BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020876
(320 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LBZ4|OTU_ARATH OTU domain-containing protein At3g57810 OS=Arabidopsis thaliana
GN=At3g57810 PE=2 SV=1
Length = 317
Score = 195 bits (496), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 86/138 (62%), Positives = 110/138 (79%), Gaps = 2/138 (1%)
Query: 176 FKVTGVLADGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDELLKRRKETEWF 235
+ + G+ DGRCLFR++AHG CLRSG+ P E+ QRELADELR +V DE ++RR+ETEWF
Sbjct: 168 YSIIGIPGDGRCLFRSVAHGFCLRSGKLAPGEKMQRELADELRTRVADEFIQRRQETEWF 227
Query: 236 IEGDFDTYVKEIQQPYVWGGEPELLMASHVLKKPIAVFMVVQSSGNLVNIANYGEEYQKD 295
+EGDFDTYV++I+ P+VWGGEPEL MASHVL+ PI V+M +G L++IA YG+EY KD
Sbjct: 228 VEGDFDTYVRQIRDPHVWGGEPELFMASHVLQMPITVYMKDDKAGGLISIAEYGQEYGKD 287
Query: 296 KESPINVLFHGYGHYDIL 313
PI VL+HG+GHYD L
Sbjct: 288 --DPIRVLYHGFGHYDAL 303
>sp|Q6GM06|OTU6B_XENLA OTU domain-containing protein 6B OS=Xenopus laevis GN=otud6b PE=2
SV=1
Length = 294
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 76/166 (45%), Gaps = 33/166 (19%)
Query: 166 KRCEIINERPFKVTGVLADGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDEL 225
K +I+ ER ++ + +DG C++RAI H +E+ LR+Q D +
Sbjct: 140 KLAQILAERELQIRQIPSDGHCMYRAIEHQL---------NEQGNSLTVANLRSQTADYM 190
Query: 226 LKRRKET----------EWFIEGDFDTYVKEIQQPYVWGGEPELLMASHVLKKPIAVFMV 275
KR ++ + + + +F Y +I WGG+ EL SH+LK PI V
Sbjct: 191 QKRAEDFLPFLTNSSTGDMYTQEEFQKYCTDIVNTPAWGGQLELRALSHILKTPIE---V 247
Query: 276 VQSSGNLVNIANYGEEYQKDKESPINVLF--HGYG---HYDILETF 316
+Q+ + I GEEY PI +++ H YG HY+ +E
Sbjct: 248 IQAESLPIVI---GEEYSN---KPITLVYMRHAYGLGEHYNSVEQL 287
>sp|B2RRE7|OTUD4_MOUSE OTU domain-containing protein 4 OS=Mus musculus GN=Otud4 PE=1 SV=1
Length = 1107
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 19/133 (14%)
Query: 181 VLADGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDELLKRRKETEWFIEGDF 240
V DG CLFRA+A V E+R + L + R++ E FIEG F
Sbjct: 39 VAKDGSCLFRAVAEQVLHSQSRHV-----------EVRMACIRYLRENREKFEAFIEGSF 87
Query: 241 DTYVKEIQQPYVWGGEPELLMASHVLKKPIAVFMVVQSSGNLVNIANYGEEYQKDKESPI 300
+ Y+K ++ P W G+ E+ S + +K ++ S + V N+ E+ +
Sbjct: 88 EEYLKRLENPQEWVGQVEISALSLMYRKDFVIYQEPNVSPSHVTENNFPEK--------V 139
Query: 301 NVLFHGYGHYDIL 313
+ F HYDI+
Sbjct: 140 LLCFSNGNHYDIV 152
>sp|Q01804|OTUD4_HUMAN OTU domain-containing protein 4 OS=Homo sapiens GN=OTUD4 PE=1 SV=3
Length = 1113
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 19/133 (14%)
Query: 181 VLADGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDELLKRRKETEWFIEGDF 240
V DG CLFRA+A V E+R + L + R++ E FIEG F
Sbjct: 39 VAKDGSCLFRAVAEQVLHSQSRHV-----------EVRMACIHYLRENREKFEAFIEGSF 87
Query: 241 DTYVKEIQQPYVWGGEPELLMASHVLKKPIAVFMVVQSSGNLVNIANYGEEYQKDKESPI 300
+ Y+K ++ P W G+ E+ S + +K ++ S + V N+ E+ +
Sbjct: 88 EEYLKRLENPQEWVGQVEISALSLMYRKDFIIYREPNVSPSQVTENNFPEK--------V 139
Query: 301 NVLFHGYGHYDIL 313
+ F HYDI+
Sbjct: 140 LLCFSNGNHYDIV 152
>sp|Q5M8L0|OTU6B_XENTR OTU domain-containing protein 6B OS=Xenopus tropicalis GN=otud6b
PE=2 SV=1
Length = 294
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 13/156 (8%)
Query: 166 KRCEIINERPFKVTGVLADGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDEL 225
K I+ ER ++ + +DG C++RAI H R G ++ + + AD ++ D L
Sbjct: 140 KLARILAERELQIRQIPSDGHCMYRAIEHQLRER-GNDLTVANLRSQTADYMQNHAEDFL 198
Query: 226 --LKRRKETEWFIEGDFDTYVKEIQQPYVWGGEPELLMASHVLKKPIAVFMVVQSSGNLV 283
L + + + +F Y +I WGG+ EL SH+LK I V+Q+ + +
Sbjct: 199 PFLTNSSTGDMYTQEEFLKYCTDIVNTPAWGGQLELRALSHILKTAIE---VIQAESSPI 255
Query: 284 NIANYGEEYQKDKESPINVLFHGYG---HYDILETF 316
I GEEY K + + H YG HY+ +E
Sbjct: 256 VI---GEEY-SSKAITLVYMRHAYGLGEHYNSVELL 287
>sp|Q7ZV00|OTU6B_DANRE OTU domain-containing protein 6B OS=Danio rerio GN=otud6b PE=2 SV=1
Length = 293
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 165 VKRCEIINERPFKVTGVLADGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDE 224
+K E + ER ++ + +DG C++RA+ H R G + +E + + A +R+ D
Sbjct: 136 LKLREKLVERHLQIKEISSDGHCMYRAVEHQLTER-GLALGLKELRDQTAQYMRSHADDF 194
Query: 225 L--LKRRKETEWFIEGDFDTYVKEIQQPYVWGGEPELLMASHVLKKPIAVFMVVQSSGNL 282
+ L + + +F+ Y ++ WGG+ EL S VL+ PI V+Q+
Sbjct: 195 MPFLTNPNTGDMYTAEEFEKYCSDVADTAAWGGQLELKALSQVLQLPIE---VIQADSPC 251
Query: 283 VNIANYGEEYQKDKESPINVLFHGYG---HYDILETFSE 318
+ I GEEY K K + I + H YG HY+ +E +
Sbjct: 252 ITI---GEEYDKPKITLI-YMRHAYGLGEHYNSVEPLKD 286
>sp|Q7L8S5|OTU6A_HUMAN OTU domain-containing protein 6A OS=Homo sapiens GN=OTUD6A PE=2
SV=1
Length = 288
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 17/147 (11%)
Query: 166 KRCEIINERPFKVTGVLADGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDEL 225
K I+ R ++ + ADG C++RAI E+ R + VDE
Sbjct: 131 KLAAILGARGLEMKAIPADGHCMYRAIQDQLVFSVSVEM-----LRCRTASYMKKHVDEF 185
Query: 226 L---KRRKETEWFIEGDFDTYVKEIQQPYVWGGEPELLMASHVLKKPIAVFMVVQSSGNL 282
L + ++ F DF Y I + WGG+ EL SHVLK PI V+Q+
Sbjct: 186 LPFFSNPETSDSFGYDDFMIYCDNIVRTTAWGGQLELRALSHVLKTPIE---VIQADSPT 242
Query: 283 VNIANYGEEYQKDKESPINVLFHGYGH 309
+ I GEEY K PI +++ Y +
Sbjct: 243 LII---GEEYVK---KPIILVYLRYAY 263
>sp|P38747|OTU2_YEAST OTU domain-containing protein 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=OTU2 PE=1 SV=1
Length = 307
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 67/153 (43%), Gaps = 17/153 (11%)
Query: 168 CEIINERPFKVTGVLADGRCLFRAIAHGACLRSGEEVPDEE----RQRELADELRAQVVD 223
CE+ + K + DG CLF +I LR + D++ + R L+ + D
Sbjct: 162 CEL---KKLKQFDIQPDGHCLFASILDQLKLRHDPKKLDQDMDVMKLRWLSCNYVQEHRD 218
Query: 224 ELLKRRKETEWFIEGDFDTYVKEIQQPYVWGGEPELLMASHVLKKPIAVFMVVQSSGNLV 283
+ + + E D D Y KE++ WGGE E+L SHV PI++ M SG +
Sbjct: 219 DFIPYLFDEETMKMKDIDEYTKEMEHTAQWGGEIEILALSHVFDCPISILM----SGRPI 274
Query: 284 NIANYGEEYQKDKESPINVLFHGYG---HYDIL 313
+ N E K+ E + H Y HY+ L
Sbjct: 275 QVYN---ECGKNPELKLVYYKHSYALGEHYNSL 304
>sp|Q6IE21|OTU6A_MOUSE OTU domain-containing protein 6A OS=Mus musculus GN=Otud6a PE=2
SV=1
Length = 290
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 17/146 (11%)
Query: 166 KRCEIINERPFKVTGVLADGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDEL 225
K I+ + ++ + ADG C++RAI V E + A +R + D+
Sbjct: 132 KVAAILGAKNLEMKTIPADGHCMYRAIQDQLVF----SVTIESLRYRTAYYMRKHI-DDF 186
Query: 226 LKRRKETE---WFIEGDFDTYVKEIQQPYVWGGEPELLMASHVLKKPIAVFMVVQSSGNL 282
L E E ++ DF Y +I WGG+ EL SHVL+ PI VVQ++
Sbjct: 187 LPFFTEPEAGNFYTREDFLRYCDDIVHNASWGGQLELRALSHVLQTPIE---VVQANSPT 243
Query: 283 VNIANYGEEYQKDKESPINVLFHGYG 308
+ I GEEY + P+ +++ Y
Sbjct: 244 IVI---GEEYTR---KPVTLVYLHYA 263
>sp|P22856|VL96_IRV1 Putative ubiquitin thioesterase L96 OS=Tipula iridescent virus
GN=L96 PE=3 SV=1
Length = 867
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 28/146 (19%)
Query: 156 GGGGGDDLNVKRCEIINERPFKVTGVLADGRCLFRAIAHGACLRSGEEVPDEERQRELAD 215
GG DL + + R +KV V DG CLFRA+ G LR + + + +
Sbjct: 590 GGNADRDLEI----LARRRGYKVIPVKGDGNCLFRAV--GKSLRLNQNI------KYSHE 637
Query: 216 ELRAQVVDELLKRRKETEWFIE-----GD---------FDTYVKEIQQPYVWGGEPELLM 261
+LRAQVV L ++ E ++E GD + Y+K I +P WG L +
Sbjct: 638 DLRAQVVTYLTSHKEFLEPYLEYVTESGDTTPQEYAKNVERYIKNISKPGTWGDFICLRV 697
Query: 262 ASHVLKKPIAVFMVVQSSGNLVNIAN 287
S +LK + +++ ++ N I+N
Sbjct: 698 LSEILK--VKFNLLILNTRNFQVISN 721
>sp|Q7RTX8|HIN1L_HUMAN Putative HIN1-like protein OS=Homo sapiens GN=HIN1L PE=5 SV=1
Length = 443
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 56/133 (42%), Gaps = 19/133 (14%)
Query: 181 VLADGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDELLKRRKETEWFIEGDF 240
V DG CLFRA+A V E+R + L + R++ E I G F
Sbjct: 39 VAKDGSCLFRAVAEQVLHSQSRHV-----------EVRMACIHCLRENREKFEAIIGGSF 87
Query: 241 DTYVKEIQQPYVWGGEPELLMASHVLKKPIAVFMVVQSSGNLVNIANYGEEYQKDKESPI 300
+ Y+K ++ P W G+ E+ S + +K + S + V N+ E+ +
Sbjct: 88 EGYLKRLENPQEWVGQMEISALSLMYRKDFITNLEPNVSPSQVTENNFPEK--------V 139
Query: 301 NVLFHGYGHYDIL 313
+ F HYDI+
Sbjct: 140 LLCFSNGNHYDIV 152
>sp|Q7ZX21|OTU5A_XENLA OTU domain-containing protein 5-A OS=Xenopus laevis GN=otud5-a PE=2
SV=1
Length = 513
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 65/144 (45%), Gaps = 17/144 (11%)
Query: 170 IINERPFKVTGVLADGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDELLKRR 229
+ +++ F + + DG CLFRA+A ++V ++ E+ +R +D L+K
Sbjct: 160 LSDKKGFIIKQMKEDGACLFRAVA--------DQVYGDQDMHEV---VRKHCMDYLMKNA 208
Query: 230 KETEWFIEGDFDTYVKEIQQPYVWGGEPELLMASHVLKKPIAVFMVVQSSGNLVNIANYG 289
++ DF TY+ ++ G E+ + + +P+ V+ N +
Sbjct: 209 DYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYGTEPINTFH----- 263
Query: 290 EEYQKDKESPINVLFHGYGHYDIL 313
QK+++ PI V +H HY+ +
Sbjct: 264 -GIQKNEDEPIRVSYHRNIHYNSV 286
>sp|Q96G74|OTUD5_HUMAN OTU domain-containing protein 5 OS=Homo sapiens GN=OTUD5 PE=1 SV=1
Length = 571
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 61/136 (44%), Gaps = 12/136 (8%)
Query: 176 FKVTGVLADGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDELLKRRKETEWF 235
F + + DG CLFRA+A ++V ++ E+ +R +D L+K +
Sbjct: 213 FIIKQMKEDGACLFRAVA--------DQVYGDQDMHEV---VRKHCMDYLMKNADYFSNY 261
Query: 236 IEGDFDTYVKEIQQPYVWGGEPELLMASHVLKKPIAVFMVVQSSGNLVNIANYGEEYQKD 295
+ DF TY+ ++ G E+ + + +P+ V+ + + I + +Q +
Sbjct: 262 VTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTGTSAVEPINTFHGIHQNE 321
Query: 296 KESPINVLFHGYGHYD 311
E PI V +H HY+
Sbjct: 322 DE-PIRVSYHRNIHYN 336
>sp|Q8N6M0|OTU6B_HUMAN OTU domain-containing protein 6B OS=Homo sapiens GN=OTUD6B PE=1
SV=1
Length = 293
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 37/163 (22%)
Query: 166 KRCEIINERPFKVTGVLADGRCLFRAIAHG----------ACLRSGEEVPDEERQRELAD 215
K +I+ R ++ + +DG C+++AI LRS + A+
Sbjct: 137 KLAQILAARQLEIKQIPSDGHCMYKAIEDQLKEKDCALTVVALRS-----------QTAE 185
Query: 216 ELRAQVVDEL--LKRRKETEWFIEGDFDTYVKEIQQPYVWGGEPELLMASHVLKKPIAVF 273
+++ V D L L + + +F Y ++I WGG+ EL SH+L+ PI
Sbjct: 186 YMQSHVEDFLPFLTNPNTGDMYTPEEFQKYCEDIVNTAAWGGQLELRALSHILQTPIE-- 243
Query: 274 MVVQSSGNLVNIANYGEEYQKDKESPINVLF--HGYG---HYD 311
++Q+ + + GEEY K P+ +++ H YG HY+
Sbjct: 244 -IIQADSPPIIV---GEEYSK---KPLILVYMRHAYGLGEHYN 279
>sp|Q640H3|OTU5B_XENLA OTU domain-containing protein 5-B OS=Xenopus laevis GN=otud5-b PE=2
SV=1
Length = 518
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 17/138 (12%)
Query: 176 FKVTGVLADGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDELLKRRKETEWF 235
F + + DG CLFRA+A ++V ++ E+ +R +D L+K +
Sbjct: 171 FIIKQMKEDGACLFRAVA--------DQVYGDQDMHEV---VRKHCMDYLMKNADYFSNY 219
Query: 236 IEGDFDTYVKEIQQPYVWGGEPELLMASHVLKKPIAVFMVVQSSGNLVNIANYGEEYQKD 295
+ DF TY+ ++ G E+ + + +P+ V+ N + Q++
Sbjct: 220 VTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYGTEPINTFH------GIQQN 273
Query: 296 KESPINVLFHGYGHYDIL 313
++ PI V +H HY+ +
Sbjct: 274 EDEPIRVSYHRNIHYNSV 291
>sp|Q6GL44|OTUD5_XENTR OTU domain-containing protein 5 OS=Xenopus tropicalis GN=otud5 PE=2
SV=1
Length = 518
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 17/138 (12%)
Query: 176 FKVTGVLADGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDELLKRRKETEWF 235
F + + DG CLFRA+A ++V ++ E+ +R +D L+K +
Sbjct: 171 FIIKQMKEDGACLFRAVA--------DQVYGDQDMHEV---VRKHCMDYLMKNADYFSNY 219
Query: 236 IEGDFDTYVKEIQQPYVWGGEPELLMASHVLKKPIAVFMVVQSSGNLVNIANYGEEYQKD 295
+ DF TY+ ++ G E+ + + +P+ V+ N + Q++
Sbjct: 220 VTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYGTEPINTFH------GIQQN 273
Query: 296 KESPINVLFHGYGHYDIL 313
++ PI V +H HY+ +
Sbjct: 274 EDEPIRVSYHRNIHYNSV 291
>sp|P10383|OTU_DROME Protein ovarian tumor locus OS=Drosophila melanogaster GN=otu PE=2
SV=2
Length = 853
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 19/128 (14%)
Query: 184 DGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDELLKRRKETEWFIEGDFDTY 243
D LFR IA E++ D + L E+R + V + +R+ E I GDFD+Y
Sbjct: 37 DASSLFRVIA--------EQMYDTQM---LHYEIRLECVRFMTLKRRIFEKEIPGDFDSY 85
Query: 244 VKEIQQPYVWGGEPELLMASHVLKKPIAVFMVVQSSGNLVNIANYGEEYQKDKESPINVL 303
++++ +P +G EL S + ++ + ++ ++V Y E ++ V
Sbjct: 86 MQDMSKPKTYGTMTELRAMSCLYRRNVILYEPYNMGTSVVFNRRYAENFR--------VF 137
Query: 304 FHGYGHYD 311
F+ H+D
Sbjct: 138 FNNENHFD 145
>sp|Q2YDU3|OTUD5_RAT OTU domain-containing protein 5 OS=Rattus norvegicus GN=Otud5 PE=2
SV=2
Length = 566
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 17/136 (12%)
Query: 176 FKVTGVLADGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDELLKRRKETEWF 235
F + + DG CLFRA+A ++V ++ E+ +R +D L+K +
Sbjct: 213 FIIKQMKEDGACLFRAVA--------DQVYGDQDMHEV---VRKHCMDYLMKNADYFSNY 261
Query: 236 IEGDFDTYVKEIQQPYVWGGEPELLMASHVLKKPIAVFMVVQSSGNLVNIANYGEEYQKD 295
+ DF TY+ ++ G E+ + + +P+ V+ Q S +N + ++
Sbjct: 262 VTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVY---QYSTEPINTFH---GIHQN 315
Query: 296 KESPINVLFHGYGHYD 311
++ PI V +H HY+
Sbjct: 316 EDEPIRVSYHRNIHYN 331
>sp|Q3U2S4|OTUD5_MOUSE OTU domain-containing protein 5 OS=Mus musculus GN=Otud5 PE=1 SV=2
Length = 566
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 17/136 (12%)
Query: 176 FKVTGVLADGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDELLKRRKETEWF 235
F + + DG CLFRA+A ++V ++ E+ +R +D L+K +
Sbjct: 213 FIIKQMKEDGACLFRAVA--------DQVYGDQDMHEV---VRKHCMDYLMKNADYFSNY 261
Query: 236 IEGDFDTYVKEIQQPYVWGGEPELLMASHVLKKPIAVFMVVQSSGNLVNIANYGEEYQKD 295
+ DF TY+ ++ G E+ + + +P+ V+ Q S +N + ++
Sbjct: 262 VTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVY---QYSTEPINTFH---GIHQN 315
Query: 296 KESPINVLFHGYGHYD 311
++ PI V +H HY+
Sbjct: 316 EDEPIRVSYHRNIHYN 331
>sp|Q08BW0|OTU5A_DANRE OTU domain-containing protein 5-A OS=Danio rerio GN=otud5a PE=2
SV=1
Length = 560
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 17/138 (12%)
Query: 176 FKVTGVLADGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDELLKRRKETEWF 235
F + + DG CLFRA+A ++V ++ E+ +R +D L+K +
Sbjct: 211 FVIKKMKEDGACLFRAVA--------DQVYGDQDMHEV---VRKHCMDYLMKNADYFSNY 259
Query: 236 IEGDFDTYVKEIQQPYVWGGEPELLMASHVLKKPIAVFMVVQSSGNLVNIANYGEEYQKD 295
+ DF TY+ ++ G E+ + + +P+ V+ QS +N +G ++
Sbjct: 260 VTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVY---QSGTEPINTF-HG--IHQN 313
Query: 296 KESPINVLFHGYGHYDIL 313
+ PI V +H HY+ +
Sbjct: 314 NDEPIRVSYHRNIHYNSV 331
>sp|Q5ZIP6|OTU6B_CHICK OTU domain-containing protein 6B OS=Gallus gallus GN=OTUD6B PE=2
SV=1
Length = 302
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 37/170 (21%)
Query: 166 KRCEIINERPFKVTGVLADGRCLFRAIAHG----------ACLRSGEEVPDEERQRELAD 215
K ++ R ++ + +DG C++RAI A LR+ + A
Sbjct: 146 KLASLLAARHLEIKQIPSDGHCMYRAIEDQLKDHHNSWTVATLRN-----------QTAK 194
Query: 216 ELRAQVVDEL--LKRRKETEWFIEGDFDTYVKEIQQPYVWGGEPELLMASHVLKKPIAVF 273
+ + D L L + + + +F+ Y +I WGG+ EL SH+L+ PI V
Sbjct: 195 YIHSHFDDFLPFLTNPNTGDMYSKEEFEKYCDDIANTAAWGGQLELRALSHILQTPIEV- 253
Query: 274 MVVQSSGNLVNIANYGEEYQKDKESPINVLF--HGYG---HYDILETFSE 318
V S +++ GEEY PI +++ H YG HY+ ++ ++
Sbjct: 254 -VQMDSPSII----VGEEYSG---KPIILVYMRHAYGLGEHYNSVKLLTD 295
>sp|Q8K2H2|OTU6B_MOUSE OTU domain-containing protein 6B OS=Mus musculus GN=Otud6b PE=2
SV=1
Length = 294
Score = 39.3 bits (90), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 166 KRCEIINERPFKVTGVLADGRCLFRAIAHGACLRSGE-EVPDEERQRELADELRAQVVDE 224
K +I+ R ++ + +DG C++ A+ LR + + +R+ A+ ++ D
Sbjct: 138 KLAQILAARELEIKQIPSDGHCMYGALEDQ--LREQDCALTVASLRRQTAEYMQTHSDDF 195
Query: 225 L--LKRRKETEWFIEGDFDTYVKEIQQPYVWGGEPELLMASHVLKKPIAVFMVVQSSGNL 282
L L + + +F Y +I WGG+ EL SH+L+ PI + Q+
Sbjct: 196 LPFLTNPSTGDMYTPEEFGKYCDDIVNTAAWGGQLELRALSHILQTPIEIL---QADAPP 252
Query: 283 VNIANYGEEYQKDKESPINVLF--HGYG---HYD 311
+ + GEEY ++ P+ +++ H YG HY+
Sbjct: 253 IIV---GEEYPRN---PLVLVYMRHAYGLGEHYN 280
>sp|Q5T2D3|OTUD3_HUMAN OTU domain-containing protein 3 OS=Homo sapiens GN=OTUD3 PE=1 SV=1
Length = 398
Score = 38.5 bits (88), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 24/130 (18%)
Query: 176 FKVTGVLADGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDELLKRRKETEWF 235
K+ V DG CLFRA+ G+++ R + R + VD ++K+R++ E F
Sbjct: 65 LKLREVPGDGNCLFRAL--------GDQLEGHSRNHL---KHRQETVDYMIKQREDFEPF 113
Query: 236 IEGD--FDTYVKEIQQPYVWGGEP---------ELLMASHVLKKPI-AVFMVVQSSGNLV 283
+E D F+ +V + +P + G +L + H L P+ + +SS +
Sbjct: 114 VEDDIPFEKHVASLAKPGTFAGNDAIVAFARNHQLNVVIHQLNAPLWQIRGTEKSSVREL 173
Query: 284 NIA-NYGEEY 292
+IA YGE Y
Sbjct: 174 HIAYRYGEHY 183
>sp|Q9CUB6|OTUD1_MOUSE OTU domain-containing protein 1 OS=Mus musculus GN=Otud1 PE=2 SV=2
Length = 454
Score = 38.1 bits (87), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 11/86 (12%)
Query: 181 VLADGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDELLKRRKETEWFIEGDF 240
++ DG CL+RA++ G++ L ELR Q V + IEGD
Sbjct: 287 IIPDGNCLYRAVSKTVY---GDQ--------SLHRELREQTVHYIADHLDHFSPLIEGDV 335
Query: 241 DTYVKEIQQPYVWGGEPELLMASHVL 266
++ Q W G PELL +L
Sbjct: 336 GEFIIAAAQDGAWAGYPELLAMGQML 361
>sp|Q5VV17|OTUD1_HUMAN OTU domain-containing protein 1 OS=Homo sapiens GN=OTUD1 PE=2 SV=1
Length = 481
Score = 37.7 bits (86), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 11/86 (12%)
Query: 181 VLADGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDELLKRRKETEWFIEGDF 240
++ DG CL+RA++ G++ L ELR Q V + IEGD
Sbjct: 314 IIPDGNCLYRAVSKTV---YGDQ--------SLHRELREQTVHYIADHLDHFSPLIEGDV 362
Query: 241 DTYVKEIQQPYVWGGEPELLMASHVL 266
++ Q W G PELL +L
Sbjct: 363 GEFIIAAAQDGAWAGYPELLAMGQML 388
>sp|P43558|OTU1_YEAST Ubiquitin thioesterase OTU1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=OTU1 PE=1 SV=1
Length = 301
Score = 36.6 bits (83), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 69/150 (46%), Gaps = 25/150 (16%)
Query: 173 ERPFKVTGVLADGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDELLKR-RKE 231
E V VL D CLF AIA+G +Q + D LR V E+L K
Sbjct: 106 ENVLSVHPVLDDNSCLFHAIAYGIF-----------KQDSVRD-LREMVSKEVLNNPVKF 153
Query: 232 TEWFIEGDFDTYVKEIQQPYVWGGEPELLMASHVLKKPIAVFMVVQSSGNLVNIANYGEE 291
+ ++ Y + I + WGG E+ + S L +A+++V + + E+
Sbjct: 154 NDAILDKPNKDYAQWILKMESWGGAIEIGIISDAL--AVAIYVVDIDAVKI-------EK 204
Query: 292 YQKDK-ESPINVLFHGYGHYDILETFSEQK 320
+ +DK ++ I +LF+G HYD L T +E K
Sbjct: 205 FNEDKFDNYILILFNGI-HYDSL-TMNEFK 232
>sp|Q9NP73|ALG13_HUMAN UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Homo
sapiens GN=ALG13 PE=1 SV=2
Length = 1137
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 48/128 (37%), Gaps = 19/128 (14%)
Query: 184 DGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDELLKRRKETEWFIEGDFDTY 243
D CLFRAI+ + E+R V + + ++ E ++EG F+ Y
Sbjct: 239 DASCLFRAISEQLFCSQVHHL-----------EIRKACVSYMRENQQTFESYVEGSFEKY 287
Query: 244 VKEIQQPYVWGGEPELLMASHVLKKPIAVFMVVQSSGNLVNIANYGEEYQKDKESPINVL 303
++ + P G+ E+ S + + ++ V Y E I +
Sbjct: 288 LERLGDPKESAGQLEIRALSLIYNRDFILYRFPGKPPTYVTDNGY--------EDKILLC 339
Query: 304 FHGYGHYD 311
+ GHYD
Sbjct: 340 YSSSGHYD 347
>sp|Q6BIS1|TRXB_DEBHA Thioredoxin reductase OS=Debaryomyces hansenii (strain ATCC 36239 /
CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=TRR1 PE=3
SV=1
Length = 321
Score = 32.3 bits (72), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 282 LVNIANYGEEYQKDKESPINVLFHGYGHYDILETFSEQ 319
L NI+ Y + ++ K+ P+N LF+ GH + F++Q
Sbjct: 223 LQNISVYNNKTKETKDLPVNGLFYAIGHIPATQIFAKQ 260
>sp|Q9D8C3|ALG13_MOUSE UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Mus
musculus GN=Alg13 PE=2 SV=2
Length = 1166
Score = 32.0 bits (71), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/93 (21%), Positives = 39/93 (41%), Gaps = 11/93 (11%)
Query: 181 VLADGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDELLKRRKETEWFIEGDF 240
V D CLFRAI+ + ++R V + + ++ E ++EG F
Sbjct: 230 VAKDASCLFRAISEQLFHSQIHHL-----------QIRRACVSYMKENQQAFESYVEGSF 278
Query: 241 DTYVKEIQQPYVWGGEPELLMASHVLKKPIAVF 273
+ Y++ + P G+ EL S + + ++
Sbjct: 279 EKYLERLGDPKESAGQLELKALSLIYNRDFIIY 311
>sp|Q6NGZ4|SYD_CORDI Aspartate--tRNA ligase OS=Corynebacterium diphtheriae (strain ATCC
700971 / NCTC 13129 / Biotype gravis) GN=aspS PE=3 SV=1
Length = 601
Score = 31.6 bits (70), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 6/74 (8%)
Query: 128 APIEYWTDSNDSNPETVTFYEEKISKIDGGGGGDDLNVKRCEIINERPFKVTGVLADGR- 186
+P W DS D NP T Y I GG + + R + + ER FKV G+ D
Sbjct: 460 SPKPEWLDSFDENPGEATAYAYDIVCNGNEIGGGSIRIHRRD-VQERVFKVMGITEDEAR 518
Query: 187 ----CLFRAIAHGA 196
L A A GA
Sbjct: 519 EKFGFLLDAFAFGA 532
>sp|B6JM26|TIG_HELP2 Trigger factor OS=Helicobacter pylori (strain P12) GN=tig PE=3 SV=1
Length = 451
Score = 31.6 bits (70), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 182 LADGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDELLKRRKETEWFIEGDFD 241
LA LF+ H +R E+ DE + LA+E A + +LLK R E + F+E
Sbjct: 230 LAGKEALFKVKLHQIQVREALEINDELAKIVLANEENATL--KLLKERVEGQLFLENKAR 287
Query: 242 TYVKEIQQPYV 252
Y +E+++ +
Sbjct: 288 LYNEELKEKLI 298
>sp|Q9UUK3|OTU2_SCHPO Ubiquitin thioesterase otu2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=otu2 PE=4 SV=1
Length = 324
Score = 31.6 bits (70), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 15/115 (13%)
Query: 166 KRCEIINERPFKVTGVLADGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDEL 225
K +I+ E + ADG CLF +I+H ++ + LR + D +
Sbjct: 175 KFSKILEEAGLVAVDIPADGNCLFASISHQLNYHHNVKLN--------SQALRNKSADYV 226
Query: 226 LKRRKETEWFIEGD-------FDTYVKEIQQPYVWGGEPELLMASHVLKKPIAVF 273
LK ++ E F+ + Y EI+ WG + E+ ++ L+ P+ V+
Sbjct: 227 LKHCEQFEGFLLDEESGEVLPVSDYCNEIRNNSKWGSDIEIQALANSLEVPVHVY 281
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 136,184,454
Number of Sequences: 539616
Number of extensions: 6197200
Number of successful extensions: 16293
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 16241
Number of HSP's gapped (non-prelim): 53
length of query: 320
length of database: 191,569,459
effective HSP length: 117
effective length of query: 203
effective length of database: 128,434,387
effective search space: 26072180561
effective search space used: 26072180561
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)