|+..+ +| ||| ++||++++ +|+|+.
T Consensus 153 ~~~~---~p~~rviG~c~~-~~r~~~~ia~~lgv~~~~v~~~v-~GlnHg----~~~s~~~~----~G~~l~ 211 (425)
T cd05197 153 VRRY---VPPEKAVGLCNV-PIGVMEIVAKLLGESEEKVDWQY-AGLNHG----IWLNRVRY----NGGDVT 211 (425)
T ss_pred HHHh---CCCCcEEEECCC-HHHHHHHHHHHhCCCHHHeEEEE-EeccCe----EeeEeEEE----CCeecH
Confidence 9986 366788888877 99999999999999999999885 89 998 99999999 666654
No 40
>PRK15076 alpha-galactosidase; Provisional
Probab=99.91 E-value=7e-23 Score=196.25 Aligned_cols=282 Identities=16% Similarity=0.147 Sum_probs=186.5
Q ss_pred CCEEEEEcCCChhHHHHHH--HHH-hcCcCCCCCCeEEEEEecCCccchhH-HHHHHHhcccCCC--CcceEEeCChhhh
Q 020875 5 PVRVLVTGAAGQIGYALVP--MIA-RGVMLGTDQPVILHMLDIPPAAEALN-GVKMELVDAAFPL--LKGVVATTDAVEA 78 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~--~L~-~~~~~~~~~~~ev~l~D~~~~~~~~~-~~~~dl~~~~~~~--~~~v~~~~~~~~a 78 (320)
++||+|+| +|.+|++.+. .++ ..++.+ .+|+|+|+++ ++++ +... +.+..... ..+++.+++.+++
T Consensus 1 ~~KIaIIG-aGsvg~~~~~~~~i~~~~~l~~----~evvLvDid~--er~~~~~~l-~~~~~~~~~~~~~i~~ttD~~ea 72 (431)
T PRK15076 1 MPKITFIG-AGSTVFTKNLLGDILSVPALRD----AEIALMDIDP--ERLEESEIV-ARKLAESLGASAKITATTDRREA 72 (431)
T ss_pred CcEEEEEC-CCHHHhHHHHHHHHhhCccCCC----CEEEEECCCH--HHHHHHHHH-HHHHHHhcCCCeEEEEECCHHHH
Confidence 37999999 5999988776 555 334322 3899999975 4554 3333 44433222 2467778888999
Q ss_pred cCCCcEEEEeCCCC-CCCC--------------CCHHHH--------HHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcch
Q 020875 79 CTGVNIAVMVGGFP-RKEG--------------MERKDV--------MSKNVSIYKAQASALEQHAAPNCKVLVVANPAN 135 (320)
Q Consensus 79 l~~aDvVi~~ag~~-~~~~--------------~~r~~~--------~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~ 135 (320)
++|||+||++++++ .+++ ++|.+. ..+|+++++++++.|+++| |++|+|++|||+|
T Consensus 73 l~dADfVv~ti~vg~~~~~~~~De~Iplk~G~~~~r~et~G~GG~~~~~r~i~~i~~i~~~i~~~~-p~a~iin~tNP~d 151 (431)
T PRK15076 73 LQGADYVINAIQVGGYEPCTVTDFEIPKKYGLRQTIGDTLGIGGIMRALRTIPVLLDICEDMEEVC-PDALLLNYVNPMA 151 (431)
T ss_pred hCCCCEEeEeeeeCCcchhhhhhhhhHHHcCCeeecccCcCccchhhhhhhHHHHHHHHHHHHHHC-CCeEEEEcCChHH
Confidence 99999999999886 3333 345566 8899999999999999999 9999999999999
Q ss_pred hhHHHHHHHCCCCCCCcEEEee--hhhHHHHHHHHHHHcCCCCCCeeeeEEEcCCCCccccccccccccCCCCCcchhhh
Q 020875 136 TNALILKEFAPSIPAKNITCLT--RLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVREL 213 (320)
Q Consensus 136 ~~~~~~~~~~~~~~~~~i~~~t--~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~hg~~~~~~~S~~~v~~~~~~~~~~~~ 213 (320)
++|++++ ++|+.|++|.| .+|+. +.+|+.+|+++++|+..+ .| -+++.++.++++ .|+.+...
T Consensus 152 ivt~~~~----~~~~~rviG~c~~~~~~~---~~ia~~l~v~~~~v~~~~-~G---lNH~~W~~~~~~----~G~D~~p~ 216 (431)
T PRK15076 152 MNTWAMN----RYPGIKTVGLCHSVQGTA---EQLARDLGVPPEELRYRC-AG---INHMAWYLELER----KGEDLYPE 216 (431)
T ss_pred HHHHHHh----cCCCCCEEEECCCHHHHH---HHHHHHhCCCHHHeEEEE-Ee---ecchhhheeeeE----CCcchHHH
Confidence 9999987 45677876664 66664 779999999999999885 68 334888888777 33322110
Q ss_pred cc--------------------------c-------c--hhh----hhHHHHHH--------------hhhhHHHH-hcC
Q 020875 214 VK--------------------------D-------D--AWL----NGEFITTV--------------QQRGAAII-KAR 239 (320)
Q Consensus 214 ~~--------------------------~-------~--~~~----~~~~~~~v--------------~~~~~~i~-~~k 239 (320)
+. . + .|- +++..+.. .....+.. ...
T Consensus 217 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~y~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (431)
T PRK15076 217 LRAAAAEGQTRCQDKVRYEMLKRFGYFVTESSEHFAEYVPWFIKPGRPDLIERFNIPLDEYPRRCEEQIANWEKEREELA 296 (431)
T ss_pred HHHHHhccCchhcccccHHHHHHhCCCcccchhhhhhhhcccCcCCCHHHHHHhhcccchhhhhHHHHhhhHHHHHHHhh
Confidence 00 0 0 111 11111111 01111111 111
Q ss_pred CccchHH--HHHHHHHHHHHHHhCCCCCcEEEEEEecCCcc-CCCCceEEEEEEEEe-CCeEEEecCCCCChhhhhcc
Q 020875 240 KLSSALS--AASSACDHIRDWVLGTPEGTWVSMGVYSDGSY-NVPAGLIYSFPVTCR-NGEWTIVQGTDAILYPMSFL 313 (320)
Q Consensus 240 g~~~~~~--~a~a~~~~i~~~i~~~~~~~i~~~~v~~~g~y-g~~~~v~~s~P~~i~-~G~~~~~~~~~L~~~E~~~l 313 (320)
+..++.. .+..++.+| ++|.+ +++.++.+.|.-+|.- ++|.|.+.=+||.++ +|+..+- --+|.+..+..+
T Consensus 297 ~~~~~~~~~~~e~a~~ii-~ai~~-~~~~~~~vnv~N~G~I~~Lp~d~vVEvp~~v~~~G~~P~~-~g~lP~~~~~l~ 371 (431)
T PRK15076 297 NAERIEIKRSREYASTII-EAIET-GEPSVIYGNVRNNGLIDNLPQGCCVEVPCLVDRNGIQPTK-VGDLPPQLAALN 371 (431)
T ss_pred CCCccccccchHHHHHHH-HHHhc-CCceEEEEECCCCCcCCCCCCCCEEEEeEEEcCCcceeee-cCCCCHHHHHHH
Confidence 2211100 123344444 45665 6778898888877864 799999999999999 8887654 345766655443
No 41
>cd05296 GH4_P_beta_glucosidase Glycoside Hydrolases Family 4; Phospho-beta-glucosidase. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein
Probab=99.90 E-value=1.9e-21 Score=185.47 Aligned_cols=282 Identities=18% Similarity=0.172 Sum_probs=181.5
Q ss_pred CEEEEEcCCChhHH-HHHHHHHhc-CcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC--CCcceEEeCChhhhcCC
Q 020875 6 VRVLVTGAAGQIGY-ALVPMIARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP--LLKGVVATTDAVEACTG 81 (320)
Q Consensus 6 ~kI~IiGA~G~vG~-~la~~L~~~-~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~--~~~~v~~~~~~~~al~~ 81 (320)
|||+|+|| |++-. .+...|+.. .-+ ...+|+|+|+++ +++++....-....... ....+..+++..+|++|
T Consensus 1 ~KI~iIGa-GS~~tp~li~~l~~~~~~l---~~~ei~L~Did~-~~rl~~v~~~~~~~~~~~~~~~~v~~t~d~~~al~g 75 (419)
T cd05296 1 MKLTIIGG-GSSYTPELIEGLIRRYEEL---PVTELVLVDIDE-EEKLEIVGALAKRMVKKAGLPIKVHLTTDRREALEG 75 (419)
T ss_pred CEEEEECC-chHhHHHHHHHHHhccccC---CCCEEEEecCCh-HHHHHHHHHHHHHHHHhhCCCeEEEEeCCHHHHhCC
Confidence 69999997 54422 222333332 211 124999999983 35554322212221111 12467888999999999
Q ss_pred CcEEEEeCCCCCCCCCCHHH--------------------HHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHH
Q 020875 82 VNIAVMVGGFPRKEGMERKD--------------------VMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALIL 141 (320)
Q Consensus 82 aDvVi~~ag~~~~~~~~r~~--------------------~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~ 141 (320)
||+||+++++...++.++++ ...+|+++++++++.|+++| |++++|++|||++++|+++
T Consensus 76 adfVi~~~~vg~~~~r~~de~i~~~~Gi~gqET~G~GG~~~a~rni~ii~~i~~~i~~~~-Pda~lin~TNP~~ivt~a~ 154 (419)
T cd05296 76 ADFVFTQIRVGGLEARALDERIPLKHGVIGQETTGAGGFAKALRTIPVILDIAEDVEELA-PDAWLINFTNPAGIVTEAV 154 (419)
T ss_pred CCEEEEEEeeCCcchhhhhhhhHHHcCCccccCCCcchHHHhhhhHHHHHHHHHHHHHHC-CCeEEEEecCHHHHHHHHH
Confidence 99999998876655544444 36789999999999999999 8999999999999999999
Q ss_pred HHHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeeeEEEc-CCCCccccccccccccCCCCCcchhh-hcc----
Q 020875 142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG-NHSSSQYPDVNHATVNTAAGEKPVRE-LVK---- 215 (320)
Q Consensus 142 ~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G-~hg~~~~~~~S~~~v~~~~~~~~~~~-~~~---- 215 (320)
++. + +.|++|.|+. +.|+++.+|+.+|+++++|+..+ +| || +.++.+++. .|+.+.. ++.
T Consensus 155 ~k~-~---~~rviGlc~~-~~r~~~~ia~~lg~~~~~v~~~v-~GlNH----~~w~~~~~~----~G~D~~p~l~~~~~~ 220 (419)
T cd05296 155 LRH-T---GDRVIGLCNV-PIGLQRRIAELLGVDPEDVFIDY-AGLNH----LGWLRRVLL----DGEDVLPELLEDLAA 220 (419)
T ss_pred HHh-c---cCCEEeeCCc-HHHHHHHHHHHhCCCHHHceEEE-Eeccc----ceeeeeeeE----CCcccHHHHHHHhhh
Confidence 985 3 5678888877 48999999999999999999885 79 88 666666666 3332221 000
Q ss_pred ------cchh--------------------hhhHHHHH-----------HhhhhHHH---H------------hcCCccc
Q 020875 216 ------DDAW--------------------LNGEFITT-----------VQQRGAAI---I------------KARKLSS 243 (320)
Q Consensus 216 ------~~~~--------------------~~~~~~~~-----------v~~~~~~i---~------------~~kg~~~ 243 (320)
+..| ..++..+. +.....++ . ..++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~g~~p~~Yl~yy~~~~~~~~~~~~~~~~r~e~~~~~~~~l~~~~~~~~~~~~~~~~~~r~g~- 299 (419)
T cd05296 221 LLSFEEGLLFGPELLRALGALPNEYLRYYYQTDEALEEILEAAGTRGEVVKEVEKELFELYKDPNLDEKPKELEKRGGA- 299 (419)
T ss_pred ccccccccchHHHHHHhcCCcccchHHHHCCcHHHHHHhhhhccchHHHHHHHHHHHHHHHhccccccChHhhHhhcCc-
Confidence 0001 00111110 00000111 1 111111
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCcEEEEEEecCCcc-CCCCceEEEEEEEEe-CCeEEEecCCCCChhhhhcc
Q 020875 244 ALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSY-NVPAGLIYSFPVTCR-NGEWTIVQGTDAILYPMSFL 313 (320)
Q Consensus 244 ~~~~a~a~~~~i~~~i~~~~~~~i~~~~v~~~g~y-g~~~~v~~s~P~~i~-~G~~~~~~~~~L~~~E~~~l 313 (320)
++ +..++.+|. +|.+ +++.++-+.|.-+|.- ++|.+.+.=+||.++ +|+..+- --+|.+..+..+
T Consensus 300 ~y--~e~a~~ii~-ai~~-~~~~~~~vNv~N~G~I~~Lp~d~vVEvp~~v~~~G~~P~~-vg~lP~~~~~l~ 366 (419)
T cd05296 300 GY--SEAALALIS-AIYN-DKGDIHVVNVRNNGAIPGLPDDAVVEVPCVVDADGAHPLP-VGPLPPAILGLI 366 (419)
T ss_pred ch--HHHHHHHHH-HHhc-CCCcEEEEECCCCCCCCCCCCCCEEEEeEEEcCCCceecc-CCCCCHHHHHHH
Confidence 11 133344444 4554 5678888888878864 799999999999999 8876553 335766655443
No 42
>cd05297 GH4_alpha_glucosidase_galactosidase Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases. linked to 3D####ucture
Probab=99.86 E-value=1.1e-19 Score=174.33 Aligned_cols=178 Identities=19% Similarity=0.188 Sum_probs=137.9
Q ss_pred CEEEEEcCCChhHHHHHH--HHHhc-CcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC--CCcceEEeCChhhhcC
Q 020875 6 VRVLVTGAAGQIGYALVP--MIARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP--LLKGVVATTDAVEACT 80 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~--~L~~~-~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~--~~~~v~~~~~~~~al~ 80 (320)
+||+|+| +|.+|++++. .++.. ...+ .+|+|+|+++ ++++....++.+.... ...++..+++++++++
T Consensus 1 ~KIaIIG-aGs~G~a~a~~~~i~~~~~~~g----~eV~L~Did~--e~l~~~~~~~~~~~~~~~~~~~I~~ttD~~eal~ 73 (423)
T cd05297 1 IKIAFIG-AGSVVFTKNLVGDLLKTPELSG----STIALMDIDE--ERLETVEILAKKIVEELGAPLKIEATTDRREALD 73 (423)
T ss_pred CeEEEEC-CChHHhHHHHHHHHhcCCCCCC----CEEEEECCCH--HHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHHhc
Confidence 5899999 5999998776 45433 3221 3899999975 5666666666544322 2356777889999999
Q ss_pred CCcEEEEeCCCCCCCCCCH----------------------HHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhH
Q 020875 81 GVNIAVMVGGFPRKEGMER----------------------KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA 138 (320)
Q Consensus 81 ~aDvVi~~ag~~~~~~~~r----------------------~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~ 138 (320)
|||+||.+++....++.++ .....+|++.+.++++.+++++ |+++++++|||++++|
T Consensus 74 ~AD~Vi~ai~~~~~~~~~~de~i~~K~g~~~~~~~t~g~ggi~~~~~s~~~i~~ia~~i~~~~-p~a~~i~~tNPv~i~t 152 (423)
T cd05297 74 GADFVINTIQVGGHEYTETDFEIPEKYGYYQTVGDTSGPGGIFRALRTIPVLLDIARDIEELC-PDAWLLNYANPMAELT 152 (423)
T ss_pred CCCEEEEeeEecCccchhhhhhhHHHcCeeeeccCCCcHHHHHHHHhhHHHHHHHHHHHHHHC-CCCEEEEcCChHHHHH
Confidence 9999999987654433333 2355689999999999999999 7999999999999999
Q ss_pred HHHHHHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeeeEEEc-CCCCccccccccccc
Q 020875 139 LILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG-NHSSSQYPDVNHATV 201 (320)
Q Consensus 139 ~~~~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G-~hg~~~~~~~S~~~v 201 (320)
+++++. ++ .|++|.|+. +.++++.+|+.+++++++|+..+ +| || +.+|.+++.
T Consensus 153 ~~~~k~-~~---~rviG~c~~-~~~~~~~~a~~l~~~~~~v~~~~-~GlNH----~~w~~~~~~ 206 (423)
T cd05297 153 WALNRY-TP---IKTVGLCHG-VQGTAEQLAKLLGEPPEEVDYQV-AGINH----MAWLLKFEY 206 (423)
T ss_pred HHHHHh-CC---CCEEEECCc-HHHHHHHHHHHhCCCHHHeEEEE-Eeecc----HhhhhhheE
Confidence 999986 43 577777755 78999999999999999999885 78 55 777777776
No 43
>COG1486 CelF Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=99.81 E-value=2.8e-18 Score=161.11 Aligned_cols=287 Identities=18% Similarity=0.200 Sum_probs=179.2
Q ss_pred CCCEEEEEcCCChhHHHHH-H-HHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhccc---CCCCcceEEeCChhhh
Q 020875 4 EPVRVLVTGAAGQIGYALV-P-MIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA---FPLLKGVVATTDAVEA 78 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la-~-~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~---~~~~~~v~~~~~~~~a 78 (320)
++.||+|||| |+++.+.. . .|....-+ +..++.|+|+++ ++++ ...++.+.- .....+++.+++..+|
T Consensus 2 ~~~KI~iIGg-GSt~tp~~v~g~l~~~e~l---~~~el~L~Did~--~r~~-~i~~~~~~~v~~~g~~~kv~~ttd~~eA 74 (442)
T COG1486 2 KKFKIVIIGG-GSTYTPKLLLGDLARTEEL---PVRELALYDIDE--ERLK-IIAILAKKLVEEAGAPVKVEATTDRREA 74 (442)
T ss_pred CcceEEEECC-CccccHHHHHHHHhcCccC---CcceEEEEeCCH--HHHH-HHHHHHHHHHHhhCCCeEEEEecCHHHH
Confidence 4579999996 66655432 1 22222212 235999999985 3443 222222211 0112567888999999
Q ss_pred cCCCcEEEEeCCCC------------CCCCCC--------HHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhH
Q 020875 79 CTGVNIAVMVGGFP------------RKEGME--------RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA 138 (320)
Q Consensus 79 l~~aDvVi~~ag~~------------~~~~~~--------r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~ 138 (320)
|+|||+|+.+.-+. .+.|.- ..-...++++.+.+|++.|+++| |++|++++|||+..+|
T Consensus 75 l~gAdfVi~~~rvG~l~~r~~De~IplkyG~~gqET~G~GGi~~glRtIpvildi~~~m~~~~-P~Aw~lNytNP~~~vT 153 (442)
T COG1486 75 LEGADFVITQIRVGGLEAREKDERIPLKHGLYGQETNGPGGIFYGLRTIPVILDIAKDMEKVC-PNAWMLNYTNPAAIVT 153 (442)
T ss_pred hcCCCEEEEEEeeCCcccchhhhccchhhCccccccccccHHHhhcccchHHHHHHHHHHHhC-CCceEEeccChHHHHH
Confidence 99999999985331 122211 11234589999999999999999 9999999999999999
Q ss_pred HHHHHHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCC-CCeeeeEEEcCCCCccccccccccccCCCCCcchhhhc---
Q 020875 139 LILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQV-SDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV--- 214 (320)
Q Consensus 139 ~~~~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~-~~v~~~~v~G~hg~~~~~~~S~~~v~~~~~~~~~~~~~--- 214 (320)
+++.++ +|.-|++|.|+.. .-....+|+.|++++ ++++.- +.| -+++.+|..++. .|.++..-+
T Consensus 154 eAv~r~---~~~~K~VGlCh~~-~g~~~~lAe~L~~~~~~~l~~~-~aG---lNH~~w~~~~~~----~G~d~~p~l~~~ 221 (442)
T COG1486 154 EAVRRL---YPKIKIVGLCHGP-IGIAMELAEVLGLEPREDLRYR-VAG---LNHMVWILRVRD----DGEDLYPELLEA 221 (442)
T ss_pred HHHHHh---CCCCcEEeeCCch-HHHHHHHHHHhCCCchhceeEE-Eee---chhhhhhhHhhh----cCccchHHHHHH
Confidence 999986 4533889999874 466888999999975 999965 478 334777777766 222111000
Q ss_pred ---------------ccchhh-----------------------------hhHH------HHHHhhhhHH----------
Q 020875 215 ---------------KDDAWL-----------------------------NGEF------ITTVQQRGAA---------- 234 (320)
Q Consensus 215 ---------------~~~~~~-----------------------------~~~~------~~~v~~~~~~---------- 234 (320)
.+..|. ..++ .++++++-.+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ra~ev~~re~~~~~~~~~~~~ 301 (442)
T COG1486 222 LEEGGSPSEPENKNIQSPVWIDMFLKYGYPVLPSSYHRYYYYPYDMKEKKPDEIEKFGTRANEVMKREKELFELYKKPEL 301 (442)
T ss_pred HhccccCCccccccccCcchHHHHHHhCcCcccCcchhhheehHhhhhccchhhhhcCCCHHHHHHHHHHHHHHHhhhhh
Confidence 000000 0000 0011111000
Q ss_pred -----HHhcCCccchHHHHHHHHHHHHHHHhCCCCCcEEEEEEecCCc-cCCCCceEEEEEEEEe-CCeEEEecCCCCCh
Q 020875 235 -----IIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPVTCR-NGEWTIVQGTDAIL 307 (320)
Q Consensus 235 -----i~~~kg~~~~~~~a~a~~~~i~~~i~~~~~~~i~~~~v~~~g~-yg~~~~v~~s~P~~i~-~G~~~~~~~~~L~~ 307 (320)
..+.++.+.-.+ +..++.++ ++|.. +++.++.+.|.-+|. -++|.|...=+||.++ +|+.-.. ..+|.+
T Consensus 302 ~~~p~~~~~~~~~~~~~-~e~a~~ii-~Ai~~-~~~~~~~vNv~N~G~I~nlp~D~vVEvpc~Vd~~Gi~P~~-~g~lP~ 377 (442)
T COG1486 302 KEKPEELEKRIGAGKYS-SEYASNII-NAIEN-NKPSRIYVNVRNNGAITNLPDDAVVEVPCLVDRNGIHPLA-VGDLPE 377 (442)
T ss_pred hcCchhhhhcCCccccc-HHHHHHHH-HHHhc-CCceEEEEEcCCCccccCCCCCeEEEeeEEecCCCCcccc-cCCCCH
Confidence 011111110011 23344444 45664 678999999988886 5899999999999999 8998865 688888
Q ss_pred hhhhccc
Q 020875 308 YPMSFLS 314 (320)
Q Consensus 308 ~E~~~l~ 314 (320)
.-.+.++
T Consensus 378 ~~~~l~~ 384 (442)
T COG1486 378 FVKGLMH 384 (442)
T ss_pred HHHHHHH
Confidence 7766443
No 44
>PF02056 Glyco_hydro_4: Family 4 glycosyl hydrolase; InterPro: IPR001088 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 4 GH4 from CAZY comprises enzymes with several known activities; 6-phospho-beta-glucosidase (3.2.1.86 from EC); 6-phospho-alpha-glucosidase (3.2.1.122 from EC); alpha-galactosidase (3.2.1.22 from EC). 6-phospho-alpha-glucosidase requires both NAD(H) and divalent metal (Mn2+, Fe2+, Co2+, or Ni2+) for activity [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1U8X_X 1S6Y_A 3FEF_B 1VJT_A 1UP4_A 1UP6_C 1UP7_E 1OBB_A.
Probab=99.69 E-value=3.5e-16 Score=132.22 Aligned_cols=156 Identities=22% Similarity=0.248 Sum_probs=104.9
Q ss_pred EEEEEcCCChhHHHHH-H-HHHhcCcCCCCCCeEEEEEecCCccchhHHH---HHHHhcccCCCCcceEEeCChhhhcCC
Q 020875 7 RVLVTGAAGQIGYALV-P-MIARGVMLGTDQPVILHMLDIPPAAEALNGV---KMELVDAAFPLLKGVVATTDAVEACTG 81 (320)
Q Consensus 7 kI~IiGA~G~vG~~la-~-~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~---~~dl~~~~~~~~~~v~~~~~~~~al~~ 81 (320)
||+|+|| |++-.+.. . .+.....+ +..+|+|+|+++ ++++.. +..+.+.. ....+++.++|..+|++|
T Consensus 1 KI~iIGa-GS~~~~~~l~~~l~~~~~l---~~~ei~L~Did~--~RL~~~~~~~~~~~~~~-~~~~~v~~ttd~~eAl~g 73 (183)
T PF02056_consen 1 KITIIGA-GSTYFPLLLLGDLLRTEEL---SGSEIVLMDIDE--ERLEIVERLARRMVEEA-GADLKVEATTDRREALEG 73 (183)
T ss_dssp EEEEETT-TSCCHHHHHHHHHHCTTTS---TEEEEEEE-SCH--HHHHHHHHHHHHHHHHC-TTSSEEEEESSHHHHHTT
T ss_pred CEEEECC-chHhhHHHHHHHHhcCccC---CCcEEEEEcCCH--HHHHHHHHHHHHHHHhc-CCCeEEEEeCCHHHHhCC
Confidence 8999996 66655432 2 23332222 235999999985 555422 11222111 123467889999999999
Q ss_pred CcEEEEeCCC------------CCCCCCC----------HHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHH
Q 020875 82 VNIAVMVGGF------------PRKEGME----------RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL 139 (320)
Q Consensus 82 aDvVi~~ag~------------~~~~~~~----------r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~ 139 (320)
||+||++..+ |.+.|.. -.....++++.+.++++.|+++| |++|++++|||+..+|+
T Consensus 74 ADfVi~~irvGg~~~r~~De~Ip~k~Gi~~~~~eT~G~GG~~~alRtipv~~~ia~~i~~~~-PdAw~iNytNP~~~vt~ 152 (183)
T PF02056_consen 74 ADFVINQIRVGGLEAREIDEEIPLKYGIVGTIQETVGPGGFFRALRTIPVMLDIARDIEELC-PDAWLINYTNPMGIVTE 152 (183)
T ss_dssp ESEEEE---TTHHHHHHHHHHTGGCCTTT-BTTSSSTHHHHHHHHHHHHHHHHHHHHHHHHT-TTSEEEE-SSSHHHHHH
T ss_pred CCEEEEEeeecchHHHHHHHHHHHHhCCccccccccCccHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEeccChHHHHHH
Confidence 9999998653 2233211 12355699999999999999999 99999999999999999
Q ss_pred HHHHHCCCCCCCcEEEeehhhHHHHHHHHHHHcCC
Q 020875 140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNV 174 (320)
Q Consensus 140 ~~~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v 174 (320)
++.+. +|..|++|.|+.. .-+...+|+.||+
T Consensus 153 a~~r~---~~~~k~vGlCh~~-~~~~~~la~~L~~ 183 (183)
T PF02056_consen 153 ALSRY---TPKIKVVGLCHGP-QGTRRQLAKLLGM 183 (183)
T ss_dssp HHHHH---STTSEEEEE-SHH-HHHHHHHHHHHT-
T ss_pred HHHHh---CCCCCEEEECCCH-HHHHHHHHHHhCc
Confidence 99986 3445799999885 4667789998874
No 45
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=99.45 E-value=5.8e-13 Score=121.45 Aligned_cols=170 Identities=16% Similarity=0.137 Sum_probs=118.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhhcC
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEACT 80 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~al~ 80 (320)
..++|+||||+||||++++..|+++|+ +|+-.-|++..++-.....+|...... +..++....++.+|++
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY-------~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~ 77 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGY-------TVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID 77 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCC-------EEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh
Confidence 568999999999999999999999998 676555543222222234455432211 2467777778999999
Q ss_pred CCcEEEEeCCCCCCCCC-CHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCC--------
Q 020875 81 GVNIAVMVGGFPRKEGM-ERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAK-------- 151 (320)
Q Consensus 81 ~aDvVi~~ag~~~~~~~-~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~-------- 151 (320)
+||.|||+|........ ...+++..+++++.+++++++++. .++.+++|++...+.+- .+..+++
T Consensus 78 gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~--sVkrvV~TSS~aAv~~~----~~~~~~~~vvdE~~w 151 (327)
T KOG1502|consen 78 GCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTK--SVKRVVYTSSTAAVRYN----GPNIGENSVVDEESW 151 (327)
T ss_pred CCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccC--CcceEEEeccHHHhccC----CcCCCCCcccccccC
Confidence 99999999976432222 245789999999999999999984 68889999876443321 0111111
Q ss_pred ---------c-EEEeehhhHHHHHHHHHHHcCCCCCCeeeeEEEc
Q 020875 152 ---------N-ITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG 186 (320)
Q Consensus 152 ---------~-i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G 186 (320)
+ .|..+..-..+....+|+.-+++...+.-..|+|
T Consensus 152 sd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~G 196 (327)
T KOG1502|consen 152 SDLDFCRCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFG 196 (327)
T ss_pred CcHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceEC
Confidence 1 2556655567888888888888766665555566
No 46
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=99.29 E-value=1.4e-11 Score=110.09 Aligned_cols=167 Identities=17% Similarity=0.110 Sum_probs=119.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcc-cCCCCcceEEeCChhhhcC--CC
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-AFPLLKGVVATTDAVEACT--GV 82 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~-~~~~~~~v~~~~~~~~al~--~a 82 (320)
|+|+||||+|+||||.+..|++.|+ +++++|...+ +...-+... ......++....-+.+.|+ ..
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~-------~vvV~DNL~~-----g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~i 68 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGH-------EVVVLDNLSN-----GHKIALLKLQFKFYEGDLLDRALLTAVFEENKI 68 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCC-------eEEEEecCCC-----CCHHHhhhccCceEEeccccHHHHHHHHHhcCC
Confidence 6899999999999999999999998 8999998542 111111111 1122345554444555554 68
Q ss_pred cEEEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhh----HHHHHHHCCCCCCCcEEEe
Q 020875 83 NIAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTN----ALILKEFAPSIPAKNITCL 156 (320)
Q Consensus 83 DvVi~~ag~~~~--~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~----~~~~~~~~~~~~~~~i~~~ 156 (320)
|.|||.|+.... +-+.+.+++..|+-.+..+++.|++++ ++-+++|+++.+- +--+.+. .-..|.+.||-
T Consensus 69 daViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~g---v~~~vFSStAavYG~p~~~PI~E~-~~~~p~NPYG~ 144 (329)
T COG1087 69 DAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTG---VKKFIFSSTAAVYGEPTTSPISET-SPLAPINPYGR 144 (329)
T ss_pred CEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhC---CCEEEEecchhhcCCCCCcccCCC-CCCCCCCcchh
Confidence 999999986542 224578899999999999999999997 4557777765321 0001111 11224567999
Q ss_pred ehhhHHHHHHHHHHHcCCCCCCeeeeEEEcCC
Q 020875 157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (320)
Q Consensus 157 t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~h 188 (320)
|+|-..++.+-+++..+.+..-+|.+++.|-|
T Consensus 145 sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~ 176 (329)
T COG1087 145 SKLMSEEILRDAAKANPFKVVILRYFNVAGAC 176 (329)
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEecccccCC
Confidence 99999999999999999999999999999877
No 47
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.27 E-value=1.3e-11 Score=116.05 Aligned_cols=173 Identities=14% Similarity=0.075 Sum_probs=112.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHh-cc-cC------CCCcceEEeCCh
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELV-DA-AF------PLLKGVVATTDA 75 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~-~~-~~------~~~~~v~~~~~~ 75 (320)
+++||+||||+||+|++++..|+.+|+ +|+.+|+... . ......++. .. .. ....++.....+
T Consensus 14 ~~~~vlVtGatGfiG~~lv~~L~~~g~-------~V~~~d~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l 84 (348)
T PRK15181 14 APKRWLITGVAGFIGSGLLEELLFLNQ-------TVIGLDNFST-G-YQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDC 84 (348)
T ss_pred cCCEEEEECCccHHHHHHHHHHHHCCC-------EEEEEeCCCC-c-chhhhhhhhhccccccCCceEEEEccCCCHHHH
Confidence 357999999999999999999999886 8999997531 1 000000110 00 00 011233322345
Q ss_pred hhhcCCCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHH----HHHHHCCCCC
Q 020875 76 VEACTGVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSIP 149 (320)
Q Consensus 76 ~~al~~aDvVi~~ag~~~~~--~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~----~~~~~~~~~~ 149 (320)
.+.++++|+|||+|+....+ ..+..+....|+..+.++++.+++.+ .. ++|++|+. .+... ...+. ....
T Consensus 85 ~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~-~~v~~SS~-~vyg~~~~~~~~e~-~~~~ 160 (348)
T PRK15181 85 QKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH-VS-SFTYAASS-STYGDHPDLPKIEE-RIGR 160 (348)
T ss_pred HHHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CC-eEEEeech-HhhCCCCCCCCCCC-CCCC
Confidence 56678999999999864321 23455678899999999999999875 22 56666532 11100 00010 1112
Q ss_pred CCcEEEeehhhHHHHHHHHHHHcCCCCCCeeeeEEEcCCC
Q 020875 150 AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS 189 (320)
Q Consensus 150 ~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~hg 189 (320)
|...|+.+++...++...+++..+++...+|...|+|.+.
T Consensus 161 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~ 200 (348)
T PRK15181 161 PLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQ 200 (348)
T ss_pred CCChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCC
Confidence 3347899998888887778888899999999999999753
No 48
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=99.23 E-value=9.2e-11 Score=113.42 Aligned_cols=170 Identities=13% Similarity=0.052 Sum_probs=109.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCC
Q 020875 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (320)
Q Consensus 3 ~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~a 82 (320)
.++|||+||||+||||++|+..|+.+|+ +|+.+|+... .... ....+.. . +. .++....-...++.++
T Consensus 118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~-------~V~~ldr~~~-~~~~-~~~~~~~-~-~~-~~~~~~Di~~~~~~~~ 185 (436)
T PLN02166 118 RKRLRIVVTGGAGFVGSHLVDKLIGRGD-------EVIVIDNFFT-GRKE-NLVHLFG-N-PR-FELIRHDVVEPILLEV 185 (436)
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHCCC-------EEEEEeCCCC-ccHh-Hhhhhcc-C-Cc-eEEEECccccccccCC
Confidence 4569999999999999999999999887 8999997521 1111 0111110 0 00 0111111123456789
Q ss_pred cEEEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhH----HHHHHHC----CCCCCCc
Q 020875 83 NIAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA----LILKEFA----PSIPAKN 152 (320)
Q Consensus 83 DvVi~~ag~~~~--~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~----~~~~~~~----~~~~~~~ 152 (320)
|+|||+|+.... ...+..+++..|+..+.++++.+++.+ .++|++|+.. +.. ....+.. .-..+..
T Consensus 186 D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g---~r~V~~SS~~-VYg~~~~~p~~E~~~~~~~p~~p~s 261 (436)
T PLN02166 186 DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG---ARFLLTSTSE-VYGDPLEHPQKETYWGNVNPIGERS 261 (436)
T ss_pred CEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhC---CEEEEECcHH-HhCCCCCCCCCccccccCCCCCCCC
Confidence 999999975431 223456788999999999999999875 4677666421 110 0000100 0111234
Q ss_pred EEEeehhhHHHHHHHHHHHcCCCCCCeeeeEEEcCC
Q 020875 153 ITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (320)
Q Consensus 153 i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~h 188 (320)
.|+.++....++...+++..+++..-+|..+|+|.+
T Consensus 262 ~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~ 297 (436)
T PLN02166 262 CYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPR 297 (436)
T ss_pred chHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCC
Confidence 688888888888777888889888888888889964
No 49
>PLN02650 dihydroflavonol-4-reductase
Probab=99.20 E-value=6.3e-11 Score=111.37 Aligned_cols=175 Identities=15% Similarity=0.134 Sum_probs=113.9
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhc-cc----C-CCCcceEEeCC
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD-AA----F-PLLKGVVATTD 74 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~-~~----~-~~~~~v~~~~~ 74 (320)
|.+..++|+||||+||||++++..|+..|+ +|++++++. +.+... .++.. .. . ....++.....
T Consensus 1 ~~~~~k~iLVTGatGfIGs~l~~~L~~~G~-------~V~~~~r~~--~~~~~~-~~~~~~~~~~~~~~~v~~Dl~d~~~ 70 (351)
T PLN02650 1 MGSQKETVCVTGASGFIGSWLVMRLLERGY-------TVRATVRDP--ANVKKV-KHLLDLPGATTRLTLWKADLAVEGS 70 (351)
T ss_pred CCCCCCEEEEeCCcHHHHHHHHHHHHHCCC-------EEEEEEcCc--chhHHH-HHHHhccCCCCceEEEEecCCChhh
Confidence 778889999999999999999999999887 788777653 222211 11111 00 0 01234444445
Q ss_pred hhhhcCCCcEEEEeCCCCCCCCCC-HHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhH-----HHHHHHCCCC
Q 020875 75 AVEACTGVNIAVMVGGFPRKEGME-RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA-----LILKEFAPSI 148 (320)
Q Consensus 75 ~~~al~~aDvVi~~ag~~~~~~~~-r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~-----~~~~~~~~~~ 148 (320)
+.++++++|+|||+|+.......+ ..+.+..|+..+.++++.+.+.+ .-.++|++|+....-. ....+ ..+
T Consensus 71 ~~~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~~r~v~~SS~~~~~~~~~~~~~~~E--~~~ 147 (351)
T PLN02650 71 FDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAK-TVRRIVFTSSAGTVNVEEHQKPVYDE--DCW 147 (351)
T ss_pred HHHHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcC-CceEEEEecchhhcccCCCCCCccCc--ccC
Confidence 667888999999999754321112 24577899999999999998864 2235666664321100 00001 000
Q ss_pred ----------CCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeeeEEEcCC
Q 020875 149 ----------PAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (320)
Q Consensus 149 ----------~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~h 188 (320)
++...|+.+++....+...+++..|++...++...|+|..
T Consensus 148 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~ 197 (351)
T PLN02650 148 SDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPF 197 (351)
T ss_pred CchhhhhccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCC
Confidence 0112578888888888888888899998888888889974
No 50
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.19 E-value=5.1e-11 Score=108.69 Aligned_cols=168 Identities=17% Similarity=0.205 Sum_probs=104.9
Q ss_pred EEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC--CCCcceEEeCChhhhcCCCcEEE
Q 020875 9 LVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF--PLLKGVVATTDAVEACTGVNIAV 86 (320)
Q Consensus 9 ~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~--~~~~~v~~~~~~~~al~~aDvVi 86 (320)
+||||+||+|++++..|+++|.. .+|+.+|+.+...... ++..... ....+++...++.++++++|+||
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~-----~~Vr~~d~~~~~~~~~----~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~ 71 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYI-----YEVRVLDRSPPPKFLK----DLQKSGVKEYIQGDITDPESLEEALEGVDVVF 71 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCc-----eEEEEcccccccccch----hhhcccceeEEEeccccHHHHHHHhcCCceEE
Confidence 48999999999999999999842 2899999865322111 1221111 22356666678899999999999
Q ss_pred EeCCCCCCCC-CCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHH------HHH-HHCCCCCCC--cEEEe
Q 020875 87 MVGGFPRKEG-MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL------ILK-EFAPSIPAK--NITCL 156 (320)
Q Consensus 87 ~~ag~~~~~~-~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~------~~~-~~~~~~~~~--~i~~~ 156 (320)
|+|+.....+ ..+.++...|+.+++++++++++.+ ++.+++|++++++.. +.. .....+|+. ..|+-
T Consensus 72 H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~---VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~ 148 (280)
T PF01073_consen 72 HTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAG---VKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAE 148 (280)
T ss_pred EeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcC---CCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHH
Confidence 9998643333 4567789999999999999999864 566666666554321 000 000112221 24666
Q ss_pred ehhhHHHHHHHHHH---H--cCCCCCCeeeeEEEcCC
Q 020875 157 TRLDHNRALGQISE---K--LNVQVSDVKNVIIWGNH 188 (320)
Q Consensus 157 t~ld~~r~~~~~a~---~--l~v~~~~v~~~~v~G~h 188 (320)
|+...+++...... + -++....+|-..|||+.
T Consensus 149 SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~ 185 (280)
T PF01073_consen 149 SKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPG 185 (280)
T ss_pred HHHHHHHHHHhhcccccccccceeEEEEeccEEeCcc
Confidence 66655555433322 0 12344456666678863
No 51
>PLN02206 UDP-glucuronate decarboxylase
Probab=99.19 E-value=1.7e-10 Score=111.71 Aligned_cols=170 Identities=13% Similarity=0.045 Sum_probs=107.5
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHH-HhcccCCCCcceEEeCChhhhcC
Q 020875 2 AKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKME-LVDAAFPLLKGVVATTDAVEACT 80 (320)
Q Consensus 2 ~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~d-l~~~~~~~~~~v~~~~~~~~al~ 80 (320)
+.+.|||+||||+||||++++..|+++|+ +|+.+|+... . ....... +.+.. .++....-...++.
T Consensus 116 ~~~~~kILVTGatGfIGs~Lv~~Ll~~G~-------~V~~ld~~~~-~-~~~~~~~~~~~~~----~~~i~~D~~~~~l~ 182 (442)
T PLN02206 116 KRKGLRVVVTGGAGFVGSHLVDRLMARGD-------SVIVVDNFFT-G-RKENVMHHFSNPN----FELIRHDVVEPILL 182 (442)
T ss_pred ccCCCEEEEECcccHHHHHHHHHHHHCcC-------EEEEEeCCCc-c-chhhhhhhccCCc----eEEEECCccChhhc
Confidence 34568999999999999999999999987 8888886421 1 1111111 11100 01111111234567
Q ss_pred CCcEEEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhH----HHHHHHC----CCCCC
Q 020875 81 GVNIAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA----LILKEFA----PSIPA 150 (320)
Q Consensus 81 ~aDvVi~~ag~~~~--~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~----~~~~~~~----~~~~~ 150 (320)
++|+|||+|+.... ...+..+.+..|+..+.++++++++.+ .++|++|+.. +.. ....+.. ....+
T Consensus 183 ~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g---~r~V~~SS~~-VYg~~~~~p~~E~~~~~~~P~~~ 258 (442)
T PLN02206 183 EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSE-VYGDPLQHPQVETYWGNVNPIGV 258 (442)
T ss_pred CCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC---CEEEEECChH-HhCCCCCCCCCccccccCCCCCc
Confidence 89999999986431 123456788999999999999998874 4677666532 100 0000100 00111
Q ss_pred CcEEEeehhhHHHHHHHHHHHcCCCCCCeeeeEEEcCC
Q 020875 151 KNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (320)
Q Consensus 151 ~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~h 188 (320)
...|+.++....++...+.+..+++..-++...++|.+
T Consensus 259 ~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~ 296 (442)
T PLN02206 259 RSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPR 296 (442)
T ss_pred cchHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCC
Confidence 23577888888787777788889888888888888965
No 52
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=99.16 E-value=7.6e-11 Score=111.78 Aligned_cols=174 Identities=14% Similarity=0.105 Sum_probs=110.8
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcC
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT 80 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~ 80 (320)
|.+..|||+||||+||||++++..|.+.|+ +|+.+|+..+ ...... .+ .......++.....+.++++
T Consensus 17 ~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~-------~V~~v~r~~~-~~~~~~--~~--~~~~~~~Dl~d~~~~~~~~~ 84 (370)
T PLN02695 17 WPSEKLRICITGAGGFIASHIARRLKAEGH-------YIIASDWKKN-EHMSED--MF--CHEFHLVDLRVMENCLKVTK 84 (370)
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHhCCC-------EEEEEEeccc-cccccc--cc--cceEEECCCCCHHHHHHHHh
Confidence 445678999999999999999999999887 8999997531 111100 00 00001122322223455678
Q ss_pred CCcEEEEeCCCCCCCC---CCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHH--------HHHHHC-CCC
Q 020875 81 GVNIAVMVGGFPRKEG---MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL--------ILKEFA-PSI 148 (320)
Q Consensus 81 ~aDvVi~~ag~~~~~~---~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~--------~~~~~~-~~~ 148 (320)
++|+|||+|+.....+ ......+..|+....++++.+++.+ . .++|++|+.. +-.. -+.+.. ...
T Consensus 85 ~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~-v-k~~V~~SS~~-vYg~~~~~~~~~~~~E~~~~p~ 161 (370)
T PLN02695 85 GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARING-V-KRFFYASSAC-IYPEFKQLETNVSLKESDAWPA 161 (370)
T ss_pred CCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhC-C-CEEEEeCchh-hcCCccccCcCCCcCcccCCCC
Confidence 9999999997532111 1233456789999999999998875 2 2566666532 1000 011100 012
Q ss_pred CCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeeeEEEcCCC
Q 020875 149 PAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS 189 (320)
Q Consensus 149 ~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~hg 189 (320)
.+...++.++....++...+++..+++...+|...|+|.++
T Consensus 162 ~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~ 202 (370)
T PLN02695 162 EPQDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFG 202 (370)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCC
Confidence 23446788888888877778888999999999998999865
No 53
>PLN02427 UDP-apiose/xylose synthase
Probab=99.16 E-value=1.4e-10 Score=110.59 Aligned_cols=171 Identities=9% Similarity=0.057 Sum_probs=107.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhc-CcCCCCCCeEEEEEecCCccchhHHHHHHHh----cccCC-CCcceEEeCChhh
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELV----DAAFP-LLKGVVATTDAVE 77 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~-~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~----~~~~~-~~~~v~~~~~~~~ 77 (320)
++|||+||||+||+|++++..|+++ ++ +|+.+|++. ++.... .... +.... ...++....++.+
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~-------~V~~l~r~~--~~~~~l-~~~~~~~~~~~~~~~~~Dl~d~~~l~~ 82 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPH-------KVLALDVYN--DKIKHL-LEPDTVPWSGRIQFHRINIKHDSRLEG 82 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCC-------EEEEEecCc--hhhhhh-hccccccCCCCeEEEEcCCCChHHHHH
Confidence 5689999999999999999999987 45 788888753 222110 0000 00000 1123333345667
Q ss_pred hcCCCcEEEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHH----HHHHHC------
Q 020875 78 ACTGVNIAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFA------ 145 (320)
Q Consensus 78 al~~aDvVi~~ag~~~~--~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~----~~~~~~------ 145 (320)
+++++|+|||+|+.... ......+.+..|+....++++.+++.+ .++|++|+.. +... .+.+..
T Consensus 83 ~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~---~r~v~~SS~~-vYg~~~~~~~~e~~p~~~~~ 158 (386)
T PLN02427 83 LIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCE-VYGKTIGSFLPKDHPLRQDP 158 (386)
T ss_pred HhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC---CEEEEEeeee-eeCCCcCCCCCccccccccc
Confidence 88899999999986432 112334566789999999999988764 3667666521 1000 000000
Q ss_pred ---------CC--C----CCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeeeEEEcCC
Q 020875 146 ---------PS--I----PAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (320)
Q Consensus 146 ---------~~--~----~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~h 188 (320)
+. + .+...|+.++....++...+++..+++..-+|...|+|.+
T Consensus 159 ~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~ 216 (386)
T PLN02427 159 AFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPR 216 (386)
T ss_pred ccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCC
Confidence 00 0 0112477788877777777788889999999988899965
No 54
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.15 E-value=5.3e-10 Score=104.49 Aligned_cols=174 Identities=11% Similarity=0.107 Sum_probs=109.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcc----cC-CCCcceEEeCChhhh
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA----AF-PLLKGVVATTDAVEA 78 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~----~~-~~~~~v~~~~~~~~a 78 (320)
+++||+||||+||+|++++..|++.|+ +|++++++.. ... ...++... .. ....+++...++.+.
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~g~-------~V~~~~r~~~--~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 77 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQKGY-------AVNTTVRDPE--NQK-KIAHLRALQELGDLKIFGADLTDEESFEAP 77 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHCCC-------EEEEEECCCC--CHH-HHHHHHhcCCCCceEEEEcCCCChHHHHHH
Confidence 457999999999999999999999886 7776666431 111 11111110 00 011234333446677
Q ss_pred cCCCcEEEEeCCCCCCCCCC-HHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhH-------HHHHHH------
Q 020875 79 CTGVNIAVMVGGFPRKEGME-RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA-------LILKEF------ 144 (320)
Q Consensus 79 l~~aDvVi~~ag~~~~~~~~-r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~-------~~~~~~------ 144 (320)
++++|+|||+|+.......+ ..+++..|+..+.++++.+.+.. .-.++|++|+-...-. ..+.+.
T Consensus 78 ~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~-~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~ 156 (338)
T PLN00198 78 IAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAK-SVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVE 156 (338)
T ss_pred HhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeecceeeeccCCCCCCceeccccCCchh
Confidence 88999999999853222222 23467899999999999998863 2235666654221100 000000
Q ss_pred --CCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeeeEEEcCC
Q 020875 145 --APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (320)
Q Consensus 145 --~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~h 188 (320)
....++...|+.++....++...+++..+++...+|...|+|.+
T Consensus 157 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~ 202 (338)
T PLN00198 157 FLTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPS 202 (338)
T ss_pred hhhhcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCC
Confidence 00123344688888888888888888899999889988899975
No 55
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.14 E-value=2.1e-10 Score=111.29 Aligned_cols=178 Identities=13% Similarity=0.167 Sum_probs=109.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccc-h-------h---HHHHHHH---h---cccC-CC
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAE-A-------L---NGVKMEL---V---DAAF-PL 65 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~-~-------~---~~~~~dl---~---~~~~-~~ 65 (320)
+++||+||||+||||++++..|+++|+ +|+++|+..... . + ......+ . .... ..
T Consensus 46 ~~k~VLVTGatGfIGs~Lv~~L~~~G~-------~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v 118 (442)
T PLN02572 46 KKKKVMVIGGDGYCGWATALHLSKRGY-------EVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELY 118 (442)
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEE
Confidence 357999999999999999999999887 899988531100 0 0 0000000 0 0000 11
Q ss_pred CcceEEeCChhhhcC--CCcEEEEeCCCCCCC--CCCH---HHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchh--
Q 020875 66 LKGVVATTDAVEACT--GVNIAVMVGGFPRKE--GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT-- 136 (320)
Q Consensus 66 ~~~v~~~~~~~~al~--~aDvVi~~ag~~~~~--~~~r---~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~-- 136 (320)
..++.....+.++++ ++|+|||+|+....+ ..+. ...+..|+..+.++++.+++++ ...++|.+|...-.
T Consensus 119 ~~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g-v~~~~V~~SS~~vYG~ 197 (442)
T PLN02572 119 VGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA-PDCHLVKLGTMGEYGT 197 (442)
T ss_pred ECCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC-CCccEEEEecceecCC
Confidence 134433334556666 489999998653321 1111 2346789999999999999886 33456655532100
Q ss_pred ----hHH-HHH------HHCC--CCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeeeEEEcCCC
Q 020875 137 ----NAL-ILK------EFAP--SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS 189 (320)
Q Consensus 137 ----~~~-~~~------~~~~--~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~hg 189 (320)
+.. .+. +... ...+...|+.+++....+...+++.+|++...+|...|+|.+.
T Consensus 198 ~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~ 263 (442)
T PLN02572 198 PNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRT 263 (442)
T ss_pred CCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCC
Confidence 000 000 0000 1123347999999888888889999999999999999999764
No 56
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.11 E-value=3.2e-10 Score=102.60 Aligned_cols=166 Identities=20% Similarity=0.212 Sum_probs=101.7
Q ss_pred EEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhc----ccC-----CCCcceEEeCChhhh
Q 020875 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD----AAF-----PLLKGVVATTDAVEA 78 (320)
Q Consensus 8 I~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~----~~~-----~~~~~v~~~~~~~~a 78 (320)
|+||||+|++|+.|+..|++.+.. +|+++|+++ ..+.....++.. ... +...+++....+..+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~------~lil~d~~E--~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~ 72 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPK------KLILFDRDE--NKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRI 72 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-S------EEEEEES-H--HHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHH
T ss_pred CEEEccccHHHHHHHHHHHhcCCC------eEEEeCCCh--hHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHH
Confidence 789999999999999999987652 899999985 445444555521 111 224566666667788
Q ss_pred cC--CCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEc-CcchhhHHHHHHHCCCCCCCcE
Q 020875 79 CT--GVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA-NPANTNALILKEFAPSIPAKNI 153 (320)
Q Consensus 79 l~--~aDvVi~~ag~~~~~--~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~s-nP~~~~~~~~~~~~~~~~~~~i 153 (320)
++ +.|+|||+|+....+ .....+.+..|+-.++++++++.+++ -+ ++|.+| .- + ..|.++
T Consensus 73 ~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~-v~-~~v~ISTDK-----------A--v~Ptnv 137 (293)
T PF02719_consen 73 FEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHG-VE-RFVFISTDK-----------A--VNPTNV 137 (293)
T ss_dssp TT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT--S-EEEEEEECG-----------C--SS--SH
T ss_pred HhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcC-CC-EEEEccccc-----------c--CCCCcH
Confidence 88 999999999875432 13467789999999999999999986 44 455554 21 1 112344
Q ss_pred EEeehhhHHHHHHHHHHHc---CCCCCCeeeeEEEcCCCCccccccc
Q 020875 154 TCLTRLDHNRALGQISEKL---NVQVSDVKNVIIWGNHSSSQYPDVN 197 (320)
Q Consensus 154 ~~~t~ld~~r~~~~~a~~l---~v~~~~v~~~~v~G~hg~~~~~~~S 197 (320)
.|.|+.-..++-...++.. +.....||.-+|+|..| |.+|.|-
T Consensus 138 mGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~G-SVip~F~ 183 (293)
T PF02719_consen 138 MGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRG-SVIPLFK 183 (293)
T ss_dssp HHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTT-SCHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCC-cHHHHHH
Confidence 4556555666666555554 33445567667777554 4677663
No 57
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.10 E-value=7.6e-10 Score=102.44 Aligned_cols=173 Identities=14% Similarity=0.082 Sum_probs=107.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcc-----c-CCCCcceEEeCChhh
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-----A-FPLLKGVVATTDAVE 77 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~-----~-~~~~~~v~~~~~~~~ 77 (320)
+.+||+||||+||||++++..|+.+|+ +|++++++... .. ....+... . .....++.....+.+
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~-------~V~~~~r~~~~--~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~ 72 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGY-------TVKATVRDPND--PK-KTEHLLALDGAKERLHLFKANLLEEGSFDS 72 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCC-------EEEEEEcCCCc--hh-hHHHHHhccCCCCceEEEeccccCcchHHH
Confidence 457999999999999999999999987 78877775321 11 11111110 0 011234444445777
Q ss_pred hcCCCcEEEEeCCCCCCCCCCH-HHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHH---------HHHHCCC
Q 020875 78 ACTGVNIAVMVGGFPRKEGMER-KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI---------LKEFAPS 147 (320)
Q Consensus 78 al~~aDvVi~~ag~~~~~~~~r-~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~---------~~~~~~~ 147 (320)
+++++|+|||+|+......... .+.+..|+..+.++++.+.+.... .++|++|+ .....+. +.+..+.
T Consensus 73 ~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~-~~~v~~SS-~~~~~y~~~~~~~~~~~~E~~~~ 150 (322)
T PLN02662 73 VVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSV-KRVVVTSS-MAAVAYNGKPLTPDVVVDETWFS 150 (322)
T ss_pred HHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCC-CEEEEccC-HHHhcCCCcCCCCCCcCCcccCC
Confidence 8899999999998643222223 367889999999999998876212 24555553 2211110 0000000
Q ss_pred CC-----CCcEEEeehhhHHHHHHHHHHHcCCCCCCeeeeEEEcCC
Q 020875 148 IP-----AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (320)
Q Consensus 148 ~~-----~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~h 188 (320)
.| ....++.++....++...+++..+++...++...++|..
T Consensus 151 ~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~ 196 (322)
T PLN02662 151 DPAFCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPL 196 (322)
T ss_pred ChhHhhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCC
Confidence 01 012466777777777666778889988888888888864
No 58
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.08 E-value=6.7e-10 Score=102.04 Aligned_cols=169 Identities=17% Similarity=0.165 Sum_probs=107.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCC-cE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV-NI 84 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~a-Dv 84 (320)
|+|+||||+||||++++..|+++|+ +|+.+|+.... ..... .+.. ....+++......+.++++ |.
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~---~~~~-~~~~d~~~~~~~~~~~~~~~d~ 67 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAAGH-------DVRGLDRLRDG--LDPLL---SGVE-FVVLDLTDRDLVDELAKGVPDA 67 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhCCC-------eEEEEeCCCcc--ccccc---cccc-eeeecccchHHHHHHHhcCCCE
Confidence 3599999999999999999999987 89999985421 11000 0000 0011122212345566777 99
Q ss_pred EEEeCCCCCCCCCC---HHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhH-H----HHHHH-CCCCCCCcEEE
Q 020875 85 AVMVGGFPRKEGME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA-L----ILKEF-APSIPAKNITC 155 (320)
Q Consensus 85 Vi~~ag~~~~~~~~---r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~-~----~~~~~-~~~~~~~~i~~ 155 (320)
|||+|+........ ..++...|+..++++++++++.+ ..++|. +++....- . .+.+. .+..|. ..++
T Consensus 68 vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~--~~~~v~-~ss~~~~~~~~~~~~~~E~~~~~~p~-~~Yg 143 (314)
T COG0451 68 VIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG--VKRFVF-ASSVSVVYGDPPPLPIDEDLGPPRPL-NPYG 143 (314)
T ss_pred EEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcC--CCeEEE-eCCCceECCCCCCCCcccccCCCCCC-CHHH
Confidence 99999876543332 23588999999999999999843 234444 44432111 0 11110 011111 1478
Q ss_pred eehhhHHHHHHHHHHHcCCCCCCeeeeEEEcCCCCc
Q 020875 156 LTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSS 191 (320)
Q Consensus 156 ~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~hg~~ 191 (320)
.+++...+.....++..+++...+|...|+|.+...
T Consensus 144 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~ 179 (314)
T COG0451 144 VSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKP 179 (314)
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCC
Confidence 898888888888888888999999987789965433
No 59
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.08 E-value=7e-10 Score=103.01 Aligned_cols=177 Identities=14% Similarity=0.070 Sum_probs=112.7
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcc-c----C-CCCcceEEeCC
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-A----F-PLLKGVVATTD 74 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~-~----~-~~~~~v~~~~~ 74 (320)
|.-+.++|+||||+|+||++++..|++.|+ +|++.+++.. ..... ..+... . . ....++....+
T Consensus 1 ~~~~~k~vlVtG~~G~IG~~l~~~L~~~G~-------~V~~~~r~~~--~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~ 70 (325)
T PLN02989 1 MADGGKVVCVTGASGYIASWIVKLLLFRGY-------TINATVRDPK--DRKKT-DHLLALDGAKERLKLFKADLLDEGS 70 (325)
T ss_pred CCCCCCEEEEECCchHHHHHHHHHHHHCCC-------EEEEEEcCCc--chhhH-HHHHhccCCCCceEEEeCCCCCchH
Confidence 666778999999999999999999999987 7877766532 11111 111100 0 0 01234444445
Q ss_pred hhhhcCCCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHH--------HHHHH
Q 020875 75 AVEACTGVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL--------ILKEF 144 (320)
Q Consensus 75 ~~~al~~aDvVi~~ag~~~~~--~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~--------~~~~~ 144 (320)
..++++++|+|||+|+..... .....+.+..|+..+.++++.+.++. ...++|++|+-...... .+.+.
T Consensus 71 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~-~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~ 149 (325)
T PLN02989 71 FELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVS-SVKRVILTSSMAAVLAPETKLGPNDVVDET 149 (325)
T ss_pred HHHHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcC-CceEEEEecchhheecCCccCCCCCccCcC
Confidence 667788999999999864321 12234677899999999999998763 22456666643211100 01110
Q ss_pred CCCCC-----CCcEEEeehhhHHHHHHHHHHHcCCCCCCeeeeEEEcCC
Q 020875 145 APSIP-----AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (320)
Q Consensus 145 ~~~~~-----~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~h 188 (320)
.+..| +...|+.+++...++...+++..+++...+|...++|..
T Consensus 150 ~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~ 198 (325)
T PLN02989 150 FFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPI 198 (325)
T ss_pred CCCchhHhcccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCC
Confidence 00001 123588888888888888888889988888888888954
No 60
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.06 E-value=1.4e-09 Score=102.20 Aligned_cols=173 Identities=12% Similarity=0.059 Sum_probs=106.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcc-cC-CCCcceEEeCChhhhcCC-
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-AF-PLLKGVVATTDAVEACTG- 81 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~-~~-~~~~~v~~~~~~~~al~~- 81 (320)
.++|+||||+||+|++++..|++.|+ +|+.+|++... .......+... .. ....++....++.+.+++
T Consensus 4 ~k~ilItGatG~IG~~l~~~L~~~G~-------~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 74 (349)
T TIGR02622 4 GKKVLVTGHTGFKGSWLSLWLLELGA-------EVYGYSLDPPT--SPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEF 74 (349)
T ss_pred CCEEEEECCCChhHHHHHHHHHHCCC-------EEEEEeCCCcc--chhHHHHHhhcCCceEEEccCCCHHHHHHHHhhc
Confidence 47999999999999999999999887 78888876421 11111111100 00 011233333344455554
Q ss_pred -CcEEEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhH----HHHHHHCCCCCCCcEE
Q 020875 82 -VNIAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA----LILKEFAPSIPAKNIT 154 (320)
Q Consensus 82 -aDvVi~~ag~~~~--~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~----~~~~~~~~~~~~~~i~ 154 (320)
.|+|||+|+.+.. ...+....+..|+....++++.+++.+ ...++|++|+..-.-. .-..+ ....++...|
T Consensus 75 ~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~iv~~SS~~vyg~~~~~~~~~e-~~~~~p~~~Y 152 (349)
T TIGR02622 75 KPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIG-SVKAVVNVTSDKCYRNDEWVWGYRE-TDPLGGHDPY 152 (349)
T ss_pred CCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcC-CCCEEEEEechhhhCCCCCCCCCcc-CCCCCCCCcc
Confidence 5999999985432 122345678899999999999998764 2236777765320000 00011 0112334468
Q ss_pred EeehhhHHHHHHHHHHHc-------CCCCCCeeeeEEEcCC
Q 020875 155 CLTRLDHNRALGQISEKL-------NVQVSDVKNVIIWGNH 188 (320)
Q Consensus 155 ~~t~ld~~r~~~~~a~~l-------~v~~~~v~~~~v~G~h 188 (320)
+.++....++...+++.+ +++...++...|+|..
T Consensus 153 ~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~ 193 (349)
T TIGR02622 153 SSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGG 193 (349)
T ss_pred hhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCC
Confidence 888888878777777765 7777788877888864
No 61
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.06 E-value=1.6e-09 Score=100.46 Aligned_cols=174 Identities=13% Similarity=0.078 Sum_probs=108.9
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhccc------CCCCcceEEeCC
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA------FPLLKGVVATTD 74 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~------~~~~~~v~~~~~ 74 (320)
|+.+.++|+||||+||+|++++..|++.|+ +|++..++.. ... ....+.... .....++.....
T Consensus 1 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~--~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~ 70 (322)
T PLN02986 1 MNGGGKLVCVTGASGYIASWIVKLLLLRGY-------TVKATVRDLT--DRK-KTEHLLALDGAKERLKLFKADLLEESS 70 (322)
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEECCCc--chH-HHHHHHhccCCCCceEEEecCCCCcch
Confidence 666678999999999999999999999887 7776555432 111 111111100 011234444445
Q ss_pred hhhhcCCCcEEEEeCCCCCCC-CCCHHHHHHhhHHHHHHHHHHHhhhcCCCe-EEEEEcCcchhhHHH---------HHH
Q 020875 75 AVEACTGVNIAVMVGGFPRKE-GMERKDVMSKNVSIYKAQASALEQHAAPNC-KVLVVANPANTNALI---------LKE 143 (320)
Q Consensus 75 ~~~al~~aDvVi~~ag~~~~~-~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~-~viv~snP~~~~~~~---------~~~ 143 (320)
+.++++++|+|||+|+..... .....+++..|+..+.++++.+++.. ++ ++|++|+.... .+. +.+
T Consensus 71 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~--~v~rvV~~SS~~~~-~~~~~~~~~~~~~~E 147 (322)
T PLN02986 71 FEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETP--SVKRVILTSSTAAV-LFRQPPIEANDVVDE 147 (322)
T ss_pred HHHHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcC--CccEEEEecchhhe-ecCCccCCCCCCcCc
Confidence 677788999999999863211 12233567889999999999988752 23 45555543211 100 000
Q ss_pred HCCCCC-----CCcEEEeehhhHHHHHHHHHHHcCCCCCCeeeeEEEcC
Q 020875 144 FAPSIP-----AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGN 187 (320)
Q Consensus 144 ~~~~~~-----~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~ 187 (320)
.....| +...|+.++....++...+++..+++...++...|+|.
T Consensus 148 ~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp 196 (322)
T PLN02986 148 TFFSDPSLCRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGP 196 (322)
T ss_pred ccCCChHHhhccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCC
Confidence 000001 12357788887778777788888988888888888885
No 62
>PLN02214 cinnamoyl-CoA reductase
Probab=99.05 E-value=6.2e-10 Score=104.43 Aligned_cols=171 Identities=15% Similarity=0.104 Sum_probs=111.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhccc--C-CCCcceEEeCChhhhcCC
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA--F-PLLKGVVATTDAVEACTG 81 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~al~~ 81 (320)
+++|+||||+||+|++++..|+++|+ +|+.++++.+.. .......+.... . ....++....++.+++++
T Consensus 10 ~~~vlVTGatGfIG~~l~~~L~~~G~-------~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 81 (342)
T PLN02214 10 GKTVCVTGAGGYIASWIVKILLERGY-------TVKGTVRNPDDP-KNTHLRELEGGKERLILCKADLQDYEALKAAIDG 81 (342)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcC-------EEEEEeCCchhh-hHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhc
Confidence 46899999999999999999999987 788888753211 111111121110 0 012344444456778899
Q ss_pred CcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhH-------HHHHHHCC---CCC--
Q 020875 82 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA-------LILKEFAP---SIP-- 149 (320)
Q Consensus 82 aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~-------~~~~~~~~---~~~-- 149 (320)
+|+|||+|+... ....+.+..|+..+.++++.+++.+ . .++|++|+-..+-. ..+.+... ..+
T Consensus 82 ~d~Vih~A~~~~---~~~~~~~~~nv~gt~~ll~aa~~~~-v-~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~ 156 (342)
T PLN02214 82 CDGVFHTASPVT---DDPEQMVEPAVNGAKFVINAAAEAK-V-KRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKN 156 (342)
T ss_pred CCEEEEecCCCC---CCHHHHHHHHHHHHHHHHHHHHhcC-C-CEEEEeccceeeeccCCCCCCcccCcccCCChhhccc
Confidence 999999998542 2456678899999999999999875 2 25666654321110 00111000 001
Q ss_pred CCcEEEeehhhHHHHHHHHHHHcCCCCCCeeeeEEEcCC
Q 020875 150 AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (320)
Q Consensus 150 ~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~h 188 (320)
+...|+.++....++...+++..+++...++...|+|.+
T Consensus 157 p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~ 195 (342)
T PLN02214 157 TKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPP 195 (342)
T ss_pred cccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCC
Confidence 122467777877888888888889999999988899965
No 63
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=99.03 E-value=1.1e-09 Score=111.41 Aligned_cols=169 Identities=14% Similarity=0.118 Sum_probs=110.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhc-CcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC-CCcceEEeCC-hhhhcC
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVATTD-AVEACT 80 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~-~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~-~~~~v~~~~~-~~~al~ 80 (320)
+.|||+||||+||+|++++..|+.. |+ +|+.+|+... .... . +.+.... ...+++.... +.++++
T Consensus 314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~-------~V~~l~r~~~--~~~~-~--~~~~~~~~~~gDl~d~~~~l~~~l~ 381 (660)
T PRK08125 314 RRTRVLILGVNGFIGNHLTERLLRDDNY-------EVYGLDIGSD--AISR-F--LGHPRFHFVEGDISIHSEWIEYHIK 381 (660)
T ss_pred cCCEEEEECCCchHHHHHHHHHHhCCCc-------EEEEEeCCch--hhhh-h--cCCCceEEEeccccCcHHHHHHHhc
Confidence 4589999999999999999999974 66 8999998641 1110 0 0110000 1123322212 345788
Q ss_pred CCcEEEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHH----HHHHHCCC---CC--
Q 020875 81 GVNIAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPS---IP-- 149 (320)
Q Consensus 81 ~aDvVi~~ag~~~~--~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~----~~~~~~~~---~~-- 149 (320)
++|+|||+|+.... ......+.+..|+....++++++++++ .++|++|+.. +... .+.+..+- .|
T Consensus 382 ~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~---~~~V~~SS~~-vyg~~~~~~~~E~~~~~~~~p~~ 457 (660)
T PRK08125 382 KCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN---KRIIFPSTSE-VYGMCTDKYFDEDTSNLIVGPIN 457 (660)
T ss_pred CCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC---CeEEEEcchh-hcCCCCCCCcCccccccccCCCC
Confidence 99999999986432 223456678899999999999999874 3566666531 1100 00110000 01
Q ss_pred -CCcEEEeehhhHHHHHHHHHHHcCCCCCCeeeeEEEcCC
Q 020875 150 -AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (320)
Q Consensus 150 -~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~h 188 (320)
+...|+.++....++...+++..+++...+|..+++|.+
T Consensus 458 ~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~ 497 (660)
T PRK08125 458 KQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPR 497 (660)
T ss_pred CCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCC
Confidence 123689999888888888899999999999999889964
No 64
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=99.03 E-value=7.1e-10 Score=104.05 Aligned_cols=167 Identities=10% Similarity=0.063 Sum_probs=105.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhc-CcCCCCCCeEEEEEecCCccchhHHHHHHHhcc-cCC-CCcceE-EeCChhhhcC
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-AFP-LLKGVV-ATTDAVEACT 80 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~-~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~-~~~-~~~~v~-~~~~~~~al~ 80 (320)
||||+||||+||+|++++..|+.. ++ +|+.+|+.. .+.. ++... ... ...++. ....+.++++
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~-------~V~~~~r~~--~~~~----~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 67 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDW-------EVYGMDMQT--DRLG----DLVNHPRMHFFEGDITINKEWIEYHVK 67 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCC-------eEEEEeCcH--HHHH----HhccCCCeEEEeCCCCCCHHHHHHHHc
Confidence 469999999999999999999875 55 899998752 1111 11110 000 112332 1123445678
Q ss_pred CCcEEEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHH----HHHHHCCCC------
Q 020875 81 GVNIAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSI------ 148 (320)
Q Consensus 81 ~aDvVi~~ag~~~~--~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~----~~~~~~~~~------ 148 (320)
++|+|||+|+.... ...+.......|+..+.++++.+++.. .++|.+|+.. +... .+.+..+.+
T Consensus 68 ~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~---~~~v~~SS~~-vyg~~~~~~~~ee~~~~~~~~~~ 143 (347)
T PRK11908 68 KCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG---KHLVFPSTSE-VYGMCPDEEFDPEASPLVYGPIN 143 (347)
T ss_pred CCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC---CeEEEEecce-eeccCCCcCcCccccccccCcCC
Confidence 99999999876432 223445567889999999999998763 4677666532 1000 000100000
Q ss_pred CCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeeeEEEcCC
Q 020875 149 PAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (320)
Q Consensus 149 ~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~h 188 (320)
++...|+.++.........+++..+++...+|...++|.+
T Consensus 144 ~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~ 183 (347)
T PRK11908 144 KPRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPG 183 (347)
T ss_pred CccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCC
Confidence 1222577778777777777788889999999988889964
No 65
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.01 E-value=2.2e-09 Score=99.90 Aligned_cols=171 Identities=13% Similarity=0.142 Sum_probs=108.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC-CCCcceEEeCChhhhcCCCc
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVEACTGVN 83 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~~~~~~al~~aD 83 (320)
.++|+||||+|++|++++..|+..|.. .+|+++|++.. .......++..... ....++....++.++++++|
T Consensus 4 ~k~vLVTGatG~IG~~l~~~L~~~g~~-----~~V~~~~r~~~--~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD 76 (324)
T TIGR03589 4 NKSILITGGTGSFGKAFISRLLENYNP-----KKIIIYSRDEL--KQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVD 76 (324)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhCCC-----cEEEEEcCChh--HHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCC
Confidence 468999999999999999999987511 17888887532 11111111211000 11234444445667788999
Q ss_pred EEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCCcEEEeehhhH
Q 020875 84 IAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDH 161 (320)
Q Consensus 84 vVi~~ag~~~~~--~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~i~~~t~ld~ 161 (320)
+|||+||....+ ..+..+.+..|+..+.++++.+.+.+ . .++|++|+.. ...+...++.++...
T Consensus 77 ~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~-~-~~iV~~SS~~------------~~~p~~~Y~~sK~~~ 142 (324)
T TIGR03589 77 YVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNG-V-KRVVALSTDK------------AANPINLYGATKLAS 142 (324)
T ss_pred EEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-CEEEEEeCCC------------CCCCCCHHHHHHHHH
Confidence 999999864322 23456788999999999999999864 3 3566666421 112233567777666
Q ss_pred HHHHHHHH---HHcCCCCCCeeeeEEEcCCCCccccccc
Q 020875 162 NRALGQIS---EKLNVQVSDVKNVIIWGNHSSSQYPDVN 197 (320)
Q Consensus 162 ~r~~~~~a---~~l~v~~~~v~~~~v~G~hg~~~~~~~S 197 (320)
.++...++ +..|++...++..+|+|..+ +.+|.|.
T Consensus 143 E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~-~~i~~~~ 180 (324)
T TIGR03589 143 DKLFVAANNISGSKGTRFSVVRYGNVVGSRG-SVVPFFK 180 (324)
T ss_pred HHHHHHHHhhccccCcEEEEEeecceeCCCC-CcHHHHH
Confidence 66654433 35678888888888888643 4455544
No 66
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.01 E-value=1.1e-09 Score=102.68 Aligned_cols=173 Identities=9% Similarity=-0.062 Sum_probs=102.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCcc---chhHHHHHHHhc---c-cCCCCcceEEeCChhhh
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA---EALNGVKMELVD---A-AFPLLKGVVATTDAVEA 78 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~---~~~~~~~~dl~~---~-~~~~~~~v~~~~~~~~a 78 (320)
+||+||||+||+|++++..|+..|+ +|+++|++... +.+.....+... . ......+++....+.++
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~ 73 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGY-------EVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRI 73 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCC-------EEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHH
Confidence 4899999999999999999999887 89999886421 111111000000 0 00011233333345566
Q ss_pred cCC--CcEEEEeCCCCCCCC--CCHHHHHHhhHHHHHHHHHHHhhhcCCC-eEEEEEcCcchhhHH----HHHHHCCCCC
Q 020875 79 CTG--VNIAVMVGGFPRKEG--MERKDVMSKNVSIYKAQASALEQHAAPN-CKVLVVANPANTNAL----ILKEFAPSIP 149 (320)
Q Consensus 79 l~~--aDvVi~~ag~~~~~~--~~r~~~~~~n~~~~~~i~~~i~~~~~~~-~~viv~snP~~~~~~----~~~~~~~~~~ 149 (320)
+++ +|+|||+|+...... ......+..|+..+.++++.+++++-.. .++|++|.. .+-.. ...+. ....
T Consensus 74 ~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~-~vyg~~~~~~~~E~-~~~~ 151 (343)
T TIGR01472 74 IDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTS-ELYGKVQEIPQNET-TPFY 151 (343)
T ss_pred HHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccH-HhhCCCCCCCCCCC-CCCC
Confidence 664 599999998643211 2234456778889999999998865222 356665542 11100 01111 1223
Q ss_pred CCcEEEeehhhHHHHHHHHHHHcCCCCCCeeeeEEEcC
Q 020875 150 AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGN 187 (320)
Q Consensus 150 ~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~ 187 (320)
+...|+.++....++...+++.++++....+.+.++|.
T Consensus 152 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp 189 (343)
T TIGR01472 152 PRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESP 189 (343)
T ss_pred CCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCC
Confidence 44578999998888888888888876544443444454
No 67
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.00 E-value=3.7e-09 Score=99.46 Aligned_cols=176 Identities=14% Similarity=0.092 Sum_probs=107.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhccc-C-CCCcceEEeCChhhhcCC
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-F-PLLKGVVATTDAVEACTG 81 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~-~-~~~~~v~~~~~~~~al~~ 81 (320)
..|||+||||+||||++++..|++.|+ +|++++++. ++......++.... . ....++.......+++++
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 79 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGY-------TVHATLRDP--AKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKG 79 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCh--HHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcC
Confidence 458999999999999999999999886 788877653 22221111221100 0 011233333345667788
Q ss_pred CcEEEEeCCCCCCC----CCCHHH-----HHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhH--------HHHHHH
Q 020875 82 VNIAVMVGGFPRKE----GMERKD-----VMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA--------LILKEF 144 (320)
Q Consensus 82 aDvVi~~ag~~~~~----~~~r~~-----~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~--------~~~~~~ 144 (320)
+|+|||+|+..... ..+..+ .+..|+..+.++++.++++. .-.++|++|+..-... ..+.+.
T Consensus 80 ~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~ 158 (353)
T PLN02896 80 CDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK-TVKRVVFTSSISTLTAKDSNGRWRAVVDET 158 (353)
T ss_pred CCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC-CccEEEEEechhhccccccCCCCCCccCcc
Confidence 99999999864321 112222 33445688999999988763 2235666665221100 000110
Q ss_pred CC--------CCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeeeEEEcCCC
Q 020875 145 AP--------SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS 189 (320)
Q Consensus 145 ~~--------~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~hg 189 (320)
.. ..++...|+.+++...++...+++..+++...+|...|+|.+-
T Consensus 159 ~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~ 211 (353)
T PLN02896 159 CQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFL 211 (353)
T ss_pred cCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCc
Confidence 00 0012226888999888988889999999999999888899653
No 68
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=98.99 E-value=1e-09 Score=100.98 Aligned_cols=157 Identities=15% Similarity=0.141 Sum_probs=96.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcC--CCc
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT--GVN 83 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~--~aD 83 (320)
|||+||||+||+|++++..|+.+| +|+.+|+.. .. ...|+.|.. .+.++++ ++|
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g--------~V~~~~~~~--~~---~~~Dl~d~~-----------~~~~~~~~~~~D 56 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG--------NLIALDVHS--TD---YCGDFSNPE-----------GVAETVRKIRPD 56 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC--------CEEEecccc--cc---ccCCCCCHH-----------HHHHHHHhcCCC
Confidence 589999999999999999998776 366677642 11 123444432 4556666 589
Q ss_pred EEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhh----HHHHHHHCCCCCCCcEEEee
Q 020875 84 IAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTN----ALILKEFAPSIPAKNITCLT 157 (320)
Q Consensus 84 vVi~~ag~~~~~--~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~----~~~~~~~~~~~~~~~i~~~t 157 (320)
+|||+|+..... ...+......|+..+.++++.+++.+ .++|.+|... +. ..-..+ ..-..|...|+.+
T Consensus 57 ~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g---~~~v~~Ss~~-Vy~~~~~~p~~E-~~~~~P~~~Yg~s 131 (299)
T PRK09987 57 VIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVG---AWVVHYSTDY-VFPGTGDIPWQE-TDATAPLNVYGET 131 (299)
T ss_pred EEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC---CeEEEEccce-EECCCCCCCcCC-CCCCCCCCHHHHH
Confidence 999999865321 12344456789999999999999875 4666666421 10 000011 0111233457777
Q ss_pred hhhHHHHHHHHHHHcCCCCCCeeeeEEEcCCCCccccc
Q 020875 158 RLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 195 (320)
Q Consensus 158 ~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~hg~~~~~~ 195 (320)
++...++.... ..+..-+|...|+|..+.+.++.
T Consensus 132 K~~~E~~~~~~----~~~~~ilR~~~vyGp~~~~~~~~ 165 (299)
T PRK09987 132 KLAGEKALQEH----CAKHLIFRTSWVYAGKGNNFAKT 165 (299)
T ss_pred HHHHHHHHHHh----CCCEEEEecceecCCCCCCHHHH
Confidence 77665554332 33445667777888655554443
No 69
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=98.97 E-value=9.3e-09 Score=94.72 Aligned_cols=163 Identities=17% Similarity=0.206 Sum_probs=100.2
Q ss_pred EEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchh-HHHHHHHhcccCCCCcceEEeCC-hhhhc-----C
Q 020875 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEAL-NGVKMELVDAAFPLLKGVVATTD-AVEAC-----T 80 (320)
Q Consensus 8 I~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~-~~~~~dl~~~~~~~~~~v~~~~~-~~~al-----~ 80 (320)
|+||||+||+|++++..|+..|+. .+.++|........ .-...|+.|.. ...+ ..+++ .
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~------~v~~~~~~~~~~~~~~~~~~~~~d~~--------~~~~~~~~~~~~~~~~ 67 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGIT------DILVVDNLKDGTKFVNLVDLDIADYM--------DKEDFLAQIMAGDDFG 67 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCc------eEEEecCCCcchHHHhhhhhhhhhhh--------hHHHHHHHHhcccccC
Confidence 789999999999999999998861 46677764311110 10112322211 0011 12222 3
Q ss_pred CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHH----HHHHHCCCCCCCcEEEe
Q 020875 81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSIPAKNITCL 156 (320)
Q Consensus 81 ~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~----~~~~~~~~~~~~~i~~~ 156 (320)
++|+|||+|+.+.....+....+..|+..+.++++.+++.+ +++|..|+.. +... ...+ .....+...|+.
T Consensus 68 ~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~---~~~i~~SS~~-vyg~~~~~~~~E-~~~~~p~~~Y~~ 142 (308)
T PRK11150 68 DIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE---IPFLYASSAA-TYGGRTDDFIEE-REYEKPLNVYGY 142 (308)
T ss_pred CccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcC---CcEEEEcchH-HhCcCCCCCCcc-CCCCCCCCHHHH
Confidence 69999999986543333445678899999999999998864 4566655431 1100 0011 011122335787
Q ss_pred ehhhHHHHHHHHHHHcCCCCCCeeeeEEEcCCC
Q 020875 157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS 189 (320)
Q Consensus 157 t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~hg 189 (320)
++....++...+++..+++...+|...|+|.+.
T Consensus 143 sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~ 175 (308)
T PRK11150 143 SKFLFDEYVRQILPEANSQICGFRYFNVYGPRE 175 (308)
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCC
Confidence 877777776677777788888889888899653
No 70
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=98.96 E-value=4.4e-09 Score=98.83 Aligned_cols=176 Identities=11% Similarity=0.067 Sum_probs=109.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcc-cCC-CCcceEEeCChhhhcCC-
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-AFP-LLKGVVATTDAVEACTG- 81 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~-~~~-~~~~v~~~~~~~~al~~- 81 (320)
|+||+||||+||||++++..|+.+|+. .++++|+.+........ ..+... ... ...++....++.+++++
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~------~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 73 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSD------AVVVVDKLTYAGNLMSL-APVAQSERFAFEKVDICDRAELARVFTEH 73 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCC------EEEEEecCccccchhhh-hhcccCCceEEEECCCcChHHHHHHHhhc
Confidence 359999999999999999999998861 46677764211111100 011000 000 11233333345566664
Q ss_pred -CcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHhhhc------CCC-eEEEEEcCcchhhHH------HHHHHC
Q 020875 82 -VNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHA------APN-CKVLVVANPANTNAL------ILKEFA 145 (320)
Q Consensus 82 -aDvVi~~ag~~~~~--~~~r~~~~~~n~~~~~~i~~~i~~~~------~~~-~~viv~snP~~~~~~------~~~~~~ 145 (320)
+|+|||+||..... .....+....|+..+.++++.+.++. .+. .++|.+|... +... .+.+.
T Consensus 74 ~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~-vyg~~~~~~~~~~E~- 151 (355)
T PRK10217 74 QPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDE-VYGDLHSTDDFFTET- 151 (355)
T ss_pred CCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchh-hcCCCCCCCCCcCCC-
Confidence 89999999865321 12345678899999999999998741 012 3566666432 1000 01110
Q ss_pred CCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeeeEEEcCCC
Q 020875 146 PSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS 189 (320)
Q Consensus 146 ~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~hg 189 (320)
....+...|+.++....++...+++.++++..-++...|+|.+.
T Consensus 152 ~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~ 195 (355)
T PRK10217 152 TPYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYH 195 (355)
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCC
Confidence 11223346888999888888888999999988899888899653
No 71
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=98.96 E-value=1.1e-09 Score=96.94 Aligned_cols=172 Identities=13% Similarity=0.024 Sum_probs=111.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCC
Q 020875 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (320)
Q Consensus 3 ~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~a 82 (320)
..++||+||||+|||||||+..|+..|+ +|...|..-+ +....+++.......++....-....+.++
T Consensus 25 ~~~lrI~itGgaGFIgSHLvdkLm~egh-------~VIa~Dn~ft-----g~k~n~~~~~~~~~fel~~hdv~~pl~~ev 92 (350)
T KOG1429|consen 25 SQNLRILITGGAGFIGSHLVDKLMTEGH-------EVIALDNYFT-----GRKENLEHWIGHPNFELIRHDVVEPLLKEV 92 (350)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHhcCC-------eEEEEecccc-----cchhhcchhccCcceeEEEeechhHHHHHh
Confidence 3568999999999999999999999987 8999997532 222233333222222333333445678999
Q ss_pred cEEEEeCCCCCCCC--CCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcc---hhh----HHHHHHHCCCCCCCcE
Q 020875 83 NIAVMVGGFPRKEG--MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPA---NTN----ALILKEFAPSIPAKNI 153 (320)
Q Consensus 83 DvVi~~ag~~~~~~--~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~---~~~----~~~~~~~~~~~~~~~i 153 (320)
|.|+|+|.....++ .+..+.+..|.-.+.+....+++.+ ++++.+|... |.. ....|-..-.+.++--
T Consensus 93 D~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~---aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~c 169 (350)
T KOG1429|consen 93 DQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG---ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSC 169 (350)
T ss_pred hhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC---ceEEEeecccccCCcccCCCccccccccCcCCchhh
Confidence 99999987644333 3455566778888888888888875 6788777542 100 0000000001122223
Q ss_pred EEeehhhHHHHHHHHHHHcCCCCCCeeeeEEEcCCC
Q 020875 154 TCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS 189 (320)
Q Consensus 154 ~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~hg 189 (320)
+...+.-+.+|.+.+.+..|+...-.|.++.+|..+
T Consensus 170 ydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm 205 (350)
T KOG1429|consen 170 YDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRM 205 (350)
T ss_pred hhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCcc
Confidence 555566677888899999998877777778788644
No 72
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=98.95 E-value=3.6e-09 Score=99.31 Aligned_cols=174 Identities=11% Similarity=0.074 Sum_probs=107.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhccc-CC-CCcceEEeCChhhhcC--C
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-FP-LLKGVVATTDAVEACT--G 81 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~-~~-~~~~v~~~~~~~~al~--~ 81 (320)
|||+||||+||+|++++..|+..|.. .++.+|+........ ....+.... .. ...++....++.++++ +
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~------~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 73 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQD------SVVNVDKLTYAGNLE-SLADVSDSERYVFEHADICDRAELDRIFAQHQ 73 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCC------eEEEecCCCccchHH-HHHhcccCCceEEEEecCCCHHHHHHHHHhcC
Confidence 58999999999999999999988752 466666532101111 011111100 00 1123333334455665 4
Q ss_pred CcEEEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHhhhc------CCC-eEEEEEcCcchhhHH-------------
Q 020875 82 VNIAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHA------APN-CKVLVVANPANTNAL------------- 139 (320)
Q Consensus 82 aDvVi~~ag~~~~--~~~~r~~~~~~n~~~~~~i~~~i~~~~------~~~-~~viv~snP~~~~~~------------- 139 (320)
+|+|||+|+.... ......+++..|+..+.++++.++++. ... .++|.+|... +...
T Consensus 74 ~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~-vyg~~~~~~~~~~~~~~ 152 (352)
T PRK10084 74 PDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDE-VYGDLPHPDEVENSEEL 152 (352)
T ss_pred CCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchh-hcCCCCccccccccccC
Confidence 8999999986432 122346688999999999999998751 012 2566665432 1110
Q ss_pred -HHHHHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeeeEEEcCC
Q 020875 140 -ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (320)
Q Consensus 140 -~~~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~h 188 (320)
.+.+. ..+.+...|+.++....++...+++.++++...++...|+|.+
T Consensus 153 ~~~~E~-~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~ 201 (352)
T PRK10084 153 PLFTET-TAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPY 201 (352)
T ss_pred CCcccc-CCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCC
Confidence 01110 1123345789999988888888888999988888888888975
No 73
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.93 E-value=9.7e-09 Score=99.24 Aligned_cols=166 Identities=19% Similarity=0.194 Sum_probs=114.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhccc-----CCCCcceEEeCChhhhc
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-----FPLLKGVVATTDAVEAC 79 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~-----~~~~~~v~~~~~~~~al 79 (320)
.++|.||||+|++|+.++..++..+. .+++++|++|. ++.....++.+.. .+...++.....+..++
T Consensus 250 gK~vLVTGagGSiGsel~~qil~~~p------~~i~l~~~~E~--~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~ 321 (588)
T COG1086 250 GKTVLVTGGGGSIGSELCRQILKFNP------KEIILFSRDEY--KLYLIDMELREKFPELKLRFYIGDVRDRDRVERAM 321 (588)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHhcCC------CEEEEecCchH--HHHHHHHHHHhhCCCcceEEEecccccHHHHHHHH
Confidence 46899999999999999999998765 38999999863 3444445555421 12346787777788999
Q ss_pred CC--CcEEEEeCCCCCCCC--CCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEc-----CcchhhHHHHHHHCCCCCC
Q 020875 80 TG--VNIAVMVGGFPRKEG--MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA-----NPANTNALILKEFAPSIPA 150 (320)
Q Consensus 80 ~~--aDvVi~~ag~~~~~~--~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~s-----nP~~~~~~~~~~~~~~~~~ 150 (320)
++ .|+|+|+|.....|- ....+-...|+-+++++++++.+++ -. .++.+| ||.+
T Consensus 322 ~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~-V~-~~V~iSTDKAV~PtN--------------- 384 (588)
T COG1086 322 EGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNG-VK-KFVLISTDKAVNPTN--------------- 384 (588)
T ss_pred hcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhC-CC-EEEEEecCcccCCch---------------
Confidence 99 999999998766554 3467788999999999999999987 33 344444 4443
Q ss_pred CcEEEeehhhHHHHHHHHHHHcC---CCCCCeeeeEEEcCCCCcccccccc
Q 020875 151 KNITCLTRLDHNRALGQISEKLN---VQVSDVKNVIIWGNHSSSQYPDVNH 198 (320)
Q Consensus 151 ~~i~~~t~ld~~r~~~~~a~~l~---v~~~~v~~~~v~G~hg~~~~~~~S~ 198 (320)
+.|.|+.-+..+-...++..+ .....||.=+|+|.. .|.+|+|.+
T Consensus 385 --vmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSr-GSViPlFk~ 432 (588)
T COG1086 385 --VMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSR-GSVIPLFKK 432 (588)
T ss_pred --HhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCC-CCCHHHHHH
Confidence 445554444444444444322 333445655677765 467888843
No 74
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.91 E-value=5.2e-09 Score=106.71 Aligned_cols=177 Identities=14% Similarity=0.112 Sum_probs=107.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcc-cC-CCCcceEEeCChhhhc--
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-AF-PLLKGVVATTDAVEAC-- 79 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~-~~-~~~~~v~~~~~~~~al-- 79 (320)
+++||+||||+||||++++..|++++.- .+|+.+|+....+.+.... ..... .. ....++.........+
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~-----~~V~~~d~~~~~~~~~~l~-~~~~~~~v~~~~~Dl~d~~~~~~~~~~ 78 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYPD-----YKIVVLDKLDYCSNLKNLN-PSKSSPNFKFVKGDIASADLVNYLLIT 78 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCCC-----CEEEEEeCCCccchhhhhh-hcccCCCeEEEECCCCChHHHHHHHhh
Confidence 5789999999999999999999987421 2788888642111111000 00000 00 0011222111222223
Q ss_pred CCCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHH-------HHHHCCCCCC
Q 020875 80 TGVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI-------LKEFAPSIPA 150 (320)
Q Consensus 80 ~~aDvVi~~ag~~~~~--~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~-------~~~~~~~~~~ 150 (320)
.++|+|||+|+..... .....++...|+..+.++++.+++.+ .-.++|.+|+. .+.... ..+ .....+
T Consensus 79 ~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~vkr~I~~SS~-~vyg~~~~~~~~~~~E-~~~~~p 155 (668)
T PLN02260 79 EGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTD-EVYGETDEDADVGNHE-ASQLLP 155 (668)
T ss_pred cCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEcch-HHhCCCccccccCccc-cCCCCC
Confidence 6899999999875421 12345677899999999999999875 22356666642 111000 000 011113
Q ss_pred CcEEEeehhhHHHHHHHHHHHcCCCCCCeeeeEEEcCCC
Q 020875 151 KNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS 189 (320)
Q Consensus 151 ~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~hg 189 (320)
...++.++....++...+++..+++..-+|...|+|.+.
T Consensus 156 ~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~ 194 (668)
T PLN02260 156 TNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ 194 (668)
T ss_pred CCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCC
Confidence 346788888888888778888899888889888899654
No 75
>PLN02583 cinnamoyl-CoA reductase
Probab=98.91 E-value=7.4e-09 Score=95.19 Aligned_cols=175 Identities=13% Similarity=0.051 Sum_probs=106.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhccc--C-CCCcceEEeCChhhhcC
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA--F-PLLKGVVATTDAVEACT 80 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~al~ 80 (320)
+.++|+||||+|++|++++..|+++|+ +|++++++.+.........++.... . ....+++...++.+++.
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~-------~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~ 77 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGY-------TVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK 77 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCC-------EEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc
Confidence 456899999999999999999999997 7888776422122211111221000 0 01123433445678899
Q ss_pred CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHH--------HHHHHCCCC-C--
Q 020875 81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL--------ILKEFAPSI-P-- 149 (320)
Q Consensus 81 ~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~--------~~~~~~~~~-~-- 149 (320)
++|.|++.++.+........+++..|+..+.++++.+.+.... .++|++|+-...... .+-+ ..+ +
T Consensus 78 ~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v-~riV~~SS~~a~~~~~~~~~~~~~~~E--~~~~~~~ 154 (297)
T PLN02583 78 GCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTI-EKVVFTSSLTAVIWRDDNISTQKDVDE--RSWSDQN 154 (297)
T ss_pred CCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCc-cEEEEecchHheecccccCCCCCCCCc--ccCCCHH
Confidence 9999999876543221224567899999999999999876311 356665543211100 0000 000 0
Q ss_pred ----CCcEEEeehhhHHHHHHHHHHHcCCCCCCeeeeEEEcCC
Q 020875 150 ----AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (320)
Q Consensus 150 ----~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~h 188 (320)
+...|+.++....++...+++..+++...++-..|+|..
T Consensus 155 ~~~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~ 197 (297)
T PLN02583 155 FCRKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPS 197 (297)
T ss_pred HHhhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCC
Confidence 001366677777777767777778888888877788854
No 76
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=98.89 E-value=5.2e-08 Score=90.66 Aligned_cols=115 Identities=20% Similarity=0.239 Sum_probs=82.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCC--------------CcceEE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL--------------LKGVVA 71 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~--------------~~~v~~ 71 (320)
|||+|+| +|+||...+-.|++.|| +|+++|+++ ++.+ .|.+...|. .+++..
T Consensus 1 MkI~viG-tGYVGLv~g~~lA~~GH-------eVv~vDid~--~KV~----~ln~g~~PI~EpgLe~ll~~~~~~gRl~f 66 (414)
T COG1004 1 MKITVIG-TGYVGLVTGACLAELGH-------EVVCVDIDE--SKVE----LLNKGISPIYEPGLEELLKENLASGRLRF 66 (414)
T ss_pred CceEEEC-CchHHHHHHHHHHHcCC-------eEEEEeCCH--HHHH----HHhCCCCCCcCccHHHHHHhccccCcEEE
Confidence 7999999 79999999999999998 999999975 3332 233333321 235899
Q ss_pred eCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEE-cCcchhhHHH
Q 020875 72 TTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVV-ANPANTNALI 140 (320)
Q Consensus 72 ~~~~~~al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~-snP~~~~~~~ 140 (320)
+++..++++++|++|++.|.|.++..+ .+...+...++.+.++.+....+|+- |=|++....+
T Consensus 67 Ttd~~~a~~~adv~fIavgTP~~~dg~------aDl~~V~ava~~i~~~~~~~~vvV~KSTVPvGt~~~v 130 (414)
T COG1004 67 TTDYEEAVKDADVVFIAVGTPPDEDGS------ADLSYVEAVAKDIGEILDGKAVVVIKSTVPVGTTEEV 130 (414)
T ss_pred EcCHHHHHhcCCEEEEEcCCCCCCCCC------ccHHHHHHHHHHHHhhcCCCeEEEEcCCCCCCchHHH
Confidence 999999999999999999998865432 23466677777777776222444443 3587665444
No 77
>PLN02778 3,5-epimerase/4-reductase
Probab=98.88 E-value=1.6e-08 Score=93.09 Aligned_cols=140 Identities=13% Similarity=0.050 Sum_probs=86.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDv 84 (320)
.|||+||||+||+|++++..|..+|+ +|++...+. ........++. . .++|+
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~-------~V~~~~~~~--~~~~~v~~~l~------------------~-~~~D~ 60 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGI-------DFHYGSGRL--ENRASLEADID------------------A-VKPTH 60 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCC-------EEEEecCcc--CCHHHHHHHHH------------------h-cCCCE
Confidence 48999999999999999999999887 665443221 11111111111 0 26899
Q ss_pred EEEeCCCCCCCC-----CCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcC-cchh-hH--H-----HHHHHCCCCCC
Q 020875 85 AVMVGGFPRKEG-----MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN-PANT-NA--L-----ILKEFAPSIPA 150 (320)
Q Consensus 85 Vi~~ag~~~~~~-----~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~sn-P~~~-~~--~-----~~~~~~~~~~~ 150 (320)
|||+|+....+. ..+.+.+..|+..+.++++.+++.+ ++++++|. .+-. .. . .+.+..+..++
T Consensus 61 ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g---v~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~ 137 (298)
T PLN02778 61 VFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERG---LVLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFT 137 (298)
T ss_pred EEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC---CCEEEEecceEeCCCCCCCcccCCCCCcCCCCCCC
Confidence 999998753221 2456788999999999999999875 33455542 2200 00 0 01111111223
Q ss_pred CcEEEeehhhHHHHHHHHHHHcCCC
Q 020875 151 KNITCLTRLDHNRALGQISEKLNVQ 175 (320)
Q Consensus 151 ~~i~~~t~ld~~r~~~~~a~~l~v~ 175 (320)
...|+.+++...++...+++.+++.
T Consensus 138 ~s~Yg~sK~~~E~~~~~y~~~~~lr 162 (298)
T PLN02778 138 GSFYSKTKAMVEELLKNYENVCTLR 162 (298)
T ss_pred CCchHHHHHHHHHHHHHhhccEEee
Confidence 3478888888888776666655544
No 78
>PLN02240 UDP-glucose 4-epimerase
Probab=98.87 E-value=6.5e-09 Score=97.48 Aligned_cols=177 Identities=15% Similarity=0.048 Sum_probs=102.2
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchh-HHHHHHHhcc-c---CCCCcceEEeCCh
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEAL-NGVKMELVDA-A---FPLLKGVVATTDA 75 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~-~~~~~dl~~~-~---~~~~~~v~~~~~~ 75 (320)
|....+||+|+||+|++|++++..|+.+|+ +|+++|+....... .....++... . .....++....++
T Consensus 1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l 73 (352)
T PLN02240 1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGY-------KVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEAL 73 (352)
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHH
Confidence 677778999999999999999999999886 78888864211100 0011111100 0 0011233333334
Q ss_pred hhhcC--CCcEEEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHH----HHHHHCCC
Q 020875 76 VEACT--GVNIAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPS 147 (320)
Q Consensus 76 ~~al~--~aDvVi~~ag~~~~--~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~----~~~~~~~~ 147 (320)
.++++ ++|+|||+|+.... ......+.+..|+....++++.+++.+ . .++|.+|+ ..+... .+.+ ...
T Consensus 74 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~~v~~Ss-~~vyg~~~~~~~~E-~~~ 149 (352)
T PLN02240 74 EKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHG-C-KKLVFSSS-ATVYGQPEEVPCTE-EFP 149 (352)
T ss_pred HHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcC-C-CEEEEEcc-HHHhCCCCCCCCCC-CCC
Confidence 44454 68999999986431 112345678999999999999988764 2 25666664 321100 0001 011
Q ss_pred CCCCcEEEeehhhHHHHHHHHHHH-cCCCCCCeeeeEEEcCC
Q 020875 148 IPAKNITCLTRLDHNRALGQISEK-LNVQVSDVKNVIIWGNH 188 (320)
Q Consensus 148 ~~~~~i~~~t~ld~~r~~~~~a~~-l~v~~~~v~~~~v~G~h 188 (320)
..+...++.++....++...+++. .++....+|.+.++|.|
T Consensus 150 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~ 191 (352)
T PLN02240 150 LSATNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAH 191 (352)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCC
Confidence 122234666777666665555543 46655556666566654
No 79
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=98.87 E-value=1.1e-08 Score=94.62 Aligned_cols=168 Identities=17% Similarity=0.126 Sum_probs=103.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC-CCCcceEEeCChhhhcCCCcE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~~~~~~al~~aDv 84 (320)
|||+|+||+|++|++++..|+++|+ +|++++++.. ... ++.+... ....++....++.++++++|+
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~-------~V~~~~r~~~--~~~----~~~~~~~~~~~~D~~~~~~l~~~~~~~d~ 67 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGE-------EVRVLVRPTS--DRR----NLEGLDVEIVEGDLRDPASLRKAVAGCRA 67 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCC-------EEEEEEecCc--ccc----ccccCCceEEEeeCCCHHHHHHHHhCCCE
Confidence 5899999999999999999999886 8999998642 111 1111100 011223222356677889999
Q ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhH----HHHHHHCCCCCCC--cEEEeeh
Q 020875 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA----LILKEFAPSIPAK--NITCLTR 158 (320)
Q Consensus 85 Vi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~----~~~~~~~~~~~~~--~i~~~t~ 158 (320)
|||+++.......+..+....|+..+.++++.+++.+ . .++|++|+....-. ....+..+..+.. ..++.++
T Consensus 68 vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK 145 (328)
T TIGR03466 68 LFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEAG-V-ERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSK 145 (328)
T ss_pred EEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHhC-C-CeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHH
Confidence 9999875432234566778899999999999998764 2 25666664321000 0000000000100 1345566
Q ss_pred hhHHHHHHHHHHHcCCCCCCeeeeEEEcCC
Q 020875 159 LDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (320)
Q Consensus 159 ld~~r~~~~~a~~l~v~~~~v~~~~v~G~h 188 (320)
....++...+++..+++..-++...++|.+
T Consensus 146 ~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~ 175 (328)
T TIGR03466 146 FLAEQAALEMAAEKGLPVVIVNPSTPIGPR 175 (328)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCccCCCC
Confidence 666677666777778888888877777854
No 80
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=98.85 E-value=2.6e-08 Score=91.50 Aligned_cols=174 Identities=14% Similarity=0.070 Sum_probs=106.7
Q ss_pred EEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhccc-C-CCCcceEEeCChhhhcCC--C
Q 020875 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-F-PLLKGVVATTDAVEACTG--V 82 (320)
Q Consensus 7 kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~-~-~~~~~v~~~~~~~~al~~--a 82 (320)
||+||||+|++|++++..|+..+.- .+|+++|+....... ....++.... . ....++....++.+++++ +
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~-----~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 74 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPD-----AEVIVLDKLTYAGNL-ENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQP 74 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCC-----CEEEEecCCCcchhh-hhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCC
Confidence 5899999999999999999887521 178888863211111 1111121110 0 011233333345666776 8
Q ss_pred cEEEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcc--hhhHH--HHHHHCCCCCCCcEEEe
Q 020875 83 NIAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPA--NTNAL--ILKEFAPSIPAKNITCL 156 (320)
Q Consensus 83 DvVi~~ag~~~~--~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~--~~~~~--~~~~~~~~~~~~~i~~~ 156 (320)
|+|||+|+.... .......++..|+..+..+++.+.+.. .+.+++.+|... +.... ...+ .....+...++.
T Consensus 75 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~v~g~~~~~~~~~e-~~~~~~~~~Y~~ 152 (317)
T TIGR01181 75 DAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYW-HEFRFHHISTDEVYGDLEKGDAFTE-TTPLAPSSPYSA 152 (317)
T ss_pred CEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCceEEEeeccceeCCCCCCCCcCC-CCCCCCCCchHH
Confidence 999999986431 112345678899999999999998874 445677666421 00000 0111 111223345788
Q ss_pred ehhhHHHHHHHHHHHcCCCCCCeeeeEEEcCC
Q 020875 157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (320)
Q Consensus 157 t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~h 188 (320)
++....++...+++..+++...++...++|..
T Consensus 153 sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~ 184 (317)
T TIGR01181 153 SKAASDHLVRAYHRTYGLPALITRCSNNYGPY 184 (317)
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEeccccCCC
Confidence 88888888777888889988888888788854
No 81
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=98.85 E-value=1.6e-08 Score=94.56 Aligned_cols=175 Identities=8% Similarity=-0.037 Sum_probs=100.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCcc---chhHHHHHHHhccc--C-CCCcceEEeCChhh
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA---EALNGVKMELVDAA--F-PLLKGVVATTDAVE 77 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~---~~~~~~~~dl~~~~--~-~~~~~v~~~~~~~~ 77 (320)
+.++|+||||+||+|++++..|+.+|+ +|+++++.+.. ..+.....+..... . ....++....++.+
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 77 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGY-------EVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRR 77 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCC-------EEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHH
Confidence 457999999999999999999999987 88888875321 11111100000000 0 01123332233445
Q ss_pred hcCC--CcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHhhhcCCC---eEEEEEcCcchhhHH---HHHHHCCC
Q 020875 78 ACTG--VNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPN---CKVLVVANPANTNAL---ILKEFAPS 147 (320)
Q Consensus 78 al~~--aDvVi~~ag~~~~~--~~~r~~~~~~n~~~~~~i~~~i~~~~~~~---~~viv~snP~~~~~~---~~~~~~~~ 147 (320)
++++ .|+|||+|+..... .......+..|+..+.++++.+.++..+. .++|++|. ..+... ...+ ...
T Consensus 78 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss-~~vyg~~~~~~~E-~~~ 155 (340)
T PLN02653 78 WLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGS-SEMYGSTPPPQSE-TTP 155 (340)
T ss_pred HHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEecc-HHHhCCCCCCCCC-CCC
Confidence 5554 69999999874321 12234456789999999999998876221 24555543 211100 0001 011
Q ss_pred CCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeeeEEEcC
Q 020875 148 IPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGN 187 (320)
Q Consensus 148 ~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~ 187 (320)
..+...|+.++.....+...+++.+++.....+.+.++|.
T Consensus 156 ~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp 195 (340)
T PLN02653 156 FHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESP 195 (340)
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCC
Confidence 2233468889888888877788888865433333333454
No 82
>PLN02686 cinnamoyl-CoA reductase
Probab=98.84 E-value=4.7e-09 Score=99.45 Aligned_cols=172 Identities=15% Similarity=0.149 Sum_probs=106.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcc--------cC-CCCcceEEeCC
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA--------AF-PLLKGVVATTD 74 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~--------~~-~~~~~v~~~~~ 74 (320)
++++|+||||+||+|++++..|++.|+ +|+++.++. +.+... .++... .. ....+++...+
T Consensus 52 ~~k~VLVTGatGfIG~~lv~~L~~~G~-------~V~~~~r~~--~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~ 121 (367)
T PLN02686 52 EARLVCVTGGVSFLGLAIVDRLLRHGY-------SVRIAVDTQ--EDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPES 121 (367)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHH-HHHhhhccccccCCceEEEEcCCCCHHH
Confidence 357999999999999999999999987 777655542 222111 112100 00 01134443345
Q ss_pred hhhhcCCCcEEEEeCCCCCCCCC--CHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHH----------HHH
Q 020875 75 AVEACTGVNIAVMVGGFPRKEGM--ERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----------ILK 142 (320)
Q Consensus 75 ~~~al~~aDvVi~~ag~~~~~~~--~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~----------~~~ 142 (320)
+.++++++|.|||+|+.....+. ....+...|+..+.++++.+++.... -++|++|... ...+ .+.
T Consensus 122 l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v-~r~V~~SS~~-~~vyg~~~~~~~~~~i~ 199 (367)
T PLN02686 122 LHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESV-RKCVFTSSLL-ACVWRQNYPHDLPPVID 199 (367)
T ss_pred HHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCc-cEEEEeccHH-HhcccccCCCCCCcccC
Confidence 66778899999999876432221 12345677999999999999875212 2455555431 1100 000
Q ss_pred HHCC----CCC--CCcEEEeehhhHHHHHHHHHHHcCCCCCCeeeeEEEcCC
Q 020875 143 EFAP----SIP--AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (320)
Q Consensus 143 ~~~~----~~~--~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~h 188 (320)
+ .+ ..+ +...|+.+++...++...+++..|++...++...|+|..
T Consensus 200 E-~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~ 250 (367)
T PLN02686 200 E-ESWSDESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPG 250 (367)
T ss_pred C-CCCCChhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCC
Confidence 0 00 001 112467788888888777888889988888888889964
No 83
>CHL00194 ycf39 Ycf39; Provisional
Probab=98.83 E-value=2e-08 Score=93.18 Aligned_cols=109 Identities=12% Similarity=0.038 Sum_probs=74.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC-CCCcceEEeCChhhhcCCCcE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~~~~~~al~~aDv 84 (320)
|||+||||+||+|++++..|+++|+ +|+.++++. ++.. .+.+... ....++....++.++++++|+
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~-------~V~~l~R~~--~~~~----~l~~~~v~~v~~Dl~d~~~l~~al~g~d~ 67 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGY-------QVRCLVRNL--RKAS----FLKEWGAELVYGDLSLPETLPPSFKGVTA 67 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEEcCh--HHhh----hHhhcCCEEEECCCCCHHHHHHHHCCCCE
Confidence 5899999999999999999999987 898888763 1111 1111111 111234334467888999999
Q ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcC
Q 020875 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN 132 (320)
Q Consensus 85 Vi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~sn 132 (320)
|||+++... .+...+...|.....++++++++.+ -. ++|.+|.
T Consensus 68 Vi~~~~~~~---~~~~~~~~~~~~~~~~l~~aa~~~g-vk-r~I~~Ss 110 (317)
T CHL00194 68 IIDASTSRP---SDLYNAKQIDWDGKLALIEAAKAAK-IK-RFIFFSI 110 (317)
T ss_pred EEECCCCCC---CCccchhhhhHHHHHHHHHHHHHcC-CC-EEEEecc
Confidence 999875322 1223456778899999999999875 32 5666664
No 84
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=98.82 E-value=1.2e-08 Score=95.00 Aligned_cols=178 Identities=17% Similarity=0.194 Sum_probs=112.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC-CCcceEEeCChhhhcCCC
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVATTDAVEACTGV 82 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~-~~~~v~~~~~~~~al~~a 82 (320)
++.+++||||+||+|.|++..|.+++.. .+|+++|..........+..++...... ...++.....+..|+.++
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~-----~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~ 77 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELK-----LEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA 77 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccc-----cEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc
Confidence 5679999999999999999999998742 3999999865322222222221011111 124555556788999999
Q ss_pred cEEEEeCCCCC-CCCC-CHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhh---HHHH-HHHCCCCCCC--cEE
Q 020875 83 NIAVMVGGFPR-KEGM-ERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTN---ALIL-KEFAPSIPAK--NIT 154 (320)
Q Consensus 83 DvVi~~ag~~~-~~~~-~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~---~~~~-~~~~~~~~~~--~i~ 154 (320)
.|+|+|..+. .... .++.....|++.++++.+++.+.+ +..++.|+...+. .... ......+|.. ..+
T Consensus 78 -~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~---v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y 153 (361)
T KOG1430|consen 78 -VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELG---VKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPY 153 (361)
T ss_pred -eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhC---CCEEEEecCceEEeCCeecccCCCCCCCcccccccc
Confidence 7777654432 2223 477778999999999999999986 4455555444332 1111 1111234422 268
Q ss_pred EeehhhHHHHHHHHHHHcCCCCCCeeeeEEEcCCCCc
Q 020875 155 CLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSS 191 (320)
Q Consensus 155 ~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~hg~~ 191 (320)
+.|+.+.+++....+..-+....-+|...|+|+ |+.
T Consensus 154 ~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGp-gd~ 189 (361)
T KOG1430|consen 154 GESKALAEKLVLEANGSDDLYTCALRPPGIYGP-GDK 189 (361)
T ss_pred chHHHHHHHHHHHhcCCCCeeEEEEccccccCC-CCc
Confidence 888887777766555444466777888888886 443
No 85
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=98.80 E-value=4.1e-08 Score=91.50 Aligned_cols=172 Identities=15% Similarity=0.080 Sum_probs=99.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccch-hHHHHHHHhcccCC-CCcceEEeCChhhhcC--C
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEA-LNGVKMELVDAAFP-LLKGVVATTDAVEACT--G 81 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~-~~~~~~dl~~~~~~-~~~~v~~~~~~~~al~--~ 81 (320)
|||+||||+|++|++++..|++.|+ +|+++++...... ......++.+.... ...++.......++++ +
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 73 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGH-------DVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHA 73 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCC-------eEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCC
Confidence 6899999999999999999999887 7888886421111 00001111111100 1122222223344454 6
Q ss_pred CcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHH----HHHHHCCCC-CCCcEE
Q 020875 82 VNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSI-PAKNIT 154 (320)
Q Consensus 82 aDvVi~~ag~~~~~--~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~----~~~~~~~~~-~~~~i~ 154 (320)
+|+|||+|+..... .....+.+..|+..+.++++.+++.+ . .++|.+|+ ..+... .+.+. ... .+...+
T Consensus 74 ~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~~v~~Ss-~~~yg~~~~~~~~E~-~~~~~p~~~Y 149 (338)
T PRK10675 74 IDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-V-KNLIFSSS-ATVYGDQPKIPYVES-FPTGTPQSPY 149 (338)
T ss_pred CCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcC-C-CEEEEecc-HHhhCCCCCCccccc-cCCCCCCChh
Confidence 89999999864321 12345678899999999999998874 2 35665554 221100 00010 000 122346
Q ss_pred EeehhhHHHHHHHHHHH-cCCCCCCeeeeEEEcCC
Q 020875 155 CLTRLDHNRALGQISEK-LNVQVSDVKNVIIWGNH 188 (320)
Q Consensus 155 ~~t~ld~~r~~~~~a~~-l~v~~~~v~~~~v~G~h 188 (320)
+.++....++...+++. .+++..-+|...++|.|
T Consensus 150 ~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~ 184 (338)
T PRK10675 150 GKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAH 184 (338)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCC
Confidence 77777777776666654 36666667766677866
No 86
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=98.74 E-value=2.2e-08 Score=88.06 Aligned_cols=166 Identities=14% Similarity=0.210 Sum_probs=103.8
Q ss_pred EEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCC--cEE
Q 020875 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV--NIA 85 (320)
Q Consensus 8 I~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~a--DvV 85 (320)
|+|+||+||+|++++..|+.+|+ +++.+.+....+.......++... ..++.....+.+.+++. |+|
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~-------~v~~~~~~~~~~~~~~~~~~~~~~----~~dl~~~~~~~~~~~~~~~d~v 69 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGH-------EVIVLSRSSNSESFEEKKLNVEFV----IGDLTDKEQLEKLLEKANIDVV 69 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTT-------EEEEEESCSTGGHHHHHHTTEEEE----ESETTSHHHHHHHHHHHTESEE
T ss_pred EEEEccCCHHHHHHHHHHHHcCC-------ccccccccccccccccccceEEEE----EeeccccccccccccccCceEE
Confidence 78999999999999999999997 655555543222111000000000 01111112455666666 999
Q ss_pred EEeCCCCC--CCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHH----HHHHCCCCCCCcEEEeehh
Q 020875 86 VMVGGFPR--KEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI----LKEFAPSIPAKNITCLTRL 159 (320)
Q Consensus 86 i~~ag~~~--~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~----~~~~~~~~~~~~i~~~t~l 159 (320)
|++|+... ....+..++...|+...+++++.+++.+ . .++|++|+ ..+-... +.+ .....+...++.++.
T Consensus 70 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~-~~~i~~sS-~~~y~~~~~~~~~e-~~~~~~~~~Y~~~K~ 145 (236)
T PF01370_consen 70 IHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAG-V-KRFIFLSS-ASVYGDPDGEPIDE-DSPINPLSPYGASKR 145 (236)
T ss_dssp EEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-T-SEEEEEEE-GGGGTSSSSSSBET-TSGCCHSSHHHHHHH
T ss_pred EEeecccccccccccccccccccccccccccccccccc-c-cccccccc-cccccccccccccc-ccccccccccccccc
Confidence 99998652 1113456788899999999999999986 3 46676665 3211000 000 000111123667777
Q ss_pred hHHHHHHHHHHHcCCCCCCeeeeEEEcCC
Q 020875 160 DHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (320)
Q Consensus 160 d~~r~~~~~a~~l~v~~~~v~~~~v~G~h 188 (320)
...++...++++.+++...+|...|+|.+
T Consensus 146 ~~e~~~~~~~~~~~~~~~~~R~~~vyG~~ 174 (236)
T PF01370_consen 146 AAEELLRDYAKKYGLRVTILRPPNVYGPG 174 (236)
T ss_dssp HHHHHHHHHHHHHTSEEEEEEESEEESTT
T ss_pred ccccccccccccccccccccccccccccc
Confidence 77788788888889999999999999976
No 87
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=98.71 E-value=1.4e-07 Score=80.72 Aligned_cols=113 Identities=21% Similarity=0.308 Sum_probs=69.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCC--------------CcceEE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL--------------LKGVVA 71 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~--------------~~~v~~ 71 (320)
|||+|+| .|+||..+|..|++.|+ +|+.+|+++ ++.+ .+.....+. ..+++.
T Consensus 1 M~I~ViG-lGyvGl~~A~~lA~~G~-------~V~g~D~~~--~~v~----~l~~g~~p~~E~~l~~ll~~~~~~~~l~~ 66 (185)
T PF03721_consen 1 MKIAVIG-LGYVGLPLAAALAEKGH-------QVIGVDIDE--EKVE----ALNNGELPIYEPGLDELLKENVSAGRLRA 66 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTS-------EEEEE-S-H--HHHH----HHHTTSSSS-CTTHHHHHHHHHHTTSEEE
T ss_pred CEEEEEC-CCcchHHHHHHHHhCCC-------EEEEEeCCh--HHHH----HHhhccccccccchhhhhccccccccchh
Confidence 7999999 79999999999999998 899999974 3332 233332221 257889
Q ss_pred eCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEc-CcchhhH
Q 020875 72 TTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA-NPANTNA 138 (320)
Q Consensus 72 ~~~~~~al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~s-nP~~~~~ 138 (320)
+++..++++++|++|++.+.|...+.+ .+...+...++.+.++..++..+|+=| =|.+..-
T Consensus 67 t~~~~~ai~~adv~~I~VpTP~~~~~~------~Dls~v~~a~~~i~~~l~~~~lvV~~STvppGtt~ 128 (185)
T PF03721_consen 67 TTDIEEAIKDADVVFICVPTPSDEDGS------PDLSYVESAIESIAPVLRPGDLVVIESTVPPGTTE 128 (185)
T ss_dssp ESEHHHHHHH-SEEEE----EBETTTS------BETHHHHHHHHHHHHHHCSCEEEEESSSSSTTHHH
T ss_pred hhhhhhhhhccceEEEecCCCccccCC------ccHHHHHHHHHHHHHHHhhcceEEEccEEEEeeeh
Confidence 999999999999999999988755332 123344555666666553444444444 3665543
No 88
>PRK06194 hypothetical protein; Provisional
Probab=98.68 E-value=2.2e-07 Score=84.56 Aligned_cols=162 Identities=17% Similarity=0.125 Sum_probs=97.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhhcC
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEACT 80 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~al~ 80 (320)
++++++||||+|++|++++..|+++|. +|+++|++. +.+.....++...... ...++....+..++++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~ 75 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGM-------KLVLADVQQ--DALDRAVAELRAQGAEVLGVRTDVSDAAQVEALAD 75 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-------EEEEEeCCh--HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence 346899999999999999999999887 899999863 3333333333221100 1123322223333333
Q ss_pred -------CCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHH----HhhhcCC----CeEEEEEcCcchhhHH
Q 020875 81 -------GVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASA----LEQHAAP----NCKVLVVANPANTNAL 139 (320)
Q Consensus 81 -------~aDvVi~~ag~~~~~---~~~---r~~~~~~n~~~~~~i~~~----i~~~~~~----~~~viv~snP~~~~~~ 139 (320)
..|+|||.||..... ..+ ....+..|+.....+++. +.+.+.+ ...+|++|+....
T Consensus 76 ~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~--- 152 (287)
T PRK06194 76 AALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGL--- 152 (287)
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhc---
Confidence 479999999875421 112 223467777766665555 4444311 1456666653211
Q ss_pred HHHHHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeeeE
Q 020875 140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVI 183 (320)
Q Consensus 140 ~~~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~ 183 (320)
.+.+..-.|+.++.-...+...+++.++.....++...
T Consensus 153 ------~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~ 190 (287)
T PRK06194 153 ------LAPPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASV 190 (287)
T ss_pred ------cCCCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEE
Confidence 12233336788887777788888888887777787544
No 89
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=98.64 E-value=2e-07 Score=79.44 Aligned_cols=103 Identities=21% Similarity=0.326 Sum_probs=68.2
Q ss_pred EEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHH---HHHH-Hh---cccC-------CCCcceEEe
Q 020875 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG---VKME-LV---DAAF-------PLLKGVVAT 72 (320)
Q Consensus 7 kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~---~~~d-l~---~~~~-------~~~~~v~~~ 72 (320)
||+|+| +|.+|..++..++..|+ +|+|+|.+++ .++. ...+ +. +... .....++.+
T Consensus 1 ~V~ViG-aG~mG~~iA~~~a~~G~-------~V~l~d~~~~--~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 70 (180)
T PF02737_consen 1 KVAVIG-AGTMGRGIAALFARAGY-------EVTLYDRSPE--ALERARKRIERLLDRLVRKGRLSQEEADAALARISFT 70 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTS-------EEEEE-SSHH--HHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEEE
T ss_pred CEEEEc-CCHHHHHHHHHHHhCCC-------cEEEEECChH--HHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhcccc
Confidence 799999 59999999999999997 9999999752 2221 1111 11 1110 013578888
Q ss_pred CChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchh
Q 020875 73 TDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136 (320)
Q Consensus 73 ~~~~~al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~ 136 (320)
+++.++. +||+||-+. .++.+.-+++...+++.++|++ |++||...+
T Consensus 71 ~dl~~~~-~adlViEai--------------~E~l~~K~~~~~~l~~~~~~~~--ilasnTSsl 117 (180)
T PF02737_consen 71 TDLEEAV-DADLVIEAI--------------PEDLELKQELFAELDEICPPDT--ILASNTSSL 117 (180)
T ss_dssp SSGGGGC-TESEEEE-S---------------SSHHHHHHHHHHHHCCS-TTS--EEEE--SSS
T ss_pred cCHHHHh-hhheehhhc--------------cccHHHHHHHHHHHHHHhCCCc--eEEecCCCC
Confidence 8876655 999999875 1235667899999999987776 577776543
No 90
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=98.61 E-value=3e-07 Score=82.37 Aligned_cols=173 Identities=12% Similarity=0.060 Sum_probs=116.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhccc-CC-CCcceEEeCChhhhcC--C
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-FP-LLKGVVATTDAVEACT--G 81 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~-~~-~~~~v~~~~~~~~al~--~ 81 (320)
|+++||||+||||++++..++.+..- .+|+.+|.-.-....+ ...++.+.. .. ...++.......+.++ +
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d-----~~v~~~DkLTYAgn~~-~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~ 74 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPD-----DHVVNLDKLTYAGNLE-NLADVEDSPRYRFVQGDICDRELVDRLFKEYQ 74 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCC-----ceEEEEecccccCCHH-HHHhhhcCCCceEEeccccCHHHHHHHHHhcC
Confidence 68999999999999999998876541 2688888632111111 112343321 11 1245544445566676 6
Q ss_pred CcEEEEeCCCCC--CCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcC-cc--hhhH--HHHHHHCCCCCCCcEE
Q 020875 82 VNIAVMVGGFPR--KEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN-PA--NTNA--LILKEFAPSIPAKNIT 154 (320)
Q Consensus 82 aDvVi~~ag~~~--~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~sn-P~--~~~~--~~~~~~~~~~~~~~i~ 154 (320)
.|+|+|.|.-.. ++-.....++..|+-++..++++++++. ..-+++-+|. -+ ++.. ..+.+ .+.+.|+..+
T Consensus 75 ~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~-~~frf~HISTDEVYG~l~~~~~~FtE-~tp~~PsSPY 152 (340)
T COG1088 75 PDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYW-GKFRFHHISTDEVYGDLGLDDDAFTE-TTPYNPSSPY 152 (340)
T ss_pred CCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhc-ccceEEEeccccccccccCCCCCccc-CCCCCCCCCc
Confidence 999999886432 2223467899999999999999999996 4346777763 12 1110 12233 3567777888
Q ss_pred EeehhhHHHHHHHHHHHcCCCCCCeeeeEEEc
Q 020875 155 CLTRLDHNRALGQISEKLNVQVSDVKNVIIWG 186 (320)
Q Consensus 155 ~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G 186 (320)
..|+-.+--|.+...+.+|++..-.++.+-+|
T Consensus 153 SASKAasD~lVray~~TYglp~~ItrcSNNYG 184 (340)
T COG1088 153 SASKAASDLLVRAYVRTYGLPATITRCSNNYG 184 (340)
T ss_pred chhhhhHHHHHHHHHHHcCCceEEecCCCCcC
Confidence 88888888889999999999987777776666
No 91
>PRK09135 pteridine reductase; Provisional
Probab=98.60 E-value=2.7e-07 Score=81.79 Aligned_cols=153 Identities=12% Similarity=0.098 Sum_probs=90.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC----CCCcceEEeCChhhhc
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF----PLLKGVVATTDAVEAC 79 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~----~~~~~v~~~~~~~~al 79 (320)
+.++|+|+||+|++|++++..|++.|+ +|++++++. .+.+.....++.+... ....+++...+..+++
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-------~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 76 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGY-------RVAIHYHRS-AAEADALAAELNALRPGSAAALQADLLDPDALPELV 76 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEcCCC-HHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHH
Confidence 447899999999999999999999887 888888753 1223322223332110 0112222222233333
Q ss_pred -------CCCcEEEEeCCCCCCC------CCCHHHHHHhhHHHHHHHHHHHhhhcC-CCeEEEEEcCcchhhHHHHHHHC
Q 020875 80 -------TGVNIAVMVGGFPRKE------GMERKDVMSKNVSIYKAQASALEQHAA-PNCKVLVVANPANTNALILKEFA 145 (320)
Q Consensus 80 -------~~aDvVi~~ag~~~~~------~~~r~~~~~~n~~~~~~i~~~i~~~~~-~~~~viv~snP~~~~~~~~~~~~ 145 (320)
...|+|||++|..... ..+..+.+..|+.....+.+.+.++-. ....++..++ . .. .
T Consensus 77 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~-~-------~~-~ 147 (249)
T PRK09135 77 AACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITD-I-------HA-E 147 (249)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeC-h-------hh-c
Confidence 3579999999863211 112345677898888888888765421 1234444432 1 11 1
Q ss_pred CCCCCCcEEEeehhhHHHHHHHHHHHcC
Q 020875 146 PSIPAKNITCLTRLDHNRALGQISEKLN 173 (320)
Q Consensus 146 ~~~~~~~i~~~t~ld~~r~~~~~a~~l~ 173 (320)
...++...|+.++.....+...+++.++
T Consensus 148 ~~~~~~~~Y~~sK~~~~~~~~~l~~~~~ 175 (249)
T PRK09135 148 RPLKGYPVYCAAKAALEMLTRSLALELA 175 (249)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHC
Confidence 2334444678887777777777777764
No 92
>PRK05865 hypothetical protein; Provisional
Probab=98.60 E-value=2.5e-07 Score=95.48 Aligned_cols=105 Identities=14% Similarity=0.142 Sum_probs=73.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcEE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDvV 85 (320)
|||+||||+||+|++++..|+.+|+ +|++++++.. +... ........++....++.++++++|+|
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~-------~Vv~l~R~~~-~~~~-------~~v~~v~gDL~D~~~l~~al~~vD~V 65 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGH-------EVVGIARHRP-DSWP-------SSADFIAADIRDATAVESAMTGADVV 65 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcC-------EEEEEECCch-hhcc-------cCceEEEeeCCCHHHHHHHHhCCCEE
Confidence 5899999999999999999999887 8999987531 1110 00000112232223566778899999
Q ss_pred EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcc
Q 020875 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPA 134 (320)
Q Consensus 86 i~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~ 134 (320)
||+|+.... ....|+..+.++++.+++.+ . .++|++|++.
T Consensus 66 VHlAa~~~~-------~~~vNv~GT~nLLeAa~~~g-v-kr~V~iSS~~ 105 (854)
T PRK05865 66 AHCAWVRGR-------NDHINIDGTANVLKAMAETG-T-GRIVFTSSGH 105 (854)
T ss_pred EECCCcccc-------hHHHHHHHHHHHHHHHHHcC-C-CeEEEECCcH
Confidence 999975421 35789999999999998875 2 3677777764
No 93
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=98.59 E-value=1.5e-07 Score=86.28 Aligned_cols=151 Identities=15% Similarity=0.173 Sum_probs=95.3
Q ss_pred EEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcC--CCcEEE
Q 020875 9 LVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT--GVNIAV 86 (320)
Q Consensus 9 ~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~--~aDvVi 86 (320)
+||||+||||++++..|+..|+ ++++..... ..|+.+.. ++.+.++ ++|+||
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~-------~v~~~~~~~--------~~Dl~~~~-----------~l~~~~~~~~~d~Vi 54 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGF-------TNLVLRTHK--------ELDLTRQA-----------DVEAFFAKEKPTYVI 54 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCC-------cEEEeeccc--------cCCCCCHH-----------HHHHHHhccCCCEEE
Confidence 4899999999999999998876 444443221 13444432 3444444 579999
Q ss_pred EeCCCCCC---CCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhH----HHHHHHC----CCCCCCcEEE
Q 020875 87 MVGGFPRK---EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA----LILKEFA----PSIPAKNITC 155 (320)
Q Consensus 87 ~~ag~~~~---~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~----~~~~~~~----~~~~~~~i~~ 155 (320)
|+|+.... ......++...|+....++++.+++.+ . .++|++|+.. +-. .-+.+.. +.-|....++
T Consensus 55 h~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~-~~~i~~SS~~-vyg~~~~~~~~E~~~~~~~~~p~~~~Y~ 131 (306)
T PLN02725 55 LAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHG-V-KKLLFLGSSC-IYPKFAPQPIPETALLTGPPEPTNEWYA 131 (306)
T ss_pred EeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcC-C-CeEEEeCcee-ecCCCCCCCCCHHHhccCCCCCCcchHH
Confidence 99976421 122345678899999999999999875 2 2566665421 100 0000100 0011112467
Q ss_pred eehhhHHHHHHHHHHHcCCCCCCeeeeEEEcCC
Q 020875 156 LTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (320)
Q Consensus 156 ~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~h 188 (320)
.++....++...+.+..+++...++...|+|.+
T Consensus 132 ~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~ 164 (306)
T PLN02725 132 IAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPH 164 (306)
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEEecceeCCC
Confidence 777766666666777889998888888889975
No 94
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=98.57 E-value=2.2e-07 Score=84.47 Aligned_cols=147 Identities=16% Similarity=0.240 Sum_probs=92.2
Q ss_pred EEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCC--cE
Q 020875 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV--NI 84 (320)
Q Consensus 7 kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~a--Dv 84 (320)
||+|+||+|++|++++..|++.|+ +|+++++. ..|+.+.. ++.++++++ |+
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~-------~v~~~~r~---------~~d~~~~~-----------~~~~~~~~~~~d~ 53 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGR-------VVVALTSS---------QLDLTDPE-----------ALERLLRAIRPDA 53 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCC-------EEEEeCCc---------ccCCCCHH-----------HHHHHHHhCCCCE
Confidence 689999999999999999999887 88888864 13444332 455666665 99
Q ss_pred EEEeCCCCCCCC--CCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHH----HHHHHCCCCCCCcEEEeeh
Q 020875 85 AVMVGGFPRKEG--MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSIPAKNITCLTR 158 (320)
Q Consensus 85 Vi~~ag~~~~~~--~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~----~~~~~~~~~~~~~i~~~t~ 158 (320)
|||+++...... ......+..|+..+.++++.+++.+ .++|++|... +... .+.+. ....+...++.++
T Consensus 54 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~v~~Ss~~-vy~~~~~~~~~E~-~~~~~~~~Y~~~K 128 (287)
T TIGR01214 54 VVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHG---ARLVHISTDY-VFDGEGKRPYRED-DATNPLNVYGQSK 128 (287)
T ss_pred EEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHcC---CeEEEEeeee-eecCCCCCCCCCC-CCCCCcchhhHHH
Confidence 999998643221 2345677899999999999998764 3566666421 1000 00010 0011122345444
Q ss_pred hhHHHHHHHHHHHcCCCCCCeeeeEEEcCCC
Q 020875 159 LDHNRALGQISEKLNVQVSDVKNVIIWGNHS 189 (320)
Q Consensus 159 ld~~r~~~~~a~~l~v~~~~v~~~~v~G~hg 189 (320)
....+ +.+.++.+..-+|...|+|.+.
T Consensus 129 ~~~E~----~~~~~~~~~~ilR~~~v~G~~~ 155 (287)
T TIGR01214 129 LAGEQ----AIRAAGPNALIVRTSWLYGGGG 155 (287)
T ss_pred HHHHH----HHHHhCCCeEEEEeeecccCCC
Confidence 44333 2334466777778777788764
No 95
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=98.57 E-value=4.4e-07 Score=81.85 Aligned_cols=159 Identities=14% Similarity=0.204 Sum_probs=102.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcC--CCc
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT--GVN 83 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~--~aD 83 (320)
|||+|+|++|++|+.|...|. .+. +|.-.++.+ +|+.+.. ...+.++ .-|
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~-------~v~a~~~~~---------~Ditd~~-----------~v~~~i~~~~PD 52 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEF-------EVIATDRAE---------LDITDPD-----------AVLEVIRETRPD 52 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCc-------eEEeccCcc---------ccccChH-----------HHHHHHHhhCCC
Confidence 569999999999999998887 333 787777642 5666654 4555565 459
Q ss_pred EEEEeCCCCCCCC--CCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcC-cc--hhhHHHHHHHCCCCCCCcEEEeeh
Q 020875 84 IAVMVGGFPRKEG--MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN-PA--NTNALILKEFAPSIPAKNITCLTR 158 (320)
Q Consensus 84 vVi~~ag~~~~~~--~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~sn-P~--~~~~~~~~~~~~~~~~~~i~~~t~ 158 (320)
+||++|.+..... .+++.-+..|+....++++.+++.+ +++|.+|. -+ +.-..-..+ .---.|..+||-|+
T Consensus 53 vVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g---a~lVhiSTDyVFDG~~~~~Y~E-~D~~~P~nvYG~sK 128 (281)
T COG1091 53 VVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVG---ARLVHISTDYVFDGEKGGPYKE-TDTPNPLNVYGRSK 128 (281)
T ss_pred EEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhC---CeEEEeecceEecCCCCCCCCC-CCCCCChhhhhHHH
Confidence 9999999875432 3455567899999999999999987 67777763 12 100000000 00112445889988
Q ss_pred hhHHHHHHHHHHHcCCCCCCeeeeEEEcCCCCccc-ccccccc
Q 020875 159 LDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQY-PDVNHAT 200 (320)
Q Consensus 159 ld~~r~~~~~a~~l~v~~~~v~~~~v~G~hg~~~~-~~~S~~~ 200 (320)
+-...+.... +-+.--+|..-++|++|.+.+ +.++.++
T Consensus 129 l~GE~~v~~~----~~~~~I~Rtswv~g~~g~nFv~tml~la~ 167 (281)
T COG1091 129 LAGEEAVRAA----GPRHLILRTSWVYGEYGNNFVKTMLRLAK 167 (281)
T ss_pred HHHHHHHHHh----CCCEEEEEeeeeecCCCCCHHHHHHHHhh
Confidence 8776654433 333344566667899995533 3444333
No 96
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=98.54 E-value=5.1e-07 Score=88.96 Aligned_cols=116 Identities=11% Similarity=0.056 Sum_probs=76.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcc-----c------C-CCCcceEEeC
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-----A------F-PLLKGVVATT 73 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~-----~------~-~~~~~v~~~~ 73 (320)
+.|+|+||+|++|++++..|+..|+ +|++++++. +++......+... . . ....++....
T Consensus 81 KvVLVTGATGgIG~aLAr~LLk~G~-------~Vval~Rn~--ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~e 151 (576)
T PLN03209 81 DLAFVAGATGKVGSRTVRELLKLGF-------RVRAGVRSA--QRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPD 151 (576)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHhhhhccccccccccCceEEEEecCCCHH
Confidence 5799999999999999999999887 788888864 3333222222110 0 0 0112333233
Q ss_pred ChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcC
Q 020875 74 DAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN 132 (320)
Q Consensus 74 ~~~~al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~sn 132 (320)
++.+++.++|+||+++|.......+....+..|...+.++++.+.+.+ - .++|++|.
T Consensus 152 sI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~ag-V-gRIV~VSS 208 (576)
T PLN03209 152 QIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAK-V-NHFILVTS 208 (576)
T ss_pred HHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhC-C-CEEEEEcc
Confidence 456678999999999986542222233456778899999999998765 2 36676664
No 97
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=98.54 E-value=2.8e-07 Score=83.61 Aligned_cols=173 Identities=15% Similarity=0.121 Sum_probs=107.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHH--HHHHHhcccC---CCCcceEEeCChhhhc
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG--VKMELVDAAF---PLLKGVVATTDAVEAC 79 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~--~~~dl~~~~~---~~~~~v~~~~~~~~al 79 (320)
.++|.||||+||||+|.+..|+++|+ +|+++|.-.+. .+.. ....+.+... ....++.....+.+.+
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy-------~v~~vDNl~n~-~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF 73 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGY-------GVVIVDNLNNS-YLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLF 73 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCC-------cEEEEeccccc-chhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHH
Confidence 46899999999999999999999998 89999975321 1111 1122222110 0112333333344444
Q ss_pred C--CCcEEEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhh---HH-HHHHHCCCCCCC
Q 020875 80 T--GVNIAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTN---AL-ILKEFAPSIPAK 151 (320)
Q Consensus 80 ~--~aDvVi~~ag~~~~--~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~---~~-~~~~~~~~~~~~ 151 (320)
+ .-|.|+|.|+.... +-+.+..+...|+-.+.++++.|++++ +.-++.++++.+- +. -+.+..+..-|.
T Consensus 74 ~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~---~~~~V~sssatvYG~p~~ip~te~~~t~~p~ 150 (343)
T KOG1371|consen 74 SEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN---VKALVFSSSATVYGLPTKVPITEEDPTDQPT 150 (343)
T ss_pred hhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC---CceEEEecceeeecCcceeeccCcCCCCCCC
Confidence 3 46999999876432 224567788899999999999999985 3444555444221 00 011111111133
Q ss_pred cEEEeehhhHHHHHHHHHHHcCCCCCCeeeeEEEcCC
Q 020875 152 NITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (320)
Q Consensus 152 ~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~h 188 (320)
..+|-|..-.+....-+.+.++.....+|.+.++|.|
T Consensus 151 ~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~ 187 (343)
T KOG1371|consen 151 NPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAH 187 (343)
T ss_pred CcchhhhHHHHHHHHhhhccccceEEEEEeccccCcc
Confidence 4677777777777777777777777777877777744
No 98
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.54 E-value=1.1e-06 Score=80.36 Aligned_cols=109 Identities=18% Similarity=0.240 Sum_probs=72.8
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHH-------Hhcc-cC------CCC
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKME-------LVDA-AF------PLL 66 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~d-------l~~~-~~------~~~ 66 (320)
|.....||+|+| +|.+|..++..++..|+ +|+++|+++ +.++..... +.+. .. ...
T Consensus 1 ~~~~~~~V~ViG-aG~mG~~iA~~~a~~G~-------~V~l~d~~~--~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~ 70 (286)
T PRK07819 1 MSDAIQRVGVVG-AGQMGAGIAEVCARAGV-------DVLVFETTE--ELATAGRNRIEKSLERAVSRGKLTERERDAAL 70 (286)
T ss_pred CCCCccEEEEEc-ccHHHHHHHHHHHhCCC-------EEEEEECCH--HHHHHHHHHHHHHHHHHHhcccCChhhHHHHH
Confidence 555667999999 59999999999999997 899999975 333211111 1111 00 012
Q ss_pred cceEEeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhc-CCCeEEEEEcCcchh
Q 020875 67 KGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHA-APNCKVLVVANPANT 136 (320)
Q Consensus 67 ~~v~~~~~~~~al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~-~~~~~viv~snP~~~ 136 (320)
.+++.++++ +++++||+||-+.- ++.+.-+++...+++.+ +|++ |++||....
T Consensus 71 ~~l~~~~~~-~~~~~~d~ViEav~--------------E~~~~K~~l~~~l~~~~~~~~~--il~snTS~~ 124 (286)
T PRK07819 71 ARLRFTTDL-GDFADRQLVIEAVV--------------EDEAVKTEIFAELDKVVTDPDA--VLASNTSSI 124 (286)
T ss_pred hCeEeeCCH-HHhCCCCEEEEecc--------------cCHHHHHHHHHHHHHhhCCCCc--EEEECCCCC
Confidence 466677776 77999999998751 23345566777888886 5665 456666544
No 99
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=98.53 E-value=2.9e-07 Score=83.70 Aligned_cols=97 Identities=21% Similarity=0.314 Sum_probs=67.8
Q ss_pred EEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcEEEE
Q 020875 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVM 87 (320)
Q Consensus 8 I~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDvVi~ 87 (320)
|+||||+||+|++++..|++.|+ +|+.+++++.. ..... ... ...+.. ....++++++|+|||
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~---~~~----~~~~~~-~~~~~~~~~~D~Vvh 63 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGH-------EVTILTRSPPA--GANTK---WEG----YKPWAP-LAESEALEGADAVIN 63 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCC-------EEEEEeCCCCC--CCccc---cee----eecccc-cchhhhcCCCCEEEE
Confidence 58999999999999999999886 89999986522 11100 000 001111 244677899999999
Q ss_pred eCCCCCCCC----CCHHHHHHhhHHHHHHHHHHHhhhc
Q 020875 88 VGGFPRKEG----MERKDVMSKNVSIYKAQASALEQHA 121 (320)
Q Consensus 88 ~ag~~~~~~----~~r~~~~~~n~~~~~~i~~~i~~~~ 121 (320)
+|+.+...+ ....++.+.|+..++++++.+++++
T Consensus 64 ~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~ 101 (292)
T TIGR01777 64 LAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAE 101 (292)
T ss_pred CCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcC
Confidence 998754221 1234577889999999999999875
No 100
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.53 E-value=1.4e-06 Score=80.84 Aligned_cols=148 Identities=13% Similarity=0.075 Sum_probs=92.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHH-------HHhccc---CCCCcceEEeCC
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKM-------ELVDAA---FPLLKGVVATTD 74 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~-------dl~~~~---~~~~~~v~~~~~ 74 (320)
..||+|+| +|.+|+.++..++..|+ +|+++|++++ .+..... .+.... ......++..++
T Consensus 7 i~~VaVIG-aG~MG~giA~~~a~aG~-------~V~l~D~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~ 76 (321)
T PRK07066 7 IKTFAAIG-SGVIGSGWVARALAHGL-------DVVAWDPAPG--AEAALRANVANAWPALERQGLAPGASPARLRFVAT 76 (321)
T ss_pred CCEEEEEC-cCHHHHHHHHHHHhCCC-------eEEEEeCCHH--HHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCC
Confidence 36999999 69999999999999998 8999999742 2211110 111010 011245667778
Q ss_pred hhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCC------
Q 020875 75 AVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSI------ 148 (320)
Q Consensus 75 ~~~al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~------ 148 (320)
+.+++++||+||-++ + +|.+.-+++...+.+.++|++ |+.||.+.....-+++.. ..
T Consensus 77 l~~av~~aDlViEav--p------------E~l~vK~~lf~~l~~~~~~~a--IlaSnTS~l~~s~la~~~-~~p~R~~g 139 (321)
T PRK07066 77 IEACVADADFIQESA--P------------EREALKLELHERISRAAKPDA--IIASSTSGLLPTDFYARA-THPERCVV 139 (321)
T ss_pred HHHHhcCCCEEEECC--c------------CCHHHHHHHHHHHHHhCCCCe--EEEECCCccCHHHHHHhc-CCcccEEE
Confidence 888999999999874 1 223455677788888886665 778887765443333322 21
Q ss_pred -----CCCc-----EEE--eehhhHHHHHHHHHHHcCCCCCCe
Q 020875 149 -----PAKN-----ITC--LTRLDHNRALGQISEKLNVQVSDV 179 (320)
Q Consensus 149 -----~~~~-----i~~--~t~ld~~r~~~~~a~~l~v~~~~v 179 (320)
|++. |+. .|.-++......+.+.+|..|--+
T Consensus 140 ~HffnP~~~~pLVEVv~g~~T~~e~~~~~~~f~~~lGk~pV~v 182 (321)
T PRK07066 140 GHPFNPVYLLPLVEVLGGERTAPEAVDAAMGIYRALGMRPLHV 182 (321)
T ss_pred EecCCccccCceEEEeCCCCCCHHHHHHHHHHHHHcCCEeEec
Confidence 2221 222 355555555556667788766444
No 101
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=98.50 E-value=2.2e-06 Score=76.67 Aligned_cols=158 Identities=17% Similarity=0.107 Sum_probs=93.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhh----
Q 020875 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA---- 78 (320)
Q Consensus 3 ~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a---- 78 (320)
.+.++++|+||+|++|.+++..|+++|. +|++.|++. +.+.....++.........++....+..++
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 74 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGA-------RVVIADIKP--ARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAA 74 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEcCCH--HHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHH
Confidence 3456899999999999999999999987 899999864 333332223321110111122222222222
Q ss_pred ---cCCCcEEEEeCCCCCCCC------CCHHHHHHhhHHHHHHHHHHHhhhc---CCCeEEEEEcCcchhhHHHHHHHCC
Q 020875 79 ---CTGVNIAVMVGGFPRKEG------MERKDVMSKNVSIYKAQASALEQHA---APNCKVLVVANPANTNALILKEFAP 146 (320)
Q Consensus 79 ---l~~aDvVi~~ag~~~~~~------~~r~~~~~~n~~~~~~i~~~i~~~~---~~~~~viv~snP~~~~~~~~~~~~~ 146 (320)
+...|++||++|...... .+..+.+..|+.....+.+.+.++- ..++++|++|+.... .
T Consensus 75 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~---------~ 145 (257)
T PRK07067 75 VERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGR---------R 145 (257)
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhC---------C
Confidence 346899999998643111 1233457788888877777775431 123567777753211 1
Q ss_pred CCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 147 ~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
+.+..-.|+.++.....+.+.+++.+. +..++
T Consensus 146 ~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~ 177 (257)
T PRK07067 146 GEALVSHYCATKAAVISYTQSAALALI--RHGIN 177 (257)
T ss_pred CCCCCchhhhhHHHHHHHHHHHHHHhc--ccCeE
Confidence 233333567777666667777777654 34555
No 102
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=98.50 E-value=6.5e-07 Score=74.57 Aligned_cols=97 Identities=20% Similarity=0.236 Sum_probs=65.5
Q ss_pred EEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC------CCCcceEEeCChhhhcC
Q 020875 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF------PLLKGVVATTDAVEACT 80 (320)
Q Consensus 7 kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~------~~~~~v~~~~~~~~al~ 80 (320)
||+|+| +|..|.+++..|..+|+ +|.|+.+++ +.++.. .-.+... .....+.+++++.++++
T Consensus 1 KI~ViG-aG~~G~AlA~~la~~g~-------~V~l~~~~~--~~~~~i--~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~ 68 (157)
T PF01210_consen 1 KIAVIG-AGNWGTALAALLADNGH-------EVTLWGRDE--EQIEEI--NETRQNPKYLPGIKLPENIKATTDLEEALE 68 (157)
T ss_dssp EEEEES-SSHHHHHHHHHHHHCTE-------EEEEETSCH--HHHHHH--HHHTSETTTSTTSBEETTEEEESSHHHHHT
T ss_pred CEEEEC-cCHHHHHHHHHHHHcCC-------EEEEEeccH--HHHHHH--HHhCCCCCCCCCcccCcccccccCHHHHhC
Confidence 899999 59999999999999997 999999963 222221 1122211 12357888999999999
Q ss_pred CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEc
Q 020875 81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA 131 (320)
Q Consensus 81 ~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~s 131 (320)
++|+||++. |. ...+++++.++.+-+++..+++++
T Consensus 69 ~ad~Iiiav--Ps--------------~~~~~~~~~l~~~l~~~~~ii~~~ 103 (157)
T PF01210_consen 69 DADIIIIAV--PS--------------QAHREVLEQLAPYLKKGQIIISAT 103 (157)
T ss_dssp T-SEEEE-S---G--------------GGHHHHHHHHTTTSHTT-EEEETS
T ss_pred cccEEEecc--cH--------------HHHHHHHHHHhhccCCCCEEEEec
Confidence 999999874 22 234677888888763444444433
No 103
>PRK12320 hypothetical protein; Provisional
Probab=98.48 E-value=4.1e-07 Score=92.00 Aligned_cols=100 Identities=13% Similarity=0.164 Sum_probs=68.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC-CCcceEEeCChhhhcCCCcE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~-~~~~v~~~~~~~~al~~aDv 84 (320)
|||+||||+||+|++++..|+.+|+ +|+.+|+.+. .. .+.... ...++... ...+++.++|+
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~-------~Vi~ldr~~~--~~-------~~~~ve~v~~Dl~d~-~l~~al~~~D~ 63 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGH-------TVSGIAQHPH--DA-------LDPRVDYVCASLRNP-VLQELAGEADA 63 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-------EEEEEeCChh--hc-------ccCCceEEEccCCCH-HHHHHhcCCCE
Confidence 5899999999999999999999887 8999997531 10 000000 11222222 24566789999
Q ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEc
Q 020875 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA 131 (320)
Q Consensus 85 Vi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~s 131 (320)
|||+|+... .. -...|+..+.++++.+++.+ +++|++|
T Consensus 64 VIHLAa~~~--~~----~~~vNv~Gt~nLleAA~~~G---vRiV~~S 101 (699)
T PRK12320 64 VIHLAPVDT--SA----PGGVGITGLAHVANAAARAG---ARLLFVS 101 (699)
T ss_pred EEEcCccCc--cc----hhhHHHHHHHHHHHHHHHcC---CeEEEEE
Confidence 999997532 11 12478999999999998875 4666666
No 104
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=98.48 E-value=8.2e-07 Score=81.68 Aligned_cols=166 Identities=14% Similarity=0.126 Sum_probs=95.2
Q ss_pred EEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhh----cCCCc
Q 020875 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA----CTGVN 83 (320)
Q Consensus 8 I~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a----l~~aD 83 (320)
|+||||+|++|++++..|..+|+. +|.++++......+. .+... ....++......... +.++|
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~------~v~~~~~~~~~~~~~----~~~~~--~~~~d~~~~~~~~~~~~~~~~~~D 68 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGIT------DILVVDNLRDGHKFL----NLADL--VIADYIDKEDFLDRLEKGAFGKIE 68 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCc------eEEEEecCCCchhhh----hhhhe--eeeccCcchhHHHHHHhhccCCCC
Confidence 689999999999999999998852 677888653212111 11100 011112211122222 25799
Q ss_pred EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHH---HHHHHCCCCCCCcEEEeehhh
Q 020875 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL---ILKEFAPSIPAKNITCLTRLD 160 (320)
Q Consensus 84 vVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~---~~~~~~~~~~~~~i~~~t~ld 160 (320)
+|||+|+.......+..+.+..|+..+.++++.+++.+ .++|++|+. .+... ...+..+-..+...++.++..
T Consensus 69 ~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~---~~~v~~SS~-~vy~~~~~~~~e~~~~~~p~~~Y~~sK~~ 144 (314)
T TIGR02197 69 AIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKG---IPFIYASSA-ATYGDGEAGFREGRELERPLNVYGYSKFL 144 (314)
T ss_pred EEEECccccCccccchHHHHHHHHHHHHHHHHHHHHhC---CcEEEEccH-HhcCCCCCCcccccCcCCCCCHHHHHHHH
Confidence 99999986543333455677899999999999998864 356666642 11100 000100001122356666665
Q ss_pred HHHHHHHH-H-HHcCCCCCCeeeeEEEcCCC
Q 020875 161 HNRALGQI-S-EKLNVQVSDVKNVIIWGNHS 189 (320)
Q Consensus 161 ~~r~~~~~-a-~~l~v~~~~v~~~~v~G~hg 189 (320)
...+.... + +..+++...+|...|+|...
T Consensus 145 ~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~ 175 (314)
T TIGR02197 145 FDQYVRRRVLPEALSAQVVGLRYFNVYGPRE 175 (314)
T ss_pred HHHHHHHHhHhhccCCceEEEEEeeccCCCC
Confidence 55543322 2 23456777788888889653
No 105
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=98.47 E-value=3.9e-07 Score=77.26 Aligned_cols=98 Identities=21% Similarity=0.250 Sum_probs=67.7
Q ss_pred EEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcEEEE
Q 020875 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVM 87 (320)
Q Consensus 8 I~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDvVi~ 87 (320)
|+|+||+|++|+.++..|+++++ +|+++-+++ +++.. .........++....++.++++++|+||+
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-------~V~~~~R~~--~~~~~-----~~~~~~~~~d~~d~~~~~~al~~~d~vi~ 66 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-------EVTALVRSP--SKAED-----SPGVEIIQGDLFDPDSVKAALKGADAVIH 66 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-------EEEEEESSG--GGHHH-----CTTEEEEESCTTCHHHHHHHHTTSSEEEE
T ss_pred eEEECCCChHHHHHHHHHHHCCC-------EEEEEecCc--hhccc-----ccccccceeeehhhhhhhhhhhhcchhhh
Confidence 78999999999999999999996 899888864 33321 10000111223223357889999999999
Q ss_pred eCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcC
Q 020875 88 VGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN 132 (320)
Q Consensus 88 ~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~sn 132 (320)
++|.+.+ + .+.++.+++.+++.+ . .+++++|.
T Consensus 67 ~~~~~~~------~-----~~~~~~~~~a~~~~~-~-~~~v~~s~ 98 (183)
T PF13460_consen 67 AAGPPPK------D-----VDAAKNIIEAAKKAG-V-KRVVYLSS 98 (183)
T ss_dssp CCHSTTT------H-----HHHHHHHHHHHHHTT-S-SEEEEEEE
T ss_pred hhhhhcc------c-----ccccccccccccccc-c-ccceeeec
Confidence 9875542 1 677889999998875 3 25666553
No 106
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.46 E-value=2.7e-06 Score=76.07 Aligned_cols=157 Identities=17% Similarity=0.150 Sum_probs=87.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhh---
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA--- 78 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~a--- 78 (320)
.++++||||+|++|++++..|++.|. +|+++++++ +.......++.+.... ...++....+..++
T Consensus 7 ~~~vlItGasg~iG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 77 (262)
T PRK13394 7 GKTAVVTGAASGIGKEIALELARAGA-------AVAIADLNQ--DGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDK 77 (262)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-------eEEEEeCCh--HHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHH
Confidence 46899999999999999999999887 789999874 2333223333322110 01122211122222
Q ss_pred ----cCCCcEEEEeCCCCCCC---C---CCHHHHHHhhHHH----HHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHH
Q 020875 79 ----CTGVNIAVMVGGFPRKE---G---MERKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKEF 144 (320)
Q Consensus 79 ----l~~aDvVi~~ag~~~~~---~---~~r~~~~~~n~~~----~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~ 144 (320)
+...|+|||++|..... . ....+.+..|+.. ++.+.+.+.+.. +..++|++|.-.. .
T Consensus 78 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~~~~iv~~ss~~~-------~- 148 (262)
T PRK13394 78 VAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDD-RGGVVIYMGSVHS-------H- 148 (262)
T ss_pred HHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhc-CCcEEEEEcchhh-------c-
Confidence 23589999999874311 1 1123456677776 666677663333 3356666664211 1
Q ss_pred CCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeee
Q 020875 145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182 (320)
Q Consensus 145 ~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~ 182 (320)
.+.+....++.++.....+-+.+++.+. +..++..
T Consensus 149 -~~~~~~~~y~~sk~a~~~~~~~la~~~~--~~~i~v~ 183 (262)
T PRK13394 149 -EASPLKSAYVTAKHGLLGLARVLAKEGA--KHNVRSH 183 (262)
T ss_pred -CCCCCCcccHHHHHHHHHHHHHHHHHhh--hcCeEEE
Confidence 1233333566666555555555666642 3456543
No 107
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.45 E-value=1.7e-06 Score=76.78 Aligned_cols=160 Identities=19% Similarity=0.169 Sum_probs=87.3
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhccc--CCCCcceEEeCChhhh
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA--FPLLKGVVATTDAVEA 78 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~--~~~~~~v~~~~~~~~a 78 (320)
|..+.++++|+||+|++|++++..|+++|+ +|+++++++ +++.....++.+.. .....++....+...+
T Consensus 1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 71 (251)
T PRK07231 1 MRLEGKVAIVTGASSGIGEGIARRFAAEGA-------RVVVTDRNE--EAAERVAAEILAGGRAIAVAADVSDEADVEAA 71 (251)
T ss_pred CCcCCcEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 666778999999999999999999999887 799999874 33332223333100 0011122222222222
Q ss_pred -------cCCCcEEEEeCCCCCCCC----CC---HHHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEEcCcchhhHHHHH
Q 020875 79 -------CTGVNIAVMVGGFPRKEG----ME---RKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILK 142 (320)
Q Consensus 79 -------l~~aDvVi~~ag~~~~~~----~~---r~~~~~~n~~~~~~i~~~i~~~~--~~~~~viv~snP~~~~~~~~~ 142 (320)
+...|+||+++|...... .+ ..+.+..|+.....+.+.+..+. .....+|++|+....
T Consensus 72 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~------ 145 (251)
T PRK07231 72 VAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGL------ 145 (251)
T ss_pred HHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhc------
Confidence 346799999998742111 11 23456677765555554444321 023456666653211
Q ss_pred HHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 143 ~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
...+....++.++.....+...+++.++ +.+|+
T Consensus 146 ---~~~~~~~~y~~sk~~~~~~~~~~a~~~~--~~~i~ 178 (251)
T PRK07231 146 ---RPRPGLGWYNASKGAVITLTKALAAELG--PDKIR 178 (251)
T ss_pred ---CCCCCchHHHHHHHHHHHHHHHHHHHhh--hhCeE
Confidence 1122222345555444455566666654 33455
No 108
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=98.44 E-value=6.2e-06 Score=75.73 Aligned_cols=110 Identities=23% Similarity=0.275 Sum_probs=77.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhc--ccCC------CCcceEEeCChh
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD--AAFP------LLKGVVATTDAV 76 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~--~~~~------~~~~v~~~~~~~ 76 (320)
++||+|+| +|..|++|+..|.++++ +|+++.+++ + ...++.. .... +...+..++|+.
T Consensus 1 ~~kI~ViG-aGswGTALA~~la~ng~-------~V~lw~r~~--~----~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~ 66 (329)
T COG0240 1 MMKIAVIG-AGSWGTALAKVLARNGH-------EVRLWGRDE--E----IVAEINETRENPKYLPGILLPPNLKATTDLA 66 (329)
T ss_pred CceEEEEc-CChHHHHHHHHHHhcCC-------eeEEEecCH--H----HHHHHHhcCcCccccCCccCCcccccccCHH
Confidence 47999999 59999999999999997 899999874 2 2233432 2222 246788889999
Q ss_pred hhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcC-----cchhhHHHHHHH
Q 020875 77 EACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN-----PANTNALILKEF 144 (320)
Q Consensus 77 ~al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~sn-----P~~~~~~~~~~~ 144 (320)
++++++|+|++.. |. +.++++++.+..+-.++.+++.+|- +...+..++.+.
T Consensus 67 ~a~~~ad~iv~av--Ps--------------~~~r~v~~~l~~~l~~~~~iv~~sKGie~~t~~l~seii~e~ 123 (329)
T COG0240 67 EALDGADIIVIAV--PS--------------QALREVLRQLKPLLLKDAIIVSATKGLEPETGRLLSEIIEEE 123 (329)
T ss_pred HHHhcCCEEEEEC--Ch--------------HHHHHHHHHHhhhccCCCeEEEEeccccCCCcchHHHHHHHH
Confidence 9999999999974 32 4556666666544445667777762 234456666654
No 109
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.43 E-value=1e-06 Score=89.63 Aligned_cols=117 Identities=16% Similarity=0.185 Sum_probs=72.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHh--cCcCCCCCCeEEEEEecCCccchhHHHHHHHhccc-CCCCcceEEe-----CChhh
Q 020875 6 VRVLVTGAAGQIGYALVPMIAR--GVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-FPLLKGVVAT-----TDAVE 77 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~--~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~-~~~~~~v~~~-----~~~~~ 77 (320)
|||+||||+||+|++++..|+. .++ +|++++++.....+......+.+.. .....++... ....+
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~-------~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~ 73 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREA-------TVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIA 73 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCC-------EEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHH
Confidence 5899999999999999999984 454 8998988642222221111110000 0011122211 11223
Q ss_pred hcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcC
Q 020875 78 ACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN 132 (320)
Q Consensus 78 al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~sn 132 (320)
.++++|+|||+|+.... ..+..+....|+..++++++.+++.. . .+++.+|.
T Consensus 74 ~l~~~D~Vih~Aa~~~~-~~~~~~~~~~nv~gt~~ll~~a~~~~-~-~~~v~~SS 125 (657)
T PRK07201 74 ELGDIDHVVHLAAIYDL-TADEEAQRAANVDGTRNVVELAERLQ-A-ATFHHVSS 125 (657)
T ss_pred HhcCCCEEEECceeecC-CCCHHHHHHHHhHHHHHHHHHHHhcC-C-CeEEEEec
Confidence 34899999999986432 23455677899999999999998874 2 34565553
No 110
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=98.43 E-value=3.4e-06 Score=74.57 Aligned_cols=161 Identities=15% Similarity=0.197 Sum_probs=88.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhh----
Q 020875 2 AKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVE---- 77 (320)
Q Consensus 2 ~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~---- 77 (320)
+.+.++++|+||+|++|++++..|+++|. .|.+.+++. ++++....++.........++....+..+
T Consensus 3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~-------~v~~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 73 (245)
T PRK12936 3 DLSGRKALVTGASGGIGEEIARLLHAQGA-------IVGLHGTRV--EKLEALAAELGERVKIFPANLSDRDEVKALGQK 73 (245)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEcCCH--HHHHHHHHHhCCceEEEEccCCCHHHHHHHHHH
Confidence 34567999999999999999999999886 677777653 33332222221100000112211112222
Q ss_pred ---hcCCCcEEEEeCCCCCCC---C---CCHHHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEEcCcchhhHHHHHHHCC
Q 020875 78 ---ACTGVNIAVMVGGFPRKE---G---MERKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEFAP 146 (320)
Q Consensus 78 ---al~~aDvVi~~ag~~~~~---~---~~r~~~~~~n~~~~~~i~~~i~~~~--~~~~~viv~snP~~~~~~~~~~~~~ 146 (320)
.+...|+||+++|..... . .+..+.+..|+.....+++.+.+.. .+...+|++|+.... .
T Consensus 74 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~---------~ 144 (245)
T PRK12936 74 AEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGV---------T 144 (245)
T ss_pred HHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhC---------c
Confidence 234689999999874321 1 1233456778777666666554320 123567777764321 1
Q ss_pred CCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeee
Q 020875 147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182 (320)
Q Consensus 147 ~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~ 182 (320)
+.|....|+.++.....+.+.+++.+. +..++..
T Consensus 145 ~~~~~~~Y~~sk~a~~~~~~~la~~~~--~~~i~v~ 178 (245)
T PRK12936 145 GNPGQANYCASKAGMIGFSKSLAQEIA--TRNVTVN 178 (245)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHhh--HhCeEEE
Confidence 223223466666555556666666643 2345533
No 111
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.42 E-value=3.8e-06 Score=76.92 Aligned_cols=106 Identities=23% Similarity=0.247 Sum_probs=68.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHH---hc---ccCC---------CCcce
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMEL---VD---AAFP---------LLKGV 69 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl---~~---~~~~---------~~~~v 69 (320)
.+||+|+| +|.+|+.++..|+..|+ +|+++|+++ +.++.....+ .+ .... ....+
T Consensus 3 ~~kIaViG-aG~mG~~iA~~la~~G~-------~V~l~d~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 72 (287)
T PRK08293 3 IKNVTVAG-AGVLGSQIAFQTAFHGF-------DVTIYDISD--EALEKAKERIAKLADRYVRDLEATKEAPAEAALNRI 72 (287)
T ss_pred ccEEEEEC-CCHHHHHHHHHHHhcCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCe
Confidence 45999999 59999999999999887 899999874 2222111111 00 0000 12356
Q ss_pred EEeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchh
Q 020875 70 VATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136 (320)
Q Consensus 70 ~~~~~~~~al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~ 136 (320)
+.++++.+++++||+||.+.. .+.+..+++.+.+.++.++++ ++++|.+..
T Consensus 73 ~~~~d~~~a~~~aDlVieavp--------------e~~~~k~~~~~~l~~~~~~~~--ii~sntSt~ 123 (287)
T PRK08293 73 TLTTDLAEAVKDADLVIEAVP--------------EDPEIKGDFYEELAKVAPEKT--IFATNSSTL 123 (287)
T ss_pred EEeCCHHHHhcCCCEEEEecc--------------CCHHHHHHHHHHHHhhCCCCC--EEEECcccC
Confidence 677888888999999999852 113445666777777764555 345555443
No 112
>PRK07806 short chain dehydrogenase; Provisional
Probab=98.42 E-value=1.2e-06 Score=77.76 Aligned_cols=169 Identities=17% Similarity=0.136 Sum_probs=93.4
Q ss_pred CCC-CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChh
Q 020875 1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAV 76 (320)
Q Consensus 1 m~~-~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~ 76 (320)
|++ +.+++.|+||+|++|.+++..|+.+|+ +|++++++.. +.++....++...... ...++....+..
T Consensus 1 ~~~~~~k~vlItGasggiG~~l~~~l~~~G~-------~V~~~~r~~~-~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~ 72 (248)
T PRK07806 1 MGDLPGKTALVTGSSRGIGADTAKILAGAGA-------HVVVNYRQKA-PRANKVVAEIEAAGGRASAVGADLTDEESVA 72 (248)
T ss_pred CCCCCCcEEEEECCCCcHHHHHHHHHHHCCC-------EEEEEeCCch-HhHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence 543 347899999999999999999999887 7888877532 2222222223221100 112222222222
Q ss_pred hhc-------CCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCC
Q 020875 77 EAC-------TGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIP 149 (320)
Q Consensus 77 ~al-------~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~ 149 (320)
+++ .+.|+||+.+|.......+..+.+..|......+++.+.++.....++|++|..... . .......|
T Consensus 73 ~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~---~-~~~~~~~~ 148 (248)
T PRK07806 73 ALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAH---F-IPTVKTMP 148 (248)
T ss_pred HHHHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhh---c-CccccCCc
Confidence 222 368999999876432222334456778888888888887764233567777653210 0 00001122
Q ss_pred CCcEEEeehhhHHHHHHHHHHHcCCCCCCeeeeE
Q 020875 150 AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVI 183 (320)
Q Consensus 150 ~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~ 183 (320)
....|+.++.-...+-+.++..+. +..++...
T Consensus 149 ~~~~Y~~sK~a~e~~~~~l~~~~~--~~~i~v~~ 180 (248)
T PRK07806 149 EYEPVARSKRAGEDALRALRPELA--EKGIGFVV 180 (248)
T ss_pred cccHHHHHHHHHHHHHHHHHHHhh--ccCeEEEE
Confidence 111345666656666556666554 44676444
No 113
>PRK07774 short chain dehydrogenase; Provisional
Probab=98.41 E-value=3.3e-06 Score=75.02 Aligned_cols=157 Identities=21% Similarity=0.174 Sum_probs=89.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhh--
Q 020875 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE-- 77 (320)
Q Consensus 3 ~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~-- 77 (320)
.+.++++||||+|++|.+++..|++.|. +|+++++++ +.+.....++.+.... ...++....+..+
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~-------~vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 74 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREGA-------SVVVADINA--EGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMA 74 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence 3457899999999999999999999886 899999864 2222222223221101 1112221111111
Q ss_pred -----hcCCCcEEEEeCCCCCC----C--CCC---HHHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEEcCcchhhHHHH
Q 020875 78 -----ACTGVNIAVMVGGFPRK----E--GME---RKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALIL 141 (320)
Q Consensus 78 -----al~~aDvVi~~ag~~~~----~--~~~---r~~~~~~n~~~~~~i~~~i~~~~--~~~~~viv~snP~~~~~~~~ 141 (320)
.+...|+|||+||.... + ..+ ..+.+..|+.....+.+.+.++. .+..+++++|+-.
T Consensus 75 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~------- 147 (250)
T PRK07774 75 DATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTA------- 147 (250)
T ss_pred HHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEeccc-------
Confidence 22468999999997421 1 112 22356678777777777666542 1234677776422
Q ss_pred HHHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeee
Q 020875 142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182 (320)
Q Consensus 142 ~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~ 182 (320)
.+++...|+.++.....+.+.+++.+. ...|+..
T Consensus 148 -----~~~~~~~Y~~sK~a~~~~~~~l~~~~~--~~~i~v~ 181 (250)
T PRK07774 148 -----AWLYSNFYGLAKVGLNGLTQQLARELG--GMNIRVN 181 (250)
T ss_pred -----ccCCccccHHHHHHHHHHHHHHHHHhC--ccCeEEE
Confidence 122223466666655566666777664 3345543
No 114
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=98.41 E-value=5.9e-07 Score=85.86 Aligned_cols=115 Identities=17% Similarity=0.141 Sum_probs=72.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHH--HHHHHhc--ccC-CCCcceEEeCChhhh
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG--VKMELVD--AAF-PLLKGVVATTDAVEA 78 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~--~~~dl~~--~~~-~~~~~v~~~~~~~~a 78 (320)
+.+||+|+||+|++|++++..|+++|+ +|++++++.. +... ...++.. ... ....++....++.++
T Consensus 59 ~~~kVLVtGatG~IG~~l~~~Ll~~G~-------~V~~l~R~~~--~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~ 129 (390)
T PLN02657 59 KDVTVLVVGATGYIGKFVVRELVRRGY-------NVVAVAREKS--GIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKV 129 (390)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEEechh--hccccchhhHHhhhcCCceEEEeeCCCHHHHHHH
Confidence 457999999999999999999999887 8888888642 1110 0001110 000 011233333345566
Q ss_pred cC----CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcC
Q 020875 79 CT----GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN 132 (320)
Q Consensus 79 l~----~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~sn 132 (320)
++ ++|+||++++.+... ..+....|.....++++.+++.+ - .++|++|+
T Consensus 130 ~~~~~~~~D~Vi~~aa~~~~~---~~~~~~vn~~~~~~ll~aa~~~g-v-~r~V~iSS 182 (390)
T PLN02657 130 LFSEGDPVDVVVSCLASRTGG---VKDSWKIDYQATKNSLDAGREVG-A-KHFVLLSA 182 (390)
T ss_pred HHHhCCCCcEEEECCccCCCC---CccchhhHHHHHHHHHHHHHHcC-C-CEEEEEee
Confidence 66 599999988753211 12335678888899999998875 2 35666664
No 115
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=98.40 E-value=4.7e-06 Score=73.27 Aligned_cols=103 Identities=14% Similarity=0.124 Sum_probs=64.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC--CCcceEEeCChhhhcCCCc
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP--LLKGVVATTDAVEACTGVN 83 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~--~~~~v~~~~~~~~al~~aD 83 (320)
|||+|+||+|.+|++++..|.+.|+ +|.++++++ ++++....+..+.... ....+.. ++..++++++|
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~-------~V~v~~r~~--~~~~~l~~~~~~~~~~~g~~~~~~~-~~~~ea~~~aD 70 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGN-------KIIIGSRDL--EKAEEAAAKALEELGHGGSDIKVTG-ADNAEAAKRAD 70 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC-------EEEEEEcCH--HHHHHHHHHHHhhccccCCCceEEE-eChHHHHhcCC
Confidence 6899998679999999999999886 889999864 4444333333221100 1112222 24567899999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcch
Q 020875 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN 135 (320)
Q Consensus 84 vVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~ 135 (320)
+||++... ..+.++++.+.... .+..+|-++||.+
T Consensus 71 vVilavp~----------------~~~~~~l~~l~~~l-~~~vvI~~~ngi~ 105 (219)
T TIGR01915 71 VVILAVPW----------------DHVLKTLESLRDEL-SGKLVISPVVPLA 105 (219)
T ss_pred EEEEECCH----------------HHHHHHHHHHHHhc-cCCEEEEeccCce
Confidence 99998631 11233334444333 2346777899964
No 116
>PRK05717 oxidoreductase; Validated
Probab=98.40 E-value=1.8e-06 Score=77.18 Aligned_cols=150 Identities=16% Similarity=0.116 Sum_probs=89.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhh-------h
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVE-------A 78 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~-------a 78 (320)
++++||||+|++|++++..|++.|. +|+++|+++ ++......++.........++....+..+ .
T Consensus 11 k~vlItG~sg~IG~~~a~~l~~~g~-------~v~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 81 (255)
T PRK05717 11 RVALVTGAARGIGLGIAAWLIAEGW-------QVVLADLDR--ERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQ 81 (255)
T ss_pred CEEEEeCCcchHHHHHHHHHHHcCC-------EEEEEcCCH--HHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 5799999999999999999999886 899998763 22221111111100001112222112211 1
Q ss_pred cCCCcEEEEeCCCCCCCC-----CC---HHHHHHhhHHHHHHHHHHHhhhc-CCCeEEEEEcCcchhhHHHHHHHCCCCC
Q 020875 79 CTGVNIAVMVGGFPRKEG-----ME---RKDVMSKNVSIYKAQASALEQHA-APNCKVLVVANPANTNALILKEFAPSIP 149 (320)
Q Consensus 79 l~~aDvVi~~ag~~~~~~-----~~---r~~~~~~n~~~~~~i~~~i~~~~-~~~~~viv~snP~~~~~~~~~~~~~~~~ 149 (320)
+...|++||.||...... .+ ..+.+..|+.....+.+.+.++- .....+|++|+.... .+.+
T Consensus 82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~---------~~~~ 152 (255)
T PRK05717 82 FGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRAR---------QSEP 152 (255)
T ss_pred hCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhc---------CCCC
Confidence 235799999998753211 12 23567889888888888886531 123567777754311 1222
Q ss_pred CCcEEEeehhhHHHHHHHHHHHcC
Q 020875 150 AKNITCLTRLDHNRALGQISEKLN 173 (320)
Q Consensus 150 ~~~i~~~t~ld~~r~~~~~a~~l~ 173 (320)
..-.|+.++.-...+...+++.++
T Consensus 153 ~~~~Y~~sKaa~~~~~~~la~~~~ 176 (255)
T PRK05717 153 DTEAYAASKGGLLALTHALAISLG 176 (255)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhc
Confidence 223577777766677778888876
No 117
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=98.40 E-value=3e-07 Score=84.20 Aligned_cols=156 Identities=13% Similarity=0.194 Sum_probs=88.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcC--CCc
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT--GVN 83 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~--~aD 83 (320)
|||+|+||+|++|+++...|..+++ +++.+++.. .|+.|.. ...+.++ ..|
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~-------~v~~~~r~~---------~dl~d~~-----------~~~~~~~~~~pd 53 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGY-------EVIATSRSD---------LDLTDPE-----------AVAKLLEAFKPD 53 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSE-------EEEEESTTC---------S-TTSHH-----------HHHHHHHHH--S
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCC-------EEEEeCchh---------cCCCCHH-----------HHHHHHHHhCCC
Confidence 7999999999999999999998876 788786541 2444332 1222222 489
Q ss_pred EEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCc-c--hhhHHHHHHHCCCCCCCcEEEeeh
Q 020875 84 IAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANP-A--NTNALILKEFAPSIPAKNITCLTR 158 (320)
Q Consensus 84 vVi~~ag~~~~~--~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP-~--~~~~~~~~~~~~~~~~~~i~~~t~ 158 (320)
+||++|+..... ...+..-...|+.....+++.+.+.+ +++|.+|.= + +.-..-..+. ....|...+|-++
T Consensus 54 ~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~---~~li~~STd~VFdG~~~~~y~E~-d~~~P~~~YG~~K 129 (286)
T PF04321_consen 54 VVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERG---ARLIHISTDYVFDGDKGGPYTED-DPPNPLNVYGRSK 129 (286)
T ss_dssp EEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT----EEEEEEEGGGS-SSTSSSB-TT-S----SSHHHHHH
T ss_pred eEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcC---CcEEEeeccEEEcCCcccccccC-CCCCCCCHHHHHH
Confidence 999999875321 12455677899999999999999875 677777742 1 0000000110 0112334678788
Q ss_pred hhHHHHHHHHHHHcCCCCCCeeeeEEEcCCCCcccccc
Q 020875 159 LDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDV 196 (320)
Q Consensus 159 ld~~r~~~~~a~~l~v~~~~v~~~~v~G~hg~~~~~~~ 196 (320)
+..++.... ... +..-+|...++|.++.+.+-.+
T Consensus 130 ~~~E~~v~~---~~~-~~~IlR~~~~~g~~~~~~~~~~ 163 (286)
T PF04321_consen 130 LEGEQAVRA---ACP-NALILRTSWVYGPSGRNFLRWL 163 (286)
T ss_dssp HHHHHHHHH---H-S-SEEEEEE-SEESSSSSSHHHHH
T ss_pred HHHHHHHHH---hcC-CEEEEecceecccCCCchhhhH
Confidence 776665433 222 4445566567898776554433
No 118
>PRK06180 short chain dehydrogenase; Provisional
Probab=98.39 E-value=5.7e-06 Score=75.07 Aligned_cols=151 Identities=13% Similarity=0.075 Sum_probs=83.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhc----
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC---- 79 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al---- 79 (320)
.+++|+||||+|++|++++..|+..|+ +|+++++++ ++++...............++....+..+++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~-------~V~~~~r~~--~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~ 73 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH-------RVVGTVRSE--AARADFEALHPDRALARLLDVTDFDAIDAVVADAE 73 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC-------EEEEEeCCH--HHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHH
Confidence 346899999999999999999999887 899999864 2222111100000000011222222222222
Q ss_pred ---CCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEEcCcchhhHHHHHHHCCCC
Q 020875 80 ---TGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEFAPSI 148 (320)
Q Consensus 80 ---~~aDvVi~~ag~~~~~---~~~r---~~~~~~n~~~~~~i~~~i~~~~--~~~~~viv~snP~~~~~~~~~~~~~~~ 148 (320)
...|+|||+||..... ..+. .+.+..|+.....+.+.+..+. ....++|++|+-... .+.
T Consensus 74 ~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~---------~~~ 144 (277)
T PRK06180 74 ATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGL---------ITM 144 (277)
T ss_pred HHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEeccccc---------CCC
Confidence 3589999999874311 1222 3347788888877777754321 022467777753211 123
Q ss_pred CCCcEEEeehhhHHHHHHHHHHHc
Q 020875 149 PAKNITCLTRLDHNRALGQISEKL 172 (320)
Q Consensus 149 ~~~~i~~~t~ld~~r~~~~~a~~l 172 (320)
|..-.|+.++.-...+...+++.+
T Consensus 145 ~~~~~Y~~sK~a~~~~~~~la~e~ 168 (277)
T PRK06180 145 PGIGYYCGSKFALEGISESLAKEV 168 (277)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHh
Confidence 333356666554445555566654
No 119
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=98.39 E-value=5.9e-06 Score=73.83 Aligned_cols=157 Identities=18% Similarity=0.167 Sum_probs=89.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhh---
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA--- 78 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~a--- 78 (320)
.++|+|+||+|++|..++..|++.|. +|++.++++ ++++.....+.+.... ...++....+..++
T Consensus 10 ~k~vlItGa~g~iG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~ 80 (255)
T PRK07523 10 GRRALVTGSSQGIGYALAEGLAQAGA-------EVILNGRDP--AKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDA 80 (255)
T ss_pred CCEEEEECCcchHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHH
Confidence 46999999999999999999999887 899999864 3333333333221100 01122111122222
Q ss_pred ----cCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHHhhhcC--CCeEEEEEcCcchhhHHHHHHHCC
Q 020875 79 ----CTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASALEQHAA--PNCKVLVVANPANTNALILKEFAP 146 (320)
Q Consensus 79 ----l~~aDvVi~~ag~~~~~~---~~---r~~~~~~n~~~~~~i~~~i~~~~~--~~~~viv~snP~~~~~~~~~~~~~ 146 (320)
+...|+||+.+|...... .+ ..+.+..|+.....+.+.+.++.. ...++|++|+.... .
T Consensus 81 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~---------~ 151 (255)
T PRK07523 81 FEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSA---------L 151 (255)
T ss_pred HHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhc---------c
Confidence 345799999998753211 11 234566888777777776665421 23567777764321 1
Q ss_pred CCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 147 ~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
..+....++.++.....+-+.++..+. +..++.
T Consensus 152 ~~~~~~~y~~sK~a~~~~~~~~a~e~~--~~gi~v 184 (255)
T PRK07523 152 ARPGIAPYTATKGAVGNLTKGMATDWA--KHGLQC 184 (255)
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHhh--HhCeEE
Confidence 222222456666555556666666554 344553
No 120
>PRK08278 short chain dehydrogenase; Provisional
Probab=98.37 E-value=1.1e-05 Score=73.11 Aligned_cols=165 Identities=16% Similarity=0.146 Sum_probs=95.9
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccc-----hhHHHHHHHhcccCC---CCcceEEe
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAE-----ALNGVKMELVDAAFP---LLKGVVAT 72 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~-----~~~~~~~dl~~~~~~---~~~~v~~~ 72 (320)
|+.+.++++||||+|++|++++..|++.|. +|++++++.... .++....++...... ...++...
T Consensus 2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~-------~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~ 74 (273)
T PRK08278 2 MSLSGKTLFITGASRGIGLAIALRAARDGA-------NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDE 74 (273)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCH
Confidence 444557899999999999999999999886 899999864211 122222223211100 01222222
Q ss_pred CChhhhc-------CCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHHhhhcC--CCeEEEEEcCcchhh
Q 020875 73 TDAVEAC-------TGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHAA--PNCKVLVVANPANTN 137 (320)
Q Consensus 73 ~~~~~al-------~~aDvVi~~ag~~~~~---~~~r---~~~~~~n~~~~~~i~~~i~~~~~--~~~~viv~snP~~~~ 137 (320)
.+..+.+ ...|++|++||..... ..+. ...+..|+.....+++.+..+-. ..+.++++|.+...
T Consensus 75 ~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~- 153 (273)
T PRK08278 75 DQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNL- 153 (273)
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhc-
Confidence 2222222 3689999999874321 1222 33566777777676666654310 23567777754321
Q ss_pred HHHHHHHCCC-CCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeee
Q 020875 138 ALILKEFAPS-IPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182 (320)
Q Consensus 138 ~~~~~~~~~~-~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~ 182 (320)
.+. ++....|+.++.-...+...+++.++ +..|+..
T Consensus 154 -------~~~~~~~~~~Y~~sK~a~~~~~~~la~el~--~~~I~v~ 190 (273)
T PRK08278 154 -------DPKWFAPHTAYTMAKYGMSLCTLGLAEEFR--DDGIAVN 190 (273)
T ss_pred -------cccccCCcchhHHHHHHHHHHHHHHHHHhh--hcCcEEE
Confidence 111 13334678888877888888888876 3456643
No 121
>PRK06482 short chain dehydrogenase; Provisional
Probab=98.37 E-value=4.6e-06 Score=75.47 Aligned_cols=149 Identities=13% Similarity=0.146 Sum_probs=83.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhh-------h
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVE-------A 78 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~-------a 78 (320)
++++||||+|++|++++..|++.|. .|.+.++++ +.+................+++...+..+ .
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 73 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-------RVAATVRRP--DALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAA 73 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 5799999999999999999999886 788888763 22221111110000000112221112222 2
Q ss_pred cCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEEcCcchhhHHHHHHHCCCCCC
Q 020875 79 CTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEFAPSIPA 150 (320)
Q Consensus 79 l~~aDvVi~~ag~~~~~~---~~---r~~~~~~n~~~~~~i~~~i~~~~--~~~~~viv~snP~~~~~~~~~~~~~~~~~ 150 (320)
+.+.|+|||+||...... .+ ....+..|+.....+.+.+.++. ....++|++|+-... .+.|.
T Consensus 74 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~---------~~~~~ 144 (276)
T PRK06482 74 LGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQ---------IAYPG 144 (276)
T ss_pred cCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccc---------cCCCC
Confidence 346899999998754211 11 23456788888888888863321 022466776653211 12333
Q ss_pred CcEEEeehhhHHHHHHHHHHHc
Q 020875 151 KNITCLTRLDHNRALGQISEKL 172 (320)
Q Consensus 151 ~~i~~~t~ld~~r~~~~~a~~l 172 (320)
.-.|+.++.-...+...+++.+
T Consensus 145 ~~~Y~~sK~a~~~~~~~l~~~~ 166 (276)
T PRK06482 145 FSLYHATKWGIEGFVEAVAQEV 166 (276)
T ss_pred CchhHHHHHHHHHHHHHHHHHh
Confidence 3356776665556666666664
No 122
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=98.37 E-value=4.5e-06 Score=74.38 Aligned_cols=155 Identities=15% Similarity=0.105 Sum_probs=84.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhh-------h
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVE-------A 78 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~-------a 78 (320)
|+|.|+||+|++|.+++..|++.|. +|+++++++ +++.....++.........++....+..+ .
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~ 71 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGH-------KVIATGRRQ--ERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAE 71 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHH
Confidence 6899999999999999999999887 899999864 33332211111000000112211112222 2
Q ss_pred cCCCcEEEEeCCCCCC--C--CCCH---HHHHHhhHHHHHHHHHHHhhhcC--CCeEEEEEcCcchhhHHHHHHHCCCCC
Q 020875 79 CTGVNIAVMVGGFPRK--E--GMER---KDVMSKNVSIYKAQASALEQHAA--PNCKVLVVANPANTNALILKEFAPSIP 149 (320)
Q Consensus 79 l~~aDvVi~~ag~~~~--~--~~~r---~~~~~~n~~~~~~i~~~i~~~~~--~~~~viv~snP~~~~~~~~~~~~~~~~ 149 (320)
+.+.|+||+.+|.... + ..+. .+.+..|+.....+.+.+.++.. ....++++|+.... .+++
T Consensus 72 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~---------~~~~ 142 (248)
T PRK10538 72 WRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGS---------WPYA 142 (248)
T ss_pred cCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccC---------CCCC
Confidence 3479999999986421 1 1222 34567777765444444433220 22467777753211 1233
Q ss_pred CCcEEEeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 150 AKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 150 ~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
....++.++.-...+...+++.++ +..|+
T Consensus 143 ~~~~Y~~sK~~~~~~~~~l~~~~~--~~~i~ 171 (248)
T PRK10538 143 GGNVYGATKAFVRQFSLNLRTDLH--GTAVR 171 (248)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhc--CCCcE
Confidence 333566665555556666666654 34455
No 123
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=98.37 E-value=2.6e-06 Score=71.36 Aligned_cols=105 Identities=15% Similarity=0.162 Sum_probs=69.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcEE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDvV 85 (320)
|||+||||+|.+|+.++.++..+|+ ||..+-++++ ++... .++ .-...++...+.+.++++|-|+|
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGH-------eVTAivRn~~--K~~~~-~~~----~i~q~Difd~~~~a~~l~g~DaV 66 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGH-------EVTAIVRNAS--KLAAR-QGV----TILQKDIFDLTSLASDLAGHDAV 66 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCC-------eeEEEEeChH--hcccc-ccc----eeecccccChhhhHhhhcCCceE
Confidence 7999999999999999999999999 8888888753 33210 000 01112333334567899999999
Q ss_pred EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcC
Q 020875 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN 132 (320)
Q Consensus 86 i~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~sn 132 (320)
|.+-|.+. ++. +.+. .+....+...++..+ ..++++++.
T Consensus 67 IsA~~~~~-~~~--~~~~---~k~~~~li~~l~~ag--v~RllVVGG 105 (211)
T COG2910 67 ISAFGAGA-SDN--DELH---SKSIEALIEALKGAG--VPRLLVVGG 105 (211)
T ss_pred EEeccCCC-CCh--hHHH---HHHHHHHHHHHhhcC--CeeEEEEcC
Confidence 99877553 111 1121 234566777777765 367888764
No 124
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=98.36 E-value=1.4e-06 Score=80.33 Aligned_cols=169 Identities=15% Similarity=0.085 Sum_probs=97.2
Q ss_pred EEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhccc-C-CCCcceEEeCChhhhcC--CC
Q 020875 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-F-PLLKGVVATTDAVEACT--GV 82 (320)
Q Consensus 7 kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~-~-~~~~~v~~~~~~~~al~--~a 82 (320)
||+|+||+|++|++++..|+++|+ +|+++|+... .... ....+.... . ....++....+..++++ +.
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~-------~V~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 71 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGH-------EVVVLDNLSN-GSPE-ALKRGERITRVTFVEGDLRDRELLDRLFEEHKI 71 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCC-------eEEEEeCCCc-cchh-hhhhhccccceEEEECCCCCHHHHHHHHHhCCC
Confidence 689999999999999999999886 7888875421 1111 111111100 0 00112222223444454 68
Q ss_pred cEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHH----HHHHHCCCCCCCcEEEe
Q 020875 83 NIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSIPAKNITCL 156 (320)
Q Consensus 83 DvVi~~ag~~~~~--~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~----~~~~~~~~~~~~~i~~~ 156 (320)
|+||++||..... .....+.+..|+.....+++.+.+++ . .+++++|. ...... .+.+ .....+...++.
T Consensus 72 d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~~v~~ss-~~~~g~~~~~~~~e-~~~~~~~~~y~~ 147 (328)
T TIGR01179 72 DAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTG-V-KKFIFSSS-AAVYGEPSSIPISE-DSPLGPINPYGR 147 (328)
T ss_pred cEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcC-C-CEEEEecc-hhhcCCCCCCCccc-cCCCCCCCchHH
Confidence 9999999865321 12344567889999999999988875 2 34555553 211000 0000 001112234666
Q ss_pred ehhhHHHHHHHHHHH-cCCCCCCeeeeEEEcCC
Q 020875 157 TRLDHNRALGQISEK-LNVQVSDVKNVIIWGNH 188 (320)
Q Consensus 157 t~ld~~r~~~~~a~~-l~v~~~~v~~~~v~G~h 188 (320)
++....++...+++. .+++..-+|...++|.+
T Consensus 148 sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~ 180 (328)
T TIGR01179 148 SKLMSERILRDLSKADPGLSYVILRYFNVAGAD 180 (328)
T ss_pred HHHHHHHHHHHHHHhccCCCEEEEecCcccCCC
Confidence 666666666666666 67777777766677754
No 125
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=98.36 E-value=1.5e-05 Score=69.92 Aligned_cols=161 Identities=16% Similarity=0.151 Sum_probs=106.2
Q ss_pred CCCC-CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhc-ccCCCCcceEEeCC----
Q 020875 1 MAKE-PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD-AAFPLLKGVVATTD---- 74 (320)
Q Consensus 1 m~~~-~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~-~~~~~~~~v~~~~~---- 74 (320)
|+.- .+-+.||||++.+|.+++..|.+.|. .|+|..++. ++++..+.++.+ ...+..-+++...+
T Consensus 1 m~~~~~kv~lITGASSGiG~A~A~~l~~~G~-------~vvl~aRR~--drL~~la~~~~~~~~~~~~~DVtD~~~~~~~ 71 (246)
T COG4221 1 MTTLKGKVALITGASSGIGEATARALAEAGA-------KVVLAARRE--ERLEALADEIGAGAALALALDVTDRAAVEAA 71 (246)
T ss_pred CCCCCCcEEEEecCcchHHHHHHHHHHHCCC-------eEEEEeccH--HHHHHHHHhhccCceEEEeeccCCHHHHHHH
Confidence 4443 34578999999999999999999997 899999974 678887777764 11122334444322
Q ss_pred ---hhhhcCCCcEEEEeCCCCCCCC------CCHHHHHHhhHHHHHHH----HHHHhhhcCCCeEEEEEcCcchhhHHHH
Q 020875 75 ---AVEACTGVNIAVMVGGFPRKEG------MERKDVMSKNVSIYKAQ----ASALEQHAAPNCKVLVVANPANTNALIL 141 (320)
Q Consensus 75 ---~~~al~~aDvVi~~ag~~~~~~------~~r~~~~~~n~~~~~~i----~~~i~~~~~~~~~viv~snP~~~~~~~~ 141 (320)
..+.+...|++|+-||...... +++..+++.|++.+... ++.+.+.. .+.+|++++=...
T Consensus 72 i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~--~G~IiN~~SiAG~----- 144 (246)
T COG4221 72 IEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK--SGHIINLGSIAGR----- 144 (246)
T ss_pred HHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC--CceEEEecccccc-----
Confidence 4455668999999999754211 23556788998766555 55555543 4678888753321
Q ss_pred HHHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeeeE
Q 020875 142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVI 183 (320)
Q Consensus 142 ~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~ 183 (320)
..||-..+|+.|+--..-|...+.+.+. .+.||...
T Consensus 145 ----~~y~~~~vY~ATK~aV~~fs~~LR~e~~--g~~IRVt~ 180 (246)
T COG4221 145 ----YPYPGGAVYGATKAAVRAFSLGLRQELA--GTGIRVTV 180 (246)
T ss_pred ----ccCCCCccchhhHHHHHHHHHHHHHHhc--CCCeeEEE
Confidence 1366667999988765555555544443 46777544
No 126
>PRK06500 short chain dehydrogenase; Provisional
Probab=98.35 E-value=5.6e-06 Score=73.41 Aligned_cols=158 Identities=13% Similarity=0.123 Sum_probs=88.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCC-------hh
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTD-------AV 76 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~-------~~ 76 (320)
+.++++|+||+|++|++++..|+..|. +|+++++++ +.+.....++.........++....+ ..
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-------RVAITGRDP--ASLEAARAELGESALVIRADAGDVAAQKALAQALA 75 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEecCCH--HHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHH
Confidence 346999999999999999999999886 789998863 22322221221000000011111011 12
Q ss_pred hhcCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCC
Q 020875 77 EACTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPA 150 (320)
Q Consensus 77 ~al~~aDvVi~~ag~~~~~~---~~---r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~ 150 (320)
+.+...|+||+.+|...... .+ ....+..|+.....+.+.+.++-.....++++++.... .+.|.
T Consensus 76 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~---------~~~~~ 146 (249)
T PRK06500 76 EAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAH---------IGMPN 146 (249)
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhc---------cCCCC
Confidence 22356899999998643211 12 23467789888888888887641122455666543211 12333
Q ss_pred CcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 151 KNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 151 ~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
...|+.++.-...+-+.+++.+. +..|+.
T Consensus 147 ~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v 175 (249)
T PRK06500 147 SSVYAASKAALLSLAKTLSGELL--PRGIRV 175 (249)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhh--hcCeEE
Confidence 33456666555566666666653 345553
No 127
>PRK08265 short chain dehydrogenase; Provisional
Probab=98.35 E-value=8.5e-06 Score=73.24 Aligned_cols=160 Identities=13% Similarity=0.075 Sum_probs=89.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhh-----
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA----- 78 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a----- 78 (320)
+.++++|+||+|.+|.+++..|++.|. +|++.|++. +.++....++.........++....+..++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 75 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-------RVAIVDIDA--DNGAAVAASLGERARFIATDITDDAAIERAVATVV 75 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHH
Confidence 347999999999999999999999987 899999864 223222222211000011122222222222
Q ss_pred --cCCCcEEEEeCCCCCCC--CCC---HHHHHHhhHHHHHHHHHHHhhhc-CCCeEEEEEcCcchhhHHHHHHHCCCCCC
Q 020875 79 --CTGVNIAVMVGGFPRKE--GME---RKDVMSKNVSIYKAQASALEQHA-APNCKVLVVANPANTNALILKEFAPSIPA 150 (320)
Q Consensus 79 --l~~aDvVi~~ag~~~~~--~~~---r~~~~~~n~~~~~~i~~~i~~~~-~~~~~viv~snP~~~~~~~~~~~~~~~~~ 150 (320)
+...|++|+.||..... ..+ ..+.+..|+.....+.+.+...- .+...+|++|+-... .+.+.
T Consensus 76 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~---------~~~~~ 146 (261)
T PRK08265 76 ARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAK---------FAQTG 146 (261)
T ss_pred HHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhc---------cCCCC
Confidence 34679999999864321 122 23456667776666665544321 134567777653211 12222
Q ss_pred CcEEEeehhhHHHHHHHHHHHcCCCCCCeeeeE
Q 020875 151 KNITCLTRLDHNRALGQISEKLNVQVSDVKNVI 183 (320)
Q Consensus 151 ~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~ 183 (320)
.-.|+.++.-...+.+.++..+. +..|+...
T Consensus 147 ~~~Y~asKaa~~~~~~~la~e~~--~~gi~vn~ 177 (261)
T PRK08265 147 RWLYPASKAAIRQLTRSMAMDLA--PDGIRVNS 177 (261)
T ss_pred CchhHHHHHHHHHHHHHHHHHhc--ccCEEEEE
Confidence 22566666656667777777764 45676443
No 128
>PLN02253 xanthoxin dehydrogenase
Probab=98.34 E-value=7.5e-06 Score=74.23 Aligned_cols=152 Identities=15% Similarity=0.089 Sum_probs=89.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhccc-C-CCCcceEEeCChhhhc---
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-F-PLLKGVVATTDAVEAC--- 79 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~-~-~~~~~v~~~~~~~~al--- 79 (320)
.++++||||+|.+|++++..|++.|. +|+++|++. +..+....++.... . ....++....+..+++
T Consensus 18 ~k~~lItGas~gIG~~la~~l~~~G~-------~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 88 (280)
T PLN02253 18 GKVALVTGGATGIGESIVRLFHKHGA-------KVCIVDLQD--DLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFT 88 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHH
Confidence 46899999999999999999999887 899999863 22222222232110 0 0112222222233333
Q ss_pred ----CCCcEEEEeCCCCCCC-----CCC---HHHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEEcCcchhhHHHHHHHC
Q 020875 80 ----TGVNIAVMVGGFPRKE-----GME---RKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEFA 145 (320)
Q Consensus 80 ----~~aDvVi~~ag~~~~~-----~~~---r~~~~~~n~~~~~~i~~~i~~~~--~~~~~viv~snP~~~~~~~~~~~~ 145 (320)
...|++||.||..... ..+ ....+..|+.....+.+.+.+.- ...+.++++++....
T Consensus 89 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~--------- 159 (280)
T PLN02253 89 VDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASA--------- 159 (280)
T ss_pred HHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhc---------
Confidence 3689999999875321 111 23467788777766666554321 123567777654321
Q ss_pred CCCCCCcEEEeehhhHHHHHHHHHHHcCC
Q 020875 146 PSIPAKNITCLTRLDHNRALGQISEKLNV 174 (320)
Q Consensus 146 ~~~~~~~i~~~t~ld~~r~~~~~a~~l~v 174 (320)
.+.+....|+.++.-...+-+.+++.++-
T Consensus 160 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~ 188 (280)
T PLN02253 160 IGGLGPHAYTGSKHAVLGLTRSVAAELGK 188 (280)
T ss_pred ccCCCCcccHHHHHHHHHHHHHHHHHhhh
Confidence 12222235788877777888888888764
No 129
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.34 E-value=3.4e-06 Score=74.37 Aligned_cols=160 Identities=18% Similarity=0.141 Sum_probs=87.4
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCC---CcceEEeCChhh
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVE 77 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~---~~~v~~~~~~~~ 77 (320)
|.+++++|+|+||+|++|.+++..|+++|+ +|.++++++ ++......++....... ..++....+..+
T Consensus 1 ~~~~~~~ilItGasg~iG~~l~~~l~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 71 (246)
T PRK05653 1 MSLQGKTALVTGASRGIGRAIALRLAADGA-------KVVIYDSNE--EAAEALAAELRAAGGEARVLVFDVSDEAAVRA 71 (246)
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCh--hHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence 666667999999999999999999999887 789999864 23332222332111000 012211112222
Q ss_pred h-------cCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEEcCcchhhHHHHH
Q 020875 78 A-------CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILK 142 (320)
Q Consensus 78 a-------l~~aDvVi~~ag~~~~~---~~~r---~~~~~~n~~~~~~i~~~i~~~~--~~~~~viv~snP~~~~~~~~~ 142 (320)
+ +...|+||+++|..... ..+. .+.+..|+.....+.+.+.++- ....++|++|.-...
T Consensus 72 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~------ 145 (246)
T PRK05653 72 LIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGV------ 145 (246)
T ss_pred HHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhc------
Confidence 2 34569999998763221 1122 3356677777777776664321 022456666642211
Q ss_pred HHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 143 ~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
.+.++..-++.++.....+...+++.+. +.+++
T Consensus 146 ---~~~~~~~~y~~sk~~~~~~~~~l~~~~~--~~~i~ 178 (246)
T PRK05653 146 ---TGNPGQTNYSAAKAGVIGFTKALALELA--SRGIT 178 (246)
T ss_pred ---cCCCCCcHhHhHHHHHHHHHHHHHHHHh--hcCeE
Confidence 1222222345555544556566666543 33454
No 130
>PRK12937 short chain dehydrogenase; Provisional
Probab=98.32 E-value=9e-06 Score=71.91 Aligned_cols=162 Identities=12% Similarity=0.111 Sum_probs=90.9
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhh
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE 77 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~ 77 (320)
|..+.++|+||||+|.+|++++..|+++|+ +++++.++. .........++...... ...++....+..+
T Consensus 1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~-------~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~ 72 (245)
T PRK12937 1 MTLSNKVAIVTGASRGIGAAIARRLAADGF-------AVAVNYAGS-AAAADELVAEIEAAGGRAIAVQADVADAAAVTR 72 (245)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEecCCC-HHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence 666678999999999999999999999987 677776542 12222222222211100 0112222222333
Q ss_pred hc-------CCCcEEEEeCCCCCCCC---C---CHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHH
Q 020875 78 AC-------TGVNIAVMVGGFPRKEG---M---ERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEF 144 (320)
Q Consensus 78 al-------~~aDvVi~~ag~~~~~~---~---~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~ 144 (320)
++ .+.|+||+.||...... . .....+..|+.....+++.+.+...+..+++++|.....
T Consensus 73 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~-------- 144 (245)
T PRK12937 73 LFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIA-------- 144 (245)
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeecccc--------
Confidence 33 36899999998743111 1 123456788777777776665543234567777643211
Q ss_pred CCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 145 ~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
...|....|+.++.-...+-..+++.++ +..++.
T Consensus 145 -~~~~~~~~Y~~sK~a~~~~~~~~a~~~~--~~~i~v 178 (245)
T PRK12937 145 -LPLPGYGPYAASKAAVEGLVHVLANELR--GRGITV 178 (245)
T ss_pred -CCCCCCchhHHHHHHHHHHHHHHHHHhh--hcCeEE
Confidence 1233333566666555555566666654 334553
No 131
>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]
Probab=98.32 E-value=4.6e-06 Score=76.40 Aligned_cols=145 Identities=19% Similarity=0.210 Sum_probs=92.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCcc-chhHHHHHH-Hhccc-----CC-----CCcceEEe
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA-EALNGVKME-LVDAA-----FP-----LLKGVVAT 72 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~-~~~~~~~~d-l~~~~-----~~-----~~~~v~~~ 72 (320)
.+||+|+| +|.+|+.+|..++..|+ +|+++|++++. ++....... +.... .. ....++.+
T Consensus 3 i~kv~ViG-aG~MG~gIA~~~A~~G~-------~V~l~D~~~~~~~~~~~~i~~~l~k~~~~g~l~~~~~~~~l~~i~~~ 74 (307)
T COG1250 3 IKKVAVIG-AGVMGAGIAAVFALAGY-------DVVLKDISPEALERALAYIEKNLEKLVEKGKLTEEEADAALARITPT 74 (307)
T ss_pred ccEEEEEc-ccchhHHHHHHHhhcCC-------ceEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHhhcccc
Confidence 36999999 59999999999999776 89999997421 111111111 11111 00 12455655
Q ss_pred CChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchh-hHHHHHHHCCCC---
Q 020875 73 TDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT-NALILKEFAPSI--- 148 (320)
Q Consensus 73 ~~~~~al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~-~~~~~~~~~~~~--- 148 (320)
+++ .++++||+||-++ -+|.+.-+++.+.+.++++|++ |++||.+.+ ++.+... ...
T Consensus 75 ~~~-~~l~~~DlVIEAv--------------~E~levK~~vf~~l~~~~~~~a--IlASNTSsl~it~ia~~--~~rper 135 (307)
T COG1250 75 TDL-AALKDADLVIEAV--------------VEDLELKKQVFAELEALAKPDA--ILASNTSSLSITELAEA--LKRPER 135 (307)
T ss_pred Cch-hHhccCCEEEEec--------------cccHHHHHHHHHHHHhhcCCCc--EEeeccCCCCHHHHHHH--hCCchh
Confidence 554 4899999999874 2345677899999999987775 688887765 3343332 122
Q ss_pred --------CCC--c---EE--EeehhhHHHHHHHHHHHcCCCC
Q 020875 149 --------PAK--N---IT--CLTRLDHNRALGQISEKLNVQV 176 (320)
Q Consensus 149 --------~~~--~---i~--~~t~ld~~r~~~~~a~~l~v~~ 176 (320)
|+. + ++ -.|.-++......++++++-.|
T Consensus 136 ~iG~HFfNP~~~m~LVEvI~g~~T~~e~~~~~~~~~~~igK~~ 178 (307)
T COG1250 136 FIGLHFFNPVPLMPLVEVIRGEKTSDETVERVVEFAKKIGKTP 178 (307)
T ss_pred EEEEeccCCCCcceeEEEecCCCCCHHHHHHHHHHHHHcCCCC
Confidence 222 1 22 2356677777778888888543
No 132
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=98.32 E-value=8.1e-06 Score=73.26 Aligned_cols=171 Identities=17% Similarity=0.163 Sum_probs=104.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC-C---CCcceEEeCChhh-
Q 020875 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-P---LLKGVVATTDAVE- 77 (320)
Q Consensus 3 ~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~-~---~~~~v~~~~~~~~- 77 (320)
+++++++||||++.||..++..|+.+|+ .++|+.|++ ++++....++.+... . ...|+....+...
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-------~liLvaR~~--~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l 74 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-------NLILVARRE--DKLEALAKELEDKTGVEVEVIPADLSDPEALERL 74 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCcH--HHHHHHHHHHHHhhCceEEEEECcCCChhHHHHH
Confidence 3457999999999999999999999998 899999974 788888888876431 1 1123332222222
Q ss_pred --h----cCCCcEEEEeCCCCCCC------CCCHHHHHHhhHHH----HHHHHHHHhhhcCCCeEEEEEcCcchhhHHHH
Q 020875 78 --A----CTGVNIAVMVGGFPRKE------GMERKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALIL 141 (320)
Q Consensus 78 --a----l~~aDvVi~~ag~~~~~------~~~r~~~~~~n~~~----~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~ 141 (320)
. ....|+.|..||+.... ..+..+++..|+.. ++.+++.+.+.+ .+.+|++++-...+
T Consensus 75 ~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~--~G~IiNI~S~ag~~---- 148 (265)
T COG0300 75 EDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG--AGHIINIGSAAGLI---- 148 (265)
T ss_pred HHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CceEEEEechhhcC----
Confidence 1 22589999999985421 12344677777654 455566666653 35688887543211
Q ss_pred HHHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeeeEEEcCCCCccccccc
Q 020875 142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVN 197 (320)
Q Consensus 142 ~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~hg~~~~~~~S 197 (320)
+ -|..-+|+.|+---.-|-..+...| ....|+...| . .|.+.-..|.
T Consensus 149 ----p-~p~~avY~ATKa~v~~fSeaL~~EL--~~~gV~V~~v-~-PG~~~T~f~~ 195 (265)
T COG0300 149 ----P-TPYMAVYSATKAFVLSFSEALREEL--KGTGVKVTAV-C-PGPTRTEFFD 195 (265)
T ss_pred ----C-CcchHHHHHHHHHHHHHHHHHHHHh--cCCCeEEEEE-e-cCcccccccc
Confidence 1 1322356666554444544555554 5566765432 3 4554444553
No 133
>PRK12746 short chain dehydrogenase; Provisional
Probab=98.31 E-value=2.1e-05 Score=70.07 Aligned_cols=155 Identities=14% Similarity=0.108 Sum_probs=87.1
Q ss_pred CCC-CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEE-ecCCccchhHHHHHHHhcccCC---CCcceEEeCCh
Q 020875 1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHML-DIPPAAEALNGVKMELVDAAFP---LLKGVVATTDA 75 (320)
Q Consensus 1 m~~-~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~-D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~ 75 (320)
|++ +.++|+|+||+|++|++++..|+++|. ++.+. .++. +++.....++...... ...++....+.
T Consensus 1 ~~~~~~~~ilItGasg~iG~~la~~l~~~G~-------~v~i~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i 71 (254)
T PRK12746 1 MKNLDGKVALVTGASRGIGRAIAMRLANDGA-------LVAIHYGRNK--QAADETIREIESNGGKAFLIEADLNSIDGV 71 (254)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEcCCCH--HHHHHHHHHHHhcCCcEEEEEcCcCCHHHH
Confidence 554 247999999999999999999999886 66654 4432 3332222223211100 11223222222
Q ss_pred hhhcC-------------CCcEEEEeCCCCCCCC---CCH---HHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchh
Q 020875 76 VEACT-------------GVNIAVMVGGFPRKEG---MER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136 (320)
Q Consensus 76 ~~al~-------------~aDvVi~~ag~~~~~~---~~r---~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~ 136 (320)
.++++ +.|+|||++|...... .+. ...+..|+.....+.+.+.++......++++|.....
T Consensus 72 ~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~ 151 (254)
T PRK12746 72 KKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVR 151 (254)
T ss_pred HHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhc
Confidence 22222 5899999998753211 121 3356688888888888777653223456666654211
Q ss_pred hHHHHHHHCCCCCCCcEEEeehhhHHHHHHHHHHHcC
Q 020875 137 NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (320)
Q Consensus 137 ~~~~~~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~ 173 (320)
.+.+..-.|+.++.-...+-..+++.++
T Consensus 152 ---------~~~~~~~~Y~~sK~a~~~~~~~~~~~~~ 179 (254)
T PRK12746 152 ---------LGFTGSIAYGLSKGALNTMTLPLAKHLG 179 (254)
T ss_pred ---------CCCCCCcchHhhHHHHHHHHHHHHHHHh
Confidence 1223223466666655566666766654
No 134
>PLN02996 fatty acyl-CoA reductase
Probab=98.31 E-value=5.8e-06 Score=81.34 Aligned_cols=121 Identities=17% Similarity=0.066 Sum_probs=71.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHH-HHHHhcc---------------------c
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGV-KMELVDA---------------------A 62 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~-~~dl~~~---------------------~ 62 (320)
.++|.||||+||+|++++..|+..+.- ..+|.++.+....+..... ..++.+. .
T Consensus 11 ~k~VlvTGaTGFlG~~ll~~LL~~~~~----v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv 86 (491)
T PLN02996 11 NKTILVTGATGFLAKIFVEKILRVQPN----VKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKV 86 (491)
T ss_pred CCeEEEeCCCcHHHHHHHHHHHhhCCC----CCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCE
Confidence 468999999999999999988864320 1267766664322111100 0011100 0
Q ss_pred CCCCcceEE-------eCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEc
Q 020875 63 FPLLKGVVA-------TTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA 131 (320)
Q Consensus 63 ~~~~~~v~~-------~~~~~~al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~s 131 (320)
....+++.. .....+.++++|+|||+|+... ...+..+....|+..+.++++.+++.... .+++.+|
T Consensus 87 ~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~-k~~V~vS 160 (491)
T PLN02996 87 TPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTN-FDERYDVALGINTLGALNVLNFAKKCVKV-KMLLHVS 160 (491)
T ss_pred EEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccC-CcCCHHHHHHHHHHHHHHHHHHHHhcCCC-CeEEEEe
Confidence 001122221 1112355678999999998654 23455667889999999999999875312 2455554
No 135
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.31 E-value=8.3e-06 Score=72.53 Aligned_cols=161 Identities=14% Similarity=0.056 Sum_probs=89.9
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcC
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT 80 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~ 80 (320)
|..+.++|+||||+|++|++++..|++.|. +|++.+.+. .++++....++.........++....+..++++
T Consensus 1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~-------~vv~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 72 (253)
T PRK08642 1 MQISEQTVLVTGGSRGLGAAIARAFAREGA-------RVVVNYHQS-EDAAEALADELGDRAIALQADVTDREQVQAMFA 72 (253)
T ss_pred CCCCCCEEEEeCCCCcHHHHHHHHHHHCCC-------eEEEEcCCC-HHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHH
Confidence 666667999999999999999999999886 677665432 122221111111000000112221122222232
Q ss_pred -------C-CcEEEEeCCCCC-------CC--CCC---HHHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEEcCcchhhH
Q 020875 81 -------G-VNIAVMVGGFPR-------KE--GME---RKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNA 138 (320)
Q Consensus 81 -------~-aDvVi~~ag~~~-------~~--~~~---r~~~~~~n~~~~~~i~~~i~~~~--~~~~~viv~snP~~~~~ 138 (320)
. .|++|+.||... .+ ..+ ..+.+..|+.....+.+.+..+- ...+.++++++....
T Consensus 73 ~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-- 150 (253)
T PRK08642 73 TATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQ-- 150 (253)
T ss_pred HHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCcccc--
Confidence 2 899999997521 00 112 22356777776666666654321 123567777754311
Q ss_pred HHHHHHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 139 LILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 139 ~~~~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
...++...|+.++.....+.+.+|+.++- ..|+
T Consensus 151 -------~~~~~~~~Y~~sK~a~~~l~~~la~~~~~--~~i~ 183 (253)
T PRK08642 151 -------NPVVPYHDYTTAKAALLGLTRNLAAELGP--YGIT 183 (253)
T ss_pred -------CCCCCccchHHHHHHHHHHHHHHHHHhCc--cCeE
Confidence 11222236788888788888888887763 4555
No 136
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=98.31 E-value=3.8e-06 Score=75.47 Aligned_cols=155 Identities=19% Similarity=0.129 Sum_probs=87.3
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhh--
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA-- 78 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a-- 78 (320)
|+.+.+++.||||+|.+|++++..|++.|. +|++.++++ +.++.......+.......++....+..++
T Consensus 1 m~~~~k~vlItGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~ 71 (262)
T TIGR03325 1 MRLKGEVVLVTGGASGLGRAIVDRFVAEGA-------RVAVLDKSA--AGLQELEAAHGDAVVGVEGDVRSLDDHKEAVA 71 (262)
T ss_pred CCcCCcEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHhhcCCceEEEEeccCCHHHHHHHHH
Confidence 766678999999999999999999999987 899999863 223221111100000011122211122222
Q ss_pred -----cCCCcEEEEeCCCCCC--C--CC-------CHHHHHHhhHHHHHHHHHHHhhhc-CCCeEEEEEcCcchhhHHHH
Q 020875 79 -----CTGVNIAVMVGGFPRK--E--GM-------ERKDVMSKNVSIYKAQASALEQHA-APNCKVLVVANPANTNALIL 141 (320)
Q Consensus 79 -----l~~aDvVi~~ag~~~~--~--~~-------~r~~~~~~n~~~~~~i~~~i~~~~-~~~~~viv~snP~~~~~~~~ 141 (320)
+...|++|+.||.... + .. ...+.+..|+.....+++.+.+.- ..+..+|++++....
T Consensus 72 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~----- 146 (262)
T TIGR03325 72 RCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGF----- 146 (262)
T ss_pred HHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEecccee-----
Confidence 3467999999986321 1 11 123456677776666666665431 112445555432211
Q ss_pred HHHCCCCCCCcEEEeehhhHHHHHHHHHHHcC
Q 020875 142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (320)
Q Consensus 142 ~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~ 173 (320)
...+..-.|+.++.-...+-+.+|+.++
T Consensus 147 ----~~~~~~~~Y~~sKaa~~~l~~~la~e~~ 174 (262)
T TIGR03325 147 ----YPNGGGPLYTAAKHAVVGLVKELAFELA 174 (262)
T ss_pred ----cCCCCCchhHHHHHHHHHHHHHHHHhhc
Confidence 0112122567777767777788888876
No 137
>PRK07856 short chain dehydrogenase; Provisional
Probab=98.30 E-value=6.3e-06 Score=73.54 Aligned_cols=150 Identities=11% Similarity=0.035 Sum_probs=87.8
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhc-
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC- 79 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al- 79 (320)
|..+.++++||||+|.+|.+++..|+..|. +|++++++... ...+ ........++....+..+.+
T Consensus 2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~-------~v~~~~r~~~~-~~~~------~~~~~~~~D~~~~~~~~~~~~ 67 (252)
T PRK07856 2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGA-------TVVVCGRRAPE-TVDG------RPAEFHAADVRDPDQVAALVD 67 (252)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCChhh-hhcC------CceEEEEccCCCHHHHHHHHH
Confidence 555668999999999999999999999886 79999986421 0000 00000011111111222222
Q ss_pred ------CCCcEEEEeCCCCCCCC---C---CHHHHHHhhHHHHHHHHHHHhhhc---CCCeEEEEEcCcchhhHHHHHHH
Q 020875 80 ------TGVNIAVMVGGFPRKEG---M---ERKDVMSKNVSIYKAQASALEQHA---APNCKVLVVANPANTNALILKEF 144 (320)
Q Consensus 80 ------~~aDvVi~~ag~~~~~~---~---~r~~~~~~n~~~~~~i~~~i~~~~---~~~~~viv~snP~~~~~~~~~~~ 144 (320)
...|+||+.||...... . .....+..|+.....+.+.+.++- ....++|++|+-...
T Consensus 68 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~-------- 139 (252)
T PRK07856 68 AIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGR-------- 139 (252)
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccC--------
Confidence 45699999998642111 1 123466788887777777665421 023567777753211
Q ss_pred CCCCCCCcEEEeehhhHHHHHHHHHHHcC
Q 020875 145 APSIPAKNITCLTRLDHNRALGQISEKLN 173 (320)
Q Consensus 145 ~~~~~~~~i~~~t~ld~~r~~~~~a~~l~ 173 (320)
.+.+..-.|+.++.-...+...++..++
T Consensus 140 -~~~~~~~~Y~~sK~a~~~l~~~la~e~~ 167 (252)
T PRK07856 140 -RPSPGTAAYGAAKAGLLNLTRSLAVEWA 167 (252)
T ss_pred -CCCCCCchhHHHHHHHHHHHHHHHHHhc
Confidence 1223223567776666677777888776
No 138
>PRK07478 short chain dehydrogenase; Provisional
Probab=98.30 E-value=2e-05 Score=70.34 Aligned_cols=161 Identities=15% Similarity=0.137 Sum_probs=93.0
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhh
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE 77 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~ 77 (320)
|..+.++++||||+|.+|.+++..|++.|. +|++.++++ +++.....++.+.... ...++....+..+
T Consensus 2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 72 (254)
T PRK07478 2 MRLNGKVAIITGASSGIGRAAAKLFAREGA-------KVVVGARRQ--AELDQLVAEIRAEGGEAVALAGDVRDEAYAKA 72 (254)
T ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Confidence 444557899999999999999999999887 799999864 3444333344322110 0112222112222
Q ss_pred h-------cCCCcEEEEeCCCCC--CC--CCC---HHHHHHhhHHHH----HHHHHHHhhhcCCCeEEEEEcCcchhhHH
Q 020875 78 A-------CTGVNIAVMVGGFPR--KE--GME---RKDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNAL 139 (320)
Q Consensus 78 a-------l~~aDvVi~~ag~~~--~~--~~~---r~~~~~~n~~~~----~~i~~~i~~~~~~~~~viv~snP~~~~~~ 139 (320)
. +...|++|+.||... .+ ..+ ....+..|+... +.+.+.+++.. ..++|++|+....
T Consensus 73 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~--~~~iv~~sS~~~~--- 147 (254)
T PRK07478 73 LVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG--GGSLIFTSTFVGH--- 147 (254)
T ss_pred HHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CceEEEEechHhh---
Confidence 2 236899999998632 11 112 234567777544 44455555442 3567777653211
Q ss_pred HHHHHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeee
Q 020875 140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182 (320)
Q Consensus 140 ~~~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~ 182 (320)
..+.+..-.|+.++.-...+-..+++.++ +..|+..
T Consensus 148 -----~~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~ 183 (254)
T PRK07478 148 -----TAGFPGMAAYAASKAGLIGLTQVLAAEYG--AQGIRVN 183 (254)
T ss_pred -----ccCCCCcchhHHHHHHHHHHHHHHHHHHh--hcCEEEE
Confidence 01233333577777767777777888765 3455543
No 139
>PRK06138 short chain dehydrogenase; Provisional
Probab=98.30 E-value=4.1e-06 Score=74.42 Aligned_cols=152 Identities=16% Similarity=0.085 Sum_probs=85.4
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhh
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE 77 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~ 77 (320)
|..+.++++|+||+|++|++++..|++.|. +|++++++. +.+.....++. .... ...++....+..+
T Consensus 1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~ 70 (252)
T PRK06138 1 MRLAGRVAIVTGAGSGIGRATAKLFAREGA-------RVVVADRDA--EAAERVAAAIA-AGGRAFARQGDVGSAEAVEA 70 (252)
T ss_pred CCCCCcEEEEeCCCchHHHHHHHHHHHCCC-------eEEEecCCH--HHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHH
Confidence 666677999999999999999999999886 789998864 22332222222 1000 0112221112222
Q ss_pred h-------cCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHH----HhhhcCCCeEEEEEcCcchhhHHH
Q 020875 78 A-------CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASA----LEQHAAPNCKVLVVANPANTNALI 140 (320)
Q Consensus 78 a-------l~~aDvVi~~ag~~~~~---~~~r---~~~~~~n~~~~~~i~~~----i~~~~~~~~~viv~snP~~~~~~~ 140 (320)
+ +.+.|+|||++|..... ..+. .+.+..|+.....+.+. +++.. ..+++++|+-...
T Consensus 71 ~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~ii~~sS~~~~---- 144 (252)
T PRK06138 71 LVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG--GGSIVNTASQLAL---- 144 (252)
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC--CeEEEEECChhhc----
Confidence 2 24789999999874321 1122 23466777666544444 44432 3456666643211
Q ss_pred HHHHCCCCCCCcEEEeehhhHHHHHHHHHHHcC
Q 020875 141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (320)
Q Consensus 141 ~~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~ 173 (320)
.+.+....++.++.-...+...+++.+.
T Consensus 145 -----~~~~~~~~Y~~sK~a~~~~~~~l~~~~~ 172 (252)
T PRK06138 145 -----AGGRGRAAYVASKGAIASLTRAMALDHA 172 (252)
T ss_pred -----cCCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 1222223456666555566666776653
No 140
>PRK07326 short chain dehydrogenase; Provisional
Probab=98.29 E-value=8.6e-06 Score=71.73 Aligned_cols=122 Identities=15% Similarity=0.144 Sum_probs=70.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC--CCCcceEEeCChhhh--
Q 020875 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF--PLLKGVVATTDAVEA-- 78 (320)
Q Consensus 3 ~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~--~~~~~v~~~~~~~~a-- 78 (320)
...++|+|+||+|++|++++..|+..|. +|+++++++ +++.....++.+... ....++....++.+.
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~ 74 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGY-------KVAITARDQ--KELEEAAAELNNKGNVLGLAADVRDEADVQRAVD 74 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCC-------EEEEeeCCH--HHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHH
Confidence 3447899999999999999999998886 799999864 333322233322100 001122111122222
Q ss_pred -----cCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHHhhhc-CCCeEEEEEcCc
Q 020875 79 -----CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHA-APNCKVLVVANP 133 (320)
Q Consensus 79 -----l~~aDvVi~~ag~~~~~---~~~r---~~~~~~n~~~~~~i~~~i~~~~-~~~~~viv~snP 133 (320)
+..+|+||+++|..... ..+. .+.+..|+.....+.+.+.+.. .....+|++|+.
T Consensus 75 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~ 141 (237)
T PRK07326 75 AIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSL 141 (237)
T ss_pred HHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECCh
Confidence 34789999999864321 1122 2456677776666666654431 123456666654
No 141
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=98.27 E-value=8.4e-06 Score=73.02 Aligned_cols=155 Identities=11% Similarity=0.081 Sum_probs=85.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhhc-
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEAC- 79 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~al- 79 (320)
+.++|+|+||+|.+|.+++..|++.|. .|+++++++..+.+. ..+.+.... ...++....+..+.+
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-------~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~i~~~~~ 83 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-------DIIITTHGTNWDETR---RLIEKEGRKVTFVQVDLTKPESAEKVVK 83 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCcHHHHHH---HHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence 347899999999999999999999887 788888763212221 122211100 111222222222222
Q ss_pred ------CCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHH----HhhhcCCCeEEEEEcCcchhhHHHHHH
Q 020875 80 ------TGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASA----LEQHAAPNCKVLVVANPANTNALILKE 143 (320)
Q Consensus 80 ------~~aDvVi~~ag~~~~~---~~~---r~~~~~~n~~~~~~i~~~----i~~~~~~~~~viv~snP~~~~~~~~~~ 143 (320)
...|++|+++|..... ..+ ..+.+..|+.....+.+. +++.. ...+|++|+....
T Consensus 84 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~------- 154 (258)
T PRK06935 84 EALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG--SGKIINIASMLSF------- 154 (258)
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC--CeEEEEECCHHhc-------
Confidence 3679999999874321 111 234456676665444444 44332 3567777754311
Q ss_pred HCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 144 ~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
.+.+..-.|+.++.....+-+.+++.++ +..|+.
T Consensus 155 --~~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~v 188 (258)
T PRK06935 155 --QGGKFVPAYTASKHGVAGLTKAFANELA--AYNIQV 188 (258)
T ss_pred --cCCCCchhhHHHHHHHHHHHHHHHHHhh--hhCeEE
Confidence 1112112456666666667777777765 445653
No 142
>PLN02353 probable UDP-glucose 6-dehydrogenase
Probab=98.27 E-value=1.5e-05 Score=77.67 Aligned_cols=124 Identities=16% Similarity=0.197 Sum_probs=76.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC----C-----CcceEEeCCh
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP----L-----LKGVVATTDA 75 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~----~-----~~~v~~~~~~ 75 (320)
+|||+|+| +|+||..++..|++.|+- .+|+.+|+++ ++++...........+ + ...++.+++.
T Consensus 1 ~m~I~ViG-~GyvGl~~A~~lA~~g~g-----~~V~gvD~~~--~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~ 72 (473)
T PLN02353 1 MVKICCIG-AGYVGGPTMAVIALKCPD-----IEVVVVDISV--PRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDV 72 (473)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhcCCC-----CeEEEEECCH--HHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCH
Confidence 58999999 699999999999987531 1799999874 4443221111000000 0 1247888888
Q ss_pred hhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEE-cCcchhh
Q 020875 76 VEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVV-ANPANTN 137 (320)
Q Consensus 76 ~~al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~-snP~~~~ 137 (320)
.+++++||++|++.+.|........+ -..+...+...++.|.++.+++..+|+= |-|.++.
T Consensus 73 ~~~i~~advi~I~V~TP~~~~g~~~~-~~~Dls~v~~a~~~i~~~l~~~~lVv~~STvp~Gtt 134 (473)
T PLN02353 73 EKHVAEADIVFVSVNTPTKTRGLGAG-KAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTA 134 (473)
T ss_pred HHHHhcCCEEEEEeCCCCCCCCCcCC-CCCcHHHHHHHHHHHHhhCCCCcEEEEeCCCCCChH
Confidence 88999999999999988743210000 0123345666777777765333333333 4577653
No 143
>PRK08267 short chain dehydrogenase; Provisional
Probab=98.27 E-value=9.3e-06 Score=72.74 Aligned_cols=159 Identities=16% Similarity=0.119 Sum_probs=86.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC-CCcceEEeCChhhh------
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVATTDAVEA------ 78 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~-~~~~v~~~~~~~~a------ 78 (320)
++++|+||+|++|++++..|++.|. +|++++++. +.++....++...... ...++....+..++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 72 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-------RVGAYDINE--AGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAA 72 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 4799999999999999999999886 799999864 3333222222111100 01122221222222
Q ss_pred --cCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEEcCcchhhHHHHHHHCCCC
Q 020875 79 --CTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEFAPSI 148 (320)
Q Consensus 79 --l~~aDvVi~~ag~~~~~~---~~---r~~~~~~n~~~~~~i~~~i~~~~--~~~~~viv~snP~~~~~~~~~~~~~~~ 148 (320)
....|+||++||...... .+ ....+..|+.....+.+.+..+- .+...++++|..... .+.
T Consensus 73 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~---------~~~ 143 (260)
T PRK08267 73 ATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAI---------YGQ 143 (260)
T ss_pred HcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhC---------cCC
Confidence 235699999998754211 11 34467788887777766654321 133567777754321 111
Q ss_pred CCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeeeEE
Q 020875 149 PAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVII 184 (320)
Q Consensus 149 ~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v 184 (320)
+..-.|+.++.....+...++..+. +..++...|
T Consensus 144 ~~~~~Y~~sKaa~~~~~~~l~~~~~--~~~i~v~~i 177 (260)
T PRK08267 144 PGLAVYSATKFAVRGLTEALDLEWR--RHGIRVADV 177 (260)
T ss_pred CCchhhHHHHHHHHHHHHHHHHHhc--ccCcEEEEE
Confidence 1111345555444455555665543 345664443
No 144
>PRK06172 short chain dehydrogenase; Provisional
Probab=98.27 E-value=1.5e-05 Score=71.12 Aligned_cols=157 Identities=14% Similarity=0.045 Sum_probs=88.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhhc-
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEAC- 79 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~al- 79 (320)
+.++|+|+||+|.+|++++..|++.|. +|+++++++ +.+.....++...... ...++....+..+.+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~ 76 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-------KVVVADRDA--AGGEETVALIREAGGEALFVACDVTRDAEVKALVE 76 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence 457999999999999999999999886 899999864 3333333333321110 011222111222222
Q ss_pred ------CCCcEEEEeCCCCCCC----CCCH---HHHHHhhHHHHHHHHHH----HhhhcCCCeEEEEEcCcchhhHHHHH
Q 020875 80 ------TGVNIAVMVGGFPRKE----GMER---KDVMSKNVSIYKAQASA----LEQHAAPNCKVLVVANPANTNALILK 142 (320)
Q Consensus 80 ------~~aDvVi~~ag~~~~~----~~~r---~~~~~~n~~~~~~i~~~----i~~~~~~~~~viv~snP~~~~~~~~~ 142 (320)
...|+||+.+|..... ..+. .+.+..|+.....+.+. +.+. ....++++|+....
T Consensus 77 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~ii~~sS~~~~------ 148 (253)
T PRK06172 77 QTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQ--GGGAIVNTASVAGL------ 148 (253)
T ss_pred HHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCcEEEEECchhhc------
Confidence 3469999999874321 1122 33566777766554443 3333 23456666653211
Q ss_pred HHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeee
Q 020875 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182 (320)
Q Consensus 143 ~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~ 182 (320)
.+.+..-.|+.++.....+-..+++.+. +.+++..
T Consensus 149 ---~~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~~i~v~ 183 (253)
T PRK06172 149 ---GAAPKMSIYAASKHAVIGLTKSAAIEYA--KKGIRVN 183 (253)
T ss_pred ---cCCCCCchhHHHHHHHHHHHHHHHHHhc--ccCeEEE
Confidence 1223223466666656667777777764 4566643
No 145
>PRK08264 short chain dehydrogenase; Validated
Probab=98.27 E-value=3e-06 Score=74.83 Aligned_cols=151 Identities=21% Similarity=0.139 Sum_probs=84.7
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhh--
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA-- 78 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a-- 78 (320)
|+.+.++|+|+||+|++|++++..|+++|.. +|++++++. +++.. ..........++....+..+.
T Consensus 2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~------~V~~~~r~~--~~~~~----~~~~~~~~~~D~~~~~~~~~~~~ 69 (238)
T PRK08264 2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAA------KVYAAARDP--ESVTD----LGPRVVPLQLDVTDPASVAAAAE 69 (238)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCcc------cEEEEecCh--hhhhh----cCCceEEEEecCCCHHHHHHHHH
Confidence 4556679999999999999999999988852 688888764 22221 000000001122111222232
Q ss_pred -cCCCcEEEEeCCCCCCC----CCC---HHHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEEcCcchhhHHHHHHHCCCC
Q 020875 79 -CTGVNIAVMVGGFPRKE----GME---RKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEFAPSI 148 (320)
Q Consensus 79 -l~~aDvVi~~ag~~~~~----~~~---r~~~~~~n~~~~~~i~~~i~~~~--~~~~~viv~snP~~~~~~~~~~~~~~~ 148 (320)
+...|+||+++|..... ..+ ..+.+..|+.....+.+.+.+.. ....+++++|+.... .+.
T Consensus 70 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~---------~~~ 140 (238)
T PRK08264 70 AASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSW---------VNF 140 (238)
T ss_pred hcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhc---------cCC
Confidence 33589999999873211 112 23346677777777777654321 123567777754321 122
Q ss_pred CCCcEEEeehhhHHHHHHHHHHHc
Q 020875 149 PAKNITCLTRLDHNRALGQISEKL 172 (320)
Q Consensus 149 ~~~~i~~~t~ld~~r~~~~~a~~l 172 (320)
+....++.++.-...+...+++.+
T Consensus 141 ~~~~~y~~sK~a~~~~~~~l~~~~ 164 (238)
T PRK08264 141 PNLGTYSASKAAAWSLTQALRAEL 164 (238)
T ss_pred CCchHhHHHHHHHHHHHHHHHHHh
Confidence 322345666555555666666665
No 146
>PRK06179 short chain dehydrogenase; Provisional
Probab=98.27 E-value=7.1e-06 Score=73.95 Aligned_cols=147 Identities=15% Similarity=0.131 Sum_probs=80.8
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhc-
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC- 79 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al- 79 (320)
|. +.++|+||||+|++|++++..|+++|. +|++.+++.+ .+.. ..+. .....++....+..+++
T Consensus 1 m~-~~~~vlVtGasg~iG~~~a~~l~~~g~-------~V~~~~r~~~--~~~~----~~~~-~~~~~D~~d~~~~~~~~~ 65 (270)
T PRK06179 1 MS-NSKVALVTGASSGIGRATAEKLARAGY-------RVFGTSRNPA--RAAP----IPGV-ELLELDVTDDASVQAAVD 65 (270)
T ss_pred CC-CCCEEEEecCCCHHHHHHHHHHHHCCC-------EEEEEeCChh--hccc----cCCC-eeEEeecCCHHHHHHHHH
Confidence 44 345899999999999999999999886 7899998642 1111 0000 00011222222233333
Q ss_pred ------CCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHH----HhhhcCCCeEEEEEcCcchhhHHHHHH
Q 020875 80 ------TGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASA----LEQHAAPNCKVLVVANPANTNALILKE 143 (320)
Q Consensus 80 ------~~aDvVi~~ag~~~~~~---~~---r~~~~~~n~~~~~~i~~~----i~~~~~~~~~viv~snP~~~~~~~~~~ 143 (320)
...|+||++||...... .+ ....+..|......+.+. +++.+ ..++|++|+....
T Consensus 66 ~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~--~~~iv~isS~~~~------- 136 (270)
T PRK06179 66 EVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG--SGRIINISSVLGF------- 136 (270)
T ss_pred HHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CceEEEECCcccc-------
Confidence 35799999999753211 11 234567777666666555 44443 3567777754321
Q ss_pred HCCCCCCCcEEEeehhhHHHHHHHHHHHcC
Q 020875 144 FAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (320)
Q Consensus 144 ~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~ 173 (320)
.+.|..-.++.++.-...+...+++.++
T Consensus 137 --~~~~~~~~Y~~sK~a~~~~~~~l~~el~ 164 (270)
T PRK06179 137 --LPAPYMALYAASKHAVEGYSESLDHEVR 164 (270)
T ss_pred --CCCCCccHHHHHHHHHHHHHHHHHHHHh
Confidence 1122222345554444445555555543
No 147
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.27 E-value=1.4e-05 Score=70.53 Aligned_cols=156 Identities=13% Similarity=0.166 Sum_probs=85.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhhc--
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEAC-- 79 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~al-- 79 (320)
.++++|+||+|++|.+++..|+.+|. +|++++++. +++.....++...... ...++....+..+++
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L~~~G~-------~Vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 77 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIALAKEGV-------NVGLLARTE--ENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQ 77 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHH
Confidence 46899999999999999999999887 799999864 3333222333211100 011221112222233
Q ss_pred -----CCCcEEEEeCCCCCCCC---CCH---HHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEEcCcchhhHHHHHHHCC
Q 020875 80 -----TGVNIAVMVGGFPRKEG---MER---KDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEFAP 146 (320)
Q Consensus 80 -----~~aDvVi~~ag~~~~~~---~~r---~~~~~~n~~~~~~i~~~i~~~~--~~~~~viv~snP~~~~~~~~~~~~~ 146 (320)
.++|+||+++|...... .+. .+.+..|+.....+.+.+..+. ....+++++|+.... .
T Consensus 78 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~---------~ 148 (239)
T PRK07666 78 LKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQ---------K 148 (239)
T ss_pred HHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhc---------c
Confidence 47999999998753211 122 3456777776666666555321 022456666654321 1
Q ss_pred CCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 147 ~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
+.+....|+.++.-...+...+++.+. +..++
T Consensus 149 ~~~~~~~Y~~sK~a~~~~~~~~a~e~~--~~gi~ 180 (239)
T PRK07666 149 GAAVTSAYSASKFGVLGLTESLMQEVR--KHNIR 180 (239)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHhh--ccCcE
Confidence 222222345554433445555665542 33454
No 148
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.26 E-value=1.3e-05 Score=73.27 Aligned_cols=105 Identities=22% Similarity=0.334 Sum_probs=67.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhH-HH--H----HHHhccc-C------CCCcceE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN-GV--K----MELVDAA-F------PLLKGVV 70 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~-~~--~----~dl~~~~-~------~~~~~v~ 70 (320)
..||+|+| +|.+|..++..++..|+ +|+++|+++ ++++ +. . ..+.+.. . .....++
T Consensus 3 ~~kI~VIG-~G~mG~~ia~~la~~g~-------~V~~~d~~~--~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~l~ 72 (282)
T PRK05808 3 IQKIGVIG-AGTMGNGIAQVCAVAGY-------DVVMVDISD--AAVDRGLATITKSLDRLVKKGKMTEADKEAALARIT 72 (282)
T ss_pred ccEEEEEc-cCHHHHHHHHHHHHCCC-------ceEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeE
Confidence 35899999 69999999999999887 799999874 3332 11 0 0111110 0 0113566
Q ss_pred EeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchh
Q 020875 71 ATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136 (320)
Q Consensus 71 ~~~~~~~al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~ 136 (320)
.+++. +++++||+||.++- .+...-+++.+.+.+++++++++ +||..++
T Consensus 73 ~~~~~-~~~~~aDlVi~av~--------------e~~~~k~~~~~~l~~~~~~~~il--~s~ts~~ 121 (282)
T PRK05808 73 GTTDL-DDLKDADLVIEAAT--------------ENMDLKKKIFAQLDEIAKPEAIL--ATNTSSL 121 (282)
T ss_pred EeCCH-HHhccCCeeeeccc--------------ccHHHHHHHHHHHHhhCCCCcEE--EECCCCC
Confidence 66665 56899999999852 11234467777788877566543 5665544
No 149
>PRK05875 short chain dehydrogenase; Provisional
Probab=98.26 E-value=1.1e-05 Score=72.82 Aligned_cols=160 Identities=13% Similarity=0.060 Sum_probs=91.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC--C---CCcceEEeCChhh
Q 020875 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF--P---LLKGVVATTDAVE 77 (320)
Q Consensus 3 ~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~--~---~~~~v~~~~~~~~ 77 (320)
.+.+++.|+||+|++|++++..|+++|+ +|+++++++ ++++....++..... . ...++....+..+
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~ 75 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAAGA-------AVMIVGRNP--DKLAAAAEEIEALKGAGAVRYEPADVTDEDQVAR 75 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHH
Confidence 3457999999999999999999999987 799999863 333333333321110 0 0112222112222
Q ss_pred hc-------CCCcEEEEeCCCCCC--C--CCC---HHHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEEcCcchhhHHHH
Q 020875 78 AC-------TGVNIAVMVGGFPRK--E--GME---RKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALIL 141 (320)
Q Consensus 78 al-------~~aDvVi~~ag~~~~--~--~~~---r~~~~~~n~~~~~~i~~~i~~~~--~~~~~viv~snP~~~~~~~~ 141 (320)
.+ ...|++|+.+|.... + ..+ ..+.+..|+.....+.+.+.+.. ....+++++|+...
T Consensus 76 ~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~------ 149 (276)
T PRK05875 76 AVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAA------ 149 (276)
T ss_pred HHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhh------
Confidence 23 368999999985421 1 112 23345667777777766554431 02356777765321
Q ss_pred HHHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeee
Q 020875 142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182 (320)
Q Consensus 142 ~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~ 182 (320)
....|..-.|+.++.....+...+++.++ +..++..
T Consensus 150 ---~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~--~~~i~v~ 185 (276)
T PRK05875 150 ---SNTHRWFGAYGVTKSAVDHLMKLAADELG--PSWVRVN 185 (276)
T ss_pred ---cCCCCCCcchHHHHHHHHHHHHHHHHHhc--ccCeEEE
Confidence 01222223567777766677777777765 3566644
No 150
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.26 E-value=1.2e-05 Score=70.92 Aligned_cols=162 Identities=16% Similarity=0.141 Sum_probs=87.1
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhh
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE 77 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~ 77 (320)
|..+.++|+|+||+|++|++++..|++.|. +|++..++.. ........++...... ...++....++.+
T Consensus 1 ~~~~~~~vlItG~sg~iG~~l~~~l~~~G~-------~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~ 72 (248)
T PRK05557 1 MSLEGKVALVTGASRGIGRAIAERLAAQGA-------NVVINYASSE-AGAEALVAEIGALGGKALAVQGDVSDAESVER 72 (248)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCch-hHHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence 666778999999999999999999999887 6766665431 1222222222211100 0112221112222
Q ss_pred h-------cCCCcEEEEeCCCCCCCC---CCH---HHHHHhhHHHHHHHHHHHhhhcC--CCeEEEEEcCcchhhHHHHH
Q 020875 78 A-------CTGVNIAVMVGGFPRKEG---MER---KDVMSKNVSIYKAQASALEQHAA--PNCKVLVVANPANTNALILK 142 (320)
Q Consensus 78 a-------l~~aDvVi~~ag~~~~~~---~~r---~~~~~~n~~~~~~i~~~i~~~~~--~~~~viv~snP~~~~~~~~~ 142 (320)
+ +.+.|+|||++|...... .+. ...+..|+.....+.+.+..+.. ...+++++|+....
T Consensus 73 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~------ 146 (248)
T PRK05557 73 AVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGL------ 146 (248)
T ss_pred HHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccC------
Confidence 2 346899999998643211 122 23456788777777777765421 22467777653211
Q ss_pred HHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 143 ~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
.+.+...-++.++.....+.+.+++.+. ...++.
T Consensus 147 ---~~~~~~~~y~~sk~a~~~~~~~~a~~~~--~~~i~~ 180 (248)
T PRK05557 147 ---MGNPGQANYAASKAGVIGFTKSLARELA--SRGITV 180 (248)
T ss_pred ---cCCCCCchhHHHHHHHHHHHHHHHHHhh--hhCeEE
Confidence 1122222344444444445555666543 334553
No 151
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.26 E-value=1.7e-05 Score=70.67 Aligned_cols=118 Identities=20% Similarity=0.202 Sum_probs=69.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhh---
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA--- 78 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~a--- 78 (320)
.++|+|+||+|++|++++..|+++|+ +|++++++. +++.....++...... ...++....+..++
T Consensus 4 ~~~vlItG~sg~iG~~la~~l~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 74 (258)
T PRK12429 4 GKVALVTGAASGIGLEIALALAKEGA-------KVVIADLND--EAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDY 74 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence 46899999999999999999999887 899999864 3333333333221100 11222222222222
Q ss_pred ----cCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHH----HHHHHHHHhhhcCCCeEEEEEcCc
Q 020875 79 ----CTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANP 133 (320)
Q Consensus 79 ----l~~aDvVi~~ag~~~~~~---~~---r~~~~~~n~~~----~~~i~~~i~~~~~~~~~viv~snP 133 (320)
+.+.|+||+++|...... .+ ..+.+..|+.. ++.+.+.+++.. ..+++++|+-
T Consensus 75 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~iv~iss~ 141 (258)
T PRK12429 75 AVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG--GGRIINMASV 141 (258)
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC--CeEEEEEcch
Confidence 246899999998643211 11 22345566665 555666666543 3466666653
No 152
>PRK12744 short chain dehydrogenase; Provisional
Probab=98.25 E-value=2.3e-05 Score=70.09 Aligned_cols=159 Identities=11% Similarity=0.058 Sum_probs=89.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCC--ccchhHHHHHHHhcccCC---CCcceEEeCChhhh
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFP---LLKGVVATTDAVEA 78 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~--~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~a 78 (320)
+.++++|+||+|++|.+++..|+..|. ++++++.+. +.+.++....++...... ...++....+..+.
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~-------~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~ 79 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGA-------KAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKL 79 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-------cEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHH
Confidence 346899999999999999999999886 656665432 112222222222211100 11222222222222
Q ss_pred -------cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEE-cCcchhhHHHHHHH
Q 020875 79 -------CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVV-ANPANTNALILKEF 144 (320)
Q Consensus 79 -------l~~aDvVi~~ag~~~~~---~~~---r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~-snP~~~~~~~~~~~ 144 (320)
+...|++|+.||..... ..+ ....+..|+.....+++.+.+.-.+...++++ |.....
T Consensus 80 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~-------- 151 (257)
T PRK12744 80 FDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGA-------- 151 (257)
T ss_pred HHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcc--------
Confidence 24689999999874311 112 23456778777766777665542123344444 332211
Q ss_pred CCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 145 ~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
..|....|+.++.....+-+.+++.++ +..|+.
T Consensus 152 --~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~~i~v 184 (257)
T PRK12744 152 --FTPFYSAYAGSKAPVEHFTRAASKEFG--ARGISV 184 (257)
T ss_pred --cCCCcccchhhHHHHHHHHHHHHHHhC--cCceEE
Confidence 012223578888877888888988876 345653
No 153
>PRK08643 acetoin reductase; Validated
Probab=98.24 E-value=3.7e-05 Score=68.63 Aligned_cols=155 Identities=15% Similarity=0.141 Sum_probs=87.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhh-----
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE----- 77 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~----- 77 (320)
++++|+||+|++|.+++..|++.|. +|++++++. +.++....++.+.... ...++....+..+
T Consensus 3 k~~lItGas~giG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 73 (256)
T PRK08643 3 KVALVTGAGQGIGFAIAKRLVEDGF-------KVAIVDYNE--ETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQV 73 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence 4789999999999999999999886 899999864 3333333333321100 1112222212222
Q ss_pred --hcCCCcEEEEeCCCCCC-CC--CC---HHHHHHhhHHHHHHHHHHH----hhhcCCCeEEEEEcCcchhhHHHHHHHC
Q 020875 78 --ACTGVNIAVMVGGFPRK-EG--ME---RKDVMSKNVSIYKAQASAL----EQHAAPNCKVLVVANPANTNALILKEFA 145 (320)
Q Consensus 78 --al~~aDvVi~~ag~~~~-~~--~~---r~~~~~~n~~~~~~i~~~i----~~~~~~~~~viv~snP~~~~~~~~~~~~ 145 (320)
.+.+.|+|||++|.... +. .+ ....+..|+.....+.+.+ ++.. ++.+++++|+....
T Consensus 74 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~~iv~~sS~~~~--------- 143 (256)
T PRK08643 74 VDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLG-HGGKIINATSQAGV--------- 143 (256)
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCCEEEEECccccc---------
Confidence 23468999999987432 11 11 2335667776554444444 3332 34577777754321
Q ss_pred CCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 146 PSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 146 ~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
.+.|....|+.++.-...+.+.+++.+ .+..|+.
T Consensus 144 ~~~~~~~~Y~~sK~a~~~~~~~la~e~--~~~gi~v 177 (256)
T PRK08643 144 VGNPELAVYSSTKFAVRGLTQTAARDL--ASEGITV 177 (256)
T ss_pred cCCCCCchhHHHHHHHHHHHHHHHHHh--cccCcEE
Confidence 122222346666665556666677765 3455663
No 154
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=98.24 E-value=1.1e-05 Score=71.83 Aligned_cols=161 Identities=17% Similarity=0.263 Sum_probs=92.3
Q ss_pred EEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcC-CCcEEE
Q 020875 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT-GVNIAV 86 (320)
Q Consensus 8 I~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~-~aDvVi 86 (320)
|+|+||+|+||++|+..|..+|+ +|.++-++.. +.+. ++ +.. +..-..+.+... ++|+||
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh-------~v~iltR~~~--~~~~---~~-~~~------v~~~~~~~~~~~~~~DavI 61 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGH-------QVTILTRRPP--KASQ---NL-HPN------VTLWEGLADALTLGIDAVI 61 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCC-------eEEEEEcCCc--chhh---hc-Ccc------ccccchhhhcccCCCCEEE
Confidence 68999999999999999999998 7888877642 2221 11 110 111112333333 799999
Q ss_pred EeCCCCCCCC----CCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCCcEEEeeh----
Q 020875 87 MVGGFPRKEG----MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTR---- 158 (320)
Q Consensus 87 ~~ag~~~~~~----~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~i~~~t~---- 158 (320)
++||.|-... .....+...-+..++.+.+.|.+.. ....+++-++-++.- |....++++-..
T Consensus 62 NLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~-~~P~~~isaSAvGyY---------G~~~~~~~tE~~~~g~ 131 (297)
T COG1090 62 NLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASE-TKPKVLISASAVGYY---------GHSGDRVVTEESPPGD 131 (297)
T ss_pred ECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhcc-CCCcEEEecceEEEe---------cCCCceeeecCCCCCC
Confidence 9999864221 1234566777889999999999765 334333333333210 111111222110
Q ss_pred -------hhHHHHHHHHHHHcCCCCCCeeeeEEEcCCC---Ccccccccc
Q 020875 159 -------LDHNRALGQISEKLNVQVSDVKNVIIWGNHS---SSQYPDVNH 198 (320)
Q Consensus 159 -------ld~~r~~~~~a~~l~v~~~~v~~~~v~G~hg---~~~~~~~S~ 198 (320)
.+=+. ...=|+.+|....-.|.-+|+|.-| ..|.|+++.
T Consensus 132 ~Fla~lc~~WE~-~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~ 180 (297)
T COG1090 132 DFLAQLCQDWEE-EALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKL 180 (297)
T ss_pred ChHHHHHHHHHH-HHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhh
Confidence 11111 1123455676666677667788555 367888754
No 155
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.23 E-value=9.8e-06 Score=82.82 Aligned_cols=135 Identities=13% Similarity=0.081 Sum_probs=81.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhc--CC
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC--TG 81 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al--~~ 81 (320)
..|||+||||+||+|++|+..|..+|+ ++... .. |+.|.. .+...+ .+
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~-------~v~~~-~~-----------~l~d~~-----------~v~~~i~~~~ 428 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQGI-------AYEYG-KG-----------RLEDRS-----------SLLADIRNVK 428 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCCC-------eEEee-cc-----------ccccHH-----------HHHHHHHhhC
Confidence 358999999999999999999998876 55211 10 111110 111122 26
Q ss_pred CcEEEEeCCCCCCCC-----CCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcC-cc-hhh-------HHHHHHHCCC
Q 020875 82 VNIAVMVGGFPRKEG-----MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN-PA-NTN-------ALILKEFAPS 147 (320)
Q Consensus 82 aDvVi~~ag~~~~~~-----~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~sn-P~-~~~-------~~~~~~~~~~ 147 (320)
.|+|||+|+....+. .+..+.+..|+..+.++++.+++.+ ++++++|. .+ +-- ..-+.+...-
T Consensus 429 pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g---~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~ 505 (668)
T PLN02260 429 PTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENG---LLMMNFATGCIFEYDAKHPEGSGIGFKEEDKP 505 (668)
T ss_pred CCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcC---CeEEEEcccceecCCcccccccCCCCCcCCCC
Confidence 899999998753221 2456678899999999999999975 34556642 21 000 0001111011
Q ss_pred CCCCcEEEeehhhHHHHHHHHHHH
Q 020875 148 IPAKNITCLTRLDHNRALGQISEK 171 (320)
Q Consensus 148 ~~~~~i~~~t~ld~~r~~~~~a~~ 171 (320)
.|+...||.+++...++...+++.
T Consensus 506 ~~~~~~Yg~sK~~~E~~~~~~~~~ 529 (668)
T PLN02260 506 NFTGSFYSKTKAMVEELLREYDNV 529 (668)
T ss_pred CCCCChhhHHHHHHHHHHHhhhhh
Confidence 122357899988887776555443
No 156
>PRK07102 short chain dehydrogenase; Provisional
Probab=98.23 E-value=2.4e-05 Score=69.35 Aligned_cols=157 Identities=13% Similarity=0.052 Sum_probs=86.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC----CCcceEEeCChhhhc-
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP----LLKGVVATTDAVEAC- 79 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~----~~~~v~~~~~~~~al- 79 (320)
|++|+|+||+|++|.+++..|++.|+ +|+++++++ +++.....++...... ...++....+..+.+
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~-------~Vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 71 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGA-------RLYLAARDV--ERLERLADDLRARGAVAVSTHELDILDTASHAAFLD 71 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCC-------EEEEEeCCH--HHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHH
Confidence 35899999999999999999999886 799999864 3333333333221100 112222222222222
Q ss_pred ---CCCcEEEEeCCCCCC---CCCCHH---HHHHhhHHHHHHHHHHHhhhcC--CCeEEEEEcCcchhhHHHHHHHCCCC
Q 020875 80 ---TGVNIAVMVGGFPRK---EGMERK---DVMSKNVSIYKAQASALEQHAA--PNCKVLVVANPANTNALILKEFAPSI 148 (320)
Q Consensus 80 ---~~aDvVi~~ag~~~~---~~~~r~---~~~~~n~~~~~~i~~~i~~~~~--~~~~viv~snP~~~~~~~~~~~~~~~ 148 (320)
+..|+||+.+|.... ...+.+ +.+..|+.....+.+.+..+-. ....++++|..... .+.
T Consensus 72 ~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~---------~~~ 142 (243)
T PRK07102 72 SLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGD---------RGR 142 (243)
T ss_pred HHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEeccccc---------CCC
Confidence 246999999886421 112222 3567787777777666554310 23567777654211 112
Q ss_pred CCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 149 PAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 149 ~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
+..-.++.++.-...+...++..+. ...++.
T Consensus 143 ~~~~~Y~~sK~a~~~~~~~l~~el~--~~gi~v 173 (243)
T PRK07102 143 ASNYVYGSAKAALTAFLSGLRNRLF--KSGVHV 173 (243)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHhh--ccCcEE
Confidence 2222466666555555555665543 334543
No 157
>PRK07825 short chain dehydrogenase; Provisional
Probab=98.23 E-value=2.2e-05 Score=70.90 Aligned_cols=159 Identities=16% Similarity=0.059 Sum_probs=88.0
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCC------
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTD------ 74 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~------ 74 (320)
|+.+.++|+||||+|.+|.+++..|+++|. .|++.++++ ++++....++.... ....++....+
T Consensus 1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~ 70 (273)
T PRK07825 1 DDLRGKVVAITGGARGIGLATARALAALGA-------RVAIGDLDE--ALAKETAAELGLVV-GGPLDVTDPASFAAFLD 70 (273)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHhccce-EEEccCCCHHHHHHHHH
Confidence 667778999999999999999999999887 788888864 33332222222110 00112211111
Q ss_pred -hhhhcCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHH----HHHHhhhcCCCeEEEEEcCcchhhHHHHHH
Q 020875 75 -AVEACTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQ----ASALEQHAAPNCKVLVVANPANTNALILKE 143 (320)
Q Consensus 75 -~~~al~~aDvVi~~ag~~~~~~---~~---r~~~~~~n~~~~~~i----~~~i~~~~~~~~~viv~snP~~~~~~~~~~ 143 (320)
..+.+.+.|++|+.||...... .+ ....+..|+.....+ .+.+.+.+ ...++++|+-...
T Consensus 71 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~--~g~iv~isS~~~~------- 141 (273)
T PRK07825 71 AVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG--RGHVVNVASLAGK------- 141 (273)
T ss_pred HHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CCEEEEEcCcccc-------
Confidence 1222357899999998743211 11 233566777654444 44444443 3567777754321
Q ss_pred HCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeee
Q 020875 144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182 (320)
Q Consensus 144 ~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~ 182 (320)
.+.|..-.|+.++.-...+...++..+. +.+++..
T Consensus 142 --~~~~~~~~Y~asKaa~~~~~~~l~~el~--~~gi~v~ 176 (273)
T PRK07825 142 --IPVPGMATYCASKHAVVGFTDAARLELR--GTGVHVS 176 (273)
T ss_pred --CCCCCCcchHHHHHHHHHHHHHHHHHhh--ccCcEEE
Confidence 1223222455555544445555655543 4455543
No 158
>PRK07814 short chain dehydrogenase; Provisional
Probab=98.23 E-value=1.2e-05 Score=72.21 Aligned_cols=151 Identities=14% Similarity=0.052 Sum_probs=88.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCC---CcceEEeCChhhh--
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVEA-- 78 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~---~~~v~~~~~~~~a-- 78 (320)
+.++++|+||+|++|.+++..|+.+|. +|++.+++. ++++....++....... ..+++...+..++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-------~Vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~ 79 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-------DVLIAARTE--SQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAG 79 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence 347899999999999999999999887 899999864 33333333332211000 1122111122222
Q ss_pred -----cCCCcEEEEeCCCCCCCC---C---CHHHHHHhhHHHHHHHHHHHhh----hcCCCeEEEEEcCcchhhHHHHHH
Q 020875 79 -----CTGVNIAVMVGGFPRKEG---M---ERKDVMSKNVSIYKAQASALEQ----HAAPNCKVLVVANPANTNALILKE 143 (320)
Q Consensus 79 -----l~~aDvVi~~ag~~~~~~---~---~r~~~~~~n~~~~~~i~~~i~~----~~~~~~~viv~snP~~~~~~~~~~ 143 (320)
+...|+|||.||...... . +..+.+..|+.....+.+.+.+ .. ....++++|+-...
T Consensus 80 ~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~iv~~sS~~~~------- 151 (263)
T PRK07814 80 QAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHS-GGGSVINISSTMGR------- 151 (263)
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhc-CCeEEEEEcccccc-------
Confidence 346899999998643211 1 1234567787777777777654 22 34567777753221
Q ss_pred HCCCCCCCcEEEeehhhHHHHHHHHHHHcC
Q 020875 144 FAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (320)
Q Consensus 144 ~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~ 173 (320)
.+.+....|+.++.-...+...++..+.
T Consensus 152 --~~~~~~~~Y~~sK~a~~~~~~~~~~e~~ 179 (263)
T PRK07814 152 --LAGRGFAAYGTAKAALAHYTRLAALDLC 179 (263)
T ss_pred --CCCCCCchhHHHHHHHHHHHHHHHHHHC
Confidence 1222223567776656667777777764
No 159
>PRK07890 short chain dehydrogenase; Provisional
Probab=98.22 E-value=6.1e-06 Score=73.66 Aligned_cols=154 Identities=16% Similarity=0.094 Sum_probs=87.7
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChh-
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAV- 76 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~- 76 (320)
|-...++|+|+||+|+||++++..|+.+|. +|++.++++ +.++....++...... ...++....+..
T Consensus 1 ~~l~~k~vlItGa~~~IG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 71 (258)
T PRK07890 1 MLLKGKVVVVSGVGPGLGRTLAVRAARAGA-------DVVLAARTA--ERLDEVAAEIDDLGRRALAVPTDITDEDQCAN 71 (258)
T ss_pred CccCCCEEEEECCCCcHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHHhCCceEEEecCCCCHHHHHH
Confidence 445567999999999999999999999987 899999864 3333333333211100 112222211222
Q ss_pred ------hhcCCCcEEEEeCCCCCC--C--CCC---HHHHHHhhHHHHHHHHHHHhhhcC-CCeEEEEEcCcchhhHHHHH
Q 020875 77 ------EACTGVNIAVMVGGFPRK--E--GME---RKDVMSKNVSIYKAQASALEQHAA-PNCKVLVVANPANTNALILK 142 (320)
Q Consensus 77 ------~al~~aDvVi~~ag~~~~--~--~~~---r~~~~~~n~~~~~~i~~~i~~~~~-~~~~viv~snP~~~~~~~~~ 142 (320)
+.+...|+|||.||.... + ..+ ..+.+..|+.....+.+.+.++-. ...++|++|+...
T Consensus 72 ~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~------- 144 (258)
T PRK07890 72 LVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVL------- 144 (258)
T ss_pred HHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhh-------
Confidence 223468999999986421 1 112 234577888877777777765321 1236677665321
Q ss_pred HHCCCCCCCcEEEeehhhHHHHHHHHHHHc
Q 020875 143 EFAPSIPAKNITCLTRLDHNRALGQISEKL 172 (320)
Q Consensus 143 ~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l 172 (320)
. .+.+....++.++.-...+.+.+++.+
T Consensus 145 ~--~~~~~~~~Y~~sK~a~~~l~~~~a~~~ 172 (258)
T PRK07890 145 R--HSQPKYGAYKMAKGALLAASQSLATEL 172 (258)
T ss_pred c--cCCCCcchhHHHHHHHHHHHHHHHHHH
Confidence 1 122322345555544445555566554
No 160
>PRK06128 oxidoreductase; Provisional
Probab=98.22 E-value=2.6e-05 Score=71.67 Aligned_cols=158 Identities=15% Similarity=0.122 Sum_probs=90.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChh-----
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAV----- 76 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~----- 76 (320)
.++|+||||+|++|.+++..|+..|. +|++.+++.+...++.....+...... ...++....+..
T Consensus 55 ~k~vlITGas~gIG~~~a~~l~~~G~-------~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~ 127 (300)
T PRK06128 55 GRKALITGADSGIGRATAIAFAREGA-------DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVER 127 (300)
T ss_pred CCEEEEecCCCcHHHHHHHHHHHcCC-------EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHH
Confidence 36899999999999999999999886 787776643222222222222221110 111222221222
Q ss_pred --hhcCCCcEEEEeCCCCCC--C--CC---CHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCC
Q 020875 77 --EACTGVNIAVMVGGFPRK--E--GM---ERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS 147 (320)
Q Consensus 77 --~al~~aDvVi~~ag~~~~--~--~~---~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~ 147 (320)
+.+...|++|+.||.... + .. ...+.+..|+.....+++.+.++-.+..++|++|+.... .+
T Consensus 128 ~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~---------~~ 198 (300)
T PRK06128 128 AVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSY---------QP 198 (300)
T ss_pred HHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCcccc---------CC
Confidence 223468999999986421 1 11 234567889988888888887653234567776653211 11
Q ss_pred CCCCcEEEeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 148 IPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 148 ~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
.+..-.|+.++.-...+-+.+++.+. +..|+
T Consensus 199 ~~~~~~Y~asK~a~~~~~~~la~el~--~~gI~ 229 (300)
T PRK06128 199 SPTLLDYASTKAAIVAFTKALAKQVA--EKGIR 229 (300)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHhh--hcCcE
Confidence 12112356666656666677777654 33454
No 161
>PRK05993 short chain dehydrogenase; Provisional
Probab=98.21 E-value=1.7e-05 Score=71.94 Aligned_cols=149 Identities=7% Similarity=0.068 Sum_probs=83.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC-CCCcceEEeCChhhhc-----
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVEAC----- 79 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~~~~~~al----- 79 (320)
++|+||||+|++|.+++..|++.|. +|++.++++ +.+.. +.+... ....++....+..+++
T Consensus 5 k~vlItGasggiG~~la~~l~~~G~-------~Vi~~~r~~--~~~~~----l~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 71 (277)
T PRK05993 5 RSILITGCSSGIGAYCARALQSDGW-------RVFATCRKE--EDVAA----LEAEGLEAFQLDYAEPESIAALVAQVLE 71 (277)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHH----HHHCCceEEEccCCCHHHHHHHHHHHHH
Confidence 5899999999999999999999886 899999864 22321 111110 0111222211222222
Q ss_pred ---CCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHH----HHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCC
Q 020875 80 ---TGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKEFAP 146 (320)
Q Consensus 80 ---~~aDvVi~~ag~~~~~~---~~---r~~~~~~n~~~----~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~ 146 (320)
...|++|+.||...... .+ ....+..|+.. ++.+++.+++.+ ..++|++|+.... .
T Consensus 72 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~--~g~iv~isS~~~~---------~ 140 (277)
T PRK05993 72 LSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG--QGRIVQCSSILGL---------V 140 (277)
T ss_pred HcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC--CCEEEEECChhhc---------C
Confidence 25799999998743211 12 23456777766 666777776654 3567777753211 1
Q ss_pred CCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 147 ~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
..+..-.|+.++.....+-..++..+. +..|+
T Consensus 141 ~~~~~~~Y~asK~a~~~~~~~l~~el~--~~gi~ 172 (277)
T PRK05993 141 PMKYRGAYNASKFAIEGLSLTLRMELQ--GSGIH 172 (277)
T ss_pred CCCccchHHHHHHHHHHHHHHHHHHhh--hhCCE
Confidence 223223456665555555555554443 34454
No 162
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=98.21 E-value=7.9e-05 Score=64.18 Aligned_cols=96 Identities=18% Similarity=0.172 Sum_probs=62.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDv 84 (320)
||+++|+| +|.+|+.++.++...|+ ||.+-.++. +++++.....+.- .++.. ...+|.+.+|+
T Consensus 1 m~~~~i~G-tGniG~alA~~~a~ag~-------eV~igs~r~-~~~~~a~a~~l~~-------~i~~~-~~~dA~~~aDV 63 (211)
T COG2085 1 MMIIAIIG-TGNIGSALALRLAKAGH-------EVIIGSSRG-PKALAAAAAALGP-------LITGG-SNEDAAALADV 63 (211)
T ss_pred CcEEEEec-cChHHHHHHHHHHhCCC-------eEEEecCCC-hhHHHHHHHhhcc-------ccccC-ChHHHHhcCCE
Confidence 57899999 79999999999999998 887776553 2333333332221 23332 46789999999
Q ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcc
Q 020875 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPA 134 (320)
Q Consensus 85 Vi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~ 134 (320)
||.+.-+ +.+..+++.++..- .+.++|-.|||.
T Consensus 64 VvLAVP~----------------~a~~~v~~~l~~~~-~~KIvID~tnp~ 96 (211)
T COG2085 64 VVLAVPF----------------EAIPDVLAELRDAL-GGKIVIDATNPI 96 (211)
T ss_pred EEEeccH----------------HHHHhHHHHHHHHh-CCeEEEecCCCc
Confidence 9998521 22334455555432 345677789994
No 163
>PRK06197 short chain dehydrogenase; Provisional
Probab=98.20 E-value=8.8e-06 Score=74.96 Aligned_cols=158 Identities=11% Similarity=0.036 Sum_probs=88.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhccc--CC---CCcceEEeCChhhh-
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA--FP---LLKGVVATTDAVEA- 78 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~--~~---~~~~v~~~~~~~~a- 78 (320)
.++|+||||+|+||++++..|++.|. +|++++++. +++.....++.... .. ...++....+..++
T Consensus 16 ~k~vlItGas~gIG~~~a~~l~~~G~-------~vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~ 86 (306)
T PRK06197 16 GRVAVVTGANTGLGYETAAALAAKGA-------HVVLAVRNL--DKGKAAAARITAATPGADVTLQELDLTSLASVRAAA 86 (306)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHH
Confidence 46899999999999999999999886 788888863 33332222332110 00 01122221122222
Q ss_pred ------cCCCcEEEEeCCCCCCCC----CCHHHHHHhhHHH----HHHHHHHHhhhcCCCeEEEEEcCcchhh-HHH-HH
Q 020875 79 ------CTGVNIAVMVGGFPRKEG----MERKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTN-ALI-LK 142 (320)
Q Consensus 79 ------l~~aDvVi~~ag~~~~~~----~~r~~~~~~n~~~----~~~i~~~i~~~~~~~~~viv~snP~~~~-~~~-~~ 142 (320)
+...|+||+.||....+. ......+..|+.. ++.+.+.+++.. ..++|++|+..... ... ..
T Consensus 87 ~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~--~~~iV~vSS~~~~~~~~~~~~ 164 (306)
T PRK06197 87 DALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP--GSRVVTVSSGGHRIRAAIHFD 164 (306)
T ss_pred HHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC--CCEEEEECCHHHhccCCCCcc
Confidence 236899999998642211 1223346677666 666677766543 35777777543111 000 00
Q ss_pred HH--CCCCCCCcEEEeehhhHHHHHHHHHHHcC
Q 020875 143 EF--APSIPAKNITCLTRLDHNRALGQISEKLN 173 (320)
Q Consensus 143 ~~--~~~~~~~~i~~~t~ld~~r~~~~~a~~l~ 173 (320)
.. ...+++...|+.+++-...+.+.+++.+.
T Consensus 165 ~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~ 197 (306)
T PRK06197 165 DLQWERRYNRVAAYGQSKLANLLFTYELQRRLA 197 (306)
T ss_pred ccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence 00 00122223467777777777788888875
No 164
>PRK08263 short chain dehydrogenase; Provisional
Probab=98.20 E-value=1e-05 Score=73.28 Aligned_cols=147 Identities=14% Similarity=0.122 Sum_probs=80.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCCh-------hhh
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDA-------VEA 78 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~-------~~a 78 (320)
++|+|+||+|++|++++..|+++|+ +|++.+++. +.+......+.........++....+. .+.
T Consensus 4 k~vlItGasg~iG~~~a~~l~~~g~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 74 (275)
T PRK08263 4 KVWFITGASRGFGRAWTEAALERGD-------RVVATARDT--ATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEH 74 (275)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHH
Confidence 4899999999999999999999886 789999864 222211111110000001111111111 122
Q ss_pred cCCCcEEEEeCCCCCCCC------CCHHHHHHhhHHHHHHHHHH----HhhhcCCCeEEEEEcCcchhhHHHHHHHCCCC
Q 020875 79 CTGVNIAVMVGGFPRKEG------MERKDVMSKNVSIYKAQASA----LEQHAAPNCKVLVVANPANTNALILKEFAPSI 148 (320)
Q Consensus 79 l~~aDvVi~~ag~~~~~~------~~r~~~~~~n~~~~~~i~~~----i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~ 148 (320)
+...|+|||+||...... .+..+.+..|+.....+.+. +++.. . .++|++|..... .+.
T Consensus 75 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~-~~iv~vsS~~~~---------~~~ 143 (275)
T PRK08263 75 FGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-S-GHIIQISSIGGI---------SAF 143 (275)
T ss_pred cCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-C-CEEEEEcChhhc---------CCC
Confidence 346799999999753211 12344677888776555554 44443 2 456666643211 122
Q ss_pred CCCcEEEeehhhHHHHHHHHHHHc
Q 020875 149 PAKNITCLTRLDHNRALGQISEKL 172 (320)
Q Consensus 149 ~~~~i~~~t~ld~~r~~~~~a~~l 172 (320)
|..-.|+.++.-...+...+++.+
T Consensus 144 ~~~~~Y~~sKaa~~~~~~~la~e~ 167 (275)
T PRK08263 144 PMSGIYHASKWALEGMSEALAQEV 167 (275)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHh
Confidence 322245666554445555566654
No 165
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.20 E-value=1.3e-05 Score=71.15 Aligned_cols=156 Identities=14% Similarity=0.087 Sum_probs=85.5
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChh-
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAV- 76 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~- 76 (320)
|+.+..+|+|+||+|+||++++..|+++|. ++++..++. .+.......++...... ...+++...+..
T Consensus 2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~-------~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 73 (252)
T PRK06077 2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGS-------LVVVNAKKR-AEEMNETLKMVKENGGEGIGVLADVSTREGCET 73 (252)
T ss_pred CCCCCcEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCC-hHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHH
Confidence 344567999999999999999999999887 666554432 12222222222211100 011222111222
Q ss_pred ------hhcCCCcEEEEeCCCCCCCC---CCH---HHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHH
Q 020875 77 ------EACTGVNIAVMVGGFPRKEG---MER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEF 144 (320)
Q Consensus 77 ------~al~~aDvVi~~ag~~~~~~---~~r---~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~ 144 (320)
+.+...|+|||+||...... .+. .+.+..|+.....+++.+.++-.+..++|++|+-..
T Consensus 74 ~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~--------- 144 (252)
T PRK06077 74 LAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG--------- 144 (252)
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc---------
Confidence 22346899999998743211 122 234567776666666666654323346666664221
Q ss_pred CCCCCCCcEEEeehhhHHHHHHHHHHHcC
Q 020875 145 APSIPAKNITCLTRLDHNRALGQISEKLN 173 (320)
Q Consensus 145 ~~~~~~~~i~~~t~ld~~r~~~~~a~~l~ 173 (320)
..+.++...++.++.....+...+++.++
T Consensus 145 ~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~ 173 (252)
T PRK06077 145 IRPAYGLSIYGAMKAAVINLTKYLALELA 173 (252)
T ss_pred cCCCCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 12333333456666666667677777765
No 166
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=98.20 E-value=8.6e-06 Score=72.17 Aligned_cols=117 Identities=19% Similarity=0.117 Sum_probs=69.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhhc--
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEAC-- 79 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~al-- 79 (320)
.++|+|+||+|++|.+++..|+++|. +|++++++. +++.....++...... ...++....+..+.+
T Consensus 6 ~~~ilItGasg~iG~~l~~~l~~~g~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~ 76 (251)
T PRK12826 6 GRVALVTGAARGIGRAIAVRLAADGA-------EVIVVDICG--DDAAATAELVEAAGGKARARQVDVRDRAALKAAVAA 76 (251)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence 46899999999999999999999886 789999864 2333222233221100 011222222222222
Q ss_pred -----CCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHHh----hhcCCCeEEEEEcC
Q 020875 80 -----TGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALE----QHAAPNCKVLVVAN 132 (320)
Q Consensus 80 -----~~aDvVi~~ag~~~~~---~~~r---~~~~~~n~~~~~~i~~~i~----~~~~~~~~viv~sn 132 (320)
..+|+|||++|..... ..+. .+.+..|+.....+.+.+. +.. ..+++++|+
T Consensus 77 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~ii~~ss 142 (251)
T PRK12826 77 GVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG--GGRIVLTSS 142 (251)
T ss_pred HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--CcEEEEEec
Confidence 3689999999764321 1222 3456777777777766653 332 245666664
No 167
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=98.20 E-value=8.4e-06 Score=73.29 Aligned_cols=154 Identities=14% Similarity=0.130 Sum_probs=86.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHH-----HHHHHhcccCCCCcceEE-eCChhh
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG-----VKMELVDAAFPLLKGVVA-TTDAVE 77 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~-----~~~dl~~~~~~~~~~v~~-~~~~~~ 77 (320)
+.++++|+||+|.+|.+++..|+++|. +|++.++++. .+.. ...|+.+.. .+.. .....+
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~-------~v~~~~~~~~--~~~~~~~~~~~~D~~~~~-----~~~~~~~~~~~ 73 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGA-------NVVNADIHGG--DGQHENYQFVPTDVSSAE-----EVNHTVAEIIE 73 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCcc--ccccCceEEEEccCCCHH-----HHHHHHHHHHH
Confidence 456899999999999999999999987 7888888642 1111 112222211 0000 001122
Q ss_pred hcCCCcEEEEeCCCCCCC------------CCC---HHHHHHhhHHHHHHHHHHHhhhcC--CCeEEEEEcCcchhhHHH
Q 020875 78 ACTGVNIAVMVGGFPRKE------------GME---RKDVMSKNVSIYKAQASALEQHAA--PNCKVLVVANPANTNALI 140 (320)
Q Consensus 78 al~~aDvVi~~ag~~~~~------------~~~---r~~~~~~n~~~~~~i~~~i~~~~~--~~~~viv~snP~~~~~~~ 140 (320)
.+...|++|++||..... ..+ ....+..|+.....+.+.+.++-. +...+|++|+-...
T Consensus 74 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~---- 149 (266)
T PRK06171 74 KFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGL---- 149 (266)
T ss_pred HcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEcccccc----
Confidence 234679999999864210 112 233567787777777666654321 23466777654321
Q ss_pred HHHHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeee
Q 020875 141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182 (320)
Q Consensus 141 ~~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~ 182 (320)
.+.+..-.|+.++.-...+-+.+++.+. +..|+..
T Consensus 150 -----~~~~~~~~Y~~sK~a~~~l~~~la~e~~--~~gi~v~ 184 (266)
T PRK06171 150 -----EGSEGQSCYAATKAALNSFTRSWAKELG--KHNIRVV 184 (266)
T ss_pred -----CCCCCCchhHHHHHHHHHHHHHHHHHhh--hcCeEEE
Confidence 1122222456665544556666777664 4556643
No 168
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=98.20 E-value=2.5e-05 Score=71.63 Aligned_cols=104 Identities=16% Similarity=0.269 Sum_probs=64.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHH-------Hh---c-ccC------CCCcc
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKME-------LV---D-AAF------PLLKG 68 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~d-------l~---~-~~~------~~~~~ 68 (320)
.||+|+| +|.+|..++..|+..|+ +|+++|+++ +.++..... +. + ... .....
T Consensus 4 ~~I~ViG-aG~mG~~iA~~la~~G~-------~V~l~d~~~--~~l~~~~~~i~~~~~~l~~~~~~g~~~~~~~~~~~~~ 73 (291)
T PRK06035 4 KVIGVVG-SGVMGQGIAQVFARTGY-------DVTIVDVSE--EILKNAMELIESGPYGLRNLVEKGKMSEDEAKAIMAR 73 (291)
T ss_pred cEEEEEC-ccHHHHHHHHHHHhcCC-------eEEEEeCCH--HHHHHHHHHHHhhhhhHHHHHHcCCCCHHHHHHHHhC
Confidence 5899999 69999999999999887 899999874 333211111 11 0 000 00123
Q ss_pred eEEeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchh
Q 020875 69 VVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136 (320)
Q Consensus 69 v~~~~~~~~al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~ 136 (320)
+..+++. +++++||+||.+... +.+..+++.+.+.+++++++++ +||....
T Consensus 74 i~~~~~~-~~~~~aDlVieav~e--------------~~~~k~~~~~~l~~~~~~~~il--~S~tsg~ 124 (291)
T PRK06035 74 IRTSTSY-ESLSDADFIVEAVPE--------------KLDLKRKVFAELERNVSPETII--ASNTSGI 124 (291)
T ss_pred cEeeCCH-HHhCCCCEEEEcCcC--------------cHHHHHHHHHHHHhhCCCCeEE--EEcCCCC
Confidence 5555565 678999999998521 1233456666777776566543 4554443
No 169
>PRK06398 aldose dehydrogenase; Validated
Probab=98.19 E-value=1.9e-05 Score=70.92 Aligned_cols=149 Identities=13% Similarity=0.090 Sum_probs=86.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccc-hhHHHHHHHhcccCCCCcceEE-eCChhhhcCC
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAE-ALNGVKMELVDAAFPLLKGVVA-TTDAVEACTG 81 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~-~~~~~~~dl~~~~~~~~~~v~~-~~~~~~al~~ 81 (320)
+.++++||||+|.+|.+++..|++.|. +|++.++++... .+.....|+.+.. .+.. .....+.+..
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-------~Vi~~~r~~~~~~~~~~~~~D~~~~~-----~i~~~~~~~~~~~~~ 72 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-------NVINFDIKEPSYNDVDYFKVDVSNKE-----QVIKGIDYVISKYGR 72 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-------eEEEEeCCccccCceEEEEccCCCHH-----HHHHHHHHHHHHcCC
Confidence 447899999999999999999999887 788888764211 1111122333221 0000 0011222346
Q ss_pred CcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEEcCcchhhHHHHHHHCCCCCCCcE
Q 020875 82 VNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEFAPSIPAKNI 153 (320)
Q Consensus 82 aDvVi~~ag~~~~~---~~~---r~~~~~~n~~~~~~i~~~i~~~~--~~~~~viv~snP~~~~~~~~~~~~~~~~~~~i 153 (320)
.|++|+.||..... ..+ ....+..|+.....+.+.+.++- ...+++|++|+-... ...+..-.
T Consensus 73 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~---------~~~~~~~~ 143 (258)
T PRK06398 73 IDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSF---------AVTRNAAA 143 (258)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhc---------cCCCCCch
Confidence 89999999874321 112 23446778776666655544321 124667777653211 12233335
Q ss_pred EEeehhhHHHHHHHHHHHcC
Q 020875 154 TCLTRLDHNRALGQISEKLN 173 (320)
Q Consensus 154 ~~~t~ld~~r~~~~~a~~l~ 173 (320)
|+.++.....+-+.++..++
T Consensus 144 Y~~sKaal~~~~~~la~e~~ 163 (258)
T PRK06398 144 YVTSKHAVLGLTRSIAVDYA 163 (258)
T ss_pred hhhhHHHHHHHHHHHHHHhC
Confidence 77777666677777888775
No 170
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=98.19 E-value=3e-06 Score=75.84 Aligned_cols=113 Identities=15% Similarity=0.126 Sum_probs=68.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcc-cC-CCCcceEE-eCChhhhc-
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-AF-PLLKGVVA-TTDAVEAC- 79 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~-~~-~~~~~v~~-~~~~~~al- 79 (320)
.++||+|+||+|++|+.++..|+.+|+ +|+++.++. +++... +.+. .. ....++.. ..++.+++
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~-------~V~~~~R~~--~~~~~~---~~~~~~~~~~~~Dl~d~~~~l~~~~~ 83 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGF-------AVKAGVRDV--DKAKTS---LPQDPSLQIVRADVTEGSDKLVEAIG 83 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCC-------EEEEEecCH--HHHHHh---cccCCceEEEEeeCCCCHHHHHHHhh
Confidence 468999999999999999999999886 787776653 222111 1110 00 01112221 12345667
Q ss_pred CCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcC
Q 020875 80 TGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN 132 (320)
Q Consensus 80 ~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~sn 132 (320)
.++|+||+++|.....+. .+....|......+++.+++.+ . .++|++|.
T Consensus 84 ~~~d~vi~~~g~~~~~~~--~~~~~~n~~~~~~ll~a~~~~~-~-~~iV~iSS 132 (251)
T PLN00141 84 DDSDAVICATGFRRSFDP--FAPWKVDNFGTVNLVEACRKAG-V-TRFILVSS 132 (251)
T ss_pred cCCCEEEECCCCCcCCCC--CCceeeehHHHHHHHHHHHHcC-C-CEEEEEcc
Confidence 689999998876432111 1123456667788888888764 2 35666553
No 171
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.19 E-value=2.2e-05 Score=69.07 Aligned_cols=154 Identities=12% Similarity=0.072 Sum_probs=88.7
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccch---hHHHHHHHhcccCCCCcceEEeCChhh
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEA---LNGVKMELVDAAFPLLKGVVATTDAVE 77 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~---~~~~~~dl~~~~~~~~~~v~~~~~~~~ 77 (320)
|+.+.+++.|+||+|++|++++..|++.|+ +|++.++++.... +.....|+.+. .....+
T Consensus 1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~-------~v~~~~r~~~~~~~~~~~~~~~D~~~~----------~~~~~~ 63 (235)
T PRK06550 1 QEFMTKTVLITGAASGIGLAQARAFLAQGA-------QVYGVDKQDKPDLSGNFHFLQLDLSDD----------LEPLFD 63 (235)
T ss_pred CCCCCCEEEEcCCCchHHHHHHHHHHHCCC-------EEEEEeCCcccccCCcEEEEECChHHH----------HHHHHH
Confidence 566667999999999999999999999887 7888888642110 00001111111 012233
Q ss_pred hcCCCcEEEEeCCCCCC--C--CCC---HHHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEEcCcchhhHHHHHHHCCCC
Q 020875 78 ACTGVNIAVMVGGFPRK--E--GME---RKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEFAPSI 148 (320)
Q Consensus 78 al~~aDvVi~~ag~~~~--~--~~~---r~~~~~~n~~~~~~i~~~i~~~~--~~~~~viv~snP~~~~~~~~~~~~~~~ 148 (320)
.+...|+||+.+|.... + ..+ ..+.+..|+.....+.+.+.... .+..+++++|..... .+.
T Consensus 64 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~---------~~~ 134 (235)
T PRK06550 64 WVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASF---------VAG 134 (235)
T ss_pred hhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhc---------cCC
Confidence 45678999999986421 1 112 23456778777666666654321 123466666643211 112
Q ss_pred CCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeee
Q 020875 149 PAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182 (320)
Q Consensus 149 ~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~ 182 (320)
+..-.|+.++.-...+...+++.++ +..|+..
T Consensus 135 ~~~~~Y~~sK~a~~~~~~~la~~~~--~~gi~v~ 166 (235)
T PRK06550 135 GGGAAYTASKHALAGFTKQLALDYA--KDGIQVF 166 (235)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHhh--hcCeEEE
Confidence 2222466666555566667777764 3556643
No 172
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.18 E-value=2.3e-05 Score=69.29 Aligned_cols=124 Identities=19% Similarity=0.154 Sum_probs=70.2
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEE-ecCCccchhHHHHHHHhcccCC---CCcceEEeCChh
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHML-DIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAV 76 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~-D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~ 76 (320)
|..++++|+|+||+|++|++++..|++.|+ ++++. +++. +++......+...... ...++....++.
T Consensus 1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~-------~v~~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 71 (247)
T PRK05565 1 MKLMGKVAIVTGASGGIGRAIAELLAKEGA-------KVVIAYDINE--EAAQELLEEIKEEGGDAIAVKADVSSEEDVE 71 (247)
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEcCCCH--HHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 555667999999999999999999998886 67777 8763 2332222222221100 011222111222
Q ss_pred hhc-------CCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHHhhhcC--CCeEEEEEcCc
Q 020875 77 EAC-------TGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASALEQHAA--PNCKVLVVANP 133 (320)
Q Consensus 77 ~al-------~~aDvVi~~ag~~~~~~---~~---r~~~~~~n~~~~~~i~~~i~~~~~--~~~~viv~snP 133 (320)
+.+ .+.|+||+.+|...... .+ ..+.+..|......+.+.+..... ....+|++|+.
T Consensus 72 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~ 143 (247)
T PRK05565 72 NLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSI 143 (247)
T ss_pred HHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCH
Confidence 222 37899999998752111 12 234566787776666655544311 12456666654
No 173
>PRK12828 short chain dehydrogenase; Provisional
Probab=98.18 E-value=9.1e-06 Score=71.39 Aligned_cols=121 Identities=14% Similarity=0.085 Sum_probs=69.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCC-CcceEEeCChhhh---
Q 020875 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATTDAVEA--- 78 (320)
Q Consensus 3 ~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~-~~~v~~~~~~~~a--- 78 (320)
.+.++|+|+||+|++|++++..|+++|. +|+++++++ ++......++....... ..++....++.++
T Consensus 5 ~~~k~vlItGatg~iG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 75 (239)
T PRK12828 5 LQGKVVAITGGFGGLGRATAAWLAARGA-------RVALIGRGA--APLSQTLPGVPADALRIGGIDLVDPQAARRAVDE 75 (239)
T ss_pred CCCCEEEEECCCCcHhHHHHHHHHHCCC-------eEEEEeCCh--HhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHH
Confidence 3457999999999999999999999887 799999864 22222222232211110 1122111122222
Q ss_pred ----cCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEEcC
Q 020875 79 ----CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHA--APNCKVLVVAN 132 (320)
Q Consensus 79 ----l~~aDvVi~~ag~~~~~---~~~r---~~~~~~n~~~~~~i~~~i~~~~--~~~~~viv~sn 132 (320)
+..+|+||+.+|..... ..+. .+.+..|......+++.+.+.- .+..+++++|+
T Consensus 76 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS 141 (239)
T PRK12828 76 VNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGA 141 (239)
T ss_pred HHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECc
Confidence 33689999998864211 1122 2345677777777766664321 12346676665
No 174
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=98.18 E-value=2.6e-05 Score=69.18 Aligned_cols=158 Identities=14% Similarity=0.094 Sum_probs=88.6
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC---CCCcceEEeCChh-
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF---PLLKGVVATTDAV- 76 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~---~~~~~v~~~~~~~- 76 (320)
|..+.++|+||||+|.+|.+++..|++.|+ +|+++++++. +.+. ..+..... ....++....+..
T Consensus 1 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~-------~vi~~~r~~~-~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~ 69 (248)
T TIGR01832 1 FSLEGKVALVTGANTGLGQGIAVGLAEAGA-------DIVGAGRSEP-SETQ---QQVEALGRRFLSLTADLSDIEAIKA 69 (248)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEcCchH-HHHH---HHHHhcCCceEEEECCCCCHHHHHH
Confidence 445567999999999999999999999987 7899987531 1111 11211110 0111222211222
Q ss_pred ------hhcCCCcEEEEeCCCCCCCC---C---CHHHHHHhhHHHHHHHHHHHhhh---cCCCeEEEEEcCcchhhHHHH
Q 020875 77 ------EACTGVNIAVMVGGFPRKEG---M---ERKDVMSKNVSIYKAQASALEQH---AAPNCKVLVVANPANTNALIL 141 (320)
Q Consensus 77 ------~al~~aDvVi~~ag~~~~~~---~---~r~~~~~~n~~~~~~i~~~i~~~---~~~~~~viv~snP~~~~~~~~ 141 (320)
+.+...|++|+.+|...... . ...+.+..|+.....+.+.+.+. .....++|++|+-...
T Consensus 70 ~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~----- 144 (248)
T TIGR01832 70 LVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSF----- 144 (248)
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhc-----
Confidence 22346899999998743211 1 22345677877666666665432 1123567776642210
Q ss_pred HHHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 142 ~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
.+.+....|+.++.-...+.+.+++.+. +..|+
T Consensus 145 ----~~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~gi~ 177 (248)
T TIGR01832 145 ----QGGIRVPSYTASKHGVAGLTKLLANEWA--AKGIN 177 (248)
T ss_pred ----cCCCCCchhHHHHHHHHHHHHHHHHHhC--ccCcE
Confidence 1122222466666555566677777764 34455
No 175
>PRK07576 short chain dehydrogenase; Provisional
Probab=98.18 E-value=1.1e-05 Score=72.59 Aligned_cols=157 Identities=13% Similarity=0.144 Sum_probs=88.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhh--
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA-- 78 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~a-- 78 (320)
+.++|+|+||+|.||++++..|+..|+ +|++++++. +.+.....++...... ...++....+..++
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~ 78 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-------NVAVASRSQ--EKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFA 78 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHH
Confidence 346999999999999999999999887 799999864 3333322233221100 01122222222222
Q ss_pred -----cCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHHhhhc-CCCeEEEEEcCcchhhHHHHHHHCC
Q 020875 79 -----CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHA-APNCKVLVVANPANTNALILKEFAP 146 (320)
Q Consensus 79 -----l~~aDvVi~~ag~~~~~---~~~r---~~~~~~n~~~~~~i~~~i~~~~-~~~~~viv~snP~~~~~~~~~~~~~ 146 (320)
+...|++|+.+|..... ..+. .+.+..|+.....+.+.+.+.- .++..++++|+.... .
T Consensus 79 ~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~---------~ 149 (264)
T PRK07576 79 QIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAF---------V 149 (264)
T ss_pred HHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhc---------c
Confidence 24579999998753211 1122 2346678777777776665431 123567777765321 1
Q ss_pred CCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 147 ~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
+.+..-.|+.++.-...+-..++..+. +..++
T Consensus 150 ~~~~~~~Y~asK~a~~~l~~~la~e~~--~~gi~ 181 (264)
T PRK07576 150 PMPMQAHVCAAKAGVDMLTRTLALEWG--PEGIR 181 (264)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHhh--hcCeE
Confidence 122222456666555666666776654 33444
No 176
>PRK07069 short chain dehydrogenase; Validated
Probab=98.18 E-value=2.3e-05 Score=69.51 Aligned_cols=156 Identities=21% Similarity=0.212 Sum_probs=89.6
Q ss_pred EEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC-----CCcceEEeCCh------
Q 020875 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-----LLKGVVATTDA------ 75 (320)
Q Consensus 7 kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~-----~~~~v~~~~~~------ 75 (320)
||+|+||+|++|.+++..|+.+|. +|++.+++. .+.++....++.+.... ...++....+.
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~-------~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 72 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGA-------KVFLTDIND-AAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQ 72 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCc-chHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHH
Confidence 589999999999999999999886 899999862 13333333333221100 00122111112
Q ss_pred -hhhcCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHH----HHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHH
Q 020875 76 -VEACTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALILKEF 144 (320)
Q Consensus 76 -~~al~~aDvVi~~ag~~~~~~---~~---r~~~~~~n~~----~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~ 144 (320)
.+.+...|+||+.+|...... .+ ....+..|+. .++.+.+.+++.. ..+++++|+....
T Consensus 73 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~ii~~ss~~~~-------- 142 (251)
T PRK07069 73 AADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ--PASIVNISSVAAF-------- 142 (251)
T ss_pred HHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC--CcEEEEecChhhc--------
Confidence 122356899999998753211 12 2234567776 7777888887653 3467777654311
Q ss_pred CCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 145 ~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
.+.+..-.|+.++.....+.+.+++.+.-....++.
T Consensus 143 -~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v 178 (251)
T PRK07069 143 -KAEPDYTAYNASKAAVASLTKSIALDCARRGLDVRC 178 (251)
T ss_pred -cCCCCCchhHHHHHHHHHHHHHHHHHhcccCCcEEE
Confidence 112222246666665556666777776544344553
No 177
>PRK06182 short chain dehydrogenase; Validated
Probab=98.17 E-value=4.4e-06 Score=75.55 Aligned_cols=114 Identities=15% Similarity=0.136 Sum_probs=68.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhc-----
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC----- 79 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al----- 79 (320)
.++|+||||+|++|.+++..|++.|+ +|++.++++ +++..... ........++....+..+.+
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~G~-------~V~~~~r~~--~~l~~~~~---~~~~~~~~Dv~~~~~~~~~~~~~~~ 70 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQGY-------TVYGAARRV--DKMEDLAS---LGVHPLSLDVTDEASIKAAVDTIIA 70 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHh---CCCeEEEeeCCCHHHHHHHHHHHHH
Confidence 45899999999999999999999887 788888864 33321110 00001112222222233333
Q ss_pred --CCCcEEEEeCCCCCCC---C---CCHHHHHHhhHHH----HHHHHHHHhhhcCCCeEEEEEcC
Q 020875 80 --TGVNIAVMVGGFPRKE---G---MERKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVAN 132 (320)
Q Consensus 80 --~~aDvVi~~ag~~~~~---~---~~r~~~~~~n~~~----~~~i~~~i~~~~~~~~~viv~sn 132 (320)
.+.|++|+.||..... . ++....+..|+.. ++.+++.+++.. ..++|++|+
T Consensus 71 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~--~g~iv~isS 133 (273)
T PRK06182 71 EEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR--SGRIINISS 133 (273)
T ss_pred hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC--CCEEEEEcc
Confidence 3789999999875321 1 1233456677655 556666666653 246777765
No 178
>PRK05866 short chain dehydrogenase; Provisional
Probab=98.17 E-value=4e-05 Score=70.30 Aligned_cols=151 Identities=16% Similarity=0.120 Sum_probs=83.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhh--
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA-- 78 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~a-- 78 (320)
+.++|+|+||+|.+|.+++..|+++|. +|++++++. ++++....++...... ...++....+..++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-------~Vi~~~R~~--~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~ 109 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-------TVVAVARRE--DLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVA 109 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence 346899999999999999999999886 899999864 3444333333211100 11122222222233
Q ss_pred -----cCCCcEEEEeCCCCCCCC--C---CH---HHHHHhhHHHHHHH----HHHHhhhcCCCeEEEEEcCcchhhHHHH
Q 020875 79 -----CTGVNIAVMVGGFPRKEG--M---ER---KDVMSKNVSIYKAQ----ASALEQHAAPNCKVLVVANPANTNALIL 141 (320)
Q Consensus 79 -----l~~aDvVi~~ag~~~~~~--~---~r---~~~~~~n~~~~~~i----~~~i~~~~~~~~~viv~snP~~~~~~~~ 141 (320)
+.+.|++|++||...... . +. ...+..|......+ .+.+++.+ ...+|++|+- ..
T Consensus 110 ~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--~g~iv~isS~-~~----- 181 (293)
T PRK05866 110 DVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG--DGHIINVATW-GV----- 181 (293)
T ss_pred HHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CcEEEEECCh-hh-----
Confidence 337899999998753211 1 11 23456666554444 44444443 3566666642 11
Q ss_pred HHHCCCCCCCcEEEeehhhHHHHHHHHHHHcC
Q 020875 142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (320)
Q Consensus 142 ~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~ 173 (320)
+....|..-.|+.++.....+...++..+.
T Consensus 182 --~~~~~p~~~~Y~asKaal~~l~~~la~e~~ 211 (293)
T PRK05866 182 --LSEASPLFSVYNASKAALSAVSRVIETEWG 211 (293)
T ss_pred --cCCCCCCcchHHHHHHHHHHHHHHHHHHhc
Confidence 001123222466666655566666766664
No 179
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=98.17 E-value=4.5e-05 Score=73.47 Aligned_cols=106 Identities=22% Similarity=0.317 Sum_probs=67.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCC--------------CcceEE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL--------------LKGVVA 71 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~--------------~~~v~~ 71 (320)
|||+|+| .|.+|..++..|++.|+ +|.++|+++ ++++ ++.....+. ...++.
T Consensus 1 mkI~vIG-lG~~G~~lA~~La~~G~-------~V~~~d~~~--~~v~----~l~~g~~~~~e~~l~~~~~~~~~~g~l~~ 66 (411)
T TIGR03026 1 MKIAVIG-LGYVGLPLAALLADLGH-------EVTGVDIDQ--EKVD----KLNKGKSPIYEPGLDELLAKALAAGRLRA 66 (411)
T ss_pred CEEEEEC-CCchhHHHHHHHHhcCC-------eEEEEECCH--HHHH----HhhcCCCCCCCCCHHHHHHHhhhcCCeEE
Confidence 5899999 79999999999999987 899999874 3332 222211110 123666
Q ss_pred eCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEc
Q 020875 72 TTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA 131 (320)
Q Consensus 72 ~~~~~~al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~s 131 (320)
+++..++++++|+||++...+...... .+...+...++.+.++..++..++..|
T Consensus 67 ~~~~~~~~~~advvii~vpt~~~~~~~------~d~~~v~~~~~~i~~~l~~g~lvi~~S 120 (411)
T TIGR03026 67 TTDYEDAIRDADVIIICVPTPLKEDGS------PDLSYVESAAETIAKHLRKGATVVLES 120 (411)
T ss_pred ECCHHHHHhhCCEEEEEeCCCCCCCCC------cChHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 777778899999999998776532211 122334444455554432444444444
No 180
>PRK12829 short chain dehydrogenase; Provisional
Probab=98.17 E-value=1.3e-05 Score=71.79 Aligned_cols=151 Identities=19% Similarity=0.229 Sum_probs=81.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhccc-CCCCcceEEeCChhh-----
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-FPLLKGVVATTDAVE----- 77 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~-~~~~~~v~~~~~~~~----- 77 (320)
+.++++|+||+|++|++++..|+++|+ +|+++++++ +.+.....++.+.. .....++....++.+
T Consensus 10 ~~~~vlItGa~g~iG~~~a~~L~~~g~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (264)
T PRK12829 10 DGLRVLVTGGASGIGRAIAEAFAEAGA-------RVHVCDVSE--AALAATAARLPGAKVTATVADVADPAQVERVFDTA 80 (264)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHH
Confidence 347999999999999999999999887 799999864 22222211221110 000111211111222
Q ss_pred --hcCCCcEEEEeCCCCCCCC----CCH---HHHHHhhHHHHHHHHHHHhhh---cCCCeEEEEEcCcchhhHHHHHHHC
Q 020875 78 --ACTGVNIAVMVGGFPRKEG----MER---KDVMSKNVSIYKAQASALEQH---AAPNCKVLVVANPANTNALILKEFA 145 (320)
Q Consensus 78 --al~~aDvVi~~ag~~~~~~----~~r---~~~~~~n~~~~~~i~~~i~~~---~~~~~~viv~snP~~~~~~~~~~~~ 145 (320)
.+.++|+|||.+|...... .+. .+.+..|......+.+.+.+. .....++++.|.-.. .
T Consensus 81 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~---------~ 151 (264)
T PRK12829 81 VERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAG---------R 151 (264)
T ss_pred HHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEeccccc---------c
Confidence 2357899999998652111 122 345667777766666655332 112134555553211 1
Q ss_pred CCCCCCcEEEeehhhHHHHHHHHHHHc
Q 020875 146 PSIPAKNITCLTRLDHNRALGQISEKL 172 (320)
Q Consensus 146 ~~~~~~~i~~~t~ld~~r~~~~~a~~l 172 (320)
.+++....++.++.....+...+++.+
T Consensus 152 ~~~~~~~~y~~~K~a~~~~~~~l~~~~ 178 (264)
T PRK12829 152 LGYPGRTPYAASKWAVVGLVKSLAIEL 178 (264)
T ss_pred cCCCCCchhHHHHHHHHHHHHHHHHHH
Confidence 233433345666555555666666665
No 181
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.16 E-value=3.5e-05 Score=68.67 Aligned_cols=151 Identities=18% Similarity=0.188 Sum_probs=83.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhh-----
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE----- 77 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~----- 77 (320)
++|+||||+|++|++++..|++.|. +|++++++.. +.......++...... ...+++...+..+
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~-------~vi~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 74 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGF-------DLAINDRPDD-EELAATQQELRALGVEVIFFPADVADLSAHEAMLDAA 74 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEecCch-hHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 4799999999999999999999886 7899987532 2222222222211111 0112222111111
Q ss_pred --hcCCCcEEEEeCCCCCCC-----CCC---HHHHHHhhHHHHHHHHHHHhhh----cC-C---CeEEEEEcCcchhhHH
Q 020875 78 --ACTGVNIAVMVGGFPRKE-----GME---RKDVMSKNVSIYKAQASALEQH----AA-P---NCKVLVVANPANTNAL 139 (320)
Q Consensus 78 --al~~aDvVi~~ag~~~~~-----~~~---r~~~~~~n~~~~~~i~~~i~~~----~~-~---~~~viv~snP~~~~~~ 139 (320)
.+...|+|||++|..... ..+ ..+.+..|+.....+.+.+.++ .. . ...++++|+....
T Consensus 75 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~--- 151 (256)
T PRK12745 75 QAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAI--- 151 (256)
T ss_pred HHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhc---
Confidence 224689999999874311 112 2345677887777776665443 11 1 2346666643211
Q ss_pred HHHHHCCCCCCCcEEEeehhhHHHHHHHHHHHcC
Q 020875 140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (320)
Q Consensus 140 ~~~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~ 173 (320)
.+.+..-.|+.++.....+-..+++.++
T Consensus 152 ------~~~~~~~~Y~~sK~a~~~~~~~l~~~~~ 179 (256)
T PRK12745 152 ------MVSPNRGEYCISKAGLSMAAQLFAARLA 179 (256)
T ss_pred ------cCCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 1223333566666655566666666543
No 182
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=98.16 E-value=1.3e-05 Score=71.85 Aligned_cols=146 Identities=16% Similarity=0.087 Sum_probs=81.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhh---
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA--- 78 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~a--- 78 (320)
.++++||||+|++|++++..|+++|. +|+++|+++. ......++...... ...++....+..+.
T Consensus 8 ~k~vlVtGas~gIG~~la~~l~~~G~-------~v~~~~r~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 77 (260)
T PRK12823 8 GKVVVVTGAAQGIGRGVALRAAAEGA-------RVVLVDRSEL---VHEVAAELRAAGGEALALTADLETYAGAQAAMAA 77 (260)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCchH---HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHH
Confidence 36899999999999999999999987 7999998631 22222222211100 01112111111222
Q ss_pred ----cCCCcEEEEeCCCCC--CC--CCCH---HHHHHhhHHH----HHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHH
Q 020875 79 ----CTGVNIAVMVGGFPR--KE--GMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKE 143 (320)
Q Consensus 79 ----l~~aDvVi~~ag~~~--~~--~~~r---~~~~~~n~~~----~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~ 143 (320)
+...|++|+.||... .+ ..+. ...+..|+.. ++.+.+.+++.. ..++|++|+...
T Consensus 78 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~iv~~sS~~~-------- 147 (260)
T PRK12823 78 AVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG--GGAIVNVSSIAT-------- 147 (260)
T ss_pred HHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CCeEEEEcCccc--------
Confidence 346899999998532 11 1122 2334556543 345555555543 246777765321
Q ss_pred HCCCCCCCcEEEeehhhHHHHHHHHHHHcC
Q 020875 144 FAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (320)
Q Consensus 144 ~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~ 173 (320)
+ + +..-.|+.++.-...+.+.+++.+.
T Consensus 148 ~--~-~~~~~Y~~sK~a~~~~~~~la~e~~ 174 (260)
T PRK12823 148 R--G-INRVPYSAAKGGVNALTASLAFEYA 174 (260)
T ss_pred c--C-CCCCccHHHHHHHHHHHHHHHHHhc
Confidence 0 1 1112477777766677777887764
No 183
>PRK05884 short chain dehydrogenase; Provisional
Probab=98.16 E-value=3.2e-05 Score=67.94 Aligned_cols=149 Identities=13% Similarity=0.109 Sum_probs=84.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhc----CC
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC----TG 81 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al----~~ 81 (320)
||+.|+||+|.+|++++..|++.|. +|+++++++ ++++....++. ......++....+..+++ +.
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~-------~v~~~~r~~--~~~~~~~~~~~--~~~~~~D~~~~~~v~~~~~~~~~~ 69 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGH-------KVTLVGARR--DDLEVAAKELD--VDAIVCDNTDPASLEEARGLFPHH 69 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHhcc--CcEEecCCCCHHHHHHHHHHHhhc
Confidence 5899999999999999999999886 789998863 33332222221 001112222222232222 25
Q ss_pred CcEEEEeCCCCCC---C--------CCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCC
Q 020875 82 VNIAVMVGGFPRK---E--------GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPA 150 (320)
Q Consensus 82 aDvVi~~ag~~~~---~--------~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~ 150 (320)
.|++|+.+|.... + .++....+..|+.....+.+.+...-.+.+.+|+++... .+.
T Consensus 70 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~-------------~~~ 136 (223)
T PRK05884 70 LDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN-------------PPA 136 (223)
T ss_pred CcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC-------------CCC
Confidence 8999999874210 0 011234567777666666666554321235677776422 111
Q ss_pred CcEEEeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 151 KNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 151 ~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
.-.|+.++---..+-+.+++.+. +..|+
T Consensus 137 ~~~Y~asKaal~~~~~~la~e~~--~~gI~ 164 (223)
T PRK05884 137 GSAEAAIKAALSNWTAGQAAVFG--TRGIT 164 (223)
T ss_pred ccccHHHHHHHHHHHHHHHHHhh--hcCeE
Confidence 12466666666667677777765 34555
No 184
>PRK07024 short chain dehydrogenase; Provisional
Probab=98.16 E-value=1.7e-05 Score=70.99 Aligned_cols=149 Identities=19% Similarity=0.214 Sum_probs=84.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhccc-C-CCCcceEEeCChhhhc---
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-F-PLLKGVVATTDAVEAC--- 79 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~-~-~~~~~v~~~~~~~~al--- 79 (320)
+++|+||||+|.+|.+++..|++.|. +|+++|++. ++++....++.... . ....+++...+..+++
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~ 72 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-------TLGLVARRT--DALQAFAARLPKAARVSVYAADVRDADALAAAAADF 72 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHH
Confidence 36899999999999999999999886 799999863 33433222222110 0 0112222222232322
Q ss_pred ----CCCcEEEEeCCCCCCCC----CC---HHHHHHhhHHHHHHHHH----HHhhhcCCCeEEEEEcCcchhhHHHHHHH
Q 020875 80 ----TGVNIAVMVGGFPRKEG----ME---RKDVMSKNVSIYKAQAS----ALEQHAAPNCKVLVVANPANTNALILKEF 144 (320)
Q Consensus 80 ----~~aDvVi~~ag~~~~~~----~~---r~~~~~~n~~~~~~i~~----~i~~~~~~~~~viv~snP~~~~~~~~~~~ 144 (320)
...|++|+.+|...... .+ ....+..|+.....+.+ .+++.. ...+|++|+-...
T Consensus 73 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~--~~~iv~isS~~~~-------- 142 (257)
T PRK07024 73 IAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR--RGTLVGIASVAGV-------- 142 (257)
T ss_pred HHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC--CCEEEEEechhhc--------
Confidence 23699999998743211 12 23456677766655444 555543 3566766643211
Q ss_pred CCCCCCCcEEEeehhhHHHHHHHHHHHcC
Q 020875 145 APSIPAKNITCLTRLDHNRALGQISEKLN 173 (320)
Q Consensus 145 ~~~~~~~~i~~~t~ld~~r~~~~~a~~l~ 173 (320)
.+.|..-.|+.++.....+-..++..+.
T Consensus 143 -~~~~~~~~Y~asK~a~~~~~~~l~~e~~ 170 (257)
T PRK07024 143 -RGLPGAGAYSASKAAAIKYLESLRVELR 170 (257)
T ss_pred -CCCCCCcchHHHHHHHHHHHHHHHHHhh
Confidence 1233333567776666666666666554
No 185
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=98.15 E-value=4.8e-05 Score=67.42 Aligned_cols=159 Identities=18% Similarity=0.116 Sum_probs=85.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhhc--
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEAC-- 79 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~al-- 79 (320)
.+++.|+||+|++|++++..|+.+|. ++++.+.+. .+.++....++.+.... ...++....+..+++
T Consensus 6 ~~~~lItG~s~~iG~~la~~l~~~g~-------~v~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~ 77 (247)
T PRK12935 6 GKVAIVTGGAKGIGKAITVALAQEGA-------KVVINYNSS-KEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEE 77 (247)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-------EEEEEcCCc-HHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence 46899999999999999999999886 666654432 23333333333322110 011222222222233
Q ss_pred -----CCCcEEEEeCCCCCCCC------CCHHHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEEcCcchhhHHHHHHHCC
Q 020875 80 -----TGVNIAVMVGGFPRKEG------MERKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEFAP 146 (320)
Q Consensus 80 -----~~aDvVi~~ag~~~~~~------~~r~~~~~~n~~~~~~i~~~i~~~~--~~~~~viv~snP~~~~~~~~~~~~~ 146 (320)
...|+|||+||...... ....+.+..|+.....+.+.+..+- ....+++++|+.... .
T Consensus 78 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~---------~ 148 (247)
T PRK12935 78 AVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQ---------A 148 (247)
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhc---------C
Confidence 34799999998743211 1234567788887777777766531 123467777653211 1
Q ss_pred CCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeee
Q 020875 147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182 (320)
Q Consensus 147 ~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~ 182 (320)
+.+....|+.++.....+-..+++.+. +..++..
T Consensus 149 ~~~~~~~Y~~sK~a~~~~~~~l~~~~~--~~~i~v~ 182 (247)
T PRK12935 149 GGFGQTNYSAAKAGMLGFTKSLALELA--KTNVTVN 182 (247)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHH--HcCcEEE
Confidence 222223456555443344444555542 3345543
No 186
>PRK08628 short chain dehydrogenase; Provisional
Probab=98.15 E-value=4.1e-05 Score=68.43 Aligned_cols=158 Identities=14% Similarity=0.067 Sum_probs=86.5
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhh
Q 020875 2 AKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA 78 (320)
Q Consensus 2 ~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~a 78 (320)
+.+.++++||||+|.+|.+++..|++.|. .+++.++++. .. ....++...... ...++....+..+.
T Consensus 4 ~l~~~~ilItGasggiG~~la~~l~~~G~-------~v~~~~r~~~--~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 73 (258)
T PRK08628 4 NLKDKVVIVTGGASGIGAAISLRLAEEGA-------IPVIFGRSAP--DD-EFAEELRALQPRAEFVQVDLTDDAQCRDA 73 (258)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHcCC-------cEEEEcCChh--hH-HHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence 33456999999999999999999999886 6888887642 22 122233221111 11222222222333
Q ss_pred c-------CCCcEEEEeCCCCCCCC-----CCHHHHHHhhHHHHHHHHHHHhhhcC-CCeEEEEEcCcchhhHHHHHHHC
Q 020875 79 C-------TGVNIAVMVGGFPRKEG-----MERKDVMSKNVSIYKAQASALEQHAA-PNCKVLVVANPANTNALILKEFA 145 (320)
Q Consensus 79 l-------~~aDvVi~~ag~~~~~~-----~~r~~~~~~n~~~~~~i~~~i~~~~~-~~~~viv~snP~~~~~~~~~~~~ 145 (320)
+ ...|+||+++|...... ++..+.+..|+.....+.+.+.++-. ....++++|.-...
T Consensus 74 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~--------- 144 (258)
T PRK08628 74 VEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTAL--------- 144 (258)
T ss_pred HHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhc---------
Confidence 3 35799999998643211 11234567787776666666554321 12456666542211
Q ss_pred CCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 146 PSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 146 ~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
.+.+...-|+.++.-...+.+.+++.+. +..|+
T Consensus 145 ~~~~~~~~Y~~sK~a~~~~~~~l~~e~~--~~~i~ 177 (258)
T PRK08628 145 TGQGGTSGYAAAKGAQLALTREWAVALA--KDGVR 177 (258)
T ss_pred cCCCCCchhHHHHHHHHHHHHHHHHHHh--hcCeE
Confidence 1122222456665555556666666554 34454
No 187
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.13 E-value=1.9e-05 Score=70.51 Aligned_cols=154 Identities=14% Similarity=0.116 Sum_probs=85.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC-CCCcceEEeCChhhh----
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVEA---- 78 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~~~~~~a---- 78 (320)
..++++||||+|.+|.+++..|++.|. +|++.+++. .+.++ ++.+... ....++....+..++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-------~v~~~~~~~-~~~~~----~l~~~~~~~~~~Dl~~~~~~~~~~~~~ 73 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-------KVAVLYNSA-ENEAK----ELREKGVFTIKCDVGNRDQVKKSKEVV 73 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCc-HHHHH----HHHhCCCeEEEecCCCHHHHHHHHHHH
Confidence 347899999999999999999999886 777776542 11111 1211110 011122111122222
Q ss_pred ---cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHH----HHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHC
Q 020875 79 ---CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKEFA 145 (320)
Q Consensus 79 ---l~~aDvVi~~ag~~~~~---~~~---r~~~~~~n~~~----~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~ 145 (320)
+...|+||+++|..... ..+ ....+..|+.. ++.+++.+++.. .+.+|++|+.... .
T Consensus 74 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~--~g~iv~isS~~~~--------~ 143 (255)
T PRK06463 74 EKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK--NGAIVNIASNAGI--------G 143 (255)
T ss_pred HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC--CcEEEEEcCHHhC--------C
Confidence 34689999999874321 112 22356677766 466666665432 3567777753211 0
Q ss_pred CCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 146 PSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 146 ~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
...+..-.|+.++.-...+-+.+++.+. +..|+.
T Consensus 144 ~~~~~~~~Y~asKaa~~~~~~~la~e~~--~~~i~v 177 (255)
T PRK06463 144 TAAEGTTFYAITKAGIIILTRRLAFELG--KYGIRV 177 (255)
T ss_pred CCCCCccHhHHHHHHHHHHHHHHHHHhh--hcCeEE
Confidence 1111112467666666666666777654 455663
No 188
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.13 E-value=1.2e-05 Score=70.79 Aligned_cols=124 Identities=15% Similarity=0.150 Sum_probs=67.7
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC--CCCcceEEeCChhhh
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF--PLLKGVVATTDAVEA 78 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~--~~~~~v~~~~~~~~a 78 (320)
|..+..+|.|+||+|++|++++..|++.|. +|++.++++ +.+.....++.+... ....++....+..+.
T Consensus 1 ~~~~~~~vlItGa~g~iG~~~a~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 71 (238)
T PRK05786 1 MRLKGKKVAIIGVSEGLGYAVAYFALKEGA-------QVCINSRNE--NKLKRMKKTLSKYGNIHYVVGDVSSTESARNV 71 (238)
T ss_pred CCcCCcEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEECCCCCHHHHHHH
Confidence 555567999999999999999999999887 899999864 333222222222110 011222222222222
Q ss_pred -------cCCCcEEEEeCCCCCCCC-CCH---HHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q 020875 79 -------CTGVNIAVMVGGFPRKEG-MER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANP 133 (320)
Q Consensus 79 -------l~~aDvVi~~ag~~~~~~-~~r---~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP 133 (320)
+...|.+|+++|...... .+. ...+..|+.....+++.+.+.-.++..+|++|+.
T Consensus 72 ~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~ 137 (238)
T PRK05786 72 IEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSM 137 (238)
T ss_pred HHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecc
Confidence 234699999887532111 111 2234555555444444444332123456777754
No 189
>PRK06701 short chain dehydrogenase; Provisional
Probab=98.13 E-value=6.5e-05 Score=68.78 Aligned_cols=159 Identities=13% Similarity=0.100 Sum_probs=88.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhhc--
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEAC-- 79 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~al-- 79 (320)
.++|.|+||+|++|++++..|++.|. +|++++++++ ..+......+...... ...++....+..+.+
T Consensus 46 ~k~iLItGasggIG~~la~~l~~~G~-------~V~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 117 (290)
T PRK06701 46 GKVALITGGDSGIGRAVAVLFAKEGA-------DIAIVYLDEH-EDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEE 117 (290)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCcc-hHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence 46899999999999999999999886 8899988642 1222222222211100 111221111222222
Q ss_pred -----CCCcEEEEeCCCCCC--C--CCC---HHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCC
Q 020875 80 -----TGVNIAVMVGGFPRK--E--GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS 147 (320)
Q Consensus 80 -----~~aDvVi~~ag~~~~--~--~~~---r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~ 147 (320)
...|+||+.||.... + ..+ ..+.+..|+.....+++.+.+.-.+...+|++|+-... .+
T Consensus 118 i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~---------~~ 188 (290)
T PRK06701 118 TVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGY---------EG 188 (290)
T ss_pred HHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEeccccc---------CC
Confidence 357999999986421 1 112 23467888888888888887642234567777653211 11
Q ss_pred CCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeee
Q 020875 148 IPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182 (320)
Q Consensus 148 ~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~ 182 (320)
.+..--|+.++.-...+-..+++.+. +..|+..
T Consensus 189 ~~~~~~Y~~sK~a~~~l~~~la~~~~--~~gIrv~ 221 (290)
T PRK06701 189 NETLIDYSATKGAIHAFTRSLAQSLV--QKGIRVN 221 (290)
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHhh--hcCeEEE
Confidence 12111244444433455555666654 3456543
No 190
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=98.12 E-value=2.6e-05 Score=69.65 Aligned_cols=156 Identities=10% Similarity=0.089 Sum_probs=87.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhh--
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA-- 78 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~a-- 78 (320)
+.+++.||||+|.+|.+++..|++.|. +|+++++++. +.+.. .+...... ...++....+..+.
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-------~vv~~~~~~~-~~~~~---~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 75 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-------DIVGVGVAEA-PETQA---QVEALGRKFHFITADLIQQKDIDSIVS 75 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEecCchH-HHHHH---HHHHcCCeEEEEEeCCCCHHHHHHHHH
Confidence 446899999999999999999999987 7888887531 22211 12111100 11122222222222
Q ss_pred -----cCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHH----HhhhcCCCeEEEEEcCcchhhHHHHHH
Q 020875 79 -----CTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASA----LEQHAAPNCKVLVVANPANTNALILKE 143 (320)
Q Consensus 79 -----l~~aDvVi~~ag~~~~~~---~~---r~~~~~~n~~~~~~i~~~----i~~~~~~~~~viv~snP~~~~~~~~~~ 143 (320)
+...|++|+.||...... .+ ....+..|+.....+.+. +.+.. ..+++|++|+....
T Consensus 76 ~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-~~g~ii~isS~~~~------- 147 (251)
T PRK12481 76 QAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQG-NGGKIINIASMLSF------- 147 (251)
T ss_pred HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcC-CCCEEEEeCChhhc-------
Confidence 345799999998743211 12 234566776655544444 43332 23577777754321
Q ss_pred HCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeee
Q 020875 144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182 (320)
Q Consensus 144 ~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~ 182 (320)
.+.+..-.|+.++.-...+-+.+|..+. +..|+..
T Consensus 148 --~~~~~~~~Y~asK~a~~~l~~~la~e~~--~~girvn 182 (251)
T PRK12481 148 --QGGIRVPSYTASKSAVMGLTRALATELS--QYNINVN 182 (251)
T ss_pred --CCCCCCcchHHHHHHHHHHHHHHHHHHh--hcCeEEE
Confidence 1122222567777666677777777764 4456533
No 191
>PRK05876 short chain dehydrogenase; Provisional
Probab=98.12 E-value=3.9e-05 Score=69.71 Aligned_cols=149 Identities=14% Similarity=0.093 Sum_probs=82.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhh---
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA--- 78 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~a--- 78 (320)
.+.++||||+|++|++++..|+.+|. +|++.|+++ +.++....++...... ...++....+..+.
T Consensus 6 ~k~vlVTGas~gIG~ala~~La~~G~-------~Vv~~~r~~--~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~ 76 (275)
T PRK05876 6 GRGAVITGGASGIGLATGTEFARRGA-------RVVLGDVDK--PGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADE 76 (275)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence 45799999999999999999999987 799999864 3344333333321100 11222222222222
Q ss_pred ----cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHh----hhcCCCeEEEEEcCcchhhHHHHHHH
Q 020875 79 ----CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALE----QHAAPNCKVLVVANPANTNALILKEF 144 (320)
Q Consensus 79 ----l~~aDvVi~~ag~~~~~---~~~---r~~~~~~n~~~~~~i~~~i~----~~~~~~~~viv~snP~~~~~~~~~~~ 144 (320)
+...|++|+.||..... ..+ ....+..|+.....+.+.+. +.+ ..+.+|++|+-...
T Consensus 77 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~-~~g~iv~isS~~~~-------- 147 (275)
T PRK05876 77 AFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQG-TGGHVVFTASFAGL-------- 147 (275)
T ss_pred HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCCEEEEeCChhhc--------
Confidence 23579999999874311 122 23456777776666655543 332 23567777653211
Q ss_pred CCCCCCCcEEEeehhhHHHHHHHHHHHc
Q 020875 145 APSIPAKNITCLTRLDHNRALGQISEKL 172 (320)
Q Consensus 145 ~~~~~~~~i~~~t~ld~~r~~~~~a~~l 172 (320)
.+.|..-.|+.++.-...+-..++..+
T Consensus 148 -~~~~~~~~Y~asK~a~~~~~~~l~~e~ 174 (275)
T PRK05876 148 -VPNAGLGAYGVAKYGVVGLAETLAREV 174 (275)
T ss_pred -cCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence 122222245656554444455555554
No 192
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=98.12 E-value=3.7e-05 Score=78.97 Aligned_cols=146 Identities=17% Similarity=0.242 Sum_probs=95.0
Q ss_pred CEEEEEcCCChhHHHHHHHHH-hcCcCCCCCCeEEEEEecCCccchhHH---HHHHHhcc-----c-C-----CCCcceE
Q 020875 6 VRVLVTGAAGQIGYALVPMIA-RGVMLGTDQPVILHMLDIPPAAEALNG---VKMELVDA-----A-F-----PLLKGVV 70 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~-~~~~~~~~~~~ev~l~D~~~~~~~~~~---~~~dl~~~-----~-~-----~~~~~v~ 70 (320)
.||+|+| +|.+|..++..++ ..|+ +|+|+|.++ +.+.. ...+..+. . . ....+++
T Consensus 310 ~~v~ViG-aG~mG~giA~~~a~~~G~-------~V~l~d~~~--~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~ 379 (708)
T PRK11154 310 NKVGVLG-GGLMGGGIAYVTATKAGL-------PVRIKDINP--QGINHALKYSWDLLDKKVKRRHLKPSERDKQMALIS 379 (708)
T ss_pred cEEEEEC-CchhhHHHHHHHHHHcCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhcEE
Confidence 6999999 5999999999988 7787 899999974 22211 11111110 0 0 0135688
Q ss_pred EeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchh-hHHHHHHHCCCC-
Q 020875 71 ATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT-NALILKEFAPSI- 148 (320)
Q Consensus 71 ~~~~~~~al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~-~~~~~~~~~~~~- 148 (320)
.++++ +++++||+||-+. -+|.+.-+++...++++++|++ |+.||.+.+ ++.+... ...
T Consensus 380 ~~~~~-~~~~~aDlViEav--------------~E~~~~K~~v~~~le~~~~~~~--ilasnTS~l~i~~la~~--~~~p 440 (708)
T PRK11154 380 GTTDY-RGFKHADVVIEAV--------------FEDLALKQQMVAEVEQNCAPHT--IFASNTSSLPIGQIAAA--AARP 440 (708)
T ss_pred EeCCh-HHhccCCEEeecc--------------cccHHHHHHHHHHHHhhCCCCc--EEEECCCCCCHHHHHHh--cCcc
Confidence 88776 7899999999874 2345677899999999987775 567887765 3444332 122
Q ss_pred ----------CCC--c---EE--EeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 149 ----------PAK--N---IT--CLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 149 ----------~~~--~---i~--~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
|++ + |+ -.|.-++......+++.+|..|.-++
T Consensus 441 ~r~ig~Hff~P~~~~~lVEvv~g~~Ts~~~~~~~~~~~~~~gk~pv~v~ 489 (708)
T PRK11154 441 EQVIGLHYFSPVEKMPLVEVIPHAKTSAETIATTVALAKKQGKTPIVVR 489 (708)
T ss_pred cceEEEecCCccccCceEEEECCCCCCHHHHHHHHHHHHHcCCceEEEe
Confidence 222 1 22 23566665666667788887665444
No 193
>PRK12939 short chain dehydrogenase; Provisional
Probab=98.12 E-value=3.5e-05 Score=68.30 Aligned_cols=157 Identities=16% Similarity=0.099 Sum_probs=87.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhh---
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA--- 78 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~a--- 78 (320)
.++++|+||+|.+|++++..|+++|+ +++++++++ +++.....++...... ...++....+..+.
T Consensus 7 ~~~vlItGa~g~iG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 77 (250)
T PRK12939 7 GKRALVTGAARGLGAAFAEALAEAGA-------TVAFNDGLA--AEARELAAALEAAGGRAHAIAADLADPASVQRFFDA 77 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence 47999999999999999999999887 788888764 3333333333221110 11122222222222
Q ss_pred ----cCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHHhhhcC--CCeEEEEEcCcchhhHHHHHHHCC
Q 020875 79 ----CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHAA--PNCKVLVVANPANTNALILKEFAP 146 (320)
Q Consensus 79 ----l~~aDvVi~~ag~~~~~---~~~r---~~~~~~n~~~~~~i~~~i~~~~~--~~~~viv~snP~~~~~~~~~~~~~ 146 (320)
+.+.|+||+++|..... ..+. ...+..|......+.+.+.++.. ...++|++|+.... .
T Consensus 78 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~---------~ 148 (250)
T PRK12939 78 AAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTAL---------W 148 (250)
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhc---------c
Confidence 25789999999874321 1122 23456777777777666654311 23577777753211 1
Q ss_pred CCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 147 ~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
+.+..-.++.++.-..++.+.+++.+.- ..|+.
T Consensus 149 ~~~~~~~y~~sK~~~~~~~~~l~~~~~~--~~i~v 181 (250)
T PRK12939 149 GAPKLGAYVASKGAVIGMTRSLARELGG--RGITV 181 (250)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHhh--hCEEE
Confidence 1221123455555555666666666542 34553
No 194
>PRK06924 short chain dehydrogenase; Provisional
Probab=98.12 E-value=9.6e-06 Score=72.14 Aligned_cols=159 Identities=9% Similarity=0.045 Sum_probs=84.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC-CCCcceEEeCChhhhcCC---
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVEACTG--- 81 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~~~~~~al~~--- 81 (320)
++|+|+||+|++|++++..|+++|. +|++++++++ +.+....... .... ....++....+..+.++.
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~-------~V~~~~r~~~-~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~ 72 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGT-------HVISISRTEN-KELTKLAEQY-NSNLTFHSLDLQDVHELETNFNEILS 72 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCC-------EEEEEeCCch-HHHHHHHhcc-CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 4799999999999999999999886 7888988642 2222111100 0000 011222222222222221
Q ss_pred --------CcEEEEeCCCCCC---C-CCCHH---HHHHhhHHH----HHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHH
Q 020875 82 --------VNIAVMVGGFPRK---E-GMERK---DVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILK 142 (320)
Q Consensus 82 --------aDvVi~~ag~~~~---~-~~~r~---~~~~~n~~~----~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~ 142 (320)
.+++|+.+|.... . ..+.. ..+..|+.. ++.+.+.+++.. ...+++++|+...
T Consensus 73 ~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~~iv~~sS~~~------- 144 (251)
T PRK06924 73 SIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWK-VDKRVINISSGAA------- 144 (251)
T ss_pred hcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccC-CCceEEEecchhh-------
Confidence 1267888876421 1 11222 234445544 445555555432 2346677665321
Q ss_pred HHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeeeE
Q 020875 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVI 183 (320)
Q Consensus 143 ~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~ 183 (320)
...++....|+.++.-...+.+.+|..++..+..|+...
T Consensus 145 --~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~ 183 (251)
T PRK06924 145 --KNPYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVA 183 (251)
T ss_pred --cCCCCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEE
Confidence 122333335677666666777777877765556676544
No 195
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=98.12 E-value=2.5e-05 Score=69.68 Aligned_cols=152 Identities=11% Similarity=0.116 Sum_probs=83.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhhc-
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEAC- 79 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~al- 79 (320)
+.++|+|+||+|++|++++..|++.|. .|+++++++ +.+.....++...... ...++....+..+++
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 80 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-------HVLVNGRNA--ATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFA 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-------eEEEEeCCH--HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence 457999999999999999999999886 799999864 3333333333221110 111222222222222
Q ss_pred ------CCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEEcCcchhhHHHHHHHC
Q 020875 80 ------TGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEFA 145 (320)
Q Consensus 80 ------~~aDvVi~~ag~~~~~---~~~---r~~~~~~n~~~~~~i~~~i~~~~--~~~~~viv~snP~~~~~~~~~~~~ 145 (320)
...|+||+.+|..... ..+ ..+.+..|+.....+.+.+.+.- .....+|++|+....
T Consensus 81 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~--------- 151 (256)
T PRK06124 81 RIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQ--------- 151 (256)
T ss_pred HHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhc---------
Confidence 3469999999864321 112 23456777776666665554321 023567777754321
Q ss_pred CCCCCCcEEEeehhhHHHHHHHHHHHcC
Q 020875 146 PSIPAKNITCLTRLDHNRALGQISEKLN 173 (320)
Q Consensus 146 ~~~~~~~i~~~t~ld~~r~~~~~a~~l~ 173 (320)
.+.+..-.++.++.....+...+++.++
T Consensus 152 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~ 179 (256)
T PRK06124 152 VARAGDAVYPAAKQGLTGLMRALAAEFG 179 (256)
T ss_pred cCCCCccHhHHHHHHHHHHHHHHHHHHH
Confidence 1122112345554444444455566554
No 196
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=98.12 E-value=2.7e-05 Score=69.22 Aligned_cols=116 Identities=19% Similarity=0.200 Sum_probs=67.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeC-------Ch
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATT-------DA 75 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~-------~~ 75 (320)
++|+|+||+|++|++++..|+++|+ +|++++++. +..+....++...... ...++.... ..
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 72 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGA-------NVVVNDLGE--AGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAA 72 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence 4799999999999999999999887 899999864 2222222222211111 011222211 22
Q ss_pred hhhcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHH----hhhcCCCeEEEEEcC
Q 020875 76 VEACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASAL----EQHAAPNCKVLVVAN 132 (320)
Q Consensus 76 ~~al~~aDvVi~~ag~~~~~---~~~---r~~~~~~n~~~~~~i~~~i----~~~~~~~~~viv~sn 132 (320)
.+.+.+.|+|||.++..... ..+ ..+.+..|......+.+.+ ++.. ..+++++|+
T Consensus 73 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~--~~~~v~~ss 137 (255)
T TIGR01963 73 AAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG--WGRIINIAS 137 (255)
T ss_pred HHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CeEEEEEcc
Confidence 33456789999999864321 111 2234556777666666555 4432 235666664
No 197
>PRK08226 short chain dehydrogenase; Provisional
Probab=98.12 E-value=3.4e-05 Score=69.12 Aligned_cols=157 Identities=18% Similarity=0.212 Sum_probs=86.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhh--
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA-- 78 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~a-- 78 (320)
+.++++|+||+|++|++++..|+++|. +|+++++++. .......+...... ...++....+..+.
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-------~Vv~~~r~~~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~ 74 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-------NLILLDISPE---IEKLADELCGRGHRCTAVVADVRDPASVAAAIK 74 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEecCCHH---HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHH
Confidence 457999999999999999999999887 7999998641 22122222111101 01122211122222
Q ss_pred -----cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEEcCcchhhHHHHHHHC
Q 020875 79 -----CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEFA 145 (320)
Q Consensus 79 -----l~~aDvVi~~ag~~~~~---~~~---r~~~~~~n~~~~~~i~~~i~~~~--~~~~~viv~snP~~~~~~~~~~~~ 145 (320)
+...|+||+.+|..... ..+ ..+.+..|+.....+.+.+.++. .....++++|+.... .
T Consensus 75 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~-------~- 146 (263)
T PRK08226 75 RAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGD-------M- 146 (263)
T ss_pred HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhc-------c-
Confidence 34679999999864211 111 23356778877776666655431 123467777653210 0
Q ss_pred CCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 146 PSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 146 ~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
...+..-.|+.++.-...+-..+++.+. +..++
T Consensus 147 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~--~~~i~ 179 (263)
T PRK08226 147 VADPGETAYALTKAAIVGLTKSLAVEYA--QSGIR 179 (263)
T ss_pred cCCCCcchHHHHHHHHHHHHHHHHHHhc--ccCcE
Confidence 1112222466666555566667777764 33454
No 198
>PRK07060 short chain dehydrogenase; Provisional
Probab=98.12 E-value=1.2e-05 Score=71.08 Aligned_cols=149 Identities=20% Similarity=0.153 Sum_probs=84.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhc---CC
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC---TG 81 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al---~~ 81 (320)
.++++|+||+|++|.+++..|++.|+ +|++++++. +++......+. .. ....++....+..+++ ..
T Consensus 9 ~~~~lItGa~g~iG~~~a~~l~~~g~-------~V~~~~r~~--~~~~~~~~~~~-~~-~~~~D~~~~~~v~~~~~~~~~ 77 (245)
T PRK07060 9 GKSVLVTGASSGIGRACAVALAQRGA-------RVVAAARNA--AALDRLAGETG-CE-PLRLDVGDDAAIRAALAAAGA 77 (245)
T ss_pred CCEEEEeCCcchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhC-Ce-EEEecCCCHHHHHHHHHHhCC
Confidence 46999999999999999999999886 799999863 23322111110 00 0011221111223333 35
Q ss_pred CcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHhhhcC---CCeEEEEEcCcchhhHHHHHHHCCCCCCCc
Q 020875 82 VNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHAA---PNCKVLVVANPANTNALILKEFAPSIPAKN 152 (320)
Q Consensus 82 aDvVi~~ag~~~~~---~~~---r~~~~~~n~~~~~~i~~~i~~~~~---~~~~viv~snP~~~~~~~~~~~~~~~~~~~ 152 (320)
.|+||+.+|..... ..+ ..+.+..|+.....+.+.+.+... ...++|++|+.... .+.+...
T Consensus 78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~---------~~~~~~~ 148 (245)
T PRK07060 78 FDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAAL---------VGLPDHL 148 (245)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHc---------CCCCCCc
Confidence 89999999874321 112 233566788877777777665421 12466776643211 1222222
Q ss_pred EEEeehhhHHHHHHHHHHHcC
Q 020875 153 ITCLTRLDHNRALGQISEKLN 173 (320)
Q Consensus 153 i~~~t~ld~~r~~~~~a~~l~ 173 (320)
.++.++.-..++...+++.+.
T Consensus 149 ~y~~sK~a~~~~~~~~a~~~~ 169 (245)
T PRK07060 149 AYCASKAALDAITRVLCVELG 169 (245)
T ss_pred HhHHHHHHHHHHHHHHHHHHh
Confidence 456666656666666777653
No 199
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.11 E-value=2.6e-05 Score=72.23 Aligned_cols=78 Identities=17% Similarity=0.256 Sum_probs=52.2
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhccc---C------CCCcceEE
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA---F------PLLKGVVA 71 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~---~------~~~~~v~~ 71 (320)
|+ +.+||+|+| +|.+|..++..|+..|+ +|+++|+++ +.++.....+.+.. . .....++.
T Consensus 1 ~~-~~~~I~vIG-aG~mG~~iA~~l~~~g~-------~V~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 69 (311)
T PRK06130 1 MN-PIQNLAIIG-AGTMGSGIAALFARKGL-------QVVLIDVME--GALERARGVIERALGVYAPLGIASAGMGRIRM 69 (311)
T ss_pred CC-CccEEEEEC-CCHHHHHHHHHHHhCCC-------eEEEEECCH--HHHHHHHHHHHHHHHHhhhcccHHHHhhceEE
Confidence 44 356999999 69999999999999887 899999864 33322111111000 0 01123556
Q ss_pred eCChhhhcCCCcEEEEeC
Q 020875 72 TTDAVEACTGVNIAVMVG 89 (320)
Q Consensus 72 ~~~~~~al~~aDvVi~~a 89 (320)
+++..+++++||+||.+.
T Consensus 70 ~~~~~~~~~~aDlVi~av 87 (311)
T PRK06130 70 EAGLAAAVSGADLVIEAV 87 (311)
T ss_pred eCCHHHHhccCCEEEEec
Confidence 667777899999999985
No 200
>PRK08219 short chain dehydrogenase; Provisional
Probab=98.11 E-value=1.7e-05 Score=69.16 Aligned_cols=115 Identities=21% Similarity=0.229 Sum_probs=65.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcC---C
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT---G 81 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~---~ 81 (320)
+++++|+||+|++|++++..|+++ + +|++++++. +.+.....++.+. .....++....++.++++ +
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~-------~V~~~~r~~--~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~ 71 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-H-------TLLLGGRPA--ERLDELAAELPGA-TPFPVDLTDPEAIAAAVEQLGR 71 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-C-------CEEEEeCCH--HHHHHHHHHhccc-eEEecCCCCHHHHHHHHHhcCC
Confidence 468999999999999999999987 5 789999863 2222111111110 011123332334444454 5
Q ss_pred CcEEEEeCCCCCCCC---CC---HHHHHHhhHHH----HHHHHHHHhhhcCCCeEEEEEcCc
Q 020875 82 VNIAVMVGGFPRKEG---ME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANP 133 (320)
Q Consensus 82 aDvVi~~ag~~~~~~---~~---r~~~~~~n~~~----~~~i~~~i~~~~~~~~~viv~snP 133 (320)
.|+|||++|...... .+ ..+.+..|... .+.+.+.+++.. .+++++|+.
T Consensus 72 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~v~~ss~ 130 (227)
T PRK08219 72 LDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH---GHVVFINSG 130 (227)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC---CeEEEEcch
Confidence 899999998743211 11 22345666666 444444444432 456666643
No 201
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=98.11 E-value=3.5e-05 Score=68.87 Aligned_cols=148 Identities=11% Similarity=0.094 Sum_probs=80.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC-----CCCcceEEeCChhhh--
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-----PLLKGVVATTDAVEA-- 78 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~-----~~~~~v~~~~~~~~a-- 78 (320)
++|+|+||+|++|++++..|+++|. +|+++|++. +.+.....++..... ....+++...+...+
T Consensus 3 k~ilItG~~~~IG~~la~~l~~~g~-------~vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~ 73 (259)
T PRK12384 3 QVAVVIGGGQTLGAFLCHGLAEEGY-------RVAVADINS--EKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSR 73 (259)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHH
Confidence 4799999999999999999999886 899999864 223322222321110 001122211112222
Q ss_pred -----cCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHH----HHHHhhhcCCCeEEEEEcCcchhhHHHHHH
Q 020875 79 -----CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQ----ASALEQHAAPNCKVLVVANPANTNALILKE 143 (320)
Q Consensus 79 -----l~~aDvVi~~ag~~~~~---~~~r---~~~~~~n~~~~~~i----~~~i~~~~~~~~~viv~snP~~~~~~~~~~ 143 (320)
+...|+||++||.+... ..+. ...+..|+.....+ .+.+.+.. ++.++|++|+....
T Consensus 74 ~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~iv~~ss~~~~------- 145 (259)
T PRK12384 74 GVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDG-IQGRIIQINSKSGK------- 145 (259)
T ss_pred HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCC-CCcEEEEecCcccc-------
Confidence 24679999999875421 1222 23456777664444 44444332 24567777764311
Q ss_pred HCCCCCCCcEEEeehhhHHHHHHHHHHHc
Q 020875 144 FAPSIPAKNITCLTRLDHNRALGQISEKL 172 (320)
Q Consensus 144 ~~~~~~~~~i~~~t~ld~~r~~~~~a~~l 172 (320)
.+.+..-.|+.++.....+...+++.+
T Consensus 146 --~~~~~~~~Y~~sKaa~~~l~~~la~e~ 172 (259)
T PRK12384 146 --VGSKHNSGYSAAKFGGVGLTQSLALDL 172 (259)
T ss_pred --cCCCCCchhHHHHHHHHHHHHHHHHHH
Confidence 111222245666655445555566554
No 202
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.11 E-value=3.4e-05 Score=70.76 Aligned_cols=99 Identities=16% Similarity=0.197 Sum_probs=61.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHh--------cccCC------CCcceE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELV--------DAAFP------LLKGVV 70 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~--------~~~~~------~~~~v~ 70 (320)
.+||+|+| +|.+|..++..|+..|+ +|.++|+++ +.++.....+. ....+ ....++
T Consensus 4 ~~kI~vIG-aG~mG~~iA~~la~~G~-------~V~l~d~~~--~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~ 73 (292)
T PRK07530 4 IKKVGVIG-AGQMGNGIAHVCALAGY-------DVLLNDVSA--DRLEAGLATINGNLARQVAKGKISEEARAAALARIS 73 (292)
T ss_pred CCEEEEEC-CcHHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeE
Confidence 46999999 59999999999999987 899999874 33322111111 11000 013466
Q ss_pred EeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEE
Q 020875 71 ATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVL 128 (320)
Q Consensus 71 ~~~~~~~al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~vi 128 (320)
.++++ +++++||+||.+.. . . ....+.+.+.+.++.+++++++
T Consensus 74 ~~~~~-~~~~~aD~Vieavp--e-----~-------~~~k~~~~~~l~~~~~~~~ii~ 116 (292)
T PRK07530 74 TATDL-EDLADCDLVIEAAT--E-----D-------ETVKRKIFAQLCPVLKPEAILA 116 (292)
T ss_pred eeCCH-HHhcCCCEEEEcCc--C-----C-------HHHHHHHHHHHHhhCCCCcEEE
Confidence 66665 67899999999752 1 0 1222344556666665665443
No 203
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=98.11 E-value=2.1e-05 Score=74.29 Aligned_cols=103 Identities=14% Similarity=0.102 Sum_probs=65.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC-CCCcceEEeCChhhhcCCCc
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVEACTGVN 83 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~~~~~~al~~aD 83 (320)
||||+|+| +|+||+.++..|++++-. +|.+.|++. +++... .+..+... ...-++.....+.+++++.|
T Consensus 1 m~~ilviG-aG~Vg~~va~~la~~~d~------~V~iAdRs~--~~~~~i-~~~~~~~v~~~~vD~~d~~al~~li~~~d 70 (389)
T COG1748 1 MMKILVIG-AGGVGSVVAHKLAQNGDG------EVTIADRSK--EKCARI-AELIGGKVEALQVDAADVDALVALIKDFD 70 (389)
T ss_pred CCcEEEEC-CchhHHHHHHHHHhCCCc------eEEEEeCCH--HHHHHH-HhhccccceeEEecccChHHHHHHHhcCC
Confidence 57999999 599999999999998742 899999973 333322 12211110 11123333345778899999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchh
Q 020875 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136 (320)
Q Consensus 84 vVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~ 136 (320)
+||+++.... ...+++++.+.+ .-++-.|+-.+.
T Consensus 71 ~VIn~~p~~~----------------~~~i~ka~i~~g---v~yvDts~~~~~ 104 (389)
T COG1748 71 LVINAAPPFV----------------DLTILKACIKTG---VDYVDTSYYEEP 104 (389)
T ss_pred EEEEeCCchh----------------hHHHHHHHHHhC---CCEEEcccCCch
Confidence 9999975321 135666776665 336666654433
No 204
>PRK06101 short chain dehydrogenase; Provisional
Probab=98.11 E-value=2.9e-05 Score=68.84 Aligned_cols=149 Identities=16% Similarity=0.144 Sum_probs=87.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcC----C
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT----G 81 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~----~ 81 (320)
.+++||||+|++|.+++..|+.+|. +|+++++++ ++++.......+. .....++....+..++++ .
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~ 71 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-------QVIACGRNQ--SVLDELHTQSANI-FTLAFDVTDHPGTKAALSQLPFI 71 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-------EEEEEECCH--HHHHHHHHhcCCC-eEEEeeCCCHHHHHHHHHhcccC
Confidence 5799999999999999999999887 899999863 3333221111100 011122222223333333 2
Q ss_pred CcEEEEeCCCCCC-C--CCCH---HHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCCcEEE
Q 020875 82 VNIAVMVGGFPRK-E--GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC 155 (320)
Q Consensus 82 aDvVi~~ag~~~~-~--~~~r---~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~i~~ 155 (320)
.|.+|+.+|.... + ..+. .+.+..|+.....+.+.+..+-.+..+++++|+.... .+.|....|+
T Consensus 72 ~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~---------~~~~~~~~Y~ 142 (240)
T PRK06101 72 PELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASE---------LALPRAEAYG 142 (240)
T ss_pred CCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhc---------cCCCCCchhh
Confidence 5788888875321 1 1122 3467889988888888877642133456666643211 1233333577
Q ss_pred eehhhHHHHHHHHHHHcC
Q 020875 156 LTRLDHNRALGQISEKLN 173 (320)
Q Consensus 156 ~t~ld~~r~~~~~a~~l~ 173 (320)
.++.....+.+.++..+.
T Consensus 143 asK~a~~~~~~~l~~e~~ 160 (240)
T PRK06101 143 ASKAAVAYFARTLQLDLR 160 (240)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 777766677666765553
No 205
>PRK06196 oxidoreductase; Provisional
Probab=98.11 E-value=3.1e-05 Score=71.71 Aligned_cols=162 Identities=10% Similarity=0.044 Sum_probs=88.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhh-------
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVE------- 77 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~------- 77 (320)
.++|+||||+|++|.+++..|+++|+ +|++.++++ ++++....++.... ....++....+..+
T Consensus 26 ~k~vlITGasggIG~~~a~~L~~~G~-------~Vv~~~R~~--~~~~~~~~~l~~v~-~~~~Dl~d~~~v~~~~~~~~~ 95 (315)
T PRK06196 26 GKTAIVTGGYSGLGLETTRALAQAGA-------HVIVPARRP--DVAREALAGIDGVE-VVMLDLADLESVRAFAERFLD 95 (315)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhhhCe-EEEccCCCHHHHHHHHHHHHh
Confidence 36899999999999999999999987 799999864 33332222222110 01112222112211
Q ss_pred hcCCCcEEEEeCCCCCCCC----CCHHHHHHhhHHH----HHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHH---HCC
Q 020875 78 ACTGVNIAVMVGGFPRKEG----MERKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKE---FAP 146 (320)
Q Consensus 78 al~~aDvVi~~ag~~~~~~----~~r~~~~~~n~~~----~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~---~~~ 146 (320)
.+.+.|++|+.||....+. ...+..+..|... ++.+.+.+++.+ .+++|++|+........... ...
T Consensus 96 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~--~~~iV~vSS~~~~~~~~~~~~~~~~~ 173 (315)
T PRK06196 96 SGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA--GARVVALSSAGHRRSPIRWDDPHFTR 173 (315)
T ss_pred cCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC--CCeEEEECCHHhccCCCCccccCccC
Confidence 1346899999998643211 1234456677666 455555555542 35777777532111000000 001
Q ss_pred CCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 147 ~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
.+++...|+.++.....+...+++.+. +..|+
T Consensus 174 ~~~~~~~Y~~SK~a~~~~~~~la~~~~--~~gi~ 205 (315)
T PRK06196 174 GYDKWLAYGQSKTANALFAVHLDKLGK--DQGVR 205 (315)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHhc--CCCcE
Confidence 122222466666666667777777664 33455
No 206
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=98.11 E-value=1.4e-05 Score=74.24 Aligned_cols=120 Identities=13% Similarity=0.022 Sum_probs=69.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhhc-
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEAC- 79 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~al- 79 (320)
..++|+||||+|+||.+++..|+..|. +|++.+++. +++.....++...... ...++....+..+++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~ 75 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-------HVIMACRNL--KKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVD 75 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHH
Confidence 456899999999999999999999886 799999863 3333333333211100 011222212222222
Q ss_pred ------CCCcEEEEeCCCCCC----CCCC---HHHHHHhhHHHHHHHHHHHh----hhcCCCeEEEEEcC
Q 020875 80 ------TGVNIAVMVGGFPRK----EGME---RKDVMSKNVSIYKAQASALE----QHAAPNCKVLVVAN 132 (320)
Q Consensus 80 ------~~aDvVi~~ag~~~~----~~~~---r~~~~~~n~~~~~~i~~~i~----~~~~~~~~viv~sn 132 (320)
...|++|+.||+... ...+ ....+..|+.....+.+.+. +......++|++|+
T Consensus 76 ~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS 145 (322)
T PRK07453 76 DFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGT 145 (322)
T ss_pred HHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcc
Confidence 248999999986321 1122 23456788776665555444 33211247777764
No 207
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=98.11 E-value=2e-05 Score=70.52 Aligned_cols=162 Identities=14% Similarity=0.111 Sum_probs=88.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhh--
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA-- 78 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~a-- 78 (320)
+.++++|+||+|++|++++..|++.|+ +|++++++. ++++....++...... ...++....+..+.
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~ 81 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-------RVVLSARKA--EELEEAAAHLEALGIDALWIAADVADEADIERLAE 81 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence 347999999999999999999999886 789999863 3333322233211101 11222222222111
Q ss_pred -----cCCCcEEEEeCCCCCCCC---C---CHHHHHHhhHHHHHHHHHHHhhh---cCCCeEEEEEcCcchhhHHHHHHH
Q 020875 79 -----CTGVNIAVMVGGFPRKEG---M---ERKDVMSKNVSIYKAQASALEQH---AAPNCKVLVVANPANTNALILKEF 144 (320)
Q Consensus 79 -----l~~aDvVi~~ag~~~~~~---~---~r~~~~~~n~~~~~~i~~~i~~~---~~~~~~viv~snP~~~~~~~~~~~ 144 (320)
+...|+|||++|...... . ...+.+..|+.....+.+.+.++ ..+..+++++|+...... .
T Consensus 82 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~----~- 156 (259)
T PRK08213 82 ETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGG----N- 156 (259)
T ss_pred HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccC----C-
Confidence 246799999998642111 1 12345678888888888877654 112356777765321100 0
Q ss_pred CCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 145 ~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
.+.++...-|+.++.-...+...+++.+. +..++.
T Consensus 157 ~~~~~~~~~Y~~sKa~~~~~~~~~a~~~~--~~gi~v 191 (259)
T PRK08213 157 PPEVMDTIAYNTSKGAVINFTRALAAEWG--PHGIRV 191 (259)
T ss_pred CccccCcchHHHHHHHHHHHHHHHHHHhc--ccCEEE
Confidence 00011112344554444455566677654 345653
No 208
>PRK09072 short chain dehydrogenase; Provisional
Probab=98.10 E-value=2.4e-05 Score=70.20 Aligned_cols=124 Identities=21% Similarity=0.233 Sum_probs=73.2
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC--CCCcceEEeCChhh-
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF--PLLKGVVATTDAVE- 77 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~--~~~~~v~~~~~~~~- 77 (320)
|+.+.++|+|+||+|++|..++..|+++|. +|+++++++ +.+.....++..... ....++....+..+
T Consensus 1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~ 71 (263)
T PRK09072 1 MDLKDKRVLLTGASGGIGQALAEALAAAGA-------RLLLVGRNA--EKLEALAARLPYPGRHRWVVADLTSEAGREAV 71 (263)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence 777778999999999999999999999886 899999863 333322222211100 00011111111111
Q ss_pred -----hcCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHHhhhcC--CCeEEEEEcCc
Q 020875 78 -----ACTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASALEQHAA--PNCKVLVVANP 133 (320)
Q Consensus 78 -----al~~aDvVi~~ag~~~~~~---~~---r~~~~~~n~~~~~~i~~~i~~~~~--~~~~viv~snP 133 (320)
.+...|+||++||...... .+ ..+.+..|+.....+.+.+.++-. +...++++++.
T Consensus 72 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~ 140 (263)
T PRK09072 72 LARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGST 140 (263)
T ss_pred HHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecCh
Confidence 1356899999998753211 11 234567888777777766654311 22456666653
No 209
>PRK07985 oxidoreductase; Provisional
Probab=98.10 E-value=3.1e-05 Score=71.04 Aligned_cols=158 Identities=15% Similarity=0.103 Sum_probs=89.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCCh-------
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDA------- 75 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~------- 75 (320)
++++||||+|.+|.+++..|+++|. +|++.+++.+.+.++.....+...... ...++....+.
T Consensus 50 k~vlITGas~gIG~aia~~L~~~G~-------~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 122 (294)
T PRK07985 50 RKALVTGGDSGIGRAAAIAYAREGA-------DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEA 122 (294)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCC-------EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHH
Confidence 5899999999999999999999987 788877653222222221112111100 01122111111
Q ss_pred hhhcCCCcEEEEeCCCCCC--C--CCC---HHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCC
Q 020875 76 VEACTGVNIAVMVGGFPRK--E--GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSI 148 (320)
Q Consensus 76 ~~al~~aDvVi~~ag~~~~--~--~~~---r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~ 148 (320)
.+.+...|++|+.||.... + ..+ ..+.+..|+.....+++.+...-..+..+|++|+.... .+.
T Consensus 123 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~---------~~~ 193 (294)
T PRK07985 123 HKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAY---------QPS 193 (294)
T ss_pred HHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhc---------cCC
Confidence 1224467999999986321 1 112 23457788888777777776542234567777754311 122
Q ss_pred CCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 149 PAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 149 ~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
+..-.|+.++.....+-+.+++.++ +..|+.
T Consensus 194 ~~~~~Y~asKaal~~l~~~la~el~--~~gIrv 224 (294)
T PRK07985 194 PHLLDYAATKAAILNYSRGLAKQVA--EKGIRV 224 (294)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHh--HhCcEE
Confidence 2222466666655566666777653 334553
No 210
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=98.10 E-value=2.5e-05 Score=71.89 Aligned_cols=108 Identities=13% Similarity=0.108 Sum_probs=63.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHH---HHhcccCCCCcceEEeCChhhhcCCC
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKM---ELVDAAFPLLKGVVATTDAVEACTGV 82 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~---dl~~~~~~~~~~v~~~~~~~~al~~a 82 (320)
|||+|+| +|.+|..++..|.+.|+ +|.++++ + ++++.... .+..............++..++.+++
T Consensus 1 mkI~IiG-~G~iG~~~a~~L~~~g~-------~V~~~~r-~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (305)
T PRK12921 1 MRIAVVG-AGAVGGTFGGRLLEAGR-------DVTFLVR-P--KRAKALRERGLVIRSDHGDAVVPGPVITDPEELTGPF 69 (305)
T ss_pred CeEEEEC-CCHHHHHHHHHHHHCCC-------ceEEEec-H--HHHHHHHhCCeEEEeCCCeEEecceeecCHHHccCCC
Confidence 6899999 69999999999999887 7999998 3 22322111 01100000000112234445556899
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHH
Q 020875 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI 140 (320)
Q Consensus 83 DvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~ 140 (320)
|+||++.... ...++++.++.+..++..+|.+.|.++....+
T Consensus 70 d~vilavk~~----------------~~~~~~~~l~~~~~~~~~ii~~~nG~~~~~~l 111 (305)
T PRK12921 70 DLVILAVKAY----------------QLDAAIPDLKPLVGEDTVIIPLQNGIGQLEQL 111 (305)
T ss_pred CEEEEEeccc----------------CHHHHHHHHHhhcCCCCEEEEeeCCCChHHHH
Confidence 9999985321 12334455555433556677788987654433
No 211
>PRK12742 oxidoreductase; Provisional
Probab=98.10 E-value=4.8e-05 Score=66.93 Aligned_cols=161 Identities=10% Similarity=0.134 Sum_probs=88.7
Q ss_pred CCC-CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhh-
Q 020875 1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA- 78 (320)
Q Consensus 1 m~~-~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a- 78 (320)
|+. +.++|.|+||+|.||++++..|+++|. ++++.+++. .+.++....++. .. ....++.......+.
T Consensus 1 m~~~~~k~vlItGasggIG~~~a~~l~~~G~-------~v~~~~~~~-~~~~~~l~~~~~-~~-~~~~D~~~~~~~~~~~ 70 (237)
T PRK12742 1 MGAFTGKKVLVLGGSRGIGAAIVRRFVTDGA-------NVRFTYAGS-KDAAERLAQETG-AT-AVQTDSADRDAVIDVV 70 (237)
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEecCCC-HHHHHHHHHHhC-Ce-EEecCCCCHHHHHHHH
Confidence 443 346899999999999999999999886 777765532 122222111111 00 001111111112222
Q ss_pred --cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCC
Q 020875 79 --CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPA 150 (320)
Q Consensus 79 --l~~aDvVi~~ag~~~~~---~~~---r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~ 150 (320)
....|++|+.+|..... ..+ ....+..|+.....++..+.+.-.+...+|++|.-... . ...+.
T Consensus 71 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~------~--~~~~~ 142 (237)
T PRK12742 71 RKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGD------R--MPVAG 142 (237)
T ss_pred HHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccc------c--CCCCC
Confidence 34589999999874321 112 23456778777666655554432234567776653210 0 11233
Q ss_pred CcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 151 KNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 151 ~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
...|+.++.....+...+++.++ +..|+.
T Consensus 143 ~~~Y~~sKaa~~~~~~~la~~~~--~~gi~v 171 (237)
T PRK12742 143 MAAYAASKSALQGMARGLARDFG--PRGITI 171 (237)
T ss_pred CcchHHhHHHHHHHHHHHHHHHh--hhCeEE
Confidence 33577777777777777888765 344553
No 212
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=98.10 E-value=5.5e-05 Score=74.59 Aligned_cols=106 Identities=17% Similarity=0.209 Sum_probs=66.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHH-------HHh---cccCCCCcceEEeCC
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKM-------ELV---DAAFPLLKGVVATTD 74 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~-------dl~---~~~~~~~~~v~~~~~ 74 (320)
.+||+|+| +|.+|+.++..|+..|+ +|.++|+++ ++++.... .+. .........+...++
T Consensus 4 i~kIavIG-~G~MG~~iA~~la~~G~-------~V~v~D~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~ 73 (495)
T PRK07531 4 IMKAACIG-GGVIGGGWAARFLLAGI-------DVAVFDPHP--EAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCAS 73 (495)
T ss_pred cCEEEEEC-cCHHHHHHHHHHHhCCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCC
Confidence 36999999 69999999999999997 899999974 33322110 000 000001123666677
Q ss_pred hhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchh
Q 020875 75 AVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136 (320)
Q Consensus 75 ~~~al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~ 136 (320)
+.+++++||+||.+.. . + .+..+.+...+.+.+++++ |+.||.+++
T Consensus 74 ~~ea~~~aD~Vieavp--e-----~-------~~vk~~l~~~l~~~~~~~~--iI~SsTsgi 119 (495)
T PRK07531 74 LAEAVAGADWIQESVP--E-----R-------LDLKRRVLAEIDAAARPDA--LIGSSTSGF 119 (495)
T ss_pred HHHHhcCCCEEEEcCc--C-----C-------HHHHHHHHHHHHhhCCCCc--EEEEcCCCC
Confidence 8889999999998741 1 1 1223444455666664554 456665554
No 213
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=98.10 E-value=3e-05 Score=79.49 Aligned_cols=147 Identities=20% Similarity=0.228 Sum_probs=95.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhH-H--HHHHH-----hccc-CC-----CCcceE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN-G--VKMEL-----VDAA-FP-----LLKGVV 70 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~-~--~~~dl-----~~~~-~~-----~~~~v~ 70 (320)
..||+|+| +|.+|..++..++..|+ +|+|+|.++ +.+. + ..... .... .. ....++
T Consensus 313 i~~v~ViG-aG~mG~gIA~~~a~~G~-------~V~l~d~~~--~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~ 382 (714)
T TIGR02437 313 VKQAAVLG-AGIMGGGIAYQSASKGT-------PIVMKDINQ--HSLDLGLTEAAKLLNKQVERGRITPAKMAGVLNGIT 382 (714)
T ss_pred cceEEEEC-CchHHHHHHHHHHhCCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeE
Confidence 36999999 59999999999999998 899999974 2221 1 11111 1110 00 124677
Q ss_pred EeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchh-hHHHHHHHCCCC-
Q 020875 71 ATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT-NALILKEFAPSI- 148 (320)
Q Consensus 71 ~~~~~~~al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~-~~~~~~~~~~~~- 148 (320)
.++++ +++++||+||-++ -++.+.-+++...+.+.++|++ |++||.+.+ ++.+... ...
T Consensus 383 ~~~~~-~~~~~aDlViEav--------------~E~l~~K~~vf~~l~~~~~~~~--ilasnTS~l~i~~ia~~--~~~p 443 (714)
T TIGR02437 383 PTLSY-AGFDNVDIVVEAV--------------VENPKVKAAVLAEVEQHVREDA--ILASNTSTISISLLAKA--LKRP 443 (714)
T ss_pred EeCCH-HHhcCCCEEEEcC--------------cccHHHHHHHHHHHHhhCCCCc--EEEECCCCCCHHHHHhh--cCCc
Confidence 77775 7799999999874 2345667889999999987765 678887765 3344332 222
Q ss_pred ----------CCC--c---EE--EeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 149 ----------PAK--N---IT--CLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 149 ----------~~~--~---i~--~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
|++ + |+ ..|.-++......+++.+|..|--++
T Consensus 444 ~r~ig~Hff~P~~~~~lvEvv~g~~Ts~~~~~~~~~~~~~lgk~pv~v~ 492 (714)
T TIGR02437 444 ENFCGMHFFNPVHRMPLVEVIRGEKSSDETIATVVAYASKMGKTPIVVN 492 (714)
T ss_pred ccEEEEecCCCcccCceEeecCCCCCCHHHHHHHHHHHHHcCCEEEEeC
Confidence 222 1 22 23555665556667788887665554
No 214
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.
Probab=98.09 E-value=3.4e-05 Score=79.06 Aligned_cols=146 Identities=18% Similarity=0.224 Sum_probs=92.6
Q ss_pred CEEEEEcCCChhHHHHHHHHH-hcCcCCCCCCeEEEEEecCCccchhHH---HHH-HHhcc----c-CC-----CCcceE
Q 020875 6 VRVLVTGAAGQIGYALVPMIA-RGVMLGTDQPVILHMLDIPPAAEALNG---VKM-ELVDA----A-FP-----LLKGVV 70 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~-~~~~~~~~~~~ev~l~D~~~~~~~~~~---~~~-dl~~~----~-~~-----~~~~v~ 70 (320)
.||+|+| +|.+|+.++..++ ..|+ +|+|+|.++ +.+.. ... .+... . .+ ....++
T Consensus 305 ~~v~ViG-aG~mG~~iA~~~a~~~G~-------~V~l~d~~~--~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~ 374 (699)
T TIGR02440 305 KKVGILG-GGLMGGGIASVTATKAGI-------PVRIKDINP--QGINNALKYAWKLLDKGVKRRHMTPAERDNQMALIT 374 (699)
T ss_pred cEEEEEC-CcHHHHHHHHHHHHHcCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHcCeE
Confidence 5899999 5999999999888 4787 899999974 22211 111 11111 0 00 124677
Q ss_pred EeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchh-hHHHHHHHCCCC-
Q 020875 71 ATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT-NALILKEFAPSI- 148 (320)
Q Consensus 71 ~~~~~~~al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~-~~~~~~~~~~~~- 148 (320)
.++++ +++++||+||-++ -++.+.-+++...+.+++++++ |+.||.+.+ ++.+... . ..
T Consensus 375 ~~~~~-~~~~~adlViEav--------------~E~l~~K~~v~~~l~~~~~~~~--ilasnTS~l~i~~la~~-~-~~p 435 (699)
T TIGR02440 375 GTTDY-RGFKDVDIVIEAV--------------FEDLALKHQMVKDIEQECAAHT--IFASNTSSLPIGQIAAA-A-SRP 435 (699)
T ss_pred EeCCh-HHhccCCEEEEec--------------cccHHHHHHHHHHHHhhCCCCc--EEEeCCCCCCHHHHHHh-c-CCc
Confidence 77776 6899999999874 2235667889999999986664 678887765 3444332 1 22
Q ss_pred ----------CCC--c---EE--EeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 149 ----------PAK--N---IT--CLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 149 ----------~~~--~---i~--~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
|+. + |+ -.|.-++......+.+.+|..|--++
T Consensus 436 ~r~~g~HffnP~~~~~lVEvv~g~~T~~~~~~~~~~~~~~~gk~pv~v~ 484 (699)
T TIGR02440 436 ENVIGLHYFSPVEKMPLVEVIPHAGTSEQTIATTVALAKKQGKTPIVVA 484 (699)
T ss_pred ccEEEEecCCccccCceEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEc
Confidence 222 1 22 23555555555667788887665444
No 215
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=98.09 E-value=4.1e-05 Score=71.02 Aligned_cols=124 Identities=24% Similarity=0.255 Sum_probs=70.4
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC-CCcceEEeCChhhhc
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVATTDAVEAC 79 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~-~~~~v~~~~~~~~al 79 (320)
|++++|||+|+| +|.+|+.++..|...|+ +|.++.++. .+........+...... ....+...++ .++.
T Consensus 1 ~~~~~m~I~IiG-~GaiG~~lA~~L~~~g~-------~V~~~~r~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~ 70 (313)
T PRK06249 1 MDSETPRIGIIG-TGAIGGFYGAMLARAGF-------DVHFLLRSD-YEAVRENGLQVDSVHGDFHLPPVQAYRS-AEDM 70 (313)
T ss_pred CCCcCcEEEEEC-CCHHHHHHHHHHHHCCC-------eEEEEEeCC-HHHHHhCCeEEEeCCCCeeecCceEEcc-hhhc
Confidence 889999999999 59999999999999887 888998863 12111100011100000 0111233333 2356
Q ss_pred CCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCCcEE
Q 020875 80 TGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNIT 154 (320)
Q Consensus 80 ~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~i~ 154 (320)
..+|+||++.-... ..++++.+.....++..++.+.|=.+.--.+ .++ +|+.+++
T Consensus 71 ~~~D~vilavK~~~----------------~~~~~~~l~~~~~~~~~iv~lqNG~~~~e~l-~~~---~~~~~v~ 125 (313)
T PRK06249 71 PPCDWVLVGLKTTA----------------NALLAPLIPQVAAPDAKVLLLQNGLGVEEQL-REI---LPAEHLL 125 (313)
T ss_pred CCCCEEEEEecCCC----------------hHhHHHHHhhhcCCCCEEEEecCCCCcHHHH-HHH---CCCCcEE
Confidence 78999999853221 1233344444333566777788876543333 332 4555543
No 216
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=98.09 E-value=2.9e-05 Score=79.72 Aligned_cols=147 Identities=19% Similarity=0.180 Sum_probs=94.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHH---HHHH-H----hcccC-C-----CCcceEE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG---VKME-L----VDAAF-P-----LLKGVVA 71 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~---~~~d-l----~~~~~-~-----~~~~v~~ 71 (320)
.||+|+| +|.+|..++..++..|+ +|+|+|.++ +.++. .... + ..... + ....++.
T Consensus 314 ~~v~ViG-aG~mG~gIA~~~a~~G~-------~V~l~d~~~--~~l~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~i~~ 383 (715)
T PRK11730 314 KQAAVLG-AGIMGGGIAYQSASKGV-------PVIMKDINQ--KALDLGMTEAAKLLNKQVERGKIDGAKMAGVLSSIRP 383 (715)
T ss_pred ceEEEEC-CchhHHHHHHHHHhCCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEE
Confidence 5899999 59999999999999998 899999974 22221 1111 1 11100 0 1356777
Q ss_pred eCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchh-hHHHHHHHCCCCC-
Q 020875 72 TTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT-NALILKEFAPSIP- 149 (320)
Q Consensus 72 ~~~~~~al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~-~~~~~~~~~~~~~- 149 (320)
++++ +++++||+||-+. -++.+.-+++...++++++|++ |+.||.+.+ ++.+... ...|
T Consensus 384 ~~~~-~~~~~aDlViEav--------------~E~l~~K~~vf~~l~~~~~~~~--ilasNTSsl~i~~la~~--~~~p~ 444 (715)
T PRK11730 384 TLDY-AGFERVDVVVEAV--------------VENPKVKAAVLAEVEQKVREDT--ILASNTSTISISLLAKA--LKRPE 444 (715)
T ss_pred eCCH-HHhcCCCEEEecc--------------cCcHHHHHHHHHHHHhhCCCCc--EEEEcCCCCCHHHHHhh--cCCCc
Confidence 7776 7799999999874 2345667889999999996664 678887765 3444432 2222
Q ss_pred ----------CC--c---EEE--eehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 150 ----------AK--N---ITC--LTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 150 ----------~~--~---i~~--~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
+. + |+. .|.-++......+++.+|..|--++.
T Consensus 445 r~~g~Hff~P~~~~~lVEvv~g~~T~~~~~~~~~~~~~~lgk~pv~v~d 493 (715)
T PRK11730 445 NFCGMHFFNPVHRMPLVEVIRGEKTSDETIATVVAYASKMGKTPIVVND 493 (715)
T ss_pred cEEEEecCCcccccceEEeeCCCCCCHHHHHHHHHHHHHhCCceEEecC
Confidence 22 1 222 24555555555677888876654443
No 217
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=98.08 E-value=5e-05 Score=67.77 Aligned_cols=158 Identities=15% Similarity=0.139 Sum_probs=87.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhh--
Q 020875 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE-- 77 (320)
Q Consensus 3 ~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~-- 77 (320)
...++++||||+|.+|.+++..|++.|. ++++.++++ +++.....++.+.... ...++....+..+
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~G~-------~vvl~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~ 77 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEYGA-------EIIINDITA--ERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAI 77 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCC-------EEEEEcCCH--HHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHH
Confidence 3456899999999999999999999886 899999864 3333333334322110 1112221111222
Q ss_pred -----hcCCCcEEEEeCCCCCC-C--CC---CHHHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEEcCcchhhHHHHHHH
Q 020875 78 -----ACTGVNIAVMVGGFPRK-E--GM---ERKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEF 144 (320)
Q Consensus 78 -----al~~aDvVi~~ag~~~~-~--~~---~r~~~~~~n~~~~~~i~~~i~~~~--~~~~~viv~snP~~~~~~~~~~~ 144 (320)
.+...|+||+.+|.... + .. +....+..|+.....+.+.+.++. ....++|++|+-.. .
T Consensus 78 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~-------~- 149 (254)
T PRK08085 78 EHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQS-------E- 149 (254)
T ss_pred HHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchh-------c-
Confidence 22457999999986421 1 11 223456777776666666555432 12356777764321 1
Q ss_pred CCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 145 ~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
.+.+....|+.++.--..+-+.+++.+. +..|+
T Consensus 150 -~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~ 182 (254)
T PRK08085 150 -LGRDTITPYAASKGAVKMLTRGMCVELA--RHNIQ 182 (254)
T ss_pred -cCCCCCcchHHHHHHHHHHHHHHHHHHH--hhCeE
Confidence 1222222455555544455555666543 34455
No 218
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=98.08 E-value=2.5e-05 Score=69.39 Aligned_cols=152 Identities=14% Similarity=0.071 Sum_probs=83.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhh------
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVE------ 77 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~------ 77 (320)
+.++++|+||+|++|+.++..|++.|+ ++++++++. .... .+.......++....+..+
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-------~v~~~~~~~----~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 71 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-------KVIGFDQAF----LTQE----DYPFATFVLDVSDAAAVAQVCQRLL 71 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEecch----hhhc----CCceEEEEecCCCHHHHHHHHHHHH
Confidence 447899999999999999999999887 788888753 1000 0000000011111112222
Q ss_pred -hcCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEEcCcchhhHHHHHHHCCCC
Q 020875 78 -ACTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEFAPSI 148 (320)
Q Consensus 78 -al~~aDvVi~~ag~~~~~~---~~---r~~~~~~n~~~~~~i~~~i~~~~--~~~~~viv~snP~~~~~~~~~~~~~~~ 148 (320)
.+...|+||+++|...... .+ ....+..|+.....+++.+..+- ....+++++|+-.. . ...
T Consensus 72 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~-------~--~~~ 142 (252)
T PRK08220 72 AETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAA-------H--VPR 142 (252)
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchh-------c--cCC
Confidence 2345799999998743211 12 23456778777666666654321 02346666665321 0 111
Q ss_pred CCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 149 PAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 149 ~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
+..-.|+.++.-...+...+++.+. +..++.
T Consensus 143 ~~~~~Y~~sK~a~~~~~~~la~e~~--~~~i~v 173 (252)
T PRK08220 143 IGMAAYGASKAALTSLAKCVGLELA--PYGVRC 173 (252)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhh--HhCeEE
Confidence 2112356666555566666777654 345553
No 219
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=98.08 E-value=6.2e-05 Score=67.69 Aligned_cols=151 Identities=13% Similarity=0.121 Sum_probs=85.2
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhh--
Q 020875 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE-- 77 (320)
Q Consensus 3 ~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~-- 77 (320)
.+.+++.||||+|.+|.+++..|+..|. ++++.+++. ++++....++...... ...++....+..+
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~-------~vv~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 78 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYAKAGA-------TIVFNDINQ--ELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMV 78 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 3446899999999999999999999887 788888764 3343333333321111 1112221112222
Q ss_pred -----hcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHH----HHHhhhcCCCeEEEEEcCcchhhHHHHH
Q 020875 78 -----ACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQA----SALEQHAAPNCKVLVVANPANTNALILK 142 (320)
Q Consensus 78 -----al~~aDvVi~~ag~~~~~---~~~---r~~~~~~n~~~~~~i~----~~i~~~~~~~~~viv~snP~~~~~~~~~ 142 (320)
.+...|++|+++|..... ..+ ....+..|......+. +.+++. ...++|++++....
T Consensus 79 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~g~iv~isS~~~~------ 150 (265)
T PRK07097 79 SQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKK--GHGKIINICSMMSE------ 150 (265)
T ss_pred HHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc--CCcEEEEEcCcccc------
Confidence 234579999999874311 111 2234556665544444 444333 24577777764321
Q ss_pred HHCCCCCCCcEEEeehhhHHHHHHHHHHHcC
Q 020875 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (320)
Q Consensus 143 ~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~ 173 (320)
.+.+....|+.++.-...+.+.+++.++
T Consensus 151 ---~~~~~~~~Y~~sKaal~~l~~~la~e~~ 178 (265)
T PRK07097 151 ---LGRETVSAYAAAKGGLKMLTKNIASEYG 178 (265)
T ss_pred ---CCCCCCccHHHHHHHHHHHHHHHHHHhh
Confidence 1222223567776666677777777765
No 220
>PRK07063 short chain dehydrogenase; Provisional
Probab=98.08 E-value=4.4e-05 Score=68.35 Aligned_cols=158 Identities=14% Similarity=0.088 Sum_probs=88.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcc--cCC---CCcceEEeCChhhh-
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA--AFP---LLKGVVATTDAVEA- 78 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~--~~~---~~~~v~~~~~~~~a- 78 (320)
.++++|+||+|.+|.+++..|+++|. +|+++++++ +.++....++... ... ...++....+..++
T Consensus 7 ~k~vlVtGas~gIG~~~a~~l~~~G~-------~vv~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 77 (260)
T PRK07063 7 GKVALVTGAAQGIGAAIARAFAREGA-------AVALADLDA--ALAERAAAAIARDVAGARVLAVPADVTDAASVAAAV 77 (260)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHH
Confidence 46899999999999999999999986 799999864 3344333344321 100 11122222222222
Q ss_pred ------cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEEcCcchhhHHHHHHH
Q 020875 79 ------CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEF 144 (320)
Q Consensus 79 ------l~~aDvVi~~ag~~~~~---~~~---r~~~~~~n~~~~~~i~~~i~~~~--~~~~~viv~snP~~~~~~~~~~~ 144 (320)
+...|++|+.||..... ..+ ....+..|+.....+.+.+..+- ...+.+|++|+....
T Consensus 78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-------- 149 (260)
T PRK07063 78 AAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAF-------- 149 (260)
T ss_pred HHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhc--------
Confidence 24689999999864311 111 23345667666555555443221 123677777754211
Q ss_pred CCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeee
Q 020875 145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182 (320)
Q Consensus 145 ~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~ 182 (320)
.+.+..-.|+.++..-..+-+.+++.+. +..|+..
T Consensus 150 -~~~~~~~~Y~~sKaa~~~~~~~la~el~--~~gIrvn 184 (260)
T PRK07063 150 -KIIPGCFPYPVAKHGLLGLTRALGIEYA--ARNVRVN 184 (260)
T ss_pred -cCCCCchHHHHHHHHHHHHHHHHHHHhC--ccCeEEE
Confidence 1222222456666555566667777764 4566643
No 221
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=98.07 E-value=4.4e-05 Score=68.43 Aligned_cols=156 Identities=13% Similarity=0.115 Sum_probs=85.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC--CCCcceEEeCChhh------
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF--PLLKGVVATTDAVE------ 77 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~--~~~~~v~~~~~~~~------ 77 (320)
|+++||||+|.+|.+++..|+++|. +|++.++++ +.+.....++.+... ....++....+..+
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~ 71 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGA-------RVVISSRNE--ENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAW 71 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHH
Confidence 5899999999999999999999987 799999864 333333333432110 01112222112222
Q ss_pred -hcCCCcEEEEeCCCCCC-C----CCCHHH---HHHhhHH----HHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHH
Q 020875 78 -ACTGVNIAVMVGGFPRK-E----GMERKD---VMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALILKEF 144 (320)
Q Consensus 78 -al~~aDvVi~~ag~~~~-~----~~~r~~---~~~~n~~----~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~ 144 (320)
.+...|++|+.||.... + ..+..+ .+..|+. ..+.+++.+.+.. ..+++|++|+....
T Consensus 72 ~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~~g~iv~isS~~~~-------- 142 (259)
T PRK08340 72 ELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKK-MKGVLVYLSSVSVK-------- 142 (259)
T ss_pred HhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcC-CCCEEEEEeCcccC--------
Confidence 23468999999986421 1 112222 2333432 2344455544322 34567777754211
Q ss_pred CCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeee
Q 020875 145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182 (320)
Q Consensus 145 ~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~ 182 (320)
...|..-.++.++--...+-+.+|+.++ +..|+..
T Consensus 143 -~~~~~~~~y~~sKaa~~~~~~~la~e~~--~~gI~v~ 177 (259)
T PRK08340 143 -EPMPPLVLADVTRAGLVQLAKGVSRTYG--GKGIRAY 177 (259)
T ss_pred -CCCCCchHHHHHHHHHHHHHHHHHHHhC--CCCEEEE
Confidence 1222222455555555566667777765 4566643
No 222
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=98.07 E-value=0.00018 Score=63.84 Aligned_cols=156 Identities=17% Similarity=0.180 Sum_probs=86.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCC----CcceEEe--C-----
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL----LKGVVAT--T----- 73 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~----~~~v~~~--~----- 73 (320)
.++|.|+||+|++|.+++..|++.|. +|+++|++. +.+.....++.+..... ..++... .
T Consensus 12 ~k~vlItG~~g~iG~~la~~l~~~G~-------~Vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~ 82 (247)
T PRK08945 12 DRIILVTGAGDGIGREAALTYARHGA-------TVILLGRTE--EKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQL 82 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-------cEEEEeCCH--HHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHH
Confidence 46899999999999999999999886 789999864 33333334443322110 0111110 0
Q ss_pred --ChhhhcCCCcEEEEeCCCCCC--C--CCC---HHHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEEcCcchhhHHHHH
Q 020875 74 --DAVEACTGVNIAVMVGGFPRK--E--GME---RKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILK 142 (320)
Q Consensus 74 --~~~~al~~aDvVi~~ag~~~~--~--~~~---r~~~~~~n~~~~~~i~~~i~~~~--~~~~~viv~snP~~~~~~~~~ 142 (320)
...+.+...|+||+.||.... + ..+ ..+.+..|+.....+.+.+..+. .+...++++|+....
T Consensus 83 ~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~------ 156 (247)
T PRK08945 83 ADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGR------ 156 (247)
T ss_pred HHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhc------
Confidence 122334568999999986321 1 112 23456778776555555553221 133466666653211
Q ss_pred HHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 143 ~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
.+.+....++.++.-...+...+++.+. ...++
T Consensus 157 ---~~~~~~~~Y~~sK~a~~~~~~~~~~~~~--~~~i~ 189 (247)
T PRK08945 157 ---QGRANWGAYAVSKFATEGMMQVLADEYQ--GTNLR 189 (247)
T ss_pred ---CCCCCCcccHHHHHHHHHHHHHHHHHhc--ccCEE
Confidence 1223223466665544555556666654 34555
No 223
>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+)). Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria.
Probab=98.07 E-value=4.2e-05 Score=71.62 Aligned_cols=107 Identities=24% Similarity=0.344 Sum_probs=65.1
Q ss_pred EEEEEcCCChhHHHHHHHHHhcCcCCCC-CCeEEEEEecCCc--cchhHHHHHHHhcccCC------CCcceEEeCChhh
Q 020875 7 RVLVTGAAGQIGYALVPMIARGVMLGTD-QPVILHMLDIPPA--AEALNGVKMELVDAAFP------LLKGVVATTDAVE 77 (320)
Q Consensus 7 kI~IiGA~G~vG~~la~~L~~~~~~~~~-~~~ev~l~D~~~~--~~~~~~~~~dl~~~~~~------~~~~v~~~~~~~~ 77 (320)
||+|+| +|..|++++..|..++..... ...+|.|+.+++. .+.+. ....-.+.... +..+++.++++.+
T Consensus 1 kI~VIG-aG~wGtALA~~la~ng~~~~~~~~~~V~lw~~~~~~~~~~~~-~~in~~~~n~~ylpgi~Lp~~i~at~dl~e 78 (342)
T TIGR03376 1 RVAVVG-SGNWGTAIAKIVAENARALPELFEESVRMWVFEEEIEGRNLT-EIINTTHENVKYLPGIKLPANLVAVPDLVE 78 (342)
T ss_pred CEEEEC-cCHHHHHHHHHHHHcCCcccccCCceEEEEEeccccCCHHHH-HHHHhcCCCccccCCCcCCCCeEEECCHHH
Confidence 699999 699999999999987721100 0018999987431 01111 11111222221 2346888889999
Q ss_pred hcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEc
Q 020875 78 ACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA 131 (320)
Q Consensus 78 al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~s 131 (320)
++++||+||++. |. +.++++++.++.+-.++..+|.++
T Consensus 79 al~~ADiIIlAV--Ps--------------~~i~~vl~~l~~~l~~~~~iVs~t 116 (342)
T TIGR03376 79 AAKGADILVFVI--PH--------------QFLEGICKQLKGHVKPNARAISCI 116 (342)
T ss_pred HHhcCCEEEEEC--Ch--------------HHHHHHHHHHHhhcCCCCEEEEEe
Confidence 999999999873 32 345566666665543444455554
No 224
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=98.07 E-value=7.7e-05 Score=66.63 Aligned_cols=155 Identities=14% Similarity=0.092 Sum_probs=86.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhh--
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA-- 78 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~a-- 78 (320)
+.+.++|+||+|.+|.+++..|++.|. +|+++|+.+..+ . ..++...... ...++....+..+.
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-------~vv~~~~~~~~~-~---~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 77 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-------DIVGINIVEPTE-T---IEQVTALGRRFLSLTADLRKIDGIPALLE 77 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEecCcchHH-H---HHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence 346899999999999999999999886 788888753211 1 1122211100 01122211122222
Q ss_pred -----cCCCcEEEEeCCCCCCC---CC---CHHHHHHhhHHHHHHHHHHHhh----hcCCCeEEEEEcCcchhhHHHHHH
Q 020875 79 -----CTGVNIAVMVGGFPRKE---GM---ERKDVMSKNVSIYKAQASALEQ----HAAPNCKVLVVANPANTNALILKE 143 (320)
Q Consensus 79 -----l~~aDvVi~~ag~~~~~---~~---~r~~~~~~n~~~~~~i~~~i~~----~~~~~~~viv~snP~~~~~~~~~~ 143 (320)
+...|++|++||..... .. +..+.+..|+.....+.+.+.. .+ +.++++++|+-...
T Consensus 78 ~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~g~iv~isS~~~~------- 149 (253)
T PRK08993 78 RAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQG-NGGKIINIASMLSF------- 149 (253)
T ss_pred HHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCC-CCeEEEEECchhhc-------
Confidence 34689999999875321 11 2334567887766655555443 22 34677777753211
Q ss_pred HCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 144 ~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
.+.+..-.|+.++.-...+-+.+|+.+. +..|+.
T Consensus 150 --~~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~gi~v 183 (253)
T PRK08993 150 --QGGIRVPSYTASKSGVMGVTRLMANEWA--KHNINV 183 (253)
T ss_pred --cCCCCCcchHHHHHHHHHHHHHHHHHhh--hhCeEE
Confidence 1112112466666655556666777654 345553
No 225
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.06 E-value=2.5e-05 Score=71.54 Aligned_cols=74 Identities=18% Similarity=0.299 Sum_probs=51.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHH---HHhccc-----C------CCCcceEE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKM---ELVDAA-----F------PLLKGVVA 71 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~---dl~~~~-----~------~~~~~v~~ 71 (320)
.||+|+| +|.+|..++..|+..|+ +|+++|+++ +.++.... ++.+.. . .....++.
T Consensus 2 ~~V~VIG-~G~mG~~iA~~la~~G~-------~V~~~d~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 71 (288)
T PRK09260 2 EKLVVVG-AGVMGRGIAYVFAVSGF-------QTTLVDIKQ--EQLESAQQEIASIFEQGVARGKLTEAARQAALARLSY 71 (288)
T ss_pred cEEEEEC-ccHHHHHHHHHHHhCCC-------cEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE
Confidence 4899999 59999999999999887 899999974 33322111 111000 0 01234666
Q ss_pred eCChhhhcCCCcEEEEeC
Q 020875 72 TTDAVEACTGVNIAVMVG 89 (320)
Q Consensus 72 ~~~~~~al~~aDvVi~~a 89 (320)
++++.+++++||+||.+.
T Consensus 72 ~~~~~~~~~~aD~Vi~av 89 (288)
T PRK09260 72 SLDLKAAVADADLVIEAV 89 (288)
T ss_pred eCcHHHhhcCCCEEEEec
Confidence 778888999999999985
No 226
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=98.06 E-value=3.2e-05 Score=69.45 Aligned_cols=153 Identities=16% Similarity=0.122 Sum_probs=84.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhh-----
Q 020875 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVE----- 77 (320)
Q Consensus 3 ~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~----- 77 (320)
.+.++++|+||+|.+|.+++..|++.|. +|+++++++ ++++....++.........++....+..+
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 74 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGA-------RVAVLERSA--EKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQT 74 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHH
Confidence 3457999999999999999999999887 799999864 33332222221100001112221112222
Q ss_pred --hcCCCcEEEEeCCCCCC--C--CCCH-------HHHHHhhHHHHHHHHHHHhhhc-CCCeEEEEEcCcchhhHHHHHH
Q 020875 78 --ACTGVNIAVMVGGFPRK--E--GMER-------KDVMSKNVSIYKAQASALEQHA-APNCKVLVVANPANTNALILKE 143 (320)
Q Consensus 78 --al~~aDvVi~~ag~~~~--~--~~~r-------~~~~~~n~~~~~~i~~~i~~~~-~~~~~viv~snP~~~~~~~~~~ 143 (320)
.+...|++|+.||+... + ..+. ...+..|+.....+++.+...- ...+.+|++++-...
T Consensus 75 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~------- 147 (263)
T PRK06200 75 VDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSF------- 147 (263)
T ss_pred HHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhc-------
Confidence 23468999999997421 1 1121 2234566665555554444321 022456666542211
Q ss_pred HCCCCCCCcEEEeehhhHHHHHHHHHHHcC
Q 020875 144 FAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (320)
Q Consensus 144 ~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~ 173 (320)
...+..-.|+.++.-...+-+.+|+.++
T Consensus 148 --~~~~~~~~Y~~sK~a~~~~~~~la~el~ 175 (263)
T PRK06200 148 --YPGGGGPLYTASKHAVVGLVRQLAYELA 175 (263)
T ss_pred --CCCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence 1122222577777767777778888875
No 227
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=98.06 E-value=3e-05 Score=58.64 Aligned_cols=94 Identities=20% Similarity=0.223 Sum_probs=58.7
Q ss_pred EEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEE-ecCCccchhHHHHHHHhcccCCCCcceEEeC-ChhhhcCCCcE
Q 020875 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHML-DIPPAAEALNGVKMELVDAAFPLLKGVVATT-DAVEACTGVNI 84 (320)
Q Consensus 7 kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~-D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~-~~~~al~~aDv 84 (320)
||+|+| +|.+|++++..|...+.. ..+|.++ ++++ ++++....++. +.... +..++++++|+
T Consensus 1 kI~iIG-~G~mg~al~~~l~~~g~~----~~~v~~~~~r~~--~~~~~~~~~~~---------~~~~~~~~~~~~~~adv 64 (96)
T PF03807_consen 1 KIGIIG-AGNMGSALARGLLASGIK----PHEVIIVSSRSP--EKAAELAKEYG---------VQATADDNEEAAQEADV 64 (96)
T ss_dssp EEEEES-TSHHHHHHHHHHHHTTS-----GGEEEEEEESSH--HHHHHHHHHCT---------TEEESEEHHHHHHHTSE
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCCC----ceeEEeeccCcH--HHHHHHHHhhc---------cccccCChHHhhccCCE
Confidence 799999 699999999999998841 1278755 7763 44433222221 22222 57788899999
Q ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q 020875 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANP 133 (320)
Q Consensus 85 Vi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP 133 (320)
||++.-. +.+.++++.+.... ++..+|-++||
T Consensus 65 vilav~p----------------~~~~~v~~~i~~~~-~~~~vis~~ag 96 (96)
T PF03807_consen 65 VILAVKP----------------QQLPEVLSEIPHLL-KGKLVISIAAG 96 (96)
T ss_dssp EEE-S-G----------------GGHHHHHHHHHHHH-TTSEEEEESTT
T ss_pred EEEEECH----------------HHHHHHHHHHhhcc-CCCEEEEeCCC
Confidence 9998521 11344555553333 55667777765
No 228
>PRK12827 short chain dehydrogenase; Provisional
Probab=98.05 E-value=6.1e-05 Score=66.60 Aligned_cols=153 Identities=19% Similarity=0.189 Sum_probs=83.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCc--cchhHHHHHHHhcccCC---CCcceEEeCChhhh
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPA--AEALNGVKMELVDAAFP---LLKGVVATTDAVEA 78 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~--~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~a 78 (320)
+.++|+|+||+|++|++++..|+++|+ +++++++... .+.......++...... ...++....+..+.
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~-------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 77 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGA-------DVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAA 77 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-------eEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence 357999999999999999999999887 7888775321 12222111222111100 01111111122222
Q ss_pred -------cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHh-hh--cCCCeEEEEEcCcchhhHHHHH
Q 020875 79 -------CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALE-QH--AAPNCKVLVVANPANTNALILK 142 (320)
Q Consensus 79 -------l~~aDvVi~~ag~~~~~---~~~---r~~~~~~n~~~~~~i~~~i~-~~--~~~~~~viv~snP~~~~~~~~~ 142 (320)
....|+||+.+|..... ..+ ....+..|......+++.+. .. .....++|++|.....
T Consensus 78 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~------ 151 (249)
T PRK12827 78 LDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGV------ 151 (249)
T ss_pred HHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhc------
Confidence 24689999999875421 112 23456788888888888876 21 0022456767654321
Q ss_pred HHCCCCCCCcEEEeehhhHHHHHHHHHHHc
Q 020875 143 EFAPSIPAKNITCLTRLDHNRALGQISEKL 172 (320)
Q Consensus 143 ~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l 172 (320)
.+.+....++.++.-...+.+.+++.+
T Consensus 152 ---~~~~~~~~y~~sK~a~~~~~~~l~~~~ 178 (249)
T PRK12827 152 ---RGNRGQVNYAASKAGLIGLTKTLANEL 178 (249)
T ss_pred ---CCCCCCchhHHHHHHHHHHHHHHHHHh
Confidence 122222245555544444445566554
No 229
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.05 E-value=3.4e-05 Score=67.97 Aligned_cols=118 Identities=19% Similarity=0.138 Sum_probs=66.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhh---
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA--- 78 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~a--- 78 (320)
+++|+|+||+|++|++++..|+++|+ ++.+..++.. ........++...... ...++....+..++
T Consensus 6 ~~~vlItGasg~iG~~l~~~l~~~g~-------~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 77 (249)
T PRK12825 6 GRVALVTGAARGLGRAIALRLARAGA-------DVVVHYRSDE-EAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAA 77 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-------eEEEEeCCCH-HHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHH
Confidence 46899999999999999999999987 6666554321 2222222222211100 01122111122222
Q ss_pred ----cCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHHh----hhcCCCeEEEEEcC
Q 020875 79 ----CTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASALE----QHAAPNCKVLVVAN 132 (320)
Q Consensus 79 ----l~~aDvVi~~ag~~~~~~---~~---r~~~~~~n~~~~~~i~~~i~----~~~~~~~~viv~sn 132 (320)
+.+.|+||+++|...... .+ ..+.+..|+.....+.+.+. +.. ..+++++|+
T Consensus 78 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~~i~~SS 143 (249)
T PRK12825 78 AVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR--GGRIVNISS 143 (249)
T ss_pred HHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CCEEEEECc
Confidence 346799999998643211 12 23456677777777766663 332 245666664
No 230
>PRK07023 short chain dehydrogenase; Provisional
Probab=98.05 E-value=8.8e-06 Score=72.15 Aligned_cols=35 Identities=23% Similarity=0.280 Sum_probs=31.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCC
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~ 46 (320)
+|+++|+||+|++|.+++..|++.|. +|++++++.
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~-------~v~~~~r~~ 35 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGI-------AVLGVARSR 35 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCC-------EEEEEecCc
Confidence 46899999999999999999999886 788888864
No 231
>PRK07578 short chain dehydrogenase; Provisional
Probab=98.05 E-value=3.5e-05 Score=66.20 Aligned_cols=144 Identities=14% Similarity=0.124 Sum_probs=82.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcEE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDvV 85 (320)
|+++|+||+|.+|.+++..|.++ . +|++.+++.. ....|+.+... + ....+.+...|++
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~-------~vi~~~r~~~-----~~~~D~~~~~~-----~---~~~~~~~~~id~l 59 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-H-------EVITAGRSSG-----DVQVDITDPAS-----I---RALFEKVGKVDAV 59 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-C-------cEEEEecCCC-----ceEecCCChHH-----H---HHHHHhcCCCCEE
Confidence 48999999999999999999887 4 7888887631 12235444320 0 0111223478999
Q ss_pred EEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCCcEEEeehh
Q 020875 86 VMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRL 159 (320)
Q Consensus 86 i~~ag~~~~~---~~~r---~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~i~~~t~l 159 (320)
|+.+|..... ..+. .+.+..|+.....+.+.+.++-.+...++++|..... .+.|..-.|+.++-
T Consensus 60 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~---------~~~~~~~~Y~~sK~ 130 (199)
T PRK07578 60 VSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSD---------EPIPGGASAATVNG 130 (199)
T ss_pred EECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccC---------CCCCCchHHHHHHH
Confidence 9999874321 1222 2345677777667776665542233556666642210 12222123455554
Q ss_pred hHHHHHHHHHHHcCCCCCCeeee
Q 020875 160 DHNRALGQISEKLNVQVSDVKNV 182 (320)
Q Consensus 160 d~~r~~~~~a~~l~v~~~~v~~~ 182 (320)
-...+-..++..+ +..++..
T Consensus 131 a~~~~~~~la~e~---~~gi~v~ 150 (199)
T PRK07578 131 ALEGFVKAAALEL---PRGIRIN 150 (199)
T ss_pred HHHHHHHHHHHHc---cCCeEEE
Confidence 4455666677766 3456643
No 232
>PRK08339 short chain dehydrogenase; Provisional
Probab=98.03 E-value=9.7e-05 Score=66.54 Aligned_cols=154 Identities=14% Similarity=0.215 Sum_probs=87.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhccc-C---CCCcceEEeCChhhhc-
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-F---PLLKGVVATTDAVEAC- 79 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~-~---~~~~~v~~~~~~~~al- 79 (320)
.+.++||||+|.+|.+++..|++.|. +|++.+++. ++++....++.... . ....++....+..+.+
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~ 78 (263)
T PRK08339 8 GKLAFTTASSKGIGFGVARVLARAGA-------DVILLSRNE--ENLKKAREKIKSESNVDVSYIVADLTKREDLERTVK 78 (263)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHH
Confidence 45789999999999999999999987 799999864 33433333332211 0 0111222222222222
Q ss_pred -----CCCcEEEEeCCCCCCC---CCC---HHHHHHhhHH----HHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHH
Q 020875 80 -----TGVNIAVMVGGFPRKE---GME---RKDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALILKEF 144 (320)
Q Consensus 80 -----~~aDvVi~~ag~~~~~---~~~---r~~~~~~n~~----~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~ 144 (320)
...|++|+.+|..... ..+ ....+..|+. .++.+.+.+++.. .+++|++|+....
T Consensus 79 ~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~--~g~Ii~isS~~~~-------- 148 (263)
T PRK08339 79 ELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG--FGRIIYSTSVAIK-------- 148 (263)
T ss_pred HHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CCEEEEEcCcccc--------
Confidence 3589999999875321 122 2234555543 4566666666543 3677777764311
Q ss_pred CCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 145 ~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
.+.|..-.++.++.-...+-+.+|+.+. +..|+
T Consensus 149 -~~~~~~~~y~asKaal~~l~~~la~el~--~~gIr 181 (263)
T PRK08339 149 -EPIPNIALSNVVRISMAGLVRTLAKELG--PKGIT 181 (263)
T ss_pred -CCCCcchhhHHHHHHHHHHHHHHHHHhc--ccCeE
Confidence 1122112355555555566677777765 45566
No 233
>PRK07109 short chain dehydrogenase; Provisional
Probab=98.03 E-value=0.00011 Score=68.84 Aligned_cols=159 Identities=16% Similarity=0.116 Sum_probs=86.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhh---
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA--- 78 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~a--- 78 (320)
.++|+||||+|.+|.+++..|+.+|. +|+++++++ ++++....++...... ...++....+..++
T Consensus 8 ~k~vlITGas~gIG~~la~~la~~G~-------~Vvl~~R~~--~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~ 78 (334)
T PRK07109 8 RQVVVITGASAGVGRATARAFARRGA-------KVVLLARGE--EGLEALAAEIRAAGGEALAVVADVADAEAVQAAADR 78 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHH
Confidence 36899999999999999999999987 799999863 3444333334321111 01122222222222
Q ss_pred ----cCCCcEEEEeCCCCCCC---CCCH---HHHHHhhH----HHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHH
Q 020875 79 ----CTGVNIAVMVGGFPRKE---GMER---KDVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILKEF 144 (320)
Q Consensus 79 ----l~~aDvVi~~ag~~~~~---~~~r---~~~~~~n~----~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~ 144 (320)
+...|++|+.+|..... ..+. ...+..|+ ..++.+.+.+.+.. ...+|++|+-...
T Consensus 79 ~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~--~g~iV~isS~~~~-------- 148 (334)
T PRK07109 79 AEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD--RGAIIQVGSALAY-------- 148 (334)
T ss_pred HHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CcEEEEeCChhhc--------
Confidence 34689999999864311 1122 22344554 34555666665542 3567777653211
Q ss_pred CCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeeeE
Q 020875 145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVI 183 (320)
Q Consensus 145 ~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~ 183 (320)
.+.|..-.|+.++.-...+...++..+......|+...
T Consensus 149 -~~~~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~ 186 (334)
T PRK07109 149 -RSIPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTM 186 (334)
T ss_pred -cCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEE
Confidence 11222223455554444555556666654434566443
No 234
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=98.03 E-value=4.2e-05 Score=67.81 Aligned_cols=150 Identities=14% Similarity=0.103 Sum_probs=82.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhh---
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA--- 78 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~a--- 78 (320)
.++|+|+||+|++|++++..|++.|. +|++++++. +.......++...... ...++....+..++
T Consensus 3 ~~~ilItGas~~iG~~la~~l~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 73 (250)
T TIGR03206 3 DKTAIVTGGGGGIGGATCRRFAEEGA-------KVAVFDLNR--EAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAA 73 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEecCCH--HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence 46899999999999999999999886 899999864 3333222333221100 01122211122222
Q ss_pred ----cCCCcEEEEeCCCCCCCC---CCH---HHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEEcCcchhhHHHHHHHCC
Q 020875 79 ----CTGVNIAVMVGGFPRKEG---MER---KDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEFAP 146 (320)
Q Consensus 79 ----l~~aDvVi~~ag~~~~~~---~~r---~~~~~~n~~~~~~i~~~i~~~~--~~~~~viv~snP~~~~~~~~~~~~~ 146 (320)
+...|+||+.+|...... .+. ...+..|+.....+.+.+...- .+..+++++|+.... .
T Consensus 74 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~---------~ 144 (250)
T TIGR03206 74 AEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAAR---------V 144 (250)
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhc---------c
Confidence 236899999998632111 122 2346788887777666654321 023467777653211 1
Q ss_pred CCCCCcEEEeehhhHHHHHHHHHHHc
Q 020875 147 SIPAKNITCLTRLDHNRALGQISEKL 172 (320)
Q Consensus 147 ~~~~~~i~~~t~ld~~r~~~~~a~~l 172 (320)
+.+....++.++.....+...+++.+
T Consensus 145 ~~~~~~~Y~~sK~a~~~~~~~la~~~ 170 (250)
T TIGR03206 145 GSSGEAVYAACKGGLVAFSKTMAREH 170 (250)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 22222245555544445555566664
No 235
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=98.03 E-value=2.9e-05 Score=74.35 Aligned_cols=104 Identities=17% Similarity=0.107 Sum_probs=64.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhhc
Q 020875 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEAC 79 (320)
Q Consensus 3 ~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~al 79 (320)
.+.++|+||||+|.+|++++..|+++|. +|+++++++ +++... +.+.... ...++....+..+.+
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~G~-------~Vi~l~r~~--~~l~~~---~~~~~~~v~~v~~Dvsd~~~v~~~l 243 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQGA-------KVVALTSNS--DKITLE---INGEDLPVKTLHWQVGQEAALAELL 243 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHH---HhhcCCCeEEEEeeCCCHHHHHHHh
Confidence 3457999999999999999999999886 788888763 222211 1111100 011222222344567
Q ss_pred CCCcEEEEeCCCCCCCCCC---HHHHHHhhHHHHHHHHHHHh
Q 020875 80 TGVNIAVMVGGFPRKEGME---RKDVMSKNVSIYKAQASALE 118 (320)
Q Consensus 80 ~~aDvVi~~ag~~~~~~~~---r~~~~~~n~~~~~~i~~~i~ 118 (320)
.+.|++|+.||.......+ ..+.++.|......+.+.+.
T Consensus 244 ~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~l 285 (406)
T PRK07424 244 EKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFF 285 (406)
T ss_pred CCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999875322222 23467778776666666543
No 236
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=98.02 E-value=7.7e-05 Score=69.26 Aligned_cols=105 Identities=19% Similarity=0.247 Sum_probs=65.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhccc----CCCCcceEEeCChhhhcC
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA----FPLLKGVVATTDAVEACT 80 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~----~~~~~~v~~~~~~~~al~ 80 (320)
||||+|+| +|.+|+.++..|...|+ +|.++|+++ +.++....+..+.. ......+...++..++++
T Consensus 1 mmkI~iiG-~G~mG~~~a~~L~~~g~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (325)
T PRK00094 1 MMKIAVLG-AGSWGTALAIVLARNGH-------DVTLWARDP--EQAAEINADRENPRYLPGIKLPDNLRATTDLAEALA 70 (325)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCC-------EEEEEECCH--HHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHh
Confidence 47999999 69999999999999887 899999863 23322221100000 011123555567777889
Q ss_pred CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcch
Q 020875 81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN 135 (320)
Q Consensus 81 ~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~ 135 (320)
++|+||++... ..+.++++.+..+..++..+|..+|-++
T Consensus 71 ~~D~vi~~v~~----------------~~~~~v~~~l~~~~~~~~~vi~~~ngv~ 109 (325)
T PRK00094 71 DADLILVAVPS----------------QALREVLKQLKPLLPPDAPIVWATKGIE 109 (325)
T ss_pred CCCEEEEeCCH----------------HHHHHHHHHHHhhcCCCCEEEEEeeccc
Confidence 99999998531 1223444455554335566777776543
No 237
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=98.02 E-value=3.9e-05 Score=78.92 Aligned_cols=146 Identities=18% Similarity=0.199 Sum_probs=94.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHH---HHHHHhc-----cc-CC-----CCcceEE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG---VKMELVD-----AA-FP-----LLKGVVA 71 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~---~~~dl~~-----~~-~~-----~~~~v~~ 71 (320)
.||+|+| +|.+|+.++..++..|+ +|+|+|+++ +.+.. ...+..+ .. .+ ....++.
T Consensus 336 ~~v~ViG-aG~MG~gIA~~~a~~G~-------~V~l~d~~~--~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~ 405 (737)
T TIGR02441 336 KTLAVLG-AGLMGAGIAQVSVDKGL-------KTVLKDATP--AGLDRGQQQVFKGLNKKVKRKKITSLERDSILSNLTP 405 (737)
T ss_pred cEEEEEC-CCHhHHHHHHHHHhCCC-------cEEEecCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE
Confidence 6899999 59999999999999997 899999974 22221 1111111 00 00 1256777
Q ss_pred eCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchh-hHHHHHHHCCCC--
Q 020875 72 TTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT-NALILKEFAPSI-- 148 (320)
Q Consensus 72 ~~~~~~al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~-~~~~~~~~~~~~-- 148 (320)
++++ +++++||+||-++ -+|.+.-+++...+.++++|++ |++||.+.+ ++.+... ...
T Consensus 406 ~~~~-~~~~~aDlViEAv--------------~E~l~~K~~vf~~l~~~~~~~~--ilasNTSsl~i~~la~~--~~~p~ 466 (737)
T TIGR02441 406 TLDY-SGFKNADMVIEAV--------------FEDLSLKHKVIKEVEAVVPPHC--IIASNTSALPIKDIAAV--SSRPE 466 (737)
T ss_pred eCCH-HHhccCCeehhhc--------------cccHHHHHHHHHHHHhhCCCCc--EEEEcCCCCCHHHHHhh--cCCcc
Confidence 7775 6899999999864 2345677899999999997765 577887765 3333332 222
Q ss_pred ---------CCC--c---EE--EeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 149 ---------PAK--N---IT--CLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 149 ---------~~~--~---i~--~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
|++ + |+ -.|.-++......+++.+|..|--++
T Consensus 467 r~ig~Hff~P~~~m~LvEvv~g~~Ts~~~~~~~~~~~~~lgk~pv~v~ 514 (737)
T TIGR02441 467 KVIGMHYFSPVDKMQLLEIITHDGTSKDTLASAVAVGLKQGKVVIVVK 514 (737)
T ss_pred ceEEEeccCCcccCceEEEeCCCCCCHHHHHHHHHHHHHCCCeEEEEC
Confidence 222 1 22 23556665556678888887654443
No 238
>PRK12747 short chain dehydrogenase; Provisional
Probab=98.02 E-value=0.00014 Score=64.72 Aligned_cols=157 Identities=15% Similarity=0.091 Sum_probs=88.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCC-------
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTD------- 74 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~------- 74 (320)
.++++||||+|++|.+++..|++.|. .|++.+.+. .+.++....++...... ...++....+
T Consensus 4 ~k~~lItGas~gIG~~ia~~l~~~G~-------~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 75 (252)
T PRK12747 4 GKVALVTGASRGIGRAIAKRLANDGA-------LVAIHYGNR-KEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSS 75 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-------eEEEEcCCC-HHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHH
Confidence 45899999999999999999999886 777765322 23333333333221100 0011111101
Q ss_pred hhhhc------CCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHH
Q 020875 75 AVEAC------TGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK 142 (320)
Q Consensus 75 ~~~al------~~aDvVi~~ag~~~~~---~~~---r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~ 142 (320)
..+.+ ...|++|+.||..... ..+ ....+..|+.....+++.+.+.-...+++|++|+-...
T Consensus 76 ~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~------ 149 (252)
T PRK12747 76 LDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATR------ 149 (252)
T ss_pred HHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccc------
Confidence 11111 2689999999864211 112 23456788877777776665542233577777754321
Q ss_pred HHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 143 ~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
.+.|..-.|+.++.-...+-+.+++.++ +..|+
T Consensus 150 ---~~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~gir 182 (252)
T PRK12747 150 ---ISLPDFIAYSMTKGAINTMTFTLAKQLG--ARGIT 182 (252)
T ss_pred ---cCCCCchhHHHHHHHHHHHHHHHHHHHh--HcCCE
Confidence 1223223467777767777777787765 34455
No 239
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=98.02 E-value=1.9e-05 Score=71.85 Aligned_cols=94 Identities=9% Similarity=0.098 Sum_probs=60.0
Q ss_pred EEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchh---HHHHHHHhcccCCCCcceEEeCChhhhc----
Q 020875 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEAL---NGVKMELVDAAFPLLKGVVATTDAVEAC---- 79 (320)
Q Consensus 7 kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~---~~~~~dl~~~~~~~~~~v~~~~~~~~al---- 79 (320)
||+|+||+|++|++++..|++.|+ +|+++.++++.... +....| +....++.+++
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~-------~V~~~~R~~~~~~~~~~~~~~~d-----------~~d~~~l~~a~~~~~ 62 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASV-------PFLVASRSSSSSAGPNEKHVKFD-----------WLDEDTWDNPFSSDD 62 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCC-------cEEEEeCCCccccCCCCcccccc-----------CCCHHHHHHHHhccc
Confidence 589999999999999999999887 78888886531110 111122 32233566666
Q ss_pred --CC-CcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEc
Q 020875 80 --TG-VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA 131 (320)
Q Consensus 80 --~~-aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~s 131 (320)
++ +|.|+++++... .. ....+++++++++.+ - .++|..|
T Consensus 63 ~~~g~~d~v~~~~~~~~----~~-------~~~~~~~i~aa~~~g-v-~~~V~~S 104 (285)
T TIGR03649 63 GMEPEISAVYLVAPPIP----DL-------APPMIKFIDFARSKG-V-RRFVLLS 104 (285)
T ss_pred CcCCceeEEEEeCCCCC----Ch-------hHHHHHHHHHHHHcC-C-CEEEEee
Confidence 67 999999875321 11 134456777777765 2 2455554
No 240
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=98.02 E-value=7.9e-05 Score=62.38 Aligned_cols=65 Identities=20% Similarity=0.359 Sum_probs=47.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDv 84 (320)
|+||+++| .|.+|+.++..|+..|+ +|..||+++ ++++ ++.+. ......+..++++++|+
T Consensus 1 m~~Ig~IG-lG~mG~~~a~~L~~~g~-------~v~~~d~~~--~~~~----~~~~~------g~~~~~s~~e~~~~~dv 60 (163)
T PF03446_consen 1 MMKIGFIG-LGNMGSAMARNLAKAGY-------EVTVYDRSP--EKAE----ALAEA------GAEVADSPAEAAEQADV 60 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTT-------EEEEEESSH--HHHH----HHHHT------TEEEESSHHHHHHHBSE
T ss_pred CCEEEEEc-hHHHHHHHHHHHHhcCC-------eEEeeccch--hhhh----hhHHh------hhhhhhhhhhHhhcccc
Confidence 57999999 79999999999999997 899999863 3332 23222 14555678899999999
Q ss_pred EEEeC
Q 020875 85 AVMVG 89 (320)
Q Consensus 85 Vi~~a 89 (320)
||.+.
T Consensus 61 vi~~v 65 (163)
T PF03446_consen 61 VILCV 65 (163)
T ss_dssp EEE-S
T ss_pred eEeec
Confidence 99874
No 241
>PRK06181 short chain dehydrogenase; Provisional
Probab=98.02 E-value=7.9e-05 Score=66.76 Aligned_cols=120 Identities=23% Similarity=0.190 Sum_probs=70.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCC---CcceEEeCChhhh----
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVEA---- 78 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~---~~~v~~~~~~~~a---- 78 (320)
++|+|+||+|++|.+++..|+++|. +|++++++. +..+....++....... ..++....+..++
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~-------~Vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 72 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGA-------QLVLAARNE--TRLASLAQELADHGGEALVVPTDVSDAEACERLIEAA 72 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 5799999999999999999998886 799999863 23332223332211100 1112111122222
Q ss_pred ---cCCCcEEEEeCCCCCCCC---C-CH---HHHHHhhHHHHHHHHHHHhhhcC-CCeEEEEEcCcc
Q 020875 79 ---CTGVNIAVMVGGFPRKEG---M-ER---KDVMSKNVSIYKAQASALEQHAA-PNCKVLVVANPA 134 (320)
Q Consensus 79 ---l~~aDvVi~~ag~~~~~~---~-~r---~~~~~~n~~~~~~i~~~i~~~~~-~~~~viv~snP~ 134 (320)
+.+.|+||+++|...... . +. .+.+..|+.....+++.+.++-. ...++|++|+..
T Consensus 73 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~ 139 (263)
T PRK06181 73 VARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLA 139 (263)
T ss_pred HHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEeccc
Confidence 236899999998643211 1 22 23477888888887777654311 124667776543
No 242
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=98.01 E-value=5.3e-05 Score=74.67 Aligned_cols=106 Identities=25% Similarity=0.325 Sum_probs=68.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHH-------HHhc-ccC------CCCcce
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKM-------ELVD-AAF------PLLKGV 69 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~-------dl~~-~~~------~~~~~v 69 (320)
+..||+|+| +|.+|+.++..++..|+ +|+++|+++ +.++.... .+.. ... ....++
T Consensus 4 ~~~kV~VIG-aG~MG~gIA~~la~aG~-------~V~l~d~~~--e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i 73 (503)
T TIGR02279 4 NVVTVAVIG-AGAMGAGIAQVAASAGH-------QVLLYDIRA--EALARAIAGIEARLNSLVTKGKLTAEECERTLKRL 73 (503)
T ss_pred CccEEEEEC-cCHHHHHHHHHHHhCCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhcc
Confidence 346999999 59999999999999998 899999974 33321110 1111 100 012456
Q ss_pred EEeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchh
Q 020875 70 VATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136 (320)
Q Consensus 70 ~~~~~~~~al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~ 136 (320)
+.++++ +++++||+||.+.- .+...-+.+...+.+++++++ |+.||.+.+
T Consensus 74 ~~~~~~-~~l~~aDlVIEav~--------------E~~~vK~~vf~~l~~~~~~~~--IlasnTStl 123 (503)
T TIGR02279 74 IPVTDL-HALADAGLVIEAIV--------------ENLEVKKALFAQLEELCPADT--IIASNTSSL 123 (503)
T ss_pred EEeCCH-HHhCCCCEEEEcCc--------------CcHHHHHHHHHHHHhhCCCCe--EEEECCCCC
Confidence 677776 67899999999752 122344556666778875554 567776554
No 243
>PRK06914 short chain dehydrogenase; Provisional
Probab=98.01 E-value=5.8e-05 Score=68.36 Aligned_cols=146 Identities=11% Similarity=0.098 Sum_probs=79.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhccc--CC---CCcceEEeCChh----
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA--FP---LLKGVVATTDAV---- 76 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~--~~---~~~~v~~~~~~~---- 76 (320)
++++||||+|++|++++..|+++|+ .|++++++. +.++....++.... .. ...++....+..
T Consensus 4 k~~lItGasg~iG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~ 74 (280)
T PRK06914 4 KIAIVTGASSGFGLLTTLELAKKGY-------LVIATMRNP--EKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQL 74 (280)
T ss_pred CEEEEECCCchHHHHHHHHHHhCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHH
Confidence 4799999999999999999999887 788888764 22322222222111 00 011222111111
Q ss_pred --hhcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHH----hhhcCCCeEEEEEcCcchhhHHHHHHH
Q 020875 77 --EACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASAL----EQHAAPNCKVLVVANPANTNALILKEF 144 (320)
Q Consensus 77 --~al~~aDvVi~~ag~~~~~---~~~---r~~~~~~n~~~~~~i~~~i----~~~~~~~~~viv~snP~~~~~~~~~~~ 144 (320)
+.+...|+||+++|..... ..+ ..+.+..|+.....+++.+ ++.. ...++++|+-...
T Consensus 75 ~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~iv~vsS~~~~-------- 144 (280)
T PRK06914 75 VLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK--SGKIINISSISGR-------- 144 (280)
T ss_pred HHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CCEEEEECccccc--------
Confidence 2234679999999875421 111 2345667877766666664 4443 2456666543211
Q ss_pred CCCCCCCcEEEeehhhHHHHHHHHHHH
Q 020875 145 APSIPAKNITCLTRLDHNRALGQISEK 171 (320)
Q Consensus 145 ~~~~~~~~i~~~t~ld~~r~~~~~a~~ 171 (320)
.+.+..-.++.++.....+...++..
T Consensus 145 -~~~~~~~~Y~~sK~~~~~~~~~l~~~ 170 (280)
T PRK06914 145 -VGFPGLSPYVSSKYALEGFSESLRLE 170 (280)
T ss_pred -CCCCCCchhHHhHHHHHHHHHHHHHH
Confidence 12233334555555544555555544
No 244
>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional
Probab=98.01 E-value=9e-05 Score=69.97 Aligned_cols=110 Identities=16% Similarity=0.253 Sum_probs=68.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHh--cccC------CCCcceEEeCCh
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELV--DAAF------PLLKGVVATTDA 75 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~--~~~~------~~~~~v~~~~~~ 75 (320)
+++||+|+| +|..|++++..|..++........+|.++.+++..+. +....++. +... +++.++..++++
T Consensus 10 ~~~ki~ViG-aG~wGtAlA~~l~~n~~~~~~~~~~V~lw~~~~~~~~-~~~~~~in~~~~N~~ylp~~~Lp~ni~~tsdl 87 (365)
T PTZ00345 10 GPLKVSVIG-SGNWGSAISKVVGENTQRNYIFHNEVRMWVLEEIVEG-EKLSDIINTKHENVKYLPGIKLPDNIVAVSDL 87 (365)
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHhcCCcccCCCCeEEEEEecccccc-hHHHHHHHhcCCCcccCCCCcCCCceEEecCH
Confidence 468999999 6999999999999886210000017888888642100 11222333 2221 234678888898
Q ss_pred hhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhh--hcCCCeEEEEEc
Q 020875 76 VEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQ--HAAPNCKVLVVA 131 (320)
Q Consensus 76 ~~al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~--~~~~~~~viv~s 131 (320)
.++++++|+||++. |. +.++++++.++. +-+++..+|.++
T Consensus 88 ~eav~~aDiIvlAV--Ps--------------q~l~~vl~~l~~~~~l~~~~~iIS~a 129 (365)
T PTZ00345 88 KEAVEDADLLIFVI--PH--------------QFLESVLSQIKENNNLKKHARAISLT 129 (365)
T ss_pred HHHHhcCCEEEEEc--Ch--------------HHHHHHHHHhccccccCCCCEEEEEe
Confidence 89999999999874 21 345666777765 332344455443
No 245
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=98.00 E-value=6.2e-05 Score=74.31 Aligned_cols=104 Identities=16% Similarity=0.233 Sum_probs=65.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHH---HHHH-----hcccC------CCCcce
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGV---KMEL-----VDAAF------PLLKGV 69 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~---~~dl-----~~~~~------~~~~~v 69 (320)
+..||+|+| +|.+|+.++..++..|+ +|+++|+++ +.++.. ..+. ..... .....+
T Consensus 6 ~i~~V~VIG-aG~MG~gIA~~la~aG~-------~V~l~D~~~--e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i 75 (507)
T PRK08268 6 SIATVAVIG-AGAMGAGIAQVAAQAGH-------TVLLYDARA--GAAAAARDGIAARLAKLVEKGKLTAEQADAALARL 75 (507)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCe
Confidence 347999999 59999999999999997 899999974 333221 1111 11100 012346
Q ss_pred EEeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcc
Q 020875 70 VATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPA 134 (320)
Q Consensus 70 ~~~~~~~~al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~ 134 (320)
+.++++ +++++||+||.+.- .+.+.-+.+...+.+.+++++ |++||.+
T Consensus 76 ~~~~~~-~~~~~aDlViEav~--------------E~~~vK~~vf~~l~~~~~~~a--ilasntS 123 (507)
T PRK08268 76 RPVEAL-ADLADCDLVVEAIV--------------ERLDVKQALFAQLEAIVSPDC--ILATNTS 123 (507)
T ss_pred EEeCCH-HHhCCCCEEEEcCc--------------ccHHHHHHHHHHHHhhCCCCc--EEEECCC
Confidence 777765 56899999998742 122333455556777775555 3445543
No 246
>PRK06841 short chain dehydrogenase; Provisional
Probab=98.00 E-value=5.5e-05 Score=67.41 Aligned_cols=151 Identities=18% Similarity=0.171 Sum_probs=83.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC-CCCcceEEeCChhhh----
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVEA---- 78 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~~~~~~a---- 78 (320)
+.++|+|+||+|.+|++++..|+++|. +|++.++++. . .....++..... ....++....+..+.
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-------~Vi~~~r~~~--~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-------RVALLDRSED--V-AEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAV 83 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCHH--H-HHHHHHhhCCceEEEEecCCCHHHHHHHHHHH
Confidence 346899999999999999999999886 7899998642 1 111222211100 001112111112222
Q ss_pred ---cCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEEcCcchhhHHHHHHHCCC
Q 020875 79 ---CTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEFAPS 147 (320)
Q Consensus 79 ---l~~aDvVi~~ag~~~~~~---~~---r~~~~~~n~~~~~~i~~~i~~~~--~~~~~viv~snP~~~~~~~~~~~~~~ 147 (320)
+...|+||+.+|...... .+ ....+..|+.....+.+.+..+. ....++|++|+-... .+
T Consensus 84 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~---------~~ 154 (255)
T PRK06841 84 ISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGV---------VA 154 (255)
T ss_pred HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhc---------cC
Confidence 346799999998743211 11 22356778777777777665431 023567777643211 12
Q ss_pred CCCCcEEEeehhhHHHHHHHHHHHcC
Q 020875 148 IPAKNITCLTRLDHNRALGQISEKLN 173 (320)
Q Consensus 148 ~~~~~i~~~t~ld~~r~~~~~a~~l~ 173 (320)
.+..-.|+.++.....+-..+|+.+.
T Consensus 155 ~~~~~~Y~~sK~a~~~~~~~la~e~~ 180 (255)
T PRK06841 155 LERHVAYCASKAGVVGMTKVLALEWG 180 (255)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 22222455555554555666666654
No 247
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=97.99 E-value=8.3e-05 Score=66.41 Aligned_cols=158 Identities=14% Similarity=0.083 Sum_probs=89.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCC---CcceEEeCChh----
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAV---- 76 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~---~~~v~~~~~~~---- 76 (320)
+.++|.|+||+|++|++++..|++.|. ++++.+++. +.++....++.+..... ..++....+..
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-------~vv~~~r~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~ 80 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-------SVVVSDINA--DAANHVVDEIQQLGGQAFACRCDITSEQELSALAD 80 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence 357999999999999999999999886 788888763 33333333333221110 11222111222
Q ss_pred ---hhcCCCcEEEEeCCCCCC--CCCCHH---HHHHhhHHHHHHHHHHHhhhc--CCCeEEEEEcCcchhhHHHHHHHCC
Q 020875 77 ---EACTGVNIAVMVGGFPRK--EGMERK---DVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEFAP 146 (320)
Q Consensus 77 ---~al~~aDvVi~~ag~~~~--~~~~r~---~~~~~n~~~~~~i~~~i~~~~--~~~~~viv~snP~~~~~~~~~~~~~ 146 (320)
+.+...|++|+++|.... ...+.. +.+..|+.....+.+.+..+- .....+|++|+.... .
T Consensus 81 ~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~---------~ 151 (255)
T PRK06113 81 FALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAE---------N 151 (255)
T ss_pred HHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEeccccc---------C
Confidence 223467999999986432 122222 346788887777777765321 022467777653311 1
Q ss_pred CCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 147 ~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
+.+..-.|+.++.-...+.+.+++.+. +..|+.
T Consensus 152 ~~~~~~~Y~~sK~a~~~~~~~la~~~~--~~~i~v 184 (255)
T PRK06113 152 KNINMTSYASSKAAASHLVRNMAFDLG--EKNIRV 184 (255)
T ss_pred CCCCcchhHHHHHHHHHHHHHHHHHhh--hhCeEE
Confidence 222222456665555556566666653 456663
No 248
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=97.98 E-value=7.6e-05 Score=68.60 Aligned_cols=104 Identities=24% Similarity=0.279 Sum_probs=61.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHH-------HHHhcccC--C-----CCcceE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVK-------MELVDAAF--P-----LLKGVV 70 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~-------~dl~~~~~--~-----~~~~v~ 70 (320)
..||+|+| +|.+|+.++..|+..|+ +|+++|+++ ++++... ..+..... . ....+.
T Consensus 4 ~~~V~vIG-~G~mG~~iA~~l~~~G~-------~V~~~d~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 73 (295)
T PLN02545 4 IKKVGVVG-AGQMGSGIAQLAAAAGM-------DVWLLDSDP--AALSRGLDSISSSLARLVKKGKMSQEEADATLGRIR 73 (295)
T ss_pred cCEEEEEC-CCHHHHHHHHHHHhcCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceE
Confidence 46899999 69999999999999886 899999874 2222100 01111100 0 012344
Q ss_pred EeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcch
Q 020875 71 ATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN 135 (320)
Q Consensus 71 ~~~~~~~al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~ 135 (320)
..++ .+++++||+||.+.- . +.+....+...+.+..+++++ ++||...
T Consensus 74 ~~~~-~~~~~~aD~Vieav~--e------------~~~~k~~v~~~l~~~~~~~~i--l~s~tS~ 121 (295)
T PLN02545 74 CTTN-LEELRDADFIIEAIV--E------------SEDLKKKLFSELDRICKPSAI--LASNTSS 121 (295)
T ss_pred eeCC-HHHhCCCCEEEEcCc--c------------CHHHHHHHHHHHHhhCCCCcE--EEECCCC
Confidence 4445 467899999999752 1 112334455556666545653 3344443
No 249
>PRK06114 short chain dehydrogenase; Provisional
Probab=97.98 E-value=9.7e-05 Score=65.98 Aligned_cols=159 Identities=14% Similarity=0.122 Sum_probs=85.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhh--
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA-- 78 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~a-- 78 (320)
+.++++|+||+|.+|++++..|++.|. ++++.+++.. ..+.....++.+.... ...++....+..++
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-------~v~~~~r~~~-~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~ 78 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-------DVALFDLRTD-DGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVA 78 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCcc-hHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence 446899999999999999999999987 7889988642 2223222333321110 11122221122222
Q ss_pred -----cCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEEcCcchhhHHHHHHHC
Q 020875 79 -----CTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEFA 145 (320)
Q Consensus 79 -----l~~aDvVi~~ag~~~~~~---~~---r~~~~~~n~~~~~~i~~~i~~~~--~~~~~viv~snP~~~~~~~~~~~~ 145 (320)
+...|++|+.||...... .+ ....+..|+.....+.+.+.+.. .....+|++|+.....
T Consensus 79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-------- 150 (254)
T PRK06114 79 RTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGII-------- 150 (254)
T ss_pred HHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcC--------
Confidence 334699999999753211 11 23456677776655544443221 1235677776533211
Q ss_pred CCCCC--CcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 146 PSIPA--KNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 146 ~~~~~--~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
+.+. ...|+.++.-...+-+.+|+.+. +..|+.
T Consensus 151 -~~~~~~~~~Y~~sKaa~~~l~~~la~e~~--~~gi~v 185 (254)
T PRK06114 151 -VNRGLLQAHYNASKAGVIHLSKSLAMEWV--GRGIRV 185 (254)
T ss_pred -CCCCCCcchHHHHHHHHHHHHHHHHHHHh--hcCeEE
Confidence 1111 12355555544456666776654 345653
No 250
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=97.97 E-value=7.3e-05 Score=70.02 Aligned_cols=108 Identities=21% Similarity=0.219 Sum_probs=62.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC-C---CCcceEEeCChhhhcC
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-P---LLKGVVATTDAVEACT 80 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~-~---~~~~v~~~~~~~~al~ 80 (320)
+|||+|+| +|.+|+.++..|.+.|+ +|.++|+++..+.+......+.+... . ...++..+++. ++++
T Consensus 2 ~mkI~IiG-~G~mG~~~A~~L~~~G~-------~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 72 (341)
T PRK08229 2 MARICVLG-AGSIGCYLGGRLAAAGA-------DVTLIGRARIGDELRAHGLTLTDYRGRDVRVPPSAIAFSTDP-AALA 72 (341)
T ss_pred CceEEEEC-CCHHHHHHHHHHHhcCC-------cEEEEecHHHHHHHHhcCceeecCCCcceecccceeEeccCh-hhcc
Confidence 47899999 69999999999999987 79999985211111100000100000 0 01224444454 6789
Q ss_pred CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhh
Q 020875 81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTN 137 (320)
Q Consensus 81 ~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~ 137 (320)
++|+||++...+. ..++++.+.....++..++..+|..+..
T Consensus 73 ~~D~vil~vk~~~----------------~~~~~~~l~~~~~~~~iii~~~nG~~~~ 113 (341)
T PRK08229 73 TADLVLVTVKSAA----------------TADAAAALAGHARPGAVVVSFQNGVRNA 113 (341)
T ss_pred CCCEEEEEecCcc----------------hHHHHHHHHhhCCCCCEEEEeCCCCCcH
Confidence 9999999863221 1223344444433556677778876543
No 251
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=97.97 E-value=8.6e-05 Score=68.71 Aligned_cols=75 Identities=21% Similarity=0.240 Sum_probs=51.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHH----H---HHhcccC-------CCCcceE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVK----M---ELVDAAF-------PLLKGVV 70 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~----~---dl~~~~~-------~~~~~v~ 70 (320)
.+||+|+| +|.+|+.++..|+..|+ +|+++|+++ +.++... . .+.+... ....+++
T Consensus 2 ~~~V~VIG-~G~mG~~iA~~la~~G~-------~V~v~d~~~--~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~ 71 (308)
T PRK06129 2 MGSVAIIG-AGLIGRAWAIVFARAGH-------EVRLWDADP--AAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIR 71 (308)
T ss_pred CcEEEEEC-ccHHHHHHHHHHHHCCC-------eeEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeE
Confidence 35899999 69999999999999987 899999874 2222110 0 1111110 1123467
Q ss_pred EeCChhhhcCCCcEEEEeC
Q 020875 71 ATTDAVEACTGVNIAVMVG 89 (320)
Q Consensus 71 ~~~~~~~al~~aDvVi~~a 89 (320)
.++++.+++++||+|+.+.
T Consensus 72 ~~~~~~~a~~~ad~Vi~av 90 (308)
T PRK06129 72 VTDSLADAVADADYVQESA 90 (308)
T ss_pred EECcHHHhhCCCCEEEECC
Confidence 7778888899999999875
No 252
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional
Probab=97.97 E-value=0.00021 Score=68.21 Aligned_cols=114 Identities=19% Similarity=0.202 Sum_probs=67.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC------------CCcceEEeC
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP------------LLKGVVATT 73 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~------------~~~~v~~~~ 73 (320)
|||+|+| .|++|..++..++. |+ +|+.+|+++ ++++. +.....+ ....++.+.
T Consensus 1 mkI~VIG-lGyvGl~~A~~lA~-G~-------~VigvD~d~--~kv~~----l~~g~~~~~e~~l~~~l~~~~~~l~~t~ 65 (388)
T PRK15057 1 MKITISG-TGYVGLSNGLLIAQ-NH-------EVVALDILP--SRVAM----LNDRISPIVDKEIQQFLQSDKIHFNATL 65 (388)
T ss_pred CEEEEEC-CCHHHHHHHHHHHh-CC-------cEEEEECCH--HHHHH----HHcCCCCCCCcCHHHHHHhCCCcEEEec
Confidence 5899999 79999999977664 76 899999974 33332 2221111 123455666
Q ss_pred ChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEc-CcchhhHHH
Q 020875 74 DAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA-NPANTNALI 140 (320)
Q Consensus 74 ~~~~al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~s-nP~~~~~~~ 140 (320)
+..++.++||+||++...+....... .+...+++.++.+.+. .++..+|+-| -|.+..-.+
T Consensus 66 ~~~~~~~~ad~vii~Vpt~~~~k~~~-----~dl~~v~~v~~~i~~~-~~g~lVV~~STv~pgtt~~l 127 (388)
T PRK15057 66 DKNEAYRDADYVIIATPTDYDPKTNY-----FNTSSVESVIKDVVEI-NPYAVMVIKSTVPVGFTAAM 127 (388)
T ss_pred chhhhhcCCCEEEEeCCCCCccCCCC-----cChHHHHHHHHHHHhc-CCCCEEEEeeecCCchHHHH
Confidence 67788899999999976653211111 1223344444555443 2444444443 466554444
No 253
>PRK07454 short chain dehydrogenase; Provisional
Probab=97.97 E-value=5.1e-05 Score=67.09 Aligned_cols=122 Identities=18% Similarity=0.183 Sum_probs=69.6
Q ss_pred CCCCC-CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChh
Q 020875 1 MAKEP-VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAV 76 (320)
Q Consensus 1 m~~~~-~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~ 76 (320)
|..+. ++++|+||+|.+|..++..|+++|. .|+++++++ +.+.....++...... ...++....+..
T Consensus 1 ~~~~~~k~vlItG~sg~iG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 71 (241)
T PRK07454 1 MSLNSMPRALITGASSGIGKATALAFAKAGW-------DLALVARSQ--DALEALAAELRSTGVKAAAYSIDLSNPEAIA 71 (241)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhCCCcEEEEEccCCCHHHHH
Confidence 55544 5799999999999999999999886 799999864 2232222222211100 112222212222
Q ss_pred hh-------cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHH----HhhhcCCCeEEEEEcCc
Q 020875 77 EA-------CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASA----LEQHAAPNCKVLVVANP 133 (320)
Q Consensus 77 ~a-------l~~aDvVi~~ag~~~~~---~~~---r~~~~~~n~~~~~~i~~~----i~~~~~~~~~viv~snP 133 (320)
.+ +...|+||+++|..... ..+ ....+..|+.....+.+. +.+.. ..++|++|+.
T Consensus 72 ~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~isS~ 143 (241)
T PRK07454 72 PGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG--GGLIINVSSI 143 (241)
T ss_pred HHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC--CcEEEEEccH
Confidence 22 23589999999874321 111 234566777655554444 44432 3567777754
No 254
>PRK09134 short chain dehydrogenase; Provisional
Probab=97.97 E-value=3.9e-05 Score=68.66 Aligned_cols=152 Identities=15% Similarity=0.095 Sum_probs=82.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhhc--
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEAC-- 79 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~al-- 79 (320)
.++++|+||+|++|.+++..|++.|. .+++.++.. .+.+......+...... ...++....+..+++
T Consensus 9 ~k~vlItGas~giG~~la~~l~~~g~-------~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 80 (258)
T PRK09134 9 PRAALVTGAARRIGRAIALDLAAHGF-------DVAVHYNRS-RDEAEALAAEIRALGRRAVALQADLADEAEVRALVAR 80 (258)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCC-HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH
Confidence 46899999999999999999999886 677766532 12222222222211110 111222222222222
Q ss_pred -----CCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHhhhcC--CCeEEEEEcCcchhhHHHHHHHCC
Q 020875 80 -----TGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHAA--PNCKVLVVANPANTNALILKEFAP 146 (320)
Q Consensus 80 -----~~aDvVi~~ag~~~~~---~~~---r~~~~~~n~~~~~~i~~~i~~~~~--~~~~viv~snP~~~~~~~~~~~~~ 146 (320)
...|+|||+||..... ..+ ....+..|+.....+++.+.++.. ...++++++... . . .
T Consensus 81 ~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~-~-----~---~ 151 (258)
T PRK09134 81 ASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQR-V-----W---N 151 (258)
T ss_pred HHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchh-h-----c---C
Confidence 3479999999864321 112 244677888877777777665431 124555554321 0 0 1
Q ss_pred CCCCCcEEEeehhhHHHHHHHHHHHcC
Q 020875 147 SIPAKNITCLTRLDHNRALGQISEKLN 173 (320)
Q Consensus 147 ~~~~~~i~~~t~ld~~r~~~~~a~~l~ 173 (320)
..|....|+.++.....+-+.+++.++
T Consensus 152 ~~p~~~~Y~~sK~a~~~~~~~la~~~~ 178 (258)
T PRK09134 152 LNPDFLSYTLSKAALWTATRTLAQALA 178 (258)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 112112356666555566666777664
No 255
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=97.97 E-value=0.00013 Score=66.07 Aligned_cols=154 Identities=12% Similarity=0.099 Sum_probs=85.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC---CCCcceEEeCChhh----
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF---PLLKGVVATTDAVE---- 77 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~---~~~~~v~~~~~~~~---- 77 (320)
.++++|+||+|.+|++++..|+..|. .|++++++. +.++....++.+... ....++....+..+
T Consensus 10 ~k~vlVtGas~giG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~ 80 (278)
T PRK08277 10 GKVAVITGGGGVLGGAMAKELARAGA-------KVAILDRNQ--EKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQ 80 (278)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence 36899999999999999999999887 799999864 333333333322110 01112211111111
Q ss_pred ---hcCCCcEEEEeCCCCCCC------------------CCC---HHHHHHhhHHHHH----HHHHHHhhhcCCCeEEEE
Q 020875 78 ---ACTGVNIAVMVGGFPRKE------------------GME---RKDVMSKNVSIYK----AQASALEQHAAPNCKVLV 129 (320)
Q Consensus 78 ---al~~aDvVi~~ag~~~~~------------------~~~---r~~~~~~n~~~~~----~i~~~i~~~~~~~~~viv 129 (320)
.+...|++|++||..... ..+ ....+..|+.... .+.+.+.+.. .+.+|+
T Consensus 81 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~ii~ 158 (278)
T PRK08277 81 ILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK--GGNIIN 158 (278)
T ss_pred HHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC--CcEEEE
Confidence 234789999999853211 011 2234556665444 4445554432 356777
Q ss_pred EcCcchhhHHHHHHHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 130 VANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 130 ~snP~~~~~~~~~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
+|+-... ...+..-.|+.++.-...+.+.++..+.- ..++
T Consensus 159 isS~~~~---------~~~~~~~~Y~~sK~a~~~l~~~la~e~~~--~gir 198 (278)
T PRK08277 159 ISSMNAF---------TPLTKVPAYSAAKAAISNFTQWLAVHFAK--VGIR 198 (278)
T ss_pred Eccchhc---------CCCCCCchhHHHHHHHHHHHHHHHHHhCc--cCeE
Confidence 7743211 12222224666666555666677777653 4555
No 256
>PRK07775 short chain dehydrogenase; Provisional
Probab=97.96 E-value=8.5e-05 Score=67.28 Aligned_cols=150 Identities=11% Similarity=0.022 Sum_probs=82.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhh---
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA--- 78 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~a--- 78 (320)
++.++|+||+|++|++++..|+.+|. +|++.+++. +.+.....++...... ...+++...+..++
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 80 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAAGF-------PVALGARRV--EKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQ 80 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence 35799999999999999999999887 788888753 2232222222111100 01122222222222
Q ss_pred ----cCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEEcCcchhhHHHHHHHCC
Q 020875 79 ----CTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEFAP 146 (320)
Q Consensus 79 ----l~~aDvVi~~ag~~~~~~---~~---r~~~~~~n~~~~~~i~~~i~~~~--~~~~~viv~snP~~~~~~~~~~~~~ 146 (320)
+...|+||+.||...... .+ ..+.+..|+.....+.+.+.... ....++|++|+-.. ..
T Consensus 81 ~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~---------~~ 151 (274)
T PRK07775 81 AEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVA---------LR 151 (274)
T ss_pred HHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHh---------cC
Confidence 346899999998743211 12 22345677776766666653211 01245666665321 11
Q ss_pred CCCCCcEEEeehhhHHHHHHHHHHHc
Q 020875 147 SIPAKNITCLTRLDHNRALGQISEKL 172 (320)
Q Consensus 147 ~~~~~~i~~~t~ld~~r~~~~~a~~l 172 (320)
+.|....|+.++.....+...+++.+
T Consensus 152 ~~~~~~~Y~~sK~a~~~l~~~~~~~~ 177 (274)
T PRK07775 152 QRPHMGAYGAAKAGLEAMVTNLQMEL 177 (274)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHh
Confidence 22322346666666666777777665
No 257
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=97.96 E-value=8e-05 Score=65.43 Aligned_cols=154 Identities=15% Similarity=0.139 Sum_probs=86.6
Q ss_pred EEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhhc-----
Q 020875 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEAC----- 79 (320)
Q Consensus 8 I~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~al----- 79 (320)
|+|+||+|++|++++..|+++|+ ++++++++.. +.+.....++.+.... ...++....++.+++
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~-------~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 72 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGA-------KVIITYRSSE-EGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEE 72 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCch-hHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 57999999999999999999887 7888887531 2233333333322111 111222222222333
Q ss_pred --CCCcEEEEeCCCCCCC---C---CCHHHHHHhhHHHHHHHHHHHhhhcC--CCeEEEEEcCcchhhHHHHHHHCCCCC
Q 020875 80 --TGVNIAVMVGGFPRKE---G---MERKDVMSKNVSIYKAQASALEQHAA--PNCKVLVVANPANTNALILKEFAPSIP 149 (320)
Q Consensus 80 --~~aDvVi~~ag~~~~~---~---~~r~~~~~~n~~~~~~i~~~i~~~~~--~~~~viv~snP~~~~~~~~~~~~~~~~ 149 (320)
...|+||+.+|..... . ....+.+..|+.....+.+.+.++.. ...+++++|..... .+.|
T Consensus 73 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~---------~g~~ 143 (239)
T TIGR01830 73 ELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGL---------MGNA 143 (239)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCcccc---------CCCC
Confidence 3469999999864321 1 12344677888888888887765421 23467777654321 1223
Q ss_pred CCcEEEeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 150 AKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 150 ~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
....++.++.-...+...+++.++ +..++
T Consensus 144 ~~~~y~~~k~a~~~~~~~l~~~~~--~~g~~ 172 (239)
T TIGR01830 144 GQANYAASKAGVIGFTKSLAKELA--SRNIT 172 (239)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHh--hcCeE
Confidence 222455555544455555666654 23454
No 258
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=97.96 E-value=9.8e-05 Score=71.18 Aligned_cols=110 Identities=18% Similarity=0.166 Sum_probs=67.1
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCC--------------C
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL--------------L 66 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~--------------~ 66 (320)
|+ ++||+|+| .|++|..++..|++.|+ +|..+|+++ ++++. +.....+. .
T Consensus 1 m~--~~kI~VIG-lG~~G~~~A~~La~~G~-------~V~~~D~~~--~~v~~----l~~g~~~~~e~~l~~~l~~~~~~ 64 (415)
T PRK11064 1 MS--FETISVIG-LGYIGLPTAAAFASRQK-------QVIGVDINQ--HAVDT----INRGEIHIVEPDLDMVVKTAVEG 64 (415)
T ss_pred CC--ccEEEEEC-cchhhHHHHHHHHhCCC-------EEEEEeCCH--HHHHH----HHCCCCCcCCCCHHHHHHHHhhc
Confidence 55 57999999 79999999999999997 899999874 34432 21111110 1
Q ss_pred cceEEeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEc-Ccchh
Q 020875 67 KGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA-NPANT 136 (320)
Q Consensus 67 ~~v~~~~~~~~al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~s-nP~~~ 136 (320)
..+..+++ +++||+||++...|.....+ .++..+...++.+.++..++.++|.-| .|.+.
T Consensus 65 g~l~~~~~----~~~aDvvii~vptp~~~~~~------~dl~~v~~~~~~i~~~l~~g~iVI~~STv~pgt 125 (415)
T PRK11064 65 GYLRATTT----PEPADAFLIAVPTPFKGDHE------PDLTYVEAAAKSIAPVLKKGDLVILESTSPVGA 125 (415)
T ss_pred Cceeeecc----cccCCEEEEEcCCCCCCCCC------cChHHHHHHHHHHHHhCCCCCEEEEeCCCCCCH
Confidence 22333332 45899999998877533221 123344555556655543445555554 45544
No 259
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.96 E-value=8.5e-05 Score=65.85 Aligned_cols=39 Identities=23% Similarity=0.374 Sum_probs=34.0
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCC
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~ 46 (320)
|..+..+++|+||+|++|..++..|+++|. .|+++++++
T Consensus 1 ~~~~~~~~lItG~~g~iG~~~a~~l~~~G~-------~vi~~~r~~ 39 (253)
T PRK08217 1 MDLKDKVIVITGGAQGLGRAMAEYLAQKGA-------KLALIDLNQ 39 (253)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCH
Confidence 666667999999999999999999999886 788999864
No 260
>PRK09291 short chain dehydrogenase; Provisional
Probab=97.95 E-value=0.00012 Score=65.21 Aligned_cols=147 Identities=14% Similarity=0.152 Sum_probs=78.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCC---CcceEEeCChhhhcC-C
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVEACT-G 81 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~---~~~v~~~~~~~~al~-~ 81 (320)
++|+||||+|.+|++++..|++.|. .+++.+++. +.+.....+........ ..++....+..+++. +
T Consensus 3 ~~vlVtGasg~iG~~ia~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 73 (257)
T PRK09291 3 KTILITGAGSGFGREVALRLARKGH-------NVIAGVQIA--PQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWD 73 (257)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCC
Confidence 4799999999999999999999886 788888753 22221111111111111 112222223444454 8
Q ss_pred CcEEEEeCCCCCCCC---CCH---HHHHHhhHHHHHH----HHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCC
Q 020875 82 VNIAVMVGGFPRKEG---MER---KDVMSKNVSIYKA----QASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAK 151 (320)
Q Consensus 82 aDvVi~~ag~~~~~~---~~r---~~~~~~n~~~~~~----i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~ 151 (320)
.|+||+.||...... .+. ...+..|+..... +.+.+.+.. . .++|++|+-... .+.|..
T Consensus 74 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~-~~iv~~SS~~~~---------~~~~~~ 142 (257)
T PRK09291 74 VDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG-K-GKVVFTSSMAGL---------ITGPFT 142 (257)
T ss_pred CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C-ceEEEEcChhhc---------cCCCCc
Confidence 999999998753211 112 2244556654444 344444443 2 467777643211 112222
Q ss_pred cEEEeehhhHHHHHHHHHHHc
Q 020875 152 NITCLTRLDHNRALGQISEKL 172 (320)
Q Consensus 152 ~i~~~t~ld~~r~~~~~a~~l 172 (320)
..++.++....++...+++.+
T Consensus 143 ~~Y~~sK~a~~~~~~~l~~~~ 163 (257)
T PRK09291 143 GAYCASKHALEAIAEAMHAEL 163 (257)
T ss_pred chhHHHHHHHHHHHHHHHHHH
Confidence 245555555555555555543
No 261
>PRK07035 short chain dehydrogenase; Provisional
Probab=97.95 E-value=0.00011 Score=65.32 Aligned_cols=159 Identities=13% Similarity=0.052 Sum_probs=86.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhh-
Q 020875 2 AKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE- 77 (320)
Q Consensus 2 ~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~- 77 (320)
..+.++|+|+||+|++|.+++..|++.|. .|++++++. +.++....++.+.... ...++....+..+
T Consensus 5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~-------~Vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 75 (252)
T PRK07035 5 DLTGKIALVTGASRGIGEAIAKLLAQQGA-------HVIVSSRKL--DGCQAVADAIVAAGGKAEALACHIGEMEQIDAL 75 (252)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence 33456899999999999999999999886 799999863 3333333333321110 0011111111211
Q ss_pred ------hcCCCcEEEEeCCCCC--CC--CCC---HHHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEEcCcchhhHHHHH
Q 020875 78 ------ACTGVNIAVMVGGFPR--KE--GME---RKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILK 142 (320)
Q Consensus 78 ------al~~aDvVi~~ag~~~--~~--~~~---r~~~~~~n~~~~~~i~~~i~~~~--~~~~~viv~snP~~~~~~~~~ 142 (320)
.+...|++|+.+|... .+ ..+ ....+..|+.....+.+.+.++. ....+++++|+....
T Consensus 76 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~------ 149 (252)
T PRK07035 76 FAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGV------ 149 (252)
T ss_pred HHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhc------
Confidence 2345899999998521 11 122 22356677776665555543321 023566666643211
Q ss_pred HHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 143 ~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
...+..-.|+.++.-...+...+++.++ +..|+
T Consensus 150 ---~~~~~~~~Y~~sK~al~~~~~~l~~e~~--~~gi~ 182 (252)
T PRK07035 150 ---SPGDFQGIYSITKAAVISMTKAFAKECA--PFGIR 182 (252)
T ss_pred ---CCCCCCcchHHHHHHHHHHHHHHHHHHh--hcCEE
Confidence 1122222456665555556666666654 34555
No 262
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=97.95 E-value=0.00015 Score=66.53 Aligned_cols=108 Identities=16% Similarity=0.166 Sum_probs=62.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcc-cCCCCcceEEeCChhhhcCCCcE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-AFPLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~-~~~~~~~v~~~~~~~~al~~aDv 84 (320)
|||+|+| +|.+|+.++..|.+.|+ +|.++++++ +.++....+-... ............+..+ ++++|+
T Consensus 1 m~I~IiG-~G~~G~~~a~~L~~~g~-------~V~~~~r~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~d~ 69 (304)
T PRK06522 1 MKIAILG-AGAIGGLFGAALAQAGH-------DVTLVARRG--AHLDALNENGLRLEDGEITVPVLAADDPAE-LGPQDL 69 (304)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCC-------eEEEEECCh--HHHHHHHHcCCcccCCceeecccCCCChhH-cCCCCE
Confidence 6899999 59999999999999886 899999853 2222211100000 0000011112233433 489999
Q ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHH
Q 020875 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI 140 (320)
Q Consensus 85 Vi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~ 140 (320)
||++.... ...++++.+..+-.++..+|...|.++....+
T Consensus 70 vila~k~~----------------~~~~~~~~l~~~l~~~~~iv~~~nG~~~~~~l 109 (304)
T PRK06522 70 VILAVKAY----------------QLPAALPSLAPLLGPDTPVLFLQNGVGHLEEL 109 (304)
T ss_pred EEEecccc----------------cHHHHHHHHhhhcCCCCEEEEecCCCCcHHHH
Confidence 99986321 12334445554433556788888987654433
No 263
>PLN02780 ketoreductase/ oxidoreductase
Probab=97.95 E-value=0.00012 Score=68.04 Aligned_cols=157 Identities=17% Similarity=0.147 Sum_probs=89.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC--CC-CcceEEeCC-------
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF--PL-LKGVVATTD------- 74 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~--~~-~~~v~~~~~------- 74 (320)
...++||||+|.+|.+++..|+++|. +|+++++++ ++++....++..... .. ...+..+.+
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~G~-------~Vil~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~ 123 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARKGL-------NLVLVARNP--DKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKR 123 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-------CEEEEECCH--HHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHH
Confidence 36899999999999999999999987 799999874 455544445532110 00 001111111
Q ss_pred hhhhcC--CCcEEEEeCCCCCC---C--CCCH---HHHHHhhHHHHHHHHHHH----hhhcCCCeEEEEEcCcchhhHHH
Q 020875 75 AVEACT--GVNIAVMVGGFPRK---E--GMER---KDVMSKNVSIYKAQASAL----EQHAAPNCKVLVVANPANTNALI 140 (320)
Q Consensus 75 ~~~al~--~aDvVi~~ag~~~~---~--~~~r---~~~~~~n~~~~~~i~~~i----~~~~~~~~~viv~snP~~~~~~~ 140 (320)
..+.+. +.|++|+.||.... + ..+. .+.+..|+.....+.+.+ .+.. .+.+|++|+-....
T Consensus 124 l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--~g~IV~iSS~a~~~--- 198 (320)
T PLN02780 124 IKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK--KGAIINIGSGAAIV--- 198 (320)
T ss_pred HHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC--CcEEEEEechhhcc---
Confidence 122333 45699999987431 1 1122 245677877666655554 3332 35677777532110
Q ss_pred HHHHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 141 ~~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
.+..|..-.|+.|+.-...+-..++..+. +..|+.
T Consensus 199 ----~~~~p~~~~Y~aSKaal~~~~~~L~~El~--~~gI~V 233 (320)
T PLN02780 199 ----IPSDPLYAVYAATKAYIDQFSRCLYVEYK--KSGIDV 233 (320)
T ss_pred ----CCCCccchHHHHHHHHHHHHHHHHHHHHh--ccCeEE
Confidence 01122223567776666667777777764 345553
No 264
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.94 E-value=0.00016 Score=67.56 Aligned_cols=150 Identities=16% Similarity=0.130 Sum_probs=84.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCC---CcceEEeCChhhh--
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVEA-- 78 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~---~~~v~~~~~~~~a-- 78 (320)
+.++|+||||+|.+|.+++..|+++|. +|++.++++ ++++....++....... ..++....+..++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-------~Vvl~~R~~--~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~ 76 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-------RLVLAARDE--EALQAVAEECRALGAEVLVVPTDVTDADQVKALAT 76 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHH
Confidence 457899999999999999999999987 899999864 44443333443221110 1122221222222
Q ss_pred -----cCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHH----HHHhhhcCCCeEEEEEcCcchhhHHHHHH
Q 020875 79 -----CTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQA----SALEQHAAPNCKVLVVANPANTNALILKE 143 (320)
Q Consensus 79 -----l~~aDvVi~~ag~~~~~~---~~---r~~~~~~n~~~~~~i~----~~i~~~~~~~~~viv~snP~~~~~~~~~~ 143 (320)
+...|++|+.||...... .+ ..+.+..|+.....+. +.+++.. ...+|++++....
T Consensus 77 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~--~g~iV~isS~~~~------- 147 (330)
T PRK06139 77 QAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG--HGIFINMISLGGF------- 147 (330)
T ss_pred HHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC--CCEEEEEcChhhc-------
Confidence 246899999998743211 11 2335667766554444 4444432 3566666643211
Q ss_pred HCCCCCCCcEEEeehhhHHHHHHHHHHHcC
Q 020875 144 FAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (320)
Q Consensus 144 ~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~ 173 (320)
.+.|..-.|+.++.-...+-..++..+.
T Consensus 148 --~~~p~~~~Y~asKaal~~~~~sL~~El~ 175 (330)
T PRK06139 148 --AAQPYAAAYSASKFGLRGFSEALRGELA 175 (330)
T ss_pred --CCCCCchhHHHHHHHHHHHHHHHHHHhC
Confidence 1223222456665554555566666654
No 265
>KOG2304 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]
Probab=97.93 E-value=9.5e-06 Score=70.03 Aligned_cols=111 Identities=20% Similarity=0.308 Sum_probs=78.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchh----HHHHHHHhcccC------C---------C
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEAL----NGVKMELVDAAF------P---------L 65 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~----~~~~~dl~~~~~------~---------~ 65 (320)
...|+|+| +|.+|+-++...+..|+ .|.|+|.+++ .+ ++....+.+.+. + .
T Consensus 11 ~~~V~ivG-aG~MGSGIAQv~a~sg~-------~V~l~d~~~~--aL~~A~~~I~~sl~rvakKk~~~~~~~~~e~v~~~ 80 (298)
T KOG2304|consen 11 IKNVAIVG-AGQMGSGIAQVAATSGL-------NVWLVDANED--ALSRATKAISSSLKRVAKKKKADDPVALEEFVDDT 80 (298)
T ss_pred ccceEEEc-ccccchhHHHHHHhcCC-------ceEEecCCHH--HHHHHHHHHHHHHHHHHhhcccCChhhHHHHHHHH
Confidence 46899999 59999999999999998 8999999752 22 122222222111 1 1
Q ss_pred CcceEEeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchh-hHHHH
Q 020875 66 LKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT-NALIL 141 (320)
Q Consensus 66 ~~~v~~~~~~~~al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~-~~~~~ 141 (320)
...+..+++...++.|+|+||-+ ..+|+++-+++.+.+.+.|++++ |..||...+ ++.+.
T Consensus 81 l~ri~~~tnv~~~v~dadliiEA--------------ivEn~diK~~lF~~l~~~ak~~~--il~tNTSSl~lt~ia 141 (298)
T KOG2304|consen 81 LDRIKTSTNVSDAVSDADLIIEA--------------IVENLDIKRKLFKDLDKIAKSST--ILATNTSSLSLTDIA 141 (298)
T ss_pred HHHHHHcCCHHHhhhhhHHHHHH--------------HHHhHHHHHHHHHHHHhhcccce--EEeecccceeHHHHH
Confidence 23456677888888899987753 46789999999999999996554 677887654 44443
No 266
>PRK07577 short chain dehydrogenase; Provisional
Probab=97.93 E-value=4.4e-05 Score=67.05 Aligned_cols=108 Identities=19% Similarity=0.164 Sum_probs=62.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchh-HHHHHHHhcccCCCCcceEEeCChhhhcC---
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEAL-NGVKMELVDAAFPLLKGVVATTDAVEACT--- 80 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~-~~~~~dl~~~~~~~~~~v~~~~~~~~al~--- 80 (320)
.++|+|+||+|.+|.+++..|++.|+ +|++++++...... +....|+.+. .+..++++
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~-------~v~~~~r~~~~~~~~~~~~~D~~~~-----------~~~~~~~~~~~ 64 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGH-------QVIGIARSAIDDFPGELFACDLADI-----------EQTAATLAQIN 64 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC-------EEEEEeCCcccccCceEEEeeCCCH-----------HHHHHHHHHHH
Confidence 35899999999999999999999886 78999886421100 0001111111 11122222
Q ss_pred ---CCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHH----HHHHhhhcCCCeEEEEEcC
Q 020875 81 ---GVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQ----ASALEQHAAPNCKVLVVAN 132 (320)
Q Consensus 81 ---~aDvVi~~ag~~~~~~---~~---r~~~~~~n~~~~~~i----~~~i~~~~~~~~~viv~sn 132 (320)
+.|+||+++|...... .+ ....+..|+.....+ .+.+++.. ..+++++|.
T Consensus 65 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~iv~~sS 127 (234)
T PRK07577 65 EIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE--QGRIVNICS 127 (234)
T ss_pred HhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CcEEEEEcc
Confidence 6899999998743211 11 123455565554444 44444443 346777764
No 267
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=97.92 E-value=7.1e-05 Score=69.94 Aligned_cols=171 Identities=16% Similarity=0.103 Sum_probs=93.1
Q ss_pred EEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchh-HHHHHHHhcccC-------C----CCcceEEe--
Q 020875 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEAL-NGVKMELVDAAF-------P----LLKGVVAT-- 72 (320)
Q Consensus 7 kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~-~~~~~dl~~~~~-------~----~~~~v~~~-- 72 (320)
+|+||||+|++|++++..|+.+|.. .+|+++.++.+.+.. +.....+..... . ...++...
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~-----~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 75 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQ-----AKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRL 75 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCC-----CEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccC
Confidence 5899999999999999999988741 168888876432111 000011110000 0 01111110
Q ss_pred ----CChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHH----HHHH
Q 020875 73 ----TDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI----LKEF 144 (320)
Q Consensus 73 ----~~~~~al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~----~~~~ 144 (320)
....+..+++|+|||+|+... ...+..++...|+....++++.+.+.. .. .++++|.- .+.... ..+.
T Consensus 76 gl~~~~~~~~~~~~d~vih~a~~~~-~~~~~~~~~~~nv~g~~~ll~~a~~~~-~~-~~v~iSS~-~v~~~~~~~~~~~~ 151 (367)
T TIGR01746 76 GLSDAEWERLAENVDTIVHNGALVN-WVYPYSELRAANVLGTREVLRLAASGR-AK-PLHYVSTI-SVLAAIDLSTVTED 151 (367)
T ss_pred CcCHHHHHHHHhhCCEEEeCCcEec-cCCcHHHHhhhhhHHHHHHHHHHhhCC-Cc-eEEEEccc-cccCCcCCCCcccc
Confidence 123344578999999998643 123445667899999999999988764 32 35555532 111100 0000
Q ss_pred CC---CC-CCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeeeEEEcC
Q 020875 145 AP---SI-PAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGN 187 (320)
Q Consensus 145 ~~---~~-~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~ 187 (320)
.. .. +....++.++....++....++. |++..-++...|.|.
T Consensus 152 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg~v~G~ 197 (367)
T TIGR01746 152 DAIVTPPPGLAGGYAQSKWVAELLVREASDR-GLPVTIVRPGRILGN 197 (367)
T ss_pred ccccccccccCCChHHHHHHHHHHHHHHHhc-CCCEEEECCCceeec
Confidence 00 00 00113555666555555544443 777777776667774
No 268
>PRK09186 flagellin modification protein A; Provisional
Probab=97.92 E-value=0.00012 Score=65.23 Aligned_cols=162 Identities=17% Similarity=0.117 Sum_probs=85.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcc-cCC----CCcceEEeCChhhhc
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-AFP----LLKGVVATTDAVEAC 79 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~-~~~----~~~~v~~~~~~~~al 79 (320)
.++|+|+||+|.+|.+++..|++.|+ +|++.++++ ++++....++... ... ...++....+..+++
T Consensus 4 ~k~vlItGas~giG~~~a~~l~~~g~-------~v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~ 74 (256)
T PRK09186 4 GKTILITGAGGLIGSALVKAILEAGG-------IVIAADIDK--EALNELLESLGKEFKSKKLSLVELDITDQESLEEFL 74 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEecCh--HHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHH
Confidence 46899999999999999999999887 788888763 3333333333211 000 012332222333333
Q ss_pred C-------CCcEEEEeCCCCCC----C--CCC---HHHHHHhhHH----HHHHHHHHHhhhcCCCeEEEEEcCcchhhHH
Q 020875 80 T-------GVNIAVMVGGFPRK----E--GME---RKDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNAL 139 (320)
Q Consensus 80 ~-------~aDvVi~~ag~~~~----~--~~~---r~~~~~~n~~----~~~~i~~~i~~~~~~~~~viv~snP~~~~~~ 139 (320)
+ ..|+||+.|+.... + ..+ ....+..|+. .++.+.+.+++.. ..++|++|.-......
T Consensus 75 ~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~~~~ 152 (256)
T PRK09186 75 SKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG--GGNLVNISSIYGVVAP 152 (256)
T ss_pred HHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC--CceEEEEechhhhccc
Confidence 3 37999999864321 1 112 1223445554 4445555555443 3467776642211110
Q ss_pred HHHHHCCCCCCC--cEEEeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 140 ILKEFAPSIPAK--NITCLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 140 ~~~~~~~~~~~~--~i~~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
.... ..+.+.. ..|+.++.....+.+.+++.+. +..++
T Consensus 153 ~~~~-~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~--~~~i~ 192 (256)
T PRK09186 153 KFEI-YEGTSMTSPVEYAAIKAGIIHLTKYLAKYFK--DSNIR 192 (256)
T ss_pred cchh-ccccccCCcchhHHHHHHHHHHHHHHHHHhC--cCCeE
Confidence 0000 0111111 1366666666666666777653 44555
No 269
>PRK08589 short chain dehydrogenase; Validated
Probab=97.92 E-value=8.2e-05 Score=67.31 Aligned_cols=157 Identities=11% Similarity=0.048 Sum_probs=85.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhh----
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE---- 77 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~---- 77 (320)
.++++||||+|.+|.+++..|++.|. +|++++++ +.+.....++.+.... ...++....+..+
T Consensus 6 ~k~vlItGas~gIG~aia~~l~~~G~-------~vi~~~r~---~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 75 (272)
T PRK08589 6 NKVAVITGASTGIGQASAIALAQEGA-------YVLAVDIA---EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASE 75 (272)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCc---HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHH
Confidence 46899999999999999999999886 89999986 2333333334322111 1112221111222
Q ss_pred ---hcCCCcEEEEeCCCCCCCC----CCH---HHHHHhhHHHHHHHHHHHhhhc-CCCeEEEEEcCcchhhHHHHHHHCC
Q 020875 78 ---ACTGVNIAVMVGGFPRKEG----MER---KDVMSKNVSIYKAQASALEQHA-APNCKVLVVANPANTNALILKEFAP 146 (320)
Q Consensus 78 ---al~~aDvVi~~ag~~~~~~----~~r---~~~~~~n~~~~~~i~~~i~~~~-~~~~~viv~snP~~~~~~~~~~~~~ 146 (320)
.+...|++|+.||.....+ .+. ...+..|+.....+.+.+..+- ..++++|++|+.... .
T Consensus 76 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~---------~ 146 (272)
T PRK08589 76 IKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQ---------A 146 (272)
T ss_pred HHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhc---------C
Confidence 2335799999998753211 122 2344566654444433333221 012567777754321 1
Q ss_pred CCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeee
Q 020875 147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182 (320)
Q Consensus 147 ~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~ 182 (320)
+.+..-.|+.++.-...+.+.+|+.++ +..|+..
T Consensus 147 ~~~~~~~Y~asKaal~~l~~~la~e~~--~~gI~v~ 180 (272)
T PRK08589 147 ADLYRSGYNAAKGAVINFTKSIAIEYG--RDGIRAN 180 (272)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHhh--hcCeEEE
Confidence 122222456666555667777787764 4456643
No 270
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.92 E-value=8.1e-05 Score=67.28 Aligned_cols=115 Identities=17% Similarity=0.158 Sum_probs=64.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC-CCCcceEEeCChhh-------
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVE------- 77 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~~~~~~------- 77 (320)
++++||||+|++|.+++..|++.|+ +|++.++++ +.+.. +..... ....++....+..+
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-------~V~~~~r~~--~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 68 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-------EVWATARKA--EDVEA----LAAAGFTAVQLDVNDGAALARLAEELEA 68 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHH----HHHCCCeEEEeeCCCHHHHHHHHHHHHH
Confidence 4899999999999999999999887 889998863 22221 111110 00011111111111
Q ss_pred hcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHhhhcC-CCeEEEEEcCc
Q 020875 78 ACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHAA-PNCKVLVVANP 133 (320)
Q Consensus 78 al~~aDvVi~~ag~~~~~---~~~---r~~~~~~n~~~~~~i~~~i~~~~~-~~~~viv~snP 133 (320)
...+.|+||+.||..... ..+ ....+..|+.....+.+.+..... ....++++++-
T Consensus 69 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~ 131 (274)
T PRK05693 69 EHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSV 131 (274)
T ss_pred hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCc
Confidence 224789999999864311 112 233566777766555555433210 12456666653
No 271
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=97.91 E-value=5e-05 Score=67.04 Aligned_cols=101 Identities=20% Similarity=0.194 Sum_probs=63.7
Q ss_pred EEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC-CCcceEEeCChhhhcCCCcEEE
Q 020875 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVATTDAVEACTGVNIAV 86 (320)
Q Consensus 8 I~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~-~~~~v~~~~~~~~al~~aDvVi 86 (320)
|+|+||+|.+|++++..|+..++ +|.++-++.+.+.+ ..+.+.... ...++....++.++|+|+|.||
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~-------~V~~l~R~~~~~~~----~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~ 69 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF-------SVRALVRDPSSDRA----QQLQALGAEVVEADYDDPESLVAALKGVDAVF 69 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG-------CEEEEESSSHHHHH----HHHHHTTTEEEES-TT-HHHHHHHHTTCSEEE
T ss_pred CEEECCccHHHHHHHHHHHhCCC-------CcEEEEeccchhhh----hhhhcccceEeecccCCHHHHHHHHcCCceEE
Confidence 78999999999999999999776 68877776422211 122222111 1122223346788999999999
Q ss_pred EeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcC
Q 020875 87 MVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN 132 (320)
Q Consensus 87 ~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~sn 132 (320)
++.+... ..+ .+...++++++++.+ ++.++.|.
T Consensus 70 ~~~~~~~---~~~-------~~~~~~li~Aa~~ag---Vk~~v~ss 102 (233)
T PF05368_consen 70 SVTPPSH---PSE-------LEQQKNLIDAAKAAG---VKHFVPSS 102 (233)
T ss_dssp EESSCSC---CCH-------HHHHHHHHHHHHHHT----SEEEESE
T ss_pred eecCcch---hhh-------hhhhhhHHHhhhccc---cceEEEEE
Confidence 9876432 111 245577888888875 55556653
No 272
>PRK06523 short chain dehydrogenase; Provisional
Probab=97.91 E-value=4.6e-05 Score=68.20 Aligned_cols=153 Identities=17% Similarity=0.165 Sum_probs=84.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccch---hHHHHHHHhcccCCCCcceE-EeCChhhhcC
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEA---LNGVKMELVDAAFPLLKGVV-ATTDAVEACT 80 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~---~~~~~~dl~~~~~~~~~~v~-~~~~~~~al~ 80 (320)
.++|+|+||+|.+|++++..|++.|. +|+++++++.... +.....|+.+.. .+. ......+.+.
T Consensus 9 ~k~vlItGas~gIG~~ia~~l~~~G~-------~v~~~~r~~~~~~~~~~~~~~~D~~~~~-----~~~~~~~~~~~~~~ 76 (260)
T PRK06523 9 GKRALVTGGTKGIGAATVARLLEAGA-------RVVTTARSRPDDLPEGVEFVAADLTTAE-----GCAAVARAVLERLG 76 (260)
T ss_pred CCEEEEECCCCchhHHHHHHHHHCCC-------EEEEEeCChhhhcCCceeEEecCCCCHH-----HHHHHHHHHHHHcC
Confidence 37899999999999999999999887 7999998642110 000111222111 000 0001223345
Q ss_pred CCcEEEEeCCCCCCC-----CCC---HHHHHHhhHHHHHHH----HHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCC
Q 020875 81 GVNIAVMVGGFPRKE-----GME---RKDVMSKNVSIYKAQ----ASALEQHAAPNCKVLVVANPANTNALILKEFAPSI 148 (320)
Q Consensus 81 ~aDvVi~~ag~~~~~-----~~~---r~~~~~~n~~~~~~i----~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~ 148 (320)
..|+||+.||..... ..+ ..+.+..|+.....+ .+.+++.. ..++|++|+.... ...
T Consensus 77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~ii~isS~~~~---------~~~ 145 (260)
T PRK06523 77 GVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG--SGVIIHVTSIQRR---------LPL 145 (260)
T ss_pred CCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC--CcEEEEEeccccc---------CCC
Confidence 789999999864211 011 234556776655444 45555443 2567777764321 112
Q ss_pred C-CCcEEEeehhhHHHHHHHHHHHcCCCCCCeeee
Q 020875 149 P-AKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182 (320)
Q Consensus 149 ~-~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~ 182 (320)
+ ....|+.++.-...+-..+++.++ +..|+..
T Consensus 146 ~~~~~~Y~~sK~a~~~l~~~~a~~~~--~~gi~v~ 178 (260)
T PRK06523 146 PESTTAYAAAKAALSTYSKSLSKEVA--PKGVRVN 178 (260)
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHHh--hcCcEEE
Confidence 2 222466666655566666776654 3456543
No 273
>PRK06123 short chain dehydrogenase; Provisional
Probab=97.91 E-value=0.00015 Score=64.29 Aligned_cols=156 Identities=13% Similarity=0.099 Sum_probs=86.5
Q ss_pred EEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhhc----
Q 020875 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEAC---- 79 (320)
Q Consensus 7 kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~al---- 79 (320)
.++|+||+|++|++++..|++.|. .+++.+++. .+++.....++...... ...++....+..+++
T Consensus 4 ~~lVtG~~~~iG~~~a~~l~~~G~-------~vv~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 75 (248)
T PRK06123 4 VMIITGASRGIGAATALLAAERGY-------AVCLNYLRN-RDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVD 75 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-------eEEEecCCC-HHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHH
Confidence 699999999999999999999886 677766432 22333222223221110 111222222233333
Q ss_pred ---CCCcEEEEeCCCCCCC----CCC---HHHHHHhhHHHHHHHHHHHhhhc-----CCCeEEEEEcCcchhhHHHHHHH
Q 020875 80 ---TGVNIAVMVGGFPRKE----GME---RKDVMSKNVSIYKAQASALEQHA-----APNCKVLVVANPANTNALILKEF 144 (320)
Q Consensus 80 ---~~aDvVi~~ag~~~~~----~~~---r~~~~~~n~~~~~~i~~~i~~~~-----~~~~~viv~snP~~~~~~~~~~~ 144 (320)
...|+|||++|..... ..+ ..+.+..|+.....+.+.+.+.- ..++.++++|+....
T Consensus 76 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~-------- 147 (248)
T PRK06123 76 RELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAAR-------- 147 (248)
T ss_pred HHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhc--------
Confidence 3679999999875321 112 22457788877666655554431 113567777764321
Q ss_pred CCCCCCC-cEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 145 APSIPAK-NITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 145 ~~~~~~~-~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
.+.+.. -.|+.++.....+...+++.+. +..++.
T Consensus 148 -~~~~~~~~~Y~~sKaa~~~~~~~la~~~~--~~~i~v 182 (248)
T PRK06123 148 -LGSPGEYIDYAASKGAIDTMTIGLAKEVA--AEGIRV 182 (248)
T ss_pred -CCCCCCccchHHHHHHHHHHHHHHHHHhc--ccCeEE
Confidence 112221 1367776666677777887763 344553
No 274
>PRK08703 short chain dehydrogenase; Provisional
Probab=97.90 E-value=0.00094 Score=58.90 Aligned_cols=152 Identities=15% Similarity=0.103 Sum_probs=83.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC----CCcceEEe--CChh--
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP----LLKGVVAT--TDAV-- 76 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~----~~~~v~~~--~~~~-- 76 (320)
.+++.|+||+|++|.+++..|+++|. +|+++++++ ++++....++.....+ ...++... .+..
T Consensus 6 ~k~vlItG~sggiG~~la~~l~~~g~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~ 76 (239)
T PRK08703 6 DKTILVTGASQGLGEQVAKAYAAAGA-------TVILVARHQ--KKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQF 76 (239)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcCC-------EEEEEeCCh--HHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHH
Confidence 46899999999999999999999886 799999874 3333333333211100 01122111 1111
Q ss_pred -----hhc-CCCcEEEEeCCCCCC--C--CCCH---HHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEEcCcchhhHHHH
Q 020875 77 -----EAC-TGVNIAVMVGGFPRK--E--GMER---KDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALIL 141 (320)
Q Consensus 77 -----~al-~~aDvVi~~ag~~~~--~--~~~r---~~~~~~n~~~~~~i~~~i~~~~--~~~~~viv~snP~~~~~~~~ 141 (320)
+.+ ...|+||++||.... + ..+. .+.+..|+.....+.+.+.+.- ...+.++++++....
T Consensus 77 ~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~----- 151 (239)
T PRK08703 77 AATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGE----- 151 (239)
T ss_pred HHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccc-----
Confidence 112 467999999986421 1 1122 2345677766555544443321 023566666643211
Q ss_pred HHHCCCCCCCcEEEeehhhHHHHHHHHHHHcCC
Q 020875 142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNV 174 (320)
Q Consensus 142 ~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v 174 (320)
.+.+..--|+.++.-...+-+.+++.++-
T Consensus 152 ----~~~~~~~~Y~~sKaa~~~~~~~la~e~~~ 180 (239)
T PRK08703 152 ----TPKAYWGGFGASKAALNYLCKVAADEWER 180 (239)
T ss_pred ----cCCCCccchHHhHHHHHHHHHHHHHHhcc
Confidence 11221124666666556666667777653
No 275
>PRK08177 short chain dehydrogenase; Provisional
Probab=97.90 E-value=5e-05 Score=66.54 Aligned_cols=156 Identities=10% Similarity=0.054 Sum_probs=82.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCCh---hhhc--C
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDA---VEAC--T 80 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~---~~al--~ 80 (320)
+++.|+||+|++|++++..|++.|. +|+++++++. .... ..++.+.. ....++....+. .+.+ .
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-------~V~~~~r~~~--~~~~-~~~~~~~~-~~~~D~~d~~~~~~~~~~~~~~ 70 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-------QVTATVRGPQ--QDTA-LQALPGVH-IEKLDMNDPASLDQLLQRLQGQ 70 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-------EEEEEeCCCc--chHH-HHhccccc-eEEcCCCCHHHHHHHHHHhhcC
Confidence 5799999999999999999999886 8999998752 2211 11111110 011122111111 2222 2
Q ss_pred CCcEEEEeCCCCCCC-----CCCHH---HHHHhhHHHHHHHHHHHhhhcCCC-eEEEEEcCcchhhHHHHHHHCCCCCCC
Q 020875 81 GVNIAVMVGGFPRKE-----GMERK---DVMSKNVSIYKAQASALEQHAAPN-CKVLVVANPANTNALILKEFAPSIPAK 151 (320)
Q Consensus 81 ~aDvVi~~ag~~~~~-----~~~r~---~~~~~n~~~~~~i~~~i~~~~~~~-~~viv~snP~~~~~~~~~~~~~~~~~~ 151 (320)
..|+||+.+|..... ..+.. ..+..|+.....+.+.+.++...+ ..+++.+...... .. +.....
T Consensus 71 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~----~~--~~~~~~ 144 (225)
T PRK08177 71 RFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSV----EL--PDGGEM 144 (225)
T ss_pred CCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCcccc----cc--CCCCCc
Confidence 589999999874211 11222 234456555555555554432112 3445454322111 00 000111
Q ss_pred cEEEeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 152 NITCLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 152 ~i~~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
..|+.++.....+.+.+++.++- ..++
T Consensus 145 ~~Y~~sK~a~~~~~~~l~~e~~~--~~i~ 171 (225)
T PRK08177 145 PLYKASKAALNSMTRSFVAELGE--PTLT 171 (225)
T ss_pred cchHHHHHHHHHHHHHHHHHhhc--CCeE
Confidence 24677777777777778877653 4555
No 276
>PLN02503 fatty acyl-CoA reductase 2
Probab=97.90 E-value=7.8e-05 Score=74.72 Aligned_cols=112 Identities=18% Similarity=0.073 Sum_probs=67.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHH-HHHhc-----------ccC---------
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVK-MELVD-----------AAF--------- 63 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~-~dl~~-----------~~~--------- 63 (320)
.++|.||||+||+|.+++..|+..+.- ..+|.++.+..+.+.+.... .++.+ ...
T Consensus 119 ~k~VlVTGaTGFLGk~LlekLLr~~~~----v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki 194 (605)
T PLN02503 119 GKNFLITGATGFLAKVLIEKILRTNPD----VGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKL 194 (605)
T ss_pred CCEEEEcCCchHHHHHHHHHHHHhCCC----CcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccE
Confidence 479999999999999999999875421 12677776643221111110 11111 000
Q ss_pred -CCCcceEEe-----C-ChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhc
Q 020875 64 -PLLKGVVAT-----T-DAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHA 121 (320)
Q Consensus 64 -~~~~~v~~~-----~-~~~~al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~ 121 (320)
+...++... . +.....+++|+|||+|+... ...+..+....|+..+.++++.+.+..
T Consensus 195 ~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~-f~~~~~~a~~vNV~GT~nLLelA~~~~ 258 (605)
T PLN02503 195 VPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTT-FDERYDVAIDINTRGPCHLMSFAKKCK 258 (605)
T ss_pred EEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccc-cccCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 011222211 0 12223467999999998653 234566778899999999999998763
No 277
>PRK06484 short chain dehydrogenase; Validated
Probab=97.90 E-value=9.1e-05 Score=73.30 Aligned_cols=158 Identities=17% Similarity=0.161 Sum_probs=93.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhh------
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA------ 78 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a------ 78 (320)
.++++||||+|.+|.+++..|++.|. .|++.++++ ++++.....+.........++....+..+.
T Consensus 269 ~k~~lItGas~gIG~~~a~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 339 (520)
T PRK06484 269 PRVVAITGGARGIGRAVADRFAAAGD-------RLLIIDRDA--EGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQA 339 (520)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHH
Confidence 36899999999999999999999986 799999864 333322222211000011122211122222
Q ss_pred -cCCCcEEEEeCCCCCC--C--CCC---HHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCC
Q 020875 79 -CTGVNIAVMVGGFPRK--E--GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPA 150 (320)
Q Consensus 79 -l~~aDvVi~~ag~~~~--~--~~~---r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~ 150 (320)
+...|++|+.||.... + ..+ ....+..|+.....+.+.+..+-.....+|++|+.... .+.|.
T Consensus 340 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~---------~~~~~ 410 (520)
T PRK06484 340 RWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASL---------LALPP 410 (520)
T ss_pred HcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhc---------CCCCC
Confidence 3457999999997421 1 122 33467788887777777665543234677888764321 12333
Q ss_pred CcEEEeehhhHHHHHHHHHHHcCCCCCCeeee
Q 020875 151 KNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182 (320)
Q Consensus 151 ~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~ 182 (320)
.-.|+.++.-...+-+.+++.+. +..|+..
T Consensus 411 ~~~Y~asKaal~~l~~~la~e~~--~~gI~vn 440 (520)
T PRK06484 411 RNAYCASKAAVTMLSRSLACEWA--PAGIRVN 440 (520)
T ss_pred CchhHHHHHHHHHHHHHHHHHhh--hhCeEEE
Confidence 33567777666677777777764 3456533
No 278
>PRK07832 short chain dehydrogenase; Provisional
Probab=97.90 E-value=0.0005 Score=62.04 Aligned_cols=156 Identities=13% Similarity=0.090 Sum_probs=86.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCC----CcceEEeCC-------
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL----LKGVVATTD------- 74 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~----~~~v~~~~~------- 74 (320)
++++||||+|.+|.+++..|++.|. .|+++++++ +.++....++....... ..++....+
T Consensus 1 k~vlItGas~giG~~la~~la~~G~-------~vv~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 71 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGA-------ELFLTDRDA--DGLAQTVADARALGGTVPEHRALDISDYDAVAAFAAD 71 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHH
Confidence 4799999999999999999999886 788998864 33333333332211100 011111111
Q ss_pred hhhhcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHhhhc---CCCeEEEEEcCcchhhHHHHHHHC
Q 020875 75 AVEACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHA---APNCKVLVVANPANTNALILKEFA 145 (320)
Q Consensus 75 ~~~al~~aDvVi~~ag~~~~~---~~~---r~~~~~~n~~~~~~i~~~i~~~~---~~~~~viv~snP~~~~~~~~~~~~ 145 (320)
..+.+...|+||+.+|..... ..+ -...+..|+.....+.+.+..+- .....+|++|.....
T Consensus 72 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~--------- 142 (272)
T PRK07832 72 IHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGL--------- 142 (272)
T ss_pred HHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEcccccc---------
Confidence 112245689999999864311 112 23456778777777776654321 123567777754321
Q ss_pred CCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 146 PSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 146 ~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
.+.|..-.++.++.....+...++..+. +.+|+.
T Consensus 143 ~~~~~~~~Y~~sK~a~~~~~~~l~~e~~--~~~i~v 176 (272)
T PRK07832 143 VALPWHAAYSASKFGLRGLSEVLRFDLA--RHGIGV 176 (272)
T ss_pred CCCCCCcchHHHHHHHHHHHHHHHHHhh--hcCcEE
Confidence 1222222456665544456666665543 344553
No 279
>PLN00016 RNA-binding protein; Provisional
Probab=97.90 E-value=2.7e-05 Score=74.00 Aligned_cols=150 Identities=16% Similarity=0.211 Sum_probs=81.2
Q ss_pred CCCCEEEEE----cCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCcc-chhHHH----HHHHhcccCCCCcceEE-e
Q 020875 3 KEPVRVLVT----GAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA-EALNGV----KMELVDAAFPLLKGVVA-T 72 (320)
Q Consensus 3 ~~~~kI~Ii----GA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~-~~~~~~----~~dl~~~~~~~~~~v~~-~ 72 (320)
..++||+|| ||+||+|++++..|+++|+ +|++++++... ..+... ..++.... ..-+.. .
T Consensus 50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~-------~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~---v~~v~~D~ 119 (378)
T PLN00016 50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGH-------EVTLFTRGKEPSQKMKKEPFSRFSELSSAG---VKTVWGDP 119 (378)
T ss_pred cccceEEEEeccCCCceeEhHHHHHHHHHCCC-------EEEEEecCCcchhhhccCchhhhhHhhhcC---ceEEEecH
Confidence 345799999 9999999999999999987 89999886421 000000 00111110 000111 0
Q ss_pred CChhhhc--CCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCC-
Q 020875 73 TDAVEAC--TGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIP- 149 (320)
Q Consensus 73 ~~~~~al--~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~- 149 (320)
.++.+.+ .++|+||++++. +...++.+++++++.+ .. ++|.+|.. .+. - . ....|
T Consensus 120 ~d~~~~~~~~~~d~Vi~~~~~--------------~~~~~~~ll~aa~~~g-vk-r~V~~SS~-~vy--g--~-~~~~p~ 177 (378)
T PLN00016 120 ADVKSKVAGAGFDVVYDNNGK--------------DLDEVEPVADWAKSPG-LK-QFLFCSSA-GVY--K--K-SDEPPH 177 (378)
T ss_pred HHHHhhhccCCccEEEeCCCC--------------CHHHHHHHHHHHHHcC-CC-EEEEEccH-hhc--C--C-CCCCCC
Confidence 1223333 579999998652 1234667788887764 22 56666642 211 0 0 00001
Q ss_pred -CC---cEEEeehhhHHHHHHHHHHHcCCCCCCeeeeEEEcCCC
Q 020875 150 -AK---NITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS 189 (320)
Q Consensus 150 -~~---~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~hg 189 (320)
.. +... ++....+ +.+..+++..-++...++|...
T Consensus 178 ~E~~~~~p~~-sK~~~E~----~l~~~~l~~~ilRp~~vyG~~~ 216 (378)
T PLN00016 178 VEGDAVKPKA-GHLEVEA----YLQKLGVNWTSFRPQYIYGPGN 216 (378)
T ss_pred CCCCcCCCcc-hHHHHHH----HHHHcCCCeEEEeceeEECCCC
Confidence 00 0111 3333332 2245688888888888899754
No 280
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=97.89 E-value=1.1e-05 Score=72.32 Aligned_cols=167 Identities=15% Similarity=0.086 Sum_probs=83.3
Q ss_pred EEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHH-HHHhcccC--C----CCcceEEe-C--------
Q 020875 10 VTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVK-MELVDAAF--P----LLKGVVAT-T-------- 73 (320)
Q Consensus 10 IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~-~dl~~~~~--~----~~~~v~~~-~-------- 73 (320)
||||+||+|++++..|+..+.. .+|+++-+..+.+.+.... ..+.+... . ...+++.- .
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~-----~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lG 75 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPD-----VKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLG 75 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-T-----TEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG
T ss_pred CcCCCcHHHHHHHHHHHcCCCC-----cEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccC
Confidence 7999999999999999987641 1677777754321111111 11111000 0 01122211 1
Q ss_pred ---Chhhhc-CCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHH---------
Q 020875 74 ---DAVEAC-TGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI--------- 140 (320)
Q Consensus 74 ---~~~~al-~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~--------- 140 (320)
+.++.+ +.+|+|||+|+.-. ...+..++...|+..++++++.+.+.. . .+++.+|. .-+....
T Consensus 76 L~~~~~~~L~~~v~~IiH~Aa~v~-~~~~~~~~~~~NV~gt~~ll~la~~~~-~-~~~~~iST-a~v~~~~~~~~~~~~~ 151 (249)
T PF07993_consen 76 LSDEDYQELAEEVDVIIHCAASVN-FNAPYSELRAVNVDGTRNLLRLAAQGK-R-KRFHYIST-AYVAGSRPGTIEEKVY 151 (249)
T ss_dssp --HHHHHHHHHH--EEEE--SS-S-BS-S--EEHHHHHHHHHHHHHHHTSSS-----EEEEEE-GGGTTS-TTT--SSS-
T ss_pred CChHHhhccccccceeeecchhhh-hcccchhhhhhHHHHHHHHHHHHHhcc-C-cceEEecc-ccccCCCCCccccccc
Confidence 122333 68999999987542 122444577899999999999999653 2 36777775 2111110
Q ss_pred -HHHHCCCCCCC---cEEEeehhhHHHHHHHHHHHcCCCCCCeeeeEEEc
Q 020875 141 -LKEFAPSIPAK---NITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG 186 (320)
Q Consensus 141 -~~~~~~~~~~~---~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G 186 (320)
.... ...+.. .-|.-|+..++++....++..|++..-+|-..|.|
T Consensus 152 ~~~~~-~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g 200 (249)
T PF07993_consen 152 PEEED-DLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVG 200 (249)
T ss_dssp HHH---EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-
T ss_pred ccccc-cchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccc
Confidence 0000 000111 13566888888988888888899988888777666
No 281
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.88 E-value=0.00032 Score=62.17 Aligned_cols=156 Identities=12% Similarity=0.047 Sum_probs=83.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEE-EecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhhc-
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHM-LDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEAC- 79 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l-~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~al- 79 (320)
.++++|+||+|++|.+++..|++.|. ++++ .+++. ++++....++...... ...++....+..+++
T Consensus 4 ~~~vlItGa~g~iG~~~a~~l~~~g~-------~v~~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 74 (250)
T PRK08063 4 GKVALVTGSSRGIGKAIALRLAEEGY-------DIAVNYARSR--KAAEETAEEIEALGRKALAVKANVGDVEKIKEMFA 74 (250)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEcCCCH--HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence 35899999999999999999999886 6655 45442 3333222233221110 112222222222222
Q ss_pred ------CCCcEEEEeCCCCCC-C--CCCHH---HHHHhhHHHHHHHHHHHhhhcC--CCeEEEEEcCcchhhHHHHHHHC
Q 020875 80 ------TGVNIAVMVGGFPRK-E--GMERK---DVMSKNVSIYKAQASALEQHAA--PNCKVLVVANPANTNALILKEFA 145 (320)
Q Consensus 80 ------~~aDvVi~~ag~~~~-~--~~~r~---~~~~~n~~~~~~i~~~i~~~~~--~~~~viv~snP~~~~~~~~~~~~ 145 (320)
...|+||+.+|.... + ..+.. ..+..|......+++.+.++.. +..++|++|+....
T Consensus 75 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~--------- 145 (250)
T PRK08063 75 QIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSI--------- 145 (250)
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhc---------
Confidence 358999999986321 1 11222 2355777666666666655321 23466766652210
Q ss_pred CCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 146 PSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 146 ~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
...+..-.++.++.....+-..+++.+. +..++
T Consensus 146 ~~~~~~~~y~~sK~a~~~~~~~~~~~~~--~~~i~ 178 (250)
T PRK08063 146 RYLENYTTVGVSKAALEALTRYLAVELA--PKGIA 178 (250)
T ss_pred cCCCCccHHHHHHHHHHHHHHHHHHHHh--HhCeE
Confidence 1222222456666666666666666543 34555
No 282
>PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.88 E-value=0.0002 Score=67.21 Aligned_cols=115 Identities=20% Similarity=0.210 Sum_probs=71.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcc-----cCCCCcceEEeCChhh
Q 020875 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-----AFPLLKGVVATTDAVE 77 (320)
Q Consensus 3 ~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~-----~~~~~~~v~~~~~~~~ 77 (320)
+++|||+|+| +|.+|+.++..|.+.+. ++++.+++ +..+....+-... ......++..+++..+
T Consensus 5 ~~~mkI~IiG-aGa~G~alA~~La~~g~--------v~l~~~~~--~~~~~i~~~~~~~~~l~~~~~l~~~i~~t~d~~~ 73 (341)
T PRK12439 5 KREPKVVVLG-GGSWGTTVASICARRGP--------TLQWVRSA--ETADDINDNHRNSRYLGNDVVLSDTLRATTDFAE 73 (341)
T ss_pred cCCCeEEEEC-CCHHHHHHHHHHHHCCC--------EEEEeCCH--HHHHHHHhcCCCcccCCCCcccCCCeEEECCHHH
Confidence 3578999999 69999999999998763 56666643 2222111110000 0111235677778888
Q ss_pred hcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchh-----hHHHHHHH
Q 020875 78 ACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT-----NALILKEF 144 (320)
Q Consensus 78 al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~-----~~~~~~~~ 144 (320)
+++++|+||++.- ...++++++.+..+-+++..+|.++|-++. +...+.++
T Consensus 74 a~~~aDlVilavp----------------s~~~~~vl~~i~~~l~~~~~vIsl~kGi~~~t~~~~se~i~~~ 129 (341)
T PRK12439 74 AANCADVVVMGVP----------------SHGFRGVLTELAKELRPWVPVVSLVKGLEQGTNMRMSQIIEEV 129 (341)
T ss_pred HHhcCCEEEEEeC----------------HHHHHHHHHHHHhhcCCCCEEEEEEeCCcCCCCCcHHHHHHHH
Confidence 8999999999852 124556666666654455667888886653 34455553
No 283
>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional
Probab=97.88 E-value=0.00033 Score=67.72 Aligned_cols=76 Identities=16% Similarity=0.199 Sum_probs=54.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCC----------CcceEEe
Q 020875 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL----------LKGVVAT 72 (320)
Q Consensus 3 ~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~----------~~~v~~~ 72 (320)
..+|||+|+| .|++|..++..|+. ++ +|+.+|+++ ++++ .+.....+. ...+..+
T Consensus 4 ~~~mkI~vIG-lGyvGlpmA~~la~-~~-------~V~g~D~~~--~~ve----~l~~G~~~~~e~~~~~l~~~g~l~~t 68 (425)
T PRK15182 4 IDEVKIAIIG-LGYVGLPLAVEFGK-SR-------QVVGFDVNK--KRIL----ELKNGVDVNLETTEEELREARYLKFT 68 (425)
T ss_pred CCCCeEEEEC-cCcchHHHHHHHhc-CC-------EEEEEeCCH--HHHH----HHHCcCCCCCCCCHHHHHhhCCeeEE
Confidence 4579999999 89999999998877 45 899999974 3333 333222211 1235566
Q ss_pred CChhhhcCCCcEEEEeCCCCCC
Q 020875 73 TDAVEACTGVNIAVMVGGFPRK 94 (320)
Q Consensus 73 ~~~~~al~~aDvVi~~ag~~~~ 94 (320)
++. +++++||++|++.+.|..
T Consensus 69 ~~~-~~~~~advvii~Vptp~~ 89 (425)
T PRK15182 69 SEI-EKIKECNFYIITVPTPIN 89 (425)
T ss_pred eCH-HHHcCCCEEEEEcCCCCC
Confidence 554 578999999999988753
No 284
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=97.88 E-value=0.00023 Score=63.05 Aligned_cols=157 Identities=16% Similarity=0.086 Sum_probs=82.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhh---
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA--- 78 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~a--- 78 (320)
+++|+|+||+|++|+.++..|++.|. ++++...+. .+.++....++...... ...++....+..++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~-------~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 73 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGW-------SVGINYARD-AAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDA 73 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCC-------EEEEEeCCC-HHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHH
Confidence 35899999999999999999999886 676654321 23333333333221100 01122211122222
Q ss_pred ----cCCCcEEEEeCCCCCC--C--CCCH---HHHHHhhHHHHHHHHHHHhhhcC-----CCeEEEEEcCcchhhHHHHH
Q 020875 79 ----CTGVNIAVMVGGFPRK--E--GMER---KDVMSKNVSIYKAQASALEQHAA-----PNCKVLVVANPANTNALILK 142 (320)
Q Consensus 79 ----l~~aDvVi~~ag~~~~--~--~~~r---~~~~~~n~~~~~~i~~~i~~~~~-----~~~~viv~snP~~~~~~~~~ 142 (320)
+...|++|++||.... + ..+. ...+..|......+++.+.+... +..++|++|+....
T Consensus 74 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~------ 147 (248)
T PRK06947 74 VQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASR------ 147 (248)
T ss_pred HHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhc------
Confidence 3468999999986421 1 1122 23466776665555433322210 13467777754321
Q ss_pred HHCCCCCCC-cEEEeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 143 EFAPSIPAK-NITCLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 143 ~~~~~~~~~-~i~~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
.+.+.. ..|+.++.-...+-..+++.+. +..++
T Consensus 148 ---~~~~~~~~~Y~~sK~~~~~~~~~la~~~~--~~~i~ 181 (248)
T PRK06947 148 ---LGSPNEYVDYAGSKGAVDTLTLGLAKELG--PHGVR 181 (248)
T ss_pred ---CCCCCCCcccHhhHHHHHHHHHHHHHHhh--hhCcE
Confidence 111211 2366666655566666777764 33454
No 285
>PRK05854 short chain dehydrogenase; Provisional
Probab=97.88 E-value=8.4e-05 Score=68.85 Aligned_cols=166 Identities=10% Similarity=-0.003 Sum_probs=91.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC--C---CCcceEEeCChh---
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF--P---LLKGVVATTDAV--- 76 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~--~---~~~~v~~~~~~~--- 76 (320)
.+++.||||+|.||.+++..|+..|. +|++.+++. ++++....++..... . ...++....+..
T Consensus 14 gk~~lITGas~GIG~~~a~~La~~G~-------~Vil~~R~~--~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~ 84 (313)
T PRK05854 14 GKRAVVTGASDGLGLGLARRLAAAGA-------EVILPVRNR--AKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALG 84 (313)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHH
Confidence 46899999999999999999999886 899998864 334333333432110 0 001111111111
Q ss_pred ----hhcCCCcEEEEeCCCCCCCC-----CCHHHHHHhhHHH----HHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHH
Q 020875 77 ----EACTGVNIAVMVGGFPRKEG-----MERKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKE 143 (320)
Q Consensus 77 ----~al~~aDvVi~~ag~~~~~~-----~~r~~~~~~n~~~----~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~ 143 (320)
+.....|++|+.||....+. ...+..+..|... ++.+.+.+++. .+++|++|+-.......-..
T Consensus 85 ~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~---~~riv~vsS~~~~~~~~~~~ 161 (313)
T PRK05854 85 EQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG---RARVTSQSSIAARRGAINWD 161 (313)
T ss_pred HHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC---CCCeEEEechhhcCCCcCcc
Confidence 12345899999998743211 1223456667655 34444444432 25677776533211000000
Q ss_pred ---HCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeee
Q 020875 144 ---FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182 (320)
Q Consensus 144 ---~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~ 182 (320)
....++....|+.+++-...+-..+++.+......|+..
T Consensus 162 ~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~ 203 (313)
T PRK05854 162 DLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSN 203 (313)
T ss_pred cccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEE
Confidence 001223334577777777777777887765545567643
No 286
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=97.88 E-value=0.0002 Score=63.73 Aligned_cols=154 Identities=18% Similarity=0.175 Sum_probs=83.0
Q ss_pred EEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhh-----
Q 020875 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA----- 78 (320)
Q Consensus 7 kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~a----- 78 (320)
+++|+||+|.+|.+++..|++.|. +|++++++. +.++....++...... ...++....+..++
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~ 72 (254)
T TIGR02415 2 VALVTGGAQGIGKGIAERLAKDGF-------AVAVADLNE--ETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAA 72 (254)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 689999999999999999999886 789998763 2333222233221100 01122221222222
Q ss_pred --cCCCcEEEEeCCCCCC-C--CCCHH---HHHHhhHHHHHH----HHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCC
Q 020875 79 --CTGVNIAVMVGGFPRK-E--GMERK---DVMSKNVSIYKA----QASALEQHAAPNCKVLVVANPANTNALILKEFAP 146 (320)
Q Consensus 79 --l~~aDvVi~~ag~~~~-~--~~~r~---~~~~~n~~~~~~----i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~ 146 (320)
+...|+|||++|.... + ..+.. ..+..|+..... +.+.+++.. ...+++++|.-... .
T Consensus 73 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~~iv~~sS~~~~---------~ 142 (254)
T TIGR02415 73 EKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQG-HGGKIINAASIAGH---------E 142 (254)
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCC-CCeEEEEecchhhc---------C
Confidence 3457999999987421 1 12222 346677655444 444444433 33566666642211 1
Q ss_pred CCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 147 ~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
+.|...-|+.++.-...+...+++.+. +..++.
T Consensus 143 ~~~~~~~Y~~sK~a~~~~~~~l~~~~~--~~~i~v 175 (254)
T TIGR02415 143 GNPILSAYSSTKFAVRGLTQTAAQELA--PKGITV 175 (254)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHhc--ccCeEE
Confidence 222222456665555556666666654 334553
No 287
>PRK05650 short chain dehydrogenase; Provisional
Probab=97.88 E-value=9.8e-05 Score=66.57 Aligned_cols=117 Identities=18% Similarity=0.142 Sum_probs=66.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhh----
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA---- 78 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~a---- 78 (320)
++|+||||+|.+|++++..|+++|. +|++.+++. ++++....++...... ...++....+..+.
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i 71 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGW-------RLALADVNE--EGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQAC 71 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHH
Confidence 4799999999999999999999887 788998863 3333333333221110 01122111112222
Q ss_pred ---cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHH----HHHHHhhhcCCCeEEEEEcCc
Q 020875 79 ---CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKA----QASALEQHAAPNCKVLVVANP 133 (320)
Q Consensus 79 ---l~~aDvVi~~ag~~~~~---~~~---r~~~~~~n~~~~~~----i~~~i~~~~~~~~~viv~snP 133 (320)
+...|+||+.+|..... ..+ ....+..|+..... +.+.+++.. ..+++++|+.
T Consensus 72 ~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~vsS~ 137 (270)
T PRK05650 72 EEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK--SGRIVNIASM 137 (270)
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC--CCEEEEECCh
Confidence 24689999999874321 112 22345677554444 444455443 2466767653
No 288
>PRK05867 short chain dehydrogenase; Provisional
Probab=97.87 E-value=9.9e-05 Score=65.82 Aligned_cols=158 Identities=16% Similarity=0.161 Sum_probs=88.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhh---
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE--- 77 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~--- 77 (320)
+.++++||||+|.+|.+++..|++.|. +|++.+++. ++++....++...... ...++....+..+
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~ 78 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-------QVAIAARHL--DALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLD 78 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEcCCH--HHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence 456899999999999999999999987 899999864 3344333333321110 1112221112222
Q ss_pred ----hcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHhh----hcCCCeEEEEEcCcchhhHHHHHH
Q 020875 78 ----ACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQ----HAAPNCKVLVVANPANTNALILKE 143 (320)
Q Consensus 78 ----al~~aDvVi~~ag~~~~~---~~~---r~~~~~~n~~~~~~i~~~i~~----~~~~~~~viv~snP~~~~~~~~~~ 143 (320)
.+...|++|+.+|..... ..+ ..+.+..|+.....+.+.+.+ .. ....++++++-.. .
T Consensus 79 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~-------~ 150 (253)
T PRK05867 79 QVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQG-QGGVIINTASMSG-------H 150 (253)
T ss_pred HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcC-CCcEEEEECcHHh-------c
Confidence 234789999999874321 112 233456777665555555433 22 2345666653211 0
Q ss_pred HCCCCCCC-cEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 144 FAPSIPAK-NITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 144 ~~~~~~~~-~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
....|.. -.|+.++.....+-+.+++.+. +..|+.
T Consensus 151 -~~~~~~~~~~Y~asKaal~~~~~~la~e~~--~~gI~v 186 (253)
T PRK05867 151 -IINVPQQVSHYCASKAAVIHLTKAMAVELA--PHKIRV 186 (253)
T ss_pred -CCCCCCCccchHHHHHHHHHHHHHHHHHHh--HhCeEE
Confidence 0111222 2466666666677777777764 345653
No 289
>PRK06198 short chain dehydrogenase; Provisional
Probab=97.86 E-value=0.0003 Score=62.77 Aligned_cols=156 Identities=12% Similarity=0.066 Sum_probs=83.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeE-EEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhh--
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVI-LHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA-- 78 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~e-v~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~a-- 78 (320)
.++|+|+||+|.+|++++..|+..|. + |++++++. +.......++...... ...++....+..+.
T Consensus 6 ~k~vlItGa~g~iG~~la~~l~~~G~-------~~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~ 76 (260)
T PRK06198 6 GKVALVTGGTQGLGAAIARAFAERGA-------AGLVICGRNA--EKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVA 76 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCC-------CeEEEEcCCH--HHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence 46899999999999999999999886 5 89999863 2333222223211110 01122111112222
Q ss_pred -----cCCCcEEEEeCCCCCCCC---CCH---HHHHHhhHHHHHHHHHHHhhhc---CCCeEEEEEcCcchhhHHHHHHH
Q 020875 79 -----CTGVNIAVMVGGFPRKEG---MER---KDVMSKNVSIYKAQASALEQHA---APNCKVLVVANPANTNALILKEF 144 (320)
Q Consensus 79 -----l~~aDvVi~~ag~~~~~~---~~r---~~~~~~n~~~~~~i~~~i~~~~---~~~~~viv~snP~~~~~~~~~~~ 144 (320)
+.+.|++|+++|...... .+. ...+..|+.....+.+.+.+.. .....++++|+-...
T Consensus 77 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~-------- 148 (260)
T PRK06198 77 AADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAH-------- 148 (260)
T ss_pred HHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccc--------
Confidence 246899999998754211 122 2346677766666655543321 123456766643211
Q ss_pred CCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 145 ~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
.+.+..-.|+.++.-...+-+.+++.+. +..++
T Consensus 149 -~~~~~~~~Y~~sK~a~~~~~~~~a~e~~--~~~i~ 181 (260)
T PRK06198 149 -GGQPFLAAYCASKGALATLTRNAAYALL--RNRIR 181 (260)
T ss_pred -cCCCCcchhHHHHHHHHHHHHHHHHHhc--ccCeE
Confidence 1222222456665544555555666554 33454
No 290
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=97.85 E-value=0.00027 Score=62.54 Aligned_cols=151 Identities=11% Similarity=0.052 Sum_probs=77.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCC---CcceEEeCChhhh----
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVEA---- 78 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~---~~~v~~~~~~~~a---- 78 (320)
+.++|+||+|++|++++..|++.|. ++++..... .........++....... ..++....+..++
T Consensus 4 k~~lVtG~s~giG~~~a~~l~~~G~-------~vv~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 75 (246)
T PRK12938 4 RIAYVTGGMGGIGTSICQRLHKDGF-------KVVAGCGPN-SPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKV 75 (246)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCC-------EEEEEcCCC-hHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 4789999999999999999999986 666644321 122222222222111110 1122222222222
Q ss_pred ---cCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEEcCcchhhHHHHHHHCCC
Q 020875 79 ---CTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEFAPS 147 (320)
Q Consensus 79 ---l~~aDvVi~~ag~~~~~~---~~---r~~~~~~n~~~~~~i~~~i~~~~--~~~~~viv~snP~~~~~~~~~~~~~~ 147 (320)
+...|+|||++|...... .+ ....+..|......+.+.+.... ....+++++|+.... .+
T Consensus 76 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~---------~~ 146 (246)
T PRK12938 76 KAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQ---------KG 146 (246)
T ss_pred HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhcc---------CC
Confidence 346899999998753211 12 23456777776555444443321 122467777753211 11
Q ss_pred CCCCcEEEeehhhHHHHHHHHHHHcC
Q 020875 148 IPAKNITCLTRLDHNRALGQISEKLN 173 (320)
Q Consensus 148 ~~~~~i~~~t~ld~~r~~~~~a~~l~ 173 (320)
.+....|+.++.....+-..+++.++
T Consensus 147 ~~~~~~y~~sK~a~~~~~~~l~~~~~ 172 (246)
T PRK12938 147 QFGQTNYSTAKAGIHGFTMSLAQEVA 172 (246)
T ss_pred CCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 12112345555444455566666654
No 291
>PRK05855 short chain dehydrogenase; Validated
Probab=97.85 E-value=0.00016 Score=72.07 Aligned_cols=157 Identities=15% Similarity=0.035 Sum_probs=88.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC---CCCcceEEeCChhhh--
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF---PLLKGVVATTDAVEA-- 78 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~---~~~~~v~~~~~~~~a-- 78 (320)
+.++++|+||+|++|.+++..|+++|. +|++.+++. ++++....++..... ....+++...+..+.
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~ 384 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGA-------EVVASDIDE--AAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAE 384 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence 347899999999999999999999987 799999864 333333333322110 001122221122222
Q ss_pred -----cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHH----HhhhcCCCeEEEEEcCcchhhHHHHHH
Q 020875 79 -----CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASA----LEQHAAPNCKVLVVANPANTNALILKE 143 (320)
Q Consensus 79 -----l~~aDvVi~~ag~~~~~---~~~---r~~~~~~n~~~~~~i~~~----i~~~~~~~~~viv~snP~~~~~~~~~~ 143 (320)
+...|++|+.||..... ..+ ....+..|+.....+.+. +.+.+ ..+++|++|+-...
T Consensus 385 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~~------- 456 (582)
T PRK05855 385 WVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERG-TGGHIVNVASAAAY------- 456 (582)
T ss_pred HHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCcEEEEECChhhc-------
Confidence 23579999999975321 112 223566787666555544 44433 34567777754321
Q ss_pred HCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 144 ~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
.+.+..-.|+.++.....+-..+++.+. +..|+.
T Consensus 457 --~~~~~~~~Y~~sKaa~~~~~~~l~~e~~--~~gi~v 490 (582)
T PRK05855 457 --APSRSLPAYATSKAAVLMLSECLRAELA--AAGIGV 490 (582)
T ss_pred --cCCCCCcHHHHHHHHHHHHHHHHHHHhc--ccCcEE
Confidence 1222222466666655556666666654 334553
No 292
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.85 E-value=0.00021 Score=66.53 Aligned_cols=103 Identities=11% Similarity=0.209 Sum_probs=65.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhccc----CCCCcceEEeCChhhhc-C
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA----FPLLKGVVATTDAVEAC-T 80 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~----~~~~~~v~~~~~~~~al-~ 80 (320)
|||+|+| +|.+|++++..|.+.|+ +|.++++++ +.++....+-.+.. ......+..+++..+++ .
T Consensus 1 MkI~IiG-aGa~G~ala~~L~~~g~-------~V~l~~r~~--~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 70 (326)
T PRK14620 1 MKISILG-AGSFGTAIAIALSSKKI-------SVNLWGRNH--TTFESINTKRKNLKYLPTCHLPDNISVKSAIDEVLSD 70 (326)
T ss_pred CEEEEEC-cCHHHHHHHHHHHHCCC-------eEEEEecCH--HHHHHHHHcCCCcccCCCCcCCCCeEEeCCHHHHHhC
Confidence 5899999 59999999999999886 899999863 22222211100110 11223566677777776 5
Q ss_pred CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhh-hcCCCeEEEEEcCcc
Q 020875 81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQ-HAAPNCKVLVVANPA 134 (320)
Q Consensus 81 ~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~-~~~~~~~viv~snP~ 134 (320)
++|+||++.- ...+.++++.+.. +-.++..++..+|=.
T Consensus 71 ~~Dliiiavk----------------s~~~~~~l~~l~~~~l~~~~~vv~~~nGi 109 (326)
T PRK14620 71 NATCIILAVP----------------TQQLRTICQQLQDCHLKKNTPILICSKGI 109 (326)
T ss_pred CCCEEEEEeC----------------HHHHHHHHHHHHHhcCCCCCEEEEEEcCe
Confidence 8999999852 1234455555554 433455677777765
No 293
>PRK09242 tropinone reductase; Provisional
Probab=97.84 E-value=0.00011 Score=65.59 Aligned_cols=158 Identities=13% Similarity=0.111 Sum_probs=88.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhccc--CC---CCcceEEeCC----
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA--FP---LLKGVVATTD---- 74 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~--~~---~~~~v~~~~~---- 74 (320)
+.++++|+||+|.+|..++..|++.|. +|++.+++. +.++....++.... .. ...++....+
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-------~v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~ 78 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-------DVLIVARDA--DALAQARDELAEEFPEREVHGLAADVSDDEDRRAI 78 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHH
Confidence 346899999999999999999999887 899999864 33443333443221 00 0112211111
Q ss_pred ---hhhhcCCCcEEEEeCCCCCC-C--CCC---HHHHHHhhHHHHHHHHHHHhhhc--CCCeEEEEEcCcchhhHHHHHH
Q 020875 75 ---AVEACTGVNIAVMVGGFPRK-E--GME---RKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKE 143 (320)
Q Consensus 75 ---~~~al~~aDvVi~~ag~~~~-~--~~~---r~~~~~~n~~~~~~i~~~i~~~~--~~~~~viv~snP~~~~~~~~~~ 143 (320)
..+.+...|+||+++|.... + ..+ ....+..|+.....+++.+.++- .+...+|++|+-...
T Consensus 79 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~------- 151 (257)
T PRK09242 79 LDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGL------- 151 (257)
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccC-------
Confidence 22334568999999986321 1 112 23356677776666655543311 123567777653211
Q ss_pred HCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 144 ~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
.+.+..-.|+.++.-...+...+|..+. +..++.
T Consensus 152 --~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~~i~v 185 (257)
T PRK09242 152 --THVRSGAPYGMTKAALLQMTRNLAVEWA--EDGIRV 185 (257)
T ss_pred --CCCCCCcchHHHHHHHHHHHHHHHHHHH--HhCeEE
Confidence 1222222466666655666666666653 344553
No 294
>PRK07074 short chain dehydrogenase; Provisional
Probab=97.83 E-value=0.00023 Score=63.55 Aligned_cols=149 Identities=20% Similarity=0.143 Sum_probs=81.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC-CCCcceEEeCChhhhc-----
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVEAC----- 79 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~~~~~~al----- 79 (320)
++++|+||+|++|.+++..|+++|. +|++++++. ++++....++..... ....++....+..+++
T Consensus 3 k~ilItGat~~iG~~la~~L~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 73 (257)
T PRK07074 3 RTALVTGAAGGIGQALARRFLAAGD-------RVLALDIDA--AALAAFADALGDARFVPVACDLTDAASLAAALANAAA 73 (257)
T ss_pred CEEEEECCcchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 4799999999999999999999886 799999864 333322222211100 0011222112222223
Q ss_pred --CCCcEEEEeCCCCCCCC---CCHH---HHHHhhHHHHHHHHHHHhhhc--CCCeEEEEEcCcchhhHHHHHHHCCCCC
Q 020875 80 --TGVNIAVMVGGFPRKEG---MERK---DVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEFAPSIP 149 (320)
Q Consensus 80 --~~aDvVi~~ag~~~~~~---~~r~---~~~~~n~~~~~~i~~~i~~~~--~~~~~viv~snP~~~~~~~~~~~~~~~~ 149 (320)
.+.|+||+++|...... .+.. ..+..|......+++.+.... .....++++|+.... . ..+.
T Consensus 74 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~------~-~~~~- 145 (257)
T PRK07074 74 ERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGM------A-ALGH- 145 (257)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhc------C-CCCC-
Confidence 35899999998643211 1222 234567666666665553221 123456666652211 0 0111
Q ss_pred CCcEEEeehhhHHHHHHHHHHHcC
Q 020875 150 AKNITCLTRLDHNRALGQISEKLN 173 (320)
Q Consensus 150 ~~~i~~~t~ld~~r~~~~~a~~l~ 173 (320)
..++.++.-..++...+++.++
T Consensus 146 --~~y~~sK~a~~~~~~~~a~~~~ 167 (257)
T PRK07074 146 --PAYSAAKAGLIHYTKLLAVEYG 167 (257)
T ss_pred --cccHHHHHHHHHHHHHHHHHHh
Confidence 2456666666677777887765
No 295
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=97.83 E-value=0.00025 Score=62.37 Aligned_cols=154 Identities=14% Similarity=0.142 Sum_probs=80.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccc----hhHHHHHHHhcccCCCCcceEEeCChhhhcCC
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAE----ALNGVKMELVDAAFPLLKGVVATTDAVEACTG 81 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~----~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~ 81 (320)
|+|+|+||+|+||++++..|++++.- ..+.+.+++...+ ++.....|+.+... + ....+.+..
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~~Dls~~~~-----~---~~~~~~~~~ 67 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPD-----ATVHATYRHHKPDFQHDNVQWHALDVTDEAE-----I---KQLSEQFTQ 67 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCC-----CEEEEEccCCccccccCceEEEEecCCCHHH-----H---HHHHHhcCC
Confidence 58999999999999999999987531 2566666543111 00001122222110 0 013344678
Q ss_pred CcEEEEeCCCCCCC---------CCCHH---HHHHhhHHHHH----HHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHC
Q 020875 82 VNIAVMVGGFPRKE---------GMERK---DVMSKNVSIYK----AQASALEQHAAPNCKVLVVANPANTNALILKEFA 145 (320)
Q Consensus 82 aDvVi~~ag~~~~~---------~~~r~---~~~~~n~~~~~----~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~ 145 (320)
.|+||+++|..... ..+.+ ..+..|+.... .+++.+++.. ..+++++|...... ..
T Consensus 68 id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~--~~~i~~iss~~~~~----~~-- 139 (235)
T PRK09009 68 LDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSE--SAKFAVISAKVGSI----SD-- 139 (235)
T ss_pred CCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccC--CceEEEEeeccccc----cc--
Confidence 99999999975321 11222 23445544444 4444444332 24566666432211 00
Q ss_pred CCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 146 PSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 146 ~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
..++..-.|+.++.-...+-..++..+.-....++
T Consensus 140 ~~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~ 174 (235)
T PRK09009 140 NRLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGV 174 (235)
T ss_pred CCCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeE
Confidence 11222235666666666667777777654334555
No 296
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=97.82 E-value=0.00061 Score=60.99 Aligned_cols=158 Identities=13% Similarity=0.115 Sum_probs=84.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhh----
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE---- 77 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~---- 77 (320)
.++++||||+|.+|.+++..|+..|. .+++..++. .+.+.....++...... ...++....+..+
T Consensus 7 ~k~~lItGa~~gIG~~ia~~l~~~G~-------~vvi~~~~~-~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~ 78 (261)
T PRK08936 7 GKVVVITGGSTGLGRAMAVRFGKEKA-------KVVINYRSD-EEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQT 78 (261)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCC-HHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHH
Confidence 47999999999999999999999886 677766642 12222222233221100 0112221111111
Q ss_pred ---hcCCCcEEEEeCCCCCCCC---CCH---HHHHHhhHHHH----HHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHH
Q 020875 78 ---ACTGVNIAVMVGGFPRKEG---MER---KDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNALILKEF 144 (320)
Q Consensus 78 ---al~~aDvVi~~ag~~~~~~---~~r---~~~~~~n~~~~----~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~ 144 (320)
.+...|++|+.+|...... .+. ...+..|+... +.+++.+.+.. ....+|++|+-. .
T Consensus 79 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~-~~g~iv~~sS~~--------~- 148 (261)
T PRK08936 79 AVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHD-IKGNIINMSSVH--------E- 148 (261)
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCcEEEEEcccc--------c-
Confidence 2345799999998743211 122 23456775544 34455555543 346677776521 1
Q ss_pred CCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeee
Q 020875 145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182 (320)
Q Consensus 145 ~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~ 182 (320)
....|..-.|+.++.-...+...+++.+. +..|+..
T Consensus 149 ~~~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~gi~v~ 184 (261)
T PRK08936 149 QIPWPLFVHYAASKGGVKLMTETLAMEYA--PKGIRVN 184 (261)
T ss_pred cCCCCCCcccHHHHHHHHHHHHHHHHHHh--hcCeEEE
Confidence 01233323567666555555556666653 3456543
No 297
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.82 E-value=0.00015 Score=65.92 Aligned_cols=162 Identities=14% Similarity=0.137 Sum_probs=88.9
Q ss_pred CCCCCCEEEEEcCC--ChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCc-cchhHHHHHHHhcccCCCCcceEEeCCh--
Q 020875 1 MAKEPVRVLVTGAA--GQIGYALVPMIARGVMLGTDQPVILHMLDIPPA-AEALNGVKMELVDAAFPLLKGVVATTDA-- 75 (320)
Q Consensus 1 m~~~~~kI~IiGA~--G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~-~~~~~~~~~dl~~~~~~~~~~v~~~~~~-- 75 (320)
|..+.+.++||||+ +.+|..++..|++.|. .|++.++++. .+.++....++... .....++....+.
T Consensus 1 ~~l~~k~~lItGas~~~GIG~aiA~~la~~G~-------~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~ 72 (274)
T PRK08415 1 MIMKGKKGLIVGVANNKSIAYGIAKACFEQGA-------ELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKS 72 (274)
T ss_pred CccCCcEEEEECCCCCCCHHHHHHHHHHHCCC-------EEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHH
Confidence 66777899999986 6899999999999986 7888887631 11222111111100 0011122111111
Q ss_pred -----hhhcCCCcEEEEeCCCCCC-----C--CCCH---HHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHH
Q 020875 76 -----VEACTGVNIAVMVGGFPRK-----E--GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI 140 (320)
Q Consensus 76 -----~~al~~aDvVi~~ag~~~~-----~--~~~r---~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~ 140 (320)
.+.+...|++|+.||.... + ..+. ...+..|+.....+.+.+...-..++++|++|.-...
T Consensus 73 ~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~---- 148 (274)
T PRK08415 73 LAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGV---- 148 (274)
T ss_pred HHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCc----
Confidence 1223467999999997421 1 1222 3456777766555555444432123567777642211
Q ss_pred HHHHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 141 ~~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
...|..-.|+.++---..|-+.+|..+. +..|+.
T Consensus 149 -----~~~~~~~~Y~asKaal~~l~~~la~el~--~~gIrV 182 (274)
T PRK08415 149 -----KYVPHYNVMGVAKAALESSVRYLAVDLG--KKGIRV 182 (274)
T ss_pred -----cCCCcchhhhhHHHHHHHHHHHHHHHhh--hcCeEE
Confidence 1122222466676666677777777764 455663
No 298
>PRK12367 short chain dehydrogenase; Provisional
Probab=97.82 E-value=0.00017 Score=64.41 Aligned_cols=104 Identities=12% Similarity=0.028 Sum_probs=63.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDv 84 (320)
.+++.||||+|.+|.+++..|++.|. +|+++++++. +.++ .. ..........++....+..+.+...|+
T Consensus 14 ~k~~lITGas~gIG~ala~~l~~~G~-------~Vi~~~r~~~-~~~~-~~--~~~~~~~~~~D~~~~~~~~~~~~~iDi 82 (245)
T PRK12367 14 GKRIGITGASGALGKALTKAFRAKGA-------KVIGLTHSKI-NNSE-SN--DESPNEWIKWECGKEESLDKQLASLDV 82 (245)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-------EEEEEECCch-hhhh-hh--ccCCCeEEEeeCCCHHHHHHhcCCCCE
Confidence 36899999999999999999999886 7888887641 1111 00 000000011122222234456678999
Q ss_pred EEEeCCCCCCCCCC---HHHHHHhhHHHHHHHHHHHhh
Q 020875 85 AVMVGGFPRKEGME---RKDVMSKNVSIYKAQASALEQ 119 (320)
Q Consensus 85 Vi~~ag~~~~~~~~---r~~~~~~n~~~~~~i~~~i~~ 119 (320)
+|+.||.......+ ..+.+..|+.....+++.+..
T Consensus 83 lVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 120 (245)
T PRK12367 83 LILNHGINPGGRQDPENINKALEINALSSWRLLELFED 120 (245)
T ss_pred EEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 99999874322222 345677888766666665443
No 299
>PRK06949 short chain dehydrogenase; Provisional
Probab=97.82 E-value=0.00016 Score=64.53 Aligned_cols=157 Identities=15% Similarity=0.180 Sum_probs=84.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhh---
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA--- 78 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~a--- 78 (320)
.++|+|+||+|+||++++..|+..|. +|++.++++ ++++....++...... ...++....+..+.
T Consensus 9 ~k~ilItGasg~IG~~~a~~l~~~G~-------~Vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~ 79 (258)
T PRK06949 9 GKVALVTGASSGLGARFAQVLAQAGA-------KVVLASRRV--ERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAH 79 (258)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence 47999999999999999999999886 788888864 3343333333211100 01112111122222
Q ss_pred ----cCCCcEEEEeCCCCCCCC---C---CHHHHHHhhHHHHHHHHHHHhh----hcC------CCeEEEEEcCcchhhH
Q 020875 79 ----CTGVNIAVMVGGFPRKEG---M---ERKDVMSKNVSIYKAQASALEQ----HAA------PNCKVLVVANPANTNA 138 (320)
Q Consensus 79 ----l~~aDvVi~~ag~~~~~~---~---~r~~~~~~n~~~~~~i~~~i~~----~~~------~~~~viv~snP~~~~~ 138 (320)
+...|++|+++|...... . .....+..|+.....+.+.+.. ... +..+++++++-...
T Consensus 80 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-- 157 (258)
T PRK06949 80 AETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGL-- 157 (258)
T ss_pred HHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECccccc--
Confidence 235899999998643211 1 1233456676666555554432 210 13566666643211
Q ss_pred HHHHHHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 139 LILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 139 ~~~~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
...+....|+.++.....+-..+++.++ +..++.
T Consensus 158 -------~~~~~~~~Y~~sK~a~~~~~~~la~~~~--~~~i~v 191 (258)
T PRK06949 158 -------RVLPQIGLYCMSKAAVVHMTRAMALEWG--RHGINV 191 (258)
T ss_pred -------CCCCCccHHHHHHHHHHHHHHHHHHHHH--hcCeEE
Confidence 1122222355565555566666666654 234553
No 300
>PRK06057 short chain dehydrogenase; Provisional
Probab=97.82 E-value=0.00018 Score=64.25 Aligned_cols=115 Identities=17% Similarity=0.144 Sum_probs=64.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhc-----
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC----- 79 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al----- 79 (320)
.++|+|+||+|++|.+++..|++.|+ +|++++++. ..++....++.. .....++....+..+.+
T Consensus 7 ~~~vlItGasggIG~~~a~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~--~~~~~D~~~~~~~~~~~~~~~~ 75 (255)
T PRK06057 7 GRVAVITGGGSGIGLATARRLAAEGA-------TVVVGDIDP--EAGKAAADEVGG--LFVPTDVTDEDAVNALFDTAAE 75 (255)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHcCC--cEEEeeCCCHHHHHHHHHHHHH
Confidence 36899999999999999999999886 899999864 222222222211 00011111111222222
Q ss_pred --CCCcEEEEeCCCCCC---C--CCC---HHHHHHhhHHHHHHH----HHHHhhhcCCCeEEEEEcC
Q 020875 80 --TGVNIAVMVGGFPRK---E--GME---RKDVMSKNVSIYKAQ----ASALEQHAAPNCKVLVVAN 132 (320)
Q Consensus 80 --~~aDvVi~~ag~~~~---~--~~~---r~~~~~~n~~~~~~i----~~~i~~~~~~~~~viv~sn 132 (320)
...|+||+++|.... + ..+ ....+..|......+ .+.+++.. ...++++|+
T Consensus 76 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~g~iv~~sS 140 (255)
T PRK06057 76 TYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG--KGSIINTAS 140 (255)
T ss_pred HcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC--CcEEEEEcc
Confidence 357999999986421 1 111 234456666554444 44444432 346676665
No 301
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=97.81 E-value=0.00016 Score=57.34 Aligned_cols=74 Identities=18% Similarity=0.231 Sum_probs=43.8
Q ss_pred EEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEE-EEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcEE
Q 020875 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVIL-HMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (320)
Q Consensus 7 kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev-~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDvV 85 (320)
||+|+||+|++|+.++..|.+...+ ++ .++....+ .+....-.........++.......+.+.++|+|
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~------e~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvv 70 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDF------ELVALVSSSRS----AGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVV 70 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTE------EEEEEEESTTT----TTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEE
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCc------cEEEeeeeccc----cCCeeehhccccccccceeEeecchhHhhcCCEE
Confidence 7999999999999999999885543 54 45665421 1211111111111122333333345678999999
Q ss_pred EEeCC
Q 020875 86 VMVGG 90 (320)
Q Consensus 86 i~~ag 90 (320)
|++.+
T Consensus 71 f~a~~ 75 (121)
T PF01118_consen 71 FLALP 75 (121)
T ss_dssp EE-SC
T ss_pred EecCc
Confidence 99853
No 302
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.79 E-value=0.00018 Score=66.31 Aligned_cols=158 Identities=16% Similarity=0.070 Sum_probs=86.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhh---
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA--- 78 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~a--- 78 (320)
.+++.||||+|.+|.+++..|+++|. .|++.|+.. .+.++....++...... ...++....+..+.
T Consensus 12 ~k~~lVTGas~gIG~~ia~~L~~~Ga-------~Vv~~~~~~-~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~ 83 (306)
T PRK07792 12 GKVAVVTGAAAGLGRAEALGLARLGA-------TVVVNDVAS-ALDASDVLDEIRAAGAKAVAVAGDISQRATADELVAT 83 (306)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-------EEEEecCCc-hhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence 47899999999999999999999886 788888753 12233223333221100 11122211112221
Q ss_pred ---cCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHHhhhc---------CCCeEEEEEcCcchhhHHH
Q 020875 79 ---CTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASALEQHA---------APNCKVLVVANPANTNALI 140 (320)
Q Consensus 79 ---l~~aDvVi~~ag~~~~~~---~~---r~~~~~~n~~~~~~i~~~i~~~~---------~~~~~viv~snP~~~~~~~ 140 (320)
+...|++|+.||...... .+ ....+..|+.....+.+.+..+- ...+++|++|+....
T Consensus 84 ~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~---- 159 (306)
T PRK07792 84 AVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGL---- 159 (306)
T ss_pred HHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccc----
Confidence 346899999999864321 22 23456778776666665543211 012466766653311
Q ss_pred HHHHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 141 ~~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
.+.+..-.|+.++.-...+-..+++.+. +..|+.
T Consensus 160 -----~~~~~~~~Y~asKaal~~l~~~la~e~~--~~gI~v 193 (306)
T PRK07792 160 -----VGPVGQANYGAAKAGITALTLSAARALG--RYGVRA 193 (306)
T ss_pred -----cCCCCCchHHHHHHHHHHHHHHHHHHhh--hcCeEE
Confidence 1111111356666655566666666653 355663
No 303
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=97.79 E-value=0.00023 Score=72.91 Aligned_cols=155 Identities=15% Similarity=0.123 Sum_probs=86.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC-----CCCcceEEeCChhhhc
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-----PLLKGVVATTDAVEAC 79 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~-----~~~~~v~~~~~~~~al 79 (320)
.++++||||+|+||++++..|++.|. +|++.|++. +.++....++..... ....+++...+..+++
T Consensus 414 gkvvLVTGasggIG~aiA~~La~~Ga-------~Vvi~~r~~--~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~ 484 (676)
T TIGR02632 414 RRVAFVTGGAGGIGRETARRLAAEGA-------HVVLADLNL--EAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAF 484 (676)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCC-------EEEEEeCCH--HHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHH
Confidence 36899999999999999999999886 899999864 333333233321100 0112232222233333
Q ss_pred -------CCCcEEEEeCCCCCCCC---CCH---HHHHHhhHHHH----HHHHHHHhhhcCCCeEEEEEcCcchhhHHHHH
Q 020875 80 -------TGVNIAVMVGGFPRKEG---MER---KDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNALILK 142 (320)
Q Consensus 80 -------~~aDvVi~~ag~~~~~~---~~r---~~~~~~n~~~~----~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~ 142 (320)
.+.|+||+.||...... .+. ...+..|+... +..++.+++.+ ....+|++|+....
T Consensus 485 ~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~-~~g~IV~iSS~~a~------ 557 (676)
T TIGR02632 485 ADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQG-LGGNIVFIASKNAV------ 557 (676)
T ss_pred HHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEEEeChhhc------
Confidence 36899999999753211 121 22344555433 34455555543 33566666643211
Q ss_pred HHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 143 ~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
.+.+..-.|+.++.....+.+.+++.++- ..|+
T Consensus 558 ---~~~~~~~aY~aSKaA~~~l~r~lA~el~~--~gIr 590 (676)
T TIGR02632 558 ---YAGKNASAYSAAKAAEAHLARCLAAEGGT--YGIR 590 (676)
T ss_pred ---CCCCCCHHHHHHHHHHHHHHHHHHHHhcc--cCeE
Confidence 11222224677777677777778877653 3454
No 304
>PRK07904 short chain dehydrogenase; Provisional
Probab=97.79 E-value=0.00016 Score=64.70 Aligned_cols=157 Identities=12% Similarity=0.146 Sum_probs=83.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcC-cCCCCCCeEEEEEecCCccchhHHHHHHHhcccC-C---CCcceEEeCChh--
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGV-MLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-P---LLKGVVATTDAV-- 76 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~-~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~-~---~~~~v~~~~~~~-- 76 (320)
++++|+|+||+|.+|.+++..|+++| . .|++.+++++. .++....++..... . ...++....+..
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~-------~V~~~~r~~~~-~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~ 78 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPA-------RVVLAALPDDP-RRDAAVAQMKAAGASSVEVIDFDALDTDSHPKV 78 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCC-------eEEEEeCCcch-hHHHHHHHHHhcCCCceEEEEecCCChHHHHHH
Confidence 45789999999999999999999875 4 78899887521 13333333432111 0 011222212211
Q ss_pred --hhc--CCCcEEEEeCCCCCCCCC---CH---HHHHHhhHHHH----HHHHHHHhhhcCCCeEEEEEcCcchhhHHHHH
Q 020875 77 --EAC--TGVNIAVMVGGFPRKEGM---ER---KDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNALILK 142 (320)
Q Consensus 77 --~al--~~aDvVi~~ag~~~~~~~---~r---~~~~~~n~~~~----~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~ 142 (320)
+.. .+.|++|+.+|....... +. .+.+..|+... +.+.+.+++.+ ...++++|+-...
T Consensus 79 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~--~~~iv~isS~~g~------ 150 (253)
T PRK07904 79 IDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG--FGQIIAMSSVAGE------ 150 (253)
T ss_pred HHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC--CceEEEEechhhc------
Confidence 111 379999998887532111 11 13467776544 44666666653 3567777653211
Q ss_pred HHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 143 ~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
.+.+..-.|+.++.-...+-..++..+. +..++.
T Consensus 151 ---~~~~~~~~Y~~sKaa~~~~~~~l~~el~--~~~i~v 184 (253)
T PRK07904 151 ---RVRRSNFVYGSTKAGLDGFYLGLGEALR--EYGVRV 184 (253)
T ss_pred ---CCCCCCcchHHHHHHHHHHHHHHHHHHh--hcCCEE
Confidence 1112222456665544444444554443 344553
No 305
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.79 E-value=0.00024 Score=65.79 Aligned_cols=80 Identities=11% Similarity=0.171 Sum_probs=57.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCc
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aD 83 (320)
+.|||+|+| +|.+|++++..|...|+ +|.++|+++. .++.++++++|
T Consensus 3 ~~m~I~iiG-~G~~G~~lA~~l~~~G~-------~V~~~~r~~~-------------------------~~~~~~~~~ad 49 (308)
T PRK14619 3 QPKTIAILG-AGAWGSTLAGLASANGH-------RVRVWSRRSG-------------------------LSLAAVLADAD 49 (308)
T ss_pred CCCEEEEEC-ccHHHHHHHHHHHHCCC-------EEEEEeCCCC-------------------------CCHHHHHhcCC
Confidence 568999999 69999999999999997 8999998631 14567778999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhh-cCCCeEEEEEcC
Q 020875 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH-AAPNCKVLVVAN 132 (320)
Q Consensus 84 vVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~-~~~~~~viv~sn 132 (320)
+||++.. . ..++++++.+..+ ..++.+++..|+
T Consensus 50 vvi~~vp--~--------------~~~~~v~~~l~~~~~~~~~ivi~~s~ 83 (308)
T PRK14619 50 VIVSAVS--M--------------KGVRPVAEQVQALNLPPETIIVTATK 83 (308)
T ss_pred EEEEECC--h--------------HHHHHHHHHHHHhcCCCCcEEEEeCC
Confidence 9999852 1 1234455555442 224566666665
No 306
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.79 E-value=0.00033 Score=62.86 Aligned_cols=158 Identities=16% Similarity=0.136 Sum_probs=83.8
Q ss_pred CCEEEEEcC--CChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCCh-------
Q 020875 5 PVRVLVTGA--AGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDA------- 75 (320)
Q Consensus 5 ~~kI~IiGA--~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~------- 75 (320)
.++++|||| ++.+|.+++..|++.|. .|++.+++++.+.++....++......+..++....+.
T Consensus 7 ~k~~lItGa~~s~GIG~a~a~~la~~G~-------~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~ 79 (256)
T PRK07889 7 GKRILVTGVITDSSIAFHVARVAQEQGA-------EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRV 79 (256)
T ss_pred CCEEEEeCCCCcchHHHHHHHHHHHCCC-------EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHH
Confidence 468999998 78999999999999887 78898875322222222222211110111222222111
Q ss_pred hhhcCCCcEEEEeCCCCCC-----C--CCCHH---HHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHC
Q 020875 76 VEACTGVNIAVMVGGFPRK-----E--GMERK---DVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFA 145 (320)
Q Consensus 76 ~~al~~aDvVi~~ag~~~~-----~--~~~r~---~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~ 145 (320)
.+.+...|++|+.||.... + ..+.+ ..+..|+.....+.+.+...-.+.+.+++++... .
T Consensus 80 ~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~-~--------- 149 (256)
T PRK07889 80 REHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDA-T--------- 149 (256)
T ss_pred HHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecc-c---------
Confidence 2224568999999987421 1 12222 3467777655555444433211234566655211 0
Q ss_pred CCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 146 PSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 146 ~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
.+.|.-..|+.++.--..+-+.++..+. +..|+.
T Consensus 150 ~~~~~~~~Y~asKaal~~l~~~la~el~--~~gIrv 183 (256)
T PRK07889 150 VAWPAYDWMGVAKAALESTNRYLARDLG--PRGIRV 183 (256)
T ss_pred ccCCccchhHHHHHHHHHHHHHHHHHhh--hcCeEE
Confidence 0112111345666666667777777765 345653
No 307
>PRK08251 short chain dehydrogenase; Provisional
Probab=97.78 E-value=0.00018 Score=63.83 Aligned_cols=148 Identities=15% Similarity=0.186 Sum_probs=80.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhccc--CC---CCcceEEeCCh-----
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA--FP---LLKGVVATTDA----- 75 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~--~~---~~~~v~~~~~~----- 75 (320)
++++||||+|.+|.+++..|+++|. .|++.+++. +++.....++.... .. ...++....+.
T Consensus 3 k~vlItGas~giG~~la~~l~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 73 (248)
T PRK08251 3 QKILITGASSGLGAGMAREFAAKGR-------DLALCARRT--DRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFA 73 (248)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHH
Confidence 5799999999999999999999886 788998864 33333333332211 00 01122211111
Q ss_pred --hhhcCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHHh----hhcCCCeEEEEEcCcchhhHHHHHH
Q 020875 76 --VEACTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASALE----QHAAPNCKVLVVANPANTNALILKE 143 (320)
Q Consensus 76 --~~al~~aDvVi~~ag~~~~~~---~~---r~~~~~~n~~~~~~i~~~i~----~~~~~~~~viv~snP~~~~~~~~~~ 143 (320)
.+.+...|+||+.||+..... .+ ..+.+..|+.....+.+.+. +.. ..++|++|+-...
T Consensus 74 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~------- 144 (248)
T PRK08251 74 EFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG--SGHLVLISSVSAV------- 144 (248)
T ss_pred HHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CCeEEEEeccccc-------
Confidence 223457899999998753221 11 12346677776666655543 333 2456666642211
Q ss_pred HCCCCCC-CcEEEeehhhHHHHHHHHHHHcC
Q 020875 144 FAPSIPA-KNITCLTRLDHNRALGQISEKLN 173 (320)
Q Consensus 144 ~~~~~~~-~~i~~~t~ld~~r~~~~~a~~l~ 173 (320)
.+.|. ...|+.++.....+...++..+.
T Consensus 145 --~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~ 173 (248)
T PRK08251 145 --RGLPGVKAAYAASKAGVASLGEGLRAELA 173 (248)
T ss_pred --cCCCCCcccHHHHHHHHHHHHHHHHHHhc
Confidence 12232 12355555444445555555554
No 308
>PRK08324 short chain dehydrogenase; Validated
Probab=97.76 E-value=0.00028 Score=72.34 Aligned_cols=154 Identities=19% Similarity=0.150 Sum_probs=84.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC--CCCcceEEeCChhhhc----
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF--PLLKGVVATTDAVEAC---- 79 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~--~~~~~v~~~~~~~~al---- 79 (320)
++|+||||+|++|++++..|+..|. +|+++|++. +.+......+..... ....++....+..+++
T Consensus 423 k~vLVTGasggIG~~la~~L~~~Ga-------~Vvl~~r~~--~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~ 493 (681)
T PRK08324 423 KVALVTGAAGGIGKATAKRLAAEGA-------CVVLADLDE--EAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAA 493 (681)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCcC-------EEEEEeCCH--HHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHH
Confidence 6899999999999999999999886 799999874 333322222322100 0011221111222222
Q ss_pred ---CCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHHh----hhcCCCeEEEEEcCcchhhHHHHHHHCC
Q 020875 80 ---TGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASALE----QHAAPNCKVLVVANPANTNALILKEFAP 146 (320)
Q Consensus 80 ---~~aDvVi~~ag~~~~~~---~~---r~~~~~~n~~~~~~i~~~i~----~~~~~~~~viv~snP~~~~~~~~~~~~~ 146 (320)
.+.|+||++||...... .+ ....+..|+.....+++.+. +.. ..+.+|++|+-... .
T Consensus 494 ~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~~g~iV~vsS~~~~---------~ 563 (681)
T PRK08324 494 LAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQG-LGGSIVFIASKNAV---------N 563 (681)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCcEEEEECCcccc---------C
Confidence 36899999999753211 12 22346677776666655443 332 23567777653211 0
Q ss_pred CCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 147 ~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
+.+..-.|+.++.....+.+.++..++ +..|+
T Consensus 564 ~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gIr 595 (681)
T PRK08324 564 PGPNFGAYGAAKAAELHLVRQLALELG--PDGIR 595 (681)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHhc--ccCeE
Confidence 111112355555555556666666654 33454
No 309
>PRK06484 short chain dehydrogenase; Validated
Probab=97.76 E-value=0.00017 Score=71.44 Aligned_cols=124 Identities=19% Similarity=0.107 Sum_probs=71.0
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCCh-----
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDA----- 75 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~----- 75 (320)
|+.+.+.++||||++.+|.+++..|++.|. .|++++++. ++++....++......+..++....+.
T Consensus 1 ~~~~~k~~lITGas~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 71 (520)
T PRK06484 1 SKAQSRVVLVTGAAGGIGRAACQRFARAGD-------QVVVADRNV--ERARERADSLGPDHHALAMDVSDEAQIREGFE 71 (520)
T ss_pred CCCCCeEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhCCceeEEEeccCCHHHHHHHHH
Confidence 455667899999999999999999999986 799999864 333322222211100011122211122
Q ss_pred --hhhcCCCcEEEEeCCCCC---CC--CCC---HHHHHHhhHHHHHHHHHHHhhh---cCCCeEEEEEcCc
Q 020875 76 --VEACTGVNIAVMVGGFPR---KE--GME---RKDVMSKNVSIYKAQASALEQH---AAPNCKVLVVANP 133 (320)
Q Consensus 76 --~~al~~aDvVi~~ag~~~---~~--~~~---r~~~~~~n~~~~~~i~~~i~~~---~~~~~~viv~snP 133 (320)
.+.+...|++|+.||... .+ ..+ ....+..|+.....+.+.+..+ ......+|++|+-
T Consensus 72 ~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~ 142 (520)
T PRK06484 72 QLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASG 142 (520)
T ss_pred HHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCc
Confidence 222346899999998721 11 112 2345677776555555544443 1123367777753
No 310
>PRK12743 oxidoreductase; Provisional
Probab=97.75 E-value=0.00069 Score=60.53 Aligned_cols=151 Identities=11% Similarity=0.104 Sum_probs=81.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhh-----
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE----- 77 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~----- 77 (320)
.+|+|+||+|.+|++++..|++.|. +|++.++.. .+.++....++...... ...++....+..+
T Consensus 3 k~vlItGas~giG~~~a~~l~~~G~-------~V~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 74 (256)
T PRK12743 3 QVAIVTASDSGIGKACALLLAQQGF-------DIGITWHSD-EEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKL 74 (256)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCC-hHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHH
Confidence 4899999999999999999999987 777765432 22233222233221100 0112211111112
Q ss_pred --hcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHhhhc---CCCeEEEEEcCcchhhHHHHHHHCC
Q 020875 78 --ACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHA---APNCKVLVVANPANTNALILKEFAP 146 (320)
Q Consensus 78 --al~~aDvVi~~ag~~~~~---~~~---r~~~~~~n~~~~~~i~~~i~~~~---~~~~~viv~snP~~~~~~~~~~~~~ 146 (320)
.+...|+||+.+|..... ..+ ..+.+..|+.....+.+.+..+- ...+++|++|+-... .
T Consensus 75 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~---------~ 145 (256)
T PRK12743 75 IQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH---------T 145 (256)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc---------C
Confidence 224579999999874321 112 23456677776666666554431 123567777753211 1
Q ss_pred CCCCCcEEEeehhhHHHHHHHHHHHcC
Q 020875 147 SIPAKNITCLTRLDHNRALGQISEKLN 173 (320)
Q Consensus 147 ~~~~~~i~~~t~ld~~r~~~~~a~~l~ 173 (320)
+.+..-.|+.++.....+...+++.+.
T Consensus 146 ~~~~~~~Y~~sK~a~~~l~~~la~~~~ 172 (256)
T PRK12743 146 PLPGASAYTAAKHALGGLTKAMALELV 172 (256)
T ss_pred CCCCcchhHHHHHHHHHHHHHHHHHhh
Confidence 122222455555555556666666654
No 311
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.75 E-value=0.00025 Score=69.04 Aligned_cols=120 Identities=27% Similarity=0.308 Sum_probs=71.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhh-------
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVE------- 77 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~------- 77 (320)
.++++||||+|.+|..++..|++.|. +++++|+..+.+.+.....++.. .....++....+..+
T Consensus 210 g~~vlItGasggIG~~la~~l~~~Ga-------~vi~~~~~~~~~~l~~~~~~~~~--~~~~~Dv~~~~~~~~~~~~~~~ 280 (450)
T PRK08261 210 GKVALVTGAARGIGAAIAEVLARDGA-------HVVCLDVPAAGEALAAVANRVGG--TALALDITAPDAPARIAEHLAE 280 (450)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC-------EEEEEeCCccHHHHHHHHHHcCC--eEEEEeCCCHHHHHHHHHHHHH
Confidence 36899999999999999999999886 78888875432322222211110 000011111111111
Q ss_pred hcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHhhh--cCCCeEEEEEcCc
Q 020875 78 ACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQH--AAPNCKVLVVANP 133 (320)
Q Consensus 78 al~~aDvVi~~ag~~~~~---~~~---r~~~~~~n~~~~~~i~~~i~~~--~~~~~~viv~snP 133 (320)
.....|+|||++|..... ..+ ....+..|+.....+.+.+... ..+..++|++|+.
T Consensus 281 ~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~ 344 (450)
T PRK08261 281 RHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSI 344 (450)
T ss_pred hCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECCh
Confidence 123589999999975421 112 3345778888888888887662 1134577777753
No 312
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=97.74 E-value=0.00019 Score=63.32 Aligned_cols=118 Identities=19% Similarity=0.124 Sum_probs=66.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC---CCCcceEEeCChhhh----
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF---PLLKGVVATTDAVEA---- 78 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~---~~~~~v~~~~~~~~a---- 78 (320)
++++|+||+|++|++++..|++.|. .|++.+++.. +.+......+.+... ....++....+..++
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~-------~vi~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 74 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGY-------RVIATYFSGN-DCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEI 74 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEeCCcH-HHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 4899999999999999999998886 7888888642 112111111111100 001122221222222
Q ss_pred ---cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHH----HHHHhhhcCCCeEEEEEcCc
Q 020875 79 ---CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQ----ASALEQHAAPNCKVLVVANP 133 (320)
Q Consensus 79 ---l~~aDvVi~~ag~~~~~---~~~---r~~~~~~n~~~~~~i----~~~i~~~~~~~~~viv~snP 133 (320)
+...|++|+.+|..... ..+ ....+..|+.....+ .+.+++. +..++|++|+.
T Consensus 75 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~iv~iss~ 140 (245)
T PRK12824 75 EEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ--GYGRIINISSV 140 (245)
T ss_pred HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh--CCeEEEEECCh
Confidence 33589999999864311 112 233556777766665 4444544 34577777754
No 313
>PRK14982 acyl-ACP reductase; Provisional
Probab=97.74 E-value=0.00023 Score=66.44 Aligned_cols=98 Identities=22% Similarity=0.324 Sum_probs=64.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhc-CcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCC
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~-~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~a 82 (320)
..++|+||||+|++|+.++..|..+ +. .+++++++++ +++.....++.+. ++ .++.+++.++
T Consensus 154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv------~~lilv~R~~--~rl~~La~el~~~------~i---~~l~~~l~~a 216 (340)
T PRK14982 154 SKATVAVVGATGDIGSAVCRWLDAKTGV------AELLLVARQQ--ERLQELQAELGGG------KI---LSLEEALPEA 216 (340)
T ss_pred CCCEEEEEccChHHHHHHHHHHHhhCCC------CEEEEEcCCH--HHHHHHHHHhccc------cH---HhHHHHHccC
Confidence 3479999999999999999999854 43 2789998863 4444333333211 11 1467889999
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhh
Q 020875 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTN 137 (320)
Q Consensus 83 DvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~ 137 (320)
|+||++++.+...-.+..++ . +...++=++-|=|+-
T Consensus 217 DiVv~~ts~~~~~~I~~~~l------------------~-~~~~viDiAvPRDVd 252 (340)
T PRK14982 217 DIVVWVASMPKGVEIDPETL------------------K-KPCLMIDGGYPKNLD 252 (340)
T ss_pred CEEEECCcCCcCCcCCHHHh------------------C-CCeEEEEecCCCCCC
Confidence 99999998765211222111 1 346777788887653
No 314
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=97.74 E-value=0.00056 Score=61.32 Aligned_cols=156 Identities=11% Similarity=0.111 Sum_probs=85.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC----CCCcceEEeCCh-----
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF----PLLKGVVATTDA----- 75 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~----~~~~~v~~~~~~----- 75 (320)
.++++||||++.||.+++..|++.|. .|++.+++. .+.++....++..... ....+++...+.
T Consensus 8 ~k~vlItGas~gIG~~ia~~l~~~G~-------~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 79 (260)
T PRK08416 8 GKTLVISGGTRGIGKAIVYEFAQSGV-------NIAFTYNSN-VEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFK 79 (260)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEcCCC-HHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence 46899999999999999999999886 777765432 2334433334432110 011222221111
Q ss_pred --hhhcCCCcEEEEeCCCCCC-------C--CCC---HHHHHHhhHHH----HHHHHHHHhhhcCCCeEEEEEcCcchhh
Q 020875 76 --VEACTGVNIAVMVGGFPRK-------E--GME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTN 137 (320)
Q Consensus 76 --~~al~~aDvVi~~ag~~~~-------~--~~~---r~~~~~~n~~~----~~~i~~~i~~~~~~~~~viv~snP~~~~ 137 (320)
.+.+...|++|+.||.... + ..+ ....+..|+.. .+.+.+.+++. +.+.+|++|+..+.
T Consensus 80 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~g~iv~isS~~~~- 156 (260)
T PRK08416 80 KIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKV--GGGSIISLSSTGNL- 156 (260)
T ss_pred HHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhcc--CCEEEEEEeccccc-
Confidence 1223468999999975311 1 011 11234444433 34455555543 23567777754321
Q ss_pred HHHHHHHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 138 ALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 138 ~~~~~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
...|..-.|+.++.....+-..+++.+. +..|+.
T Consensus 157 --------~~~~~~~~Y~asK~a~~~~~~~la~el~--~~gi~v 190 (260)
T PRK08416 157 --------VYIENYAGHGTSKAAVETMVKYAATELG--EKNIRV 190 (260)
T ss_pred --------cCCCCcccchhhHHHHHHHHHHHHHHhh--hhCeEE
Confidence 0112122577788777788888888875 345553
No 315
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.74 E-value=0.0011 Score=60.24 Aligned_cols=157 Identities=19% Similarity=0.191 Sum_probs=95.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCC-----CcceEEeCChh--
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-----LKGVVATTDAV-- 76 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~-----~~~v~~~~~~~-- 76 (320)
..+.|+||||+..||.++|+.|+..|. .++++.+.. ++++-...++....... ..++....+..
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~-------~l~lvar~~--rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~ 81 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGA-------KLVLVARRA--RRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKF 81 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-------ceEEeehhh--hhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHH
Confidence 456899999999999999999999997 566666643 34444434444332111 12333323333
Q ss_pred -----hhcCCCcEEEEeCCCCCCCCC---C---HHHHHHhh----HHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHH
Q 020875 77 -----EACTGVNIAVMVGGFPRKEGM---E---RKDVMSKN----VSIYKAQASALEQHAAPNCKVLVVANPANTNALIL 141 (320)
Q Consensus 77 -----~al~~aDvVi~~ag~~~~~~~---~---r~~~~~~n----~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~ 141 (320)
.-+.+.|+.|+-||+....-. + ....++.| +-.++..++.+++.+ ++.++++++..+-+
T Consensus 82 ~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~--~GhIVvisSiaG~~---- 155 (282)
T KOG1205|consen 82 VEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN--DGHIVVISSIAGKM---- 155 (282)
T ss_pred HHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC--CCeEEEEecccccc----
Confidence 346789999999998762211 1 22345555 456788888888874 57777777655322
Q ss_pred HHHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 142 ~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
.+|..-+|..|+-.-..|-..+...+.-....|+
T Consensus 156 -----~~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~ 189 (282)
T KOG1205|consen 156 -----PLPFRSIYSASKHALEGFFETLRQELIPLGTIII 189 (282)
T ss_pred -----CCCcccccchHHHHHHHHHHHHHHHhhccCceEE
Confidence 3444347777766555555555555554444444
No 316
>PRK08862 short chain dehydrogenase; Provisional
Probab=97.70 E-value=0.0016 Score=57.49 Aligned_cols=156 Identities=11% Similarity=0.001 Sum_probs=85.3
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCCh--
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDA-- 75 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~-- 75 (320)
|+.+.+.++|+||++.+|.+++..|++.|. .|++.++++ ++++....++...... +..++....+.
T Consensus 1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~-------~V~~~~r~~--~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~ 71 (227)
T PRK08862 1 MDIKSSIILITSAGSVLGRTISCHFARLGA-------TLILCDQDQ--SALKDTYEQCSALTDNVYSFQLKDFSQESIRH 71 (227)
T ss_pred CCCCCeEEEEECCccHHHHHHHHHHHHCCC-------EEEEEcCCH--HHHHHHHHHHHhcCCCeEEEEccCCCHHHHHH
Confidence 666678999999999999999999999987 799998864 3443333333221111 00111111111
Q ss_pred -----hhhcC-CCcEEEEeCCCCCCC----CCCHHH---HHHhhHH----HHHHHHHHHhhhcCCCeEEEEEcCcchhhH
Q 020875 76 -----VEACT-GVNIAVMVGGFPRKE----GMERKD---VMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNA 138 (320)
Q Consensus 76 -----~~al~-~aDvVi~~ag~~~~~----~~~r~~---~~~~n~~----~~~~i~~~i~~~~~~~~~viv~snP~~~~~ 138 (320)
.+.+. ..|++|+.+|....+ ..+.++ .+..|.. ..+.+.+.+.+.. ..+.+|++|+-.
T Consensus 72 ~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~-~~g~Iv~isS~~---- 146 (227)
T PRK08862 72 LFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRN-KKGVIVNVISHD---- 146 (227)
T ss_pred HHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCceEEEEecCC----
Confidence 12234 689999999742211 122222 2333433 3344455565543 345677777521
Q ss_pred HHHHHHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 139 LILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 139 ~~~~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
+++..-.|+.++---..+.+.++..+. +..|+
T Consensus 147 --------~~~~~~~Y~asKaal~~~~~~la~el~--~~~Ir 178 (227)
T PRK08862 147 --------DHQDLTGVESSNALVSGFTHSWAKELT--PFNIR 178 (227)
T ss_pred --------CCCCcchhHHHHHHHHHHHHHHHHHHh--hcCcE
Confidence 112112345555555566666777654 34455
No 317
>PRK08655 prephenate dehydrogenase; Provisional
Probab=97.70 E-value=0.00067 Score=65.82 Aligned_cols=66 Identities=18% Similarity=0.320 Sum_probs=48.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcEE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDvV 85 (320)
|||+|+||+|.+|..++..|...|+ +|.++|+++ +.+...+.++ .+...++..+++.++|+|
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~-------~V~v~~r~~--~~~~~~a~~~---------gv~~~~~~~e~~~~aDvV 62 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGF-------EVIVTGRDP--KKGKEVAKEL---------GVEYANDNIDAAKDADIV 62 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCC-------EEEEEECCh--HHHHHHHHHc---------CCeeccCHHHHhccCCEE
Confidence 6899999789999999999999886 799999864 2222122111 122344667888999999
Q ss_pred EEeC
Q 020875 86 VMVG 89 (320)
Q Consensus 86 i~~a 89 (320)
|++.
T Consensus 63 Ilav 66 (437)
T PRK08655 63 IISV 66 (437)
T ss_pred EEec
Confidence 9986
No 318
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.69 E-value=0.00016 Score=66.36 Aligned_cols=119 Identities=22% Similarity=0.196 Sum_probs=70.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCC--CcceEEeCChh------
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL--LKGVVATTDAV------ 76 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~--~~~v~~~~~~~------ 76 (320)
.++++||||+|.+|.+++..|++.|. +|++.++++ ++++....++....... ..++....+..
T Consensus 9 gk~vlItGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~ 79 (296)
T PRK05872 9 GKVVVVTGAARGIGAELARRLHARGA-------KLALVDLEE--AELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEA 79 (296)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHH
Confidence 36899999999999999999999987 799999864 33443333332111000 01222111121
Q ss_pred -hhcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHhhhc-CCCeEEEEEcC
Q 020875 77 -EACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHA-APNCKVLVVAN 132 (320)
Q Consensus 77 -~al~~aDvVi~~ag~~~~~---~~~---r~~~~~~n~~~~~~i~~~i~~~~-~~~~~viv~sn 132 (320)
+.+...|+||+.||..... ..+ ..+.+..|+.....+++.+..+- ...+.+|++|+
T Consensus 80 ~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS 143 (296)
T PRK05872 80 VERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSS 143 (296)
T ss_pred HHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 2235689999999974311 112 23456778777777766665431 12356777764
No 319
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=97.69 E-value=0.00043 Score=62.14 Aligned_cols=160 Identities=14% Similarity=0.168 Sum_probs=86.2
Q ss_pred CCCEEEEEcCC--ChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC---CCCcceEEeCChh--
Q 020875 4 EPVRVLVTGAA--GQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF---PLLKGVVATTDAV-- 76 (320)
Q Consensus 4 ~~~kI~IiGA~--G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~---~~~~~v~~~~~~~-- 76 (320)
+.+.++||||+ +.+|..++..|++.|. +|++.+++.+..+.+....++.+... ....++....+..
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~-------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~ 77 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-------ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEET 77 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCC-------EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHH
Confidence 44688999975 6899999999999887 77777654321122222222221110 1112222211221
Q ss_pred -----hhcCCCcEEEEeCCCCCC-----C--CCCH---HHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHH
Q 020875 77 -----EACTGVNIAVMVGGFPRK-----E--GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALIL 141 (320)
Q Consensus 77 -----~al~~aDvVi~~ag~~~~-----~--~~~r---~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~ 141 (320)
+.+...|++|+.||.... + ..+. ...+..|+.....+.+.+...-...+++|++|+....
T Consensus 78 ~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~----- 152 (258)
T PRK07370 78 FETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGV----- 152 (258)
T ss_pred HHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccc-----
Confidence 223468999999987431 1 1122 3345666655555444443322123567777753211
Q ss_pred HHHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 142 ~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
.+.|..-.|+.++.--..+-+.++..++ +..|+.
T Consensus 153 ----~~~~~~~~Y~asKaal~~l~~~la~el~--~~gI~V 186 (258)
T PRK07370 153 ----RAIPNYNVMGVAKAALEASVRYLAAELG--PKNIRV 186 (258)
T ss_pred ----cCCcccchhhHHHHHHHHHHHHHHHHhC--cCCeEE
Confidence 1223223567777766677777888875 456663
No 320
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.68 E-value=0.00035 Score=62.39 Aligned_cols=156 Identities=14% Similarity=0.124 Sum_probs=83.6
Q ss_pred CCCCCCEEEEEcCCC--hhHHHHHHHHHhcCcCCCCCCeEEEEEecCCc----------cchhHHHHHHHhcccCC---C
Q 020875 1 MAKEPVRVLVTGAAG--QIGYALVPMIARGVMLGTDQPVILHMLDIPPA----------AEALNGVKMELVDAAFP---L 65 (320)
Q Consensus 1 m~~~~~kI~IiGA~G--~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~----------~~~~~~~~~dl~~~~~~---~ 65 (320)
|+.+.++|.|+||+| .+|.+++..|++.|. +|++.++++. .+... ...++...... .
T Consensus 1 ~~l~~k~vlItGas~~~giG~~la~~l~~~G~-------~vi~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 72 (256)
T PRK12748 1 LPLMKKIALVTGASRLNGIGAAVCRRLAAKGI-------DIFFTYWSPYDKTMPWGMHDKEPVL-LKEEIESYGVRCEHM 72 (256)
T ss_pred CCCCCcEEEEeCCCCCCCHHHHHHHHHHHcCC-------cEEEEcCCccccccccccchhhHHH-HHHHHHhcCCeEEEE
Confidence 566677899999985 699999999999886 7888887511 11111 11222111100 0
Q ss_pred CcceEEeCChh-------hhcCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHHhhhcC--CCeEEEEE
Q 020875 66 LKGVVATTDAV-------EACTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASALEQHAA--PNCKVLVV 130 (320)
Q Consensus 66 ~~~v~~~~~~~-------~al~~aDvVi~~ag~~~~~~---~~---r~~~~~~n~~~~~~i~~~i~~~~~--~~~~viv~ 130 (320)
..++....+.. +.+...|+||++||...... .+ ....+..|+.....+.+.+.+.-. +...+|++
T Consensus 73 ~~D~~~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ 152 (256)
T PRK12748 73 EIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINL 152 (256)
T ss_pred ECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEE
Confidence 11221111111 12345799999998642211 12 234577888877777777654311 23467777
Q ss_pred cCcchhhHHHHHHHCCCCCCCcEEEeehhhHHHHHHHHHHHcC
Q 020875 131 ANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (320)
Q Consensus 131 snP~~~~~~~~~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~ 173 (320)
|.-.. + ...+..-.|+.++.-...+...+++.+.
T Consensus 153 ss~~~--------~-~~~~~~~~Y~~sK~a~~~~~~~la~e~~ 186 (256)
T PRK12748 153 TSGQS--------L-GPMPDELAYAATKGAIEAFTKSLAPELA 186 (256)
T ss_pred CCccc--------c-CCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 64211 0 1122112355555544555556666654
No 321
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=97.67 E-value=0.00032 Score=61.84 Aligned_cols=147 Identities=14% Similarity=0.089 Sum_probs=78.8
Q ss_pred EEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhh-------
Q 020875 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE------- 77 (320)
Q Consensus 8 I~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~------- 77 (320)
|.|+||+|++|.+++..|+++|. +++++++.. .+.++....++.+.... ...++....+..+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~-------~v~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 72 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGF-------EICVHYHSG-RSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIA 72 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCC-HHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 57999999999999999999987 788777642 22333222233221110 1112211112222
Q ss_pred hcCCCcEEEEeCCCCCCCC------CCHHHHHHhhHHHHHHHHHHHh----hhcCCCeEEEEEcCcchhhHHHHHHHCCC
Q 020875 78 ACTGVNIAVMVGGFPRKEG------MERKDVMSKNVSIYKAQASALE----QHAAPNCKVLVVANPANTNALILKEFAPS 147 (320)
Q Consensus 78 al~~aDvVi~~ag~~~~~~------~~r~~~~~~n~~~~~~i~~~i~----~~~~~~~~viv~snP~~~~~~~~~~~~~~ 147 (320)
.+...|.+|+.+|...... .+....+..|+.....+.+.+. +.. +...+|++|+.... .+
T Consensus 73 ~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~iv~vsS~~~~---------~~ 142 (239)
T TIGR01831 73 EHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRAR-QGGRIITLASVSGV---------MG 142 (239)
T ss_pred HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhc-CCeEEEEEcchhhc---------cC
Confidence 2335699999998643211 1234467788877766665431 212 34567777764321 12
Q ss_pred CCCCcEEEeehhhHHHHHHHHHHHc
Q 020875 148 IPAKNITCLTRLDHNRALGQISEKL 172 (320)
Q Consensus 148 ~~~~~i~~~t~ld~~r~~~~~a~~l 172 (320)
.|...-|+.++.-...+-+.++..+
T Consensus 143 ~~~~~~Y~~sK~a~~~~~~~la~e~ 167 (239)
T TIGR01831 143 NRGQVNYSAAKAGLIGATKALAVEL 167 (239)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHH
Confidence 2222245555543334444555554
No 322
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=97.66 E-value=0.00026 Score=56.71 Aligned_cols=102 Identities=16% Similarity=0.139 Sum_probs=55.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDv 84 (320)
.+||+||| +|.||.+|+..|.+.|+ +|.-+-.. +.+.. ..+... ...... .++.+.++++|+
T Consensus 10 ~l~I~iIG-aGrVG~~La~aL~~ag~-------~v~~v~sr-s~~sa----~~a~~~----~~~~~~-~~~~~~~~~aDl 71 (127)
T PF10727_consen 10 RLKIGIIG-AGRVGTALARALARAGH-------EVVGVYSR-SPASA----ERAAAF----IGAGAI-LDLEEILRDADL 71 (127)
T ss_dssp --EEEEEC-TSCCCCHHHHHHHHTTS-------EEEEESSC-HH-HH----HHHHC------TT------TTGGGCC-SE
T ss_pred ccEEEEEC-CCHHHHHHHHHHHHCCC-------eEEEEEeC-Ccccc----cccccc----cccccc-cccccccccCCE
Confidence 48999999 59999999999999987 66554322 11111 111111 111111 246678899999
Q ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhh--cCCCeEEEEEcC---cchhhHHHH
Q 020875 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH--AAPNCKVLVVAN---PANTNALIL 141 (320)
Q Consensus 85 Vi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~--~~~~~~viv~sn---P~~~~~~~~ 141 (320)
+|++.. + ..+.++++.+..+ -.|+ .+++-++ +++++..+.
T Consensus 72 v~iavp-----D-----------daI~~va~~La~~~~~~~g-~iVvHtSGa~~~~vL~p~~ 116 (127)
T PF10727_consen 72 VFIAVP-----D-----------DAIAEVAEQLAQYGAWRPG-QIVVHTSGALGSDVLAPAR 116 (127)
T ss_dssp EEE-S------C-----------CHHHHHHHHHHCC--S-TT--EEEES-SS--GGGGHHHH
T ss_pred EEEEec-----h-----------HHHHHHHHHHHHhccCCCC-cEEEECCCCChHHhhhhHH
Confidence 999852 1 1346677777776 2133 4555543 566776653
No 323
>PRK06953 short chain dehydrogenase; Provisional
Probab=97.64 E-value=0.00042 Score=60.53 Aligned_cols=115 Identities=19% Similarity=0.114 Sum_probs=68.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC-CCcceEEeCChhh---hcC-
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVATTDAVE---ACT- 80 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~-~~~~v~~~~~~~~---al~- 80 (320)
+++.|+||+|.+|++++..|++.|. +|++++++. +.++. +...... ...++....+..+ .+.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-------~v~~~~r~~--~~~~~----~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 68 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-------RVIATARDA--AALAA----LQALGAEALALDVADPASVAGLAWKLDG 68 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-------EEEEEECCH--HHHHH----HHhccceEEEecCCCHHHHHHHHHHhcC
Confidence 4899999999999999999998886 899999863 22221 1111100 1112222222222 233
Q ss_pred -CCcEEEEeCCCCCC---C--CCC---HHHHHHhhHHHHHHHHHHHhhhcC-CCeEEEEEcCc
Q 020875 81 -GVNIAVMVGGFPRK---E--GME---RKDVMSKNVSIYKAQASALEQHAA-PNCKVLVVANP 133 (320)
Q Consensus 81 -~aDvVi~~ag~~~~---~--~~~---r~~~~~~n~~~~~~i~~~i~~~~~-~~~~viv~snP 133 (320)
..|+||+++|.... + ..+ ....+..|+.....+.+.+.++-. ....++++++.
T Consensus 69 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~ 131 (222)
T PRK06953 69 EALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSR 131 (222)
T ss_pred CCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCc
Confidence 48999999987521 1 112 234677888888888777765321 12455666543
No 324
>KOG2711 consensus Glycerol-3-phosphate dehydrogenase/dihydroxyacetone 3-phosphate reductase [Energy production and conversion]
Probab=97.64 E-value=0.00098 Score=61.14 Aligned_cols=108 Identities=23% Similarity=0.323 Sum_probs=66.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHH---HHHHH---hcccCC------CCcceEE
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG---VKMEL---VDAAFP------LLKGVVA 71 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~---~~~dl---~~~~~~------~~~~v~~ 71 (320)
.+.||+|+| +|..|++++..+.++-........+|..+-..+ .+.+ ..-|+ .|...+ ++.++.+
T Consensus 20 ~~~kV~ivG-sGnWGsaiaki~~~n~~~~~~f~~~Vrmwv~ee---~i~~~~~~L~eiIN~~heN~KYlpg~~lP~NvvA 95 (372)
T KOG2711|consen 20 DPLKVCIVG-SGNWGSAIAKIVGENVKEFPIFDPQVRMWVFEE---EINGEAEKLTEIINSRHENVKYLPGIKLPENVVA 95 (372)
T ss_pred CceEEEEEc-cChHHHHHHHHHhhhhhhccccCceeeEEEecc---ccCChhHHHHHHhccccccccccCCccCCCCeEe
Confidence 357999999 799999999888754211101112455444322 2222 11222 122222 3467888
Q ss_pred eCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEc
Q 020875 72 TTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA 131 (320)
Q Consensus 72 ~~~~~~al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~s 131 (320)
.+|+.++++|||++|+.. |. +.+..+++.+..+-+|++..|..+
T Consensus 96 v~dl~ea~~dADilvf~v--Ph--------------Qf~~~ic~~l~g~vk~~~~aISL~ 139 (372)
T KOG2711|consen 96 VPDLVEAAKDADILVFVV--PH--------------QFIPRICEQLKGYVKPGATAISLI 139 (372)
T ss_pred cchHHHHhccCCEEEEeC--Ch--------------hhHHHHHHHHhcccCCCCeEEEee
Confidence 899999999999999973 32 345677888888766666555443
No 325
>PRK07062 short chain dehydrogenase; Provisional
Probab=97.63 E-value=0.00091 Score=59.96 Aligned_cols=118 Identities=19% Similarity=0.164 Sum_probs=67.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC--C---CCcceEEeCChh---
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF--P---LLKGVVATTDAV--- 76 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~--~---~~~~v~~~~~~~--- 76 (320)
.+.++|+||+|.+|.+++..|+++|. .|++.++++ ++++....++..... . ...++....+..
T Consensus 8 ~k~~lItGas~giG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 78 (265)
T PRK07062 8 GRVAVVTGGSSGIGLATVELLLEAGA-------SVAICGRDE--ERLASAEARLREKFPGARLLAARCDVLDEADVAAFA 78 (265)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHH
Confidence 36899999999999999999999887 789999864 334333333322110 0 011221111111
Q ss_pred ----hhcCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHH----HHHHHHHHHhhhcCCCeEEEEEcCc
Q 020875 77 ----EACTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANP 133 (320)
Q Consensus 77 ----~al~~aDvVi~~ag~~~~~~---~~---r~~~~~~n~~----~~~~i~~~i~~~~~~~~~viv~snP 133 (320)
+.+...|++|+.||...... .+ ....+..|.. .++.+.+.+++.. .+.++++|+-
T Consensus 79 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~iv~isS~ 147 (265)
T PRK07062 79 AAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA--AASIVCVNSL 147 (265)
T ss_pred HHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC--CcEEEEeccc
Confidence 12346799999998743211 11 2223444433 4455556565542 3567777653
No 326
>PRK07677 short chain dehydrogenase; Provisional
Probab=97.62 E-value=0.00034 Score=62.29 Aligned_cols=156 Identities=10% Similarity=0.030 Sum_probs=86.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhh-----
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE----- 77 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~----- 77 (320)
++++|+||+|.+|.+++..|++.|. .|++.+++. +.++....++...... ...++....+..+
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~G~-------~Vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 72 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEEGA-------NVVITGRTK--EKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQI 72 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence 5799999999999999999999887 789999864 3333333333221100 0112211112222
Q ss_pred --hcCCCcEEEEeCCCCCC-C--CCC---HHHHHHhhHHHHHHHHHHHhhh--c-CCCeEEEEEcCcchhhHHHHHHHCC
Q 020875 78 --ACTGVNIAVMVGGFPRK-E--GME---RKDVMSKNVSIYKAQASALEQH--A-APNCKVLVVANPANTNALILKEFAP 146 (320)
Q Consensus 78 --al~~aDvVi~~ag~~~~-~--~~~---r~~~~~~n~~~~~~i~~~i~~~--~-~~~~~viv~snP~~~~~~~~~~~~~ 146 (320)
.+...|+||+.+|.... + ..+ ....+..|+.....+.+.+.++ . ...+.++++|.-... .
T Consensus 73 ~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~---------~ 143 (252)
T PRK07677 73 DEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAW---------D 143 (252)
T ss_pred HHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhc---------c
Confidence 13467999999985321 1 122 2345777877777776666432 1 123667777643210 0
Q ss_pred CCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 147 ~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
..+..-.|+.++.....+.+.+|+.+.- +..++
T Consensus 144 ~~~~~~~Y~~sKaa~~~~~~~la~e~~~-~~gi~ 176 (252)
T PRK07677 144 AGPGVIHSAAAKAGVLAMTRTLAVEWGR-KYGIR 176 (252)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHhCc-ccCeE
Confidence 1111113566666556677777777642 23455
No 327
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.62 E-value=0.00069 Score=60.76 Aligned_cols=159 Identities=13% Similarity=0.068 Sum_probs=85.0
Q ss_pred CCCEEEEEcCC--ChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCcc-chhHHHHHHHhcccCCCCcceEEeCCh-----
Q 020875 4 EPVRVLVTGAA--GQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA-EALNGVKMELVDAAFPLLKGVVATTDA----- 75 (320)
Q Consensus 4 ~~~kI~IiGA~--G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~-~~~~~~~~dl~~~~~~~~~~v~~~~~~----- 75 (320)
+.+.++||||+ +.+|.+++..|++.|. .|++.++++.. +.++....++.+. .....++....+.
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-------~v~l~~r~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~v~~~~~ 80 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-------ELAVTYLNDKARPYVEPLAEELDAP-IFLPLDVREPGQLEAVFA 80 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-------EEEEEeCChhhHHHHHHHHHhhccc-eEEecCcCCHHHHHHHHH
Confidence 34688999987 4899999999999886 78888886421 1122111222110 0011122211111
Q ss_pred --hhhcCCCcEEEEeCCCCCC-----C--CCC---HHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHH
Q 020875 76 --VEACTGVNIAVMVGGFPRK-----E--GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKE 143 (320)
Q Consensus 76 --~~al~~aDvVi~~ag~~~~-----~--~~~---r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~ 143 (320)
.+.+...|++|+.||.... + ..+ ..+.+..|+.....+.+.+..+-.....++++|.....
T Consensus 81 ~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~------- 153 (258)
T PRK07533 81 RIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAE------- 153 (258)
T ss_pred HHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccc-------
Confidence 1223467999999987431 0 112 23456777766666665544432123456666643211
Q ss_pred HCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 144 ~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
...|....|+.++..-..+-+.++..++ +..|+.
T Consensus 154 --~~~~~~~~Y~asKaal~~l~~~la~el~--~~gI~V 187 (258)
T PRK07533 154 --KVVENYNLMGPVKAALESSVRYLAAELG--PKGIRV 187 (258)
T ss_pred --cCCccchhhHHHHHHHHHHHHHHHHHhh--hcCcEE
Confidence 0112112456666656666677777765 345553
No 328
>PRK06483 dihydromonapterin reductase; Provisional
Probab=97.60 E-value=0.00044 Score=60.93 Aligned_cols=147 Identities=13% Similarity=0.042 Sum_probs=80.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC-CCCcceEEeCCh-------hh
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDA-------VE 77 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~~~~-------~~ 77 (320)
++++|+||+|.+|.+++..|+++|. +|++.++++. ... .++.+... ....++....+. .+
T Consensus 3 k~vlItGas~gIG~~ia~~l~~~G~-------~V~~~~r~~~--~~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 70 (236)
T PRK06483 3 APILITGAGQRIGLALAWHLLAQGQ-------PVIVSYRTHY--PAI---DGLRQAGAQCIQADFSTNAGIMAFIDELKQ 70 (236)
T ss_pred ceEEEECCCChHHHHHHHHHHHCCC-------eEEEEeCCch--hHH---HHHHHcCCEEEEcCCCCHHHHHHHHHHHHh
Confidence 4799999999999999999999887 7889998642 111 11211110 011122111111 12
Q ss_pred hcCCCcEEEEeCCCCCC--CC-CC---HHHHHHhhHHHHHHHH----HHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCC
Q 020875 78 ACTGVNIAVMVGGFPRK--EG-ME---RKDVMSKNVSIYKAQA----SALEQHAAPNCKVLVVANPANTNALILKEFAPS 147 (320)
Q Consensus 78 al~~aDvVi~~ag~~~~--~~-~~---r~~~~~~n~~~~~~i~----~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~ 147 (320)
.+...|++|+.||.... +. .+ ..+.+..|+.....+. +.+++.....+.++++|.... . .+
T Consensus 71 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~-------~--~~ 141 (236)
T PRK06483 71 HTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVV-------E--KG 141 (236)
T ss_pred hCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhh-------c--cC
Confidence 23458999999986421 11 12 2334556666554443 444332211345666654221 1 12
Q ss_pred CCCCcEEEeehhhHHHHHHHHHHHcC
Q 020875 148 IPAKNITCLTRLDHNRALGQISEKLN 173 (320)
Q Consensus 148 ~~~~~i~~~t~ld~~r~~~~~a~~l~ 173 (320)
.+..-.|+.++..-..+-+.+++.+.
T Consensus 142 ~~~~~~Y~asKaal~~l~~~~a~e~~ 167 (236)
T PRK06483 142 SDKHIAYAASKAALDNMTLSFAAKLA 167 (236)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHC
Confidence 23223577777766777777888875
No 329
>PRK06940 short chain dehydrogenase; Provisional
Probab=97.58 E-value=0.0004 Score=63.03 Aligned_cols=116 Identities=19% Similarity=0.185 Sum_probs=67.1
Q ss_pred EEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhh-----
Q 020875 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA----- 78 (320)
Q Consensus 7 kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~a----- 78 (320)
.+.|+|| |.+|.+++..|. .|. +|++.|+++ ++++....++...... +..++....+..++
T Consensus 4 ~~lItGa-~gIG~~la~~l~-~G~-------~Vv~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~ 72 (275)
T PRK06940 4 VVVVIGA-GGIGQAIARRVG-AGK-------KVLLADYNE--ENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQ 72 (275)
T ss_pred EEEEECC-ChHHHHHHHHHh-CCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHH
Confidence 4677775 899999999986 665 899999864 3333222233221100 11122211122222
Q ss_pred -cCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcc
Q 020875 79 -CTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPA 134 (320)
Q Consensus 79 -l~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~ 134 (320)
+...|++|+.||... ...+..+.+..|+.....+++.+.+.-.++..++++++..
T Consensus 73 ~~g~id~li~nAG~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~ 128 (275)
T PRK06940 73 TLGPVTGLVHTAGVSP-SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQS 128 (275)
T ss_pred hcCCCCEEEECCCcCC-chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecc
Confidence 246899999999753 2234566788898887777777665421233455665443
No 330
>PRK06125 short chain dehydrogenase; Provisional
Probab=97.57 E-value=0.002 Score=57.55 Aligned_cols=119 Identities=18% Similarity=0.185 Sum_probs=68.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhccc-CC---CCcceEEeCCh---h
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-FP---LLKGVVATTDA---V 76 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~-~~---~~~~v~~~~~~---~ 76 (320)
+.++++|+||+|.+|.+++..|++.|. +|++.++++ ++++....++.... .. ...++....+. .
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~ 76 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-------HLHLVARDA--DALEALAADLRAAHGVDVAVHALDLSSPEAREQLA 76 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHH
Confidence 457999999999999999999999886 799999864 33333333332211 00 01122111111 2
Q ss_pred hhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHH----HHhhhcCCCeEEEEEcCc
Q 020875 77 EACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQAS----ALEQHAAPNCKVLVVANP 133 (320)
Q Consensus 77 ~al~~aDvVi~~ag~~~~~---~~~r---~~~~~~n~~~~~~i~~----~i~~~~~~~~~viv~snP 133 (320)
+.+...|++|+++|..... ..+. ...+..|+.....+.+ .+++.. ...++++|+-
T Consensus 77 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~iv~iss~ 141 (259)
T PRK06125 77 AEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG--SGVIVNVIGA 141 (259)
T ss_pred HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--CcEEEEecCc
Confidence 2345789999999874321 1122 3345667665544444 444432 3567766653
No 331
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.54 E-value=0.00045 Score=64.44 Aligned_cols=76 Identities=28% Similarity=0.307 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcc----cCCCCcceEEeCChhhhc
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA----AFPLLKGVVATTDAVEAC 79 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~----~~~~~~~v~~~~~~~~al 79 (320)
.+|||+|+| +|.+|+.++..|+..|+ +|.++++++ ++++.....-.+. ......++..+++..+++
T Consensus 3 ~~m~I~iIG-~G~mG~~ia~~L~~~G~-------~V~~~~r~~--~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~ 72 (328)
T PRK14618 3 HGMRVAVLG-AGAWGTALAVLAASKGV-------PVRLWARRP--EFAAALAAERENREYLPGVALPAELYPTADPEEAL 72 (328)
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHH
Confidence 367999999 69999999999999887 899999863 3332221110000 111122355666777888
Q ss_pred CCCcEEEEeC
Q 020875 80 TGVNIAVMVG 89 (320)
Q Consensus 80 ~~aDvVi~~a 89 (320)
+++|+||++.
T Consensus 73 ~~aD~Vi~~v 82 (328)
T PRK14618 73 AGADFAVVAV 82 (328)
T ss_pred cCCCEEEEEC
Confidence 9999999975
No 332
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.52 E-value=0.002 Score=57.79 Aligned_cols=159 Identities=11% Similarity=0.092 Sum_probs=85.2
Q ss_pred CCEEEEEcCC--ChhHHHHHHHHHhcCcCCCCCCeEEEEEecCC-ccchhHHHHHHHhccc-CCCCcceEEeCCh-----
Q 020875 5 PVRVLVTGAA--GQIGYALVPMIARGVMLGTDQPVILHMLDIPP-AAEALNGVKMELVDAA-FPLLKGVVATTDA----- 75 (320)
Q Consensus 5 ~~kI~IiGA~--G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~-~~~~~~~~~~dl~~~~-~~~~~~v~~~~~~----- 75 (320)
.+.++||||+ +-+|.+++..|++.|. .|++.+++. +.+.++....++.... .....++....+.
T Consensus 7 ~k~~lItGa~~s~GIG~aia~~la~~G~-------~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 79 (257)
T PRK08594 7 GKTYVVMGVANKRSIAWGIARSLHNAGA-------KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFE 79 (257)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCC-------EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHH
Confidence 4689999986 7999999999999986 788887642 1122222222221000 0011222222111
Q ss_pred --hhhcCCCcEEEEeCCCCCC-----C--CCCHH---HHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHH
Q 020875 76 --VEACTGVNIAVMVGGFPRK-----E--GMERK---DVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKE 143 (320)
Q Consensus 76 --~~al~~aDvVi~~ag~~~~-----~--~~~r~---~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~ 143 (320)
.+.+...|++|+.||.... + ..+.+ ..+..|......+.+.+...-.+.+.+|++|+-...
T Consensus 80 ~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~------- 152 (257)
T PRK08594 80 TIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGE------- 152 (257)
T ss_pred HHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCc-------
Confidence 1223458999999986421 1 12222 234556555444444443322134677887754321
Q ss_pred HCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 144 ~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
...|..-.|+.++.--..|-+.+|+.+. +..|+.
T Consensus 153 --~~~~~~~~Y~asKaal~~l~~~la~el~--~~gIrv 186 (257)
T PRK08594 153 --RVVQNYNVMGVAKASLEASVKYLANDLG--KDGIRV 186 (257)
T ss_pred --cCCCCCchhHHHHHHHHHHHHHHHHHhh--hcCCEE
Confidence 1122222567777777777777887765 345653
No 333
>COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism]
Probab=97.52 E-value=0.00084 Score=62.09 Aligned_cols=125 Identities=20% Similarity=0.249 Sum_probs=73.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcEE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDvV 85 (320)
|||+|+| +|.+|+-++..|.+.|. +|.++.+++..+++...-..+.+..... ..........+.+..+|+|
T Consensus 1 mkI~IlG-aGAvG~l~g~~L~~~g~-------~V~~~~R~~~~~~l~~~GL~i~~~~~~~-~~~~~~~~~~~~~~~~Dlv 71 (307)
T COG1893 1 MKILILG-AGAIGSLLGARLAKAGH-------DVTLLVRSRRLEALKKKGLRIEDEGGNF-TTPVVAATDAEALGPADLV 71 (307)
T ss_pred CeEEEEC-CcHHHHHHHHHHHhCCC-------eEEEEecHHHHHHHHhCCeEEecCCCcc-ccccccccChhhcCCCCEE
Confidence 7999999 69999999999999884 6777776531122221112222221100 1112223345667799999
Q ss_pred EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCCcE-EEeehh
Q 020875 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRL 159 (320)
Q Consensus 86 i~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~i-~~~t~l 159 (320)
|++.-. .+ ..+.++.+..+..++.+++.+-|=.+..- .+.+. +|.+++ .|.|..
T Consensus 72 iv~vKa----~q------------~~~al~~l~~~~~~~t~vl~lqNG~g~~e-~l~~~---~~~~~il~G~~~~ 126 (307)
T COG1893 72 IVTVKA----YQ------------LEEALPSLAPLLGPNTVVLFLQNGLGHEE-ELRKI---LPKETVLGGVTTH 126 (307)
T ss_pred EEEecc----cc------------HHHHHHHhhhcCCCCcEEEEEeCCCcHHH-HHHHh---CCcceEEEEEeee
Confidence 998632 11 34566777777656677888888876654 33442 444454 444433
No 334
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=97.52 E-value=0.0012 Score=58.04 Aligned_cols=117 Identities=17% Similarity=0.178 Sum_probs=64.0
Q ss_pred EEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCCh-------h
Q 020875 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDA-------V 76 (320)
Q Consensus 7 kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~-------~ 76 (320)
.++|+||+|++|++++..|+..|. ++++..+.. .+.++....++...... ...++....+. .
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~-------~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 73 (242)
T TIGR01829 2 IALVTGGMGGIGTAICQRLAKDGY-------RVAANCGPN-EERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVE 73 (242)
T ss_pred EEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCC-HHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHH
Confidence 578999999999999999999887 777776621 22222222222211100 01112111111 2
Q ss_pred hhcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHH----HHHHHhhhcCCCeEEEEEcCc
Q 020875 77 EACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKA----QASALEQHAAPNCKVLVVANP 133 (320)
Q Consensus 77 ~al~~aDvVi~~ag~~~~~---~~~---r~~~~~~n~~~~~~----i~~~i~~~~~~~~~viv~snP 133 (320)
+.+...|+||+.+|..... ..+ ..+.+..|...... +.+.+++.. ..+++++|..
T Consensus 74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~iss~ 138 (242)
T TIGR01829 74 AELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG--WGRIINISSV 138 (242)
T ss_pred HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CcEEEEEcch
Confidence 2234689999999865321 111 23345667765444 444444442 3567777754
No 335
>PRK07831 short chain dehydrogenase; Provisional
Probab=97.52 E-value=0.0011 Score=59.49 Aligned_cols=156 Identities=15% Similarity=0.028 Sum_probs=83.9
Q ss_pred CCEEEEEcCCC-hhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC--C---CCcceEEeCChhhh
Q 020875 5 PVRVLVTGAAG-QIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF--P---LLKGVVATTDAVEA 78 (320)
Q Consensus 5 ~~kI~IiGA~G-~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~--~---~~~~v~~~~~~~~a 78 (320)
.++++||||+| .+|.+++..|+..|. +|++.|++. ++++....++..... . ...++....+..++
T Consensus 17 ~k~vlItG~sg~gIG~~ia~~l~~~G~-------~V~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 87 (262)
T PRK07831 17 GKVVLVTAAAGTGIGSATARRALEEGA-------RVVISDIHE--RRLGETADELAAELGLGRVEAVVCDVTSEAQVDAL 87 (262)
T ss_pred CCEEEEECCCcccHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHH
Confidence 36899999887 599999999999887 788888763 333333333322100 0 01122111112222
Q ss_pred -------cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHh----hhcCCCeEEEEEcCcchhhHHHH
Q 020875 79 -------CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALE----QHAAPNCKVLVVANPANTNALIL 141 (320)
Q Consensus 79 -------l~~aDvVi~~ag~~~~~---~~~---r~~~~~~n~~~~~~i~~~i~----~~~~~~~~viv~snP~~~~~~~~ 141 (320)
+...|++|+.+|..... ..+ ..+.+..|+.....+++.+. +.. ....+++++.....
T Consensus 88 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~iv~~ss~~~~----- 161 (262)
T PRK07831 88 IDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARG-HGGVIVNNASVLGW----- 161 (262)
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCcEEEEeCchhhc-----
Confidence 24679999999864311 111 22345566665555444433 321 13556665543211
Q ss_pred HHHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 142 ~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
...+..-.|+.++.-...+-+.+|..+. +..|+.
T Consensus 162 ----~~~~~~~~Y~~sKaal~~~~~~la~e~~--~~gI~v 195 (262)
T PRK07831 162 ----RAQHGQAHYAAAKAGVMALTRCSALEAA--EYGVRI 195 (262)
T ss_pred ----CCCCCCcchHHHHHHHHHHHHHHHHHhC--ccCeEE
Confidence 1122223567666666667666777654 445653
No 336
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=97.51 E-value=0.0043 Score=55.78 Aligned_cols=158 Identities=12% Similarity=0.069 Sum_probs=84.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhccc-CC---CCcceEEeCCh----h-
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-FP---LLKGVVATTDA----V- 76 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~-~~---~~~~v~~~~~~----~- 76 (320)
..++||||+|.+|.+++..|++.|. +|++.+++. .+.++....++.+.. .. +..++....+. .
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~-------~V~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~ 73 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGY-------RVVLHYHRS-AAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEA 73 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCC-------eEEEEcCCc-HHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHH
Confidence 3688999999999999999999887 787765432 233443333443211 00 11223222111 1
Q ss_pred ------hhcCCCcEEEEeCCCCCC------CCCC-----------HHHHHHhhHHHHHHHHHHHhhhc--------CCCe
Q 020875 77 ------EACTGVNIAVMVGGFPRK------EGME-----------RKDVMSKNVSIYKAQASALEQHA--------APNC 125 (320)
Q Consensus 77 ------~al~~aDvVi~~ag~~~~------~~~~-----------r~~~~~~n~~~~~~i~~~i~~~~--------~~~~ 125 (320)
+.+...|+||+.||.... +..+ ..+.+..|+.....+.+.+.+.- ....
T Consensus 74 ~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~ 153 (267)
T TIGR02685 74 IIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNL 153 (267)
T ss_pred HHHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCe
Confidence 123468999999986321 1111 23456777665555554433221 0123
Q ss_pred EEEEEcCcchhhHHHHHHHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeee
Q 020875 126 KVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182 (320)
Q Consensus 126 ~viv~snP~~~~~~~~~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~ 182 (320)
.++++++.... ...+..-.|+.++.-...+...++..++ +..|+..
T Consensus 154 ~iv~~~s~~~~---------~~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~v~ 199 (267)
T TIGR02685 154 SIVNLCDAMTD---------QPLLGFTMYTMAKHALEGLTRSAALELA--PLQIRVN 199 (267)
T ss_pred EEEEehhhhcc---------CCCcccchhHHHHHHHHHHHHHHHHHHh--hhCeEEE
Confidence 45555543211 1122223567777666667777777764 4556644
No 337
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.51 E-value=0.0018 Score=59.07 Aligned_cols=71 Identities=20% Similarity=0.189 Sum_probs=47.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDv 84 (320)
.|||+++| +|.+|++++..|+..+... ..++.++|++. .++++. +.... .+....+..++++++|+
T Consensus 3 ~mkI~~IG-~G~mG~aia~~l~~~g~~~---~~~v~v~~r~~-~~~~~~----l~~~~-----g~~~~~~~~e~~~~aDv 68 (279)
T PRK07679 3 IQNISFLG-AGSIAEAIIGGLLHANVVK---GEQITVSNRSN-ETRLQE----LHQKY-----GVKGTHNKKELLTDANI 68 (279)
T ss_pred CCEEEEEC-ccHHHHHHHHHHHHCCCCC---cceEEEECCCC-HHHHHH----HHHhc-----CceEeCCHHHHHhcCCE
Confidence 36999999 6999999999999887321 12788888753 122222 22110 12334466677889999
Q ss_pred EEEeC
Q 020875 85 AVMVG 89 (320)
Q Consensus 85 Vi~~a 89 (320)
||++.
T Consensus 69 Vilav 73 (279)
T PRK07679 69 LFLAM 73 (279)
T ss_pred EEEEe
Confidence 99985
No 338
>PRK07680 late competence protein ComER; Validated
Probab=97.51 E-value=0.0013 Score=59.79 Aligned_cols=100 Identities=13% Similarity=0.215 Sum_probs=62.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcEE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDvV 85 (320)
|||+|+| +|.+|++++..|.+.+... ..++.++|++. ++++. +.+.. ..+....+..+.++++|+|
T Consensus 1 m~I~iIG-~G~mG~ala~~L~~~g~~~---~~~v~v~~r~~--~~~~~----~~~~~----~g~~~~~~~~~~~~~aDiV 66 (273)
T PRK07680 1 MNIGFIG-TGNMGTILIEAFLESGAVK---PSQLTITNRTP--AKAYH----IKERY----PGIHVAKTIEEVISQSDLI 66 (273)
T ss_pred CEEEEEC-ccHHHHHHHHHHHHCCCCC---cceEEEECCCH--HHHHH----HHHHc----CCeEEECCHHHHHHhCCEE
Confidence 5899999 6999999999999887421 12688999863 33322 21110 1234445666778999999
Q ss_pred EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcch
Q 020875 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN 135 (320)
Q Consensus 86 i~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~ 135 (320)
|++.- | ..+.++++.+..+-.++..+|.++|.+.
T Consensus 67 ilav~-p---------------~~~~~vl~~l~~~l~~~~~iis~~ag~~ 100 (273)
T PRK07680 67 FICVK-P---------------LDIYPLLQKLAPHLTDEHCLVSITSPIS 100 (273)
T ss_pred EEecC-H---------------HHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence 99861 1 1123444455444324556777888763
No 339
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.50 E-value=0.0012 Score=59.68 Aligned_cols=155 Identities=14% Similarity=0.153 Sum_probs=85.0
Q ss_pred CEEEEEcCCC--hhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcc-c--CCCCcceEEeCCh-----
Q 020875 6 VRVLVTGAAG--QIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-A--FPLLKGVVATTDA----- 75 (320)
Q Consensus 6 ~kI~IiGA~G--~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~-~--~~~~~~v~~~~~~----- 75 (320)
+.++||||++ .||.+++..|++.|. .|++.++++ +..+ ...++.+. . .....++....+.
T Consensus 8 k~~lVTGas~~~GIG~aiA~~la~~Ga-------~V~~~~r~~--~~~~-~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~ 77 (271)
T PRK06505 8 KRGLIMGVANDHSIAWGIAKQLAAQGA-------ELAFTYQGE--ALGK-RVKPLAESLGSDFVLPCDVEDIASVDAVFE 77 (271)
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHhCCC-------EEEEecCch--HHHH-HHHHHHHhcCCceEEeCCCCCHHHHHHHHH
Confidence 5789999875 899999999999987 788888753 1111 11122111 0 0011222221111
Q ss_pred --hhhcCCCcEEEEeCCCCCC-----C--CCCH---HHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHH
Q 020875 76 --VEACTGVNIAVMVGGFPRK-----E--GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKE 143 (320)
Q Consensus 76 --~~al~~aDvVi~~ag~~~~-----~--~~~r---~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~ 143 (320)
.+.+...|++|+.||.... + ..+. ...+..|+.....+.+.+..+-...+.+|++|+....
T Consensus 78 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~------- 150 (271)
T PRK06505 78 ALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGST------- 150 (271)
T ss_pred HHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCcc-------
Confidence 1223468999999987431 1 1222 2345667665555544443321123567777653321
Q ss_pred HCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 144 ~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
...|..-.|+.++.-...+-+.+|..+. +..|+.
T Consensus 151 --~~~~~~~~Y~asKaAl~~l~r~la~el~--~~gIrV 184 (271)
T PRK06505 151 --RVMPNYNVMGVAKAALEASVRYLAADYG--PQGIRV 184 (271)
T ss_pred --ccCCccchhhhhHHHHHHHHHHHHHHHh--hcCeEE
Confidence 1122223567777777777778888864 455653
No 340
>PRK07201 short chain dehydrogenase; Provisional
Probab=97.48 E-value=0.0011 Score=67.60 Aligned_cols=148 Identities=14% Similarity=0.073 Sum_probs=81.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhhc--
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEAC-- 79 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~al-- 79 (320)
.++++|+||+|.+|.+++..|+++|. +|+++++++ +.++....++...... ...++....+..+++
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~ 441 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGA-------TVFLVARNG--EALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKD 441 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence 35899999999999999999999886 899999864 3333333333221110 011222222223333
Q ss_pred -----CCCcEEEEeCCCCCCCC--------CCHHHHHHhhHHHHHHHHH----HHhhhcCCCeEEEEEcCcchhhHHHHH
Q 020875 80 -----TGVNIAVMVGGFPRKEG--------MERKDVMSKNVSIYKAQAS----ALEQHAAPNCKVLVVANPANTNALILK 142 (320)
Q Consensus 80 -----~~aDvVi~~ag~~~~~~--------~~r~~~~~~n~~~~~~i~~----~i~~~~~~~~~viv~snP~~~~~~~~~ 142 (320)
...|++|+.||...... ++....+..|+.....+.+ .+++.+ ...+|++|+-...
T Consensus 442 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~g~iv~isS~~~~------ 513 (657)
T PRK07201 442 ILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR--FGHVVNVSSIGVQ------ 513 (657)
T ss_pred HHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC--CCEEEEECChhhc------
Confidence 36899999998642111 1123456677766555544 444432 3567777753211
Q ss_pred HHCCCCCCCcEEEeehhhHHHHHHHHHHHc
Q 020875 143 EFAPSIPAKNITCLTRLDHNRALGQISEKL 172 (320)
Q Consensus 143 ~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l 172 (320)
.+.|..-.|+.++.....+...++..+
T Consensus 514 ---~~~~~~~~Y~~sK~a~~~~~~~la~e~ 540 (657)
T PRK07201 514 ---TNAPRFSAYVASKAALDAFSDVAASET 540 (657)
T ss_pred ---CCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 112221235555555555555566554
No 341
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=97.48 E-value=0.0012 Score=60.07 Aligned_cols=65 Identities=11% Similarity=0.085 Sum_probs=44.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcEE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDvV 85 (320)
|||+|+| .|.+|..++..|...|+ +|.++|+++ +.++ ...+. .. +....+..++++++|+|
T Consensus 1 m~I~IIG-~G~mG~sla~~L~~~g~-------~V~~~d~~~--~~~~-~a~~~--g~------~~~~~~~~~~~~~aDlV 61 (279)
T PRK07417 1 MKIGIVG-LGLIGGSLGLDLRSLGH-------TVYGVSRRE--STCE-RAIER--GL------VDEASTDLSLLKDCDLV 61 (279)
T ss_pred CeEEEEe-ecHHHHHHHHHHHHCCC-------EEEEEECCH--HHHH-HHHHC--CC------cccccCCHhHhcCCCEE
Confidence 5899999 79999999999998886 899999863 2222 11111 10 11111223568999999
Q ss_pred EEeC
Q 020875 86 VMVG 89 (320)
Q Consensus 86 i~~a 89 (320)
|++.
T Consensus 62 ilav 65 (279)
T PRK07417 62 ILAL 65 (279)
T ss_pred EEcC
Confidence 9985
No 342
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.47 E-value=0.001 Score=59.37 Aligned_cols=160 Identities=13% Similarity=0.122 Sum_probs=85.3
Q ss_pred CCCC--CCEEEEEcCC--ChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC-CCCcceEEeCCh
Q 020875 1 MAKE--PVRVLVTGAA--GQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDA 75 (320)
Q Consensus 1 m~~~--~~kI~IiGA~--G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~~~~ 75 (320)
|+++ .+.++||||+ +.||..++..|++.|. +|++.++++ ++.....++..... .+..++....+.
T Consensus 1 ~~~~l~~k~~lItGas~~~gIG~a~a~~la~~G~-------~Vi~~~r~~---~~~~~~~~~~~~~~~~~~~Dl~~~~~v 70 (252)
T PRK06079 1 MSGILSGKKIVVMGVANKRSIAWGCAQAIKDQGA-------TVIYTYQND---RMKKSLQKLVDEEDLLVECDVASDESI 70 (252)
T ss_pred CccccCCCEEEEeCCCCCCchHHHHHHHHHHCCC-------EEEEecCch---HHHHHHHhhccCceeEEeCCCCCHHHH
Confidence 4444 3689999987 6899999999999987 788888752 22222222221110 111222221111
Q ss_pred -------hhhcCCCcEEEEeCCCCCC-----C--CCCH---HHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhH
Q 020875 76 -------VEACTGVNIAVMVGGFPRK-----E--GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA 138 (320)
Q Consensus 76 -------~~al~~aDvVi~~ag~~~~-----~--~~~r---~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~ 138 (320)
.+.+...|++|+.||.... + ..+. ...+..|+.....+.+.+...-...+++|++|.-...
T Consensus 71 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~-- 148 (252)
T PRK06079 71 ERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSE-- 148 (252)
T ss_pred HHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCcc--
Confidence 1223458999999986431 1 1122 2345566655544444444332123567777642211
Q ss_pred HHHHHHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 139 LILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 139 ~~~~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
...|..-.|+.++.--..+-+.+|..+. +..|+.
T Consensus 149 -------~~~~~~~~Y~asKaal~~l~~~la~el~--~~gI~v 182 (252)
T PRK06079 149 -------RAIPNYNVMGIAKAALESSVRYLARDLG--KKGIRV 182 (252)
T ss_pred -------ccCCcchhhHHHHHHHHHHHHHHHHHhh--hcCcEE
Confidence 1122112456666666677777777764 445653
No 343
>PRK08017 oxidoreductase; Provisional
Probab=97.46 E-value=0.00085 Score=59.66 Aligned_cols=151 Identities=14% Similarity=0.126 Sum_probs=79.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC-CCCcceEEeCChhh---hc--
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVE---AC-- 79 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~~~~~~---al-- 79 (320)
++|+|+||+|++|.+++..|+++|. +|++++++. ++++. +.+... ....++....+..+ .+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-------~v~~~~r~~--~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~i~~ 69 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-------RVLAACRKP--DDVAR----MNSLGFTGILLDLDDPESVERAADEVIA 69 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHhHH----HHhCCCeEEEeecCCHHHHHHHHHHHHH
Confidence 4799999999999999999998886 788888763 22221 111100 00111111111111 11
Q ss_pred ---CCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHH----HHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCC
Q 020875 80 ---TGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQ----ASALEQHAAPNCKVLVVANPANTNALILKEFAP 146 (320)
Q Consensus 80 ---~~aDvVi~~ag~~~~~---~~~---r~~~~~~n~~~~~~i----~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~ 146 (320)
...|.+|+.+|..... ..+ ..+.+..|+.....+ ++.+++.. . ..++++++-... .
T Consensus 70 ~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~-~~iv~~ss~~~~---------~ 138 (256)
T PRK08017 70 LTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG-E-GRIVMTSSVMGL---------I 138 (256)
T ss_pred hcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-C-CEEEEEcCcccc---------c
Confidence 3578999998864311 112 234567777655544 55555543 2 456666643211 1
Q ss_pred CCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeee
Q 020875 147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182 (320)
Q Consensus 147 ~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~ 182 (320)
+.+....|+.++.....+...++..+. +..++..
T Consensus 139 ~~~~~~~Y~~sK~~~~~~~~~l~~~~~--~~~i~v~ 172 (256)
T PRK08017 139 STPGRGAYAASKYALEAWSDALRMELR--HSGIKVS 172 (256)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHh--hcCCEEE
Confidence 122222456665555555444544433 3345543
No 344
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.46 E-value=0.0013 Score=59.38 Aligned_cols=69 Identities=22% Similarity=0.264 Sum_probs=46.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDv 84 (320)
+|||+|+| +|.+|+.++..|.+.+.. ..++.++|+++ ++++. +.+.. .+....+..+.++++|+
T Consensus 2 mm~I~iIG-~G~mG~~la~~l~~~g~~----~~~v~v~~r~~--~~~~~----~~~~~-----g~~~~~~~~~~~~~adv 65 (267)
T PRK11880 2 MKKIGFIG-GGNMASAIIGGLLASGVP----AKDIIVSDPSP--EKRAA----LAEEY-----GVRAATDNQEAAQEADV 65 (267)
T ss_pred CCEEEEEe-chHHHHHHHHHHHhCCCC----cceEEEEcCCH--HHHHH----HHHhc-----CCeecCChHHHHhcCCE
Confidence 57999999 699999999999887731 12688999863 33221 21110 12233455667889999
Q ss_pred EEEeC
Q 020875 85 AVMVG 89 (320)
Q Consensus 85 Vi~~a 89 (320)
||++.
T Consensus 66 Vil~v 70 (267)
T PRK11880 66 VVLAV 70 (267)
T ss_pred EEEEc
Confidence 99985
No 345
>PRK07791 short chain dehydrogenase; Provisional
Probab=97.46 E-value=0.0017 Score=59.30 Aligned_cols=159 Identities=19% Similarity=0.125 Sum_probs=84.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCC-------ccchhHHHHHHHhcccCC---CCcceEEeCC
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP-------AAEALNGVKMELVDAAFP---LLKGVVATTD 74 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~-------~~~~~~~~~~dl~~~~~~---~~~~v~~~~~ 74 (320)
.+.+.||||++.||.+++..|++.|. .|++.+++. ..+.+.....++...... ...++....+
T Consensus 6 ~k~~lITGas~GIG~aia~~la~~G~-------~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~ 78 (286)
T PRK07791 6 GRVVIVTGAGGGIGRAHALAFAAEGA-------RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDG 78 (286)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHH
Confidence 46899999999999999999999886 788888653 012233333333221111 1112222111
Q ss_pred h-------hhhcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHH----hhhcC----CCeEEEEEcCc
Q 020875 75 A-------VEACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASAL----EQHAA----PNCKVLVVANP 133 (320)
Q Consensus 75 ~-------~~al~~aDvVi~~ag~~~~~---~~~---r~~~~~~n~~~~~~i~~~i----~~~~~----~~~~viv~snP 133 (320)
. .+.+...|++|+.||..... ..+ ....+..|+.....+.+.+ .+... .++.+|++|+.
T Consensus 79 v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~ 158 (286)
T PRK07791 79 AANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSG 158 (286)
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCch
Confidence 1 12235679999999975321 112 2345667776655444443 32210 13567777754
Q ss_pred chhhHHHHHHHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 134 ANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
... .+.+..-.|+.++--...+-+.+|..++ +..|+.
T Consensus 159 ~~~---------~~~~~~~~Y~asKaal~~l~~~la~el~--~~gIrV 195 (286)
T PRK07791 159 AGL---------QGSVGQGNYSAAKAGIAALTLVAAAELG--RYGVTV 195 (286)
T ss_pred hhC---------cCCCCchhhHHHHHHHHHHHHHHHHHHH--HhCeEE
Confidence 321 1122112455555544455556666654 345663
No 346
>PRK06928 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.46 E-value=0.0021 Score=58.58 Aligned_cols=101 Identities=13% Similarity=0.092 Sum_probs=60.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDv 84 (320)
|+||+|+| +|.+|++++..|.+.+... ..+|.+++++. .++++. +.... ..+..+.+..++++++|+
T Consensus 1 m~~I~iIG-~G~mG~ala~~L~~~g~~~---~~~V~~~~r~~-~~~~~~----l~~~~----~~~~~~~~~~e~~~~aDv 67 (277)
T PRK06928 1 MEKIGFIG-YGSMADMIATKLLETEVAT---PEEIILYSSSK-NEHFNQ----LYDKY----PTVELADNEAEIFTKCDH 67 (277)
T ss_pred CCEEEEEC-ccHHHHHHHHHHHHCCCCC---cccEEEEeCCc-HHHHHH----HHHHc----CCeEEeCCHHHHHhhCCE
Confidence 36899999 6999999999999877321 12788888753 122221 11110 123344566677899999
Q ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcc
Q 020875 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPA 134 (320)
Q Consensus 85 Vi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~ 134 (320)
||++... ..+.++++.+..+-.++..+|.+.+-+
T Consensus 68 Vilavpp----------------~~~~~vl~~l~~~l~~~~~ivS~~aGi 101 (277)
T PRK06928 68 SFICVPP----------------LAVLPLLKDCAPVLTPDRHVVSIAAGV 101 (277)
T ss_pred EEEecCH----------------HHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 9987531 123455555554432344566666654
No 347
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=97.44 E-value=0.0021 Score=59.42 Aligned_cols=74 Identities=28% Similarity=0.262 Sum_probs=49.6
Q ss_pred CCCCC-CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhc
Q 020875 1 MAKEP-VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC 79 (320)
Q Consensus 1 m~~~~-~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al 79 (320)
|+..+ +||+|+| +|.+|..++..|...|+. .+|.++|+++ +.++ ..... . .......+..+++
T Consensus 1 ~~~~~~~~I~IIG-~G~mG~sla~~l~~~g~~-----~~V~~~dr~~--~~~~-~a~~~---g----~~~~~~~~~~~~~ 64 (307)
T PRK07502 1 MSAPLFDRVALIG-IGLIGSSLARAIRRLGLA-----GEIVGADRSA--ETRA-RAREL---G----LGDRVTTSAAEAV 64 (307)
T ss_pred CCccCCcEEEEEe-eCHHHHHHHHHHHhcCCC-----cEEEEEECCH--HHHH-HHHhC---C----CCceecCCHHHHh
Confidence 66654 7999999 699999999999987752 2789999864 2222 11111 1 0111223556778
Q ss_pred CCCcEEEEeCC
Q 020875 80 TGVNIAVMVGG 90 (320)
Q Consensus 80 ~~aDvVi~~ag 90 (320)
+++|+||++..
T Consensus 65 ~~aDvViiavp 75 (307)
T PRK07502 65 KGADLVILCVP 75 (307)
T ss_pred cCCCEEEECCC
Confidence 99999999863
No 348
>PRK07041 short chain dehydrogenase; Provisional
Probab=97.43 E-value=0.00046 Score=60.41 Aligned_cols=112 Identities=16% Similarity=0.094 Sum_probs=65.0
Q ss_pred EEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhccc-C-CCCcceEEeCChhhhc---CCCc
Q 020875 9 LVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-F-PLLKGVVATTDAVEAC---TGVN 83 (320)
Q Consensus 9 ~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~-~-~~~~~v~~~~~~~~al---~~aD 83 (320)
.|+||+|++|++++..|+++|. +|++.++++ +++.....++.... . ....++....+..+++ ...|
T Consensus 1 lItGas~~iG~~~a~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id 71 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGA-------RVTIASRSR--DRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFD 71 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCC
Confidence 4899999999999999999986 799999863 33333223332110 0 0111222222233333 3479
Q ss_pred EEEEeCCCCCCCC------CCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEc
Q 020875 84 IAVMVGGFPRKEG------MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA 131 (320)
Q Consensus 84 vVi~~ag~~~~~~------~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~s 131 (320)
++|+.+|...... ....+.+..|+.....+.+.. ... ....+|++|
T Consensus 72 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-~~~-~~g~iv~~s 123 (230)
T PRK07041 72 HVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAA-RIA-PGGSLTFVS 123 (230)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhh-hhc-CCeEEEEEC
Confidence 9999998643211 113345677877777777733 222 335666665
No 349
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=97.42 E-value=0.00056 Score=56.13 Aligned_cols=120 Identities=14% Similarity=0.235 Sum_probs=70.0
Q ss_pred EEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHH---HHHhcccCCCCcceE-EeCChhhhcCCCc
Q 020875 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVK---MELVDAAFPLLKGVV-ATTDAVEACTGVN 83 (320)
Q Consensus 8 I~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~---~dl~~~~~~~~~~v~-~~~~~~~al~~aD 83 (320)
|+|+| +|.+|..++..|.+.++ +|.++++.+ .++... ..+.+.......... ......+....+|
T Consensus 1 I~I~G-~GaiG~~~a~~L~~~g~-------~V~l~~r~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 69 (151)
T PF02558_consen 1 ILIIG-AGAIGSLYAARLAQAGH-------DVTLVSRSP---RLEAIKEQGLTITGPDGDETVQPPIVISAPSADAGPYD 69 (151)
T ss_dssp EEEES-TSHHHHHHHHHHHHTTC-------EEEEEESHH---HHHHHHHHCEEEEETTEEEEEEEEEEESSHGHHHSTES
T ss_pred CEEEC-cCHHHHHHHHHHHHCCC-------ceEEEEccc---cHHhhhheeEEEEecccceecccccccCcchhccCCCc
Confidence 78999 59999999999999887 899999852 222211 111111100000111 1122224678999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCCcE-EEeeh
Q 020875 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTR 158 (320)
Q Consensus 84 vVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~i-~~~t~ 158 (320)
+||++.-.. ...+.++.++.+..++..++.+-|=.+..-.+ .++ +|+.++ .+.+.
T Consensus 70 ~viv~vKa~----------------~~~~~l~~l~~~~~~~t~iv~~qNG~g~~~~l-~~~---~~~~~v~~g~~~ 125 (151)
T PF02558_consen 70 LVIVAVKAY----------------QLEQALQSLKPYLDPNTTIVSLQNGMGNEEVL-AEY---FPRPRVLGGVTT 125 (151)
T ss_dssp EEEE-SSGG----------------GHHHHHHHHCTGEETTEEEEEESSSSSHHHHH-HCH---STGSGEEEEEEE
T ss_pred EEEEEeccc----------------chHHHHHHHhhccCCCcEEEEEeCCCCcHHHH-HHH---cCCCcEEEEEEe
Confidence 999985211 12456677778776777788888977655433 332 455565 44444
No 350
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.41 E-value=0.0012 Score=59.64 Aligned_cols=155 Identities=19% Similarity=0.189 Sum_probs=84.1
Q ss_pred CEEEEEcCCC--hhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC---CCCcceEEeCChhh---
Q 020875 6 VRVLVTGAAG--QIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF---PLLKGVVATTDAVE--- 77 (320)
Q Consensus 6 ~kI~IiGA~G--~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~---~~~~~v~~~~~~~~--- 77 (320)
+.++||||++ .||.+++..|++.|. .|++.+++. ++.....++..... .+..++....+..+
T Consensus 7 k~~lITGas~~~GIG~aia~~la~~G~-------~vil~~r~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~ 76 (262)
T PRK07984 7 KRILVTGVASKLSIAYGIAQAMHREGA-------ELAFTYQND---KLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFA 76 (262)
T ss_pred CEEEEeCCCCCccHHHHHHHHHHHCCC-------EEEEEecch---hHHHHHHHHHhccCCceEeecCCCCHHHHHHHHH
Confidence 5788999864 799999999999987 788888752 22222223322110 11122222222221
Q ss_pred ----hcCCCcEEEEeCCCCCCC--------CCCHH---HHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHH
Q 020875 78 ----ACTGVNIAVMVGGFPRKE--------GMERK---DVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK 142 (320)
Q Consensus 78 ----al~~aDvVi~~ag~~~~~--------~~~r~---~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~ 142 (320)
.+...|++|+.||+.... ..+.+ ..+..|+.....+.+.+...-.++..++++|+-...
T Consensus 77 ~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~------ 150 (262)
T PRK07984 77 ELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAE------ 150 (262)
T ss_pred HHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCC------
Confidence 233579999999864211 11222 345567655444444443321133567777643210
Q ss_pred HHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 143 ~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
...|..-.|+.++.--..+-+.+|..+. +.+|+.
T Consensus 151 ---~~~~~~~~Y~asKaal~~l~~~la~el~--~~gIrV 184 (262)
T PRK07984 151 ---RAIPNYNVMGLAKASLEANVRYMANAMG--PEGVRV 184 (262)
T ss_pred ---CCCCCcchhHHHHHHHHHHHHHHHHHhc--ccCcEE
Confidence 1122222467777767777777888765 456663
No 351
>PLN02688 pyrroline-5-carboxylate reductase
Probab=97.40 E-value=0.0024 Score=57.65 Aligned_cols=68 Identities=18% Similarity=0.273 Sum_probs=46.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEE-ecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHML-DIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~-D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDv 84 (320)
|||+++| .|.+|++++..|++.++.. ..+|+++ |+++ ++++ .+.+. .+....+..++++++|+
T Consensus 1 ~kI~~IG-~G~mG~a~a~~L~~~g~~~---~~~i~v~~~r~~--~~~~----~~~~~------g~~~~~~~~e~~~~aDv 64 (266)
T PLN02688 1 FRVGFIG-AGKMAEAIARGLVASGVVP---PSRISTADDSNP--ARRD----VFQSL------GVKTAASNTEVVKSSDV 64 (266)
T ss_pred CeEEEEC-CcHHHHHHHHHHHHCCCCC---cceEEEEeCCCH--HHHH----HHHHc------CCEEeCChHHHHhcCCE
Confidence 6899999 7999999999999887531 1367788 7653 3322 12211 23334456677889999
Q ss_pred EEEeC
Q 020875 85 AVMVG 89 (320)
Q Consensus 85 Vi~~a 89 (320)
||++.
T Consensus 65 Vil~v 69 (266)
T PLN02688 65 IILAV 69 (266)
T ss_pred EEEEE
Confidence 99986
No 352
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.39 E-value=0.0035 Score=56.26 Aligned_cols=155 Identities=11% Similarity=0.115 Sum_probs=86.2
Q ss_pred CEEEEEcCCC--hhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcc-cCC--CCcceEEeCCh-----
Q 020875 6 VRVLVTGAAG--QIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-AFP--LLKGVVATTDA----- 75 (320)
Q Consensus 6 ~kI~IiGA~G--~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~-~~~--~~~~v~~~~~~----- 75 (320)
+.++||||++ -+|.+++..|++.|. .|++.++++ .......++... ... ...++....+.
T Consensus 9 k~~lITGas~~~GIG~a~a~~la~~G~-------~v~~~~r~~---~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~ 78 (260)
T PRK06603 9 KKGLITGIANNMSISWAIAQLAKKHGA-------ELWFTYQSE---VLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFD 78 (260)
T ss_pred cEEEEECCCCCcchHHHHHHHHHHcCC-------EEEEEeCch---HHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHH
Confidence 4689999876 699999999999886 788888652 111122223211 100 01122221111
Q ss_pred --hhhcCCCcEEEEeCCCCCC-----C--CCC---HHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHH
Q 020875 76 --VEACTGVNIAVMVGGFPRK-----E--GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKE 143 (320)
Q Consensus 76 --~~al~~aDvVi~~ag~~~~-----~--~~~---r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~ 143 (320)
.+.+...|++|+.+|.... + ..+ ....+..|+.....+.+.....-...+++|++++....
T Consensus 79 ~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~------- 151 (260)
T PRK06603 79 DIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAE------- 151 (260)
T ss_pred HHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccc-------
Confidence 1224568999999886421 1 112 23355667666555555443322123677777754321
Q ss_pred HCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 144 ~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
.+.|..-.|+.++.-...|-+.+|..+. +..|+.
T Consensus 152 --~~~~~~~~Y~asKaal~~l~~~la~el~--~~gIrV 185 (260)
T PRK06603 152 --KVIPNYNVMGVAKAALEASVKYLANDMG--ENNIRV 185 (260)
T ss_pred --cCCCcccchhhHHHHHHHHHHHHHHHhh--hcCeEE
Confidence 1223223577777777778888888775 455663
No 353
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=97.38 E-value=0.00096 Score=58.85 Aligned_cols=118 Identities=18% Similarity=0.147 Sum_probs=62.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEE-EecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhh---
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHM-LDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA--- 78 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l-~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~a--- 78 (320)
..+.|+||+|++|++++..|++.|+ +|++ +++++ ++......++...... ...++....+..++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~-------~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~ 72 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGY-------TVAVNYQQNL--HAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTA 72 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCCh--HHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHH
Confidence 3799999999999999999999886 6665 34432 3333222333221100 11122222222222
Q ss_pred ----cCCCcEEEEeCCCCCCC----CCC---HHHHHHhhHHHHHHHHHHHhhh-----cCCCeEEEEEcC
Q 020875 79 ----CTGVNIAVMVGGFPRKE----GME---RKDVMSKNVSIYKAQASALEQH-----AAPNCKVLVVAN 132 (320)
Q Consensus 79 ----l~~aDvVi~~ag~~~~~----~~~---r~~~~~~n~~~~~~i~~~i~~~-----~~~~~~viv~sn 132 (320)
....|+||+.+|..... ..+ ....+..|+.....+.+.+... +.....+|++|+
T Consensus 73 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS 142 (247)
T PRK09730 73 IDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSS 142 (247)
T ss_pred HHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECc
Confidence 33568999999864211 112 2245667776665444433222 111245676664
No 354
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=97.36 E-value=0.00078 Score=74.46 Aligned_cols=176 Identities=11% Similarity=0.060 Sum_probs=92.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchh-HHHHHHHhccc----------CCCCcceEE-
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEAL-NGVKMELVDAA----------FPLLKGVVA- 71 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~-~~~~~dl~~~~----------~~~~~~v~~- 71 (320)
++++|.||||+||+|++++..|+..+-. ...+|+...+..+.... +.....+.+.. .....++..
T Consensus 970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~---~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~ 1046 (1389)
T TIGR03443 970 TPITVFLTGATGFLGSFILRDLLTRRSN---SNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKE 1046 (1389)
T ss_pred CCceEEEeCCccccHHHHHHHHHhcCCC---CCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCc
Confidence 3579999999999999999999876510 00266666664321111 10000000000 000111110
Q ss_pred ----e-CChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhH--H-----
Q 020875 72 ----T-TDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA--L----- 139 (320)
Q Consensus 72 ----~-~~~~~al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~--~----- 139 (320)
. ..+.+...++|+|||+|+... ......++...|+..+.++++.+.+.. . .+++.+|. ..+.. .
T Consensus 1047 ~lgl~~~~~~~l~~~~d~iiH~Aa~~~-~~~~~~~~~~~nv~gt~~ll~~a~~~~-~-~~~v~vSS-~~v~~~~~~~~~~ 1122 (1389)
T TIGR03443 1047 KFGLSDEKWSDLTNEVDVIIHNGALVH-WVYPYSKLRDANVIGTINVLNLCAEGK-A-KQFSFVSS-TSALDTEYYVNLS 1122 (1389)
T ss_pred cCCcCHHHHHHHHhcCCEEEECCcEec-CccCHHHHHHhHHHHHHHHHHHHHhCC-C-ceEEEEeC-eeecCcccccchh
Confidence 0 112344568999999987543 223344555679999999999998764 2 24555553 21110 0
Q ss_pred --HHHHHCCCCCC-----------CcEEEeehhhHHHHHHHHHHHcCCCCCCeeeeEEEcC
Q 020875 140 --ILKEFAPSIPA-----------KNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGN 187 (320)
Q Consensus 140 --~~~~~~~~~~~-----------~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G~ 187 (320)
....-..+++. ..-|+.++.-..++....++ .|++..-+|...|+|.
T Consensus 1123 ~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~-~g~~~~i~Rpg~v~G~ 1182 (1389)
T TIGR03443 1123 DELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK-RGLRGCIVRPGYVTGD 1182 (1389)
T ss_pred hhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh-CCCCEEEECCCccccC
Confidence 00000001111 11256666666666555544 4887777776667774
No 355
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=97.34 E-value=0.001 Score=61.64 Aligned_cols=119 Identities=11% Similarity=-0.002 Sum_probs=67.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcC-cCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCC---CcceEEeCChh-----
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGV-MLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAV----- 76 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~-~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~---~~~v~~~~~~~----- 76 (320)
+.++||||++.+|.+++..|+.+| . .|++.++++ ++++....++....... ..++....+..
T Consensus 4 k~vlITGas~GIG~aia~~L~~~G~~-------~V~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~ 74 (314)
T TIGR01289 4 PTVIITGASSGLGLYAAKALAATGEW-------HVIMACRDF--LKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQ 74 (314)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCCC-------EEEEEeCCH--HHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHH
Confidence 478999999999999999999988 6 788888764 33332222332111000 01221111111
Q ss_pred --hhcCCCcEEEEeCCCCCCC----CCCH---HHHHHhhHHH----HHHHHHHHhhhcCCCeEEEEEcCc
Q 020875 77 --EACTGVNIAVMVGGFPRKE----GMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANP 133 (320)
Q Consensus 77 --~al~~aDvVi~~ag~~~~~----~~~r---~~~~~~n~~~----~~~i~~~i~~~~~~~~~viv~snP 133 (320)
+.+...|++|+.||+.... ..+. ...+..|+.. ++.+.+.+++.....+++|++|+-
T Consensus 75 ~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~ 144 (314)
T TIGR01289 75 FRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSI 144 (314)
T ss_pred HHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecC
Confidence 1134689999999873211 1122 3345677655 444566665542113577777753
No 356
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.32 E-value=0.0028 Score=57.44 Aligned_cols=157 Identities=15% Similarity=0.131 Sum_probs=86.8
Q ss_pred CEEEEEcCC--ChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCc-cchhHHHHHHHhcccCCCCcceEEeCChh------
Q 020875 6 VRVLVTGAA--GQIGYALVPMIARGVMLGTDQPVILHMLDIPPA-AEALNGVKMELVDAAFPLLKGVVATTDAV------ 76 (320)
Q Consensus 6 ~kI~IiGA~--G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~-~~~~~~~~~dl~~~~~~~~~~v~~~~~~~------ 76 (320)
++++||||+ +-||.+++..|++.|. .|++.++++. .++++....++.. ......++....+..
T Consensus 11 k~~lItGas~~~GIG~aia~~la~~G~-------~V~l~~r~~~~~~~~~~l~~~~~~-~~~~~~Dl~~~~~v~~~~~~~ 82 (272)
T PRK08159 11 KRGLILGVANNRSIAWGIAKACRAAGA-------ELAFTYQGDALKKRVEPLAAELGA-FVAGHCDVTDEASIDAVFETL 82 (272)
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCC-------EEEEEcCchHHHHHHHHHHHhcCC-ceEEecCCCCHHHHHHHHHHH
Confidence 579999986 6899999999999987 7888776421 1222211111110 001111222111111
Q ss_pred -hhcCCCcEEEEeCCCCCC-----C--CCC---HHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHC
Q 020875 77 -EACTGVNIAVMVGGFPRK-----E--GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFA 145 (320)
Q Consensus 77 -~al~~aDvVi~~ag~~~~-----~--~~~---r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~ 145 (320)
+.+...|++|+.||+... + ..+ ....+..|+.....+++.+.+.-..++.+|++|.....
T Consensus 83 ~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~--------- 153 (272)
T PRK08159 83 EKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAE--------- 153 (272)
T ss_pred HHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccc---------
Confidence 223468999999987431 1 112 23456678766666666555432133567777643210
Q ss_pred CCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 146 PSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 146 ~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
...|....|+.++.-...+-+.++..+. +..|+.
T Consensus 154 ~~~p~~~~Y~asKaal~~l~~~la~el~--~~gIrV 187 (272)
T PRK08159 154 KVMPHYNVMGVAKAALEASVKYLAVDLG--PKNIRV 187 (272)
T ss_pred cCCCcchhhhhHHHHHHHHHHHHHHHhc--ccCeEE
Confidence 1223223577777777777777888765 455653
No 357
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=97.32 E-value=0.0016 Score=58.19 Aligned_cols=156 Identities=13% Similarity=0.111 Sum_probs=82.8
Q ss_pred EEEEEcCCChhHHHHHHHHHh----cCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC-----CCcceEEeCChhh
Q 020875 7 RVLVTGAAGQIGYALVPMIAR----GVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-----LLKGVVATTDAVE 77 (320)
Q Consensus 7 kI~IiGA~G~vG~~la~~L~~----~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~-----~~~~v~~~~~~~~ 77 (320)
.++||||++.+|.+++..|+. .|. .|++.++++ +.++....++...... ...++....+..+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~ 72 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGS-------VLVLSARND--EALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQ 72 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCc-------EEEEEEcCH--HHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHH
Confidence 478999999999999999986 454 788998864 4444444444321100 0112221111212
Q ss_pred hc---C--------CCcEEEEeCCCCCCC----C--CC---HHHHHHhhHHHHHHH----HHHHhhhcCCCeEEEEEcCc
Q 020875 78 AC---T--------GVNIAVMVGGFPRKE----G--ME---RKDVMSKNVSIYKAQ----ASALEQHAAPNCKVLVVANP 133 (320)
Q Consensus 78 al---~--------~aDvVi~~ag~~~~~----~--~~---r~~~~~~n~~~~~~i----~~~i~~~~~~~~~viv~snP 133 (320)
.+ . +-|++|+.||..... . .+ ..+.+..|+.....+ .+.+++.....+.++++|+.
T Consensus 73 ~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~ 152 (256)
T TIGR01500 73 LLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSL 152 (256)
T ss_pred HHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCH
Confidence 11 1 126899999863211 1 11 234566776655444 44444321123567777753
Q ss_pred chhhHHHHHHHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeee
Q 020875 134 ANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182 (320)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~ 182 (320)
... ...|..-.|+.++.-...+.+.++..+. +..|+..
T Consensus 153 ~~~---------~~~~~~~~Y~asKaal~~l~~~la~e~~--~~~i~v~ 190 (256)
T TIGR01500 153 CAI---------QPFKGWALYCAGKAARDMLFQVLALEEK--NPNVRVL 190 (256)
T ss_pred HhC---------CCCCCchHHHHHHHHHHHHHHHHHHHhc--CCCeEEE
Confidence 211 1222222356666656666677777765 4566643
No 358
>PRK05599 hypothetical protein; Provisional
Probab=97.32 E-value=0.011 Score=52.47 Aligned_cols=154 Identities=14% Similarity=0.166 Sum_probs=86.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC----CCcceEEeCCh------
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP----LLKGVVATTDA------ 75 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~----~~~~v~~~~~~------ 75 (320)
|.++||||++.+|.+++..|.+ |. .|++.++++ ++++....++...... ...++....+.
T Consensus 1 ~~vlItGas~GIG~aia~~l~~-g~-------~Vil~~r~~--~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 70 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLCH-GE-------DVVLAARRP--EAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQ 70 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHhC-CC-------EEEEEeCCH--HHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHH
Confidence 4689999999999999999984 64 788998864 4455444455432110 01122221111
Q ss_pred -hhhcCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHH----HHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHH
Q 020875 76 -VEACTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKEF 144 (320)
Q Consensus 76 -~~al~~aDvVi~~ag~~~~~~---~~---r~~~~~~n~~~----~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~ 144 (320)
.+.+...|++|+.+|...... .+ ..+....|... .+.+.+.+.+.. .++.+|++|+-...
T Consensus 71 ~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~~g~Iv~isS~~~~-------- 141 (246)
T PRK05599 71 TQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQT-APAAIVAFSSIAGW-------- 141 (246)
T ss_pred HHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcC-CCCEEEEEeccccc--------
Confidence 222346899999998743211 11 11233344333 334455565432 24677877764321
Q ss_pred CCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 145 ~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
.+.|..-.|+.++.-...+-..+++.++ +..|+.
T Consensus 142 -~~~~~~~~Y~asKaa~~~~~~~la~el~--~~~I~v 175 (246)
T PRK05599 142 -RARRANYVYGSTKAGLDAFCQGLADSLH--GSHVRL 175 (246)
T ss_pred -cCCcCCcchhhHHHHHHHHHHHHHHHhc--CCCceE
Confidence 1122222577777666677777888765 345663
No 359
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=97.28 E-value=0.0029 Score=50.40 Aligned_cols=73 Identities=25% Similarity=0.262 Sum_probs=46.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHhc-CcCCCCCCeEEE-EEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCc
Q 020875 6 VRVLVTGAAGQIGYALVPMIARG-VMLGTDQPVILH-MLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~-~~~~~~~~~ev~-l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aD 83 (320)
|||+|+|++|.+|+.++..+.+. ++ +++ .+|++++ + ..+ .|+.+........+..+.++.+.+..+|
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~-------~lv~~v~~~~~-~-~~g--~d~g~~~~~~~~~~~v~~~l~~~~~~~D 69 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGF-------ELVGAVDRKPS-A-KVG--KDVGELAGIGPLGVPVTDDLEELLEEAD 69 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTE-------EEEEEEETTTS-T-TTT--SBCHHHCTSST-SSBEBS-HHHHTTH-S
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCc-------EEEEEEecCCc-c-ccc--chhhhhhCcCCcccccchhHHHhcccCC
Confidence 69999998899999999999884 44 654 6777531 1 111 2332222111345566678889999999
Q ss_pred EEEEeC
Q 020875 84 IAVMVG 89 (320)
Q Consensus 84 vVi~~a 89 (320)
+||-..
T Consensus 70 VvIDfT 75 (124)
T PF01113_consen 70 VVIDFT 75 (124)
T ss_dssp EEEEES
T ss_pred EEEEcC
Confidence 998763
No 360
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.27 E-value=0.005 Score=54.75 Aligned_cols=72 Identities=22% Similarity=0.197 Sum_probs=46.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCc
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aD 83 (320)
+.+||+|+| +|.+|.+++..|+..+... ..++.+++++. .++++. +.+.. .+....+..+.++++|
T Consensus 3 ~~~kI~iIG-~G~mg~ala~~l~~~~~~~---~~~i~~~~~~~-~~~~~~----~~~~~-----~~~~~~~~~~~~~~~D 68 (245)
T PRK07634 3 KKHRILFIG-AGRMAEAIFSGLLKTSKEY---IEEIIVSNRSN-VEKLDQ----LQARY-----NVSTTTDWKQHVTSVD 68 (245)
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHhCCCCC---cCeEEEECCCC-HHHHHH----HHHHc-----CcEEeCChHHHHhcCC
Confidence 357999999 6999999999998775321 11366777531 233332 22111 1233456777889999
Q ss_pred EEEEeC
Q 020875 84 IAVMVG 89 (320)
Q Consensus 84 vVi~~a 89 (320)
+||++.
T Consensus 69 iViiav 74 (245)
T PRK07634 69 TIVLAM 74 (245)
T ss_pred EEEEec
Confidence 999984
No 361
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=97.25 E-value=0.0015 Score=61.22 Aligned_cols=77 Identities=18% Similarity=0.402 Sum_probs=49.5
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcC
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT 80 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~ 80 (320)
|+.+.+||+|+||+|++|..++..|.....+. ..++.++...+ -.|+...+.. .++.+..-..+.++
T Consensus 1 ~~~~~~~VaIvGATG~vG~ell~lL~~h~~f~---v~~l~~~aS~~----saGk~~~~~~------~~l~v~~~~~~~~~ 67 (347)
T PRK06728 1 MSEKGYHVAVVGATGAVGQKIIELLEKETKFN---IAEVTLLSSKR----SAGKTVQFKG------REIIIQEAKINSFE 67 (347)
T ss_pred CCCCCCEEEEEeCCCHHHHHHHHHHHHCCCCC---cccEEEEECcc----cCCCCeeeCC------cceEEEeCCHHHhc
Confidence 78888999999999999999999988544431 12477776532 1233222211 12333322235678
Q ss_pred CCcEEEEeCC
Q 020875 81 GVNIAVMVGG 90 (320)
Q Consensus 81 ~aDvVi~~ag 90 (320)
++|+||++++
T Consensus 68 ~~Divf~a~~ 77 (347)
T PRK06728 68 GVDIAFFSAG 77 (347)
T ss_pred CCCEEEECCC
Confidence 9999999874
No 362
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.25 E-value=0.0061 Score=54.73 Aligned_cols=157 Identities=16% Similarity=0.204 Sum_probs=83.7
Q ss_pred CEEEEEcC--CChhHHHHHHHHHhcCcCCCCCCeEEEEEecCC-ccchhHHHHHHHhcccCCCCcceEEeCChh------
Q 020875 6 VRVLVTGA--AGQIGYALVPMIARGVMLGTDQPVILHMLDIPP-AAEALNGVKMELVDAAFPLLKGVVATTDAV------ 76 (320)
Q Consensus 6 ~kI~IiGA--~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~-~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~------ 76 (320)
++++|||| ++-+|.+++..|++.|. .|++.++.. +.+.++....++.. ......++....+..
T Consensus 7 k~vlItGas~~~GIG~a~a~~l~~~G~-------~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Dv~d~~~v~~~~~~~ 78 (260)
T PRK06997 7 KRILITGLLSNRSIAYGIAKACKREGA-------ELAFTYVGDRFKDRITEFAAEFGS-DLVFPCDVASDEQIDALFASL 78 (260)
T ss_pred cEEEEeCCCCCCcHHHHHHHHHHHCCC-------eEEEEccchHHHHHHHHHHHhcCC-cceeeccCCCHHHHHHHHHHH
Confidence 57999996 56899999999999886 788776431 11222221111111 001112222222222
Q ss_pred -hhcCCCcEEEEeCCCCCCC--------CCCHH---HHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHH
Q 020875 77 -EACTGVNIAVMVGGFPRKE--------GMERK---DVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEF 144 (320)
Q Consensus 77 -~al~~aDvVi~~ag~~~~~--------~~~r~---~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~ 144 (320)
+.+...|++|+.||..... ..+.+ ..+..|+.....+.+.+..+-..++.+|++|+-...
T Consensus 79 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~-------- 150 (260)
T PRK06997 79 GQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAE-------- 150 (260)
T ss_pred HHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccc--------
Confidence 2235689999999874321 12222 345667665555554444432123567777643211
Q ss_pred CCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeee
Q 020875 145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (320)
Q Consensus 145 ~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~ 181 (320)
.+.|..-.|+.++.--..+-+.+|..+. +..|+.
T Consensus 151 -~~~~~~~~Y~asKaal~~l~~~la~el~--~~gIrV 184 (260)
T PRK06997 151 -RVVPNYNTMGLAKASLEASVRYLAVSLG--PKGIRA 184 (260)
T ss_pred -cCCCCcchHHHHHHHHHHHHHHHHHHhc--ccCeEE
Confidence 1122222466676666677777887765 445663
No 363
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=97.24 E-value=0.0032 Score=52.07 Aligned_cols=121 Identities=20% Similarity=0.190 Sum_probs=73.4
Q ss_pred EEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeC-------Chh
Q 020875 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATT-------DAV 76 (320)
Q Consensus 7 kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~-------~~~ 76 (320)
.++|+||++.+|..++..|+++|- ..|++++++++.+.+......+...... ...++.... ...
T Consensus 2 ~~lItGa~~giG~~~a~~l~~~g~------~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (167)
T PF00106_consen 2 TVLITGASSGIGRALARALARRGA------RVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVI 75 (167)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTT------EEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhcCc------eEEEEeeecccccccccccccccccccccccccccccccccccccccccc
Confidence 588999999999999999998854 2788888862223333333334322110 001111101 112
Q ss_pred hhcCCCcEEEEeCCCCCCCCC------CHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcch
Q 020875 77 EACTGVNIAVMVGGFPRKEGM------ERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN 135 (320)
Q Consensus 77 ~al~~aDvVi~~ag~~~~~~~------~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~ 135 (320)
+.....|++|+.+|....... .-.+.+..|+.....+.+.+.. . +...+|++|+...
T Consensus 76 ~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~-~~g~iv~~sS~~~ 138 (167)
T PF00106_consen 76 KRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP-Q-GGGKIVNISSIAG 138 (167)
T ss_dssp HHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH-H-TTEEEEEEEEGGG
T ss_pred cccccccccccccccccccccccccchhhhhccccccceeeeeeehhee-c-cccceEEecchhh
Confidence 234578999999998652211 1234677887777777777777 3 4677888886553
No 364
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=97.24 E-value=0.0058 Score=56.47 Aligned_cols=120 Identities=13% Similarity=0.183 Sum_probs=67.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHH----HhcccCCCCcceEEeCChhhhcC
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKME----LVDAAFPLLKGVVATTDAVEACT 80 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~d----l~~~~~~~~~~v~~~~~~~~al~ 80 (320)
.|||+|+| +|.||+.++..|.+.|. +|.++++.. +.++....+ +.+.... ..+.......+...
T Consensus 2 ~m~I~IiG-aGaiG~~~a~~L~~~G~-------~V~lv~r~~--~~~~~i~~~~Gl~i~~~g~~--~~~~~~~~~~~~~~ 69 (305)
T PRK05708 2 SMTWHILG-AGSLGSLWACRLARAGL-------PVRLILRDR--QRLAAYQQAGGLTLVEQGQA--SLYAIPAETADAAE 69 (305)
T ss_pred CceEEEEC-CCHHHHHHHHHHHhCCC-------CeEEEEech--HHHHHHhhcCCeEEeeCCcc--eeeccCCCCccccc
Confidence 47999999 59999999999999886 799999853 222211110 1100000 01111111123346
Q ss_pred CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCCcEEEe
Q 020875 81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCL 156 (320)
Q Consensus 81 ~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~i~~~ 156 (320)
..|+||++.-.. ...+.++.++.+..++..++.+-|=++....+. +. ++.+++.++
T Consensus 70 ~~D~viv~vK~~----------------~~~~al~~l~~~l~~~t~vv~lQNGv~~~e~l~-~~---~~~~~v~~g 125 (305)
T PRK05708 70 PIHRLLLACKAY----------------DAEPAVASLAHRLAPGAELLLLQNGLGSQDAVA-AR---VPHARCIFA 125 (305)
T ss_pred ccCEEEEECCHH----------------hHHHHHHHHHhhCCCCCEEEEEeCCCCCHHHHH-Hh---CCCCcEEEE
Confidence 789999985211 123344455554446677888888776554442 22 455565443
No 365
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.24 E-value=0.005 Score=55.97 Aligned_cols=69 Identities=19% Similarity=0.302 Sum_probs=47.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcEE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDvV 85 (320)
+||++|| +|.+|++++..|++.++.. ..+|..+|+++ ++++ .+.+.. .+....+..+.+++||+|
T Consensus 3 ~~IgfIG-~G~MG~aia~~L~~~g~~~---~~~I~v~~r~~--~~~~----~l~~~~-----g~~~~~~~~e~~~~aDiI 67 (272)
T PRK12491 3 KQIGFIG-CGNMGIAMIGGMINKNIVS---PDQIICSDLNV--SNLK----NASDKY-----GITITTNNNEVANSADIL 67 (272)
T ss_pred CeEEEEC-ccHHHHHHHHHHHHCCCCC---CceEEEECCCH--HHHH----HHHHhc-----CcEEeCCcHHHHhhCCEE
Confidence 4899999 7999999999999887532 13688999863 3332 122110 123344566778899999
Q ss_pred EEeC
Q 020875 86 VMVG 89 (320)
Q Consensus 86 i~~a 89 (320)
|++.
T Consensus 68 iLav 71 (272)
T PRK12491 68 ILSI 71 (272)
T ss_pred EEEe
Confidence 9985
No 366
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.24 E-value=0.0036 Score=58.55 Aligned_cols=170 Identities=12% Similarity=0.061 Sum_probs=89.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHH---HHHH-hcccC-------CCCcceE----
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGV---KMEL-VDAAF-------PLLKGVV---- 70 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~---~~dl-~~~~~-------~~~~~v~---- 70 (320)
++|.+|||+||+|..++.+|+.+-.. .|++.-+-.+.+.+... ..+. .+-+. +..+++.
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~------kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~l 74 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDA------KVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDL 74 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCC------cEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccC
Confidence 47899999999999999999876543 45444333332222111 1110 00000 1111211
Q ss_pred -EeCChhhhcC-CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHC-CC
Q 020875 71 -ATTDAVEACT-GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFA-PS 147 (320)
Q Consensus 71 -~~~~~~~al~-~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~-~~ 147 (320)
........|. .+|.|||.|.... .-.+-.++...|+.++.++++.....- ++. +..+| ++.+.++...... ..
T Consensus 75 GL~~~~~~~La~~vD~I~H~gA~Vn-~v~pYs~L~~~NVlGT~evlrLa~~gk-~Kp-~~yVS-sisv~~~~~~~~~~~~ 150 (382)
T COG3320 75 GLSERTWQELAENVDLIIHNAALVN-HVFPYSELRGANVLGTAEVLRLAATGK-PKP-LHYVS-SISVGETEYYSNFTVD 150 (382)
T ss_pred CCCHHHHHHHhhhcceEEecchhhc-ccCcHHHhcCcchHhHHHHHHHHhcCC-Cce-eEEEe-eeeeccccccCCCccc
Confidence 1111233444 5999999876431 112345677899999999999887652 322 33333 3333222111000 00
Q ss_pred CC-------CCc-E---EEeehhhHHHHHHHHHHHcCCCCCCeeeeEEEc
Q 020875 148 IP-------AKN-I---TCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG 186 (320)
Q Consensus 148 ~~-------~~~-i---~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~v~G 186 (320)
+. ..+ . |+-++--.+++.+...+. |.+..-+|.-+|.|
T Consensus 151 ~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~g 199 (382)
T COG3320 151 FDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITG 199 (382)
T ss_pred cccccccccccCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeec
Confidence 11 111 1 233556666777766666 98888888776655
No 367
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.24 E-value=0.0059 Score=54.55 Aligned_cols=156 Identities=10% Similarity=0.089 Sum_probs=81.4
Q ss_pred CCEEEEEcCCC--hhHHHHHHHHHhcCcCCCCCCeEEEEEecCC---------ccchhHHHHHHHhcccCC---CCcceE
Q 020875 5 PVRVLVTGAAG--QIGYALVPMIARGVMLGTDQPVILHMLDIPP---------AAEALNGVKMELVDAAFP---LLKGVV 70 (320)
Q Consensus 5 ~~kI~IiGA~G--~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~---------~~~~~~~~~~dl~~~~~~---~~~~v~ 70 (320)
.++|+||||+| .+|.+++..|++.|. .|++.++.. +.+.......++...... ...++.
T Consensus 6 ~k~vlVtGas~~~giG~~~a~~l~~~G~-------~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~ 78 (256)
T PRK12859 6 NKVAVVTGVSRLDGIGAAICKELAEAGA-------DIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLT 78 (256)
T ss_pred CcEEEEECCCCCCChHHHHHHHHHHCCC-------eEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCC
Confidence 46899999874 799999999999886 677765321 001111112223221110 011221
Q ss_pred EeCChh-------hhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHH----HHHHhhhcCCCeEEEEEcCc
Q 020875 71 ATTDAV-------EACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQ----ASALEQHAAPNCKVLVVANP 133 (320)
Q Consensus 71 ~~~~~~-------~al~~aDvVi~~ag~~~~~---~~~r---~~~~~~n~~~~~~i----~~~i~~~~~~~~~viv~snP 133 (320)
...+.. +.+.+.|++|+.||..... ..+. .+.+..|+.....+ .+.+++. ..+++|++|+.
T Consensus 79 ~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~g~iv~isS~ 156 (256)
T PRK12859 79 QNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKK--SGGRIINMTSG 156 (256)
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCeEEEEEccc
Confidence 111111 2234579999999874321 1222 23456676644444 4444433 24677777764
Q ss_pred chhhHHHHHHHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 134 ANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
... .+.+....|+.++.-...+-+.+++.+. +..|+
T Consensus 157 ~~~---------~~~~~~~~Y~~sK~a~~~l~~~la~~~~--~~~i~ 192 (256)
T PRK12859 157 QFQ---------GPMVGELAYAATKGAIDALTSSLAAEVA--HLGIT 192 (256)
T ss_pred ccC---------CCCCCchHHHHHHHHHHHHHHHHHHHhh--hhCeE
Confidence 321 1223222456665555566667777765 34455
No 368
>PRK08303 short chain dehydrogenase; Provisional
Probab=97.24 E-value=0.0069 Score=55.91 Aligned_cols=161 Identities=12% Similarity=0.059 Sum_probs=86.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCc--------cchhHHHHHHHhcccCC---CCcceEEeC
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPA--------AEALNGVKMELVDAAFP---LLKGVVATT 73 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~--------~~~~~~~~~dl~~~~~~---~~~~v~~~~ 73 (320)
.+.++||||++.+|.+++..|+..|. .|++.+++.. .+++......+...... ...++....
T Consensus 8 ~k~~lITGgs~GIG~aia~~la~~G~-------~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~ 80 (305)
T PRK08303 8 GKVALVAGATRGAGRGIAVELGAAGA-------TVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPE 80 (305)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence 36899999999999999999999886 7889888631 12222222223221100 111222211
Q ss_pred Chh-------hhcCCCcEEEEeC-CCCC-----CC--CCCH---HHHHHhhHHH----HHHHHHHHhhhcCCCeEEEEEc
Q 020875 74 DAV-------EACTGVNIAVMVG-GFPR-----KE--GMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVA 131 (320)
Q Consensus 74 ~~~-------~al~~aDvVi~~a-g~~~-----~~--~~~r---~~~~~~n~~~----~~~i~~~i~~~~~~~~~viv~s 131 (320)
+.. +.+...|++|+.| |... .+ ..+. .+.+..|+.. ++.+++.+.+. ..+++|++|
T Consensus 81 ~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~--~~g~IV~is 158 (305)
T PRK08303 81 QVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRR--PGGLVVEIT 158 (305)
T ss_pred HHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhC--CCcEEEEEC
Confidence 211 2234689999998 7421 11 1111 2234455543 44445555443 236778877
Q ss_pred CcchhhHHHHHHHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeee
Q 020875 132 NPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182 (320)
Q Consensus 132 nP~~~~~~~~~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~ 182 (320)
+..... . ....+..-.|+.++.....|-+.+|..++ +..|+..
T Consensus 159 S~~~~~-----~-~~~~~~~~~Y~asKaal~~lt~~La~el~--~~gIrVn 201 (305)
T PRK08303 159 DGTAEY-----N-ATHYRLSVFYDLAKTSVNRLAFSLAHELA--PHGATAV 201 (305)
T ss_pred Cccccc-----c-CcCCCCcchhHHHHHHHHHHHHHHHHHhh--hcCcEEE
Confidence 532110 0 01111112467777777777777888765 4567643
No 369
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.23 E-value=0.0015 Score=52.89 Aligned_cols=77 Identities=21% Similarity=0.176 Sum_probs=53.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCc
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aD 83 (320)
+..|++|+| +|.+|..+++.|...|.- +|.+++|+. ++++..+..+... ...+....++.+.+.++|
T Consensus 11 ~~~~vlviG-aGg~ar~v~~~L~~~g~~------~i~i~nRt~--~ra~~l~~~~~~~----~~~~~~~~~~~~~~~~~D 77 (135)
T PF01488_consen 11 KGKRVLVIG-AGGAARAVAAALAALGAK------EITIVNRTP--ERAEALAEEFGGV----NIEAIPLEDLEEALQEAD 77 (135)
T ss_dssp TTSEEEEES-SSHHHHHHHHHHHHTTSS------EEEEEESSH--HHHHHHHHHHTGC----SEEEEEGGGHCHHHHTES
T ss_pred CCCEEEEEC-CHHHHHHHHHHHHHcCCC------EEEEEECCH--HHHHHHHHHcCcc----ccceeeHHHHHHHHhhCC
Confidence 457999999 599999999999998862 799999863 5555444444111 112223345667788999
Q ss_pred EEEEeCCCCC
Q 020875 84 IAVMVGGFPR 93 (320)
Q Consensus 84 vVi~~ag~~~ 93 (320)
+||.+.+.+.
T Consensus 78 ivI~aT~~~~ 87 (135)
T PF01488_consen 78 IVINATPSGM 87 (135)
T ss_dssp EEEE-SSTTS
T ss_pred eEEEecCCCC
Confidence 9999876554
No 370
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=97.23 E-value=0.0018 Score=53.44 Aligned_cols=118 Identities=14% Similarity=0.079 Sum_probs=66.3
Q ss_pred EEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccch-hHHHHHHHhcccCC---CCcceEEeCChhhh----
Q 020875 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEA-LNGVKMELVDAAFP---LLKGVVATTDAVEA---- 78 (320)
Q Consensus 7 kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~-~~~~~~dl~~~~~~---~~~~v~~~~~~~~a---- 78 (320)
++.|+||+|++|.+++..|.++|.. .+.+.++++.... ......++...... ...++....+..+.
T Consensus 2 ~~li~Ga~~~iG~~~~~~l~~~g~~------~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 75 (180)
T smart00822 2 TYLITGGLGGLGLELARWLAERGAR------HLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAI 75 (180)
T ss_pred EEEEEcCCChHHHHHHHHHHHhhCC------eEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence 7899999999999999999987752 4666666532111 11111222211100 01111111111222
Q ss_pred ---cCCCcEEEEeCCCCCCC---CC---CHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcC
Q 020875 79 ---CTGVNIAVMVGGFPRKE---GM---ERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN 132 (320)
Q Consensus 79 ---l~~aDvVi~~ag~~~~~---~~---~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~sn 132 (320)
+...|.||+.+|..... .. .....+..|+.....+.+.+.+.. + .+++++|+
T Consensus 76 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~ii~~ss 136 (180)
T smart00822 76 PARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLP-L-DFFVLFSS 136 (180)
T ss_pred HHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCC-c-ceEEEEcc
Confidence 23469999999864311 11 123457788888898888886653 3 45666664
No 371
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=97.22 E-value=0.0026 Score=58.57 Aligned_cols=67 Identities=12% Similarity=0.131 Sum_probs=44.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcEE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDvV 85 (320)
|||+|+| .|.+|++++..|...|+ +|.++|+++ ++++. +.+..... .....+..+.++++|+|
T Consensus 1 M~Ig~IG-lG~mG~~la~~L~~~g~-------~V~~~dr~~--~~~~~----l~~~g~~~---~~s~~~~~~~~~~~dvI 63 (298)
T TIGR00872 1 MQLGLIG-LGRMGANIVRRLAKRGH-------DCVGYDHDQ--DAVKA----MKEDRTTG---VANLRELSQRLSAPRVV 63 (298)
T ss_pred CEEEEEc-chHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHH----HHHcCCcc---cCCHHHHHhhcCCCCEE
Confidence 5899999 79999999999999887 899999874 33322 22111000 00011234456789999
Q ss_pred EEeC
Q 020875 86 VMVG 89 (320)
Q Consensus 86 i~~a 89 (320)
|++.
T Consensus 64 i~~v 67 (298)
T TIGR00872 64 WVMV 67 (298)
T ss_pred EEEc
Confidence 9984
No 372
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.19 E-value=0.001 Score=57.19 Aligned_cols=78 Identities=14% Similarity=0.132 Sum_probs=49.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCc--ceEEeCChhhhcCC
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLK--GVVATTDAVEACTG 81 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~--~v~~~~~~~~al~~ 81 (320)
+.++++|+||+|.+|..++..|...+. +|.+++++. ++++....++.+....... +.....+..+++++
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-------~V~l~~R~~--~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-------RVVLVGRDL--ERAQKAADSLRARFGEGVGAVETSDDAARAAAIKG 97 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEcCCH--HHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhc
Confidence 457999999899999999999998775 789998763 4444433333211100000 01111233577899
Q ss_pred CcEEEEeCC
Q 020875 82 VNIAVMVGG 90 (320)
Q Consensus 82 aDvVi~~ag 90 (320)
+|+||.+..
T Consensus 98 ~diVi~at~ 106 (194)
T cd01078 98 ADVVFAAGA 106 (194)
T ss_pred CCEEEECCC
Confidence 999888754
No 373
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=97.19 E-value=0.0053 Score=60.03 Aligned_cols=101 Identities=11% Similarity=-0.003 Sum_probs=61.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcC---C
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT---G 81 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~---~ 81 (320)
+.+|+|+| .|.+|++++..|+.+|+ +|.++|+++ ++.+.......+. ...+....++.++++ +
T Consensus 1 ~~~IgvIG-LG~MG~~lA~nL~~~G~-------~V~v~dr~~--~~~~~l~~~~~~~----g~~i~~~~s~~e~v~~l~~ 66 (470)
T PTZ00142 1 MSDIGLIG-LAVMGQNLALNIASRGF-------KISVYNRTY--EKTEEFVKKAKEG----NTRVKGYHTLEELVNSLKK 66 (470)
T ss_pred CCEEEEEe-EhHHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHhhhhc----CCcceecCCHHHHHhcCCC
Confidence 35899999 79999999999999997 899999974 3333221111110 112334456666554 5
Q ss_pred CcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcc
Q 020875 82 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPA 134 (320)
Q Consensus 82 aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~ 134 (320)
+|+||++.-. + +.+.++++.+..+-.++.++|-.||..
T Consensus 67 ~d~Iil~v~~----~-----------~~v~~vi~~l~~~L~~g~iIID~gn~~ 104 (470)
T PTZ00142 67 PRKVILLIKA----G-----------EAVDETIDNLLPLLEKGDIIIDGGNEW 104 (470)
T ss_pred CCEEEEEeCC----h-----------HHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 8988887421 1 223344444444433556677777743
No 374
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=97.19 E-value=0.0057 Score=56.10 Aligned_cols=65 Identities=18% Similarity=0.294 Sum_probs=47.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDv 84 (320)
+|||+|+| .|.+|+.++..|...|+ +|.++|+++ ++.+. +... ......+..++++++|+
T Consensus 2 ~~~IgviG-~G~mG~~~a~~l~~~g~-------~v~~~d~~~--~~~~~----~~~~------g~~~~~~~~e~~~~~d~ 61 (296)
T PRK11559 2 TMKVGFIG-LGIMGKPMSKNLLKAGY-------SLVVYDRNP--EAVAE----VIAA------GAETASTAKAVAEQCDV 61 (296)
T ss_pred CceEEEEc-cCHHHHHHHHHHHHCCC-------eEEEEcCCH--HHHHH----HHHC------CCeecCCHHHHHhcCCE
Confidence 36899999 79999999999998886 789999864 22221 1111 12233466778899999
Q ss_pred EEEeC
Q 020875 85 AVMVG 89 (320)
Q Consensus 85 Vi~~a 89 (320)
||++.
T Consensus 62 vi~~v 66 (296)
T PRK11559 62 IITML 66 (296)
T ss_pred EEEeC
Confidence 99985
No 375
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.19 E-value=0.0027 Score=59.46 Aligned_cols=75 Identities=24% Similarity=0.383 Sum_probs=46.1
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcC
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT 80 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~ 80 (320)
|+ +|+||+|+||+|++|.-++..|.++++- ..++.++...+. .|+.+.+.. .++........+++
T Consensus 1 m~-~~~~IaIvGATG~vG~eLlrlL~~~~hP----~~~l~~v~s~~~----aG~~l~~~~------~~l~~~~~~~~~~~ 65 (336)
T PRK05671 1 MS-QPLDIAVVGATGTVGEALVQILEERDFP----VGTLHLLASSES----AGHSVPFAG------KNLRVREVDSFDFS 65 (336)
T ss_pred CC-CCCEEEEEccCCHHHHHHHHHHhhCCCC----ceEEEEEECccc----CCCeeccCC------cceEEeeCChHHhc
Confidence 55 5589999999999999999999976552 236666654321 222222211 12222211123478
Q ss_pred CCcEEEEeCC
Q 020875 81 GVNIAVMVGG 90 (320)
Q Consensus 81 ~aDvVi~~ag 90 (320)
++|+||++.+
T Consensus 66 ~vD~vFla~p 75 (336)
T PRK05671 66 QVQLAFFAAG 75 (336)
T ss_pred CCCEEEEcCC
Confidence 9999999764
No 376
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.19 E-value=0.012 Score=52.79 Aligned_cols=161 Identities=14% Similarity=0.163 Sum_probs=82.9
Q ss_pred CCCC-CCEEEEEcC--CChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcc-c--CCCCcceEEeCC
Q 020875 1 MAKE-PVRVLVTGA--AGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-A--FPLLKGVVATTD 74 (320)
Q Consensus 1 m~~~-~~kI~IiGA--~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~-~--~~~~~~v~~~~~ 74 (320)
|+.- .+.++|||| ++.||.+++..|++.|. .|++.++++ +......++... . ..+..++....+
T Consensus 1 ~~~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~-------~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 70 (261)
T PRK08690 1 MGFLQGKKILITGMISERSIAYGIAKACREQGA-------ELAFTYVVD---KLEERVRKMAAELDSELVFRCDVASDDE 70 (261)
T ss_pred CCccCCcEEEEECCCCCCcHHHHHHHHHHHCCC-------EEEEEcCcH---HHHHHHHHHHhccCCceEEECCCCCHHH
Confidence 4442 358999996 56899999999999886 788776542 111112222211 0 011122222222
Q ss_pred hh-------hhcCCCcEEEEeCCCCCC-----C---CCCHHH---HHHhhHHHHHHHHHHHhhhc-CCCeEEEEEcCcch
Q 020875 75 AV-------EACTGVNIAVMVGGFPRK-----E---GMERKD---VMSKNVSIYKAQASALEQHA-APNCKVLVVANPAN 135 (320)
Q Consensus 75 ~~-------~al~~aDvVi~~ag~~~~-----~---~~~r~~---~~~~n~~~~~~i~~~i~~~~-~~~~~viv~snP~~ 135 (320)
.. +.+...|++|+.||.... + ..+..+ .+..|+.....+.+.+...- ...+.+|++|+...
T Consensus 71 v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~ 150 (261)
T PRK08690 71 INQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGA 150 (261)
T ss_pred HHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEccccc
Confidence 21 223468999999987532 1 112222 24456554433333322210 01256677765432
Q ss_pred hhHHHHHHHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCeeee
Q 020875 136 TNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182 (320)
Q Consensus 136 ~~~~~~~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~ 182 (320)
. .+.|..-.|+.++---..+-+.+|..+. +..|+..
T Consensus 151 ~---------~~~~~~~~Y~asKaal~~l~~~la~e~~--~~gIrVn 186 (261)
T PRK08690 151 V---------RAIPNYNVMGMAKASLEAGIRFTAACLG--KEGIRCN 186 (261)
T ss_pred c---------cCCCCcccchhHHHHHHHHHHHHHHHhh--hcCeEEE
Confidence 1 1222222567777666667777777654 4566643
No 377
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.18 E-value=0.0026 Score=55.31 Aligned_cols=237 Identities=19% Similarity=0.259 Sum_probs=124.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhc--CCC
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC--TGV 82 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al--~~a 82 (320)
++||.|+|++|-||+++..-+.+++.-+ ...++....+ +||.+.+ +.++-+ ..-
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~----e~wvf~~skd---------~DLt~~a-----------~t~~lF~~ekP 56 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDD----ENWVFIGSKD---------ADLTNLA-----------DTRALFESEKP 56 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCC----cceEEecccc---------ccccchH-----------HHHHHHhccCC
Confidence 4699999999999999999999887622 1455555321 3444332 222222 234
Q ss_pred cEEEEeCCCCC---CCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcC----------cchhhHHHHHHHCCCCC
Q 020875 83 NIAVMVGGFPR---KEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN----------PANTNALILKEFAPSIP 149 (320)
Q Consensus 83 DvVi~~ag~~~---~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~sn----------P~~~~~~~~~~~~~~~~ 149 (320)
-.|||+|.... ....-..|++..|+.+-.+++..+-+++-. +++...+ |+|-. +-...+ ..
T Consensus 57 thVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~--K~vsclStCIfPdkt~yPIdEt---mvh~gp-ph 130 (315)
T KOG1431|consen 57 THVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVK--KVVSCLSTCIFPDKTSYPIDET---MVHNGP-PH 130 (315)
T ss_pred ceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchh--hhhhhcceeecCCCCCCCCCHH---HhccCC-CC
Confidence 46777664321 011235688999999888888887776511 2332222 33211 111011 11
Q ss_pred CCcE-EEeeh--hhHHHHHHHHHHHcCCCCCCeeeeEEEcCCCCccccccccccc-----------c------CCCCCcc
Q 020875 150 AKNI-TCLTR--LDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV-----------N------TAAGEKP 209 (320)
Q Consensus 150 ~~~i-~~~t~--ld~~r~~~~~a~~l~v~~~~v~~~~v~G~hg~~~~~~~S~~~v-----------~------~~~~~~~ 209 (320)
+.++ +..+. .|. ..+.+..+.|-+..++--.+|+|.|. +.-|--|++-. + .-..|.|
T Consensus 131 psN~gYsyAKr~idv--~n~aY~~qhg~~~tsviPtNvfGphD-Nfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~P 207 (315)
T KOG1431|consen 131 PSNFGYSYAKRMIDV--QNQAYRQQHGRDYTSVIPTNVFGPHD-NFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSP 207 (315)
T ss_pred CCchHHHHHHHHHHH--HHHHHHHHhCCceeeeccccccCCCC-CCCcccccchHHHHHHHHHHHhcCCceEEEecCCCh
Confidence 2233 23332 222 23567778888888887778899884 44454444433 0 1123789
Q ss_pred hhhhcccchhhhhHHHHHHhh-hhHH-HHhcCCccchHHHHHHHHHHHHHHHhCCCCCcEEEEEEecCCcc
Q 020875 210 VRELVKDDAWLNGEFITTVQQ-RGAA-IIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSY 278 (320)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~v~~-~~~~-i~~~kg~~~~~~~a~a~~~~i~~~i~~~~~~~i~~~~v~~~g~y 278 (320)
+++++...++ -+-+.-.+++ .+.| |+-..|-+.-.+ -.-+++.+..++-. .+++.--.+.++|+|
T Consensus 208 lRqFiys~DL-A~l~i~vlr~Y~~vEpiils~ge~~EVt-I~e~aeaV~ea~~F--~G~l~~DttK~DGq~ 274 (315)
T KOG1431|consen 208 LRQFIYSDDL-ADLFIWVLREYEGVEPIILSVGESDEVT-IREAAEAVVEAVDF--TGKLVWDTTKSDGQF 274 (315)
T ss_pred HHHHhhHhHH-HHHHHHHHHhhcCccceEeccCccceeE-HHHHHHHHHHHhCC--CceEEeeccCCCCCc
Confidence 9988865432 1122222222 1222 222223211111 13344555555542 466665667788876
No 378
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=97.17 E-value=0.0025 Score=58.35 Aligned_cols=63 Identities=22% Similarity=0.314 Sum_probs=46.1
Q ss_pred EEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcEEE
Q 020875 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAV 86 (320)
Q Consensus 7 kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDvVi 86 (320)
||+|+| .|.+|+.++..|+..|+ +|.++|+++ ++++. +.... ....++..++++++|+||
T Consensus 1 ~IgvIG-~G~mG~~iA~~l~~~G~-------~V~~~dr~~--~~~~~----~~~~g------~~~~~~~~~~~~~aDivi 60 (291)
T TIGR01505 1 KVGFIG-LGIMGSPMSINLAKAGY-------QLHVTTIGP--EVADE----LLAAG------AVTAETARQVTEQADVIF 60 (291)
T ss_pred CEEEEE-ecHHHHHHHHHHHHCCC-------eEEEEcCCH--HHHHH----HHHCC------CcccCCHHHHHhcCCEEE
Confidence 699999 69999999999999887 899999864 33221 22111 112235678899999999
Q ss_pred EeC
Q 020875 87 MVG 89 (320)
Q Consensus 87 ~~a 89 (320)
++.
T Consensus 61 ~~v 63 (291)
T TIGR01505 61 TMV 63 (291)
T ss_pred Eec
Confidence 985
No 379
>PRK06720 hypothetical protein; Provisional
Probab=97.16 E-value=0.0055 Score=51.57 Aligned_cols=81 Identities=16% Similarity=0.150 Sum_probs=49.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCCh-----
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDA----- 75 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~----- 75 (320)
+.+.+.|+||+|.+|..++..|.+.|. +|.+.|++. +.+.....++...... ...++....+.
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-------~V~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~ 85 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-------KVIVTDIDQ--ESGQATVEEITNLGGEALFVSYDMEKQGDWQRVIS 85 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence 456899999999999999999999886 899999763 2333222333211100 11122111111
Q ss_pred --hhhcCCCcEEEEeCCCCC
Q 020875 76 --VEACTGVNIAVMVGGFPR 93 (320)
Q Consensus 76 --~~al~~aDvVi~~ag~~~ 93 (320)
.+.+...|++|+.||...
T Consensus 86 ~~~~~~G~iDilVnnAG~~~ 105 (169)
T PRK06720 86 ITLNAFSRIDMLFQNAGLYK 105 (169)
T ss_pred HHHHHcCCCCEEEECCCcCC
Confidence 123456899999998754
No 380
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=97.14 E-value=0.0088 Score=54.46 Aligned_cols=69 Identities=16% Similarity=0.346 Sum_probs=45.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchh-HHHHHHHhcccCCCCcceEEeCC-hhhhcCC
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEAL-NGVKMELVDAAFPLLKGVVATTD-AVEACTG 81 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~-~~~~~dl~~~~~~~~~~v~~~~~-~~~al~~ 81 (320)
.+++|+|+| .|.+|..++..|...|+ .+.+++++.+...+ .+..+++.|.. ..+ ..++.++
T Consensus 2 ~~~~v~IvG-~GliG~s~a~~l~~~g~-------~v~i~g~d~~~~~~~~a~~lgv~d~~---------~~~~~~~~~~~ 64 (279)
T COG0287 2 ASMKVGIVG-LGLMGGSLARALKEAGL-------VVRIIGRDRSAATLKAALELGVIDEL---------TVAGLAEAAAE 64 (279)
T ss_pred CCcEEEEEC-CchHHHHHHHHHHHcCC-------eEEEEeecCcHHHHHHHhhcCccccc---------ccchhhhhccc
Confidence 357999999 79999999999999998 45566665432222 22223333321 112 2677889
Q ss_pred CcEEEEeC
Q 020875 82 VNIAVMVG 89 (320)
Q Consensus 82 aDvVi~~a 89 (320)
+|+||++.
T Consensus 65 aD~Vivav 72 (279)
T COG0287 65 ADLVIVAV 72 (279)
T ss_pred CCEEEEec
Confidence 99999985
No 381
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=97.13 E-value=0.003 Score=60.05 Aligned_cols=53 Identities=15% Similarity=0.253 Sum_probs=43.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDv 84 (320)
.+||+|+||.|.+|..++..|...|+ +|.++|++. . .+..+++++||+
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~G~-------~V~~~d~~~-----------~--------------~~~~~~~~~aDl 145 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGY-------QVRILEQDD-----------W--------------DRAEDILADAGM 145 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHCCC-------eEEEeCCCc-----------c--------------hhHHHHHhcCCE
Confidence 47999999889999999999999887 899999741 0 023466789999
Q ss_pred EEEeC
Q 020875 85 AVMVG 89 (320)
Q Consensus 85 Vi~~a 89 (320)
||++.
T Consensus 146 Vilav 150 (374)
T PRK11199 146 VIVSV 150 (374)
T ss_pred EEEeC
Confidence 99985
No 382
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.12 E-value=0.0032 Score=57.61 Aligned_cols=74 Identities=23% Similarity=0.213 Sum_probs=52.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDv 84 (320)
..||+|+| +|.+|+++++.|...|.. +|.++|++. ++++..+.++.+.. +. ..+....+..+.++++|+
T Consensus 127 ~k~vlIlG-aGGaaraia~aL~~~G~~------~I~I~nR~~--~ka~~la~~l~~~~-~~-~~~~~~~~~~~~~~~aDi 195 (284)
T PRK12549 127 LERVVQLG-AGGAGAAVAHALLTLGVE------RLTIFDVDP--ARAAALADELNARF-PA-ARATAGSDLAAALAAADG 195 (284)
T ss_pred CCEEEEEC-CcHHHHHHHHHHHHcCCC------EEEEECCCH--HHHHHHHHHHHhhC-CC-eEEEeccchHhhhCCCCE
Confidence 46899999 599999999999988862 799999974 56666666664432 11 122222344567899999
Q ss_pred EEEeC
Q 020875 85 AVMVG 89 (320)
Q Consensus 85 Vi~~a 89 (320)
||.+.
T Consensus 196 VInaT 200 (284)
T PRK12549 196 LVHAT 200 (284)
T ss_pred EEECC
Confidence 99984
No 383
>PLN02256 arogenate dehydrogenase
Probab=97.11 E-value=0.0048 Score=56.98 Aligned_cols=66 Identities=14% Similarity=0.220 Sum_probs=45.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhc-CC
Q 020875 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC-TG 81 (320)
Q Consensus 3 ~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al-~~ 81 (320)
.+++||+|+| .|.+|..++..|.+.|. +|..+|++. . ...+.++ . +....+..+.+ .+
T Consensus 34 ~~~~kI~IIG-~G~mG~slA~~L~~~G~-------~V~~~d~~~--~--~~~a~~~---g------v~~~~~~~e~~~~~ 92 (304)
T PLN02256 34 SRKLKIGIVG-FGNFGQFLAKTFVKQGH-------TVLATSRSD--Y--SDIAAEL---G------VSFFRDPDDFCEEH 92 (304)
T ss_pred CCCCEEEEEe-eCHHHHHHHHHHHhCCC-------EEEEEECcc--H--HHHHHHc---C------CeeeCCHHHHhhCC
Confidence 3568999999 69999999999988775 788999863 1 1112111 1 11233555555 47
Q ss_pred CcEEEEeC
Q 020875 82 VNIAVMVG 89 (320)
Q Consensus 82 aDvVi~~a 89 (320)
+|+||++.
T Consensus 93 aDvVilav 100 (304)
T PLN02256 93 PDVVLLCT 100 (304)
T ss_pred CCEEEEec
Confidence 99999985
No 384
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=97.10 E-value=0.0024 Score=58.05 Aligned_cols=66 Identities=14% Similarity=0.245 Sum_probs=48.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcEE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDvV 85 (320)
+||++|| .|.+|+.++.+|+..|+ ++.++|+++ ++.. ..+.... .....+..++.+++|+|
T Consensus 1 ~kIafIG-LG~MG~pmA~~L~~aG~-------~v~v~~r~~--~ka~---~~~~~~G------a~~a~s~~eaa~~aDvV 61 (286)
T COG2084 1 MKIAFIG-LGIMGSPMAANLLKAGH-------EVTVYNRTP--EKAA---ELLAAAG------ATVAASPAEAAAEADVV 61 (286)
T ss_pred CeEEEEc-CchhhHHHHHHHHHCCC-------EEEEEeCCh--hhhh---HHHHHcC------CcccCCHHHHHHhCCEE
Confidence 5899999 89999999999999998 899999974 3321 1222211 12223567899999999
Q ss_pred EEeCC
Q 020875 86 VMVGG 90 (320)
Q Consensus 86 i~~ag 90 (320)
|.+..
T Consensus 62 itmv~ 66 (286)
T COG2084 62 ITMLP 66 (286)
T ss_pred EEecC
Confidence 99853
No 385
>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]
Probab=97.09 E-value=0.0049 Score=53.58 Aligned_cols=93 Identities=17% Similarity=0.240 Sum_probs=60.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcEE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDvV 85 (320)
|||+|+| +|.||..++..+..... + ..-+.++|++. +++.. +.... ... ..+++.+.+.+.|++
T Consensus 1 l~vgiVG-cGaIG~~l~e~v~~~~~-~---~e~v~v~D~~~--ek~~~----~~~~~---~~~--~~s~ide~~~~~Dlv 64 (255)
T COG1712 1 LKVGIVG-CGAIGKFLLELVRDGRV-D---FELVAVYDRDE--EKAKE----LEASV---GRR--CVSDIDELIAEVDLV 64 (255)
T ss_pred CeEEEEe-ccHHHHHHHHHHhcCCc-c---eeEEEEecCCH--HHHHH----HHhhc---CCC--ccccHHHHhhcccee
Confidence 6899999 79999998877665421 1 12567899874 33332 22111 011 114667777999999
Q ss_pred EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEc
Q 020875 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA 131 (320)
Q Consensus 86 i~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~s 131 (320)
+-+|+ .+.+++++..+-+.+ .+++++.++
T Consensus 65 VEaAS----------------~~Av~e~~~~~L~~g-~d~iV~SVG 93 (255)
T COG1712 65 VEAAS----------------PEAVREYVPKILKAG-IDVIVMSVG 93 (255)
T ss_pred eeeCC----------------HHHHHHHhHHHHhcC-CCEEEEech
Confidence 99886 256788888888886 676655554
No 386
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=97.09 E-value=0.0056 Score=52.19 Aligned_cols=141 Identities=15% Similarity=0.125 Sum_probs=85.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC--CCCcceEEeCC-------hh
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF--PLLKGVVATTD-------AV 76 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~--~~~~~v~~~~~-------~~ 76 (320)
....|+||+.-||.+++..|...|. ++...|.+. +.+++.+.+|.-... .+..++....+ ..
T Consensus 15 k~~~vtGg~sGIGrAia~~la~~Ga-------rv~v~dl~~--~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~ 85 (256)
T KOG1200|consen 15 KVAAVTGGSSGIGRAIAQLLAKKGA-------RVAVADLDS--AAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEME 85 (256)
T ss_pred ceeEEecCCchHHHHHHHHHHhcCc-------EEEEeecch--hhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHH
Confidence 4667889999999999999999997 888899864 345555666643211 11122222111 12
Q ss_pred hhcCCCcEEEEeCCCCCCCC------CCHHHHHHhhHHHHHHHHHHHhhh----cCCCeEEEEEcCcchhhHHHHHHHCC
Q 020875 77 EACTGVNIAVMVGGFPRKEG------MERKDVMSKNVSIYKAQASALEQH----AAPNCKVLVVANPANTNALILKEFAP 146 (320)
Q Consensus 77 ~al~~aDvVi~~ag~~~~~~------~~r~~~~~~n~~~~~~i~~~i~~~----~~~~~~viv~snP~~~~~~~~~~~~~ 146 (320)
+.+--.++++.+||+.+..- +++++.+..|+...--..++..+. ......+|++|+=++.+-..-+ +
T Consensus 86 k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQ---t 162 (256)
T KOG1200|consen 86 KSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQ---T 162 (256)
T ss_pred HhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccc---h
Confidence 22345799999999987432 245667788877665554444333 2123478999977765433322 1
Q ss_pred CCCCCc--EEEeeh
Q 020875 147 SIPAKN--ITCLTR 158 (320)
Q Consensus 147 ~~~~~~--i~~~t~ 158 (320)
+|...| ++|.|.
T Consensus 163 nYAAsK~GvIgftk 176 (256)
T KOG1200|consen 163 NYAASKGGVIGFTK 176 (256)
T ss_pred hhhhhcCceeeeeH
Confidence 233333 667665
No 387
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=97.08 E-value=0.0053 Score=57.37 Aligned_cols=61 Identities=20% Similarity=0.229 Sum_probs=45.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDv 84 (320)
.++|+|+| .|.+|+.++..|...|+ +|..+|++.. .. .+. .....++.+++++||+
T Consensus 146 g~~VgIIG-~G~IG~~vA~~L~~~G~-------~V~~~d~~~~--~~----~~~----------~~~~~~l~ell~~aDi 201 (330)
T PRK12480 146 NMTVAIIG-TGRIGAATAKIYAGFGA-------TITAYDAYPN--KD----LDF----------LTYKDSVKEAIKDADI 201 (330)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCC-------EEEEEeCChh--Hh----hhh----------hhccCCHHHHHhcCCE
Confidence 46999999 69999999999988776 8999998641 11 011 0112367889999999
Q ss_pred EEEeC
Q 020875 85 AVMVG 89 (320)
Q Consensus 85 Vi~~a 89 (320)
|+++.
T Consensus 202 Vil~l 206 (330)
T PRK12480 202 ISLHV 206 (330)
T ss_pred EEEeC
Confidence 99876
No 388
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=97.08 E-value=0.0034 Score=58.82 Aligned_cols=72 Identities=21% Similarity=0.319 Sum_probs=44.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDv 84 (320)
++||+|+||+|++|..++..|.++++- ..++..+-..++ .+....+.. .++........+++++|+
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp----~~~l~~l~s~~~----~g~~l~~~g------~~i~v~d~~~~~~~~vDv 66 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFP----VDKLRLLASARS----AGKELSFKG------KELKVEDLTTFDFSGVDI 66 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCC----cceEEEEEcccc----CCCeeeeCC------ceeEEeeCCHHHHcCCCE
Confidence 479999999999999999999887652 136666654321 122222211 122222112245689999
Q ss_pred EEEeCC
Q 020875 85 AVMVGG 90 (320)
Q Consensus 85 Vi~~ag 90 (320)
||++.|
T Consensus 67 Vf~A~g 72 (334)
T PRK14874 67 ALFSAG 72 (334)
T ss_pred EEECCC
Confidence 999875
No 389
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=97.04 E-value=0.00091 Score=59.97 Aligned_cols=74 Identities=24% Similarity=0.319 Sum_probs=51.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcEE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDvV 85 (320)
|+|+|+||+|++|++++..|+..++ +|+..-++. +++.. +.........++.....+..+++|.|.+
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~-------~v~~~~r~~--~~~~~----~~~~v~~~~~d~~~~~~l~~a~~G~~~~ 67 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGH-------EVRAAVRNP--EAAAA----LAGGVEVVLGDLRDPKSLVAGAKGVDGV 67 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCC-------EEEEEEeCH--HHHHh----hcCCcEEEEeccCCHhHHHHHhccccEE
Confidence 6899999999999999999999876 777777653 22221 1100001123444555788899999999
Q ss_pred EEeCCCC
Q 020875 86 VMVGGFP 92 (320)
Q Consensus 86 i~~ag~~ 92 (320)
+++.+..
T Consensus 68 ~~i~~~~ 74 (275)
T COG0702 68 LLISGLL 74 (275)
T ss_pred EEEeccc
Confidence 9987644
No 390
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=97.03 E-value=0.011 Score=54.47 Aligned_cols=64 Identities=14% Similarity=0.155 Sum_probs=44.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCC---C
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTG---V 82 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~---a 82 (320)
|||+++| .|.+|++++..|...|+ +|.++|+++ ++++ .+.+. ......+..+.+++ +
T Consensus 1 m~Ig~IG-lG~mG~~mA~~L~~~g~-------~v~v~dr~~--~~~~----~~~~~------g~~~~~s~~~~~~~~~~a 60 (299)
T PRK12490 1 MKLGLIG-LGKMGGNMAERLREDGH-------EVVGYDVNQ--EAVD----VAGKL------GITARHSLEELVSKLEAP 60 (299)
T ss_pred CEEEEEc-ccHHHHHHHHHHHhCCC-------EEEEEECCH--HHHH----HHHHC------CCeecCCHHHHHHhCCCC
Confidence 5899999 79999999999999886 789999863 3322 12211 12233355555554 6
Q ss_pred cEEEEeC
Q 020875 83 NIAVMVG 89 (320)
Q Consensus 83 DvVi~~a 89 (320)
|+||++.
T Consensus 61 dvVi~~v 67 (299)
T PRK12490 61 RTIWVMV 67 (299)
T ss_pred CEEEEEe
Confidence 8998874
No 391
>PRK06545 prephenate dehydrogenase; Validated
Probab=97.01 E-value=0.0051 Score=58.19 Aligned_cols=68 Identities=22% Similarity=0.259 Sum_probs=45.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcEE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDvV 85 (320)
+||+|+| .|.+|..++..|...|+ ++.++|++++.... ..... . .... ...++..+++++||+|
T Consensus 1 ~~I~iIG-~GliG~siA~~L~~~G~-------~v~i~~~~~~~~~~---~~a~~-~--~~~~--~~~~~~~~~~~~aDlV 64 (359)
T PRK06545 1 RTVLIVG-LGLIGGSLALAIKAAGP-------DVFIIGYDPSAAQL---ARALG-F--GVID--ELAADLQRAAAEADLI 64 (359)
T ss_pred CeEEEEE-eCHHHHHHHHHHHhcCC-------CeEEEEeCCCHHHH---HHHhc-C--CCCc--ccccCHHHHhcCCCEE
Confidence 4799999 69999999999999886 67788876432111 11110 0 0000 1234567788999999
Q ss_pred EEeC
Q 020875 86 VMVG 89 (320)
Q Consensus 86 i~~a 89 (320)
|++.
T Consensus 65 ilav 68 (359)
T PRK06545 65 VLAV 68 (359)
T ss_pred EEeC
Confidence 9985
No 392
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=97.01 E-value=0.0087 Score=53.38 Aligned_cols=74 Identities=24% Similarity=0.270 Sum_probs=43.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEE-EEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCC
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVIL-HMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev-~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~a 82 (320)
.+|||+|.||+|.+|+.++..+.+.+.+ ++ ..+|+... . ..+ .|.......-.-.+.++.++.....++
T Consensus 1 ~~iki~V~Ga~GRMG~~ii~~v~~~~~~------~L~aa~~~~~~-~-~~g--~d~ge~~g~~~~gv~v~~~~~~~~~~~ 70 (266)
T COG0289 1 SMIKVAVAGASGRMGRTLIRAVLEAPDL------ELVAAFDRPGS-L-SLG--SDAGELAGLGLLGVPVTDDLLLVKADA 70 (266)
T ss_pred CCceEEEEcCCChHHHHHHHHHhcCCCc------eEEEEEecCCc-c-ccc--cchhhhccccccCceeecchhhcccCC
Confidence 3689999999999999999998876542 43 46776532 1 111 111111111112333444455666778
Q ss_pred cEEEE
Q 020875 83 NIAVM 87 (320)
Q Consensus 83 DvVi~ 87 (320)
|++|=
T Consensus 71 DV~ID 75 (266)
T COG0289 71 DVLID 75 (266)
T ss_pred CEEEE
Confidence 87775
No 393
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=97.00 E-value=0.0062 Score=57.20 Aligned_cols=74 Identities=19% Similarity=0.326 Sum_probs=46.2
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCC
Q 020875 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (320)
Q Consensus 3 ~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~a 82 (320)
.+++||+|+||+|++|..++..|.++++- ..++.++...++ .++..+... .++....-..++++++
T Consensus 5 ~~~~kVaVvGAtG~vG~eLlrlL~~~~hP----~~~l~~las~rs----aGk~~~~~~------~~~~v~~~~~~~~~~~ 70 (344)
T PLN02383 5 ENGPSVAIVGVTGAVGQEFLSVLTDRDFP----YSSLKMLASARS----AGKKVTFEG------RDYTVEELTEDSFDGV 70 (344)
T ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCC----cceEEEEEccCC----CCCeeeecC------ceeEEEeCCHHHHcCC
Confidence 45689999999999999999988886652 136665543321 222222111 1222322223567899
Q ss_pred cEEEEeCC
Q 020875 83 NIAVMVGG 90 (320)
Q Consensus 83 DvVi~~ag 90 (320)
|+||++++
T Consensus 71 D~vf~a~p 78 (344)
T PLN02383 71 DIALFSAG 78 (344)
T ss_pred CEEEECCC
Confidence 99999875
No 394
>COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=97.00 E-value=0.013 Score=55.12 Aligned_cols=77 Identities=21% Similarity=0.220 Sum_probs=55.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC--------------CCCcce
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF--------------PLLKGV 69 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~--------------~~~~~v 69 (320)
+.++|+|+| -|+||-++|-.++.+|. .|.-+|+++ .+.. .+..... -..+++
T Consensus 8 ~~~~I~ViG-LGYVGLPlA~~fA~~G~-------~ViG~DIn~--~~Vd----~ln~G~~~i~e~~~~~~v~~~v~~g~l 73 (436)
T COG0677 8 MSATIGVIG-LGYVGLPLAAAFASAGF-------KVIGVDINQ--KKVD----KLNRGESYIEEPDLDEVVKEAVESGKL 73 (436)
T ss_pred CceEEEEEc-cccccHHHHHHHHHcCC-------ceEeEeCCH--HHHH----HHhCCcceeecCcHHHHHHHHHhcCCc
Confidence 348999999 89999999999999997 799999974 2221 1111110 013578
Q ss_pred EEeCChhhhcCCCcEEEEeCCCCCCC
Q 020875 70 VATTDAVEACTGVNIAVMVGGFPRKE 95 (320)
Q Consensus 70 ~~~~~~~~al~~aDvVi~~ag~~~~~ 95 (320)
+.+++. +.++.||++|++.-.|-+.
T Consensus 74 raTtd~-~~l~~~dv~iI~VPTPl~~ 98 (436)
T COG0677 74 RATTDP-EELKECDVFIICVPTPLKK 98 (436)
T ss_pred eEecCh-hhcccCCEEEEEecCCcCC
Confidence 888875 5578999999998776543
No 395
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=96.99 E-value=0.0022 Score=53.67 Aligned_cols=101 Identities=13% Similarity=0.146 Sum_probs=66.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHH-----HHHHHhcccCCCCcceEEeCChhh
Q 020875 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG-----VKMELVDAAFPLLKGVVATTDAVE 77 (320)
Q Consensus 3 ~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~-----~~~dl~~~~~~~~~~v~~~~~~~~ 77 (320)
+++|...|+||+|-.|+-+...+.+.+.++ .|+++-+++....+.. ...|++.. .++.+
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FS-----KV~~i~RR~~~d~at~k~v~q~~vDf~Kl-----------~~~a~ 79 (238)
T KOG4039|consen 16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFS-----KVYAILRRELPDPATDKVVAQVEVDFSKL-----------SQLAT 79 (238)
T ss_pred hhccceEEEeccccccHHHHHHHHhcccce-----eEEEEEeccCCCccccceeeeEEechHHH-----------HHHHh
Confidence 346789999999999999999999999886 7777776531111111 11233222 25678
Q ss_pred hcCCCcEEEEeCCCCCC-CCCCHHHHHHhhHHHHHHHHHHHhhhc
Q 020875 78 ACTGVNIAVMVGGFPRK-EGMERKDVMSKNVSIYKAQASALEQHA 121 (320)
Q Consensus 78 al~~aDvVi~~ag~~~~-~~~~r~~~~~~n~~~~~~i~~~i~~~~ 121 (320)
++.+.|+.|++-|..|. .|.+ .++...-+.....++..++.+
T Consensus 80 ~~qg~dV~FcaLgTTRgkaGad--gfykvDhDyvl~~A~~AKe~G 122 (238)
T KOG4039|consen 80 NEQGPDVLFCALGTTRGKAGAD--GFYKVDHDYVLQLAQAAKEKG 122 (238)
T ss_pred hhcCCceEEEeecccccccccC--ceEeechHHHHHHHHHHHhCC
Confidence 88999999998887663 2321 223334455666777776654
No 396
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.97 E-value=0.021 Score=51.81 Aligned_cols=160 Identities=16% Similarity=0.149 Sum_probs=90.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhccc--CCCCcceEEe-------CCh
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA--FPLLKGVVAT-------TDA 75 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~--~~~~~~v~~~-------~~~ 75 (320)
...|+||||++-+|..++.+++++|. .++++|++.. .....+..+.+.. ..+.-+++.. ...
T Consensus 38 g~~vLITGgg~GlGr~ialefa~rg~-------~~vl~Din~~--~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~V 108 (300)
T KOG1201|consen 38 GEIVLITGGGSGLGRLIALEFAKRGA-------KLVLWDINKQ--GNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKV 108 (300)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHhCC-------eEEEEecccc--chHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHH
Confidence 36899999999999999999999986 7999999852 2232333333221 0011111111 124
Q ss_pred hhhcCCCcEEEEeCCCCC-CCC--CCHHH---HHHhhH----HHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHC
Q 020875 76 VEACTGVNIAVMVGGFPR-KEG--MERKD---VMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFA 145 (320)
Q Consensus 76 ~~al~~aDvVi~~ag~~~-~~~--~~r~~---~~~~n~----~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~ 145 (320)
.+...+.|++|.-||+.. ++- .++++ .++.|+ -.+++.++.+.+.+ ++.+|.+++-.+..
T Consensus 109 k~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~--~GHIV~IaS~aG~~-------- 178 (300)
T KOG1201|consen 109 KKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN--NGHIVTIASVAGLF-------- 178 (300)
T ss_pred HHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC--CceEEEehhhhccc--------
Confidence 455678999999999743 222 22322 344554 46788899998864 56677766543321
Q ss_pred CCCCCCcEEEeehhhHHHHHHHHHHHcC-CCCCCeeeeEE
Q 020875 146 PSIPAKNITCLTRLDHNRALGQISEKLN-VQVSDVKNVII 184 (320)
Q Consensus 146 ~~~~~~~i~~~t~ld~~r~~~~~a~~l~-v~~~~v~~~~v 184 (320)
+.+.---|+.|+....-|...+...|. .++.+|+.-.|
T Consensus 179 -g~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv 217 (300)
T KOG1201|consen 179 -GPAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLV 217 (300)
T ss_pred -CCccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEE
Confidence 111101244444444444444444333 35555765543
No 397
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=96.97 E-value=0.0011 Score=58.62 Aligned_cols=74 Identities=15% Similarity=0.268 Sum_probs=46.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhh-cCCCcE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA-CTGVNI 84 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a-l~~aDv 84 (320)
|+|+|+| +|.+|++++..|.+.|+ +|+++|.++ ++++....+-.+.. -...+-+...-+.++ +.++|+
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~~g~-------~Vv~Id~d~--~~~~~~~~~~~~~~-~v~gd~t~~~~L~~agi~~aD~ 69 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSEEGH-------NVVLIDRDE--ERVEEFLADELDTH-VVIGDATDEDVLEEAGIDDADA 69 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhCCC-------ceEEEEcCH--HHHHHHhhhhcceE-EEEecCCCHHHHHhcCCCcCCE
Confidence 6899999 59999999999999998 899999874 33332111101110 000111111124444 678999
Q ss_pred EEEeCC
Q 020875 85 AVMVGG 90 (320)
Q Consensus 85 Vi~~ag 90 (320)
++.+.|
T Consensus 70 vva~t~ 75 (225)
T COG0569 70 VVAATG 75 (225)
T ss_pred EEEeeC
Confidence 998764
No 398
>KOG2666 consensus UDP-glucose/GDP-mannose dehydrogenase [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=96.96 E-value=0.0016 Score=59.15 Aligned_cols=82 Identities=21% Similarity=0.253 Sum_probs=54.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---------CCcceEEeCCh
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---------LLKGVVATTDA 75 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---------~~~~v~~~~~~ 75 (320)
++|||.+| +|+||.+....++..- +..+|.++|.+. .+..++.-|-.-.-.| -..++..+++.
T Consensus 1 ~~kiccig-agyvggptcavia~kc-----p~i~vtvvd~s~--~ri~~wnsd~lpiyepgldevv~~crgknlffstdi 72 (481)
T KOG2666|consen 1 MVKICCIG-AGYVGGPTCAVIALKC-----PDIEVTVVDISV--PRINAWNSDKLPIYEPGLDEVVKQCRGKNLFFSTDI 72 (481)
T ss_pred CceEEEec-CcccCCcchheeeecC-----CceEEEEEecCc--hHhhcccCCCCcccCCCHHHHHHHhcCCceeeecch
Confidence 46999999 5999998776554331 124899999975 3443322111100001 13577888999
Q ss_pred hhhcCCCcEEEEeCCCCCC
Q 020875 76 VEACTGVNIAVMVGGFPRK 94 (320)
Q Consensus 76 ~~al~~aDvVi~~ag~~~~ 94 (320)
+++++.+|+||+....|.+
T Consensus 73 ekai~eadlvfisvntptk 91 (481)
T KOG2666|consen 73 EKAIKEADLVFISVNTPTK 91 (481)
T ss_pred HHHhhhcceEEEEecCCcc
Confidence 9999999999998877653
No 399
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=96.95 E-value=0.016 Score=49.86 Aligned_cols=121 Identities=18% Similarity=0.217 Sum_probs=74.5
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCC------
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTD------ 74 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~------ 74 (320)
|+.....|+||||+..||..++..+.+.|. +|.+..+++ +++.......-+... ...++-...+
T Consensus 1 mk~tgnTiLITGG~sGIGl~lak~f~elgN-------~VIi~gR~e--~~L~e~~~~~p~~~t-~v~Dv~d~~~~~~lve 70 (245)
T COG3967 1 MKTTGNTILITGGASGIGLALAKRFLELGN-------TVIICGRNE--ERLAEAKAENPEIHT-EVCDVADRDSRRELVE 70 (245)
T ss_pred CcccCcEEEEeCCcchhhHHHHHHHHHhCC-------EEEEecCcH--HHHHHHHhcCcchhe-eeecccchhhHHHHHH
Confidence 777778999999999999999999999886 888888874 444432211111100 0112222111
Q ss_pred -hhhhcCCCcEEEEeCCCCCCCCCC-----H---HHHHHhh----HHHHHHHHHHHhhhcCCCeEEEEEcCc
Q 020875 75 -AVEACTGVNIAVMVGGFPRKEGME-----R---KDVMSKN----VSIYKAQASALEQHAAPNCKVLVVANP 133 (320)
Q Consensus 75 -~~~al~~aDvVi~~ag~~~~~~~~-----r---~~~~~~n----~~~~~~i~~~i~~~~~~~~~viv~snP 133 (320)
+.+...+-+++|..||+.+..+.+ . .+.+.-| +..+..+.+.+.+. |++-+|++|+=
T Consensus 71 wLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q--~~a~IInVSSG 140 (245)
T COG3967 71 WLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQ--PEATIINVSSG 140 (245)
T ss_pred HHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhC--CCceEEEeccc
Confidence 223345679999999987643211 1 1223334 34566667777765 57889999853
No 400
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.94 E-value=0.0047 Score=50.73 Aligned_cols=75 Identities=13% Similarity=0.119 Sum_probs=49.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCc
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aD 83 (320)
+.++|+|+| +|.+|..++..|...+. .++.++|++. ++++....++.... .... ..+..+.++++|
T Consensus 18 ~~~~i~iiG-~G~~g~~~a~~l~~~g~------~~v~v~~r~~--~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~D 83 (155)
T cd01065 18 KGKKVLILG-AGGAARAVAYALAELGA------AKIVIVNRTL--EKAKALAERFGELG----IAIA-YLDLEELLAEAD 83 (155)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCC------CEEEEEcCCH--HHHHHHHHHHhhcc----ccee-ecchhhccccCC
Confidence 457999999 59999999999988752 1799999864 33333332222110 0111 234556689999
Q ss_pred EEEEeCCCC
Q 020875 84 IAVMVGGFP 92 (320)
Q Consensus 84 vVi~~ag~~ 92 (320)
+||.+....
T Consensus 84 vvi~~~~~~ 92 (155)
T cd01065 84 LIINTTPVG 92 (155)
T ss_pred EEEeCcCCC
Confidence 999987544
No 401
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=96.93 E-value=0.003 Score=58.08 Aligned_cols=64 Identities=22% Similarity=0.453 Sum_probs=47.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcEE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDvV 85 (320)
+||+|+| .|.+|.+++..|+..|+ +|.++|+++ ++++ ++... ......+..++++++|+|
T Consensus 2 ~~Ig~IG-lG~mG~~mA~~l~~~G~-------~V~v~d~~~--~~~~----~~~~~------g~~~~~s~~~~~~~aDvV 61 (296)
T PRK15461 2 AAIAFIG-LGQMGSPMASNLLKQGH-------QLQVFDVNP--QAVD----ALVDK------GATPAASPAQAAAGAEFV 61 (296)
T ss_pred CeEEEEe-eCHHHHHHHHHHHHCCC-------eEEEEcCCH--HHHH----HHHHc------CCcccCCHHHHHhcCCEE
Confidence 4899999 79999999999999887 899999874 3332 22211 112234667788999999
Q ss_pred EEeC
Q 020875 86 VMVG 89 (320)
Q Consensus 86 i~~a 89 (320)
|++.
T Consensus 62 i~~v 65 (296)
T PRK15461 62 ITML 65 (296)
T ss_pred EEec
Confidence 9985
No 402
>PRK08507 prephenate dehydrogenase; Validated
Probab=96.92 E-value=0.0094 Score=54.16 Aligned_cols=66 Identities=12% Similarity=0.118 Sum_probs=42.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcEE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDvV 85 (320)
|||+|+| .|.+|+.++..|...|+. .+|..+|+++ +.++. +.+... .....+..+ +.++|+|
T Consensus 1 m~I~iIG-~G~mG~sla~~l~~~g~~-----~~v~~~d~~~--~~~~~----~~~~g~-----~~~~~~~~~-~~~aD~V 62 (275)
T PRK08507 1 MKIGIIG-LGLMGGSLGLALKEKGLI-----SKVYGYDHNE--LHLKK----ALELGL-----VDEIVSFEE-LKKCDVI 62 (275)
T ss_pred CEEEEEc-cCHHHHHHHHHHHhcCCC-----CEEEEEcCCH--HHHHH----HHHCCC-----CcccCCHHH-HhcCCEE
Confidence 5899999 699999999999988752 2688889863 22221 111110 001123334 4469999
Q ss_pred EEeC
Q 020875 86 VMVG 89 (320)
Q Consensus 86 i~~a 89 (320)
|++.
T Consensus 63 ilav 66 (275)
T PRK08507 63 FLAI 66 (275)
T ss_pred EEeC
Confidence 9985
No 403
>PLN02712 arogenate dehydrogenase
Probab=96.91 E-value=0.015 Score=59.36 Aligned_cols=65 Identities=15% Similarity=0.244 Sum_probs=44.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhc-CCC
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC-TGV 82 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al-~~a 82 (320)
+++||+|+| .|.+|..++..|...|+ +|..+|++. ... .+.++ .+....+..+.+ +++
T Consensus 51 ~~~kIgIIG-~G~mG~slA~~L~~~G~-------~V~~~dr~~--~~~--~A~~~---------Gv~~~~d~~e~~~~~a 109 (667)
T PLN02712 51 TQLKIAIIG-FGNYGQFLAKTLISQGH-------TVLAHSRSD--HSL--AARSL---------GVSFFLDPHDLCERHP 109 (667)
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHH--HHHHc---------CCEEeCCHHHHhhcCC
Confidence 468999999 79999999999998886 789999863 111 11111 122233555544 579
Q ss_pred cEEEEeC
Q 020875 83 NIAVMVG 89 (320)
Q Consensus 83 DvVi~~a 89 (320)
|+||++.
T Consensus 110 DvViLav 116 (667)
T PLN02712 110 DVILLCT 116 (667)
T ss_pred CEEEEcC
Confidence 9999985
No 404
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=96.89 E-value=0.0059 Score=57.62 Aligned_cols=74 Identities=14% Similarity=0.171 Sum_probs=43.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDv 84 (320)
|+||+|+||+|++|..+...|++...+. ..+++++.... ..+....+.... ..+....+ .+.++++|+
T Consensus 1 m~~VAIVGATG~vG~ell~llL~~~~f~---~~~l~~~ss~~----sg~~~~~f~g~~----~~v~~~~~-~~~~~~~Di 68 (369)
T PRK06598 1 MKKVGFVGWRGMVGSVLMQRMVEENDFD---LIEPVFFSTSQ----AGGAAPSFGGKE----GTLQDAFD-IDALKKLDI 68 (369)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHhCCCCC---cCcEEEecchh----hCCcccccCCCc----ceEEecCC-hhHhcCCCE
Confidence 3799999999999999998666554442 12577765431 111111221110 11111112 356789999
Q ss_pred EEEeCC
Q 020875 85 AVMVGG 90 (320)
Q Consensus 85 Vi~~ag 90 (320)
||++++
T Consensus 69 vf~a~~ 74 (369)
T PRK06598 69 IITCQG 74 (369)
T ss_pred EEECCC
Confidence 999875
No 405
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=96.87 E-value=0.0098 Score=55.14 Aligned_cols=103 Identities=17% Similarity=0.216 Sum_probs=63.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCc
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aD 83 (320)
..+||+|+| +|.+|..++..|...+.. +|.++|++. +++...+..+.. .+....++.+++.++|
T Consensus 177 ~~~~V~ViG-aG~iG~~~a~~L~~~g~~------~V~v~~r~~--~ra~~la~~~g~-------~~~~~~~~~~~l~~aD 240 (311)
T cd05213 177 KGKKVLVIG-AGEMGELAAKHLAAKGVA------EITIANRTY--ERAEELAKELGG-------NAVPLDELLELLNEAD 240 (311)
T ss_pred cCCEEEEEC-cHHHHHHHHHHHHHcCCC------EEEEEeCCH--HHHHHHHHHcCC-------eEEeHHHHHHHHhcCC
Confidence 458999999 599999999998876542 789999864 333333322211 1222234677789999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhh
Q 020875 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTN 137 (320)
Q Consensus 84 vVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~ 137 (320)
+||.+.+.+.. . .......+.. .. ++..++-+++|-|+-
T Consensus 241 vVi~at~~~~~-----~-------~~~~~~~~~~--~~-~~~~viDlavPrdi~ 279 (311)
T cd05213 241 VVISATGAPHY-----A-------KIVERAMKKR--SG-KPRLIVDLAVPRDIE 279 (311)
T ss_pred EEEECCCCCch-----H-------HHHHHHHhhC--CC-CCeEEEEeCCCCCCc
Confidence 99998775531 0 1111111111 11 345677899998754
No 406
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=96.87 E-value=0.019 Score=52.97 Aligned_cols=64 Identities=19% Similarity=0.293 Sum_probs=43.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcC---CC
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT---GV 82 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~---~a 82 (320)
|||+|+| .|.+|++++..|+..|+ +|.++|+++ ++++. +.+. ......+..+.++ ++
T Consensus 1 m~Ig~IG-lG~MG~~mA~~L~~~g~-------~v~v~dr~~--~~~~~----~~~~------g~~~~~~~~e~~~~~~~~ 60 (301)
T PRK09599 1 MQLGMIG-LGRMGGNMARRLLRGGH-------EVVGYDRNP--EAVEA----LAEE------GATGADSLEELVAKLPAP 60 (301)
T ss_pred CEEEEEc-ccHHHHHHHHHHHHCCC-------eEEEEECCH--HHHHH----HHHC------CCeecCCHHHHHhhcCCC
Confidence 5899999 79999999999999887 899999863 33321 2211 1222234444444 46
Q ss_pred cEEEEeC
Q 020875 83 NIAVMVG 89 (320)
Q Consensus 83 DvVi~~a 89 (320)
|+||++.
T Consensus 61 dvvi~~v 67 (301)
T PRK09599 61 RVVWLMV 67 (301)
T ss_pred CEEEEEe
Confidence 9988874
No 407
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=96.85 E-value=0.0032 Score=59.91 Aligned_cols=36 Identities=22% Similarity=0.350 Sum_probs=29.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecC
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP 45 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~ 45 (320)
+++||+|+||+|++|..++..|.++..+ +|.++..+
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~------el~~l~s~ 72 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDF------EITVMTAD 72 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCC------eEEEEECh
Confidence 4579999999999999999998887543 88887764
No 408
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=96.79 E-value=0.011 Score=55.66 Aligned_cols=34 Identities=24% Similarity=0.389 Sum_probs=28.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEec
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDI 44 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~ 44 (320)
++||+|+||+|++|+.++..|.....+ +++++..
T Consensus 3 ~~~V~I~GatG~iG~~l~~~L~~~p~~------el~~~~~ 36 (349)
T PRK08664 3 KLKVGILGATGMVGQRFVQLLANHPWF------EVTALAA 36 (349)
T ss_pred CcEEEEECCCCHHHHHHHHHHHcCCCc------eEEEEEc
Confidence 579999999999999999988875543 7887744
No 409
>PTZ00431 pyrroline carboxylate reductase; Provisional
Probab=96.78 E-value=0.017 Score=52.07 Aligned_cols=63 Identities=21% Similarity=0.200 Sum_probs=43.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDv 84 (320)
.|||+|+| +|.+|++++..|.+.+... ..++..+|+++ ++. .+....+..++++++|+
T Consensus 3 ~mkI~iIG-~G~mG~ai~~~l~~~~~~~---~~~i~~~~~~~--~~~----------------~~~~~~~~~~~~~~~D~ 60 (260)
T PTZ00431 3 NIRVGFIG-LGKMGSALAYGIENSNIIG---KENIYYHTPSK--KNT----------------PFVYLQSNEELAKTCDI 60 (260)
T ss_pred CCEEEEEC-ccHHHHHHHHHHHhCCCCC---cceEEEECCCh--hcC----------------CeEEeCChHHHHHhCCE
Confidence 47999999 6999999999999877532 12588888753 111 01122355566789999
Q ss_pred EEEeC
Q 020875 85 AVMVG 89 (320)
Q Consensus 85 Vi~~a 89 (320)
||++.
T Consensus 61 Vilav 65 (260)
T PTZ00431 61 IVLAV 65 (260)
T ss_pred EEEEe
Confidence 99884
No 410
>PLN00015 protochlorophyllide reductase
Probab=96.72 E-value=0.0078 Score=55.49 Aligned_cols=116 Identities=10% Similarity=0.027 Sum_probs=64.5
Q ss_pred EEEcCCChhHHHHHHHHHhcC-cCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC---CCcceEEeCChhhh------
Q 020875 9 LVTGAAGQIGYALVPMIARGV-MLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA------ 78 (320)
Q Consensus 9 ~IiGA~G~vG~~la~~L~~~~-~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~---~~~~v~~~~~~~~a------ 78 (320)
+||||++.+|.+++..|+++| . .|++.++++ +++.....++...... ...++....+..++
T Consensus 1 lITGas~GIG~aia~~l~~~G~~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 71 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKW-------HVVMACRDF--LKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRR 71 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCC-------EEEEEeCCH--HHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHh
Confidence 489999999999999999988 5 788888763 3333332233211100 01112111111111
Q ss_pred -cCCCcEEEEeCCCCCC----CCCCH---HHHHHhhHHH----HHHHHHHHhhhcCCCeEEEEEcCc
Q 020875 79 -CTGVNIAVMVGGFPRK----EGMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANP 133 (320)
Q Consensus 79 -l~~aDvVi~~ag~~~~----~~~~r---~~~~~~n~~~----~~~i~~~i~~~~~~~~~viv~snP 133 (320)
....|++|+.||+... ...+. ...+..|+.. ++.+++.+++.....+++|++|+-
T Consensus 72 ~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~ 138 (308)
T PLN00015 72 SGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSI 138 (308)
T ss_pred cCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEecc
Confidence 2357999999987421 11222 2356677665 455566665432113577777653
No 411
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=96.69 E-value=0.014 Score=54.61 Aligned_cols=75 Identities=24% Similarity=0.281 Sum_probs=46.5
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcC
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT 80 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~ 80 (320)
|. +.+||+|+||+|++|..+...|.++.+- ..++.++.... -.|....+.. .++.+......++.
T Consensus 1 ~~-~~~~vaIvGATG~vG~ellrlL~~~~hP----~~~l~~laS~~----saG~~~~~~~------~~~~v~~~~~~~~~ 65 (336)
T PRK08040 1 MS-EGWNIALLGATGAVGEALLELLAERQFP----VGELYALASEE----SAGETLRFGG------KSVTVQDAAEFDWS 65 (336)
T ss_pred CC-CCCEEEEEccCCHHHHHHHHHHhcCCCC----ceEEEEEEccC----cCCceEEECC------cceEEEeCchhhcc
Confidence 53 5689999999999999999998886442 23777775432 1222222211 13333321233457
Q ss_pred CCcEEEEeCC
Q 020875 81 GVNIAVMVGG 90 (320)
Q Consensus 81 ~aDvVi~~ag 90 (320)
++|+||++++
T Consensus 66 ~~Dvvf~a~p 75 (336)
T PRK08040 66 QAQLAFFVAG 75 (336)
T ss_pred CCCEEEECCC
Confidence 8999999864
No 412
>PRK08269 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.68 E-value=0.023 Score=52.70 Aligned_cols=103 Identities=10% Similarity=0.121 Sum_probs=61.3
Q ss_pred hHHHHHHHHHhcCcCCCCCCeEEEEEecCCcc--------chhHHHHHHHhc-----ccC------CCCcceEEeCC--h
Q 020875 17 IGYALVPMIARGVMLGTDQPVILHMLDIPPAA--------EALNGVKMELVD-----AAF------PLLKGVVATTD--A 75 (320)
Q Consensus 17 vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~--------~~~~~~~~dl~~-----~~~------~~~~~v~~~~~--~ 75 (320)
+|+.++..++..|+ +|+|+|.++.. ++.........+ ... ....+++.+++ .
T Consensus 1 MG~giA~~~a~~G~-------~V~l~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 73 (314)
T PRK08269 1 MGQGIALAFAFAGH-------DVTLIDFKPRDAAGWRALDAEARAEIERTLAALVALGRIDAAQADAVLARIAVVARDGA 73 (314)
T ss_pred CcHHHHHHHHhCCC-------eEEEEeCCcccchhhHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEeecCcch
Confidence 47788888999897 89999997521 011111111111 000 01246666654 6
Q ss_pred hhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHH
Q 020875 76 VEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK 142 (320)
Q Consensus 76 ~~al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~ 142 (320)
++++++||+||.+.- .+.+.-+.+...+.+.++|+++ +.||........+.
T Consensus 74 ~~a~~~aD~ViEav~--------------E~~~~K~~~f~~l~~~~~~~~i--laSntS~~~~~~la 124 (314)
T PRK08269 74 ADALADADLVFEAVP--------------EVLDAKREALRWLGRHVDADAI--IASTTSTFLVTDLQ 124 (314)
T ss_pred HHHhccCCEEEECCc--------------CCHHHHHHHHHHHHhhCCCCcE--EEEccccCCHHHHH
Confidence 688999999998751 2234456677778888766654 37776654433333
No 413
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=96.65 E-value=0.014 Score=54.27 Aligned_cols=66 Identities=12% Similarity=0.009 Sum_probs=45.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCc
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aD 83 (320)
+.+||+|+| .|.+|.+++..|...|+ +|++.+++.. +....+.+ .. +.. .+..+++++||
T Consensus 16 ~gktIgIIG-~GsmG~AlA~~L~~sG~-------~Vvv~~r~~~--~s~~~A~~--~G-------~~~-~s~~eaa~~AD 75 (330)
T PRK05479 16 KGKKVAIIG-YGSQGHAHALNLRDSGV-------DVVVGLREGS--KSWKKAEA--DG-------FEV-LTVAEAAKWAD 75 (330)
T ss_pred CCCEEEEEe-eHHHHHHHHHHHHHCCC-------EEEEEECCch--hhHHHHHH--CC-------Cee-CCHHHHHhcCC
Confidence 357999999 69999999999999887 7777776431 11111111 11 112 26778899999
Q ss_pred EEEEeC
Q 020875 84 IAVMVG 89 (320)
Q Consensus 84 vVi~~a 89 (320)
+|+++.
T Consensus 76 VVvLaV 81 (330)
T PRK05479 76 VIMILL 81 (330)
T ss_pred EEEEcC
Confidence 999985
No 414
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=96.63 E-value=0.0023 Score=57.92 Aligned_cols=109 Identities=15% Similarity=0.256 Sum_probs=68.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHhc----CcCCCCCCeEEEEEecCCc----cchhHHHHHHHhcccCCCCcceEEeCChhh
Q 020875 6 VRVLVTGAAGQIGYALVPMIARG----VMLGTDQPVILHMLDIPPA----AEALNGVKMELVDAAFPLLKGVVATTDAVE 77 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~----~~~~~~~~~ev~l~D~~~~----~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~ 77 (320)
.||++.| +|..|..++..|... |+-...-...+.++|++.- +..+......+.+.. .. ....++.+
T Consensus 26 ~~iv~~G-AGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~----~~-~~~~~L~e 99 (279)
T cd05312 26 QRILFLG-AGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKD----EE-KEGKSLLE 99 (279)
T ss_pred cEEEEEC-cCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhc----Cc-ccCCCHHH
Confidence 6999999 599999999888765 6411011127899997521 111222222222211 00 12357999
Q ss_pred hcC--CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcch
Q 020875 78 ACT--GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN 135 (320)
Q Consensus 78 al~--~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~ 135 (320)
+++ ++|++|=+.+.+ | -+.+++++.|.+++ ++.+|+-.|||..
T Consensus 100 ~i~~v~ptvlIG~S~~~---g-----------~ft~evv~~Ma~~~-~~PIIFaLSNPt~ 144 (279)
T cd05312 100 VVKAVKPTVLIGLSGVG---G-----------AFTEEVVRAMAKSN-ERPIIFALSNPTS 144 (279)
T ss_pred HHHhcCCCEEEEeCCCC---C-----------CCCHHHHHHHHhcC-CCCEEEECCCcCC
Confidence 999 899988765433 2 13477889999888 6778888899974
No 415
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.61 E-value=0.047 Score=50.62 Aligned_cols=162 Identities=15% Similarity=0.117 Sum_probs=96.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCC-----------CcceEE-e
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-----------LKGVVA-T 72 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~-----------~~~v~~-~ 72 (320)
.+-+.||||+..+|...+..|+.+|. +|++..++. ++.+....++....... ...+.. .
T Consensus 35 ~~~~vVTGansGIG~eta~~La~~Ga-------~Vv~~~R~~--~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa 105 (314)
T KOG1208|consen 35 GKVALVTGATSGIGFETARELALRGA-------HVVLACRNE--ERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFA 105 (314)
T ss_pred CcEEEEECCCCchHHHHHHHHHhCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHH
Confidence 35788999999999999999999995 899988874 44555555555421110 011111 1
Q ss_pred CChhhhcCCCcEEEEeCCCCCCCCC---CH-HHHHHhhH----HHHHHHHHHHhhhcCCCeEEEEEcCcch----hhHHH
Q 020875 73 TDAVEACTGVNIAVMVGGFPRKEGM---ER-KDVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPAN----TNALI 140 (320)
Q Consensus 73 ~~~~~al~~aDvVi~~ag~~~~~~~---~r-~~~~~~n~----~~~~~i~~~i~~~~~~~~~viv~snP~~----~~~~~ 140 (320)
....+....-|+.|.-||+...+.. +. +..+..|. -.+..+.+.+++.. | +++|++|+-.. -+..+
T Consensus 106 ~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-~-~RIV~vsS~~~~~~~~~~~l 183 (314)
T KOG1208|consen 106 EEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-P-SRIVNVSSILGGGKIDLKDL 183 (314)
T ss_pred HHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCC-C-CCEEEEcCccccCccchhhc
Confidence 1122334567999999998543321 11 12344453 35666777777765 4 78888886332 01111
Q ss_pred HHHHCCCCCCCcEEEeehhhHHHHHHHHHHHcCCCCCCee
Q 020875 141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (320)
Q Consensus 141 ~~~~~~~~~~~~i~~~t~ld~~r~~~~~a~~l~v~~~~v~ 180 (320)
-.+..+.+...+.|+.+.+...-+...+++++.- +|.
T Consensus 184 ~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~---~V~ 220 (314)
T KOG1208|consen 184 SGEKAKLYSSDAAYALSKLANVLLANELAKRLKK---GVT 220 (314)
T ss_pred cchhccCccchhHHHHhHHHHHHHHHHHHHHhhc---Cce
Confidence 1111111333335778888888888889998875 555
No 416
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.59 E-value=0.0012 Score=62.88 Aligned_cols=76 Identities=22% Similarity=0.333 Sum_probs=44.6
Q ss_pred EEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC-CCcceEEeCChhhhcCCCcEEE
Q 020875 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVATTDAVEACTGVNIAV 86 (320)
Q Consensus 8 I~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~-~~~~v~~~~~~~~al~~aDvVi 86 (320)
|+|+|| |++|+.++..|++.... .+|++.|++. ++++.....+...... ..-++....++.+.++++|+||
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~-----~~v~va~r~~--~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVi 72 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPF-----EEVTVADRNP--EKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVI 72 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE------EEEEEESSH--HHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEE
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCC-----CcEEEEECCH--HHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEE
Confidence 789997 99999999999987642 1799999974 4444333222111000 0011111223667889999999
Q ss_pred EeCCC
Q 020875 87 MVGGF 91 (320)
Q Consensus 87 ~~ag~ 91 (320)
++++.
T Consensus 73 n~~gp 77 (386)
T PF03435_consen 73 NCAGP 77 (386)
T ss_dssp E-SSG
T ss_pred ECCcc
Confidence 99874
No 417
>PRK06476 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.58 E-value=0.026 Score=50.72 Aligned_cols=69 Identities=10% Similarity=0.068 Sum_probs=45.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcEE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDvV 85 (320)
|||+|+| +|.+|++++..|...++. ...+.++|+++ ++++.....+ ..+....+..+.++++|+|
T Consensus 1 m~IgiIG-~G~mG~aia~~L~~~g~~----~~~i~v~~r~~--~~~~~l~~~~--------~~~~~~~~~~~~~~~aDvV 65 (258)
T PRK06476 1 MKIGFIG-TGAITEAMVTGLLTSPAD----VSEIIVSPRNA--QIAARLAERF--------PKVRIAKDNQAVVDRSDVV 65 (258)
T ss_pred CeEEEEC-cCHHHHHHHHHHHhCCCC----hheEEEECCCH--HHHHHHHHHc--------CCceEeCCHHHHHHhCCEE
Confidence 4899999 799999999999987741 12567788753 3332211111 0123344666778899999
Q ss_pred EEeC
Q 020875 86 VMVG 89 (320)
Q Consensus 86 i~~a 89 (320)
|++.
T Consensus 66 ilav 69 (258)
T PRK06476 66 FLAV 69 (258)
T ss_pred EEEe
Confidence 9986
No 418
>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]
Probab=96.56 E-value=0.018 Score=51.92 Aligned_cols=95 Identities=19% Similarity=0.204 Sum_probs=60.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDv 84 (320)
++||+++| +|.+|++++..|+..+... ..+|.+.++++ ++.. ++.+.. +. . .+++..++...+|+
T Consensus 1 ~~~IgfIG-~G~Mg~Ai~~gl~~~g~~~---~~~I~v~~~~~--e~~~----~l~~~~-g~--~--~~~~~~~~~~~adv 65 (266)
T COG0345 1 MMKIGFIG-AGNMGEAILSGLLKSGALP---PEEIIVTNRSE--EKRA----ALAAEY-GV--V--TTTDNQEAVEEADV 65 (266)
T ss_pred CceEEEEc-cCHHHHHHHHHHHhcCCCC---cceEEEeCCCH--HHHH----HHHHHc-CC--c--ccCcHHHHHhhCCE
Confidence 57999999 6999999999999988422 13788888763 3332 222211 11 1 14566788899999
Q ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEc
Q 020875 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA 131 (320)
Q Consensus 85 Vi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~s 131 (320)
||++.- | +.+.++++.++... ++..+|.+.
T Consensus 66 v~LavK----P------------q~~~~vl~~l~~~~-~~~lvISia 95 (266)
T COG0345 66 VFLAVK----P------------QDLEEVLSKLKPLT-KDKLVISIA 95 (266)
T ss_pred EEEEeC----h------------HhHHHHHHHhhccc-CCCEEEEEe
Confidence 999862 2 23456666776532 444455554
No 419
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=96.52 E-value=0.017 Score=54.33 Aligned_cols=34 Identities=18% Similarity=0.359 Sum_probs=27.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEE-EEecC
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILH-MLDIP 45 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~-l~D~~ 45 (320)
+||+|+||+|++|..++..|.+.... +++ +++.+
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~------el~~l~~s~ 35 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEV------EITYLVSSR 35 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCc------eEEEEeccc
Confidence 58999999999999999998865432 676 55654
No 420
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.52 E-value=0.019 Score=55.88 Aligned_cols=117 Identities=20% Similarity=0.221 Sum_probs=66.2
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcC
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT 80 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~ 80 (320)
|..+.++|.|+|+ |.+|..++..|++.|+ +|+++|.+.. +.+.....++.... .++.......+...
T Consensus 1 ~~~~~k~v~iiG~-g~~G~~~A~~l~~~G~-------~V~~~d~~~~-~~~~~~~~~l~~~~----~~~~~~~~~~~~~~ 67 (450)
T PRK14106 1 MELKGKKVLVVGA-GVSGLALAKFLKKLGA-------KVILTDEKEE-DQLKEALEELGELG----IELVLGEYPEEFLE 67 (450)
T ss_pred CCcCCCEEEEECC-CHHHHHHHHHHHHCCC-------EEEEEeCCch-HHHHHHHHHHHhcC----CEEEeCCcchhHhh
Confidence 6556689999995 7799999999999997 8999998632 22222222232111 11211111223457
Q ss_pred CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcc
Q 020875 81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPA 134 (320)
Q Consensus 81 ~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~ 134 (320)
++|+||.++|.+... ......-..++++...+....+.. + .++|-+|.+.
T Consensus 68 ~~d~vv~~~g~~~~~-~~~~~a~~~~i~~~~~~~~~~~~~--~-~~vI~ITGS~ 117 (450)
T PRK14106 68 GVDLVVVSPGVPLDS-PPVVQAHKKGIEVIGEVELAYRFS--K-APIVAITGTN 117 (450)
T ss_pred cCCEEEECCCCCCCC-HHHHHHHHCCCcEEeHHHHHHhhc--C-CCEEEEeCCC
Confidence 899999998875311 111112234555555444433322 2 3466776655
No 421
>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial.
Probab=96.51 E-value=0.016 Score=54.54 Aligned_cols=72 Identities=13% Similarity=0.143 Sum_probs=44.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeC-ChhhhcCCCcE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT-DAVEACTGVNI 84 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~-~~~~al~~aDv 84 (320)
+||+|+||+|.||+.+...|.+...+. ..+++++...+ ..+....+.. ....+.. +..++++++|+
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp---~~~~~~~ss~~----s~g~~~~f~~------~~~~v~~~~~~~~~~~vDi 67 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFD---AIRPVFFSTSQ----LGQAAPSFGG------TTGTLQDAFDIDALKALDI 67 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCc---cccEEEEEchh----hCCCcCCCCC------CcceEEcCcccccccCCCE
Confidence 489999999999999999888443332 13677777532 2222221111 1122221 22247899999
Q ss_pred EEEeCC
Q 020875 85 AVMVGG 90 (320)
Q Consensus 85 Vi~~ag 90 (320)
||+++|
T Consensus 68 vffa~g 73 (366)
T TIGR01745 68 IITCQG 73 (366)
T ss_pred EEEcCC
Confidence 999886
No 422
>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e.g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B ....
Probab=96.50 E-value=0.016 Score=51.82 Aligned_cols=110 Identities=17% Similarity=0.262 Sum_probs=68.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHhc----CcCCCCCCeEEEEEecCC----ccchhHHHHHHHhcccCCCCcceEEeCChhh
Q 020875 6 VRVLVTGAAGQIGYALVPMIARG----VMLGTDQPVILHMLDIPP----AAEALNGVKMELVDAAFPLLKGVVATTDAVE 77 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~----~~~~~~~~~ev~l~D~~~----~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~ 77 (320)
.||++.| +|..|..++..|+.. |+-..+-...+.++|++. +++.+......+.+...+ .....++.+
T Consensus 26 ~riv~~G-AGsAg~gia~ll~~~~~~~G~~~~eA~~~i~lvD~~Gll~~~r~~l~~~~~~~a~~~~~----~~~~~~L~e 100 (255)
T PF03949_consen 26 QRIVFFG-AGSAGIGIARLLVAAMVREGLSEEEARKRIWLVDSKGLLTDDREDLNPHKKPFARKTNP----EKDWGSLLE 100 (255)
T ss_dssp -EEEEEB--SHHHHHHHHHHHHHHHCTTS-HHHHHTTEEEEETTEEEBTTTSSHSHHHHHHHBSSST----TT--SSHHH
T ss_pred cEEEEeC-CChhHHHHHHHHHHHHHHhcCCHHHHhccEEEEeccceEeccCccCChhhhhhhccCcc----cccccCHHH
Confidence 5999999 599999999988766 652000002699999752 112222222233222211 111147899
Q ss_pred hcCCC--cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcch
Q 020875 78 ACTGV--NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN 135 (320)
Q Consensus 78 al~~a--DvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~ 135 (320)
+++++ |++|=+.+.+. -+.+++++.|.+++ +..+++-.|||..
T Consensus 101 av~~~kPtvLIG~S~~~g--------------~ft~evv~~Ma~~~-erPIIF~LSNPt~ 145 (255)
T PF03949_consen 101 AVKGAKPTVLIGLSGQGG--------------AFTEEVVRAMAKHN-ERPIIFPLSNPTP 145 (255)
T ss_dssp HHHCH--SEEEECSSSTT--------------SS-HHHHHHCHHHS-SSEEEEE-SSSCG
T ss_pred HHHhcCCCEEEEecCCCC--------------cCCHHHHHHHhccC-CCCEEEECCCCCC
Confidence 99999 99988766432 13478899999998 6788888899975
No 423
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=96.49 E-value=0.023 Score=55.88 Aligned_cols=73 Identities=10% Similarity=0.054 Sum_probs=47.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcC---
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT--- 80 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~--- 80 (320)
+.++|++|| .|.+|++++..|+..|+ +|.++|++. ++.+.......... ...+....+..++.+
T Consensus 5 ~~~~IG~IG-LG~MG~~mA~nL~~~G~-------~V~V~NRt~--~k~~~l~~~~~~~G---a~~~~~a~s~~e~v~~l~ 71 (493)
T PLN02350 5 ALSRIGLAG-LAVMGQNLALNIAEKGF-------PISVYNRTT--SKVDETVERAKKEG---NLPLYGFKDPEDFVLSIQ 71 (493)
T ss_pred CCCCEEEEe-eHHHHHHHHHHHHhCCC-------eEEEECCCH--HHHHHHHHhhhhcC---CcccccCCCHHHHHhcCC
Confidence 467999999 89999999999999997 899999864 33332111011000 011222334445444
Q ss_pred CCcEEEEeC
Q 020875 81 GVNIAVMVG 89 (320)
Q Consensus 81 ~aDvVi~~a 89 (320)
.+|+||.+.
T Consensus 72 ~~dvIi~~v 80 (493)
T PLN02350 72 KPRSVIILV 80 (493)
T ss_pred CCCEEEEEC
Confidence 599999975
No 424
>PRK09620 hypothetical protein; Provisional
Probab=96.47 E-value=0.0057 Score=54.12 Aligned_cols=34 Identities=21% Similarity=0.193 Sum_probs=29.8
Q ss_pred CCEEEEEcCC----------------ChhHHHHHHHHHhcCcCCCCCCeEEEEEecC
Q 020875 5 PVRVLVTGAA----------------GQIGYALVPMIARGVMLGTDQPVILHMLDIP 45 (320)
Q Consensus 5 ~~kI~IiGA~----------------G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~ 45 (320)
.+||+||+|. ||+|++++..|+.+|. +|+++|..
T Consensus 3 gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga-------~V~li~g~ 52 (229)
T PRK09620 3 GKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGA-------HVIYLHGY 52 (229)
T ss_pred CCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCC-------eEEEEeCC
Confidence 4699999876 9999999999999997 89988863
No 425
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=96.46 E-value=0.036 Score=50.12 Aligned_cols=69 Identities=19% Similarity=0.250 Sum_probs=44.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeE-EEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCc
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVI-LHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~e-v~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aD 83 (320)
+|||+|+| +|.+|..++..|...+. + .+ +.++|++. +++.. +.+.. .....+++.+.+.++|
T Consensus 1 mmrIgIIG-~G~iG~~ia~~l~~~~~-~----~elv~v~d~~~--~~a~~----~a~~~-----~~~~~~~~~ell~~~D 63 (265)
T PRK13304 1 MLKIGIVG-CGAIASLITKAILSGRI-N----AELYAFYDRNL--EKAEN----LASKT-----GAKACLSIDELVEDVD 63 (265)
T ss_pred CCEEEEEC-ccHHHHHHHHHHHcCCC-C----eEEEEEECCCH--HHHHH----HHHhc-----CCeeECCHHHHhcCCC
Confidence 47999999 69999999988876531 1 14 45788763 33322 21110 1223346666678999
Q ss_pred EEEEeCC
Q 020875 84 IAVMVGG 90 (320)
Q Consensus 84 vVi~~ag 90 (320)
+|++++.
T Consensus 64 vVvi~a~ 70 (265)
T PRK13304 64 LVVECAS 70 (265)
T ss_pred EEEEcCC
Confidence 9999863
No 426
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=96.45 E-value=0.011 Score=53.76 Aligned_cols=69 Identities=22% Similarity=0.251 Sum_probs=44.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhc--CcCCCCCCeEEE-EEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcC
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARG--VMLGTDQPVILH-MLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT 80 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~--~~~~~~~~~ev~-l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~ 80 (320)
+++||+|+| .|.+|+.++..|... ++ ++. ++|+++ ++.+.....+. .....+++.+.+.
T Consensus 5 ~~irIGIIG-~G~IG~~~a~~L~~~~~~~-------el~aV~dr~~--~~a~~~a~~~g--------~~~~~~~~eell~ 66 (271)
T PRK13302 5 PELRVAIAG-LGAIGKAIAQALDRGLPGL-------TLSAVAVRDP--QRHADFIWGLR--------RPPPVVPLDQLAT 66 (271)
T ss_pred CeeEEEEEC-ccHHHHHHHHHHHhcCCCe-------EEEEEECCCH--HHHHHHHHhcC--------CCcccCCHHHHhc
Confidence 358999999 799999999888763 33 554 778763 33332221111 0111235667778
Q ss_pred CCcEEEEeCC
Q 020875 81 GVNIAVMVGG 90 (320)
Q Consensus 81 ~aDvVi~~ag 90 (320)
++|+|++++.
T Consensus 67 ~~D~Vvi~tp 76 (271)
T PRK13302 67 HADIVVEAAP 76 (271)
T ss_pred CCCEEEECCC
Confidence 9999999874
No 427
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut
Probab=96.45 E-value=0.0036 Score=55.82 Aligned_cols=110 Identities=14% Similarity=0.130 Sum_probs=68.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcC-C---CCCCeEEEEEecCC----ccchhHHHHHHHhcccCCCCcceEEeCChhh
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVML-G---TDQPVILHMLDIPP----AAEALNGVKMELVDAAFPLLKGVVATTDAVE 77 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~-~---~~~~~ev~l~D~~~----~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~ 77 (320)
.||++.| +|..|..++..|...+.. | ..-...++++|... ++..+......+.+. ..+-....++.+
T Consensus 26 ~riv~~G-AGsAg~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~Gll~~~r~~l~~~~~~~~~~----~~~~~~~~~L~e 100 (254)
T cd00762 26 HKVLFNG-AGAAALGIANLIVXLXVKEGISKEEACKRIWXVDRKGLLVKNRKETCPNEYHLARF----ANPERESGDLED 100 (254)
T ss_pred cEEEEEC-cCHHHHHHHHHHHHHHHhcCCCHHHHhccEEEECCCCeEeCCCCccCHHHHHHHHH----cCcccccCCHHH
Confidence 6999999 599999999888765431 1 00112689999752 111111111111111 111112257999
Q ss_pred hcC--CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcch
Q 020875 78 ACT--GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN 135 (320)
Q Consensus 78 al~--~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~ 135 (320)
+++ ++|++|=+.+.+. -+.+++++.|.+++ +..++.-.|||..
T Consensus 101 av~~~kptvlIG~S~~~g--------------~ft~evv~~Ma~~~-~~PIIFaLSNPt~ 145 (254)
T cd00762 101 AVEAAKPDFLIGVSRVGG--------------AFTPEVIRAXAEIN-ERPVIFALSNPTS 145 (254)
T ss_pred HHHhhCCCEEEEeCCCCC--------------CCCHHHHHHHhhcC-CCCEEEECCCcCC
Confidence 999 9999987765442 13477889999888 6778888899974
No 428
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=96.44 E-value=0.021 Score=53.66 Aligned_cols=25 Identities=24% Similarity=0.386 Sum_probs=21.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcC
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGV 29 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~ 29 (320)
|+||+|+||+|.+|..++..|....
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p 26 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHP 26 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCC
Confidence 4799999999999999999888653
No 429
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=96.41 E-value=0.019 Score=53.13 Aligned_cols=74 Identities=20% Similarity=0.275 Sum_probs=44.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHH-HHHhcccCCCCcceEEeCChhhhcCCCc
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVK-MELVDAAFPLLKGVVATTDAVEACTGVN 83 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~-~dl~~~~~~~~~~v~~~~~~~~al~~aD 83 (320)
++||+|+||+|.||+.++..|.++.. . ..++.++-..+ -.|+. .++..-.......+ ....+++++|
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f-~---~~~~~~~AS~r----SaG~~~~~f~~~~~~v~~~~----~~~~~~~~~D 68 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHF-P---FEELVLLASAR----SAGKKYIEFGGKSIGVPEDA----ADEFVFSDVD 68 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCC-C---cceEEEEeccc----ccCCccccccCccccCcccc----ccccccccCC
Confidence 47999999999999999999998633 2 12455665432 12332 33322111110000 1234567999
Q ss_pred EEEEeCC
Q 020875 84 IAVMVGG 90 (320)
Q Consensus 84 vVi~~ag 90 (320)
+||+++|
T Consensus 69 ivf~~ag 75 (334)
T COG0136 69 IVFFAAG 75 (334)
T ss_pred EEEEeCc
Confidence 9999986
No 430
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=96.40 E-value=0.0096 Score=51.98 Aligned_cols=160 Identities=17% Similarity=0.179 Sum_probs=89.0
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCC-----CCcceEEeCCh
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-----LLKGVVATTDA 75 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~-----~~~~v~~~~~~ 75 (320)
|.-+.+.++++|++|-||..+...|+++|.. -+++.|+-+ ..+.. ..|.....+ ..-++....++
T Consensus 1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik------~~~i~~~~E---n~~a~-akL~ai~p~~~v~F~~~DVt~~~~~ 70 (261)
T KOG4169|consen 1 MDLTGKNALVTGGAGGIGLATSKALLEKGIK------VLVIDDSEE---NPEAI-AKLQAINPSVSVIFIKCDVTNRGDL 70 (261)
T ss_pred CcccCceEEEecCCchhhHHHHHHHHHcCch------heeehhhhh---CHHHH-HHHhccCCCceEEEEEeccccHHHH
Confidence 4556678999999999999999999999984 344444433 23322 233322211 11344444455
Q ss_pred hhhc-------CCCcEEEEeCCCCCCCCCCHHHHHHhhHH----HHHHHHHHHhhh-cCCCeEEEEEcCcchhhHHHHHH
Q 020875 76 VEAC-------TGVNIAVMVGGFPRKEGMERKDVMSKNVS----IYKAQASALEQH-AAPNCKVLVVANPANTNALILKE 143 (320)
Q Consensus 76 ~~al-------~~aDvVi~~ag~~~~~~~~r~~~~~~n~~----~~~~i~~~i~~~-~~~~~~viv~snP~~~~~~~~~~ 143 (320)
++++ ...|++|.-||+....+ .+..+..|+. .+....+.+.+. +.+.+++++.|+-.++......
T Consensus 71 ~~~f~ki~~~fg~iDIlINgAGi~~dkd--~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~- 147 (261)
T KOG4169|consen 71 EAAFDKILATFGTIDILINGAGILDDKD--WERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVF- 147 (261)
T ss_pred HHHHHHHHHHhCceEEEEcccccccchh--HHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccc-
Confidence 5544 45799999999865322 3333445543 334445555553 2266889999865443211100
Q ss_pred HCCCCCCCc--EEEeehhhHHHHHHHHHHHcCCCCCCeeeeE
Q 020875 144 FAPSIPAKN--ITCLTRLDHNRALGQISEKLNVQVSDVKNVI 183 (320)
Q Consensus 144 ~~~~~~~~~--i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~~ 183 (320)
+-|...+ |++.|. -+|+......+.|+...
T Consensus 148 --pVY~AsKaGVvgFTR--------Sla~~ayy~~sGV~~~a 179 (261)
T KOG4169|consen 148 --PVYAASKAGVVGFTR--------SLADLAYYQRSGVRFNA 179 (261)
T ss_pred --hhhhhcccceeeeeh--------hhhhhhhHhhcCEEEEE
Confidence 1111222 445443 24555555667888554
No 431
>PRK07574 formate dehydrogenase; Provisional
Probab=96.36 E-value=0.026 Score=53.84 Aligned_cols=66 Identities=23% Similarity=0.247 Sum_probs=46.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDv 84 (320)
.++|+|+| .|.||+.++..|..-|. +|+.+|+..... ....++ .++...++.+.++.||+
T Consensus 192 gktVGIvG-~G~IG~~vA~~l~~fG~-------~V~~~dr~~~~~---~~~~~~---------g~~~~~~l~ell~~aDv 251 (385)
T PRK07574 192 GMTVGIVG-AGRIGLAVLRRLKPFDV-------KLHYTDRHRLPE---EVEQEL---------GLTYHVSFDSLVSVCDV 251 (385)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCC-------EEEEECCCCCch---hhHhhc---------CceecCCHHHHhhcCCE
Confidence 47999999 79999999999988776 899999863111 000011 12222468889999999
Q ss_pred EEEeCC
Q 020875 85 AVMVGG 90 (320)
Q Consensus 85 Vi~~ag 90 (320)
|++...
T Consensus 252 V~l~lP 257 (385)
T PRK07574 252 VTIHCP 257 (385)
T ss_pred EEEcCC
Confidence 999864
No 432
>PRK13243 glyoxylate reductase; Reviewed
Probab=96.34 E-value=0.02 Score=53.66 Aligned_cols=64 Identities=13% Similarity=-0.038 Sum_probs=46.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDv 84 (320)
.++|+|+| .|.||+.++..|...|+ +|..+|+... ... +.... +. ..++.+.+++||+
T Consensus 150 gktvgIiG-~G~IG~~vA~~l~~~G~-------~V~~~d~~~~--~~~----~~~~~-------~~-~~~l~ell~~aDi 207 (333)
T PRK13243 150 GKTIGIIG-FGRIGQAVARRAKGFGM-------RILYYSRTRK--PEA----EKELG-------AE-YRPLEELLRESDF 207 (333)
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHCCC-------EEEEECCCCC--hhh----HHHcC-------CE-ecCHHHHHhhCCE
Confidence 47999999 79999999999988776 8999998632 111 11111 11 1367888999999
Q ss_pred EEEeCC
Q 020875 85 AVMVGG 90 (320)
Q Consensus 85 Vi~~ag 90 (320)
|+++..
T Consensus 208 V~l~lP 213 (333)
T PRK13243 208 VSLHVP 213 (333)
T ss_pred EEEeCC
Confidence 999863
No 433
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=96.33 E-value=0.02 Score=53.09 Aligned_cols=91 Identities=13% Similarity=0.104 Sum_probs=57.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDv 84 (320)
.++|+|+| .|.||+.++..|..-|+ +|..+|+... ...+ +.. +....++.+.+++||+
T Consensus 136 g~tvgIvG-~G~IG~~vA~~l~afG~-------~V~~~~~~~~--~~~~----~~~--------~~~~~~l~e~l~~aDv 193 (312)
T PRK15469 136 DFTIGILG-AGVLGSKVAQSLQTWGF-------PLRCWSRSRK--SWPG----VQS--------FAGREELSAFLSQTRV 193 (312)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEEeCCCC--CCCC----cee--------ecccccHHHHHhcCCE
Confidence 46999999 79999999999998776 8999997531 1110 000 0011367899999999
Q ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEc
Q 020875 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA 131 (320)
Q Consensus 85 Vi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~s 131 (320)
|+++..... .++ ..+ + .+.+.+.. +++.+|+++
T Consensus 194 vv~~lPlt~---~T~--------~li-~-~~~l~~mk-~ga~lIN~a 226 (312)
T PRK15469 194 LINLLPNTP---ETV--------GII-N-QQLLEQLP-DGAYLLNLA 226 (312)
T ss_pred EEECCCCCH---HHH--------HHh-H-HHHHhcCC-CCcEEEECC
Confidence 999863221 111 111 1 23344443 678889887
No 434
>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating. This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.
Probab=96.33 E-value=0.017 Score=56.57 Aligned_cols=68 Identities=15% Similarity=0.151 Sum_probs=43.9
Q ss_pred EEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCC---hhhhcCCCc
Q 020875 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTD---AVEACTGVN 83 (320)
Q Consensus 7 kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~---~~~al~~aD 83 (320)
+|+|+| .|.+|.+++..|+..|+ +|.++|+++ ++++. +.+.... ...+....+ ..+.++++|
T Consensus 1 ~IG~IG-LG~MG~~mA~nL~~~G~-------~V~v~drt~--~~~~~----l~~~~~~-g~~~~~~~s~~e~v~~l~~~d 65 (467)
T TIGR00873 1 DIGVIG-LAVMGSNLALNMADHGF-------TVSVYNRTP--EKTDE----FLAEHAK-GKKIVGAYSIEEFVQSLERPR 65 (467)
T ss_pred CEEEEe-eHHHHHHHHHHHHhcCC-------eEEEEeCCH--HHHHH----HHhhccC-CCCceecCCHHHHHhhcCCCC
Confidence 489999 79999999999999997 899999874 33332 2211000 001222223 334556799
Q ss_pred EEEEeC
Q 020875 84 IAVMVG 89 (320)
Q Consensus 84 vVi~~a 89 (320)
+||++.
T Consensus 66 vIil~v 71 (467)
T TIGR00873 66 KIMLMV 71 (467)
T ss_pred EEEEEC
Confidence 988875
No 435
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=96.31 E-value=0.016 Score=55.94 Aligned_cols=104 Identities=17% Similarity=0.193 Sum_probs=63.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDv 84 (320)
..+|+|+| +|.+|..++..|...|.. +|.+++++. +++...+..+.. ......+..+++.++|+
T Consensus 180 ~~~VlViG-aG~iG~~~a~~L~~~G~~------~V~v~~rs~--~ra~~la~~~g~-------~~i~~~~l~~~l~~aDv 243 (417)
T TIGR01035 180 GKKALLIG-AGEMGELVAKHLLRKGVG------KILIANRTY--ERAEDLAKELGG-------EAVKFEDLEEYLAEADI 243 (417)
T ss_pred CCEEEEEC-ChHHHHHHHHHHHHCCCC------EEEEEeCCH--HHHHHHHHHcCC-------eEeeHHHHHHHHhhCCE
Confidence 47999999 599999999999887752 799999864 333322222211 11111356778899999
Q ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhh
Q 020875 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTN 137 (320)
Q Consensus 85 Vi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~ 137 (320)
||.+.+.+.. -.+ .+.++.+.+....+.+++-+++|-|+-
T Consensus 244 Vi~aT~s~~~-ii~------------~e~l~~~~~~~~~~~~viDla~Prdid 283 (417)
T TIGR01035 244 VISSTGAPHP-IVS------------KEDVERALRERTRPLFIIDIAVPRDVD 283 (417)
T ss_pred EEECCCCCCc-eEc------------HHHHHHHHhcCCCCeEEEEeCCCCCCC
Confidence 9998765431 111 111222211111235777889997764
No 436
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=96.31 E-value=0.023 Score=53.31 Aligned_cols=70 Identities=21% Similarity=0.383 Sum_probs=43.0
Q ss_pred EEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcEEE
Q 020875 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAV 86 (320)
Q Consensus 7 kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDvVi 86 (320)
||+|+||+|++|..++..|.++++- ..+++++...++ .+....+.. .++....-..++++++|+||
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp----~~~l~~~as~~~----~g~~~~~~~------~~~~~~~~~~~~~~~~D~v~ 66 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFP----IDKLVLLASDRS----AGRKVTFKG------KELEVNEAKIESFEGIDIAL 66 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCC----hhhEEEEecccc----CCCeeeeCC------eeEEEEeCChHHhcCCCEEE
Confidence 6899999999999999999887652 235666654321 111111111 12222211235678999999
Q ss_pred EeCC
Q 020875 87 MVGG 90 (320)
Q Consensus 87 ~~ag 90 (320)
+++|
T Consensus 67 ~a~g 70 (339)
T TIGR01296 67 FSAG 70 (339)
T ss_pred ECCC
Confidence 9876
No 437
>PRK15059 tartronate semialdehyde reductase; Provisional
Probab=96.27 E-value=0.014 Score=53.60 Aligned_cols=63 Identities=24% Similarity=0.369 Sum_probs=45.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcEE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDvV 85 (320)
|||++|| .|.+|++++..|++.|+ ++.++|+++ +.+ ++... ......+..++.+++|+|
T Consensus 1 m~Ig~IG-lG~MG~~ma~~L~~~G~-------~v~v~~~~~---~~~----~~~~~------g~~~~~s~~~~~~~advV 59 (292)
T PRK15059 1 MKLGFIG-LGIMGTPMAINLARAGH-------QLHVTTIGP---VAD----ELLSL------GAVSVETARQVTEASDII 59 (292)
T ss_pred CeEEEEc-cCHHHHHHHHHHHHCCC-------eEEEEeCCH---hHH----HHHHc------CCeecCCHHHHHhcCCEE
Confidence 4899999 79999999999999987 788899863 111 12111 112223566778899999
Q ss_pred EEeC
Q 020875 86 VMVG 89 (320)
Q Consensus 86 i~~a 89 (320)
|++.
T Consensus 60 i~~v 63 (292)
T PRK15059 60 FIMV 63 (292)
T ss_pred EEeC
Confidence 9975
No 438
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=96.27 E-value=0.011 Score=54.87 Aligned_cols=36 Identities=22% Similarity=0.321 Sum_probs=30.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecC
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP 45 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~ 45 (320)
+|+||+|+||+|+.|..|...|...... |+.++...
T Consensus 1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~v------e~~~~ss~ 36 (349)
T COG0002 1 MMIKVGIVGASGYTGLELLRLLAGHPDV------ELILISSR 36 (349)
T ss_pred CCceEEEEcCCCCcHHHHHHHHhcCCCe------EEEEeech
Confidence 3679999999999999999999887653 77777754
No 439
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=96.27 E-value=0.027 Score=52.52 Aligned_cols=74 Identities=22% Similarity=0.232 Sum_probs=51.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCc
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aD 83 (320)
...+++|+| +|..|.+.+..+...... .+|.++|++. ++++....++.+. ...+....+..+++++||
T Consensus 127 ~~~~lgiiG-~G~qA~~~l~al~~~~~~-----~~v~V~~r~~--~~~~~~~~~~~~~----g~~v~~~~~~~eav~~aD 194 (325)
T TIGR02371 127 DSSVLGIIG-AGRQAWTQLEALSRVFDL-----EEVSVYCRTP--STREKFALRASDY----EVPVRAATDPREAVEGCD 194 (325)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhcCCC-----CEEEEECCCH--HHHHHHHHHHHhh----CCcEEEeCCHHHHhccCC
Confidence 357999999 799999877666543222 3899999974 4454444444321 224556678899999999
Q ss_pred EEEEeC
Q 020875 84 IAVMVG 89 (320)
Q Consensus 84 vVi~~a 89 (320)
+|+.+.
T Consensus 195 iVitaT 200 (325)
T TIGR02371 195 ILVTTT 200 (325)
T ss_pred EEEEec
Confidence 999865
No 440
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=96.24 E-value=0.065 Score=46.40 Aligned_cols=34 Identities=26% Similarity=0.445 Sum_probs=30.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecC
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP 45 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~ 45 (320)
..||+|+| +|.+|+.++..|+..|+ + +++|+|.+
T Consensus 21 ~~~V~IvG-~GglGs~ia~~La~~Gv-g-----~i~lvD~D 54 (200)
T TIGR02354 21 QATVAICG-LGGLGSNVAINLARAGI-G-----KLILVDFD 54 (200)
T ss_pred CCcEEEEC-cCHHHHHHHHHHHHcCC-C-----EEEEECCC
Confidence 46999999 59999999999999986 2 79999976
No 441
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.21 E-value=0.012 Score=49.84 Aligned_cols=66 Identities=20% Similarity=0.124 Sum_probs=45.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDv 84 (320)
.++|+|+| .|.||+.++..|..-|. +|..+|+.... . . ...+. .+ ...++.+.++.||+
T Consensus 36 g~tvgIiG-~G~IG~~vA~~l~~fG~-------~V~~~d~~~~~---~-~--~~~~~------~~-~~~~l~ell~~aDi 94 (178)
T PF02826_consen 36 GKTVGIIG-YGRIGRAVARRLKAFGM-------RVIGYDRSPKP---E-E--GADEF------GV-EYVSLDELLAQADI 94 (178)
T ss_dssp TSEEEEES-TSHHHHHHHHHHHHTT--------EEEEEESSCHH---H-H--HHHHT------TE-EESSHHHHHHH-SE
T ss_pred CCEEEEEE-EcCCcCeEeeeeecCCc-------eeEEecccCCh---h-h--hcccc------cc-eeeehhhhcchhhh
Confidence 47999999 79999999999998776 89999987421 1 1 11111 11 12378889999999
Q ss_pred EEEeCCC
Q 020875 85 AVMVGGF 91 (320)
Q Consensus 85 Vi~~ag~ 91 (320)
|+++...
T Consensus 95 v~~~~pl 101 (178)
T PF02826_consen 95 VSLHLPL 101 (178)
T ss_dssp EEE-SSS
T ss_pred hhhhhcc
Confidence 9998643
No 442
>PLN02712 arogenate dehydrogenase
Probab=96.21 E-value=0.055 Score=55.34 Aligned_cols=65 Identities=14% Similarity=0.213 Sum_probs=44.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcC-CC
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT-GV 82 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~-~a 82 (320)
+++||+||| .|.+|..++..|...|+ +|..+|++. . . ..+.++ . +....+..+.++ ++
T Consensus 368 ~~~kIgIIG-lG~mG~slA~~L~~~G~-------~V~~~dr~~--~-~-~~a~~~--G-------v~~~~~~~el~~~~a 426 (667)
T PLN02712 368 SKLKIAIVG-FGNFGQFLAKTMVKQGH-------TVLAYSRSD--Y-S-DEAQKL--G-------VSYFSDADDLCEEHP 426 (667)
T ss_pred CCCEEEEEe-cCHHHHHHHHHHHHCcC-------EEEEEECCh--H-H-HHHHHc--C-------CeEeCCHHHHHhcCC
Confidence 458999999 79999999999998776 799999863 1 1 111111 1 122345555554 58
Q ss_pred cEEEEeC
Q 020875 83 NIAVMVG 89 (320)
Q Consensus 83 DvVi~~a 89 (320)
|+||++.
T Consensus 427 DvVILav 433 (667)
T PLN02712 427 EVILLCT 433 (667)
T ss_pred CEEEECC
Confidence 9999985
No 443
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=96.21 E-value=0.21 Score=46.13 Aligned_cols=161 Identities=12% Similarity=0.045 Sum_probs=85.1
Q ss_pred CCCCCEEEEEcC--CChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcc--------c--------C
Q 020875 2 AKEPVRVLVTGA--AGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA--------A--------F 63 (320)
Q Consensus 2 ~~~~~kI~IiGA--~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~--------~--------~ 63 (320)
+-+.+.++|||| +..||.+++..|+..|. .|++ .++. ++++....++... . .
T Consensus 6 ~l~gk~alITGa~~s~GIG~a~A~~la~~Ga-------~Vv~-~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (303)
T PLN02730 6 DLRGKRAFIAGVADDNGYGWAIAKALAAAGA-------EILV-GTWV--PALNIFETSLRRGKFDESRKLPDGSLMEITK 75 (303)
T ss_pred CCCCCEEEEeCCCCCCcHHHHHHHHHHHCCC-------EEEE-EeCc--chhhHHHHhhhccccchhhhcccccccCcCe
Confidence 334568999998 68999999999999986 7777 4331 2333222222110 0 0
Q ss_pred CCCcceEE--eC------------------C-------hhhhcCCCcEEEEeCCCCC---CC--CCCH---HHHHHhhHH
Q 020875 64 PLLKGVVA--TT------------------D-------AVEACTGVNIAVMVGGFPR---KE--GMER---KDVMSKNVS 108 (320)
Q Consensus 64 ~~~~~v~~--~~------------------~-------~~~al~~aDvVi~~ag~~~---~~--~~~r---~~~~~~n~~ 108 (320)
.+..++.. .. + ..+.+-..|++|+.||... .+ ..+. ...+..|+.
T Consensus 76 ~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~ 155 (303)
T PLN02730 76 VYPLDAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSY 155 (303)
T ss_pred eeecceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhH
Confidence 00112210 00 1 1122345799999996421 11 1222 334667776
Q ss_pred HHHHHHHHHhhhcCCCeEEEEEcCcchhhHHHHHHHCCCCCCCc-EEEeehhhHHHHHHHHHHHcCCCCCCeeee
Q 020875 109 IYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRALGQISEKLNVQVSDVKNV 182 (320)
Q Consensus 109 ~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~~~~~~~~~~~~~-i~~~t~ld~~r~~~~~a~~l~v~~~~v~~~ 182 (320)
....+.+.+...-...+.+|++|+-... ...|... .|+.++---..|-+.++..++- ...|+.-
T Consensus 156 ~~~~l~~~~~p~m~~~G~II~isS~a~~---------~~~p~~~~~Y~asKaAl~~l~~~la~El~~-~~gIrVn 220 (303)
T PLN02730 156 SFVSLLQHFGPIMNPGGASISLTYIASE---------RIIPGYGGGMSSAKAALESDTRVLAFEAGR-KYKIRVN 220 (303)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEechhhc---------CCCCCCchhhHHHHHHHHHHHHHHHHHhCc-CCCeEEE
Confidence 6655555544431123677777753211 1222222 3566666666777778887752 2456643
No 444
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.
Probab=96.17 E-value=0.044 Score=51.45 Aligned_cols=25 Identities=36% Similarity=0.599 Sum_probs=22.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCc
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVM 30 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~ 30 (320)
+||+|+||+|++|+.++..|.+.+.
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~ 25 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPY 25 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC
Confidence 5899999999999999998877654
No 445
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=96.17 E-value=0.033 Score=47.21 Aligned_cols=119 Identities=17% Similarity=0.159 Sum_probs=61.9
Q ss_pred EEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCC-ccchhHHHHHHHhcccCCC---CcceEEeCChhhhc---
Q 020875 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP-AAEALNGVKMELVDAAFPL---LKGVVATTDAVEAC--- 79 (320)
Q Consensus 7 kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~-~~~~~~~~~~dl~~~~~~~---~~~v~~~~~~~~al--- 79 (320)
.++|+||.|.+|..++..|++++.. .++|+.++. ...........+....... ..++....+..+++
T Consensus 2 tylitGG~gglg~~la~~La~~~~~------~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~ 75 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGAR------RLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQL 75 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-S------EEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTS
T ss_pred EEEEECCccHHHHHHHHHHHHcCCC------EEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHH
Confidence 3689999999999999999998853 899999872 1111222233333322110 11221112222332
Q ss_pred ----CCCcEEEEeCCCCCCC---CCCHHH---HHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q 020875 80 ----TGVNIAVMVGGFPRKE---GMERKD---VMSKNVSIYKAQASALEQHAAPNCKVLVVANP 133 (320)
Q Consensus 80 ----~~aDvVi~~ag~~~~~---~~~r~~---~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP 133 (320)
...|.|||+||..... ..+..+ .+..-+....++.+..+... .+ .+|++|+-
T Consensus 76 ~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~-l~-~~i~~SSi 137 (181)
T PF08659_consen 76 RQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRP-LD-FFILFSSI 137 (181)
T ss_dssp HTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTT-TS-EEEEEEEH
T ss_pred HhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCC-CC-eEEEECCh
Confidence 3457899999986432 223332 34556677778888887753 43 56666643
No 446
>PRK08605 D-lactate dehydrogenase; Validated
Probab=96.15 E-value=0.019 Score=53.72 Aligned_cols=63 Identities=25% Similarity=0.248 Sum_probs=44.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHh-cCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCc
Q 020875 5 PVRVLVTGAAGQIGYALVPMIAR-GVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~-~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aD 83 (320)
.++|+|+| .|.+|+.++..|+. .|. +|..+|+.... . .... +....++.+++++||
T Consensus 146 g~~VgIIG-~G~IG~~vA~~L~~~~g~-------~V~~~d~~~~~--~------~~~~-------~~~~~~l~ell~~aD 202 (332)
T PRK08605 146 DLKVAVIG-TGRIGLAVAKIFAKGYGS-------DVVAYDPFPNA--K------AATY-------VDYKDTIEEAVEGAD 202 (332)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhcCCC-------EEEEECCCccH--h------HHhh-------ccccCCHHHHHHhCC
Confidence 47999999 69999999999853 343 78899975311 1 0000 112236788999999
Q ss_pred EEEEeCC
Q 020875 84 IAVMVGG 90 (320)
Q Consensus 84 vVi~~ag 90 (320)
+|+++..
T Consensus 203 vIvl~lP 209 (332)
T PRK08605 203 IVTLHMP 209 (332)
T ss_pred EEEEeCC
Confidence 9999863
No 447
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=96.13 E-value=0.033 Score=50.96 Aligned_cols=61 Identities=23% Similarity=0.384 Sum_probs=43.9
Q ss_pred EEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcEEEEeC
Q 020875 10 VTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVG 89 (320)
Q Consensus 10 IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDvVi~~a 89 (320)
++| .|.+|.+++..|+..|+ +|.++|+++ ++.+ ++... ......+..++++++|+||++.
T Consensus 1 ~IG-lG~mG~~mA~~L~~~G~-------~V~v~dr~~--~~~~----~l~~~------g~~~~~s~~~~~~~advVil~v 60 (288)
T TIGR01692 1 FIG-LGNMGGPMAANLLKAGH-------PVRVFDLFP--DAVE----EAVAA------GAQAAASPAEAAEGADRVITML 60 (288)
T ss_pred CCc-ccHhHHHHHHHHHhCCC-------eEEEEeCCH--HHHH----HHHHc------CCeecCCHHHHHhcCCEEEEeC
Confidence 478 79999999999999887 899999864 3222 22221 1223446778899999999985
Q ss_pred C
Q 020875 90 G 90 (320)
Q Consensus 90 g 90 (320)
.
T Consensus 61 p 61 (288)
T TIGR01692 61 P 61 (288)
T ss_pred C
Confidence 3
No 448
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.13 E-value=0.085 Score=46.57 Aligned_cols=78 Identities=24% Similarity=0.348 Sum_probs=48.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecC----Cccc-hhHHHHHHHhcccCCCCcceEEeCChhhh
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP----PAAE-ALNGVKMELVDAAFPLLKGVVATTDAVEA 78 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~----~~~~-~~~~~~~dl~~~~~~~~~~v~~~~~~~~a 78 (320)
+..||+|+| +|..|..++..|...|.- ..++.++|++ .++. .+......+.+.... ... ..++.++
T Consensus 24 ~~~rvlvlG-AGgAg~aiA~~L~~~G~~----~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~--~~~--~~~l~~~ 94 (226)
T cd05311 24 EEVKIVING-AGAAGIAIARLLLAAGAK----PENIVVVDSKGVIYEGREDDLNPDKNEIAKETNP--EKT--GGTLKEA 94 (226)
T ss_pred cCCEEEEEC-chHHHHHHHHHHHHcCcC----cceEEEEeCCCccccccchhhhHHHHHHHHHhcc--Ccc--cCCHHHH
Confidence 347999999 599999999999988762 1269999997 2211 121121222211100 011 1256688
Q ss_pred cCCCcEEEEeCC
Q 020875 79 CTGVNIAVMVGG 90 (320)
Q Consensus 79 l~~aDvVi~~ag 90 (320)
++++|+||.+.+
T Consensus 95 l~~~dvlIgaT~ 106 (226)
T cd05311 95 LKGADVFIGVSR 106 (226)
T ss_pred HhcCCEEEeCCC
Confidence 999999999865
No 449
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=96.12 E-value=0.044 Score=50.69 Aligned_cols=26 Identities=23% Similarity=0.360 Sum_probs=23.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCc
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVM 30 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~ 30 (320)
++||+|+||+|++|..++..|.+...
T Consensus 2 ~~~VaIvGAtGy~G~eLlrlL~~hp~ 27 (313)
T PRK11863 2 KPKVFIDGEAGTTGLQIRERLAGRSD 27 (313)
T ss_pred CcEEEEECCCCHHHHHHHHHHhcCCC
Confidence 57999999999999999998887764
No 450
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=96.12 E-value=0.02 Score=51.58 Aligned_cols=67 Identities=25% Similarity=0.343 Sum_probs=43.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEE-EEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCc
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILH-MLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~-l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aD 83 (320)
||||+|+|++|.+|+.++..+.+..-+ +++ ++|++. ++.... . ...+....++.+.++++|
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~------elvav~d~~~--~~~~~~----~------~~~i~~~~dl~~ll~~~D 62 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAAEDL------ELVAAVDRPG--SPLVGQ----G------ALGVAITDDLEAVLADAD 62 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCC------EEEEEEecCC--cccccc----C------CCCccccCCHHHhccCCC
Confidence 579999997799999999887764322 554 678754 222111 1 112334457777778899
Q ss_pred EEEEeC
Q 020875 84 IAVMVG 89 (320)
Q Consensus 84 vVi~~a 89 (320)
+||.+.
T Consensus 63 vVid~t 68 (257)
T PRK00048 63 VLIDFT 68 (257)
T ss_pred EEEECC
Confidence 999764
No 451
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=96.11 E-value=0.082 Score=46.70 Aligned_cols=125 Identities=18% Similarity=0.144 Sum_probs=65.2
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHh----cccCCCCcceEE-eC--
Q 020875 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELV----DAAFPLLKGVVA-TT-- 73 (320)
Q Consensus 1 m~~~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~----~~~~~~~~~v~~-~~-- 73 (320)
|...++.|.||||++.+|..++..|++.|. .+++..++.....++....... ........+++. ..
T Consensus 1 ~~~~~~~ilITGas~GiG~aia~~l~~~G~-------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v 73 (251)
T COG1028 1 MDLSGKVALVTGASSGIGRAIARALAREGA-------RVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESV 73 (251)
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-------eEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHH
Confidence 455678999999999999999999998886 5555554422111111111111 000000112221 11
Q ss_pred -----ChhhhcCCCcEEEEeCCCCCC--C--CCC---HHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q 020875 74 -----DAVEACTGVNIAVMVGGFPRK--E--GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANP 133 (320)
Q Consensus 74 -----~~~~al~~aDvVi~~ag~~~~--~--~~~---r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP 133 (320)
...+.+...|++|+.||.... + ..+ -.+.+..|+.....+.+.+....... ++|++++.
T Consensus 74 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~Iv~isS~ 144 (251)
T COG1028 74 EALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ-RIVNISSV 144 (251)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC-eEEEECCc
Confidence 112223448999999987532 1 122 23456677765555554444332122 56666654
No 452
>PRK06141 ornithine cyclodeaminase; Validated
Probab=96.07 E-value=0.042 Score=50.96 Aligned_cols=74 Identities=19% Similarity=0.166 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHh-cCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCC
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIAR-GVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~-~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~a 82 (320)
...+|+|+| +|..|...+..+.. .+. .+|.++++++ ++++..+.++... ...+....+..+++++|
T Consensus 124 ~~~~v~iiG-~G~~a~~~~~al~~~~~~------~~V~V~~Rs~--~~a~~~a~~~~~~----g~~~~~~~~~~~av~~a 190 (314)
T PRK06141 124 DASRLLVVG-TGRLASLLALAHASVRPI------KQVRVWGRDP--AKAEALAAELRAQ----GFDAEVVTDLEAAVRQA 190 (314)
T ss_pred CCceEEEEC-CcHHHHHHHHHHHhcCCC------CEEEEEcCCH--HHHHHHHHHHHhc----CCceEEeCCHHHHHhcC
Confidence 357999999 69999999876654 443 2899999874 4555544444321 11355556778899999
Q ss_pred cEEEEeCC
Q 020875 83 NIAVMVGG 90 (320)
Q Consensus 83 DvVi~~ag 90 (320)
|+|+.+..
T Consensus 191 DIVi~aT~ 198 (314)
T PRK06141 191 DIISCATL 198 (314)
T ss_pred CEEEEeeC
Confidence 99976543
No 453
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.07 E-value=0.027 Score=47.67 Aligned_cols=32 Identities=31% Similarity=0.602 Sum_probs=28.3
Q ss_pred EEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecC
Q 020875 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP 45 (320)
Q Consensus 7 kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~ 45 (320)
||+|+| +|.+|+.++..|+..|. + ++.|+|.+
T Consensus 1 ~VlViG-~GglGs~ia~~La~~Gv-g-----~i~lvD~D 32 (174)
T cd01487 1 KVGIAG-AGGLGSNIAVLLARSGV-G-----NLKLVDFD 32 (174)
T ss_pred CEEEEC-cCHHHHHHHHHHHHcCC-C-----eEEEEeCC
Confidence 689999 69999999999999986 2 79999975
No 454
>PRK08291 ectoine utilization protein EutC; Validated
Probab=96.06 E-value=0.044 Score=51.21 Aligned_cols=74 Identities=19% Similarity=0.170 Sum_probs=51.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHh-cCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCc
Q 020875 5 PVRVLVTGAAGQIGYALVPMIAR-GVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~-~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aD 83 (320)
.++|+|+| +|..|.+.+..+.. .+. .+|.+++++. ++++....++.+. ....+....+..+++.++|
T Consensus 132 ~~~v~IiG-aG~~a~~~~~al~~~~~~------~~V~v~~R~~--~~a~~l~~~~~~~---~g~~v~~~~d~~~al~~aD 199 (330)
T PRK08291 132 ASRAAVIG-AGEQARLQLEALTLVRPI------REVRVWARDA--AKAEAYAADLRAE---LGIPVTVARDVHEAVAGAD 199 (330)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhcCCC------CEEEEEcCCH--HHHHHHHHHHhhc---cCceEEEeCCHHHHHccCC
Confidence 47999999 69999988877764 443 2899999874 5555554444321 1123455567889999999
Q ss_pred EEEEeCC
Q 020875 84 IAVMVGG 90 (320)
Q Consensus 84 vVi~~ag 90 (320)
+||.+..
T Consensus 200 iVi~aT~ 206 (330)
T PRK08291 200 IIVTTTP 206 (330)
T ss_pred EEEEeeC
Confidence 9988754
No 455
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=96.05 E-value=0.044 Score=49.92 Aligned_cols=76 Identities=11% Similarity=0.072 Sum_probs=50.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCc
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aD 83 (320)
+..+++|+| +|.+|.+++..|...|.. +|.+++++. ++++....++.... .+....+..+.+.++|
T Consensus 122 ~~k~vlVlG-aGg~a~ai~~aL~~~g~~------~V~v~~R~~--~~a~~l~~~~~~~~-----~~~~~~~~~~~~~~~D 187 (278)
T PRK00258 122 KGKRILILG-AGGAARAVILPLLDLGVA------EITIVNRTV--ERAEELAKLFGALG-----KAELDLELQEELADFD 187 (278)
T ss_pred CCCEEEEEc-CcHHHHHHHHHHHHcCCC------EEEEEeCCH--HHHHHHHHHhhhcc-----ceeecccchhccccCC
Confidence 346899999 599999999999988852 899999864 44443333332111 1112113456778999
Q ss_pred EEEEeCCCCC
Q 020875 84 IAVMVGGFPR 93 (320)
Q Consensus 84 vVi~~ag~~~ 93 (320)
+||.+.....
T Consensus 188 ivInaTp~g~ 197 (278)
T PRK00258 188 LIINATSAGM 197 (278)
T ss_pred EEEECCcCCC
Confidence 9999865443
No 456
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=95.99 E-value=0.004 Score=55.09 Aligned_cols=64 Identities=9% Similarity=0.093 Sum_probs=39.4
Q ss_pred CCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeC------ChhhhcCCCcEEE
Q 020875 13 AAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT------DAVEACTGVNIAV 86 (320)
Q Consensus 13 A~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~------~~~~al~~aDvVi 86 (320)
++|++|++++..|+.+|+ +|++++++.. .. .... ....-+...+ ...+.+++.|+||
T Consensus 24 SSG~iG~aLA~~L~~~G~-------~V~li~r~~~---~~----~~~~---~~v~~i~v~s~~~m~~~l~~~~~~~DivI 86 (229)
T PRK06732 24 STGQLGKIIAETFLAAGH-------EVTLVTTKTA---VK----PEPH---PNLSIIEIENVDDLLETLEPLVKDHDVLI 86 (229)
T ss_pred cchHHHHHHHHHHHhCCC-------EEEEEECccc---cc----CCCC---CCeEEEEEecHHHHHHHHHHHhcCCCEEE
Confidence 489999999999999997 8998886421 00 0000 0000111111 2234567899999
Q ss_pred EeCCCCC
Q 020875 87 MVGGFPR 93 (320)
Q Consensus 87 ~~ag~~~ 93 (320)
|+|++..
T Consensus 87 h~AAvsd 93 (229)
T PRK06732 87 HSMAVSD 93 (229)
T ss_pred eCCccCC
Confidence 9999753
No 457
>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []. The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.
Probab=95.99 E-value=0.038 Score=51.27 Aligned_cols=73 Identities=26% Similarity=0.240 Sum_probs=49.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHh-cCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCC
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIAR-GVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~-~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~a 82 (320)
...+++|+| +|..+.+-+..+.. .++ .+|.++++++ ++++..+.++.+ ....+....+.++++++|
T Consensus 127 ~~~~l~viG-aG~QA~~~~~a~~~~~~i------~~v~v~~r~~--~~~~~~~~~~~~----~~~~v~~~~~~~~av~~a 193 (313)
T PF02423_consen 127 DARTLGVIG-AGVQARWHLRALAAVRPI------KEVRVYSRSP--ERAEAFAARLRD----LGVPVVAVDSAEEAVRGA 193 (313)
T ss_dssp T--EEEEE---SHHHHHHHHHHHHHS--------SEEEEE-SSH--HHHHHHHHHHHC----CCTCEEEESSHHHHHTTS
T ss_pred CCceEEEEC-CCHHHHHHHHHHHHhCCc------eEEEEEccCh--hHHHHHHHhhcc----ccccceeccchhhhcccC
Confidence 457999999 69999988876664 443 3899999974 556666666665 134677778899999999
Q ss_pred cEEEEeC
Q 020875 83 NIAVMVG 89 (320)
Q Consensus 83 DvVi~~a 89 (320)
|+|+.+.
T Consensus 194 Dii~taT 200 (313)
T PF02423_consen 194 DIIVTAT 200 (313)
T ss_dssp SEEEE--
T ss_pred CEEEEcc
Confidence 9988754
No 458
>PRK08818 prephenate dehydrogenase; Provisional
Probab=95.98 E-value=0.076 Score=50.35 Aligned_cols=55 Identities=15% Similarity=0.160 Sum_probs=41.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhc-CcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCc
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~-~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aD 83 (320)
.+||+|+|.+|.+|..++..|.+. ++ +|..+|+.. .. ..+..+.+++||
T Consensus 4 ~~~I~IIGl~GliGgslA~alk~~~~~-------~V~g~D~~d--------------~~---------~~~~~~~v~~aD 53 (370)
T PRK08818 4 QPVVGIVGSAGAYGRWLARFLRTRMQL-------EVIGHDPAD--------------PG---------SLDPATLLQRAD 53 (370)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCC-------EEEEEcCCc--------------cc---------cCCHHHHhcCCC
Confidence 469999996699999999999875 33 788888631 00 014567789999
Q ss_pred EEEEeC
Q 020875 84 IAVMVG 89 (320)
Q Consensus 84 vVi~~a 89 (320)
+||++.
T Consensus 54 lVilav 59 (370)
T PRK08818 54 VLIFSA 59 (370)
T ss_pred EEEEeC
Confidence 999985
No 459
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=95.98 E-value=0.043 Score=50.07 Aligned_cols=118 Identities=17% Similarity=0.194 Sum_probs=74.7
Q ss_pred EEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCC--cceEEeC------Chhhhc
Q 020875 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL--KGVVATT------DAVEAC 79 (320)
Q Consensus 8 I~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~--~~v~~~~------~~~~al 79 (320)
.+|+||+..||..++.+|+.+|+ .|+|+.|++ +|+...+-++.+...-.. ..++.+. .+.+.+
T Consensus 52 AVVTGaTDGIGKayA~eLAkrG~-------nvvLIsRt~--~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l 122 (312)
T KOG1014|consen 52 AVVTGATDGIGKAYARELAKRGF-------NVVLISRTQ--EKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKL 122 (312)
T ss_pred EEEECCCCcchHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHh
Confidence 46889999999999999999998 899999974 788888888876542111 1111111 244556
Q ss_pred CCCc--EEEEeCCCCCCCCC-----CH---HHHHHhhH----HHHHHHHHHHhhhcCCCeEEEEEcCcchh
Q 020875 80 TGVN--IAVMVGGFPRKEGM-----ER---KDVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANT 136 (320)
Q Consensus 80 ~~aD--vVi~~ag~~~~~~~-----~r---~~~~~~n~----~~~~~i~~~i~~~~~~~~~viv~snP~~~ 136 (320)
.+-| +.|..+|....... +. .+.+..|. ..++-+.+.|.+. +.+.++++++..+.
T Consensus 123 ~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r--~~G~IvnigS~ag~ 191 (312)
T KOG1014|consen 123 AGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVER--KKGIIVNIGSFAGL 191 (312)
T ss_pred cCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcC--CCceEEEecccccc
Confidence 6555 56667776442111 11 12222332 3566677777774 35778888876554
No 460
>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein. This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.
Probab=95.96 E-value=0.09 Score=48.50 Aligned_cols=58 Identities=21% Similarity=0.148 Sum_probs=39.3
Q ss_pred hHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhH-HHHHHHhcccCCCCcceEEeCChhhhcCCCcEEEEeC
Q 020875 17 IGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN-GVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVG 89 (320)
Q Consensus 17 vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~-~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDvVi~~a 89 (320)
=|+++|..|+..|+ +|.++|+++ +++. .....+.+. .....++..++.+++|+||.+.
T Consensus 31 gGspMArnLlkAGh-------eV~V~Drnr--sa~e~e~~e~Laea------GA~~AaS~aEAAa~ADVVIL~L 89 (341)
T TIGR01724 31 GGSRMAIEFAMAGH-------DVVLAEPNR--EFMSDDLWKKVEDA------GVKVVSDDKEAAKHGEIHVLFT 89 (341)
T ss_pred CHHHHHHHHHHCCC-------EEEEEeCCh--hhhhhhhhHHHHHC------CCeecCCHHHHHhCCCEEEEec
Confidence 48899999999997 899999864 2221 112223322 1233446788999999999985
No 461
>KOG4777 consensus Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=95.95 E-value=0.011 Score=52.32 Aligned_cols=75 Identities=11% Similarity=0.141 Sum_probs=46.6
Q ss_pred EEE-EEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHH----HHHhcc--cCCCCcceEEeCChhhhc
Q 020875 7 RVL-VTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVK----MELVDA--AFPLLKGVVATTDAVEAC 79 (320)
Q Consensus 7 kI~-IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~----~dl~~~--~~~~~~~v~~~~~~~~al 79 (320)
|++ |+||+|.||+.+...|..+.++ ++.++.-+. +..|+. ..+.+. .....+++++..-..+.|
T Consensus 5 k~a~vlGaTGaVGQrFi~lLsdhP~f------~ikvLgAS~---RSAGK~ya~a~~wkqt~~lp~~~~e~~V~ec~~~~F 75 (361)
T KOG4777|consen 5 KSAPVLGATGAVGQRFISLLSDHPYF------SIKVLGASK---RSAGKRYAFAGNWKQTDLLPESAHEYTVEECTADSF 75 (361)
T ss_pred cccceeeccchhHHHHHHHhccCCcc------eeeeecccc---cccCCceEecccchhcccccchhhhhhHhhcChhhc
Confidence 677 9999999999999999888775 677665431 112211 111111 111123444444456779
Q ss_pred CCCcEEEEeCC
Q 020875 80 TGVNIAVMVGG 90 (320)
Q Consensus 80 ~~aDvVi~~ag 90 (320)
.+||+|+...+
T Consensus 76 ~ecDIvfsgld 86 (361)
T KOG4777|consen 76 NECDIVFSGLD 86 (361)
T ss_pred ccccEEEecCC
Confidence 99999998654
No 462
>PRK07340 ornithine cyclodeaminase; Validated
Probab=95.92 E-value=0.049 Score=50.30 Aligned_cols=73 Identities=12% Similarity=0.049 Sum_probs=51.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHh-cCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCC
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIAR-GVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~-~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~a 82 (320)
...+++|+| +|..|...+..+.. .+. .+|.+++++. ++++..+..+.... ..+. ..+..+++.++
T Consensus 124 ~~~~v~IiG-aG~qa~~~~~al~~~~~~------~~v~v~~r~~--~~a~~~a~~~~~~~----~~~~-~~~~~~av~~a 189 (304)
T PRK07340 124 PPGDLLLIG-TGVQARAHLEAFAAGLPV------RRVWVRGRTA--ASAAAFCAHARALG----PTAE-PLDGEAIPEAV 189 (304)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHhCCC------CEEEEEcCCH--HHHHHHHHHHHhcC----CeeE-ECCHHHHhhcC
Confidence 357999999 69999999988865 443 2899999974 55555554443211 1222 35678899999
Q ss_pred cEEEEeCC
Q 020875 83 NIAVMVGG 90 (320)
Q Consensus 83 DvVi~~ag 90 (320)
|+||.+..
T Consensus 190 DiVitaT~ 197 (304)
T PRK07340 190 DLVVTATT 197 (304)
T ss_pred CEEEEccC
Confidence 99998754
No 463
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=95.92 E-value=0.0091 Score=53.79 Aligned_cols=112 Identities=14% Similarity=0.022 Sum_probs=70.2
Q ss_pred EEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEE-EecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcEE
Q 020875 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHM-LDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (320)
Q Consensus 7 kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l-~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDvV 85 (320)
-..|.||+||+|..++..|...|- .+.+ |.-++..-+-.-...||.+.. +...+.....+..++.+.+++|
T Consensus 63 VaTVFGAtGFlGryvvnklak~GS-------QviiPyR~d~~~~r~lkvmGdLGQvl-~~~fd~~DedSIr~vvk~sNVV 134 (391)
T KOG2865|consen 63 VATVFGATGFLGRYVVNKLAKMGS-------QVIIPYRGDEYDPRHLKVMGDLGQVL-FMKFDLRDEDSIRAVVKHSNVV 134 (391)
T ss_pred EEEEecccccccHHHHHHHhhcCC-------eEEEeccCCccchhheeeccccccee-eeccCCCCHHHHHHHHHhCcEE
Confidence 356889999999999999998875 3332 222211000001123333221 2223455555788899999999
Q ss_pred EEeCCCCCCCCCCH-HHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEc
Q 020875 86 VMVGGFPRKEGMER-KDVMSKNVSIYKAQASALEQHAAPNCKVLVVA 131 (320)
Q Consensus 86 i~~ag~~~~~~~~r-~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~s 131 (320)
|.+.|.- .+++ .++-+.|..+.+.+++.+++.+ - -++|-+|
T Consensus 135 INLIGrd---~eTknf~f~Dvn~~~aerlAricke~G-V-erfIhvS 176 (391)
T KOG2865|consen 135 INLIGRD---YETKNFSFEDVNVHIAERLARICKEAG-V-ERFIHVS 176 (391)
T ss_pred EEeeccc---cccCCcccccccchHHHHHHHHHHhhC-h-hheeehh
Confidence 9998742 1222 2456789999999999999886 2 2566655
No 464
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=95.88 E-value=0.042 Score=45.78 Aligned_cols=57 Identities=19% Similarity=0.256 Sum_probs=42.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCc
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aD 83 (320)
+.++|+|+|.+..||..++..|.+++. .|.+.+... .++.+.++.||
T Consensus 35 ~Gk~v~VvGrs~~VG~Pla~lL~~~~a-------tVt~~h~~T--------------------------~~l~~~~~~AD 81 (160)
T PF02882_consen 35 EGKKVVVVGRSNIVGKPLAMLLLNKGA-------TVTICHSKT--------------------------KNLQEITRRAD 81 (160)
T ss_dssp TT-EEEEE-TTTTTHHHHHHHHHHTT--------EEEEE-TTS--------------------------SSHHHHHTTSS
T ss_pred CCCEEEEECCcCCCChHHHHHHHhCCC-------eEEeccCCC--------------------------Ccccceeeecc
Confidence 357999999988999999999999875 787777531 14567789999
Q ss_pred EEEEeCCCCC
Q 020875 84 IAVMVGGFPR 93 (320)
Q Consensus 84 vVi~~ag~~~ 93 (320)
+||.++|.|.
T Consensus 82 IVVsa~G~~~ 91 (160)
T PF02882_consen 82 IVVSAVGKPN 91 (160)
T ss_dssp EEEE-SSSTT
T ss_pred EEeeeecccc
Confidence 9999998653
No 465
>PRK06901 aspartate-semialdehyde dehydrogenase; Provisional
Probab=95.85 E-value=0.022 Score=52.50 Aligned_cols=71 Identities=11% Similarity=0.144 Sum_probs=46.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDv 84 (320)
.++|+| ||+|.||..+...|-++++- ..+++|+.... +..|....+. ...+.+..-..++++++|+
T Consensus 3 ~~~iAi-GATg~VG~~~l~~Leer~fp----v~~l~l~~s~~---~s~gk~i~f~------g~~~~V~~l~~~~f~~vDi 68 (322)
T PRK06901 3 TLNIAI-AAEFELSEKLLEALEQSDLE----IEQISIVEIEP---FGEEQGIRFN------NKAVEQIAPEEVEWADFNY 68 (322)
T ss_pred cceEEE-ecCcHHHHHHHHHHHhcCCc----hhheeeccccc---ccCCCEEEEC------CEEEEEEECCccCcccCCE
Confidence 579999 99999999999988888752 23788887641 1122222221 2234443333457899999
Q ss_pred EEEeCC
Q 020875 85 AVMVGG 90 (320)
Q Consensus 85 Vi~~ag 90 (320)
+|+ +|
T Consensus 69 a~f-ag 73 (322)
T PRK06901 69 VFF-AG 73 (322)
T ss_pred EEE-cC
Confidence 999 65
No 466
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=95.84 E-value=0.59 Score=43.02 Aligned_cols=36 Identities=33% Similarity=0.499 Sum_probs=27.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEE-EEEecCC
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVIL-HMLDIPP 46 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev-~l~D~~~ 46 (320)
+++||+|+| +|++|..++..+.....+ ++ .++|+++
T Consensus 3 ~klrVAIIG-tG~IGt~hm~~l~~~~~v------elvAVvdid~ 39 (302)
T PRK08300 3 SKLKVAIIG-SGNIGTDLMIKILRSEHL------EPGAMVGIDP 39 (302)
T ss_pred CCCeEEEEc-CcHHHHHHHHHHhcCCCc------EEEEEEeCCh
Confidence 568999999 899999988777754322 54 4788864
No 467
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=95.83 E-value=0.031 Score=48.34 Aligned_cols=34 Identities=29% Similarity=0.389 Sum_probs=30.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCC
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~ 46 (320)
.++|+|+| .|.+|++++..|.+.|. +|+++|+++
T Consensus 28 gk~v~I~G-~G~vG~~~A~~L~~~G~-------~Vvv~D~~~ 61 (200)
T cd01075 28 GKTVAVQG-LGKVGYKLAEHLLEEGA-------KLIVADINE 61 (200)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEEcCCH
Confidence 47999999 69999999999999887 899999863
No 468
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=95.82 E-value=0.053 Score=52.46 Aligned_cols=73 Identities=21% Similarity=0.262 Sum_probs=49.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCc
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aD 83 (320)
...+|+|+| +|.+|..++..|...|.. +|.+++++. +++...+.++. ..+....+..+++.++|
T Consensus 181 ~~~~vlViG-aG~iG~~~a~~L~~~G~~------~V~v~~r~~--~ra~~la~~~g-------~~~~~~~~~~~~l~~aD 244 (423)
T PRK00045 181 SGKKVLVIG-AGEMGELVAKHLAEKGVR------KITVANRTL--ERAEELAEEFG-------GEAIPLDELPEALAEAD 244 (423)
T ss_pred cCCEEEEEC-chHHHHHHHHHHHHCCCC------eEEEEeCCH--HHHHHHHHHcC-------CcEeeHHHHHHHhccCC
Confidence 457999999 599999999999877752 788999863 33332222221 11222235567788999
Q ss_pred EEEEeCCCC
Q 020875 84 IAVMVGGFP 92 (320)
Q Consensus 84 vVi~~ag~~ 92 (320)
+||.+.+.+
T Consensus 245 vVI~aT~s~ 253 (423)
T PRK00045 245 IVISSTGAP 253 (423)
T ss_pred EEEECCCCC
Confidence 999987654
No 469
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=95.82 E-value=0.059 Score=49.70 Aligned_cols=76 Identities=7% Similarity=-0.010 Sum_probs=53.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCc
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aD 83 (320)
...+++|+| +|..|.+.+..+..-.-+ .+|.+++++. ++++..+.++.+. ...++....+..+++++||
T Consensus 116 da~~l~iiG-aG~QA~~~~~a~~~v~~i-----~~v~v~~r~~--~~a~~f~~~~~~~---~~~~v~~~~~~~eav~~aD 184 (301)
T PRK06407 116 NVENFTIIG-SGFQAETQLEGMASVYNP-----KRIRVYSRNF--DHARAFAERFSKE---FGVDIRPVDNAEAALRDAD 184 (301)
T ss_pred CCcEEEEEC-CcHHHHHHHHHHHhcCCC-----CEEEEECCCH--HHHHHHHHHHHHh---cCCcEEEeCCHHHHHhcCC
Confidence 457999999 699999887766653222 3899999974 5555555555432 1235666678899999999
Q ss_pred EEEEeCC
Q 020875 84 IAVMVGG 90 (320)
Q Consensus 84 vVi~~ag 90 (320)
+|+.+..
T Consensus 185 IV~taT~ 191 (301)
T PRK06407 185 TITSITN 191 (301)
T ss_pred EEEEecC
Confidence 9997643
No 470
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=95.80 E-value=0.033 Score=52.94 Aligned_cols=62 Identities=19% Similarity=0.216 Sum_probs=44.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDv 84 (320)
.++|+|+| .|.||+.++..|..-|. +|..+|.... + .+ +.. ...++.+.++.||+
T Consensus 116 gktvGIIG-~G~IG~~vA~~l~a~G~-------~V~~~dp~~~-~--~~------~~~--------~~~~L~ell~~sDi 170 (378)
T PRK15438 116 DRTVGIVG-VGNVGRRLQARLEALGI-------KTLLCDPPRA-D--RG------DEG--------DFRSLDELVQEADI 170 (378)
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHCCC-------EEEEECCccc-c--cc------ccc--------ccCCHHHHHhhCCE
Confidence 47999999 79999999999988776 8999996421 0 00 000 01267888899999
Q ss_pred EEEeCCC
Q 020875 85 AVMVGGF 91 (320)
Q Consensus 85 Vi~~ag~ 91 (320)
|++..-.
T Consensus 171 I~lh~PL 177 (378)
T PRK15438 171 LTFHTPL 177 (378)
T ss_pred EEEeCCC
Confidence 9986543
No 471
>PRK08618 ornithine cyclodeaminase; Validated
Probab=95.80 E-value=0.06 Score=50.21 Aligned_cols=74 Identities=14% Similarity=0.108 Sum_probs=50.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHh-cCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCc
Q 020875 5 PVRVLVTGAAGQIGYALVPMIAR-GVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~-~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aD 83 (320)
..+++|+| +|..|...+..++. .+. .+|.++|+++ ++++.....+.+. ....+....+..++++++|
T Consensus 127 ~~~v~iiG-aG~~a~~~~~al~~~~~~------~~v~v~~r~~--~~a~~~~~~~~~~---~~~~~~~~~~~~~~~~~aD 194 (325)
T PRK08618 127 AKTLCLIG-TGGQAKGQLEAVLAVRDI------ERVRVYSRTF--EKAYAFAQEIQSK---FNTEIYVVNSADEAIEEAD 194 (325)
T ss_pred CcEEEEEC-CcHHHHHHHHHHHhcCCc------cEEEEECCCH--HHHHHHHHHHHHh---cCCcEEEeCCHHHHHhcCC
Confidence 46899999 69999887766653 343 3899999874 4555444444321 1123444567788999999
Q ss_pred EEEEeCC
Q 020875 84 IAVMVGG 90 (320)
Q Consensus 84 vVi~~ag 90 (320)
+||.+..
T Consensus 195 iVi~aT~ 201 (325)
T PRK08618 195 IIVTVTN 201 (325)
T ss_pred EEEEccC
Confidence 9998754
No 472
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=95.80 E-value=0.031 Score=48.41 Aligned_cols=35 Identities=26% Similarity=0.372 Sum_probs=30.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecC
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP 45 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~ 45 (320)
+..||+|+| +|.+|+.++..|+..|. + ++.++|.+
T Consensus 20 ~~~~VlviG-~GglGs~ia~~La~~Gv-~-----~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIG-AGGLGSPAALYLAGAGV-G-----TIVIVDDD 54 (202)
T ss_pred cCCCEEEEC-CCHHHHHHHHHHHHcCC-C-----eEEEecCC
Confidence 356999999 69999999999999986 2 79999975
No 473
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.80 E-value=0.039 Score=51.72 Aligned_cols=34 Identities=32% Similarity=0.473 Sum_probs=30.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecC
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP 45 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~ 45 (320)
..||+|+| +|.+|++++..|+..|+ + ++.++|.+
T Consensus 24 ~~~VlIiG-~GglGs~va~~La~aGv-g-----~i~lvD~D 57 (338)
T PRK12475 24 EKHVLIVG-AGALGAANAEALVRAGI-G-----KLTIADRD 57 (338)
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHcCC-C-----EEEEEcCC
Confidence 46999999 69999999999999986 2 79999975
No 474
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.77 E-value=0.039 Score=51.74 Aligned_cols=34 Identities=32% Similarity=0.518 Sum_probs=30.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecC
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP 45 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~ 45 (320)
..||+|+| +|.+|+.++..|+..|. + ++.++|.+
T Consensus 24 ~~~VlVvG-~GglGs~va~~La~aGv-g-----~i~lvD~D 57 (339)
T PRK07688 24 EKHVLIIG-AGALGTANAEMLVRAGV-G-----KVTIVDRD 57 (339)
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHcCC-C-----eEEEEeCC
Confidence 46999999 59999999999999986 3 89999975
No 475
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.77 E-value=0.036 Score=50.89 Aligned_cols=56 Identities=18% Similarity=0.326 Sum_probs=45.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCc
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aD 83 (320)
..++|+|+|.+|.+|.+++..|.+.|. +|.++++.. . ++.+..+.||
T Consensus 158 ~Gk~V~vIG~s~ivG~PmA~~L~~~ga-------tVtv~~~~t--~------------------------~l~e~~~~AD 204 (301)
T PRK14194 158 TGKHAVVIGRSNIVGKPMAALLLQAHC-------SVTVVHSRS--T------------------------DAKALCRQAD 204 (301)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCC-------EEEEECCCC--C------------------------CHHHHHhcCC
Confidence 357999999767999999999999886 899998642 0 3567788999
Q ss_pred EEEEeCCCC
Q 020875 84 IAVMVGGFP 92 (320)
Q Consensus 84 vVi~~ag~~ 92 (320)
+||.+.|.+
T Consensus 205 IVIsavg~~ 213 (301)
T PRK14194 205 IVVAAVGRP 213 (301)
T ss_pred EEEEecCCh
Confidence 999998765
No 476
>PLN02858 fructose-bisphosphate aldolase
Probab=95.77 E-value=0.076 Score=58.60 Aligned_cols=70 Identities=19% Similarity=0.339 Sum_probs=50.5
Q ss_pred CCCCC-CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhc
Q 020875 1 MAKEP-VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC 79 (320)
Q Consensus 1 m~~~~-~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al 79 (320)
|+.++ +||+++| .|.+|.+++..|+..|+ +|..+|+++ +++. .+.+.. .....+..+++
T Consensus 319 ~~~~~~~~IGfIG-lG~MG~~mA~~L~~~G~-------~V~v~dr~~--~~~~----~l~~~G------a~~~~s~~e~~ 378 (1378)
T PLN02858 319 MQAKPVKRIGFIG-LGAMGFGMASHLLKSNF-------SVCGYDVYK--PTLV----RFENAG------GLAGNSPAEVA 378 (1378)
T ss_pred ccccCCCeEEEEC-chHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHH----HHHHcC------CeecCCHHHHH
Confidence 55544 7999999 79999999999999887 899999864 3322 222211 11234567888
Q ss_pred CCCcEEEEeCC
Q 020875 80 TGVNIAVMVGG 90 (320)
Q Consensus 80 ~~aDvVi~~ag 90 (320)
+++|+||++..
T Consensus 379 ~~aDvVi~~V~ 389 (1378)
T PLN02858 379 KDVDVLVIMVA 389 (1378)
T ss_pred hcCCEEEEecC
Confidence 99999999864
No 477
>PLN03139 formate dehydrogenase; Provisional
Probab=95.75 E-value=0.06 Score=51.34 Aligned_cols=65 Identities=20% Similarity=0.131 Sum_probs=45.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDv 84 (320)
.++|+|+| .|.||+.++..|..-|. +|..+|+.... .+ ...+ . .+....++.+.+++||+
T Consensus 199 gktVGIVG-~G~IG~~vA~~L~afG~-------~V~~~d~~~~~--~~-~~~~---~------g~~~~~~l~ell~~sDv 258 (386)
T PLN03139 199 GKTVGTVG-AGRIGRLLLQRLKPFNC-------NLLYHDRLKMD--PE-LEKE---T------GAKFEEDLDAMLPKCDV 258 (386)
T ss_pred CCEEEEEe-ecHHHHHHHHHHHHCCC-------EEEEECCCCcc--hh-hHhh---c------CceecCCHHHHHhhCCE
Confidence 47999999 79999999999987675 78899975311 11 0000 0 11222368888999999
Q ss_pred EEEeC
Q 020875 85 AVMVG 89 (320)
Q Consensus 85 Vi~~a 89 (320)
|++..
T Consensus 259 V~l~l 263 (386)
T PLN03139 259 VVINT 263 (386)
T ss_pred EEEeC
Confidence 99975
No 478
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=95.75 E-value=0.07 Score=49.12 Aligned_cols=68 Identities=16% Similarity=0.111 Sum_probs=46.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCc
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aD 83 (320)
...|++|+| .|.+|..++..|...|. +|.++|++. ++. ....++ . .+.....++.+.++++|
T Consensus 151 ~g~kvlViG-~G~iG~~~a~~L~~~Ga-------~V~v~~r~~--~~~-~~~~~~---G----~~~~~~~~l~~~l~~aD 212 (296)
T PRK08306 151 HGSNVLVLG-FGRTGMTLARTLKALGA-------NVTVGARKS--AHL-ARITEM---G----LSPFHLSELAEEVGKID 212 (296)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCC-------EEEEEECCH--HHH-HHHHHc---C----CeeecHHHHHHHhCCCC
Confidence 357999999 69999999999998775 899999873 211 111111 1 01111135667789999
Q ss_pred EEEEeC
Q 020875 84 IAVMVG 89 (320)
Q Consensus 84 vVi~~a 89 (320)
+||.+.
T Consensus 213 iVI~t~ 218 (296)
T PRK08306 213 IIFNTI 218 (296)
T ss_pred EEEECC
Confidence 999985
No 479
>PRK06823 ornithine cyclodeaminase; Validated
Probab=95.74 E-value=0.084 Score=49.01 Aligned_cols=75 Identities=16% Similarity=0.049 Sum_probs=52.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCc
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aD 83 (320)
...+++|+| +|..+.+.+..+..-.-+ .+|.+++++. ++++..+..+.+. ..++....+..+++++||
T Consensus 127 d~~~l~iiG-~G~qA~~~~~a~~~v~~i-----~~v~v~~r~~--~~a~~~~~~~~~~----~~~v~~~~~~~~av~~AD 194 (315)
T PRK06823 127 HVSAIGIVG-TGIQARMQLMYLKNVTDC-----RQLWVWGRSE--TALEEYRQYAQAL----GFAVNTTLDAAEVAHAAN 194 (315)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHhcCCC-----CEEEEECCCH--HHHHHHHHHHHhc----CCcEEEECCHHHHhcCCC
Confidence 457999999 799998888776653222 3899999974 4555444333321 235666678889999999
Q ss_pred EEEEeCC
Q 020875 84 IAVMVGG 90 (320)
Q Consensus 84 vVi~~ag 90 (320)
+|+.+..
T Consensus 195 IV~taT~ 201 (315)
T PRK06823 195 LIVTTTP 201 (315)
T ss_pred EEEEecC
Confidence 9997653
No 480
>KOG0409 consensus Predicted dehydrogenase [General function prediction only]
Probab=95.72 E-value=0.036 Score=50.39 Aligned_cols=68 Identities=16% Similarity=0.259 Sum_probs=51.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDv 84 (320)
.++|+-|| .|.+|++++..|+..|+ .|+.||+.. + ...+|.+.. -++..+..+..+++|+
T Consensus 35 ~~~iGFIG-LG~MG~~M~~nLik~G~-------kVtV~dr~~--~----k~~~f~~~G------a~v~~sPaeVae~sDv 94 (327)
T KOG0409|consen 35 KTRIGFIG-LGNMGSAMVSNLIKAGY-------KVTVYDRTK--D----KCKEFQEAG------ARVANSPAEVAEDSDV 94 (327)
T ss_pred cceeeEEe-eccchHHHHHHHHHcCC-------EEEEEeCcH--H----HHHHHHHhc------hhhhCCHHHHHhhcCE
Confidence 47999999 89999999999999998 899999863 2 233454432 1222356788899999
Q ss_pred EEEeCCCC
Q 020875 85 AVMVGGFP 92 (320)
Q Consensus 85 Vi~~ag~~ 92 (320)
||...+.|
T Consensus 95 vitmv~~~ 102 (327)
T KOG0409|consen 95 VITMVPNP 102 (327)
T ss_pred EEEEcCCh
Confidence 99986644
No 481
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=95.72 E-value=0.076 Score=49.54 Aligned_cols=74 Identities=19% Similarity=0.167 Sum_probs=52.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHh-cCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCc
Q 020875 5 PVRVLVTGAAGQIGYALVPMIAR-GVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~-~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aD 83 (320)
..+++|+| +|..|...+..|.. .++ .+|.+++++. ++++..+.++.+. ...++....+..+++.++|
T Consensus 129 ~~~v~iiG-aG~qA~~~~~al~~~~~i------~~v~V~~R~~--~~a~~~a~~~~~~---~g~~v~~~~~~~~av~~aD 196 (326)
T TIGR02992 129 SSVVAIFG-AGMQARLQLEALTLVRDI------RSARIWARDS--AKAEALALQLSSL---LGIDVTAATDPRAAMSGAD 196 (326)
T ss_pred CcEEEEEC-CCHHHHHHHHHHHHhCCc------cEEEEECCCH--HHHHHHHHHHHhh---cCceEEEeCCHHHHhccCC
Confidence 46899999 69999988888863 453 2799999874 5555555444321 1124455567888999999
Q ss_pred EEEEeCC
Q 020875 84 IAVMVGG 90 (320)
Q Consensus 84 vVi~~ag 90 (320)
+|+.+..
T Consensus 197 iVvtaT~ 203 (326)
T TIGR02992 197 IIVTTTP 203 (326)
T ss_pred EEEEecC
Confidence 9998754
No 482
>PRK07589 ornithine cyclodeaminase; Validated
Probab=95.69 E-value=0.065 Score=50.39 Aligned_cols=73 Identities=19% Similarity=0.194 Sum_probs=52.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHh-cCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCC
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIAR-GVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~-~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~a 82 (320)
...+++|+| +|..+.+.+..++. ..+ .+|.++++++ ++++....++.+. ..++....+.++++++|
T Consensus 128 da~~l~iiG-aG~QA~~~l~a~~~vr~i------~~V~v~~r~~--~~a~~~~~~~~~~----~~~v~~~~~~~~av~~A 194 (346)
T PRK07589 128 DSRTMALIG-NGAQSEFQALAFKALLGI------EEIRLYDIDP--AATAKLARNLAGP----GLRIVACRSVAEAVEGA 194 (346)
T ss_pred CCcEEEEEC-CcHHHHHHHHHHHHhCCc------eEEEEEeCCH--HHHHHHHHHHHhc----CCcEEEeCCHHHHHhcC
Confidence 357899999 69999887766654 333 3899999974 5555555555431 12466667899999999
Q ss_pred cEEEEeC
Q 020875 83 NIAVMVG 89 (320)
Q Consensus 83 DvVi~~a 89 (320)
|+|+.+.
T Consensus 195 DIIvtaT 201 (346)
T PRK07589 195 DIITTVT 201 (346)
T ss_pred CEEEEec
Confidence 9999865
No 483
>PRK06444 prephenate dehydrogenase; Provisional
Probab=95.69 E-value=0.025 Score=48.79 Aligned_cols=25 Identities=16% Similarity=0.454 Sum_probs=23.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCc
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVM 30 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~ 30 (320)
|||+|+||+|.+|+.++..+.+.|+
T Consensus 1 ~~~~iiG~~G~mG~~~~~~~~~~g~ 25 (197)
T PRK06444 1 MMEIIIGKNGRLGRVLCSILDDNGL 25 (197)
T ss_pred CEEEEEecCCcHHHHHHHHHHhCCC
Confidence 6999999999999999999998887
No 484
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=95.65 E-value=0.033 Score=47.73 Aligned_cols=77 Identities=9% Similarity=0.103 Sum_probs=49.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDv 84 (320)
.++|+|+|.+.-||.+++..|++++. .|.+.|++....+..+. .+.|...+. -....++.+.++.||+
T Consensus 62 GK~vvVIGrS~iVGkPla~lL~~~~A-------tVti~~~~~~~~~~~~~--~~~hs~t~~---~~~~~~l~~~~~~ADI 129 (197)
T cd01079 62 GKTITIINRSEVVGRPLAALLANDGA-------RVYSVDINGIQVFTRGE--SIRHEKHHV---TDEEAMTLDCLSQSDV 129 (197)
T ss_pred CCEEEEECCCccchHHHHHHHHHCCC-------EEEEEecCccccccccc--ccccccccc---cchhhHHHHHhhhCCE
Confidence 47999999999999999999998875 89999875311111110 111111000 0001126678899999
Q ss_pred EEEeCCCCC
Q 020875 85 AVMVGGFPR 93 (320)
Q Consensus 85 Vi~~ag~~~ 93 (320)
||.++|.+.
T Consensus 130 VIsAvG~~~ 138 (197)
T cd01079 130 VITGVPSPN 138 (197)
T ss_pred EEEccCCCC
Confidence 999998664
No 485
>PLN02928 oxidoreductase family protein
Probab=95.64 E-value=0.048 Score=51.38 Aligned_cols=104 Identities=15% Similarity=0.140 Sum_probs=59.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccC-CCCcceEEeCChhhhcCCCc
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVEACTGVN 83 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~-~~~~~v~~~~~~~~al~~aD 83 (320)
.++|+|+| .|.||+.++..|..-|. +|..+|+....+ ......+..... ..........++.+.++.||
T Consensus 159 gktvGIiG-~G~IG~~vA~~l~afG~-------~V~~~dr~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aD 228 (347)
T PLN02928 159 GKTVFILG-YGAIGIELAKRLRPFGV-------KLLATRRSWTSE--PEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEAD 228 (347)
T ss_pred CCEEEEEC-CCHHHHHHHHHHhhCCC-------EEEEECCCCChh--hhhhhccccccccccccccCcccCHHHHHhhCC
Confidence 46999999 79999999999988776 899999853111 100000000000 00000011247889999999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcC
Q 020875 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN 132 (320)
Q Consensus 84 vVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~sn 132 (320)
+|++...... .++ .++ | .+.+.+.. |++++|+++-
T Consensus 229 iVvl~lPlt~---~T~-~li--~-------~~~l~~Mk-~ga~lINvaR 263 (347)
T PLN02928 229 IVVLCCTLTK---ETA-GIV--N-------DEFLSSMK-KGALLVNIAR 263 (347)
T ss_pred EEEECCCCCh---Hhh-ccc--C-------HHHHhcCC-CCeEEEECCC
Confidence 9999864321 111 111 1 23333333 6788999873
No 486
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.64 E-value=0.078 Score=48.02 Aligned_cols=73 Identities=12% Similarity=0.068 Sum_probs=47.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDv 84 (320)
.++++|+|+ |.+|.+++..|+..|. +|.+++++. ++++....++.... .+.........+.++|+
T Consensus 117 ~k~vliiGa-Gg~g~aia~~L~~~g~-------~v~v~~R~~--~~~~~la~~~~~~~-----~~~~~~~~~~~~~~~Di 181 (270)
T TIGR00507 117 NQRVLIIGA-GGAARAVALPLLKADC-------NVIIANRTV--SKAEELAERFQRYG-----EIQAFSMDELPLHRVDL 181 (270)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHhhcC-----ceEEechhhhcccCccE
Confidence 468999994 9999999999998775 788999863 44443333332211 11111111233468999
Q ss_pred EEEeCCCC
Q 020875 85 AVMVGGFP 92 (320)
Q Consensus 85 Vi~~ag~~ 92 (320)
||.+.+..
T Consensus 182 vInatp~g 189 (270)
T TIGR00507 182 IINATSAG 189 (270)
T ss_pred EEECCCCC
Confidence 99987654
No 487
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=95.64 E-value=0.009 Score=53.83 Aligned_cols=121 Identities=9% Similarity=-0.010 Sum_probs=75.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHH-HHHHHhcccCC----CCcceEEeCChhhhcC
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG-VKMELVDAAFP----LLKGVVATTDAVEACT 80 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~-~~~dl~~~~~~----~~~~v~~~~~~~~al~ 80 (320)
+.-+|||-+|+.|+-|+..|++.|+ +|+-+.++.+.-.... ....+-+...+ ...+++..+++..+++
T Consensus 3 K~ALITGITGQDGsYLa~lLLekGY-------~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~ 75 (345)
T COG1089 3 KVALITGITGQDGSYLAELLLEKGY-------EVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILE 75 (345)
T ss_pred ceEEEecccCCchHHHHHHHHhcCc-------EEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHH
Confidence 3567899999999999999999998 8886665421111110 00011111111 1245555556666665
Q ss_pred --CCcEEEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q 020875 81 --GVNIAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANP 133 (320)
Q Consensus 81 --~aDvVi~~ag~~~~--~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP 133 (320)
..|-|.++|+.... +-+++......+.-.+..++++|+..+++++++--+|.+
T Consensus 76 ~v~PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStS 132 (345)
T COG1089 76 EVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTS 132 (345)
T ss_pred hcCchhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccH
Confidence 56899999875432 223333445667788899999999998447777666643
No 488
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=95.63 E-value=0.04 Score=52.48 Aligned_cols=62 Identities=15% Similarity=0.075 Sum_probs=45.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDv 84 (320)
.++|+|+| .|.||+.++..|..-|+ +|.++|.... ... .. .. ..++.+.+++||+
T Consensus 116 gktvGIIG-~G~IG~~va~~l~a~G~-------~V~~~Dp~~~--~~~-------~~-------~~-~~~l~ell~~aDi 170 (381)
T PRK00257 116 ERTYGVVG-AGHVGGRLVRVLRGLGW-------KVLVCDPPRQ--EAE-------GD-------GD-FVSLERILEECDV 170 (381)
T ss_pred cCEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEECCccc--ccc-------cC-------cc-ccCHHHHHhhCCE
Confidence 46999999 79999999999998786 8999997421 110 00 00 1257788899999
Q ss_pred EEEeCCC
Q 020875 85 AVMVGGF 91 (320)
Q Consensus 85 Vi~~ag~ 91 (320)
|++....
T Consensus 171 V~lh~Pl 177 (381)
T PRK00257 171 ISLHTPL 177 (381)
T ss_pred EEEeCcC
Confidence 9987643
No 489
>PRK13301 putative L-aspartate dehydrogenase; Provisional
Probab=95.63 E-value=0.1 Score=46.89 Aligned_cols=87 Identities=13% Similarity=0.087 Sum_probs=54.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEE-EEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhh-cCCC
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILH-MLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA-CTGV 82 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~-l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~a-l~~a 82 (320)
.+||+|+| +|.+|+.++..|...... ..++. ++|+.. ++.+ .+.+. +...+++.+. ....
T Consensus 2 ~~rvgiIG-~GaIG~~va~~l~~~~~~----~~~l~~V~~~~~--~~~~----~~~~~-------~~~~~~l~~ll~~~~ 63 (267)
T PRK13301 2 THRIAFIG-LGAIASDVAAGLLADAAQ----PCQLAALTRNAA--DLPP----ALAGR-------VALLDGLPGLLAWRP 63 (267)
T ss_pred ceEEEEEC-ccHHHHHHHHHHhcCCCC----ceEEEEEecCCH--HHHH----Hhhcc-------CcccCCHHHHhhcCC
Confidence 36999999 799999999988765321 12444 455542 2222 22221 1223355553 3789
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeE
Q 020875 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCK 126 (320)
Q Consensus 83 DvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~ 126 (320)
|+|+-+|+. ..++++++.+-+.+ .+..
T Consensus 64 DlVVE~A~~----------------~av~e~~~~iL~~g-~dlv 90 (267)
T PRK13301 64 DLVVEAAGQ----------------QAIAEHAEGCLTAG-LDMI 90 (267)
T ss_pred CEEEECCCH----------------HHHHHHHHHHHhcC-CCEE
Confidence 999999862 46788888888776 5543
No 490
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=95.62 E-value=0.054 Score=52.73 Aligned_cols=90 Identities=13% Similarity=0.098 Sum_probs=57.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDv 84 (320)
.++|+|+| .|.||..++..|...|. +|.++|+++. +.. .+.. +.. .. .++.++++.+|+
T Consensus 254 GKtVgVIG-~G~IGr~vA~rL~a~Ga-------~ViV~e~dp~--~a~-~A~~--~G~-------~~-~~leell~~ADI 312 (476)
T PTZ00075 254 GKTVVVCG-YGDVGKGCAQALRGFGA-------RVVVTEIDPI--CAL-QAAM--EGY-------QV-VTLEDVVETADI 312 (476)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEEeCCch--hHH-HHHh--cCc-------ee-ccHHHHHhcCCE
Confidence 46999999 69999999999998776 7888987642 211 1111 111 11 246788999999
Q ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCc
Q 020875 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANP 133 (320)
Q Consensus 85 Vi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP 133 (320)
||.+.|.+. + +. .+.+.... |++++++++-.
T Consensus 313 VI~atGt~~--------i-------I~--~e~~~~MK-pGAiLINvGr~ 343 (476)
T PTZ00075 313 FVTATGNKD--------I-------IT--LEHMRRMK-NNAIVGNIGHF 343 (476)
T ss_pred EEECCCccc--------c-------cC--HHHHhccC-CCcEEEEcCCC
Confidence 999865321 0 10 12333333 67889988854
No 491
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=95.62 E-value=0.045 Score=54.45 Aligned_cols=65 Identities=20% Similarity=0.099 Sum_probs=46.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDv 84 (320)
.++|+|+| .|.+|+.++..|...|+ +|..+|+....+ ...++ .+....++.+.+++||+
T Consensus 138 gktvgIiG-~G~IG~~vA~~l~~fG~-------~V~~~d~~~~~~----~~~~~---------g~~~~~~l~ell~~aDv 196 (525)
T TIGR01327 138 GKTLGVIG-LGRIGSIVAKRAKAFGM-------KVLAYDPYISPE----RAEQL---------GVELVDDLDELLARADF 196 (525)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCC-------EEEEECCCCChh----HHHhc---------CCEEcCCHHHHHhhCCE
Confidence 36999999 79999999999988776 899999742111 11111 11222368888999999
Q ss_pred EEEeCC
Q 020875 85 AVMVGG 90 (320)
Q Consensus 85 Vi~~ag 90 (320)
|++...
T Consensus 197 V~l~lP 202 (525)
T TIGR01327 197 ITVHTP 202 (525)
T ss_pred EEEccC
Confidence 999764
No 492
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.61 E-value=0.044 Score=50.06 Aligned_cols=56 Identities=16% Similarity=0.196 Sum_probs=43.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCc
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aD 83 (320)
+..+|+|+|++|.+|.+++..|++.+. +|.++++.. . ++.+.++++|
T Consensus 158 ~Gk~vvViG~gg~vGkpia~~L~~~ga-------tVtv~~~~t---------~-----------------~L~~~~~~aD 204 (283)
T PRK14192 158 AGKHAVVVGRSAILGKPMAMMLLNANA-------TVTICHSRT---------Q-----------------NLPELVKQAD 204 (283)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHhCCC-------EEEEEeCCc---------h-----------------hHHHHhccCC
Confidence 346999999766799999999998875 788888521 0 2445568999
Q ss_pred EEEEeCCCC
Q 020875 84 IAVMVGGFP 92 (320)
Q Consensus 84 vVi~~ag~~ 92 (320)
+||.+.|.+
T Consensus 205 IvI~AtG~~ 213 (283)
T PRK14192 205 IIVGAVGKP 213 (283)
T ss_pred EEEEccCCC
Confidence 999998743
No 493
>TIGR00465 ilvC ketol-acid reductoisomerase. This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway
Probab=95.61 E-value=0.033 Score=51.70 Aligned_cols=65 Identities=12% Similarity=0.038 Sum_probs=43.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDv 84 (320)
.+||+|+| .|.+|.+++..|...|+ ++++.+.... +... . +... .+.. .+..+++++||+
T Consensus 3 ~kkIgiIG-~G~mG~AiA~~L~~sG~-------~Viv~~~~~~-~~~~-~---a~~~------Gv~~-~s~~ea~~~ADi 62 (314)
T TIGR00465 3 GKTVAIIG-YGSQGHAQALNLRDSGL-------NVIVGLRKGG-ASWK-K---ATED------GFKV-GTVEEAIPQADL 62 (314)
T ss_pred cCEEEEEe-EcHHHHHHHHHHHHCCC-------eEEEEECcCh-hhHH-H---HHHC------CCEE-CCHHHHHhcCCE
Confidence 46999999 69999999999999886 5665554321 1111 1 1111 1122 246778899999
Q ss_pred EEEeC
Q 020875 85 AVMVG 89 (320)
Q Consensus 85 Vi~~a 89 (320)
|+++.
T Consensus 63 VvLaV 67 (314)
T TIGR00465 63 IMNLL 67 (314)
T ss_pred EEEeC
Confidence 99986
No 494
>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional
Probab=95.60 E-value=0.18 Score=52.33 Aligned_cols=69 Identities=22% Similarity=0.241 Sum_probs=46.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcEE
Q 020875 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (320)
Q Consensus 6 ~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDvV 85 (320)
.||+|+| .|.+|..++..|...|+. .+|..+|+++ ++++. ..+. .. .....++..++++++|+|
T Consensus 4 ~~I~IIG-~G~mG~ala~~l~~~G~~-----~~V~~~d~~~--~~~~~-a~~~--g~-----~~~~~~~~~~~~~~aDvV 67 (735)
T PRK14806 4 GRVVVIG-LGLIGGSFAKALRERGLA-----REVVAVDRRA--KSLEL-AVSL--GV-----IDRGEEDLAEAVSGADVI 67 (735)
T ss_pred cEEEEEe-eCHHHHHHHHHHHhcCCC-----CEEEEEECCh--hHHHH-HHHC--CC-----CCcccCCHHHHhcCCCEE
Confidence 6899999 699999999999988742 1689999874 22221 1111 10 001223566778999999
Q ss_pred EEeCC
Q 020875 86 VMVGG 90 (320)
Q Consensus 86 i~~ag 90 (320)
|++..
T Consensus 68 ilavp 72 (735)
T PRK14806 68 VLAVP 72 (735)
T ss_pred EECCC
Confidence 99753
No 495
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=95.60 E-value=0.042 Score=52.93 Aligned_cols=75 Identities=13% Similarity=0.123 Sum_probs=52.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCc
Q 020875 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (320)
Q Consensus 4 ~~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aD 83 (320)
...||+|+| +|.+|..++..|...|.. ++.+++++. ++++..+..+.. ..+....++.+.+.++|
T Consensus 180 ~~kkvlviG-aG~~a~~va~~L~~~g~~------~I~V~nRt~--~ra~~La~~~~~------~~~~~~~~l~~~l~~aD 244 (414)
T PRK13940 180 SSKNVLIIG-AGQTGELLFRHVTALAPK------QIMLANRTI--EKAQKITSAFRN------ASAHYLSELPQLIKKAD 244 (414)
T ss_pred cCCEEEEEc-CcHHHHHHHHHHHHcCCC------EEEEECCCH--HHHHHHHHHhcC------CeEecHHHHHHHhccCC
Confidence 346999999 599999999999988862 789999863 344333332211 11222235678899999
Q ss_pred EEEEeCCCCC
Q 020875 84 IAVMVGGFPR 93 (320)
Q Consensus 84 vVi~~ag~~~ 93 (320)
+||.+.+.|.
T Consensus 245 iVI~aT~a~~ 254 (414)
T PRK13940 245 IIIAAVNVLE 254 (414)
T ss_pred EEEECcCCCC
Confidence 9999887654
No 496
>PRK12557 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein; Provisional
Probab=95.59 E-value=0.19 Score=47.20 Aligned_cols=58 Identities=17% Similarity=0.133 Sum_probs=38.3
Q ss_pred hHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHH-HhcccCCCCcceEEeCChhhhcCCCcEEEEeC
Q 020875 17 IGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKME-LVDAAFPLLKGVVATTDAVEACTGVNIAVMVG 89 (320)
Q Consensus 17 vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~d-l~~~~~~~~~~v~~~~~~~~al~~aDvVi~~a 89 (320)
=|..++..|+..|+ +|.++|+++ +.+.....+ +.+ ..+...++..++++++|+||++.
T Consensus 31 gG~~MA~~La~aG~-------~V~v~Dr~~--~~l~~~~~~~l~~------~Gi~~asd~~eaa~~ADvVIlaV 89 (342)
T PRK12557 31 GGSRMAIEFAEAGH-------DVVLAEPNR--SILSEELWKKVED------AGVKVVSDDAEAAKHGEIHILFT 89 (342)
T ss_pred CHHHHHHHHHhCCC-------eEEEEECCH--HHhhHHHHHHHHH------CCCEEeCCHHHHHhCCCEEEEEC
Confidence 37888999998887 899999864 222111111 211 12445557778889999999984
No 497
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=95.59 E-value=0.041 Score=46.24 Aligned_cols=55 Identities=16% Similarity=0.286 Sum_probs=43.0
Q ss_pred CCCEEEEEcCCCh-hHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCC
Q 020875 4 EPVRVLVTGAAGQ-IGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (320)
Q Consensus 4 ~~~kI~IiGA~G~-vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~a 82 (320)
+..||+|+|+ |. +|..++..|...|. .+.+.+++. .++.+.+++|
T Consensus 43 ~gk~vlViG~-G~~~G~~~a~~L~~~g~-------~V~v~~r~~--------------------------~~l~~~l~~a 88 (168)
T cd01080 43 AGKKVVVVGR-SNIVGKPLAALLLNRNA-------TVTVCHSKT--------------------------KNLKEHTKQA 88 (168)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHhhCCC-------EEEEEECCc--------------------------hhHHHHHhhC
Confidence 3479999995 75 69989999998875 688888641 1456788999
Q ss_pred cEEEEeCCCC
Q 020875 83 NIAVMVGGFP 92 (320)
Q Consensus 83 DvVi~~ag~~ 92 (320)
|+||.+.+.+
T Consensus 89 DiVIsat~~~ 98 (168)
T cd01080 89 DIVIVAVGKP 98 (168)
T ss_pred CEEEEcCCCC
Confidence 9999987755
No 498
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=95.57 E-value=0.1 Score=50.17 Aligned_cols=65 Identities=15% Similarity=0.093 Sum_probs=45.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDv 84 (320)
..+|+|+| .|.+|..++..+...|. +|+++|+++ .++. .+..+ .. .. ....++++++|+
T Consensus 202 GktVvViG-~G~IG~~va~~ak~~Ga-------~ViV~d~d~--~R~~-~A~~~--G~-------~~-~~~~e~v~~aDV 260 (413)
T cd00401 202 GKVAVVAG-YGDVGKGCAQSLRGQGA-------RVIVTEVDP--ICAL-QAAME--GY-------EV-MTMEEAVKEGDI 260 (413)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEEECCh--hhHH-HHHhc--CC-------EE-ccHHHHHcCCCE
Confidence 46999999 69999999999988886 788899864 2222 12111 11 11 134577889999
Q ss_pred EEEeCC
Q 020875 85 AVMVGG 90 (320)
Q Consensus 85 Vi~~ag 90 (320)
||.+.|
T Consensus 261 VI~atG 266 (413)
T cd00401 261 FVTTTG 266 (413)
T ss_pred EEECCC
Confidence 998866
No 499
>KOG2305 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]
Probab=95.54 E-value=0.033 Score=48.59 Aligned_cols=112 Identities=19% Similarity=0.214 Sum_probs=66.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCcc--chhHHHHHHHhccc--CCC---------CcceEE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA--EALNGVKMELVDAA--FPL---------LKGVVA 71 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~--~~~~~~~~dl~~~~--~~~---------~~~v~~ 71 (320)
.-||+|+| +|-+|+..+...+..|+ +|.|||+.+.. ..++...-|+.+.. ..+ ..-+..
T Consensus 3 ~~ki~ivg-Sgl~g~~WAmlFAs~Gy-------qVqlYDI~e~Ql~~ALen~~Kel~~Lee~g~lrGnlsa~eqla~is~ 74 (313)
T KOG2305|consen 3 FGKIAIVG-SGLVGSSWAMLFASSGY-------QVQLYDILEKQLQTALENVEKELRKLEEHGLLRGNLSADEQLALISG 74 (313)
T ss_pred ccceeEee-cccccchHHHHHhccCc-------eEEEeeccHHHHHHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhC
Confidence 34999999 89999999999999998 89999997521 11122222332211 011 123455
Q ss_pred eCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHhhhcCCCeEEEEEcCcchhhHHH
Q 020875 72 TTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI 140 (320)
Q Consensus 72 ~~~~~~al~~aDvVi~~ag~~~~~~~~r~~~~~~n~~~~~~i~~~i~~~~~~~~~viv~snP~~~~~~~ 140 (320)
++++.+..++|=.|=-+ .-..+..-+.+.+++.....| ..|+.|+....+...
T Consensus 75 t~~l~E~vk~Ai~iQEc--------------vpE~L~lkk~ly~qlD~i~d~--~tIlaSSTSt~mpS~ 127 (313)
T KOG2305|consen 75 TTSLNELVKGAIHIQEC--------------VPEDLNLKKQLYKQLDEIADP--TTILASSTSTFMPSK 127 (313)
T ss_pred CccHHHHHhhhhhHHhh--------------chHhhHHHHHHHHHHHHhcCC--ceEEeccccccChHH
Confidence 66777777776322111 112233446677777776634 456677666555443
No 500
>PLN00203 glutamyl-tRNA reductase
Probab=95.49 E-value=0.082 Score=52.41 Aligned_cols=75 Identities=17% Similarity=0.233 Sum_probs=49.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHhcCcCCCCCCeEEEEEecCCccchhHHHHHHHhcccCCCCcceEEeCChhhhcCCCcE
Q 020875 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (320)
Q Consensus 5 ~~kI~IiGA~G~vG~~la~~L~~~~~~~~~~~~ev~l~D~~~~~~~~~~~~~dl~~~~~~~~~~v~~~~~~~~al~~aDv 84 (320)
..||+|+| +|.+|..++..|...|.. +|.+++++. +++......+.... ..+....+..+++.++|+
T Consensus 266 ~kkVlVIG-AG~mG~~~a~~L~~~G~~------~V~V~nRs~--era~~La~~~~g~~----i~~~~~~dl~~al~~aDV 332 (519)
T PLN00203 266 SARVLVIG-AGKMGKLLVKHLVSKGCT------KMVVVNRSE--ERVAALREEFPDVE----IIYKPLDEMLACAAEADV 332 (519)
T ss_pred CCEEEEEe-CHHHHHHHHHHHHhCCCC------eEEEEeCCH--HHHHHHHHHhCCCc----eEeecHhhHHHHHhcCCE
Confidence 57999999 599999999999888752 799999864 44433332221100 011122356788899999
Q ss_pred EEEeCCCC
Q 020875 85 AVMVGGFP 92 (320)
Q Consensus 85 Vi~~ag~~ 92 (320)
||.+.+.+
T Consensus 333 VIsAT~s~ 340 (519)
T PLN00203 333 VFTSTSSE 340 (519)
T ss_pred EEEccCCC
Confidence 99876543
Done!