Query 020876
Match_columns 320
No_of_seqs 133 out of 949
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 09:29:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020876.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020876hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pfy_A OTU domain-containing p 100.0 7.8E-35 2.7E-39 260.2 10.1 134 166-316 49-182 (185)
2 3by4_A OTU1, ubiquitin thioest 100.0 2.3E-32 7.8E-37 248.2 11.5 126 172-318 16-142 (212)
3 3phx_A RNA-directed RNA polyme 100.0 2.1E-31 7.2E-36 237.6 13.1 133 175-318 30-162 (185)
4 3phu_A RNA-directed RNA polyme 100.0 1.1E-30 3.7E-35 239.0 14.5 134 175-319 30-163 (219)
5 2zfy_A Ubiquitin thioesterase 99.9 1.6E-26 5.4E-31 212.3 15.3 162 149-315 15-234 (234)
6 1tff_A Ubiquitin thiolesterase 99.9 8.4E-27 2.9E-31 214.4 13.3 161 149-318 13-233 (234)
7 4dhi_B Ubiquitin thioesterase 99.9 3.4E-26 1.2E-30 216.3 14.1 168 149-318 48-276 (284)
8 4ddg_A Ubiquitin-conjugating e 99.9 2E-24 6.9E-29 211.4 12.9 160 150-315 181-399 (399)
9 3dkb_A Tumor necrosis factor, 98.3 3.2E-06 1.1E-10 82.5 11.1 132 175-318 111-285 (390)
10 3zrh_A Ubiquitin thioesterase 98.2 8.1E-06 2.8E-10 80.8 11.6 133 175-319 188-352 (454)
11 3quf_A Extracellular solute-bi 45.2 4.5 0.00015 37.2 0.0 10 49-58 10-19 (414)
12 1zxt_A ORF K6, VMIP-I, functio 40.7 9.4 0.00032 28.8 1.2 26 5-30 50-76 (76)
13 2nl9_A Fusion protein consisti 32.9 46 0.0016 27.9 4.4 56 212-267 38-105 (157)
14 2w3l_A BCL2-XL, apoptosis regu 30.9 68 0.0023 26.4 5.1 55 212-266 30-95 (144)
15 4hw4_A Induced myeloid leukemi 30.2 60 0.0021 27.5 4.7 58 211-268 37-106 (157)
16 2vof_A BCL-2-related protein A 28.1 55 0.0019 27.5 4.1 56 212-267 37-105 (157)
17 1r2d_A Apoptosis regulator BCL 24.2 81 0.0028 28.4 4.6 56 211-266 84-150 (218)
18 3pk1_A Induced myeloid leukemi 23.6 99 0.0034 27.1 5.0 58 211-268 70-139 (189)
19 4aq3_A Apoptosis regulator BCL 23.2 74 0.0025 27.3 4.0 55 212-266 54-119 (169)
20 2ims_A Apoptosis regulator BAK 22.9 65 0.0022 27.4 3.6 55 212-266 58-123 (171)
21 1f16_A Protein (apoptosis regu 21.7 1.9E+02 0.0065 25.1 6.5 54 211-266 57-120 (192)
22 3rdy_A BWI-1=protease inhibito 20.5 21 0.00072 27.5 0.0 8 24-31 4-11 (79)
No 1
>3pfy_A OTU domain-containing protein 5; structural genomics, structural genomics consortium, SGC, PE C65 otubain, hydrolase; HET: MSE PG4; 1.70A {Homo sapiens} PDB: 3tmp_A* 3tmo_A*
Probab=100.00 E-value=7.8e-35 Score=260.24 Aligned_cols=134 Identities=22% Similarity=0.446 Sum_probs=97.8
Q ss_pred chhhhhhcCCcEEEEeCCCCchhhHHHHHHHHhcCCCCCChhHHHHHHHHHHHHHHHHHHhhChhhhhhhhccCHHHHHH
Q 020876 166 KRCEIINERPFKVTGVLADGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDELLKRRKETEWFIEGDFDTYVK 245 (320)
Q Consensus 166 ~~~~~l~~~gl~v~~IpGDGNCLFRAVA~qL~~~~G~~~~d~~l~q~~h~eLRq~vvdyI~~n~d~Fe~FIe~sfeeY~~ 245 (320)
+....++++||+++.||||||||||||++||+ |. +..|.+||+.||+||++|+++|++||+++|++||+
T Consensus 49 ~~~~l~~~~gL~~~~I~~DGnCLFrAia~qL~---g~--------~~~h~~LR~~vv~yi~~n~d~f~~Fv~~~~e~Y~~ 117 (185)
T 3pfy_A 49 FEKALRDKKGFIIKQMKEDGACLFRAVADQVY---GD--------QDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYIN 117 (185)
T ss_dssp HHHHHHHHHCCEEECCCCSTTHHHHHHHHHHH---SC--------GGGHHHHHHHHHHHHHHTHHHHTTCC---------
T ss_pred HHHHHHHHCCcEEEeeCCCCChHHHHHHHHHh---CC--------chHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 45555578999999999999999999999999 32 24789999999999999999999999999999999
Q ss_pred hhcCCCcccCHHHHHHHHHhcCCCEEEEEeecCCCceeeEEecCCcccCCCCCcEEEEEcCCCcceeeecC
Q 020876 246 EIQQPYVWGGEPELLMASHVLKKPIAVFMVVQSSGNLVNIANYGEEYQKDKESPINVLFHGYGHYDILETF 316 (320)
Q Consensus 246 rM~k~g~WGG~lEL~ALA~~l~v~I~Vy~~d~~~~~lv~I~~fG~e~~~~~~~pI~LlY~~~GHYDSL~~~ 316 (320)
+|+++++|||++||+|||++|+++|.||+.+.. + +.|. .|.+.. ...+|.|+|++.+|||||+..
T Consensus 118 ~m~~~~~WGg~iEL~AlS~~~~v~I~V~~~~~~--~-i~i~-~g~~~~--~~~~I~L~Y~~~~HYnSv~~p 182 (185)
T 3pfy_A 118 RKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTE--P-INTF-HGIHQN--EDEPIRVSYHRNIHYNSVVNP 182 (185)
T ss_dssp --------CCHHHHHHHHHHHTSCEEEESSCSS--C-SEEE-CTTSCC--TTSCEEEEEETTTEEEEEECC
T ss_pred HhhCCCccchHHHHHHHHHhhCCcEEEEECCCC--C-eEEe-cCccCC--CCCEEEEEECCCCCcccccCC
Confidence 999999999999999999999999999997643 2 2222 243321 368999999988899999875
No 2
>3by4_A OTU1, ubiquitin thioesterase OTU1; ubiquitin hydrolase, deubiquitinase, cell cycle, hydrolase; 1.55A {Saccharomyces cerevisiae} PDB: 3c0r_A
Probab=99.97 E-value=2.3e-32 Score=248.20 Aligned_cols=126 Identities=29% Similarity=0.425 Sum_probs=108.6
Q ss_pred hcCCcEEEEeCCCCchhhHHHHHHHHhcCCCCCChhHHHHHHHHHHHHHHHHHHhhChhhhh-hhhccCHHHHHHhhcCC
Q 020876 172 NERPFKVTGVLADGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDELLKRRKETE-WFIEGDFDTYVKEIQQP 250 (320)
Q Consensus 172 ~~~gl~v~~IpGDGNCLFRAVA~qL~~~~G~~~~d~~l~q~~h~eLRq~vvdyI~~n~d~Fe-~FIe~sfeeY~~rM~k~ 250 (320)
...+|.++.|||||||||||||+|| ... ..|.+||+.|++||++|+++|. .|++++|++||++|+++
T Consensus 16 ~~~~l~~~~i~~DGnCLFrAva~qL-~~~-----------~~~~~lR~~vv~yi~~n~d~f~e~~~~~~~e~Y~~~m~~~ 83 (212)
T 3by4_A 16 GENVLSVHPVLDDNSCLFHAIAYGI-FKQ-----------DSVRDLREMVSKEVLNNPVKFNDAILDKPNKDYAQWILKM 83 (212)
T ss_dssp CCSEEEEECCCCSTTHHHHHHHHHH-HSS-----------CCSHHHHHHHHHHHHHCTTTTCHHHHTSCHHHHHHHTTST
T ss_pred CCCCeEEEEeCCCCchHHHHHHHHh-CCc-----------hHHHHHHHHHHHHHHHCHHHHhhhhcCCCHHHHHHHhcCC
Confidence 4457999999999999999999999 431 3588999999999999999995 67788999999999999
Q ss_pred CcccCHHHHHHHHHhcCCCEEEEEeecCCCceeeEEecCCcccCCCCCcEEEEEcCCCcceeeecCCC
Q 020876 251 YVWGGEPELLMASHVLKKPIAVFMVVQSSGNLVNIANYGEEYQKDKESPINVLFHGYGHYDILETFSE 318 (320)
Q Consensus 251 g~WGG~lEL~ALA~~l~v~I~Vy~~d~~~~~lv~I~~fG~e~~~~~~~pI~LlY~~~GHYDSL~~~~d 318 (320)
++|||++||+|||++|+++|.||+.+.. .+..||+++ ...+|.|+|++ +|||||+...+
T Consensus 84 ~~WGg~iEL~Als~~~~~~I~V~~~~~~-----~~~~~~~~~---~~~~I~L~Y~g-~HYdsl~~~~d 142 (212)
T 3by4_A 84 ESWGGAIEIGIISDALAVAIYVVDIDAV-----KIEKFNEDK---FDNYILILFNG-IHYDSLTMNEF 142 (212)
T ss_dssp TSCCCHHHHHHHHHHHTCEEEEEETTTT-----EEEEESTTT---CSEEEEEEECS-SCEEEEEETTT
T ss_pred CEEccHHHHHHHHHHHCCCEEEEECCCC-----CeEEeCCCC---CCCeEEEEEcC-CcceEEecCCC
Confidence 9999999999999999999999997532 256788765 25789999984 79999987433
No 3
>3phx_A RNA-directed RNA polymerase L; OTU domain, DE-ubiquitinase, DE-isgylase, hydrolase-protein complex; 1.60A {Crimean-congo hemorrhagic fever virus} PDB: 3phw_A 3pt2_A 3pse_A 3prp_A 3prm_A
Probab=99.97 E-value=2.1e-31 Score=237.64 Aligned_cols=133 Identities=17% Similarity=0.298 Sum_probs=110.4
Q ss_pred CcEEEEeCCCCchhhHHHHHHHHhcCCCCCChhHHHHHHHHHHHHHHHHHHhhChhhhhhhhccCHHHHHHhhcCCCccc
Q 020876 175 PFKVTGVLADGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDELLKRRKETEWFIEGDFDTYVKEIQQPYVWG 254 (320)
Q Consensus 175 gl~v~~IpGDGNCLFRAVA~qL~~~~G~~~~d~~l~q~~h~eLRq~vvdyI~~n~d~Fe~FIe~sfeeY~~rM~k~g~WG 254 (320)
.|.+.+|+||||||||||++||+.+ ..... .+..|.+||+.|++||++|+++ .+++++|++||++|+++++||
T Consensus 30 ~~~v~rv~gDGnCLFrAva~qL~~~--~~~~~---~~~~~~~LR~~~~~yi~~~~~~--~~~~~~~~~Y~~~m~~~~~WG 102 (185)
T 3phx_A 30 YFEIVRQPGDGNCFYHSIAELTMPN--KTDHS---YHYIKRLTESAARKYYQEEPEA--RLVGLSLEDYLKRMLSDNEWG 102 (185)
T ss_dssp HEEEECCCSSTTHHHHHHHHHHSTT--CCTTT---HHHHHHHHHHHHHHHGGGCTTH--HHHCCCHHHHHHHHTSTTCCC
T ss_pred CeEEEccCCCCchHHHHHHHHHhCC--Cccch---hhhHHHHHHHHHHHHHHhChHh--hhcCCCHHHHHHHhhCCCccC
Confidence 4889999999999999999999842 11111 1245999999999999999998 467899999999999999999
Q ss_pred CHHHHHHHHHhcCCCEEEEEeecCCCceeeEEecCCcccCCCCCcEEEEEcCCCcceeeecCCC
Q 020876 255 GEPELLMASHVLKKPIAVFMVVQSSGNLVNIANYGEEYQKDKESPINVLFHGYGHYDILETFSE 318 (320)
Q Consensus 255 G~lEL~ALA~~l~v~I~Vy~~d~~~~~lv~I~~fG~e~~~~~~~pI~LlY~~~GHYDSL~~~~d 318 (320)
|++||+|||++|+++|+||+.+... .++.+..||++.. ..+|+|+|++.+|||+|+++.+
T Consensus 103 g~iEL~Als~~~~v~I~V~~~d~~~-~~~~i~~f~~~~~---~~~I~L~Y~g~~HYdsl~~~~~ 162 (185)
T 3phx_A 103 STLEASMLAKEMGITIIIWTVAASD-EVEAGIKFGDGDV---FTAVNLLHSGQTHFDALRILPQ 162 (185)
T ss_dssp BHHHHHHHHHHHCCCEEEEEC--CC-BCCEEEEESSCCT---TTSEEEEEETTTEEEEEEECGG
T ss_pred cHHHHHHHHHHHCCcEEEEEecCCC-CceEEEEcCCCCC---CCEEEEEECCCcCchhceECCC
Confidence 9999999999999999999987643 2455778987643 5899999998789999998764
No 4
>3phu_A RNA-directed RNA polymerase L; OTU domain, DE-ubiquitinase, DE-isgylase, hydrolase; 2.20A {Crimean-congo hemorrhagic fever VIRUSIBAR10200}
Probab=99.97 E-value=1.1e-30 Score=239.00 Aligned_cols=134 Identities=16% Similarity=0.286 Sum_probs=112.4
Q ss_pred CcEEEEeCCCCchhhHHHHHHHHhcCCCCCChhHHHHHHHHHHHHHHHHHHhhChhhhhhhhccCHHHHHHhhcCCCccc
Q 020876 175 PFKVTGVLADGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDELLKRRKETEWFIEGDFDTYVKEIQQPYVWG 254 (320)
Q Consensus 175 gl~v~~IpGDGNCLFRAVA~qL~~~~G~~~~d~~l~q~~h~eLRq~vvdyI~~n~d~Fe~FIe~sfeeY~~rM~k~g~WG 254 (320)
.|.+.+||||||||||||++||+.+. .... .+..|.+||+.|++||++|+++ .+++++|++||++|+++++||
T Consensus 30 ~~~V~rvpgDGnCLFrAVs~qL~~~~--~~~~---~~~~h~~LR~~va~yi~~n~d~--~~~~~~feeY~~~m~~~g~WG 102 (219)
T 3phu_A 30 YFEIVRQPGDGNCFYHSIAELTMPNK--TDHS---YHYIKRLTESAARKYYQEEPEA--RLVGLSLEDYLKRMLSDNEWG 102 (219)
T ss_dssp HEEEECCCCSSCHHHHHHHHHHCTTC--CTTT---HHHHHHHHHHHHHHHGGGCHHH--HHHCCCHHHHHHHHHSTTCCC
T ss_pred ceEEEccCCCCchHHHHHHHHHhCCC--ccch---hhhHHHHHHHHHHHHHHhChhh--hhcCCCHHHHHHHhcCCCccC
Confidence 48899999999999999999998421 1111 1245999999999999999998 467889999999999999999
Q ss_pred CHHHHHHHHHhcCCCEEEEEeecCCCceeeEEecCCcccCCCCCcEEEEEcCCCcceeeecCCCC
Q 020876 255 GEPELLMASHVLKKPIAVFMVVQSSGNLVNIANYGEEYQKDKESPINVLFHGYGHYDILETFSEQ 319 (320)
Q Consensus 255 G~lEL~ALA~~l~v~I~Vy~~d~~~~~lv~I~~fG~e~~~~~~~pI~LlY~~~GHYDSL~~~~d~ 319 (320)
|++||+|||++|+++|+||+.+.+ +....+..||++.. ..+|+|+|++.+|||+|+++.+.
T Consensus 103 G~iEL~AlS~~~~v~I~V~~~d~~-g~~~~i~~fge~~~---~~~I~L~Y~g~~HYdSL~~~~d~ 163 (219)
T 3phu_A 103 STLEASMLAKEMGITIIIWTVAAS-DEVEAGIKFGDGDV---FTAVNLLHSGQTHFDALRILPQF 163 (219)
T ss_dssp CHHHHHHHHHHTTCCEEEEEESSS-SBEEEEEEESSCCT---TTSEEEEEETTTEEEEEEECTTT
T ss_pred CHHHHHHHHHHhCCCEEEEEecCC-CCceeEEEecCCCC---CCeEEEEECCCcCchhheECCCC
Confidence 999999999999999999998754 22455778987643 68999999987899999998653
No 5
>2zfy_A Ubiquitin thioesterase OTUB1; otubain, structural genomics, structural genomics consortium, SGC, alternative splicing, hydrolase, immune response; 1.69A {Homo sapiens} PDB: 4ddg_B 4ddi_A
Probab=99.94 E-value=1.6e-26 Score=212.33 Aligned_cols=162 Identities=21% Similarity=0.301 Sum_probs=126.4
Q ss_pred cccccccCC-CCCCccccchhhhhhcCCcEEEEeCCCCchhhHHHHHHHHhc------------------------CCCC
Q 020876 149 EKISKIDGG-GGGDDLNVKRCEIINERPFKVTGVLADGRCLFRAIAHGACLR------------------------SGEE 203 (320)
Q Consensus 149 ~~~~~~~~e-e~~~~~~~~~~~~l~~~gl~v~~IpGDGNCLFRAVA~qL~~~------------------------~G~~ 203 (320)
+|++.+..| .+.+..++.+...|.+..-.+++|+|||||||||++++.... -|-+
T Consensus 15 ~~~~~L~~eY~~~~~~~~~K~~~L~~~y~~~R~vRgDGNCFyRaf~f~ylE~ll~~~~e~~r~~~~~~~~~~~l~~~g~~ 94 (234)
T 2zfy_A 15 LELSVLYKEYAEDDNIYQQKIKDLHKKYSYIRKTRPDGNCFYRAFGFSHLEALLDDSKELQRFKAVSAKSKEDLVSQGFT 94 (234)
T ss_dssp EEGGGGGGGSCTTCHHHHHHHHHHTTTCCEEECBCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCHHHHHHHHccCCHHHHHHHHHHHHhccceeeccCCccHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 478888888 556788888888888775569999999999999999765210 0100
Q ss_pred -CC-----------------------------hhHHHHHHHHHHHHHHHHHHhhChhhhhhhhcc--CHHHHHH-hhcCC
Q 020876 204 -VP-----------------------------DEERQRELADELRAQVVDELLKRRKETEWFIEG--DFDTYVK-EIQQP 250 (320)
Q Consensus 204 -~~-----------------------------d~~l~q~~h~eLRq~vvdyI~~n~d~Fe~FIe~--sfeeY~~-rM~k~ 250 (320)
.+ ++..+......||..+++||++|+|+|++|+++ ++++||+ .+...
T Consensus 95 ~~~~edf~~~f~~ll~~i~~~~~~~~L~~~fndq~~s~~~v~~lR~lta~yi~~~~d~f~pFi~~~~~~e~yc~~~ve~~ 174 (234)
T 2zfy_A 95 EFTIEDFHNTFMDLIEQVEKQTSVADLLASFNDQSTSDYLVVYLRLLTSGYLQRESKFFEHFIEGGRTVKEFCQQEVEPM 174 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHTHHHHGGGCCSSCCHHHHHHHHTSST
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhccchHHHHHHHHHHHHHHHHCHHHHhcccCCCCCHHHHHHHHhhhH
Confidence 00 001123467789999999999999999999986 8999998 58778
Q ss_pred CcccCHHHHHHHHHhcCCCEEEEEeecCCCceeeEEecCCcccCCCCCcEEEEEcCCCcceeeec
Q 020876 251 YVWGGEPELLMASHVLKKPIAVFMVVQSSGNLVNIANYGEEYQKDKESPINVLFHGYGHYDILET 315 (320)
Q Consensus 251 g~WGG~lEL~ALA~~l~v~I~Vy~~d~~~~~lv~I~~fG~e~~~~~~~pI~LlY~~~GHYDSL~~ 315 (320)
++|||++||+|||++|+++|.|++.+++.++.+....|+++ ...+|+|+|+ +||||+|++
T Consensus 175 ~~~~~~i~i~ALa~al~v~I~V~~~d~~~~~~v~~~~f~~~----~~p~I~LlY~-pgHYdiLy~ 234 (234)
T 2zfy_A 175 CKESDHIHIIALAQALSVSIQVEYMDRGEGGTTNPHIFPEG----SEPKVYLLYR-PGHYDILYK 234 (234)
T ss_dssp TCCCCHHHHHHHHHHHTCCEEEEECC-CCSSCCEEEEESTT----CCCSEEEEEE-TTEEEEEEC
T ss_pred hhcCCHHHHHHHHHHhCCCEEEEEcCCCCCCcccceeCCCC----CCCeEEEEEC-CCCcccCCC
Confidence 99999999999999999999999998765444555667543 2467999997 689999986
No 6
>1tff_A Ubiquitin thiolesterase protein OTUB2; hydrolase; 2.10A {Homo sapiens} SCOP: d.3.1.11
Probab=99.94 E-value=8.4e-27 Score=214.42 Aligned_cols=161 Identities=17% Similarity=0.223 Sum_probs=122.4
Q ss_pred cccccccCCCCCCccccchhhhhhcCCcEEEEeCCCCchhhHHHHHH-------------------------HHhcCCCC
Q 020876 149 EKISKIDGGGGGDDLNVKRCEIINERPFKVTGVLADGRCLFRAIAHG-------------------------ACLRSGEE 203 (320)
Q Consensus 149 ~~~~~~~~ee~~~~~~~~~~~~l~~~gl~v~~IpGDGNCLFRAVA~q-------------------------L~~~~G~~ 203 (320)
+|++.+..|=..+..++.+...|.+....+++|+|||||||||++++ |... |-
T Consensus 13 ~~~~~l~~eY~~~~~~~~K~~~L~~~y~~~R~vRgDGNCFYRAf~f~ylE~ll~~~~e~~r~~~~~~~~~~~l~~~-g~- 90 (234)
T 1tff_A 13 CDILSILRDHPENRIYRRKIEELSKRFTAIRKTKGDRNCFYRALGYSYLESLLGKSREIFKFKERVLQTPNDLLAA-GF- 90 (234)
T ss_dssp BCTTHHHHSCSGGGGGHHHHHHHHHHEEEEECBCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHT-TC-
T ss_pred CCHHHHHHHhcCCHHHHHHHHHHHHhhhheeecCCCccHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc-CC-
Confidence 46777777733567888888888888667999999999999999943 3321 21
Q ss_pred CChh--------------------------------HHHHHHHHHHHHHHHHHHhhChhhhhhhhcc--CHHHHHH-hhc
Q 020876 204 VPDE--------------------------------ERQRELADELRAQVVDELLKRRKETEWFIEG--DFDTYVK-EIQ 248 (320)
Q Consensus 204 ~~d~--------------------------------~l~q~~h~eLRq~vvdyI~~n~d~Fe~FIe~--sfeeY~~-rM~ 248 (320)
++. ..+......||..++.||++|+|+|++|+++ ++++||+ .|.
T Consensus 91 -~~~~~edF~~~f~~ll~~i~~~~~~~~L~~~fnd~~~s~~iv~~lR~lta~~i~~~~d~f~pFi~~~~~~~~yC~~~ve 169 (234)
T 1tff_A 91 -EEHKFRNFFNAFYSVVELVEKDGSVSSLLKVFNDQSASDHIVQFLRLLTSAFIRNRADFFRHFIDEEMDIKDFCTHEVE 169 (234)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHTHHHHGGGSCTTSCHHHHHHHHTS
T ss_pred -chHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHhcccchhhHHHHHHHHHHHHHHHCHHHHhhhhcCCCCHHHHHHHHhh
Confidence 111 0122367789999999999999999999976 8999999 687
Q ss_pred CCCcccCHHHHHHHHHhcCCCEEEEEeecCCCceeeEEecCCcccCCCCCcEEEEEcCCCcceeeecCCC
Q 020876 249 QPYVWGGEPELLMASHVLKKPIAVFMVVQSSGNLVNIANYGEEYQKDKESPINVLFHGYGHYDILETFSE 318 (320)
Q Consensus 249 k~g~WGG~lEL~ALA~~l~v~I~Vy~~d~~~~~lv~I~~fG~e~~~~~~~pI~LlY~~~GHYDSL~~~~d 318 (320)
..++|||++||+|||++|+++|+|++.+++. ..+....|.++ +...|+|+|+ +||||+|++.+.
T Consensus 170 ~~~~~~~~iei~ALa~aL~v~I~V~~~d~~~-~~~~~~~~~~~----~~~~I~LlY~-pgHYdily~~~~ 233 (234)
T 1tff_A 170 PMATECDHIQITALSQALSIALQVEYVDEMD-TALNHHVFPEA----ATPSVYLLYK-TSHYNILYAADK 233 (234)
T ss_dssp STTCCCCHHHHHHHHHHHTCCEEEEECC--------CCCCCCC----SSCSEEEEEE-TTEEEEEEECCC
T ss_pred hhhcccccHHHHHHHHHhCCCEEEEEcCCCC-CccccccCCCC----CCCeEEEEEC-CCCceecccCCC
Confidence 8899999999999999999999999998753 22223345432 2567999997 689999998753
No 7
>4dhi_B Ubiquitin thioesterase otubain-like; ubiquitin E2 enzyme fold, ubiquitination, hydrolase-ligase C; 1.80A {Caenorhabditis elegans} PDB: 4dhj_A 4dhz_A
Probab=99.93 E-value=3.4e-26 Score=216.25 Aligned_cols=168 Identities=15% Similarity=0.170 Sum_probs=128.0
Q ss_pred cccccccCC-CCCC-ccccchhhhhhcCCcEEEEeCCCCchhhHHHHHHHHhc---CCC-------------------CC
Q 020876 149 EKISKIDGG-GGGD-DLNVKRCEIINERPFKVTGVLADGRCLFRAIAHGACLR---SGE-------------------EV 204 (320)
Q Consensus 149 ~~~~~~~~e-e~~~-~~~~~~~~~l~~~gl~v~~IpGDGNCLFRAVA~qL~~~---~G~-------------------~~ 204 (320)
.|++.+.+| .+.+ ..++.+...|.+..-.+++|+||||||||||+++.... ++. ..
T Consensus 48 ~~~~~L~~EYa~~~~~~~~~Ki~~L~~~Y~~~R~~RGDGNCFyRAf~F~ylE~Ll~~~~e~~r~~~~~~~s~~~L~~~G~ 127 (284)
T 4dhi_B 48 APFSILCAEYDNETSAAFLSKATELSEVYGEIRYIRGDGNCFYRAILVGLIEIMLKDRARLEKFIASSRDWTRTLVELGF 127 (284)
T ss_dssp EEGGGGGGCTTSCCSHHHHHHHHHHHTTEEEEECBCCSTTHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CcHHHHHHHhccCchHHHHHHHHHHHHhccceeeecCCCchhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHCCC
Confidence 367788888 4444 58999999998874449999999999999999855310 000 00
Q ss_pred C---------------------------------hhHHHHHHHHHHHHHHHHHHhhChhhhhhhhcc--CHHHHHH-hhc
Q 020876 205 P---------------------------------DEERQRELADELRAQVVDELLKRRKETEWFIEG--DFDTYVK-EIQ 248 (320)
Q Consensus 205 ~---------------------------------d~~l~q~~h~eLRq~vvdyI~~n~d~Fe~FIe~--sfeeY~~-rM~ 248 (320)
+ ++..+......||..++.||+.|+++|++||++ ++++||+ .|.
T Consensus 128 ~~~~~eDF~d~f~ell~~i~~~~~~~~~L~~~Fnd~~~S~~iv~~LRllts~yi~~~~d~f~pFi~~~~~v~~yC~~eVe 207 (284)
T 4dhi_B 128 PDWTCTDFCDFFIEFLEKIHSGVHTEEAVYTILNDDGSANYILMFFRLITSAFLKQNSEEYAPFIDEGMTVAQYCEQEIE 207 (284)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTHHHHGGGSCTTCCHHHHHHHHTS
T ss_pred chhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHhcCcccchHHHHHHHHHHHHHHHHCHHHHHhhcCCCCCHHHHHHHhce
Confidence 0 111135678899999999999999999999975 8999999 688
Q ss_pred CCCcccCHHHHHHHHHhcCCCEEEEEeecCCCceeeEEe-cCCcccCCCCCcEEEEEcCCCcceeeecCCC
Q 020876 249 QPYVWGGEPELLMASHVLKKPIAVFMVVQSSGNLVNIAN-YGEEYQKDKESPINVLFHGYGHYDILETFSE 318 (320)
Q Consensus 249 k~g~WGG~lEL~ALA~~l~v~I~Vy~~d~~~~~lv~I~~-fG~e~~~~~~~pI~LlY~~~GHYDSL~~~~d 318 (320)
..++|||++||+|||++|+++|.|+++|++.+..+..+. | ++........|.|||. +||||+||+..+
T Consensus 208 ~~~~e~d~leI~ALa~aL~v~I~V~ylDrs~g~~v~~h~~f-p~~~~~~~p~I~LLYr-pgHYDILY~~~p 276 (284)
T 4dhi_B 208 PMWKDADHLAINSLIKAAGTRVRIEYMDRTAAPNGGWHYDI-PSDDQQIAPEITLLYR-PGHYDVIYKKDS 276 (284)
T ss_dssp STTCCCCHHHHHHHHHHTTCCEEEEESSGGGCTTSSSEEEE-SCCCSCCCCSEEEEEE-TTEEEEEEECC-
T ss_pred ehhhcccHHHHHHHHHHhCCcEEEEEecCCCCCCCcccccC-CCCCCCCCCEEEEeec-CCCccccccCCC
Confidence 889999999999999999999999999976544443344 6 3322112356999996 699999999865
No 8
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=99.91 E-value=2e-24 Score=211.41 Aligned_cols=160 Identities=20% Similarity=0.266 Sum_probs=124.7
Q ss_pred ccccccCC-CCCCccccchhhhhhcCCcEEEEeCCCCchhhHHHHHHHHhcCCCCCC-----------------------
Q 020876 150 KISKIDGG-GGGDDLNVKRCEIINERPFKVTGVLADGRCLFRAIAHGACLRSGEEVP----------------------- 205 (320)
Q Consensus 150 ~~~~~~~e-e~~~~~~~~~~~~l~~~gl~v~~IpGDGNCLFRAVA~qL~~~~G~~~~----------------------- 205 (320)
|++.+..| .+.+..++.+...|.+..-.+++|+||||||||||++++... .....
T Consensus 181 ~~~~L~~eY~~~~~~~~~k~~~L~~~y~~~R~vrgDGNCFYRAf~f~ylE~-ll~~~~e~~r~~~~~~~~~~~l~~~g~~ 259 (399)
T 4ddg_A 181 ELSVLYKEYAEDDNIYQQKIKDLHKKYSYIRKTRPDGNSFYRAFGFSHLEA-LLDDSKELQRFKAVSAKSKEDLVSQGFT 259 (399)
T ss_dssp EGGGHHHHSCTTCHHHHHHHHHHHHHCSEEECBCCSSCHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHhhccChHHHHHHHHHHhhcCeeeeecCCCchHHHHHHHHHHHH-HHhChHHHHHHHHHHHHHHHHHHhcCCc
Confidence 45566666 455667888888888776679999999999999999876632 10000
Q ss_pred --------------------------------hhHHHHHHHHHHHHHHHHHHhhChhhhhhhhcc--CHHHHHH-hhcCC
Q 020876 206 --------------------------------DEERQRELADELRAQVVDELLKRRKETEWFIEG--DFDTYVK-EIQQP 250 (320)
Q Consensus 206 --------------------------------d~~l~q~~h~eLRq~vvdyI~~n~d~Fe~FIe~--sfeeY~~-rM~k~ 250 (320)
++..+......||..++.||+.|+++|++|+++ ++++||+ .|...
T Consensus 260 ~~~~edf~~~f~~ll~~i~~~~~~~~L~~~fnd~~~s~~iv~~lRllts~~i~~~~d~f~pFi~~~~~v~~yc~~~ve~~ 339 (399)
T 4ddg_A 260 EFTIEDFHNTFMDLIEQVEKQTSVADLLASFNDQSTSDYLVVYLRLLTSGYLQRESKFFEHFIEGGRTVKEFCQQEVEPM 339 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHTHHHHGGGSSSSCCHHHHHHHHTSST
T ss_pred hhhHHHHHHHHHHHHHHHHccCCHHHHHHHHhcccchhhHHHHHHHHHHHHHHHCHHHHhcccCCCCCHHHHHHHhceeH
Confidence 011123578889999999999999999999986 7999999 78888
Q ss_pred CcccCHHHHHHHHHhcCCCEEEEEeecCCCceeeEEecCCcccCCCCCcEEEEEcCCCcceeeec
Q 020876 251 YVWGGEPELLMASHVLKKPIAVFMVVQSSGNLVNIANYGEEYQKDKESPINVLFHGYGHYDILET 315 (320)
Q Consensus 251 g~WGG~lEL~ALA~~l~v~I~Vy~~d~~~~~lv~I~~fG~e~~~~~~~pI~LlY~~~GHYDSL~~ 315 (320)
++|||++||+|||++|+++|.|++.|+..+.-+....|.++ ....|.|+|. +||||+||+
T Consensus 340 ~~e~d~l~I~ALa~al~v~I~V~yld~~~~~~v~~~~~~~~----~~~~I~LLYr-PgHYDiLY~ 399 (399)
T 4ddg_A 340 CKESDHIHIIALAQALSVSIQVEYMDRGEGGTTNPHIFPEG----SEPKVYLLYR-PGHYDILYK 399 (399)
T ss_dssp TCCBCHHHHHHHHHHHTCCCEEEECSCCSSSCCCEEETTTT----CCCCCEEEEE-TBEEEEEEC
T ss_pred HhhCcHHHHHHHHHHcCCcEEEEEcCCCCCCccceeeCCCC----CCCEEEEEEc-CCccccCCC
Confidence 99999999999999999999999988754444545566433 2567999995 799999986
No 9
>3dkb_A Tumor necrosis factor, alpha-induced protein 3; OTU domain, DUB domain, apoptosis, cytoplasm, DNA-binding, hydrolase, metal-binding, nucleus; 2.50A {Homo sapiens} PDB: 2vfj_A
Probab=98.30 E-value=3.2e-06 Score=82.47 Aligned_cols=132 Identities=20% Similarity=0.284 Sum_probs=78.3
Q ss_pred CcEEEEeCCCCchhhHHHHHHHHhcCCCCCChhHHHHHHHHHHHHHHHHHHhhChh-hh-----------hhhh------
Q 020876 175 PFKVTGVLADGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDELLKRRK-ET-----------EWFI------ 236 (320)
Q Consensus 175 gl~v~~IpGDGNCLFRAVA~qL~~~~G~~~~d~~l~q~~h~eLRq~vvdyI~~n~d-~F-----------e~FI------ 236 (320)
.+....+.||||||.+|++..++ |.. +...-||++..+-|++... .| ..|.
T Consensus 111 rL~pL~t~GDGnCLLHAvSqamW---Gv~--------DrdlvLRkaL~~~L~~~~~~~fr~RW~~e~~~~q~~~~~gL~y 179 (390)
T 3dkb_A 111 KLVALKTNGDGNCLMHATSQYMW---GVQ--------DTDLVLRKALFSTLKETDTRNFKFRWQLESLKSQEFVETGLCY 179 (390)
T ss_dssp CEEEBCCCCSSCHHHHHHHHHHH---SSC--------STTCHHHHHHHHHHHHSCCHHHHHHHHHHHHCCCSSCC----C
T ss_pred ceEEEEecCCCchHHHHHhHHhc---CCC--------CHhHHHHHHHHHHHHhchHHHHHHHHHHHHHHhhhhHhhcccc
Confidence 47788899999999999999999 431 1233455555555554421 11 1121
Q ss_pred -c----cCHHHHHHhhcCCC---------cccCHHHHHHHHHhcCCCEEEEEee--cC--CCceeeEEecCCcccC---C
Q 020876 237 -E----GDFDTYVKEIQQPY---------VWGGEPELLMASHVLKKPIAVFMVV--QS--SGNLVNIANYGEEYQK---D 295 (320)
Q Consensus 237 -e----~sfeeY~~rM~k~g---------~WGG~lEL~ALA~~l~v~I~Vy~~d--~~--~~~lv~I~~fG~e~~~---~ 295 (320)
+ ..|+.-++.-..+. .==-++-+.+||++|++||+||... ++ .|+-+..+.|+.-|-. .
T Consensus 180 ~e~ew~~EW~~Iv~~Asp~~~~~~~~~~y~sLEeiHIFvLAhVLRRPIIV~~d~~lr~~~~Ge~~~Pi~f~GIYLPLlwp 259 (390)
T 3dkb_A 180 DTRNWNDEWDNLIKMASTDTPMARSGLQYNSLEEIHIFVLCNILRRPIIVISDKMLRSLESGSNFAPLKVGGIYLPLHWP 259 (390)
T ss_dssp CSSCSSHHHHHHHHHTSSCCCSSSSSCSSCCCCHHHHHHHHHHTTSCEEEEECCCCTTCCCC----CCCCCEEECCTTSC
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCcchhhhHHHHHHHHHHHHhcCCEEEEechhhccccCCCccCcCccCceecCCcCC
Confidence 1 23333333322211 1124788999999999999999643 21 1222222345533311 0
Q ss_pred ----CCCcEEEEEcCCCcceeeecCCC
Q 020876 296 ----KESPINVLFHGYGHYDILETFSE 318 (320)
Q Consensus 296 ----~~~pI~LlY~~~GHYDSL~~~~d 318 (320)
-..||.|.|.+ |||.+|..+.+
T Consensus 260 p~~C~rsPI~LgY~s-~HFsaLV~me~ 285 (390)
T 3dkb_A 260 AQECYRYPIVLGYDS-HHFVPLVTLKD 285 (390)
T ss_dssp TTSSCSSCEEEEECS-SCEEEEEEBCS
T ss_pred HHHccCCceEEEecc-Cceeeeeeccc
Confidence 15799999986 89999998764
No 10
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=98.20 E-value=8.1e-06 Score=80.80 Aligned_cols=133 Identities=23% Similarity=0.350 Sum_probs=83.1
Q ss_pred CcEEEEeCCCCchhhHHHHHHHHhcCCCCCChhHHHHHHHHHHHHHHHHHHhh-------Chhhhh---------hhh--
Q 020876 175 PFKVTGVLADGRCLFRAIAHGACLRSGEEVPDEERQRELADELRAQVVDELLK-------RRKETE---------WFI-- 236 (320)
Q Consensus 175 gl~v~~IpGDGNCLFRAVA~qL~~~~G~~~~d~~l~q~~h~eLRq~vvdyI~~-------n~d~Fe---------~FI-- 236 (320)
.+..-...||||||-+|++..++ |..=. -.-||+...+-|++ ++..++ .|.
T Consensus 188 rL~pL~t~GDGNCLLHAvSqamW---GV~Dr--------dlvLRkaL~~~L~~~~~~f~~RW~~~e~~q~q~~gL~y~ld 256 (454)
T 3zrh_A 188 RLYALWNRTAGDCLLDSVLQATW---GIYDK--------DSVLRKALHDSLHDCSHWFYTRWKDWESWYSQSFGLHFSLR 256 (454)
T ss_dssp CEEEBCCCCSSCHHHHHHHHTTT---SSCCG--------GGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred ceeEeeecCCCccHHHHHHHHhh---cccCC--------cHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcCCccccc
Confidence 47788999999999999999999 53211 22345544444443 333221 122
Q ss_pred c----cCHHHHHHhhcCCCcccCHHHHHHHHHhcCCCEEEEEeecC--C-CceeeEEecCCcccC---C----CCCcEEE
Q 020876 237 E----GDFDTYVKEIQQPYVWGGEPELLMASHVLKKPIAVFMVVQS--S-GNLVNIANYGEEYQK---D----KESPINV 302 (320)
Q Consensus 237 e----~sfeeY~~rM~k~g~WGG~lEL~ALA~~l~v~I~Vy~~d~~--~-~~lv~I~~fG~e~~~---~----~~~pI~L 302 (320)
+ ..|+.-++.-..+|+==-++.+++||++|++||+||...-- . +.-+..++||.-|-. . ...||.|
T Consensus 257 e~ewq~EW~~iv~~As~Pg~sLEeiHIFvLAhVLRRPIIV~~d~~lrs~~Ge~l~pi~f~GIYLPLlwpp~~C~rsPIvL 336 (454)
T 3zrh_A 257 EEQWQEDWAFILSLASQPGASLEQTHIFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQGVYLPLLWEQSFCWKSPIAL 336 (454)
T ss_dssp HHHHHHHHHHHHHHTTSTTCCCCHHHHHHHHHHTTSCEEEEECSSCC-----CCCCCCCCEEECCTTSCGGGSCSCCEEE
T ss_pred HHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhcCCeEEeccccccccCCCcCCCcccceeeccCcCCHHHhcCCceEE
Confidence 2 23444455555677666788899999999999999985411 0 111111234432210 0 1579999
Q ss_pred EEcCCCcceeeecCCCC
Q 020876 303 LFHGYGHYDILETFSEQ 319 (320)
Q Consensus 303 lY~~~GHYDSL~~~~d~ 319 (320)
.|.+ |||.+|..+.++
T Consensus 337 gY~~-gHFsaLV~~~~~ 352 (454)
T 3zrh_A 337 GYTR-GHFSALVAMEND 352 (454)
T ss_dssp EEET-TEEEEEEEBCCC
T ss_pred Eecc-cceeeeeecccc
Confidence 9985 899999988663
No 11
>3quf_A Extracellular solute-binding protein, family 1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Bifidobacterium longum subsp}
Probab=45.19 E-value=4.5 Score=37.20 Aligned_cols=10 Identities=20% Similarity=-0.174 Sum_probs=0.0
Q ss_pred cccccccccC
Q 020876 49 HSTACRLGVG 58 (320)
Q Consensus 49 ~~~~~~~~~~ 58 (320)
||+-|.+..+
T Consensus 10 ~~~~~~~l~~ 19 (414)
T 3quf_A 10 HSSGRENLYF 19 (414)
T ss_dssp ----------
T ss_pred ccccchhhhh
Confidence 5555655444
No 12
>1zxt_A ORF K6, VMIP-I, functional macrophage inflammatory protein 1-ALPH; chemokine fold, greek KEY motif, signaling protein; 1.70A {Human herpesvirus 8}
Probab=40.69 E-value=9.4 Score=28.85 Aligned_cols=26 Identities=23% Similarity=0.517 Sum_probs=16.8
Q ss_pred cccccC-cchhhhhhhhhccccccccc
Q 020876 5 LCARHK-PWILNSISLLAHGSFAAHHQ 30 (320)
Q Consensus 5 ~~~~~~-~~~~~~~~~~~~~~~~~~~~ 30 (320)
+||-|+ ||+-..+..+..-..|||||
T Consensus 50 vCadP~~~WVq~~ik~l~~~~~~~~~~ 76 (76)
T 1zxt_A 50 ICADPSKNWVRQLMQRLPAIAHHHHHH 76 (76)
T ss_dssp EEECTTSHHHHHHHHTSCBCCCC----
T ss_pred EeCCCChHHHHHHHHHHHhhhhcccCC
Confidence 799554 69999998776666666654
No 13
>2nl9_A Fusion protein consisting of induced myeloid LEUK differentiation protein MCL-1 homolog...; apoptosis, MCL-1, BIM; HET: MSE; 1.55A {Rattus norvegicus} PDB: 2nla_A 3d7v_A 3io9_A 3kj0_A 2pqk_A 3kj1_A 3kj2_A 3kz0_A 3mk8_A 1wsx_A 2jm6_B 2roc_A 2rod_A 2kbw_A 3mk8_B
Probab=32.86 E-value=46 Score=27.88 Aligned_cols=56 Identities=11% Similarity=0.102 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHhhChhhhhhhhc-------cC---HHHHHHhhcCCC--cccCHHHHHHHHHhcC
Q 020876 212 ELADELRAQVVDELLKRRKETEWFIE-------GD---FDTYVKEIQQPY--VWGGEPELLMASHVLK 267 (320)
Q Consensus 212 ~~h~eLRq~vvdyI~~n~d~Fe~FIe-------~s---feeY~~rM~k~g--~WGG~lEL~ALA~~l~ 267 (320)
..+..||+.+.+..++++..|..++. .+ |.+=.+.|-++| .||-=+-|.|++-.+-
T Consensus 38 ~~~~~Lr~i~dele~~~~~~f~~~~~~l~i~~~~~~~~f~~Va~elF~dGi~nWGRIValf~F~~~la 105 (157)
T 2nl9_A 38 RALETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMIHVFSDGVTNWGRIVTLISFGAFVA 105 (157)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHCCCSTTCCHHHHHHHHHHGGGSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHH
Confidence 57888999999999999999988874 22 555567777888 5999999999887653
No 14
>2w3l_A BCL2-XL, apoptosis regulator BCL-2; HET: DRO; 2.10A {Homo sapiens} PDB: 2o2f_A*
Probab=30.89 E-value=68 Score=26.36 Aligned_cols=55 Identities=20% Similarity=0.175 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHhhChhhhhhhhc------c----CHHHHHHhhcCCC-cccCHHHHHHHHHhc
Q 020876 212 ELADELRAQVVDELLKRRKETEWFIE------G----DFDTYVKEIQQPY-VWGGEPELLMASHVL 266 (320)
Q Consensus 212 ~~h~eLRq~vvdyI~~n~d~Fe~FIe------~----sfeeY~~rM~k~g-~WGG~lEL~ALA~~l 266 (320)
..+..||+...+..++++..|..++. + .|.+=.++|-++| .||--+-|.|++-.+
T Consensus 30 ~~~~~Lr~~gdele~~~~~~f~~~~~~l~i~~~~~~~~f~~Va~elF~dGinWGRIValf~F~g~l 95 (144)
T 2w3l_A 30 VVHKTLREAGDDFSRRYRRDFAEMSSGLHLTPFTARGRFATVVEELFRDGVNWGRIVAFFEFGGVM 95 (144)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHTTCCCCTTTHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCccHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 57888999999999999999977763 1 3444445555665 899999999888766
No 15
>4hw4_A Induced myeloid leukemia cell differentiation Pro 1; anti-apoptotic protein, BH3 peptides, apoptosis; 1.53A {Homo sapiens} PDB: 3kj0_A 2pqk_A 3kj1_A 3kj2_A 3kz0_A 3mk8_A 2kbw_A 4hw3_A* 4hw2_A* 3d7v_A 3io9_A 2nl9_A* 2nla_A 4g35_A* 1wsx_A 2jm6_B 2roc_A 2rod_A 3mk8_B
Probab=30.23 E-value=60 Score=27.49 Aligned_cols=58 Identities=12% Similarity=0.117 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHhhChhhhhhhhcc----------CHHHHHHhhcCCC--cccCHHHHHHHHHhcCC
Q 020876 211 RELADELRAQVVDELLKRRKETEWFIEG----------DFDTYVKEIQQPY--VWGGEPELLMASHVLKK 268 (320)
Q Consensus 211 q~~h~eLRq~vvdyI~~n~d~Fe~FIe~----------sfeeY~~rM~k~g--~WGG~lEL~ALA~~l~v 268 (320)
.+.+..||..+.+..++++..|+.++.. .|.+-++.|-++| .||-=+-|.|++-.+-+
T Consensus 37 ~~~~~~Lr~vgdele~~~~~~f~~m~~~L~it~~~a~~~F~~Va~elF~dGi~NWGRIVaLfaFgg~la~ 106 (157)
T 4hw4_A 37 RKALETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMIHVFSDGVTNWGRIVTLISFGAFVAK 106 (157)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCSHHHHHHHHHHHHHHGGGSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHhccCCccHHHHHHHHHHHHHHHH
Confidence 4678889999999999999999887741 3444456677777 89999999988766543
No 16
>2vof_A BCL-2-related protein A1; BH3, apoptosis, Pro-surviVal, mitochondrion, protein- complex; 1.8A {Mus musculus} PDB: 2vog_A 2voh_A* 2voi_A 3i1h_A 3mqp_A 2vm6_A
Probab=28.11 E-value=55 Score=27.50 Aligned_cols=56 Identities=13% Similarity=0.165 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHhhChhhhhhhhcc-----------CHHHHHHhhcCCC--cccCHHHHHHHHHhcC
Q 020876 212 ELADELRAQVVDELLKRRKETEWFIEG-----------DFDTYVKEIQQPY--VWGGEPELLMASHVLK 267 (320)
Q Consensus 212 ~~h~eLRq~vvdyI~~n~d~Fe~FIe~-----------sfeeY~~rM~k~g--~WGG~lEL~ALA~~l~ 267 (320)
..+..||....+..+++++.|..++.. .|.+=.++|-++| .||--+-|.|++-.+-
T Consensus 37 ~~~~~Lr~~~~ele~~~~~~f~~~~~~l~i~~~~~a~~~f~~Va~elF~dg~inWGRIVal~~F~g~la 105 (157)
T 2vof_A 37 QACRVLQRVAFSVQKEVEKNLKSYLDDFHVESIDTARIIFNQVMEKEFEDGIINWGRIVTIFAFGGVLL 105 (157)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHTTCCCCSHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 367889999999889999999887741 2444556777888 8999999998887763
No 17
>1r2d_A Apoptosis regulator BCL-X; monomeric, alpha-helical; 1.95A {Homo sapiens} SCOP: f.1.4.1 PDB: 2b48_A 1r2i_A 1r2h_A 1r2g_A 1r2e_A 1bxl_A 1lxl_A 1maz_A 3cva_X 1ysg_A* 1ysi_A* 1ysn_A* 2o1y_A* 2yxj_A* 3pl7_A 3qkd_A* 1g5j_A 2lp8_A* 2lpc_A
Probab=24.24 E-value=81 Score=28.45 Aligned_cols=56 Identities=20% Similarity=0.257 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHhhChhhhhhhhc------c-C---HHHHHHhhcCCC-cccCHHHHHHHHHhc
Q 020876 211 RELADELRAQVVDELLKRRKETEWFIE------G-D---FDTYVKEIQQPY-VWGGEPELLMASHVL 266 (320)
Q Consensus 211 q~~h~eLRq~vvdyI~~n~d~Fe~FIe------~-s---feeY~~rM~k~g-~WGG~lEL~ALA~~l 266 (320)
+..+..||+...+..++++..|..++. + . |.+-.+.|-++| .||--+-|.+++-.+
T Consensus 84 ~~v~~~Lr~lgdElE~~~~~~f~~m~~qL~it~~~a~~~F~~Va~elF~DGINWGRIVaLfaF~g~L 150 (218)
T 1r2d_A 84 AAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGAL 150 (218)
T ss_dssp HHHHHHHHHHHHHHHHHCCSTTHHHHHHHCCCTTCCHHHHHHHHGGGGTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 467888999999999999999988873 2 3 444445555554 899999999887655
No 18
>3pk1_A Induced myeloid leukemia cell differentiation Pro 1; BCL-2 family fold, regulation of apoptosis, mitochondri apoptosis-apoptosis regulator complex; 2.49A {Homo sapiens}
Probab=23.63 E-value=99 Score=27.14 Aligned_cols=58 Identities=12% Similarity=0.117 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHHHhhChhhhhhhhc----------cCHHHHHHhhcCCC--cccCHHHHHHHHHhcCC
Q 020876 211 RELADELRAQVVDELLKRRKETEWFIE----------GDFDTYVKEIQQPY--VWGGEPELLMASHVLKK 268 (320)
Q Consensus 211 q~~h~eLRq~vvdyI~~n~d~Fe~FIe----------~sfeeY~~rM~k~g--~WGG~lEL~ALA~~l~v 268 (320)
.+.+..||..+.+..++++..|+.++. ..|.+-++.|-++| .||-=+-|.|++-.+-+
T Consensus 70 ~~~~~~Lr~vgdEle~~~~~~F~~m~~qL~it~~~a~~~F~~Va~elF~DGi~NWGRIVaLfaFgg~La~ 139 (189)
T 3pk1_A 70 RKALETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMIHVFSDGVTNWGRIVTLISFGAFVAK 139 (189)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCSTTCCHHHHHHHHHHTTTSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHhccCCccHHHHHHHHHHHHHHHH
Confidence 467889999999999999999988874 13556567777887 79999999988766543
No 19
>4aq3_A Apoptosis regulator BCL-2, BCL-2-like protein 1; chimera; HET: 398; 2.40A {Homo sapiens} PDB: 1g5m_A 1gjh_A 1ysw_A* 2o21_A* 2o22_A*
Probab=23.20 E-value=74 Score=27.29 Aligned_cols=55 Identities=22% Similarity=0.196 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHhhChhhhhhhhc----------cCHHHHHHhhcCCC-cccCHHHHHHHHHhc
Q 020876 212 ELADELRAQVVDELLKRRKETEWFIE----------GDFDTYVKEIQQPY-VWGGEPELLMASHVL 266 (320)
Q Consensus 212 ~~h~eLRq~vvdyI~~n~d~Fe~FIe----------~sfeeY~~rM~k~g-~WGG~lEL~ALA~~l 266 (320)
..+..||....+..+++++.|..++. +.|.+-.+.|-++| .||-=+-|.|++-.+
T Consensus 54 ~v~~~Lr~igdele~~~~~~f~~~~~~L~it~~~a~~~F~~Va~elF~dGiNWGRIVaLfaF~g~L 119 (169)
T 4aq3_A 54 VVHLALRQAGDDFSRRYRGDFAEMSSQLHLTPFTARGRFATVVEELFRDGVNWGRIVAFFEFGGVM 119 (169)
T ss_dssp CHHHHHHHHHHHHHHHTHHHHHHHHHHCCCCTTTHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 57889999999999999999988763 23444456666664 899999999887555
No 20
>2ims_A Apoptosis regulator BAK; dimer; 1.48A {Homo sapiens} PDB: 2imt_A 2jcn_A 2yv6_A 3qbr_B* 2xpx_B 2jby_B 2voh_B*
Probab=22.86 E-value=65 Score=27.35 Aligned_cols=55 Identities=16% Similarity=0.125 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHhhChhhhhhhhcc----------CHHHHHHhhcCCC-cccCHHHHHHHHHhc
Q 020876 212 ELADELRAQVVDELLKRRKETEWFIEG----------DFDTYVKEIQQPY-VWGGEPELLMASHVL 266 (320)
Q Consensus 212 ~~h~eLRq~vvdyI~~n~d~Fe~FIe~----------sfeeY~~rM~k~g-~WGG~lEL~ALA~~l 266 (320)
..+..||....+..++++..|..++.. .|.+=.++|-++| .||--+-|.|++-.+
T Consensus 58 ~v~~~Lr~~gdele~~~~~~f~~m~~~l~~~~~~~~~~f~~Va~elF~dGinWGRIVal~~F~g~l 123 (171)
T 2ims_A 58 QVGRQLAIIGDDINRRYDSEFQTMLQHLQPTAENAYEYFTKIATSLFESGINWGRVVALLGFGYRL 123 (171)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHTTCCSSHHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCcccHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHH
Confidence 457789998888888999999888741 3444455666665 899999999887665
No 21
>1f16_A Protein (apoptosis regulator BAX, membrane isoform alpha); helical protein; NMR {Homo sapiens} SCOP: f.1.4.1 PDB: 2k7w_A
Probab=21.69 E-value=1.9e+02 Score=25.06 Aligned_cols=54 Identities=20% Similarity=0.237 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHhhChhhhhhhhc--------cCHHHHHHhhcCCC--cccCHHHHHHHHHhc
Q 020876 211 RELADELRAQVVDELLKRRKETEWFIE--------GDFDTYVKEIQQPY--VWGGEPELLMASHVL 266 (320)
Q Consensus 211 q~~h~eLRq~vvdyI~~n~d~Fe~FIe--------~sfeeY~~rM~k~g--~WGG~lEL~ALA~~l 266 (320)
+..+..||+. ++.|+++.+ |...+. +.|.+-.+++-++| .||--+-|.|++-.+
T Consensus 57 ~~v~~~Lr~i-gdele~~~~-~~~~~~~l~~~~a~~~F~~Va~elF~dG~inWGRIValf~F~g~L 120 (192)
T 1f16_A 57 KKLSECLKRI-GDELDSNME-LQRMIAAVDTDSPREVFFRVAADMFSDGNFNWGRVVALFYFASKL 120 (192)
T ss_dssp HHHHHHHHHH-HHHHHTCHH-HHHHHTTSCCSCHHHHHHHHHHHHTSSSSCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHHHHhHH-HHHHHHhcCcccHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 3566777764 566777754 666653 23455556777888 999999999888654
No 22
>3rdy_A BWI-1=protease inhibitor/trypsin inhibitor; serine protease inhibitor, potato inhibitor I, trypsin inhib trypsin, hydrolase inhibitor; 1.84A {Fagopyrum esculentum} SCOP: d.40.1.0 PDB: 3rdz_C
Probab=20.55 E-value=21 Score=27.45 Aligned_cols=8 Identities=38% Similarity=0.447 Sum_probs=0.0
Q ss_pred cccccccc
Q 020876 24 SFAAHHQN 31 (320)
Q Consensus 24 ~~~~~~~~ 31 (320)
|.|||||+
T Consensus 4 ~~~~~~~~ 11 (79)
T 3rdy_A 4 SHHHHHHL 11 (79)
T ss_dssp --------
T ss_pred cccchhhh
Confidence 33333333
Done!